BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000228
(1825 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359473525|ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265010 [Vitis vinifera]
Length = 2792
Score = 1035 bits (2676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/888 (58%), Positives = 650/888 (73%), Gaps = 24/888 (2%)
Query: 11 MEGKGCSSSSKKAVGFAGHTV---FSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFV 67
ME +G S+ K+A+ + FSWSLEDI + +++QVE+IPE+F + YFGS++
Sbjct: 1 MEKEG--SNKKRAIAKDSRLIELLFSWSLEDISNNDLYRNQVERIPETFGTAGHYFGSYI 58
Query: 68 FPLLEETRMQLRSGLEAMRRAPYAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYK 127
FPLLEE R ++ S +E + AP+A+V +F+E KPYG+ Y ++VD WRN S+ G+EPYK
Sbjct: 59 FPLLEEIRAEMCSSMEDIHSAPFAEVTSFDESKPYGSLLYDVKVDNWRNRFSDHGREPYK 118
Query: 128 TLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRY-KVKARNNMQVH 186
TLPGDIL+L D KPE VSDL+RVGRTWTF SVT +PDDE+E+ + Y KVK +V
Sbjct: 119 TLPGDILILTDAKPETVSDLQRVGRTWTFASVTRIPDDENEDNSSSTYFKVKISKEYEVD 178
Query: 187 DKTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWD 246
D+ ++S F I+L NI+ NKRIWN+LHM GN +I++VL +DS+V E C C V G +
Sbjct: 179 DEKQRSMFVIFLINIVTNKRIWNALHMSGNISIISEVLSSDSLVKENCCQCPVWSDGVYA 238
Query: 247 EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK 306
E F S SS LNESQ A++ CLR++ C H+ VELIWGPPGTGKTKTVS+LL LLR
Sbjct: 239 ENFPMSSSSNLNESQTKAVVTCLRKIQCNHKPSVELIWGPPGTGKTKTVSVLLFKLLRTN 298
Query: 307 CRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFE 366
RTLAC PTNVA+TE+ASRVLKL KES++ N+ C LGDIL+FGNKDRLKV
Sbjct: 299 IRTLACAPTNVAVTEVASRVLKLTKESFE-----NSLFCSLGDILIFGNKDRLKVGADIV 353
Query: 367 EIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVE-KLKEREDCNVNQSEE 425
E+YL+YR+ +L ECF PL+GWR+CF+SMID LEDCVS YHI++E +L++ + C+
Sbjct: 354 EVYLDYRVDRLIECFGPLTGWRYCFNSMIDFLEDCVSHYHIFLENELRKEKSCSNEGGST 413
Query: 426 KE--------CRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENS 477
KE E SK K F+++ R+RFK LR C+ IFCTHL K +I E +
Sbjct: 414 KEEVFMKNELSSNECGSSKKVDKSFIEFARDRFKATAGPLRRCVQIFCTHLSKDFILEQN 473
Query: 478 FQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQL-HQRRSE 536
FQ MV L LLDSF +LL +D+VV +ELEKLFSH E + + L + R E
Sbjct: 474 FQNMVDLIRLLDSFESLLSKDDVVPEELEKLFSHQ--EAVQDSSPSFSDSSNLLYMSRGE 531
Query: 537 CLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVI 596
CLSVL+ L SL++L+LP ++ ++++FCFK ASL F TASSSYKLHS +KPL+ LVI
Sbjct: 532 CLSVLKILRGSLNKLSLPSGMNEGLIKEFCFKMASLIFCTASSSYKLHSANMKPLDLLVI 591
Query: 597 DEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHS 656
DEAAQLKE ESTIPLQL GI HA+LIGDECQLPAMV SK+S EAGFGRSLFERL+SL H
Sbjct: 592 DEAAQLKECESTIPLQLPGIRHAILIGDECQLPAMVSSKVSKEAGFGRSLFERLSSLGHF 651
Query: 657 KHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGR 716
KHLLN+QYRMHPSIS FPN +FY NQILD NVKSKSY K YL+G FG+YSFIN+ G
Sbjct: 652 KHLLNVQYRMHPSISFFPNSKFYFNQILDAPNVKSKSYTKHYLSGPMFGSYSFINVRGKE 711
Query: 717 E-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYE 775
E D + S +N++EV+ VIKI++ LYK W GS QK+SIGV+SPY AQVVAI+ K+G +YE
Sbjct: 712 EHDDVGKSRKNMIEVAIVIKIVRNLYKEWSGSNQKLSIGVISPYAAQVVAIQDKLGQKYE 771
Query: 776 NKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILG 835
F+VKVK++DGFQGGEEDIIII TVR NTGGSIGF+S PQR NVALTRAR+CLWILG
Sbjct: 772 KLGNFSVKVKTVDGFQGGEEDIIIICTVRSNTGGSIGFLSNPQRTNVALTRARYCLWILG 831
Query: 836 SERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEI 883
+ERTL +SESIW LV DAK R+CFFNADE++++A A LEV E ++
Sbjct: 832 NERTLANSESIWEDLVLDAKKRKCFFNADEDKDIANAILEVKTEFDQL 879
Score = 637 bits (1643), Expect = e-179, Method: Compositional matrix adjust.
Identities = 340/729 (46%), Positives = 488/729 (66%), Gaps = 9/729 (1%)
Query: 877 SKELVEIGAESLTSTSQGG---KKEEFEFEFVKAFRSINLIHKVLNSLGRFDELLMLENG 933
SKE+ +I E L S + K EFVKAF S+ L +L DELL LE
Sbjct: 1844 SKEIGKIEQEFLESCAHHYHELKDNRKMMEFVKAFHSMESKRNFLTTLDCLDELLRLEEE 1903
Query: 934 SGNFMEAANMAVLEGDIFLATDLLQKAWNFREASKLVLNFVFSNSLWSPGSRGWPLKQFT 993
GNFMEAAN+A L G+I L ++L KA N+R+AS L L +VF+NSLW+ GSRGWPLKQF
Sbjct: 1904 LGNFMEAANIAKLSGEILLEAEMLGKAGNYRDASTLFLCYVFANSLWASGSRGWPLKQFV 1963
Query: 994 QKEELLQKAKSLAKNDSNQFYEFVCAEANILSNDHSNLVMMNQQFIDSKRHQNIRGEILS 1053
+KEELL KA+ ++ +S QFYEFVC E +ILSN+ ++L MNQ S+RH+++RGEILS
Sbjct: 1964 KKEELLTKARLFSERESKQFYEFVCMEVSILSNEQTSLFEMNQCLSTSQRHKSVRGEILS 2023
Query: 1054 SRMILDFHLHSNASTYHWEDELVLNLTTYSDDRICKSQVSIETFVYFWNCWKDKIVKIFE 1113
+R I+D HL+SN + Y W DE V +L +S+ R+ ++ +S+ET +YFWN WK+ +V IFE
Sbjct: 2024 ARKIIDAHLNSNTTKYEWTDEWVSDLKQHSEVRLSQNCISVETLLYFWNVWKENVVNIFE 2083
Query: 1114 YLGCLRVQQDVDGYRSYEDFCLSYFSVWKHCSNLDTTYLLLKSDAYWVRELSNMYVQKRG 1173
LG QDV Y SY +FC +YF V K C NL+ + LL DA W+R + + ++++ G
Sbjct: 2084 SLGLDETTQDVKNYSSYGEFCFNYFGVRKQCKNLNLIHALLIPDANWLRAVDDRFIRRTG 2143
Query: 1174 QLVSIDLHQLVSAAQSYWSTELLSVGINVLDKLEALHEQSIKNSLSVLCQSKCLSYIYDV 1233
+LV +D Q SAA+SYWS+ELLSVG VL+ LE L+ S SLS+ CQSK L ++++V
Sbjct: 2144 KLVYVDADQFASAARSYWSSELLSVGTKVLENLEVLYNYSTWKSLSLFCQSKLLVHMFEV 2203
Query: 1234 AKFLLDSEFLYRHWDDVKTLQKFVELSTEDFFRCIFPLDWRESLSKDMISLRQTEVCRSI 1293
++FLL +FL ++ +TLQKF+++ST F IFPLDW++S +++M+SLR+TE+ R++
Sbjct: 2204 SEFLLKLKFLDLRYNAARTLQKFLDISTRQFCSKIFPLDWKKSSTENMVSLRETELSRNL 2263
Query: 1294 LEEIVSGYVTSKSKLSYGQIGRIAVMILGSGKLHNGLYRKVVERCVKDSPWQAFLKCLSQ 1353
LEE++S ++ KS+ +YGQIGR+A ILG GKL LY K+ E+ + PW+AF+K LS
Sbjct: 2264 LEEVISTSISIKSEFTYGQIGRVASWILGMGKLTTELYEKIAEKFAVNPPWKAFIKNLSG 2323
Query: 1354 KMESEYLQHPSESNNERE-LYVIQKLHGALLDTYGANWRKEYDYMSPAYFLYLLERLLIL 1412
+ S + Q N R+ + ++ L GAL DTY A W + DY+SP YFLYL++RLLIL
Sbjct: 2324 NIGSGFPQDSVPINESRKHVSLVLTLDGALRDTYNAYWGQS-DYISPGYFLYLVDRLLIL 2382
Query: 1413 ISCFQGYIFTTKSSFVDWRIYQEPHTNPTASFVTDVWQSFGDVLDSIFFIVQHFLYNEKE 1472
++ FQGY FTTKSS+++W I+QE ++ P V + FG LD + +I Q LY ++
Sbjct: 2383 VTSFQGYCFTTKSSYIEWLIFQEWNSFPNPGLVANPQFPFGATLDYVAYIAQDLLYKKQV 2442
Query: 1473 MIEWISKSHKNVNNYHSLVVLRLVVIICLLHLN--FGKFGSSLRDLLGRKYVSRLLPLEF 1530
+EWI KS+ N N Y+ L+VLRLV+IICLL +N K+ L LL R ++ LLP +F
Sbjct: 2443 TVEWIRKSNINFNEYYPLLVLRLVIIICLLCVNAKHEKYVEMLFGLLRRGDITSLLPRDF 2502
Query: 1531 CDAL--RKIENHNCLNVHEISQAFKKIGNPLVIASLGKNCSQFLCPDAIFVNMKVMKSTD 1588
CD L R+ N ++V+ +++A +K+ NPLVI L +N S+ CPDAIF++M V + +
Sbjct: 2503 CDVLWRRRKRNQFDISVNVLAEALRKVDNPLVIVKLQRNSSEVSCPDAIFIDMTVNQCRE 2562
Query: 1589 EIFGILYPK 1597
++ +L+ +
Sbjct: 2563 DLLRVLFQR 2571
>gi|297738288|emb|CBI27489.3| unnamed protein product [Vitis vinifera]
Length = 2562
Score = 990 bits (2559), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/878 (56%), Positives = 621/878 (70%), Gaps = 58/878 (6%)
Query: 11 MEGKGCSSSSKKAVGFAGHTV---FSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFV 67
ME +G S+ K+A+ + FSWSLEDI + +++QVE+IPE+F + YFGS++
Sbjct: 1 MEKEG--SNKKRAIAKDSRLIELLFSWSLEDISNNDLYRNQVERIPETFGTAGHYFGSYI 58
Query: 68 FPLLEETRMQLRSGLEAMRRAPYAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYK 127
FPLLEE R ++ S +E + AP+A+V +F+E KPYG+ Y ++VD WRN S+ G+EPYK
Sbjct: 59 FPLLEEIRAEMCSSMEDIHSAPFAEVTSFDESKPYGSLLYDVKVDNWRNRFSDHGREPYK 118
Query: 128 TLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRY-KVKARNNMQVH 186
TLPGDIL+L D KPE VSDL+RVGRTWTF SVT +PDDE+E+ + Y KVK +V
Sbjct: 119 TLPGDILILTDAKPETVSDLQRVGRTWTFASVTRIPDDENEDNSSSTYFKVKISKEYEVD 178
Query: 187 DKTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWD 246
D+ ++S F I+L NI+ NKRIWN+LHM GN +I++VL +DS+V E C C V G +
Sbjct: 179 DEKQRSMFVIFLINIVTNKRIWNALHMSGNISIISEVLSSDSLVKENCCQCPVWSDGVYA 238
Query: 247 EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK 306
E F S SS LNESQ A++ CLR++ C H+ VELIWGPPGTGKTKTVS+LL LLR
Sbjct: 239 ENFPMSSSSNLNESQTKAVVTCLRKIQCNHKPSVELIWGPPGTGKTKTVSVLLFKLLRTN 298
Query: 307 CRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFE 366
RTLAC PTNVA+TE+ASRVLKL KES++ N+ C LGDIL+FGNKDRLKV
Sbjct: 299 IRTLACAPTNVAVTEVASRVLKLTKESFE-----NSLFCSLGDILIFGNKDRLKVGADIV 353
Query: 367 EIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEK 426
E+YL+YR+ +L ECF PL+GWR+CF+SMID LEDCVS YHI++E
Sbjct: 354 EVYLDYRVDRLIECFGPLTGWRYCFNSMIDFLEDCVSHYHIFLEN--------------- 398
Query: 427 ECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKS 486
E RKE S +RFK LR C+ IFCTHL K +I E +FQ MV L
Sbjct: 399 ELRKEKSCSN----------EDRFKATAGPLRRCVQIFCTHLSKDFILEQNFQNMVDLIR 448
Query: 487 LLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWN 546
LLDSF + + + L L+ R ECLSVL+ L
Sbjct: 449 LLDSFEKAVQDSSPSFSDSSNL---------------------LYMSRGECLSVLKILRG 487
Query: 547 SLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESE 606
SL++L+LP ++ ++++FCFK ASL F TASSSYKLHS +KPL+ LVIDEAAQLKE E
Sbjct: 488 SLNKLSLPSGMNEGLIKEFCFKMASLIFCTASSSYKLHSANMKPLDLLVIDEAAQLKECE 547
Query: 607 STIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRM 666
STIPLQL GI HA+LIGDECQLPAMV SK+S EAGFGRSLFERL+SL H KHLLN+QYRM
Sbjct: 548 STIPLQLPGIRHAILIGDECQLPAMVSSKVSKEAGFGRSLFERLSSLGHFKHLLNVQYRM 607
Query: 667 HPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRE-DFIYHSCR 725
HPSIS FPN +FY NQILD NVKSKSY K YL+G FG+YSFIN+ G E D + S +
Sbjct: 608 HPSISFFPNSKFYFNQILDAPNVKSKSYTKHYLSGPMFGSYSFINVRGKEEHDDVGKSRK 667
Query: 726 NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVK 785
N++EV+ VIKI++ LYK W GS QK+SIGV+SPY AQVVAI+ K+G +YE F+VKVK
Sbjct: 668 NMIEVAIVIKIVRNLYKEWSGSNQKLSIGVISPYAAQVVAIQDKLGQKYEKLGNFSVKVK 727
Query: 786 SIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSES 845
++DGFQGGEEDIIII TVR NTGGSIGF+S PQR NVALTRAR+CLWILG+ERTL +SES
Sbjct: 728 TVDGFQGGEEDIIIICTVRSNTGGSIGFLSNPQRTNVALTRARYCLWILGNERTLANSES 787
Query: 846 IWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEI 883
IW LV DAK R+CFFNADE++++A A LEV E ++
Sbjct: 788 IWEDLVLDAKKRKCFFNADEDKDIANAILEVKTEFDQL 825
Score = 528 bits (1360), Expect = e-146, Method: Compositional matrix adjust.
Identities = 305/728 (41%), Positives = 435/728 (59%), Gaps = 89/728 (12%)
Query: 877 SKELVEIGAESLTSTSQGG---KKEEFEFEFVKAFRSINLIHKVLNSLGRFDELLMLENG 933
SKE+ +I E L S + K EFVKAF S+ L +L DELL LE
Sbjct: 1696 SKEIGKIEQEFLESCAHHYHELKDNRKMMEFVKAFHSMESKRNFLTTLDCLDELLRLEEE 1755
Query: 934 SGNFMEAANMAVLEGDIFLATDLLQKAWNFREASKLVLNFVFSNSLWSPGSRGWPLKQFT 993
GNFMEAAN+A L G+I L ++L KA N+R+AS L L +VF+NSLW+ GSRGWPLKQF
Sbjct: 1756 LGNFMEAANIAKLSGEILLEAEMLGKAGNYRDASTLFLCYVFANSLWASGSRGWPLKQFV 1815
Query: 994 QKEELLQKAKSLAKNDSNQFYEFVCAEANILSNDHSNLVMMNQQFIDSKRHQNIRGEILS 1053
+KEELL KA+ ++ +S QFYEFVC E +ILSN+ ++L MNQ S+RH+++RGEILS
Sbjct: 1816 KKEELLTKARLFSERESKQFYEFVCMEVSILSNEQTSLFEMNQCLSTSQRHKSVRGEILS 1875
Query: 1054 SRMILDFHLHSNASTYHWEDELVLNLTTYSDDRICKSQVSIETFVYFWNCWKDKIVKIFE 1113
+R I+D HL+SN + Y W DE V +L +S+ R+ ++ +S+ET +YFWN WK+ +V IFE
Sbjct: 1876 ARKIIDAHLNSNTTKYEWTDEWVSDLKQHSEVRLSQNCISVETLLYFWNVWKENVVNIFE 1935
Query: 1114 YLGCLRVQQDVDGYRSYEDFCLSYFSVWKHCSNLDTTYLLLKSDAYWVRELSNMYVQKRG 1173
LG QDV Y SY +FC +YF V K G
Sbjct: 1936 SLGLDETTQDVKNYSSYGEFCFNYFGVRKQT----------------------------G 1967
Query: 1174 QLVSIDLHQLVSAAQSYWSTELLSVGINVLDKLEALHEQSIKNSLSVLCQSKCLSYIYDV 1233
+LV +D Q SAA+SYWS+ELLSVG VL+ LE L+ S SLS+ CQSK L ++++V
Sbjct: 1968 KLVYVDADQFASAARSYWSSELLSVGTKVLENLEVLYNYSTWKSLSLFCQSKLLVHMFEV 2027
Query: 1234 AKFLLDSEFLYRHWDDVKTLQKFVELSTEDFFRCIFPLDWRESLSKDMISLRQTEVCRSI 1293
++FLL +FL ++ +TLQKF+++ST F IFPLDW++S +++M+SLR+TE+ R++
Sbjct: 2028 SEFLLKLKFLDLRYNAARTLQKFLDISTRQFCSKIFPLDWKKSSTENMVSLRETELSRNL 2087
Query: 1294 LEEIVSGYVTSKSKLSYGQIGRIAVMILGSGKLHNGLYRKVVERCVKDSPWQAFLKCLSQ 1353
LEE++S ++ KS+ +YGQIGR+A ILG GKL LY K+ E+ + PW+AF+K LS
Sbjct: 2088 LEEVISTSISIKSEFTYGQIGRVASWILGMGKLTTELYEKIAEKFAVNPPWKAFIKNLSG 2147
Query: 1354 KMESEYLQHPSESNNERELYVIQKLHGALLDTYGANWRKEYDYMSPAYFLYLLERLLILI 1413
+ S + P +S
Sbjct: 2148 NIGSGF---PQDS----------------------------------------------- 2157
Query: 1414 SCFQGYIFTTKSSFVDWRIYQEPHTNPTASFVTDVWQSFGDVLDSIFFIVQHFLYNEKEM 1473
GY FTTKSS+++W I+QE ++ P V + FG LD + +I Q LY ++
Sbjct: 2158 ----GYCFTTKSSYIEWLIFQEWNSFPNPGLVANPQFPFGATLDYVAYIAQDLLYKKQVT 2213
Query: 1474 IEWISKSHKNVNNYHSLVVLRLVVIICLLHLN--FGKFGSSLRDLLGRKYVSRLLPLEFC 1531
+EWI KS+ N N Y+ L+VLRLV+IICLL +N K+ L LL R ++ LLP +FC
Sbjct: 2214 VEWIRKSNINFNEYYPLLVLRLVIIICLLCVNAKHEKYVEMLFGLLRRGDITSLLPRDFC 2273
Query: 1532 DAL--RKIENHNCLNVHEISQAFKKIGNPLVIASLGKNCSQFLCPDAIFVNMKVMKSTDE 1589
D L R+ N ++V+ +++A +K+ NPLVI L +N S+ CPDAIF++M V + ++
Sbjct: 2274 DVLWRRRKRNQFDISVNVLAEALRKVDNPLVIVKLQRNSSEVSCPDAIFIDMTVNQCRED 2333
Query: 1590 IFGILYPK 1597
+ +L+ +
Sbjct: 2334 LLRVLFQR 2341
>gi|359473527|ref|XP_002263192.2| PREDICTED: uncharacterized protein LOC100243095 [Vitis vinifera]
Length = 2788
Score = 983 bits (2542), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/870 (56%), Positives = 629/870 (72%), Gaps = 21/870 (2%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
+FSWSLEDI+++ +K QVE+IPESF +V YFGS+++PLLE+ R ++ S +E + RAP+
Sbjct: 18 LFSWSLEDIYNEDLYKTQVEEIPESFGTVDHYFGSYIYPLLEDIRAEMCSSMEDIHRAPF 77
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRV 150
A+VI+F E K Y + VD WRN S+ KEPYKT+PGDIL+LA+ KPE VSDL+RV
Sbjct: 78 AEVISFVESKSDRPLFYDVMVDRWRNRFSDRDKEPYKTMPGDILILAEAKPETVSDLQRV 137
Query: 151 GRTWTFVSVTTVPDDEDEN-------KKENRYKVKARNNMQVHDKTKKSFFFIYLTNILP 203
GRTWTF VT +P++EDE+ ++VK N +V D + S F ++L N +
Sbjct: 138 GRTWTFALVTKIPEEEDEDEDEDEDDSTSTYFEVKISKNHEVDDAKQSSMFVVFLINTIA 197
Query: 204 NKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVG 263
N+RIWN+LH+ GN +I++VL +DS+V E C V G + +KF S SS LNESQ
Sbjct: 198 NRRIWNALHLFGNMCIISRVLSSDSLVKENYYQCPVWIDGGYAKKFALSLSSNLNESQNQ 257
Query: 264 AMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELA 323
A+LACLR++ H+ VELIWGPPGTGKTKTV +LL TLLR+ RTLAC PTN+AITE+
Sbjct: 258 AVLACLRKIQYNHKPSVELIWGPPGTGKTKTVGVLLYTLLRMNIRTLACAPTNIAITEVV 317
Query: 324 SRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFAP 383
SRVLKL +E ++ D +N+ C LGDILLFGNK RLK + E+YL+YR+ +L EC P
Sbjct: 318 SRVLKLREEPFENDLGANSMFCSLGDILLFGNKSRLKAHSDIVEVYLDYRVDRLFECLGP 377
Query: 384 LSGWRHCFSSMIDLLEDCVSQYHIYVEKLKERE-DCNVNQSEEKE--------CRKETEG 434
++GWRH F+SMID LEDCVS Y I++E +E C+ KE E E
Sbjct: 378 VTGWRHRFNSMIDFLEDCVSHYRIFLENESRKEKSCSNKGGSTKEEVFMKNELSSNECES 437
Query: 435 SKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNL 494
+K F+++ R+RF+ LR C+ IFCTHLPKS+I + +FQ MV L LLDSF +L
Sbjct: 438 TKKVDISFIEFARDRFRATAGPLRRCVRIFCTHLPKSFILKQNFQNMVYLIQLLDSFESL 497
Query: 495 LFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLP 554
L +D+VV +ELE+LFSH E + ++ LL +H R ECLSVL+ L +SL+ELNLP
Sbjct: 498 LSKDDVVPEELERLFSHQ--EAVRDSYSDSSDLLYVH--RGECLSVLKTLRSSLNELNLP 553
Query: 555 CTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLA 614
+K +++ FCFK ASL F TASSSY+L+ V +KPL+ LVIDEAAQLKE ES IPLQL
Sbjct: 554 SAMNKGLIKQFCFKMASLIFCTASSSYQLYRVNMKPLDLLVIDEAAQLKECESVIPLQLP 613
Query: 615 GINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFP 674
I HA+LIGDECQLPAMV SK+S EAGFGRSLFERL+SL H KHLLN+QYRMHPSIS FP
Sbjct: 614 DIRHAILIGDECQLPAMVSSKVSKEAGFGRSLFERLSSLGHFKHLLNVQYRMHPSISFFP 673
Query: 675 NLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRE-DFIYHSCRNIVEVSAV 733
N +FY NQILD NVKSKSY K YL+G FG+YSFIN+ G E D + S +N++EV+ V
Sbjct: 674 NSKFYFNQILDAPNVKSKSYTKHYLSGPMFGSYSFINVRGKEEHDDVGKSRKNMIEVAIV 733
Query: 734 IKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGG 793
IKI+ LYK W GS QK+SIGV+SPY AQVVA++ +G +YEN D F VKVK++DGFQ G
Sbjct: 734 IKIVGNLYKEWSGSNQKLSIGVISPYAAQVVAVQDNLGEKYENLDNFAVKVKTVDGFQAG 793
Query: 794 EEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCD 853
EEDIII+STVR N+ GSIGF+S PQR NVALTRARHCLWILG+ERTL SES+W LVCD
Sbjct: 794 EEDIIIMSTVRANSHGSIGFLSNPQRTNVALTRARHCLWILGNERTLAKSESVWEDLVCD 853
Query: 854 AKARQCFFNADEERNLAKARLEVSKELVEI 883
AK R+ FFNADE++++AKA LE+ E ++
Sbjct: 854 AKRRKRFFNADEDKDMAKAILEIKTEFDQL 883
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 323/702 (46%), Positives = 472/702 (67%), Gaps = 9/702 (1%)
Query: 903 EFVKAFRSINLIHKVLNSLGRFDELLMLENGSGNFMEAANMAVLEGDIFLATDLLQKAWN 962
EFVKAF S+ K L +L DELL LE GNF+EAAN+A L G+I L ++L KA N
Sbjct: 1866 EFVKAFHSMESKCKFLTTLDCLDELLRLEEELGNFLEAANIAKLSGEILLEAEMLGKAGN 1925
Query: 963 FREASKLVLNFVFSNSLWSPGSRGWPLKQFTQKEELLQKAKSLAKNDSNQFYEFVCAEAN 1022
+R+AS L L +V SNSLW+ GSRGWPLKQF +KEELL KA+ A+ +S FY+FVC EA+
Sbjct: 1926 YRDASILFLCYVLSNSLWASGSRGWPLKQFVKKEELLTKARLFAERESKYFYDFVCMEAS 1985
Query: 1023 ILSNDHSNLVMMNQQFIDSKRHQNIRGEILSSRMILDFHLHSNASTYHWEDELVLNLTTY 1082
ILS++ ++L MNQ S RH+++RGEILS+R I+D HL+SNA+ + W DE V +L +
Sbjct: 1986 ILSDEQTSLFEMNQCLSTSLRHKSVRGEILSARKIIDAHLNSNATKFEWTDEWVYDLKQH 2045
Query: 1083 SDDRICKSQVSIETFVYFWNCWKDKIVKIFEYLGCLRVQQDVDGYRSYEDFCLSYFSVWK 1142
S+ R+ ++ +S+ET +Y WN WK+ IV + E+LG L QDV Y SY +FCL+Y V K
Sbjct: 2046 SEVRLSQNCISVETLLYSWNVWKENIVNVLEFLG-LDETQDVKDYASYGEFCLNYLGVRK 2104
Query: 1143 HCSNLDTTYLLLKSDAYWVRELSNMYVQKRGQLVSIDLHQLVSAAQSYWSTELLSVGINV 1202
NL+ Y LL DA WVRE+ + ++++ G+LV +D HQ SAAQSYWS+EL S+G V
Sbjct: 2105 QSKNLNVIYALLNPDADWVREVDDRFIRRTGRLVYVDGHQFASAAQSYWSSELFSIGTKV 2164
Query: 1203 LDKLEALHEQSIKNSLSVLCQSKCLSYIYDVAKFLLDSEFLYRHWDDVKTLQKFVELSTE 1262
L+ L+ L+ S SLS+ CQSK L ++++VAKFLL +FL R +TLQKF+ + TE
Sbjct: 2165 LENLKVLYNHSTGKSLSLFCQSKSLIHMFEVAKFLLKLKFLDRRCHAARTLQKFLNILTE 2224
Query: 1263 DFFRCIFPLDWRESLSKDMISLRQTEVCRSILEEIVSGYVTSKSKLSYGQIGRIAVMILG 1322
F +FPLDW++S +++M+SLR+TE+ R + ++ +S ++ K++L++GQIGR+A ILG
Sbjct: 2225 QFCSKVFPLDWKKSSTENMVSLRETELSRILFKKAISTSISMKNELTHGQIGRVASWILG 2284
Query: 1323 SGKLHNGLYRKVVERCVKDSPWQAFLKCLSQKMESEYLQHPSE-SNNERELYVIQKLHGA 1381
+GK LY K+ ER + PW+AF+ LS S + Q +++ + ++ +L A
Sbjct: 2285 TGKQTTELYEKIAERFAVNPPWKAFINNLSGNKGSGFPQGSVPIHESQKHVSLVSRLDEA 2344
Query: 1382 LLDTYGANWRKEYDYMSPAYFLYLLERLLILISCFQGYIFTTKSSFVDWRIYQEPHTNPT 1441
L DTY ANWR+ DY+SP YFLYL++RLLIL++ Q Y FTTKSS+++W I+QE +++P
Sbjct: 2345 LRDTYNANWRQS-DYISPGYFLYLVDRLLILVTSSQEYCFTTKSSYIEWLIFQEWNSSPN 2403
Query: 1442 ASFVTDVWQSFGDVLDSIFFIVQHFLYNEKEMIEWISKSHKNVNNYHSLVVLRLVVIICL 1501
FV + FG+ LD + I Q LYN+ + +EWI KS+ N+ Y+ L++LRLV+IICL
Sbjct: 2404 PGFVANQPFPFGETLDYVARITQELLYNKHDTVEWIRKSNINLEEYYPLLLLRLVIIICL 2463
Query: 1502 LHLNF----GKFGSSLRDLLGRKYVSRLLPLEFCDALRKIENHN--CLNVHEISQAFKKI 1555
L +N GK+ L LL ++ LP +FCD LR+ N +++ ++AF+K+
Sbjct: 2464 LCVNVSVDDGKYVGILFHLLEMSDITSQLPQDFCDVLRRRRKRNQFSIDISVFAKAFRKV 2523
Query: 1556 GNPLVIASLGKNCSQFLCPDAIFVNMKVMKSTDEIFGILYPK 1597
+PLVI L ++ S+ CPDAIF++M V +S ++ +L+ +
Sbjct: 2524 DDPLVIVKLQRDSSEVSCPDAIFIDMTVNQSRQDLLHVLFQR 2565
>gi|255555527|ref|XP_002518800.1| conserved hypothetical protein [Ricinus communis]
gi|223542181|gb|EEF43725.1| conserved hypothetical protein [Ricinus communis]
Length = 2820
Score = 981 bits (2535), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/946 (54%), Positives = 665/946 (70%), Gaps = 34/946 (3%)
Query: 10 MMEGKGCSSSSKKAVGFAG--HTVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFV 67
MMEG C S + +G TVFSWSLEDI +++ F +VEKIP++F+SV++Y GS+V
Sbjct: 1 MMEGD-CPSGKTAILTDSGFISTVFSWSLEDIINENLF--EVEKIPQTFESVQRYLGSYV 57
Query: 68 FPLLEETRMQLRSGLEAMRRAPYAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYK 127
PLLEETR QL S +E + RAP+A+ +AF + KP+G Y ++VD W+N S+S KEPYK
Sbjct: 58 LPLLEETRAQLHSSIETISRAPFAEAVAFSKDKPHGELLYNVKVDQWKNRSSDSQKEPYK 117
Query: 128 TLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKE------NRYKVKARN 181
TLPGDILVLAD KPE VSDL+R+GRTWTF VT + +D + + E +K++A
Sbjct: 118 TLPGDILVLADAKPETVSDLQRIGRTWTFALVTNISEDNIQGENEYTATTSTNFKIQASK 177
Query: 182 NMQVHDKTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSVV--------DER 233
++V D KS F I+L N+ N+RIWN+LHM GN +I +VL VV +R
Sbjct: 178 QVEVSDGMDKSLFVIFLINVTTNRRIWNALHMYGNLNIIKEVLSAHPVVWDLNIIFVVDR 237
Query: 234 CELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTK 293
L + D F +LN SQ A+LACL ++ C H+S VELIWGPPGTGKTK
Sbjct: 238 LLLIQLHPSKLLDVYF------SLNVSQTEALLACLHKMQCNHKSSVELIWGPPGTGKTK 291
Query: 294 TVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLF 353
TVSMLL LLR+KCRTL C PTNVAI E+A+RVLKLV ES + S ++ I +G+ILLF
Sbjct: 292 TVSMLLSLLLRMKCRTLTCAPTNVAIKEVATRVLKLVTESQRTGSGADALIYSVGNILLF 351
Query: 354 GNKDRLKVNPGFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEK-- 411
GN +RLK++ EEIYL+YR++KL ECFAPL+GW HC +S ID EDC+SQY I++E
Sbjct: 352 GNSERLKLDSAIEEIYLDYRVEKLIECFAPLTGWCHCLTSTIDFFEDCISQYFIFLENEM 411
Query: 412 LKEREDCNVNQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKS 471
+KE+E+ + ++++EKE R S K FL++ RERF + L+ C C H+P+S
Sbjct: 412 IKEKENNHESKNKEKEFRNVANVSNQGNKSFLEFARERFLSTALPLKRCALSLCIHIPES 471
Query: 472 YISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSH-SVDEGISWAFVRKRYLLQL 530
YI +++ +V+L LL +FG LLF+D+V+S++L++LFS + E S F LL L
Sbjct: 472 YILKHNVDNIVSLVGLLGTFGTLLFRDDVISEDLQELFSRPDLVEDSSQGFAE--VLLLL 529
Query: 531 HQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKP 590
+R ECL +L+ + NSL +L+LP SK + FCF+ ASL F TASSSYKLHS+EI+P
Sbjct: 530 CLKRDECLLLLKTVCNSLRKLDLPSAMSKGSIVKFCFRTASLIFCTASSSYKLHSLEIEP 589
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
L+ LVIDEAAQLKE ES IPLQ+AGI HA+LIGDECQLPAMVES +S EAGFGRSLFERL
Sbjct: 590 LDLLVIDEAAQLKECESAIPLQIAGIRHAILIGDECQLPAMVESVVSGEAGFGRSLFERL 649
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFI 710
++L HSKHLL++QYRMHP IS FPN +FY NQILD +NVK K YEK L G FG YSFI
Sbjct: 650 STLGHSKHLLDMQYRMHPFISRFPNSRFYFNQILDASNVKCKVYEKHPLPGPMFGPYSFI 709
Query: 711 NIIGGRE--DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
N+ GRE D I HS +N+VEV+ V+KI+++L+KAW GS + ++IGV+SPY AQV AIR
Sbjct: 710 NVFDGREEMDNIGHSWKNMVEVAIVLKIVRRLHKAWNGSNKNLTIGVISPYAAQVNAIRD 769
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
K+ +YE+ GF+VKV+S+DGFQGGEEDIII+STVR N+GG++GF+S PQR+NVALTRAR
Sbjct: 770 KLNKKYEDIYGFSVKVRSVDGFQGGEEDIIILSTVRANSGGAVGFLSNPQRINVALTRAR 829
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAESL 888
HCLWILG+ERTLI+S+SIW LV DAK RQCFFN DE++ LAK LEV KE ++ + L
Sbjct: 830 HCLWILGNERTLINSDSIWKELVFDAKQRQCFFNVDEDKELAKTILEVKKEFDQLN-DLL 888
Query: 889 TSTSQGGKKEEFEFEFVKAFR-SINLIHKVLNSLGRFDELLMLENG 933
T S K ++ F + FR S + V + LL L +G
Sbjct: 889 TGDSAFFKSARWKVLFSENFRKSFGKLSSVRKKTSALNLLLKLSSG 934
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/824 (46%), Positives = 532/824 (64%), Gaps = 35/824 (4%)
Query: 904 FVKAFRSINLIHKVLNSLGRFDELLMLENGSGNFMEAANMAVLEGDIFLATDLLQKAWNF 963
+V+AF SI+ + L L DELL E SGNF+EAAN+A +GDI L DLL KA F
Sbjct: 1901 YVRAFDSISSVRTFLKKLTCLDELLSFEEESGNFLEAANIAKQKGDILLEADLLGKAEQF 1960
Query: 964 REASKLVLNFVFSNSLWSPGSRGWPLKQFTQKEELLQKAKSLAKNDSNQFYEFVCAEANI 1023
++AS L+L + F++SLWS G++GWPLKQF +KE+LL KAKS AKN S QFYEF EA+I
Sbjct: 1961 KDASLLILWYAFASSLWSSGNKGWPLKQFAEKEKLLTKAKSFAKNVSIQFYEFTHVEADI 2020
Query: 1024 LSNDHSNLVMMNQQFIDSKRHQNIRGEILSSRMILDFHLHSNASTYHWEDELVLNLTTYS 1083
L ND ++L M+ Q S+ H++ RGEILS+R ILD HL+ N + Y WED+++++L +S
Sbjct: 2021 LLNDQTSLFMLKQHLDASQGHKSTRGEILSARKILDTHLNVNPAKYGWEDDMIIDLVRFS 2080
Query: 1084 DDRICKSQVSIETFVYFWNCWKDKIVKIFEYLGCLRVQQDVDGYRSYEDFCLSYFSVWKH 1143
+ +I +QVS ET VYFWN WKD +V IF+YL L ++DV+ RSYE+FCL+Y V +
Sbjct: 2081 EGKISGNQVSSETLVYFWNFWKDNVVNIFKYLESLE-KRDVNECRSYEEFCLNYLGVRRQ 2139
Query: 1144 CSNLDTTYLLLKSDAYWVRELSNMYVQKRGQLVSIDLHQLVSAAQSYWSTELLSVGINVL 1203
+NLD YLLL +AYWV+EL N +++ G+ +S+D++Q +SAAQSYW +ELLSVG++VL
Sbjct: 2140 FNNLDAVYLLLVPNAYWVKELDNRFMKSNGKFLSLDVNQFISAAQSYWCSELLSVGMDVL 2199
Query: 1204 DKLEALHEQSIKNSLSVLCQSKCLSYIYDVAKFLLDSEFLYRHWDDVKTLQKFVELSTED 1263
KL+AL+ SIKN LS+ CQS+ L +IY VAKFLL S+FL R D K L +FV LSTE
Sbjct: 2200 VKLKALYNLSIKNYLSLFCQSRLLIHIYAVAKFLLGSKFLDRRHHDKKALLEFVWLSTEH 2259
Query: 1264 FFRCIFPLDWRESLSKDMISLRQTEVCRSILEEIVSGYVTSKSKLSYGQIGRIAVMILGS 1323
F CI+PL WRESL ++MISLR+TE R++++E S V+ S LSYGQ+GRI+ ILGS
Sbjct: 2260 LFGCIYPLHWRESLKENMISLRRTEFFRNLIKENTSETVSFASMLSYGQLGRISNAILGS 2319
Query: 1324 GKLHNGLYRKVVERCVKDSPWQAFLKCLSQKMESEYLQHPSESNNERELYVIQKLHGALL 1383
GKL N LY+K+ + ++ W A + LS+ + E N EL + KLHGAL
Sbjct: 2320 GKLCNELYKKIADGVRWNTAWMALIVDLSRNKDINI-----EGAN--ELSLKWKLHGALE 2372
Query: 1384 DTYGANWRKEYDYMSPAYFLYLLERLLILISCFQGYIFTTKSSFVDWRIYQEPHTNPTAS 1443
D Y ANWRKE D++SP FLYL+ER L+L+S F+ TKS+F +W IY E + ++
Sbjct: 2373 DAYNANWRKENDFISPECFLYLVERQLMLLSYFRDDFLITKSAFTEWLIYLESDGSSNST 2432
Query: 1444 FVTDVWQSFGDVLDSIFFIVQHFLYNEKEMIEWISKSHKNVNNYHSLVVLRLVVIICLLH 1503
V QS +L + +V++FLYN K +EWI KS NV +Y++ VVLRLVVI C+L
Sbjct: 2433 LVEHSPQSVNSILQFLVDVVRYFLYNMKYTMEWIKKSRTNVKDYYAGVVLRLVVIACVLF 2492
Query: 1504 LNFGKFGSSLRDLLGRKYVSRLLPLEFCDAL------RKIENHNCLNVHEISQAFKKIGN 1557
LNFG L +LLGR Y++ LP E DAL RK N N ++V+ ++ AFKKIGN
Sbjct: 2493 LNFGLCRDLLFELLGRNYITNQLPKELFDALHRRWKQRKSLNVN-IDVNVLADAFKKIGN 2551
Query: 1558 PLVIASLGKNCSQFLCPDAIFVNMKVMKSTDEIFGILYPKM-EACQVQVG-TSKDVPSKR 1615
PLVI S GK+ S+FLCPDAIFV+M V +S +++ L+P + + Q G T D S
Sbjct: 2552 PLVIVSCGKS-SRFLCPDAIFVDM-VNQSKEDMLTALFPNINKTFQDHEGFTELDATSSF 2609
Query: 1616 PASLPEDTDAQNMNDNTLVMNLDQLCKVFEALKMVDNGNNGNYRR------SVKYQVGTS 1669
+ D Q QL ++FE L ++ N+ ++R +VK +V +
Sbjct: 2610 KGAESLDKYDQGKRSKLSEDGYGQLLEIFEFL---NSMNHEDFRNLVANDPTVKAKVEKT 2666
Query: 1670 KDVPSKRPASLPEDTDAQNKNDN---TMVMNLDQLCKALEALKM 1710
+ S A+L +D +N+N++ + LD+L + AL+M
Sbjct: 2667 IHLLS---AAL-DDNATENENESLNREAAIVLDELKQLYAALEM 2706
>gi|356510822|ref|XP_003524133.1| PREDICTED: uncharacterized protein LOC100802419 [Glycine max]
Length = 2812
Score = 927 bits (2397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/868 (54%), Positives = 616/868 (70%), Gaps = 24/868 (2%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
+FSWSLEDIF++ +KD+VE I F+SV+ YFGS+V+PLLEETR QL S +E + APY
Sbjct: 14 IFSWSLEDIFNEDLYKDKVEPIDLLFKSVRHYFGSYVYPLLEETRAQLCSSMEILSSAPY 73
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRV 150
A+VI+ EE G Y ++ D W+N S GKE YKTL GD+ +LADFKPE V DL+RV
Sbjct: 74 AEVISLEETYSNGKTLYNVKTDSWKNRFSGHGKELYKTLFGDLFILADFKPETVEDLQRV 133
Query: 151 GRTWTFVSVTTVPDDEDENKKEN---RYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRI 207
GRTWT V V ++E+EN + +KV A N+ V+++ +KS F ++LTNI+P++RI
Sbjct: 134 GRTWTLVLSAGVAEEENENDNTDIMSTFKVAASKNIDVNEEGQKSLFIVFLTNIIPDRRI 193
Query: 208 WNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLA 267
W++LHM GN +I ++L VV+E CE S+Q D++ SS LN SQ A+ A
Sbjct: 194 WSALHMPGNSMLIKKILCAGGVVEESCEYFSLQPDYVKDDRTYQRLSSELNGSQYEAIWA 253
Query: 268 CLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVL 327
CL + C H+S V+LIWGPPGTGKTKT+ LL LL++ RTL C PTNVA+ E+ASRVL
Sbjct: 254 CLSSIQCCHKSTVDLIWGPPGTGKTKTLGTLLYALLKMNHRTLVCAPTNVAVKEVASRVL 313
Query: 328 KLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFAPLSGW 387
+V+ES+ R+S + C LGD++LFGN +RLKV E+IYL+YR+K L CFAPL+GW
Sbjct: 314 SMVRESFDRNSEA--LFCALGDMVLFGNHERLKVGADIEDIYLDYRVKHLMMCFAPLTGW 371
Query: 388 RHCFSSMIDLLEDCVSQYHIYVEK--LKERE---DCNVNQSEEKECRKETEGSKGERKPF 442
R CFSSMIDLLE+CVS YHI++E K++E D N N++++ +E K K F
Sbjct: 372 RCCFSSMIDLLENCVSHYHIFIENELRKDQEQVSDNNFNKTKDNSTSHCSETEK-VHKTF 430
Query: 443 LKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVS 502
L++VRERF V LR+CI + CTH+ +SYI +++F+++V L + SF LLFQ N+VS
Sbjct: 431 LEFVRERFLSVAVQLRDCISVLCTHVARSYILDHNFEDLVCLIHKVSSFEALLFQSNIVS 490
Query: 503 KELEKLFS-----HSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTT 557
+ LEKLFS H+ E + V YLL ++ R++CLS LR L SLDEL+LP +
Sbjct: 491 EVLEKLFSPPEHLHNSCE----SSVGVEYLL--YKSRTDCLSSLRTLKGSLDELSLPNSM 544
Query: 558 SKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGIN 617
+K + +FC + +SL FSTASSS+KLHSV ++PL LVIDEAAQLKE ES IPL L +
Sbjct: 545 NKESIREFCLQTSSLIFSTASSSFKLHSVVMEPLKVLVIDEAAQLKECESIIPLLLPNVE 604
Query: 618 HAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQ 677
HAVL+GDECQLPAMV S +S + GFGRSLF RL+SL H H LNIQYRMHP+IS FPN
Sbjct: 605 HAVLVGDECQLPAMVASNVSHKVGFGRSLFARLSSLGHPNHFLNIQYRMHPAISSFPNSH 664
Query: 678 FYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDF--IYHSCRNIVEVSAVIK 735
FY NQILD NV K+Y KQYL G FG YSFIN++GG E+F S +N+VEV+ V+K
Sbjct: 665 FYFNQILDAPNVVRKNYRKQYLPGPMFGPYSFINVVGGIEEFDDAGRSRKNMVEVAIVMK 724
Query: 736 ILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEE 795
I++ +KAW SK+ +SIGVVSPY AQVVAI+ +G Y+ DGF VKVK+IDGFQGGE
Sbjct: 725 IIKNCFKAWCDSKENLSIGVVSPYAAQVVAIQDLLGQRYDTHDGFDVKVKTIDGFQGGER 784
Query: 796 DIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAK 855
DIII+STVR N S+ FIS QR NVALTRAR+CLW+LG+ERTL + E++W +LV DAK
Sbjct: 785 DIIILSTVRTNHSTSLQFISNHQRTNVALTRARYCLWVLGNERTLTNEENVWKSLVLDAK 844
Query: 856 ARQCFFNADEERNLAKARLEVSKELVEI 883
R+CFFNADE++ LAK+ + KEL ++
Sbjct: 845 KRRCFFNADEDKELAKSIWDTKKELDQL 872
Score = 494 bits (1273), Expect = e-136, Method: Compositional matrix adjust.
Identities = 300/729 (41%), Positives = 440/729 (60%), Gaps = 27/729 (3%)
Query: 903 EFVKAFRSINLIHKVLNSLGRFDELLMLENGSGNFMEAANMAVLEGDIFLATDLLQKAWN 962
+FVKAF S++L + L SL DELL+LE SGNFMEAAN+A + GD+ DLL KA
Sbjct: 1893 KFVKAFHSMDLKREFLRSLSLLDELLVLEEESGNFMEAANIAKMMGDVLHEVDLLGKASK 1952
Query: 963 FREASKLVLNFVFSNSLWSPGSRGWPLKQFTQKEELLQKAKSLAKNDSNQFYEFVCAEAN 1022
F EA +L+L +V NSLWS GS+GWP+K F QK ELL +A S AK + + FY EA
Sbjct: 1953 FMEACELMLLYVLGNSLWSAGSKGWPIKPFAQKVELLNRALSFAKEELSSFYVIASTEAE 2012
Query: 1023 ILSNDHSNLVMMNQQFIDSKRHQNIRGEILSSRMILDFHLHSNASTYHWEDELVLNLTTY 1082
ILSN+HSN + S+ + +IRGEI+ +LD H N+S + W D L L
Sbjct: 2013 ILSNEHSNTFEILNHLKSSRTYGSIRGEIICLWKLLDAHFQLNSSKFVWLDNL---LDDS 2069
Query: 1083 SDDRICKSQVSIETFVYFWNCWKDKIVKIFEYLGCLRVQQDVDGYRSYEDFCLSYFSVWK 1142
+ + ++Q S+E+ + W CWKD IV + E L L+ QD+ + SY F L+Y V K
Sbjct: 2070 VEGMLLENQFSVESLFHCWTCWKDNIVCVVESLPSLK-SQDIHHHSSYGKFALNYLGVRK 2128
Query: 1143 HCSNLDTTYLLLKSDAYWVRELSNMYVQKRGQLVSIDLHQLVSAAQSYWSTELLSVGINV 1202
SNL+ Y+LL +A WV +L + +++K G+LVS+D+ LVSAA+SYWS++L+SVG+ V
Sbjct: 2129 QTSNLNDIYILLIPEANWVMKLGDRFLKKNGRLVSVDVQDLVSAAESYWSSQLVSVGMKV 2188
Query: 1203 LDKLEALHEQSIKNSLSVLCQSKCLSYIYDVAKFLLDSEFLYRHWDDVKTLQKFVELSTE 1262
L L+AL++ S +LS CQ + L IYDV KFLL S+ + ++KTL+KF +
Sbjct: 2189 LHILDALYKFSASKALSEFCQFRSLFLIYDVFKFLLKSKCFNLNHGNLKTLEKFSRTPID 2248
Query: 1263 DFFRCIFPLDWRESLSKDMISLRQTEVCRSILEEIVSGYVTSKSKLSYGQIGRIAVMILG 1322
+ PLDW +SL KDM+ LR TE C+ ++++++ + K L+YGQIG + VMILG
Sbjct: 2249 RSLCYLVPLDWSKSLIKDMVYLRTTETCQDLVKDVIYENINRKDMLTYGQIGNVVVMILG 2308
Query: 1323 SGKLHNGLYRKVVERCVKDSPWQAFLKCLSQKMESEYLQHPSESNNERELYVIQKLHGAL 1382
+ L + L+ K++ R ++ WQ F++ L +L ++++ E ++ + AL
Sbjct: 2309 TANLKSELFVKILARFKENPLWQEFIQSL-------HLNSAQKNSHVDE--AVENFYKAL 2359
Query: 1383 LDTYGANWRKEYDYMSPAYFLYLLERLLILISC--FQGYIFTTKSSFVDWRIYQEPHTNP 1440
TY NW +E DY+SP+ F+YLL+RLL+L S ++G+IF TKSSFV+W I+Q+ ++ P
Sbjct: 2360 QYTYSVNWTREIDYISPSCFMYLLDRLLLLTSHGKWKGFIFATKSSFVEWLIHQDENSFP 2419
Query: 1441 TASFVTDVWQSFGDVLDSIFFIVQHFLYNEKEMIEWISKSHKNVNNYHSLVVLRLVVIIC 1500
S + DV + IF +++ L ++ I WI KS+ NV NY L +LRL+V +C
Sbjct: 2420 NLSVMADVQSGGEHIHRFIFSVLRELLNDQNGTISWIRKSNLNVKNYFPLFLLRLIVSLC 2479
Query: 1501 LLHLNFGKFGSSLRDLLGRKYVSRLLPLEFCDALRKIENHNCLNVHEISQAFKKIGNPLV 1560
LLHL+ GK+ L +LL + +V LPLEF + L+K NH L V ++AFK IGNPLV
Sbjct: 2480 LLHLSSGKYLELLHNLLKKNHVLSQLPLEFRNVLQKGRNHLVLKV--FAEAFKLIGNPLV 2537
Query: 1561 IASLGKNCSQFLCPDAIFVNMKVMKSTDEIFGILYPK---------MEACQVQVGTSKDV 1611
+A S+ LCPDA+FV++ + + I +L+P + TSK+
Sbjct: 2538 VARFHNTSSEILCPDAVFVDLTICQRK-FILEVLFPNRVDSVDEETAAVLEASDSTSKEF 2596
Query: 1612 PSKRPASLP 1620
S +S P
Sbjct: 2597 SSTNCSSFP 2605
>gi|297738290|emb|CBI27491.3| unnamed protein product [Vitis vinifera]
Length = 6100
Score = 887 bits (2292), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/854 (53%), Positives = 577/854 (67%), Gaps = 92/854 (10%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
+FSWSLEDI+++ +K QVE+IPESF +V YFGS+++PLLE+ R ++ S +E + RAP+
Sbjct: 3504 LFSWSLEDIYNEDLYKTQVEEIPESFGTVDHYFGSYIYPLLEDIRAEMCSSMEDIHRAPF 3563
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRV 150
A+VI+F E K Y + VD WRN S+ KEPYKT+PGDIL+LA+ KPE VSDL+RV
Sbjct: 3564 AEVISFVESKSDRPLFYDVMVDRWRNRFSDRDKEPYKTMPGDILILAEAKPETVSDLQRV 3623
Query: 151 GRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWNS 210
GRTWTF VK N +V D + S F ++L N + N+RIWN+
Sbjct: 3624 GRTWTFA------------------LVKISKNHEVDDAKQSSMFVVFLINTIANRRIWNA 3665
Query: 211 LHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLR 270
LH+ GN +I++VL +DS+ E C V G + +KF S SS LNESQ A+LACLR
Sbjct: 3666 LHLFGNMCIISRVLSSDSL--ENYYQCPVWIDGGYAKKFALSLSSNLNESQNQAVLACLR 3723
Query: 271 RLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLV 330
++ H+ VELIWGPPGTGKTKTV +LL TLLR+ RTLAC PTN+AITE+ SRVLKL
Sbjct: 3724 KIQYNHKPSVELIWGPPGTGKTKTVGVLLYTLLRMNIRTLACAPTNIAITEVVSRVLKLR 3783
Query: 331 KESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFAPLSGWRHC 390
+E ++ D +N+ C LGDILLFGNK RLK + E+YL+YR+ +L EC P++GWRH
Sbjct: 3784 EEPFENDLGANSMFCSLGDILLFGNKSRLKAHSDIVEVYLDYRVDRLFECLGPVTGWRHR 3843
Query: 391 FSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPFLKYVRERF 450
F+SMID LEDCVS Y I++E +E +++ F+++ R+RF
Sbjct: 3844 FNSMIDFLEDCVSHYRIFLENESRKEKMDIS--------------------FIEFARDRF 3883
Query: 451 KCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFS 510
+ LR C LLDSF + + +S
Sbjct: 3884 RATAGPLRRC--------------------------LLDSF-----------ETVRDSYS 3906
Query: 511 HSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRA 570
S D LL +H R ECLSVL+ L +SL+ELNLP +K +++ FCFK A
Sbjct: 3907 DSSD------------LLYVH--RGECLSVLKTLRSSLNELNLPSAMNKGLIKQFCFKMA 3952
Query: 571 SLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPA 630
SL F TASSSY+L+ V +KPL+ LVIDEAAQLKE ES IPLQL I HA+LIGDECQLPA
Sbjct: 3953 SLIFCTASSSYQLYRVNMKPLDLLVIDEAAQLKECESVIPLQLPDIRHAILIGDECQLPA 4012
Query: 631 MVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVK 690
MV SK+S EAGFGRSLFERL+SL H KHLLN+QYRMHPSIS FPN +FY NQILD NVK
Sbjct: 4013 MVSSKVSKEAGFGRSLFERLSSLGHFKHLLNVQYRMHPSISFFPNSKFYFNQILDAPNVK 4072
Query: 691 SKSYEKQYLTGTEFGTYSFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQ 749
SKSY K YL+G FG+YSFIN+ G E D + S +N++EV+ VIKI+ LYK W GS Q
Sbjct: 4073 SKSYTKHYLSGPMFGSYSFINVRGKEEHDDVGKSRKNMIEVAIVIKIVGNLYKEWSGSNQ 4132
Query: 750 KVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGG 809
K+SIGV+SPY AQVVA++ +G +YEN D F VKVK++DGFQ GEEDIII+STVR N+ G
Sbjct: 4133 KLSIGVISPYAAQVVAVQDNLGEKYENLDNFAVKVKTVDGFQAGEEDIIIMSTVRANSHG 4192
Query: 810 SIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNL 869
SIGF+S PQR NVALTRARHCLWILG+ERTL SES+W LVCDAK R+ FFNADE++++
Sbjct: 4193 SIGFLSNPQRTNVALTRARHCLWILGNERTLAKSESVWEDLVCDAKRRKRFFNADEDKDM 4252
Query: 870 AKARLEVSKELVEI 883
AKA LE+ E ++
Sbjct: 4253 AKAILEIKTEFDQL 4266
Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/881 (47%), Positives = 534/881 (60%), Gaps = 121/881 (13%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
+FSWSLEDI ++ +K QVEKIP +FQS + YF SFV+PLLEETR QL GLE + RAP+
Sbjct: 1371 LFSWSLEDIQNEDLYKTQVEKIPGTFQSAEHYFASFVYPLLEETRAQLSLGLELISRAPF 1430
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRV 150
A+VI ++++P Y + VDYWRN + +PY+T+PGD+++ AD K E SD++ +
Sbjct: 1431 AEVICIDKVEPDEELLYNVRVDYWRNRSAGRCLDPYRTVPGDLVIFADAKLETFSDIQCL 1490
Query: 151 GR-TWTFVSVTTVPDDEDENKKENR-YKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIW 208
GR TW F VT V ++E E+ +KV+ D K F +L NI +RIW
Sbjct: 1491 GRKTWAFALVTEVRENEIEDDGTTVCFKVRVSKERTEGDGKNKWTFMYFLINITTGERIW 1550
Query: 209 NSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLAC 268
N+LHM GN +I QVL TDS V E CELC +G E FG SS LN+SQ+ A+LA
Sbjct: 1551 NALHMSGNLNIIKQVLFTDSTVKESCELCPESSRGVRTETFGTILSSKLNKSQMAAVLAS 1610
Query: 269 LRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLK 328
LR++ C H+S VELI GPPGTGKT+T+S LL LL RTL C PT VA+ E+ASRV+K
Sbjct: 1611 LRKIHCNHKSSVELICGPPGTGKTRTISALLCALLGTNIRTLTCAPTAVAVKEVASRVMK 1670
Query: 329 LVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFAPLSGWR 388
+KE L +CF PL+GWR
Sbjct: 1671 HLKE--------------------------------------------LAKCFEPLNGWR 1686
Query: 389 HCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPFLKYVRE 448
H F+SMI LE E
Sbjct: 1687 HSFNSMIVFLEG-----------------------------------------------E 1699
Query: 449 RFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKL 508
+FK + LR + TH+PKS+I E++FQ M++L L SF +LL QDN+VS+ELE L
Sbjct: 1700 QFKSTSLHLREVVITLSTHIPKSFIMEHNFQAMLSLLGFLRSFESLLHQDNMVSEELENL 1759
Query: 509 FSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFK 568
F+ + S V L + RSECL +L+NL NSLDEL P SK +L DFCF+
Sbjct: 1760 FAGKKNVKHSSKSVADSSTLM--EIRSECLHILKNLRNSLDELQFPKNNSKDLLIDFCFQ 1817
Query: 569 RASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 628
AS FSTAS S+KLH V++KPLN LVIDEAAQL+E ESTIPLQL GI A+LIGD+ QL
Sbjct: 1818 TASSIFSTASDSHKLHLVDMKPLNILVIDEAAQLRECESTIPLQLPGIKLAILIGDKFQL 1877
Query: 629 PAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
P+ V S I D AGFGRSL+ERL+SL+H+KH LN+QYRMHPSISLFP FY NQILD N
Sbjct: 1878 PSRVTSNICDRAGFGRSLYERLSSLDHAKHFLNLQYRMHPSISLFPCSNFYANQILDAPN 1937
Query: 689 VKSKSYEKQYLTGTEFGTYSFINIIGGRE--DFIYHSCRNIVEVSAVIKILQKLYKA--W 744
VK K+YEK+YL F Y FINI GRE D + HS +N+VEV+ ++KI+Q LY+
Sbjct: 1938 VKHKAYEKKYLPDPVFRPYLFINISCGREEVDEVGHSVKNMVEVAVLMKIVQNLYQESLA 1997
Query: 745 VGSKQK----------------------VSIGVVSPYTAQVVAIRKKIGFEYENKDGFTV 782
+ SK++ + IGV+S YTAQV+ I+++ +YEN D F+V
Sbjct: 1998 ISSKRQLCFFLFVSIPLLALEIQSERTLLRIGVLSSYTAQVLEIQERFRQKYENNDRFSV 2057
Query: 783 KVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLIS 842
KV++IDGFQGGEEDII+ISTVR N GS+G ++ + NVALTRARH LWILGSERTL+
Sbjct: 2058 KVQTIDGFQGGEEDIILISTVRANNFGSVGVMADVKITNVALTRARHGLWILGSERTLVM 2117
Query: 843 SESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEI 883
SE++W +V DAK R C NADE+ +LA +V EL E+
Sbjct: 2118 SETVWKDIVHDAKDRHCLLNADEDCDLANTIFKVKTELDEL 2158
Score = 537 bits (1384), Expect = e-149, Method: Compositional matrix adjust.
Identities = 327/791 (41%), Positives = 475/791 (60%), Gaps = 39/791 (4%)
Query: 903 EFVKAFRSINLIHKVLNSLGRFDELLMLENGSGNFMEAANMAVLEGDIFLATDLLQKAWN 962
++V+AF S I L L DELL++E NF+EAAN+A GDI L ++L +A
Sbjct: 2694 KYVRAFHSFESIRTFLRDLCCLDELLLIEKEKENFVEAANIAKCIGDISLEVEMLVEAGC 2753
Query: 963 FREASKLVLNFVFSNSLWSPGSRGWPLKQFTQKEELLQKAKSLAKNDSNQFYEFVCAEAN 1022
++SK +L +V NSLW PGS GWPLKQF +K+EL+ KAK A+ S QFY F+C E +
Sbjct: 2754 LEDSSKAILQYVLVNSLWQPGSEGWPLKQFIRKKELVNKAKVNAERVSKQFYGFICTEVD 2813
Query: 1023 ILSNDHSNLVMMNQQFIDSKRHQNIRGEILSSRMILDFHLH-SNASTYHWEDELVLNLTT 1081
ILS++ S L +N+ F S+ + ++RGEILS+R I+D HLH + + +L LTT
Sbjct: 2814 ILSHEQSTLFELNEYFRSSQNNGSVRGEILSARKIIDAHLHLISILEDRGKSDLYTYLTT 2873
Query: 1082 YSDDRICKSQVSIETFVYFW---NCWKDKIVKIFEYLGCLRVQQDVDGYRSYEDFCLSYF 1138
+S++RI +Q SIET V+FW N WKD+IV I EYLG + Y Y++FCL+Y
Sbjct: 2874 HSEERISSNQFSIETLVHFWKFWNFWKDEIVNILEYLGGA-----IKKYVDYKEFCLNYL 2928
Query: 1139 SVWKHCSNLDTTYLLLKSDAYWVRELSNMYVQKRGQLVSIDLHQLVSAAQSYWSTELLSV 1198
V K + YL+L +A WVR+ + ++ + G+LV ID Q VSAA+SYW ELLSV
Sbjct: 2929 GVLKQPNKRTPLYLVLYPEADWVRKTDDRFLHRNGKLVFIDASQFVSAARSYWCAELLSV 2988
Query: 1199 GINVLDKLEALHEQSIKNSLSVLCQSKCLSYIYDVAKFLLDSEFLYRHWDDVKTLQKFVE 1258
GI +L+ LE L++ +NS V CQS L YI+DV FL+ + L+ +TLQ F+E
Sbjct: 2989 GIKILEILENLYQFCTRNSFPVFCQSIPLIYIFDVTNFLMKTGSLHCWHPHAETLQMFLE 3048
Query: 1259 LSTEDFFRCIFPLDWRESLSKDMISLRQTEVCRSILEEIVSGYVTSKSKLSYGQIGRIAV 1318
S+E FF I+PLDWR+S ++DM+SLR+ ++ ++L E+ ++ K L+YGQIGR +
Sbjct: 3049 KSSERFFGYIYPLDWRKSSTEDMVSLRENKLAGNLLREVFLKNISLKGNLTYGQIGRAVM 3108
Query: 1319 MILGSGKLHNGLYRKVVERCVKDSPWQAFLKCLSQKMESEYLQHPSESNNERELYVIQKL 1378
++LGS KL + + E KDSPW+ F+K L SE L S + E EL +I KL
Sbjct: 3109 IMLGSSKLTD----EFAESFNKDSPWKDFIKRLCVTKRSE-LSSKSSAAAEEELSLILKL 3163
Query: 1379 HGALLDTYGANWRKEYDYMSPAYFLYLLERLLILISCFQGYIFTTKSSFVDWRIYQEPHT 1438
AL DTY ANWRK D++SP FLYL+E LL L+S QGY+FTTK+ V+W I+Q+ +T
Sbjct: 3164 REALEDTYNANWRKGMDFVSPVCFLYLVEHLLFLVSYCQGYVFTTKALVVEWLIFQQWNT 3223
Query: 1439 NPTASFVTDVWQS-----FGDVLDSIFFIVQHFLYNEKEMIEWISKSHKNVNNYHSLVVL 1493
P+AS +TDV S GD + IV L +E+ +EW+ KS+ ++ +Y ++VL
Sbjct: 3224 TPSASSLTDVGASEKTEILGDTYSFMVSIVHELLCDEEGTVEWLEKSNTDLKDY-PVLVL 3282
Query: 1494 RLVVIICLLHLNFGKFGSSLRDLLGRKYVSRLLPLEFCDALRKIENHNCLNVHEISQAFK 1553
RLVVI+CL+ +N GK L DLLGR + LP +F DA + + + V +++A K
Sbjct: 3283 RLVVIMCLICVNSGKHFDLLFDLLGRNCIISHLPKQFYDAFLGRQKRSFVEV--LAEALK 3340
Query: 1554 KIGNPLVIASLGKNCSQFLCPDAIFVNMKVMKSTDEIFGILYPKMEACQVQ-------VG 1606
+I + LVI S G N F PDAI ++ V ++ + I +L+PK + + Q G
Sbjct: 3341 QIESVLVIVSWGNNHFHF-SPDAILLDDVVNQNKEGILRVLFPKNVSSRGQQSLVYSDCG 3399
Query: 1607 TSKDVPSKRPASLPEDTDAQN-MNDNTLVMNLDQLCKVFEALKMVDNG--------NNGN 1657
+ + S ++ ++ A+N N L N ++ C++F ALK ++N N N
Sbjct: 3400 KASEPDSSNSSTADQNMKARNEAEGNDLQENYERFCEIFNALKPLENAKDAGMEKCNLNN 3459
Query: 1658 YRRSVKYQVGT 1668
R VKYQ+ +
Sbjct: 3460 PRLQVKYQMAS 3470
Score = 457 bits (1177), Expect = e-125, Method: Compositional matrix adjust.
Identities = 280/701 (39%), Positives = 410/701 (58%), Gaps = 101/701 (14%)
Query: 903 EFVKAFRSINLIHKVLNSLGRFDELLMLENGSGNFMEAANMAVLEGDIFLATDLLQKAWN 962
EFVKAF S+ K L +L DELL LE GNF+EAAN+A L G+I L ++L KA N
Sbjct: 5272 EFVKAFHSMESKCKFLTTLDCLDELLRLEEELGNFLEAANIAKLSGEILLEAEMLGKAGN 5331
Query: 963 FREASKLVLNFVFSNSLWSPGSRGWPLKQFTQKEELLQKAKSLAKNDSNQFYEFVCAEAN 1022
+R+AS L L +V SNSLW+ GSRGWPLKQF +KEELL KA+ A+ +S FY+FVC EA+
Sbjct: 5332 YRDASILFLCYVLSNSLWASGSRGWPLKQFVKKEELLTKARLFAERESKYFYDFVCMEAS 5391
Query: 1023 ILSNDHSNLVMMNQQFIDSKRHQNIRGEILSSRMILDFHLHSNASTYHWEDELVLNLTTY 1082
ILS++ ++L MNQ S RH+++RGEILS+R I+D HL+SNA+ + W DE V +L +
Sbjct: 5392 ILSDEQTSLFEMNQCLSTSLRHKSVRGEILSARKIIDAHLNSNATKFEWTDEWVYDLKQH 5451
Query: 1083 SDDRICKSQVSIETFVYFWNCWKDKIVKIFEYLGCLRVQQDVDGYRSYEDFCLSYFSVWK 1142
S+ R+ ++ +S+ET +Y WN WK+ IV + E+LG L QDV Y SY +FCL+Y V K
Sbjct: 5452 SEVRLSQNCISVETLLYSWNVWKENIVNVLEFLG-LDETQDVKDYASYGEFCLNYLGVRK 5510
Query: 1143 HCSNLDTTYLLLKSDAYWVRELSNMYVQKRGQLVSIDLHQLVSAAQSYWSTELLSVGINV 1202
NL+ SYWS+EL S+G V
Sbjct: 5511 QSKNLN----------------------------------------SYWSSELFSIGTKV 5530
Query: 1203 LDKLEALHEQSIKNSLSVLCQSKCLSYIYDVAKFLLDSEFLYRHWDDVKTLQKFVELSTE 1262
L+ L+ L+ S SLS+ CQSK L ++++VAKFLL +FL R +TLQKF+ + TE
Sbjct: 5531 LENLKVLYNHSTGKSLSLFCQSKSLIHMFEVAKFLLKLKFLDRRCHAARTLQKFLNILTE 5590
Query: 1263 DFFRCIFPLDWRESLSKDMISLRQTEVCRSILEEIVSGYVTSKSKLSYGQIGRIAVMILG 1322
F +FPLDW++S +++M+SLR+TE+ R + ++ +S ++ K++L++GQIGR+A ILG
Sbjct: 5591 QFCSKVFPLDWKKSSTENMVSLRETELSRILFKKAISTSISMKNELTHGQIGRVASWILG 5650
Query: 1323 SGKLHNGLYRKVVERCVKDSPWQAFLKCLSQKMESEYLQHPSESNNERELYVIQKLHGAL 1382
+GK LY K+ ER + PW+AF+ LS S + Q
Sbjct: 5651 TGKQTTELYEKIAERFAVNPPWKAFINNLSGNKGSGFPQ--------------------- 5689
Query: 1383 LDTYGANWRKEYDYMSPAYFLYLLERLLILISCFQGYIFTTKSSFVDWRIYQEPHTNPTA 1442
G+ + CF TTKSS+++W I+QE +++P
Sbjct: 5690 ----GSEY------------------------CF-----TTKSSYIEWLIFQEWNSSPNP 5716
Query: 1443 SFVTDVWQSFGDVLDSIFFIVQHFLYNEKEMIEWISKSHKNVNNYHSLVVLRLVVIICLL 1502
FV + FG+ LD + I Q LYN+ + +EWI KS+ N+ Y+ L++LRLV+IICLL
Sbjct: 5717 GFVANQPFPFGETLDYVARITQELLYNKHDTVEWIRKSNINLEEYYPLLLLRLVIIICLL 5776
Query: 1503 HLNF----GKFGSSLRDLLGRKYVSRLLPLEFCDALRKIENHN--CLNVHEISQAFKKIG 1556
+N GK+ L LL ++ LP +FCD LR+ N +++ ++AF+K+
Sbjct: 5777 CVNVSVDDGKYVGILFHLLEMSDITSQLPQDFCDVLRRRRKRNQFSIDISVFAKAFRKVD 5836
Query: 1557 NPLVIASLGKNCSQFLCPDAIFVNMKVMKSTDEIFGILYPK 1597
+PLVI L ++ S+ CPDAIF++M V +S ++ +L+ +
Sbjct: 5837 DPLVIVKLQRDSSEVSCPDAIFIDMTVNQSRQDLLHVLFQR 5877
Score = 258 bits (660), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/221 (58%), Positives = 165/221 (74%), Gaps = 3/221 (1%)
Query: 666 MHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRE--DFIYHS 723
MHPSISLFP FY NQILD NVK K+YEK+YL F Y FINI GRE D + HS
Sbjct: 1 MHPSISLFPCSNFYANQILDAPNVKHKAYEKKYLPDPVFRLYLFINISCGREEVDEVGHS 60
Query: 724 CRNIVEVSAVIKILQKLYKAW-VGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTV 782
+N+VEV+ ++KI+Q LY+AW G K+++ IGV+SPYTAQV+ I++++ +YEN D F+V
Sbjct: 61 VKNMVEVAVLMKIVQNLYQAWRSGIKEELRIGVLSPYTAQVLEIQERLKQKYENNDMFSV 120
Query: 783 KVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLIS 842
KV++IDGFQGGEEDII+ISTVR N GS+G ++ + NVALTRARHCLWILGSERTL+
Sbjct: 121 KVQTIDGFQGGEEDIILISTVRANNFGSVGVMADVKITNVALTRARHCLWILGSERTLVM 180
Query: 843 SESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEI 883
SE++W +V DAK R C NADE+ +LA +V EL E+
Sbjct: 181 SETVWKDIVHDAKDRHCLLNADEDCDLANTMFKVKAELHEL 221
Score = 198 bits (504), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/263 (44%), Positives = 163/263 (61%), Gaps = 9/263 (3%)
Query: 903 EFVKAFRSINLIHKVLNSLGRFDELLMLENGSGNFMEAANMAVLEGDIFLATDLLQKAWN 962
++V+AF S I L L DELL++E NF+EAAN+A GDI L ++L +A
Sbjct: 1097 KYVRAFHSFESIRTFLRDLCCLDELLLIEKEKENFVEAANIAKCIGDISLEVEMLVEAGC 1156
Query: 963 FREASKLVLNFVFSNSLWSPGSRGWPLKQFTQKEELLQKAKSLAKNDSNQFYEFVCAEAN 1022
++SK +L +V NSLW PGS GWPLKQF +K+EL+ KAK A+ S QFY F+C E +
Sbjct: 1157 LEDSSKAILQYVLVNSLWQPGSEGWPLKQFIRKKELVNKAKVNAERVSKQFYGFICTEVD 1216
Query: 1023 ILSNDHSNLVMMNQQFIDSKRHQNIRGEILSSRMILDFHLH-SNASTYHWEDELVLNLTT 1081
ILS++ S L +N+ F S+ + ++RGEILS+R I+D HLH + + +L LTT
Sbjct: 1217 ILSHEQSTLFELNEYFRSSQNNGSVRGEILSARKIIDAHLHLISILEDRGKSDLYTYLTT 1276
Query: 1082 YSDDRICKSQVSIETFVY---FWNCWKDKIVKIFEYLGCLRVQQDVDGYRSYEDFCLSYF 1138
+S++RI +Q SIET V+ FWN WKD+IV I EYLG + Y Y++FCL+Y
Sbjct: 1277 HSEERISSNQFSIETLVHFWKFWNFWKDEIVNILEYLGGA-----IKKYVDYKEFCLNYL 1331
Query: 1139 SVWKHCSNLDTTYLLLKSDAYWV 1161
V K + YL+L +A W+
Sbjct: 1332 GVLKQPNKRTPLYLVLYPEADWM 1354
>gi|449445385|ref|XP_004140453.1| PREDICTED: uncharacterized protein LOC101214394 [Cucumis sativus]
Length = 2763
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/861 (51%), Positives = 588/861 (68%), Gaps = 25/861 (2%)
Query: 25 GFAGHTVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEA 84
G H +FSW+LEDI F++D+V+ IPESF+SV QY GS++FPLLEETR +L SGL+A
Sbjct: 19 GLIDH-LFSWTLEDILYDDFYRDKVQNIPESFKSVHQYLGSYLFPLLEETRAELSSGLKA 77
Query: 85 MRRAPYAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKV 144
+ +AP+A++++ EE K G +++D W+NT +NSGKEPY+TLPGDI ++ D KPE
Sbjct: 78 IHKAPFARMVSIEEPKSSGKLLLNVKLDVWKNTANNSGKEPYRTLPGDIFLILDDKPETD 137
Query: 145 SDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPN 204
+L+ RTW F SV + D K+ N+ +K FF ++L N+ N
Sbjct: 138 MNLQCSTRTWAFASVNKITD----TGCSTNLKLNVSKNISGEHGMQKEFFIVFLMNVTTN 193
Query: 205 KRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGA 264
RIWNSLH + K++ VL S+ DE C CS+ EK S SS LN+SQ A
Sbjct: 194 LRIWNSLHFSEDVKIVKHVLSKSSMGDEICSKCSLYNNVICAEKLRTSLSSVLNDSQKAA 253
Query: 265 MLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELAS 324
+L C+ + C H+ VELIWGPPGTGKTKT+S LL +L +K R LAC PTNVAITELAS
Sbjct: 254 VLCCVCKALCEHKPSVELIWGPPGTGKTKTISFLLWAILEMKQRVLACAPTNVAITELAS 313
Query: 325 RVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFAPL 384
RV+KL++ES SR +C LGD+LLFGNKDRLKV EEIY +YR+ +L ECF
Sbjct: 314 RVVKLLRES----SREGGVLCSLGDVLLFGNKDRLKVGSELEEIYSDYRVDRLLECFGQ- 368
Query: 385 SGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPFLK 444
SGW+ +S+I+LLE S+YH+++E NVN S K+T + FL+
Sbjct: 369 SGWKSHITSLINLLESTNSEYHMFLES-------NVNMSRRD---KKTGDNAVAATSFLR 418
Query: 445 YVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKE 504
++RE+F V+LR C+ TH+PK +I E++FQ +V L +L+DSFG LL Q+N+ S +
Sbjct: 419 FIREKFNTTAVALRGCLQTLITHIPKHFILEHNFQNIVILLNLVDSFGMLLSQENITSTQ 478
Query: 505 LEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLED 564
+E LFS S+D + F R++CLS+LR L SLD+L LP T +K +++
Sbjct: 479 MEVLFS-SLD--VFMEFPNSSVEATFLHLRNQCLSILRFLQASLDQLQLPTTANKKSVKE 535
Query: 565 FCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGD 624
FCF+RASL TASSS++L+ +++ P+ LVIDEAAQLKE ES +PLQL GI HA+LIGD
Sbjct: 536 FCFQRASLILCTASSSFQLNFMKMDPVKLLVIDEAAQLKECESMVPLQLPGIKHAILIGD 595
Query: 625 ECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQIL 684
ECQLPA+V S++ D AG+GRSLFERL+ L HSKHLLN QYRMHPSIS FPN +FY NQI
Sbjct: 596 ECQLPAIVSSQVCDAAGYGRSLFERLSLLGHSKHLLNTQYRMHPSISYFPNSKFYSNQIT 655
Query: 685 DGANVKSKSYEKQYLTGTEFGTYSFINIIGGRE--DFIYHSCRNIVEVSAVIKILQKLYK 742
D V + Y+K+Y+ FG Y+FIN+ G+E D S +N +EV+ VIKI++KLYK
Sbjct: 656 DAPLVMDEVYKKRYIPSPMFGPYTFINVSVGKEEGDDDGRSKKNALEVAVVIKIIEKLYK 715
Query: 743 AWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIIST 802
AW K ++SIGV+S Y AQV AI+ ++G +YE +DGFTVKVKS+DGFQGGEED+II+ST
Sbjct: 716 AWRSVKTRLSIGVISFYAAQVTAIQGRLGQKYEKRDGFTVKVKSVDGFQGGEEDVIILST 775
Query: 803 VRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFN 862
VR N IGFIS QR+NVALTRARHCLWI+G TL +S S W A+V DAK RQC+FN
Sbjct: 776 VRSNRRKKIGFISNSQRINVALTRARHCLWIVGDATTLGNSNSEWEAVVSDAKDRQCYFN 835
Query: 863 ADEERNLAKARLEVSKELVEI 883
A+E+++LA A +EV K L+E+
Sbjct: 836 AEEDKDLADAIIEVKKVLLEL 856
Score = 276 bits (705), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 157/344 (45%), Positives = 210/344 (61%), Gaps = 3/344 (0%)
Query: 902 FEFVKAFRSINLIHKVLNSLGRFDELLMLENGSGNFMEAANMAVLEGDIFLATDLLQKAW 961
+FV+ F S++ L S F+ELL LE + N EA +AV +G++ L DLL+K
Sbjct: 2216 LKFVRDFHSMDSKRSFLKSFNYFNELLSLEMEAQNVSEALAIAVSQGNLLLEVDLLEKTG 2275
Query: 962 NFREASKLVLNFVFSNSLWSPGSRGWPLKQFTQKEELLQKAKSLAKNDSNQFYEFVCAEA 1021
N+++AS L++N++ SNSLWS GS+GWPLK+F K++LLQK S+AK+DS FYE + E
Sbjct: 2276 NYKDASLLLMNYIHSNSLWSSGSKGWPLKEFKHKQKLLQKMISIAKHDSESFYEMISVEV 2335
Query: 1022 NILSNDHSNLVMMNQQFIDSKRHQNIRGEILSSRMILDFHLHSNASTYHWEDELVLNLTT 1081
NILS S L M Q S+ +N RG ILS+ ILD HL N S Y WED + L
Sbjct: 2336 NILSCKVSGLDEMEQSLTASEGSKNFRGIILSTWKILDAHLKLNVSNYMWEDVIESELER 2395
Query: 1082 YSDDRICKSQVSIETFVYFWNCWKDKIVKIFEYLGCLRVQQDVDGY-RSYEDFCLSYFSV 1140
+S D I K+QVS +T VYFWN WKD + + YL + + DVD Y S +DFCLS+F V
Sbjct: 2396 HSKDTISKNQVSFQTLVYFWNLWKDSLFGVLNYLCSIDI-DDVDDYCESQQDFCLSHFGV 2454
Query: 1141 WKHCSNLDTTYLLLKSDAYWVRELSNMYVQKRGQLVSIDLHQLVSAAQSYWSTELLSVGI 1200
+ +N Y LL A WVRE+ N + G LVSI Q SA YWS+E+LSVG+
Sbjct: 2455 RRQYNNKKAHYFLLNPGADWVREVVNGSLHNNGGLVSIAACQFTSAGWRYWSSEVLSVGM 2514
Query: 1201 NVLDKLEALHEQS-IKNSLSVLCQSKCLSYIYDVAKFLLDSEFL 1243
VL+KL+AL S +S+S +CQS +V FL +S+FL
Sbjct: 2515 KVLEKLKALFSFSGTASSVSEMCQSMIAINFCEVENFLKNSQFL 2558
Score = 252 bits (644), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 210/341 (61%), Gaps = 7/341 (2%)
Query: 903 EFVKAFRSINLIHKVLNSLGRFDELLMLENGSGNFMEAANMAVLEGDIFLATDLLQKAWN 962
+FVK+F S+ L +LG +++L+LE + E+ +M + +G I + L+KA N
Sbjct: 1818 KFVKSFYSMVDKCSFLRTLGLSEKILLLEE---DVEESIDMMMKKGGILFEINCLEKAGN 1874
Query: 963 FREASKLVLNFVFSNSLWSPGSRGWPLKQFTQKEELLQKAKSLAKNDSNQFYEFVCAEAN 1022
FR+AS L+L V +SLW +GWPLK F +KE+LL +AK LA +S+ FY++V AEAN
Sbjct: 1875 FRDASSLILQHVLFSSLWGCAKKGWPLKLFKRKEKLLIRAKILAMKESDSFYDYVVAEAN 1934
Query: 1023 ILSNDHSNLVMMNQQFIDSKRHQNIRGEILSSRMILDFHLHSNASTYHWEDELVLNLTTY 1082
ILSN L M Q + S RH N+RGEILS+ ILD HL S+A Y WE ++V NL +
Sbjct: 1935 ILSNQTMKLFEMEQSWSSSHRHGNLRGEILSAWRILDAHLSSSAPKYIWEIKIVTNLREH 1994
Query: 1083 SDDRICKSQVSIETFVYFWNCWKDKIVKIFEYLGCLRVQQDVDGYRSYEDFCLSYFSVWK 1142
++ I +QVS++T VYFWN WK+ ++ I EYL Q + D Y SYE FCL Y V K
Sbjct: 1995 VEETISLNQVSVQTLVYFWNFWKENVMSILEYLQLPGSQINGD-YASYEQFCLDYLGVRK 2053
Query: 1143 HCSNLDTTYLLLKSDAYWVRELSNMYVQKRGQLVSIDLHQLVSAAQSYWSTELLSVGINV 1202
++ Y L+ +A W +S + V+I+ + V+AAQSYW +EL SVG+ V
Sbjct: 2054 QLIYGNSIYHLVNPEAEWAATVS---CEGNENFVTINSREFVTAAQSYWFSELSSVGLKV 2110
Query: 1203 LDKLEALHEQSIKNSLSVLCQSKCLSYIYDVAKFLLDSEFL 1243
L KL+ LH S++NSLS Q+ +++ +AKFL + +++
Sbjct: 2111 LSKLKDLHMLSVRNSLSFYFQAFTAVHMFQMAKFLTEDDYI 2151
Score = 97.1 bits (240), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 74/105 (70%)
Query: 902 FEFVKAFRSINLIHKVLNSLGRFDELLMLENGSGNFMEAANMAVLEGDIFLATDLLQKAW 961
++VKAF S++ L SL FDELL LE SGNF EAA +A L+GD+ L DLL+K+
Sbjct: 2621 LKYVKAFHSMDSKRVFLKSLACFDELLSLEEISGNFTEAALIARLKGDLLLEVDLLEKSG 2680
Query: 962 NFREASKLVLNFVFSNSLWSPGSRGWPLKQFTQKEELLQKAKSLA 1006
EA +L+L +V ++SLW S+GWPLKQF QKEELL KAKS+A
Sbjct: 2681 QLEEAVELILFYVLASSLWKTQSKGWPLKQFKQKEELLSKAKSIA 2725
>gi|359473529|ref|XP_003631316.1| PREDICTED: uncharacterized protein LOC100855072 [Vitis vinifera]
Length = 883
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/858 (52%), Positives = 587/858 (68%), Gaps = 19/858 (2%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
+FSWSLEDI ++ +K QVEKIP +FQS + YF SFV+PLLEETR QL GLE + RAP+
Sbjct: 18 LFSWSLEDIQNEDLYKTQVEKIPGTFQSAEHYFASFVYPLLEETRAQLSLGLELISRAPF 77
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRV 150
A+VI ++++P Y + VDYWRN + +PY+T+PGD+++ AD K E SD++ +
Sbjct: 78 AEVICIDKVEPDEELLYNVRVDYWRNRSAGRCLDPYRTVPGDLVIFADAKLETFSDIQCL 137
Query: 151 GR-TWTFVSVTTVPDDEDENKKENR-YKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIW 208
GR TW F VT V ++E E+ +KV+ D K F +L NI +RIW
Sbjct: 138 GRKTWAFALVTEVRENEIEDDGTTVCFKVRVSKERTEGDGKNKWTFMYFLINITTGERIW 197
Query: 209 NSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLAC 268
N+LHM GN +I QVL TDS V E CELC +G E FG SS LN+SQ+ A+LA
Sbjct: 198 NALHMSGNLNIIKQVLFTDSTVKESCELCPESSRGVRTETFGTILSSKLNKSQMAAVLAS 257
Query: 269 LRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLK 328
LR++ C H+S VELI GPPGTGKT+T+S LL LL RTL C PT VA+ E+ASRV+K
Sbjct: 258 LRKIHCNHKSSVELICGPPGTGKTRTISALLCALLGTNIRTLTCAPTAVAVKEVASRVMK 317
Query: 329 LVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFAPLSGWR 388
+KES++ D + + IC LGD+L FG+ D V +EIYL++R+++L +CF PL+GWR
Sbjct: 318 HLKESFETDPQKDASICSLGDLLFFGDYDSTAVGSEMKEIYLDHRVERLAKCFEPLNGWR 377
Query: 389 HCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPFLKYVRE 448
H F+SMI LE VS+ + ++L + E+ +++ GSKG+RK +L+ RE
Sbjct: 378 HSFNSMIVFLEGGVSEDRVSEDELSKMEEGSID------------GSKGKRKTYLQLARE 425
Query: 449 RFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKL 508
+FK + LR + TH+PKS+I E++FQ M++L L SF +LL QDN+VS+ELE L
Sbjct: 426 QFKSTSLHLREVVITLSTHIPKSFIMEHNFQAMLSLLGFLRSFESLLHQDNMVSEELENL 485
Query: 509 FSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFK 568
F+ + S V L + RSECL +L+NL NSLDEL P SK +L DFCF+
Sbjct: 486 FAGKKNVKHSSKSVADSSTLM--EIRSECLHILKNLRNSLDELQFPKNNSKDLLIDFCFQ 543
Query: 569 RASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 628
AS FSTAS S+KLH V++KPLN LVIDEAAQL+E ESTIPLQL GI A+LIGD+ QL
Sbjct: 544 TASSIFSTASDSHKLHLVDMKPLNILVIDEAAQLRECESTIPLQLPGIKLAILIGDKFQL 603
Query: 629 PAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
P+ V S I D AGFGRSL+ERL+SL+H+KH LN+QYRMHPSISLFP FY NQILD N
Sbjct: 604 PSRVTSNICDRAGFGRSLYERLSSLDHAKHFLNLQYRMHPSISLFPCSNFYANQILDAPN 663
Query: 689 VKSKSYEKQYLTGTEFGTYSFINIIGGRE--DFIYHSCRNIVEVSAVIKILQKLYKAW-V 745
VK K+YEK+YL F Y FINI GRE D + HS +N+VEV+ ++KI+Q LY+ W
Sbjct: 664 VKHKAYEKKYLPDPVFRPYLFINISCGREEVDEVGHSVKNMVEVAVLMKIVQNLYQDWRS 723
Query: 746 GSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC 805
G K+++ IGV+S YTAQV+ I+++ +YEN D F+VKV++IDGFQGGEEDII+ISTVR
Sbjct: 724 GIKEELRIGVLSSYTAQVLEIQERFRQKYENNDRFSVKVQTIDGFQGGEEDIILISTVRA 783
Query: 806 NTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADE 865
N GS+G ++ + NVALTRARH LWILGSERTL+ SE++W +V DAK R C NADE
Sbjct: 784 NNFGSVGVMADVKITNVALTRARHGLWILGSERTLVMSETVWKDIVHDAKDRHCLLNADE 843
Query: 866 ERNLAKARLEVSKELVEI 883
+ +LA +V EL E+
Sbjct: 844 DCDLANTIFKVKTELDEL 861
>gi|356577345|ref|XP_003556787.1| PREDICTED: uncharacterized protein LOC100781902 [Glycine max]
Length = 1636
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/876 (48%), Positives = 589/876 (67%), Gaps = 38/876 (4%)
Query: 11 MEGKGCSSSSKKAVGFAGHT--VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVF 68
MEG+ +S KKA G +FSWS+EDI ++ +K++V+KI SFQS+ Y S+ +
Sbjct: 1 MEGE-TTSKKKKANDDHGFIDLIFSWSIEDILNEDMYKNKVQKIDLSFQSIDHYVQSYAY 59
Query: 69 PLLEETRMQLRSGLEAMRRAPYAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKT 128
PLLEETR QL S +E + +APY +VI +E KP Y +++D W+N S+ G EPY+T
Sbjct: 60 PLLEETRAQLCSSMEIIHQAPYTEVIGIKEAKPLQNKLYNLKIDGWKNRFSHHGGEPYRT 119
Query: 129 LPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDK 188
LPGD+L+LAD+KPE V DL+R+ R W F S +DE ++ KVKA ++ + ++
Sbjct: 120 LPGDVLILADYKPEAVRDLQRIRRLWCFASTVWTTEDEGDS---TSLKVKASKDIDLEER 176
Query: 189 TKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEK 248
K+ F I+LTN+ PN+RIW +LHM GN K++ Q+L + V+E C CS D+
Sbjct: 177 RNKTLFLIFLTNVNPNRRIWGALHMPGNLKLLRQILCSRDDVEECCG-CSYPSDALRDDC 235
Query: 249 FGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCR 308
S LNESQ A+ ACL L+C H S V+LIWGPPGTGKT+T+ LL LL++K R
Sbjct: 236 TYQMLLSELNESQNKAISACLSGLNCNHNSAVKLIWGPPGTGKTRTLGTLLYALLKMKYR 295
Query: 309 TLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEI 368
L C PTNVAI E+ASRV+ ++KE++ ++S C +G++LLFG +RLK+ E++
Sbjct: 296 VLVCAPTNVAIKEVASRVVDIMKEAHSKES--GDLFCSMGEVLLFGYNERLKIGEDVEDV 353
Query: 369 YLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKEC 428
YL++R+++L ECF+P +G+ SMI LE CVS YHIYVE +K
Sbjct: 354 YLDHRVQQLTECFSPYNGFSSSLKSMIGFLEYCVSDYHIYVENMKR-------------- 399
Query: 429 RKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLL 488
EGS K FL ++RE F + L+ I I CTH+ S++ ++++Q ++ L L
Sbjct: 400 ----EGSMA--KSFLVFLREGFHSIALPLKAFISILCTHVAMSHLLKHNYQNLLCLNEAL 453
Query: 489 DSFGNLLFQDNVVSKELEKLFSHS----VDEGISWAFVRKRYLLQLHQRRSECLSVLRNL 544
+SF +LL ++ + S+ LEKLFS+ + ISW+F Y QL+++R+ CL+ L +
Sbjct: 454 ESFQDLLLKNTLFSERLEKLFSYKKLPVAYQTISWSFDGDAY--QLYEKRTACLNALLAV 511
Query: 545 WNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKE 604
+SL + L + + + E FCF+ +SL FSTAS S+KLHS+ +KPLN LVIDEAA LK+
Sbjct: 512 EHSLQDFMLKKSNNSEIRE-FCFQTSSLIFSTASGSHKLHSLTMKPLNILVIDEAAMLKD 570
Query: 605 SESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQY 664
ES IPL L GI+HA+L GDECQL +MV S +S+EAGFGRSLF+RL+SL K+LLN+Q+
Sbjct: 571 CESIIPLLLPGISHALLFGDECQLSSMVRSNVSNEAGFGRSLFQRLSSLGFPKYLLNMQH 630
Query: 665 RMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDF--IYH 722
RMHP IS FPN FY N+I D +NV+ Y KQYL G FG YSFIN+ G+E F
Sbjct: 631 RMHPQISSFPNSYFYFNKIQDASNVERIDYVKQYLPGPMFGPYSFINVFEGKEQFDDAGR 690
Query: 723 SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTV 782
S +N+ EV+ V+ IL+ L+KAW+ SK K+SIG+VSPY QVVAI++K+G YE+ DGF V
Sbjct: 691 SYKNMAEVAVVMTILKNLFKAWLNSKHKLSIGIVSPYVGQVVAIQEKLGQIYESHDGFNV 750
Query: 783 KVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLIS 842
VKSIDGFQGGE+D+II+STVR N S+ FIS PQR NVALTRARHCLWILG+ER L S
Sbjct: 751 DVKSIDGFQGGEKDVIILSTVRTNNRTSLEFISSPQRTNVALTRARHCLWILGNERALAS 810
Query: 843 SESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
+E++W A+V DAK R+CFF+AD+++ L KA L+ K
Sbjct: 811 NENVWKAIVLDAKNRKCFFDADQDKELGKAILDAKK 846
>gi|147865014|emb|CAN78970.1| hypothetical protein VITISV_037587 [Vitis vinifera]
Length = 2676
Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/719 (57%), Positives = 517/719 (71%), Gaps = 18/719 (2%)
Query: 175 YKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSVVDERC 234
++VK N +V D + S F ++L N + N+RIWN LH+ GN +I++VL +DS+V E
Sbjct: 176 FEVKISKNYEVDDAKQSSMFVVFLINTITNRRIWNVLHLFGNMCIISRVLSSDSLVKENY 235
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
C V G + +KF S SS LNESQ A+LACLR++ H+ VELIWGPPGTGKTKT
Sbjct: 236 YQCPVWSDGGYAKKFALSLSSNLNESQNQAVLACLRKIQYNHKPSVELIWGPPGTGKTKT 295
Query: 295 VSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFG 354
VS+LL LLR+ RTLAC PTN+AITE+ SRVLKL +ES++ D +N+ C LGDILLFG
Sbjct: 296 VSVLLYALLRMNIRTLACAPTNIAITEVVSRVLKLREESFENDLGANSMFCSLGDILLFG 355
Query: 355 NKDRLKVNPGFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKE 414
NK RLK + E+YL+YR+ +L EC P++GWRH F+SMID LEDCVS Y I++E
Sbjct: 356 NKSRLKAHSDIVEVYLDYRVDRLFECLGPVTGWRHRFNSMIDFLEDCVSHYRIFLENESR 415
Query: 415 RE-DCNVNQSEEKEC--------RKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFC 465
+E C+ KE E E +K F+++ R+RF+ LR C+ IFC
Sbjct: 416 KEKSCSNKSGSTKEAVFMKNELSSNECESTKKVDISFIEFARDRFRATAGPLRRCVRIFC 475
Query: 466 THLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKR 525
THLPKS+I + +FQ MV L LLDSF +LL +DBVV +ELE+LFSH E + ++
Sbjct: 476 THLPKSFILKQNFQNMVYLIQLLDSFESLLSKDBVVPEELERLFSHQ--EAVRDSYSDSS 533
Query: 526 YLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHS 585
LL +H R ECLSVL+ L +SL+ELNLP +K +++ FCFK ASL F TASSSY+L+
Sbjct: 534 DLLYVH--RGECLSVLKTLRSSLNELNLPSXMNKGLIKQFCFKMASLIFCTASSSYQLYR 591
Query: 586 VEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRS 645
V +KPL+ LVIDEAAQLKE ES IPLQL I HA+LIGDECQLPAMV S EAGFGRS
Sbjct: 592 VNMKPLDLLVIDEAAQLKECESVIPLQLPDIRHAILIGDECQLPAMV----SKEAGFGRS 647
Query: 646 LFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFG 705
LFERL+SL H KHLLN+QYRMHPSIS FPN +FY NQILD NVKSKSY K YL+G FG
Sbjct: 648 LFERLSSLGHFKHLLNVQYRMHPSISFFPNSKFYFNQILDAPNVKSKSYTKHYLSGPMFG 707
Query: 706 TYSFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVV 764
+YSFIN+ G E D + S +N++EV+ VIKI+ LYK W GS QK+SIGVVSPY AQVV
Sbjct: 708 SYSFINVRGKEEHDDVGKSRKNMIEVAIVIKIVGNLYKEWSGSNQKLSIGVVSPYAAQVV 767
Query: 765 AIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
A++ +G +YEN D F VKVK++DGFQ GEEDIII STVR N+ GSIGF+S PQR NVAL
Sbjct: 768 AVQDNLGEKYENLDNFAVKVKTVDGFQAGEEDIIIXSTVRANSHGSIGFLSNPQRTNVAL 827
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEI 883
TRARHCLWILG+ERTL SES W LVCDAK R+ FFNADE++++AKA LE+ E ++
Sbjct: 828 TRARHCLWILGNERTLAKSESXWEDLVCDAKXRKRFFNADEDKDMAKAILEIKXEFDQL 886
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 256/702 (36%), Positives = 396/702 (56%), Gaps = 82/702 (11%)
Query: 903 EFVKAFRSINLIHKVLNSLGRFDELLMLENGSGNFMEAANMAVLEGDIFLATDLLQKAWN 962
EFVKAF S+ K L +L DELL LE GNF+EAAN+A L G+I L ++L KA N
Sbjct: 1827 EFVKAFHSMESKCKFLTTLDCLDELLRLEEELGNFLEAANIAKLSGEILLEAEMLGKAGN 1886
Query: 963 FREASKLVLNFVFSNSLWSPGSRGWPLKQFTQKEELLQKAKSLAKNDSNQFYEFVCAEAN 1022
+R+AS L L +V SNSLW+ GSRGWPL QF +KEELL KA+ A+ +S FY FVC EA+
Sbjct: 1887 YRDASILFLCYVLSNSLWASGSRGWPLXQFVKKEELLTKARLFAERESKYFYXFVCMEAS 1946
Query: 1023 ILSNDHSNLVMMNQQFIDSKRHQNIRGEILSSRMILDFHLHSNASTYHWEDELVLNLTTY 1082
ILS++ ++L MNQ S RH++++ +A+ + W DE V +L +
Sbjct: 1947 ILSDEQTSLFEMNQCLSTSLRHKSVQ----------------SATKFEWTDEWVYDLKQH 1990
Query: 1083 SDDRICKSQVSIETFVYFWNCWKDKIVKIFEYLGCLRVQQDVDGYRSYEDFCLSYFSVWK 1142
S+ + K + + L + D D R +D +
Sbjct: 1991 SE--------------------QSKNLNVIYAL----LNPDADWVREVDD---RFIRRTG 2023
Query: 1143 HCSNLDTTYLLLKSDAYWVRELSNMYVQKRGQLVSIDLHQLVSAAQSYWSTELLSVGINV 1202
+D + +YW EL S+G V
Sbjct: 2024 RLVYVDGHQFASAAQSYWSSEL-------------------------------FSIGTKV 2052
Query: 1203 LDKLEALHEQSIKNSLSVLCQSKCLSYIYDVAKFLLDSEFLYRHWDDVKTLQKFVELSTE 1262
L+ L+ L+ S SLS+ CQSK L ++++VAKFLL +FL R +TLQKF+ + TE
Sbjct: 2053 LENLKVLYNHSTGKSLSLFCQSKSLIHMFEVAKFLLKLKFLDRRCHAARTLQKFLNILTE 2112
Query: 1263 DFFRCIFPLDWRESLSKDMISLRQTEVCRSILEEIVSGYVTSKSKLSYGQIGRIAVMILG 1322
F +FPLDW++S +++M+SLR+TE+ R + ++ +S ++ K++L++GQIGR+A ILG
Sbjct: 2113 QFCSKVFPLDWKKSSTENMVSLRETELSRILFKKAISTSISMKNELTHGQIGRVASWILG 2172
Query: 1323 SGKLHNGLYRKVVERCVKDSPWQAFLKCLSQKMESEYLQHPSE-SNNERELYVIQKLHGA 1381
+GK LY K+ ER + PW+AF+ LS S + Q +++ + ++ +L A
Sbjct: 2173 TGKQTTELYEKIAERFAVNPPWKAFINNLSGNKGSGFPQGSVPIHESQKHVSLVSRLDEA 2232
Query: 1382 LLDTYGANWRKEYDYMSPAYFLYLLERLLILISCFQGYIFTTKSSFVDWRIYQEPHTNPT 1441
L DTY ANWR+ DY+SP YFLYL++RLLIL++ Q Y FTTKSS+++W I+QE +++P
Sbjct: 2233 LRDTYNANWRQS-DYISPGYFLYLVDRLLILVTSSQEYCFTTKSSYIEWLIFQEWNSSPN 2291
Query: 1442 ASFVTDVWQSFGDVLDSIFFIVQHFLYNEKEMIEWISKSHKN---VNNYHSLVVLRLVVI 1498
FV + FG+ LD + I Q LYN+ + +EWI KS+ N L ++ ++ +
Sbjct: 2292 PGFVANQPFPFGETLDYVARITQELLYNKHDTVEWIRKSNINLEEYYPLLLLRLVIIICL 2351
Query: 1499 ICL-LHLNFGKFGSSLRDLLGRKYVSRLLPLEFCDALRKIENHN--CLNVHEISQAFKKI 1555
+C+ + +N GK+ L LL ++ LP +FCD LR+ N ++++ ++AF+K+
Sbjct: 2352 LCVNVSVNDGKYVGILFHLLEMSDITSQLPQDFCDVLRRRRKRNQFSIDINVFAKAFRKV 2411
Query: 1556 GNPLVIASLGKNCSQFLCPDAIFVNMKVMKSTDEIFGILYPK 1597
+PLVI L ++ S+ CPDAIF++M + +S ++ +L+ +
Sbjct: 2412 DDPLVIVKLQRDSSEVSCPDAIFIDMTLNQSRQDLLRVLFQR 2453
Score = 138 bits (347), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 98/151 (64%), Gaps = 7/151 (4%)
Query: 80 SGLEAMRRAPYAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADF 139
S +E + RAP+A+VI+F E K Y + VD WRN S+ KEPYKT+PGDILVL +
Sbjct: 3 SSMEDIHRAPFAEVISFVESKSDRPLFYDVMVDRWRNRFSDRDKEPYKTMPGDILVLXEA 62
Query: 140 KPEKVSDLRRVGRTWTFVSVTTVP-------DDEDENKKENRYKVKARNNMQVHDKTKKS 192
KPE VSDL+RVGRTWTF VT +P D+++++ ++VK N +V D + S
Sbjct: 63 KPETVSDLQRVGRTWTFALVTKIPEEEDEDEDEDEDDSTSTYFEVKISKNYEVDDAKQSS 122
Query: 193 FFFIYLTNILPNKRIWNSLHMCGNWKVITQV 223
F ++L N + N+RIWN LH+ GN +I++V
Sbjct: 123 MFVVFLINTITNRRIWNVLHLFGNMCIISRV 153
>gi|449445371|ref|XP_004140446.1| PREDICTED: uncharacterized protein LOC101212468 [Cucumis sativus]
Length = 2710
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/811 (51%), Positives = 548/811 (67%), Gaps = 27/811 (3%)
Query: 82 LEAMRRAPYAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKP 141
++ + AP A+V E KPY T Y +VD WRN GKEPYK PGD+ +LAD KP
Sbjct: 1 MDVILAAPCAEVSYLVECKPYNTGLYDCKVDGWRNKFDRIGKEPYKVFPGDVFILADVKP 60
Query: 142 EKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNI 201
E SDL+R+G++W+ V +P+D+ +KVK +N+ + +KS F ++L NI
Sbjct: 61 ELPSDLQRMGKSWSLAIVHKMPEDD---LSSTSFKVKVQNSEMI----EKSMFVVFLFNI 113
Query: 202 LPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQ 261
LP+KRIWN+LHM N ++I ++L +S+ E + S + SF S+LN SQ
Sbjct: 114 LPSKRIWNALHMNVNSEIIRKILCPNSLDAEDFDTSS-----HLYQNLNASFLSSLNASQ 168
Query: 262 VGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITE 321
A+L+ L + + H S V+L+WGPPGTGKTKTVS+LLL L++ +C+T+ PTNVAI E
Sbjct: 169 ERAVLSSLYKTNFEHESNVDLVWGPPGTGKTKTVSVLLLNLMQNRCKTIIVAPTNVAIVE 228
Query: 322 LASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECF 381
+A+RVL LVKE ++ + + GDILLFGNK+RLK+ EE+YL+YR++KL ECF
Sbjct: 229 VATRVLNLVKELHEIEYGPDYLYYSFGDILLFGNKERLKLGSNVEEMYLDYRVQKLLECF 288
Query: 382 APLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKP 441
P++GWRHCF SM DLL DCVSQY+I++E +++ + +++EK C + + K K
Sbjct: 289 DPITGWRHCFGSMTDLLGDCVSQYNIFLENELKQKCLDDKETDEKGCISKDKDDKVASKS 348
Query: 442 FLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVV 501
FL++ RERF LR C+ IF THLP+ I + +++V+L LD F +LLFQ +VV
Sbjct: 349 FLEFARERFMSVASQLRMCLAIFSTHLPRKCILKLGLKDLVSLSKSLDCFEDLLFQQSVV 408
Query: 502 SKELEKLFSHS-VDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKL 560
S LE LF S V EG L + RS CLS L++L SL L LP ++L
Sbjct: 409 SNVLEDLFKCSVVSEGFPTTCTDFACLFDM--ARSGCLSGLKSLHCSLTALKLPRAINRL 466
Query: 561 VLEDFCFKRASLFFSTASSSYKLH------SVEIKPLNFLVIDEAAQLKESESTIPLQLA 614
+E FCF+ ASL FSTASSSY+LH S + LVIDEAAQLKE ES I Q+
Sbjct: 467 SIEHFCFQNASLVFSTASSSYRLHYKYRLDSKSMPSFKVLVIDEAAQLKECESIIAFQIP 526
Query: 615 GINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFP 674
HAVLIGDECQLPAM ++D AGFGRSLF R SL H +HLLN+QYRMHPSIS FP
Sbjct: 527 DFKHAVLIGDECQLPAM----LADNAGFGRSLFARYCSLGHPRHLLNVQYRMHPSISFFP 582
Query: 675 NLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRE--DFIYHSCRNIVEVSA 732
N +FY +QILDG NV+S +Y+K YL G+ FG YSFINI G+E D I HS +N++EV+
Sbjct: 583 NSKFYFSQILDGPNVQSSNYQKNYLLGSMFGPYSFINIKYGKEEKDDIGHSRKNMIEVAV 642
Query: 733 VIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQG 792
+KI+Q LYKAW S++K+SIG++SPY+AQV IR KIG Y+ DGF VKVKS+DGFQG
Sbjct: 643 ALKIVQSLYKAWKNSRRKLSIGIISPYSAQVATIRDKIGHRYDKLDGFWVKVKSVDGFQG 702
Query: 793 GEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVC 852
GEEDIIIISTVR N G S+GF+S QR NVALTRAR+CLWILG+++TL +SES W LVC
Sbjct: 703 GEEDIIIISTVRSNRGSSVGFLSCDQRTNVALTRARYCLWILGNDKTLSNSESSWAHLVC 762
Query: 853 DAKARQCFFNADEERNLAKARLEVSKELVEI 883
DAK R CFFNAD++ NLAKA ++V KE ++
Sbjct: 763 DAKDRGCFFNADDDENLAKAIVDVKKEFNQL 793
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 293/711 (41%), Positives = 448/711 (63%), Gaps = 20/711 (2%)
Query: 905 VKAFRSINLIHKVLNSLGRFDELLMLENGSGNFMEAANMAVLEGDIFLATDLLQKAWNFR 964
VK+FR+++L+ L SL DELL+LE GNF+EA +A +GD+ DLL KA NF
Sbjct: 1807 VKSFRTVDLMRGFLKSLNCLDELLLLEEELGNFLEAVKIAKSKGDLLHVVDLLGKAGNFS 1866
Query: 965 EASKLVLNFVFSNSLWSPGSRGWPLKQFTQKEELLQKAKSLAKNDSNQFYEFVCAEANIL 1024
EASKL++ +V +NSLWSPG +GWPLKQF QKEELL+KAK LA+NDS + Y++ C EA+++
Sbjct: 1867 EASKLLVQYVLANSLWSPGCKGWPLKQFKQKEELLKKAKFLAENDSKKLYDYTCTEADVI 1926
Query: 1025 SNDHSNLVMMNQQFIDSKRHQNIRGEILSSRMILDFHLHSNASTYHWEDELVLNLTTYSD 1084
SN++ +L + +K ++ RGE++ R +LD HL N S Y EDELV +LT +S
Sbjct: 1927 SNENVSLEALAGYLTATKNQKSFRGEMICLRKMLDVHL--NTSKYTLEDELVSDLTKHSK 1984
Query: 1085 DRICKSQVSIETFVYFWNCWKDKIVKIFEYLGCLRVQQDVDGYRSYEDFCLSYFSVWKHC 1144
+ + K+QVS+ET VYFW+CWKD+I+ + E L VD Y Y +FCL +F VW+
Sbjct: 1985 EVVLKNQVSLETLVYFWHCWKDRILSLLESL-TFHGGNAVDIY-PYNEFCLDFFGVWR-- 2040
Query: 1145 SNLDTTYLLLKSDAYWVRELSNMYVQKRGQLVSIDLHQLVSAAQSYWSTELLSVGINVLD 1204
L+ +++LL S+A W + + + + G+LVSID Q +++YW+TEL + G+ VL+
Sbjct: 2041 --LNNSHILLNSNADWAKNVDERFFHRNGKLVSIDAAQFYLFSKNYWTTELRTSGLKVLE 2098
Query: 1205 KLEALHEQSIKNSLSVLCQSKCLSYIYDVAKFLLDSEFLYRHWDDVKTLQKFVELSTEDF 1264
KL+ L++ S K L+ + LS +++VAKFLL++ L + D + L +F +L+T +
Sbjct: 2099 KLDCLYKFSNKCQLTTFHLCRLLSRMFEVAKFLLETTHLNHGYHDKQMLLRFYKLATGEI 2158
Query: 1265 FRCIFPLDWRESLSKDMISLRQTEVCRSILEEIVSGYVTSKSKLSYGQIGRIAVMILGSG 1324
FP D + SL + +I LR T+VC++++ E + V + +YG+IGR+A++ILGS
Sbjct: 2159 QSHFFPPDCQVSLKESLICLRLTDVCQNMMTETIMENVQLTIRPTYGKIGRVAMLILGSR 2218
Query: 1325 KLHNGLYRKVVERCVKDSPWQAFLK--CLSQKMESEYLQHPSESNNERELYVIQKLHGAL 1382
KL L + + ++ PW +F++ C S+ +E+E N +E+ ++ + H AL
Sbjct: 2219 KLDKKLCKSIFNWLRENYPWSSFIQELCNSKSVENE-----PRGNLAKEMALVWRFHEAL 2273
Query: 1383 LDTYGANWRKEYDYMSPAYFLYLLERLLILISCFQGYIFTTKSSFVDWRIYQEPHTNPTA 1442
D Y ANW E DY+SP F+YL+ERLLI++S +GY TTK SF++W I E ++N T
Sbjct: 2274 RDMYNANWVLERDYISPFSFMYLVERLLIMVSSMKGYFITTKFSFIEWLICHEENSNLTY 2333
Query: 1443 SFVTDVWQSFGDVLDSIFFIVQHFLYNEKEMIEWISKSHKNVNNYHSLVVLRLVVIICLL 1502
SF + + I+QH L++ K +W K+H N+ Y+ ++V RLV + CLL
Sbjct: 2334 ILGAQTQHSFQATVKFLANILQHLLFDVKTTKDWTRKTHPNLKEYYPILVRRLVAVTCLL 2393
Query: 1503 HLNFGKFGSSLRDLLGRKYVSRLLPLEFCDALRKIENHNCLNVHEISQ---AFKKIGNPL 1559
+LNFG LR+LLGR Y++ LP EFCDAL + +N C+ ++++ FK IGNP+
Sbjct: 2394 NLNFGICFDVLRNLLGRNYITDCLPSEFCDALGR-KNFFCVETDKMNKFAGFFKAIGNPM 2452
Query: 1560 VIASLGKNCSQFLCPDAIFVNMKVMKSTDEIFGILYPK-MEACQVQVGTSK 1609
VI S G +C QF C DA VN+K+ + ++I +L+PK ++ Q++ T K
Sbjct: 2453 VIVSSGGDCKQFKCRDATHVNLKISRCINDIMKVLFPKEAKSMQIRADTPK 2503
>gi|449526710|ref|XP_004170356.1| PREDICTED: uncharacterized protein LOC101229717 [Cucumis sativus]
Length = 2474
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/811 (51%), Positives = 548/811 (67%), Gaps = 27/811 (3%)
Query: 82 LEAMRRAPYAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKP 141
++ + AP A+V E KPY T Y +VD WRN GKEPYK PGD+ +LAD KP
Sbjct: 1 MDVILAAPCAEVSYLVECKPYNTGLYDCKVDGWRNKFDRIGKEPYKVFPGDVFILADVKP 60
Query: 142 EKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNI 201
E SDL+R+G++W+ V +P+D+ +KVK +N+ + +KS F ++L NI
Sbjct: 61 ELPSDLQRMGKSWSLAIVHKMPEDD---LSSTSFKVKVQNSEMI----EKSMFVVFLFNI 113
Query: 202 LPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQ 261
LP+KRIWN+LHM N ++I ++L +S+ E + S + SF S+LN SQ
Sbjct: 114 LPSKRIWNALHMNVNSEIIRKILCPNSLDAEDFDTSS-----HLYQNLNASFLSSLNASQ 168
Query: 262 VGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITE 321
A+L+ L + + H S V+L+WGPPGTGKTKTVS+LLL L++ +C+T+ PTNVAI E
Sbjct: 169 ERAVLSSLYKTNFEHESNVDLVWGPPGTGKTKTVSVLLLNLMQNRCKTIIVAPTNVAIVE 228
Query: 322 LASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECF 381
+A+RVL LVKE ++ + + GDILLFGNK+RLK+ EE+YL+YR++KL ECF
Sbjct: 229 VATRVLNLVKELHEIEYGPDYLYYSFGDILLFGNKERLKLGSNVEEMYLDYRVQKLLECF 288
Query: 382 APLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKP 441
P++GWRHCF SM DLL DCVSQY+I++E +++ + +++EK C + + K K
Sbjct: 289 DPITGWRHCFGSMTDLLGDCVSQYNIFLENELKQKCLDDKETDEKGCISKDKDDKVASKS 348
Query: 442 FLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVV 501
FL++ RERF LR C+ IF THLP+ I + +++V+L LD F +LLFQ +VV
Sbjct: 349 FLEFARERFMSVASQLRMCLAIFSTHLPRKCILKLGLKDLVSLSKSLDCFEDLLFQQSVV 408
Query: 502 SKELEKLFSHS-VDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKL 560
S LE LF S V EG L + RS CLS L++L SL L LP ++L
Sbjct: 409 SNVLEDLFKCSVVSEGFPTTCTDFACLFDM--ARSGCLSGLKSLHCSLTALKLPRAINRL 466
Query: 561 VLEDFCFKRASLFFSTASSSYKLH------SVEIKPLNFLVIDEAAQLKESESTIPLQLA 614
+E FCF+ ASL FSTASSSY+LH S + LVIDEAAQLKE ES I Q+
Sbjct: 467 SIEHFCFQNASLVFSTASSSYRLHYKYRLDSKSMPSFKVLVIDEAAQLKECESIIAFQIP 526
Query: 615 GINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFP 674
HAVLIGDECQLPAM ++D AGFGRSLF R SL H +HLLN+QYRMHPSIS FP
Sbjct: 527 DFKHAVLIGDECQLPAM----LADNAGFGRSLFARYCSLGHPRHLLNVQYRMHPSISFFP 582
Query: 675 NLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRE--DFIYHSCRNIVEVSA 732
N +FY +QILDG NV+S +Y+K YL G+ FG YSFINI G+E D I HS +N++EV+
Sbjct: 583 NSKFYFSQILDGPNVQSSNYQKNYLLGSMFGPYSFINIKYGKEEKDDIGHSRKNMIEVAV 642
Query: 733 VIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQG 792
+KI+Q LYKAW S++K+SIG++SPY+AQV IR KIG Y+ DGF VKVKS+DGFQG
Sbjct: 643 ALKIVQSLYKAWKNSRRKLSIGIISPYSAQVATIRDKIGHRYDKLDGFWVKVKSVDGFQG 702
Query: 793 GEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVC 852
GEEDIIIISTVR N G S+GF+S QR NVALTRAR+CLWILG+++TL +SES W LVC
Sbjct: 703 GEEDIIIISTVRSNRGSSVGFLSCDQRTNVALTRARYCLWILGNDKTLSNSESSWAHLVC 762
Query: 853 DAKARQCFFNADEERNLAKARLEVSKELVEI 883
DAK R CFFNAD++ NLAKA ++V KE ++
Sbjct: 763 DAKDRGCFFNADDDENLAKAIVDVKKEFNQL 793
Score = 471 bits (1213), Expect = e-129, Method: Compositional matrix adjust.
Identities = 265/634 (41%), Positives = 401/634 (63%), Gaps = 15/634 (2%)
Query: 905 VKAFRSINLIHKVLNSLGRFDELLMLENGSGNFMEAANMAVLEGDIFLATDLLQKAWNFR 964
VK+FR+++L+ L SL DELL+LE GNF+EA +A +GD+ DLL KA NF
Sbjct: 1849 VKSFRTVDLMRGFLKSLNCLDELLLLEEELGNFLEAVKIAKSKGDLLHVVDLLGKAGNFS 1908
Query: 965 EASKLVLNFVFSNSLWSPGSRGWPLKQFTQKEELLQKAKSLAKNDSNQFYEFVCAEANIL 1024
EASKL++ +V +NSLWSPG +GWPLKQF QKEELL+KAK LA+NDS + Y++ C EA+++
Sbjct: 1909 EASKLLVQYVLANSLWSPGCKGWPLKQFKQKEELLKKAKFLAENDSKKLYDYTCTEADVI 1968
Query: 1025 SNDHSNLVMMNQQFIDSKRHQNIRGEILSSRMILDFHLHSNASTYHWEDELVLNLTTYSD 1084
SN++ +L + +K ++ RGE++ R +LD HL N S Y EDELV +LT +S
Sbjct: 1969 SNENVSLEALAGYLTATKNQKSFRGEMICLRKMLDVHL--NTSKYTLEDELVSDLTKHSK 2026
Query: 1085 DRICKSQVSIETFVYFWNCWKDKIVKIFEYLGCLRVQQDVDGYRSYEDFCLSYFSVWKHC 1144
+ + K+QVS+ET VYFW+CWKD+I+ + E L VD Y Y +FCL +F VW+
Sbjct: 2027 EVVLKNQVSLETLVYFWHCWKDRILSLLESL-TFHGGNAVDIY-PYNEFCLDFFGVWR-- 2082
Query: 1145 SNLDTTYLLLKSDAYWVRELSNMYVQKRGQLVSIDLHQLVSAAQSYWSTELLSVGINVLD 1204
L+ +++LL S+A W + + + + G+LVSID Q +++YW+TEL + G+ VL+
Sbjct: 2083 --LNNSHILLNSNADWAKNVDERFFHRNGKLVSIDAAQFYLFSKNYWTTELRTSGLKVLE 2140
Query: 1205 KLEALHEQSIKNSLSVLCQSKCLSYIYDVAKFLLDSEFLYRHWDDVKTLQKFVELSTEDF 1264
KL+ L++ S K L+ + LS +++VAKFLL++ L + D + L +F +L+T +
Sbjct: 2141 KLDCLYKFSNKCQLTTFHLCRLLSRMFEVAKFLLETTHLNHGYHDKQMLLRFYKLATGEI 2200
Query: 1265 FRCIFPLDWRESLSKDMISLRQTEVCRSILEEIVSGYVTSKSKLSYGQIGRIAVMILGSG 1324
FP D + SL + +I LR T+VC++++ E + V + +YG+IGR+A++ILGS
Sbjct: 2201 QSHFFPPDCQVSLKESLICLRLTDVCQNMMTETIMENVQLTIRPTYGKIGRVAMLILGSR 2260
Query: 1325 KLHNGLYRKVVERCVKDSPWQAFLK--CLSQKMESEYLQHPSESNNERELYVIQKLHGAL 1382
KL L + + ++ PW +F++ C S+ +E+E N +E+ ++ + H AL
Sbjct: 2261 KLDKKLCKSIFNWLRENYPWSSFIQELCNSKSVENE-----PRGNLAKEMALVWRFHEAL 2315
Query: 1383 LDTYGANWRKEYDYMSPAYFLYLLERLLILISCFQGYIFTTKSSFVDWRIYQEPHTNPTA 1442
D Y ANW E DY+SP F+YL+ERLLI++S +GY TTK SF++W I E ++N T
Sbjct: 2316 RDMYNANWVLERDYISPFSFMYLVERLLIMVSSMKGYFITTKFSFIEWLICHEENSNLTY 2375
Query: 1443 SFVTDVWQSFGDVLDSIFFIVQHFLYNEKEMIEWISKSHKNVNNYHSLVVLRLVVIICLL 1502
SF + + I+QH L++ K +W K+H N+ Y+ ++V RLV + CLL
Sbjct: 2376 ILGAQTQHSFQATVKFLANILQHLLFDVKTTKDWTRKTHPNLKEYYPILVRRLVAVTCLL 2435
Query: 1503 HLNFGKFGSSLRDLLGRKYVSRLLPLEFCDALRK 1536
+LNFG LR+LLGR Y++ LP EFCDAL +
Sbjct: 2436 NLNFGICFDVLRNLLGRNYITDCLPSEFCDALGR 2469
>gi|359473531|ref|XP_002269567.2| PREDICTED: uncharacterized protein LOC100251075 [Vitis vinifera]
Length = 2818
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/808 (51%), Positives = 552/808 (68%), Gaps = 21/808 (2%)
Query: 81 GLEAMRRAPYAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFK 140
GLE + RAP+A+VI ++++P Y + VDYWRN + +PY+T+PGD+++ AD K
Sbjct: 239 GLELISRAPFAEVICIDKVEPDEELLYNVRVDYWRNRSAGRCLDPYRTVPGDLVIFADSK 298
Query: 141 PEKVSDLRRVGR-TWTFVSVTTVPDDEDENKKENR-YKVKARNNMQVHDKTKKSFFFIYL 198
E SD++ +GR TW F VT V ++E E+ +KV+ D K +F + +L
Sbjct: 299 FETFSDVQCLGRKTWAFALVTEVRENEIEDDGTTVCFKVRVSKERTEGDGKKWTFMY-FL 357
Query: 199 TNILPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLN 258
NI +RIWN+LHM GN +I QVL TDS V E CELC G E FG SS LN
Sbjct: 358 INITTGERIWNALHMSGNLNIIKQVLFTDSKVKESCELCPESSSGVCTENFGTILSSKLN 417
Query: 259 ESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVA 318
+SQ+ A+LA LR++ C H+S VELI GPPGTGKT+T+S LL LL RTL C PT VA
Sbjct: 418 KSQMAAVLASLRKIHCNHKSSVELICGPPGTGKTRTISALLCALLGTNIRTLTCAPTAVA 477
Query: 319 ITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLR 378
+ E+ASRV+K +KES++ D + + +C LGD L FG+ D V +EIYL++R+++L
Sbjct: 478 VKEVASRVMKHLKESFETDPQKDASLCSLGD-LFFGDYDSTGVGSEMKEIYLDHRVERLA 536
Query: 379 ECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGE 438
+CF PL+GWRH F+SMI LE VS+ H+ ++L + E+ ++ EGSKG+
Sbjct: 537 KCFEPLNGWRHSFNSMIVFLEGGVSEDHVSEDELSKMEEGSI------------EGSKGK 584
Query: 439 RKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQD 498
RK +L+ RE+FK + LR + TH+PKS+I E++FQ M++L L SF +LL QD
Sbjct: 585 RKTYLQLAREQFKSTSLHLRELVNTLSTHIPKSFIMEHNFQAMLSLLGFLSSFESLLHQD 644
Query: 499 NVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTS 558
N+VS+ELE LF+ + S V L RSECL +L+NL NSLDEL P
Sbjct: 645 NMVSEELENLFAGKENVKHSSKSVADSSTLMY--IRSECLHILKNLQNSLDELQFPKNIR 702
Query: 559 KLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINH 618
K +L DFCF+ AS FSTAS S+KLH V++KPLN LVIDEAAQL+E ESTIPLQL GI
Sbjct: 703 KDLLIDFCFQTASSIFSTASDSHKLHLVDMKPLNILVIDEAAQLRECESTIPLQLPGIKL 762
Query: 619 AVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQF 678
A+LIGD+ QLP+ V S I D+AGFGRSL+ERL+SL+H+KH LN+QYRMHPSISLFP F
Sbjct: 763 AILIGDKFQLPSRVTSNICDKAGFGRSLYERLSSLDHAKHFLNLQYRMHPSISLFPCSNF 822
Query: 679 YRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRE--DFIYHSCRNIVEVSAVIKI 736
Y NQILD NVK K+YEK+YL F Y FINI GRE D + HS +N+VEV+ ++KI
Sbjct: 823 YANQILDAPNVKHKAYEKKYLPDPVFRLYLFINISCGREEVDEVGHSVKNMVEVAVLMKI 882
Query: 737 LQKLYKAW-VGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEE 795
+Q LY+AW G K+++ IGV+SPYTAQV+ I++++ +YEN D F+VKV++IDGFQGGEE
Sbjct: 883 VQNLYQAWRSGIKEELRIGVLSPYTAQVLEIQERLKQKYENNDMFSVKVQTIDGFQGGEE 942
Query: 796 DIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAK 855
DII+ISTVR N GS+G ++ + NVALTRARHCLWILGSERTL+ SE++W +V DAK
Sbjct: 943 DIILISTVRANNFGSVGVMADVKITNVALTRARHCLWILGSERTLVMSETVWKDIVHDAK 1002
Query: 856 ARQCFFNADEERNLAKARLEVSKELVEI 883
R C NADE+ +LA +V EL E+
Sbjct: 1003 DRHCLLNADEDCDLANTMFKVKAELHEL 1030
Score = 468 bits (1203), Expect = e-128, Method: Compositional matrix adjust.
Identities = 295/775 (38%), Positives = 442/775 (57%), Gaps = 68/775 (8%)
Query: 903 EFVKAFRSINLIHKVLNSLGRFDELLMLENGSGNFMEAANMAVLEGDIFLATDLLQKAWN 962
++V+AF S I L L DELL++E NF+EAAN+A GDI L ++L +A
Sbjct: 1967 KYVRAFHSFESIRTFLRDLCCLDELLLIEKEKENFVEAANIAKCIGDISLEVEMLVEAGC 2026
Query: 963 FREASKLVLNFVFSNSLWSPGSRGWPLKQFTQKEELLQKAKSLAKNDSNQFYEFVCAEAN 1022
++SK +L +V NSLW PGS GWPLKQF +K+EL+ KAK A+ S QFY F+C E +
Sbjct: 2027 LEDSSKAILQYVLVNSLWQPGSEGWPLKQFIRKKELVNKAKVNAERVSKQFYGFICTEVD 2086
Query: 1023 ILSNDHSNLVMMNQQFIDSKRHQNIRGEILSSRMILDFHLH-SNASTYHWEDELVLNLTT 1081
ILS++ S L +N+ F S+ + ++RGEILS+R I+D HLH + + +L LTT
Sbjct: 2087 ILSHEQSTLFELNEYFRSSQNNGSVRGEILSARKIIDAHLHLISILEDRGKSDLYTYLTT 2146
Query: 1082 YSDDRICKSQVSIETFVYFW---NCWKDKIVKIFEYLGCLRVQQDVDGYRSYEDFCLSYF 1138
+S++RI +Q SIET V+FW N WKD+IV I EYLG + Y Y++FCL+Y
Sbjct: 2147 HSEERISSNQFSIETLVHFWKFWNFWKDEIVNILEYLGGA-----IKKYVDYKEFCLNYL 2201
Query: 1139 SVWKHCSNLDTTYLLLKSDAYWVRELSNMYVQKRGQLVSIDLHQLVSAAQSYWSTELLSV 1198
V K + YL+L +A WVR+ + ++ + G+LV ID Q VSAA+SYW ELLSV
Sbjct: 2202 GVLKQPNKRTPLYLVLYPEADWVRKTDDRFLHRNGKLVFIDASQFVSAARSYWCAELLSV 2261
Query: 1199 GINVLDKLEALHEQSIKNSLSVLCQSKCLSYIYDVAKFLLDSEFLYRHWDDVKTLQKFVE 1258
GI +L+ LE L++ +NS V CQS L YI+DV FL+ + L+ +TLQ F+E
Sbjct: 2262 GIKILEILENLYQFCTRNSFPVFCQSIPLIYIFDVTNFLMKTGSLHCWHPHAETLQMFLE 2321
Query: 1259 LSTEDFFRCIFPLDWRESLSKDMISLRQTEVCRSILEEIVSGYVTSKSKLSYGQIGRIAV 1318
S+E FF I+PLDWR+S ++DM+SLR+ ++ ++L E++ ++ K L+YGQIGR +
Sbjct: 2322 KSSERFFGYIYPLDWRKSSTEDMVSLRENKLAGNLLREVILKNISLKGNLTYGQIGRAVM 2381
Query: 1319 MILGSGKLHNGLYRKVVERCVKDSPWQAFLKCLSQKMESEYLQHPSESNNERELYVIQKL 1378
++LGS KL + + E KDSPW+ F+K L SE L S + + EL +I KL
Sbjct: 2382 IMLGSCKLTD----EFAESFNKDSPWKDFIKRLCVTKRSE-LSSKSSAAAQEELSLILKL 2436
Query: 1379 HGALLDTYGANWRKEYDYMSPAYFLYLLERLLILISCFQGYIFTTKSSFVDWRIYQEPHT 1438
+GY+FTTK V+W I+Q+ +T
Sbjct: 2437 R-------------------------------------EGYVFTTKDLVVEWLIFQQWNT 2459
Query: 1439 NPTASFVTDVWQS-----FGDVLDSIFFIVQHFLYNEKEMIEWISKSHKNVNNYHSLVVL 1493
P+AS +TDV S GD + IV L +E+ +EW+ KS+ ++ +Y ++VL
Sbjct: 2460 TPSASSLTDVGASEKTEILGDTYSFMVSIVHELLCDEEGTVEWLEKSNTDLKDY-PVLVL 2518
Query: 1494 RLVVIICLLHLNFGKFGSSLRDLLGRKYVSRLLPLEFCDALRKIENHNCLNVHEISQAFK 1553
RLVVI+CL+ +N GK L DLLGR + LP +F DA + + + V +++A K
Sbjct: 2519 RLVVIMCLICVNSGKHFDLLFDLLGRNCIISHLPKQFYDAFLGRQKRSFVEV--LAEALK 2576
Query: 1554 KIGNPLVIASLGKNCSQFLCPDAIFVNMKVMKSTDEIFGILYPKMEACQVQ-------VG 1606
+I + LVI S G N F PDAI ++ V ++ + I +L+PK + + Q G
Sbjct: 2577 QIESVLVIVSWGNNHFHF-SPDAILLDDVVNQNKEGILRVLFPKNVSSRGQQSLVYSDCG 2635
Query: 1607 TSKDVPSKRPASLPEDTDAQNMNDNT-LVMNLDQLCKVFEALKMVDNGNNGNYRR 1660
+ + S ++ ++ A+N + L N ++ C++F ALK ++N + +
Sbjct: 2636 KASEPDSSNSSTADQNMKARNEAEGKDLQENYERFCEIFNALKPLENAKDAGMEK 2690
>gi|449498392|ref|XP_004160526.1| PREDICTED: uncharacterized protein LOC101225988 [Cucumis sativus]
Length = 1064
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/793 (51%), Positives = 534/793 (67%), Gaps = 24/793 (3%)
Query: 93 VIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRVGR 152
+++ EE K G +++D W+NT +NSGKEPY+TLPGDI ++ D KPE +L+ R
Sbjct: 1 MVSIEEPKSSGKLLLNVKLDVWKNTANNSGKEPYRTLPGDIFLILDDKPETDMNLQCSTR 60
Query: 153 TWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWNSLH 212
TW F SV + D K+ N+ +K FF ++L N+ N RIWNSLH
Sbjct: 61 TWAFASVNKITD----TGCSTNLKLNVSKNISGEHGMQKEFFIVFLMNVTTNLRIWNSLH 116
Query: 213 MCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRL 272
+ K++ VL S+ DE C CS+ EK S SS LN+SQ A+L C+ +
Sbjct: 117 FSEDVKIVKHVLSKSSMGDEICSKCSLYNNVICAEKLRTSLSSVLNDSQKAAVLCCVCKA 176
Query: 273 DCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKE 332
C H+ VELIWGPPGTGKTKT+S LL +L +K R LAC PTNVAITELASRV+KL++E
Sbjct: 177 LCEHKPSVELIWGPPGTGKTKTISFLLWAILEMKQRVLACAPTNVAITELASRVVKLLRE 236
Query: 333 SYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFAPLSGWRHCFS 392
S SR +C LGD+LLFGNKDRLKV EEIY +YR+ +L ECF SGW+ +
Sbjct: 237 S----SREGGVLCSLGDVLLFGNKDRLKVGSELEEIYSDYRVDRLLECFGQ-SGWKSHIT 291
Query: 393 SMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPFLKYVRERFKC 452
S+I+LLE S+YH+++E NVN S K+T + FL+++RE+F
Sbjct: 292 SLINLLESTNSEYHMFLES-------NVNMSRRD---KKTGDNAVAATSFLRFIREKFNT 341
Query: 453 AVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHS 512
V+LR C+ TH+PK +I E++FQ +V L +L+DSFG LL Q+N+ S ++E LFS S
Sbjct: 342 TAVALRGCLQTLITHIPKHFILEHNFQNIVILLNLVDSFGMLLSQENITSTQMEVLFS-S 400
Query: 513 VDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASL 572
+D + F R++CLS+LR L SLD+L LP T +K +++FCF+RASL
Sbjct: 401 LD--VFMEFPNSSVEATFLHLRNQCLSILRFLQASLDQLQLPTTANKKSVKEFCFQRASL 458
Query: 573 FFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMV 632
TASSS++L+ +++ P+ LVIDEAAQLKE ES +PLQL GI HA+LIGDECQLPA+V
Sbjct: 459 ILCTASSSFQLNFMKMDPVKLLVIDEAAQLKECESMVPLQLPGIKHAILIGDECQLPAIV 518
Query: 633 ESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK 692
S++ D AG+GRSLFERL+ L HSKHLLN QYRMHPSIS FPN +FY NQI D V +
Sbjct: 519 SSQVCDAAGYGRSLFERLSLLGHSKHLLNTQYRMHPSISYFPNSKFYSNQITDAPLVMDE 578
Query: 693 SYEKQYLTGTEFGTYSFINIIGGRE--DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQK 750
Y+K+Y+ FG Y+FIN+ G+E D S +N +EV+ VIKI++KLYKAW K +
Sbjct: 579 VYKKRYIPSPMFGPYTFINVSVGKEEGDDDGRSKKNALEVAVVIKIIEKLYKAWRSVKTR 638
Query: 751 VSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGS 810
+SIGV+S Y AQV AI+ ++G +YE +DGFTVKVKS+DGFQGGEED+II+STVR N
Sbjct: 639 LSIGVISFYAAQVTAIQGRLGQKYEKRDGFTVKVKSVDGFQGGEEDVIILSTVRSNRRKK 698
Query: 811 IGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLA 870
IGFIS QR+NVALTRARHCLWI+G TL +S S W A+V DAK RQC+FNA+E+++LA
Sbjct: 699 IGFISNSQRINVALTRARHCLWIVGDATTLGNSNSEWEAVVSDAKDRQCYFNAEEDKDLA 758
Query: 871 KARLEVSKELVEI 883
A +EV K L+E+
Sbjct: 759 DAIIEVKKVLLEL 771
>gi|449487923|ref|XP_004157868.1| PREDICTED: uncharacterized protein LOC101231306 [Cucumis sativus]
Length = 1768
Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/839 (48%), Positives = 543/839 (64%), Gaps = 46/839 (5%)
Query: 49 VEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPYAQVIAFEELKPYGTNQYG 108
V+ IPESF+SV QY G+++FPLLEETR +L L+A+ +AP+A++++ EE K G
Sbjct: 167 VQHIPESFESVHQYLGTYLFPLLEETRAELSLSLKAIHKAPFARLVSIEEPKSGGKLLLD 226
Query: 109 IEVDYWRNTISNSGKEPYKTLPGDILVLADFKP--EKVSDLRRVGRTWTFVSVTTVPDDE 166
+ VD WRNT N GKE Y+TLPGDI ++ D KP E V L+ RTW F P
Sbjct: 227 VSVDSWRNTTKNGGKESYRTLPGDIFLILDEKPNAETVMSLQCSTRTWAFAWAKQNP--- 283
Query: 167 DENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGT 226
EN K+ N+ +K FF ++L +I N RIWNSLH + K+I
Sbjct: 284 -ENGYSAHLKLNFSKNISGEHDMQKEFFIVFLMSITTNLRIWNSLHSSEDAKIIEHG--- 339
Query: 227 DSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGP 286
DE C+ CS+ EK G S SS LN+SQ A+L + + C H VELIWGP
Sbjct: 340 ----DEICDRCSLYNNAVCAEKLGTSLSSVLNDSQSAAVLCSICKTLCDHMPSVELIWGP 395
Query: 287 PGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICP 346
PGTGKTKT+S LL +L + R LAC PTNVAITELA+RV++L++ES S++ +C
Sbjct: 396 PGTGKTKTISFLLCKILEMNQRVLACAPTNVAITELAARVVQLLRES----SKAKGVLCS 451
Query: 347 LGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYH 406
LGD+LLFGNKDRLKV EEIYL+YR+ +L ECF +GW++ + I+L E S+Y
Sbjct: 452 LGDMLLFGNKDRLKVGSELEEIYLDYRVDRLVECFGQ-AGWKYHTTCFINLFESSNSEYL 510
Query: 407 IYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCT 466
I ++ NV S FL ++RE+FK +LR C+ T
Sbjct: 511 ILLKS-------NVQTSPS----------------FLGFIREKFKSTSSALRGCLKTLIT 547
Query: 467 HLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRY 526
H+PK +I E++ Q + L +L+DSFG LL QDNV S++++ L S + F
Sbjct: 548 HIPKQFILEHNIQNIEILLNLIDSFGMLLSQDNVTSEQMKMLLS---SPKVFIDFPNSSV 604
Query: 527 LLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSV 586
+ RS+CLS LR L SL++L P T ++ ++ FCF+RASL TASSS++L+ +
Sbjct: 605 AETILYFRSQCLSSLRTLQASLNQLQFPSTANRESVKKFCFQRASLILCTASSSFQLNFM 664
Query: 587 EIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSL 646
++ P+N LVIDEAAQLKE ES +PLQL GI HA+LIGDECQLPA+V S++ D G+GRSL
Sbjct: 665 KMDPVNLLVIDEAAQLKECESIVPLQLPGIKHAILIGDECQLPAIVSSQVCDAVGYGRSL 724
Query: 647 FERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGT 706
FERL+ L HSKHLLN QYRMHPSIS FPN +FY NQILD V ++ ++K Y+ FG
Sbjct: 725 FERLSLLGHSKHLLNTQYRMHPSISCFPNSKFYSNQILDAPLVMAEVHKKCYIPSPMFGP 784
Query: 707 YSFINIIGGRE--DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVV 764
YSFIN+ G+E D +S +N VEV+ VIKI++KLYKAW G+K ++++GV+S Y AQV
Sbjct: 785 YSFINVSVGKEEGDDDGYSKKNTVEVAVVIKIIEKLYKAWRGAKTRLNVGVISFYAAQVS 844
Query: 765 AIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
I+ ++ +YE FTVKVKS+DGFQGGEED+II++TVR N +IGFIS QR+NVAL
Sbjct: 845 EIQSRLAHKYEKSHNFTVKVKSVDGFQGGEEDVIILTTVRSNRRKNIGFISSSQRINVAL 904
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEI 883
TRARHCLWI+G TL +S S W A+V DAK RQC+FNA E+++ A A +EV K L+E+
Sbjct: 905 TRARHCLWIVGDATTLGNSNSEWEAVVSDAKDRQCYFNAAEDKDFADAIIEVKKVLLEL 963
>gi|449445369|ref|XP_004140445.1| PREDICTED: uncharacterized protein LOC101212224 [Cucumis sativus]
Length = 1855
Score = 766 bits (1978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/863 (47%), Positives = 553/863 (64%), Gaps = 47/863 (5%)
Query: 26 FAGHTVFSWSLEDIFSQSFFK-DQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEA 84
FA + S S I ++ F+ V+ IP+SF+SV QY G+++FPLLEETR +L L+A
Sbjct: 168 FASKELLSKSFYYIAIKNNFEFKTVQHIPDSFESVHQYLGTYLFPLLEETRAELSLSLKA 227
Query: 85 MRRAPYAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKP--E 142
+ +AP+A++++ EE K G + VD WRNT N GKE Y+TLPGDI ++ D KP E
Sbjct: 228 IHKAPFARLVSIEEPKSGGKLLLDVSVDSWRNTTKNGGKESYRTLPGDIFLILDEKPNAE 287
Query: 143 KVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNIL 202
V L+ RTW F P EN K+ N+ +K FF ++L +I
Sbjct: 288 TVMSLQCSTRTWAFAWAKQNP----ENGYSAHLKLNFSKNISGEHDMQKEFFIVFLMSIT 343
Query: 203 PNKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQV 262
N RIWNSLH + K+I DE C+ CS+ EK G S SS LN+SQ
Sbjct: 344 TNLRIWNSLHSSEDAKIIEHG-------DEICDRCSLYNNAVCAEKLGTSLSSVLNDSQS 396
Query: 263 GAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITEL 322
A+L + + C H VELIWGPPGTGKTKT+S LL +L + R LAC PTNVAITEL
Sbjct: 397 AAVLCSICKTLCDHMPSVELIWGPPGTGKTKTISFLLCKILEMNQRVLACAPTNVAITEL 456
Query: 323 ASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFA 382
A+RV++L++ES S++ +C LGD+LLFGNKDRLKV EEIYL+YR+ +L ECF
Sbjct: 457 AARVVQLLRES----SKAKGVLCSLGDMLLFGNKDRLKVGSELEEIYLDYRVDRLVECFG 512
Query: 383 PLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPF 442
+GW++ + I+L E S+Y I ++ NV S F
Sbjct: 513 Q-AGWKYHTTCFINLFESSNSEYLILLKS-------NVQTSPS----------------F 548
Query: 443 LKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVS 502
L ++RE+FK +LR C+ TH+PK +I E++ Q + L +L+DSFG LL QDNV S
Sbjct: 549 LGFIREKFKSTSSALRGCLKTLITHIPKQFILEHNIQNIEILLNLIDSFGMLLSQDNVTS 608
Query: 503 KELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVL 562
++++ L S + F + RS+CLS LR L SL++L P T ++ +
Sbjct: 609 EQMKMLLSSP---EVFIDFPNSSVAETILYFRSQCLSSLRTLQASLNQLQFPSTANRESV 665
Query: 563 EDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLI 622
+ FCF+RASL TASSS++L+ +++ P+N LVIDEAAQLKE ES +PLQL GI HA+LI
Sbjct: 666 KKFCFQRASLILCTASSSFQLNFMKMDPVNLLVIDEAAQLKECESIVPLQLPGIKHAILI 725
Query: 623 GDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQ 682
GDECQLPA+V S++ D G+GRSLFERL+ L HSKHLLN QYRMHPSIS FPN +FY NQ
Sbjct: 726 GDECQLPAIVSSQVCDAVGYGRSLFERLSLLGHSKHLLNTQYRMHPSISYFPNSKFYSNQ 785
Query: 683 ILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRE--DFIYHSCRNIVEVSAVIKILQKL 740
ILD V ++ ++K Y+ FG YSFIN+ G+E D +S +N VEV+ VIKI++KL
Sbjct: 786 ILDAPLVMAEVHKKCYIPSPMFGPYSFINVSVGKEEGDDDGYSKKNTVEVAVVIKIIEKL 845
Query: 741 YKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIII 800
YKAW G+K ++++GV+S Y AQV I+ ++ +YE FTVKVKS+DGFQGGEED+II+
Sbjct: 846 YKAWRGAKTRLNVGVISFYAAQVSEIQSRLAHKYEKSHNFTVKVKSVDGFQGGEEDVIIL 905
Query: 801 STVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
+TVR N +IGFIS QR+NVALTRARHCLWI+G TL +S S W A+V DAK RQC+
Sbjct: 906 TTVRSNRRKNIGFISSSQRINVALTRARHCLWIVGDATTLGNSNSEWEAVVSDAKDRQCY 965
Query: 861 FNADEERNLAKARLEVSKELVEI 883
FNA E+++ A A +EV K L+E+
Sbjct: 966 FNAAEDKDFADAIIEVKKVLLEL 988
>gi|358349482|ref|XP_003638765.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
gi|355504700|gb|AES85903.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
Length = 1644
Score = 765 bits (1975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/893 (45%), Positives = 573/893 (64%), Gaps = 54/893 (6%)
Query: 11 MEGKGCSSSSKKA----VGFAGHTVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSF 66
ME G SS+KKA GF +FSWS+EDI + +K++VEK+ SF+SV Y GS+
Sbjct: 1 MERGG--SSNKKAPYNDYGFMD-LIFSWSIEDILDEDLYKNKVEKVGLSFRSVTHYLGSY 57
Query: 67 VFPLLEETRMQLRSGLEAMRRAPYAQVIAFEELKPYGTNQ------------YGIEVDYW 114
+PLLEETR L S +E + +APY +V + KP+ Y ++++ W
Sbjct: 58 KYPLLEETRAALSSSMELIHQAPYGRVFGLKLAKPFNNENGNETENPCKNKLYNLKIEGW 117
Query: 115 RNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKENR 174
+N EPYKTLPGD+LVLADFKPE ++D +R GR W+F++V D+ + +K +
Sbjct: 118 KNRFIRG--EPYKTLPGDVLVLADFKPESMNDFQRFGRMWSFLTVVRTEDENESDKMDAV 175
Query: 175 -YKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWNSLHMC-GNWKVITQVL-GTDSVVD 231
KVKA ++ + + K F ++LTN+ ++ W+ LHM GN K++ Q+L D V
Sbjct: 176 CLKVKASKDLDLDELRYKPLFIVFLTNVGSYRKAWSGLHMTDGNLKLVRQILCNGDDEVK 235
Query: 232 ERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGK 291
C+ C+ WD+ SS LNE+Q A+ CL + C H + V+L+WGPPGTGK
Sbjct: 236 GSCD-CTSLYDAMWDDCSYRRLSSDLNEAQNTAISNCLSGIHCSHNATVKLVWGPPGTGK 294
Query: 292 TKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDIL 351
TKT+ +L L+++K R L C PTNVAI E+ASRVL + +ES C GD+L
Sbjct: 295 TKTLGTMLFILMKMKYRILVCAPTNVAIKEVASRVLHIARESQ----------CSAGDML 344
Query: 352 LFGNKDRLKV-NPGFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVE 410
LFGN DRL V + E+I+L+ R++KLR+C + +GWR+C SMI + C S Y +++E
Sbjct: 345 LFGNNDRLDVGSEEIEDIFLDNRVRKLRKCLSSFTGWRNCLISMIHFFKSCASDYKMFIE 404
Query: 411 KLKEREDCNVNQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPK 470
E + + + K + + FL ++RERF L++CI + CTH+P
Sbjct: 405 N----EILKLTKPDNKSYKLTS---------FLDFLRERFLPRADQLKDCISMLCTHVPM 451
Query: 471 SYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQL 530
I E+++ ++V L + L+SF +LFQ+N+ S EL+ LFS+ ++ ++ + K +
Sbjct: 452 CIILEHNYWKLVYLNAALESFQKMLFQENLSSDELKMLFSN-LEMPVNSSLYFKGTAEHV 510
Query: 531 HQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKP 590
++R+ECLS L + +SLD L L T + DFCFK +S+ F TASSS++LH++ +KP
Sbjct: 511 FKKRNECLSALETVKDSLDRLELKRFTDDESVSDFCFKNSSIIFCTASSSFRLHTISMKP 570
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
+N LVIDEAAQLKE ES +PL L I+HA+L+GDECQLP+MV S + AGFGRSLFERL
Sbjct: 571 INLLVIDEAAQLKECESIVPLLLPRISHAILVGDECQLPSMVRSNVCSVAGFGRSLFERL 630
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFI 710
+ L K+LLN Q+RMHP ISLFPN FY N+I D NV+ ++Y K+YL G FGTYSFI
Sbjct: 631 SLLGSPKNLLNTQHRMHPEISLFPNSYFYSNKINDSPNVQ-RNYGKKYLPGPMFGTYSFI 689
Query: 711 NIIGGREDF--IYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
N+ GGRE+F S +NI EV+ V+ IL+ L+K W+ K+K+SIG+VSPY QV+ I++
Sbjct: 690 NVAGGREEFDDDGRSYKNIAEVAVVMTILKNLHKVWLAKKEKLSIGIVSPYAGQVLKIQE 749
Query: 769 KIG-FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
K+ Y + DGF V VKSIDGFQGGE+DIII+STVR N S+ FIS PQR NVALTRA
Sbjct: 750 KLAMMNYSSHDGFNVNVKSIDGFQGGEQDIIILSTVRTNYRTSLQFISSPQRTNVALTRA 809
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKEL 880
R+CLWILG+ER L+++ ++W ALV D+K R FF+ D+ +AKA L+ KEL
Sbjct: 810 RYCLWILGNERALVNNNNVWRALVIDSKNRGLFFSTDQNPEMAKAVLDSMKEL 862
>gi|147802044|emb|CAN66065.1| hypothetical protein VITISV_025023 [Vitis vinifera]
Length = 2275
Score = 743 bits (1919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/757 (51%), Positives = 513/757 (67%), Gaps = 19/757 (2%)
Query: 132 DILVLADFKPEKVSDLRRVGR-TWTFVSVTTVPDDEDENKKENR-YKVKARNNMQVHDKT 189
D+++ AD K E SD++ +GR TW F VT V ++E E+ +KV+ D
Sbjct: 31 DLVIFADAKLETFSDIQCLGRKTWAFALVTEVRENEIEDDGTTVCFKVRVSKERTEGDGK 90
Query: 190 KKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKF 249
K F +L NI +RIWN+LHM GN +I QVL TDS V E CELC G E F
Sbjct: 91 NKWTFMYFLINITTGERIWNALHMSGNLNIIKQVLFTDSTVKESCELCPESSSGVRTENF 150
Query: 250 GPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRT 309
G SS LN+SQ+ A+LA LR++ C H+S VELI GPPGTGKT+T+S LL LL RT
Sbjct: 151 GTILSSKLNKSQMAAVLASLRKIHCNHKSSVELICGPPGTGKTRTISALLCALLGTNIRT 210
Query: 310 LACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIY 369
L C PT VA+ E+ASRV+K +KES++ D + + IC LGD+L FG+ D V +EIY
Sbjct: 211 LTCAPTAVAVKEVASRVMKHLKESFETDPQKDASICSLGDLLFFGDYDSTAVGSEMKEIY 270
Query: 370 LNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECR 429
L++R+++L +CF PL+GWRH F+SMI LE VS+ + ++L + E+ ++
Sbjct: 271 LDHRVERLAKCFEPLNGWRHSFNSMIVFLEGGVSEDRVSEDELSKMEEGSI--------- 321
Query: 430 KETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLD 489
+GSKG+RK +L+ RE+FK ++LR + TH+PKS+I E++FQ M++L L
Sbjct: 322 ---DGSKGKRKTYLQLAREQFKSTSLNLREVVITLSTHIPKSFIMEHNFQAMLSLLGFLR 378
Query: 490 SFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLD 549
SF LL QDN+VS+ELE LF+ + S V L + RSECL +L+NL NSLD
Sbjct: 379 SFEFLLHQDNMVSEELENLFAGKKNVKHSSKSVADSSTLM--EIRSECLHILKNLRNSLD 436
Query: 550 ELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTI 609
EL P SK +L DFCF+ AS FSTAS S+KLH V++KPLN LVIDEAAQL+E ESTI
Sbjct: 437 ELQFPKNNSKDLLIDFCFQTASSIFSTASDSHKLHLVDMKPLNILVIDEAAQLRECESTI 496
Query: 610 PLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPS 669
PLQL GI A+LIGD+ QLP+ V S I D AGFGRSL+ERL+SL+H+KH LN+QYRMHPS
Sbjct: 497 PLQLPGIKLAILIGDKFQLPSRVTSNICDRAGFGRSLYERLSSLDHAKHFLNLQYRMHPS 556
Query: 670 ISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRE--DFIYHSCRNI 727
ISLFP FY NQILD NVK K+YEK+YL F Y FINI GRE D + HS +N+
Sbjct: 557 ISLFPCSNFYANQILDAPNVKHKAYEKKYLPDPVFRPYLFINISCGREEVDEVGHSVKNM 616
Query: 728 VEVSAVIKILQKLYKAW-VGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKS 786
VEV+ ++KI+Q LY+ W G K+++ IGV+S YTAQV+ I+++ +YEN D F+VKV++
Sbjct: 617 VEVAVLMKIVQNLYQDWRSGIKEELRIGVLSXYTAQVLEIQERXXQKYENNDRFSVKVQT 676
Query: 787 IDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESI 846
IDGFQGGEEDII+ISTVR N GS+G ++ + NVALTRARH LWILGSERTL+ SE++
Sbjct: 677 IDGFQGGEEDIILISTVRANNFGSVGVMADVKITNVALTRARHGLWILGSERTLVMSETV 736
Query: 847 WGALVCDAKARQCFFNADEERNLAKARLEVSKELVEI 883
W +V DAK R C NADE+ +LA +V EL E+
Sbjct: 737 WKDIVHDAKDRHCLLNADEDCDLANTIFKVKAELDEL 773
Score = 251 bits (642), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 134/299 (44%), Positives = 191/299 (63%), Gaps = 9/299 (3%)
Query: 917 VLNSLGRFDELLMLENGSGNFMEAANMAVLEGDIFLATDLLQKAWNFREASKLVLNFVFS 976
++ L DELL++E NF+EAAN+A GDI L ++L +A ++SK +L +V
Sbjct: 1582 MMKDLSCLDELLLIEKEKENFVEAANIAKCIGDISLEVEMLVEAGCLEDSSKAILQYVLV 1641
Query: 977 NSLWSPGSRGWPLKQFTQKEELLQKAKSLAKNDSNQFYEFVCAEANILSNDHSNLVMMNQ 1036
NSLW PGS GWPLK F +K+EL+ KAK A+ S QFY F+C E +ILS+ S L +N+
Sbjct: 1642 NSLWQPGSEGWPLKHFIRKKELVNKAKVNAERVSKQFYGFICTEVDILSHKRSTLFELNE 1701
Query: 1037 QFIDSKRHQNIRGEILSSRMILDFHLHSNASTY-HWEDELVLNLTTYSDDRICKSQVSIE 1095
F S+ + ++RGEILS+R I+D HLH ++ + +L LT +S++RI +Q SIE
Sbjct: 1702 YFRSSQNNGSVRGEILSARKIIDAHLHLISTLEDRGKSDLYTYLTAHSEERISSNQFSIE 1761
Query: 1096 TFVY---FWNCWKDKIVKIFEYLGCLRVQQDVDGYRSYEDFCLSYFSVWKHCSNLDTTYL 1152
T V+ FWN WKD+IV I EYLG + Y Y++FCL+Y V K + YL
Sbjct: 1762 TLVHFWKFWNFWKDEIVNILEYLG-----GAIKKYVDYKEFCLNYLGVLKQPNKRTPLYL 1816
Query: 1153 LLKSDAYWVRELSNMYVQKRGQLVSIDLHQLVSAAQSYWSTELLSVGINVLDKLEALHE 1211
+L +A WVR + ++Q+ G+LV ID Q SAA+SYW +ELLSVG+ +L+ LEAL++
Sbjct: 1817 VLNPEADWVRXTDDRFLQRNGKLVFIDASQFASAARSYWCSELLSVGVKILENLEALYQ 1875
Score = 114 bits (286), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 134/262 (51%), Gaps = 17/262 (6%)
Query: 1412 LISCFQGYIFTTKSSFVDWRIYQEPHTNPTASFVTDVWQS-----FGDVLDSIFFIVQHF 1466
L + +QGY+FTTK+ V+W I+ + T +AS +TDV S GD + IV
Sbjct: 1870 LEALYQGYVFTTKALVVEWLIFPQGKTTLSASSLTDVGASEKTEILGDTYSFMASIVHEL 1929
Query: 1467 LYNEKEMIEWISKSHKNVNNYHSLVVLRLVVIICLLHLNFGKFGSSLRDLLGRKYVSRLL 1526
L + + +EW+ KS+ N +Y ++VLRLVVI+CL+ +N GK L DLL R + L
Sbjct: 1930 LCDVEGTVEWLEKSNTNSMDY-PVLVLRLVVIMCLICVNSGKHFDLLFDLLDRNCIISHL 1988
Query: 1527 PLEFCDALRKIENHNCLNVHEISQAFKKIGNPLVIASLGKNCSQFLCPDAIFVNMKVMKS 1586
P F DA + + + V +++A K+I + LVI S G N F PDAI V+ V ++
Sbjct: 1989 PKXFYDAFLGRQKRSFVEV--LAEALKQIESVLVIVSWGNNHFHF-SPDAILVDDVVNQN 2045
Query: 1587 TDEIFGILYPKMEACQVQ-------VGTSKDVPSKRPASLPEDTDAQN-MNDNTLVMNLD 1638
+ I +L+ K + + Q G + S ++ + +N N L N +
Sbjct: 2046 KEGILRVLFTKNVSXRGQQSLIYSDCGKGSEPDSSNSSTADLNMKVRNEAEGNDLQENYE 2105
Query: 1639 QLCKVFEALKMVDNGNNGNYRR 1660
C++F ALK ++N + +
Sbjct: 2106 HFCEIFNALKPLENAKDAGMEK 2127
>gi|449463400|ref|XP_004149422.1| PREDICTED: uncharacterized protein LOC101220392 [Cucumis sativus]
Length = 877
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/852 (47%), Positives = 535/852 (62%), Gaps = 86/852 (10%)
Query: 59 VKQYFGSFVFPLLEETRMQLRSGLEAMRRAPYAQVIAFEELKPYGTNQYGIEVDYWRNTI 118
++ YFGSF +PLLEETR QL S + + ++P +VI+ +E+KPYG + I + ++
Sbjct: 1 MEHYFGSFKYPLLEETRTQLCSSMNPISKSPCVEVISIKEIKPYGKGLFNIHIRDCKDC- 59
Query: 119 SNSGKEPYKTLPGDILVLADFKPEKVSDLRR----VGRTWTFVSVTTVPDD--EDENKKE 172
P +PG+I +L++ K VSDL R ++WTF + + E+E +
Sbjct: 60 ------PTILMPGNIFILSNVKSYVVSDLERDNNNNAKSWTFATKFWAKGNNLEEEFLSD 113
Query: 173 N---RYKVKARNN---MQVHDKTK-KSFFFIYLTNILPNKRIWNSLHMCGNWK------- 218
N R+ VK N + + +KTK K F + L N+L N RIWN+LHM
Sbjct: 114 NDPTRFSVKTWNKDFEIPMDEKTKNKPMFLVILVNVLSNIRIWNALHMIKRTSKHSSASS 173
Query: 219 --VITQVLG-TDSV--VDERCELCSVQRKGQWDEKFGPSFS------STLNESQVGAMLA 267
+ QVLG DS +D C+ C + G SFS STLNE Q A+
Sbjct: 174 SMIFNQVLGLKDSCNNLDFSCDACEAE--------VGMSFSHNDDLFSTLNEPQARAVQR 225
Query: 268 CLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVL 327
CL + C H+S +ELIWGPPGTGKTKTV++LLL + R L C PTN AI ++ASR+L
Sbjct: 226 CLEKASCAHKSSIELIWGPPGTGKTKTVAVLLLQFRKNNHRVLTCAPTNTAIMQVASRLL 285
Query: 328 KLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFAPLSGW 387
LVKE ++++ S C L DILL GN+ RLK+ + I+L+YR+++L +CF+ SGW
Sbjct: 286 SLVKEMHEKEYGSGELFCNLSDILLIGNETRLKLEECDKYIHLDYRVERLGKCFSQFSGW 345
Query: 388 RHCFSSMIDLLED-CVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGER--KPFLK 444
HCF+SM+D L+ CV Y E KG + K F++
Sbjct: 346 SHCFASMVDFLQGRCVFDY--------------------------DEDQKGPKRFKNFIE 379
Query: 445 YVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKE 504
+VR ++K L+ CI I CTH+PK+ + N F+ + L SL+DS LF + VVSK
Sbjct: 380 FVRTQYKTLAYPLKECISILCTHIPKTILLHN-FERLGCLMSLMDSLEASLFSNWVVSK- 437
Query: 505 LEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLED 564
KLFS ++E Y +L + ++C+ VL +L +SL L LP T+ K +ED
Sbjct: 438 --KLFSTKLEEKEEVMKNNDEYK-KLLKEINDCVLVLNSLKHSLSRLKLPQTSCKRDVED 494
Query: 565 FCFKRASLFFSTASSSYKLHSVE-IKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIG 623
FCF+ ASLFF T SSS+KL+S + PL LVIDEAAQLKE E+ IPLQ I HA+LIG
Sbjct: 495 FCFENASLFFCTVSSSFKLYSRRTMAPLETLVIDEAAQLKECEAAIPLQFPSIKHAILIG 554
Query: 624 DECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQI 683
DECQLPAMVESKI+DEAGFGRSLFERL+SL H KHLLN+Q+RMHPSIS FPN +FY N+I
Sbjct: 555 DECQLPAMVESKIADEAGFGRSLFERLSSLGHQKHLLNVQHRMHPSISYFPNSKFYANKI 614
Query: 684 LDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRE--DFIYHSCRNIVEVSAVIKILQKLY 741
LDG NVK+K+YEK++L G FG+YSFI+I G+E D I S +N+VEV V KI+ LY
Sbjct: 615 LDGPNVKTKAYEKKFLHGPMFGSYSFIDINEGKEEKDGITQSWKNMVEVDVVGKIIHNLY 674
Query: 742 KAWV---GSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDII 798
KA SK+K+S+GVVSPY AQV AI++ IG +Y N F+VKV S+DGFQGGE+DII
Sbjct: 675 KASCVDRHSKEKISVGVVSPYLAQVEAIKENIGRDYSNCSSFSVKVSSVDGFQGGEKDII 734
Query: 799 IISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQ 858
IISTVR N SIGF+S QR NVALTRAR+CLWILG+ TL +S+SIWG LV DA R
Sbjct: 735 IISTVRSNRSSSIGFLSSNQRTNVALTRARYCLWILGNFTTLSNSDSIWGELVFDAMKRS 794
Query: 859 CFFNADEERNLA 870
CFF A+E+R+LA
Sbjct: 795 CFFQANEDRDLA 806
>gi|449526409|ref|XP_004170206.1| PREDICTED: uncharacterized protein LOC101231716, partial [Cucumis
sativus]
Length = 804
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/852 (47%), Positives = 537/852 (63%), Gaps = 95/852 (11%)
Query: 59 VKQYFGSFVFPLLEETRMQLRSGLEAMRRAPYAQVIAFEELKPYGTNQYGIEVDYWRNTI 118
++ YFGSF +PLLEETR QL S + + ++P +VI+ +E+KPYG + I + ++
Sbjct: 1 MEHYFGSFKYPLLEETRTQLCSSMNPISKSPCVEVISIKEIKPYGKGFFNIHIRDCKDC- 59
Query: 119 SNSGKEPYKTLPGDILVLADFKPEKVSDLRR----VGRTWTFVSVTTVPDD--EDENKKE 172
P +PG+I +L++ KP VSDL R ++WTF + + E+E +
Sbjct: 60 ------PTILMPGNIFILSNVKPYVVSDLERDNNNNAKSWTFATKFWAKGNNLEEEFLSD 113
Query: 173 N---RYKVKARNN---MQVHDKTK-KSFFFIYLTNILPNKRIWNSLHMCGNWK------- 218
N R+ VK N + + +KTK K F + L N+L N RIWN+LHM
Sbjct: 114 NDPTRFSVKTWNKDFEIPMDEKTKNKPMFLVILVNVLSNIRIWNALHMIKRTSKHSSASS 173
Query: 219 --VITQVLG-TDSV--VDERCELCSVQRKGQWDEKFGPSFS------STLNESQVGAMLA 267
+ QVLG DS +D C+ C + K G SFS STLNE Q A+
Sbjct: 174 SMIFNQVLGLKDSCNNLDFSCDAC--------EAKVGMSFSHNDDLFSTLNEPQARAVQR 225
Query: 268 CLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVL 327
CL + C H+S +ELIWGPPGTGKTKTV++LLL + R L C PTN AI ++ASR+L
Sbjct: 226 CLEKTSCAHKSSIELIWGPPGTGKTKTVAVLLLQFRKNNHRVLTCAPTNTAIMQVASRLL 285
Query: 328 KLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFAPLSGW 387
LVKE ++++ S C L DILL GN+ RLK+ + I+L+YR+++L +CF+ SGW
Sbjct: 286 SLVKEMHEKEYGSGELFCNLSDILLIGNETRLKLEECDKYIHLDYRVERLGKCFSQFSGW 345
Query: 388 RHCFSSMIDLLED-CVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGER--KPFLK 444
HCF+SM+D L+ CV Y E KG + K F++
Sbjct: 346 SHCFASMVDFLQGRCVFDY--------------------------DEDQKGPKRFKNFIE 379
Query: 445 YVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKE 504
++R ++K L+ CI I CTH+PK+ + N F+ + L SL+DS LF ++ +E
Sbjct: 380 FLRTQYKTLAYPLKECISILCTHIPKTILLHN-FERLGCLMSLMDSLEASLF--SIKLEE 436
Query: 505 LEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLED 564
E++ ++ DE ++ + L +++ +C+ VL +L +SL L LP T+ K +ED
Sbjct: 437 KEEVMENN-DE------IKDKLLKEIN----DCVLVLNSLKHSLSRLKLPQTSCKRDVED 485
Query: 565 FCFKRASLFFSTASSSYKLHSVE-IKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIG 623
FCF+ ASLFF T SSS+KL+S + PL LVIDEAAQLKE E+ IPLQ I HA+LIG
Sbjct: 486 FCFENASLFFCTVSSSFKLYSRRTMAPLETLVIDEAAQLKECEAAIPLQFPSIKHAILIG 545
Query: 624 DECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQI 683
DECQL AMVESKI+DEAGFGRSLFERL+SL H KHLLN+Q+RMHPSIS FPN +FY N+I
Sbjct: 546 DECQLRAMVESKIADEAGFGRSLFERLSSLGHQKHLLNVQHRMHPSISYFPNSKFYANKI 605
Query: 684 LDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRE--DFIYHSCRNIVEVSAVIKILQKLY 741
LDG NVK+K+YEK++L G FG+YSFI+I G+E D I S +N+VEV V KI+ LY
Sbjct: 606 LDGPNVKTKAYEKKFLHGPMFGSYSFIDINEGKEEKDGITQSWKNMVEVDVVGKIIHNLY 665
Query: 742 KAWV---GSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDII 798
KA SK+K+S+GVVSPY AQV AI++ IG +Y N F+VKV S+DGFQGGE+DII
Sbjct: 666 KASCVDRHSKEKISVGVVSPYLAQVEAIKENIGRDYSNCSSFSVKVSSVDGFQGGEKDII 725
Query: 799 IISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQ 858
IISTVR N SIGF+S QR NVALTRAR+CLWILG+ TL +S+SIWG LV DA R
Sbjct: 726 IISTVRSNRSSSIGFLSSNQRTNVALTRARYCLWILGNFTTLSNSDSIWGELVFDAMKRS 785
Query: 859 CFFNADEERNLA 870
CFF A+E+R+LA
Sbjct: 786 CFFQANEDRDLA 797
>gi|359490550|ref|XP_002266964.2| PREDICTED: uncharacterized protein LOC100244982 [Vitis vinifera]
Length = 1076
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/942 (41%), Positives = 565/942 (59%), Gaps = 89/942 (9%)
Query: 4 ESQSEEMMEGKGCSSSSKKAVGFAGHTVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYF 63
+ Q E + K ++ K +G VFSWSL+DI +++ +K++V+ IP++F SV Y
Sbjct: 22 DDQKMERKQWKKAETAPKDLMGL----VFSWSLKDILNKNLYKNKVKMIPDTFLSVSHYL 77
Query: 64 GSFVFPLLEETRMQLRSGLEAMRRAPYAQVIAFEELKPY--GTN-QYGIEVDYWRNTISN 120
SF++PL+EET L S + + +AP ++++ E K Y TN +Y I + RN ++
Sbjct: 78 TSFIYPLIEETHADLLSSMTMVSQAPLCEILSVETTKDYEPPTNLKYKITLKVIRNNGND 137
Query: 121 SGKEPYKTLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKE-------- 172
+ E Y+ GD++ L D +P+ +SDL R ++T SV P + +
Sbjct: 138 A--EIYEPETGDLIALTDVRPKCISDLNRPKISYTVASVVAKPVRDPDEPPPEEDTCIVL 195
Query: 173 NRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWNSLHM---CGNWKVITQVLGTDSV 229
+ ++ NM+ +K +K+ F ++L N++ N RIW +L++ GN +I +VL DS+
Sbjct: 196 SSKPIEFEQNMET-NKKRKTLFAVFLINMITNNRIWAALNIGPDLGNKSIIQKVLQPDSL 254
Query: 230 VDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGT 289
E C LCS E SF LN+SQ A+L+C+ +C H++ ++ IWGPPGT
Sbjct: 255 AGEECALCSSDSVSN-SEPMVSSFD--LNDSQKAAVLSCIAARECHHQNSIKQIWGPPGT 311
Query: 290 GKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGD 349
GKTKTV+ LL L R+KCRT+ C PTN+A+ + R++ LV++S + + LGD
Sbjct: 312 GKTKTVATLLFALYRMKCRTVTCAPTNIAVLTVTERLVGLVRDSNEYGTYG------LGD 365
Query: 350 ILLFGNKDRLKVNP--GFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHI 407
ILLFGN R+K++ +++L++R+K L CF+P SGW+H SMI LLED Y
Sbjct: 366 ILLFGNGKRMKIDDHRDLHDVFLDFRVKILANCFSPRSGWKHSLESMICLLEDPKEMYST 425
Query: 408 YV-EKLKEREDCNVNQSEEKECRKE----------------------------------- 431
Y+ E++ + + NQ +E++ + +
Sbjct: 426 YLRERMNQGKGVQTNQEKEEDIQSQSFNKDGRKNKKSWMRKDIERTLKNSKKGKGKKQQD 485
Query: 432 ------TEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALK 485
T+GS + ++ +++F V +L+ CI THLP S I + M+
Sbjct: 486 KNSEGATDGSCDKLLTLEEFFKKKFYDIVNNLKFCIPKLRTHLPTSLIPLEVAKNMIGAH 545
Query: 486 SLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLW 545
LL+SF L +V SK L+++ D G S + H+ R + L +LR L
Sbjct: 546 RLLESFITLFQNVSVESKGLKEVIEKIGDAGKSVD-----RFCKFHKTRRKFLEILRCLR 600
Query: 546 NSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKES 605
+++ +P TT ++ FC + A+L F TASSS K+ V KP+ LVIDEAAQLKE
Sbjct: 601 QAIE---VPNTTDHYRIKSFCLQNATLLFCTASSSAKI-PVGGKPIELLVIDEAAQLKEC 656
Query: 606 ESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYR 665
ES IPLQ++GI HA+LIGDE QLPAMV+SKIS+EA FGRSLF+RL L H KHLLN+QYR
Sbjct: 657 ESAIPLQISGIRHAILIGDELQLPAMVKSKISEEAKFGRSLFQRLVLLGHRKHLLNLQYR 716
Query: 666 MHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIY-HSC 724
MHPSISLFPN +FY N ILD NVK + YE+ YL G +G+YSFIN+ G+E+F Y +S
Sbjct: 717 MHPSISLFPNREFYDNLILDAPNVKERKYERSYLHGNMYGSYSFINVAYGKEEFDYRYST 776
Query: 725 RNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEY-ENKDG-FTV 782
RN+VEV V +++ L KA G KQ+VS+G++SPY AQV AI+ ++G +Y + DG F+V
Sbjct: 777 RNMVEVVVVSEMVATLAKATKGRKQRVSVGIISPYKAQVYAIQDRLGKKYTSSADGKFSV 836
Query: 783 KVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLIS 842
V+S+DGFQGGEEDIIIISTVRCN GS+GFIS QR NVALTRAR+CLWI G+ TL
Sbjct: 837 SVRSVDGFQGGEEDIIIISTVRCNLKGSVGFISNRQRTNVALTRARYCLWIFGNGPTLEH 896
Query: 843 SESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIG 884
S ++WG LV DAK R CF NA+E+ NLA+A ++ LVE+G
Sbjct: 897 SGTVWGKLVNDAKDRGCFHNAEEDNNLARA---ITTSLVELG 935
>gi|449443986|ref|XP_004139756.1| PREDICTED: uncharacterized protein LOC101214715 [Cucumis sativus]
gi|449521497|ref|XP_004167766.1| PREDICTED: uncharacterized LOC101214715 [Cucumis sativus]
Length = 737
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/625 (55%), Positives = 432/625 (69%), Gaps = 32/625 (5%)
Query: 256 TLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPT 315
TLNESQ A+ CL R+ C H+ GVELIWGPPGTGKTKTV +LL L + RTLAC PT
Sbjct: 72 TLNESQARAVGTCLNRISCVHKYGVELIWGPPGTGKTKTVGVLLFELRKKNRRTLACAPT 131
Query: 316 NVAITELASRVLKLVKESY-KRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRI 374
N AI ++ASR L LVKE + K+D+ S C LGDILLFGNK+RLKV + IYL+YRI
Sbjct: 132 NTAIMQVASRFLLLVKEMHDKKDNGSKGLFCNLGDILLFGNKERLKVGESDKYIYLDYRI 191
Query: 375 KKLRECFAPLSGWRHCFSSMIDLLED-CVSQYHIYVEKLKEREDCNVNQSEEKECRKETE 433
+L++CF L+GWR CFSSMID LE CVSQY +++ K+R
Sbjct: 192 GRLKKCFNQLNGWRFCFSSMIDFLEGHCVSQYRTFLKDHKQR------------------ 233
Query: 434 GSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGN 493
SK F+++VR +K SL+ CI IFCTH+P + + N F+ + + SL++SF +
Sbjct: 234 -SKMVEYSFIEFVRMHYKTISRSLKECISIFCTHIPIAILKHN-FERLSCVMSLINSFES 291
Query: 494 LLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNL 553
LL + V SKELEKLF V+E + + +L + R++C+ VLR+L SL EL L
Sbjct: 292 LLLSNGVQSKELEKLFLKKVEEEVVED--QNVEYEKLLKGRNDCVLVLRSLEYSLSELRL 349
Query: 554 PCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVE-IKPLNFLVIDEAAQLKESESTIPLQ 612
P T+SK L FCF+ ASLFF T SSS++L+S+ + PL LV+DEAAQLKE ES IPLQ
Sbjct: 350 PQTSSKGGLRKFCFRNASLFFCTVSSSFRLYSMRNVAPLETLVMDEAAQLKECESAIPLQ 409
Query: 613 LAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISL 672
I HA+LIGDECQLPAMVESK++DEA FGRSLFERL+ L + KHLLN+QYRMHPSIS
Sbjct: 410 FPAIKHAILIGDECQLPAMVESKVADEAKFGRSLFERLSLLGYQKHLLNVQYRMHPSISC 469
Query: 673 FPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRE--DFIYHSCRNIVEV 730
FPN +FY NQI DG NVK++ Y K++L G FG+YSF++I GRE D I S +N+VEV
Sbjct: 470 FPNSKFYSNQISDGPNVKTEGYVKKFLNGPMFGSYSFMDINEGREEKDGITQSWKNMVEV 529
Query: 731 SAVIKILQKLYK-----AWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVK 785
V++I+ KLY V S +K+SIGVVSPY+AQV AI K+G Y + F V+V
Sbjct: 530 DVVLQIIHKLYNKGTSTTCVDSNEKISIGVVSPYSAQVAAIEHKLGRNYNKCNSFQVRVS 589
Query: 786 SIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSES 845
S+DGFQGGEEDIIIISTVR N SIGF+S QR NVALTRAR+CLWILG+ TL S+S
Sbjct: 590 SVDGFQGGEEDIIIISTVRSNRSSSIGFLSSNQRTNVALTRARYCLWILGNFNTLSKSDS 649
Query: 846 IWGALVCDAKARQCFFNADEERNLA 870
+W LV DAK R CFFNA E+++LA
Sbjct: 650 VWEDLVFDAKNRGCFFNAKEDKDLA 674
>gi|224077408|ref|XP_002305249.1| predicted protein [Populus trichocarpa]
gi|222848213|gb|EEE85760.1| predicted protein [Populus trichocarpa]
Length = 1101
Score = 629 bits (1622), Expect = e-177, Method: Compositional matrix adjust.
Identities = 381/934 (40%), Positives = 536/934 (57%), Gaps = 99/934 (10%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
VFSWS++D+ +Q+ +KD+V KIPE+F SV Y SF+ PLLEETR L S + + AP
Sbjct: 11 VFSWSVQDVLNQNLYKDKVRKIPETFPSVTHYRSSFILPLLEETRSDLCSSMMTVSSAPV 70
Query: 91 AQVIAFEELKPYG-TNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRR 149
+++ E+ Y N +V + + +GKE Y GD+LVLA+ P+ + DL
Sbjct: 71 CEILYIEKSGDYKEPNDLIYDVGVNKMNDAENGKEVYVPENGDLLVLAEVWPKCIGDLSW 130
Query: 150 VGRTWTFVSVTTVPDDEDENKKENRY---KVKARNNMQVHDKTKKSFFFIYLTNILPNKR 206
++ V E E+ E + K +MQ H K +K+ F ++LTN+ N R
Sbjct: 131 FNESYKIALVQRKKRFEHEDYDEIQILSSKPIKEQDMQQHTK-QKTRFSVFLTNMKTNVR 189
Query: 207 IWNSLHMCG--NWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSF--SSTLNESQV 262
IW +L + G N +I QVL TDS V + C C ++ K D ++ S LN SQ
Sbjct: 190 IWKALSLLGEGNMNIIQQVLQTDSSVVDNCANCFIREKHNVDASTLGAYIRSFDLNASQE 249
Query: 263 GAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITEL 322
A+L+C+ +C HR+ V+LIWGPPGTGKTKT+ LL + KCRTL C PTNVA+ E+
Sbjct: 250 EAVLSCICARECHHRNSVKLIWGPPGTGKTKTIGALLFAFFKRKCRTLTCAPTNVAVLEV 309
Query: 323 ASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKV--NPGFEEIYLNYRIKKLREC 380
+R+L LV + + LGDI+LFGN +R+K+ + +++L+ R L C
Sbjct: 310 TTRLLNLVIPKLEYQTYG------LGDIILFGNGERMKICNHDDLLDVFLDCRAHILSNC 363
Query: 381 FAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKER------------------------- 415
AP SGW + MI LLED YH Y+++L R
Sbjct: 364 LAPSSGWNYHLRLMICLLEDPGKLYHEYLQELANRKKDKNFKAQEKGILRNEKIQNNKEK 423
Query: 416 -EDCNVNQS------------------------EEKECRKETEGSKGERK---------- 440
+D N +S +EK C ++ K RK
Sbjct: 424 QDDVNSKKSRNQNNNVFWRKVILQTLEESKKTWKEKSCCRKESRLKHNRKVDMVHFSQDH 483
Query: 441 -----PFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLL 495
F ++V +F +R + I THLP S IS + M+ L+ +LL
Sbjct: 484 EIEGLTFEEFVNCKFNYCKDQMRMHVVIMHTHLPSSVISPRVVKMMIEFLEFLELLDSLL 543
Query: 496 FQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPC 555
+ L FS S+DE F ++ +L + R CL +L+ L + + LP
Sbjct: 544 ---QAADEGLSHAFSQSMDEPYGIGFSKQH---KLEEAREHCLKLLKLLHS---KFTLPD 594
Query: 556 TTSKLVLEDFCFKRASLFFSTASSSYKLHSVEI--KPLNFLVIDEAAQLKESESTIPLQL 613
+ + ++ FC ++A L F TASSS KL++ ++ L L+IDEAAQLKE ESTIPLQ
Sbjct: 595 ISGESKIKLFCLEKARLIFCTASSSAKLYAEDMLRSSLEVLIIDEAAQLKECESTIPLQF 654
Query: 614 AGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLF 673
G+ HA+L+GDECQLPAMV+SKIS++A FGRSLF RL L H KHLLN+QYRMHPSISLF
Sbjct: 655 PGLRHAILVGDECQLPAMVQSKISEKAEFGRSLFLRLAQLGHKKHLLNVQYRMHPSISLF 714
Query: 674 PNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDF-IYHSCRNIVEVSA 732
PN++FY QILD VK +SYEK +L G +G+YSFIN+ G E+ HS +N+VEV+
Sbjct: 715 PNVEFYGKQILDAPLVKERSYEKCFLQGKMYGSYSFINVDYGHEEADDRHSRKNVVEVAV 774
Query: 733 VIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG--FEYENKDGFTVKVKSIDGF 790
V +I+ KL++ V K+ +S+GV+SPY+AQV AI++K+G + +GF+V V+S+DGF
Sbjct: 775 VSEIVAKLFEESVSMKETLSVGVISPYSAQVSAIQEKLGKTLSRGSGNGFSVSVRSVDGF 834
Query: 791 QGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGAL 850
QGGEEDII+ISTVRC+ G +GF+ PQR NVALTRAR+CLWI+G+ TL +S+S+W +
Sbjct: 835 QGGEEDIIVISTVRCDLMGLVGFLKSPQRTNVALTRARYCLWIVGNGVTLGNSDSVWERM 894
Query: 851 VCDAKARQCFFNADEERNLAKARLEVSKELVEIG 884
V DAK R F+NADE+ +LA+A + LVE+G
Sbjct: 895 VIDAKTRGYFYNADEDESLAQA---IIAALVEVG 925
>gi|357460649|ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase A [Medicago
truncatula]
gi|355489654|gb|AES70857.1| DNA polymerase alpha-associated DNA helicase A [Medicago
truncatula]
Length = 950
Score = 617 bits (1591), Expect = e-173, Method: Compositional matrix adjust.
Identities = 377/904 (41%), Positives = 525/904 (58%), Gaps = 78/904 (8%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
VFSW+ D+ +Q+F + +VEKIP +F +V Y SF+ L+EET L S L + RAP+
Sbjct: 19 VFSWTFNDVRNQNFCRHKVEKIPHTFMTVTNYLNSFIPSLVEETHSDLSSSLYGVNRAPF 78
Query: 91 AQVI--AFEELKPYGTNQ---YGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVS 145
+++ E K + +++ Y I V +N + G PY+ GD++ L DFKP+ V
Sbjct: 79 CEILIATPERSKSFISSKFLLYQISVSRTKNDTEDVG--PYQPEVGDLIALTDFKPKTVE 136
Query: 146 DLRRVGRTWTFVSVTTVPDDEDE----NKKENRYKVKARNNMQVHDKTKKSFFFIYLTNI 201
DL R R + V + E + K +V + N ++ ++ K + +YL N+
Sbjct: 137 DLNRPRRYYHIAYVYGSKESSGEISILSSKCIDMEVDS-NYLRSNNAPK--LYAVYLLNL 193
Query: 202 LPNKRIWNSLHM---CGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSF----- 253
N RIW +L+ +I +VL DS E C+LC + + D
Sbjct: 194 TTNIRIWKALNSELEGAKMNMIKKVLQADSNNGENCQLC-IYGENHIDIAACSKVHTMIQ 252
Query: 254 SSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACT 313
S LNESQ A+L+ + +C H ++LIWGPPGTGKTKTV+ LL +LL+ K RTL C
Sbjct: 253 SENLNESQKDAVLSSVSMRECHHSDTIKLIWGPPGTGKTKTVASLLFSLLKFKARTLTCA 312
Query: 314 PTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVN--PGFEEIYLN 371
PTN A+ E+A+R+ LV++S + D + LGDI++FGN+ R+KV+ ++I+L+
Sbjct: 313 PTNTAVLEVAARLQNLVEKSLEHDVDTYG----LGDIVIFGNRSRMKVDCYRCLQDIFLD 368
Query: 372 YRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIY---------------------VE 410
YR+ L CFAP +GW+H SMI LLE+ +Y +Y VE
Sbjct: 369 YRVSNLLRCFAPFTGWKHYLESMIALLENPSKKYGMYKLDAENSIMSLEQFTMLKHEEVE 428
Query: 411 ------KLKERED--CNVNQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIF 462
K E+ D + Q +KE E K F ++V+ RF V L+ C
Sbjct: 429 LAYSSYKQHEKNDDPLTLAQFVKKEYHSYKEDKKNSIMTFEQFVKMRFSSIVAELKLCKK 488
Query: 463 IFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEK-LFSHSVDEGISWAF 521
THLP S F+EM + LD +L + ++ +L++ L H E I
Sbjct: 489 TLYTHLPTSLF---PFEEMKKIPIALDLLTSL--ESSMCKAKLKQTLDDHGDGESIFDCL 543
Query: 522 VRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSY 581
R L+ +C+ +LR+L L +++LP T K +E FC ASL F TASSS
Sbjct: 544 GR------LNNTTEDCVCLLRSL---LKKISLPNITEKYEIEKFCLMNASLIFCTASSST 594
Query: 582 KLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAG 641
+L + + P+ FLVIDEAAQLKE ES IPLQL G++HAVLIGDE QLPA+V+S +++EAG
Sbjct: 595 RLFTEGMTPIKFLVIDEAAQLKECESAIPLQLPGLHHAVLIGDERQLPAVVKSTVTEEAG 654
Query: 642 FGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTG 701
+GRSLFERL SL + KHLLN QYRMHPSISLFPN +FY Q++D V+ SY + +L G
Sbjct: 655 YGRSLFERLVSLGYKKHLLNTQYRMHPSISLFPNKEFYEEQLVDAPIVREMSYNRCFLEG 714
Query: 702 TEFGTYSFINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYT 760
+ +YSFINI G+E HS +N+VE + + KI+ L + + +++KVSIG++SPY
Sbjct: 715 KMYASYSFINIAKGKEQRGRGHSSKNMVEAAVISKIIGSLKEEFHRTRKKVSIGIISPYN 774
Query: 761 AQVVAIRKKIGFEYENKD-GFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQR 819
AQV I++KI D F+V V+S+DGFQGGEEDIIIISTVR N IGF+S QR
Sbjct: 775 AQVYEIQEKIKPNNSISDPNFSVSVRSVDGFQGGEEDIIIISTVRSNEDAKIGFLSNRQR 834
Query: 820 VNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKE 879
NVALTRARHCLWILG+E TL S+SIW LV DAK R CF NADE++ LA+A +
Sbjct: 835 ANVALTRARHCLWILGNETTLEKSDSIWKELVLDAKERGCFHNADEDKKLAEA---IEDA 891
Query: 880 LVEI 883
L+EI
Sbjct: 892 LLEI 895
>gi|359490546|ref|XP_002267062.2| PREDICTED: uncharacterized protein LOC100262126 [Vitis vinifera]
Length = 1095
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 383/933 (41%), Positives = 538/933 (57%), Gaps = 87/933 (9%)
Query: 21 KKAVGFAGH---TVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQ 77
++ G G+ VFSWSL+++ ++F+K QV KIP F S Y SF+ LLEE R
Sbjct: 7 RRVTGTGGNLTDVVFSWSLDNVLDENFYKRQVGKIPMEFLSKPVYMTSFIPALLEEIRAD 66
Query: 78 LRSGLEAM-----RRAPYAQVIAFEELKPYGT--NQYGIEVDYWRNTISNSGKEPYKTLP 130
L S ++ + P +V EE YG N Y I + R ++ + YK
Sbjct: 67 LLSSMKTVFEDHASDPPVREVQFVEESTRYGPPKNLYNISLKGER--VAENDAVTYKPEN 124
Query: 131 GDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTK 190
GDI+ L D +P + D +R R++ + D DE + + ++ NMQ D +
Sbjct: 125 GDIIALTDTRPNSIDDSKRSERSYLIAFIQGSRKDSDEFQIVSSKPIEFEQNMQ-EDGKR 183
Query: 191 KSFFFIYLTNILPNKRIWNSLHMC---GNWKVITQVLGTDSVVDERCELCSVQRKGQWDE 247
+ + ++L N+ N IWNSL G+ +I +VL +S RC++CS G +
Sbjct: 184 NTLYAVFLINLTTNICIWNSLTQGLQGGSMAIIEKVLRPNSYAGGRCKICS---SGSVSD 240
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC 307
S LN SQ A+L+CL +C H++ VELI GPPGTGKT TV LL LL +KC
Sbjct: 241 SVARINSFKLNRSQKAAVLSCLATANCHHQNSVELIKGPPGTGKTNTVGSLLCALLGMKC 300
Query: 308 RTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKV--NPGF 365
RTLAC PTN+A+ E+A+RVL LV+ES + D+ LGDI+LFG+ + + + +
Sbjct: 301 RTLACAPTNIAVLEVAARVLSLVEESLEYDAYG------LGDIVLFGSSEGMNIDDDSDL 354
Query: 366 EEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVE--------KLKERE- 416
+++L+ R + L CFA SGW+HC SMI+LLE +Y+E + KE++
Sbjct: 355 HDVFLDTRARILVRCFARHSGWKHCLESMINLLEGTKEDRILYMEDRTNKDNNRHKEKKH 414
Query: 417 DCNVNQSEEKECRKETEGSKGERKPFLKYV--------------RERFKCAVVSLRNCIF 462
+ + + E+ E KE E + P K + +ER + V S
Sbjct: 415 EKGILEDEKLEICKEREEVQYFEDPKSKKIWKMVGGQTSKGKKNKER-QPKVPSPETDKL 473
Query: 463 IFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQD--NVVSKEL----EKLFSHSVDEG 516
++ K +++N VA D + F + + V ++L E L++H
Sbjct: 474 LYGAKEDKGELTQNK-NNRVATGGHHDFLMSEKFVERFDFVGEQLKLFTEALYTHLPTSF 532
Query: 517 ISWAFVRKRY-LLQLHQRRSE----------CLSVLRNLWNSLDEL--NLPCTTSKLVLE 563
IS V+ L L +R E C +L L+++ +E +L C K+ L
Sbjct: 533 ISLEVVKDMVRALDLLERLKEVLHECEDVGKCADLLPELYSTREECLQSLKCLCKKITLP 592
Query: 564 D---------FCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLA 614
+ FC ++A L F TASSS KL + P+ LVIDEAAQLKE ESTIPLQ++
Sbjct: 593 NFYTDDKIKKFCLEKACLLFCTASSSVKLKMKGMTPVELLVIDEAAQLKECESTIPLQIS 652
Query: 615 GINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFP 674
G+ HA+L+GDE QLPA+V+SKIS++AGFGRSLFERL L H HLLNIQYRMHPSIS FP
Sbjct: 653 GLRHAILVGDEMQLPALVKSKISEKAGFGRSLFERLVLLKHEYHLLNIQYRMHPSISFFP 712
Query: 675 NLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVI 734
N +FY NQI D NVK +SYEKQ+L G+ +G YSF+N+ G+E+F HS RN+VEV+ V
Sbjct: 713 NKEFYENQISDAPNVKDRSYEKQFLQGSMYGPYSFVNVAYGKEEFENHSSRNMVEVAVVS 772
Query: 735 KILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEY---ENKDGFTVKVKSIDGFQ 791
+++ L+K V KQKVS+GV+SPY AQV+AI++K+G Y E +D F+VKV ++DGFQ
Sbjct: 773 EVVTSLFKESVSKKQKVSVGVISPYKAQVIAIQEKLGKIYNTDEERD-FSVKVCTVDGFQ 831
Query: 792 GGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
GGEED+IIISTVR N G +GF+SK QR NV+LTRARHCLWI G TL++S ++W +V
Sbjct: 832 GGEEDVIIISTVRGNEKGLVGFLSKRQRANVSLTRARHCLWIFGESETLVASGTVWKRVV 891
Query: 852 CDAKARQCFFNADEERNLAKARLEVSKELVEIG 884
DAK R CF+NA E+NLA+A ++ LVE G
Sbjct: 892 EDAKERGCFYNASAEKNLAQA---MAISLVEQG 921
>gi|297841151|ref|XP_002888457.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297334298|gb|EFH64716.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1058
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 356/877 (40%), Positives = 509/877 (58%), Gaps = 95/877 (10%)
Query: 30 TVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRA- 88
VFSWSL D+ S + +K +V KIP +F S K+YF SFV P++EET L S + +RRA
Sbjct: 25 VVFSWSLRDVLSSNLYKGKVGKIPNTFTSTKEYFESFVNPIIEETHADLLSSMGTIRRAQ 84
Query: 89 --PYAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSD 146
+ ++ ++ KP Y + + + ++N G+ + D++ + D +P ++ D
Sbjct: 85 AFKFWEIKPGKDFKPPKDLYYEVTLQMVNDNVANGGQNLLEF--NDLIAVTDKRPIRIDD 142
Query: 147 LRRVGRTWTFVSVTTVPD----------------DEDENKKENRYKVKARNNMQVHDKTK 190
LR V V + ++D++K+ + + K ++ +
Sbjct: 143 LRCSNEPHLLALVCGVNENNPHLITILASKPIIFEDDDDKRTSTKRGKG-------ERKR 195
Query: 191 KSFFFIYLTNILPNKRIWNSLHM---CGNWKVITQVLGTDSVVDE-RCELCSVQRKGQWD 246
SFF + L N++ N RIW++LH GN K+I++VL +++ VD C C +
Sbjct: 196 LSFFGVNLINMMTNIRIWSALHPHPEGGNLKLISRVLQSNNEVDGGSCVACKENSENVVS 255
Query: 247 EKFGPSFSS-TLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI 305
+ S LN SQ A+L+CL C H + ++LIWGPPGTGKTKT S+LLL LL++
Sbjct: 256 DHSARMLRSFKLNSSQEDAILSCLEAKSCYHSNNIKLIWGPPGTGKTKTTSVLLLNLLKM 315
Query: 306 KCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGF 365
+CRTL C PTN+A+ E+ SR++KLV ES + LGDI+LFGNK+R+K++
Sbjct: 316 RCRTLTCAPTNIAVLEVCSRLVKLVSESLRFGGYG------LGDIVLFGNKERMKIDDRE 369
Query: 366 E--EIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQS 423
+ +++L YR+++L CF ++GWR + MI LL D +Y R+ +VN++
Sbjct: 370 DLFDVFLEYRVEELYRCFMAMTGWRANVNRMICLLSDPQREY---------RQFNSVNKT 420
Query: 424 EEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVA 483
F ++V ER L++ C HLP + +S ++M
Sbjct: 421 S---------------LSFKEFVEERLSRLRNDLQHQFTTLCLHLPTTLLSFRVAEKMNQ 465
Query: 484 LKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRY--------LLQLHQRRS 535
LL S + +G R++Y L+ R
Sbjct: 466 TNDLLRDIS----------------VSDVMGDGKKSCHGRRKYNRKDTGDERLENDSREQ 509
Query: 536 ECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLV 595
+CL +L ++ S+ NLP SK L+ C A L F TASSS KLH P+ LV
Sbjct: 510 DCLKMLTSISTSI---NLPDFISKFELKILCLDNAYLLFCTASSSAKLHMSS--PIQLLV 564
Query: 596 IDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNH 655
IDEAAQLKE ES IPLQL G+ HA+LIGDE QLPAM++SKI+ EA GRSLFERL L H
Sbjct: 565 IDEAAQLKECESAIPLQLPGLQHAILIGDEKQLPAMIKSKIASEADLGRSLFERLVLLGH 624
Query: 656 SKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGG 715
+K LLN+QYRMHPSIS+FPN +FY +ILD +V+ +SYEK++L FG YSFINI G
Sbjct: 625 NKQLLNMQYRMHPSISIFPNREFYDMKILDAPSVRLRSYEKKFLPEKMFGPYSFINIAYG 684
Query: 716 REDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEY 774
RE F +S +N+VEVS V +I+ KLY + + +S+GV+SPY AQV AI+++IG Y
Sbjct: 685 REQFGEGYSSKNVVEVSVVAEIVSKLYSVSRKTGRSISVGVISPYKAQVFAIQERIGEMY 744
Query: 775 ENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWIL 834
+ FTV V+S+DGFQGGEEDIIIISTVR N G+IGF+S QR NVALTRAR+CLWIL
Sbjct: 745 NTEGTFTVSVRSVDGFQGGEEDIIIISTVRSNGKGAIGFLSNQQRTNVALTRARYCLWIL 804
Query: 835 GSERTLISSESIWGALVCDAKARQCFFNADEERNLAK 871
G+E TL +++S+W LV DA+AR CF +A+E+++LA+
Sbjct: 805 GNEATLTNNKSVWRQLVVDAQARNCFHDAEEDKSLAQ 841
>gi|357143184|ref|XP_003572832.1| PREDICTED: LOW QUALITY PROTEIN: helicase sen1-like [Brachypodium
distachyon]
Length = 924
Score = 605 bits (1559), Expect = e-169, Method: Compositional matrix adjust.
Identities = 371/914 (40%), Positives = 537/914 (58%), Gaps = 75/914 (8%)
Query: 31 VFSWSLEDIFSQSFFK-------DQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLE 83
+FSWSL+++ +++ FK + V+K+P +F S+K+Y GSF PL+EETR L S LE
Sbjct: 36 MFSWSLQEVLNRNLFKKKASRSSEPVKKVPSTFTSLKEYMGSFTVPLIEETRADLSSALE 95
Query: 84 AMRRAPYAQVIAFEELKPYGTNQ-YGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPE 142
++ AP + + E L + I V I N G E Y D+L+L D KP+
Sbjct: 96 GIKHAPATEFVRIEGLSSDSEQSIFSILVKKADPKI-NPG-EVYALKDADVLLLTDQKPK 153
Query: 143 KVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFF-----IY 197
+S L G + + +V ED N + + + VH++ + F ++
Sbjct: 154 HISQL---GSSKVRYVIASVLKAEDANGR----AIVRLSGRPVHERGGRGEFVLPLVAVF 206
Query: 198 LTNILPNKRIWNSLHM---CG-NWKVITQVLGTDSVVDERCELCSVQRKGQWD-EKFGPS 252
L N+ RIWN+L + C N +I +++ DE EL + D E F
Sbjct: 207 LINMTTYNRIWNALDVEVACHRNTSIIAKIVNYAPREDE-SELPLYLPDRELDVENF--- 262
Query: 253 FSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLAC 312
LN SQ A+L CL ++ V LIWGPPGTGKTKT+S LL +++ RTL C
Sbjct: 263 ---KLNGSQRRAVLDCLI-MEQPDTCQVRLIWGPPGTGKTKTISTLLWSMMVKNHRTLTC 318
Query: 313 TPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNY 372
PTN A+ E+ASRVL LV++S S+ C L D++LFGN+DR+ V+ +I+L
Sbjct: 319 APTNTAVVEVASRVLSLVEDSC---GGSSGKKCFLSDVVLFGNEDRMNVDQSPGKIFLEK 375
Query: 373 RIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKET 432
R+++L++C P +GW +C SSM+ +LE+ + QY YV+++ ERE + + E++E K+
Sbjct: 376 RVRRLQKCLMPGAGWTNCLSSMVRILEEPLPQYDSYVQQI-EREIEELARQEKEERAKKD 434
Query: 433 EGSKGERKPFLKYVRE------------RFKCAVVSLRNCIFIFCTHLPKSYISENSFQE 480
+ E K L + +K SL NCI IFC LP+S + +F+
Sbjct: 435 KNKMVEAKEDLAKKKRIQKMSFKDDFLSHYKEVESSLANCIEIFCNDLPRSATAGQNFRY 494
Query: 481 MVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGIS-------WAFVRKRYLLQLHQR 533
M + LL FG L + K+LE LF +G + +V+ +L Q
Sbjct: 495 MTEVLRLLKEFGRLAQHEP--DKQLETLFRIRDTDGETSCLFRSLVVYVQDSVRTELKQA 552
Query: 534 RSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVE-IKPLN 592
RS + L +L N+ D LP K +EDF + TASSS +LH ++ +P +
Sbjct: 553 RSLGIERLNDLSNNFD---LPEVYEKRSIEDFLLRSCKSVLCTASSSSRLHYLQKAEPFD 609
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS 652
LV+DEAAQLKE ES +PLQ+ GI AVL+GDE QLPA+V+SK+ ++A FGRSLFERL+S
Sbjct: 610 LLVVDEAAQLKECESLLPLQIPGIRLAVLVGDEYQLPALVKSKVCEDACFGRSLFERLSS 669
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L H KHLL++QYRMHP IS FP FY ++I DG NV + YE+++LTG +G+YSFINI
Sbjct: 670 LGHPKHLLDVQYRMHPGISKFPVSSFYESRITDGENVLKRDYERKHLTGPMYGSYSFINI 729
Query: 713 IGGREDF--IYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
GG+E S N +EV+AV +I+Q+L+K + +++K+S+GVVSPY QV AI++K+
Sbjct: 730 EGGKESTGKFDKSLVNTIEVAAVTRIVQRLFKECMETRRKLSVGVVSPYKGQVRAIQEKL 789
Query: 771 GFEYENKDG-FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
G YE + G F+VKV+S+DGFQG EEDIIIISTVR N GS+GF++ R NVALTRA+H
Sbjct: 790 GKTYEVRPGEFSVKVRSVDGFQGAEEDIIIISTVRSNAAGSVGFLNNVNRTNVALTRAKH 849
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKEL--------V 881
CLWILG+ TL+SS++IW +V DAK R CFFNA+++ +L++A ++ EL +
Sbjct: 850 CLWILGNATTLVSSKTIWQKIVADAKDRGCFFNANDDNDLSRAIIKAVIELDEVENVLNM 909
Query: 882 EIGAESLTSTSQGG 895
E+GA + S+ G
Sbjct: 910 EMGALRIGGGSRSG 923
>gi|414585634|tpg|DAA36205.1| TPA: hypothetical protein ZEAMMB73_541257 [Zea mays]
Length = 2606
Score = 604 bits (1557), Expect = e-169, Method: Compositional matrix adjust.
Identities = 349/867 (40%), Positives = 504/867 (58%), Gaps = 78/867 (8%)
Query: 28 GHTVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRR 87
G V SWS+++I + +K +VE+IP SF S+ Y S++ PL+EETR L S LE +
Sbjct: 8 GDIVLSWSVQEITNDDLYKTKVERIPFSFGSLDDYLRSYMTPLIEETRSCLNSCLELIAE 67
Query: 88 APYAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDL 147
AP +++++F+ G + ++VD+W N S E Y GDI VL++ KPE D
Sbjct: 68 APSSKILSFKVAGKSGL--HSMDVDFWDNGAGFS-TETYTARNGDIFVLSNMKPEAADDF 124
Query: 148 RRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRI 207
R G T+ VT V +++ K +KVK N+ + K +L NI+ N RI
Sbjct: 125 NRYGLTYCLAMVTEVSMNDEYQKG---FKVKVSNSTGLEGDFSKLVHATFLDNIMANMRI 181
Query: 208 WNSL----HMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVG 263
W +L M N+ +I +L ++ ++ C +C+ + P + LN+SQ+
Sbjct: 182 WKALCFDSSMNNNFTIIKSLLAPRNMGEDVCSVCAKKDDCLMSSAELPPVN--LNQSQLD 239
Query: 264 AMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELA 323
A+ + + + C H + +LIWGPPGTGKTKTVS LL L +KCRTL CTPTNVA+ +
Sbjct: 240 AIESIISAVRCRHLNLTKLIWGPPGTGKTKTVSALLWALACLKCRTLTCTPTNVAVVGVC 299
Query: 324 SRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFAP 383
+R L+ +KE K+ P+ LGD+LL GN+D + ++ +E++L+YR+ +L ECF+
Sbjct: 300 TRFLQNLKEFSKQIDICGLPL-SLGDVLLLGNRDNMDISEEIQEVFLDYRVDELTECFSL 358
Query: 384 LSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPFL 443
LSGWRH SMI E+C S+Y + +E + + C FL
Sbjct: 359 LSGWRHIIVSMISFFEECGSRYDMLLE---------CDGGSDSVC-------------FL 396
Query: 444 KYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSK 503
+++++F A +++ C+ HLPK S + + + LL+ L ++ +
Sbjct: 397 DFLKKQFDVAAKAVKKCMMTLWVHLPKKCFSHENVSNISMVLRLLEKINAFLCDGDLTDE 456
Query: 504 ELEKLFS-----HSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTS 558
++ F +S+ E IS ++ K +L RS CL +L++L +SL NLP
Sbjct: 457 SAKRGFDFRSTENSIYEPIS--YIEK----ELGDARSLCLKLLKDLQSSL---NLP---- 503
Query: 559 KLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINH 618
ASSSY+LH+ EI PL+ L++DEAAQ+KE E IPL+L + H
Sbjct: 504 -----------------VASSSYRLHNAEIAPLDMLIVDEAAQVKECELVIPLRLCWLKH 546
Query: 619 AVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQF 678
VL+GD+CQL +V EAGFG SLFERL LN KHLLNIQYRM P ISLFPN +F
Sbjct: 547 VVLVGDDCQLRPLV----CKEAGFGISLFERLVILNFEKHLLNIQYRMSPCISLFPNAKF 602
Query: 679 YRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRE--DFIYHSCRNIVEVSAVIKI 736
Y +ILDG NV S SY K TG FG+Y+FINI GRE + +S +N+VEV+ V+ +
Sbjct: 603 YDKKILDGPNVHS-SYNKD-CTGLLFGSYAFINITDGREQKEGAGNSWQNLVEVAVVMHL 660
Query: 737 LQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEED 796
++ ++K+W Q +SIGVVSPY++QV AI+ ++G +Y+ D F V+VKSIDGFQG E+D
Sbjct: 661 IRTIFKSWRKRDQGISIGVVSPYSSQVAAIKDRLGKKYDTSDNFHVRVKSIDGFQGEEDD 720
Query: 797 IIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKA 856
III+STVR N G++GF++ QR NVALTRARHCLWILG+ TL S ++W LV DA+
Sbjct: 721 IIILSTVRSNERGNVGFLADIQRTNVALTRARHCLWILGNANTLYKSGTVWTDLVSDAQR 780
Query: 857 RQCFFNADEERNLAKARLEVSKELVEI 883
R+C NA + L K L V EL E+
Sbjct: 781 RKCISNATTDPELCKLILHVKNELDEL 807
Score = 107 bits (268), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 132/529 (24%), Positives = 228/529 (43%), Gaps = 51/529 (9%)
Query: 1059 DFHLHSNASTYHWEDELVLNLTTYSDDRICKSQVSIETFVYFWNCWKDKIVKIFEYLGCL 1118
D L S S Y+ E E V + Y + + Q+S+ET WN WK +VK+ +L
Sbjct: 1857 DVLLESQTSRYNLELEPVSDQLCY--NMMACDQMSLETLSCIWNQWKLILVKVLAHLNPS 1914
Query: 1119 RVQQDVDGYRSYEDFCLSYFSVWKHCSNLDTTYLLLKSDAYWVRELSNMYVQKRGQLVSI 1178
+ D ED C F + K + D Y++L D+ W+ +++ G +
Sbjct: 1915 EDIKSNDSAAVCEDLCAKLFGLRK---DSDNRYVVLNVDSGWLTNTGRSSLEQDGNRCWL 1971
Query: 1179 DLHQLVSAAQSYWSTELLSVGINVLDKLEALHEQSIKNSLSVLCQSKCLSYIYDVAKFLL 1238
S A+++ EL SVG++VL KLE++ E S + + S Q + + +Y++A FL
Sbjct: 1972 HTVHCQSCARTFMVNELSSVGLSVLRKLESIIETSREIASSPYAQWRSIVILYEIAMFL- 2030
Query: 1239 DSEFLYRHWDDVKTLQKFVELSTEDFFRCIFPLDWRESLSKDMISLRQTEVCRSILEEIV 1298
EF +L+K V + FF +F W + ++ + + ++ + V
Sbjct: 2031 -KEFCL-----ANSLRKTVNFCEQKFFELLFRA-WGDETAECFSDILDSSPAYGLIVDSV 2083
Query: 1299 SGYVTSKSK-LSYGQIGRIAVMILGSGKLHNGLYRKVVERCVKDSPWQAFLKCLSQKMES 1357
Y + ++ L++G +GRIA+ +L + K + L + + +D+ W F + L +++
Sbjct: 2084 GSYTMAGNQNLTHGHLGRIAMFLLYTAKYGDMLNLTLEQYLNRDAEWAQFFQSLKSFLDT 2143
Query: 1358 EYLQHPSESNNERELYVIQKLHGALLDTYGANWRKEYDYMSPAYFLYLLERL-LILISCF 1416
++Q AL T W E DYMSP ++ L+E L +SCF
Sbjct: 2144 ----------GVGRCSLVQTFKVALEFTTNVKWWIEKDYMSPICYMNLMECLGFFAMSCF 2193
Query: 1417 --QGYIFTTKSSFVDWRIYQEPHTNPTASFVTDVWQS-FGDV---LDSIFF--------I 1462
G TKS V + + +F+ + S GD LD + F
Sbjct: 2194 MVNGCALCTKSLLV-----KMLKCRTSKAFLGNCLVSGLGDQDMDLDCMTFSPGVFICQS 2248
Query: 1463 VQHFLYNEKEMIEWISKSHKNVNNYHSLVVLRLVVIICLLHLNFGKFGS-SLRDLLGRKY 1521
++ L N+ + EWI + + + V+LRLV+++ LL L + D L +
Sbjct: 2249 IRSILTNKHAIQEWIREIAPAIR--YVPVLLRLVIMLYLLTLTLQLGDCYEVTDFLAKHR 2306
Query: 1522 VSRLLPLEFCDAL---RKIENHNCLNVHEI-SQAFKKIGNPLVIASLGK 1566
+ LP +F + K N + + A IG+ +VI L K
Sbjct: 2307 IFEDLPPDFSKKIVPTLKFRNGTVAHFTRVFGDALAAIGDTMVILGLPK 2355
Score = 45.1 bits (105), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 904 FVKAFRSINLIHKVLNSLGRFDELLMLENGSGNFMEAANMAVLEGDIFLAT 954
+VKAF +++ I L+S DELL +E GNF+EAA +A +GD+ L +
Sbjct: 1812 YVKAFNNVDHIRAFLSSRNLLDELLSIEMEMGNFLEAAGIAQRKGDVLLES 1862
>gi|224108478|ref|XP_002333388.1| predicted protein [Populus trichocarpa]
gi|222836389|gb|EEE74796.1| predicted protein [Populus trichocarpa]
Length = 1087
Score = 601 bits (1549), Expect = e-168, Method: Compositional matrix adjust.
Identities = 369/886 (41%), Positives = 524/886 (59%), Gaps = 68/886 (7%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
VFSWS+ED+ ++ +KDQVE+IP SF S Y +F+ PL ET L S E++ AP
Sbjct: 22 VFSWSIEDVLNKDLYKDQVEEIPNSFMSTAHYMKAFITPLHVETHADLLSSTESLAGAPT 81
Query: 91 AQVIAFEELKPYGTNQ---YGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDL 147
+++ + K Y + Y I ++ R G P+ GD++ L + K + + DL
Sbjct: 82 YRILRVRKSKDYKPPKDLFYEISMEETRG-----GYVPW---VGDLIALTNVKLKCIDDL 133
Query: 148 RRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDK---TKKSFFFIYLTNILPN 204
R+ +++ V V K+ NR ++ + D+ + F ++L N++ N
Sbjct: 134 RKTQQSYHVAFVHAV-------KRGNRLTPSILSSKPIVDEEGLKNGTLFAVHLINLMTN 186
Query: 205 KRIWNSLHM---CGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSF--SSTLNE 259
RIW SLH+ N VI +VL + D C +CS ++K SS LN
Sbjct: 187 LRIWRSLHLELEGRNMNVIEKVLQNNFNDDGDCTICSSRKKSDAASACIRDTLQSSNLNS 246
Query: 260 SQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAI 319
SQ A+L+C+ C H+ V+L+ GPPGTGKTKT S LL LLR+KCRTL C PTN+A+
Sbjct: 247 SQEAAVLSCIHTARCWHQYTVKLVQGPPGTGKTKTASCLLHALLRMKCRTLTCAPTNIAV 306
Query: 320 TELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEE---IYLNYRIKK 376
E+A+RV+ V + + ++ +GDI+LFGN +R+K + + ++L++R
Sbjct: 307 VEVAARVVSTVADLVEYETYG------MGDIILFGNWERMKFDGDQNDLLHVFLDHRADI 360
Query: 377 LRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSK 436
L +CF P +GW+ +S+I LLED +QYH+Y++ +E + E+ K + S
Sbjct: 361 LEKCFDPSTGWKRILASLISLLEDSEAQYHLYLQDNMGKEGL---LTCEQFVWKRFDFSG 417
Query: 437 GERK---------------PFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEM 481
+ K ++V +RF + L+ CI THLP + IS + M
Sbjct: 418 KQLKFCIVNLYTHLPTTLISLQQFVWKRFDFSGKQLKFCIVNLYTHLPTTLISLQVMRIM 477
Query: 482 VALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRY-LLQLHQRRSECLSV 540
L+ S LL + + L+++ + DE RK + ++L + ECL+
Sbjct: 478 TRALDLMTSLETLLLSLSAADEGLKQILGENEDEE------RKLHNRIKLINEKRECLNT 531
Query: 541 LRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAA 600
LR L SL + +P K +E FC A L F T SSS +LHS+ + PL LVIDEAA
Sbjct: 532 LRLL--SL-KFQVPEFADKNAIEKFCLSNACLIFCTVSSSARLHSIRMAPLRCLVIDEAA 588
Query: 601 QLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLL 660
QLKE ESTIPLQL G++HA+LIGDE QLPA+V S+IS +AGFGRSLFERL L HLL
Sbjct: 589 QLKECESTIPLQLFGLHHAILIGDERQLPAIVNSEISGKAGFGRSLFERLVKLGCKSHLL 648
Query: 661 NIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFI 720
NIQYRMHPSISLFPN +FY +Q+LD NVK Y +++L G F +YSFIN+ G+E+F+
Sbjct: 649 NIQYRMHPSISLFPNTEFYGSQVLDAPNVKETGYRRRFLQGDMFESYSFINLAHGKEEFV 708
Query: 721 -YHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG-FEYENKD 778
S +N VE +A I+ +L+K G+ QKVSIG++SPY AQV AI++KIG F ++
Sbjct: 709 EQRSFKNTVEAAAAADIVGRLFKDINGTGQKVSIGIISPYQAQVHAIQEKIGKFISDSDS 768
Query: 779 GFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSER 838
F+V V ++DGFQGGEED+IIISTVR N GS+GF+S PQR NVALTRAR CLWILG+E
Sbjct: 769 AFSVSVGTVDGFQGGEEDLIIISTVRSNENGSVGFVSNPQRANVALTRARFCLWILGNEA 828
Query: 839 TLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIG 884
TL+ S SIW +V DAK RQCF+NA+E+ +L +A +++ L+E G
Sbjct: 829 TLVRSGSIWKKIVNDAKHRQCFYNAEEDESLDQA---ITESLIEHG 871
>gi|334183665|ref|NP_001185324.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
gi|332196305|gb|AEE34426.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
Length = 1016
Score = 593 bits (1529), Expect = e-166, Method: Compositional matrix adjust.
Identities = 370/925 (40%), Positives = 517/925 (55%), Gaps = 117/925 (12%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
VFSWSL D+ + + ++ QV KIP +F S K+YF SFV P++EET L S + +RRA
Sbjct: 26 VFSWSLRDVLNSNLYRGQVGKIPNTFTSTKEYFESFVKPIIEETHADLLSSMGTIRRA-- 83
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPG-------DILVLADFKPEK 143
Q F E+KP G + Y+ T+ + + Y T G D++ + D +P +
Sbjct: 84 -QAFKFWEIKP-GKDFKPPRDLYYEVTLQMTNE--YMTKGGQNLLEVNDLIAVTDKRPIR 139
Query: 144 VSDLRRVGRTWTFVSVTTVPDDEDENKKE-------------NRYKVKARNNMQVHDKTK 190
+ DLR + V V +EN + +K + ++
Sbjct: 140 IDDLRFSHEPYLLALVCGV----NENNPHLITILASKPIIFDDDDDIKTSSKRGKGERKS 195
Query: 191 KSFFFIYLTNILPNKRIWNSLHM---CGNWKVITQVLGTDSVVDE----RCELCSVQRKG 243
SFF + L N++ N RIW +LH GN K+I++VL +++ VD C+ S
Sbjct: 196 LSFFGVNLINMMTNIRIWTALHPNPEGGNLKLISRVLQSNNEVDGGSCVSCKENSESVVS 255
Query: 244 QWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL 303
+ + SF LN SQ A+L CL C H + ++LIWGPPGTGKTKT S+LLL L
Sbjct: 256 DYSARMLRSFK--LNSSQEDAILRCLEAKSCNHSNNIKLIWGPPGTGKTKTTSVLLLNFL 313
Query: 304 RIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNP 363
+++CRTL C PTN+A+ E+ SR++KLV ES + D LGDI+LFGNK+R+K++
Sbjct: 314 KMRCRTLTCAPTNIAVLEVCSRLVKLVSESLRFDGYG------LGDIVLFGNKERMKIDD 367
Query: 364 GFE--EIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVN 421
+ +++L YR+ +L CF L+GWR + MI LL D ++ R+ +VN
Sbjct: 368 REDLFDVFLEYRVDELYRCFMALTGWRANVNRMICLLSDPKHEF---------RQFKSVN 418
Query: 422 QSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYIS------- 474
+ F +V ER L + C HLP S +S
Sbjct: 419 TT---------------LLSFKDFVEERLSRLRYDLHHQFTTLCLHLPTSLLSFRVAEKM 463
Query: 475 ---ENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLH 531
N + + A + D +G + ++ + DE S
Sbjct: 464 NQTNNLLRNIAASDVMRDGYGRMKYK-----------LKDTGDENDS------------- 499
Query: 532 QRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPL 591
R +CL +L ++ S+ LP SK L+ C A L F TASSS +LH P+
Sbjct: 500 -RTQDCLEMLTSISMSI---KLPDFISKFELQKLCLDNAYLLFCTASSSARLHMSS--PI 553
Query: 592 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT 651
LVIDEAAQLKE ES IPLQL G+ HA+LIGDE QLPAM++S I+ EA GRSLFERL
Sbjct: 554 QLLVIDEAAQLKECESAIPLQLRGLQHAILIGDEKQLPAMIKSNIASEADLGRSLFERLV 613
Query: 652 SLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
L H+K LLN+QYRMHPSIS+FPN +FY +ILD +V+ +SYEK++L +G YSFIN
Sbjct: 614 LLGHNKQLLNMQYRMHPSISIFPNREFYDMKILDAPSVRLRSYEKKFLPEKMYGPYSFIN 673
Query: 712 IIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
I GRE F +S +N+VEVS V +I+ KLY + + +S+GV+SPY AQV AI+++I
Sbjct: 674 IAYGREQFGEGYSSKNLVEVSVVAEIVSKLYSVSRKTGRTISVGVISPYKAQVFAIQERI 733
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
G +Y + FTV V+S+DGFQGGEEDIIIISTVR N G+IGF+S QR NVALTRAR+C
Sbjct: 734 GEKYNTEGTFTVSVRSVDGFQGGEEDIIIISTVRSNGNGAIGFLSNQQRTNVALTRARYC 793
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK----ELVEIGAE 886
LWILG+E TL ++ S+W LV DAKAR CF NA+E+ +LA+ +E S +L ++ +
Sbjct: 794 LWILGNEATLTNNRSVWRQLVDDAKARNCFHNAEEDESLAQC-IERSTTALDDLNKLQNK 852
Query: 887 SLTSTSQGGKKEEFEFEFVKAFRSI 911
L S K +EF+K+ +I
Sbjct: 853 KLISFENSIWKVWLSYEFLKSLETI 877
>gi|15218807|ref|NP_176757.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
gi|332196304|gb|AEE34425.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
Length = 1050
Score = 593 bits (1529), Expect = e-166, Method: Compositional matrix adjust.
Identities = 370/925 (40%), Positives = 517/925 (55%), Gaps = 117/925 (12%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
VFSWSL D+ + + ++ QV KIP +F S K+YF SFV P++EET L S + +RRA
Sbjct: 26 VFSWSLRDVLNSNLYRGQVGKIPNTFTSTKEYFESFVKPIIEETHADLLSSMGTIRRA-- 83
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPG-------DILVLADFKPEK 143
Q F E+KP G + Y+ T+ + + Y T G D++ + D +P +
Sbjct: 84 -QAFKFWEIKP-GKDFKPPRDLYYEVTLQMTNE--YMTKGGQNLLEVNDLIAVTDKRPIR 139
Query: 144 VSDLRRVGRTWTFVSVTTVPDDEDENKKE-------------NRYKVKARNNMQVHDKTK 190
+ DLR + V V +EN + +K + ++
Sbjct: 140 IDDLRFSHEPYLLALVCGV----NENNPHLITILASKPIIFDDDDDIKTSSKRGKGERKS 195
Query: 191 KSFFFIYLTNILPNKRIWNSLHM---CGNWKVITQVLGTDSVVDE----RCELCSVQRKG 243
SFF + L N++ N RIW +LH GN K+I++VL +++ VD C+ S
Sbjct: 196 LSFFGVNLINMMTNIRIWTALHPNPEGGNLKLISRVLQSNNEVDGGSCVSCKENSESVVS 255
Query: 244 QWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL 303
+ + SF LN SQ A+L CL C H + ++LIWGPPGTGKTKT S+LLL L
Sbjct: 256 DYSARMLRSFK--LNSSQEDAILRCLEAKSCNHSNNIKLIWGPPGTGKTKTTSVLLLNFL 313
Query: 304 RIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNP 363
+++CRTL C PTN+A+ E+ SR++KLV ES + D LGDI+LFGNK+R+K++
Sbjct: 314 KMRCRTLTCAPTNIAVLEVCSRLVKLVSESLRFDGYG------LGDIVLFGNKERMKIDD 367
Query: 364 GFE--EIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVN 421
+ +++L YR+ +L CF L+GWR + MI LL D ++ R+ +VN
Sbjct: 368 REDLFDVFLEYRVDELYRCFMALTGWRANVNRMICLLSDPKHEF---------RQFKSVN 418
Query: 422 QSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYIS------- 474
+ F +V ER L + C HLP S +S
Sbjct: 419 TT---------------LLSFKDFVEERLSRLRYDLHHQFTTLCLHLPTSLLSFRVAEKM 463
Query: 475 ---ENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLH 531
N + + A + D +G + ++ + DE S
Sbjct: 464 NQTNNLLRNIAASDVMRDGYGRMKYK-----------LKDTGDENDS------------- 499
Query: 532 QRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPL 591
R +CL +L ++ S+ LP SK L+ C A L F TASSS +LH P+
Sbjct: 500 -RTQDCLEMLTSISMSI---KLPDFISKFELQKLCLDNAYLLFCTASSSARLHMSS--PI 553
Query: 592 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT 651
LVIDEAAQLKE ES IPLQL G+ HA+LIGDE QLPAM++S I+ EA GRSLFERL
Sbjct: 554 QLLVIDEAAQLKECESAIPLQLRGLQHAILIGDEKQLPAMIKSNIASEADLGRSLFERLV 613
Query: 652 SLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
L H+K LLN+QYRMHPSIS+FPN +FY +ILD +V+ +SYEK++L +G YSFIN
Sbjct: 614 LLGHNKQLLNMQYRMHPSISIFPNREFYDMKILDAPSVRLRSYEKKFLPEKMYGPYSFIN 673
Query: 712 IIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
I GRE F +S +N+VEVS V +I+ KLY + + +S+GV+SPY AQV AI+++I
Sbjct: 674 IAYGREQFGEGYSSKNLVEVSVVAEIVSKLYSVSRKTGRTISVGVISPYKAQVFAIQERI 733
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
G +Y + FTV V+S+DGFQGGEEDIIIISTVR N G+IGF+S QR NVALTRAR+C
Sbjct: 734 GEKYNTEGTFTVSVRSVDGFQGGEEDIIIISTVRSNGNGAIGFLSNQQRTNVALTRARYC 793
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK----ELVEIGAE 886
LWILG+E TL ++ S+W LV DAKAR CF NA+E+ +LA+ +E S +L ++ +
Sbjct: 794 LWILGNEATLTNNRSVWRQLVDDAKARNCFHNAEEDESLAQC-IERSTTALDDLNKLQNK 852
Query: 887 SLTSTSQGGKKEEFEFEFVKAFRSI 911
L S K +EF+K+ +I
Sbjct: 853 KLISFENSIWKVWLSYEFLKSLETI 877
>gi|449445397|ref|XP_004140459.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Cucumis
sativus]
Length = 770
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 346/791 (43%), Positives = 484/791 (61%), Gaps = 87/791 (10%)
Query: 115 RNTISNSGKEPYKTLPGDILVLADFKPEKVSD--LRRVGR-TWTFVSVTTVPDDEDENKK 171
+N G++PYK+LPGD V+ D P+ ++ L + + W F + V D N
Sbjct: 35 QNIYKPKGQQPYKSLPGDFFVILDVDPQTITSDYLEKSSKLNWAFAWLGQVND----NNT 90
Query: 172 ENRYKVKARNNMQVHDKTKKS-FFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSVV 230
K+ N+M D+ K + F ++L N+ N RIW +L + ++ VLGT S+
Sbjct: 91 PTHLKLHISNSM---DQLKSTPLFIVFLMNLTTNLRIWKTLQCSSSGGIVKHVLGTMSMD 147
Query: 231 DERCELCSVQRKGQWDEKFGPSF---SSTLNESQVGAMLACLRRLDCGHRSGVELIWGPP 287
++ C+ C+ Q G+ + + S +LNESQ A+ +C+R++ C H+ +ELIWGPP
Sbjct: 148 NKTCKQCNNQTDGEDSTEDMATLRLASLSLNESQRVAIESCIRKVKCQHKPSIELIWGPP 207
Query: 288 GTGKTKTVSMLLLTLLRI--KCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPI- 344
GTGKTKT S+LL +L I + RTLAC PTNVAIT LAS+VLKL+K DS S I
Sbjct: 208 GTGKTKTTSILLWKILAINHQIRTLACAPTNVAITNLASQVLKLLK----HDSLSRNAIF 263
Query: 345 CPLGDILLFGNKDRLKVNPG--FEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCV 402
CPLG++LLFGNKDRLK + E+IYL+ R++KL +C G + SSMI + +
Sbjct: 264 CPLGELLLFGNKDRLKFDYSHQLEDIYLDRRVEKLFKCLGQY-GLKFQISSMIGIFQ--- 319
Query: 403 SQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIF 462
E K L ++ FK V SL C+
Sbjct: 320 -----------------------------------ENK--LSKLKRMFKSNVSSLLECVH 342
Query: 463 IFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFV 522
IF TH+P+ I E++++++ L + G LL ++N +++ D+ + A +
Sbjct: 343 IFTTHIPQQVIMEHNWKKLEILVGFICDIGTLLSKNN---------YNYDDDDTMGEALI 393
Query: 523 RKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYK 582
L+ H L VLR L SLDE+ +P SK +E FCF++ASL FST S+S+K
Sbjct: 394 D----LKCH-----FLLVLRTLLVSLDEIEVPSKLSKNSIEKFCFQKASLIFSTTSNSFK 444
Query: 583 LHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGF 642
L+SV+ LN +V+DEAAQLKE ES IPLQL I+HA+L+GDE QLPA V+SK+ + A F
Sbjct: 445 LNSVKKNSLNLVVVDEAAQLKECESLIPLQLPHISHAILVGDEFQLPATVKSKVCERAKF 504
Query: 643 GRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGT 702
GRSL+ERL+ + +SKHLL+ QYRMHP +S FPN +FY N+I+D + V +K YEK+YL
Sbjct: 505 GRSLYERLSLIGYSKHLLDTQYRMHPLVSYFPNSKFYGNKIMDASIVMNKEYEKEYLPSP 564
Query: 703 EFGTYSFINIIGGREDF--IYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYT 760
FG YSFIN+ GG E+ S +N+VEV+ V +I+Q LYKAW +K+ +SIG++SPY
Sbjct: 565 LFGPYSFINVCGGEEESNGDGQSKKNMVEVTVVTQIIQMLYKAWCKNKKDISIGIISPYN 624
Query: 761 AQVVAIRKKIGFEYE--NKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQ 818
AQV +I++K+G +YE N +GF VKVKSIDGFQGGEED+IIISTVR N G +IGF+S Q
Sbjct: 625 AQVSSIQEKLGRKYEKKNNEGFGVKVKSIDGFQGGEEDVIIISTVRSNNGHNIGFLSNKQ 684
Query: 819 RVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLA-KARLEVS 877
R NVALTRAR CLWI+G +TL S S W ++ DAK R+CFFN +E + LA + R+ +
Sbjct: 685 RTNVALTRARFCLWIVGDAKTLGKSNSEWRDVIDDAKTRRCFFNVEENKELANEMRMMKT 744
Query: 878 KELVEIGAESL 888
++ +I E L
Sbjct: 745 WQMSDIKQEIL 755
>gi|218195491|gb|EEC77918.1| hypothetical protein OsI_17248 [Oryza sativa Indica Group]
gi|222629476|gb|EEE61608.1| hypothetical protein OsJ_16025 [Oryza sativa Japonica Group]
Length = 2693
Score = 587 bits (1514), Expect = e-164, Method: Compositional matrix adjust.
Identities = 334/867 (38%), Positives = 486/867 (56%), Gaps = 83/867 (9%)
Query: 28 GHTVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRR 87
G V SWSL ++ ++ +VE+IP SF S+ YF ++ PL+EETR L S LE +
Sbjct: 7 GDIVLSWSLGEVMDDDLYRGKVEEIPRSFMSLDHYFKTYAAPLIEETRSDLCSCLELISE 66
Query: 88 APYAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDL 147
AP +++++ EE G Y ++VD+W N S E Y GDI +L+ KPE DL
Sbjct: 67 APISKILSMEEAGKSGL--YFMDVDFWDNGAGFSS-EAYTARNGDIFILSSMKPESADDL 123
Query: 148 RRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRI 207
R G T+ VT V D++ K ++VK ++ + + + I+L NI+ N RI
Sbjct: 124 NRYGVTYCLAMVTEVSMDDEFQKG---FRVKVAKDVTLQEGFNRLRHAIFLNNIMTNLRI 180
Query: 208 WNS----LHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVG 263
W + + M N+ VI + + D+ C++C Q + S LN+SQV
Sbjct: 181 WKAICFDMGMNNNFTVIKSLFAPTYMGDDVCDICVKQDEHCLALCTEQLLSINLNQSQVD 240
Query: 264 AMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELA 323
A+ + + + C H + ++LIWGPPGTGKTKTVS LL L +KCRTL C PTNVAI +
Sbjct: 241 AIESVISAVQCRHLNLMKLIWGPPGTGKTKTVSALLWALACLKCRTLTCAPTNVAIVGVC 300
Query: 324 SRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFAP 383
+R L ++++ + +++ N LGD+LLFGNK + + ++++L+ R +L ECF+
Sbjct: 301 TRFLHILRD-FNKNANENFLPFSLGDVLLFGNKYNMDITEDLQDVFLDCRADELVECFSS 359
Query: 384 LSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKP-- 441
LSGWR+ +SM EDC SQY + +E G P
Sbjct: 360 LSGWRYRIASMASFFEDCGSQYDMLLE------------------------DDGRSDPIC 395
Query: 442 FLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVV 501
FL +++ +F +L+ CI HLP+ S +S + L L+ LL +N+
Sbjct: 396 FLDFIKTQFDVTATALKKCIMNLLIHLPRKCFSHDSISNISMLFDSLEKVEALLHHENLT 455
Query: 502 SKELEKLFSHSVDEGISWA---FVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTS 558
++ F + IS A F+ ++ +L++ + CL +L +L SLD LP
Sbjct: 456 DDGAKRGFGFLSIQDISCAKSAFIIEK---ELNRAKLSCLQLLEDLERSLD---LPTGRD 509
Query: 559 KLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINH 618
+ ++++C + A+L F T+SSSY+LH +EI PL+ L++DEAAQ
Sbjct: 510 RNWIQNYCMRNATLIFCTSSSSYRLHHMEIAPLDVLIVDEAAQ----------------- 552
Query: 619 AVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQF 678
+ EAGFG SLFERL L+ KHLLNIQYRM P ISLFPN+QF
Sbjct: 553 -----------------VCKEAGFGISLFERLVVLDFEKHLLNIQYRMDPRISLFPNVQF 595
Query: 679 YRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRED--FIYHSCRNIVEVSAVIKI 736
Y +ILDG NV S Y K Y T FGTY+FINI GRE+ +S RN+VEV+ V+ +
Sbjct: 596 YGRKILDGPNVMSSVYNKDY-TNLPFGTYAFINISDGREEKEGTGNSWRNLVEVAVVLHL 654
Query: 737 LQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEED 796
+Q ++K W Q +SIGV+SPY++QV +I ++G Y+ DGF V+VKS+DGFQG E+D
Sbjct: 655 IQTIFKTWKRKGQMLSIGVISPYSSQVDSIESRLGKLYDTCDGFHVRVKSVDGFQGEEDD 714
Query: 797 IIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKA 856
III+STVR N G +GF++ QR NVALTRARHCLWILG+ TL SS ++W L+ DA+
Sbjct: 715 IIILSTVRSNVKGIVGFLADEQRTNVALTRARHCLWILGNANTLYSSGTVWKDLIADAQR 774
Query: 857 RQCFFNADEERNLAKARLEVSKELVEI 883
R+C +A + + K L+V EL E+
Sbjct: 775 RKCIIDATNDAAICKLVLKVKNELDEL 801
Score = 298 bits (763), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 247/874 (28%), Positives = 417/874 (47%), Gaps = 82/874 (9%)
Query: 904 FVKAFRSINLIHKVLNSLGRFDELLMLENGSGNFMEAANMAVLEGDIFLATDLLQKAWNF 963
FVK+F S++ I LNS DELL +E GNF+EAA +A G+I L DLL+KA
Sbjct: 1804 FVKSFSSMDHIRVFLNSKNLVDELLSVEMDMGNFVEAAGIAKHTGNILLEADLLEKAGFL 1863
Query: 964 REASKLVLNFVFSNSLWSPGSRGWPLKQFTQKEELLQKAKSLAKNDSNQFYEFVCAEANI 1023
A++L+L +F NSLW+ S GWP K+F +KE+LL KAK +++N S FY VC+EA+
Sbjct: 1864 ENATQLILLQLFVNSLWASHSTGWPPKRFAEKEQLLAKAKEMSRNVSESFYCLVCSEADA 1923
Query: 1024 LSNDHSNLVMMNQQFIDSKRHQNIRGEILSSRMILDFHLHSNASTYHWEDELVLNLTTYS 1083
LS++H +L + I+ + N+ E+++SR+ILD HL + AS Y +E E + +
Sbjct: 1924 LSDEHKSLASITYNLIEGNKCGNLLVELIASRLILDVHLQAEASGYCFESEPGSHDGRHC 1983
Query: 1084 DDRICKSQVSIETFVYFWNCWKDKIVKIFEYLGCLRVQQDVDGYRSYEDFCLSYFSVWKH 1143
D + +Q+S+ET VY WN W IVK+ +L + + D ED C YF W+
Sbjct: 1984 KDMLVLNQISLETLVYDWNYWSSIIVKVLRHLDHPKDAESNDLAAICEDLCAKYFG-WRK 2042
Query: 1144 CSNLDTTYLLLKSDAYWVRELSNMYVQKRGQLVSIDLHQLVSAAQSYWSTELLSVGINVL 1203
+ D Y++L +D+ W+ Y+Q+ G+ +D S A+ +W EL SVG++VL
Sbjct: 2043 DGDYD-RYVVLNTDSSWLSNTGRNYLQQDGRRCWLDTLHCHSCAKDFWINELYSVGLSVL 2101
Query: 1204 DKLEALHEQSIKNSLSVLCQSKCLSYIYDVAKFLLDSEFLYRHWDDVKTLQKFVELSTED 1263
KLE++ + +S S+ + + IY++AKFL +SEF T++ + L
Sbjct: 2102 KKLESIVQILPTSSCSL---GRTILVIYEIAKFLKESEFGMPK----NTIKYYSILCERR 2154
Query: 1264 FFRCIFPLDWRESLSKDMISLRQTEVCRSILEEIVSGYVTSK-SKLSYGQIGRIAVMILG 1322
FF +F L WR+ K ++ + + ++L + + Y+ S+ +K+++ Q+GRI +++L
Sbjct: 2155 FFELVF-LVWRDETPKSLLCILDSATTYNLLSDSICSYLGSRNNKMTHSQVGRITMLLLH 2213
Query: 1323 SGKLHNGLYRKVVERCVKDSPWQAFLKCLSQKMESEYLQHPSESNNERELYVIQKLHGAL 1382
+ +L + L ++VE + S W F L + ++ N ++ AL
Sbjct: 2214 AARLDDSLISQLVEYLDRGSEWATFFLSLKKYLD----------NGVSRDILLLDFKFAL 2263
Query: 1383 LDTYGANWRKEYDYMSPAYFLYLLERLLILIS---CFQGYIFTTKSSFVD---------- 1429
TY ANWR E+ Y+SP ++ L+E L L + Y+F TKS
Sbjct: 2264 DCTYKANWRAEH-YISPICYVDLIECLGFLATTHLVLNDYMFCTKSLLAKMMKCRTTKGY 2322
Query: 1430 WRIYQEPHTNPTASFVTDVWQSFGDVLDSIFFIVQHFLYNEKEMIEWISKSHKNVNNYHS 1489
+ P T+ + + F I+ V+ L +++ ++EW+ + ++Y
Sbjct: 2323 FETCMAPSTDIDLGYAGHSARCF------IYLSVKDLLGSKRMIVEWVQNTSTPTSSYVP 2376
Query: 1490 LVVLRLVVIICLLHLNFGKFG-SSLRDLLGRKYVSRLLPLEFCDALR---KIENHNCLNV 1545
++LRLV+ + L+ +N + L + +V LP EF + +R ++++ N
Sbjct: 2377 -ILLRLVITLYLVTVNQDDGDLYEVTAFLEKNHVFTDLPPEFSEKIRNALRMKSRTVKNF 2435
Query: 1546 HEI-SQAFKKIGNPLVIASLGKNCSQFLC-PDAIFVNMKVMKSTDEIFGILYPKMEACQV 1603
+ + A IG +V+ K C PD +N ++ S D +
Sbjct: 2436 MRVFADALAAIGTRMVVMGDIKKAMAHKCQPD---LNADMISSVD------LSDAKKVMA 2486
Query: 1604 QVGTSKDVPSKRPASLPEDTDAQNMNDNTLVMNLDQLCKVFEALKMVDNGNNGNYRRSV- 1662
+ T K K+ LPE N N + L V + K N N + +
Sbjct: 2487 LLSTEKSSSLKQEPQLPEIKSVCNKICNATSGHF-PLTSVGGSQKSTSNFNLSDVDHPLL 2545
Query: 1663 ----KYQVGTSKDVPSKRPASLPED------TDAQNKNDNTMVMNLDQLCKALE------ 1706
+QV ++P K+ SL + + + ++ L +CK +E
Sbjct: 2546 EKFEAFQV----NMPQKKNGSLISQILRSPLSWIEQRAPPVQMLELRHICKQVEEQHVRE 2601
Query: 1707 --ALKMLDYGNNGNHGNSVKYQVGTSKDVPSKRS 1738
AL + D +N HG+ K +G DV +S
Sbjct: 2602 KRALSVKDLHSNREHGDGEK-NIGKIVDVQGSQS 2634
>gi|414886670|tpg|DAA62684.1| TPA: hypothetical protein ZEAMMB73_454199 [Zea mays]
Length = 925
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 366/936 (39%), Positives = 525/936 (56%), Gaps = 102/936 (10%)
Query: 1 MKQESQSEEMMEGKGCSSSSKKAVGFAGHT---------VFSWSLEDIFSQSFFKDQVEK 51
++QES ++ K S+ K+A G T VFSW L+D+ ++ +V+K
Sbjct: 14 VRQESSDGRVLRAK--STRGKEASGSRYGTWDQSELERHVFSWRLQDVLDRNLLNKKVKK 71
Query: 52 IPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPYAQVIAFEELKPYGTNQYGIEV 111
+P++F S+ Y SF+ PL+EETR L S LE +R AP A+V +L E
Sbjct: 72 VPKTFNSLDGYLQSFILPLIEETRADLCSALEGIRHAPAAEVTRMVQLDE--------EQ 123
Query: 112 DYWRNTISNSGK-------EPYKTLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPD 164
D +R + N+ + Y D+LVL D +P S+L G+ + SV
Sbjct: 124 DIFRIGVKNADDPKLAQRDQAYVPKDADLLVLTDRRPRHSSELGLTGKPYLLCSVL---- 179
Query: 165 DEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWNSLHM----CGNWKVI 220
K ++ R + + F ++L N+ RI N+L C N +I
Sbjct: 180 -----KAQSGDGTVVRLSRSLGPAEGLPLFAVFLVNMTTYNRILNALDARAAACRNTSLI 234
Query: 221 TQVL----GTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGH 276
+ L G D V S+ D K LN+SQ+ A+ C+ + H
Sbjct: 235 EKTLDPKFGRDYNVSSSETPSSL-----LDRKLDGLKDFELNDSQLYAVHDCVSAV---H 286
Query: 277 RSG--VELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESY 334
+ V LIWGPPGTGKTKT+S LL ++L RT+ C PTN A+ E+ASRVL +++ES
Sbjct: 287 QPACSVRLIWGPPGTGKTKTISALLWSMLIENHRTVTCAPTNTAVAEVASRVLGVIEES- 345
Query: 335 KRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFAPLSGWRHCFSSM 394
S C LGD++LFGN+DR+ V+ E+I++ R+ +LR+C P +GW + SSM
Sbjct: 346 --GSGCAATKCFLGDVVLFGNEDRMAVDRKLEKIFIGSRVCRLRQCMMPSTGWTNSLSSM 403
Query: 395 IDLLEDCVSQY------------HIYVEKLKERED---CNVNQSEEK----------ECR 429
I LLED + Y H E++K R + C++ ++K E +
Sbjct: 404 IVLLEDPMVPYERYDEAIQGCLLHFVSEEIKLRNEIAVCSLRTMDDKKVKEMQKDLLEVQ 463
Query: 430 KETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLD 489
K+ + E+ + Y + +K LR C+ F LP+S SE +F M + LLD
Sbjct: 464 KKVRLVEREKMSYETYFQSNYKKLAKDLRTCVETFVDDLPRSATSEENFCCMAEMPLLLD 523
Query: 490 SFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLD 549
+FG L+ + ++L+ LF D +S+ +L RS CL LR L ++ +
Sbjct: 524 AFGVLVQSEPF--EQLQALFKRDTD--VSF---------RLKDARSSCLCKLRLLSSNFE 570
Query: 550 ELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVE-IKPLNFLVIDEAAQLKESEST 608
LP +E+F + A + TASSSY+LH ++ +PL LV+DEAAQLKE ES
Sbjct: 571 ---LPEMYDSRTIEEFLLQNAKIVLCTASSSYRLHYMQKAQPLEVLVVDEAAQLKECESL 627
Query: 609 IPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHP 668
IPLQL G+ HAVLIGDE QLPA+V+SK+ ++AGFGRSLFERLTSL KHLL++QYRMHP
Sbjct: 628 IPLQLPGVRHAVLIGDEYQLPALVKSKVCEDAGFGRSLFERLTSLEQPKHLLDVQYRMHP 687
Query: 669 SISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYH--SCRN 726
IS FP FY +I DG NV +++YE+++L G +G+YSFINI GG E S N
Sbjct: 688 WISKFPVSSFYGGRITDGPNVLNRNYERRHLAGPMYGSYSFINIDGGSEATGKQDRSLIN 747
Query: 727 IVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFE-YENKDG-FTVKV 784
VE +AV +I+QKL+ V +++ + +GVVSPY QV AI +K+G + Y +G F+VKV
Sbjct: 748 PVEAAAVARIVQKLFIESVDTRKAIRVGVVSPYKGQVRAIEEKLGKQVYSMHNGSFSVKV 807
Query: 785 KSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSE 844
+++DGFQG EED+II STVR NT G IGF++ R NVALTRA+HCLWILG+ +TL S +
Sbjct: 808 RTVDGFQGAEEDVIIFSTVRSNTAGKIGFLADTNRTNVALTRAKHCLWILGNAKTLASGK 867
Query: 845 SIWGALVCDAKARQCFFNADEERNLAKARLEVSKEL 880
+IW +V DAK R CFF+A ++++LA A ++ S EL
Sbjct: 868 TIWRQIVDDAKERGCFFDAKDDQDLASAIIKASIEL 903
>gi|32492200|emb|CAE03468.1| OSJNBa0083N12.5 [Oryza sativa Japonica Group]
Length = 2646
Score = 584 bits (1505), Expect = e-163, Method: Compositional matrix adjust.
Identities = 336/868 (38%), Positives = 486/868 (55%), Gaps = 96/868 (11%)
Query: 28 GHTVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRR 87
G V SWSL ++ ++ +VE+IP SF S+ YF ++ PL+EETR L S LE +
Sbjct: 7 GDIVLSWSLGEVMDDDLYRGKVEEIPRSFMSLDHYFKTYAAPLIEETRSDLCSCLELISE 66
Query: 88 APYAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDL 147
AP +++++ EE G Y ++VD+W N S E Y GDI +L+ KPE DL
Sbjct: 67 APISKILSMEEAGKSGL--YFMDVDFWDNGAGFSS-EAYTARNGDIFILSSMKPESADDL 123
Query: 148 RRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRI 207
R G T+ VT V D++ K ++VK ++ + + + I+L NI+ N RI
Sbjct: 124 NRYGVTYCLAMVTEVSMDDEFQKG---FRVKVAKDVTLQEGFNRLRHAIFLNNIMTNLRI 180
Query: 208 WNS----LHMCGNWKVITQVLGTDSVVDERC-ELCSVQRKGQWDEKFGPSFSSTLNESQV 262
W + + M N+ VI + + +DE C LC+ Q S LN+SQV
Sbjct: 181 WKAICFDMGMNNNFTVIKSLFAP-TYMDEHCLALCTEQL-----------LSINLNQSQV 228
Query: 263 GAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITEL 322
A+ + + + C H + ++LIWGPPGTGKTKTVS LL L +KCRTL C PTNVAI +
Sbjct: 229 DAIESVISAVQCRHLNLMKLIWGPPGTGKTKTVSALLWALACLKCRTLTCAPTNVAIVGV 288
Query: 323 ASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFA 382
+R L ++++ + +++ N LGD+LLFGNK + + ++++L+ R +L ECF+
Sbjct: 289 CTRFLHILRD-FNKNANENFLPFSLGDVLLFGNKYNMDITEDLQDVFLDCRADELVECFS 347
Query: 383 PLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKP- 441
LSGWR+ +SM EDC SQY + +E G P
Sbjct: 348 SLSGWRYRIASMASFFEDCGSQYDMLLE------------------------DDGRSDPI 383
Query: 442 -FLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNV 500
FL +++ +F +L+ CI HLP+ S +S + L L+ LL +N+
Sbjct: 384 CFLDFIKTQFDVTATALKKCIMNLLIHLPRKCFSHDSISNISMLFDSLEKVEALLHHENL 443
Query: 501 VSKELEKLFSHSVDEGISWA---FVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTT 557
++ F + IS A F+ ++ +L++ + CL +L +L SLD LP
Sbjct: 444 TDDGAKRGFGFLSIQDISCAKSAFIIEK---ELNRAKLSCLQLLEDLERSLD---LPTGR 497
Query: 558 SKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGIN 617
+ ++++C + A+L F T+SSSY+LH +EI PL+ L++DEAAQ
Sbjct: 498 DRNWIQNYCMRNATLIFCTSSSSYRLHHMEIAPLDVLIVDEAAQ---------------- 541
Query: 618 HAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQ 677
+ EAGFG SLFERL L+ KHLLNIQYRM P ISLFPN+Q
Sbjct: 542 ------------------VCKEAGFGISLFERLVVLDFEKHLLNIQYRMDPRISLFPNVQ 583
Query: 678 FYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRED--FIYHSCRNIVEVSAVIK 735
FY +ILDG NV S Y K Y T FGTY+FINI GRE+ +S RN+VEV+ V+
Sbjct: 584 FYGRKILDGPNVMSSVYNKDY-TNLPFGTYAFINISDGREEKEGTGNSWRNLVEVAVVLH 642
Query: 736 ILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEE 795
++Q ++K W Q +SIGV+SPY++QV +I ++G Y+ DGF V+VKS+DGFQG E+
Sbjct: 643 LIQTIFKTWKRKGQMLSIGVISPYSSQVDSIESRLGKLYDTCDGFHVRVKSVDGFQGEED 702
Query: 796 DIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAK 855
DIII+STVR N G +GF++ QR NVALTRARHCLWILG+ TL SS ++W L+ DA+
Sbjct: 703 DIIILSTVRSNVKGIVGFLADEQRTNVALTRARHCLWILGNANTLYSSGTVWKDLIADAQ 762
Query: 856 ARQCFFNADEERNLAKARLEVSKELVEI 883
R+C +A + + K L+V EL E+
Sbjct: 763 RRKCIIDATNDAAICKLVLKVKNELDEL 790
Score = 266 bits (681), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 239/874 (27%), Positives = 399/874 (45%), Gaps = 118/874 (13%)
Query: 904 FVKAFRSINLIHKVLNSLGRFDELLMLENGSGNFMEAANMAVLEGDIFLATDLLQKAWNF 963
FVK+F S++ I LNS DELL +E GNF+EAA +A G+I L DLL+KA
Sbjct: 1793 FVKSFSSMDHIRVFLNSKNLVDELLSVEMDMGNFVEAAGIAKHTGNILLEADLLEKAGFL 1852
Query: 964 REASKLVLNFVFSNSLWSPGSRGWPLKQFTQKEELLQKAKSLAKNDSNQFYEFVCAEANI 1023
A++L+L +F NSLW+ S GWP K+F +KE+LL KAK +++N S FY VC+EA+
Sbjct: 1853 ENATQLILLQLFVNSLWASHSTGWPPKRFAEKEQLLAKAKEMSRNVSESFYCLVCSEADA 1912
Query: 1024 LSNDHSNLVMMNQQFIDSKRHQNIRGEILSSRMILDFHLHSNASTYHWEDELVLNLTTYS 1083
LS++H +L + I+ + N+ E+++SR+ILD HL + AS Y +E E + +
Sbjct: 1913 LSDEHKSLASITYNLIEGNKCGNLLVELIASRLILDVHLQAEASGYCFESEPGSHDGRHC 1972
Query: 1084 DDRICKSQVSIETFVYFWNCWKDKIVKIFEYLGCLRVQQDVDGYRSYEDFCLSYFSVWKH 1143
D + +Q+S+ET VY WN W IVK+ +L + + D ED C YF W+
Sbjct: 1973 KDMLVLNQISLETLVYDWNYWSSIIVKVLRHLDHPKDAESNDLAAICEDLCAKYFG-WRK 2031
Query: 1144 CSNLDTTYLLLKSDAYWVRELSNMYVQKRGQLVSIDLHQLVSAAQSYWSTELLSVGINVL 1203
+ D YV +W EL SVG++VL
Sbjct: 2032 DGDYDR------------------YVD-------------------FWINELYSVGLSVL 2054
Query: 1204 DKLEALHEQSIKNSLSVLCQSKCLSYIYDVAKFLLDSEFLYRHWDDVKTLQKFVELSTED 1263
KLE++ + +S S+ + + IY++AKFL +SEF T++ + L
Sbjct: 2055 KKLESIVQILPTSSCSL---GRTILVIYEIAKFLKESEFGMPK----NTIKYYSILCERR 2107
Query: 1264 FFRCIFPLDWRESLSKDMISLRQTEVCRSILEEIVSGYVTSK-SKLSYGQIGRIAVMILG 1322
FF +F L WR+ K ++ + + ++L + + Y+ S+ +K+++ Q+GRI +++L
Sbjct: 2108 FFELVF-LVWRDETPKSLLCILDSATTYNLLSDSICSYLGSRNNKMTHSQVGRITMLLLH 2166
Query: 1323 SGKLHNGLYRKVVERCVKDSPWQAFLKCLSQKMESEYLQHPSESNNERELYVIQKLHGAL 1382
+ +L + L ++VE + S W F L + ++ N ++ AL
Sbjct: 2167 AARLDDSLISQLVEYLDRGSEWATFFLSLKKYLD----------NGVSRDILLLDFKFAL 2216
Query: 1383 LDTYGANWRKEYDYMSPAYFLYLLERLLILIS---CFQGYIFTTKSSFVD---------- 1429
TY ANWR E+ Y+SP ++ L+E L L + Y+F TKS
Sbjct: 2217 DCTYKANWRAEH-YISPICYVDLIECLGFLATTHLVLNDYMFCTKSLLAKMMKCRTTKGY 2275
Query: 1430 WRIYQEPHTNPTASFVTDVWQSFGDVLDSIFFIVQHFLYNEKEMIEWISKSHKNVNNYHS 1489
+ P T+ + + F I+ V+ L +++ ++EW+ + ++Y
Sbjct: 2276 FETCMAPSTDIDLGYAGHSARCF------IYLSVKDLLGSKRMIVEWVQNTSTPTSSYVP 2329
Query: 1490 LVVLRLVVIICLLHLNFGKFG-SSLRDLLGRKYVSRLLPLEFCDALR---KIENHNCLNV 1545
++LRLV+ + L+ +N + L + +V LP EF + +R ++++ N
Sbjct: 2330 -ILLRLVITLYLVTVNQDDGDLYEVTAFLEKNHVFTDLPPEFSEKIRNALRMKSRTVKNF 2388
Query: 1546 HEI-SQAFKKIGNPLVIASLGKNCSQFLC-PDAIFVNMKVMKSTDEIFGILYPKMEACQV 1603
+ + A IG +V+ K C PD +N ++ S D +
Sbjct: 2389 MRVFADALAAIGTRMVVMGDIKKAMAHKCQPD---LNADMISSVD------LSDAKKVMA 2439
Query: 1604 QVGTSKDVPSKRPASLPEDTDAQNMNDNTLVMNLDQLCKVFEALKMVDNGNNGNYRRSV- 1662
+ T K K+ LPE N N + L V + K N N + +
Sbjct: 2440 LLSTEKSSSLKQEPQLPEIKSVCNKICNATSGHF-PLTSVGGSQKSTSNFNLSDVDHPLL 2498
Query: 1663 ----KYQVGTSKDVPSKRPASLPED------TDAQNKNDNTMVMNLDQLCKALE------ 1706
+QV ++P K+ SL + + + ++ L +CK +E
Sbjct: 2499 EKFEAFQV----NMPQKKNGSLISQILRSPLSWIEQRAPPVQMLELRHICKQVEEQHVRE 2554
Query: 1707 --ALKMLDYGNNGNHGNSVKYQVGTSKDVPSKRS 1738
AL + D +N HG+ K +G DV +S
Sbjct: 2555 KRALSVKDLHSNREHGDGEK-NIGKIVDVQGSQS 2587
>gi|242074206|ref|XP_002447039.1| hypothetical protein SORBIDRAFT_06g027382 [Sorghum bicolor]
gi|241938222|gb|EES11367.1| hypothetical protein SORBIDRAFT_06g027382 [Sorghum bicolor]
Length = 1625
Score = 584 bits (1505), Expect = e-163, Method: Compositional matrix adjust.
Identities = 325/787 (41%), Positives = 467/787 (59%), Gaps = 42/787 (5%)
Query: 49 VEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPYAQVIAFEELKPYGTNQYG 108
VEKIP SF S+ Y S++ PL+EETR L S LE + AP +++++ E G Y
Sbjct: 1 VEKIPFSFSSLDDYLRSYIAPLIEETRSGLSSCLELIAEAPSSKILSMEAAGKSGL--YF 58
Query: 109 IEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDEDE 168
++VD+W N S E Y GDI +L+ KPE D R G T+ VT V ++D
Sbjct: 59 MDVDFWDNGAGFS-TETYTARNGDIFILSSMKPEATDDFNRYGLTYCLAMVTEVSMNDDY 117
Query: 169 NKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWNSL----HMCGNWKVITQVL 224
K +KVK N + K +L NI+ N RIW +L M N+ VI +L
Sbjct: 118 QKG---FKVKVSNGTGLEGDFSKLVHATFLDNIMTNIRIWKALCFDSSMNNNFTVIRSLL 174
Query: 225 GTDSVVDERCELCSVQRKGQWDEKFGPSFS-STLNESQVGAMLACLRRLDCGHRSGVELI 283
++ ++ C +C+ +K F LN+SQV A+ + + + C H + +LI
Sbjct: 175 APRNMGEDVCAICA--KKDDCLTSFAEQLLLVNLNQSQVDAIESIISAVRCRHLNLTKLI 232
Query: 284 WGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTP 343
WGPPGTGKTKTVS +L L +KCRTL C PTNVA+ + +R LK +KE K+ ++ P
Sbjct: 233 WGPPGTGKTKTVSAMLWALACLKCRTLTCAPTNVAVVGVCTRFLKNLKEFNKQIDKTGLP 292
Query: 344 ICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVS 403
+ LGD+LL GNK + + +E++L+YR +L ECF+ LSGWR+ +SMI EDC S
Sbjct: 293 L-SLGDVLLLGNKYNMDITEELQEVFLDYRADELTECFSSLSGWRYIIASMISFFEDCGS 351
Query: 404 QYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFI 463
+Y + +E ++S + C FL +++++F A +++ C+
Sbjct: 352 RYDMLLED---------DESHDSVC-------------FLDFLKKQFDVAAKAVKKCMMT 389
Query: 464 FCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVR 523
HLP S + + L L+ LL ++ + +++ F E A
Sbjct: 390 LWLHLPGKCFSHENVNNISMLLVWLEKIDALLCDGDLTDESVKRGFDFQSTENSINAEPI 449
Query: 524 KRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKL 583
+L +S CL +L++L NSL NLP + + ++++C + A+L F TASSSY+L
Sbjct: 450 SSIEKELGGAKSLCLKLLKDLRNSL---NLPVSADRNWIQNYCMRNATLIFCTASSSYRL 506
Query: 584 HSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFG 643
H+ I PL+ L++DEAAQ+KE E IPL+L + H VL+GD+CQL +V S++ EAGFG
Sbjct: 507 HNATIAPLDVLIVDEAAQVKECELVIPLRLRWLKHVVLVGDDCQLRPLVRSQVCKEAGFG 566
Query: 644 RSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTE 703
SLFERL LN KHLLNIQYRM+P ISLFPN +FY +ILDG NV S SY K Y+ G
Sbjct: 567 ISLFERLVILNFEKHLLNIQYRMNPCISLFPNAKFYEKKILDGPNVFSSSYNKDYM-GLP 625
Query: 704 FGTYSFINIIGGRE--DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTA 761
FG+Y+FINI GRE + +S RN+VEV+ V+ ++Q ++K+W Q +SIGVVSPY++
Sbjct: 626 FGSYAFINITDGREEKEGAGNSWRNLVEVAVVLHLIQTIFKSWRKRGQGISIGVVSPYSS 685
Query: 762 QVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVN 821
QV AI+ ++G +Y+ DGF V+VKSIDGFQG E+D+II+STVR N G++GF++ QR N
Sbjct: 686 QVAAIKDRLGKKYDTSDGFHVRVKSIDGFQGEEDDVIILSTVRSNGRGNVGFLADNQRTN 745
Query: 822 VALTRAR 828
VALTRAR
Sbjct: 746 VALTRAR 752
>gi|413919137|gb|AFW59069.1| hypothetical protein ZEAMMB73_371687 [Zea mays]
Length = 968
Score = 583 bits (1503), Expect = e-163, Method: Compositional matrix adjust.
Identities = 363/869 (41%), Positives = 500/869 (57%), Gaps = 64/869 (7%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
V SWSL D+ ++ FKD+V++IP +F ++K Y + PLLEE R ++ S LE++ P
Sbjct: 33 VLSWSLADVMNKDLFKDKVKQIPSTFPNLKSYLECYTSPLLEELRAEMSSSLESLSTVPS 92
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRV 150
++ EE + + + ++ E Y GD+++L+D KP +SD R
Sbjct: 93 VRISRIEEKRDKHEIYLASDCQVAK---PHNRPECYTPSVGDVILLSDVKPGHISDTTRN 149
Query: 151 GRTWTFVSVTTVPD-DEDENKKENRYKVKARNNMQVHDKTKK-----SFFFIYLTNILPN 204
GR + VT DE ++ +Y + A + D ++ S F L NI+
Sbjct: 150 GRPYRVAFVTDADGGDEYDDSPPAKYGIVASGKIDAADDERQDGKSTSLFAACLLNIVTY 209
Query: 205 KRIWNSLH---MCGNWKVITQVLGTDSVVDERCELCSVQRKGQWD--EKFGPSFSSTLNE 259
RIW L + N +I +++ + S + G D E + + LN
Sbjct: 210 IRIWRCLDYEALRTNRGLIEKMVNYQPI--SSTSENSTEDAGPTDSVEIWTKLSAMELNT 267
Query: 260 SQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAI 319
SQ A+L C+ ++ S LIWGPPGTGKTKT+S+LL + +K TL C PTN+AI
Sbjct: 268 SQNDAVLNCISKMH-SKSSTFTLIWGPPGTGKTKTISVLLWLMREMKHGTLVCAPTNLAI 326
Query: 320 TELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRE 379
++ASR LKLV+E + D+R LGD+LL GNK+R+ V+ ++IYL R+++L
Sbjct: 327 KQVASRFLKLVQE-HSGDTRC------LGDVLLIGNKERMCVDGDLKQIYLYDRVRRLFG 379
Query: 380 CFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGER 439
CFAPL+GW+H SS+ D LE+ SQY +++ +E G+
Sbjct: 380 CFAPLTGWKHHLSSLSDFLENGYSQYLQHLQDSQE----------------------GDT 417
Query: 440 KPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDN 499
F Y R+RF + LR C H+PKS I E ++ ++ L +L+ F N + Q
Sbjct: 418 PSFFSYARKRFAVIYMELRRCFNDLLLHVPKSSILEVNYNSILLLLEMLEEF-NHMIQCR 476
Query: 500 VVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSK 559
E+ K+F +S DE ++ L + R +CL L L L L LP T+SK
Sbjct: 477 YFGDEIRKVFLYSNDEPDQ----TNSSVVTLGKMRIKCLEELSTL---LSCLKLPLTSSK 529
Query: 560 LVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHA 619
+ DFC K AS+ F T SSS K+ + K + FLV+DEAAQLKE E+ IPL+L + HA
Sbjct: 530 PTIRDFCIKSASIVFCTVSSSTKITAN--KKVEFLVVDEAAQLKECETLIPLRLWTLKHA 587
Query: 620 VLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFY 679
VLIGDECQLPA V+SK+ +A FGRSLFERL+SL H KHLLN+QYRMHPSIS+FPN FY
Sbjct: 588 VLIGDECQLPATVKSKVCTDALFGRSLFERLSSLGHEKHLLNMQYRMHPSISIFPNTSFY 647
Query: 680 RNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRE--DFIYHSCRNIVEVSAVIKIL 737
+I D NV K + + YL G+ FG YSFINI GRE D + HS RN VE + + +IL
Sbjct: 648 EGRISDATNVMEKEHRRMYLPGSMFGPYSFINIEDGREERDELGHSKRNFVEAAVIEEIL 707
Query: 738 QKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDI 797
+L +A +K+KV++GV+ PY AQVVAI+ KI E D VK S+DGFQGGEEDI
Sbjct: 708 YRLRRACFKTKRKVTVGVICPYNAQVVAIQGKI--EKMRFDPLQVKTNSVDGFQGGEEDI 765
Query: 798 IIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
II+STVR N+ G +GF+S QR NV LTRARHCLWILG+ TL SS SIW LV DAK R
Sbjct: 766 IILSTVRSNSVGKVGFLSNAQRANVCLTRARHCLWILGNATTLASSGSIWSDLVRDAKDR 825
Query: 858 QCFFNADEE----RNLAKARLEVSKELVE 882
+CFFNA + +AK R ++ + VE
Sbjct: 826 RCFFNASSDYVISHVIAKQRRDLDRVNVE 854
>gi|356569406|ref|XP_003552892.1| PREDICTED: uncharacterized protein LOC100820164 [Glycine max]
Length = 1054
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 365/923 (39%), Positives = 512/923 (55%), Gaps = 126/923 (13%)
Query: 45 FKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPYAQVIAF---EELKP 101
F+ V +IP +F SV Y SF+FPL+EETR L S ++ + AP ++ E+ P
Sbjct: 16 FEQLVRQIPTAFWSVSHYLKSFIFPLIEETRTDLCSSMKMLSEAPACEITDINLSEDYSP 75
Query: 102 YGTNQYGIEVDYWRNTISNSGK--EPYKTLPGDILVLADFKPEKVSDLRRVGRTWTFVSV 159
Y IE+ TI S K + Y+ G ++ L D +P + DL + G ++ +
Sbjct: 76 PHDLLYQIEM----KTIVASDKKGDVYEPEVGHLIALTDKRPTCIDDLNKHGNSYLIALI 131
Query: 160 TTV-PDDEDENKKENRYKVKARNNMQVHDKTKKSF------FFIYLTNILPNKRIWNSLH 212
V ++DEN E + ++++ + + F +YL ++ N RIWN+L+
Sbjct: 132 RKVRKKNDDENVFEVQILASQPIKLEMYWQEDDKYIYGIYGFAVYLFSLTTNMRIWNALN 191
Query: 213 MCGNWKVI---TQVLGTDSVVDERCELC-SVQRKGQWDEKFGPSFSS-TLNESQVGAMLA 267
+ VI Q+L DS V E C C S QR G + LN++Q +L+
Sbjct: 192 SDPDGPVIHVSKQLLQPDSAVGENCAQCYSFQRYTDDGSMIGAAIRLFDLNKAQEEGVLS 251
Query: 268 CLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVL 327
CL +C H++ V+LIWGPPGTGKTKTV+ LL LL+ KCRTL C PTNVA+ E+ SR L
Sbjct: 252 CLAARECSHKNTVKLIWGPPGTGKTKTVASLLFALLKKKCRTLTCAPTNVAVLEVTSRFL 311
Query: 328 KLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLN--YRIKKLRECFAPLS 385
+LV ES + LGDILLFGN+ R+ ++ + + + YR L +CFAPLS
Sbjct: 312 RLVTESIDYHTYG------LGDILLFGNRKRMSIDDRDDLLDIFLDYRANILAKCFAPLS 365
Query: 386 GWRHCFSSMIDLLEDCVSQYHIYVEKLKERED---------------------------- 417
GW+H +I LLE+ QY Y+ K +E+ D
Sbjct: 366 GWKHHLEQVILLLENPEEQYREYL-KCEEKRDYEIDDDDDCLKEENELHAIASQQTKQEK 424
Query: 418 ---------CNVNQ---------SEEKECRKETEGSK---GERKPFL------------K 444
C N+ E + C KE SK E+K FL +
Sbjct: 425 KHMSKDSKICKQNEWMKIINKTLRENRLCFKEANKSKYDKQEKKDFLFRENKIQILTFHE 484
Query: 445 YVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKE 504
+V ++ +R CTHLP S+IS + + LL +L +++ +
Sbjct: 485 FVNKKLNYIWRWMRTFAVDMCTHLPTSFISLRQVKCLFECLDLLKVLAEMLSNNSITDQ- 543
Query: 505 LEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLED 564
QL++ R ECL+ L+ SL ++ LP + +++
Sbjct: 544 ------------------------QLYKARKECLTKLK----SLQKIILPDFFDEYTIKN 575
Query: 565 FCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGD 624
FC KR+ + F TASSS +LH+VE L LVIDEAAQLKE ES IPLQL G+ H VLIGD
Sbjct: 576 FCIKRSRMIFCTASSSARLHAVEHYRLEMLVIDEAAQLKECESNIPLQLPGLRHVVLIGD 635
Query: 625 ECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQIL 684
E QLPA+V+S+IS +AGFGRSLFERL L H KHLLN+QYRMHPSISLFPN++FY QIL
Sbjct: 636 EKQLPALVKSEISGKAGFGRSLFERLVLLGHEKHLLNVQYRMHPSISLFPNMEFYDKQIL 695
Query: 685 DGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCR-NIVEVSAVIKILQKLYKA 743
D +VK +S+EK +L G F YSFIN+ G+++F + R N+VEV+ V +I+ LYK
Sbjct: 696 DSPSVKERSHEKHFLHGDMFKFYSFINVAYGQDEFDEGNSRKNMVEVAVVSEIVLNLYKE 755
Query: 744 WVGSKQKVSIGVVSPYTAQVVAIRKKIG--FEYENKDGFTVKVKSIDGFQGGEEDIIIIS 801
KQ VS+GV+SPY AQV+AI+ +G F + F++KV ++DGFQGGEED+IIIS
Sbjct: 756 SASRKQTVSVGVISPYKAQVLAIQDALGKRFVGNVDNDFSLKVSTVDGFQGGEEDVIIIS 815
Query: 802 TVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFF 861
TVR N G +GF+S QR NVALTRAR+CLWI+G+ TL++S S+W L+ DA+AR C+
Sbjct: 816 TVRYNNMGYVGFLSNFQRTNVALTRARYCLWIVGNSETLMNSGSVWERLILDARARGCYH 875
Query: 862 NADEERNLAKARLEVSKELVEIG 884
NADE+ L+ A ++ ++E+G
Sbjct: 876 NADEDERLSDA---IATSVIELG 895
>gi|357491687|ref|XP_003616131.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
gi|355517466|gb|AES99089.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
Length = 950
Score = 580 bits (1495), Expect = e-162, Method: Compositional matrix adjust.
Identities = 358/905 (39%), Positives = 514/905 (56%), Gaps = 92/905 (10%)
Query: 23 AVGFAGHTVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGL 82
A+GF VFSWS++D+ +Q+ ++++V+KIPE+F S Y SF+ PLLEET L S L
Sbjct: 19 ALGFLD-IVFSWSIKDVLNQNIYRNKVKKIPETFNSPTDYKNSFIPPLLEETHSDLYSNL 77
Query: 83 EAMRRAPYAQVIAFE----ELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLAD 138
+ AP+ +V+ E E K + Y I + N + N G Y+ PGD++ D
Sbjct: 78 LGVSHAPFCEVLKVERESKEFKLPKSLFYQISLKSITNEVEN-GVRKYEPEPGDLIAFTD 136
Query: 139 FKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKK---------ENRYKVKARNNMQVHDKT 189
+P++V+DL+ R ++ P D+ + E+ Y+ D T
Sbjct: 137 HRPKRVNDLK-TQRCPYIIAYVIAPKDDISGEILILSSKCIFESDYR---------KDHT 186
Query: 190 KKSFFFIYLTNILPNKRIW---NSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWD 246
KK + +YL N+ N RIW NS + +I +VL E C+LC G
Sbjct: 187 KK-MYAVYLMNMTTNVRIWKGLNSQTEGEHLDIIKKVLRPCLNSGESCKLC---LSGSNS 242
Query: 247 EKF----GPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTL 302
E F S LNESQ A+ +C+ ++C H + ++LIWGPPGTGKTKTV+ LL +L
Sbjct: 243 EAFLIKEDIIHSQNLNESQEDAVSSCVGMINCCH-ANIKLIWGPPGTGKTKTVACLLFSL 301
Query: 303 LRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVN 362
++K RTL C PTN AI ++A+R+ LV +S + D+ LGDI+LFGN R+K++
Sbjct: 302 FKLKTRTLTCAPTNTAILQVATRIHSLVMDSVEHDTYG------LGDIVLFGNNKRMKLD 355
Query: 363 --PGFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQY-----HIYVEKLKER 415
PG +I+L+YR++ L +CF+PL+GW+ SM L+D +Y H +E+
Sbjct: 356 SYPGLGDIFLDYRVRNLMQCFSPLTGWKQTLESMTQFLKDPKKEYLSQIDHKSLEEFVNE 415
Query: 416 EDCNVNQS----------------EE------KECRKETEGSKGER----KPFLKYVRER 449
+ C+V + EE KE +E + ++ F ++V++R
Sbjct: 416 KHCHVISAYRAYKRISRIDDTMTLEEYVQKLWKEIAEEYRSDEIDKVENFMTFEQFVKKR 475
Query: 450 FKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLF 509
F+ L+ I THLPKS+IS + ++M LL S G L Q + +K
Sbjct: 476 FRELSEKLKFLIQTLYTHLPKSFISLATVKKMFRGLELLRSIGVSLHQ-----AKFKKTL 530
Query: 510 SHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKR 569
E I F + E LR L + + LP + +E FC
Sbjct: 531 DDCEKENIPACFEPSNF---------EIDEFLRLLSLLSNSILLPELNGRGHIEKFCLSN 581
Query: 570 ASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLP 629
A L T SSS KL++ + + FLVIDEAAQLKE ES IPLQL G+ H +LIGDE QLP
Sbjct: 582 ACLILCTVSSSIKLYTEGMAHVKFLVIDEAAQLKECESMIPLQLPGLQHGILIGDEKQLP 641
Query: 630 AMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANV 689
A+V+SKI+D GFGRS+FERL L + KH+LN+QYRMHP+IS+FP +FY QI D V
Sbjct: 642 ALVKSKIADNCGFGRSMFERLVMLGYKKHMLNVQYRMHPAISMFPCKEFYDEQISDAPVV 701
Query: 690 KSKSYEKQYLTGTEFGTYSFINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSK 748
K SY+K +L G + +YSFINI G+E HS +N+VEV+ + +++ L K + ++
Sbjct: 702 KDASYKKSFLEGEMYASYSFINIAKGKEKSGRGHSLKNMVEVAVISEMINNLKKEFKRTQ 761
Query: 749 QKVSIGVVSPYTAQVVAIRKKIG-FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT 807
+KVSIG++SPY AQV I++K+ + + F+V V+SIDGFQGGEEDIIIISTVR N
Sbjct: 762 KKVSIGIISPYNAQVYEIQEKVKQYTSVSDTDFSVSVRSIDGFQGGEEDIIIISTVRSNG 821
Query: 808 GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEER 867
G++GF+S QR NVA+TRAR+CLWILG+ TL +S+SIW L+ DAK R C+ NAD+++
Sbjct: 822 SGNVGFLSNRQRANVAMTRARYCLWILGNASTLANSDSIWRKLIVDAKRRDCYHNADDDK 881
Query: 868 NLAKA 872
LA+
Sbjct: 882 KLARV 886
>gi|6686402|gb|AAF23836.1|AC007234_8 F1E22.16 [Arabidopsis thaliana]
Length = 1075
Score = 580 bits (1494), Expect = e-162, Method: Compositional matrix adjust.
Identities = 370/951 (38%), Positives = 518/951 (54%), Gaps = 142/951 (14%)
Query: 30 TVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAP 89
VFSWSL D+ + + ++ QV KIP +F S K+YF SFV P++EET L S + +RRA
Sbjct: 25 VVFSWSLRDVLNSNLYRGQVGKIPNTFTSTKEYFESFVKPIIEETHADLLSSMGTIRRA- 83
Query: 90 YAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPG-------DILVLADFKPE 142
Q F E+KP G + Y+ T+ + + Y T G D++ + D +P
Sbjct: 84 --QAFKFWEIKP-GKDFKPPRDLYYEVTLQMTNE--YMTKGGQNLLEVNDLIAVTDKRPI 138
Query: 143 KVSDLRRVGRTWTFVSVTTVPDDEDENKKE-------------NRYKVKARNNMQVHDKT 189
++ DLR + V V +EN + +K + ++
Sbjct: 139 RIDDLRFSHEPYLLALVCGV----NENNPHLITILASKPIIFDDDDDIKTSSKRGKGERK 194
Query: 190 KKSFFFIYLTNILPNKRIWNSLHM---CGNWKVITQVLGTDSVVDE----RCELCSVQRK 242
SFF + L N++ N RIW +LH GN K+I++VL +++ VD C+ S
Sbjct: 195 SLSFFGVNLINMMTNIRIWTALHPNPEGGNLKLISRVLQSNNEVDGGSCVSCKENSESVV 254
Query: 243 GQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTL 302
+ + SF LN SQ A+L CL C H + ++LIWGPPGTGKTKT S+LLL
Sbjct: 255 SDYSARMLRSFK--LNSSQEDAILRCLEAKSCNHSNNIKLIWGPPGTGKTKTTSVLLLNF 312
Query: 303 LRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVN 362
L+++CRTL C PTN+A+ E+ SR++KLV ES + D LGDI+LFGNK+R+K++
Sbjct: 313 LKMRCRTLTCAPTNIAVLEVCSRLVKLVSESLRFDGYG------LGDIVLFGNKERMKID 366
Query: 363 PGFE--EIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNV 420
+ +++L YR+ +L CF L+GWR + MI LL D ++ R+ +V
Sbjct: 367 DREDLFDVFLEYRVDELYRCFMALTGWRANVNRMICLLSDPKHEF---------RQFKSV 417
Query: 421 NQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYIS------ 474
N + F +V ER L + C HLP S +S
Sbjct: 418 NTT---------------LLSFKDFVEERLSRLRYDLHHQFTTLCLHLPTSLLSFRVAEK 462
Query: 475 ----ENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQL 530
N + + A + D +G + ++ + DE S
Sbjct: 463 MNQTNNLLRNIAASDVMRDGYGRMKYK-----------LKDTGDENDS------------ 499
Query: 531 HQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKP 590
R +CL +L ++ S+ LP SK L+ C A L F TASSS +LH P
Sbjct: 500 --RTQDCLEMLTSISMSI---KLPDFISKFELQKLCLDNAYLLFCTASSSARLHMSS--P 552
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVES---------------- 634
+ LVIDEAAQLKE ES IPLQL G+ HA+LIGDE QLPAM++S
Sbjct: 553 IQLLVIDEAAQLKECESAIPLQLRGLQHAILIGDEKQLPAMIKSNVGSLILTNYTHIHSL 612
Query: 635 ---------KISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILD 685
+I+ EA GRSLFERL L H+K LLN+QYRMHPSIS+FPN +FY +ILD
Sbjct: 613 LFAYLISYVQIASEADLGRSLFERLVLLGHNKQLLNMQYRMHPSISIFPNREFYDMKILD 672
Query: 686 GANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAW 744
+V+ +SYEK++L +G YSFINI GRE F +S +N+VEVS V +I+ KLY
Sbjct: 673 APSVRLRSYEKKFLPEKMYGPYSFINIAYGREQFGEGYSSKNLVEVSVVAEIVSKLYSVS 732
Query: 745 VGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 804
+ + +S+GV+SPY AQV AI+++IG +Y + FTV V+S+DGFQGGEEDIIIISTVR
Sbjct: 733 RKTGRTISVGVISPYKAQVFAIQERIGEKYNTEGTFTVSVRSVDGFQGGEEDIIIISTVR 792
Query: 805 CNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
N G+IGF+S QR NVALTRAR+CLWILG+E TL ++ S+W LV DAKAR CF NA+
Sbjct: 793 SNGNGAIGFLSNQQRTNVALTRARYCLWILGNEATLTNNRSVWRQLVDDAKARNCFHNAE 852
Query: 865 EERNLAKARLEVSK----ELVEIGAESLTSTSQGGKKEEFEFEFVKAFRSI 911
E+ +LA+ +E S +L ++ + L S K +EF+K+ +I
Sbjct: 853 EDESLAQC-IERSTTALDDLNKLQNKKLISFENSIWKVWLSYEFLKSLETI 902
>gi|410129749|dbj|BAM64828.1| hypothetical protein [Beta vulgaris]
Length = 1296
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 363/923 (39%), Positives = 528/923 (57%), Gaps = 114/923 (12%)
Query: 11 MEGKGCSSS-SKKAVGFAGHTVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFP 69
ME C ++GF VFSWS D+ +++ +KD+V++IPE F S Y +F P
Sbjct: 127 MEKPSCKKKMESSSLGFL-ELVFSWSFRDVLNRNLYKDKVQRIPEIFSSTAHYTSAFEKP 185
Query: 70 LLEETRMQLRSGLEAMRRAPYAQVIAFEELKPYGTNQ---YGIEVDYWRNTISNSGKEPY 126
L EETR L SG+E++ AP ++ E K Y + Y I + +N G Y
Sbjct: 186 LAEETRASLCSGMESVGNAPACEISRIELSKDYNPPKELYYNILSKKIADFKNNGGH--Y 243
Query: 127 KTLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENK----KENRYKVKARNN 182
+ GD++VL++ KP ++ DL G+ + VTT+ + D + K+ ++K +
Sbjct: 244 EPETGDLIVLSNIKPRRIEDLNVPGKPFAVAFVTTMEEGSDMTRILLSKDISSELKPKPE 303
Query: 183 MQVHDKTKKSFFFIYLTNILPNKRIWNSLH-----MCGNWKVITQVLGTDSVVDERCELC 237
+V F YL N++ N RIW +L+ + N+ + + L +S E C +C
Sbjct: 304 KRVR------VFATYLINLVTNMRIWRALNPDPQGLSMNFAL--KALRPNSDEGEDCTIC 355
Query: 238 ----SVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRS-GVELIWGPPGTGKT 292
+G D S L+ESQ A+L+ + C H++ V+LIWGPPGTGKT
Sbjct: 356 ISNVDSTVRGDID-------SFKLDESQKNAVLSSIAMRKCSHQNDSVKLIWGPPGTGKT 408
Query: 293 KTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILL 352
KTV+ LL +LL++KCRTL+C PTN+A+ ++A R++ L+ +S K D+ LGD++L
Sbjct: 409 KTVASLLFSLLKLKCRTLSCAPTNIAVMQVAKRLMGLLLQSLKHDTYG------LGDVVL 462
Query: 353 FGNKDRLKVNPGFE--EIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYV- 409
FGN +R+KV+ E ++L+YR + L +C +P+ GW+H SM LLED V QY +Y+
Sbjct: 463 FGNGERMKVDDHDELLNVFLDYRAEVLSKCLSPIDGWKHTLVSMTSLLEDPVEQYKMYLQ 522
Query: 410 -------------------EKLKEREDCNVNQSEEKECRKE--------TEGSKG--ERK 440
E+ E ED ++ + + RK +GS +RK
Sbjct: 523 NRGVFDEEEDEEDSDGSKSEESNECEDTKCSRLKRSDNRKHWKEVIDKSMKGSNNNDDRK 582
Query: 441 --------PFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFG 492
F ++V++RF L + THLP S+I+ ++ + M++L LL
Sbjct: 583 YKSNHELLTFEEFVKKRFYSIGDRLAFLMKNLYTHLPTSFITSDAVKSMISLLDLL---- 638
Query: 493 NLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELN 552
++ EK+ QL +++E L +L++L ++
Sbjct: 639 ------KILEDAREKV----------------NQTHQLTMKKAEFLEILKSLP---EQFP 673
Query: 553 LPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQ 612
+P + ++ C A L F TASS+ K+ + ++P+ LVIDEA QLKE ES IPLQ
Sbjct: 674 VPLFSDIQAIKTTCLMNARLIFCTASSAAKIQTEGMEPIEMLVIDEAGQLKECESLIPLQ 733
Query: 613 LAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISL 672
+ G+ +A+LIGD+ QLPAMV+SK+++ A FGRSLFERL +L KHLL QYRMHPSIS
Sbjct: 734 VPGLKNAILIGDDKQLPAMVQSKVAENADFGRSLFERLANLGKKKHLLKTQYRMHPSISS 793
Query: 673 FPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIY-HSCRNIVEVS 731
FPN FY QI+D NVK +SYEK +L FGTYSFIN+ G+E+F +S RN+VE +
Sbjct: 794 FPNEVFYGKQIIDAPNVKERSYEKCFLHENMFGTYSFINVSKGKENFDKGYSPRNLVEAA 853
Query: 732 AVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYEN-KD-GFTVKVKSIDG 789
V KI+ KL+ + +KVS+GV+SPY QV I +KIG +Y KD GF+V V+S+DG
Sbjct: 854 VVNKIIAKLFNEHCITGKKVSVGVISPYKGQVGLIEEKIGKKYVTYKDHGFSVSVRSVDG 913
Query: 790 FQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGA 849
FQGGEED+IIIS+VR N GS+GF+S QR NVALTRARHCLWI+G+ TLI+SES+W
Sbjct: 914 FQGGEEDVIIISSVRSNGKGSVGFLSNHQRTNVALTRARHCLWIVGNGTTLINSESVWKE 973
Query: 850 LVCDAKARQCFFNADEERNLAKA 872
LV DAK R CF+NA+E ++L KA
Sbjct: 974 LVVDAKLRGCFYNAEENKDLDKA 996
>gi|222613192|gb|EEE51324.1| hypothetical protein OsJ_32291 [Oryza sativa Japonica Group]
Length = 1402
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 346/935 (37%), Positives = 511/935 (54%), Gaps = 122/935 (13%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
V SWS++ I ++ +D+V KIPE+F S++QY SF PLLEE R + S +E + +APY
Sbjct: 42 VLSWSVDQILNKDLLRDKVAKIPETFSSMEQYMTSFFGPLLEEVRGDMCSSMEDISKAPY 101
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRV 150
A V++ ++ G Y I++D WR E YK D+L++++ +P SD+ +
Sbjct: 102 ASVLSVNAMRK-GKGSYEIKLDKWRGVSHGCAIEGYKPKAADLLLISETRPANQSDILKQ 160
Query: 151 GRTWTFVSV-----------------TTVPDDEDENKKENRY-KVKAR------------ 180
++ V V T V DE + NRY K+ A
Sbjct: 161 SKSCVIVWVGKVQGNKMTVKASRRMETGVHGDERQQMGMNRYDKLYAEGFDKSWEMLDQE 220
Query: 181 -------------NNMQVHDKTKK------------------------SFFFIYLTNILP 203
N + H K +K SF YLTN++
Sbjct: 221 AVAPESSNSFMHENGRKEHSKVRKCFEKCSDLQEQNEMGTCGNSSKRWSFCATYLTNMIT 280
Query: 204 NKRIWNSLH--MCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQ 261
R+W L + + K++ + G C+ C + + + + LN+SQ
Sbjct: 281 YDRVWVVLRRGLTMDSKIVLSMFGKKKKATGHCKYCGSETHDKIKDYL---CNFKLNDSQ 337
Query: 262 VGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITE 321
+ A+ +C+ +C H S V LIWGPPGTGKT TVS++L LL + R LAC PTN+A+ +
Sbjct: 338 LDAVASCISASECCHNSSVGLIWGPPGTGKTTTVSVMLHMLLMKEQRILACAPTNMAVLQ 397
Query: 322 LASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECF 381
+ASR+++L+++ S++ GDI+LFGNKDRL + ++YL+ R+ KL F
Sbjct: 398 VASRLIELIQDF------SSSHCYSFGDIVLFGNKDRLHIGKELSKVYLDDRVHKLLRYF 451
Query: 382 APLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKERED-CNVNQSEEKECRKETEGSKGERK 440
GW+ S++ L +C+S+Y + ++ + D CN+
Sbjct: 452 KREDGWKARVDSVMKFLMNCISRYQMSLDIQQASSDGCNLT------------------- 492
Query: 441 PFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNV 500
F KY +F V L CI F HLP + N M+ KSLLD LL D+V
Sbjct: 493 -FKKYFTSKFSTLVKELARCIDTFFDHLPTDSLGRN-LDRMMFAKSLLDKLQQLLCADDV 550
Query: 501 VSKELEKLFSHSVDEGISWAFVRKR---YLLQLHQR----------RSECLSVLRNLWNS 547
+ L +F S DE I + + LH +S C+ L +L
Sbjct: 551 SDELLFTIFKPS-DEPIDSFDSHDQTDDATVDLHDHDISLDDPLEIKSLCIKTLMDL--- 606
Query: 548 LDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVE-IKPLNFLVIDEAAQLKESE 606
++ LPC ++ + D C KRA L F TASSS++L ++ + P++ LVIDEAAQLKE E
Sbjct: 607 -SKMRLPCEDNESSIRDLCLKRAKLVFCTASSSFELFRLQNVMPISILVIDEAAQLKECE 665
Query: 607 STIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRM 666
+ +PL L GI H +LIGDE QL ++V+SKI+ +A FGRSL+ERL ++ + KHLL +QYRM
Sbjct: 666 ALVPLLLPGIEHILLIGDENQLSSLVKSKIAKDADFGRSLYERLCTMGYRKHLLEVQYRM 725
Query: 667 HPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRE--DFIYHSC 724
HP I+ FPN FY N+I DG +V+ + Y K YL G +G YSFI+I E D + S
Sbjct: 726 HPGINKFPNANFYDNRISDGPSVQQEDYMKSYLPGPIYGAYSFIHIENDMEMLDELGQSS 785
Query: 725 RNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKV 784
+N+VEV+ I+++L K +Q+ S+GV+SPYTAQV+A+++++G +++N + +V V
Sbjct: 786 KNMVEVAVATNIVERLAKECSEKRQRTSLGVISPYTAQVIALQERLGKQFKNHEFLSVTV 845
Query: 785 KSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSE 844
KSIDGFQGGEEDII+ISTVR N G +GF+S R+NVALTRA++CLWILG+ TL++S
Sbjct: 846 KSIDGFQGGEEDIILISTVRSNKNGKVGFLSDAGRINVALTRAKYCLWILGNGATLLASN 905
Query: 845 SIWGALVCDAKARQCFFNADEERNLAKARLEVSKE 879
SIW LV D+K R CFFNA +++NLA+ + +KE
Sbjct: 906 SIWAELVHDSKRRGCFFNALDDKNLAEIIMHATKE 940
>gi|218184942|gb|EEC67369.1| hypothetical protein OsI_34480 [Oryza sativa Indica Group]
Length = 1437
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 346/935 (37%), Positives = 511/935 (54%), Gaps = 122/935 (13%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
V SWS++ I ++ +D+V KIPE+F S++QY SF PLLEE R + S +E + +APY
Sbjct: 77 VLSWSVDQILNKDLLRDKVAKIPETFSSMEQYMTSFFGPLLEEVRGDMCSSMEDISKAPY 136
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRV 150
A V++ ++ G Y I++D WR E YK D+L++++ +P SD+ +
Sbjct: 137 ASVLSVNAMR-KGKGSYEIKLDKWRGVSHGCAIEGYKPKAADLLLISETRPANQSDILKQ 195
Query: 151 GRTWTFVSV-----------------TTVPDDEDENKKENRY-KVKAR------------ 180
++ V V T V DE + NRY K+ A
Sbjct: 196 SKSCVIVWVGKVQGNKMTVKASRRMETGVHGDERQQMGMNRYDKLYAEGFDKSWEMLDQE 255
Query: 181 -------------NNMQVHDKTKK------------------------SFFFIYLTNILP 203
N + H K +K SF YLTN++
Sbjct: 256 AVAPESSNSFMHENGRKEHSKVRKCFEKCSDLQEQNEMGTCGNSSKRWSFCATYLTNMIT 315
Query: 204 NKRIWNSLH--MCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQ 261
R+W L + + K++ + G C+ C + + + + LN+SQ
Sbjct: 316 YDRVWVVLRRGLTMDSKIVLSMFGKKKKATGHCKYCGSETHDKIKDYL---CNFKLNDSQ 372
Query: 262 VGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITE 321
+ A+ +C+ +C H S V LIWGPPGTGKT TVS++L LL + R LAC PTN+A+ +
Sbjct: 373 LDAVASCISASECCHNSSVGLIWGPPGTGKTTTVSVMLHMLLMKEQRILACAPTNMAVLQ 432
Query: 322 LASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECF 381
+ASR+++L+++ S++ GDI+LFGNKDRL + ++YL+ R+ KL F
Sbjct: 433 VASRLIELIQDF------SSSHCYSFGDIVLFGNKDRLHIGKELSKVYLDDRVHKLLRYF 486
Query: 382 APLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKERED-CNVNQSEEKECRKETEGSKGERK 440
GW+ S++ L +C+S+Y + ++ + D CN+
Sbjct: 487 KREDGWKARVDSVMKFLMNCISRYQMSLDIQQASSDGCNLT------------------- 527
Query: 441 PFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNV 500
F KY +F V L CI F HLP + N M+ KSLLD LL D+V
Sbjct: 528 -FKKYFTSKFSTLVKELATCIDTFFDHLPTDSLGRN-LDRMMFAKSLLDKLQQLLCADDV 585
Query: 501 VSKELEKLFSHSVDEGISWAFVRKR---YLLQLHQR----------RSECLSVLRNLWNS 547
+ L +F S DE I + + LH +S C+ L +L
Sbjct: 586 SDELLFTIFKPS-DEPIDSFDSHDQTDDATVDLHDHDISLDDPLEIKSLCIKTLMDL--- 641
Query: 548 LDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVE-IKPLNFLVIDEAAQLKESE 606
++ LPC ++ + D C KRA L F TASSS++L ++ + P++ LVIDEAAQLKE E
Sbjct: 642 -SKMRLPCEDNESSIRDLCLKRAKLVFCTASSSFELFRLQNVMPISILVIDEAAQLKECE 700
Query: 607 STIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRM 666
+ +PL L GI H +LIGDE QL ++V+SKI+ +A FGRSL+ERL ++ + KHLL +QYRM
Sbjct: 701 ALVPLLLPGIEHILLIGDENQLSSLVKSKIAKDADFGRSLYERLCTMGYRKHLLEVQYRM 760
Query: 667 HPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRE--DFIYHSC 724
HP I+ FPN FY N+I DG +V+ + Y K YL G +G YSFI+I E D + S
Sbjct: 761 HPGINKFPNANFYDNRISDGPSVQQEDYMKSYLPGPIYGAYSFIHIENDMEMLDELGQSS 820
Query: 725 RNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKV 784
+N+VEV+ I+++L K +Q+ S+GV+SPYTAQV+A+++++G +++N + +V V
Sbjct: 821 KNMVEVAVATNIVERLAKECSEKRQRTSLGVISPYTAQVIALQERLGKQFKNHEFLSVTV 880
Query: 785 KSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSE 844
KSIDGFQGGEEDII+ISTVR N G +GF+S R+NVALTRA++CLWILG+ TL++S
Sbjct: 881 KSIDGFQGGEEDIILISTVRSNKNGKVGFLSDAGRINVALTRAKYCLWILGNGATLLASN 940
Query: 845 SIWGALVCDAKARQCFFNADEERNLAKARLEVSKE 879
SIW LV D+K R CFFNA +++NLA+ + +KE
Sbjct: 941 SIWAELVHDSKRRGCFFNALDDKNLAEIIMHATKE 975
>gi|224077420|ref|XP_002305251.1| predicted protein [Populus trichocarpa]
gi|222848215|gb|EEE85762.1| predicted protein [Populus trichocarpa]
Length = 1011
Score = 574 bits (1479), Expect = e-160, Method: Compositional matrix adjust.
Identities = 357/871 (40%), Positives = 506/871 (58%), Gaps = 85/871 (9%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
VFSWS+ED+ ++ +KDQVE+IP SF S Y +F+ PL ET L S E++ AP
Sbjct: 22 VFSWSIEDVLNKDLYKDQVEEIPNSFMSTAHYMKAFITPLHVETHADLLSSTESLAGAPT 81
Query: 91 AQVIAFEELKPYGTNQ---YGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDL 147
+++ + K Y + Y I ++ R G P+ GD++ L + K + + DL
Sbjct: 82 YRILRVRKSKDYKPPKDLFYEISMEETR-----GGYVPW---VGDLIALTNVKLKCIDDL 133
Query: 148 RRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDK---TKKSFFFIYLTNILPN 204
R+ +++ V V K+ NR ++ + D+ + F ++L N++ N
Sbjct: 134 RKTQQSYHVAFVHAV-------KRGNRLTASILSSKPIVDEEGLKNGTLFAVHLINLMTN 186
Query: 205 KRIWNSLHM---CGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSF--SSTLNE 259
RIW SLH+ N VI +VL + D C +CS ++K SS LN
Sbjct: 187 LRIWRSLHLELEGRNMNVIEKVLQNNFNDDGDCTICSSRKKSDAASACIRDTLQSSNLNS 246
Query: 260 SQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAI 319
SQ A+L+C+ C H+ V+L+ GPPGTGKTKT S LL LLR+KCRTL C PTN+A+
Sbjct: 247 SQEAAVLSCIHTARCWHQYTVKLVQGPPGTGKTKTASCLLHALLRMKCRTLTCAPTNIAV 306
Query: 320 TELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEE---IYLNYRIKK 376
E+A+RV+ V + + ++ +GDI+LFGN +R+KV+ + ++L++R
Sbjct: 307 VEVAARVVSTVADLVEYETYG------MGDIILFGNWERMKVDGDQNDLLHVFLDHRADI 360
Query: 377 LRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSK 436
L + F P +GW+ +S+I LLED +QYH+Y++ N+ + C +
Sbjct: 361 LEKSFDPSTGWKRILASLISLLEDSEAQYHLYLQD-------NMGKEGLLTCEQ------ 407
Query: 437 GERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLF 496
+V +RF + L+ CI THLP + IS + M L+ S LL
Sbjct: 408 --------FVWKRFDFSGKQLKFCIVNLYTHLPTTLISLQVMRIMTRALDLMTSLETLLL 459
Query: 497 QDNVVSKELEKLFSHSVDEGISWAFVRKRY-LLQLHQRRSECLSVLRNLWNSLDELNLPC 555
+ + L+++ + DE RK + ++L + ECL+ LR L SL + +P
Sbjct: 460 SLSAADEGLKQILGENEDEE------RKLHNRIKLINEKRECLNTLRLL--SL-KFQVPE 510
Query: 556 TTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAG 615
K +E FC A L F T SSS +LHS+ + PL LVIDEAAQLKE ESTIPLQL G
Sbjct: 511 FADKNAIEKFCLSNACLIFCTVSSSARLHSIRMAPLRCLVIDEAAQLKECESTIPLQLFG 570
Query: 616 INHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPN 675
++HA+LIGDE QLPA+V S+IS +AGFGRSLFERL L HLLNIQYRMHPSISLFPN
Sbjct: 571 LHHAILIGDERQLPAIVNSEISGKAGFGRSLFERLVKLGCKSHLLNIQYRMHPSISLFPN 630
Query: 676 LQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFI-YHSCRNIVEVSAVI 734
+FY Q+LD NV+ Y +++L G F +YSFINI G+E+F+ S +N VE +A
Sbjct: 631 TEFYGRQVLDAPNVQETGYRRRFLQGDMFESYSFINIAHGKEEFVEQRSFKNTVEAAAAA 690
Query: 735 KILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG-FEYENKDGFTVKVKSIDGFQGG 793
I+ +L+K G+ QKVSIG++SPY AQV AI++KIG F ++ F+V V ++DGFQGG
Sbjct: 691 DIVGRLFKDINGTGQKVSIGIISPYQAQVHAIQEKIGKFISDSDSAFSVSVGTVDGFQGG 750
Query: 794 EEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCD 853
EED+IIISTVR N GS+GF+S PQR NVALTRAR S SIW +V D
Sbjct: 751 EEDLIIISTVRSNENGSVGFVSNPQRANVALTRAR--------------SGSIWKKIVND 796
Query: 854 AKARQCFFNADEERNLAKARLEVSKELVEIG 884
AK RQCF+NA+E+ +L +A +++ L+E G
Sbjct: 797 AKHRQCFYNAEEDESLDQA---ITESLIEHG 824
>gi|242062912|ref|XP_002452745.1| hypothetical protein SORBIDRAFT_04g031650 [Sorghum bicolor]
gi|241932576|gb|EES05721.1| hypothetical protein SORBIDRAFT_04g031650 [Sorghum bicolor]
Length = 956
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 358/907 (39%), Positives = 513/907 (56%), Gaps = 79/907 (8%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
+FSW+L+D+ +++ K +V+KIP +F S++ Y SF PL+EETR L S LE ++ AP
Sbjct: 54 MFSWTLQDVLNKNLLKKKVKKIPRTFISLENYMQSFTAPLIEETRADLCSALEGIKHAPA 113
Query: 91 AQVIAFEELKPYGTNQ--YGIEVDYWR----NTISNSGKEPYKTLPGDILVLADFKPEKV 144
V+ E+L T+Q +GI V + +T S ++ Y D+L+L D KP +
Sbjct: 114 TDVVRMEQLD---TDQAIFGIAVRKAKVDSESTQSQRERDVYAPRDADVLLLTDRKPRHM 170
Query: 145 SDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPN 204
SDL R +++ SV + +R + ++L N+
Sbjct: 171 SDLGRTRKSYVLGSVLRANSGNGTVVRLSRAPEEG-----------LPLVAVFLINMTTY 219
Query: 205 KRIWNSLHM----CGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNES 260
RI N+L + C N +I +VL E S DE + LN S
Sbjct: 220 NRILNALDVHAAACRNTSIIQKVLNPK----EYNSSTSGPPLHLLDEALSGLENFELNAS 275
Query: 261 QVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAIT 320
Q+ A+ C+ + S V LIWGPPGTGKTKT+S LL ++L RT+ C PTN A+
Sbjct: 276 QLMAVHDCVSAVQQPTCS-VRLIWGPPGTGKTKTISTLLWSMLVKNHRTVTCAPTNTAVV 334
Query: 321 ELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPG-FEEIYLNYRIKKLRE 379
E+ASRVL LV ES R C L D++LFGN+ R+ V G ++I++ R+++LR+
Sbjct: 335 EVASRVLDLVDESSSGGGRHGRK-CFLSDVVLFGNEGRMGVEEGNLQKIFMESRVRRLRQ 393
Query: 380 CFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKL----------------------KERED 417
C P +GW SSM+ LL+ +YH YV+ L K RE+
Sbjct: 394 CLMPGTGWAQSLSSMLRLLQHPSVEYHRYVQGLESEIRELVSDENDLRDELGRYLKNREE 453
Query: 418 CNVNQSEEK--ECRKETEGSKGERK------PFLKYVRERFKCAVVSLRNCIFIFCTHLP 469
EK E +K+ E + E + PF Y + + V L C+ F LP
Sbjct: 454 LTNRTKVEKVQEIQKKLEKIQKEIRELKEEMPFKIYFQSNYTMLVNHLHTCVKTFGDDLP 513
Query: 470 KSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEG-ISWAF------V 522
+S SE +F+ M L +LL +FG L+ + ++L+ LF ++ D+G I F V
Sbjct: 514 RSVTSEENFRCMAELPALLTAFGELVQSEP--EQQLQALFRNAEDDGGIRSLFRSLVSQV 571
Query: 523 RKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYK 582
+ +L + RS C+ L++L D LP +EDF +RA TASSSY+
Sbjct: 572 QTDVSFELKEARSSCVQKLQHLS---DHFELPDMFESRTIEDFLLQRAKSVLCTASSSYR 628
Query: 583 LHSVE-IKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAG 641
LH ++ +P LV+DEAAQLKE ES IP+QL G+ HAVLIGDE QLPA+V+SK+ ++A
Sbjct: 629 LHCLQNAQPFEVLVVDEAAQLKECESLIPMQLPGVRHAVLIGDEYQLPALVKSKVCEDAE 688
Query: 642 FGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTG 701
FGRSLF RLTSL KHLL++QYRMHP IS FP FY +I DG NV ++YE+++L+G
Sbjct: 689 FGRSLFVRLTSLGQPKHLLDVQYRMHPWISKFPVESFYDGRITDGPNVLKRNYERRHLSG 748
Query: 702 TEFGTYSFINIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPY 759
+G+YSFINI G E H S N +E +AV++ILQ+L+K V +K+ V +GVVSPY
Sbjct: 749 PMYGSYSFINIDSGNESTGKHDRSLINSIEAAAVVRILQRLFKESVDTKRGVRVGVVSPY 808
Query: 760 TAQVVAIRKKI-GFEYENKDG--FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISK 816
QV AI++KI G +G F+VKV+S+DGFQG EED+II STVR N G IGF++
Sbjct: 809 KGQVRAIQEKITGAALAAHEGGLFSVKVRSVDGFQGAEEDVIIFSTVRSNKAGKIGFLAD 868
Query: 817 PQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEV 876
R NVALTRA+HCLWILG+ +TL S+++IW +V DAK R C+F+A ++++L ++
Sbjct: 869 INRTNVALTRAKHCLWILGNAKTLASAKTIWRGIVADAKDRGCYFDATDDKDLNNVIIKA 928
Query: 877 SKELVEI 883
+ EL ++
Sbjct: 929 AIELDQV 935
>gi|357491667|ref|XP_003616121.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
gi|355517456|gb|AES99079.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
Length = 978
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 350/899 (38%), Positives = 511/899 (56%), Gaps = 94/899 (10%)
Query: 30 TVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAP 89
VFSW+L+D+ +++ FK QV KIP++F S Y SF L+EET L S L ++ +A
Sbjct: 13 VVFSWTLDDLLNETLFKYQVPKIPKTFLSTNDYTNSFFPALIEETHSDLYSSLMSVPKAS 72
Query: 90 YAQVIAFEELK----PYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVS 145
+ ++ E K PY Y I + + + GK Y+ GD++ + +P V
Sbjct: 73 FCEIRTMEISKVFNPPYDLF-YKITLKNITDEVYGVGK--YEPEVGDLIAFTNIRPRSVD 129
Query: 146 DLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNK 205
DL R+ R + + + +DE E + +++ +K +K + + L N+ N
Sbjct: 130 DLSRIKR---YCHIAYIHGSKDEFTDEIPILLSYEFDLK-RNKAQK-LYAVCLINMTTNV 184
Query: 206 RIWNSLH--MCG-NWKVITQVLGTDSVVDERCELC-SVQRKGQWDEKFGPSF-SSTLNES 260
RIW +L+ M G + +I +VL S +++ C+ C S G+ + + + LNES
Sbjct: 185 RIWKALNSEMEGSDMNIIQKVLQPYSRMEQNCQTCLSGVNLGRSNSRVKTIIKAQNLNES 244
Query: 261 QVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAIT 320
Q A+L+CL C H ++LIWGPPGTGKTKTV+ +L LL+++ RTL C PTN A+
Sbjct: 245 QKDAILSCLHMKKCHHNDPIKLIWGPPGTGKTKTVASMLFCLLKLRIRTLTCAPTNTAVL 304
Query: 321 ELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNP--GFEEIYLNYRIKKLR 378
+ SR+ + K+S + S LGDILLFGN R+K+ G E++L+ R+ L
Sbjct: 305 AVVSRLHSIAKDSLEHGSYG------LGDILLFGNSKRMKIESYKGLGEVFLDNRVDDLL 358
Query: 379 ECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEE------------- 425
CF+P++GW++C SMI LL+D QY +Y L + + NV EE
Sbjct: 359 YCFSPMTGWKNCLESMISLLKDPEEQYALY---LNSKHNENVMSLEEFAVGNYSHVKPAY 415
Query: 426 ----KECR-----------KETEGSKGERKPFLK-------------YVRERFKCAVVSL 457
K C+ K+ G E+ + + +++F C L
Sbjct: 416 LSYKKRCKYHCLLTLEEFVKKKYGYIVEQYDIYQDDKKVSVGMSMEQFFKQKFCCFGGKL 475
Query: 458 RNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSH-SVDEG 516
++ + CTHLP S++S ++ + LL S L Q SK+ + L H V +
Sbjct: 476 KSLMKTLCTHLPTSFVSLKVAMKIFRVLELLKSLEVSLSQ----SKQKQSLNDHFGVGQR 531
Query: 517 I-SW----AFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRAS 571
I SW +F ++ +L L C + + LP TSK + FC K A
Sbjct: 532 IFSWFGWLSFEKEEFLHTL------CFLC--------ETIKLPKLTSKYGISQFCLKNAC 577
Query: 572 LFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAM 631
L F TASSS KL++ +K + FLVIDEAAQLKE ES IPLQL G+ +LIGDE QLPAM
Sbjct: 578 LLFCTASSSSKLYTEGMKRVEFLVIDEAAQLKECESAIPLQLHGLKRCILIGDERQLPAM 637
Query: 632 VESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKS 691
V+SKI+D A FGRSLFERL L + KH+L++QYRMHPSIS+FP+ +FY Q+ D V+
Sbjct: 638 VKSKIADRAEFGRSLFERLVLLGYKKHMLDVQYRMHPSISMFPSKEFYDGQLSDANIVRE 697
Query: 692 KSYEKQYLTGTEFGTYSFINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQK 750
SY K++L G +G+YSFINI G+E + HS +N++E +A+ +I+ +L K +V ++ K
Sbjct: 698 ISYNKRFLEGKMYGSYSFINISKGKEQCNHDHSLKNVIEAAAISEIIGRLKKEFVRARNK 757
Query: 751 VSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGS 810
VSIG++SPY AQV I++K+ + F+V V+S+DGFQGGEEDIIIISTVR N G
Sbjct: 758 VSIGIISPYKAQVHEIQEKVKQYMVSDPNFSVSVRSVDGFQGGEEDIIIISTVRSNLSGK 817
Query: 811 IGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNL 869
+GF+S QR NVA+TRAR+CLWI+G+ TL++S S+W +V DAK R CF N DE++ L
Sbjct: 818 VGFLSNRQRANVAITRARYCLWIVGNATTLVNSNSVWRKVVVDAKERDCFHNTDEDKKL 876
>gi|357460653|ref|XP_003600608.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
gi|355489656|gb|AES70859.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
Length = 897
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 354/881 (40%), Positives = 490/881 (55%), Gaps = 96/881 (10%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
VFSWSL+DI + F D+V +IP++F S Y SF+ PL+EETR +L S ++ + +AP
Sbjct: 17 VFSWSLQDILNDDLFHDKVRQIPKTFSSGGHYLDSFISPLIEETRTELCSSIKMVSKAPA 76
Query: 91 AQVIAFE---ELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDL 147
++ FE + P Y IE+ N S+ + ++ G ++ L D +P + DL
Sbjct: 77 WEITDFELSNDYDPPLDLLYKIEIKTGAN--SDGDGDIFEPETGQLIALTDRRPTCIDDL 134
Query: 148 RRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVH-------DKTKKSFFFIYLTN 200
G +++ S+ V E E+ Y+ K + + D T F +YL N
Sbjct: 135 NTPGNSYSIASIKRVRKKE---YTEDVYEAKILASKPIELEQYRQKDDTYTYGFGVYLCN 191
Query: 201 ILPNKRIWNSLHMCGNWK---VITQVLGTDSVVDERCELC-SVQRKGQWDEKFGPSFSS- 255
+ RIWN L+ + +I Q+L DS V E C C S +R + G S
Sbjct: 192 MTTFIRIWNVLNSDPDGPSIHIIKQLLQPDSGVGENCAQCFSSERHSIDTSRLGAVIRSF 251
Query: 256 TLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPT 315
LN++Q +L+C+ +C H++ V+LIWGPPGTGKTKT S LL LL+ +CRTL C PT
Sbjct: 252 DLNDAQEEGVLSCIAARECSHKNTVKLIWGPPGTGKTKTASSLLFALLKRRCRTLTCAPT 311
Query: 316 NVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFE--EIYLNYR 373
NVA+ EL SR ++LV +S + LGDI+LFGN+ R+K++ + I+L+YR
Sbjct: 312 NVAVLELTSRFIRLVMKSLDYLTYG------LGDIVLFGNRKRMKIDNDDDLFVIFLDYR 365
Query: 374 IKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEK-------------LKE------ 414
L +CFAPLSGW+H + LLE+ QYH Y+ LKE
Sbjct: 366 ANILSKCFAPLSGWKHHLELVTYLLENPEKQYHEYLSSDVKRDYEVDNYDCLKEEKELLA 425
Query: 415 -----------------REDCNVNQ---------SEEKECRKETEGSK---GERKPFLKY 445
R C N+ E + C KE SK E+K FL Y
Sbjct: 426 TADQQANQEKKDTYSQDRNVCKQNEWKGIVNKTLRENRLCFKEGNKSKYDKQEKKDFLYY 485
Query: 446 ------------VRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGN 493
V++ F +R CTHLP S+IS + + L F
Sbjct: 486 ENRIKRLTFHEFVKKEFNFIRTQMRTFAVHMCTHLPTSFISLRVVKSLFECLDWLKVFET 545
Query: 494 LLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNL 553
+L +++ + + + S D+ + +Y +L R ECL L++L D L L
Sbjct: 546 VLSNNSITEQGFKLALATSCDDECKISSCNWQY--KLGMTRKECLKRLKSLR---DLLIL 600
Query: 554 PCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQL 613
P + ++ FCFK + + F TASSS +L+S + L LVIDEAAQLKE E+ IPLQL
Sbjct: 601 PDFFDEYSIKSFCFKTSRMIFCTASSSSRLYSEGLDRLEMLVIDEAAQLKECEANIPLQL 660
Query: 614 AGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLF 673
G+ H VLIGDE QLPA+V+S+ISD+AGFGRSLFERL L H KHLLN+QYRMHPSISLF
Sbjct: 661 PGLRHVVLIGDEKQLPALVKSEISDKAGFGRSLFERLVLLGHKKHLLNVQYRMHPSISLF 720
Query: 674 PNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSC-RNIVEVSA 732
PN+QFY NQ++D +VK K+YEK +L+ F ++SFI++ G ++ S RN+VEV+
Sbjct: 721 PNMQFYDNQLVDSPSVKEKNYEKHFLSADMFKSFSFIDVAFGEDELDEGSSRRNMVEVAV 780
Query: 733 VIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG--FEYENKDGFTVKVKSIDGF 790
V I+ LYK V KQ VS+GV+SPY AQVVAI+ + F + DGF+VKV ++DGF
Sbjct: 781 VSGIVLNLYKESVSRKQTVSVGVISPYKAQVVAIQDTLDKRFGGDVNDGFSVKVSTVDGF 840
Query: 791 QGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
QGGEED+IIISTVR N+ G +GFIS QR NV+LTRAR+ L
Sbjct: 841 QGGEEDVIIISTVRHNSMGVVGFISNIQRTNVSLTRARYVL 881
>gi|38346803|emb|CAD41371.2| OSJNBa0088A01.10 [Oryza sativa Japonica Group]
Length = 890
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 358/913 (39%), Positives = 489/913 (53%), Gaps = 100/913 (10%)
Query: 29 HTVFSWSLEDIFSQSFFKDQV------------EKIPESFQSVKQYFGSFVFPLLEETRM 76
+T+FSW+LED+ +Q+ F D+V IP+ F +K Y SF LLEE R
Sbjct: 22 NTIFSWTLEDVMNQNLFADKVPSISFVFSIRLVNAIPDRFSGLKSYLDSFRALLLEEIRA 81
Query: 77 QLRSGLEAM-RRAPYAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILV 135
++ S LE + + + I P G Q + +R TIS+ + GDI+V
Sbjct: 82 EMSSNLETLPNNSSSTKHIQSLVRVPTGLRQCPL----YRVTISDQ-RGACAPCIGDIVV 136
Query: 136 LADFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFF 195
L D P + SDL GR+ V V NR R ++ D +F
Sbjct: 137 LTDTVPRRPSDLASNGRSCCLAHVKDV---------VNRRTFLIRAAKKIGDADSYAFAA 187
Query: 196 IYLTNILPNKRIWNSLH----MCGNWKVITQVLGTDSVVDERCELCSVQR-KGQWDEKFG 250
L +P RIW L + N ++ V G S R G DE
Sbjct: 188 SLLA-FIPYARIWRCLDYDYALKINPPLVMAVAGVALQTTSLAGSSSFHRANGGTDEITS 246
Query: 251 --PSFSSTLNESQVGAMLACLRRLDCGHRSGVE----LIWGPPGTGKTKTVSMLLLTLLR 304
P+F LN+SQ GA+ +C+ + S LIWGPPGTGKTKT+S+LLL L+
Sbjct: 247 RLPAFG--LNDSQAGAIQSCVSAVQGNGASTTSGRFSLIWGPPGTGKTKTISVLLLMLMT 304
Query: 305 I-----KCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRL 359
+ R L C PTN AI+++ASR+L L K+ + + +C GD+LLFGNKDR+
Sbjct: 305 TATSQSRYRVLTCAPTNTAISQVASRLLALSKQ---HSAAAAGGLCH-GDLLLFGNKDRM 360
Query: 360 KVNPGFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCN 419
++ +E++L+ R+K L++CF+P SGWRH SS+ L ++ Y++ +D
Sbjct: 361 GIDGDLKEVFLDNRVKILQKCFSPESGWRHGLSSLQVFLSFPLALRCQYIQACIALKD-- 418
Query: 420 VNQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQ 479
G P +VR RF L C +H+PKS I E ++
Sbjct: 419 -----------------GTALPESSFVRSRFHDICQKLSRCFQTILSHVPKSVILEKNYN 461
Query: 480 EMVALKSLLDSFGNLLFQDNVVSKE-LEKLF-SHSVDEGISWAFVRKRYLLQLHQRRSEC 537
++ L ++L++F LL +++ E L +F +G V + L Q ++
Sbjct: 462 NIILLTTMLENFRKLLSKNSAAGDEVLVGIFMKEKKPDGSDGGVVHSDLVRNLRQSMTQI 521
Query: 538 LSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVID 597
L V+ L L L LP TTS ++ FC + ASL F T S S KL+ + ++ L+ID
Sbjct: 522 LGVISTL---LRGLQLPATTSPFKIKKFCLRSASLIFCTVSGSAKLYE---QKMDLLLID 575
Query: 598 EAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSK 657
EAAQLKE ES IPLQ++G+ HAVLIGDECQLPA V+SK +D A GRSLFERLT L H K
Sbjct: 576 EAAQLKECESLIPLQVSGLKHAVLIGDECQLPATVKSKAADGALLGRSLFERLTLLGHQK 635
Query: 658 HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRE 717
HLLN+QYRMHPSIS+FPN FY +ILDG NV +E+ +L G FG YSFINI GRE
Sbjct: 636 HLLNMQYRMHPSISIFPNFSFYDKKILDGPNVTHVRHERSFLQGAMFGPYSFINIENGRE 695
Query: 718 DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENK 777
D + RN+ EV+A+ KIL L KA VG+ + VS+G++ PY AQV AI+ G +
Sbjct: 696 DPGRNK-RNMAEVAAIKKILHNLCKACVGTGEGVSVGIICPYAAQVEAIQS--GIDANAV 752
Query: 778 DGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSE 837
V+V S+DGFQG EEDIII+STVR N+ GSIGF+S +R NVALTRARHCLWILG
Sbjct: 753 RPLDVRVNSVDGFQGSEEDIIILSTVRSNSTGSIGFLSNRRRANVALTRARHCLWILGDA 812
Query: 838 RTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAESLTSTSQGGKK 897
TL+ S S+WG LV DA R+CF++ D+ G L ++ G +
Sbjct: 813 ATLLGSGSVWGELVRDAVDRRCFYDWDD------------------GGAGLLGVARRGHE 854
Query: 898 EEFE--FEFVKAF 908
+E + EF AF
Sbjct: 855 DELDDAVEFATAF 867
>gi|222629429|gb|EEE61561.1| hypothetical protein OsJ_15909 [Oryza sativa Japonica Group]
Length = 889
Score = 558 bits (1438), Expect = e-155, Method: Compositional matrix adjust.
Identities = 356/912 (39%), Positives = 488/912 (53%), Gaps = 99/912 (10%)
Query: 29 HTVFSWSLEDIFSQSFFKDQV------------EKIPESFQSVKQYFGSFVFPLLEETRM 76
+T+FSW+LED+ +Q+ F D+V IP+ F +K Y SF LLEE R
Sbjct: 22 NTIFSWTLEDVMNQNLFADKVPSISFVFSIRLVNAIPDRFSGLKSYLDSFRALLLEEIRA 81
Query: 77 QLRSGLEAM-RRAPYAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILV 135
++ S LE + + + I P G Q + +R TIS+ + GDI+V
Sbjct: 82 EMSSNLETLPNNSSSTKHIQSLVRVPTGLRQCPL----YRVTISDQ-RGACAPCIGDIVV 136
Query: 136 LADFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFF 195
L D P + SDL GR+ V V NR R ++ D +F
Sbjct: 137 LTDTVPRRPSDLASNGRSCCLAHVKDV---------VNRRTFLIRAAKKIGDADSYAFAA 187
Query: 196 IYLTNILPNKRIWNSLH----MCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFG- 250
L +P RIW L + N ++ V G + G DE
Sbjct: 188 SLLA-FIPYARIWRCLDYDYALKINPPLVMAVAGVALTTSLAGSSSFHRANGGTDEITSR 246
Query: 251 -PSFSSTLNESQVGAMLACLRRLDCGHRSGVE----LIWGPPGTGKTKTVSMLLLTLLRI 305
P+F LN+SQ GA+ +C+ + S LIWGPPGTGKTKT+S+LLL L+
Sbjct: 247 LPAFG--LNDSQAGAIQSCVSAVQGNGASTTSGRFSLIWGPPGTGKTKTISVLLLMLMTT 304
Query: 306 -----KCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLK 360
+ R L C PTN AI+++ASR+L L K+ + + +C GD+LLFGNKDR+
Sbjct: 305 ATSQSRYRVLTCAPTNTAISQVASRLLALSKQ---HSAAAAGGLCH-GDLLLFGNKDRMG 360
Query: 361 VNPGFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNV 420
++ +E++L+ R+K L++CF+P SGWRH SS+ L ++ Y++ +D
Sbjct: 361 IDGDLKEVFLDNRVKILQKCFSPESGWRHGLSSLQVFLSFPLALRCQYIQACIALKD--- 417
Query: 421 NQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQE 480
G P +VR RF L C +H+PKS I E ++
Sbjct: 418 ----------------GTALPESSFVRSRFHDICQKLSRCFQTILSHVPKSVILEKNYNN 461
Query: 481 MVALKSLLDSFGNLLFQDNVVSKE-LEKLF-SHSVDEGISWAFVRKRYLLQLHQRRSECL 538
++ L ++L++F LL +++ E L +F +G V + L Q ++ L
Sbjct: 462 IILLTTMLENFRKLLSKNSAAGDEVLVGIFMKEKKPDGSDGGVVHSDLVRNLRQSMTQIL 521
Query: 539 SVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDE 598
V+ L L L LP TTS ++ FC + ASL F T S S KL+ + ++ L+IDE
Sbjct: 522 GVISTL---LRGLQLPATTSPFKIKKFCLRSASLIFCTVSGSAKLYE---QKMDLLLIDE 575
Query: 599 AAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKH 658
AAQLKE ES IPLQ++G+ HAVLIGDECQLPA V+SK +D A GRSLFERLT L H KH
Sbjct: 576 AAQLKECESLIPLQVSGLKHAVLIGDECQLPATVKSKAADGALLGRSLFERLTLLGHQKH 635
Query: 659 LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRED 718
LLN+QYRMHPSIS+FPN FY +ILDG NV +E+ +L G FG YSFINI GRED
Sbjct: 636 LLNMQYRMHPSISIFPNFSFYDKKILDGPNVTHVRHERSFLQGAMFGPYSFINIENGRED 695
Query: 719 FIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKD 778
+ RN+ EV+A+ KIL L KA VG+ + VS+G++ PY AQV AI+ G +
Sbjct: 696 PGRNK-RNMAEVAAIKKILHNLCKACVGTGEGVSVGIICPYAAQVEAIQS--GIDANAVR 752
Query: 779 GFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSER 838
V+V S+DGFQG EEDIII+STVR N+ GSIGF+S +R NVALTRARHCLWILG
Sbjct: 753 PLDVRVNSVDGFQGSEEDIIILSTVRSNSTGSIGFLSNRRRANVALTRARHCLWILGDAA 812
Query: 839 TLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAESLTSTSQGGKKE 898
TL+ S S+WG LV DA R+CF++ D+ G L ++ G ++
Sbjct: 813 TLLGSGSVWGELVRDAVDRRCFYDWDD------------------GGAGLLGVARRGHED 854
Query: 899 EFE--FEFVKAF 908
E + EF AF
Sbjct: 855 ELDDAVEFATAF 866
>gi|218195424|gb|EEC77851.1| hypothetical protein OsI_17107 [Oryza sativa Indica Group]
Length = 1011
Score = 557 bits (1435), Expect = e-155, Method: Compositional matrix adjust.
Identities = 350/919 (38%), Positives = 502/919 (54%), Gaps = 88/919 (9%)
Query: 17 SSSSKKAVGFAGHTVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRM 76
SS SK A+ + +FSWS+ED+F++ FK +V++IPE+F S YF SF +PLLEET
Sbjct: 37 SSLSKFALSYLVRQIFSWSIEDVFNKELFKQKVKRIPETFTSSSNYFNSFTYPLLEETHA 96
Query: 77 QLRSGLEAMRRAPYAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGK-----EPYKTLPG 131
+ S L+ + V +EL + E ++ ++N K E Y G
Sbjct: 97 DVFSSLDGYSHQNFISVTRMKEL------LHDDESTFFCFEVANPAKDEKSKETYAPCEG 150
Query: 132 DILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVH----- 186
DI+VL KP++VSDL R ++ S+ +D+D+ N + + + + V
Sbjct: 151 DIIVLTSRKPKQVSDLTRNTTSYILGSIVKGGEDDDD-LPGNCFIARLSSVLPVETDFST 209
Query: 187 DKTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWD 246
++ K+ F + L N+ RIW+ LH GN ++ V S L + D
Sbjct: 210 NEPKEPLFAVILINMKTYDRIWDCLHK-GNSHIVDTVWRYKSKFQLPIALTVAFATKEVD 268
Query: 247 EKFGPS------FSS-----------TLNESQVGAMLACLRRLDCGHRSGVELIWGPPGT 289
E S F++ LN SQ+ A+ C+ + S ++LIWGPPGT
Sbjct: 269 EAMSSSSQLSQRFAARSAVDLNLEKYMLNNSQLNAVADCVL-VSEKISSPIKLIWGPPGT 327
Query: 290 GKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGD 349
GKTKT+S LL +L RTL C PTN A+ E+ASR++KLV ES + L +
Sbjct: 328 GKTKTISALLWVMLHSGHRTLTCAPTNTAVLEVASRIVKLVHESPASSGQY------LSN 381
Query: 350 ILLFGNKDRLKV--NPGFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQ-YH 406
I+LFGNK R+K+ + ++L+ R ++L +CF + GW HC S+ID LE V++ Y
Sbjct: 382 IVLFGNKKRMKIGEDHDLSVVFLSSRTERLSQCFESMKGWNHCLCSLIDFLEIPVTKKYK 441
Query: 407 IYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCT 466
Y ++K +G P ++V+++ + + I CT
Sbjct: 442 WYTVQMK------------------MKGPNSVVLPLKEFVKDKCNELLEDFYYFMEILCT 483
Query: 467 HLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLF-----SHSVDEGISWAF 521
P++ SFQ M + L+ L+ ++ L H + + W
Sbjct: 484 DFPRNSTMRQSFQYMNEVVEPLNILHALINVNDDNDDNLWFDDLLNGKGHGDSDPLKWPD 543
Query: 522 VRKRYLL------QLHQRRSECLSVLRNLWNSL-----DELNLPCTTSKLVLEDFCFKRA 570
+ ++ + R C+ +LR L +L D L+L K + + +R
Sbjct: 544 LLASVHTDVCNKSKIRKARLLCVQILRYLKINLKLPDWDRLSLSDDDRKREIRVYLLQRT 603
Query: 571 SLFFSTASSSYKLHSVE-------IKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIG 623
T SSSY LH+V +KPL LV+DEAAQLKE E+ IP+QL GI AV IG
Sbjct: 604 KCILCTVSSSYVLHNVSMDDRSECLKPLELLVVDEAAQLKECETLIPMQLPGIKQAVFIG 663
Query: 624 DECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQI 683
DECQLPA+V+SKISD A FGRS+FERL+SL ++KHLLNIQYRM P IS FP FY +I
Sbjct: 664 DECQLPALVKSKISDNADFGRSVFERLSSLGYNKHLLNIQYRMRPEISKFPVASFYDGKI 723
Query: 684 LDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYH--SCRNIVEVSAVIKILQKLY 741
DG NV SK+Y++ L G FG YSFIN+ GG E H S +N +EV+AV+ I+++L+
Sbjct: 724 SDGPNVVSKNYKRNILPGKMFGPYSFINVDGGHETTEKHGRSLKNTIEVAAVLWIVRRLF 783
Query: 742 KAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIIS 801
+ V K+++GVVSPY AQV AI++KIG Y+ DGF+VKVKS+DGFQG EED+IIIS
Sbjct: 784 EESVFLGSKLTVGVVSPYNAQVRAIQEKIGKTYDMYDGFSVKVKSVDGFQGAEEDVIIIS 843
Query: 802 TVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFF 861
TVR N GS+GF++ QR NVALTRA+HCLWI+G+ TL ++ S+W +V DAK R CFF
Sbjct: 844 TVRSNRAGSVGFLTNLQRTNVALTRAKHCLWIVGNGTTLSNNRSVWQKVVNDAKHRGCFF 903
Query: 862 NADEERNLAKARLEVSKEL 880
A E+++L+ A + EL
Sbjct: 904 EASEDKHLSNAIVNAVIEL 922
>gi|357491663|ref|XP_003616119.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
gi|355517454|gb|AES99077.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
Length = 860
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 347/902 (38%), Positives = 511/902 (56%), Gaps = 107/902 (11%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
V SW LED+ +++ +K +V KIPE+F+S Y SF+ L EETR L S L + RAP
Sbjct: 21 VLSWPLEDVLNENLYKHKVHKIPETFKSATDYKNSFIPLLCEETRTDLSSSLSGVSRAPI 80
Query: 91 AQ---VIAFEEL------KPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKP 141
+ VI ++L K + ++ I++ ++ + G Y+ GD++ + +P
Sbjct: 81 CEIKKVIKSKQLQLPKAQKHFKQFRHKIQLKSTFYSVEDGGD--YEPGSGDLIAFTNIRP 138
Query: 142 EKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQV---HD---KTKKSFFF 195
+ + DL + + V D + + + V + ++ HD + + +
Sbjct: 139 KSLDDLNTLKSPYHIGYV-----DRPKKRFSDMVSVLSSKCLKTDTEHDFGNREEPKLYA 193
Query: 196 IYLTNILPNKRIWNSLHMCG---NWKVITQVLGTDSVVDERCELCSVQRKGQ--WDEKFG 250
+YL N+ N RI N+L+ + +I VLG + E C+ C + Q + ++
Sbjct: 194 VYLMNMTTNLRISNALNSPSEGEHLNIIKTVLGPHLISGENCQNCLSEENCQASFTKEDM 253
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTL 310
S LNESQ A+ + ++C H S V+LIWGPPGTGKTKTV+ LL +LL +K RTL
Sbjct: 254 IIRSQKLNESQEDAVSSSANMINCNH-SNVKLIWGPPGTGKTKTVACLLFSLLELKTRTL 312
Query: 311 ACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKV--NPGFEEI 368
C PTN A+ ++A R+ +LV +S + ++ LGDI+LFGN R+K+ +PG +I
Sbjct: 313 TCAPTNTAVLQVAIRLHRLVMDSLELETYG------LGDIVLFGNSKRMKLSSHPGLVDI 366
Query: 369 YLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKEC 428
+L+ R++ L+ CF GW SMI LL+ +EK R
Sbjct: 367 FLDNRVENLKRCFDSNIGWETNLRSMIRLLKS--------MEKFTLR------------- 405
Query: 429 RKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLL 488
K R F +++F L+ + TH+PKS+IS + ++M+ LL
Sbjct: 406 -------KKYRAVFAFIYKQKFVEQREKLKLLMQTLYTHMPKSFISLETVKKMLQALDLL 458
Query: 489 DSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSL 548
S G IS F Y+ + RR ECL VL +L
Sbjct: 459 RSLG------------------------ISLCF--PAYIQAFYVRRDECLKVLSSLS--- 489
Query: 549 DELNLPC----TTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKE 604
D ++LP ++ + +FC A L F TASSS KL++ E+ P+ FLVIDEAAQLKE
Sbjct: 490 DTISLPKFDKRDNMRVEVGNFCLSNACLIFCTASSSVKLYTAEVSPIQFLVIDEAAQLKE 549
Query: 605 SESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQY 664
ESTIPLQL+G+ + +LIGDE QLPA+V+SKI+D+ FGRS+FERL L + +H+LNIQY
Sbjct: 550 CESTIPLQLSGLRNCILIGDERQLPALVKSKIADKCEFGRSMFERLVILGYKRHMLNIQY 609
Query: 665 RMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIY--H 722
RMHPSISLFP +FY ++ D VK SY K +L G + +YSFINI G+E +
Sbjct: 610 RMHPSISLFPCKEFYDEKLSDAPAVKEVSYNKLFLVGDMYSSYSFINIAKGKEKLGHCGQ 669
Query: 723 SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG-FEYENKDGFT 781
S +N+VEV+ + ++++ L K ++ +K+KVSIG++SPY AQV I++K+ + ++ F+
Sbjct: 670 SLKNMVEVAVISEMIKSLNKVFMRTKKKVSIGIISPYNAQVNEIQEKVKQYTWDTTSDFS 729
Query: 782 VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLI 841
V V+S+DGFQGGEEDIIIISTVR N G++GF+S QR NVA+TRAR+CLWILG+ TLI
Sbjct: 730 VNVRSVDGFQGGEEDIIIISTVRSNGSGNVGFLSNRQRANVAMTRARYCLWILGNAATLI 789
Query: 842 SSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEI----GAESLTSTSQGGKK 897
+S+S+W +V DAK R CF NA E++NLA+A ++ L EI G+ES G+K
Sbjct: 790 NSDSVWRNVVLDAKRRDCFHNAVEDKNLARA---INDVLFEIKLLEGSESPFMKLSLGEK 846
Query: 898 EE 899
E
Sbjct: 847 SE 848
>gi|242076910|ref|XP_002448391.1| hypothetical protein SORBIDRAFT_06g026430 [Sorghum bicolor]
gi|241939574|gb|EES12719.1| hypothetical protein SORBIDRAFT_06g026430 [Sorghum bicolor]
Length = 925
Score = 553 bits (1426), Expect = e-154, Method: Compositional matrix adjust.
Identities = 327/894 (36%), Positives = 499/894 (55%), Gaps = 88/894 (9%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
VFSWS++DIF++ + QV++IP++F S + Y SF PL+EE + S L+ +A +
Sbjct: 51 VFSWSIQDIFNRDLLRHQVKRIPDTFVSFESYLDSFAGPLIEEVHADIFSSLDGYAQANF 110
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRV 150
Q+I E+L +E Y+ DI+VL+ KP+ VSDL +
Sbjct: 111 TQIIKMEKLDGKKFENPVFSFQIAEPVKDEKSRETYEPTECDIIVLSPQKPKHVSDLTQN 170
Query: 151 GRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKS---FFFIYLTNILPNKRI 207
++ V +++D ++ + ++V + K F +Y+ N+ R+
Sbjct: 171 KSSYVLGLVLKSGEEDDFPLNCCIVQLSSATPIEVDAEMKTPKGPLFAVYIMNMTTYNRM 230
Query: 208 WNSLHMCGN-------------------WKVITQVL-GTDSVVDERCELCSVQRKGQWDE 247
W LH+ N W+ + + S + ++ G E
Sbjct: 231 WKCLHLVENDANSLGLRNKKSTELVDKVWQYNPKAVEDGSSSCSQLSQVAHRSTDGLGLE 290
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC 307
KF LN+SQ+ A+ C+ +D H S ++L+WGPPGTGKTKT+S +L +L
Sbjct: 291 KF------NLNDSQLNAVADCVSSMD-DHSSSIKLLWGPPGTGKTKTISTILWAMLIKDR 343
Query: 308 RTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVN--PGF 365
+TLAC PTN A+ E+A+R++KLV +S ++ +C L DI+LFGN++ +KV+
Sbjct: 344 KTLACAPTNTAVLEVAARIVKLVGKS------ADGSLCFLNDIILFGNRNNMKVDDESDL 397
Query: 366 EEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEE 425
++L+ R ++L CF P SGWRHC S+IDL+E+ V+ Y +Y
Sbjct: 398 SSVFLDSRAERLLPCFVPNSGWRHCLCSLIDLIENQVTMYQLY----------------- 440
Query: 426 KECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALK 485
E K +Y+++ + LR CI I P++ + SFQ M +
Sbjct: 441 -----------SEGKTLSQYLKDEYNKHSRKLRGCIEILYNDHPRNAETGRSFQCMSEVL 489
Query: 486 SLLDSFGNLLFQD-----NVVSKELEKLFSHSVDEGISW----AFVRKRYLLQLHQR--R 534
L++ +L+ D ++ S EL ++ + + W A ++ +L R R
Sbjct: 490 ELINIIHDLINDDKDDGHDIWSDELLEIKIEDNGDPLLWPEQLACIQNTSCKKLKFRLAR 549
Query: 535 SECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSV---EIKPL 591
S C+ L L +L+ LP + ++ + RA T SSS++L++V + L
Sbjct: 550 SLCVQELSYLRTNLE---LPNCYNTRAVQQYLLLRAKCILCTVSSSFRLYNVPMGDTNSL 606
Query: 592 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT 651
L++DEAAQLKE E+ IPLQL GI A+LIGDE QLPA V+S IS+ A FGRS+F+RL+
Sbjct: 607 ELLIVDEAAQLKECETLIPLQLPGIRQALLIGDEYQLPAFVKSTISESASFGRSVFQRLS 666
Query: 652 SLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
SL SKHLLN+QYRMHP IS FP FY ++ DG NV K Y K++L+G FG YSFIN
Sbjct: 667 SLGFSKHLLNVQYRMHPDISNFPVATFYDGKVSDGPNVSHKDYNKRFLSGNLFGPYSFIN 726
Query: 712 IIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKK 769
+ GG E H S +N +EV+AV++++Q+L+K V KVS+GVVSPY AQV AI++K
Sbjct: 727 VEGGHETTEKHGRSLKNTIEVAAVVRMVQRLFKEAVSKGSKVSVGVVSPYNAQVRAIQEK 786
Query: 770 IGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+G Y +GF+V VKS+DGFQG EEDIIIISTVR N G++GF++ QR NVALTRA+H
Sbjct: 787 LGKSYTMYNGFSVNVKSVDGFQGAEEDIIIISTVRSNGAGAVGFLTNLQRTNVALTRAKH 846
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEI 883
CLWI+G+ TL S+ ++W ++ +A+ R FF+ +++++L+ A V+K ++E+
Sbjct: 847 CLWIVGNGTTLSSNNTVWQKMIKNARDRGLFFDVNDDKDLSNA---VAKAVIEL 897
>gi|147842150|emb|CAN62644.1| hypothetical protein VITISV_039594 [Vitis vinifera]
Length = 1003
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 321/700 (45%), Positives = 432/700 (61%), Gaps = 68/700 (9%)
Query: 232 ERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGK 291
E C LC E SF LN+SQ A+L+C+ +C H++ ++ IWGPPGTGK
Sbjct: 156 EECALCXSDSVSN-SEPMVSSFD--LNDSQKAAVLSCIAARECHHQNSIKQIWGPPGTGK 212
Query: 292 TKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDIL 351
TKTV+ LL L R+KCRT+ C PTN+A+ + R++ LV++S + + LGDIL
Sbjct: 213 TKTVATLLFALYRMKCRTVTCAPTNIAVLTVTERLVGLVRDSNEYGTYG------LGDIL 266
Query: 352 LFGNKDRLKVNP--GFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIY- 408
LFGN R+K++ +++L++R K L CF+P SGW+H SMI LLED Y Y
Sbjct: 267 LFGNGKRMKIDDHRDLHDVFLDFRXKILANCFSPRSGWKHSLESMICLLEDPKEMYSTYL 326
Query: 409 ---------VEKLKEREDCNVNQSEEKECRKE---------------------------- 431
V+ +E+E+ +QS +K+ RK
Sbjct: 327 RERXNQGKGVQTBQEKEEDIQSQSFBKDGRKNKKSWMRKDIERTLKNSKKGKGKKQQDKN 386
Query: 432 ----TEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSL 487
T+GS + ++ +++F V +L+ CI THLP S I + M+ L
Sbjct: 387 SEGATDGSCDKLLTLEEFFKKKFYDIVNNLKFCIPKLRTHLPTSLIPLEVXKNMIGAHRL 446
Query: 488 LDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNS 547
L+SF L +V SK L+++ D G S + H+ R + L +LR L +
Sbjct: 447 LESFITLFQNVSVESKGLKEVIEKIGDAGKSVD-----RFCKFHKTRRKFLEILRCLRQA 501
Query: 548 LDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESES 607
++ +P TT ++ FC + A+L F TASSS K+ V KP+ LVIDEAAQLKE ES
Sbjct: 502 IE---VPNTTDHYRIKSFCLQNATLLFCTASSSAKI-PVGGKPIELLVIDEAAQLKECES 557
Query: 608 TIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMH 667
IPLQ++GI HA+LIGDE QLPAMV+SKIS+EA FGRSLF+RL L H KHLLN+QYRMH
Sbjct: 558 AIPLQISGIRHAILIGDELQLPAMVKSKISEEAKFGRSLFQRLVLLGHRKHLLNLQYRMH 617
Query: 668 PSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIY-HSCRN 726
PSISLFPN +FY N ILD NVK + YE+ YL G +G+YSFIN+ G+E+F Y +S RN
Sbjct: 618 PSISLFPNREFYDNLILDAPNVKERKYERSYLHGNMYGSYSFINVAYGKEEFDYRYSTRN 677
Query: 727 IVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEY-ENKDG-FTVKV 784
+VEV V +++ L KA G KQ+VS+G++SPY AQV AI+ ++G +Y + DG F+V V
Sbjct: 678 MVEVVVVSEMVATLAKATKGRKQRVSVGIISPYKAQVYAIQDRLGKKYTSSADGKFSVSV 737
Query: 785 KSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSE 844
+S+DGFQGGEEDIIIISTVRCN GS+GFIS QR NVALTRAR+CLWI G+ TL S
Sbjct: 738 RSVDGFQGGEEDIIIISTVRCNLKGSVGFISNRQRTNVALTRARYCLWIFGNGPTLEHSG 797
Query: 845 SIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIG 884
++WG LV DAK R CF NA+E+ NLA+A ++ LVE+G
Sbjct: 798 TVWGKLVNDAKDRGCFHNAEEDNNLARA---ITTSLVELG 834
Score = 105 bits (261), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 92/160 (57%), Gaps = 6/160 (3%)
Query: 11 MEGKGCSSSSKKAVGFAGHTVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPL 70
ME K C + G VFSWSL+DI +++ +KD+V+ IP++F SV Y SF++PL
Sbjct: 1 MERKRCKKAETAPKDLMG-LVFSWSLKDILNKNLYKDKVKMIPDTFLSVSHYLTSFIYPL 59
Query: 71 LEETRMQLRSGLEAMRRAPYAQVIAFEELKPY--GTN-QYGIEVDYWRNTISNSGKEPYK 127
+EET L S + + +AP ++++ E K Y TN +Y I V RN +++ E Y+
Sbjct: 60 IEETHADLLSSMTMVSQAPLCEILSVETTKDYEPPTNLKYKITVKGIRNNGNDA--EIYE 117
Query: 128 TLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDED 167
GD++ L D +P+ +SDL R R++ SV P E+
Sbjct: 118 PETGDLIALIDVRPKCISDLNRPKRSYIVASVVAKPAGEE 157
>gi|225462691|ref|XP_002267110.1| PREDICTED: uncharacterized protein LOC100257019 [Vitis vinifera]
Length = 1143
Score = 550 bits (1418), Expect = e-153, Method: Compositional matrix adjust.
Identities = 354/905 (39%), Positives = 500/905 (55%), Gaps = 85/905 (9%)
Query: 22 KAVGFAGHTVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSG 81
K+ G H VFSWSL D+ +Q+ +KD+V IP+ F S + Y GSF+ L+EETR L S
Sbjct: 107 KSTGLIDH-VFSWSLNDVQNQALYKDKVSPIPDKFSSRRHYMGSFIVSLIEETRADLSSS 165
Query: 82 LEAM-----------RRAPYAQVIAFEELKPY-GTNQYGIE----VDYWRNTISNSGK-- 123
+ P + A EL ++Q+ + D ++ +G
Sbjct: 166 IRTACEASESESESSTWEPTSVDTAARELMSIEKSSQFKLPRYFLYDVSLKSVEGNGNNA 225
Query: 124 EPYKTLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNM 183
E Y+ GDI+ L D P + + VT + + K +
Sbjct: 226 EVYEPQAGDIIALTDKIPYYIES----ESCYNIALVTGSYGKTSDKLQIQSPKPMMHEQI 281
Query: 184 QVHDKTKKSFFFIYLTNILPNKRIWNSLHMC---GNWKVITQVLGTDSVVDERCELCSVQ 240
+K +++ + +YL NI N IW +LH GN ++I +VL TDS C LCS
Sbjct: 282 MSDNKKRRTIYAVYLINITTNNCIWEALHRSPHGGNIRIIDKVLQTDSSAGRGCALCSSG 341
Query: 241 R---KGQWD-EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVS 296
K D E SF LN SQ A+L+C+ C H + V+LI GPPGTGKTKTV+
Sbjct: 342 SEAFKSVTDLEDRIRSFG--LNLSQEEAVLSCISAAMCHHENSVKLIKGPPGTGKTKTVA 399
Query: 297 MLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNK 356
LL +L++KCRTLAC PTN A+ R+L VK S + + +GDI+LFG+
Sbjct: 400 SLLFAVLKMKCRTLACAPTNTAVLLATERLLSFVKGSLENGTYG------MGDIVLFGST 453
Query: 357 DRLKVNPGFEE---IYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLK 413
++++ +E I+L+ R L CFA SGW+H SMI LL++ Y++ L
Sbjct: 454 RGMQIDDCDDELHDIFLDSRANILARCFAQGSGWKHSLESMITLLQNLEGNYNLC---LG 510
Query: 414 EREDCN---------------VNQSEE--KECRKETEGSKGERKPFL--KYVRERFKCAV 454
RED +++ EE K+ + + S GE F + ERF
Sbjct: 511 NREDEGNEEQGKQGKLGKGIFIDEKEEIDKKNFQSLKFSGGECDDFFISQDFVERFDLVH 570
Query: 455 VSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVD 514
L+ THLP S I + + MV +LL + +LL + + ++L+K D
Sbjct: 571 GQLKVYTVNLYTHLPTSMIPLDVMKNMVRALNLLKNLSDLL---HSIEEDLDKF----ED 623
Query: 515 EGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFF 574
+G R R L L +R CL LR+L ++P ++ ++ C K A L F
Sbjct: 624 KG-----KRIRRLPDLQRRTEVCLQTLRSLGKMF---SVPTLANEYKIKSLCLKNAVLIF 675
Query: 575 STASSSYKL-HSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVE 633
T SSS KL H ++K + LVIDEAAQLKE ESTIPLQ++GI HAVL+GDE QLPA+V+
Sbjct: 676 CTVSSSSKLLHIKDMKGIELLVIDEAAQLKECESTIPLQISGIRHAVLVGDEMQLPALVK 735
Query: 634 SKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKS 693
SK + F RSLFERL SL H KHLL++QYRMHPSISLFPN +FY I++ VK
Sbjct: 736 SKELENTKFERSLFERLVSLRHYKHLLDVQYRMHPSISLFPNNEFYEGDIINAPKVKEAI 795
Query: 694 YEKQYLTGTEFGTYSFINI---IGGREDF-IYHSCRNIVEVSAVIKILQKLYKAWVGSKQ 749
Y +++L G +G +SFIN+ + E+F + HS +N+VEV+ V +I+ L++ K+
Sbjct: 796 YSRRFLHGNMYGPFSFINVASTVPELEEFNVRHSSKNMVEVAVVSQIIASLFEETKARKE 855
Query: 750 KVSIGVVSPYTAQVVAIRKKIGFEY--ENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT 807
KVS+G++SPY AQV I+KK+G Y + + F++KV ++DGFQG EED+IIISTVRCN+
Sbjct: 856 KVSVGIISPYKAQVHEIQKKLGKAYSTDAESQFSIKVSTVDGFQGDEEDVIIISTVRCNS 915
Query: 808 GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEER 867
GG IGF+ +R NV+LTRARHCLWI G+ +TL S S+W +V AK ++CF+NA E+
Sbjct: 916 GGHIGFVKNYRRANVSLTRARHCLWITGNAKTLEDSHSVWEKVVQHAKGQRCFYNAYEDT 975
Query: 868 NLAKA 872
NLAKA
Sbjct: 976 NLAKA 980
>gi|414591179|tpg|DAA41750.1| TPA: hypothetical protein ZEAMMB73_134729 [Zea mays]
Length = 1030
Score = 548 bits (1411), Expect = e-152, Method: Compositional matrix adjust.
Identities = 343/913 (37%), Positives = 509/913 (55%), Gaps = 90/913 (9%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
+FSWS++D+F++ K QV +IP++F + Y SF PL+EE + L A +
Sbjct: 116 IFSWSIQDVFNKDLLKQQVRRIPDTFMLLNAYLDSFTGPLIEEVHCDVFLSLSGYAHANF 175
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRV 150
+++ ++L + + YG V + +E Y GDI+V++ KP+ VSDL +
Sbjct: 176 IEIVRLDKLN-HEKSIYGFVVSM--PSKDAKSREIYAPKEGDIVVVSLQKPKHVSDLTKN 232
Query: 151 GRTWTFVSV--TTVPDDEDENKKENRYKVKARNNMQVH-----DKTKKSFFFIYLTNILP 203
++ S+ + ++ED + N V+ + + V K + F ++L N
Sbjct: 233 RSSYNLGSILKSGKEEEEDSDLPPNFCIVRFLSAIPVEVDPETSKPRGPCFAVFLINTTT 292
Query: 204 NKRIWNSLHMCGNWKVIT--QVLGTDSVVDERCELCSVQRKGQWD--------------- 246
IW LH+ N + Q G+++ + + +R+ D
Sbjct: 293 YDHIWTCLHLVANDHNLAPLQKRGSNTAIVNL--VWQYKRRAAEDGSLSFSQLSQSVTQS 350
Query: 247 ------EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLL 300
EKFG LN+SQ+ A+ C+ ++LIWGPPGTGKTKT+ +L
Sbjct: 351 VDDLGLEKFG------LNDSQLHAVADCVLSAIDNRLPSLKLIWGPPGTGKTKTICTILW 404
Query: 301 TLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLK 360
+L RTL C PTN A+ E+ASR+++LV+ + +C L DI+LFG+K+++K
Sbjct: 405 AMLMKGLRTLTCAPTNTAVLEVASRIVRLVEHLHGS-------VCFLNDIVLFGSKEKMK 457
Query: 361 VN--PGFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDC 418
+ ++L+ R K+L CF P +GW HC S++D LE ++QY +++EKL + E
Sbjct: 458 IGREDALSMVFLDSRAKRLLPCFMPTTGWMHCLRSLMDHLESPITQYRLHLEKLLKNE-- 515
Query: 419 NVNQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSF 478
+ K + T+G+ PF + + F LR C+ P+S + +SF
Sbjct: 516 -KKKESNKGGSRATQGTIIRIPPFKDFFKGYFNKVSNLLRKCVETMYNDHPRSPETGHSF 574
Query: 479 QEMVALKSLLDSFGNLLF--QDNVVSKELEKLFSHSVDEGISW----AFVR----KRYLL 528
Q M+ + L+ L+ D++ S E + I W A VR K++ L
Sbjct: 575 QCMLEVLELIGILQELINCKNDDIWSDEFHDCKIEDDGDPILWSEQLAHVRSNTSKKHKL 634
Query: 529 QLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEI 588
+L RS C+ LR L +L+ LP +SK +E + +RA T SSS++L++V +
Sbjct: 635 KL--ARSLCVRELRYLHKNLE---LPGYSSKRSVETYLLQRAKCILCTVSSSFRLYNVPM 689
Query: 589 -----------------KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAM 631
K L+ L++DEAAQLKE E+ IPLQL GI AV +GDE QLPA+
Sbjct: 690 DSSCTDIHSLLKGPETFKLLDMLIVDEAAQLKECETLIPLQLPGIRQAVFVGDEYQLPAL 749
Query: 632 VESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKS 691
V SKISD A FGRS+FERL+SL + K+LLN+QYRMHP IS FP FY ++ DG NV S
Sbjct: 750 VRSKISDGANFGRSVFERLSSLGYGKYLLNVQYRMHPEISRFPVATFYDGKLSDGPNVTS 809
Query: 692 KSYEKQYLTGTEFGTYSFINIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQ 749
SYE+ +L FG YSFIN+ GGRE H S +N VEV+AV++I+Q+L+K V +
Sbjct: 810 MSYERTFLASKVFGPYSFINVDGGRETTEKHGTSLKNTVEVAAVLRIVQRLFKESVSTGC 869
Query: 750 KVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGG 809
K+S+GVVSPY AQV AI +K+G Y DGF+VKVKS+DGFQG EED++IISTVR N G
Sbjct: 870 KLSVGVVSPYNAQVRAICQKVGESYNAHDGFSVKVKSVDGFQGAEEDVLIISTVRSNGAG 929
Query: 810 SIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNL 869
S+GF++ QR NVALTRA+HCLWI+G+ TL SS+S+W +V DA+ R C+F A ++ +L
Sbjct: 930 SVGFLTNLQRTNVALTRAKHCLWIVGNGATLSSSKSVWQKIVKDARDRGCYFEASDDGDL 989
Query: 870 AKARLEVSKELVE 882
+ A V K ++E
Sbjct: 990 SNA---VVKAIIE 999
>gi|356537819|ref|XP_003537422.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
[Glycine max]
Length = 925
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 356/895 (39%), Positives = 499/895 (55%), Gaps = 89/895 (9%)
Query: 30 TVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAP 89
TVF+WSL+D+ + + K +V KIP++F S Y SF+ L+EETR L S L+ + RA
Sbjct: 19 TVFNWSLKDVLNDNLCKHKVLKIPQTFLSTTDYLNSFIPSLIEETRSDLCSNLKGVSRAS 78
Query: 90 YAQVIAFE-----ELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKV 144
+ ++ + E P + Y I V+ N ++ GK Y+ GD++ D KP+ V
Sbjct: 79 FCEISSIELERSRSFIPTKSLFYQISVNRSSNDVN--GK--YEPEVGDLIAFTDIKPKTV 134
Query: 145 SDL-RRVGRTWTFVSVTTVPDDEDENK--KENRYKVKARNNMQVHDKTKKSFFFIYLTNI 201
DL R R + V + + D+ + + + ++ K + F +L N+
Sbjct: 135 DDLINRPKRNYHIGYVHGIKESIDKISILSSKSFDMDIQFALRSKSDAPKLYAF-HLLNL 193
Query: 202 LPNKRIWNSLHM---CGNWKVITQVLGTDSVVDERCELC-----------SVQRKGQWDE 247
N RIW +L + ++ +VL D E C+LC SVQ +
Sbjct: 194 TTNVRIWKALKSQLEGASLSMMKKVLQADINNGENCQLCFSGENHSVACSSVQNIIR--- 250
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC 307
S LN+SQ A+++C+ +C H ++LIWGPPGTGKTKTV+ LL +LL++K
Sbjct: 251 ------SQNLNQSQKEAVVSCVTSRECHHNDTIKLIWGPPGTGKTKTVASLLFSLLKLKA 304
Query: 308 RTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNP--GF 365
RTLAC PTN A+ E+A+R+ LV E+ + D+ GDI++FGNK R+KV+
Sbjct: 305 RTLACAPTNTAVLEVAARLQNLVMETLECDTFG------FGDIVVFGNKSRMKVDSYRCL 358
Query: 366 EEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEK-------------- 411
+++L+YR+ L +C SGW+H SMI L+E QY Y +
Sbjct: 359 NDVFLDYRVDNLLKC----SGWKHSLESMIKLIEYPKQQYDSYKREEENSLKSLEEFAKQ 414
Query: 412 --LKEREDCNVNQSE----EKECRKE-----TEGSKGERKPFLKYVRERFKCAVVSLRNC 460
E+ D ++ + E C +E + + K +Y +R + L
Sbjct: 415 KYFNEKHDDHLTLEQFLKKESTCIEEQYLLYKDHKRKNIKTMEQYFMQRLRSNREQLEEY 474
Query: 461 IFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWA 520
+ THLP S I ++M LL S N L +D K S ++G S
Sbjct: 475 MRTLHTHLPTSLIPLEEIKKMPVALDLLSSLENSLSKDKF------KQTSDGCEDGESIL 528
Query: 521 FVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSS 580
L +L + ECL LR+L ++ +LP T K + FC A L F TA+SS
Sbjct: 529 DC----LGRLSIKNEECLVKLRSLSQTI---SLPNITDKYEMAKFCLMSARLIFCTAASS 581
Query: 581 YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEA 640
KL + + P+ FLVIDEAAQLKE ESTIPLQL G++H +LIGDE QLPA+V+S++S EA
Sbjct: 582 TKLFADGMTPVEFLVIDEAAQLKECESTIPLQLPGLHHVILIGDEKQLPAVVKSQVSQEA 641
Query: 641 GFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLT 700
+GRSLFERL SL H KHLLN+QYRMHPSISLFPN +FY Q+ D V+ SY + +L
Sbjct: 642 EYGRSLFERLVSLGHKKHLLNVQYRMHPSISLFPNKEFYEKQLSDSPFVREVSYNRHFLE 701
Query: 701 GTEFGTYSFINIIGGREDFIY--HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSP 758
G + +YSFINI G+E H +N+VE +AV KI++ L + + +KVSIG++SP
Sbjct: 702 GKMYDSYSFINIAKGKEKMPRGGHGWKNMVEAAAVCKIIESLENEFFSTGKKVSIGIISP 761
Query: 759 YTAQVVAIRKKIGFEYENKD-GFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKP 817
Y AQV I+++I + D F+V V+S+DGFQGGEEDIIIISTVR N G IGF+
Sbjct: 762 YNAQVYEIQERITRQNLVSDPNFSVSVRSVDGFQGGEEDIIIISTVRSNKNGKIGFLDNR 821
Query: 818 QRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKA 872
QR NVALTRAR+CLWILG+E TL S S+W LV DAK R CF NAD+++ LAKA
Sbjct: 822 QRANVALTRARYCLWILGNENTLSSDYSLWRNLVNDAKERGCFHNADDDKKLAKA 876
>gi|15218803|ref|NP_176754.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
gi|332196301|gb|AEE34422.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
Length = 1065
Score = 541 bits (1395), Expect = e-150, Method: Compositional matrix adjust.
Identities = 341/869 (39%), Positives = 487/869 (56%), Gaps = 60/869 (6%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
V SWSL+++ + +K QVEKIP F+S YF +F+ PL+EET L S + + +AP
Sbjct: 15 VLSWSLDEVLNVDLYKGQVEKIPMEFESTGDYFKTFIPPLIEETHAALLSSMRKLWQAPV 74
Query: 91 AQVIAFEELKPYGTNQYGIEVD-YWRNTISN-SGKEPYKTLPGDILVLADFKPEKVSDLR 148
++ + T +Y + D +++ +S S + K +P D++ L D +P V
Sbjct: 75 VEISYIMQ-----TAEYKLPNDLFYKVRLSGISNEASTKLMPRDLISLTDQRPNHVDGFN 129
Query: 149 RVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHD------KTKKSFFFIYLTNIL 202
+ V V D + N + A + V D + K+ F I+L N+
Sbjct: 130 ISSEPYIVALVCKVDPD-----RPNDVTILASKPLFVEDGRRKKNEKKERLFGIHLVNLT 184
Query: 203 PNKRIWNSLHMCG---NWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNE 259
N RIWN+LH N +I++VL +S + C +Q + + P LN
Sbjct: 185 TNIRIWNALHPGDEGVNLNLISRVLRRNSEDEGFC----IQCLQEGSDGLAPRRFLKLNP 240
Query: 260 SQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAI 319
SQ A+L CL C H + V LIWGPPGTGKTKT S+LL TLL KCRTL C PTNV++
Sbjct: 241 SQEDAILNCLDVRRCYHANTVRLIWGPPGTGKTKTTSVLLFTLLNAKCRTLTCGPTNVSV 300
Query: 320 TELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVN--PGFEEIYLNYRIKKL 377
E+ASRVLKLV S K + LGD++LFGN +R+K+ I+++ R+ KL
Sbjct: 301 LEVASRVLKLVSGSLKIGNYG------LGDVVLFGNDERMKIKDRKDLVNIFIDERVDKL 354
Query: 378 RECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKL------KEREDCNVNQSEEKECRKE 431
CF P GW+ MI LLED QY++Y+E L K ++ +V + + E +
Sbjct: 355 YPCFMPFYGWKATIDGMIRLLEDPKGQYNLYLENLARANNVKRKDTGSVFKRKGNEQNEN 414
Query: 432 TEGSKGERKP--FLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLD 489
+ +P F Y+ E+F L CTHLP + +S + M L+
Sbjct: 415 IVEQVSDTRPQSFQDYLPEKFSELRKDLDLHFSSLCTHLPTALLSSQAATRMYEAIDLVR 474
Query: 490 SFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLD 549
L D V + ++ + + EG R+ Q + L +LR S+
Sbjct: 475 DVTILAILDGVTGEGVKSVLIPN-GEG------SDRFSSQHVTVEDDYLKLLR----SIP 523
Query: 550 EL-NLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESEST 608
E+ LP + + ++++ C A L FSTAS S +L++ P+ LVIDEAAQLKE ES+
Sbjct: 524 EIFPLPAVSDRHLIKELCLGHACLLFSTASCSARLYTG--TPIQLLVIDEAAQLKECESS 581
Query: 609 IPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHP 668
IP+QL G+ H +L+GDE QLPAMVES+I+ EAGFGRSLFERL L H K++LNIQYRMH
Sbjct: 582 IPMQLPGLRHLILVGDERQLPAMVESQIALEAGFGRSLFERLALLGHKKYMLNIQYRMHC 641
Query: 669 SISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII---GGREDFIYHSCR 725
SIS FPN + Y +ILD V+ ++Y KQYL G +G YSFINI + S +
Sbjct: 642 SISSFPNKELYGKKILDAPTVRQRNYTKQYLPGEMYGPYSFINIAYGREEYGEGEGRSLK 701
Query: 726 NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDG--FTVK 783
N VEV V I+ L + +K ++++GV+SPY AQV+AI++KI G F+++
Sbjct: 702 NNVEVVVVAAIIANLLQVSEKTKTRINVGVISPYKAQVIAIQEKIQETSIGDAGGLFSLR 761
Query: 784 VKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISS 843
++++DGFQGGEEDIII+STVR N G +GF+ +R NV LTRAR CLWILG+E TL++S
Sbjct: 762 IRTVDGFQGGEEDIIIVSTVRSNGVGRVGFLGNRRRTNVLLTRARFCLWILGNEATLMNS 821
Query: 844 ESIWGALVCDAKARQCFFNADEERNLAKA 872
+S+W L+ DAK R CF +A E+ +LA+A
Sbjct: 822 KSVWRNLIQDAKERGCFHSAGEDESLAQA 850
>gi|6686403|gb|AAF23837.1|AC007234_9 F1E22.14 [Arabidopsis thaliana]
Length = 1076
Score = 540 bits (1392), Expect = e-150, Method: Compositional matrix adjust.
Identities = 341/869 (39%), Positives = 487/869 (56%), Gaps = 60/869 (6%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
V SWSL+++ + +K QVEKIP F+S YF +F+ PL+EET L S + + +AP
Sbjct: 15 VLSWSLDEVLNVDLYKGQVEKIPMEFESTGDYFKTFIPPLIEETHAALLSSMRKLWQAPV 74
Query: 91 AQVIAFEELKPYGTNQYGIEVD-YWRNTISN-SGKEPYKTLPGDILVLADFKPEKVSDLR 148
++ + T +Y + D +++ +S S + K +P D++ L D +P V
Sbjct: 75 VEISYIMQ-----TAEYKLPNDLFYKVRLSGISNEASTKLMPRDLISLTDQRPNHVDGFN 129
Query: 149 RVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHD------KTKKSFFFIYLTNIL 202
+ V V D + N + A + V D + K+ F I+L N+
Sbjct: 130 ISSEPYIVALVCKVDPD-----RPNDVTILASKPLFVEDGRRKKNEKKERLFGIHLVNLT 184
Query: 203 PNKRIWNSLHMCG---NWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNE 259
N RIWN+LH N +I++VL +S + C +Q + + P LN
Sbjct: 185 TNIRIWNALHPGDEGVNLNLISRVLRRNSEDEGFC----IQCLQEGSDGLAPRRFLKLNP 240
Query: 260 SQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAI 319
SQ A+L CL C H + V LIWGPPGTGKTKT S+LL TLL KCRTL C PTNV++
Sbjct: 241 SQEDAILNCLDVRRCYHANTVRLIWGPPGTGKTKTTSVLLFTLLNAKCRTLTCGPTNVSV 300
Query: 320 TELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVN--PGFEEIYLNYRIKKL 377
E+ASRVLKLV S K + LGD++LFGN +R+K+ I+++ R+ KL
Sbjct: 301 LEVASRVLKLVSGSLKIGNYG------LGDVVLFGNDERMKIKDRKDLVNIFIDERVDKL 354
Query: 378 RECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKL------KEREDCNVNQSEEKECRKE 431
CF P GW+ MI LLED QY++Y+E L K ++ +V + + E +
Sbjct: 355 YPCFMPFYGWKATIDGMIRLLEDPKGQYNLYLENLARANNVKRKDTGSVFKRKGNEQNEN 414
Query: 432 TEGSKGERKP--FLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLD 489
+ +P F Y+ E+F L CTHLP + +S + M L+
Sbjct: 415 IVEQVSDTRPQSFQDYLPEKFSELRKDLDLHFSSLCTHLPTALLSSQAATRMYEAIDLVR 474
Query: 490 SFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLD 549
L D V + ++ + + EG R+ Q + L +LR S+
Sbjct: 475 DVTILAILDGVTGEGVKSVLIPN-GEG------SDRFSSQHVTVEDDYLKLLR----SIP 523
Query: 550 EL-NLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESEST 608
E+ LP + + ++++ C A L FSTAS S +L++ P+ LVIDEAAQLKE ES+
Sbjct: 524 EIFPLPAVSDRHLIKELCLGHACLLFSTASCSARLYTG--TPIQLLVIDEAAQLKECESS 581
Query: 609 IPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHP 668
IP+QL G+ H +L+GDE QLPAMVES+I+ EAGFGRSLFERL L H K++LNIQYRMH
Sbjct: 582 IPMQLPGLRHLILVGDERQLPAMVESQIALEAGFGRSLFERLALLGHKKYMLNIQYRMHC 641
Query: 669 SISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII---GGREDFIYHSCR 725
SIS FPN + Y +ILD V+ ++Y KQYL G +G YSFINI + S +
Sbjct: 642 SISSFPNKELYGKKILDAPTVRQRNYTKQYLPGEMYGPYSFINIAYGREEYGEGEGRSLK 701
Query: 726 NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDG--FTVK 783
N VEV V I+ L + +K ++++GV+SPY AQV+AI++KI G F+++
Sbjct: 702 NNVEVVVVAAIIANLLQVSEKTKTRINVGVISPYKAQVIAIQEKIQETSIGDAGGLFSLR 761
Query: 784 VKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISS 843
++++DGFQGGEEDIII+STVR N G +GF+ +R NV LTRAR CLWILG+E TL++S
Sbjct: 762 IRTVDGFQGGEEDIIIVSTVRSNGVGRVGFLGNRRRTNVLLTRARFCLWILGNEATLMNS 821
Query: 844 ESIWGALVCDAKARQCFFNADEERNLAKA 872
+S+W L+ DAK R CF +A E+ +LA+A
Sbjct: 822 KSVWRNLIQDAKERGCFHSAGEDESLAQA 850
>gi|357168352|ref|XP_003581605.1| PREDICTED: probable helicase senataxin-like [Brachypodium
distachyon]
Length = 787
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 323/865 (37%), Positives = 466/865 (53%), Gaps = 117/865 (13%)
Query: 28 GHTVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRR 87
G V SWSL++I ++ +VE IP +F S+ QY S+ PL+EETR L S LE +
Sbjct: 7 GDMVLSWSLQEIMDDDLYRGKVETIPCNFNSLDQYLNSYRAPLIEETRSDLCSCLELISE 66
Query: 88 APYAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDL 147
AP +++++ E G Y ++VD+W N S E Y GDI +L+ KPE D
Sbjct: 67 APSSKILSMEVAGKSGL--YFMDVDFWDNGAGFS-TETYTARNGDIFILSSMKPEAAEDF 123
Query: 148 RRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRI 207
R G T++ VT V D++ K ++VK ++ + + K I+L NI+ N RI
Sbjct: 124 NRYGVTYSLAIVTEVSLDDEYQKG---FRVKVAKDIGLEEDLNKLRHAIFLNNIMTNIRI 180
Query: 208 WNSL----HMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSF-SSTLNESQV 262
W +L HM N+ D+ C +C V+ G F S LN SQV
Sbjct: 181 WKALSFDTHMDNNF-----------TSDDICGIC-VKHDGDCLTSFTEQLLSINLNRSQV 228
Query: 263 GAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITEL 322
A+ + + + C H +LIWGPPGTGKTKTVS LL L +KCRTL C PTNVA+ +
Sbjct: 229 DAIESVISAIRCRHMDHTKLIWGPPGTGKTKTVSALLWVLACLKCRTLTCAPTNVAVVGV 288
Query: 323 ASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFA 382
+R L+ +K+ + S+ P PLGD+LLFGNK + + E+++L++R+ L E F+
Sbjct: 289 CARFLQNLKDFNEHIDESSQPF-PLGDVLLFGNKSNMDITEDLEDVFLDFRVDVLVESFS 347
Query: 383 PLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPF 442
LSGW++ +S+I L EDC SQY + +E + K +
Sbjct: 348 LLSGWKYRIASVISLFEDCASQYDMLLE----------------------DDGKSDPVCL 385
Query: 443 LKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVS 502
L +++++F ++L+ CI HLP + +++ ++L+ FG LL ++
Sbjct: 386 LDFIKKQFDVTSLALKRCIMNLWIHLPGRCFPRDKVSKLL---NMLEKFGVLLCDADLTD 442
Query: 503 KELEK-LFSHSVDEGI---SWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTS 558
+ L++ L S + + +F+ K +L R CL +L++L +SL NLP
Sbjct: 443 ESLKRGLGCLSTENSVCVQPMSFIEK----ELGGARFTCLKLLKDLQHSL---NLPTGVD 495
Query: 559 KLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINH 618
K+ ++ +C + A+L F T SSSY+LH +EI PL+ L++DEAAQ++E E IPL+L + H
Sbjct: 496 KMWVQSYCMRNATLLFCTTSSSYRLHHMEIAPLDVLIVDEAAQVRECELVIPLRLHWLKH 555
Query: 619 AVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQF 678
VL+GD+CQL AMV+S++ EAGFG SLF RL LN K+LLNIQYRMHP IS FPN QF
Sbjct: 556 VVLVGDDCQLSAMVKSQVCKEAGFGTSLFGRLVLLNFEKYLLNIQYRMHPCISSFPNAQF 615
Query: 679 YRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQ 738
Y +ILD K+ G G S Y S +V A+ + L
Sbjct: 616 YERKILDA--------RKRTGQGLSIGVVS-----------PYSS-----QVDAIKRRLD 651
Query: 739 KLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDII 798
K Y+ DGF V+VKSIDGFQG E+DII
Sbjct: 652 K---------------------------------TYDKCDGFHVRVKSIDGFQGEEDDII 678
Query: 799 IISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQ 858
I+STVR N G +GF++ QR NVALTRARHCLWI+G TL S ++W LV DA+ R+
Sbjct: 679 ILSTVRSNGSGVVGFLADYQRTNVALTRARHCLWIVGHAHTLYKSGTVWTDLVADAQRRK 738
Query: 859 CFFNADEERNLAKARLEVSKELVEI 883
C F+A ++ + K L+V +EL E+
Sbjct: 739 CVFSATDDSAMCKLVLKVKQELDEL 763
>gi|414867534|tpg|DAA46091.1| TPA: hypothetical protein ZEAMMB73_362679 [Zea mays]
Length = 1444
Score = 535 bits (1377), Expect = e-148, Method: Compositional matrix adjust.
Identities = 303/730 (41%), Positives = 441/730 (60%), Gaps = 50/730 (6%)
Query: 166 EDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWNSLH--MCGNWKVITQV 223
++ +K E R V RN + + + SF+ +YLTN++ R+W L + + K+I +
Sbjct: 255 KESHKVEKRSDVHGRNEKETGESKRWSFYAMYLTNMVTYDRVWVVLRRGLTMDSKIIHSM 314
Query: 224 LGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELI 283
LG ++ C+ C + DE G LN+SQ+ A+ +C+ +C HRS + L+
Sbjct: 315 LGRNNYALGHCKHCVNKSH---DEIKGDLCDFKLNDSQLDAVASCILASECTHRSSMGLV 371
Query: 284 WGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTP 343
WGPPGTGKT TV+++L LL + RTLAC PTN+A+ ++ASR+L+L+ + R + S
Sbjct: 372 WGPPGTGKTTTVAVMLQMLLMKEQRTLACAPTNMAVLQVASRLLELIGDFSLRHNYS--- 428
Query: 344 ICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVS 403
LGDI+LFGNKDRL++ EIYL+ R++KL F GW+HC S++ L++C S
Sbjct: 429 ---LGDIILFGNKDRLQIGKLLSEIYLDDRVQKLLSSFNRQHGWKHCVDSVVTFLKNCNS 485
Query: 404 QYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFI 463
+Y + V+ Q + R T F KY RF L CI
Sbjct: 486 RYRMSVDI----------QQGSSDARDLT---------FKKYFTSRFSTLADGLVRCIDT 526
Query: 464 FCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLF-----------SHS 512
F HLP+S + +N F +M+ +K LLD L D+V + L +F SH
Sbjct: 527 FYDHLPRSSLGKN-FDKMMFVKRLLDKLQQSLSADDVSDELLFTIFNPADEVPDSSGSHD 585
Query: 513 VDEGISWAFVRKRYLLQLH-QRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRAS 571
F + L +S C+ +L +L N + LPC ++L + D C K A
Sbjct: 586 DLIDDEDDFHDCKISLDSPLDIKSLCIKILMSLSN----MRLPCEDNELSIRDLCLKHAK 641
Query: 572 LFFSTASSSYKLHSVE-IKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPA 630
L F TASSS++L ++ ++P++ LVIDEAAQLKE ES +PL L GI H +LIGDE QL +
Sbjct: 642 LIFCTASSSFELFRLQSVRPISILVIDEAAQLKECESLVPLLLQGIEHVLLIGDENQLSS 701
Query: 631 MVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVK 690
+V+SKI+ +A FGRSL++RL ++ +SKHLL +QYRMHPSIS FPN FY N+I DG V+
Sbjct: 702 LVKSKIAKDADFGRSLYQRLCTMGYSKHLLEVQYRMHPSISKFPNSNFYDNRISDGPIVR 761
Query: 691 SKSYEKQYLTGTEFGTYSFINIIGGRE--DFIYHSCRNIVEVSAVIKILQKLYKAWVGSK 748
+ Y K YL G +G YSFI+I E D + S +N+ EV+ I+++L K +
Sbjct: 762 QEDYAKSYLPGPIYGAYSFIHIDNDMEMLDSLGQSSKNMAEVAVAANIVERLAKECTEKR 821
Query: 749 QKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG 808
Q+ S+G++SPYTAQV+A++ ++G ++E D +V VKSIDGFQGGEEDII+ISTVR N
Sbjct: 822 QRTSVGIISPYTAQVIALQDRLGRKFEKHDFLSVTVKSIDGFQGGEEDIILISTVRSNKD 881
Query: 809 GSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERN 868
G +GF+S R+NVALTRA++CLWILG+ TL++S SIW LV D+K R+CFF+A ++++
Sbjct: 882 GKVGFLSDSGRINVALTRAKYCLWILGNGTTLLASNSIWADLVRDSKRRRCFFDAFKDKD 941
Query: 869 LAKARLEVSK 878
LA+ + +K
Sbjct: 942 LAEVVMFATK 951
Score = 94.7 bits (234), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 9/155 (5%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
V SWS++ I + +D+V KIPE+F S++QY S+ PLLEE R + S +E + APY
Sbjct: 60 VLSWSVDQILDKDLLRDKVSKIPETFSSIEQYMTSYFGPLLEEVRGDMCSSMEDISNAPY 119
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRV 150
A +++ ++ G Y I + WR T G + YK D+L++++ KP SD+ +
Sbjct: 120 ADLLSVNSMR-KGKGSYEISLGRWRGTSHGCGIDNYKPKSADVLLISETKPANQSDILKQ 178
Query: 151 GRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQV 185
++ V V+ V N+ VKA M+
Sbjct: 179 SKSCVIVWVSKV--------NGNKMTVKASQLMET 205
>gi|186527077|ref|NP_198531.2| DEXDc and putative helicase domain-containing protein [Arabidopsis
thaliana]
gi|332006764|gb|AED94147.1| DEXDc and putative helicase domain-containing protein [Arabidopsis
thaliana]
Length = 839
Score = 534 bits (1375), Expect = e-148, Method: Compositional matrix adjust.
Identities = 330/880 (37%), Positives = 499/880 (56%), Gaps = 69/880 (7%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
VFSWS++DI ++ F+K + +P+ F+SV +Y+ FV LL E +L S L+++ ++P+
Sbjct: 13 VFSWSIKDILNKDFYKQKT--VPDKFRSVDEYYQCFVPHLLIEAHTELFSSLKSVSKSPF 70
Query: 91 AQVIAFEELKPYGTNQYGIEVDY---WRNTISNSGKEPYKTLPGDILVLADFKPEKVSDL 147
Q+ + E + ++ Y + T S S K Y+ GD++ L KP +++DL
Sbjct: 71 VQIRSMETKTKQSSGSSSNKLFYDITLKATESLSAK--YQPKCGDLIALTMDKPRRINDL 128
Query: 148 RRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRI 207
+ + F S D + K + + ++ + ++ + F ++L + N RI
Sbjct: 129 NPLLLAYVFSS--------DGDLKISVHLSRSISPLENYS------FGVFLMTLTTNTRI 174
Query: 208 WNSLHMCGNWKVITQ-VLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAML 266
WN+LH +T+ VL ++V + + ++ G S+ LN SQ A+L
Sbjct: 175 WNALHNEAAISTLTKSVLQANTVNN----VFVLKMMGDLTLFLDIIRSTKLNSSQEDAIL 230
Query: 267 ACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRV 326
CL +C H++ V+LIWGPPGTGKTKTV+ LL LL+++C+T+ C PTN AI ++ASR+
Sbjct: 231 GCLETRNCTHKNSVKLIWGPPGTGKTKTVATLLFALLKLRCKTVVCAPTNTAIVQVASRL 290
Query: 327 LKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPG---FEEIYLNYRIKKLRECFAP 383
L L KE +S S LG+I+L GN+DR+ ++ +++L+ RI KL + F+P
Sbjct: 291 LSLFKE----NSTSENATYRLGNIILSGNRDRMGIHKNDHVLLDVFLDERIGKLGKLFSP 346
Query: 384 LSGWRHCFSSMIDLLEDCVSQY--HIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKP 441
SGW S+I LE+ +Y H+Y + ER + + +E T G
Sbjct: 347 FSGWMQRLESLIQFLENPEGKYERHVYELEEVERME-EEAERQEVVVNIPTIG------- 398
Query: 442 FLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVV 501
++V++ F + CI THLPK Y+ + + M+A + L L ++
Sbjct: 399 --EFVKKNFNSLSEEVETCIVDLFTHLPKVYLPYDDVKIMIASRQSLQRIRYFLREN--- 453
Query: 502 SKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRS-ECLSVLRNLWNSLDELNLPCTTSKL 560
S VD F + +R S +CL LR L + +P
Sbjct: 454 --------SSRVD------FEEGNFRFDCFKRLSVDCLKALRLLPKRFE---IPDMLENE 496
Query: 561 VLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAV 620
+ FC + A + TAS + +++ + LV+DEAAQLKE ES LQL G+ HA+
Sbjct: 497 DIRKFCLQNADIILCTASGAAEMNVERTGNVELLVVDEAAQLKECESVAALQLPGLRHAI 556
Query: 621 LIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYR 680
LIGDE QLPAMV +++ ++A FGRSLFERL L H+KHLL++QYRMHPSIS FPN +FY
Sbjct: 557 LIGDEFQLPAMVHNEMCEKAKFGRSLFERLVLLGHNKHLLDVQYRMHPSISRFPNKEFYG 616
Query: 681 NQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDF-IYHSCRNIVEVSAVIKILQK 739
+I D NVK Y+K++L G FG++SFIN+ G+E+F HS +N+VEV+ V +I+
Sbjct: 617 GRIKDAENVKESIYQKRFLQGNMFGSFSFINVGRGKEEFGDGHSPKNMVEVAVVSEIISN 676
Query: 740 LYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDG--FTVKVKSIDGFQGGEEDI 797
L+K + KVS+GVVSPY Q+ AI++KIG +Y + G F + V+S+DGFQGGEEDI
Sbjct: 677 LFKVSCERRMKVSVGVVSPYKGQMRAIQEKIGDKYSSLSGQQFALNVRSVDGFQGGEEDI 736
Query: 798 IIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
IIISTVR N+ G +GF++ QR NVALTRARHCLW++G+E TL S SIW L+ +++ R
Sbjct: 737 IIISTVRSNSNGKVGFLNNRQRANVALTRARHCLWVIGNETTLALSGSIWATLISESRTR 796
Query: 858 QCFFNADEERNLAKARLEVSKELVEIGAESLTSTSQGGKK 897
CF++A +E NL A E E V SL+ + G++
Sbjct: 797 GCFYDATDEMNLRNAMNEALLEDVSSSLGSLSIRNGHGRR 836
>gi|10177999|dbj|BAB11372.1| unnamed protein product [Arabidopsis thaliana]
Length = 880
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 333/904 (36%), Positives = 504/904 (55%), Gaps = 87/904 (9%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
VFSWS++DI ++ F+K +++ +P+ F+SV +Y+ FV LL E +L S L+++ ++P+
Sbjct: 24 VFSWSIKDILNKDFYKQKLKTVPDKFRSVDEYYQCFVPHLLIEAHTELFSSLKSVSKSPF 83
Query: 91 AQVIAFEELKPYGTNQYGIEVDY---WRNTISNSGKEPYKTLPGDILVLADFKPEKVSDL 147
Q+ + E + ++ Y + T S S K Y+ GD++ L KP +++DL
Sbjct: 84 VQIRSMETKTKQSSGSSSNKLFYDITLKATESLSAK--YQPKCGDLIALTMDKPRRINDL 141
Query: 148 RRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRI 207
+ + F S D + K + + ++ + ++ + F ++L + N RI
Sbjct: 142 NPLLLAYVFSS--------DGDLKISVHLSRSISPLENYS------FGVFLMTLTTNTRI 187
Query: 208 WNSLHMCGNWKVITQ-VLGTDSVVDERC---------------ELCSVQRKGQWDEKFGP 251
WN+LH +T+ VL ++V E+C + ++ G
Sbjct: 188 WNALHNEAAISTLTKSVLQANTVGLEQCFCFGFRTMFLIWVQNNVFVLKMMGDLTLFLDI 247
Query: 252 SFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLA 311
S+ LN SQ A+L CL +C H++ V+LIWGPPGTGKTKTV+ LL LL+++C+T+
Sbjct: 248 IRSTKLNSSQEDAILGCLETRNCTHKNSVKLIWGPPGTGKTKTVATLLFALLKLRCKTVV 307
Query: 312 CTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPG---FEEI 368
C PTN AI ++ASR+L L KE +S S LG+I+L GN+DR+ ++ ++
Sbjct: 308 CAPTNTAIVQVASRLLSLFKE----NSTSENATYRLGNIILSGNRDRMGIHKNDHVLLDV 363
Query: 369 YLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQY--HIYVEKLKEREDCNVNQSEEK 426
+L+ RI KL + F+P SGW S+I LE+ +Y H+Y + ER + + +E
Sbjct: 364 FLDERIGKLGKLFSPFSGWMQRLESLIQFLENPEGKYERHVYELEEVERME-EEAERQEV 422
Query: 427 ECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKS 486
T G ++V++ F + CI THLPK Y+ + + M+A +
Sbjct: 423 VVNIPTIG---------EFVKKNFNSLSEEVETCIVDLFTHLPKVYLPYDDVKIMIASRQ 473
Query: 487 LLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRS-ECLSVLRNLW 545
L L ++ S VD F + +R S +CL LR L
Sbjct: 474 SLQRIRYFLREN-----------SSRVD------FEEGNFRFDCFKRLSVDCLKALRLLP 516
Query: 546 NSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKES 605
+ +P + FC + A + TAS + +++ + LV+DEAAQLKE
Sbjct: 517 KRFE---IPDMLENEDIRKFCLQNADIILCTASGAAEMNVERTGNVELLVVDEAAQLKEC 573
Query: 606 ESTIPLQLAGINHAVLIGDECQLPAMVES---------KISDEAGFGRSLFERLTSLNHS 656
ES LQL G+ HA+LIGDE QLPAMV + ++ ++A FGRSLFERL L H+
Sbjct: 574 ESVAALQLPGLRHAILIGDEFQLPAMVHNEYCNMGIMWQMCEKAKFGRSLFERLVLLGHN 633
Query: 657 KHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGR 716
KHLL++QYRMHPSIS FPN +FY +I D NVK Y+K++L G FG++SFIN+ G+
Sbjct: 634 KHLLDVQYRMHPSISRFPNKEFYGGRIKDAENVKESIYQKRFLQGNMFGSFSFINVGRGK 693
Query: 717 EDF-IYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYE 775
E+F HS +N+VEV+ V +I+ L+K + KVS+GVVSPY Q+ AI++KIG +Y
Sbjct: 694 EEFGDGHSPKNMVEVAVVSEIISNLFKVSCERRMKVSVGVVSPYKGQMRAIQEKIGDKYS 753
Query: 776 NKDG--FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWI 833
+ G FT+ V+S+DGFQGGEEDIIIISTVR N+ G +GF++ QR NVALTRARHCLW+
Sbjct: 754 SLSGQQFTLNVRSVDGFQGGEEDIIIISTVRSNSNGKVGFLNNRQRANVALTRARHCLWV 813
Query: 834 LGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAESLTSTSQ 893
+G+E TL S SIW L+ +++ R CF++A +E NL A E E V SL+ +
Sbjct: 814 IGNETTLALSGSIWATLISESRTRGCFYDATDEMNLRNAMNEALLEDVSSSLGSLSIRNG 873
Query: 894 GGKK 897
G++
Sbjct: 874 HGRR 877
>gi|357491661|ref|XP_003616118.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
gi|355517453|gb|AES99076.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
Length = 950
Score = 530 bits (1366), Expect = e-147, Method: Compositional matrix adjust.
Identities = 325/879 (36%), Positives = 478/879 (54%), Gaps = 115/879 (13%)
Query: 49 VEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPYAQVIAFEELKPYGTNQYG 108
V KIP++F S Y SF L+EET L S L + +A + ++ E K +
Sbjct: 92 VPKIPKTFISTNDYVNSFFPALIEETHSYLSSSLWNVPQA-FCEIRTMEISKDFNYPH-- 148
Query: 109 IEVDYWRNTISNSGKEPY---KTLP--GDILVLADFKPEKVSDLRRVGRTWTFVSVTTVP 163
+++ T+ N+ +E Y K P GD++ + +P VSDL R+ R + +
Sbjct: 149 --ALFYQTTLKNTTEEVYGVGKYEPEVGDLVAFTNVRPRSVSDLSRIER-YCHIGYICGS 205
Query: 164 DDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWNSLHMC---GNWKVI 220
DE ++ + NN+ + + + +YL N+ N RIWN+L+ N +I
Sbjct: 206 KDELNDQITMLLSKEMHNNIDLRSNKAQKLYVVYLINMTTNIRIWNALNSDMEESNMNII 265
Query: 221 TQVLGTDSVVDERCELCSVQRKGQWDEKFGP-SFS--------STLNESQVGAMLACLRR 271
+VL S +++ C C W ++ P S+S LN+SQ ++L+C
Sbjct: 266 KKVLQPYSRMEQNCHTC-------WSGEYLPQSYSRVKNMIKAQNLNKSQEDSILSCFHI 318
Query: 272 LDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVK 331
C H ++LIWGPPGTGKTKTV+ +L LL+++ RTL C PTN A+ + SR+ + K
Sbjct: 319 KKCHHNDPIKLIWGPPGTGKTKTVASMLFCLLKLRIRTLTCAPTNTAVLAVVSRLHSIAK 378
Query: 332 ESYKRDSRSNTPICPLGDILLFGNKDRLKVNP--GFEEIYLNYRIKKLRECFAPLSGWRH 389
+S + S LGDI+LFGN R+K++ E++L R+ L F+P++GW +
Sbjct: 379 DSLEHGSYG------LGDIVLFGNSKRMKIDSYKDLGEVFLENRVDDLLHAFSPMTGWIN 432
Query: 390 CFSSMIDLLEDCVSQYHIY--------VEKLKEREDCNVNQ------SEEKECRKETEGS 435
SMI LL+D QY +Y V L+E + N N S K C + +
Sbjct: 433 SLESMIKLLKDPEEQYDLYKNDVNEGVVMSLEEFANGNYNHVKNAYFSYTKHCEHDCPMT 492
Query: 436 -------------------KGERKPFL-----KYVRERFKCAVVSLRNCIFIFCTHLPKS 471
K ++K + +++R+RF L+ + CTHLP
Sbjct: 493 LEEFVKKKYDYIIEQYDMYKDDKKLSIGMSMEQFLRQRFCFIGGKLKLFMKTLCTHLPTC 552
Query: 472 YISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLH 531
++ +++ + LL K LEK H +E
Sbjct: 553 FLPIKVAKKVFRVLELL--------------KSLEKEALHEKEE---------------- 582
Query: 532 QRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPL 591
+L L + + LP TSK + FC K A L TASS KL S + +
Sbjct: 583 --------LLHTLCFLSETIKLPKVTSKYGISQFCLKNACLLLCTASSCVKLFSEGMAQV 634
Query: 592 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT 651
FLVIDEAAQLKE ES IPLQL G+ VL+GDE QLPAMV+S+I+D AGFGRSLFERL
Sbjct: 635 EFLVIDEAAQLKECESAIPLQLNGLKRCVLVGDEIQLPAMVKSEIADRAGFGRSLFERLA 694
Query: 652 SLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
+L + KH+LN+QYRMHPSIS+FP+ +FY ++ D V+ SY K++L G +G+YSFIN
Sbjct: 695 TLGYKKHMLNVQYRMHPSISIFPSREFYNKKLSDSQIVREISYNKRFLGGKMYGSYSFIN 754
Query: 712 IIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
I G+E + HS +N++E +A+ +I+ ++ K +V ++ KVSIG++SPY AQV I++++
Sbjct: 755 ISKGKEQCNHDHSLKNVIEAAAISEIIGRIQKEFVRTRNKVSIGIISPYKAQVHEIQERV 814
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
+ F++ V+S+DGFQGGEED+IIISTVR N GG +GF+S QR NVA+TRAR+C
Sbjct: 815 KQYMVSAPNFSINVRSVDGFQGGEEDLIIISTVRSNFGGKVGFLSNRQRTNVAITRARYC 874
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNADEERNL 869
LWI+G+ TLI+S S+W +V DAK R CF NADE++ L
Sbjct: 875 LWIVGNATTLINSNSVWRKVVMDAKQRNCFHNADEDKKL 913
>gi|297801236|ref|XP_002868502.1| hypothetical protein ARALYDRAFT_915833 [Arabidopsis lyrata subsp.
lyrata]
gi|297314338|gb|EFH44761.1| hypothetical protein ARALYDRAFT_915833 [Arabidopsis lyrata subsp.
lyrata]
Length = 819
Score = 527 bits (1358), Expect = e-146, Method: Compositional matrix adjust.
Identities = 315/853 (36%), Positives = 469/853 (54%), Gaps = 85/853 (9%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
+FSWS++DI ++ +K +++ IP+ F S +YF FV LLEE R L S +++ +AP
Sbjct: 13 IFSWSIKDILNKDLYKQKIKTIPDRFSSTDEYFKCFVPHLLEEMRTALCSSFKSISKAPL 72
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTIS-NSGKEPYKTLP--GDILVLADFKPEKVSDL 147
++ + E+ T++ + + +T+ G+ K P GD++ L KP DL
Sbjct: 73 FKISSLEK----STHESSGSCNNFLHTLKLMDGENDAKYQPHCGDLIALTKTKPRSFRDL 128
Query: 148 RRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRI 207
+ +VSV P DE ++ + + + HD+ F ++L N N RI
Sbjct: 129 NPL--LLAYVSVDNHPKIWDEKRERHPNISVILSRLMSHDEKVSLGFGVFLMNSTTNNRI 186
Query: 208 WNSLHM-CGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAML 266
WN+LH N+ I +L ++ ++ +V + S+ LN SQ A+L
Sbjct: 187 WNALHHEAPNFDFIQSILQPNTAGIKQ----TVSSRNLGQNVLDIIRSTNLNSSQKSAIL 242
Query: 267 ACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRV 326
+CL + H++ V+LIWGPPGTGKTK VS LL LL+++C+T+ C PTN A+ E+ SR+
Sbjct: 243 SCLETRNSKHKNSVKLIWGPPGTGKTKMVSTLLSALLKLRCKTVVCAPTNTAVVEVTSRL 302
Query: 327 LKLVKESYKRDSRSNTPICPLGDILLFGNKDRL--KVNPGFEEIYLNYRIKKLRECFAPL 384
L L K S + S LG+I+L GN +R+ K + ++L++RI ++ F
Sbjct: 303 LALSKTSSEHASYG------LGNIVLAGNHNRMGIKNDDDLRNVFLDHRISSFQKLFLSP 356
Query: 385 SGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPFLK 444
GW+ F S+I LE+ +++ YV+
Sbjct: 357 YGWKQRFESVIHFLENTEAEFKEYVQ---------------------------------- 382
Query: 445 YVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKE 504
+V+++F L + CTHLPKS IS N ++M+ + L L +++
Sbjct: 383 FVKKKFNGLSEGLEKDMVDLCTHLPKSLISSNDVKKMIEARQALHRVRYFLQENSSTFDS 442
Query: 505 LEKLFSH--SVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVL 562
+ F SVD + + + KR+ V N D +
Sbjct: 443 KKGSFKRIISVDCIQALSLIPKRF------------KVPELFENEED------------I 478
Query: 563 EDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLI 622
FC + A + F TAS + +++ + FLV+DEAAQLKE ES LQL G+ HAVL+
Sbjct: 479 RKFCLQNADIIFCTASGAAEMNGERTGNVEFLVVDEAAQLKECESVAALQLQGLRHAVLL 538
Query: 623 GDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQ 682
GDE QLPAMV + ++A FGRSLFERL +L HSKHLL++QYRMHPSI FPN +FY +
Sbjct: 539 GDEFQLPAMVHNDECEKAKFGRSLFERLVTLGHSKHLLDVQYRMHPSIISFPNKEFYGGR 598
Query: 683 ILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDF-IYHSCRNIVEVSAVIKILQKLY 741
I D ANV+ YEK+YL G FG++SFIN+ G+E+F HS +N+VEV+ + +IL L+
Sbjct: 599 IKDAANVQESIYEKRYLQGNMFGSFSFINVGHGKEEFGDGHSPKNMVEVAVISEILSNLF 658
Query: 742 KAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDG--FTVKVKSIDGFQGGEEDIII 799
K K +S+GV++PY QV AI+ +I +Y + G FT+ V+S+DGFQGGEED+II
Sbjct: 659 KVSSERKINMSVGVITPYKGQVRAIQDRIIDKYSSLSGELFTLNVRSVDGFQGGEEDVII 718
Query: 800 ISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQC 859
ISTVR N +GF+S QR NVALTRARHCLW++G+E TL S SIW LV D+K R+C
Sbjct: 719 ISTVRSNCNRKVGFLSNRQRANVALTRARHCLWVIGNETTLARSGSIWAKLVRDSKRRKC 778
Query: 860 FFNADEERNLAKA 872
F++A +++ L A
Sbjct: 779 FYDAKDDKRLRDA 791
>gi|242051270|ref|XP_002463379.1| hypothetical protein SORBIDRAFT_02g042725 [Sorghum bicolor]
gi|241926756|gb|EER99900.1| hypothetical protein SORBIDRAFT_02g042725 [Sorghum bicolor]
Length = 989
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 338/914 (36%), Positives = 493/914 (53%), Gaps = 119/914 (13%)
Query: 48 QVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPYAQVIAFEELKPYGTNQY 107
+V +IP++F S+ Y SF PL+EE + S L A + ++I E+L + +
Sbjct: 103 RVHRIPDTFMSLHAYLDSFKGPLIEEVHYDVFSSLNGYAHANFIEIIRLEKLSDEKS-IF 161
Query: 108 GIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDED 167
EV + +E Y GDI++++ KP+ VSDL + + SV D+ED
Sbjct: 162 CFEVSM--PSKDEKSREIYVPKHGDIIIVSSQKPKHVSDLTKNRTLYNLGSVLKSGDEED 219
Query: 168 ENKKENRYKVKARNNMQVHDKTKKSF-----FFIYLTNILPNKRIWNSLHMCGN------ 216
+ N V+ R+ + V + S F ++L NI IW LH+ N
Sbjct: 220 SDLPPNCCIVRFRSVIHVEVDPETSMPTGPCFAVFLINIKTYDHIWKCLHLGANDHKFAA 279
Query: 217 --------------WKVITQVLGTDSVVDERCELCSVQRKGQWD---EKFGPSFSSTLNE 259
W+ QV S + +C + RK D EKF LN+
Sbjct: 280 LEGRGANTAIVNLVWQYKKQVCHVVSNISSQC----LTRKSVDDLGLEKFN------LND 329
Query: 260 SQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAI 319
SQ+ A+ C+ ++LIWGPPGTGKTKT+S +L +L RTL C PTN A+
Sbjct: 330 SQLNAVADCVSSAIENRSPSLKLIWGPPGTGKTKTISTILWAMLMKGLRTLTCAPTNTAV 389
Query: 320 TELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVN--PGFEEIYLNYRIKKL 377
E+ASR+++LV++S S+ +C L DI+LFGNK+++K+ ++L+ R ++L
Sbjct: 390 LEIASRIVRLVEQS------SDGSVCFLNDIVLFGNKEKMKIRHEDDLSMVFLDSRAERL 443
Query: 378 RECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKL----KEREDCNVNQSEEKECRKETE 433
CF P +GW HC S+ID LE+ ++ Y ++VEK+ +++E N ++ C+
Sbjct: 444 LPCFMPCTGWMHCLRSLIDHLENPITSYRLHVEKILEDERKKESAKKNTCKDGICKAHDV 503
Query: 434 GSKGER---------------KPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSF 478
G R PF Y ++ F A LR I I P++ + +SF
Sbjct: 504 GDNSARASCVLLSEPSAKVRIPPFEDYFKDYFNKATKKLREYIEIMYNDHPRNPETGHSF 563
Query: 479 QEMVALKSLLDSFGNLL-FQDNVV-SKELEKLFSHSVDEGISW----AFVR----KRYLL 528
Q M+ + L++ L+ +++N V S E I W A VR K+Y
Sbjct: 564 QCMLEVLELIEILQKLINYKNNDVWSDEFHDCNIEDDGNPILWSEQLARVRSNTSKKYKF 623
Query: 529 QLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEI 588
+L RS C+ LR L +L+ LP S ++ + +R T SSS++L++V +
Sbjct: 624 KL--ARSLCVQELRYLHKNLE---LPHYYSMRSIQIYLLQRTKCILCTVSSSFRLYNVPL 678
Query: 589 ------------KP-----LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAM 631
KP L+ L++DEAAQLKE E+ IPLQL GI AV IGDE QLPA+
Sbjct: 679 GNPSTDICSLLKKPEKFKFLDMLIVDEAAQLKECETLIPLQLPGIRQAVFIGDEYQLPAL 738
Query: 632 VESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKS 691
V+SKISD A FGRS+FERL+ L H KHL FY +I +G NV S
Sbjct: 739 VKSKISDSANFGRSVFERLSLLGHEKHL-----------------PFYDGKISNGPNVTS 781
Query: 692 KSYEKQYLTGTEFGTYSFINIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQ 749
KSY++ +L FG YSFIN+ GG E H S +N VEV+AV++I+Q+L+K V ++
Sbjct: 782 KSYDRMFLASKIFGPYSFINVDGGHETTEKHGQSLKNTVEVAAVVRIVQRLFKESVSTRS 841
Query: 750 KVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGG 809
K+S+GVVSPY AQV AI +K+G Y DGF+VKVKS+DGFQG EEDIIIISTVR N G
Sbjct: 842 KLSVGVVSPYNAQVRAIHEKVGKSYNTYDGFSVKVKSVDGFQGAEEDIIIISTVRSNGAG 901
Query: 810 SIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNL 869
S+GF++ QR NVALTRA+HCLWI+G+ TL +S+S+W +V DA+ R C+F A ++++L
Sbjct: 902 SVGFLTNLQRTNVALTRAKHCLWIVGNGTTLSNSKSVWQKVVKDARDRGCYFEASDDKDL 961
Query: 870 AKARLEVSKELVEI 883
+ A ++ EL ++
Sbjct: 962 SNAVVKAIIELDDV 975
>gi|302143701|emb|CBI22562.3| unnamed protein product [Vitis vinifera]
Length = 977
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 340/888 (38%), Positives = 479/888 (53%), Gaps = 120/888 (13%)
Query: 22 KAVGFAGHTVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSG 81
K+ G H VFSWSL D+ +Q+ +KD+V IP+ F S + Y GSF+ L+EETR L S
Sbjct: 10 KSTGLIDH-VFSWSLNDVQNQALYKDKVSPIPDKFSSRRHYMGSFIVSLIEETRADLSSS 68
Query: 82 LEAM-----------RRAPYAQVIAFEELKPY-GTNQYGIE----VDYWRNTISNSGK-- 123
+ P + A EL ++Q+ + D ++ +G
Sbjct: 69 IRTACEASESESESSTWEPTSVDTAARELMSIEKSSQFKLPRYFLYDVSLKSVEGNGNNA 128
Query: 124 EPYKTLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNM 183
E Y+ GDI+ L D P + + VT + + K +
Sbjct: 129 EVYEPQAGDIIALTDKIPYYIES----ESCYNIALVTGSYGKTSDKLQIQSPKPMMHEQI 184
Query: 184 QVHDKTKKSFFFIYLTNILPNKRIWNSLHMC---GNWKVITQVLGTDSVVDERCELCSVQ 240
+K +++ + +YL NI N IW +LH GN ++I +VL TDS C LCS
Sbjct: 185 MSDNKKRRTIYAVYLINITTNNCIWEALHRSPHGGNIRIIDKVLQTDSSAGRGCALCSSG 244
Query: 241 R---KGQWD-EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVS 296
K D E SF LN SQ A+L+C+ C H + V+LI GPPGTGKTKTV+
Sbjct: 245 SEAFKSVTDLEDRIRSFG--LNLSQEEAVLSCISAAMCHHENSVKLIKGPPGTGKTKTVA 302
Query: 297 MLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNK 356
LL +L++KCRTLAC PTN A+ R+L VK S + + +GDI+LFG+
Sbjct: 303 SLLFAVLKMKCRTLACAPTNTAVLLATERLLSFVKGSLENGTYG------MGDIVLFGST 356
Query: 357 DRLKVNPGFEE---IYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLK 413
++++ +E I+L+ R L CFA SGW+H SMI LL++ Y++
Sbjct: 357 RGMQIDDCDDELHDIFLDSRANILARCFAQGSGWKHSLESMITLLQNLEGNYNL------ 410
Query: 414 EREDCNVNQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYI 473
C N+ +E E +G +G+ L IFI K I
Sbjct: 411 ----CLGNREDEG---NEEQGKQGK------------------LGKGIFID----EKEEI 441
Query: 474 SENSFQEMV--ALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLH 531
+ +FQ + +K+++ + NLL K L L
Sbjct: 442 DKKNFQSLKFNVMKNMVRAL-NLL-------KNLSDL----------------------- 470
Query: 532 QRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKL-HSVEIKP 590
R CL LR+L ++P ++ ++ C K A L F T SSS KL H ++K
Sbjct: 471 -RTEVCLQTLRSLGKMF---SVPTLANEYKIKSLCLKNAVLIFCTVSSSSKLLHIKDMKG 526
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
+ LVIDEAAQLKE ESTIPLQ++GI HAVL+GDE QLPA+V+SK + F RSLFERL
Sbjct: 527 IELLVIDEAAQLKECESTIPLQISGIRHAVLVGDEMQLPALVKSKELENTKFERSLFERL 586
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFI 710
SL H KHLL++QYRMHPSISLFPN +FY I++ VK Y +++L G +G +SFI
Sbjct: 587 VSLRHYKHLLDVQYRMHPSISLFPNNEFYEGDIINAPKVKEAIYSRRFLHGNMYGPFSFI 646
Query: 711 NI---IGGREDF-IYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
N+ + E+F + HS +N+VEV+ V +I+ L++ K+KVS+G++SPY AQV I
Sbjct: 647 NVASTVPELEEFNVRHSSKNMVEVAVVSQIIASLFEETKARKEKVSVGIISPYKAQVHEI 706
Query: 767 RKKIGFEY--ENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
+KK+G Y + + F++KV ++DGFQG EED+IIISTVRCN+GG IGF+ +R NV+L
Sbjct: 707 QKKLGKAYSTDAESQFSIKVSTVDGFQGDEEDVIIISTVRCNSGGHIGFVKNYRRANVSL 766
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKA 872
TRARHCLWI G+ +TL S S+W +V AK ++CF+NA E+ NLAKA
Sbjct: 767 TRARHCLWITGNAKTLEDSHSVWEKVVQHAKGQRCFYNAYEDTNLAKA 814
>gi|357140936|ref|XP_003572012.1| PREDICTED: uncharacterized protein LOC100831140 [Brachypodium
distachyon]
Length = 1373
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 322/877 (36%), Positives = 494/877 (56%), Gaps = 94/877 (10%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
VFSWS++ I ++ +D+V KIP++F S++QY SF PLLEE R + S +E + RAP+
Sbjct: 63 VFSWSVDQILNKDLLRDKVSKIPDTFHSMEQYMTSFFGPLLEEVRGDMCSSMEDISRAPF 122
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRV 150
A V + + ++ G Y I++D WR G E Y+ D+L++++ +PE SD+ +
Sbjct: 123 ASVQSVDAMR-KGKGLYEIKLDRWRGGSHGCGTEGYRPKAADVLLISETRPENQSDILKQ 181
Query: 151 GRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQ--VHDKTKKSFFFIYLTNILPNKRIW 208
++ + V V + N+ VKA M+ H ++ I NK +
Sbjct: 182 SKSCVIIWVNKV--------QGNKMTVKASRRMETGAHGDERQ--------QIGVNK--Y 223
Query: 209 NSLHMCG---NWKVITQVL----GTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQ 261
L+ G +W+++ Q +S V+++ V ++ D K + + +++
Sbjct: 224 EKLYAEGFDKSWEMLDQEAMAPKSRNSSVNQK-----VWKEPPNDRKRSKNSTDPQEQNE 278
Query: 262 VGAMLACLRR-----LDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLR--IKCRTLACTP 314
G RR + + + +W G T ++L L + K R LAC P
Sbjct: 279 TGIYGNSSRRWSFYAMYLTNMITYDRVWIVLRRGLTMDSRIILNMLGKNNHKQRILACAP 338
Query: 315 TNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRI 374
TN+A+ ++ASR++ L+++ + S GDI+LFGNKDRL + +IYL+ R+
Sbjct: 339 TNMAVLQVASRLIGLIEDFSLKHHYS------FGDIILFGNKDRLHIGKELSKIYLDDRV 392
Query: 375 KKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVE-KLKEREDCNVNQSEEKECRKETE 433
KL CF +GW+HC S++ L +C+S++ + ++ + +CN+
Sbjct: 393 HKLLRCFKRENGWKHCVDSVLKFLTNCISRHRMSLDIQPAGSGECNLT------------ 440
Query: 434 GSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGN 493
F KY +F L CI F HLP + +N F +M+ LKSLLD +
Sbjct: 441 --------FKKYFTSKFSSLAKELVACISTFSDHLPVDTLGKN-FDKMMFLKSLLDKMQH 491
Query: 494 LLFQDNVVSKELEKLFSHS----------------VDEGISWAFVRKRYLLQLHQRRSEC 537
LL D+V + L K+F S EG+ + L++ +S C
Sbjct: 492 LLCADDVSDELLFKIFKPSDKLPDPSTSHDDLADDATEGLPDLDISLDNPLEI---KSMC 548
Query: 538 LSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVE-IKPLNFLVI 596
+ +L +L ++ LPC ++ + D C K+A L F TAS S+ L ++ + P++ LVI
Sbjct: 549 IKILMDL----SKMRLPCEDNESSIRDMCLKQAKLIFCTASGSFDLFRLQSVLPISILVI 604
Query: 597 DEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHS 656
DEAAQLKESES +PL L GI H +LIGDE QL ++V+SKI+ + FGRSL+ERL +++++
Sbjct: 605 DEAAQLKESESLVPLLLPGIEHVLLIGDENQLSSLVKSKIAKDVDFGRSLYERLCAMDYN 664
Query: 657 KHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGR 716
KHLL +QYRMHP IS FPN +FY N+I D +VK K Y K YL G +G+YSFI+I
Sbjct: 665 KHLLEVQYRMHPCISKFPNAKFYGNRISDSPSVKKKDYTKSYLPGPIYGSYSFIHIENDM 724
Query: 717 E--DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEY 774
E D + S +N+VEV+ I+++L K ++ S+GV+SPYTAQV+A+++K+G ++
Sbjct: 725 EMLDDLGQSSKNMVEVAVAANIIERLAKECWKKSRRTSVGVISPYTAQVIALQEKLGRKF 784
Query: 775 ENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWIL 834
E + +V VKSIDGFQGGEEDII+ISTVR N G IGF+S R+NVALTRA+HCLWIL
Sbjct: 785 EKHEFLSVTVKSIDGFQGGEEDIILISTVRSNKDGKIGFLSDAGRINVALTRAKHCLWIL 844
Query: 835 GSERTLISSESIWGALVCDAKARQCFFNADEERNLAK 871
G+ TL++S SIW LV D+K R CFF A ++++LA+
Sbjct: 845 GNGATLLASNSIWAELVNDSKRRGCFFEARKDKDLAE 881
>gi|357491665|ref|XP_003616120.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
gi|355517455|gb|AES99078.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
Length = 932
Score = 517 bits (1332), Expect = e-143, Method: Compositional matrix adjust.
Identities = 335/929 (36%), Positives = 495/929 (53%), Gaps = 144/929 (15%)
Query: 30 TVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAP 89
V SW+ ED+ +++ +KD+V KIPE+F+S +Y SFV L EET L S L A+ +AP
Sbjct: 57 VVLSWTYEDVLNENLYKDKVHKIPETFKSATEYKNSFVPLLFEETHTDLSSSLFAVSQAP 116
Query: 90 YAQVIAFEELK------PYGTNQYGIEVDYWRNTISNSGKEP--------YKTLPGDILV 135
+ ++ ++ P NQ+ + + + S E YK + GD++
Sbjct: 117 FCEINNVQKTAQWKLSIPKDQNQF---IQFHHDIRLKSTTESDEVEDVGNYKPVSGDLIA 173
Query: 136 LADFKPEKVSDLRRVGRTWTFVSV-------TTVPD---------------DEDENKKEN 173
+P+ ++DL + + V +PD D+ +N KE
Sbjct: 174 FTHIRPKSLNDLNTLQSPYRIAYVKKAIKAGNGIPDRISVLSCKCMKMDIKDDLQNNKER 233
Query: 174 RYKVKARNNMQVHD----KTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSV 229
K NM + D + + +YL N+ N RI +L + +I +LG +
Sbjct: 234 SSKCM---NMDIEDDLWNNRELKLYAVYLMNMTTNVRICKALKSISHMNIIKTMLGPRPI 290
Query: 230 VDERCELCSVQRKGQWD--EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPP 287
E C+LC + Q ++ S LNESQ A+ +C+ ++C H + ++LIWGPP
Sbjct: 291 SGENCQLCPPEPDSQSSLIQEDVIIRSQNLNESQEDAVSSCVSMMNCNH-ADIKLIWGPP 349
Query: 288 GTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPL 347
GTGKTKTV+ LL +LL+++ RTL C PTN AI ++ASR+ +LV +S + D+ S L
Sbjct: 350 GTGKTKTVACLLFSLLKLQTRTLTCAPTNTAILQVASRLNRLVMDSLEHDTYS------L 403
Query: 348 GDILLFGNKDRLKVNP--GFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQY 405
GDI+LFGN R+ + G + +L+Y ++ L ECF P +GW+ SMI LL
Sbjct: 404 GDIVLFGNGKRMNFSSHQGLVKFFLDYHVENLMECFDPNTGWKTNLLSMIQLL------- 456
Query: 406 HIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFC 465
+S EK K+ E K K+V+++ K L +
Sbjct: 457 ----------------KSMEKSANKKESSEVFEYKQ--KFVQQKEK-----LEFLMQTLY 493
Query: 466 THLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKR 525
TH+P S IS ++M+ LL S G + Q + DE I
Sbjct: 494 THMPTSLISLEMVKKMLQAFDLLKSLGISIGQAKFKKR----------DESIP------A 537
Query: 526 YLLQLHQRRSECLSVLRNLWNSLD----ELNLPCTTSKLVLEDFCFKRASLFFSTASSSY 581
Y L+ +R ECLS+L +L ++ E + ++ +E FC A L T SSS
Sbjct: 538 YFQLLYVKRDECLSILSSLSKTVSLPYFETDRRGGIKRVQVEKFCLSYACLVLCTVSSSI 597
Query: 582 KL-HSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEA 640
KL H+ +KP+ FLV+DEAAQLKE E IPLQL G+ +LIGDE QLPA+V+SKI+D+
Sbjct: 598 KLIHASWLKPVQFLVVDEAAQLKECELAIPLQLHGLRRCILIGDERQLPALVKSKIADQC 657
Query: 641 GFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLT 700
FGRS+FERL L + + +LN+QYRMHPSISLFP +FY ++ D V +SY K +L
Sbjct: 658 EFGRSMFERLVMLGYERKMLNVQYRMHPSISLFPCKEFYDGKLCDAPVVGEESYNKLFLE 717
Query: 701 GTEFGTYSFINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPY 759
G + +YSFINI G+E F + S +N+VEV+ + +I++ LY+ ++ +++KVSIG+VSPY
Sbjct: 718 GEMYSSYSFINIAKGKEQFGHGQSLKNMVEVAVISEIIKSLYEVFMKTRKKVSIGIVSPY 777
Query: 760 TAQVVAIRKKI-GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQ 818
AQV I+++I + F+V V+S+DGFQGGEEDIIIISTVR N +
Sbjct: 778 NAQVYEIQEEIEQYTKVANSKFSVNVRSVDGFQGGEEDIIIISTVRSNG----------R 827
Query: 819 RVNVALTRA------------------------RHCLWILGSERTLISSESIWGALVCDA 854
R NVALTRA R+CLWILG+ TLI+S S+W +V DA
Sbjct: 828 RTNVALTRARYDVYNVQFVMLFLCLLKTEFILCRYCLWILGNASTLINSGSVWRNVVIDA 887
Query: 855 KARQCFFNADEERNLAKARLEVSKELVEI 883
K R CF N +E++ L++A +V +L ++
Sbjct: 888 KKRDCFHNVEEDKKLSQAIKDVLPQLRQL 916
>gi|414585753|tpg|DAA36324.1| TPA: hypothetical protein ZEAMMB73_446301 [Zea mays]
Length = 1465
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 343/935 (36%), Positives = 497/935 (53%), Gaps = 114/935 (12%)
Query: 21 KKAVGFAGHTVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRS 80
K + + + VFSWS+ DIF + + +V++IP++F S + Y SF +PL+EE + S
Sbjct: 246 KFGLSYLDNQVFSWSVSDIFDRDLLRKKVKRIPDTFTSFESYLDSFTWPLIEEVHADVFS 305
Query: 81 GLEAMRRAPYAQVIAFEEL---KPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLA 137
L+ A + +V L KP G V +E Y + DI+VL+
Sbjct: 306 SLDGYSEANFIEVTQVGNLDASKPI----LGFRVA--EPVKDEKSRETYVPVENDIIVLS 359
Query: 138 DFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQV----HDK-TKKS 192
KP VSDL + +FV + + E++ + V + + V H K K+
Sbjct: 360 SHKPRHVSDLTQ--NKSSFVLGSVIKTGEEDGFPPDWCVVHLSSAILVEADCHTKIPKRP 417
Query: 193 FFFIYLTNILPNKRIWNSLHM---CGN----------------WKVITQVLGTDSVVDER 233
F ++L N+ RIW LH+ C N W+ + +S +
Sbjct: 418 LFLVFLINMKTYNRIWRCLHLGQNCSNLFELQNKKSSGPVTKAWEFKPKPAEAESSQCSQ 477
Query: 234 CELCSVQRKGQWD--EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGK 291
C R +W EKFG LN+SQ+ A+ C+ +D + S ++L+WGPPGTGK
Sbjct: 478 PSQCFDGRLIEWLGLEKFG------LNDSQLNAVSDCVSLMD-SNSSSIKLLWGPPGTGK 530
Query: 292 TKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDIL 351
TKT+S +L +L RTLAC PTN A+ E+A+R++ L +S+ L DI+
Sbjct: 531 TKTISSILWAMLIKGRRTLACAPTNTAVLEIAARIVSLT-------VKSSDGTVFLNDIV 583
Query: 352 LFGNKDRLKVNPGF--EEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYV 409
LFGNK ++K++ + ++YLN+R ++L CF +GWRHC +IDLL + V++Y +
Sbjct: 584 LFGNKKKMKIDNDYYLSKVYLNFRAERLLPCFKSNTGWRHCLCVLIDLLVNSVTKYQL-- 641
Query: 410 EKLKEREDCNVNQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLP 469
E K F +++++ + +L + I I P
Sbjct: 642 --------------------------NNEDKTFKQHLKDDYNKLSRNLHSYITILYNDHP 675
Query: 470 KSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGIS---W----AFV 522
++ + SFQ M+ ++ LL L+ N ++L +++E ++ W A +
Sbjct: 676 RNLETGQSFQCMLEVRELLKILHTLINAGNGGDIWSDELLRSTIEEEVNPELWPSQLACI 735
Query: 523 RKRYL--LQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSS 580
R + RS CL L L +++ LP S + + R L T SS
Sbjct: 736 RTNSCNKSKFVAARSLCLQELIYLCKNME---LPNCYSAQDVRLYLLSRTRLIICTVCSS 792
Query: 581 YKLHSVEIK----PLNFLV-------------IDEAAQLKESESTIPLQLAGINHAVLIG 623
+KL+++ ++ L+ L+ IDEAAQLKE E+ IPLQL GI HAVLIG
Sbjct: 793 FKLYNIPMRNSSPSLHQLLNKPKILIPLELLIIDEAAQLKECETLIPLQLPGIRHAVLIG 852
Query: 624 DECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQI 683
DE QLP++V+SKISD A FGRS+FERL+SL +SKHLLNIQYRMHP IS FP FY ++
Sbjct: 853 DEYQLPSLVKSKISDSANFGRSVFERLSSLGYSKHLLNIQYRMHPDISRFPVGTFYDGKL 912
Query: 684 LDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYH--SCRNIVEVSAVIKILQKLY 741
DG NV K Y K +L G F YSFINI G E H S +N +EV AV+ I+Q L
Sbjct: 913 SDGPNVSHKDYNKMFLAGKLFRPYSFINIDGSHETNEMHGRSLKNSLEVDAVVMIVQSLL 972
Query: 742 KAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIIS 801
K + ++ K+SIGVV PY AQV AI++K+G D F+VKVKS+DGFQG EEDIIIIS
Sbjct: 973 KETLSTRSKLSIGVVCPYNAQVRAIQEKVGKPCRKYDYFSVKVKSVDGFQGAEEDIIIIS 1032
Query: 802 TVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFF 861
TVR N G++GF+S QR NVALTRA+HCLWI+G+ TL +S S+W +V D + R CFF
Sbjct: 1033 TVRSNGAGTVGFLSNLQRTNVALTRAKHCLWIVGNGTTLFNSNSVWQKIVKDTRDRGCFF 1092
Query: 862 NADEERNLAKARLEVSKELVEIGAESLTSTSQGGK 896
NA +E+ L A + + E A++L Q G+
Sbjct: 1093 NATDEKELLNAIFKPAVEYPH--ADNLAKHEQHGQ 1125
>gi|15240130|ref|NP_198532.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
gi|332006765|gb|AED94148.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
Length = 871
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 326/901 (36%), Positives = 480/901 (53%), Gaps = 140/901 (15%)
Query: 33 SWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPYAQ 92
SWSL+DI ++ K+++ IP+ F SV +Y FV LLEETR +L S ++ ++P ++
Sbjct: 24 SWSLKDILNEDLSKEKIMTIPDRFSSVDEYSQCFVPHLLEETRTELFSSFRSLSKSPVSR 83
Query: 93 VIAFEELKPYGTNQYGIEVDYWRNTI-----SNSGKEPYKTLPGDILVLADF-----KPE 142
+++ E + + I+ W + I ++ E Y+ GDI+ L+ +P
Sbjct: 84 ILSVETKVIEYSGRSSIK---WFHDIKLMDYADDKNEIYEPKCGDIIALSPLSLTEERP- 139
Query: 143 KVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFF-IYLTNI 201
++ DL + + F +V D K+ + + K +F ++L NI
Sbjct: 140 RIDDLDPLLLGYVF----SVYGDS---------KISVHFSRSISQSEKHTFCTGVFLINI 186
Query: 202 LPNKRIWNSLHM-CGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSF-SSTLNE 259
N RIWN+LH + +I VL D+ E+C C G ++ S+ LN
Sbjct: 187 TTNTRIWNALHKDAADSTLIQSVLQEDASATEQCFSCENDVDGSDSDRVVDIIRSAKLNS 246
Query: 260 SQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAI 319
SQ A+L L+ +C H+ V+LIWGPPGTGKTKTV+ LL TL+++KC+T+ C PTN I
Sbjct: 247 SQEAAILGFLKTRNCKHKESVKLIWGPPGTGKTKTVATLLSTLMQLKCKTVVCAPTNTTI 306
Query: 320 TELASRVLKLVKESYKRDSRSNTPICP-----------------------LGDILLFGNK 356
+ASR+L L KE+ + +N+ I +G+I+L GN+
Sbjct: 307 VAVASRLLSLSKETIVC-APTNSAIAEVVSRFEFSTLFYGTSILERTTYGMGNIVLSGNR 365
Query: 357 DRLKV--NPGFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKE 414
+R+ + N ++ N R+ KL F GW+ S+ID LE+ ++Y +V +L
Sbjct: 366 ERMGITSNKVLLNVFFNDRVSKLGRLFLSTCGWKKRLESIIDFLENTETKYEQHVNEL-- 423
Query: 415 REDCNVNQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYIS 474
E + TE K + + + ++E V + + THLPKS+IS
Sbjct: 424 ------------ELERMTEDEKKKEEVEERTMQE------VDMAD----LSTHLPKSFIS 461
Query: 475 ENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRR 534
+ ++A A R RY LQ + R
Sbjct: 462 SKDVKNLIA---------------------------------ACQALHRVRYFLQENSSR 488
Query: 535 SE---------CLSVLRNLWNSLDELNLPCTTSKLV----------LEDFCFKRASLFFS 575
+ C N S+D L C K + FC + A + F
Sbjct: 489 DDFKKGGFRFNCF----NKLISVDALQALCLLPKCFGIFGLANNEDIRKFCLQNADIIFC 544
Query: 576 TASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESK 635
TASS ++ I ++ LV+DE AQLKE ES LQL G+ HA+LIGDE QLPAMV ++
Sbjct: 545 TASSVANINPARIGSVDLLVVDETAQLKECESVAALQLPGLCHALLIGDEYQLPAMVHNE 604
Query: 636 ISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYE 695
D+A FGRSLFERL + HSKHLLN+QYRMHPSIS FPN +FY +I D ANV+ YE
Sbjct: 605 ECDKAKFGRSLFERLVLIGHSKHLLNVQYRMHPSISRFPNKEFYGGRITDAANVQESIYE 664
Query: 696 KQYLTGTEFGTYSFINIIGGREDF-IYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIG 754
K++L G FGT+SFIN+ G+E+F HS +N+VEV+ + KI+ L+K KQK+S+G
Sbjct: 665 KRFLQGNMFGTFSFINVGRGKEEFGDGHSPKNMVEVAVISKIISNLFKVSSQRKQKMSVG 724
Query: 755 VVSPYTAQVVAIRKKIGFEYEN---KDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSI 811
V+SPY QV AI++++G +Y + FT+ V+S+DGFQGGE D+IIISTVRCN G++
Sbjct: 725 VISPYKGQVRAIQERVGDKYNSLSVDQLFTLNVQSVDGFQGGEVDVIIISTVRCNVNGNV 784
Query: 812 GFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAK 871
GF+S QR NVALTRARHCLW++G+ TL S SIW L+ +++ R CF++A +++NL
Sbjct: 785 GFLSNRQRANVALTRARHCLWVIGNGTTLALSGSIWAELISESRTRGCFYDAVDDKNLRD 844
Query: 872 A 872
A
Sbjct: 845 A 845
>gi|297805252|ref|XP_002870510.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316346|gb|EFH46769.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 818
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 331/855 (38%), Positives = 490/855 (57%), Gaps = 59/855 (6%)
Query: 49 VEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPYAQVIAFEELKPYGTNQ-- 106
++ IP+ F+SV +Y FV LLEETR +L S +++ +AP Q+ + E + G++
Sbjct: 1 MKTIPDRFRSVDEYLQCFVPHLLEETRTELFSSFKSLSKAPVFQICSVETKEASGSSSNK 60
Query: 107 --YGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPD 164
Y I++ TI + Y+ GD++ L +P ++ L + ++ +
Sbjct: 61 FFYDIKISNALGTIGAN----YQPKCGDLIALTKERPRRIDVLNPL-----LLAYVSSDY 111
Query: 165 DEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWNSLH-MCGNWKVITQV 223
D + +R N Q+ + + + F ++L N+ N RIWN+LH N +I V
Sbjct: 112 DLIISVHSSRSISYHELNHQLEETSLQ--FGVFLMNLTTNTRIWNALHNEAANSTLIKSV 169
Query: 224 LGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELI 283
L +++ E+ C+ G D S+ LN SQ A+L+CL+ +C H+ V+LI
Sbjct: 170 LQENTLATEQYVCCANGADGS-DRVSDIIRSAKLNSSQEAAILSCLKTRNCIHKHSVKLI 228
Query: 284 WGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTP 343
WGPPGTGKTKTV+ LL LL++KC+T+ C PTN AI E+ SR + L KE+ S
Sbjct: 229 WGPPGTGKTKTVATLLFCLLKLKCKTVVCAPTNTAIVEVTSRPMSLFKET----SSPEHS 284
Query: 344 ICPLGDILLFGNKDRL--KVNPGFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDC 401
LG+I+L GN+ R+ K N +++L+ RI L F+P SGW+ S+I+ LE+
Sbjct: 285 TYGLGNIVLSGNRARMGIKENDVLLDVFLDERIGILANLFSPTSGWKQRLESLINFLENT 344
Query: 402 VSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCI 461
++Y YV+ LKE E + + EK+ + + GE +V++ F L I
Sbjct: 345 EAKYEHYVDLLKEVE--TMREEAEKKAKAVKILTFGE------FVKKTFDGFSEELEKNI 396
Query: 462 FIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKL-FSHSVDEGISWA 520
THLPKS++S + MVA + +L L Q+N +L+K F + IS
Sbjct: 397 VDLYTHLPKSFVSSEQVESMVAARQVLQRVRYFL-QENFSRYDLKKGGFKFDCFKRISAD 455
Query: 521 FVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSS 580
V+ L+L +R E +L N + FC + A + F TAS +
Sbjct: 456 CVQT---LRLLPQRFEISDLLENKDT----------------KTFCLQNADIIFCTASGA 496
Query: 581 YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEA 640
++ V ++ LV+DEAAQLKE ES LQL+G+ HAVLIGDE QLPAM+ +I ++A
Sbjct: 497 ADMNPVRTGSIDLLVVDEAAQLKECESVAALQLSGLRHAVLIGDELQLPAMMW-QICEKA 555
Query: 641 GFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLT 700
FG SLFERL L H+KH LN+QYRMHPSIS FPN +FY +I D ANV+ Y+K++L
Sbjct: 556 KFGSSLFERLVLLGHNKHFLNVQYRMHPSISRFPNKEFYGGKIKDAANVQESIYQKRFLQ 615
Query: 701 GTEFGTYSFINIIGGREDF-IYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPY 759
G FG++SFIN+ G E+F HS +N+VEV+ + +I+ L+K + K+S+GVVSPY
Sbjct: 616 GNMFGSFSFINVGLGEEEFGDGHSPKNMVEVAVISEIISSLFKVSSERRIKMSVGVVSPY 675
Query: 760 TAQVVAIRKKIGFEYENKDG--FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKP 817
QV AI+++ +Y + G FT+ V+S+DGFQGGEED+IIISTVR N G +GF++
Sbjct: 676 KGQVRAIQERTKNKYSSLSGELFTLNVRSVDGFQGGEEDVIIISTVRSNGNGKVGFLNNR 735
Query: 818 QRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVS 877
QR NVALTRARHCLW++G+E TL S SIW L+ +++ R CF++A +E+NL R +S
Sbjct: 736 QRANVALTRARHCLWVVGNETTLALSGSIWAKLISESRTRGCFYDATDEKNL---RDSMS 792
Query: 878 KELVEIGAESLTSTS 892
L+E + S S S
Sbjct: 793 DALLEDVSSSFGSLS 807
>gi|242076912|ref|XP_002448392.1| hypothetical protein SORBIDRAFT_06g026440 [Sorghum bicolor]
gi|241939575|gb|EES12720.1| hypothetical protein SORBIDRAFT_06g026440 [Sorghum bicolor]
Length = 887
Score = 511 bits (1315), Expect = e-141, Method: Compositional matrix adjust.
Identities = 331/804 (41%), Positives = 461/804 (57%), Gaps = 74/804 (9%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
V SW+L+D+ ++ FKD+V+KIP +F +K Y + PLLEE R ++ S LE++ P
Sbjct: 33 VLSWNLKDVMNEDLFKDKVKKIPSTFPHLKSYLECYTSPLLEELRAEMSSSLESLSTVPS 92
Query: 91 AQVIAFEELKPYGTNQYGIEV--DYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLR 148
++ EE K ++Y I V D N E Y GDI+VL+D KP +SD+
Sbjct: 93 VRISQIEEKK----DRYEISVASDCQAAKPCNH-PECYAPSVGDIIVLSDAKPGHISDIT 147
Query: 149 RVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQV-----HDKTKKSFFFIYLTNILP 203
R GR + V+ T DED++ +Y + A + D S F L NI+
Sbjct: 148 RNGRPYR-VAFVTDGGDEDDDSPPAKYTIIASGKIDAADGGCQDGKSTSLFAACLLNIVT 206
Query: 204 NKRIWNSLHMCG----NWKVITQVLGTDSVVDERCELCSVQRKGQWD--EKFGPSFSSTL 257
RIW L N +I +++ V D C+ S + G D E + + L
Sbjct: 207 YIRIWRCLDYEAAVRRNQGLIQKMVQYQPVPDT-CQKKSTEDAGSIDSVEIWTKLSTMDL 265
Query: 258 NESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNV 317
N SQ A+L + ++ C S LIWGPPGTGKTKT+S+LL + +K TL C PTN+
Sbjct: 266 NTSQNDAVLNSISKMHC-KSSTFTLIWGPPGTGKTKTISVLLWLMREMKHGTLVCAPTNL 324
Query: 318 AITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKL 377
AI ++ASR LK+++E + D+R LGD+LL GNK R+ V+ +EIYL+ R++KL
Sbjct: 325 AIKQVASRFLKVIQE-HSVDTRC------LGDVLLIGNKQRMCVDGDLKEIYLHDRVRKL 377
Query: 378 RECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKG 437
CFAPL+GW+H SS+ + E+ SQY L+ ED NQ EG
Sbjct: 378 LGCFAPLTGWKHHLSSLSEFFENGYSQY------LQHLED---NQ----------EGDT- 417
Query: 438 ERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQ 497
PF Y R+RF V LR C H+PKS I E ++ +++L +L+ F N +FQ
Sbjct: 418 ---PFFSYSRKRFASIYVDLRRCFKELLLHVPKSSILEVNYNNILSLLEMLEEF-NRMFQ 473
Query: 498 DNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTT 557
+ ++++F + DE ++ L + R +CL L L L L LP +
Sbjct: 474 WKYIGDAIKEVFLYINDEPDH----TNSSVITLGKMRIKCLEKLNTL---LSCLKLPLIS 526
Query: 558 SKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGIN 617
SK + DFC + AS+ F T S+S K+ + K L LV+DEAAQLKE E+ IPL+L +
Sbjct: 527 SKRTIRDFCIESASIIFCTVSTSTKV--ITNKKLELLVVDEAAQLKECETLIPLRLWTLK 584
Query: 618 HAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQ 677
HAVLIGDECQLPA V+SK+ +A FGRSLFERL+SL H KHLLN+QYRMHPSIS+FPN
Sbjct: 585 HAVLIGDECQLPATVKSKVCTDALFGRSLFERLSSLGHEKHLLNMQYRMHPSISIFPNSN 644
Query: 678 FYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRE--DFIYHSCRNIVEVSAVIK 735
FY +I D ++ K +E+ YL + +G YSF+NI GRE D + HS RN VEV+ + +
Sbjct: 645 FYEGRISDAPSLMEKVHERMYLPSSMYGPYSFVNIGDGREERDELGHSKRNFVEVAVIEE 704
Query: 736 ILQKLYKAWVG-------SKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDG-FTVKVKSI 787
IL +L + +++KV++GV+ PYTAQVVAI KIG + K G VK+ S+
Sbjct: 705 ILYRLRRGTCSLFTTCFKTQKKVTVGVICPYTAQVVAIEGKIG---KIKFGPLQVKINSV 761
Query: 788 DGFQGGEEDIIIISTVRCNTGGSI 811
DGFQGGEEDIII+STVR N+GG +
Sbjct: 762 DGFQGGEEDIIILSTVRSNSGGMV 785
>gi|297809575|ref|XP_002872671.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318508|gb|EFH48930.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 815
Score = 507 bits (1306), Expect = e-140, Method: Compositional matrix adjust.
Identities = 329/854 (38%), Positives = 480/854 (56%), Gaps = 93/854 (10%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
+F+WS+ I ++ +K++++ IP+ F SV +Y FV LLEETR +L S L ++ +AP
Sbjct: 13 IFAWSINYILNKDIYKEEIKSIPDRFWSVDEYLNCFVPLLLEETRTELSSSLNSLWKAPV 72
Query: 91 AQVIAFE----ELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADF-KPEKVS 145
+ + E +L +N+ I +++ + Y+ GD++ L +P +V
Sbjct: 73 FYISSVEATAIKLPSRSSNKVNIS---GLTSVAQGNRTSYEPKHGDLIALTKAARPTRVD 129
Query: 146 DLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFF---IYLTNIL 202
DL + + F +V D E + V + + + ++ F F ++L N+
Sbjct: 130 DLNPLILGYVF----SVED-------ELHFSVHSSKTISIDEQ----FSFRSGVFLMNLT 174
Query: 203 PNKRIWNSLHMC-GNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQ 261
N RIW +LH GN +I VL ++ E WD S+ LN SQ
Sbjct: 175 TNTRIWKALHNGDGNLGLIKSVLQANTADTEHPVSSRNWGNSVWD----IMRSAKLNPSQ 230
Query: 262 VGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITE 321
A+L+CL + ++ V+LIWGPPGTGKTKTV+ LL LL + C+T+ C PTN A+ E
Sbjct: 231 ESAILSCLETRNLRDKTSVKLIWGPPGTGKTKTVATLLFALLNLSCKTVVCAPTNTAVVE 290
Query: 322 LASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKV----NPGFEEIYLNYRIKKL 377
+ASR+L L KE+ S S LG+I+L GN+ R+ + N ++L +RI KL
Sbjct: 291 VASRLLALFKET----SSSEHSTYGLGNIVLVGNRVRMGIDDRGNDDLLNVFLEHRISKL 346
Query: 378 RECFAPLSGWRHCFSSMIDLLEDCVSQYHIYV---EKLKEREDC-NVNQSEEKECRKETE 433
R+ F+P +GW S+ID+LE+ S Y Y+ E+ + +ED N+ + + K
Sbjct: 347 RKLFSPSTGWERSLESIIDILENSESNYKKYLLLNERREIKEDGKNILTTFGEFVMKMFL 406
Query: 434 GSKGERK------------PFLKYVRERFKC---AVVSLRNCIFIFCTHLPKSYISENSF 478
GS ER F ++V++ + + ++ + THLPKS+ S N
Sbjct: 407 GSN-ERSEKEEAEKKEKILTFGEFVKKNYYGLSETMGKVQKDMVDLYTHLPKSFTSSNDV 465
Query: 479 QEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECL 538
+ M+A + L + L EK S + D F + + +CL
Sbjct: 466 KNMIAARKALRRARSFL---------QEKQGSFTFD-----CFNKVISI--------DCL 503
Query: 539 SVLRNLWNSLDELNLPCTTSKLVLED---FCFKRASLFFSTASSSYKLHSVEIKPLNFLV 595
LR L + +P LV ED FC + A + F TAS + ++ + + LV
Sbjct: 504 QTLRLLSKRFE---IPAL---LVNEDTRTFCLQNAHIIFCTASGAAEMTAERTGSIELLV 557
Query: 596 IDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNH 655
+DEAAQLKE ES LQ+ G++HAVLIGDE QLPAMV+S++ ++A FGRSLFERL L H
Sbjct: 558 VDEAAQLKECESVAALQIQGLHHAVLIGDELQLPAMVQSEVCEKAKFGRSLFERLVLLGH 617
Query: 656 SKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGG 715
KHLLN+QYRMH SISLFPN++FY +I D VK +Y+K++L G FG++SFIN+ G
Sbjct: 618 KKHLLNVQYRMHTSISLFPNMEFYDGKISDAEIVKESTYQKRFLRGNMFGSFSFINVGLG 677
Query: 716 REDF-IYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEY 774
+E+F HS +N+VEV+ V +IL L K +K K+S+GV+SPY AQV AI+++IG +Y
Sbjct: 678 KEEFGDGHSPKNMVEVAVVSEILSNLLKVSSEAKTKMSVGVISPYKAQVRAIQERIGDKY 737
Query: 775 ENKDG--FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLW 832
+ FT+ V+S+DGFQGGEEDIIIISTVR N G IGF+S QR NVALTRARHCLW
Sbjct: 738 TSVSDQLFTLNVRSVDGFQGGEEDIIIISTVRNNGNGHIGFLSNRQRANVALTRARHCLW 797
Query: 833 ILGSERTLISSESI 846
++G+ERTL S SI
Sbjct: 798 VIGNERTLSLSGSI 811
>gi|242076908|ref|XP_002448390.1| hypothetical protein SORBIDRAFT_06g026425 [Sorghum bicolor]
gi|241939573|gb|EES12718.1| hypothetical protein SORBIDRAFT_06g026425 [Sorghum bicolor]
Length = 895
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 328/906 (36%), Positives = 482/906 (53%), Gaps = 119/906 (13%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
V SWS++D+F++ F+++V++IPE+F S K YFGSF +PL+EE S L+ +
Sbjct: 33 VLSWSVDDVFNRDLFREKVKRIPETFASSKSYFGSFSYPLIEEVHADFFSSLDGCGHQSF 92
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRV 150
QV E+L ++ + R +E Y+ DILVL+ KP++VSDL R
Sbjct: 93 IQVTQMEKLH-VADDKIFLCFKVARPVEDERSREIYEPSEDDILVLSSRKPKQVSDLTRN 151
Query: 151 GRTWTFVSVTTVPDDEDE-------NKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILP 203
+++ + +D+D+ + + V+A ++ K+ F + L N+
Sbjct: 152 VKSYILAKIVKGGEDDDDLPPDCFIARLSSELTVEADPVTRI---PKEQLFAVVLVNMKT 208
Query: 204 NKRIWNSLHMCGNWKV--------------ITQVLGT------DSVVDERCELCSVQRK- 242
RIW L M N V ++ V+ + D + + + C R
Sbjct: 209 YNRIWTCLDMGKNHTVDIVWQYKSKVYSFSLSHVMDSLKAVKWDMLKNSQASRCFPDRSI 268
Query: 243 -GQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
G E F LN SQ+ A+ C+ + S V+LIWGPPGTG
Sbjct: 269 DGLGLENF------RLNTSQLNAVADCVP-VTGKFSSSVKLIWGPPGTG----------- 310
Query: 302 LLRIKCRTLACTPTNVAITELASRVLKLVKE-SYKRDSRSNTPICPLGDILLFGNKDRLK 360
RTLAC PTN A+ E+ASR++ LV E + RD L DI+LFGNK R+K
Sbjct: 311 ------RTLACAPTNTAVLEVASRIVNLVHEFAASRD-------ILLSDIVLFGNKKRMK 357
Query: 361 VNPGFE--EIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYH-IYVEKLKERED 417
++ + I+L+ R ++L +CFA W SS++ LE V++ H +Y E++
Sbjct: 358 IDEDHDLCTIFLSSRTQRLSKCFAK-KPWSLYLSSLVHFLEKSVAEQHQLYTERVL---- 412
Query: 418 CNVNQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENS 477
TE P ++VR F L NC+ + T P+S S
Sbjct: 413 --------------TEKQTLVILPLNEFVRATFNELAEDLFNCMEVLQTDFPRSPTMGQS 458
Query: 478 FQEMVALKSLLDSFGNLLF-----------------QDNVVSKELEKLFSHSVDEGISWA 520
FQ M + LL+ + QDN +K + L S +E +
Sbjct: 459 FQCMTDVTELLNILHTYINSDDDDVWLDGLLEEQIKQDNDPAKWPDLLASVHAEECLKSK 518
Query: 521 FVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSS 580
F + R L C+ L+ L L+ + + + ++A T SSS
Sbjct: 519 FRKARSL---------CIQELQYLSKHLELPFWIYYDYERDIRMYLLQKARCILCTVSSS 569
Query: 581 YKLHSVEI----KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKI 636
+ L++V + PL L++DEAAQLKE E+ IP+ L I AV IGDECQLPA+V+SKI
Sbjct: 570 FSLYNVPVDKDTSPLQMLIVDEAAQLKECETLIPMLLPSIRQAVFIGDECQLPALVKSKI 629
Query: 637 SDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK 696
S+ A FGRS+FERL+SL ++KHLL++QYRMHP IS FP FY +++ DG NV K+YE+
Sbjct: 630 SENAYFGRSVFERLSSLEYNKHLLSVQYRMHPEISKFPVANFYDSKVSDGPNVVCKNYER 689
Query: 697 QYLTGTEFGTYSFINIIGGREDFIYHS--CRNIVEVSAVIKILQKLYKAWVGSKQKVSIG 754
++L G FG+YSFIN+ GG E HS +N +EV+AV+ I+++L++ V + K+S+G
Sbjct: 690 KFLPGKMFGSYSFINVEGGHETTEKHSQSLKNTIEVAAVLWIVKRLFEESVLTGTKLSVG 749
Query: 755 VVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFI 814
VVSPY AQV AI++K+G + +GF+VKVKS+DGFQG EEDIII+STVR N GS+GF+
Sbjct: 750 VVSPYNAQVRAIQEKLGKSCDMYEGFSVKVKSVDGFQGAEEDIIIMSTVRSNGDGSVGFL 809
Query: 815 SKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARL 874
+ QR NVALTRA+HCLWI+G+ TL S S+W +V DA AR C F+A + ++L+ A +
Sbjct: 810 TNLQRTNVALTRAKHCLWIVGNVTTLAQSRSVWQRIVKDAMARGCLFDASDNKDLSNALV 869
Query: 875 EVSKEL 880
EL
Sbjct: 870 NAIIEL 875
>gi|10177997|dbj|BAB11370.1| unnamed protein product [Arabidopsis thaliana]
Length = 701
Score = 500 bits (1288), Expect = e-138, Method: Compositional matrix adjust.
Identities = 298/714 (41%), Positives = 422/714 (59%), Gaps = 42/714 (5%)
Query: 194 FFIYLTNILPNKRIWNSLH-MCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPS 252
F ++L N+ N RIWN+LH N +I VL +++ E+C +C G D
Sbjct: 17 FGVFLMNLTTNTRIWNALHNEAANSTLIKSVLQENTLTTEQC-VCESGAHGS-DRVTNII 74
Query: 253 FSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLAC 312
S+ LN SQ A+L+CL+ +C H+ V+LIWGPPGTGKTKTV+ LL LL++ C+T+ C
Sbjct: 75 RSAKLNSSQEAAILSCLKIRNCNHKHSVKLIWGPPGTGKTKTVATLLFCLLKLSCKTVVC 134
Query: 313 TPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRL--KVNPGFEEIYL 370
PTN AI E+ SR+L L K S S LG+I+L GN+ R+ K N +++L
Sbjct: 135 APTNTAIVEVTSRLLSLFKTSSSEHSTYG-----LGNIVLSGNQARMGIKENDVLLDVFL 189
Query: 371 NYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRK 430
+ RI L F+P SGW+ S+ID LE+ ++Y YV LKE E SEE E +K
Sbjct: 190 DERIGILTSLFSPTSGWKQRLESLIDFLENTEAKYEHYVHLLKEVE----RMSEEAEKKK 245
Query: 431 ETEGSKGERKPFL---KYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSL 487
+ K + L ++V++ F L + THLPKS+I+ + + MV +
Sbjct: 246 KGADKKPKAIKILTFGEFVKKTFDGFSEELEKGMVDLWTHLPKSFITSENVKSMVTARKA 305
Query: 488 LDSFGNLLFQDNVVSKELEKLFSHSVD--EGISWAFVRKRYLLQLHQRRSECLSVLRNLW 545
L L ++ S++ K S D G+S + CL +LR L
Sbjct: 306 LQRVRYFLKEN--FSRDDFKKGSLKFDCFNGVS----------------AYCLQILRLLP 347
Query: 546 NSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKES 605
+ ++ + FC + A + F TAS + ++ + ++ LV+DEAAQLKE
Sbjct: 348 ERFEVSDMLENNDT---KTFCLQNADIIFCTASGAADMNPIRTGSVDLLVVDEAAQLKEC 404
Query: 606 ESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYR 665
ES LQL+G+ HAVLIGDE QLPAMV ++I ++A FGRSLFERL L H+KHLLN+QYR
Sbjct: 405 ESVAALQLSGLRHAVLIGDELQLPAMVHNEICEKAKFGRSLFERLVLLGHNKHLLNVQYR 464
Query: 666 MHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDF-IYHSC 724
MHPSIS FPN +FY +I D ANV+ Y+K++L G FG++SFIN+ G E+F HS
Sbjct: 465 MHPSISRFPNKEFYGGRIKDAANVQESIYQKRFLQGNMFGSFSFINVGRGEEEFGDGHSP 524
Query: 725 RNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDG-FTVK 783
+N+VEV+ + +I+ L+K + K+S+GVVSPY QV AI+++ +Y + G FT+
Sbjct: 525 KNMVEVAVISEIISNLFKVSSERRIKMSVGVVSPYKGQVRAIQERTTNKYSSLSGLFTLN 584
Query: 784 VKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISS 843
V+S+DGFQGGEEDIIIISTVR N G +GF++ QR NVALTRARHCLW++G+E TL S
Sbjct: 585 VRSVDGFQGGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCLWVIGNETTLALS 644
Query: 844 ESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAESLTSTSQGGKK 897
S W L+ +++ CF++A +E+NL A E E V SL+ + GK+
Sbjct: 645 GSSWAKLISESRTLGCFYDAADEKNLRDAMNEALLEDVSTSFGSLSIRNGYGKR 698
>gi|15242273|ref|NP_200022.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
gi|10177744|dbj|BAB11057.1| unnamed protein product [Arabidopsis thaliana]
gi|332008787|gb|AED96170.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
Length = 676
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 282/677 (41%), Positives = 401/677 (59%), Gaps = 42/677 (6%)
Query: 204 NKRIWNSLHMCGNWKVITQ-VLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQV 262
N RIWN+LH + +T+ VL ++ E+C CS + G+ D S+ LN SQ
Sbjct: 6 NTRIWNALHNEADISTLTKSVLQANTEGTEQC-FCS-ENDGRSDLVLDIIRSTKLNSSQE 63
Query: 263 GAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITEL 322
A+L CL +C H++ V+LIWGPP TGKTKTV+ LL LL+++C+T+ C PTN AI ++
Sbjct: 64 DAILGCLETRNCTHKNSVKLIWGPPRTGKTKTVATLLFALLKLRCKTVVCAPTNTAIVQV 123
Query: 323 ASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPG---FEEIYLNYRIKKLRE 379
SR+L L KE +S + LG+I+L GN+DR+ +N +++L+ RI KL +
Sbjct: 124 TSRLLSLFKE----NSTAENATYRLGNIILSGNRDRMGINKNDHVLLDVFLDERIGKLGK 179
Query: 380 CFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGER 439
F+P SGW S+I LE+ +Y +V +L+E E N E+
Sbjct: 180 LFSPFSGWMQRLESLIQFLENPEGKYERHVYELEEVERMNEEDEREE--------VVVNI 231
Query: 440 KPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDN 499
F ++V++ F ++ CI THLPK Y+ ++M+A + L L ++
Sbjct: 232 PTFGEFVQKNFNSLSEEVKTCIVDLYTHLPKVYLPYEDVKKMIASRQTLQRIRYFLREN- 290
Query: 500 VVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSE-CLSVLRNLWNSLDELNLPCTTS 558
S VD F + +R S+ CL LR L + +P
Sbjct: 291 ----------SSRVD------FEEGNFRFDCFKRLSDDCLKALRLLPKRFE---IPDMLE 331
Query: 559 KLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINH 618
+ FC + A + TAS + +++ + LV+DEAAQLKE ES LQL G+ H
Sbjct: 332 NEDIRKFCLQNADIILCTASGAAEMNVERTGNVELLVVDEAAQLKECESVAALQLPGLRH 391
Query: 619 AVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQF 678
A+LIGDE QLPAMV +++ ++A FGRSLFERL L H+KHLL++QYRMHPSIS FPN +F
Sbjct: 392 AILIGDEFQLPAMVHNEMCEKAKFGRSLFERLVLLGHNKHLLDVQYRMHPSISRFPNKEF 451
Query: 679 YRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDF-IYHSCRNIVEVSAVIKIL 737
Y +I D NVK Y+K++L G F ++SFIN+ G+E+F HS +N+VEV+ + +I+
Sbjct: 452 YGGRIKDAENVKESIYQKRFLKGNMFDSFSFINVGRGKEEFGDGHSPKNMVEVAVISEII 511
Query: 738 QKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDG--FTVKVKSIDGFQGGEE 795
LYK + KVS+GVVSPY Q+ AI++KIG +Y + G FT+ V+S+DGFQGGEE
Sbjct: 512 SNLYKVSCERRMKVSVGVVSPYKGQMRAIQEKIGDKYSSLSGQQFTLNVRSVDGFQGGEE 571
Query: 796 DIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAK 855
DIIIISTVR N G +GF++ QR NVALTRARHCLW++G+E TL S SIW L+ +++
Sbjct: 572 DIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCLWVIGNETTLALSGSIWATLISESR 631
Query: 856 ARQCFFNADEERNLAKA 872
R CF +A +E NL A
Sbjct: 632 TRGCFHDATDEMNLRDA 648
>gi|15240114|ref|NP_198530.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
gi|332006763|gb|AED94146.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
Length = 692
Score = 495 bits (1274), Expect = e-136, Method: Compositional matrix adjust.
Identities = 297/714 (41%), Positives = 419/714 (58%), Gaps = 46/714 (6%)
Query: 194 FFIYLTNILPNKRIWNSLH-MCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPS 252
F ++L N+ N RIWN+LH N +I VL +++ E+C +C G D
Sbjct: 12 FGVFLMNLTTNTRIWNALHNEAANSTLIKSVLQENTLTTEQC-VCESGAHGS-DRVTNII 69
Query: 253 FSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLAC 312
S+ LN SQ A+L+CL+ +C H+ V+LIWGPPGTGKTKTV+ LL LL++ C+T+ C
Sbjct: 70 RSAKLNSSQEAAILSCLKIRNCNHKHSVKLIWGPPGTGKTKTVATLLFCLLKLSCKTVVC 129
Query: 313 TPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKV--NPGFEEIYL 370
PTN AI E+ SR+L L K S S LG+I+L GN+ R+ + N +++L
Sbjct: 130 APTNTAIVEVTSRLLSLFKTSSSEHSTYG-----LGNIVLSGNQARMGIKENDVLLDVFL 184
Query: 371 NYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRK 430
+ RI L F+P SGW+ S+ID LE+ ++Y YV LKE E SEE E +K
Sbjct: 185 DERIGILTSLFSPTSGWKQRLESLIDFLENTEAKYEHYVHLLKEVE----RMSEEAEKKK 240
Query: 431 ETEGSKGERKPFL---KYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSL 487
+ K + L ++V++ F L + THLPKS+I+ + + MV +
Sbjct: 241 KGADKKPKAIKILTFGEFVKKTFDGFSEELEKGMVDLWTHLPKSFITSENVKSMVTARKA 300
Query: 488 LDSFGNLLFQDNVVSKELEKLFSHSVD--EGISWAFVRKRYLLQLHQRRSECLSVLRNLW 545
L L ++ S++ K S D G+S + CL +LR L
Sbjct: 301 LQRVRYFLKEN--FSRDDFKKGSLKFDCFNGVS----------------AYCLQILRLLP 342
Query: 546 NSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKES 605
+ ++ + FC + A + F TAS + ++ + ++ LV+DEAAQLKE
Sbjct: 343 ERFEVSDMLENNDT---KTFCLQNADIIFCTASGAADMNPIRTGSVDLLVVDEAAQLKEC 399
Query: 606 ESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYR 665
ES LQL+G+ HAVLIGDE QLPAMV +EA FGRSLFERL L H+KHLLN+QYR
Sbjct: 400 ESVAALQLSGLRHAVLIGDELQLPAMVH----NEAKFGRSLFERLVLLGHNKHLLNVQYR 455
Query: 666 MHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFI-YHSC 724
MHPSIS FPN +FY +I D ANV+ Y+K++L G FG++SFIN+ G E+F HS
Sbjct: 456 MHPSISRFPNKEFYGGRIKDAANVQESIYQKRFLQGNMFGSFSFINVGRGEEEFGDGHSP 515
Query: 725 RNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDG-FTVK 783
+N+VEV+ + +I+ L+K + K+S+GVVSPY QV AI+++ +Y + G FT+
Sbjct: 516 KNMVEVAVISEIISNLFKVSSERRIKMSVGVVSPYKGQVRAIQERTTNKYSSLSGLFTLN 575
Query: 784 VKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISS 843
V+S+DGFQGGEEDIIIISTVR N G +GF++ QR NVALTRARHCLW++G+E TL S
Sbjct: 576 VRSVDGFQGGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCLWVIGNETTLALS 635
Query: 844 ESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAESLTSTSQGGKK 897
S W L+ +++ CF++A +E+NL A E E V SL+ + GK+
Sbjct: 636 GSSWAKLISESRTLGCFYDAADEKNLRDAMNEALLEDVSTSFGSLSIRNGYGKR 689
>gi|297805244|ref|XP_002870506.1| hypothetical protein ARALYDRAFT_493692 [Arabidopsis lyrata subsp.
lyrata]
gi|297316342|gb|EFH46765.1| hypothetical protein ARALYDRAFT_493692 [Arabidopsis lyrata subsp.
lyrata]
Length = 867
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 324/878 (36%), Positives = 480/878 (54%), Gaps = 96/878 (10%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
V SWS++DI ++ +K++++ IP+ F SV +YF FV LLEETR +L S ++ +AP
Sbjct: 22 VCSWSIKDILNEDLYKEKLKTIPDRFSSVDEYFQCFVPHLLEETRTELFSSFISLSKAPV 81
Query: 91 AQVIAFEELKPY---GTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDL 147
++++ E K Y G + + D ++ E Y+ GDI+ L+ P +++
Sbjct: 82 CRILSVET-KIYEFSGRSSIKMFHDIKLMDYADDKSEKYEPKCGDIIALS---PLSLTEE 137
Query: 148 R-RVG--RTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSF-FFIYLTNILP 203
R R+ V +V D YK+ + + K SF I+L +
Sbjct: 138 RPRIDYLNPLLLGYVFSVFGD---------YKISVHFSRSISQSEKHSFRSGIFLMTLTT 188
Query: 204 NKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSF-SSTLNESQV 262
N RIWN+LH +V L + E+C C G + S+ LN SQ
Sbjct: 189 NTRIWNALHN----EVADSTLIQSAT--EQCFSCGNDDDGSDSDSVLDRIRSAKLNSSQE 242
Query: 263 GAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITEL 322
A+ CL+ +C H+ V+LIWGPPG KT+ ++ LL L+++KC+T+ C PTN AI +
Sbjct: 243 AAIFGCLKTRNCNHKKSVKLIWGPPG-AKTQDITTLLSALIQLKCKTVVCAPTNTAIVAV 301
Query: 323 ASRVLKLVKESYKRDSRSNTPICP---------------------LGDILLFGNKDRLKV 361
ASR+L L KE+ + +N+ I +G+I+L GN++R+ +
Sbjct: 302 ASRLLALSKETIV-CAPTNSAIAEVVSRFSSLFYGTSILERTTYGMGNIVLSGNRERMGI 360
Query: 362 --NPGFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCN 419
N ++ N R+ KL F GW+ S+ID LE+ ++Y +V +L+E
Sbjct: 361 KNNKVLLNVFFNDRVSKLGRLFLSTCGWKKRLESVIDFLENTEAKYEQHVHELEELH--- 417
Query: 420 VNQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQ 479
R E K + K ++ +V L CTHLPKS+IS +
Sbjct: 418 ---------RILEEEKKEDEKKKETEKKKEEAENMVDL-------CTHLPKSFISSKDVK 461
Query: 480 EMVALKSLLDSFGNLLFQDNVVSKELEK--LFSHSVDEGISWAFVRKRYLLQLHQRRSEC 537
M+A + L + L Q+N + +K + ++ IS + LL +C
Sbjct: 462 NMIAARQALHRVRDFL-QENSSRDDFKKGGFRFNCFNKLISVDAIEALCLL------PKC 514
Query: 538 LSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVID 597
+ L N D + FC + A + TASS + I ++ LV+D
Sbjct: 515 FGIF-GLENYED------------IRKFCLQNADIILCTASSVANMVPERIGSVDLLVVD 561
Query: 598 EAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSK 657
EAAQLKE ES LQL G+ HA+LIGDE QLPAMV SK ++A FGRSLFERL + H+K
Sbjct: 562 EAAQLKECESVTALQLPGLRHALLIGDEYQLPAMVHSKECEKAKFGRSLFERLVLIGHNK 621
Query: 658 HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRE 717
HLLN+QYRMHPSIS FPN +FY +I D + V+ + YEK++L G FG++SFIN+ G+E
Sbjct: 622 HLLNVQYRMHPSISCFPNKEFYDGRITDASIVQERIYEKRFLQGKMFGSFSFINVGRGKE 681
Query: 718 DFI-YHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYEN 776
+F HS +N+VEV+ + +I+ L+K QK+S+GV+SPY QV AI+++IG +Y +
Sbjct: 682 EFCDGHSPKNMVEVAVISEIISNLFKVSSLRNQKMSVGVISPYKGQVRAIQERIGDKYGS 741
Query: 777 KDG--FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWIL 834
G FT+ V+S+DGFQGGEEDIIIISTVR N G++GF+S QR NVALTRARHCLW++
Sbjct: 742 LSGQLFTLNVQSVDGFQGGEEDIIIISTVRSNVNGNVGFLSNHQRANVALTRARHCLWVI 801
Query: 835 GSERTLISSESIWGALVCDAKARQCFFNADEERNLAKA 872
G+E TL S SIW L+ +++ R CF++A +++NL A
Sbjct: 802 GNETTLALSGSIWAELISESRTRGCFYDAVDDKNLRDA 839
>gi|38346802|emb|CAD41370.2| OSJNBa0088A01.9 [Oryza sativa Japonica Group]
Length = 769
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 308/789 (39%), Positives = 438/789 (55%), Gaps = 95/789 (12%)
Query: 48 QVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPYAQVIAFEELKPYGTNQY 107
Q+++IP +F +K Y S+ PLLEE R ++ S LEA+ P ++ E+ K Y
Sbjct: 2 QMKRIPSTFSDLKSYLESYTSPLLEEMRTEMSSSLEAISTMPSTKISWIEQKK--NNKVY 59
Query: 108 GIEVDY-WRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDE 166
I D +N+ + + E Y GDI++L+D KPE +SD+ R GR + V+ T DE
Sbjct: 60 DIVFDADSQNSKACNRPESYVPSVGDIIILSDVKPEHISDITRNGRPY-IVAFVTEGGDE 118
Query: 167 DENKKENRYKVKARNNM-----QVHDKTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVIT 221
D++ +Y + + + + D+ + F YL NI+ RIW C ++ T
Sbjct: 119 DDDSPPVKYVIISSGKIDSEDGKCQDRKEIKLFAAYLLNIVTYIRIWR----CLDYN--T 172
Query: 222 QVLGTDSVVDERCE---LCSVQRKGQWD------EKFGPSFSSTLNESQVGAMLACLRRL 272
V S++ E + + +K + D E + + LN SQ A+L C+ +
Sbjct: 173 AVRRNQSLIQEMVHYPLVADIVQKQKKDHSIDSMEIWSKLSTMDLNNSQNDAILNCISSM 232
Query: 273 DCGHRSGVE-LIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVK 331
+ S LIWGPPGTGKTKT+S+LL + + TL C PTN+A+ ++ASR LK++K
Sbjct: 233 HSNNSSSSFSLIWGPPGTGKTKTISVLLWLMREMDHGTLTCAPTNLAVKQVASRFLKVIK 292
Query: 332 ESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFAPLSGWRHCF 391
ES R LGD+LL GNK R+ V+ +EIYL+ R++ L CF P++GWRH
Sbjct: 293 ESSDRAC--------LGDVLLCGNKQRMCVDGNLKEIYLHDRVRTLLGCFVPMTGWRHRL 344
Query: 392 SSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPFLKYVRERFK 451
SS+ DL E+ SQY Y+E KE G+ F Y R+RF
Sbjct: 345 SSLSDLFENGYSQYQKYLEDQKE----------------------GDSLTFYSYTRKRFN 382
Query: 452 CAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSH 511
LR C H+PKS I E ++ +++L LL+ F N F + + E++ +F +
Sbjct: 383 ATYPELRRCFKEVLFHVPKSTILEVNYNNIISLLELLEDF-NKKFMNKNIEDEVKGIFLY 441
Query: 512 SVDEGISWAFVRKRY---LLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFK 568
+ D+ S ++ + L + R CL +L L +SL LP T+SK + +FC +
Sbjct: 442 NDDQSDSSVSSLTKFSKTAISLGKIRIRCLELLNMLLSSL---KLPITSSKRTIREFCME 498
Query: 569 RASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 628
AS+ F T SSS K+ + + L LV+DEAAQLKE E IPL+L + HA+LIGDECQL
Sbjct: 499 SASIVFCTVSSSSKISNKK---LQLLVVDEAAQLKECEGLIPLRLPTLKHAILIGDECQL 555
Query: 629 PAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
PA V+SK+ ++A FGRSLFERL+SL H KHLLN+QYRMHPSIS+FPN+ FY ++LD N
Sbjct: 556 PATVKSKVCEDASFGRSLFERLSSLGHEKHLLNMQYRMHPSISIFPNISFYDRKLLDAPN 615
Query: 689 VKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSK 748
VK K + K+YL G FG YSF NI ED A +K
Sbjct: 616 VKQKEHRKKYLPGLMFGPYSFFNI----ED------------------------AHSKTK 647
Query: 749 QKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG 808
KV++GV+ PYTAQV+AI++K+G D VK+ S DGFQGGEEDII +STVR N+
Sbjct: 648 NKVTVGVICPYTAQVLAIQQKLG--KMKFDPVIVKINSGDGFQGGEEDIITLSTVRSNSD 705
Query: 809 GSIGFISKP 817
G++GF+ KP
Sbjct: 706 GAVGFLVKP 714
>gi|42566323|ref|NP_567301.2| DNA helicase domain-containing protein [Arabidopsis thaliana]
gi|332657133|gb|AEE82533.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
Length = 689
Score = 478 bits (1229), Expect = e-131, Method: Compositional matrix adjust.
Identities = 285/678 (42%), Positives = 399/678 (58%), Gaps = 57/678 (8%)
Query: 190 KKSFFFIYLTNILPNKRIWNSLHMC-GNWKVITQVLGTDSVVDERCELCSVQRKGQWDEK 248
+ FF IYLT N RIW +LH GN +I VL ++ E+ SV + +
Sbjct: 48 RSGFFLIYLTT---NTRIWKALHNGDGNLSLIKSVLQANTADTEQ----SVSSRNWGNHV 100
Query: 249 FGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCR 308
S+ LN SQ A+LACL + ++ V+LIWGPPGTG TKTV+ LL LL + C+
Sbjct: 101 LDIIRSANLNSSQESAILACLETREIRDKTSVKLIWGPPGTGNTKTVATLLFALLSLSCK 160
Query: 309 TLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKV----NPG 364
T+ CTPTN A+ +ASR+L L KES S + LG+I+L GN+ R+ + N
Sbjct: 161 TVVCTPTNTAVVAVASRLLALFKES----SSTEHSTYGLGNIVLVGNRVRMGIDERGNDD 216
Query: 365 FEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYV---EKLKEREDCNVN 421
++L+ RI KL E F+P + W ++ID+LE+ S Y Y+ E+ + +E N+
Sbjct: 217 LLNVFLDDRISKLGELFSPSNEWERSLEAVIDILENAESSYKKYLLLSERKENQETKNIL 276
Query: 422 QSEEKECRKETEGSKGERK-------PFLKYVRERFKCAVVSLRNC---IFIFCTHLPKS 471
+ + K GSK + F ++V E+F +++ + THLPKS
Sbjct: 277 TAFGEFVMKMFLGSKETPEKEEEIILTFGEFVMEKFDGLSETMKKIQKDMVDLYTHLPKS 336
Query: 472 YISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLH 531
++S N + M+ + L L EK S + D + V
Sbjct: 337 FLSSNDVKNMIVARQALRQARTFL---------QEKQGSFTFDCFNKFVCV--------- 378
Query: 532 QRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPL 591
+CL LR L + +P K + FC + A + F TAS + ++ + +
Sbjct: 379 ----DCLRTLRLLSKRFE---IPALLMKEDIRTFCLQNAHIIFCTASGAAEMTAERAGSI 431
Query: 592 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT 651
+ LV+DEAAQLKE ES LQL G++HAVLIGDE QLPAMV+S++ ++A F RSLFERL
Sbjct: 432 DMLVVDEAAQLKECESVAALQLQGLHHAVLIGDELQLPAMVQSEVCEKAKFVRSLFERLD 491
Query: 652 SLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
SL H KHLLN+QYRMHPSISLFPN++FY +I D VK +Y+K++L G FG++SFIN
Sbjct: 492 SLGHKKHLLNVQYRMHPSISLFPNMEFYGGKISDAEIVKESTYQKRFLQGNMFGSFSFIN 551
Query: 712 IIGGREDF-IYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G+E+F HS +N+VE++ V +IL L K +K K+S+GV+SPY AQV AI+++I
Sbjct: 552 VGLGKEEFGDGHSPKNMVEIAVVSEILTNLLKVSSETKTKMSVGVISPYKAQVSAIQERI 611
Query: 771 GFEYE--NKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
G +Y + + FT+ V+S+DGFQGGEEDIIIISTVR N G+IGF+S QR NVALTRAR
Sbjct: 612 GDKYTSVSDNLFTLNVRSVDGFQGGEEDIIIISTVRSNCNGNIGFLSNRQRANVALTRAR 671
Query: 829 HCLWILGSERTLISSESI 846
HCLW++G+ERTL S SI
Sbjct: 672 HCLWVIGNERTLSLSGSI 689
>gi|297723397|ref|NP_001174062.1| Os04g0582800 [Oryza sativa Japonica Group]
gi|255675720|dbj|BAH92790.1| Os04g0582800 [Oryza sativa Japonica Group]
Length = 794
Score = 478 bits (1229), Expect = e-131, Method: Compositional matrix adjust.
Identities = 307/806 (38%), Positives = 442/806 (54%), Gaps = 109/806 (13%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
V W LED+ +++ FKD++++IP +F +K Y S+ PLLEE R ++ S LEA+ P
Sbjct: 24 VLGWKLEDVMNENLFKDKMKRIPSTFSDLKSYLESYTSPLLEEMRTEMSSSLEAISTMPS 83
Query: 91 AQVIAFEELKPYGTNQYGIEVDY-WRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRR 149
++ E+ K Y I D +N+ + + E Y GDI++L+D KPE +SD+ R
Sbjct: 84 TKISWIEQKK--NNKVYDIVFDADSQNSKACNRPESYVPSVGDIIILSDVKPEHISDITR 141
Query: 150 VGRTWTFVSVTTVPDDEDENKKENRYKVKARNNM-----QVHDKTKKSFFFIYLTNILPN 204
GR + V+ T DED++ +Y + + + + D+ + F YL NI+
Sbjct: 142 NGRPY-IVAFVTEGGDEDDDSPPVKYVIISSGKIDSEDGKCQDRKEIKLFAAYLLNIVTY 200
Query: 205 KRIWNSLHMCGNWKVITQVLGTDSVVDERCE---LCSVQRKGQWD------EKFGPSFSS 255
RIW C ++ T V S++ E + + +K + D E + +
Sbjct: 201 IRIWR----CLDYN--TAVRRNQSLIQEMVHYPLVADIVQKQKKDHSIDSMEIWSKLSTM 254
Query: 256 TLNESQVGAMLACLRRLDCGHRSGVE-LIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTP 314
LN SQ A+L C+ + + S LIWGPPGTGKTKT+S+LL + + TL C P
Sbjct: 255 DLNNSQNDAILNCISSMHSNNSSSSFSLIWGPPGTGKTKTISVLLWLMREMDHGTLTCAP 314
Query: 315 TNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRI 374
TN+A+ ++ASR LK++KES R C LGD+LL GNK R+ V+ +EIYL+ R+
Sbjct: 315 TNLAVKQVASRFLKVIKESSDR-------AC-LGDVLLCGNKQRMCVDGNLKEIYLHDRV 366
Query: 375 KKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEG 434
+ L CF P++GWRH SS+ DL E+ SQY Y+E KE
Sbjct: 367 RTLLGCFVPMTGWRHRLSSLSDLFENGYSQYQKYLEDQKE-------------------- 406
Query: 435 SKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNL 494
G+ F Y R+RF LR C H+PKS I E ++ +++L LL+ F N
Sbjct: 407 --GDSLTFYSYTRKRFNATYPELRRCFKEVLFHVPKSTILEVNYNNIISLLELLEDF-NK 463
Query: 495 LFQDNVVSKELEKLFSHSVDEGISWAFVRKRY---LLQLHQRRSECLSVLRNLWNSLDEL 551
F + + E++ +F ++ D+ S ++ + L + R CL +L L +SL
Sbjct: 464 KFMNKNIEDEVKGIFLYNDDQSDSSVSSLTKFSKTAISLGKIRIRCLELLNMLLSSL--- 520
Query: 552 NLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPL 611
LP T+SK + +FC + AS+ F T SSS K+ + + L LV+DEAAQLKE E IPL
Sbjct: 521 KLPITSSKRTIREFCMESASIVFCTVSSSSKISNKK---LQLLVVDEAAQLKECEGLIPL 577
Query: 612 QLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSIS 671
+L + HA+LIGDECQLPA V+SK+ ++A FGRSLFERL+SL H KHLLN+QYRMHPSIS
Sbjct: 578 RLPTLKHAILIGDECQLPATVKSKVCEDASFGRSLFERLSSLGHEKHLLNMQYRMHPSIS 637
Query: 672 LFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVS 731
+FPN+ FY ++LD NVK K + K+YL HS
Sbjct: 638 IFPNISFYDRKLLDAPNVKQKEHRKKYLPA--------------------HS-------- 669
Query: 732 AVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQ 791
+K KV++GV+ PYTAQV+AI++K+G D VK+ S DGFQ
Sbjct: 670 --------------KTKNKVTVGVICPYTAQVLAIQQKLG--KMKFDPVIVKINSGDGFQ 713
Query: 792 GGEEDIIIISTVRCNTGGSIGFISKP 817
GGEEDII +STVR N+ G++GF+ KP
Sbjct: 714 GGEEDIITLSTVRSNSDGAVGFLVKP 739
>gi|224099651|ref|XP_002311566.1| predicted protein [Populus trichocarpa]
gi|222851386|gb|EEE88933.1| predicted protein [Populus trichocarpa]
Length = 1950
Score = 471 bits (1212), Expect = e-129, Method: Compositional matrix adjust.
Identities = 235/467 (50%), Positives = 328/467 (70%), Gaps = 7/467 (1%)
Query: 82 LEAMRRAPYAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKP 141
++ + RAP+A+++AF E KP+GT Y + +DYWRN SGKE YKTLPGDI++L KP
Sbjct: 1 MDIISRAPFAEMVAFFEAKPHGTLLYDVNIDYWRNRSRGSGKEHYKTLPGDIVILTSAKP 60
Query: 142 EKVSDLRRVGRTWTFVSVTTVPDDEDENKKE-NRYKVKARNNMQVHDKTKKSFFFIYLTN 200
E VSDL+RVG TWTF VT + DE E+ + VKA+ ++++ D +KS I LTN
Sbjct: 61 ENVSDLQRVGWTWTFAVVTRITGDETEDAATYTSFTVKAQKDIEISDGLQKSLTVISLTN 120
Query: 201 ILPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNES 260
I +KRIWN+LHM GN +I ++L TDSVV+E C S++ + +DE + SS LNES
Sbjct: 121 ITTSKRIWNALHMFGNLNIIKEILCTDSVVEENCNQYSMRERAIYDENV-VNLSSKLNES 179
Query: 261 QVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAIT 320
Q A+LACL + H+S VELIWGPPGTGKTKTVSMLL +LL++KCRTL C PTNV+IT
Sbjct: 180 QSKAVLACLLKKQSNHKSAVELIWGPPGTGKTKTVSMLLFSLLKMKCRTLTCGPTNVSIT 239
Query: 321 ELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLREC 380
E+ASRV KLV ES++ DS +++ +GDILLFGNKDRLKV+ +E+YL+YR+K+L EC
Sbjct: 240 EVASRVFKLVTESHEADSGTDSLFHSVGDILLFGNKDRLKVDSETQEVYLDYRVKRLIEC 299
Query: 381 FAPLSGWRHCFSSMIDLLEDCVSQYHIYVEK--LKEREDCNVNQSEEKECRKETEGSKGE 438
FAPL+GWR+CF+S ID EDCVSQY I+VE +K +E + N+ + + C + KGE
Sbjct: 300 FAPLTGWRNCFNSTIDFFEDCVSQYAIFVENELIKMQEHDDENEEKRESCSYQAVALKGE 359
Query: 439 RKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQD 498
K FL+++R+RF+ + L+ C+ + CTH+P++ I +++ Q +V+L LL+SF + LF
Sbjct: 360 PKTFLEFMRDRFRSTALPLKRCLTLLCTHIPETCILKHNIQNIVSLFGLLNSFESWLFHA 419
Query: 499 NVVSKELEKLFSH-SVDEGISWAFVRKRYLLQLHQRRSECLSVLRNL 544
V+S EL ++FSH +DE F LL+L +RSECL++L+ +
Sbjct: 420 AVISDELHEVFSHPGLDEDSFQGF--NDILLRLRLKRSECLTMLKRV 464
Score = 357 bits (915), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 171/251 (68%), Positives = 210/251 (83%), Gaps = 4/251 (1%)
Query: 635 KISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSY 694
++ D+AGFGRSLFERL+SL HSKHLL++QYRMHPSIS FPN +FY +QILD NVK++SY
Sbjct: 463 RVCDKAGFGRSLFERLSSLGHSKHLLDMQYRMHPSISCFPNSKFYFSQILDAPNVKARSY 522
Query: 695 EKQYLTGTEFGTYSFINIIGGRE--DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS 752
EK YL G FG Y+FIN+ GGRE D + HS +N+VEV+ V+K+L+ LYKAW G QKV
Sbjct: 523 EKHYLPGPMFGPYTFINVFGGREELDDVGHSRKNMVEVAIVLKLLRSLYKAWSG--QKVR 580
Query: 753 IGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIG 812
+GV+SPYTAQV AI++K+G +YE DGF+VKV SIDGFQGGEEDI+IISTVR NTGG+IG
Sbjct: 581 VGVISPYTAQVGAIQEKLGKKYETIDGFSVKVSSIDGFQGGEEDIVIISTVRSNTGGAIG 640
Query: 813 FISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKA 872
F+S P+R+NVALTRARHCLWILG+ERTL +SESIW LV DAK R CFF+ADE+++LAKA
Sbjct: 641 FMSDPRRINVALTRARHCLWILGNERTLSNSESIWEKLVHDAKERSCFFHADEDKDLAKA 700
Query: 873 RLEVSKELVEI 883
LEV KE ++
Sbjct: 701 ILEVKKEFDQL 711
Score = 199 bits (506), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/190 (55%), Positives = 132/190 (69%)
Query: 904 FVKAFRSINLIHKVLNSLGRFDELLMLENGSGNFMEAANMAVLEGDIFLATDLLQKAWNF 963
+V+AF S++ L +LG DELL LE SGNF+EAA +A L+G++ L DLL K +F
Sbjct: 1723 YVRAFDSMSSARTFLINLGCLDELLSLEVESGNFLEAAGIAKLKGELVLEADLLGKGGHF 1782
Query: 964 REASKLVLNFVFSNSLWSPGSRGWPLKQFTQKEELLQKAKSLAKNDSNQFYEFVCAEANI 1023
+EAS L+L FVF+NSLWS GS+GWPLKQF QKEELL KAK LAK SNQFYEFV EA I
Sbjct: 1783 KEASLLILWFVFANSLWSTGSKGWPLKQFLQKEELLTKAKLLAKGVSNQFYEFVHTEAEI 1842
Query: 1024 LSNDHSNLVMMNQQFIDSKRHQNIRGEILSSRMILDFHLHSNASTYHWEDELVLNLTTYS 1083
L N NL ++Q S+RH +IRGEILS+R +LD HLH N S Y WE++LV +L S
Sbjct: 1843 LLNSQHNLFKIHQSLDSSQRHSSIRGEILSARKMLDMHLHLNTSKYLWENDLVSDLARLS 1902
Query: 1084 DDRICKSQVS 1093
+ +Q +
Sbjct: 1903 ERNFLNNQAN 1912
>gi|358343481|ref|XP_003635830.1| Lupus brain antigen-like protein, partial [Medicago truncatula]
gi|355501765|gb|AES82968.1| Lupus brain antigen-like protein, partial [Medicago truncatula]
Length = 1232
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 263/650 (40%), Positives = 383/650 (58%), Gaps = 26/650 (4%)
Query: 29 HTVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRA 88
+T+F+WSL DI ++ +K +V+ I SF S +YF SF++PLL ETR +L S +E +
Sbjct: 25 NTIFNWSLPDILNKDLYKTKVDSIGLSFDSAGKYFQSFLYPLLNETRTELCSCMEVLSTL 84
Query: 89 PYAQVIAFEELKP--YGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSD 146
PYA+V+ LK +G + Y + D W+N GKE YKT P D+ +L DFKPE V+D
Sbjct: 85 PYAKVVTLNRLKSPLFGRSLYEVTTDNWKNRSLGHGKELYKTSPSDLFILVDFKPETVND 144
Query: 147 LRRVGRTWTFVSVTTVPDDEDENKKE--NRYKVKARNNMQVHDKTKKSFFFIYLTNILPN 204
L+R G +F V ++E++N E + +K A ++ + +KS F I+LTNI P
Sbjct: 145 LQRDGSIRSFALSAQVLNEENDNDTELKSNFKFIASKDIDIDGMGQKSLFIIFLTNITPI 204
Query: 205 KRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGA 264
+R+W SLHM GN K+I ++L V+E C+ C + D + S NESQ
Sbjct: 205 RRMWISLHMDGNSKLIQKILCASDAVEENCDHCPPKTDAFKDHEAYNKLLSEFNESQKKE 264
Query: 265 MLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELAS 324
+ ACL + C H+S V+LI PGT KTK + LL L ++ RTL C P+ VAI E+AS
Sbjct: 265 IGACLSSIGCNHKSTVDLICSSPGTEKTKILVTLLCALFKMNRRTLVCAPSTVAIKEVAS 324
Query: 325 RVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFAPL 384
L +V++ ++ C LGD+LLFGN ++L V +EIYL+YR+K+L CF P
Sbjct: 325 GGLSMVRQLFQ--------FCYLGDMLLFGNHEQLNVGEEIQEIYLDYRVKQLMSCFNPS 376
Query: 385 SGWRHCFSSMIDLLEDCVSQYHIYV--EKLKEREDCNVNQSEEKECRKETEGSKGERKPF 442
+GW++CF+SMI LE+C + Y + + +K KE+ N N S + ++ + F
Sbjct: 377 NGWKYCFTSMIHFLENCFTHYQMSILNQKTKEQVQTNDNNSNTAKDDSLSDSDVRTHQSF 436
Query: 443 LKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVS 502
+++ E+F+ + L+ I I TH+ +S+I E++ + L LDSF L+ N+VS
Sbjct: 437 VEFFIEKFQAIALPLKKYIHILRTHIARSFIMEHNLDVLADLNVSLDSFEALVSDGNIVS 496
Query: 503 KELEKLF----SHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTS 558
+ LE+LF + +R L + ++C+S+L++L SL + LP +
Sbjct: 497 ERLEELFYPLETRDSSSESDVVSADERSFL---ENITKCISLLKSLQVSLGKQKLPDIVT 553
Query: 559 KLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINH 618
+ + +FC + ASL STAS S+ LHS++IKPL+ +VIDEAAQLKE ES IPL L INH
Sbjct: 554 EKSIREFCLQTASLMLSTASDSFMLHSLDIKPLDIVVIDEAAQLKECESIIPLLLPEINH 613
Query: 619 AVLIGDECQLPAMVESKISDEAGFGRSLFERLT-SLNHSKHLLNIQYRMH 667
AVLIGDE Q P++V S EA FGRSLF RL H HLLN Q+RMH
Sbjct: 614 AVLIGDEHQQPSIV----SLEADFGRSLFHRLRLQGRHPNHLLNEQHRMH 659
>gi|358348332|ref|XP_003638201.1| Lupus brain antigen-like protein [Medicago truncatula]
gi|355504136|gb|AES85339.1| Lupus brain antigen-like protein [Medicago truncatula]
Length = 1498
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 263/650 (40%), Positives = 383/650 (58%), Gaps = 26/650 (4%)
Query: 29 HTVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRA 88
+T+F+WSL DI ++ +K +V+ I SF S +YF SF++PLL ETR +L S +E +
Sbjct: 25 NTIFNWSLPDILNKDLYKTKVDSIGLSFDSAGKYFQSFLYPLLNETRTELCSCMEVLSTL 84
Query: 89 PYAQVIAFEELKP--YGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSD 146
PYA+V+ LK +G + Y + D W+N GKE YKT P D+ +L DFKPE V+D
Sbjct: 85 PYAKVVTLNRLKSPLFGRSLYEVTTDNWKNRSLGHGKELYKTSPSDLFILVDFKPETVND 144
Query: 147 LRRVGRTWTFVSVTTVPDDEDENKKE--NRYKVKARNNMQVHDKTKKSFFFIYLTNILPN 204
L+R G +F V ++E++N E + +K A ++ + +KS F I+LTNI P
Sbjct: 145 LQRDGSIRSFALSAQVLNEENDNDTELKSNFKFIASKDIDIDGMGQKSLFIIFLTNITPI 204
Query: 205 KRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGA 264
+R+W SLHM GN K+I ++L V+E C+ C + D + S NESQ
Sbjct: 205 RRMWISLHMDGNSKLIQKILCASDAVEENCDHCPPKTDAFKDHEAYNKLLSEFNESQKKE 264
Query: 265 MLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELAS 324
+ ACL + C H+S V+LI PGT KTK + LL L ++ RTL C P+ VAI E+AS
Sbjct: 265 IGACLSSIGCNHKSTVDLICSSPGTEKTKILVTLLCALFKMNRRTLVCAPSTVAIKEVAS 324
Query: 325 RVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFAPL 384
L +V++ ++ C LGD+LLFGN ++L V +EIYL+YR+K+L CF P
Sbjct: 325 GGLSMVRQLFQ--------FCYLGDMLLFGNHEQLNVGEEIQEIYLDYRVKQLMSCFNPS 376
Query: 385 SGWRHCFSSMIDLLEDCVSQYHIYV--EKLKEREDCNVNQSEEKECRKETEGSKGERKPF 442
+GW++CF+SMI LE+C + Y + + +K KE+ N N S + ++ + F
Sbjct: 377 NGWKYCFTSMIHFLENCFTHYQMSILNQKTKEQVQTNDNNSNTAKDDSLSDSDVRTHQSF 436
Query: 443 LKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVS 502
+++ E+F+ + L+ I I TH+ +S+I E++ + L LDSF L+ N+VS
Sbjct: 437 VEFFIEKFQAIALPLKKYIHILRTHIARSFIMEHNLDVLADLNVSLDSFEALVSDGNIVS 496
Query: 503 KELEKLF----SHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTS 558
+ LE+LF + +R L + ++C+S+L++L SL + LP +
Sbjct: 497 ERLEELFYPLETRDSSSESDVVSADERSFL---ENITKCISLLKSLQVSLGKQKLPDIVT 553
Query: 559 KLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINH 618
+ + +FC + ASL STAS S+ LHS++IKPL+ +VIDEAAQLKE ES IPL L INH
Sbjct: 554 EKSIREFCLQTASLMLSTASDSFMLHSLDIKPLDIVVIDEAAQLKECESIIPLLLPEINH 613
Query: 619 AVLIGDECQLPAMVESKISDEAGFGRSLFERLT-SLNHSKHLLNIQYRMH 667
AVLIGDE Q P++V S EA FGRSLF RL H HLLN Q+RMH
Sbjct: 614 AVLIGDEHQQPSIV----SLEADFGRSLFHRLRLQGRHPNHLLNEQHRMH 659
>gi|358343475|ref|XP_003635827.1| Lupus brain antigen-like protein [Medicago truncatula]
gi|358348338|ref|XP_003638204.1| Lupus brain antigen-like protein [Medicago truncatula]
gi|355501762|gb|AES82965.1| Lupus brain antigen-like protein [Medicago truncatula]
gi|355504139|gb|AES85342.1| Lupus brain antigen-like protein [Medicago truncatula]
Length = 1654
Score = 468 bits (1205), Expect = e-128, Method: Compositional matrix adjust.
Identities = 263/650 (40%), Positives = 383/650 (58%), Gaps = 26/650 (4%)
Query: 29 HTVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRA 88
+T+F+WSL DI ++ +K +V+ I SF S +YF SF++PLL ETR +L S +E +
Sbjct: 25 NTIFNWSLPDILNKDLYKTKVDSIGLSFDSAGKYFQSFLYPLLNETRTELCSCMEVLSTL 84
Query: 89 PYAQVIAFEELKP--YGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSD 146
PYA+V+ LK +G + Y + D W+N GKE YKT P D+ +L DFKPE V+D
Sbjct: 85 PYAKVVTLNRLKSPLFGRSLYEVTTDNWKNRSLGHGKELYKTSPSDLFILVDFKPETVND 144
Query: 147 LRRVGRTWTFVSVTTVPDDEDENKKE--NRYKVKARNNMQVHDKTKKSFFFIYLTNILPN 204
L+R G +F V ++E++N E + +K A ++ + +KS F I+LTNI P
Sbjct: 145 LQRDGSIRSFALSAQVLNEENDNDTELKSNFKFIASKDIDIDGMGQKSLFIIFLTNITPI 204
Query: 205 KRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGA 264
+R+W SLHM GN K+I ++L V+E C+ C + D + S NESQ
Sbjct: 205 RRMWISLHMDGNSKLIQKILCASDAVEENCDHCPPKTDAFKDHEAYNKLLSEFNESQKKE 264
Query: 265 MLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELAS 324
+ ACL + C H+S V+LI PGT KTK + LL L ++ RTL C P+ VAI E+AS
Sbjct: 265 IGACLSSIGCNHKSTVDLICSSPGTEKTKILVTLLCALFKMNRRTLVCAPSTVAIKEVAS 324
Query: 325 RVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFAPL 384
L +V++ ++ C LGD+LLFGN ++L V +EIYL+YR+K+L CF P
Sbjct: 325 GGLSMVRQLFQ--------FCYLGDMLLFGNHEQLNVGEEIQEIYLDYRVKQLMSCFNPS 376
Query: 385 SGWRHCFSSMIDLLEDCVSQYHIYV--EKLKEREDCNVNQSEEKECRKETEGSKGERKPF 442
+GW++CF+SMI LE+C + Y + + +K KE+ N N S + ++ + F
Sbjct: 377 NGWKYCFTSMIHFLENCFTHYQMSILNQKTKEQVQTNDNNSNTAKDDSLSDSDVRTHQSF 436
Query: 443 LKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVS 502
+++ E+F+ + L+ I I TH+ +S+I E++ + L LDSF L+ N+VS
Sbjct: 437 VEFFIEKFQAIALPLKKYIHILRTHIARSFIMEHNLDVLADLNVSLDSFEALVSDGNIVS 496
Query: 503 KELEKLF----SHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTS 558
+ LE+LF + +R L + ++C+S+L++L SL + LP +
Sbjct: 497 ERLEELFYPLETRDSSSESDVVSADERSFL---ENITKCISLLKSLQVSLGKQKLPDIVT 553
Query: 559 KLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINH 618
+ + +FC + ASL STAS S+ LHS++IKPL+ +VIDEAAQLKE ES IPL L INH
Sbjct: 554 EKSIREFCLQTASLMLSTASDSFMLHSLDIKPLDIVVIDEAAQLKECESIIPLLLPEINH 613
Query: 619 AVLIGDECQLPAMVESKISDEAGFGRSLFERLT-SLNHSKHLLNIQYRMH 667
AVLIGDE Q P++V S EA FGRSLF RL H HLLN Q+RMH
Sbjct: 614 AVLIGDEHQQPSIV----SLEADFGRSLFHRLRLQGRHPNHLLNEQHRMH 659
>gi|297805246|ref|XP_002870507.1| hypothetical protein ARALYDRAFT_355656 [Arabidopsis lyrata subsp.
lyrata]
gi|297316343|gb|EFH46766.1| hypothetical protein ARALYDRAFT_355656 [Arabidopsis lyrata subsp.
lyrata]
Length = 828
Score = 465 bits (1197), Expect = e-127, Method: Compositional matrix adjust.
Identities = 312/878 (35%), Positives = 479/878 (54%), Gaps = 89/878 (10%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
VFSWS++DI ++ +K +++ +P+ F+SV +Y+ FV LL E +L S +++ ++P
Sbjct: 13 VFSWSIKDILNKDLYKQKLKTVPDKFRSVDEYYQCFVPHLLVEAHTELFSSFKSVSKSPV 72
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRN-TISNSGKEPYKTLPGDILVLADFKPEKVSDLRR 149
Q+ + E ++ Y N ++ S Y+ GD++ L KP ++ DL
Sbjct: 73 VQIRSMETKMKQSRGTSSNKLVYDINLKVAESFSAKYQPKCGDLIALTMEKPRRIDDLNP 132
Query: 150 VGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWN 209
+ + F S D D + V ++ + + + F ++L + N RIWN
Sbjct: 133 LLLGYVFSS------DGDL-----KISVHLSRSISLVENYR---FGVFLMTLTTNTRIWN 178
Query: 210 SLHMCGNWKVITQ------VLGTDSVV---DERCELCSVQRKGQWDEKFGPSFSSTLNES 260
+LH + + + LG ++V E+C CS + D S+ LN S
Sbjct: 179 ALHNEADISTLIKSVLQANTLGLNNVFVLGTEQC-FCSGNDVERSDLVLDIIRSTKLNSS 237
Query: 261 QVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAIT 320
Q A+L CL C H++ V+LIWGPPGTGKTKTV+ LLL+LL+++C+T+ C PTN AI
Sbjct: 238 QEAAILGCLETRKCNHKNSVKLIWGPPGTGKTKTVATLLLSLLKLRCKTVVCAPTNTAIV 297
Query: 321 ELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPG---FEEIYLNYRIKKL 377
++ASR+L + KE + S LG+I+L GN+DR+ +N +++L+ RI KL
Sbjct: 298 QVASRLLSVFKE----NCSSEHATYRLGNIVLSGNRDRMGINKNDHVLLDVFLDERIGKL 353
Query: 378 RECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKG 437
+ F+P SGW S+I LE+ +Y ER + + E E E +
Sbjct: 354 GKLFSPFSGWMQRLESLIQFLENPEGKY--------ERHVYELEEVERMEEEVERQEVVV 405
Query: 438 ERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQ 497
F ++V++ F + + THLPKSYIS ++M+A + L L Q
Sbjct: 406 NIPTFGEFVKKNFNSLSEEVDKRMVDLYTHLPKSYISSQDVKKMIASRQALQRVRYFL-Q 464
Query: 498 DNVVSKELEKLFSHSVD--EGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPC 555
+N S VD EG ++ F + L+ + +CL+ LR L + +P
Sbjct: 465 EN----------SSRVDFKEG-NFKFDCFKRLISV-----DCLAALRLLPKRFE---IPD 505
Query: 556 TTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAG 615
+ FC + A + TAS + +++ + LV+DEAAQLKE ES LQL G
Sbjct: 506 MLENEDIRKFCLQNAHIILCTASGAAEMNPERTGNIELLVVDEAAQLKECESVAALQLKG 565
Query: 616 INHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPN 675
++HA+LIGDE QLPAMV +++ ++A FGRSLFERL L H+KHLL++QYRMHPSIS FPN
Sbjct: 566 LHHAILIGDEFQLPAMVHNEMCEKAKFGRSLFERLVLLGHNKHLLDVQYRMHPSISRFPN 625
Query: 676 LQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDF-IYHSCRNIVEVSAVI 734
+FY +I D ANV+ Y+K++L G FG++SFIN+ G+E+F HS +N+VEV+ +
Sbjct: 626 KEFYGGRIKDAANVQESIYQKRFLQGNMFGSFSFINVGRGKEEFGDGHSPKNMVEVAVIS 685
Query: 735 KILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGE 794
+I+ L+K + K+S+GVVSPY QV AI+++IG +Y + G
Sbjct: 686 EIISNLFKVSSERRMKMSVGVVSPYKGQVRAIQERIGDKYSSLSG--------------- 730
Query: 795 EDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDA 854
+ T C S+GF+S QR NVALTRARHCLW++G+E TL S S W ++ ++
Sbjct: 731 ----QLFTFEC----SVGFLSNRQRANVALTRARHCLWVIGNETTLALSGSFWAKMISES 782
Query: 855 KARQCFFNADEERNLAKARLEVSKELVEIGAESLTSTS 892
+ R CF++A +E+NL A +S L+E + SL S S
Sbjct: 783 RTRGCFYDAADEKNLRDA---MSDALLEDVSSSLGSLS 817
>gi|326514986|dbj|BAJ99854.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 710
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 272/677 (40%), Positives = 392/677 (57%), Gaps = 64/677 (9%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTN 316
LNESQ+ A+ + + S ++LIWGPPGTGKTKT+S +L +L RTL C PTN
Sbjct: 29 LNESQLNAVEDSVAAMGSPSPS-LKLIWGPPGTGKTKTISAILWAMLLRGHRTLTCAPTN 87
Query: 317 VAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFE--EIYLNYRI 374
A+ E+ASRV++LV+E S + C L DI+L GN +++KV E ++L+YR+
Sbjct: 88 TAVLEVASRVVQLVQEF----SNGGSGGCFLSDIVLLGNNEKMKVEASHELSAVFLDYRV 143
Query: 375 KKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKL-KERED---------------- 417
++L +CF+P GW HC S+ID L + VS+Y +Y +K+ K+RE+
Sbjct: 144 ERLSQCFSPNGGWGHCLRSLIDFLAEPVSKYQLYTDKITKDREEDEEKKKNISSNVLIDK 203
Query: 418 -------CNVNQSEEKE-CRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLP 469
CN EK+ C E + PF +VR K +L +CI P
Sbjct: 204 KNKNVARCNKGNGHEKDRCNNEGDVLMFVTLPFKDFVRATHKELAHNLCHCIETLQNDFP 263
Query: 470 KSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQ 529
+ + SF M ++ G LL + + + + + +++ + S V +
Sbjct: 264 RDPTTALSFSHMSSVVEATRVLGELL---DAGAGDRHEAWVNNLGDACSLCSVNSDPPCK 320
Query: 530 ---LHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSV 586
+ RS CL L L N+L LP K +E + +RA T S+S++L++V
Sbjct: 321 KCRFRKARSLCLGQLEYLRNNL---KLPGCYDKRPIEIYLLQRAKSIMCTVSTSFRLYNV 377
Query: 587 --------------------EI-KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDE 625
EI PL LV+DEAAQLKE E+ IPLQL I HAV IGDE
Sbjct: 378 LPTDNHKPVGGQGQRQLKEPEIFPPLELLVVDEAAQLKECEAMIPLQLPCIRHAVFIGDE 437
Query: 626 CQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILD 685
QLPA+++SKIS+ A FGRS+FERL SL KHLL+ QYRMHP IS FP +FY +I D
Sbjct: 438 RQLPALIKSKISENADFGRSIFERLISLGCPKHLLDTQYRMHPEISRFPVWRFYGGEIGD 497
Query: 686 GANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKA 743
G NV KS+ ++ L G FG YSFIN+ GGRE H S +N +E++ V I+++L++
Sbjct: 498 GPNVVFKSHRRRLLRGNMFGPYSFINVRGGRESSEEHSRSPKNTIEIAVVSLIVERLFRE 557
Query: 744 WVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTV 803
S ++S+G++SPY AQV A ++K+ Y ++DGF++K+KS+DGFQGGEED+IIISTV
Sbjct: 558 SASSGTRLSVGILSPYNAQVRAFQEKLEKPYGSRDGFSLKIKSVDGFQGGEEDVIIISTV 617
Query: 804 RCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
R N G++GF+ +R NVALTRA+HCLW++G+ TL + S+W +V D++ RQ FF+A
Sbjct: 618 RSNEDGAVGFLRDAKRTNVALTRAKHCLWVIGNATTLSKNRSVWQDIVYDSQRRQRFFHA 677
Query: 864 DEERNLAKARLEVSKEL 880
D ++ L+ A + EL
Sbjct: 678 DRDKGLSDAIQAATIEL 694
>gi|357491699|ref|XP_003616137.1| Ubiquitin [Medicago truncatula]
gi|355517472|gb|AES99095.1| Ubiquitin [Medicago truncatula]
Length = 1337
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 337/1007 (33%), Positives = 494/1007 (49%), Gaps = 199/1007 (19%)
Query: 9 EMMEGKGCSSSSKKAVGFAGHTVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVF 68
+MME S+ G V SW+LED+ +++ +KD+V KIPE+F+S Y SF+
Sbjct: 352 QMME------KSRNGSGSLIDIVLSWTLEDVLNENLYKDKVHKIPETFKSATDYNNSFIP 405
Query: 69 PLLEETRMQLRSGLEAMRRAPYAQVIAFEELKPY----GTNQY-----GIEVDYWRNTIS 119
L EETR L S L + +A ++ E K NQ+ I ++ +
Sbjct: 406 LLFEETRADLSSSLSGVSQASLCEIWKVENSKQLKFHKAQNQFIQFHHTIRLESTTESDR 465
Query: 120 NSGKEPYKTLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKA 179
+ Y+ GD++ + KP+ ++DL + + V +N+ R V +
Sbjct: 466 DENGGSYEPASGDLIAITYIKPKSLNDLNTLNSPYHIAYVNGA-----KNRFSGRITVLS 520
Query: 180 RNNMQV-------HDKTKKSFFFIYLTNILPNKRIWNSL---HMCGNWKVITQVLGTDSV 229
M++ + T+K + +Y+ N+ N RIW +L + +I +VL +
Sbjct: 521 SKCMKMDVESVSMKNNTQK-MYAVYIMNMTTNVRIWKALDSKSKGDHLNIIEKVLQPGLI 579
Query: 230 VD-------------ERCELCSVQRKGQWDEKFGPSF-------SSTLNESQVGAMLACL 269
++ E C++C + + SF S LNESQ A+ +C
Sbjct: 580 LNMNVTCIMLVFQSGENCKICMSRSNSK------ASFITKDIIRSQNLNESQQDAVTSCA 633
Query: 270 RRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKL 329
+DC H + +LIWGPPGTGKTKTV+ LL +LL++K RTL C PTN AI ++A R+ L
Sbjct: 634 SMVDCSH-ANTKLIWGPPGTGKTKTVACLLFSLLKLKSRTLTCAPTNTAILQVAIRLHSL 692
Query: 330 VKESYKRDS-------------RSNTPICP-LGDILL----------------------- 352
V +S D+ R CP L DI L
Sbjct: 693 VTDSPDHDTYGLGDIVLFGNGKRMKVDSCPGLEDIFLDYRVKNLMQCYTEWNHSFEAMIK 752
Query: 353 -----------------FGNKD----------RLKVNPGFE-------------EIYLNY 372
FGN D R ++ ++ E ++
Sbjct: 753 FLSDPSKQYFLEKSKKDFGNHDLRFEDYVQKARTEITKLYQLVENDKKECMLTIERFVKQ 812
Query: 373 RIKKLRECFAPLSGWRHCFSSMIDLLED----------------------CVSQYHIYVE 410
RI KLR ++ + ++S++ LLED VS Y Y +
Sbjct: 813 RIDKLR--MNKVNFFMTLYTSLMQLLEDSRDQIFSKMGYKSLDDFATNSIVVSAYSAYKQ 870
Query: 411 KL--KEREDCNVNQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHL 468
+ + +D + K RKE ++V++RF L+ I CTH+
Sbjct: 871 NIGYDKYDDSLTFEGYVKRARKEIMELYQSIMTMEQFVKQRFGELSEKLKFLIHTLCTHM 930
Query: 469 PKSYIS-ENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYL 527
PKS IS N Q + LKS+ S F+ V E +E I F
Sbjct: 931 PKSLISVNNMLQALDLLKSMEISLSQAKFKQTVDDFE---------EESIPACFGPSSL- 980
Query: 528 LQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVE 587
R++CL +L L NS+ +LP + +E FC ASL T SSS KL+S E
Sbjct: 981 -----ERNDCLRILSFLSNSI---SLPEFKVRHQVEKFCLSDASLILCTVSSSIKLYSEE 1032
Query: 588 IKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLF 647
P+ FLVIDEAAQLKE ES IPLQL G+ H +LIGDE QLPA+V+SKI+D FGRS+F
Sbjct: 1033 TSPVKFLVIDEAAQLKECESMIPLQLPGLQHCILIGDEKQLPALVKSKIADNCRFGRSMF 1092
Query: 648 ERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTY 707
ERL L + KH+LN+QYRMHPSISLFP +FY + LD VK +SY K +L G + +Y
Sbjct: 1093 ERLVMLGYKKHMLNVQYRMHPSISLFPCKEFYDEKNLDALAVKDQSYNKSFLEGEMYSSY 1152
Query: 708 SFINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
SFINI G+E F + HS +N+VEV+ + +I++ L K ++ +K+KVSIG++SPY AQV I
Sbjct: 1153 SFINISKGKEKFGHGHSLKNMVEVAVISEIIKNLRKEFMRTKKKVSIGIISPYNAQVYEI 1212
Query: 767 RKKIGFE-YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALT 825
++K+ + +++ F+V V+S+D + G++GF+S QR NVA+T
Sbjct: 1213 QEKVKQDTWDSNSDFSVNVRSVD-----------------DGSGNVGFLSNRQRANVAMT 1255
Query: 826 RARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKA 872
RAR+CLWILG+ TL +S+SIW L+ DAK R C+ NADE++ LA+
Sbjct: 1256 RARYCLWILGNASTLANSDSIWRKLIIDAKRRDCYHNADEDKKLARV 1302
>gi|5732068|gb|AAD48967.1|AF147263_9 contains similarity to nonsense-mediated mRNA decay trans-acting
factors [Arabidopsis thaliana]
gi|7267314|emb|CAB81096.1| AT4g05540 [Arabidopsis thaliana]
Length = 660
Score = 457 bits (1176), Expect = e-125, Method: Compositional matrix adjust.
Identities = 265/613 (43%), Positives = 371/613 (60%), Gaps = 49/613 (7%)
Query: 254 SSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACT 313
S+ LN SQ A+LACL + ++ V+LIWGPPGTG TKTV+ LL LL + C+T+ CT
Sbjct: 77 SANLNSSQESAILACLETREIRDKTSVKLIWGPPGTGNTKTVATLLFALLSLSCKTVVCT 136
Query: 314 PTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKV----NPGFEEIY 369
PTN A+ +ASR+L L KES S + LG+I+L GN+ R+ + N ++
Sbjct: 137 PTNTAVVAVASRLLALFKES----SSTEHSTYGLGNIVLVGNRVRMGIDERGNDDLLNVF 192
Query: 370 LNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYV---EKLKEREDCNVNQSEEK 426
L+ RI KL E F+P + W ++ID+LE+ S Y Y+ E+ + +E N+ + +
Sbjct: 193 LDDRISKLGELFSPSNEWERSLEAVIDILENAESSYKKYLLLSERKENQETKNILTAFGE 252
Query: 427 ECRKETEGSKGERK-------PFLKYVRERFKCAVVSLRNC---IFIFCTHLPKSYISEN 476
K GSK + F ++V E+F +++ + THLPKS++S N
Sbjct: 253 FVMKMFLGSKETPEKEEEIILTFGEFVMEKFDGLSETMKKIQKDMVDLYTHLPKSFLSSN 312
Query: 477 SFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSE 536
+ M+ + L L EK S + D + V +
Sbjct: 313 DVKNMIVARQALRQARTFL---------QEKQGSFTFDCFNKFVCV-------------D 350
Query: 537 CLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVI 596
CL LR L + +P K + FC + A + F TAS + ++ + ++ LV+
Sbjct: 351 CLRTLRLLSKRFE---IPALLMKEDIRTFCLQNAHIIFCTASGAAEMTAERAGSIDMLVV 407
Query: 597 DEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHS 656
DEAAQLKE ES LQL G++HAVLIGDE QLPAMV+S++ ++A F RSLFERL SL H
Sbjct: 408 DEAAQLKECESVAALQLQGLHHAVLIGDELQLPAMVQSEVCEKAKFVRSLFERLDSLGHK 467
Query: 657 KHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGR 716
KHLLN+QYRMHPSISLFPN++FY +I D VK +Y+K++L G FG++SFIN+ G+
Sbjct: 468 KHLLNVQYRMHPSISLFPNMEFYGGKISDAEIVKESTYQKRFLQGNMFGSFSFINVGLGK 527
Query: 717 EDF-IYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYE 775
E+F HS +N+VE++ V +IL L K +K K+S+GV+SPY AQV AI+++IG +Y
Sbjct: 528 EEFGDGHSPKNMVEIAVVSEILTNLLKVSSETKTKMSVGVISPYKAQVSAIQERIGDKYT 587
Query: 776 --NKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWI 833
+ + FT+ V+S+DGFQGGEEDIIIISTVR N G+IGF+S QR NVALTRARHCLW+
Sbjct: 588 SVSDNLFTLNVRSVDGFQGGEEDIIIISTVRSNCNGNIGFLSNRQRANVALTRARHCLWV 647
Query: 834 LGSERTLISSESI 846
+G+ERTL S SI
Sbjct: 648 IGNERTLSLSGSI 660
>gi|255570463|ref|XP_002526190.1| ATP binding protein, putative [Ricinus communis]
gi|223534494|gb|EEF36194.1| ATP binding protein, putative [Ricinus communis]
Length = 782
Score = 451 bits (1160), Expect = e-123, Method: Compositional matrix adjust.
Identities = 259/581 (44%), Positives = 341/581 (58%), Gaps = 75/581 (12%)
Query: 367 EIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVE---------------- 410
+I+L+ R L CFAP SGW+H +SMI LLE+ QY +Y++
Sbjct: 11 DIFLDNRADTLSSCFAPKSGWKHSLASMICLLENPQEQYRMYLQEDRTEKDKEDKKVEKE 70
Query: 411 ----------------------------------KLKEREDCNVNQSEEKECRKETEGSK 436
K +++ ++ + ++K KE EG
Sbjct: 71 QQMINQKKGEENYNGNRKGKKKKNGKKVIVKEMKKEEQKASLHIQKDKQKLKGKEHEGGD 130
Query: 437 G---------------ERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEM 481
G E ++V +RFK L+ CI THLP S IS + M
Sbjct: 131 GYFKNKKTEQEVVAKCEVMTLEEFVEKRFKTIGERLKFCIVNLYTHLPTSSISLELVRNM 190
Query: 482 VALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVL 541
+ LL S LL N+ + +++ +DE A ++L R ECLS+L
Sbjct: 191 IGALGLLASLETLLNSVNIAKQGFKQVLG--IDEN---AGSITSSHMKLSMTRKECLSIL 245
Query: 542 RNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQ 601
++L + +P TS +++FC A L F T SSS KLH+ + PL FLVIDEAAQ
Sbjct: 246 KSLPPTFP---VPDFTSTFAIKEFCLANACLLFCTTSSSIKLHTKRMTPLRFLVIDEAAQ 302
Query: 602 LKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLN 661
LKE ESTIPLQL+G++HA+L+GDE QL AMV SKIS+EAGFGRSLFERL L + KHLLN
Sbjct: 303 LKECESTIPLQLSGLHHAILVGDERQLSAMVNSKISEEAGFGRSLFERLVKLGYKKHLLN 362
Query: 662 IQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFI- 720
IQYRMHPSISL PN +FY QILD NVK S+E+++L G + +YSFINI G+E+F
Sbjct: 363 IQYRMHPSISLLPNREFYGKQILDALNVKEISHERRFLEGNMYSSYSFINISHGKEEFDE 422
Query: 721 YHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDG- 779
+ S RN+VEV+ V I+ L+ ++ +K+KVSIG++SPY AQV AI++KIG D
Sbjct: 423 FRSLRNMVEVAVVSDIVANLFSEFISTKKKVSIGIISPYKAQVHAIQEKIGNYSSGSDAE 482
Query: 780 FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERT 839
F+V V+SIDGFQGGEED+II STVRCN GS+GF+S QR NVALTRAR+CLWILG+ T
Sbjct: 483 FSVNVRSIDGFQGGEEDVIIFSTVRCNNKGSVGFLSNCQRANVALTRARYCLWILGNAAT 542
Query: 840 LISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKEL 880
L S SIW LV DA+ R+CF NADE+ LA+A + EL
Sbjct: 543 LNKSGSIWKKLVADAERRRCFHNADEDNRLAQAIIAALIEL 583
>gi|21717153|gb|AAM76346.1|AC074196_4 putative helicase [Oryza sativa Japonica Group]
gi|31433282|gb|AAP54820.1| tRNA-splicing endonuclease positive effector, putative, expressed
[Oryza sativa Japonica Group]
Length = 1361
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 247/589 (41%), Positives = 357/589 (60%), Gaps = 49/589 (8%)
Query: 308 RTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEE 367
R LAC PTN+A+ ++ASR+++L+++ S++ GDI+LFGNKDRL + +
Sbjct: 343 RILACAPTNMAVLQVASRLIELIQDF------SSSHCYSFGDIVLFGNKDRLHIGKELSK 396
Query: 368 IYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKERED-CNVNQSEEK 426
+YL+ R+ KL F GW+ S++ L +C+S+Y + ++ + D CN+
Sbjct: 397 VYLDDRVHKLLRYFKREDGWKARVDSVMKFLMNCISRYQMSLDIQQASSDGCNLT----- 451
Query: 427 ECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKS 486
F KY +F V L CI F HLP + N M+ KS
Sbjct: 452 ---------------FKKYFTSKFSTLVKELARCIDTFFDHLPTDSLGRN-LDRMMFAKS 495
Query: 487 LLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKR---YLLQLHQR---------- 533
LLD LL D+V + L +F S DE I + + LH
Sbjct: 496 LLDKLQQLLCADDVSDELLFTIFKPS-DEPIDSFDSHDQTDDATVDLHDHDISLDDPLEI 554
Query: 534 RSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVE-IKPLN 592
+S C+ L +L ++ LPC ++ + D C KRA L F TASSS++L ++ + P++
Sbjct: 555 KSLCIKTLMDL----SKMRLPCEDNESSIRDLCLKRAKLVFCTASSSFELFRLQNVMPIS 610
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS 652
LVIDEAAQLKE E+ +PL L GI H +LIGDE QL ++V+SKI+ +A FGRSL+ERL +
Sbjct: 611 ILVIDEAAQLKECEALVPLLLPGIEHILLIGDENQLSSLVKSKIAKDADFGRSLYERLCT 670
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ + KHLL +QYRMHP I+ FPN FY N+I DG +V+ + Y K YL G +G YSFI+I
Sbjct: 671 MGYRKHLLEVQYRMHPGINKFPNANFYDNRISDGPSVQQEDYMKSYLPGPIYGAYSFIHI 730
Query: 713 IGGRE--DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
E D + S +N+VEV+ I+++L K +Q+ S+GV+SPYTAQV+A+++++
Sbjct: 731 ENDMEMLDELGQSSKNMVEVAVATNIVERLAKECSEKRQRTSLGVISPYTAQVIALQERL 790
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
G +++N + +V VKSIDGFQGGEEDII+ISTVR N G +GF+S R+NVALTRA++C
Sbjct: 791 GKQFKNHEFLSVTVKSIDGFQGGEEDIILISTVRSNKNGKVGFLSDAGRINVALTRAKYC 850
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKE 879
LWILG+ TL++S SIW LV D+K R CFFNA +++NLA+ + +KE
Sbjct: 851 LWILGNGATLLASNSIWAELVHDSKRRGCFFNALDDKNLAEIIMHATKE 899
Score = 96.7 bits (239), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 84/155 (54%), Gaps = 9/155 (5%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
V SWS++ I ++ +D+V KIPE+F S++QY SF PLLEE R + S +E + +APY
Sbjct: 74 VLSWSVDQILNKDLLRDKVAKIPETFSSMEQYMTSFFGPLLEEVRGDMCSSMEDISKAPY 133
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRV 150
A V++ ++ G Y I++D WR E YK D+L++++ +P SD+ +
Sbjct: 134 ASVLSVNAMR-KGKGSYEIKLDKWRGVSHGCAIEGYKPKAADLLLISETRPANQSDILKQ 192
Query: 151 GRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQV 185
++ V V V + N+ VKA M+
Sbjct: 193 SKSCVIVWVGKV--------QGNKMTVKASRRMET 219
>gi|359490548|ref|XP_002267012.2| PREDICTED: uncharacterized protein LOC100267290 [Vitis vinifera]
Length = 1115
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/448 (52%), Positives = 299/448 (66%), Gaps = 18/448 (4%)
Query: 442 FLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVV 501
F ++V++R L+ CI THLP S+IS + M+ LL+S LL V
Sbjct: 497 FQEFVKKRIDSTGEKLKFCIINLYTHLPTSFISIEVAKNMIKALGLLESIATLLHSSTVS 556
Query: 502 SKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLV 561
K L++ D G + K LH+ R ECL +L+ L +L P T L
Sbjct: 557 FKRLKENICEFEDVGKAVDQFSK-----LHRNRQECLQILKCLHQTL-----PVPTIFLY 606
Query: 562 --LEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHA 619
+++FC ASL F TASSS KLH +KP LVIDEAAQLKE ES IPLQLAG+ HA
Sbjct: 607 DEIKNFCLCNASLIFCTASSSAKLHMAGMKPFELLVIDEAAQLKECESAIPLQLAGLRHA 666
Query: 620 VLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFY 679
+L+GDE QLPAMV+SKIS A FGRSLFERL SL H KHLLN+QYRMHPSISLFPN +FY
Sbjct: 667 ILVGDELQLPAMVKSKISTSAEFGRSLFERLVSLGHRKHLLNLQYRMHPSISLFPNQEFY 726
Query: 680 RNQILDGANVKSKSYEKQYLTGTEFGTYSFINII-GGREDFIYHSCRNIVEVSAVIKILQ 738
N+I D NVK +SY++ +L G +G+YSFIN+ G E HS RN+VEV AV +I+
Sbjct: 727 NNKISDAPNVKERSYKRCFLQGDMYGSYSFINVAYGNEEQSNSHSTRNMVEVVAVSEIVA 786
Query: 739 KLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENK--DGFTVKVKSIDGFQGGEED 796
KL+K V +KQKVS+GV+SPY AQV AI++K+G Y F+V V+S+DGFQGGEED
Sbjct: 787 KLFKESVANKQKVSVGVISPYNAQVFAIQEKLGKTYSTSTHSDFSVSVRSVDGFQGGEED 846
Query: 797 IIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKA 856
+IIISTVR N G +GF+S QR NVALTRARHCLWILG+ TL +S +IW LV +AKA
Sbjct: 847 VIIISTVRSNLNGKVGFLSNRQRANVALTRARHCLWILGNGPTLANSGTIWTKLVSNAKA 906
Query: 857 RQCFFNADEERNLAKARLEVSKELVEIG 884
R CF+NA++++NLA+A ++ LVE G
Sbjct: 907 RGCFYNAEDDKNLAQA---IATSLVEHG 931
Score = 259 bits (662), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 146/382 (38%), Positives = 216/382 (56%), Gaps = 34/382 (8%)
Query: 49 VEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPYAQVIAFE---ELKPYGTN 105
++KIP++F S Y SF+ PL+EET L S + + RAP +V++ + + KP
Sbjct: 18 MKKIPDTFLSTSHYLTSFINPLIEETHADLSSSMTTLARAPICEVLSVKISKDFKPPRDL 77
Query: 106 QYGIEVDYWRNTISNSG-KEPYKTLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPD 164
Y I + R+T + +G EP K GD++ D +P+ +SDL R R + +++ P
Sbjct: 78 FYEISLKRLRDTANEAGIYEPEK---GDLIAFTDVRPKSISDLDRPKRPYV-IALVQGPL 133
Query: 165 DEDENKK-----------ENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWNSLHM 213
E NK E R + + + DK K++ F ++LTN+ N RIW +LH+
Sbjct: 134 GETSNKLPILSSKLIECFEQRMAMDHKRETEA-DKKKETLFAVFLTNMTTNIRIWTALHL 192
Query: 214 C---GNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLR 270
GN +I +VL +DS + C LC WD P LN+SQ A+ +C+
Sbjct: 193 GQERGNMSLIQKVLQSDSSAENTCTLCFSNPASVWDPITCPF---NLNDSQQAAVSSCIA 249
Query: 271 RLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLV 330
C H++ V+LIWGPPGTGKTKTV LL L R+KCRT+ C PTN+A+ E+ +R+++LV
Sbjct: 250 ARKCDHQNSVKLIWGPPGTGKTKTVGTLLFVLFRMKCRTVTCAPTNIAVIEVTTRLVRLV 309
Query: 331 KESYKRDSRSNTPICPLGDILLFGNKDRLKVNP--GFEEIYLNYRIKKLRECFAPLSGWR 388
+ES + S LGDI+LFGN +R+K++ +++LN+RI L CFAPLSGW+
Sbjct: 310 RESIECGSYG------LGDIVLFGNGERMKIDKHDDLLDVFLNFRINILARCFAPLSGWK 363
Query: 389 HCFSSMIDLLEDCVSQYHIYVE 410
H SMI LLED Y Y++
Sbjct: 364 HSIESMISLLEDPEEMYDKYLK 385
>gi|449531179|ref|XP_004172565.1| PREDICTED: helicase SEN1-like, partial [Cucumis sativus]
Length = 606
Score = 428 bits (1100), Expect = e-116, Method: Compositional matrix adjust.
Identities = 262/635 (41%), Positives = 372/635 (58%), Gaps = 84/635 (13%)
Query: 122 GKEPYKTLPGDILVLADFKPEKVSD--LRRVGR-TWTFVSVTTVPDDEDENKKENRYKVK 178
G++PYK+LPGD V+ D P+ ++ L + + W F + V D N K+
Sbjct: 42 GQQPYKSLPGDFFVILDVDPQTITSDYLEKSSKLNWAFAWLGQVND----NNTPTHLKLH 97
Query: 179 ARNNMQVHDKTKKS-FFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCELC 237
N+M D+ K + F ++L N+ N RIW +L + ++ VLGT S+ ++ C+ C
Sbjct: 98 ISNSM---DQLKSTPLFIVFLMNLTTNLRIWKTLQCSSSGGIVKHVLGTMSMDNKTCKQC 154
Query: 238 SVQRKGQWDEKFGPSF---SSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
+ Q G+ + + S +LNESQ A+ +C+R++ C H+ +ELIWGPPGTGKTKT
Sbjct: 155 NNQTDGEDSTEDMATLRLASLSLNESQRVAIESCIRKVKCQHKPSIELIWGPPGTGKTKT 214
Query: 295 VSMLLLTLLRI--KCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPI-CPLGDIL 351
S+LL +L I + RTLAC PTNVAIT LAS+VLKL+K DS S I CPLG++L
Sbjct: 215 TSILLWKILAINHQIRTLACAPTNVAITNLASQVLKLLK----HDSLSRNAIFCPLGELL 270
Query: 352 LFGNKDRLKVNPG--FEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYV 409
LFGNKDRLK + E+IYL+ R++KL +C G + SSMI + +
Sbjct: 271 LFGNKDRLKFDYSHQLEDIYLDRRVEKLFKCLGQY-GLKFQISSMIGIFQ---------- 319
Query: 410 EKLKEREDCNVNQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLP 469
E K L ++ FK V SL C+ IF TH+P
Sbjct: 320 ----------------------------ENK--LSKLKRMFKSNVSSLLECVHIFTTHIP 349
Query: 470 KSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQ 529
+ I E++++++ L + G LL ++N +++ D+ + A + L+
Sbjct: 350 QQVIMEHNWKKLEILVGFICDIGTLLSKNN---------YNYDDDDTMGEALID----LK 396
Query: 530 LHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIK 589
H L VLR L SLDE+ +P SK +E FCF++ASL FST S+S+KL+SV+
Sbjct: 397 CH-----FLLVLRTLLVSLDEIEVPSKLSKNSIEKFCFQKASLIFSTTSNSFKLNSVKKN 451
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
LN +V+DEAAQLKE ES IPLQL I+HA+L+GDE QLPA V+SK+ + A FGRSL+ER
Sbjct: 452 SLNLVVVDEAAQLKECESLIPLQLPHISHAILVGDEFQLPATVKSKVCERAKFGRSLYER 511
Query: 650 LTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSF 709
L+ + +SKHLL+ QYRMHP +S FPN +FY N+I+D + V +K YEK+YL FG YSF
Sbjct: 512 LSLIGYSKHLLDTQYRMHPLVSYFPNSKFYGNKIMDASIVMNKEYEKEYLPSPLFGPYSF 571
Query: 710 INIIGGREDF--IYHSCRNIVEVSAVIKILQKLYK 742
IN+ GG E+ S +N+VEV+ V +I+Q LYK
Sbjct: 572 INVCGGEEESNGDGQSKKNMVEVTVVTQIIQMLYK 606
>gi|222629428|gb|EEE61560.1| hypothetical protein OsJ_15908 [Oryza sativa Japonica Group]
Length = 738
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 244/539 (45%), Positives = 328/539 (60%), Gaps = 66/539 (12%)
Query: 347 LGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYH 406
LGD+LL GNK R+ V+ +EIYL+ R++ L CF P++GWRH SS+ DL E+ SQY
Sbjct: 200 LGDVLLCGNKQRMCVDGNLKEIYLHDRVRTLLGCFVPMTGWRHRLSSLSDLFENGYSQYQ 259
Query: 407 IYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCT 466
Y+E KE G+ F Y R+RF LR C
Sbjct: 260 KYLEDQKE----------------------GDSLTFYSYTRKRFNATYPELRRCFKEVLF 297
Query: 467 HLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRY 526
H+PKS I E ++ +++L LL+ F N F + + E++ +F ++ D+ S ++
Sbjct: 298 HVPKSTILEVNYNNIISLLELLEDF-NKKFMNKNIEDEVKGIFLYNDDQSDSSVSSLTKF 356
Query: 527 ---LLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKL 583
+ L + R CL +L L +SL LP T+SK + +FC + AS+ F T SSS K+
Sbjct: 357 SKTAISLGKIRIRCLELLNMLLSSL---KLPITSSKRTIREFCMESASIVFCTVSSSSKI 413
Query: 584 HSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFG 643
+ + L LV+DEAAQLKE E IPL+L + HA+LIGDECQLPA V+SK+ ++A FG
Sbjct: 414 SNKK---LQLLVVDEAAQLKECEGLIPLRLPTLKHAILIGDECQLPATVKSKVCEDASFG 470
Query: 644 RSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTE 703
RSLFERL+SL H KHLLN+QYRMHPSIS+FPN+ FY ++LD NVK K + K+YL G
Sbjct: 471 RSLFERLSSLGHEKHLLNMQYRMHPSISIFPNISFYDRKLLDAPNVKQKEHRKKYLPGLM 530
Query: 704 FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQV 763
FG YSF NI ED A +K KV++GV+ PYTAQV
Sbjct: 531 FGPYSFFNI----ED------------------------AHSKTKNKVTVGVICPYTAQV 562
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
+AI++K+G D VK+ S+DGFQGGEEDIII+STVR N+ G++GF+S QR NV+
Sbjct: 563 LAIQQKLG--KMKFDPVIVKINSVDGFQGGEEDIIILSTVRSNSDGAVGFLSNRQRTNVS 620
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERN----LAKARLEVSK 878
LTRAR+CLWILG+ TL S SIW LV DAK RQCFFNA+ +++ LAK ++E +K
Sbjct: 621 LTRARYCLWILGNATTLSRSGSIWADLVRDAKDRQCFFNANSDKDISRVLAKHKIETNK 679
Score = 87.0 bits (214), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 88/170 (51%), Gaps = 9/170 (5%)
Query: 48 QVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPYAQVIAFEELKPYGTNQY 107
Q+++IP +F +K Y S+ PLLEE R ++ S LEA+ P ++ E+ K Y
Sbjct: 2 QMKRIPSTFSDLKSYLESYTSPLLEEMRTEMSSSLEAISTMPSTKISWIEQKK--NNKVY 59
Query: 108 GIEVDY-WRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDE 166
I D +N+ + + E Y GDI++L+D KPE +SD+ R GR + V+ T DE
Sbjct: 60 DIVFDADSQNSKACNRPESYVPSVGDIIILSDVKPEHISDITRNGRPY-IVAFVTEGGDE 118
Query: 167 DENKKENRYKVKARNNM-----QVHDKTKKSFFFIYLTNILPNKRIWNSL 211
D++ +Y + + + + D+ + F YL NI+ RIW L
Sbjct: 119 DDDSPPVKYVIISSGKIDSEDGKCQDRKEIKLFAAYLLNIVTYIRIWRCL 168
>gi|115483164|ref|NP_001065175.1| Os10g0537600 [Oryza sativa Japonica Group]
gi|113639784|dbj|BAF27089.1| Os10g0537600, partial [Oryza sativa Japonica Group]
Length = 985
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 234/549 (42%), Positives = 332/549 (60%), Gaps = 43/549 (7%)
Query: 348 GDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHI 407
GDI+LFGNKDRL + ++YL+ R+ KL F GW+ S++ L +C+S+Y +
Sbjct: 1 GDIVLFGNKDRLHIGKELSKVYLDDRVHKLLRYFKREDGWKARVDSVMKFLMNCISRYQM 60
Query: 408 YVEKLKERED-CNVNQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCT 466
++ + D CN+ F KY +F V L CI F
Sbjct: 61 SLDIQQASSDGCNLT--------------------FKKYFTSKFSTLVKELARCIDTFFD 100
Query: 467 HLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKR- 525
HLP + N M+ KSLLD LL D+V + L +F S DE I +
Sbjct: 101 HLPTDSLGRN-LDRMMFAKSLLDKLQQLLCADDVSDELLFTIFKPS-DEPIDSFDSHDQT 158
Query: 526 --YLLQLHQR----------RSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLF 573
+ LH +S C+ L +L ++ LPC ++ + D C KRA L
Sbjct: 159 DDATVDLHDHDISLDDPLEIKSLCIKTLMDL----SKMRLPCEDNESSIRDLCLKRAKLV 214
Query: 574 FSTASSSYKLHSVE-IKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMV 632
F TASSS++L ++ + P++ LVIDEAAQLKE E+ +PL L GI H +LIGDE QL ++V
Sbjct: 215 FCTASSSFELFRLQNVMPISILVIDEAAQLKECEALVPLLLPGIEHILLIGDENQLSSLV 274
Query: 633 ESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK 692
+SKI+ +A FGRSL+ERL ++ + KHLL +QYRMHP I+ FPN FY N+I DG +V+ +
Sbjct: 275 KSKIAKDADFGRSLYERLCTMGYRKHLLEVQYRMHPGINKFPNANFYDNRISDGPSVQQE 334
Query: 693 SYEKQYLTGTEFGTYSFINIIGGRE--DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQK 750
Y K YL G +G YSFI+I E D + S +N+VEV+ I+++L K +Q+
Sbjct: 335 DYMKSYLPGPIYGAYSFIHIENDMEMLDELGQSSKNMVEVAVATNIVERLAKECSEKRQR 394
Query: 751 VSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGS 810
S+GV+SPYTAQV+A+++++G +++N + +V VKSIDGFQGGEEDII+ISTVR N G
Sbjct: 395 TSLGVISPYTAQVIALQERLGKQFKNHEFLSVTVKSIDGFQGGEEDIILISTVRSNKNGK 454
Query: 811 IGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLA 870
+GF+S R+NVALTRA++CLWILG+ TL++S SIW LV D+K R CFFNA +++NLA
Sbjct: 455 VGFLSDAGRINVALTRAKYCLWILGNGATLLASNSIWAELVHDSKRRGCFFNALDDKNLA 514
Query: 871 KARLEVSKE 879
+ + +KE
Sbjct: 515 EIIMHATKE 523
>gi|224143928|ref|XP_002336092.1| predicted protein [Populus trichocarpa]
gi|222872079|gb|EEF09210.1| predicted protein [Populus trichocarpa]
Length = 1079
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/434 (51%), Positives = 287/434 (66%), Gaps = 11/434 (2%)
Query: 442 FLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVV 501
F +++++ F+ L I THLP S IS + M+ L LL +V
Sbjct: 488 FEEFLKDSFEFLSAKLDFLISGLFTHLPTSIISLEVVKNMIRAVDSLRCLKPLLCSVSVG 547
Query: 502 SKELEKLFSHSVDEGISWA--FVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSK 559
+ L+++ D G S A F R ++ R++C+ L +L D N+ SK
Sbjct: 548 DEGLKQVLD-DFDNGGSSAGQFSRLSFM------RNDCIQTLNSLPRVFDIPNIFEVESK 600
Query: 560 LVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHA 619
+FC A L F TASSS KLH+ KP+ LVIDEAAQLKE ESTIPLQL+G+ HA
Sbjct: 601 AA-RNFCLGNACLVFCTASSSAKLHTERAKPIKLLVIDEAAQLKECESTIPLQLSGLRHA 659
Query: 620 VLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFY 679
+LIGDE QLPAMV+SKIS+EA FGRSLFERL L H KHLLN QYRMHPSISLFPN +FY
Sbjct: 660 ILIGDERQLPAMVQSKISEEAKFGRSLFERLVILEHEKHLLNTQYRMHPSISLFPNKEFY 719
Query: 680 RNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDF-IYHSCRNIVEVSAVIKILQ 738
I D +NVK ++Y+KQ+L G +G YSFIN+ G+E S +N+VEV+ V I+
Sbjct: 720 DMLIQDASNVKERNYQKQFLQGNMYGPYSFINVANGKEQSNDGRSKKNLVEVAVVSAIVA 779
Query: 739 KLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDII 798
L+K + +++++SIGV+SPY AQV AI++KIG Y F V V+S+DGFQG EED+I
Sbjct: 780 GLFKEFKRARKRMSIGVISPYNAQVYAIQQKIGNTYSTFSDFAVNVRSVDGFQGSEEDVI 839
Query: 799 IISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQ 858
IISTVRCN GS+GF+S QR NVALTRAR+CLWILG+ TL++S SIW LV DAK R
Sbjct: 840 IISTVRCNASGSVGFLSNRQRANVALTRARYCLWILGNGATLVNSGSIWKKLVTDAKERG 899
Query: 859 CFFNADEERNLAKA 872
CF+NADE+++L+KA
Sbjct: 900 CFYNADEDKSLSKA 913
Score = 219 bits (558), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 152/414 (36%), Positives = 224/414 (54%), Gaps = 48/414 (11%)
Query: 48 QVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPYAQV----IAFEELKPYG 103
QV+KIPE+F S Y SF+ L+EETR L S + + +AP ++ IA E +P
Sbjct: 9 QVKKIPETFMSTTHYMKSFIPALIEETRADLCSNMTMVSQAPTREIFLLRIAKENKRPKD 68
Query: 104 TNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVP 163
Y I + RN ++ G Y+ GD+L L D +P+ + DL R G + V +
Sbjct: 69 L-FYKIWFEKMRNNVNGEG--IYEPGVGDLLALTDVRPKDIGDLNRPGFNYLLAYVHGLS 125
Query: 164 DDEDENKKENRYKVKARNNMQ--VHDKTKK----------------SFFFIYLTNILPNK 205
+D+N K + + +Q + D+ K + F +YL N++ N
Sbjct: 126 LAKDDNDKYDILSILTSKPIQFELEDREIKKESVIAGKGRRKNMIANVFVVYLVNMMTNI 185
Query: 206 RIWNSLHM---CGNWKVITQVLGTDSVV----DERCELC--SVQRKGQWDEKFGPSFSST 256
RIW SL+ GN K+I VL T S V + C C V R SS+
Sbjct: 186 RIWRSLNSDLEGGNMKIIQNVLHTSSAVRRVDGQHCSHCLSEVNRNATLSGMEETIISSS 245
Query: 257 -LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPT 315
LN SQ A+++C+ +C H+S V+LIWGPPGTGKTK V +LL +LL++KCRTL C PT
Sbjct: 246 NLNFSQQDAIVSCIGLSECRHQSTVKLIWGPPGTGKTKMVGLLLFSLLKLKCRTLTCAPT 305
Query: 316 NVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNP--GFEEIYLNYR 373
N+A+ E+ SR+L+LV +S + + LGDI+LFGN R+K++ E+I+L++R
Sbjct: 306 NIAVLEVTSRLLRLVTDSLEYKTYG------LGDIVLFGNGKRMKISEKDDLEDIFLDHR 359
Query: 374 IKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKE 427
++ L CF P +GW+H S+I+LL D QY Y+E KER+ N+ E+E
Sbjct: 360 VEVLEYCFNPSTGWKHTVDSLINLLADPEHQYRRYLEN-KERK----NEEGERE 408
>gi|218195426|gb|EEC77853.1| hypothetical protein OsI_17109 [Oryza sativa Indica Group]
Length = 1402
Score = 402 bits (1033), Expect = e-108, Method: Compositional matrix adjust.
Identities = 297/905 (32%), Positives = 460/905 (50%), Gaps = 159/905 (17%)
Query: 43 SFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPYAQVIAFEELKPY 102
S + QV++IP++F S++ Y SF PL+EE + S L+ A + +V+ E+L
Sbjct: 112 SGYSSQVKRIPDTFSSLESYLDSFTCPLIEEVHADVFSSLDGYAHANFIEVVRMEKLD-- 169
Query: 103 GTNQ---YGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRVGRTWTFVSV 159
N+ +G EV + +E Y GDI+V++ KP+ VSDL + ++ SV
Sbjct: 170 --NEKFIFGFEVK--EPSKDEKSRETYDPTEGDIIVVSTQKPKHVSDLTQNKASYVLGSV 225
Query: 160 TTVPDDEDENKKENRYKVKARNNMQVHDKTK---KSFFFIYLTNILPNKRIWNSLHMCGN 216
DDED ++ + ++ +TK + F ++L N+ RIW L + N
Sbjct: 226 LKCGDDEDFPTDCCIVQLSSSIPVEADPETKMPKGAIFAVFLINMKTYNRIWKCLRLGAN 285
Query: 217 WKVITQVLGTDS--------------VVDERCELCSVQRKGQWD----EKFGPSFSSTLN 258
+ + S V D ++ + G D EK LN
Sbjct: 286 DGNLANLQNKSSTNMVNLVWQYKPKVVEDNSSQVSQCLKHGSMDFLGLEKL------NLN 339
Query: 259 ESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVA 318
SQ+ A+ C+ ++ S ++LIWGPPGTGKTKT+S +L +L +TL C PTN A
Sbjct: 340 ASQLNAVADCVSVME-NQLSSLKLIWGPPGTGKTKTISTILWAMLIKGRKTLTCAPTNTA 398
Query: 319 ITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFE--EIYLNYRIKK 376
I E+ASR+++LV+ S+ C L DI+LFGNK R+K++ G E I+L+ R ++
Sbjct: 399 ILEVASRIVRLVRGC------SDGSACFLSDIVLFGNKKRMKIDDGHELSVIFLDSRAER 452
Query: 377 LRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEK-LKEREDC-----------NV---- 420
L CF P +GWRHC S+IDLLE+ V++Y Y+E L++R+D NV
Sbjct: 453 LLPCFVPNTGWRHCLCSLIDLLENSVTKYKYYIEDVLEKRKDIEKETAEKDKGENVPWRM 512
Query: 421 ---NQSEEKEC-RKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISEN 476
N S EK+C R E + PF Y+++ + +L CI I + P++ +E
Sbjct: 513 QFGNGSCEKKCGRPEDKEEPSRLLPFKDYLKDGYNNLSQNLSYCIEILYNNHPRNSGTER 572
Query: 477 SFQEMVALKSLLDSFGNLL--FQDN--VVSKELEKLFSHSVDEGISWA----FVRKRYLL 528
SFQ M+ + L+ ++ ++ N + S EL + + + W+ V+ +
Sbjct: 573 SFQCMLEVLELIKILHGMINCYKGNADIWSDELLETMIEEDSDPVLWSEQLVSVQTSTCI 632
Query: 529 QLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSV-- 586
+ R + L V + L + L LP S ++ + +R T SSS++L++V
Sbjct: 633 KSKFRLARLLCV-QELKYLVKNLELPNCYSIQPIKLYLLQRTKCILCTVSSSFRLYNVPM 691
Query: 587 EIKP---------------LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAM 631
++ P L L++DEAAQLKE E+ IPL QLP +
Sbjct: 692 DVSPSGICGPFKQPEKANLLEMLIVDEAAQLKECETLIPL---------------QLPGI 736
Query: 632 VESK-ISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVK 690
++ I DE Y++ P++ +++I D A
Sbjct: 737 TQAVFIGDE------------------------YQL-PAL--------VKSKIADNAC-- 761
Query: 691 SKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCR---NIVEVSAVIKILQKLYKAWVGS 747
FG F + GG E +CR N +EV+ V++I+Q+L+K V +
Sbjct: 762 -------------FGRSVFERLNGGHET-TEKNCRSLKNTIEVATVLRIVQRLFKEAVST 807
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT 807
+ K+S+GVVSPY AQV AI++K+G Y DGF+VKVKS+DGFQG EEDIIIISTVR N
Sbjct: 808 QSKLSVGVVSPYNAQVRAIQEKVGKSYNMYDGFSVKVKSVDGFQGAEEDIIIISTVRSNG 867
Query: 808 GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEER 867
GS+GF++ QR NVALTRA+HCLWI+G+ TL +S+SIW ++ DA+ R CFF+A++++
Sbjct: 868 AGSVGFLTNLQRTNVALTRAKHCLWIVGNGTTLSNSKSIWQKIIKDAQDRGCFFDANDDK 927
Query: 868 NLAKA 872
+L+ A
Sbjct: 928 DLSNA 932
Score = 248 bits (633), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/263 (48%), Positives = 178/263 (67%), Gaps = 14/263 (5%)
Query: 615 GINHAVLIGDECQL--PAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISL 672
GI++ V + D+ + PA V + +G G R ++ S RMHP IS
Sbjct: 981 GISYGVGVKDDSPVAPPAAVLPRRGRPSGAGMLARPRTPAMAAS--------RMHPEISR 1032
Query: 673 FPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCR---NIVE 729
FP FY +I DG+NV SK+YE+++L FG YSFIN+ GG E +CR N +E
Sbjct: 1033 FPVATFYDGKISDGSNVTSKNYERKFLASKIFGPYSFINVDGGHET-TEKNCRSLKNTIE 1091
Query: 730 VSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDG 789
V+ V++I+Q+L+K V ++ K+S+GVVSPY AQV AI++K+G Y DGF+VKVKS+DG
Sbjct: 1092 VATVLRIVQRLFKEAVSTQSKLSVGVVSPYNAQVRAIQEKVGKSYNMYDGFSVKVKSVDG 1151
Query: 790 FQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGA 849
FQG EEDIIIISTVR N GS+GF++ QR NVALTRA+HCLWI+G+ TL +S+SIW
Sbjct: 1152 FQGAEEDIIIISTVRSNGAGSVGFLTNLQRTNVALTRAKHCLWIVGNGTTLSNSKSIWQK 1211
Query: 850 LVCDAKARQCFFNADEERNLAKA 872
++ DA+ R CFF+A+++++L+ A
Sbjct: 1212 IIKDAQDRGCFFDANDDKDLSNA 1234
>gi|302143703|emb|CBI22564.3| unnamed protein product [Vitis vinifera]
Length = 944
Score = 401 bits (1031), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/353 (58%), Positives = 257/353 (72%), Gaps = 13/353 (3%)
Query: 537 CLSVLRNLWNSLDELNLPCTTSKLV--LEDFCFKRASLFFSTASSSYKLHSVEIKPLNFL 594
CL +L+ L +L P T L +++FC ASL F TASSS KLH +KP L
Sbjct: 416 CLQILKCLHQTL-----PVPTIFLYDEIKNFCLCNASLIFCTASSSAKLHMAGMKPFELL 470
Query: 595 VIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLN 654
VIDEAAQLKE ES IPLQLAG+ HA+L+GDE QLPAMV+SKIS A FGRSLFERL SL
Sbjct: 471 VIDEAAQLKECESAIPLQLAGLRHAILVGDELQLPAMVKSKISTSAEFGRSLFERLVSLG 530
Query: 655 HSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII- 713
H KHLLN+QYRMHPSISLFPN +FY N+I D NVK +SY++ +L G +G+YSFIN+
Sbjct: 531 HRKHLLNLQYRMHPSISLFPNQEFYNNKISDAPNVKERSYKRCFLQGDMYGSYSFINVAY 590
Query: 714 GGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFE 773
G E HS RN+VEV AV +I+ KL+K V +KQKVS+GV+SPY AQV AI++K+G
Sbjct: 591 GNEEQSNSHSTRNMVEVVAVSEIVAKLFKESVANKQKVSVGVISPYNAQVFAIQEKLGKT 650
Query: 774 YENK--DGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
Y F+V V+S+DGFQGGEED+IIISTVR N G +GF+S QR NVALTRARHCL
Sbjct: 651 YSTSTHSDFSVSVRSVDGFQGGEEDVIIISTVRSNLNGKVGFLSNRQRANVALTRARHCL 710
Query: 832 WILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIG 884
WILG+ TL +S +IW LV +AKAR CF+NA++++NLA+A ++ LVE G
Sbjct: 711 WILGNGPTLANSGTIWTKLVSNAKARGCFYNAEDDKNLAQA---IATSLVEHG 760
Score = 274 bits (701), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 153/406 (37%), Positives = 226/406 (55%), Gaps = 37/406 (9%)
Query: 9 EMMEGKGCSSSSKKAVGFAGHTVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVF 68
E M+G+ ++ + V VFSWSL D+ + +++V KIP++F S Y SF+
Sbjct: 2 ERMQGRKAENADRSLVDL----VFSWSLRDVLYKDLHRNKVRKIPDTFLSTSHYLTSFIN 57
Query: 69 PLLEETRMQLRSGLEAMRRAPYAQVIAFE---ELKPYGTNQYGIEVDYWRNTISNSG-KE 124
PL+EET L S + + RAP +V++ + + KP Y I + R+T + +G E
Sbjct: 58 PLIEETHADLSSSMTTLARAPICEVLSVKISKDFKPPRDLFYEISLKRLRDTANEAGIYE 117
Query: 125 PYKTLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQ 184
P K GD++ D +P+ +SDL R R + E R + + +
Sbjct: 118 PEK---GDLIAFTDVRPKSISDLDRPKRPYVIALCF-----------EQRMAMDHKRETE 163
Query: 185 VHDKTKKSFFFIYLTNILPNKRIWNSLHMC---GNWKVITQVLGTDSVVDERCELCSVQR 241
DK K++ F ++LTN+ N RIW +LH+ GN +I +VL +DS + C LC
Sbjct: 164 A-DKKKETLFAVFLTNMTTNIRIWTALHLGQERGNMSLIQKVLQSDSSAENTCTLCFSNP 222
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
WD P LN+SQ A+ +C+ C H++ V+LIWGPPGTGKTKTV LL
Sbjct: 223 ASVWDPITCPF---NLNDSQQAAVSSCIAARKCDHQNSVKLIWGPPGTGKTKTVGTLLFV 279
Query: 302 LLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKV 361
L R+KCRT+ C PTN+A+ E+ +R+++LV+ES + S LGDI+LFGN +R+K+
Sbjct: 280 LFRMKCRTVTCAPTNIAVIEVTTRLVRLVRESIECGSYG------LGDIVLFGNGERMKI 333
Query: 362 NP--GFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQY 405
+ +++LN+RI L CFAPLSGW+H SMI LLED Y
Sbjct: 334 DKHDDLLDVFLNFRINILARCFAPLSGWKHSIESMISLLEDPEEMY 379
>gi|302143704|emb|CBI22565.3| unnamed protein product [Vitis vinifera]
Length = 960
Score = 395 bits (1014), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/358 (58%), Positives = 265/358 (74%), Gaps = 10/358 (2%)
Query: 530 LHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIK 589
L + R + L +LR L +++ +P TT ++ FC + A+L F TASSS K+ V K
Sbjct: 441 LKETRRKFLEILRCLRQAIE---VPNTTDHYRIKSFCLQNATLLFCTASSSAKI-PVGGK 496
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P+ LVIDEAAQLKE ES IPLQ++GI HA+LIGDE QLPAMV+SKIS+EA FGRSLF+R
Sbjct: 497 PIELLVIDEAAQLKECESAIPLQISGIRHAILIGDELQLPAMVKSKISEEAKFGRSLFQR 556
Query: 650 LTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSF 709
L L H KHLLN+QYRMHPSISLFPN +FY N ILD NVK + YE+ YL G +G+YSF
Sbjct: 557 LVLLGHRKHLLNLQYRMHPSISLFPNREFYDNLILDAPNVKERKYERSYLHGNMYGSYSF 616
Query: 710 INIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
IN+ G+E+F Y +S RN+VEV V +++ L KA G KQ+VS+G++SPY AQV AI+
Sbjct: 617 INVAYGKEEFDYRYSTRNMVEVVVVSEMVATLAKATKGRKQRVSVGIISPYKAQVYAIQD 676
Query: 769 KIGFEY-ENKDG-FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTR 826
++G +Y + DG F+V V+S+DGFQGGEEDIIIISTVRCN GS+GFIS QR NVALTR
Sbjct: 677 RLGKKYTSSADGKFSVSVRSVDGFQGGEEDIIIISTVRCNLKGSVGFISNRQRTNVALTR 736
Query: 827 ARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIG 884
AR+CLWI G+ TL S ++WG LV DAK R CF NA+E+ NLA+A ++ LVE+G
Sbjct: 737 ARYCLWIFGNGPTLEHSGTVWGKLVNDAKDRGCFHNAEEDNNLARA---ITTSLVELG 791
Score = 268 bits (686), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 171/511 (33%), Positives = 272/511 (53%), Gaps = 84/511 (16%)
Query: 3 QESQSEEMMEGKGCSSSSKKAVGFAGHTVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQY 62
QES+ E + K ++ K +G VFSWSL+DI +++ +K++V+ IP++F SV Y
Sbjct: 11 QESKMERK-QWKKAETAPKDLMGL----VFSWSLKDILNKNLYKNKVKMIPDTFLSVSHY 65
Query: 63 FGSFVFPLLEETRMQLRSGLEAMRRAPYAQVIAFEELKPY--GTN-QYGIEVDYWRNTIS 119
SF++PL+EET L S + + +AP ++++ E K Y TN +Y I + RN +
Sbjct: 66 LTSFIYPLIEETHADLLSSMTMVSQAPLCEILSVETTKDYEPPTNLKYKITLKVIRNNGN 125
Query: 120 NSGKEPYKTLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKA 179
++ E Y+ GD++ L D +P+ +SDL R ++T S P + ++N + N
Sbjct: 126 DA--EIYEPETGDLIALTDVRPKCISDLNRPKISYTVAS----PIEFEQNMETN------ 173
Query: 180 RNNMQVHDKTKKSFFFIYLTNILPNKRIWNSLHM---CGNWKVITQVLGTDSVVDERCEL 236
K +K+ F ++L N++ N RIW +L++ GN +I +VL DS+ E C L
Sbjct: 174 --------KKRKTLFAVFLINMITNNRIWAALNIGPDLGNKSIIQKVLQPDSLAGEECAL 225
Query: 237 CSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVS 296
CS E SF LN+SQ A+L+C+ +C H++ ++ IWGPPGTGKTKTV+
Sbjct: 226 CSSDSVSN-SEPMVSSFD--LNDSQKAAVLSCIAARECHHQNSIKQIWGPPGTGKTKTVA 282
Query: 297 MLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNK 356
LL L R+KCRT+ C PTN+A+ + R++ LV++S + + LGDILLFGN
Sbjct: 283 TLLFALYRMKCRTVTCAPTNIAVLTVTERLVGLVRDSNEYGTYG------LGDILLFGNG 336
Query: 357 DRLKVNP--GFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKE 414
R+K++ +++L++R+K L CF+P SGW+H SMI LLED Y Y L+E
Sbjct: 337 KRMKIDDHRDLHDVFLDFRVKILANCFSPRSGWKHSLESMICLLEDPKEMYSTY---LRE 393
Query: 415 R-------------EDCNVNQSEEKECRK--------------ETEGSKGERKPFLKYVR 447
R +D N + + + E++G K R+ FL+ +R
Sbjct: 394 RMNQGKGKGKGKKQQDKNSEGATDGSSHRLLESFITLFQNVSVESKGLKETRRKFLEILR 453
Query: 448 ------------ERFKCAVVSLRNCIFIFCT 466
+ ++ L+N +FCT
Sbjct: 454 CLRQAIEVPNTTDHYRIKSFCLQNATLLFCT 484
>gi|302143702|emb|CBI22563.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 389 bits (998), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/352 (57%), Positives = 260/352 (73%), Gaps = 10/352 (2%)
Query: 536 ECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLV 595
ECL L+ L ++ LP + ++ FC ++A L F TASSS KL + P+ LV
Sbjct: 439 ECLQSLKCL---CKKITLPNFYTDDKIKKFCLEKACLLFCTASSSVKLKMKGMTPVELLV 495
Query: 596 IDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNH 655
IDEAAQLKE ESTIPLQ++G+ HA+L+GDE QLPA+V+SKIS++AGFGRSLFERL L H
Sbjct: 496 IDEAAQLKECESTIPLQISGLRHAILVGDEMQLPALVKSKISEKAGFGRSLFERLVLLKH 555
Query: 656 SKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGG 715
HLLNIQYRMHPSIS FPN +FY NQI D NVK +SYEKQ+L G+ +G YSF+N+ G
Sbjct: 556 EYHLLNIQYRMHPSISFFPNKEFYENQISDAPNVKDRSYEKQFLQGSMYGPYSFVNVAYG 615
Query: 716 REDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEY- 774
+E+F HS RN+VEV+ V +++ L+K V KQKVS+GV+SPY AQV+AI++K+G Y
Sbjct: 616 KEEFENHSSRNMVEVAVVSEVVTSLFKESVSKKQKVSVGVISPYKAQVIAIQEKLGKIYN 675
Query: 775 --ENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLW 832
E +D F+VKV ++DGFQGGEED+IIISTVR N G +GF+SK QR NV+LTRARHCLW
Sbjct: 676 TDEERD-FSVKVCTVDGFQGGEEDVIIISTVRGNEKGLVGFLSKRQRANVSLTRARHCLW 734
Query: 833 ILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIG 884
I G TL++S ++W +V DAK R CF+NA E+NLA+A ++ LVE G
Sbjct: 735 IFGESETLVASGTVWKRVVEDAKERGCFYNASAEKNLAQA---MAISLVEQG 783
Score = 246 bits (628), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 153/412 (37%), Positives = 224/412 (54%), Gaps = 28/412 (6%)
Query: 21 KKAVGFAGH---TVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQ 77
++ G G+ VFSWSL+++ ++F+K QV KIP F S Y SF+ LLEE R
Sbjct: 7 RRVTGTGGNLTDVVFSWSLDNVLDENFYKRQVGKIPMEFLSKPVYMTSFIPALLEEIRAD 66
Query: 78 LRSGLEAM-----RRAPYAQVIAFEELKPYGT--NQYGIEVDYWRNTISNSGKEPYKTLP 130
L S ++ + P +V EE YG N Y I + R ++ + YK
Sbjct: 67 LLSSMKTVFEDHASDPPVREVQFVEESTRYGPPKNLYNISLKGER--VAENDAVTYKPEN 124
Query: 131 GDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTK 190
GDI+ L D +P + D +R R++ + D DE + + ++ NMQ D +
Sbjct: 125 GDIIALTDTRPNSIDDSKRSERSYLIAFIQGSRKDSDEFQIVSSKPIEFEQNMQ-EDGKR 183
Query: 191 KSFFFIYLTNILPNKRIWNSLHMC---GNWKVITQVLGTDSVVDERCELCSVQRKGQWDE 247
+ + ++L N+ N IWNSL G+ +I +VL +S RC++CS G +
Sbjct: 184 NTLYAVFLINLTTNICIWNSLTQGLQGGSMAIIEKVLRPNSYAGGRCKICS---SGSVSD 240
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC 307
S LN SQ A+L+CL +C H++ VELI GPPGTGKT TV LL LL +KC
Sbjct: 241 SVARINSFKLNRSQKAAVLSCLATANCHHQNSVELIKGPPGTGKTNTVGSLLCALLGMKC 300
Query: 308 RTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKV--NPGF 365
RTLAC PTN+A+ E+A+RVL LV+ES + D+ LGDI+LFG+ + + + +
Sbjct: 301 RTLACAPTNIAVLEVAARVLSLVEESLEYDAYG------LGDIVLFGSSEGMNIDDDSDL 354
Query: 366 EEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKERED 417
+++L+ R + L CFA SGW+HC SMI+LLE + H +E KERE+
Sbjct: 355 HDVFLDTRARILVRCFARHSGWKHCLESMINLLEG-TKEDHEKLEICKEREE 405
>gi|222629427|gb|EEE61559.1| hypothetical protein OsJ_15907 [Oryza sativa Japonica Group]
Length = 767
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 254/698 (36%), Positives = 383/698 (54%), Gaps = 76/698 (10%)
Query: 140 KPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTK---KSFFFI 196
KP+ VSDL + ++ SV DDED ++ + ++ +TK + F +
Sbjct: 5 KPKHVSDLTQNKASYVLGSVLKCGDDEDFPTDCCIVQLSSSIPVEADPETKMPKGAIFAV 64
Query: 197 YLTNILPNKRIWNSLHMCGNWKVITQVLGTDS--------------VVDERCELCSVQRK 242
+L N+ RIW L + N + + S V D ++ +
Sbjct: 65 FLINMKTYNRIWKCLRLGANDGNLANLQNKSSTNMVNLVRQYKPKVVEDNSSQVSQCLKH 124
Query: 243 GQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTL 302
G D F LN SQ+ A+ C+ ++ S ++LIWGPPGTGKTKT+S +L +
Sbjct: 125 GSMD--FLGLEKLNLNASQLNAVADCVSVME-NQLSSLKLIWGPPGTGKTKTISTILWAM 181
Query: 303 LRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVN 362
L +TL C PTN +I E+ASR+++LV+ S+ C L DI+LFGNK R+K++
Sbjct: 182 LIKGRKTLTCAPTNTSILEVASRIVRLVRGC------SDGSACFLSDIVLFGNKKRMKID 235
Query: 363 PGFE--EIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEK-LKEREDC- 418
G E I+L+ R ++L CF P +GWRHC S+IDLLE+ V++Y Y+E L++R+D
Sbjct: 236 DGHELSVIFLDSRAERLLPCFVPNTGWRHCLCSLIDLLENSVTKYKYYIEDVLEKRKDIE 295
Query: 419 ----------NV-------NQSEEKECRKETEGSKGERK-PFLKYVRERFKCAVVSLRNC 460
NV N S EK+C + + + R PF Y+++ + +L C
Sbjct: 296 KETAEKDKGENVPWRMQFGNGSCEKKCGRPEDKEEASRLLPFKYYLKDGYNNLSQNLSYC 355
Query: 461 IFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLL--FQDN--VVSKELEKLFSHSVDEG 516
I I + P++ +E SFQ M+ + L+ ++ ++ N + S EL + +
Sbjct: 356 IEILYNNHPRNSGTERSFQCMLEVLELIKILHGMINCYKGNADIWSDELLETMIEEDSDP 415
Query: 517 ISWA----FVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASL 572
+ W+ V+ ++ R + L V + L + L LP S ++ + +R
Sbjct: 416 VLWSEQLVSVQTSTCIKSKFRLARLLCV-QELKYLVKNLELPNYYSIQPIKLYLLQRTKC 474
Query: 573 FFSTASSSYKLHSV--EIKP---------------LNFLVIDEAAQLKESESTIPLQLAG 615
T SSS++L++V ++ P L L++DEAAQLKE E+ IPLQL G
Sbjct: 475 ILCTVSSSFRLYNVPMDVSPSGICGPFKQPEKANLLEMLIVDEAAQLKECETLIPLQLPG 534
Query: 616 INHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPN 675
I AVLIGDE QLPA+V+SKI+D A FGRS+FERL+ L +SKHLLN+QYRMHP IS FP
Sbjct: 535 ITQAVLIGDEYQLPALVKSKIADNAFFGRSVFERLSLLGYSKHLLNVQYRMHPEISRFPV 594
Query: 676 LQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYH--SCRNIVEVSAV 733
FY +I DG+NV SK+YE+++L FG YSFIN+ GG E + S +N +EV+ V
Sbjct: 595 ATFYDGKISDGSNVTSKNYERKFLASKIFGPYSFINVDGGHETAEKNGRSLKNTIEVATV 654
Query: 734 IKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
++I+Q+L+K V ++ K+S+GVVSPY AQV AI++K+G
Sbjct: 655 LRIVQRLFKEAVSTQSKLSVGVVSPYNAQVRAIQEKVG 692
>gi|38346801|emb|CAD41369.2| OSJNBa0088A01.8 [Oryza sativa Japonica Group]
Length = 893
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 274/835 (32%), Positives = 420/835 (50%), Gaps = 156/835 (18%)
Query: 31 VFSWSLEDIFSQSFFK---------------------DQVEKIPESFQSVKQYFGSFVFP 69
VFSWS+ DIF++ K QV++IP++F S++ Y SF P
Sbjct: 46 VFSWSIRDIFNRDLLKHQGGYAYLLAVVRANQPSGYSSQVKRIPDTFSSLESYLDSFTCP 105
Query: 70 LLEETRMQLRSGLEAMRRAPYAQVIAFEELKPYGTNQ---YGIEVDYWRNTISNSGKEPY 126
L+EE + S L+ A + +V+ E+L N+ +G EV + +E Y
Sbjct: 106 LVEEVHADVFSSLDGYAHANFIEVVRMEKLD----NEKFIFGFEVS--EPSKDEKSRETY 159
Query: 127 KTLPGDILVLADFKPEKVS----DLRRVGRTWTFVSVTT-VPDDEDENKKENRYKVKARN 181
GDI+ ++ KP+ V ++ R V +++ +P + D K
Sbjct: 160 DPTEGDIIAMSTQKPKHVRFSNVEMMRFPTDCCIVQLSSSIPVEADPETK---------- 209
Query: 182 NMQVHDKTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDS------------- 228
K + F ++L N+ RIW L + N + + S
Sbjct: 210 ------MPKGAIFAVFLINMKTYNRIWKCLRLGANDGNLANLQNKSSTNMVNLVRQYKPK 263
Query: 229 -VVDERCELCSVQRKGQWD----EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELI 283
V D ++ + G D EK LN SQ+ A+ C+ ++ S ++LI
Sbjct: 264 VVEDNSSQVSQCLKHGSMDFLGLEKLN------LNASQLNAVADCVSVME-NQLSSLKLI 316
Query: 284 WGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTP 343
WGPPGTGKTKT+S +L +L +TL C PTN +I E+ASR+++LV+ S+
Sbjct: 317 WGPPGTGKTKTISTILWAMLIKGRKTLTCAPTNTSILEVASRIVRLVRGC------SDGS 370
Query: 344 ICPLGDILLFGNKDRLKVNPGFE--EIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDC 401
C L DI+LFGNK R+K++ G E I+L+ R ++L CF P +GWRHC S+IDLLE+
Sbjct: 371 ACFLSDIVLFGNKKRMKIDDGHELSVIFLDSRAERLLPCFVPNTGWRHCLCSLIDLLENS 430
Query: 402 VSQYHIYVEK-LKEREDC-----------NV-------NQSEEKECRKETEGSKGERK-P 441
V++Y Y+E L++R+D NV N S EK+C + + + R P
Sbjct: 431 VTKYKYYIEDVLEKRKDIEKETAEKDQGENVPWRMQFGNGSCEKKCGRPEDKEEASRLLP 490
Query: 442 FLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLL--FQDN 499
F Y+++ + +L CI I + P++ +E SFQ M+ + L+ ++ ++ N
Sbjct: 491 FKYYLKDGYNNLSQNLSYCIEILYNNHPRNSGTERSFQCMLEVLELIKILHGMINCYKGN 550
Query: 500 --VVSKELEKLFSHSVDEGISWA----FVRKRYLLQLHQRRSECLSVLRNLWNSLDELNL 553
+ S EL + + + W+ V+ ++ R + L V + L + L L
Sbjct: 551 ADIWSDELLETMIEEDSDPVLWSEQLVSVQTSTCIKSKFRLARLLCV-QELKYLVKNLEL 609
Query: 554 PCTTSKLVLEDFCFKRASLFFSTASSSYKLHSV--EIKP---------------LNFLVI 596
P S ++ + +R T SSS++L++V ++ P L L++
Sbjct: 610 PNYYSIQPIKLYLLQRTKCILCTVSSSFRLYNVPMDVSPSGICGPFKQPEKANLLEMLIV 669
Query: 597 DEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHS 656
DEAAQLKE E+ IPLQL GI AVLIGDE QLPA+V+SKI+D A FGRS+FERL+ L +S
Sbjct: 670 DEAAQLKECETLIPLQLPGITQAVLIGDEYQLPALVKSKIADNAFFGRSVFERLSLLGYS 729
Query: 657 KHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGR 716
KHLLN+QYRMHP IS FP FY +I DG+NV ++ GR
Sbjct: 730 KHLLNVQYRMHPEISRFPVATFYDGKISDGSNVTTEK--------------------NGR 769
Query: 717 EDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
S +N +EV+ V++I+Q+L+K V ++ K+S+GVVSPY AQV AI++K+G
Sbjct: 770 ------SLKNTIEVATVLRIVQRLFKEAVSTQSKLSVGVVSPYNAQVRAIQEKVG 818
>gi|357491677|ref|XP_003616126.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
gi|355517461|gb|AES99084.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
Length = 1046
Score = 375 bits (964), Expect = e-100, Method: Compositional matrix adjust.
Identities = 218/464 (46%), Positives = 291/464 (62%), Gaps = 29/464 (6%)
Query: 444 KYVRERFKCAVVSLRNCIFIFCTHLPKSYISENS-FQEMVALKSLLDSFGNLLFQDNVVS 502
++V++R+ L+ + H+PKS+IS N+ Q + +LKSL S F+ V
Sbjct: 590 QFVKQRYLELREKLKFLLLTLYIHMPKSFISVNNILQALDSLKSLEISLSQAKFKQAVDD 649
Query: 503 KELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVL 562
E +E I F R +CL +L L S+ +LP + +
Sbjct: 650 CE---------EESIPACFGPSSL------ERKDCLHILSFLSKSI---SLPDFKVRHQV 691
Query: 563 EDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLI 622
E FC ASL T SSS KL+S E P+ FLVIDEAA LKE ESTIPLQL G+ H +LI
Sbjct: 692 EKFCLSNASLILCTVSSSIKLYSEEKSPVKFLVIDEAAMLKECESTIPLQLPGLCHCILI 751
Query: 623 GDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQ 682
GDE QLPA+V+SKI+DE FGRS+FERL + + +H+LN+QYRMHPSISLFP +FY +
Sbjct: 752 GDERQLPALVKSKIADECEFGRSMFERLVTSGYKRHMLNVQYRMHPSISLFPCKEFYDGK 811
Query: 683 ILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIY-HSCRNIVEVSAVIKILQKLY 741
I D V + Y K +L G + +YSFINI G+E F +S +N+VEV+ + KIL+ L
Sbjct: 812 ISDAVIVGKEKYNKHFLEGKMYASYSFINIAKGKEQFGRENSLKNMVEVAVISKILESLK 871
Query: 742 KAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKD-GFTVKVKSIDGFQGGEEDIIII 800
++ +K+KVSIG++SPY AQV I++K+ D F+V V+S+DGFQGGEEDIIII
Sbjct: 872 HEFMRTKKKVSIGIISPYNAQVFEIQEKVKQYIAVSDTDFSVSVRSVDGFQGGEEDIIII 931
Query: 801 STVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
STVR N G +GF+S QRVNVA+TRAR+CLWILG+ TLI+S+S+W +V DAK R CF
Sbjct: 932 STVRSNESGKVGFLSNRQRVNVAITRARYCLWILGNAATLINSDSVWRNVVLDAKRRDCF 991
Query: 861 FNADEERNLAKARLEVSKELVEI----GAES-LTSTSQGGKKEE 899
NA E + LA+A ++ L EI G+ES S GGK E+
Sbjct: 992 HNAAENKKLARA---INDVLFEIKLLDGSESPFKKLSLGGKSEK 1032
Score = 212 bits (540), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 148/465 (31%), Positives = 233/465 (50%), Gaps = 39/465 (8%)
Query: 2 KQESQSEEMMEGKGCSSSSKKAVGFAGHTVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQ 61
++ S + ME S +G V SW+LED +++ +KD+V KIPE+F+S
Sbjct: 24 RRSSPPSQRMEKTRNGSEENLKLGSLIDIVLSWTLEDALNENLYKDKVHKIPETFKSATD 83
Query: 62 YFGSFVFPLLEETRMQLRSGLEAMRRAPYAQVIAFEELKPYGTNQYGIEVDYWRNTISNS 121
Y SF+ L EETR L S L + +A ++ E K + + + +TI
Sbjct: 84 YKNSFIPLLFEETRADLSSSLSGVSQAALCEIKNVEHSKQLKLRKAQNQFIQFHHTIWLK 143
Query: 122 GKEPYKTLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARN 181
Y+ GD++ + +P+ ++DL + + + + +N+ +R V +
Sbjct: 144 STTDYEPASGDLIAITYIRPKSLNDLNTLNSPYHIAYL-----NGGKNRFSDRITVLSSK 198
Query: 182 NMQVHDKT------KKSFFFIYLTNILPNKRIWNSLH---MCGNWKVITQVLGTDSVVDE 232
M++ T + + +Y+ N+ N RIW +LH + +I +VL + E
Sbjct: 199 CMKMDVDTLSRKNNTQKMYVVYIMNMTTNVRIWKALHSKSKGDHLNIIEKVLQPNLNSGE 258
Query: 233 RCELCSVQRKGQWDEKFGPSF-------SSTLNESQVGAMLACLRRLDCGHRSGVELIWG 285
C++C Q SF S LNESQ A+ +C+R +DC H + +LIWG
Sbjct: 259 NCKICMSGSNSQ------ASFITKDIIRSQNLNESQQDAVTSCVRMVDCSH-ANTKLIWG 311
Query: 286 PPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPIC 345
PPGTGKTKTV+ LL +LL++K RTL C PTN AI ++A R+ LV +S D+
Sbjct: 312 PPGTGKTKTVACLLFSLLKLKSRTLTCAPTNTAILQVAIRLHSLVTDSLDHDTYG----- 366
Query: 346 PLGDILLFGNKDRLKVN--PGFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVS 403
LGDI+LFGN R+KV+ PG E+I+L+YR+K L +C+A W H ++I+ L D
Sbjct: 367 -LGDIVLFGNGKRMKVDSYPGLEDIFLDYRVKNLMQCYAE---WNHSLVAIIEFLSDPSK 422
Query: 404 QYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPFLKYVRE 448
QY + + K D N + K +G+ G F YV++
Sbjct: 423 QYFLEMSKKDFVMDKNRILASAYHAYKINKGNHGLIMRFENYVQK 467
>gi|356551976|ref|XP_003544348.1| PREDICTED: uncharacterized protein LOC100806346 [Glycine max]
Length = 975
Score = 365 bits (936), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 191/427 (44%), Positives = 281/427 (65%), Gaps = 24/427 (5%)
Query: 444 KYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSK 503
+++ ERF L + I THLPKS++S +M ++K +L S + L
Sbjct: 544 QFIVERFGEFAAKLMFFMQILYTHLPKSFLSLEVVMKMFSVKDILTSLESKL-------- 595
Query: 504 ELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLE 563
KL E K + +CLS+LR++ +++ + +K +E
Sbjct: 596 ---KLILCGCKE-------EKNIIDCFQSSSGKCLSMLRSVSSAIPNTDF---LAKGGIE 642
Query: 564 DFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIG 623
FC + AS+ TAS S KL++ ++ P+ +++IDEAAQLKE ES IPL+L G+ H +L+G
Sbjct: 643 KFCLQNASIILCTASGSIKLYAEDMTPIKYVIIDEAAQLKECESVIPLKLPGLKHIILVG 702
Query: 624 DECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQI 683
DE QLPA+V+SKI+++A FGRSLFERL L SKH+LN+QYRMHPSISLFP +FY +I
Sbjct: 703 DEKQLPALVKSKIAEKADFGRSLFERLVLLGDSKHMLNVQYRMHPSISLFPFSEFYDEKI 762
Query: 684 LDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIY--HSCRNIVEVSAVIKILQKLY 741
DG NV +SY +++L G +G+YSFIN+ G+E F +S +N+VE + + +I++ L
Sbjct: 763 SDGPNVLERSYNERFLEGEMYGSYSFINVSKGKEQFGRGGYSSKNMVEAAVISEIIRSLK 822
Query: 742 KAWVGSKQKVSIGVVSPYTAQVVAIRKKI-GFEYENKDGFTVKVKSIDGFQGGEEDIIII 800
K ++ S++KVSIG++SPY AQV I++K+ + + F+ V+S+DGFQGGEEDIIII
Sbjct: 823 KEYLRSRKKVSIGIISPYNAQVYEIKEKVEKYNSVSFPDFSFSVRSVDGFQGGEEDIIII 882
Query: 801 STVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
STVR N G +GF+S QR NVALTRAR+CLWI+G+ TL++S+S+W +V DAK R CF
Sbjct: 883 STVRSNGSGKVGFLSNRQRANVALTRARYCLWIIGNATTLVNSDSVWRKVVLDAKIRDCF 942
Query: 861 FNADEER 867
+NA++++
Sbjct: 943 YNAEDDK 949
Score = 219 bits (559), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 150/413 (36%), Positives = 211/413 (51%), Gaps = 46/413 (11%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
VFSWSL+D ++ +K +V++IPE+F S Y SF+ PL+EETR L S L+ + RAP
Sbjct: 55 VFSWSLKDALNEDLYKHKVQRIPETFMSTSDYLNSFIPPLIEETRSDLCSSLKGVSRAPI 114
Query: 91 AQ---VIAFEELKPYGTNQYGIEVDYWRNTISNSGKE---PYKTLPGDILVLADFKPEKV 144
+ VI K + Y I++ + + + KE Y+ PGDI D +P+ +
Sbjct: 115 CEIWTVIRDRFFKLPNSLFYLIKLKTRTDEVEDEVKEDIGSYEPEPGDIFAFTDIRPKNI 174
Query: 145 SDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVH------------------ 186
DL + R + V +D N E + M +
Sbjct: 175 GDL--INRPKLSYVIAYVCGRKDANTNEIPIRASKCLEMDIEFEFSRLNKNETTQLRSYI 232
Query: 187 ------DKTKKSFFFIYLTNILPNKRIWNSLHMCG---NWKVITQVLGTDSVVDERCELC 237
TK+ + YL N+ N RIW +L G N +I VL D C+ C
Sbjct: 233 EETNQPRNTKQKLYATYLLNLTTNIRIWKALKYKGEEANMNIIKDVLQPDLSRGVDCQNC 292
Query: 238 SVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSM 297
++ K+ P S LNESQ A+ +CL C H +LIWGPPGTGKTKT++
Sbjct: 293 KCRKSVIPVCKWYPLRSQNLNESQEVAISSCLTM--CDHMV-TKLIWGPPGTGKTKTLAC 349
Query: 298 LLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKD 357
LL LLR++ RTLAC PTN A+ E+A+R+ LV S D+ LGDI+LFGNK
Sbjct: 350 LLRCLLRVRHRTLACAPTNTAVLEVAARLRNLVNGSLGFDTYG------LGDIVLFGNKS 403
Query: 358 RLKVN--PGFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIY 408
R+KV+ G +++L++R++ L +CF PLSGW+H SMI LLED QY Y
Sbjct: 404 RMKVDSYTGLRDVFLDHRVQNLSKCFDPLSGWKHYLESMIQLLEDPKEQYSSY 456
>gi|413919136|gb|AFW59068.1| hypothetical protein ZEAMMB73_252554 [Zea mays]
Length = 1056
Score = 363 bits (932), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 218/491 (44%), Positives = 299/491 (60%), Gaps = 36/491 (7%)
Query: 421 NQSEEKECRKETEGSKGERKP-FLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQ 479
N +EC K E + P F Y+R+ +K +L +CI I P++ + SFQ
Sbjct: 550 NDCGNEECYKSGEAEEAVIVPSFKDYLRDEYKKLSGNLYDCIKILYNDHPRNPETGRSFQ 609
Query: 480 EMVALKSLLDSFGNLLFQD----NVVSKELEKLFSHSVDE--GISW----AFVRKRYL-- 527
M+ + L+ L+ D ++ S+EL L S DE +W A V+
Sbjct: 610 CMMEVLELIKILYALINSDVDDGDICSEEL--LASKVEDEWDPETWPEKLATVKTNSCNK 667
Query: 528 LQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVE 587
L+ RS + LR L +L N C S +E + RA T SSS++L++V
Sbjct: 668 LKFSLARSMFVQELRYLCTNLVLPNCYCARS---VEQYLLARAKCILCTVSSSFRLYNVP 724
Query: 588 I------------KP----LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAM 631
+ KP L L++DEAAQ+KE E+ IPLQL GI A+LIGDE QLPA+
Sbjct: 725 MRYSSSGLCGLPTKPENISLELLIVDEAAQVKECETLIPLQLPGIKQAILIGDEYQLPAL 784
Query: 632 VESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKS 691
V+SKISD A FGRS+FERL+SL +SKHLLN+QYRMHP IS FP +FY +I DG NV
Sbjct: 785 VKSKISDSAKFGRSVFERLSSLGYSKHLLNVQYRMHPEISKFPVSKFYGGKISDGPNVTH 844
Query: 692 KSYEKQYLTGTEFGTYSFINIIGGRE--DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQ 749
K+Y K++L G FG YSFIN+ G E + S +N +EV V +++Q+LY V ++
Sbjct: 845 KNYGKRFLAGKWFGPYSFINVDCGHETTEKNARSLKNTIEVVVVARMVQRLYNETVSTRT 904
Query: 750 KVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGG 809
K+S+GVVSPY AQV AI++++ Y + DGF+VKVKS+DGFQG EEDIIIISTVR N G
Sbjct: 905 KLSVGVVSPYNAQVRAIQEELKKTYRSYDGFSVKVKSVDGFQGAEEDIIIISTVRSNGAG 964
Query: 810 SIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNL 869
S+GF+S QR NVALTRA+HCLWI+G+ TL+SS SIW ++ D + R CFF+ ++R+L
Sbjct: 965 SVGFLSNLQRANVALTRAKHCLWIVGNGTTLLSSNSIWQKIINDVQNRGCFFDVRDDRDL 1024
Query: 870 AKARLEVSKEL 880
+ ++ + EL
Sbjct: 1025 SNKVMKATIEL 1035
Score = 214 bits (544), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 142/469 (30%), Positives = 229/469 (48%), Gaps = 87/469 (18%)
Query: 23 AVGFAGHTVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGL 82
+G VFSWS+ DIF++ + QV++IP+ F+S Y SF +P +EE L S L
Sbjct: 28 GLGHLERKVFSWSVPDIFNRDLLRHQVKRIPDIFESFASYLNSFAYPFIEEVHADLFSSL 87
Query: 83 EAMRRAPYAQVIA---FEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADF 139
+ A + +VI +E +P +G++V S +E Y+ GDI+V++
Sbjct: 88 DGYVHASFIEVIQVARLDEERPI----FGLDVAEPVKDGERS-REVYEPTRGDIIVMSSQ 142
Query: 140 KPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHD-----KTKKSFF 194
KP+ VSDL R ++ SV +ED++ N V+ + + + K K F
Sbjct: 143 KPKHVSDLTRNQVSYVLGSVLKSHREEDDSLPPNCCIVQLSSAILIDSYHQTKKPKGQLF 202
Query: 195 FIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCS---------------- 238
++L ++ R+W LHM N D++V+ R + C+
Sbjct: 203 AVFLISMETYNRVWKCLHMGPN----------DAIVELRNKKCTDLVNSVWQYKRRELMV 252
Query: 239 -----------VQRKGQWDEKF--------GPSFSST-----------------LNESQV 262
K +W E PSF + LN+SQ+
Sbjct: 253 KGLRVTFLSLTAPYKNKWREYVTMAVEDASAPSFQLSRTFCNGSVDGLGLEKFNLNDSQL 312
Query: 263 GAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITEL 322
A++ C ++ H S ++L+WGPPGTGKTKT+S +L +L +TLAC PTN A+ E+
Sbjct: 313 NAVVDCALAME-NHSSSIKLLWGPPGTGKTKTISTILWAMLIKGRKTLACAPTNTAVLEV 371
Query: 323 ASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPG--FEEIYLNYRIKKLREC 380
A+R++ LV + S++ +C L DI+LFG+K R+K++ G I+L R K+L C
Sbjct: 372 AARIVNLVGKP------SDSSVCFLNDIVLFGSKKRMKIDNGNPLSAIFLESRAKRLLPC 425
Query: 381 FAPLSGWRHCFSSMIDLLEDCVSQYHIYVEK---LKEREDCNVNQSEEK 426
F P +GW HC S+IDLLE+ ++Y +Y+E ++++ N Q +
Sbjct: 426 FMPSTGWIHCLCSLIDLLENSSTKYQLYIEAKGIIQQKRPTNTKQGRSR 474
>gi|356518854|ref|XP_003528092.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent helicase NAM7-like
[Glycine max]
Length = 514
Score = 359 bits (921), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 193/383 (50%), Positives = 251/383 (65%), Gaps = 37/383 (9%)
Query: 522 VRKRYLLQLHQRRSECL-------SVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFF 574
++ YL L Q+ +ECL S L+++ L+ CT+ +++D L
Sbjct: 117 IKDIYLDHLAQQLAECLAPSTGLSSCLKSMIGFLEN----CTSYYHIVKD----EYELGK 168
Query: 575 STASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVES 634
S SYK H++ IKPLN LVIDEAAQLK+ ES P+ L GI+ A+L+GDECQLP+MV
Sbjct: 169 RKISGSYKRHTLSIKPLNILVIDEAAQLKDXESMTPMLLPGISQAILVGDECQLPSMV-- 226
Query: 635 KISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSY 694
EAGFGRSLFERL+SL H K+LLN+QYRMHP I FPN FY NQI D NV+ Y
Sbjct: 227 --CYEAGFGRSLFERLSSLGHPKYLLNMQYRMHPQIRSFPNSFFYFNQIQDAQNVERNDY 284
Query: 695 EKQYLTGTEFGTYSFINIIGGREDF--IYHSCRNIVEVSAVIKILQKLYKA--------- 743
K YL G FG SFINII G+E F S +N+ EV+ ++ IL+ L+K+
Sbjct: 285 GKHYLPGPMFGXLSFINIIRGKEKFEAAGRSYKNMAEVAIIVTILKNLHKSMTVPFGTTD 344
Query: 744 -----WVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYE--NKDGFTVKVKSIDGFQGGEED 796
W+ SK+++SIG++SPY QV AI++ +G Y+ N DGF V VKSIDGFQGGE+D
Sbjct: 345 IFSLPWLTSKERLSIGIMSPYAGQVTAIQENLGKMYDRHNHDGFNVNVKSIDGFQGGEQD 404
Query: 797 IIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKA 856
+II+STVR N S+ FI+ QR NVALTRARHCLWILG+ER L S+E++W A+V DAK+
Sbjct: 405 VIILSTVRTNNRASLEFIASLQRTNVALTRARHCLWILGNERALTSNENVWKAIVLDAKS 464
Query: 857 RQCFFNADEERNLAKARLEVSKE 879
R+CFFN D + + KA L+ KE
Sbjct: 465 RKCFFNVDRDNEMTKAILDAMKE 487
Score = 160 bits (405), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 102/151 (67%), Gaps = 2/151 (1%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTN 316
LNESQ A+ ACL C H S V+L WGPPGTGKTK+++ L LL++K R L C PTN
Sbjct: 11 LNESQNKAISACLSGHKCNHNSVVKLXWGPPGTGKTKSLATLXFALLKMKYRVLVCAPTN 70
Query: 317 VAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKK 376
+AI E+ASRV+ LVKES+ ++ S C +GD+LL GN +RLK+ ++IYL++ ++
Sbjct: 71 IAIKEVASRVVTLVKESHAKE--SGDLFCSMGDLLLSGNNERLKIGEDIKDIYLDHLAQQ 128
Query: 377 LRECFAPLSGWRHCFSSMIDLLEDCVSQYHI 407
L EC AP +G C SMI LE+C S YHI
Sbjct: 129 LAECLAPSTGLSSCLKSMIGFLENCTSYYHI 159
>gi|297603234|ref|NP_001053657.2| Os04g0582000 [Oryza sativa Japonica Group]
gi|38346797|emb|CAD41365.2| OSJNBa0088A01.4 [Oryza sativa Japonica Group]
gi|255675717|dbj|BAF15571.2| Os04g0582000 [Oryza sativa Japonica Group]
Length = 813
Score = 359 bits (921), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 190/366 (51%), Positives = 248/366 (67%), Gaps = 14/366 (3%)
Query: 529 QLHQRRSECLSVLRNLWNSL-----DELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKL 583
++ + R C+ +LR L +L D L+L K + + +R T SSSY L
Sbjct: 420 KIRKARLLCVRILRYLKINLKLPDWDRLSLSDDDRKREIRVYLLQRTKCILCTVSSSYVL 479
Query: 584 HSVE-------IKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKI 636
H+V +KPL LV+DEAAQLKE E+ IP+QL GI AV IGDECQLPA+V+SKI
Sbjct: 480 HNVSMDDRSECLKPLELLVVDEAAQLKECETLIPMQLPGIKQAVFIGDECQLPALVKSKI 539
Query: 637 SDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK 696
SD A FGRS+FERL+SL ++KHLLNIQYRM P IS FP FY +I DG NV SK+Y++
Sbjct: 540 SDNADFGRSVFERLSSLGYNKHLLNIQYRMRPEISKFPVASFYDGKISDGPNVVSKNYKR 599
Query: 697 QYLTGTEFGTYSFINIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIG 754
L G FG YSFIN+ GG E H S +N +EV+AV+ I+++L++ V K+++G
Sbjct: 600 NILPGKMFGPYSFINVDGGHETTEKHGRSLKNTIEVAAVLWIVRRLFEESVFLGSKLTVG 659
Query: 755 VVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFI 814
VVSPY AQV AI++KIG Y+ D F+VKVKS+DGFQG EED+IIISTVR N GS+GF+
Sbjct: 660 VVSPYNAQVRAIQEKIGKTYDMYDDFSVKVKSVDGFQGAEEDVIIISTVRSNRAGSVGFL 719
Query: 815 SKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARL 874
+ QR N+ALTRA+HCLWI+G+ TL +S S+W +V DAK R CFF A E ++L+ A +
Sbjct: 720 TNLQRTNMALTRAKHCLWIVGNGTTLSNSRSVWQKVVNDAKHRGCFFEASEYKHLSNAIV 779
Query: 875 EVSKEL 880
EL
Sbjct: 780 NAVIEL 785
Score = 126 bits (317), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 157/343 (45%), Gaps = 58/343 (16%)
Query: 49 VEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPYAQVIAFEELKPYGTNQYG 108
V++IPE+F S YF SF +PLLEET + + S L+ + V +EL +
Sbjct: 86 VKRIPETFTSSSNYFNSFTYPLLEETHVDVFSSLDGYSHQNFISVARMKEL------LHD 139
Query: 109 IEVDYWRNTISNSG-----KEPYKTLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVP 163
E ++ ++N KE Y GDI+VL KP++VSDL R ++ S+
Sbjct: 140 DETTFFCFEVANPAKDEKSKETYAPCEGDIIVLTSRKPKQVSDLTRNMTSYILGSIVKGG 199
Query: 164 DDEDENKKENRYKVKARNNMQVH-----DKTKKSFFFIYLTNILPNKRIWNSLHMCGNWK 218
+D+D+ +N + + + + V ++ K+ F + L N+ RIW+ LH GN
Sbjct: 200 EDDDD-LPDNCFIARLSSVLPVETDSSTNEPKEPLFAVILINMKTYDRIWDCLHK-GNSH 257
Query: 219 VITQVLGTDSVVDERCELCSVQRKGQWDEKFGPS------FSS-----------TLNESQ 261
++ V S L + DE S F++ LN SQ
Sbjct: 258 IVDTVWRYKSKFQLPIALTVAFATKEVDEAMSSSSQLSQRFAARSAVDLNLEKYMLNNSQ 317
Query: 262 VGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITE 321
+ A+ C+ + S ++LIWGPP TG RTL C PTN A+ E
Sbjct: 318 LNAVADCV-LVSEKISSPIKLIWGPPRTGH----------------RTLTCAPTNTAVLE 360
Query: 322 LASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPG 364
+ASR++KLV ES + L DI+LFGNK R+K+ G
Sbjct: 361 VASRIVKLVHESPASSGQY------LSDIVLFGNKKRMKIGHG 397
>gi|222629425|gb|EEE61557.1| hypothetical protein OsJ_15904 [Oryza sativa Japonica Group]
Length = 822
Score = 358 bits (920), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 190/366 (51%), Positives = 248/366 (67%), Gaps = 14/366 (3%)
Query: 529 QLHQRRSECLSVLRNLWNSL-----DELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKL 583
++ + R C+ +LR L +L D L+L K + + +R T SSSY L
Sbjct: 429 KIRKARLLCVRILRYLKINLKLPDWDRLSLSDDDRKREIRVYLLQRTKCILCTVSSSYVL 488
Query: 584 HSVE-------IKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKI 636
H+V +KPL LV+DEAAQLKE E+ IP+QL GI AV IGDECQLPA+V+SKI
Sbjct: 489 HNVSMDDRSECLKPLELLVVDEAAQLKECETLIPMQLPGIKQAVFIGDECQLPALVKSKI 548
Query: 637 SDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK 696
SD A FGRS+FERL+SL ++KHLLNIQYRM P IS FP FY +I DG NV SK+Y++
Sbjct: 549 SDNADFGRSVFERLSSLGYNKHLLNIQYRMRPEISKFPVASFYDGKISDGPNVVSKNYKR 608
Query: 697 QYLTGTEFGTYSFINIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIG 754
L G FG YSFIN+ GG E H S +N +EV+AV+ I+++L++ V K+++G
Sbjct: 609 NILPGKMFGPYSFINVDGGHETTEKHGRSLKNTIEVAAVLWIVRRLFEESVFLGSKLTVG 668
Query: 755 VVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFI 814
VVSPY AQV AI++KIG Y+ D F+VKVKS+DGFQG EED+IIISTVR N GS+GF+
Sbjct: 669 VVSPYNAQVRAIQEKIGKTYDMYDDFSVKVKSVDGFQGAEEDVIIISTVRSNRAGSVGFL 728
Query: 815 SKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARL 874
+ QR N+ALTRA+HCLWI+G+ TL +S S+W +V DAK R CFF A E ++L+ A +
Sbjct: 729 TNLQRTNMALTRAKHCLWIVGNGTTLSNSRSVWQKVVNDAKHRGCFFEASEYKHLSNAIV 788
Query: 875 EVSKEL 880
EL
Sbjct: 789 NAVIEL 794
Score = 136 bits (343), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 170/353 (48%), Gaps = 56/353 (15%)
Query: 49 VEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPYAQVIAFEELKPYGTNQYG 108
V++IPE+F S YF SF +PLLEET + + S L+ + V +EL +
Sbjct: 86 VKRIPETFTSSSNYFNSFTYPLLEETHVDVFSSLDGYSHQNFISVARMKEL------LHD 139
Query: 109 IEVDYWRNTISNSG-----KEPYKTLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVP 163
E ++ ++N KE Y GDI+VL KP++VSDL R ++ S+
Sbjct: 140 DETTFFCFEVANPAKDEKSKETYAPCEGDIIVLTSRKPKQVSDLTRNMTSYILGSIVKGG 199
Query: 164 DDEDENKKENRYKVKARNNMQVH-----DKTKKSFFFIYLTNILPNKRIWNSLHMCGNWK 218
+D+D+ +N + + + + V ++ K+ F + L N+ RIW+ LH GN
Sbjct: 200 EDDDD-LPDNCFIARLSSVLPVETDSSTNEPKEPLFAVILINMKTYDRIWDCLHK-GNSH 257
Query: 219 VITQVLGTDSV-VDERCELCSVQRKGQWDEKFGPSFSS-------TLNESQVGAMLACLR 270
++ V S VDE ++ Q ++F + LN SQ+ A+ C+
Sbjct: 258 IVDTVWRYKSKEVDE-----AMSSSSQLSQRFAARSAVDLNLEKYMLNNSQLNAVADCV- 311
Query: 271 RLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLV 330
+ S ++LIWGPP TG RTL C PTN A+ E+ASR++KLV
Sbjct: 312 LVSEKISSPIKLIWGPPRTGH----------------RTLTCAPTNTAVLEVASRIVKLV 355
Query: 331 KESYKRDSRSNTPICPLGDILLFGNKDRLKV--NPGFEEIYLNYRIKKLRECF 381
ES + L DI+LFGNK R+K+ + ++L+ R ++L +CF
Sbjct: 356 HESPASSGQY------LSDIVLFGNKKRMKIGEDHDLSVVFLSSRTERLSQCF 402
>gi|302769075|ref|XP_002967957.1| hypothetical protein SELMODRAFT_408911 [Selaginella moellendorffii]
gi|300164695|gb|EFJ31304.1| hypothetical protein SELMODRAFT_408911 [Selaginella moellendorffii]
Length = 2870
Score = 358 bits (919), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 286/922 (31%), Positives = 443/922 (48%), Gaps = 99/922 (10%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
V +WSL++I ++S +QV+KIP F +K Y F LLEETR L+ LE + P
Sbjct: 168 VLAWSLDNINNESLLVNQVDKIPLEFPDLKNYLSVFRPLLLEETRAALQQSLEMINELPC 227
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRV 150
V +E++ + D R K+ K P D+++L +P+ ++ LR
Sbjct: 228 VLVEMGKEVRGRDGD------DKIRRFKMQISKDILK--PKDLVLLTTAEPDCLTILRDS 279
Query: 151 GRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWN- 209
G +T + D + + K + Y + +T + ++ +YL+++ R+W
Sbjct: 280 GEFYTLALIIAGDDMDSDELKVDVYAPIYSSEYDPFLETNRPWYAVYLSSLATGMRVWEA 339
Query: 210 ----SLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAM 265
SL + G + + +VL +S E ++ +G + + LN+SQ+ A+
Sbjct: 340 LKRPSLALAGQYPIFQEVLQANSGEPEIDDV-----EGMTSSEISCARWFKLNDSQMEAV 394
Query: 266 LACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASR 325
+ L + V LI GPPGTGKT + L+ L R L PTN AITE+ R
Sbjct: 395 SRTVIALKREQKPYVRLIQGPPGTGKTSMLIALISVLAGSSKRILMSAPTNAAITEVVVR 454
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKV--NPGFEEIYLNYRIKKLRECFAP 383
+ + + +CP D++L GNK+ L+V N + ++L R ++L A
Sbjct: 455 LFTSITKQPSSFIGCTRTVCP-RDVVLVGNKENLQVDDNEILDAVFLQSREERLATVLAT 513
Query: 384 LSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPFL 443
GW+ S++D LE+ +Y Y K+ +K E ++ FL
Sbjct: 514 ACGWQQKVLSVVDFLENAEERYRQY-----------------KQDKKPDEPAES----FL 552
Query: 444 KYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSK 503
+ RER + + I + C LP +++ D G
Sbjct: 553 DFSRERMTFLGDQMLSSIDLVCNDLPSTFLKST------------DILGA---------- 590
Query: 504 ELEKLFSHSVDEGISWAFVRKR----YLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSK 559
H V E I+ AF R R L + ++L L ++D + P K
Sbjct: 591 ------RHHVTE-INAAFGRFREDSEVLNYVSSTSGAAAALLNLLKTNMDFVTYP--PGK 641
Query: 560 LVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLAGIN 617
+ + + AS+ T SS+ + V+ +F VIDEA QL E+E+ I + L +
Sbjct: 642 IPTGEELLRHASVVCCTVSSA-GMRIVQNTSRHFYTAVIDEAGQLVEAETAIVMGLQNVK 700
Query: 618 HAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQ 677
VL+GD QLPA V SKI+ + +GRSLFERL L H +LN+QYRMHPSIS FPN Q
Sbjct: 701 QLVLVGDHKQLPATVISKIAQDYSYGRSLFERLQLLGHPSIMLNVQYRMHPSISQFPNFQ 760
Query: 678 FYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKIL 737
FY I DG NV Y Q FG Y+F+N+ G HS N VEV V+ +L
Sbjct: 761 FYEGAICDGPNVVDDFY-GQLSQSQLFGPYTFLNVHGVETKDEKHSKSNAVEVLVVMHLL 819
Query: 738 QKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDI 797
+ L++ S +K+ +G++SPY AQV AI ++ + + ++ +S+DGFQG E+D+
Sbjct: 820 KMLHQ----SGEKLEVGIISPYAAQVKAINDRL--KSWDHGSLSINCRSVDGFQGREKDV 873
Query: 798 IIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
II+STVR N GG +GF+ +R+NVA+TRARH L I+GS TL SS+ +W L+ DA+ R
Sbjct: 874 IILSTVRSNVGGYLGFLEDHRRLNVAITRARHVLCIVGSANTLESSDGVWRQLLNDARHR 933
Query: 858 QCFFNADEERNLAKARLEVSKELVEIGA-ESLTST-----SQGGKKEEFEFEFVKAFRSI 911
+C+ A ++ + + + + + EI ESL S K F EF +F SI
Sbjct: 934 KCYREASQDSTVKRT---IQRAMAEIHQLESLVDPRSDFFSNNVWKVFFSKEFKVSFTSI 990
Query: 912 NLIHKVLNSLGRFDELLMLENG 933
+ L+ L + +L L NG
Sbjct: 991 SSGSTKLHVL---NAILNLANG 1009
Score = 62.4 bits (150), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 116/541 (21%), Positives = 221/541 (40%), Gaps = 78/541 (14%)
Query: 889 TSTSQGGKKEEFE--FEFVKAFRSINLIHKVLNSLGRFDELLMLENGSGNFMEAANMAVL 946
TS +K++ + +FV AF I++ L ++L+ +E N+ EA+ +A
Sbjct: 1963 TSAEHYHRKKDVDRMMKFVHAFPGISMKRDFLKRRDYLEQLMQVEFFYMNYEEASQVAEA 2022
Query: 947 EGDIFLATDLLQKAWNFREASKLVLNFVFSNSLWSPGSRGWPLKQFTQKEELLQKAKSLA 1006
+GD+ A L+ A + E ++ ++ + LW+ + GWPL+ + E+L+ +A +A
Sbjct: 2023 KGDLIAAAKFLELAGHRAEGARKIIKHMQLKLLWANNNLGWPLRPL-EDEKLVTEAHRMA 2081
Query: 1007 KNDSNQFYEFVCAEANILSNDHSNLVMMNQQFIDSKRHQNIRGEILSSRMILDFHLHSNA 1066
K D E + + V N + +K I +L + L +
Sbjct: 2082 KGDPRA--EIQLRVLRDDDDLSLSDVFENWKL--AKDDPTINIIVLRQLLEKGLELAKGS 2137
Query: 1067 STYHWEDELVLN--LTTYSDDRICKSQVSIETFVYFWNCWKDKIVKIFEYLGCLRVQQDV 1124
++ VL+ L T SD +++ V WN W KI + + L ++++ +
Sbjct: 2138 TSLGLLTLQVLDRPLRTASD-----MTNTLQFVVAVWNTWFQKISSLLKALA--KIEKII 2190
Query: 1125 DGYRSYEDFCLSYFSVWKHCSNLDTTYLLLKSDAYWVRELSNMYV-QKRGQLVSIDLHQL 1183
+ D CL + V +H +L ++ S W++ + V + QL + +
Sbjct: 2191 PQGDALLDSCLEFMGVTRH--HLPGLCIVEDSMVDWLKRGGDWTVGSGKAQLKT---EKF 2245
Query: 1184 VSAAQSYWSTELLSVGINVLDKLEALHEQSIKNSLSVLCQSKCLSYIYDVAKFLLDSEFL 1243
+S A +W +L S + LE+ H + + S L K I DV L SE
Sbjct: 2246 LSLATDFWRGQLESTSAIFCEVLES-HAGNAGGAESCLSVLK----IMDVVSSLGKSE-- 2298
Query: 1244 YRHWDDVKTLQKFVELSTEDFFRCIFPLDWRESLSKDMISLRQTEVCRSILEEIVSGYVT 1303
H +++L+ V FRC+F +R+ S+ +
Sbjct: 2299 -THERRLRSLRMEV-------FRCLF--------------VRRGNTPVSLRDH------- 2329
Query: 1304 SKSKLSYGQIGRIAVMILGSGKLHNGLYRKVVERCVKDSPWQAFLKCLSQKMESEYLQHP 1363
K G + R + S + + +++E +++ P Q F+ +EY H
Sbjct: 2330 PKVTPHLGALARD--ITAASDSVEETVMLQILEPYLRNGPGQDFIA-------NEYCYHF 2380
Query: 1364 SESNNERELYVIQKLHGALLDTYGANWRKEYDYMSPAYFLYLLERLLI-LISCFQGYIFT 1422
+ ++ Q LH D + + Y++P+ F+Y+LER+L+ I+C +
Sbjct: 2381 AMPMSQ----CAQGLH----DIFSMEGFQH--YITPSMFIYMLERILVSSIACLSHIVEA 2430
Query: 1423 T 1423
T
Sbjct: 2431 T 2431
>gi|302761080|ref|XP_002963962.1| hypothetical protein SELMODRAFT_438696 [Selaginella moellendorffii]
gi|300167691|gb|EFJ34295.1| hypothetical protein SELMODRAFT_438696 [Selaginella moellendorffii]
Length = 2806
Score = 352 bits (902), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 282/921 (30%), Positives = 440/921 (47%), Gaps = 97/921 (10%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
V +WSL++I ++S +QV+KIP F ++K Y F LLEETR L+ LE + P
Sbjct: 168 VLAWSLDNINNESLLVNQVDKIPLEFPALKNYLSVFRPLLLEETRAALQQSLEMINELPC 227
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRV 150
V +E+ + D R K+ K P D+++L +P+ ++ LR
Sbjct: 228 VLVEMGKEVPVRDGD------DKIRRFKMQVSKDILK--PKDLVLLTTAEPDCLTILRDS 279
Query: 151 GRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWNS 210
G +T + D + + K + Y + +T + ++ +YL+++ R+W S
Sbjct: 280 GEFYTLGLIIAGDDMDSDELKVDVYAPIDSSEYDPFLETNRPWYAVYLSSLATGMRVWES 339
Query: 211 LH-----MCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAM 265
L + + + +VL +S E ++ +G + + LN+SQ+ A+
Sbjct: 340 LKRPSLALASQYPIFQEVLQANSGEPEIYDV-----EGMTSSEISCARWFKLNDSQMEAV 394
Query: 266 LACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASR 325
+ L + V LI GPPGTGKT + L+ L R L PTN AITE+ R
Sbjct: 395 SRTVIALKREQKPYVRLIQGPPGTGKTSMLMALISVLAGSSKRILMSAPTNAAITEVVVR 454
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKV--NPGFEEIYLNYRIKKLRECFAP 383
+ + + +CP D++L GNK+ L+V N + ++L R ++L A
Sbjct: 455 LFTSITKQPSPFIGCTRTVCP-RDVVLVGNKENLEVDDNEILDAVFLQSREERLATVLAT 513
Query: 384 LSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPFL 443
GW+ S++D LE+ +Y Y K+ +K E ++ FL
Sbjct: 514 ACGWQQKVLSVVDFLENAEERYRQY-----------------KQDKKPDEPAES----FL 552
Query: 444 KYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSK 503
+ RER + + I + C LP +++ D G
Sbjct: 553 DFSRERMTFLGDQMLSSIDLVCNDLPSTFLKST------------DILGA---------- 590
Query: 504 ELEKLFSHSVDEGISWAFVRKR----YLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSK 559
H V E I+ AF R R L + ++L L ++D + P K
Sbjct: 591 ------RHHVTE-INAAFGRFREDSEVLNYVSSTSGAAAALLNLLKTNMDFVTYP--PGK 641
Query: 560 LVLEDFCFKRASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINH 618
+ + + AS+ T SS+ ++ + VIDEA QL E+E+ I + L +
Sbjct: 642 IPTGEELLRHASVVCCTVSSAGTRIVQNTSRHFYTAVIDEAGQLVEAETAIVMGLQNLKQ 701
Query: 619 AVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQF 678
VL+GD QLPA V SKI+ + +GRSLFERL L H +LN+QYRMHPSIS FPN QF
Sbjct: 702 LVLVGDHKQLPATVISKIAQDYSYGRSLFERLQLLGHPSIMLNVQYRMHPSISQFPNFQF 761
Query: 679 YRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQ 738
Y I DG NV Y Q FG Y+F+N+ G HS N VEV V+ +L+
Sbjct: 762 YEGAICDGPNVVDDFY-GQLSQSQLFGPYTFLNVHGVETKDEKHSKSNAVEVLVVMHLLK 820
Query: 739 KLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDII 798
L++ S +K+ +G++SPY AQV AI ++ + + ++ +S+DGFQG E+D+I
Sbjct: 821 MLHQ----SGEKLQVGIISPYAAQVKAINDRL--KSWDHGSLSINCRSVDGFQGREKDVI 874
Query: 799 IISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQ 858
I+STVR N GG +GF+ +R+NVA+TRARH L I+G+ TL SS+ +W L+ DA+ R+
Sbjct: 875 ILSTVRSNVGGYLGFLEDHRRLNVAITRARHVLCIVGNANTLESSDGVWRQLLNDARHRK 934
Query: 859 CFFNADEERNLAKARLEVSKELVEIGA-ESLTST-----SQGGKKEEFEFEFVKAFRSIN 912
C+ A ++ + + + + + EI ESL S K F EF +F SI+
Sbjct: 935 CYREASQDSTVKRT---IQRAMAEIHQLESLVDPRSDFFSNNVWKVFFSKEFKASFTSIS 991
Query: 913 LIHKVLNSLGRFDELLMLENG 933
L+ L + +L L NG
Sbjct: 992 SGSTKLHVL---NAILNLANG 1009
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 114/528 (21%), Positives = 210/528 (39%), Gaps = 77/528 (14%)
Query: 889 TSTSQGGKKEEFE--FEFVKAFRSINLIHKVLNSLGRFDELLMLENGSGNFMEAANMAVL 946
TS +K++ + +FV AF I++ L ++L+ +E N+ EA+ +A
Sbjct: 1900 TSAEHYHRKKDVDRMMKFVHAFPGISMKRDFLKRRDYLEQLMQVEFFYMNYEEASQVAEA 1959
Query: 947 EGDIFLATDLLQKAWNFREASKLVLNFVFSNSLWSPGSRGWPLKQFTQKEELLQKAKSLA 1006
+GD+ A L+ A + E ++ ++ + LW+ + GWPL+ + E+L+ +A +A
Sbjct: 1960 KGDLIAAAKFLELAGHRAEGARKIIKHMQLKLLWANNNLGWPLRPL-EDEKLVTEAHRMA 2018
Query: 1007 KNDSNQFYEFVCAEANILSNDHSNLVMMNQQFIDSKRHQNIRGEILSSRMILDFHLHSNA 1066
K D E + + V N + +K I +L + L +
Sbjct: 2019 KGDPRA--EIQLRVLRDDDDLSLSDVFENWKL--AKDDPTINIIVLRQLLEKGLELAKGS 2074
Query: 1067 STYHWEDELVLN--LTTYSDDRICKSQVSIETFVYFWNCWKDKIVKIFEYLGCLRVQQDV 1124
++ VL+ L T SD +++ V WN W KI + + L ++++ +
Sbjct: 2075 TSLGLLTLQVLDRPLRTASD-----MTNTLQFVVAVWNTWFQKISSLLKALA--KIEKII 2127
Query: 1125 DGYRSYEDFCLSYFSVWKHCSNLDTTYLLLKSDAYWVRELSNMYV-QKRGQLVSIDLHQL 1183
+ D CL + V +H +L ++ S W++ + V + QL + +
Sbjct: 2128 PQGDALLDSCLEFMGVTRH--HLPGLCIVEDSMVDWLKRGGDWTVGSGKAQLKT---EKF 2182
Query: 1184 VSAAQSYWSTELLSVGINVLDKLEALHEQSIKNSLSVLCQSKCLSYIYDVAKFLLDSEFL 1243
+S A +W +L S + LE+ H + + S L K I DV L SE
Sbjct: 2183 LSLATDFWRGQLESTSAIFCEVLES-HAGNAGGAESCLSVLK----IMDVVSSLGKSE-- 2235
Query: 1244 YRHWDDVKTLQKFVELSTEDFFRCIFPLDWRESLSKDMISLRQTEVCRSILEEIVSGYVT 1303
H +++L+ + FRC+F +SLR L+ +
Sbjct: 2236 -THERRLRSLRM-------ELFRCLFV-----RRGNTPVSLRDHPKVTPHLDALARDITA 2282
Query: 1304 SKSKLSYGQIGRIAVMILGSGKLHNGLYRKVVERCVKDSPWQAFLKCLSQKMESEYLQHP 1363
+ + + + ILG L NG P Q F+ +EY H
Sbjct: 2283 ASDSVEET----VMLQILGP-YLRNG-------------PGQDFIA-------NEYCYHF 2317
Query: 1364 SESNNERELYVIQKLHGALLDTYGANWRKEYDYMSPAYFLYLLERLLI 1411
+ I + L D + + Y++P+ F+Y+LER+L+
Sbjct: 2318 A--------MPISQCAQGLHDIFSMEGFQH--YITPSMFIYMLERILV 2355
>gi|50251911|dbj|BAD27849.1| tRNA-splicing endonuclease positive effector-like [Oryza sativa
Japonica Group]
gi|50251934|dbj|BAD27870.1| tRNA-splicing endonuclease positive effector-like [Oryza sativa
Japonica Group]
Length = 372
Score = 348 bits (894), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 187/367 (50%), Positives = 243/367 (66%), Gaps = 14/367 (3%)
Query: 487 LLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAF------VRKRYLLQLHQRRSECLSV 540
+L FG L+ + + L+ LF S D IS F V+ +L R++CL
Sbjct: 7 MLKFFGKLV--EPKSEQSLKTLFKLSPDGSISSLFQNFVTYVQDSVSTELKDARAQCLQK 64
Query: 541 LRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSV-EIKPLNFLVIDEA 599
L++L D LP K +EDF + A TASSS +LH + E P + LV+DEA
Sbjct: 65 LKHLS---DHFELPNVFDKRSIEDFLVRNAKSILCTASSSSRLHYLPEASPFDLLVVDEA 121
Query: 600 AQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHL 659
AQLKE ES IPLQL G+ HAVLIG E QLPA+V+S++ ++A FGRSLFERL+SL H KHL
Sbjct: 122 AQLKECESLIPLQLPGVRHAVLIGYEFQLPALVKSRVCEDAEFGRSLFERLSSLGHPKHL 181
Query: 660 LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDF 719
L++QYRMHP IS FP FY N+I DG NV + YE++ L G +G+YSFIN+ G+E
Sbjct: 182 LDVQYRMHPGISKFPVSSFYENKISDGENVLHRDYERKPLAGPMYGSYSFINVDAGKESK 241
Query: 720 IYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENK 777
H S N +EV+AV +I+Q+L+K V + +K+ +GVVSPY QV AI++++G YE
Sbjct: 242 GKHDKSLMNPIEVAAVTRIVQRLFKESVDTGRKLCVGVVSPYKGQVRAIQERLGKAYETH 301
Query: 778 DGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSE 837
GFTVKV+S+DGFQG EEDIII S VR NT GS+GF+S R NVALTRA+HCLWILG+
Sbjct: 302 GGFTVKVRSVDGFQGAEEDIIIFSAVRSNTTGSVGFLSNVNRTNVALTRAKHCLWILGNA 361
Query: 838 RTLISSE 844
TL SS+
Sbjct: 362 NTLASSK 368
>gi|10178000|dbj|BAB11373.1| unnamed protein product [Arabidopsis thaliana]
Length = 834
Score = 347 bits (891), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 168/315 (53%), Positives = 226/315 (71%), Gaps = 4/315 (1%)
Query: 562 LEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVL 621
+ FC + A + F TASS ++ I ++ LV+DE AQLKE ES LQL G+ HA+L
Sbjct: 494 IRKFCLQNADIIFCTASSVANINPARIGSVDLLVVDETAQLKECESVAALQLPGLCHALL 553
Query: 622 IGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRN 681
IGDE QLPAMV ++ D+A FGRSLFERL + HSKHLLN+QYRMHPSIS FPN +FY
Sbjct: 554 IGDEYQLPAMVHNEECDKAKFGRSLFERLVLIGHSKHLLNVQYRMHPSISRFPNKEFYGG 613
Query: 682 QILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDF-IYHSCRNIVEVSAVIKILQKL 740
+I D ANV+ YEK++L G FGT+SFIN+ G+E+F HS +N+VEV+ + KI+ L
Sbjct: 614 RITDAANVQESIYEKRFLQGNMFGTFSFINVGRGKEEFGDGHSPKNMVEVAVISKIISNL 673
Query: 741 YKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYEN---KDGFTVKVKSIDGFQGGEEDI 797
+K KQK+S+GV+SPY QV AI++++G +Y + FT+ V+S+DGFQGGE D+
Sbjct: 674 FKVSSQRKQKMSVGVISPYKGQVRAIQERVGDKYNSLSVDQLFTLNVQSVDGFQGGEVDV 733
Query: 798 IIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
IIISTVRCN G++GF+S QR NVALTRARHCLW++G+ TL S SIW L+ +++ R
Sbjct: 734 IIISTVRCNVNGNVGFLSNRQRANVALTRARHCLWVIGNGTTLALSGSIWAELISESRTR 793
Query: 858 QCFFNADEERNLAKA 872
CF++A +++NL A
Sbjct: 794 GCFYDAVDDKNLRDA 808
Score = 186 bits (471), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/419 (30%), Positives = 211/419 (50%), Gaps = 56/419 (13%)
Query: 33 SWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPYAQ 92
SWSL+DI ++ K+++ IP+ F SV +Y FV LLEETR +L S ++ ++P ++
Sbjct: 24 SWSLKDILNEDLSKEKIMTIPDRFSSVDEYSQCFVPHLLEETRTELFSSFRSLSKSPVSR 83
Query: 93 VIAFEELKPYGTNQYGIEVDYWRNTI-----SNSGKEPYKTLPGDILVLADF-----KPE 142
+++ E + + I+ W + I ++ E Y+ GDI+ L+ +P
Sbjct: 84 ILSVETKVIEYSGRSSIK---WFHDIKLMDYADDKNEIYEPKCGDIIALSPLSLTEERP- 139
Query: 143 KVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFF-IYLTNI 201
++ DL + + F +V D K+ + + K +F ++L NI
Sbjct: 140 RIDDLDPLLLGYVF----SVYGDS---------KISVHFSRSISQSEKHTFCTGVFLINI 186
Query: 202 LPNKRIWNSLHM-CGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSF-SSTLNE 259
N RIWN+LH + +I VL D+ E+C C G ++ S+ LN
Sbjct: 187 TTNTRIWNALHKDAADSTLIQSVLQEDASATEQCFSCENDVDGSDSDRVVDIIRSAKLNS 246
Query: 260 SQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAI 319
SQ A+L L+ +C H+ V+LIWGPPGTGKTKTV+ LL TL+++KC+T+ C PTN I
Sbjct: 247 SQEAAILGFLKTRNCKHKESVKLIWGPPGTGKTKTVATLLSTLMQLKCKTVVCAPTNTTI 306
Query: 320 TELASRVLKLVKESYKRDSRSNTPICP-----------------------LGDILLFGNK 356
+ASR+L L KE+ + +N+ I +G+I+L GN+
Sbjct: 307 VAVASRLLSLSKETIVC-APTNSAIAEVVSRFEFSTLFYGTSILERTTYGMGNIVLSGNR 365
Query: 357 DRLKV--NPGFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLK 413
+R+ + N ++ N R+ KL F GW+ S+ID LE+ ++Y +V +L+
Sbjct: 366 ERMGITSNKVLLNVFFNDRVSKLGRLFLSTCGWKKRLESIIDFLENTETKYEQHVNELE 424
>gi|115460118|ref|NP_001053659.1| Os04g0582600 [Oryza sativa Japonica Group]
gi|113565230|dbj|BAF15573.1| Os04g0582600, partial [Oryza sativa Japonica Group]
Length = 717
Score = 332 bits (852), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 228/643 (35%), Positives = 343/643 (53%), Gaps = 97/643 (15%)
Query: 190 KKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDS--------------VVDERCE 235
K + F ++L N+ RIW L + N + + S V D +
Sbjct: 36 KGAIFAVFLINMKTYNRIWKCLRLGANDGNLANLQNKSSTNMVNLVRQYKPKVVEDNSSQ 95
Query: 236 LCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTV 295
+ + G D F LN SQ+ A+ C+ ++ S ++LIWGPPGTGKTKT+
Sbjct: 96 VSQCLKHGSMD--FLGLEKLNLNASQLNAVADCVSVME-NQLSSLKLIWGPPGTGKTKTI 152
Query: 296 SMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGN 355
S +L +L +TL C PTN +I E+ASR+++LV+ S+ C L DI+LFGN
Sbjct: 153 STILWAMLIKGRKTLTCAPTNTSILEVASRIVRLVRGC------SDGSACFLSDIVLFGN 206
Query: 356 KDRLKVNPGFE--EIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEK-L 412
K R+K++ G E I+L+ R ++L CF P +GWRHC S+IDLLE+ V++Y Y+E L
Sbjct: 207 KKRMKIDDGHELSVIFLDSRAERLLPCFVPNTGWRHCLCSLIDLLENSVTKYKYYIEDVL 266
Query: 413 KEREDC-----------NV-------NQSEEKECRKETEGSKGERK-PFLKYVRERFKCA 453
++R+D NV N S EK+C + + + R PF Y+++ +
Sbjct: 267 EKRKDIEKETAEKDQGENVPWRMQFGNGSCEKKCGRPEDKEEASRLLPFKYYLKDGYNNL 326
Query: 454 VVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLL--FQDN--VVSKELEKLF 509
+L CI I + P++ +E SFQ M+ + L+ ++ ++ N + S EL +
Sbjct: 327 SQNLSYCIEILYNNHPRNSGTERSFQCMLEVLELIKILHGMINCYKGNADIWSDELLETM 386
Query: 510 SHSVDEGISWA----FVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDF 565
+ + W+ V+ ++ R + L V + L + L LP S ++ +
Sbjct: 387 IEEDSDPVLWSEQLVSVQTSTCIKSKFRLARLLCV-QELKYLVKNLELPNYYSIQPIKLY 445
Query: 566 CFKRASLFFSTASSSYKLHSV--EIKP---------------LNFLVIDEAAQLKESEST 608
+R T SSS++L++V ++ P L L++DEAAQLKE E+
Sbjct: 446 LLQRTKCILCTVSSSFRLYNVPMDVSPSGICGPFKQPEKANLLEMLIVDEAAQLKECETL 505
Query: 609 IPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHP 668
IPLQL GI AVLIGDE QLPA+V+SKI+D A FGRS+FERL+ L +SKHLLN+QYRMHP
Sbjct: 506 IPLQLPGITQAVLIGDEYQLPALVKSKIADNAFFGRSVFERLSLLGYSKHLLNVQYRMHP 565
Query: 669 SISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIV 728
IS FP FY +I DG+NV ++ GR S +N +
Sbjct: 566 EISRFPVATFYDGKISDGSNVTTEK--------------------NGR------SLKNTI 599
Query: 729 EVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
EV+ V++I+Q+L+K V ++ K+S+GVVSPY AQV AI++K+G
Sbjct: 600 EVATVLRIVQRLFKEAVSTQSKLSVGVVSPYNAQVRAIQEKVG 642
>gi|224099655|ref|XP_002311567.1| predicted protein [Populus trichocarpa]
gi|222851387|gb|EEE88934.1| predicted protein [Populus trichocarpa]
Length = 630
Score = 330 bits (846), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 198/444 (44%), Positives = 276/444 (62%), Gaps = 46/444 (10%)
Query: 1241 EFLYRHWDDVKTLQKFVELSTEDFFRCIFPLDWRESLSKDMISLRQTEVCRSILEEIVSG 1300
EFL D+K L+KF L+T F+ CI+P DWRESL ++MISLR+TE+CR++L+E++
Sbjct: 24 EFLSIQHGDIKALRKFTRLATGCFYDCIYPRDWRESLKENMISLRRTEICRNLLKEVIFE 83
Query: 1301 YVTSKSKLSYGQIGRI--AVMILGSGKLHNGLYRKVVERCVKDSPWQAFLKCLSQKMESE 1358
V+SK+ LSY Q+GR+ VMILGSG++ Y K+ + +S W+AF++ L +
Sbjct: 84 DVSSKNNLSYAQLGRMRSIVMILGSGEMLCEPYEKMADGLQWNSSWKAFIEDLCR----- 138
Query: 1359 YLQHPSESNNERELYVIQKLHGALLDTYGANWRKEYDYMSPAYFLYLLERLLILISCFQG 1418
N E+ + KLH AL+DTY ANWRK DY+ P FLY+LER LIL+S FQG
Sbjct: 139 ---------NVSEVSYMWKLHEALVDTYYANWRKG-DYILPGCFLYMLERQLILLSYFQG 188
Query: 1419 YIFTTKSSFVDWRIYQEPHTNPT-ASFVTDVWQSFGDVLDSIFFIVQHFLYNEKEMIEWI 1477
Y FTTKSSFV+W IYQE H +P S+ QS +L + VQ LYNEK+M+EWI
Sbjct: 189 YCFTTKSSFVEWLIYQEGHGSPAFESWTGLAPQSTESILKFVVETVQLLLYNEKDMMEWI 248
Query: 1478 SKSHKNV---NNYHSLVVLRLVVIICLLHLNFGKFGSSLRDLLGRKYVSRLLPLEFCDAL 1534
S KNV N+YH++VVLRLVVIICL+++NFG L DLLGR Y+++ LP +F DA+
Sbjct: 249 RVSEKNVKVLNDYHAVVVLRLVVIICLIYVNFGWCEGLLSDLLGRTYITKKLPSQFYDAI 308
Query: 1535 RKIENHNCLNVHE--ISQAFKKIGNPLVIASLGKNCSQFLCPDAIFVNMKVMKSTDEIFG 1592
RK + HN LNV+ +++AF KIGNPLV+ S GKNCS FLCPDAIFV+MKV +S D +
Sbjct: 309 RKRQKHNSLNVNPTVVAEAFSKIGNPLVVVSFGKNCSGFLCPDAIFVDMKVNESKDNVLR 368
Query: 1593 ILYPKMEACQV-----------------------QVGTSKDVPSKRPASLPEDTDAQNMN 1629
+L+ K +A +G ++PS + ++ +
Sbjct: 369 VLFAKTDATAQDHTGAVEANTRSSFKGIVSQGIEDLGKIPELPSNVGDTANWNSSCGKKD 428
Query: 1630 DNTLVMNLDQLCKVFEALKMVDNG 1653
+ + ++L ++FEALK ++G
Sbjct: 429 EGNPPLRHERLWEIFEALKSPNHG 452
>gi|410129750|dbj|BAM64829.1| hypothetical protein [Beta vulgaris]
Length = 1041
Score = 326 bits (835), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 166/295 (56%), Positives = 218/295 (73%), Gaps = 5/295 (1%)
Query: 583 LHSVEIKP-LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKI-SDEA 640
L S+++K + +VIDEAAQLKE ES I LQ+ G+ A+LIGD+ QLPAMV+S++ +
Sbjct: 536 LSSIKMKSCVEMVVIDEAAQLKECESAISLQIPGVKTAILIGDDRQLPAMVQSEVLKKKI 595
Query: 641 GFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLT 700
FGRSLFER+ L KHLLNIQYRMHPSIS FPN QFY N+I+D NVK SY K +L
Sbjct: 596 NFGRSLFERMVRLGKKKHLLNIQYRMHPSISSFPNRQFYENKIVDAPNVKEISYVKNFLD 655
Query: 701 GTEFGTYSFINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKA-WVGSKQKVSIGVVSP 758
+GTYSFIN+ GG+EDF HS RN+ E V +I+ KL+K + +KQKVS+GV+SP
Sbjct: 656 KGMYGTYSFINVSGGKEDFKKGHSPRNLEEADVVDRIIAKLFKDFYCITKQKVSVGVISP 715
Query: 759 YTAQVVAIRKKIGFEY-ENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKP 817
Y QV +++K+ +Y ++K+ F + ++S+DGFQGGEEDIIIISTVRCN GS+GF+S
Sbjct: 716 YKGQVGLLQEKLEKKYTKHKENFCINIRSVDGFQGGEEDIIIISTVRCNGNGSVGFLSNC 775
Query: 818 QRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKA 872
QR NVALTRAR+CLWI+GS TL +S S+W +LV DAK R CF++ ++ +L KA
Sbjct: 776 QRTNVALTRARYCLWIVGSGSTLGNSTSVWNSLVFDAKTRGCFYDVKDDIDLIKA 830
Score = 226 bits (575), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 175/557 (31%), Positives = 263/557 (47%), Gaps = 98/557 (17%)
Query: 14 KGCSSSSKKAVGFAGHTVFSWSLEDIFSQSFFKD-------QVEKIPESFQSVKQYFGSF 66
K CS+ K+ VF+W ++D+ +Q+ + + QV +I E+F S Y SF
Sbjct: 2 KKCSTGKKERHQGLLELVFTWPIKDVINQNLYINKSHTSDKQVNEISETFTSTADYLNSF 61
Query: 67 VFPLLEETRMQLRSGLEAMRRAPYAQVIAF---EELKPYGTNQYGIEVDYWRNTISNSGK 123
PL+EETR SGLE++ AP ++ + +P Y I + N+
Sbjct: 62 KVPLIEETRADFCSGLESVGHAPACEISGIWLSKNYRPPKNLYYEISTKKISSDDVNNHG 121
Query: 124 EPYKTLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKE-------NRYK 176
Y+ GDI L + +P ++DL + + F V+ +E+E K E +R
Sbjct: 122 LHYEPESGDIFALTNLRPRSIADLIKPDKPLHFAYVSR-SSEENEVKMEILSSEKIDREL 180
Query: 177 VKARNNMQVHDKTKKSFFFIYLTNILPNKRIWNSLH---MCGNWKVITQVLGTDSVVDER 233
+KA+N F YL NI N RIW +L+ N +I +VL +S+VD+
Sbjct: 181 IKAKNG---------RIFITYLMNITTNMRIWKALNPDPKSKNLGLIQKVLQYNSLVDDE 231
Query: 234 C------ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRS-GVELIWGP 286
C E C+V R + F S L+ESQ A+L+ + C H+ V+LIWGP
Sbjct: 232 CVNCNSEESCNVMRSS---DMFNCLGSFGLDESQKEAILSSISLRKCLHQEYKVKLIWGP 288
Query: 287 PGTGKTKTVSMLLLTLLRIKC-RTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPIC 345
PGTGKTKTV+ LL +L+ +C RTL C PTNVA+ ++A R++ L ES +
Sbjct: 289 PGTGKTKTVASLLFVILKQRCCRTLTCAPTNVAVIQVAKRLVTLYLESLTYHTYG----- 343
Query: 346 PLGDILLFGNKDRLKVNPGFE--EIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVS 403
LGDI+LFGN+ R+K++ +E +++L YR++ L EC PL+GWR SM+ LL D +
Sbjct: 344 -LGDIVLFGNEKRMKIDDHYELVDVFLKYRVEILEECLKPLTGWRASLDSMMYLLSDPQA 402
Query: 404 QYHIYVEKLKE--------------------------------REDCNVNQSE-EKECRK 430
+Y+ Y+ KE +E N + SE +KE RK
Sbjct: 403 RYNAYIAGDKETKIDKKAENGANVVATNVVKVDKERTTTTKKWKEIINKSMSENKKENRK 462
Query: 431 ----------------ETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYIS 474
+ EG+K E F + R +F L C THLP S +
Sbjct: 463 KGKGKEQDGKTGDNEGDNEGTKMEVMTFEDFQRNKFCSVADRLVFCAENLYTHLPTSCLP 522
Query: 475 ENSFQEMVALKSLLDSF 491
+ ++M+ L LL S
Sbjct: 523 LDVAKQMIRLVVLLSSI 539
>gi|15239483|ref|NP_198519.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
gi|332006756|gb|AED94139.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
Length = 638
Score = 322 bits (826), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 166/313 (53%), Positives = 217/313 (69%), Gaps = 12/313 (3%)
Query: 572 LFFSTASSSYKLHSV-------EIKPLNF--LVIDEAAQLKESESTIPLQLAGINHAVLI 622
LF ST L S+ E K N LV+DEAAQLKE ES LQL G+ HA+LI
Sbjct: 320 LFLSTCGWKQSLESIIDLLENTETKTGNIEVLVVDEAAQLKECESVAALQLPGLRHAILI 379
Query: 623 GDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQ 682
GDE QLPAMV + ++A FGRSLFERL L H KHLL++QYRMHPSIS FP +FY +
Sbjct: 380 GDEFQLPAMVHNDQCEKAKFGRSLFERLVLLGHKKHLLDVQYRMHPSISRFPYKEFYGGR 439
Query: 683 ILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDF-IYHSCRNIVEVSAVIKILQKLY 741
I D ANV+ Y+K++L G FG++SFIN+ G+E+F S +N+VEV+ V +I+ L+
Sbjct: 440 IKDAANVQESIYQKRFLQGNMFGSFSFINVGRGKEEFGDGDSPKNMVEVAVVSEIISNLF 499
Query: 742 KAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDG--FTVKVKSIDGFQGGEEDIII 799
K K K+S+GV++PY QV AI+++I +Y + G FTV V+S+DGFQGGEEDIII
Sbjct: 500 KVSRERKMKMSVGVITPYKGQVRAIQERIRDKYSSLSGELFTVNVRSVDGFQGGEEDIII 559
Query: 800 ISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQC 859
ISTVR N+ G +GF+S QR NVALTRARHCLW++G+E TL S SIW L+ D+K R+C
Sbjct: 560 ISTVRSNSNGKVGFLSNRQRANVALTRARHCLWVIGNESTLARSGSIWANLISDSKRRKC 619
Query: 860 FFNADEERNLAKA 872
F++A +++ L A
Sbjct: 620 FYDAKDDKRLRDA 632
Score = 157 bits (397), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/380 (31%), Positives = 190/380 (50%), Gaps = 62/380 (16%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
+FSWS+EDI ++ +K +++ IP+ F SV +Y FV LLEETR +L + +++ +A
Sbjct: 13 IFSWSMEDILNKDLYKQKIKTIPDKFSSVNEYLKCFVPHLLEETRTELSTSFKSLSKAHL 72
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTISN--SGKEPYKTLPGDILVLADFKPEKVSDLR 148
++ + E + + ++ ++ +I++ S +E Y+ GD++ L +P V DL
Sbjct: 73 FEISSLETMTKESSGSLSNKL-FYDMSINDALSIREKYQPKCGDLIALTKERPRGVDDLN 131
Query: 149 RVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIW 208
+ +SV T P N + +R + HD+ K
Sbjct: 132 PL--LLGSISVDTYP---------NISVILSR--LIFHDEKK------------------ 160
Query: 209 NSLHMCGNWKVITQVL-----GTDSVVDERCELCSVQRKGQWDEKFGPSF-SSTLNESQV 262
SL N+ +I VL G + +V R W + SS LN SQ
Sbjct: 161 -SLGFAPNFDLIQSVLQPNTAGMEPIVSSRT----------WGQNVLDIIRSSKLNSSQE 209
Query: 263 GAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITEL 322
A+L+CL D H++ V+LIWGP KTKTV+ LLL LL+++C+T+ C PTN AI E+
Sbjct: 210 AAILSCLETRDSNHKNSVKLIWGPL---KTKTVATLLLVLLKLRCKTVVCAPTNTAIVEV 266
Query: 323 ASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPG--FEEIYLNYRIKKLREC 380
SR+L L + S LG+I L GN+ R+++ ++L++RI KLR+
Sbjct: 267 TSRLLAL------SNKYSEHATYGLGNIFLAGNQKRMRIKDTDYLRNVFLDHRISKLRKL 320
Query: 381 FAPLSGWRHCFSSMIDLLED 400
F GW+ S+IDLLE+
Sbjct: 321 FLSTCGWKQSLESIIDLLEN 340
>gi|9758526|dbj|BAB08973.1| unnamed protein product [Arabidopsis thaliana]
Length = 536
Score = 322 bits (824), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 157/285 (55%), Positives = 208/285 (72%), Gaps = 3/285 (1%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
+ LV+DEAAQLKE ES LQL G+ HA+LIGDE QLPAMV + ++A FGRSLFERL
Sbjct: 246 IEVLVVDEAAQLKECESVAALQLPGLRHAILIGDEFQLPAMVHNDQCEKAKFGRSLFERL 305
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFI 710
L H KHLL++QYRMHPSIS FP +FY +I D ANV+ Y+K++L G FG++SFI
Sbjct: 306 VLLGHKKHLLDVQYRMHPSISRFPYKEFYGGRIKDAANVQESIYQKRFLQGNMFGSFSFI 365
Query: 711 NIIGGREDF-IYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKK 769
N+ G+E+F S +N+VEV+ V +I+ L+K K K+S+GV++PY QV AI+++
Sbjct: 366 NVGRGKEEFGDGDSPKNMVEVAVVSEIISNLFKVSRERKMKMSVGVITPYKGQVRAIQER 425
Query: 770 IGFEYENKDG--FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
I +Y + G FTV V+S+DGFQGGEEDIIIISTVR N+ G +GF+S QR NVALTRA
Sbjct: 426 IRDKYSSLSGELFTVNVRSVDGFQGGEEDIIIISTVRSNSNGKVGFLSNRQRANVALTRA 485
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKA 872
RHCLW++G+E TL S SIW L+ D+K R+CF++A +++ L A
Sbjct: 486 RHCLWVIGNESTLARSGSIWANLISDSKRRKCFYDAKDDKRLRDA 530
Score = 74.7 bits (182), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 66/111 (59%), Gaps = 9/111 (8%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTL 310
P LN + A+L+CL D H++ V+LIWGP KTKTV+ LLL LL+++C+T+
Sbjct: 124 PRGVDDLNPLLLAAILSCLETRDSNHKNSVKLIWGPL---KTKTVATLLLVLLKLRCKTV 180
Query: 311 ACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKV 361
C PTN AI E+ SR+L L + S LG+I L GN+ R+++
Sbjct: 181 VCAPTNTAIVEVTSRLLAL------SNKYSEHATYGLGNIFLAGNQKRMRI 225
Score = 70.1 bits (170), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 69/119 (57%), Gaps = 3/119 (2%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
+FSWS+EDI ++ +K +++ IP+ F SV +Y FV LLEETR +L + +++ +A
Sbjct: 13 IFSWSMEDILNKDLYKQKIKTIPDKFSSVNEYLKCFVPHLLEETRTELSTSFKSLSKAHL 72
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTISN--SGKEPYKTLPGDILVLADFKPEKVSDL 147
++ + E + + ++ ++ +I++ S +E Y+ GD++ L +P V DL
Sbjct: 73 FEISSLETMTKESSGSLSNKL-FYDMSINDALSIREKYQPKCGDLIALTKERPRGVDDL 130
>gi|218191369|gb|EEC73796.1| hypothetical protein OsI_08493 [Oryza sativa Indica Group]
Length = 352
Score = 319 bits (818), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 174/351 (49%), Positives = 229/351 (65%), Gaps = 14/351 (3%)
Query: 487 LLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAF------VRKRYLLQLHQRRSECLSV 540
+L FG L+ + + L+ LF S D IS F V+ +L R++CL
Sbjct: 7 MLKFFGKLV--EPKSEQSLKTLFKLSPDGSISSLFQNFVTYVQDSVSTELKDARAQCLQK 64
Query: 541 LRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSV-EIKPLNFLVIDEA 599
L+++ D LP K +EDF + A TASSS +LH + E P + LV+DEA
Sbjct: 65 LKHIS---DHFELPNVFDKRSIEDFLVRNAKSILCTASSSSRLHYLPEASPFDLLVVDEA 121
Query: 600 AQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHL 659
AQLKE ES IPLQL G+ HAVLIG E QLPA+V+S++ ++A FGRSLFERL+SL H KHL
Sbjct: 122 AQLKECESLIPLQLPGVRHAVLIGYEFQLPALVKSRVCEDAEFGRSLFERLSSLGHPKHL 181
Query: 660 LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDF 719
L++QYRMHP IS FP FY N+I D NV + YE++ L G +G+YSFIN+ G+E
Sbjct: 182 LDVQYRMHPGISKFPVSSFYENKISDCENVLHRDYERKPLAGPMYGSYSFINVDAGKESK 241
Query: 720 IYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENK 777
H S N +EV+AV +I+Q+L+K V + +K+ +GVVSPY QV AI++++G YE
Sbjct: 242 GKHDKSLMNPIEVAAVTRIVQRLFKESVDTGRKLCVGVVSPYKGQVRAIQERLGKAYETH 301
Query: 778 DGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
GFTVKV+S+DGFQG EEDIII S VR NT GS+GF+S R NVALTRA+
Sbjct: 302 GGFTVKVRSVDGFQGAEEDIIIFSAVRSNTTGSVGFLSNVNRTNVALTRAK 352
>gi|255564992|ref|XP_002523489.1| conserved hypothetical protein [Ricinus communis]
gi|223537317|gb|EEF38948.1| conserved hypothetical protein [Ricinus communis]
Length = 675
Score = 315 bits (807), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 170/316 (53%), Positives = 216/316 (68%), Gaps = 13/316 (4%)
Query: 564 DFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIG 623
D C + ASL F TASSS L S +PLN L+IDEA QL+E ES IPLQL G HAVLIG
Sbjct: 331 DSCLRTASLVFCTASSSSMLLSGL-EPLNLLIIDEATQLRECESFIPLQLQGFKHAVLIG 389
Query: 624 DECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQI 683
D CQL A V S +S AGFGRSLFERLTS SKH LN QYR HP IS FPN +FY NQI
Sbjct: 390 DNCQLAATVTSNVSARAGFGRSLFERLTSFGCSKHTLNKQYRTHPLISSFPNFKFYANQI 449
Query: 684 LDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSC--RNIVEVSAVIKILQKLY 741
D V++KS+ K +L FG YSFINI G E+ C +N+ E++ ++KI+Q L+
Sbjct: 450 WDAPYVRNKSFLKCFLPDPVFGPYSFINISCGNEELDSLRCSFKNMAELATMMKIVQILF 509
Query: 742 KAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIIS 801
K W SKQK+S+G++S YTAQ VAI +K+G YEN +GF++KV +I GFQGGEED+II+S
Sbjct: 510 KEWSKSKQKLSVGIISFYTAQFVAINEKVGRRYENLEGFSLKVDTIGGFQGGEEDVIILS 569
Query: 802 TVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFF 861
TVR + GS FIS QR+NVALTRA RTL S ++W +++ +AK +CF+
Sbjct: 570 TVRTSADGSSEFISNLQRINVALTRA----------RTLADSSTVWKSIIQEAKDCKCFY 619
Query: 862 NADEERNLAKARLEVS 877
NA+E++ L L+ +
Sbjct: 620 NAEEDKELVDVVLQTA 635
Score = 277 bits (708), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 156/356 (43%), Positives = 203/356 (57%), Gaps = 40/356 (11%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
++SWS ++I Q FKD+VEKIP++FQ V++Y GSFV+PLLEETR +L S L+ + RA Y
Sbjct: 22 IYSWSFDEILDQELFKDKVEKIPDTFQQVEEYSGSFVYPLLEETRAELASSLDNISRARY 81
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRV 150
AQV+ K GT+ Y I+VDYWRN + K+ Y+TLPGDILV KPE +SDLR
Sbjct: 82 AQVLGTS--KQGGTSLYDIKVDYWRNRLGIHRKDYYQTLPGDILVFTKAKPETISDLRWH 139
Query: 151 GRTWTFVSVTTVPDDEDENKKENRYKVKA-RNNMQVHDKTKKSFFFIYLTNILPNKRIWN 209
GR W + +D+N +VK R + V K F ++L N+ ++RIW
Sbjct: 140 GRAWA-AKLKESDGYDDDNANATCLRVKGFRGDDHVSFSLGKKLFVVFLMNVRTHERIWK 198
Query: 210 SLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACL 269
SL GN VI Q+L + S LNESQ ++ L
Sbjct: 199 SLRFNGNLTVIKQILSS---------------------------SMQLNESQRKVIVDIL 231
Query: 270 RRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKL 329
+L C HRS VELIWGPPGTGK KT+S+LL LLRIK RTL C T+ A+ +ASRV+KL
Sbjct: 232 CKLQCNHRSSVELIWGPPGTGKPKTLSILLYILLRIKYRTLICAATDTAVQRVASRVVKL 291
Query: 330 VKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFAPLS 385
VK N+ C LG IL FG+ KV+ EIYLN+++K L C S
Sbjct: 292 VK---------NSSSCSLGSILYFGDNGVAKVDTDIVEIYLNHQVKSLDSCLRTAS 338
>gi|297723429|ref|NP_001174078.1| Os04g0599650 [Oryza sativa Japonica Group]
gi|255675747|dbj|BAH92806.1| Os04g0599650 [Oryza sativa Japonica Group]
Length = 1774
Score = 298 bits (764), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 247/874 (28%), Positives = 417/874 (47%), Gaps = 82/874 (9%)
Query: 904 FVKAFRSINLIHKVLNSLGRFDELLMLENGSGNFMEAANMAVLEGDIFLATDLLQKAWNF 963
FVK+F S++ I LNS DELL +E GNF+EAA +A G+I L DLL+KA
Sbjct: 885 FVKSFSSMDHIRVFLNSKNLVDELLSVEMDMGNFVEAAGIAKHTGNILLEADLLEKAGFL 944
Query: 964 REASKLVLNFVFSNSLWSPGSRGWPLKQFTQKEELLQKAKSLAKNDSNQFYEFVCAEANI 1023
A++L+L +F NSLW+ S GWP K+F +KE+LL KAK +++N S FY VC+EA+
Sbjct: 945 ENATQLILLQLFVNSLWASHSTGWPPKRFAEKEQLLAKAKEMSRNVSESFYCLVCSEADA 1004
Query: 1024 LSNDHSNLVMMNQQFIDSKRHQNIRGEILSSRMILDFHLHSNASTYHWEDELVLNLTTYS 1083
LS++H +L + I+ + N+ E+++SR+ILD HL + AS Y +E E + +
Sbjct: 1005 LSDEHKSLASITYNLIEGNKCGNLLVELIASRLILDVHLQAEASGYCFESEPGSHDGRHC 1064
Query: 1084 DDRICKSQVSIETFVYFWNCWKDKIVKIFEYLGCLRVQQDVDGYRSYEDFCLSYFSVWKH 1143
D + +Q+S+ET VY WN W IVK+ +L + + D ED C YF W+
Sbjct: 1065 KDMLVLNQISLETLVYDWNYWSSIIVKVLRHLDHPKDAESNDLAAICEDLCAKYFG-WRK 1123
Query: 1144 CSNLDTTYLLLKSDAYWVRELSNMYVQKRGQLVSIDLHQLVSAAQSYWSTELLSVGINVL 1203
+ D Y++L +D+ W+ Y+Q+ G+ +D S A+ +W EL SVG++VL
Sbjct: 1124 DGDYD-RYVVLNTDSSWLSNTGRNYLQQDGRRCWLDTLHCHSCAKDFWINELYSVGLSVL 1182
Query: 1204 DKLEALHEQSIKNSLSVLCQSKCLSYIYDVAKFLLDSEFLYRHWDDVKTLQKFVELSTED 1263
KLE++ + +S S+ + + IY++AKFL +SEF T++ + L
Sbjct: 1183 KKLESIVQILPTSSCSL---GRTILVIYEIAKFLKESEFGMPK----NTIKYYSILCERR 1235
Query: 1264 FFRCIFPLDWRESLSKDMISLRQTEVCRSILEEIVSGYVTSK-SKLSYGQIGRIAVMILG 1322
FF +F L WR+ K ++ + + ++L + + Y+ S+ +K+++ Q+GRI +++L
Sbjct: 1236 FFELVF-LVWRDETPKSLLCILDSATTYNLLSDSICSYLGSRNNKMTHSQVGRITMLLLH 1294
Query: 1323 SGKLHNGLYRKVVERCVKDSPWQAFLKCLSQKMESEYLQHPSESNNERELYVIQKLHGAL 1382
+ +L + L ++VE + S W F L + ++ N ++ AL
Sbjct: 1295 AARLDDSLISQLVEYLDRGSEWATFFLSLKKYLD----------NGVSRDILLLDFKFAL 1344
Query: 1383 LDTYGANWRKEYDYMSPAYFLYLLERLLILIS---CFQGYIFTTKSSFVD---------- 1429
TY ANWR E+ Y+SP ++ L+E L L + Y+F TKS
Sbjct: 1345 DCTYKANWRAEH-YISPICYVDLIECLGFLATTHLVLNDYMFCTKSLLAKMMKCRTTKGY 1403
Query: 1430 WRIYQEPHTNPTASFVTDVWQSFGDVLDSIFFIVQHFLYNEKEMIEWISKSHKNVNNYHS 1489
+ P T+ + + F I+ V+ L +++ ++EW+ + ++Y
Sbjct: 1404 FETCMAPSTDIDLGYAGHSARCF------IYLSVKDLLGSKRMIVEWVQNTSTPTSSYVP 1457
Query: 1490 LVVLRLVVIICLLHLNFGKFG-SSLRDLLGRKYVSRLLPLEFCDALR---KIENHNCLNV 1545
++LRLV+ + L+ +N + L + +V LP EF + +R ++++ N
Sbjct: 1458 -ILLRLVITLYLVTVNQDDGDLYEVTAFLEKNHVFTDLPPEFSEKIRNALRMKSRTVKNF 1516
Query: 1546 HEI-SQAFKKIGNPLVIASLGKNCSQFLC-PDAIFVNMKVMKSTDEIFGILYPKMEACQV 1603
+ + A IG +V+ K C PD +N ++ S D +
Sbjct: 1517 MRVFADALAAIGTRMVVMGDIKKAMAHKCQPD---LNADMISSVD------LSDAKKVMA 1567
Query: 1604 QVGTSKDVPSKRPASLPEDTDAQNMNDNTLVMNLDQLCKVFEALKMVDNGNNGNYRRSV- 1662
+ T K K+ LPE N N + L V + K N N + +
Sbjct: 1568 LLSTEKSSSLKQEPQLPEIKSVCNKICNATSGHF-PLTSVGGSQKSTSNFNLSDVDHPLL 1626
Query: 1663 ----KYQVGTSKDVPSKRPASLPED------TDAQNKNDNTMVMNLDQLCKALE------ 1706
+QV ++P K+ SL + + + ++ L +CK +E
Sbjct: 1627 EKFEAFQV----NMPQKKNGSLISQILRSPLSWIEQRAPPVQMLELRHICKQVEEQHVRE 1682
Query: 1707 --ALKMLDYGNNGNHGNSVKYQVGTSKDVPSKRS 1738
AL + D +N HG+ K +G DV +S
Sbjct: 1683 KRALSVKDLHSNREHGDGEK-NIGKIVDVQGSQS 1715
>gi|242061192|ref|XP_002451885.1| hypothetical protein SORBIDRAFT_04g009255 [Sorghum bicolor]
gi|241931716|gb|EES04861.1| hypothetical protein SORBIDRAFT_04g009255 [Sorghum bicolor]
Length = 602
Score = 289 bits (740), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 206/571 (36%), Positives = 290/571 (50%), Gaps = 93/571 (16%)
Query: 307 CRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPG-- 364
CR L C PTN AI ++ASR+L+L K+ + + S+ LGD+LLFGN+ R+ + G
Sbjct: 6 CRVLTCAPTNTAIRQVASRLLELRKQQHPSGA-SDDGGGCLGDLLLFGNRQRMSIATGSS 64
Query: 365 FEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSE 424
++I+L+ R+ +LR CF+P +GWR C S +++ ++ ++ ED NQ
Sbjct: 65 LDDIFLDTRLNRLRACFSPDTGWRQCLRS-VEVFLSGRPRWWLH-------EDRRRNQVT 116
Query: 425 EKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVAL 484
R RF + L +C H+P++ I E+++ + AL
Sbjct: 117 FTG-------------------RSRFHQILQRLSSCFRTIMLHVPRAIIMESNYINIFAL 157
Query: 485 KSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNL 544
+L F LL + E+ + +E +L + + + L + R L
Sbjct: 158 IDMLQGFSRLLDWMCCMCSGNER---EACNE-------------KLERYKVDILFLTRAL 201
Query: 545 WNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKE 604
L LP T S+ + +FCF+ ASL F T S S K+ + ++ L+IDEAAQLKE
Sbjct: 202 NRGL---KLPLTRSEKQIMEFCFESASLVFCTVSGSAKMLG---QRMDLLLIDEAAQLKE 255
Query: 605 SESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQY 664
ES IPLQL G+ HAVLIGDECQLPA V+SK++ A GRS+FERL+ H KHLLNIQY
Sbjct: 256 CESLIPLQLYGLKHAVLIGDECQLPATVKSKVAASALLGRSMFERLSLQGHKKHLLNIQY 315
Query: 665 RMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSC 724
RMHPSIS+FPN FY ++ILDG NV +E+ YL G FG YSFINI G E S
Sbjct: 316 RMHPSISIFPNTSFYSSKILDGPNVMQGGHERSYLEGAMFGPYSFINIDGREES--GRSK 373
Query: 725 RNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKV 784
RN+ EV+ + +IL KL + + S G +V R ++ + V+
Sbjct: 374 RNMAEVAVIKEILHKLKEGY------ASAGSARQLRRRVPGQRGGHHHPFDRQ----VQQ 423
Query: 785 KSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTR---ARHCLWILGSERTLI 841
+SI P R R ARHCLWILG+ TL
Sbjct: 424 QSIHRL--------------------------PLRAPTCKRRLDGARHCLWILGNAATLH 457
Query: 842 SSESIWGALVCDAKARQCFFNADEERNLAKA 872
S SIW LV DA+ R C FN ++ + A +
Sbjct: 458 GSGSIWAELVRDAEKRGCLFNWNDGTSAASS 488
>gi|449445383|ref|XP_004140452.1| PREDICTED: uncharacterized protein LOC101214154 [Cucumis sativus]
Length = 917
Score = 282 bits (721), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 178/493 (36%), Positives = 274/493 (55%), Gaps = 20/493 (4%)
Query: 1150 TYLLLKSDAYWVRELSNMYVQKRGQLVSIDLHQLVSAAQSYWSTELLSVGINVLDKLEAL 1209
TY L +DA W+ + VQ G+++S+D+ Q AA+SYWSTEL+SVG+ VL+ L +
Sbjct: 10 TYQLSFTDADWIIHSNLQSVQTNGEMMSMDVQQFALAARSYWSTELISVGMKVLEFLSNI 69
Query: 1210 HEQSIKNSLSVLCQSKCLSYIYDVAKFLLDSEFLYRHWDDVKTLQKFVELSTEDFFRCIF 1269
H S+ +S S QS I D+A FLL S L R DD K L ++E T+ FF +F
Sbjct: 70 HRFSVMHSFSKFRQSSAAIAIVDIANFLLSSN-LARLPDDDKQLHDYLESYTDHFFDNMF 128
Query: 1270 PLDWRESLSKDMISLRQTEVCRSILEEIVSGYVTSKSKLSYGQIGRIAVMILGSGKLHNG 1329
W + ++K MI+LR++ + RS+ E + + SK +LSY +IG++ + +LGSGKL +G
Sbjct: 129 GACWTDPMTKSMITLRESGLSRSVTEAFILKTINSKGQLSYEKIGKVVIALLGSGKLISG 188
Query: 1330 LYRKVVERCVKDSPWQAFLKCL------SQKMESEYLQHPSESNNERELYVIQKLHGALL 1383
LY K+ RC W+A + L SQ ES + E++ E EL I +LH AL+
Sbjct: 189 LYDKIAGRCNAKLHWKAVIDALKRHVIASQTSESSVARKVIEASGESEL--INQLHEALM 246
Query: 1384 DTYGANWRKEYDYMSPAYFLYLLERLLILISCFQGYIFTTKSSFVDWRIYQEPHTNPTAS 1443
T+ NW+KE+++M+P FLY++ER +L+S Q +TT+SSF++W I +E +
Sbjct: 247 LTF-VNWKKEFEFMTPNCFLYIVERQFVLVSMSQRCFYTTRSSFIEWLICEEWSSRQVQR 305
Query: 1444 FV-TDVWQSFGDVLDSIFFIVQHFLYNEKEMIEWISKSHKNVNNYHSLVVLRLVVIICLL 1502
V T++ S + DSI +V L+N EWI +S+ N Y+ + +LRLV+I+CLL
Sbjct: 306 MVNTEI--SSEHLFDSIVNMVHELLFNNCGAREWIKRSNINSKEYYPIFLLRLVIILCLL 363
Query: 1503 HLNFGKFGSSLRDLLGRKYVSRLLPLEFCDAL--RKIENHNCLNVHEISQAFKKIGNPLV 1560
N GK+ S L D + + + LP F R+ +NH+ LN +++A KI NPLV
Sbjct: 364 SANLGKYYSMLYDFVRKPDMHSQLPEAFSKIFRQRRKQNHHFLNY--MAEAVWKIRNPLV 421
Query: 1561 IASLGKNCSQFLCPDAIFVNMKVMKSTDEIFGILYPKMEACQVQVGTSKDVPSKRPASLP 1620
C + + P I + M + D+I +L+ K G+S S++ S+
Sbjct: 422 KVCFKDVCEKPVPPAIILIRMNKIGKKDDIRKLLFAKNLTYNHNCGSSSPSASQKAESIN 481
Query: 1621 EDTDAQNMNDNTL 1633
T ++N TL
Sbjct: 482 GST---SLNSKTL 491
>gi|242035239|ref|XP_002465014.1| hypothetical protein SORBIDRAFT_01g030480 [Sorghum bicolor]
gi|241918868|gb|EER92012.1| hypothetical protein SORBIDRAFT_01g030480 [Sorghum bicolor]
Length = 918
Score = 275 bits (703), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 201/609 (33%), Positives = 288/609 (47%), Gaps = 147/609 (24%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTN 316
LN+SQ+ A+ +C+ +C HRS V L+WGPPGTGKT TV+++L LL + RTLAC PTN
Sbjct: 28 LNDSQLDAVASCVLASECSHRSSVGLVWGPPGTGKTTTVAVMLQMLLMKEQRTLACAPTN 87
Query: 317 VAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKK 376
+A+ ++ASR+L+L+ + R+ S LGDI+LFGNKDRL++ EIYL+ R++K
Sbjct: 88 MAVLQVASRLLELIGDFSLREHYS------LGDIILFGNKDRLQIGKLLSEIYLDDRVQK 141
Query: 377 LRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSK 436
L F GW+HC S++ L C+S+Y V+ Q + R T
Sbjct: 142 LLSNFNRQHGWKHCVDSVVTFLVHCISRYRTSVDI----------QQGSGDARDLT---- 187
Query: 437 GERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLF 496
F KY RF L CI F HLP+S + +N F +M++ KSL+ L
Sbjct: 188 -----FKKYFTSRFSTLANELVRCIDTFFDHLPRSSLGKN-FDKMMSAKSLVGKLQQSLS 241
Query: 497 QDNVVSKELEKLFSHS--VDEGISWAFVRKRYLLQLHQR----------RSECLSVLRNL 544
DNV + L +F+ + V + H +S C+ L
Sbjct: 242 ADNVSDELLFTIFNPADEVPDSSGSHDDLIDDADDFHDTNISLDSPLDIKSHCIKTLM-- 299
Query: 545 WNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKE 604
+L ++ LPC ++ + + C K A L F TASSS+ +L
Sbjct: 300 --ALSKMRLPCEDNEPSIRELCLKHAKLIFCTASSSF-------------------ELFR 338
Query: 605 SESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQY 664
+S P+ + I+ A + EC+ SL L L +H+L
Sbjct: 339 LQSVRPISILVIDEAAQL-KECE-----------------SLVPLL--LQGIEHVL---- 374
Query: 665 RMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRE--DFIYH 722
++DG VK K Y K YL G +G YSFI+I E D +
Sbjct: 375 ------------------LIDGPIVKQKDYAKSYLPGPIYGAYSFIHIDNDMEMLDSLGQ 416
Query: 723 SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTV 782
S +N+ EV+ V I+++L KA QV+A++ K+G ++E D +V
Sbjct: 417 SSKNMAEVAVVANIIERLAKA------------------QVIALQDKLGRKFEKHDFLSV 458
Query: 783 KVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLIS 842
VKSIDGFQGGEEDII+ISTV R+CLWILG+ TL++
Sbjct: 459 TVKSIDGFQGGEEDIILISTV------------------------RYCLWILGNGTTLLA 494
Query: 843 SESIWGALV 851
S SIW LV
Sbjct: 495 SNSIWADLV 503
>gi|440577309|emb|CCI55316.1| PH01B001I13.12 [Phyllostachys edulis]
Length = 558
Score = 274 bits (701), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 180/464 (38%), Positives = 266/464 (57%), Gaps = 62/464 (13%)
Query: 385 SGWRHCFSSMIDLLEDCVSQYHIYVE----KLKERE----------------DC--NVNQ 422
+GWRHC S+IDLLE+ V++Y +++E K+K+RE +C NV +
Sbjct: 96 AGWRHCLCSLIDLLENPVTKYKLHIEDILEKMKDREKESPKNDKWQAHRGKHNCENNVER 155
Query: 423 SEEKECRKETEG---SKGERK-----PFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYIS 474
E+++ + EG S+ + PF ++++ +K +L +CI I P++ +
Sbjct: 156 PEDEKEKYRKEGWYVSEAMEEAFTVLPFKDFLKDHYKKLSGNLCDCIEILYNDHPRNSET 215
Query: 475 ENSFQEMVALKSLLDSFGNLLFQD----NVVSKELEKLFSHSVDEGISW----AFVRKRY 526
FQ M+ + L+ L+ D ++ S EL + I W A+VR
Sbjct: 216 RQCFQCMLEVLELIKILHILINCDMDNGDIWSNELLESKIEEDGNPILWSGQLAYVRTNT 275
Query: 527 LLQLHQR--RSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLH 584
+ R RS C+ LR L +L+ LP ++ + +R T SSS++L+
Sbjct: 276 CKKSKFRLSRSLCVQELRYLCKNLE---LPNCYITRPIKVYLLQRTRCILCTVSSSFRLY 332
Query: 585 SVEI------------KP----LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 628
+V + KP L L++DEAAQ+KE E+ IPLQL GI AV IGDE Q
Sbjct: 333 NVPMDNSSSDVYGVFKKPETSNLELLIVDEAAQVKECETLIPLQLPGIRLAVFIGDENQ- 391
Query: 629 PAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
P++V+SKISD A FGRS+FERL+ L +SKHLL++QYRMHP IS FP FY +I DG N
Sbjct: 392 PSLVKSKISDNANFGRSVFERLSLLGYSKHLLSVQYRMHPEISKFPVATFYDGKISDGPN 451
Query: 689 VKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVG 746
V SK+Y++++L FG YSFIN+ GG E H S +N +EV+AV++I+Q+L+K V
Sbjct: 452 VTSKNYDRRFLASKIFGPYSFINVDGGHETTEKHGRSLKNTIEVAAVLRIVQRLFKESVS 511
Query: 747 SKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGF 790
+ K+++GVVSPY AQV AI++++G Y DGF+VKVKS+DGF
Sbjct: 512 TGSKLTVGVVSPYNAQVRAIQERVGKSYNMYDGFSVKVKSVDGF 555
>gi|242074208|ref|XP_002447040.1| hypothetical protein SORBIDRAFT_06g027384 [Sorghum bicolor]
gi|241938223|gb|EES11368.1| hypothetical protein SORBIDRAFT_06g027384 [Sorghum bicolor]
Length = 911
Score = 271 bits (693), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 225/813 (27%), Positives = 389/813 (47%), Gaps = 69/813 (8%)
Query: 904 FVKAFRSINLIHKVLNSLGRFDELLMLENGSGNFMEAANMAVLEGDIFLATDLLQKAWNF 963
+VK F S++ I LNS DELL +E GNF+EAA +A +GDI L ++L+K +F
Sbjct: 4 YVKDFNSMDHIRAFLNSRNLLDELLSIEMEMGNFLEAAGIAERKGDILLEVNILEKGESF 63
Query: 964 REASKLVLNFVFSNSLWSPGSRGWPLKQFTQKEELLQKAKSLAKNDSNQFYEFVCAEANI 1023
A++L+L +V +NSLWSP SRGWP K F +KE+LL K K +AK S F+ F C EA++
Sbjct: 64 VNATQLLLLYVTANSLWSPYSRGWPPKSFAEKEKLLIKVKEMAKKVSEDFFCFACFEADL 123
Query: 1024 LSNDHSNLVMMNQQFIDSKRHQNIRGEILSSRMILDFHLHSNASTYHWEDELVLNLTTYS 1083
LS+ H ++ + ++ ++ N+ E++S+R I+D HL S S Y+ E L S
Sbjct: 124 LSDSHKSVASLTYSLLEGRKCGNLLVELISARYIIDVHLQSQISAYNIE------LEPGS 177
Query: 1084 DDRICK-----SQVSIETFVYFWNCWKDKIVKIFEYLGCLRVQQDVDGYRSYEDFCLSYF 1138
+D +C +Q+S+ET WN W+ + K+ L V + D ED C +F
Sbjct: 178 EDELCYKMMACNQMSLETLACIWNQWRLIVTKVLAQLYPSEVLKSNDSAAMCEDLCAKFF 237
Query: 1139 SVWKHCSNLDTTYLLLKSDAYWVRELSNMYVQKRGQLVSIDLHQLVSAAQSYWSTELLSV 1198
+ K N Y++L D+ W+ + +++ G +D S A+++ EL SV
Sbjct: 238 GLRKDSGN---RYVVLNVDSGWLANIGRSSLEQDGNRCLLDTVHCKSCARNFLVNELSSV 294
Query: 1199 GINVLDKLEALHEQSIKNSLSVLCQSKCLSYIYDVAKFLLDSEFLYRHWDDVKTLQKFVE 1258
G++VL KLE++ E S + S S Q + +Y++A FL +SEF K L+
Sbjct: 295 GLSVLHKLESIFEASREKSSSPYAQWRNTVILYEIAMFLKESEFCMAK--SSKKLRNSFI 352
Query: 1259 LSTEDFFRCIFPLDWRESLSKDMISLRQTEVCRSILEEIVSGYV-TSKSKLSYGQIGRIA 1317
+ + FFR +F L W + ++ S+ + ++ + + Y L++G +GR+
Sbjct: 353 MCEQSFFRLLF-LTWADETAESFFSILDSPPAYGLIVDSLGSYTRVGNQNLTHGHLGRVT 411
Query: 1318 VMILGSGKLHNGLYRKVVERCVKDSPWQAFLKCLSQKMESEYLQHPSESNNERELYVIQK 1377
+ +L + K + L + + DS W F + L + ++S + P +++
Sbjct: 412 MYLLYTAKFDDMLNLGLEQYLNPDSEWALFFQSLKKFLDSGVGRCP----------LVEN 461
Query: 1378 LHGALLDTYGANWRKEYDYMSPAYFLYLLERL-LILISCF--QGYIFTTKSSFVDWRIYQ 1434
AL T+ ANWR E DYMSP ++ L+E L +S F G + TKS V +
Sbjct: 462 FKQALKFTFDANWR-ERDYMSPICYMNLMECLGFFALSRFMLNGCVLCTKSMLV-----K 515
Query: 1435 EPHTNPTASFVTDVWQS-FGDV---LDSIFFI--------VQHFLYNEKEMIEWISKSHK 1482
+ +F+ S GD LD + + +++ L ++ ++ EW+ +
Sbjct: 516 MLKCRTSKAFLDSCLASGLGDQDMDLDCMAYAPGVFICKSIRYILESKHDIQEWVRNTKP 575
Query: 1483 NVNNYHSLVVLRLVVIICLLHLNFGKFGS--SLRDLLGRKYVSRLLPLEFCDALRKIENH 1540
+ + V+LRLV+++ L+ L + G + L + + LP +F + +++
Sbjct: 576 AIT--YVPVLLRLVIMLYLVTLTL-QLGDCYEITAFLHKHRIFEDLPPDFSKKIMPLKSR 632
Query: 1541 NCLNVH---EISQAFKKIGNPLVIASL--GKNCSQFLCPDAIFVNMKVMKSTDEIFGILY 1595
H A IGNP+V+ L G S+ L +A +++ + +++ L
Sbjct: 633 FGTVTHFTRVFGDALAAIGNPMVVLGLPEGPLISRGL--NAYRISIMDLSDVNKVMAYLR 690
Query: 1596 PKMEACQVQVGTSKDVPSKRPASLPEDTDAQNMNDNTLVMNL-DQLCKVFEALKMVDNGN 1654
P + +Q T + + + P N DN + M+L D+ +E L + N
Sbjct: 691 PDEQKSAMQKETK--ICNVTSGNFPIARMHDNKMDNRIEMHLSDERISFWEKLSLFSLHN 748
Query: 1655 NGNYRRSVKYQVGTSKDVPSKRPASLPEDTDAQ 1687
+ R + + + + P PE+ DAQ
Sbjct: 749 DA--RVVILFLESLLSWLELRGP---PENIDAQ 776
>gi|356569408|ref|XP_003552893.1| PREDICTED: LOW QUALITY PROTEIN: helicase SEN1-like [Glycine max]
Length = 522
Score = 265 bits (677), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 161/363 (44%), Positives = 216/363 (59%), Gaps = 45/363 (12%)
Query: 527 LLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSV 586
L +L ++ ECL L++L + +LP T K + F A L F TA+SS KL +
Sbjct: 182 LGRLGIKKEECLVKLKSLSQTT---SLPNITDKYEMAKFYLMSARLIFCTAASSTKLFTD 238
Query: 587 EIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSL 646
+ P+ FLVID V+S++S EA +G SL
Sbjct: 239 GMTPVEFLVID----------------------------------VKSQVSQEAEYGSSL 264
Query: 647 FERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGT 706
FERL SL H KHLLN+QYRMHPSIS+FPN +FY QI D V+ SY ++ L G + +
Sbjct: 265 FERLVSLGHKKHLLNVQYRMHPSISVFPNKEFYEKQISDALFVREMSYNRRSLEGKMYDS 324
Query: 707 YSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
YSFINI G +N+ E +AV KI++ L ++ + +KVSIG++SPY QV I
Sbjct: 325 YSFINIAKGNT-----VXKNMAEAAAVCKIIESLENEFLSTGKKVSIGIISPYNGQVYEI 379
Query: 767 RKKIGFEYENKD-GFTVKVKSIDGFQGGE-EDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
+++I ++ D F+V V+S+DGFQGGE + IIIISTVR N G IGF+ QR NVAL
Sbjct: 380 QERITWQNLVXDPNFSVSVRSVDGFQGGEDDIIIIISTVRSNGNGKIGFLDNRQRANVAL 439
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIG 884
TR+RHCLWILG+E+TL S +S+W LV DAK R CF NA +++ LAKA +E +EI
Sbjct: 440 TRSRHCLWILGNEKTLSSGDSLWRNLVNDAKKRGCFHNAXDDKKLAKA-IEEEALRIEIP 498
Query: 885 AES 887
ES
Sbjct: 499 DES 501
Score = 99.8 bits (247), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 90/134 (67%), Gaps = 13/134 (9%)
Query: 254 SSTLNESQVGAMLACL--RRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLA 311
S LN+SQ A+++C+ R++ H ++LIWGPPGTGKTKTV+ LL +LL++K RTLA
Sbjct: 39 SQNLNQSQKEAVVSCVTSRKVITHHNDTIKLIWGPPGTGKTKTVASLLFSLLKLKTRTLA 98
Query: 312 CTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNP--GFEEIY 369
C PTN A+ E+A+R+ LVKES + D+ + DI++FGN+ R+KV+ +++
Sbjct: 99 CAPTNTAVLEVAARLQNLVKESLECDTFG------IRDIVVFGNRSRMKVDSYWCLHDVF 152
Query: 370 LNYRIKKLRECFAP 383
L++R+ L F P
Sbjct: 153 LDFRVDNL---FKP 163
>gi|222618365|gb|EEE54497.1| hypothetical protein OsJ_01623 [Oryza sativa Japonica Group]
Length = 1157
Score = 256 bits (655), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 231/864 (26%), Positives = 391/864 (45%), Gaps = 105/864 (12%)
Query: 18 SSSKKAVGFAGHTVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQ 77
SS A G TV SW+++DI ++V+K+P F+ ++ Y L EE R+
Sbjct: 172 SSRDDADGGLSKTVLSWTIQDIL----LDNEVQKVPTKFKGLQHYLDVHSNLLREEVRIT 227
Query: 78 LRSGLEAMRRAPYAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLA 137
++S L + + P + Y I++D + I N + GD+ L+
Sbjct: 228 IKSSLLKVETTQCFRDFVVSFAGP--PSIYYIDIDLY--GIDNC---QHVVKDGDLFFLS 280
Query: 138 DFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIY 197
S R + F T V D N+ + +K+ N + D + + +
Sbjct: 281 -------SQPLRGQLSGCFGIATDVGCD---NQFQRSFKMLVSENQKKTD-LESIRYICF 329
Query: 198 LTNILPNKRIWNSL--HMCGNWKVITQVLGTDSVVDERC---ELCSVQRKGQWDEKFGPS 252
LTNI+ N I ++ G +I ++ + + C ELC+ FG
Sbjct: 330 LTNIVDNLNISKAMVTMSSGRCGIINSIIRRNEKCKKTCACAELCA----------FGIE 379
Query: 253 FSSTL---NESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRT 309
SS L NE Q AM + + C H V+L+WGPPGTGKT+ + L + +L ++ R
Sbjct: 380 DSSYLDKYNEEQQCAMTCIMSKAGCHHNHSVDLVWGPPGTGKTRLAAGLAICMLNLRLRI 439
Query: 310 LACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGN---KDRLKVNPGFE 366
L C P I LK ++E+Y P +G L+ N KD +
Sbjct: 440 LVCVPLKRDIHIF----LKSLQENY--------PSFNIGKALVLNNLLDKDMCNI---IS 484
Query: 367 EIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEK--LKEREDCNVNQSE 424
E L R +L + L W+ M LL +Y K + ED N+ E
Sbjct: 485 ETTLANRASEL---YVALFVWKAWVKEMAALL-----GLDMYCRKKCVHHDEDLTCNKCE 536
Query: 425 EKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVAL 484
E L +++F V LR C L + +S+ + L
Sbjct: 537 PIEFS-------------LMSFKKKFGNTAVELRKCSTCLIKSLSATSLSDLDVTNVNNL 583
Query: 485 KSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNL 544
L F NL+ + + +++ F ++ + + F L Q R CL++ +
Sbjct: 584 LIALSQFENLMQKSEISDYSVKRAFGITI--AVDYDFEDCCTAKSLDQIRRTCLALTETV 641
Query: 545 WNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKE 604
+S++ LP LEDFC + + + ST +L S+++ ++ L++D+AAQ+KE
Sbjct: 642 LSSIE---LPQLEGWSDLEDFCIRHSHIIISTPGCFARLQSLKMDQVDVLIVDKAAQIKE 698
Query: 605 SESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQY 664
++ +PL + H VL+GD L +V+++ EAG RSLF+RL L+ ++H L QY
Sbjct: 699 NDLLVPLSIPP-RHVVLLGDHQHLQPIVKTEGCKEAGCTRSLFQRLLHLSFTRHKLIKQY 757
Query: 665 RMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSC 724
MHP I FP+ FY+++I+DG +V+S +F Y+F +++ EDF SC
Sbjct: 758 MMHPLIRQFPSEHFYKDKIVDGQSVES--------INLQFPAYTFFDVV-DMEDF---SC 805
Query: 725 --RNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTV 782
+ +E + V+ +LQKL + + ++++G+V + QV AI ++G +Y+N D +
Sbjct: 806 MGKKSMEAAVVLFLLQKLCEGLTNAAGRLNVGIVCFCSNQVNAIITQLGRKYQNHDRVNL 865
Query: 783 KVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLIS 842
+V S++ D+II+S++ + + R+NVALT++RHCLWI+G L+
Sbjct: 866 EVNSLENMHEDWYDVIILSSLFDDKSE----LPTDNRINVALTKSRHCLWIIGQADILLQ 921
Query: 843 SESIWGALVCDAKARQCFFNADEE 866
W +L+ + + C D +
Sbjct: 922 IPGTWKSLIHHSMQQNCVVVLDSK 945
>gi|77552192|gb|ABA94989.1| hypothetical protein LOC_Os11g42860 [Oryza sativa Japonica Group]
Length = 1197
Score = 255 bits (651), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 231/864 (26%), Positives = 390/864 (45%), Gaps = 105/864 (12%)
Query: 18 SSSKKAVGFAGHTVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQ 77
SS A G TV SW+++DI ++V+K+P F+ ++ Y L EE R+
Sbjct: 192 SSRDDADGGLSKTVLSWTIQDIL----LDNEVQKVPTKFKGLQHYLDVHSNLLREEVRIT 247
Query: 78 LRSGLEAMRRAPYAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLA 137
++S L + + P Y I++D + I N + GD+ L+
Sbjct: 248 IKSSLLKVETTQCFRDFVVSFAGPPSI--YYIDIDLY--GIDNC---QHVVKDGDLFFLS 300
Query: 138 DFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIY 197
S R + F T V D N+ + +K+ N + D + + +
Sbjct: 301 -------SQPLRGQLSGCFGIATDVGCD---NQFQRSFKMLVSENQKKTD-LESIRYICF 349
Query: 198 LTNILPNKRIWNSL--HMCGNWKVITQVLGTDSVVDERC---ELCSVQRKGQWDEKFGPS 252
LTNI+ N I ++ G +I ++ + + C ELC+ FG
Sbjct: 350 LTNIVDNLNISKAMVTMSSGRCGIINSIIRRNEKCKKTCACAELCA----------FGIE 399
Query: 253 FSSTL---NESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRT 309
SS L NE Q AM + + C H V+L+WGPPGTGKT+ + L + +L ++ R
Sbjct: 400 DSSYLDKYNEEQQCAMTCIMSKAGCHHNHSVDLVWGPPGTGKTRLAAGLAICMLNLRLRI 459
Query: 310 LACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGN---KDRLKVNPGFE 366
L C P I LK ++E+Y P +G L+ N KD +
Sbjct: 460 LVCVPLKRDIHIF----LKSLQENY--------PSFNIGKALVLNNLLDKDMCNI---IS 504
Query: 367 EIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEK--LKEREDCNVNQSE 424
E L R +L + L W+ M LL +Y K + ED N+ E
Sbjct: 505 ETTLANRASEL---YVALFVWKAWVKEMAALL-----GLDMYCRKKCVHHDEDLTCNKCE 556
Query: 425 EKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVAL 484
E L +++F V LR C L + +S+ + L
Sbjct: 557 PIEFS-------------LMSFKKKFGNTAVELRKCSTCLIKSLSATSLSDLDVTNVNNL 603
Query: 485 KSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNL 544
L F NL+ + + +++ F ++ + + F L Q R CL++ +
Sbjct: 604 LIALSQFENLMQKSEISDYSVKRAFGITI--AVDYDFEDCCTAKSLDQIRRTCLALTETV 661
Query: 545 WNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKE 604
+S++ LP LEDFC + + + ST +L S+++ ++ L++D+AAQ+KE
Sbjct: 662 LSSIE---LPQLEGWSDLEDFCIRHSHIIISTPGCFARLQSLKMDQVDVLIVDKAAQIKE 718
Query: 605 SESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQY 664
++ +PL + H VL+GD L +V+++ EAG RSLF+RL L+ ++H L QY
Sbjct: 719 NDLLVPLSIPP-RHVVLLGDHQHLQPIVKTEGCKEAGCTRSLFQRLLHLSFTRHKLIKQY 777
Query: 665 RMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSC 724
MHP I FP+ FY+++I+DG +V+S +F Y+F +++ EDF SC
Sbjct: 778 MMHPLIRQFPSEHFYKDKIVDGQSVES--------INLQFPAYTFFDVV-DMEDF---SC 825
Query: 725 --RNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTV 782
+ +E + V+ +LQKL + + ++++G+V + QV AI ++G +Y+N D +
Sbjct: 826 MGKKSMEAAVVLFLLQKLCEGLTNAAGRLNVGIVCFCSNQVNAIITQLGRKYQNHDRVNL 885
Query: 783 KVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLIS 842
+V S++ D+II+S++ + + R+NVALT++RHCLWI+G L+
Sbjct: 886 EVNSLENMHEDWYDVIILSSLFDDKSE----LPTDNRINVALTKSRHCLWIIGQADILLQ 941
Query: 843 SESIWGALVCDAKARQCFFNADEE 866
W +L+ + + C D +
Sbjct: 942 IPGTWKSLIHHSMQQNCVVVLDSK 965
>gi|357168354|ref|XP_003581606.1| PREDICTED: uncharacterized protein LOC100839489 [Brachypodium
distachyon]
Length = 1806
Score = 252 bits (643), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 176/537 (32%), Positives = 278/537 (51%), Gaps = 33/537 (6%)
Query: 904 FVKAFRSINLIHKVLNSLGRFDELLMLENGSGNFMEAANMAVLEGDIFLATDLLQKAWNF 963
FVKAF S++ + LNS DELL LE GNF+EAA +A +G++ L D+L+KA F
Sbjct: 890 FVKAFSSMDHVRAFLNSRNLVDELLSLEMEMGNFLEAAAIAKHKGNVLLEVDMLEKANLF 949
Query: 964 REASKLVLNFVFSNSLWSPGSRGWPLKQFTQKEELLQKAKSLAKNDSNQFYEFVCAEANI 1023
A+ L+L + +SLWS SRGWP K++ +KE+LL KAK +AKN S FY F C E +
Sbjct: 950 ENATHLLLLHIVVDSLWSSNSRGWPPKRYAEKEQLLAKAKEMAKNVSEFFYCFACLETDA 1009
Query: 1024 LSNDHSNLVMMNQQFIDSKRHQNIRGEILSSRMILDFHLHSNASTYHWEDELVLNLTTYS 1083
+S+ H +L +N ++S++ N+ E+++SR ILD HL S AS Y+ L L S
Sbjct: 1010 MSDVHKSLPSLNTTLLESRKCGNLFVELVASRSILDVHLQSRASGYN------LELGPGS 1063
Query: 1084 DDR------ICKSQVSIETFVYFWNCWKDKIVKIFEYLGCLRVQQDVDGYRSYEDFCLSY 1137
+D + +Q+S +T VYFWN WK IVK+ +L + D YED C Y
Sbjct: 1064 EDESSCSGMLACNQISPQTLVYFWNHWKSIIVKVLCHLRHSDGLESNDYAIMYEDLCAKY 1123
Query: 1138 FSVWKHCSNLDTTYLLLKSDAYWVRELSNMYVQKRGQLVSIDLHQLVSAAQSYWSTELLS 1197
F W+ + D Y++L ++ W+ +Q+ G +D+ Q S A + EL S
Sbjct: 1124 FG-WRK-DDEDDRYVVLNMNSSWLSITGRNSLQQDGNRCWLDVLQCHSCALHFCMNELSS 1181
Query: 1198 VGINVLDKLEALHEQSIKNSLSVLCQSKCLSYIYDVAKFLLDSEFLYRHWDDVKTLQKFV 1257
VG++VL KLE+ + K + S L I ++AKFL + EF L+ F
Sbjct: 1182 VGLSVLKKLESFVQVPPKQASSYALVRTVL-MINEIAKFLEEPEFSMPK--STIKLKSFF 1238
Query: 1258 ELSTEDFFRCIFPLDWRESLSKDMISLRQTEVCRSILEEIVSGYVTSKSK-LSYGQIGRI 1316
L FF +F L WR+ ++ ++ + + ++ + + Y+ +K L++G +GR
Sbjct: 1239 ALCERRFFELVFLL-WRDGTARSLLCVLDSPTAYGLIADSLGAYLRPTNKNLTHGHLGRT 1297
Query: 1317 AVMILGSGKLHNGLYRKVVERCVKDSPWQAFLKCLSQKMESEYLQHPSESNNERELYVIQ 1376
+++L + +L + L ++ + +S W F +CL + +++ +I
Sbjct: 1298 TLLLLHAARLDDVLISRLQQYLDNNSEWTDFFRCLKRFLDT----------GVDRTSLIS 1347
Query: 1377 KLHGALLDTYG-ANWRKEYDYMSPAYFLYLLERLLILISCF---QGYIFTTKSSFVD 1429
AL T+ WR E DY+SP ++ L+E L L S + IF T S V+
Sbjct: 1348 NFKLALDFTFNEVEWRDELDYISPICYVGLIECLAFLSSAYLIQNDCIFCTSSVLVN 1404
>gi|125577857|gb|EAZ19079.1| hypothetical protein OsJ_34605 [Oryza sativa Japonica Group]
Length = 1038
Score = 244 bits (623), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 222/840 (26%), Positives = 378/840 (45%), Gaps = 85/840 (10%)
Query: 30 TVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAP 89
TV SW+++DI ++V+K+P F+ ++ Y L+EE R+ ++S L +
Sbjct: 56 TVLSWTIQDIL----LDNEVQKVPTKFKGLQHYLDVHSNLLMEEVRITIKSSLLKVETTQ 111
Query: 90 YAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRR 149
+ P Y I++D + I N + GD+ L+ + R
Sbjct: 112 CFRDFVVSFAGPPSI--YYIDIDLY--GIDNC---QHVVKDGDLFFLS-------TQPLR 157
Query: 150 VGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWN 209
+ F T V D N+ + +K+ N + D + + +LTNI+ N I
Sbjct: 158 GQLSGCFGIATDVGCD---NQFQRSFKMLVSENQKNTD-LESIRYICFLTNIMDNLNISK 213
Query: 210 SL--HMCGNWKVITQVLGTDSVVDERC---ELCSVQRKGQWDEKFGPSFSSTL---NESQ 261
++ G +I ++ + + C ELC+ FG SS L NE Q
Sbjct: 214 AMVTMSSGRCGIINSIIRRNEKCKKTCACAELCA----------FGIEDSSYLEKYNEEQ 263
Query: 262 VGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITE 321
AM + ++ C H V+L+WGPPGTGKT+ + L + +L ++ R L C P I
Sbjct: 264 QCAMTCIMSKVGCHHNHSVDLVWGPPGTGKTRLAAGLAICMLNLRLRILVCVPKKRDI-H 322
Query: 322 LASRVLKLVKESYKRDSRSNTPICPLGDILL--FGNKDRLKVNPGFEEIYLNYRIKKLRE 379
+ + L+ V S+ D R G ++L N + +K E+ L R + L
Sbjct: 323 IFLQSLQKVDPSF--DFR--------GIVVLNRLSNSESIKNCNKLHEMNLENRAQALYC 372
Query: 380 CFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGER 439
C WR + +L Y ++ + + C + C K SK
Sbjct: 373 CIFL---WRSFVKELGFVL-----GLKPYCKEKCDHDGCTI-------CSK----SKLAV 413
Query: 440 KPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDN 499
F + +E+ V + C I L +S + + + L S L + + +
Sbjct: 414 FSFSSF-KEKVCALAVDVEKCSRILIDSLSDILLSNYNIEILNKLLSGLSHLEDRIKNSD 472
Query: 500 VVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSK 559
+ +EK F + SW V + +L++ R CL ++ + NS++ LP +
Sbjct: 473 ITQSGVEKEFGLASGIDFSWEEVGCN-VAELNEIRMTCLGLIEVVMNSIE---LPQLDDR 528
Query: 560 LVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHA 619
LE+FC + + + T S +L +++ ++ L++D+AAQ+KE + IPL + H
Sbjct: 529 KDLEEFCIRHSRIIICTPVCSSQLRELKLDTIDILLVDDAAQIKEIDMLIPLSFSP-RHI 587
Query: 620 VLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFY 679
V+ GD L MV+S++ EAG+ SLF+RL + L QY M PSIS F + FY
Sbjct: 588 VMFGDHLHLQPMVKSEVCKEAGYASSLFQRLMHSSSENKRLTKQYMMDPSISQFVSENFY 647
Query: 680 RNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQK 739
++ D + VKS Y K L Y F +I G E + + VE S ++ +LQ
Sbjct: 648 EGRLKDDSTVKSDDYNK-LLKEFPVPAYGFFDISGVDE--LTGKGKGFVESSVIMFLLQF 704
Query: 740 LYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIII 799
L K + K+++G++ Y ++ A+R +G +YEN D ++V S+ D++I
Sbjct: 705 LCKGRTNAIGKINVGIICLYNNRMDALRNLLGIKYENHDRINIEVNSLGNLHEKWYDVVI 764
Query: 800 ISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQC 859
+S+V + + ++NVA +R+R+CLWI+G + LI+SE +W L+ AK C
Sbjct: 765 LSSV----SDEKAELLEGSKMNVAFSRSRYCLWIIGEGKNLIASEDLWKKLIGYAKNLHC 820
>gi|218187407|gb|EEC69834.1| hypothetical protein OsI_00158 [Oryza sativa Indica Group]
Length = 1317
Score = 238 bits (608), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 215/844 (25%), Positives = 370/844 (43%), Gaps = 92/844 (10%)
Query: 31 VFSWSLEDIF-SQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAP 89
V SW+++DI K +V KIP F+ V +Y G + +LEET L+ L+ + +
Sbjct: 229 VLSWTIQDILLDDEAHKSKVVKIPTHFKGVDEYLGLYSQFILEETWSNLKVSLQNLTSSA 288
Query: 90 YAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLP-GDILVLADFKPEKV---S 145
Y + + G VD I Y+ GD+ + + P S
Sbjct: 289 YYDINNMLRCESSGV----FFVDINLKKIELKSTHSYRVAQDGDVFLFSSHPPHSHDFDS 344
Query: 146 DLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNK 205
L +G + T+ +KV + + F I+L NI+
Sbjct: 345 SLDFLGIAFNTSQCTSF---------HRGFKVLVSDQNCTLYCEENGKFGIFLINIMDAL 395
Query: 206 RIWNSLHMC---GNWKVITQVLGTDSVVDERCELCSVQRKGQWD-EKFGPSFSSTLNESQ 261
+ W+ ++ N I +L + C++C + +D EK S LN+ Q
Sbjct: 396 KAWSVFNLDKTEDNCSGIKSMLNLFEMAKTDCKMCDMS----FDYEKIKLSH---LNQQQ 448
Query: 262 VGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITE 321
+ ++ + + + C +ELI GPPG+GKT+ LL L + + L C P
Sbjct: 449 LYSLKSIISAVHCRSNKHIELIQGPPGSGKTEITIALLQVLHHMNLKVLLCAP------- 501
Query: 322 LASRVLKLVKESYKRDSRSNTPIC--PLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRE 379
+ ++K + +N C PL D L+ N D ++ F+ L +R +
Sbjct: 502 -KTNIVKFL---------TNLDKCLFPLEDALVLDNLDSTELAKEFQRHCLCHRSQDFLV 551
Query: 380 CFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQ--SEEKECRKETEGSKG 437
W +++L C + + R C+ N KE
Sbjct: 552 GITLFKKWLREMFVLLNLDPYCTEK----CDHEPTRIRCSTNSLLVFTLSSFKEKFTKLL 607
Query: 438 ERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQ 497
RK +L ++ERF + Y+S + ++ L SLL F +LL
Sbjct: 608 MRKEWLTNLKERFS------------------EIYLSADIANDITNLLSLLKDFEDLLCH 649
Query: 498 DNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTT 557
+ + K ++ F S + +L+ R +C+ ++ +SL LP
Sbjct: 650 ERLQDKRVQWTFGLS---SVPCKLGGNSAARKLNDLRLQCVDFIQRFRSSL---KLPKLE 703
Query: 558 SKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGIN 617
+ LEDFC K A + ST S+++LH ++P+N ++D+AA++ E + IPL+L +
Sbjct: 704 ERKSLEDFCIKHAKVIISTTQSTFRLHEAAMEPINLFIVDDAAKINECDLIIPLRLP-VT 762
Query: 618 HAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQ 677
H +++GD+ L SK+ + A F + F+RL +L KH+L QY +HPSI FPN +
Sbjct: 763 HILMLGDDFNLQP---SKVWENARFSMNPFKRLLNLGFRKHMLTEQYAIHPSIWQFPNEK 819
Query: 678 FYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKIL 737
FY +I +GA V S Y KQ+ G +F Y FI++ G SC+N +E+ A I+ +
Sbjct: 820 FYEGRITNGATVVSPEYNKQF-KGLKFPNYCFIDVTGTDGP----SCKNTIEL-ATIQYM 873
Query: 738 QKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDI 797
++ + + + +GV+ + V I+ +G +Y + V ++S D F+G +
Sbjct: 874 LEIISQGLEDTEVIDVGVLCLCGSNVGGIKSSLGKKYATHNKINVHIESADSFEGETYHL 933
Query: 798 IIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
+I+S + + I + +++N ALTRARHCLW+ G ++ + I+ LV D R
Sbjct: 934 VILSMLFKDENT----ILQIEKINAALTRARHCLWMFGEVDSVSNRGGIFAELVHDVIER 989
Query: 858 QCFF 861
+C
Sbjct: 990 KCIL 993
>gi|218187408|gb|EEC69835.1| hypothetical protein OsI_00159 [Oryza sativa Indica Group]
Length = 1186
Score = 238 bits (608), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 220/840 (26%), Positives = 380/840 (45%), Gaps = 85/840 (10%)
Query: 30 TVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAP 89
TV SW+++DI ++V+K+P F+ ++ Y L+EE R+ ++S L +
Sbjct: 204 TVLSWTIQDIL----LDNEVQKVPTKFKGLQHYLDVHSNLLMEEVRITIKSSLLKVETTQ 259
Query: 90 YAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRR 149
+ P + Y I++D + I N + GD+ L+ + R
Sbjct: 260 CFRDFVVSFAGP--PSIYYIDIDLY--GIDNC---QHVVKDGDLFFLS-------TQPLR 305
Query: 150 VGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWN 209
+ F T V D N+ + +K+ N + D + + +LTNI+ N I
Sbjct: 306 GQLSGCFGIATDVGCD---NQFQRSFKMLVSENQKNTD-LESIRYICFLTNIMDNLNISK 361
Query: 210 SL--HMCGNWKVITQVLGTDSVVDERC---ELCSVQRKGQWDEKFGPSFSSTL---NESQ 261
++ G +I ++ + + C ELC+ FG SS L NE Q
Sbjct: 362 AMVTMSSGRCGIINSIIRRNEKCKKTCACAELCA----------FGIEDSSYLEKYNEEQ 411
Query: 262 VGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITE 321
AM + ++ C H V+L+WGPPGTGKT+ + L + +L ++ R L C P I
Sbjct: 412 QCAMTCIMSKVGCHHNHSVDLVWGPPGTGKTRLAAGLAICMLNLRLRILVCVPKKRDI-H 470
Query: 322 LASRVLKLVKESYKRDSRSNTPICPLGDILL--FGNKDRLKVNPGFEEIYLNYRIKKLRE 379
+ + L+ V S+ D R G ++L N + +K F E+ L R + L
Sbjct: 471 IFLQSLQKVDPSF--DFR--------GIVVLNRLSNSESIKNCNKFHEMNLENRAQALYC 520
Query: 380 CFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGER 439
C + WR + +L Y ++ + + C + C K SK
Sbjct: 521 C---IFLWRSFVKELGFVL-----GLKPYCKEKCDHDGCTI-------CSK----SKLAV 561
Query: 440 KPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDN 499
F + +E+ + + C I L +S + + + L S L + + +
Sbjct: 562 FSFSSF-KEKVCALAIDVEKCSRILIDSLSDILLSNYNIEILNKLLSSLSHLEDRIKNSD 620
Query: 500 VVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSK 559
+ +EK F + SW V + +L++ R CL ++ + NS++ P +
Sbjct: 621 ITQSGVEKEFGLASGIDFSWEEVGCN-VAELNEIRMTCLGLIEVVMNSIE---FPQLDDR 676
Query: 560 LVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHA 619
LE+FC + + + T S +L +++ ++ L++D+AAQ+KE + IPL + H
Sbjct: 677 KDLEEFCIRHSRIIICTPVCSSQLRELKLDIIDILLVDDAAQIKEIDMLIPLSFSP-RHI 735
Query: 620 VLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFY 679
V+ GD L MV+S++ EAG+ SLF+RL + L QY M PSIS F + FY
Sbjct: 736 VMFGDHLHLQPMVKSEVCKEAGYASSLFQRLMHSSSENKRLTKQYMMDPSISQFVSENFY 795
Query: 680 RNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQK 739
++ D + VKS Y K L Y F +I G D + + VE S ++ +LQ
Sbjct: 796 EGRLEDDSTVKSDDYNK-LLKEFPVPAYGFFDISG--VDELTGKGKGFVESSVIMFLLQF 852
Query: 740 LYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIII 799
L K + K+++G++ Y ++ A+R +G +YE+ D ++V S+ D++I
Sbjct: 853 LCKGRTNAIGKINVGIICLYNNRMDALRNLLGIKYESHDRINIEVNSLGNLHEKWYDVVI 912
Query: 800 ISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQC 859
+S+V + + ++NVA +R+R+CLWI+G + LI+SE +W L+ AK C
Sbjct: 913 LSSV----SDEKAELLEGSKMNVAFSRSRYCLWIIGEGKNLIASEDLWKKLIGYAKNLHC 968
>gi|125570250|gb|EAZ11765.1| hypothetical protein OsJ_01634 [Oryza sativa Japonica Group]
Length = 1147
Score = 238 bits (606), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 216/852 (25%), Positives = 371/852 (43%), Gaps = 99/852 (11%)
Query: 26 FAGHTVFSWSLEDIF-SQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEA 84
+ V SW+++DI K +V KIP F+ V +Y G + +LEET L+ L+
Sbjct: 55 LSSEIVLSWTIQDILLDDEAHKSKVVKIPTHFKGVDEYLGLYSQFILEETWSNLKVSLQN 114
Query: 85 MRRAPYAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTL-PGDILVLA------ 137
+ + Y + + G VD I Y+ GD+ + +
Sbjct: 115 LTSSAYYDINNMLRCESSGV----FFVDINLKKIELKSTHSYRVAQDGDVFLFSSHPHSH 170
Query: 138 DFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIY 197
DF S L +G + T+ +KV + + F I+
Sbjct: 171 DFD----SSLDFLGIAFNTSQCTSF---------HRGFKVLVSDQNCTLYCEENGKFGIF 217
Query: 198 LTNILPNKRIWNSLHMC---GNWKVITQVLGTDSVVDERCELCSVQRKGQWD-EKFGPSF 253
L NI+ + W+ ++ N I +L + C++C + +D EK S
Sbjct: 218 LINIMDALKAWSVFNLDKTEDNCSGIKSMLNFSEMAKTDCKMCDMS----FDYEKIKLSH 273
Query: 254 SSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACT 313
LN+ Q+ ++ + + + C +ELI GPPG+GKT+ LL L + + L C
Sbjct: 274 ---LNQQQLYSLKSIISAVHCRSNKHIELIQGPPGSGKTEITIALLQVLHHMNLKVLLCA 330
Query: 314 PTNVAITELASRVLKLVKESYKRDSRSNTPIC--PLGDILLFGNKDRLKVNPGFEEIYLN 371
P + ++K + +N C PL D L+ N D ++ F+ + L
Sbjct: 331 P--------KTNIVKFL---------TNLDKCLFPLEDALVLDNLDSTELAKEFQRLCLC 373
Query: 372 YRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQ--SEEKECR 429
+R + W +++L C + + R C+ N
Sbjct: 374 HRSQDFLVGITLFKKWLREMFVLLNLDPYCTEK----CDHEPTRIRCSTNSLLVFTLSSF 429
Query: 430 KETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLD 489
KE RK +L ++ERF + Y+S + ++ L SLL
Sbjct: 430 KEKFTKLLMRKEWLTNLKERFS------------------EIYLSADIANDITNLLSLLK 471
Query: 490 SFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLD 549
F +LL + + K ++ F S + +L+ R + + ++ +SL
Sbjct: 472 DFEDLLCHERLQDKRVQWTFGLS---SVPCKLGGNSAARKLNDLRLQYVDFIQRFRSSL- 527
Query: 550 ELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTI 609
LP + LEDFC K A + ST S+++LH ++P+N ++D+AA++ E + I
Sbjct: 528 --KLPKLEERKSLEDFCIKHAKVIISTTQSTFRLHEAAMEPINLFIVDDAAKINECDLII 585
Query: 610 PLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPS 669
PL+L + H +++GD+ L SK+ + A F + F+RL +L KH+L QY +HPS
Sbjct: 586 PLRLP-VTHILMLGDDFNLQP---SKVWENARFSMNPFKRLLNLGFRKHMLTEQYAIHPS 641
Query: 670 ISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVE 729
I FPN +FY +I +GA V S Y KQ+ G +F Y FI++ G SC+N +E
Sbjct: 642 IWQFPNEKFYEGRITNGATVVSPEYNKQF-KGLKFPNYCFIDVTGTDGP----SCKNTIE 696
Query: 730 VSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDG 789
+ A I+ + K+ + + + +GV+ + V I+ +G +Y + V ++S D
Sbjct: 697 L-ATIQYMLKIISQGLEDTEVIDVGVLCLCGSYVGGIKSSLGKKYATHNKINVHIESADS 755
Query: 790 FQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGA 849
F+G ++I+S + + I + +++N ALTRARHCLW+ G ++ I+
Sbjct: 756 FEGETYHLVILSMLFKDENT----ILQIEKINAALTRARHCLWMFGEVDSVSDRGGIFAE 811
Query: 850 LVCDAKARQCFF 861
LV D R+C
Sbjct: 812 LVHDVIERKCIL 823
>gi|218195430|gb|EEC77857.1| hypothetical protein OsI_17113 [Oryza sativa Indica Group]
Length = 1127
Score = 236 bits (603), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 161/483 (33%), Positives = 244/483 (50%), Gaps = 63/483 (13%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
V W LED+ +++ FKD++++IP +F +K Y S+ PLLEE RM++ S LEA+ P
Sbjct: 24 VLGWKLEDVMNENLFKDKMKRIPSTFSDLKSYLESYTSPLLEEMRMEMSSSLEAISTMPS 83
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRV 150
++ E+ K + D +N+ + + E Y GDI++L+D KPE +SD+ R
Sbjct: 84 TKISWIEQKKNNKVYDIVFDADS-QNSKACNRPESYVPSVGDIIILSDVKPEHISDITRN 142
Query: 151 GRTWTFVSVTTVPDDEDENKKENRYKVKARNNM-----QVHDKTKKSFFFIYLTNILPNK 205
GR + V+ T DED++ +Y + + + + D+ + F YL NI+
Sbjct: 143 GRPY-IVAFVTEGGDEDDDSPPVKYVIISSGKIDSEDGKCQDRKEIKLFAAYLLNIVTYI 201
Query: 206 RIWNSLHMCGNWKVITQVLGTDSVVDERCE---LCSVQRKGQWD------EKFGPSFSST 256
RIW L T V S++ E + + +K + D E + +
Sbjct: 202 RIWRCLDYN------TAVRRNQSLIQEMVHYPLVADIVQKQKKDHSIDSMEIWSKLSTMD 255
Query: 257 LNESQVGAMLACLRRLDCGHRSGVE-LIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPT 315
LN SQ A+L C+ + + S LIWGPPGTGKTKT+S+LL + + TL C PT
Sbjct: 256 LNNSQNDAILNCISSMHSNNSSSSFSLIWGPPGTGKTKTISVLLWLMREMDHGTLTCAPT 315
Query: 316 NVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIK 375
N+A+ ++ASR LK++KES R C LGD+LL GNK R+ V+ +EIYL+ R++
Sbjct: 316 NLAVKQVASRFLKVIKESSDR-------AC-LGDVLLCGNKQRMCVDGNLKEIYLHDRVR 367
Query: 376 KLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGS 435
L CF P++GWRH SS+ DL E+ SQY Y+E KE
Sbjct: 368 TLLGCFVPMTGWRHRLSSLSDLFENGYSQYQKYLEDQKE--------------------- 406
Query: 436 KGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLL 495
G+ F Y R+RF LR C F +P ++ LKS L+S+ + L
Sbjct: 407 -GDSLTFYSYTRKRFNATYPELRRC-FKEMKRIPSTFSD---------LKSYLESYTSPL 455
Query: 496 FQD 498
++
Sbjct: 456 LEE 458
Score = 207 bits (528), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 136/382 (35%), Positives = 205/382 (53%), Gaps = 31/382 (8%)
Query: 48 QVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPYAQVIAFEELKPYGTNQY 107
++++IP +F +K Y S+ PLLEE RM++ S LEA+ P ++ E+ K
Sbjct: 433 EMKRIPSTFSDLKSYLESYTSPLLEEMRMEMSSSLEAISTMPSTKISWIEQKKNNKVYDI 492
Query: 108 GIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDED 167
+ D +N+ + + E Y GDI++L+D KPE +SD+ R GR + V+ T DED
Sbjct: 493 VFDADS-QNSKACNRPESYVPSVGDIIILSDVKPEHISDITRNGRPY-IVAFVTEGGDED 550
Query: 168 ENKKENRYKVKARNNM-----QVHDKTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQ 222
++ +Y + + + + D+ + F YL NI+ RIW L T
Sbjct: 551 DDSPPVKYVIISSGKIDSEDGKCQDRKEIKLFAAYLLNIVTYIRIWRCLDYN------TA 604
Query: 223 VLGTDSVVDERCE---LCSVQRKGQWD------EKFGPSFSSTLNESQVGAMLACLRRLD 273
V S++ E + + +K + D E + + LN SQ A+L C+ +
Sbjct: 605 VRRNQSLIQEMVHYPLVADIVQKQKKDHSIDSMEIWSKLSTMDLNNSQNDAILNCISSMH 664
Query: 274 CGHRSGVE-LIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKE 332
+ S LIWGPPGTGKTKT+S+LL + + TL C PTN+A+ ++ASR LK++KE
Sbjct: 665 SNNSSSSFSLIWGPPGTGKTKTISVLLWLMREMDHGTLTCAPTNLAVKQVASRFLKVIKE 724
Query: 333 SYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFAPLSGWRHCFS 392
S R C LGD+LL GNK R+ V+ +EIYL+ R++ L CF P++GWRH S
Sbjct: 725 SSDR-------AC-LGDVLLCGNKQRMCVDGNLKEIYLHDRVRTLLGCFVPMTGWRHRLS 776
Query: 393 SMIDLLEDCVSQYHIYVEKLKE 414
S+ DL E+ SQY Y+E KE
Sbjct: 777 SLSDLFENGYSQYQKYLEDQKE 798
Score = 161 bits (407), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/148 (54%), Positives = 109/148 (73%), Gaps = 6/148 (4%)
Query: 735 KILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGE 794
K L+ +A+ +K KV++GV+ PYTAQV+AI++K+G D VK+ S+DGFQGGE
Sbjct: 791 KYLEDQKEAYSKTKNKVTVGVICPYTAQVLAIQQKLG--KMKFDPVIVKINSVDGFQGGE 848
Query: 795 EDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDA 854
EDIII+STVR N+ G++GF+S QR NV+LTRAR+CLWILG+ TL S SIW LV DA
Sbjct: 849 EDIIILSTVRSNSDGAVGFLSNRQRTNVSLTRARYCLWILGNATTLSRSGSIWADLVRDA 908
Query: 855 KARQCFFNADEERN----LAKARLEVSK 878
K RQCFFNA+ +++ LAK ++E +K
Sbjct: 909 KDRQCFFNANSDKDISRVLAKHKIETNK 936
>gi|77552197|gb|ABA94994.1| hypothetical protein LOC_Os11g42910 [Oryza sativa Japonica Group]
Length = 1263
Score = 233 bits (594), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 216/847 (25%), Positives = 370/847 (43%), Gaps = 99/847 (11%)
Query: 31 VFSWSLEDIF-SQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAP 89
V SW+++DI K +V KIP F+ V +Y G + +LEET L+ L+ + +
Sbjct: 229 VLSWTIQDILLDDEAHKSKVVKIPTHFKGVDEYLGLYSQFILEETWSNLKVSLQNLTSSA 288
Query: 90 YAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTL-PGDILVLA------DFKPE 142
Y + + G VD I Y+ GD+ + + DF
Sbjct: 289 YYDINNMLRCESSGV----FFVDINLKKIELKSTHSYRVAQDGDVFLFSSHPHSHDFD-- 342
Query: 143 KVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNIL 202
S L +G + T+ +KV + + F I+L NI+
Sbjct: 343 --SSLDFLGIAFNTSQCTSF---------HRGFKVLVSDQNCTLYCEENGKFGIFLINIM 391
Query: 203 PNKRIWNSLHMC---GNWKVITQVLGTDSVVDERCELCSVQRKGQWD-EKFGPSFSSTLN 258
+ W+ ++ N I +L + C++C + +D EK S LN
Sbjct: 392 DALKAWSVFNLDKTEDNCSGIKSMLNFSEMAKTDCKMCDMS----FDYEKIKLSH---LN 444
Query: 259 ESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVA 318
+ Q+ ++ + + + C +ELI GPPG+GKT+ LL L + + L C P
Sbjct: 445 QQQLYSLKSIISAVHCRSNKHIELIQGPPGSGKTEITIALLQVLHHMNLKVLLCAP---- 500
Query: 319 ITELASRVLKLVKESYKRDSRSNTPIC--PLGDILLFGNKDRLKVNPGFEEIYLNYRIKK 376
+ ++K + +N C PL D L+ N D ++ F+ + L +R +
Sbjct: 501 ----KTNIVKFL---------TNLDKCLFPLEDALVLDNLDSTELAKEFQRLCLCHRSQD 547
Query: 377 LRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQ--SEEKECRKETEG 434
W +++L C + + R C+ N KE
Sbjct: 548 FLVGITLFKKWLREMFVLLNLDPYCTEK----CDHEPTRIRCSTNSLLVFTLSSFKEKFT 603
Query: 435 SKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNL 494
RK +L ++ERF + Y+S + ++ L SLL F +L
Sbjct: 604 KLLMRKEWLTNLKERFS------------------EIYLSADIANDITNLLSLLKDFEDL 645
Query: 495 LFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLP 554
L + + K ++ F S + +L+ R + + ++ +SL LP
Sbjct: 646 LCHERLQDKRVQWTFGLS---SVPCKLGGNSAARKLNDLRLQYVDFIQRFRSSL---KLP 699
Query: 555 CTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLA 614
+ LEDFC K A + ST S+++LH ++P+N ++D+AA++ E + IPL+L
Sbjct: 700 KLEERKSLEDFCIKHAKVIISTTQSTFRLHEAAMEPINLFIVDDAAKINECDLIIPLRLP 759
Query: 615 GINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFP 674
+ H +++GD+ L SK+ + A F + F+RL +L KH+L QY +HPSI FP
Sbjct: 760 -VTHILMLGDDFNLQP---SKVWENARFSMNPFKRLLNLGFRKHMLTEQYAIHPSIWQFP 815
Query: 675 NLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVI 734
N +FY +I +GA V S Y KQ+ G +F Y FI++ G SC+N +E+ A I
Sbjct: 816 NEKFYEGRITNGATVVSPEYNKQF-KGLKFPNYCFIDVTGTDGP----SCKNTIEL-ATI 869
Query: 735 KILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGE 794
+ + K+ + + + +GV+ + V I+ +G +Y + V ++S D F+G
Sbjct: 870 QYMLKIISQGLEDTEVIDVGVLCLCGSYVGGIKSSLGKKYATHNKINVHIESADSFEGET 929
Query: 795 EDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDA 854
++I+S + + I + +++N ALTRARHCLW+ G ++ I+ LV D
Sbjct: 930 YHLVILSMLFKDENT----ILQIEKINAALTRARHCLWMFGEVDSVSDRGGIFAELVHDV 985
Query: 855 KARQCFF 861
R+C
Sbjct: 986 IERKCIL 992
>gi|224099649|ref|XP_002311565.1| predicted protein [Populus trichocarpa]
gi|222851385|gb|EEE88932.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 228 bits (580), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 155/230 (67%), Gaps = 8/230 (3%)
Query: 1 MKQESQSEEMMEGKGCSSSSKKAVGFAGHTVFSWSLEDIFSQSFFKDQVEKIPESFQSVK 60
M++ S +MM+ K + GF T+FSWSLEDIF+++ FK VE IPES+ SV+
Sbjct: 2 MERSESSSKMMKKKEIPNDR----GFV-DTIFSWSLEDIFNENLFK--VENIPESYYSVE 54
Query: 61 QYFGSFVFPLLEETRMQLRSGLEAMRRAPYAQVIAFEELKPYGTNQYGIEVDYWRNTISN 120
Y GS+V PLLEETR QL S ++ + RAP+A+++AF E KP+GT Y + +DYWRN
Sbjct: 55 HYLGSYVIPLLEETRAQLSSSMDIISRAPFAEMVAFFEAKPHGTLLYDVNIDYWRNRSRG 114
Query: 121 SGKEPYKTLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKE-NRYKVKA 179
SG E YKTLPGDI++L KPE VSDL+RVG TWTF VT + DE E+ + VKA
Sbjct: 115 SGNEHYKTLPGDIVILTSAKPENVSDLQRVGWTWTFAVVTRITGDETEDAATYTSFTVKA 174
Query: 180 RNNMQVHDKTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSV 229
+ ++++ D +KS I LTNI +KRIWN+LHM GN +I ++L TDSV
Sbjct: 175 QKDIEISDGLQKSLTVISLTNITTSKRIWNALHMFGNLNIIKEILCTDSV 224
>gi|115447959|ref|NP_001047759.1| Os02g0684200 [Oryza sativa Japonica Group]
gi|50251935|dbj|BAD27871.1| tRNA-splicing endonuclease positive effector-like [Oryza sativa
Japonica Group]
gi|113537290|dbj|BAF09673.1| Os02g0684200 [Oryza sativa Japonica Group]
Length = 462
Score = 213 bits (543), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 142/390 (36%), Positives = 204/390 (52%), Gaps = 18/390 (4%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
+FSWSL+D+ ++ K +V+KIP F S+K+Y GSF PL+EETR L S LE ++ AP
Sbjct: 43 MFSWSLKDVLNKDLLKKKVKKIPTIFSSLKEYMGSFTVPLIEETRADLCSALEGIKHAPA 102
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRV 150
A+V +K Q + + +E Y D L+L D KP +SDL R
Sbjct: 103 AEVT---RIKLCSDEQLIYSFFANKADPKDIFQEVYAPKEADTLLLTDRKPRHISDLGRG 159
Query: 151 GRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWNS 210
+ SV D E N + +++ + S F ++L N+ RIW+
Sbjct: 160 EKPLVIASVLKAEDAEG-----NTVVRLSSKHVEQQFGLESSLFAVFLINMTTYNRIWSE 214
Query: 211 LHMC----GNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAML 266
L N +I ++ + V + C S D G LN+SQ A+L
Sbjct: 215 LDAVVASVRNTDIIRMIVNCNPKVGQECSYSSELPLHLPDRALGGLEDFKLNKSQKVAVL 274
Query: 267 ACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRV 326
C+ + S V LIWGPPGTGKTKT+S LL +L RTL C PTN A+ E+ASRV
Sbjct: 275 DCVSAMQ-QRSSSVRLIWGPPGTGKTKTISTLLWAMLVKNHRTLTCAPTNTAVVEVASRV 333
Query: 327 LKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFAPLSG 386
L L+++ S + C L D++LFGN+DR+ V+ +I+L R ++L++C +P SG
Sbjct: 334 LNLLEDP----SAGSGKACFLSDVVLFGNEDRMNVDGNLTKIFLEKRARRLQKCLSPGSG 389
Query: 387 WRHCFSSMIDLLEDCVSQYHIYVEKLKERE 416
W H SSMI +LE + QY YVE++ ERE
Sbjct: 390 WVHSLSSMIRILEQPLVQYDSYVEQI-ERE 418
>gi|414884578|tpg|DAA60592.1| TPA: hypothetical protein ZEAMMB73_434278 [Zea mays]
Length = 723
Score = 213 bits (542), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 148/394 (37%), Positives = 209/394 (53%), Gaps = 47/394 (11%)
Query: 280 VELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSR 339
V LIWG GKTKT+S LL ++L RT+ C PTN A+ E+ASRVL +++ES +
Sbjct: 192 VRLIWGL-RDGKTKTISALLWSMLIENQRTVTCAPTNTAVAEVASRVLGVIEESGGGGAA 250
Query: 340 SNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLE 399
+ C GD++LFGN+DR+ V+ E I+L+ R+++LR+C P++GW SSMI L E
Sbjct: 251 TK---CFFGDVVLFGNEDRMAVDRKLENIFLDTRVRRLRQCLMPITGWTKSLSSMIALQE 307
Query: 400 DCVSQYHIYVE-----------------------KLKEREDCNVNQSEEK--ECRKETEG 434
D + Y Y E L+ +D V + ++ E +K+
Sbjct: 308 DPMVPYERYDEAIQGCVLDLVSEEIKLRNVIVVCSLRTMDDKKVKEIQKDLLEVQKKARE 367
Query: 435 SKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNL 494
+ E+ F Y + +K LR C+ F LP+S SE +F M + LLD+FG L
Sbjct: 368 VEREKISFETYFQSNYKKLAKDLRTCVETFVDDLPRSATSEENFCCMAEVLLLLDAFGVL 427
Query: 495 LFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLP 554
+ + V ++L+ LF D VR R L + S CL R LW LP
Sbjct: 428 VQSEPV--EQLQALFKRHSD-------VRFR----LREAISSCL---RKLWLLSSNFKLP 471
Query: 555 -CTTSKLVLEDFCFKRASLFFSTASSSYKL-HSVEIKPLNFLVIDEAAQLKESESTIPLQ 612
S+ + +F + A + TASSSY+L + + +PL V+DEAAQLKE ES IPLQ
Sbjct: 472 EMYDSRTIDLEFLLQNAKIVLCTASSSYRLLYMQKAQPLEVPVVDEAAQLKECESLIPLQ 531
Query: 613 LAGINHAVLIGDECQLPAMVESKISDEAGFGRSL 646
L G+ HAVLI DE LPA+V+SK D G G +L
Sbjct: 532 LPGVRHAVLIDDEYLLPALVKSKEGDPPGSGVAL 565
Score = 84.7 bits (208), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 81/156 (51%), Gaps = 15/156 (9%)
Query: 740 LYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFE-YENKDG-FTVKVKSIDGFQGGEEDI 797
L A V SK+ G AI +K+G + Y DG F+VKV+++DGFQG EED+
Sbjct: 546 LLPALVKSKEGDPPGSGVALQGPGPAIEEKLGKQVYSMHDGSFSVKVRTVDGFQGAEEDV 605
Query: 798 IIISTVRCNTGGSIGFISKPQRVNVALTRARHC-----LWIL--------GSERTLISSE 844
II STVR NT G IGF++ R NVALTRA +W + G +
Sbjct: 606 IIFSTVRSNTAGKIGFLADTNRTNVALTRANALDDDVFVWYVLQTLPVDPGQREDAGERQ 665
Query: 845 SIWGALVCDAKARQCFFNADEERNLAKARLEVSKEL 880
+ A K R CF +A ++++LA A ++ S EL
Sbjct: 666 NDMAADRGRRKERGCFLDAKDDQDLACAIIKASIEL 701
>gi|218195431|gb|EEC77858.1| hypothetical protein OsI_17114 [Oryza sativa Indica Group]
Length = 955
Score = 204 bits (518), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 156/505 (30%), Positives = 235/505 (46%), Gaps = 68/505 (13%)
Query: 29 HTVFSWSLEDIFSQSFFKDQVEKI------------PESFQSVKQYFGSFVFPLLEETRM 76
+T+FSW+LED+ +Q+ F D+V I P+ F +K Y SF LLEE R
Sbjct: 305 NTIFSWTLEDVMNQNLFADKVPSISFVFSIRLVNAIPDRFSGLKSYLDSFRALLLEEIRA 364
Query: 77 QLRSGLEAM-RRAPYAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILV 135
++ S LE + + + I P G Q +R TIS+ + GDI+V
Sbjct: 365 EMSSNLETLPNNSSSTKHIQSLVRVPTGLRQ----CPLYRVTISDQ-RGACAPCIGDIVV 419
Query: 136 LADFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFF 195
L D P + SDL GR+ V V NR R ++ D +F
Sbjct: 420 LTDTVPRRPSDLASNGRSCCLAHVKDV---------VNRRTFLIRAAKKIGDADSYAFAA 470
Query: 196 IYLTNILPNKRIWNSLH----MCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFG- 250
L +P RIW L + N ++ V G + G DE
Sbjct: 471 SLLA-FIPYARIWRCLDYDYALKINPPLVMAVAGVALTTSLAGSSSFHRANGGTDEITSR 529
Query: 251 -PSFSSTLNESQVGAMLACLRRLDCGHRSGVE----LIWGPPGTGKTKTVSMLLLTLLRI 305
P+F LN+SQ GA+ +C+ + S LIWGPPGTGKTKT+S+LLL L+
Sbjct: 530 LPAFG--LNDSQAGAIQSCVSAVQGNGASTTSGRFSLIWGPPGTGKTKTISVLLLMLMTT 587
Query: 306 -----KCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLK 360
+ R L C PTN AI+++ASR+L L K+ + + +C GD+LLFGNKDR+
Sbjct: 588 ATSQSRYRVLTCAPTNTAISQVASRLLALSKQ---HSAAAAGGLCH-GDLLLFGNKDRMG 643
Query: 361 VNPGFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNV 420
++ +E++L+ R+K L++CF+P SGWRH SS+ L ++ Y++ +D
Sbjct: 644 IDGDLKEVFLDNRVKILQKCFSPESGWRHGLSSLQVFLSFPLALRCQYIQACIALKD--- 700
Query: 421 NQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQE 480
G P +VR RF L C +H+PKS I E ++
Sbjct: 701 ----------------GTALPESSFVRSRFHDICQKLSRCFQTILSHVPKSVILEKNYNN 744
Query: 481 MVALKSLLDSFGNLLFQDNVVSKEL 505
++ L ++L++F LL +++ E+
Sbjct: 745 IILLTTMLENFRKLLSKNSAAGDEV 769
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/254 (35%), Positives = 137/254 (53%), Gaps = 34/254 (13%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVE----LIWGPPGTGKTKTVSMLLLTLLRI- 305
P+F LN+SQ GA+ +C+ + S LIWGPPGTGKTKT+S+LLL L+
Sbjct: 49 PAFG--LNDSQAGAIQSCVSAVQGNGASTTSGRFSLIWGPPGTGKTKTISVLLLMLMTTA 106
Query: 306 ----KCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKV 361
+ R L C PTN AI+++ASR+L L K+ + + +C GD+LLFGNKDR+ +
Sbjct: 107 TSQSRYRVLTCAPTNTAISQVASRLLALSKQ---HSAAAAGGLCH-GDLLLFGNKDRMGI 162
Query: 362 NPGFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVN 421
+ +E++L+ R+K L++CF+P SGWRH SS+ L ++ Y++ +D
Sbjct: 163 DGDLKEVFLDNRVKILQKCFSPESGWRHGLSSLQVFLSFPLALRCQYIQACIALKD---- 218
Query: 422 QSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEM 481
G P +VR RF L C +H+PKS I E ++ +
Sbjct: 219 ---------------GTALPESSFVRSRFHDICQKLSRCFQTILSHVPKSVILEKNYNNI 263
Query: 482 VALKSLLDSFGNLL 495
+ L ++L++F LL
Sbjct: 264 ILLTTMLENFRKLL 277
Score = 143 bits (361), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 77/168 (45%), Positives = 101/168 (60%), Gaps = 22/168 (13%)
Query: 743 AWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIIST 802
A VG+ + VS+G++ PY AQV AI+ G + V+V S+DGFQG EEDIII+ST
Sbjct: 785 ACVGTGEGVSVGIICPYAAQVEAIQS--GIDANALRPLDVRVNSVDGFQGSEEDIIILST 842
Query: 803 VRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFN 862
VR N+ GSIGF+S +R NVALTRARHCLWILG TL+ S S+WG LV DA R+CF++
Sbjct: 843 VRSNSTGSIGFLSNRRRANVALTRARHCLWILGDAATLLGSGSVWGELVRDAVDRRCFYD 902
Query: 863 ADEERNLAKARLEVSKELVEIGAESLTSTSQGGKKEEFE--FEFVKAF 908
D+ G L ++ G ++E + EF AF
Sbjct: 903 WDD------------------GGAGLLGVARRGHEDELDDAVEFATAF 932
>gi|218195422|gb|EEC77849.1| hypothetical protein OsI_17103 [Oryza sativa Indica Group]
Length = 534
Score = 203 bits (516), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 156/505 (30%), Positives = 236/505 (46%), Gaps = 68/505 (13%)
Query: 29 HTVFSWSLEDIFSQSFFKDQVEKI------------PESFQSVKQYFGSFVFPLLEETRM 76
+T+FSW+LED+ +Q+ F D+V I P+ F +K Y SF LLEE R
Sbjct: 22 NTIFSWTLEDVMNQNLFADKVPSISFVFSIRLVNAIPDRFSGLKSYLDSFRALLLEEIRA 81
Query: 77 QLRSGLEAM-RRAPYAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILV 135
++ S LE + + + I P G Q + +R TIS+ + GDI+V
Sbjct: 82 EMSSNLETLPNNSSSTKHIQSLVRVPTGLRQCPL----YRVTISDQ-RGACAPCIGDIVV 136
Query: 136 LADFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFF 195
L D P + SDL GR+ V V NR R ++ D +F
Sbjct: 137 LTDTVPRRPSDLASNGRSCCLAHVKDV---------VNRRTFLIRAAKKIGDADSYAFAA 187
Query: 196 IYLTNILPNKRIWNSLH----MCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFG- 250
L +P RIW L + N ++ V G + G DE
Sbjct: 188 SLLA-FIPYARIWRCLDYDYALKINPPLVMAVAGVALTTSLAGSSSFHRANGGTDEITSR 246
Query: 251 -PSFSSTLNESQVGAMLACLRRLDCGHRSGVE----LIWGPPGTGKTKTVSMLLLTLLRI 305
P+F LN+SQ GA+ +C+ + S LIWGPPGTGKTKT+S+LLL L+
Sbjct: 247 LPAFG--LNDSQAGAIQSCVSAVQGNGASTTSGRFSLIWGPPGTGKTKTISVLLLMLMTT 304
Query: 306 -----KCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLK 360
+ R L C PTN AI+++ASR+L L K+ + + +C GD+LLFGNKDR+
Sbjct: 305 ATSQSRYRVLTCAPTNTAISQVASRLLALSKQ---HSAAAAGGLCH-GDLLLFGNKDRMG 360
Query: 361 VNPGFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNV 420
++ +E++L+ R+K L++CF+P SGWRH SS+ L ++ Y++ +D
Sbjct: 361 IDGDLKEVFLDNRVKILQKCFSPESGWRHGLSSLQVFLSFPLALRCQYIQACIALKD--- 417
Query: 421 NQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQE 480
G P +VR RF L C +H+PKS I E ++
Sbjct: 418 ----------------GTALPESSFVRSRFHDICQKLSRCFQTILSHVPKSVILEKNYNN 461
Query: 481 MVALKSLLDSFGNLLFQDNVVSKEL 505
++ L ++L++F LL +++ E+
Sbjct: 462 IILLTTMLENFRKLLSKNSAAGDEV 486
>gi|218191370|gb|EEC73797.1| hypothetical protein OsI_08494 [Oryza sativa Indica Group]
Length = 401
Score = 201 bits (510), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 136/377 (36%), Positives = 194/377 (51%), Gaps = 21/377 (5%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
+FSWSL+D+ ++ K +V+KIP F S+K+Y GSF PL+EETR L S LE ++ AP
Sbjct: 43 MFSWSLKDVLNKDLLKKKVKKIPTIFSSLKEYMGSFTVPLIEETRADLCSALEGIKHAPA 102
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRV 150
A+V +K Q + + +E Y D L+L D KP +SDL R
Sbjct: 103 AEVT---RIKLCSDEQLIYSFFAKKADPKDIFQEVYAPKEADTLLLTDRKPRHISDLGRG 159
Query: 151 GRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWNS 210
+ SV D E N + +++ + S F ++L N+ RIW+
Sbjct: 160 EKPLVIASVLKAEDAEG-----NTVVRLSSKHVEQQFGLESSLFAVFLINMTTYNRIWSE 214
Query: 211 LHMCGNWKVITQVLGTD---SVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLA 267
L V+ V TD +V + C S D G LN+SQ A+L
Sbjct: 215 LD-----AVVASVRNTDIIRMIVGQECSYSSELPLHLPDRALGGLEDFKLNKSQKVAVLD 269
Query: 268 CLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVL 327
C+ + S V LIWGPPG GKTKT+S LL +L RTL C PTN A+ E+ASRVL
Sbjct: 270 CVSAMQ-QRSSSVRLIWGPPGRGKTKTISTLLWAMLVKNHRTLTCAPTNTAVVEVASRVL 328
Query: 328 KLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFAPLSGW 387
L+++ S + C L D++LFGN+DR+ V+ +I+L R ++L++C +P SGW
Sbjct: 329 NLLEDP----SAGSGKACFLSDVVLFGNEDRMNVDGNLTKIFLEKRARRLQKCLSPGSGW 384
Query: 388 RHCFSSMIDLLEDCVSQ 404
H SSMI +LE + Q
Sbjct: 385 VHSLSSMIRILEQPLVQ 401
>gi|331213013|ref|XP_003307776.1| hypothetical protein PGTG_00726 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309298179|gb|EFP74770.1| hypothetical protein PGTG_00726 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 2157
Score = 198 bits (503), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/373 (34%), Positives = 204/373 (54%), Gaps = 23/373 (6%)
Query: 553 LPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIP 610
L T KL ++ + A + ST S S + ++ P +F +VIDEA Q E S IP
Sbjct: 1636 LDAATRKLRMQ--ILQDADVVCSTLSGSGHDYMSQL-PFDFETVVIDEACQCVEPASLIP 1692
Query: 611 LQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT-SLNHSKHLLNIQYRMHPS 669
L+ +L+GD QLP V S+ + +AG+ +SLF R+ + HLL+IQYRMHPS
Sbjct: 1693 LRY-NATQCILVGDPMQLPPTVLSQTASQAGYDQSLFVRMQRNAPDVAHLLSIQYRMHPS 1751
Query: 670 ISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRED-FIYHSCRNIV 728
IS FP+ FY +++LDG ++SK+ + + +G+ F Y+F + +G RE+ +HS N
Sbjct: 1752 ISTFPSKAFYDSKLLDGPEMESKAVQPWHQSGSLFPPYAFYHPVGAREERGAHHSLMNRT 1811
Query: 729 EVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSID 788
E S + I ++ + +G+++ Y AQV IR+++ ++ + V ++D
Sbjct: 1812 EASLAVSIYWRIANDYPHIDFAYRVGIITGYAAQVGEIRRQLRAKFPASTVAAIDVNTVD 1871
Query: 789 GFQGGEEDIIIISTVRC-----NTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISS 843
GFQG E+DIII+S VR N+GG IGF+ +R+NVALTRA+ ++I+G+ R ++S
Sbjct: 1872 GFQGQEKDIIILSCVRGGRDDNNSGGGIGFLKDIRRMNVALTRAKSSMFIIGN-RAVLSQ 1930
Query: 844 ESIWGALVCDAKAR--------QCFFNADEERNLAKAR-LEVSKELVEIGAESLTSTSQG 894
+ W ALV DA R Q F++ +++AR S + + L + Q
Sbjct: 1931 DPTWKALVEDAAGRSLISEVTSQTFYSTSSAPIVSRARQTSDSGGMKKPAVGVLMTPKQA 1990
Query: 895 GKKEEFEFEFVKA 907
++ + E KA
Sbjct: 1991 AEQSQVRGEIAKA 2003
>gi|224135133|ref|XP_002327574.1| predicted protein [Populus trichocarpa]
gi|222836128|gb|EEE74549.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 194 bits (494), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/207 (49%), Positives = 146/207 (70%), Gaps = 2/207 (0%)
Query: 704 FGTYSFINIIGGREDFIYH-SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ 762
+G YSFIN+ G+E+F S +N+VEV+ V +++ L+K + +++++S+GV+SPY AQ
Sbjct: 2 YGPYSFINVASGKEEFDNGGSKKNLVEVAVVSEVVASLFKEFTRARKRMSVGVISPYNAQ 61
Query: 763 VVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNV 822
V AI++KIG Y F V ++S+DGFQGGEED+IIISTVRCN G IGF++ QRVNV
Sbjct: 62 VYAIQEKIGKTYSAHSDFAVNIRSVDGFQGGEEDVIIISTVRCNANGKIGFLADRQRVNV 121
Query: 823 ALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVE 882
ALTRARHCLWILG+ TL++S+SIW LV DAK R CF+N +E+++L+KA + EL +
Sbjct: 122 ALTRARHCLWILGNGATLVNSDSIWKKLVTDAKERGCFYNVEEDKSLSKAITDAFLELDQ 181
Query: 883 IGAESLTSTSQGGKKEEFEFEFVKAFR 909
+ A L S + ++F F FR
Sbjct: 182 LDA-LLNVNSPLFRNARWKFCFSNDFR 207
>gi|212723756|ref|NP_001131829.1| uncharacterized protein LOC100193203 [Zea mays]
gi|194692656|gb|ACF80412.1| unknown [Zea mays]
Length = 346
Score = 192 bits (487), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/357 (36%), Positives = 189/357 (52%), Gaps = 46/357 (12%)
Query: 308 RTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEE 367
RT+ C PTN A+ E+ASRVL +++ES + + C GD++LFGN+DR+ V+ E
Sbjct: 7 RTVTCAPTNTAVAEVASRVLGVIEESSGGGAATK---CFFGDVVLFGNEDRMAVDRKLEN 63
Query: 368 IYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVE----------------- 410
I+L+ R+++LR+C P++GW SSMI L ED + Y Y E
Sbjct: 64 IFLDTRVRRLRQCLMPITGWTKSLSSMIALQEDSMVPYERYDEAIQGCVLDLVSEEIKLR 123
Query: 411 ------KLKEREDCNVNQSEEK--ECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIF 462
L+ +D V + ++ E +K+ + E+ F Y + +K LR C+
Sbjct: 124 NVTVVCSLRTMDDKKVKEMQKDLLEVQKKAREVEREKMSFETYFQSNYKKLAKDLRTCVE 183
Query: 463 IFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFV 522
F LP+S SE +F M + LLD+FG L+ + V ++L+ LF D V
Sbjct: 184 TFVDDLPRSATSEENFCCMAEVLLLLDAFGVLVQSEPV--EQLQALFKRHSD-------V 234
Query: 523 RKRYLLQLHQRRSECLSVLRNLWNSLDELNLP-CTTSKLVLEDFCFKRASLFFSTASSSY 581
R R L + S C LR LW LP S+ + +F + A + TASSSY
Sbjct: 235 RFR----LREAISSC---LRKLWLLSSNFKLPEMYDSRTIDLEFLLQNAKIVLCTASSSY 287
Query: 582 K-LHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKIS 637
+ L+ + +PL V+DEAAQLKE ES IPLQL G+ HAVLI DE LPA+V+SK++
Sbjct: 288 RLLYMQKAQPLEVPVVDEAAQLKECESLIPLQLPGVRHAVLIDDEYLLPALVKSKLN 344
>gi|357140222|ref|XP_003571669.1| PREDICTED: uncharacterized protein LOC100842761 [Brachypodium
distachyon]
Length = 1452
Score = 191 bits (485), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 121/309 (39%), Positives = 174/309 (56%), Gaps = 12/309 (3%)
Query: 562 LEDFCFKRASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAV 620
LE A + F+T SSS +L S + +VIDEAAQ E PL L G V
Sbjct: 957 LEASFANEAEIVFTTVSSSGRRLFSRLSHGFDMVVIDEAAQASEVGVLPPLAL-GAARCV 1015
Query: 621 LIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYR 680
L+GD QLPA V SK + + RSLFER LL++QYRMHP I FP+ FY+
Sbjct: 1016 LVGDPQQLPATVISKAAGTLLYSRSLFERFQQAGCPTILLSVQYRMHPQIREFPSRYFYQ 1075
Query: 681 NQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSC--RNIVEVSAVIKI-- 736
++ D +V K ++ Y Y F +I GRE S +N+ E +++
Sbjct: 1076 GRLTDSESV-VKLPDEAYYRDALMSPYIFYDISHGRESHRGGSSSYQNVHEAQFALRLYE 1134
Query: 737 -LQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEE 795
LQKL KA G +KVS+G+++PY Q+ ++++ ++G + + ++D FQG E
Sbjct: 1135 HLQKLMKANGG--KKVSVGIITPYKLQLKCLQREFEEVMNTEEGKDIYINTVDAFQGQER 1192
Query: 796 DIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAK 855
D+II+S VR + G +GF++ +R+NVALTRAR LW++G+ L+ SE W ALV DAK
Sbjct: 1193 DVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVVGNANALMQSED-WAALVTDAK 1250
Query: 856 ARQCFFNAD 864
AR+CF + D
Sbjct: 1251 ARKCFMDLD 1259
>gi|253757764|ref|XP_002488861.1| hypothetical protein SORBIDRAFT_3241s002010 [Sorghum bicolor]
gi|241947324|gb|EES20469.1| hypothetical protein SORBIDRAFT_3241s002010 [Sorghum bicolor]
Length = 403
Score = 191 bits (485), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 132/393 (33%), Positives = 198/393 (50%), Gaps = 52/393 (13%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTN 316
LN SQ+ A+ C+ +D + S ++L+WGPPGTGKTKT+S +L +L RTLAC PTN
Sbjct: 33 LNNSQLNAVADCVATMD-NNSSSIKLLWGPPGTGKTKTISSILWAMLIKGRRTLACAPTN 91
Query: 317 VAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPG--FEEIYLNYRI 374
A+ E+ +R+ KL+ ES L DI+LFGNK LK++ G ++YLN R
Sbjct: 92 TAVLEIVARIAKLIVESSDGSVF-------LNDIVLFGNKKNLKIDDGNYLSKVYLNSRA 144
Query: 375 KKLRECFAPLS--GWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKET 432
++L CF S GWRHC S IDLL + V+ Y +
Sbjct: 145 ERLLPCFMSKSNTGWRHCLCSFIDLLVNSVTMYQL------------------------- 179
Query: 433 EGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFG 492
E K F +Y++ + +LR+ + + P++ + SFQ M+ + L+
Sbjct: 180 ---NNEGKTFKQYLKHDYNKLSRNLRSYLTMLYNDHPRNLETGQSFQCMLEVLELIKILH 236
Query: 493 NLLFQDNVVSKELEKLFSHSVDEGIS---W----AFVRKRYL--LQLHQRRSECLSVLRN 543
L+ N +L +++E ++ W A +R + RS C+ L
Sbjct: 237 ALINVSNGGDLWSNELLESTIEEEVNPELWPSQLASIRTNSCNKSKFVAARSLCVQELIY 296
Query: 544 LWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLK 603
L +L+ LP + ++ + R T SS++L+ V + PL L+IDEAAQLK
Sbjct: 297 LRMNLE---LPDCNNTRDVQLYLLSRTRCIICTVCSSFRLYDVPMIPLELLIIDEAAQLK 353
Query: 604 ESESTIPLQLAGINHAVLIGDECQLPAMVESKI 636
E E+ +PLQL GI H V IGDE QLPA+V+ +
Sbjct: 354 ECETLVPLQLPGIRHVVFIGDEYQLPALVKKTV 386
>gi|357513937|ref|XP_003627257.1| Helicase sen1 [Medicago truncatula]
gi|355521279|gb|AET01733.1| Helicase sen1 [Medicago truncatula]
Length = 1516
Score = 189 bits (480), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 187/661 (28%), Positives = 294/661 (44%), Gaps = 94/661 (14%)
Query: 240 QRKGQWDEKFGPSFSS----TLNESQVGAMLACLRRLDCGHRS---------GVELIWGP 286
Q+ E F P+F+ T NE Q+ A+ G S L+ GP
Sbjct: 734 QQTPAMPECFTPNFTEYLRRTFNEPQLAAIQWAAMHTAAGTSSVATKRQEPWPFTLVQGP 793
Query: 287 PGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICP 346
PGTGKT TV +L + ++ + S + + ESYK+ + N+ P
Sbjct: 794 PGTGKTHTVWGMLNVIHLVQYQHY-----------YTSLLKHVAPESYKQANELNSDNAP 842
Query: 347 LG---DILLFGNKDRLKVNPGFEEIYLNYRIKKLRE--CFAPLSGWRHCFSSMID--LLE 399
G ++L +++ L+ P + K R C + S ++D ++
Sbjct: 843 TGSIDEVLQNMDQNLLRTLPKL--------VPKPRMLVCAPSNAATDELLSRVLDRGFID 894
Query: 400 DCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRN 459
+ Y V ++ Q+ E R E L RE + LRN
Sbjct: 895 GEMKVYRPDVARVGVDSQTRAAQAVSVERRTEQ---------LLVKTREEVMGWMQQLRN 945
Query: 460 -----CIFIFCTHLPKSYISENSFQEMVALKSLLDSFGN-------LLFQDNVVSKELEK 507
+ C H +E+ A + + S G+ L+ +D L+
Sbjct: 946 REAQYTQQLHCLH-----------RELNATAAAVRSQGSVGVDPDLLMARDQNRDVLLQN 994
Query: 508 LFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCF 567
L S V EG R + L+++ + L+VL + NL ++ LE
Sbjct: 995 LAS--VVEG------RDKVLVEMSR-----LAVLEGRFRPGSGFNL--EEARASLEASFA 1039
Query: 568 KRASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDEC 626
A + F+T SSS KL S + +VIDEAAQ E PL L G VL+GD
Sbjct: 1040 NEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVGVLPPLSL-GAARCVLVGDPQ 1098
Query: 627 QLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG 686
QLPA V SK + + RSLFER LL++QYRMHP I FP+ FY+ ++ D
Sbjct: 1099 QLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFPSRYFYQGRLSDS 1158
Query: 687 ANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSC--RNIVEVSAVIKILQKLYKAW 744
+V K ++ Y Y F +I GRE S +NI E +++ + + K
Sbjct: 1159 ESV-IKLPDEAYYKDPLLRPYIFYDIRHGRESHRGGSVSYQNIHEAQFCLRLYEHIQKTV 1217
Query: 745 VG-SKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTV 803
K+S+G+++PY Q+ ++++ +++G + + ++D FQG E D+II+S V
Sbjct: 1218 KSLGLPKISVGIITPYKLQLKCLQREFEEVLNSEEGKDIYINTVDAFQGQERDVIIMSCV 1277
Query: 804 RCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
R +T G +GF++ +R+NVALTRAR LW++G+ LI SE W AL+ DA++R C+ +
Sbjct: 1278 RASTHG-VGFVADIRRMNVALTRARRALWVMGNANALIQSED-WAALIADARSRNCYMDM 1335
Query: 864 D 864
D
Sbjct: 1336 D 1336
>gi|16924040|gb|AAL31652.1|AC079179_7 Putative DNA2-NAM7 helicase family protein [Oryza sativa]
gi|125573854|gb|EAZ15138.1| hypothetical protein OsJ_30554 [Oryza sativa Japonica Group]
Length = 1468
Score = 189 bits (480), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/313 (38%), Positives = 174/313 (55%), Gaps = 12/313 (3%)
Query: 558 SKLVLEDFCFKRASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGI 616
++ LE A + F+T SSS KL S + +VIDEAAQ E PL L G
Sbjct: 956 ARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAVLPPLSL-GA 1014
Query: 617 NHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNL 676
VL+GD QLPA V SK + + RSLFER LL++QYRMHP I FP+
Sbjct: 1015 ARCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQLSGCPTILLSVQYRMHPQIREFPSR 1074
Query: 677 QFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSC--RNIVEVSAVI 734
FY+ ++ D +V K ++ Y Y F +I GRE S +N+ E V+
Sbjct: 1075 HFYQGRLTDSESV-VKLPDEAYYRDALMAPYIFYDISHGRESHRGGSSSYQNVHEAQFVL 1133
Query: 735 KI---LQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQ 791
++ LQK +A G +K S+G+++PY Q+ ++++ +DG + + ++D FQ
Sbjct: 1134 RLYENLQKFLRANGG--KKASVGIITPYKLQLKCLQREFEEVMSTEDGKDIYINTVDAFQ 1191
Query: 792 GGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
G E D+II+S VR + G +GF++ +R+NVALTRAR LW++G+ L+ SE W L+
Sbjct: 1192 GQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVVGNAGALMQSED-WALLI 1249
Query: 852 CDAKARQCFFNAD 864
DAKAR+CF + D
Sbjct: 1250 ADAKARKCFMDLD 1262
>gi|218184058|gb|EEC66485.1| hypothetical protein OsI_32578 [Oryza sativa Indica Group]
Length = 1360
Score = 189 bits (479), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/313 (38%), Positives = 174/313 (55%), Gaps = 12/313 (3%)
Query: 558 SKLVLEDFCFKRASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGI 616
++ LE A + F+T SSS KL S + +VIDEAAQ E PL L G
Sbjct: 956 ARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAVLPPLSL-GA 1014
Query: 617 NHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNL 676
VL+GD QLPA V SK + + RSLFER LL++QYRMHP I FP+
Sbjct: 1015 ARCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQLSGCPTILLSVQYRMHPQIREFPSR 1074
Query: 677 QFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSC--RNIVEVSAVI 734
FY+ ++ D +V K ++ Y Y F +I GRE S +N+ E V+
Sbjct: 1075 HFYQGRLTDSESV-VKLPDEAYYRDALMAPYIFYDISHGRESHRGGSSSYQNVHEAQFVL 1133
Query: 735 KI---LQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQ 791
++ LQK +A G +K S+G+++PY Q+ ++++ +DG + + ++D FQ
Sbjct: 1134 RLYENLQKFLRANGG--KKASVGIITPYKLQLKCLQREFEEVMSTEDGKDIYINTVDAFQ 1191
Query: 792 GGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
G E D+II+S VR + G +GF++ +R+NVALTRAR LW++G+ L+ SE W L+
Sbjct: 1192 GQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVVGNAGALMQSED-WALLI 1249
Query: 852 CDAKARQCFFNAD 864
DAKAR+CF + D
Sbjct: 1250 ADAKARKCFMDLD 1262
>gi|449465617|ref|XP_004150524.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
[Cucumis sativus]
Length = 1363
Score = 189 bits (479), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/312 (37%), Positives = 174/312 (55%), Gaps = 14/312 (4%)
Query: 558 SKLVLEDFCFKRASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGI 616
++ LE A + F+T SSS KL S + +VIDEAAQ E PL L G
Sbjct: 946 ARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAVLPPLSL-GA 1004
Query: 617 NHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNL 676
VL+GD QLPA V SK + + RSLFER LL++QYRMHP I FP+
Sbjct: 1005 ARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFPSR 1064
Query: 677 QFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSC--RNIVEVS 731
FY+ ++ D AN+ ++Y K L Y+F +I GRE S +NI E
Sbjct: 1065 YFYQGRLTDSESVANLPDETYYKDPL----LRPYTFFDITHGRESHRGGSVSYQNIHEAQ 1120
Query: 732 AVIKILQKLYKAWVGSK-QKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGF 790
+++ + L K S KVS+G+++PY Q+ ++++ +++G + + ++D F
Sbjct: 1121 FCLRMYEHLQKTVKSSGIGKVSVGIITPYKLQLKCLQREFEEVLNSEEGKDLYINTVDAF 1180
Query: 791 QGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGAL 850
QG E D+II+S VR + G +GF++ +R+NVALTRAR LW++G+ LI S+ W AL
Sbjct: 1181 QGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMGNANALIQSDD-WAAL 1238
Query: 851 VCDAKARQCFFN 862
+ DAKAR C+ +
Sbjct: 1239 ITDAKARNCYMD 1250
>gi|413934411|gb|AFW68962.1| hypothetical protein ZEAMMB73_667161 [Zea mays]
Length = 1399
Score = 189 bits (479), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/319 (37%), Positives = 175/319 (54%), Gaps = 12/319 (3%)
Query: 552 NLPCTTSKLVLEDFCFKRASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIP 610
N ++ LE A + F+T SSS KL S + +VIDEAAQ E P
Sbjct: 986 NFNMEDARASLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPP 1045
Query: 611 LQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSI 670
L L G VL+GD QLPA V SK + + RSLFER LL++QYRMHP I
Sbjct: 1046 LAL-GAARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQQAGCPTILLSVQYRMHPQI 1104
Query: 671 SLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSC--RNIV 728
FP+ FY+ ++ D +V K ++ Y Y F ++ GRE S +NI
Sbjct: 1105 REFPSKYFYQGRLTDSESV-VKLPDEAYYRDALMAPYIFYDLSHGRESHRGGSSSYQNIH 1163
Query: 729 EVSAVIKI---LQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVK 785
E +++ LQK KA +KVS+G+++PY Q+ ++++ ++G + +
Sbjct: 1164 EAQFALRLYEHLQKFLKA--NGAKKVSVGIITPYKLQLKCLQREFKDVMNTEEGKDIYIN 1221
Query: 786 SIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSES 845
++D FQG E DIII+S VR + G +GF++ +R+NVALTRAR LW++G+ L+ SE
Sbjct: 1222 TVDAFQGQERDIIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVVGNANALMQSED 1280
Query: 846 IWGALVCDAKARQCFFNAD 864
W +L+ DAKAR+CF + D
Sbjct: 1281 -WASLIADAKARKCFMDLD 1298
>gi|414868096|tpg|DAA46653.1| TPA: hypothetical protein ZEAMMB73_170269 [Zea mays]
Length = 809
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/313 (38%), Positives = 174/313 (55%), Gaps = 12/313 (3%)
Query: 558 SKLVLEDFCFKRASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGI 616
++ LE A + F+T SSS KL S + +VIDEAAQ E PL L G
Sbjct: 404 ARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVGVLPPLAL-GA 462
Query: 617 NHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNL 676
VL+GD QLPA V SK + + RSLFER LL++QYRMHP I FP+
Sbjct: 463 ARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQQAGCPTILLSVQYRMHPQIREFPSK 522
Query: 677 QFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSC--RNIVEVSAVI 734
FY+ ++ D +V K ++ Y Y F ++ GRE S +NI E +
Sbjct: 523 YFYQGRLTDSESV-VKLPDEAYYRDALMAPYIFYDMSHGRESHRGGSSSYQNIHEAQFAL 581
Query: 735 KI---LQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQ 791
++ LQK KA +KVS+G+++PY Q+ ++++ ++G + + ++D FQ
Sbjct: 582 RLYEHLQKFLKA--NGAKKVSVGIITPYKLQLKCLQREFKDVMNTEEGKDIYINTVDAFQ 639
Query: 792 GGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
G E DIII+S VR + G +GF++ +R+NVALTRAR LW++G+ L+ SE W +L+
Sbjct: 640 GQERDIIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVVGNANALMQSED-WASLI 697
Query: 852 CDAKARQCFFNAD 864
DAKAR+CF + D
Sbjct: 698 ADAKARKCFMDLD 710
>gi|302811594|ref|XP_002987486.1| hypothetical protein SELMODRAFT_426269 [Selaginella moellendorffii]
gi|300144892|gb|EFJ11573.1| hypothetical protein SELMODRAFT_426269 [Selaginella moellendorffii]
Length = 2281
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/274 (38%), Positives = 154/274 (56%), Gaps = 5/274 (1%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHA--VLIGDECQLPAMVESKISDEAGFGRSLFE 648
+ +VIDEA Q E S IPLQ G NH VL+GD QLPA V S+ + + RS+FE
Sbjct: 1761 FDAVVIDEAGQALEPASLIPLQFLGGNHGRCVLVGDPKQLPATVLSQAASSVCYERSMFE 1820
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYS 708
R + +L+ QYRMHP I FP+ FY NQ++DGA+V + F Y+
Sbjct: 1821 RFQKNGYPVTMLSTQYRMHPDIRKFPSSYFYNNQLVDGASVLGDKRRSSFHKDRFFRPYT 1880
Query: 709 FINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
F ++I G+E S N+ EV +K+ ++ + Q IGV++PY Q+ +++
Sbjct: 1881 FFDVIDGQERAGGSSVGNVDEVDVAVKLYERFQAKYPQEIQPGRIGVITPYKQQLNMLKR 1940
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCN-TGGSIGFISKPQRVNVALTRA 827
+ K ++ +IDGFQG E DI+I+STVR + IGF++ +R+NVALTR
Sbjct: 1941 AFQ-RFGEKISSILEFNTIDGFQGREVDILILSTVRASLEPKGIGFVADIRRMNVALTRP 1999
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFF 861
R LWI+GS R L S+ + W AL+ DA +R +
Sbjct: 2000 RFSLWIIGSARALRSNRA-WAALLEDATSRGAVY 2032
>gi|224082154|ref|XP_002306584.1| predicted protein [Populus trichocarpa]
gi|222856033|gb|EEE93580.1| predicted protein [Populus trichocarpa]
Length = 1147
Score = 187 bits (474), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 114/314 (36%), Positives = 176/314 (56%), Gaps = 14/314 (4%)
Query: 558 SKLVLEDFCFKRASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGI 616
++ LE A + F+T SSS KL S + +VIDEAAQ E PL L G
Sbjct: 735 ARASLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVAVLPPLAL-GA 793
Query: 617 NHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNL 676
VL+GD QLPA V SK + + RSLFER LL++QYRMHP I FP+
Sbjct: 794 ARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFPSR 853
Query: 677 QFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSC--RNIVEVS 731
FY+ ++ D AN+ ++Y K L Y F ++ GRE S +NI E
Sbjct: 854 YFYQGRLTDSESVANLPDETYYKDPL----LRPYLFYDVTHGRESHRGGSVSYQNIHEAQ 909
Query: 732 AVIKILQKLYKAWVG-SKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGF 790
+++ + L K+ ++++G+++PY Q+ ++++ ++++G + + ++D F
Sbjct: 910 FCLQLYEHLQKSLKSLGMGRITVGIITPYKLQLKCLQQEFSAVLKSEEGKDIYINTVDAF 969
Query: 791 QGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGAL 850
QG E D+II+S VR + G +GF++ +R+NVALTRA+ LW++G+ +L+ S+ W AL
Sbjct: 970 QGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRAKRALWVMGNATSLVQSDD-WSAL 1027
Query: 851 VCDAKARQCFFNAD 864
V DAKAR C+ N D
Sbjct: 1028 VADAKARNCYMNMD 1041
>gi|328873818|gb|EGG22184.1| putative splicing endonuclease [Dictyostelium fasciculatum]
Length = 1947
Score = 187 bits (474), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 164/288 (56%), Gaps = 12/288 (4%)
Query: 567 FKRASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDE 625
RAS+ ST S S Y+ S +K + ++IDEAAQ E + IPL+ + +L+GD
Sbjct: 1591 LNRASIILSTLSGSGYESLSAAVKQFDVVIIDEAAQAVELSTLIPLK-HNVKKCILVGDP 1649
Query: 626 CQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILD 685
QLPA V S+I+ + +SLF+RL+ +LN+QYRMHP+IS FP+ FY QI D
Sbjct: 1650 NQLPATVISRITTNFQYEQSLFQRLSQCGIPMQVLNVQYRMHPTISRFPSKHFYHGQIKD 1709
Query: 686 GANVKSKSYEKQYLTGTEFGTYSFINIIGGREDF--IYHSCRNIVEVSAVIKILQKLYKA 743
G NV + ++ FG + F +I ED HS RN+ E I+ +L
Sbjct: 1710 GHNVIALNH--NIYKDARFGPFIFYDITDSVEDSNQSSHSLRNVHEAKLANLIISQLLVH 1767
Query: 744 WVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTV 803
+ +K+SIGV++PY Q + + +++ V+V ++DGFQG E+DIII S V
Sbjct: 1768 FSKDCEKLSIGVITPYKQQQIELSRRLSHF-----NSMVEVNTVDGFQGREKDIIIFSCV 1822
Query: 804 RCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
R + GGSIGF+S +R+NV LTRA+ + ++G L+ S WG L+
Sbjct: 1823 RAHKGGSIGFLSDVRRMNVGLTRAKLSMIVIG-HTNLLMLNSDWGELI 1869
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 27/127 (21%)
Query: 247 EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTV----SMLLLTL 302
+K + +LN+SQ+ A+ A L SG L+ GPPGTGKTKT+ S+LL T+
Sbjct: 1363 KKLESALKESLNDSQIEAIHASLTP------SGFTLLQGPPGTGKTKTIIALLSVLLHTM 1416
Query: 303 LRIK----------CRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILL 352
IK + L P+N A+ E+A+R+L + +D P C +
Sbjct: 1417 TPIKDDSKLKNQAPIKILVTAPSNAAVDEIATRILD--QRMLNQDGLPYQPFC-----IR 1469
Query: 353 FGNKDRL 359
GNK ++
Sbjct: 1470 IGNKQQI 1476
>gi|210075156|ref|XP_002142993.1| YALI0A19404p [Yarrowia lipolytica]
gi|199424904|emb|CAG84178.4| YALI0A19404p [Yarrowia lipolytica CLIB122]
Length = 1930
Score = 187 bits (474), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 121/325 (37%), Positives = 180/325 (55%), Gaps = 14/325 (4%)
Query: 557 TSKLVLEDFCFKRASLFFST--ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLA 614
T K L K A + ST ASS L S+ + ++IDEA Q E IP++
Sbjct: 1430 TEKRNLNIRVLKEAEIICSTLSASSHNMLKSLGVA-FETVIIDEACQCIELSVLIPMKY- 1487
Query: 615 GINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSK-HLLNIQYRMHPSISLF 673
G +A+++GD QLP V S ++ ++ + +SLF R+ + N S H+L+ QYRMHP IS+F
Sbjct: 1488 GCTNAIMVGDPNQLPPTVLSTVAAKSKYEQSLFVRMQTANPSALHMLDTQYRMHPDISVF 1547
Query: 674 PNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAV 733
P QFYR + DGA + K+ +K + + Y+F ++ G +E HS N EV
Sbjct: 1548 PREQFYRGILKDGAGMAEKT-KKPWHEYKQLAPYAFFDVAGNQEATRNHSFFNDAEV--- 1603
Query: 734 IKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGG 793
+ +LY+ K+ IG++SPY QV+ +++ EY ++ S+DGFQG
Sbjct: 1604 -HLADQLYRLMSNMYGKIDIGIISPYKQQVLRLKRHFTREYGGDILDKIEFNSVDGFQGQ 1662
Query: 794 EEDIIIISTVRCNT-GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVC 852
E+DIII+S VR + S+GF++ +R+NVA TRAR +WILG+ TL S +IW +V
Sbjct: 1663 EKDIIIMSCVRASPDSDSVGFLADKRRMNVAFTRARSSMWILGNADTL-SRNTIWRKVVN 1721
Query: 853 DAKARQCFFNADEERNLAKARLEVS 877
DA+ R D R L K L V+
Sbjct: 1722 DARNRDMLM--DGNRPLRKQDLIVA 1744
Score = 51.6 bits (122), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC--------R 308
+N+SQ A+ L + +G LI GPPGTGKTKT+ ++ + L K R
Sbjct: 1235 VNDSQAAAIYGSL------NNTGFSLIQGPPGTGKTKTILGIVGSFLSKKASDIGNDNRR 1288
Query: 309 TLACTPTNVAITELASRVLKLVKESYKRDSRSNTP 343
L C P+N A+ EL VL+L Y + + P
Sbjct: 1289 ILLCAPSNAAVDEL---VLRLSDGIYSSSGQKSEP 1320
>gi|449529064|ref|XP_004171521.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized ATP-dependent
helicase C29A10.10c-like [Cucumis sativus]
Length = 1363
Score = 187 bits (474), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 117/312 (37%), Positives = 173/312 (55%), Gaps = 14/312 (4%)
Query: 558 SKLVLEDFCFKRASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGI 616
++ LE A + F+T SSS KL S + +VIDEAAQ E P L G
Sbjct: 946 ARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAVLPPXSL-GA 1004
Query: 617 NHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNL 676
VL+GD QLPA V SK + + RSLFER LL++QYRMHP I FP+
Sbjct: 1005 ARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFPSR 1064
Query: 677 QFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSC--RNIVEVS 731
FY+ ++ D AN+ ++Y K L Y+F +I GRE S +NI E
Sbjct: 1065 YFYQGRLTDSESVANLPDETYYKDPL----LRPYTFFDITHGRESHRGGSVSYQNIHEAQ 1120
Query: 732 AVIKILQKLYKAWVGSK-QKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGF 790
+++ + L K S KVS+G+++PY Q+ ++++ +++G + + ++D F
Sbjct: 1121 FCLRMYEHLQKTVKSSGIGKVSVGIITPYKLQLKCLQREFEEVLNSEEGKDLYINTVDAF 1180
Query: 791 QGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGAL 850
QG E D+II+S VR + G +GF++ +R+NVALTRAR LW++G+ LI S+ W AL
Sbjct: 1181 QGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMGNANALIQSDD-WAAL 1238
Query: 851 VCDAKARQCFFN 862
+ DAKAR C+ +
Sbjct: 1239 ITDAKARNCYMD 1250
>gi|302796659|ref|XP_002980091.1| hypothetical protein SELMODRAFT_444379 [Selaginella moellendorffii]
gi|300152318|gb|EFJ18961.1| hypothetical protein SELMODRAFT_444379 [Selaginella moellendorffii]
Length = 2265
Score = 186 bits (471), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 153/274 (55%), Gaps = 5/274 (1%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHA--VLIGDECQLPAMVESKISDEAGFGRSLFE 648
+ +VIDEA Q E S IPLQ G NH VL+GD QLPA V S+ + + RS+FE
Sbjct: 1764 FDAVVIDEAGQALEPASLIPLQFLGGNHGRCVLVGDPKQLPATVLSQAASSVCYERSMFE 1823
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYS 708
R + +L+ QYRMHP I FP+ FY NQ++DGA+V + F Y+
Sbjct: 1824 RFQKNGYPVTMLSTQYRMHPDIRKFPSSYFYNNQLVDGASVLGDKRRASFHNDRFFRPYT 1883
Query: 709 FINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
F ++I G+E S N+ EV +K+ ++ + Q IGV++PY Q+ +++
Sbjct: 1884 FFDVIDGQERAGGSSVGNVDEVDVAVKLYERFQAKYPQEIQPGRIGVITPYKQQLNMLKR 1943
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCN-TGGSIGFISKPQRVNVALTRA 827
+ K ++ +IDGFQG E DI+I+STVR + IGF++ +R+NVALTR
Sbjct: 1944 AFQ-RFGEKISSILEFNTIDGFQGREVDILILSTVRASLEPKGIGFVADIRRMNVALTRP 2002
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFF 861
R LWI+GS L S+ + W AL+ DA +R +
Sbjct: 2003 RFSLWIIGSAMALRSNRA-WAALLEDATSRGAVY 2035
>gi|213405365|ref|XP_002173454.1| helicase sen1 [Schizosaccharomyces japonicus yFS275]
gi|212001501|gb|EEB07161.1| helicase sen1 [Schizosaccharomyces japonicus yFS275]
Length = 1719
Score = 186 bits (471), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/389 (33%), Positives = 199/389 (51%), Gaps = 37/389 (9%)
Query: 476 NSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHS------VDEGISWAFVRKRYLLQ 529
+S Q + L+ LD ++ + VS EL K+F +DE R R L
Sbjct: 1288 DSLQAIENLQKQLDIAKSINENVDAVSTELNKMFEQKNLAEQKIDEFQDHKIARNRDLDM 1347
Query: 530 LHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIK 589
++ + L L E ++ C+T + RA+L F+T
Sbjct: 1348 TRRKIQQAL---------LKECDVVCSTLSGSGHELV-ARANLTFNT------------- 1384
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
++IDEAAQ E ++ IPL+ G VL+GD QLP + SK + + + +S+F R
Sbjct: 1385 ----VIIDEAAQAVELDTIIPLKY-GAARCVLVGDPNQLPPTILSKKAVKLNYSQSMFVR 1439
Query: 650 L-TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYS 708
+ + LL+IQYRMHP IS FP+ QFY +++LDG NV +K+ + + FG Y
Sbjct: 1440 IQNNFPEQLELLSIQYRMHPEISQFPSCQFYNSRLLDGDNVATKTLQPWH-KNPLFGQYR 1498
Query: 709 FINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
++ G + S N E +V + + ++ IG+V+PY +Q+ +R+
Sbjct: 1499 VFDVRGTEKQSKTFSLYNPEEAKSVTDLFDLMTSSFPTVDFASKIGIVTPYRSQLKELRR 1558
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
+Y + +IDGFQG E+DIII+S VR TGGSIGF+ +R+NVALTRAR
Sbjct: 1559 AFSRKYGRAFASKFDMNTIDGFQGQEKDIIILSCVRSETGGSIGFLRDFRRLNVALTRAR 1618
Query: 829 HCLWILGSERTLISSESIWGALVCDAKAR 857
L+I+G+ TL S+ +WG+L+ +AK R
Sbjct: 1619 SSLFIVGNVETLF-SDDLWGSLLANAKER 1646
Score = 49.7 bits (117), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 76/179 (42%), Gaps = 44/179 (24%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT----VSMLLLTL---------- 302
+NE Q A+LA L + G LI GPPGTGKTKT VS LLL L
Sbjct: 1140 VNEPQAHAILASLDNV------GFTLIQGPPGTGKTKTIVGIVSALLLDLNNYHITRPDS 1193
Query: 303 ----LRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDR 358
+ K + L C P+N A+ E+ +L+L + +D + P ++ GN +
Sbjct: 1194 KQDSEKTKQKILLCAPSNAAVDEV---ILRLKRGFTLQDGSTYKP-----KLVRIGNAE- 1244
Query: 359 LKVNPGFEEIYLNYRIKK--LREC--------FAPLSGWRHCFSSMIDLLEDCVSQYHI 407
VN + + Y+ +K L C L+ WR + + +E+ Q I
Sbjct: 1245 -SVNMYVRDTSIEYQTEKQLLEVCNDLPELTVLKELTHWRDVYYDSLQAIENLQKQLDI 1302
>gi|147779903|emb|CAN65841.1| hypothetical protein VITISV_009619 [Vitis vinifera]
Length = 1408
Score = 185 bits (470), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/349 (34%), Positives = 189/349 (54%), Gaps = 21/349 (6%)
Query: 523 RKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSS-Y 581
R + L+++++ L +L + + S NL ++ LE A + F+T SSS
Sbjct: 963 RDKILVEMNR-----LVILESRFRSGSNFNL--EEARANLEASFANEAEIVFTTVSSSGR 1015
Query: 582 KLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAG 641
KL S + +VIDEAAQ E PL L G VL+GD QLPA V SK +
Sbjct: 1016 KLFSRLTHGFDMVVIDEAAQASEVAVLPPLSL-GAARCVLVGDPQQLPATVISKAAGTLL 1074
Query: 642 FGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQY 698
+ RSLFER LL++QYRMHP I FP+ FY+ ++ D N+ ++Y K
Sbjct: 1075 YSRSLFERFQQAGCPTMLLSVQYRMHPHIRDFPSRYFYQGRLTDSESVTNLPDEAYYKDP 1134
Query: 699 LTGTEFGTYSFINIIGGREDFIYHSC--RNIVEVSAVIKILQKLYKAWVG-SKQKVSIGV 755
L Y F +I GRE S +NI E +++ + L K K+S+G+
Sbjct: 1135 L----LRPYVFYDITHGRESHRGGSVSYQNIHEAQICLRLYEHLQKTLKSLGMGKISVGI 1190
Query: 756 VSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFIS 815
++PY Q+ ++++ +++G + + ++D FQG E D+II+S VR ++ G +GF++
Sbjct: 1191 ITPYKLQLKCLQREFDDVLSSEEGKDLYINTVDAFQGQERDVIIMSCVRASSHG-VGFVA 1249
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
+R+NVALTRAR LW++G+ L+ S+ W AL+ DA+AR C+ + D
Sbjct: 1250 DIRRMNVALTRARRALWVMGNANALMQSDD-WAALISDARARSCYLDMD 1297
>gi|302141933|emb|CBI19136.3| unnamed protein product [Vitis vinifera]
Length = 1073
Score = 185 bits (470), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/334 (35%), Positives = 181/334 (54%), Gaps = 16/334 (4%)
Query: 538 LSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSS-YKLHSVEIKPLNFLVI 596
L +L + + S NL ++ LE A + F+T SSS KL S + +VI
Sbjct: 724 LVILESRFRSGSNFNL--EEARANLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVI 781
Query: 597 DEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHS 656
DEAAQ E PL L G VL+GD QLPA V SK + + RSLFER
Sbjct: 782 DEAAQASEVAVLPPLSL-GAARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQQAGCP 840
Query: 657 KHLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYSFINII 713
LL++QYRMHP I FP+ FY+ ++ D N+ ++Y K L Y F +I
Sbjct: 841 TMLLSVQYRMHPHIRDFPSRYFYQGRLTDSESVTNLPDEAYYKDPL----LRPYVFYDIT 896
Query: 714 GGREDFIYHSC--RNIVEVSAVIKILQKLYKAWVG-SKQKVSIGVVSPYTAQVVAIRKKI 770
GRE S +NI E +++ + L K K+S+G+++PY Q+ ++++
Sbjct: 897 HGRESHRGGSVSYQNIHEAQICLRLYEHLQKTLKSLGMGKISVGIITPYKLQLKCLQREF 956
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
+++G + + ++D FQG E D+II+S VR ++ G +GF++ +R+NVALTRAR
Sbjct: 957 DDVLSSEEGKDLYINTVDAFQGQERDVIIMSCVRASSHG-VGFVADIRRMNVALTRARRA 1015
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
LW++G+ L+ S+ W AL+ DA+AR C+ + D
Sbjct: 1016 LWVMGNANALMQSDD-WAALISDARARSCYLDMD 1048
>gi|225459354|ref|XP_002284214.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
[Vitis vinifera]
Length = 1375
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/349 (34%), Positives = 189/349 (54%), Gaps = 21/349 (6%)
Query: 523 RKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSS-Y 581
R + L+++++ L +L + + S NL ++ LE A + F+T SSS
Sbjct: 930 RDKILVEMNR-----LVILESRFRSGSNFNL--EEARANLEASFANEAEIVFTTVSSSGR 982
Query: 582 KLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAG 641
KL S + +VIDEAAQ E PL L G VL+GD QLPA V SK +
Sbjct: 983 KLFSRLTHGFDMVVIDEAAQASEVAVLPPLSL-GAARCVLVGDPQQLPATVISKAAGTLL 1041
Query: 642 FGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQY 698
+ RSLFER LL++QYRMHP I FP+ FY+ ++ D N+ ++Y K
Sbjct: 1042 YSRSLFERFQQAGCPTMLLSVQYRMHPHIRDFPSRYFYQGRLTDSESVTNLPDEAYYKDP 1101
Query: 699 LTGTEFGTYSFINIIGGREDFIYHSC--RNIVEVSAVIKILQKLYKAWVG-SKQKVSIGV 755
L Y F +I GRE S +NI E +++ + L K K+S+G+
Sbjct: 1102 L----LRPYVFYDITHGRESHRGGSVSYQNIHEAQICLRLYEHLQKTLKSLGMGKISVGI 1157
Query: 756 VSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFIS 815
++PY Q+ ++++ +++G + + ++D FQG E D+II+S VR ++ G +GF++
Sbjct: 1158 ITPYKLQLKCLQREFDDVLSSEEGKDLYINTVDAFQGQERDVIIMSCVRASSHG-VGFVA 1216
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
+R+NVALTRAR LW++G+ L+ S+ W AL+ DA+AR C+ + D
Sbjct: 1217 DIRRMNVALTRARRALWVMGNANALMQSDD-WAALISDARARSCYLDMD 1264
>gi|213408549|ref|XP_002175045.1| helicase sen1 [Schizosaccharomyces japonicus yFS275]
gi|212003092|gb|EEB08752.1| helicase sen1 [Schizosaccharomyces japonicus yFS275]
Length = 1974
Score = 184 bits (468), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/301 (36%), Positives = 172/301 (57%), Gaps = 9/301 (2%)
Query: 567 FKRASLFFSTASSSYKLHSVEIKP-LNF--LVIDEAAQLKESESTIPLQLAGINHAVLIG 623
K A + ST S+S H + +K ++F ++IDEAAQ E + IPL+ G +++G
Sbjct: 1489 LKDAEIICSTLSASG--HDILLKSGISFPSVIIDEAAQAVELSALIPLKY-GCERCIMVG 1545
Query: 624 DECQLPAMVESKISDEAGFGRSLFERLTSLN-HSKHLLNIQYRMHPSISLFPNLQFYRNQ 682
D QLP V SK + + G+ SL+ R+ N +S LL+IQYRMHP IS FP+ FY ++
Sbjct: 1546 DPNQLPPTVLSKTASQNGYSESLYVRMHKQNPNSSFLLSIQYRMHPEISRFPSSYFYGSR 1605
Query: 683 ILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYK 742
+LDG +++ K + + FG Y F ++ I S N E S V+ + KL +
Sbjct: 1606 LLDGPDMQ-KLTARPWHHDPTFGIYRFFDVRTRESSSITKSVYNPEEASFVLTLYDKLVQ 1664
Query: 743 AWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIIST 802
++ + +G+V+PY Q+ +R + Y V ++DGFQG E+DII+ S
Sbjct: 1665 DYINVDMEGKVGIVTPYRRQLQELRMQFERRYGPLIFKRVDFNTVDGFQGQEKDIILFSC 1724
Query: 803 VRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFN 862
VR + GG IGF+S +R+NVALTRA+ L+I+G+ TL + + +W AL+ DA+ R C
Sbjct: 1725 VRGDMGGGIGFLSDTRRLNVALTRAKSSLYIIGNVGTL-TKDKMWSALITDAQTRSCLVT 1783
Query: 863 A 863
+
Sbjct: 1784 S 1784
Score = 50.4 bits (119), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 33/154 (21%)
Query: 192 SFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGP 251
SF+ L +I N R ++SL + V ++ ++ RC C + + ++
Sbjct: 1216 SFYVQKLFSITTNLREYSSLRALSFYDV------SEDIIKARCNPCDLSLQPPQLKRVME 1269
Query: 252 SFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL-------R 304
S+ +NE Q A+ A C R+G L+ GPPGTGKTKT+ ++ LL R
Sbjct: 1270 SYH--VNEPQALAIHAA-----CA-RTGFTLVQGPPGTGKTKTILGIVSALLTSGGQGRR 1321
Query: 305 IKC------------RTLACTPTNVAITELASRV 326
+ L C P+N AI E+ R+
Sbjct: 1322 FDAPGQNGNTQPGTKKVLICAPSNAAIDEILLRL 1355
>gi|348684269|gb|EGZ24084.1| hypothetical protein PHYSODRAFT_359182 [Phytophthora sojae]
Length = 2487
Score = 184 bits (468), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/364 (32%), Positives = 195/364 (53%), Gaps = 22/364 (6%)
Query: 511 HSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRA 570
H+ +E + ++ L ++HQ+ +EC +R L + + T + + + +A
Sbjct: 1716 HNKEEDANGPKKDRKALAKMHQQLTECSGKIRRLRDEV-------TAIRAKMTETILSKA 1768
Query: 571 SLFFSTASSSYKLHSVEIK-PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLP 629
S+ T S + E+K + L+IDEAAQ E + +P++ + VL+GD QLP
Sbjct: 1769 SIIACTLSKAGSGDFSELKHGFDALIIDEAAQAVELSTLVPIR-ERVARVVLVGDPKQLP 1827
Query: 630 AMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANV 689
A V+S ++ +A + RSLFER+ + +L +QYRMHP + FP+ +FY + DG +V
Sbjct: 1828 ATVKSVVAAKARYDRSLFERIAESGVAPSMLRVQYRMHPFLRDFPSKRFYGGMLTDGPSV 1887
Query: 690 KSKSYE--KQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVG- 746
+ + T F + ++ RE+ + S N VE + I + Q +++
Sbjct: 1888 MERVQKVCPGVYAHTSFQPFLLYDVENSREEDMNGSKYNRVEAAFCISLCQNMFETIADV 1947
Query: 747 SKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGF----TVKVKSIDGFQGGEEDIIIIST 802
K K S+G VSPY QV +R++I K G +++V ++DGFQG E+D+II S
Sbjct: 1948 RKNKWSVGFVSPYKEQVRVLRQEI-----TKSGIPTTVSIEVNTVDGFQGREKDVIIFSC 2002
Query: 803 VRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFN 862
VR + G IGF+ +R+NVA+TRAR CL+++G+ TL+ E+ W ALV A+ R+
Sbjct: 2003 VRASKRGGIGFLRDIRRLNVAITRARFCLYVVGNVNTLVRDET-WAALVKSARDRKLIIR 2061
Query: 863 ADEE 866
E
Sbjct: 2062 TKGE 2065
>gi|298715587|emb|CBJ28140.1| hypothetical protein Esi_0092_0081 [Ectocarpus siliculosus]
Length = 1244
Score = 184 bits (466), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 172/312 (55%), Gaps = 17/312 (5%)
Query: 562 LEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVL 621
LE A L FST +SS + P LV+DEAAQ E + IPL+L G H VL
Sbjct: 459 LEVTLLDEAHLVFSTLNSSGLPCMDQTSPFEVLVVDEAAQSVEVSTIIPLRL-GCRHCVL 517
Query: 622 IGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRN 681
+GD QLPA V S+ + + RSLF+RL + +H +L++QYRMHP+IS FP+ FY
Sbjct: 518 VGDPNQLPATVFSQGGKLSQYDRSLFQRLEANDHPVQMLDVQYRMHPTISAFPSATFYDG 577
Query: 682 QILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRED--FIYHSCRNIVEVSAVIKILQK 739
++ DG NV +Y + + T F + F ++ G + S N +E + +
Sbjct: 578 KLKDGGNVSMPAYSRAFHTHPIFQPFMFFDLTTGEQTRRGGGGSLSNPMEAMLAVNVYVT 637
Query: 740 LYKAWVGSKQKVS---------IGVVSPYTAQVVAIRKKIGFEYENKDGF--TVKVKSID 788
L +++ G ++ S +GV+SPY Q+ +++K FE G+ V++ ++D
Sbjct: 638 LKRSFGGVGERGSGDEHGIAGRVGVISPYAKQIKVLKEK--FEESLGRGWHEQVEISTVD 695
Query: 789 GFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWG 848
FQG E+D+II+STVR IGF++ +R+NVALTRARH L+++GS L S W
Sbjct: 696 AFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFVVGSAEAL-SVNPKWK 754
Query: 849 ALVCDAKARQCF 860
L A++R+
Sbjct: 755 ELADLAESREGL 766
>gi|393212617|gb|EJC98117.1| hypothetical protein FOMMEDRAFT_97735 [Fomitiporia mediterranea
MF3/22]
Length = 1825
Score = 184 bits (466), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 110/284 (38%), Positives = 164/284 (57%), Gaps = 16/284 (5%)
Query: 587 EIKPLNF--LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGR 644
+++P +F ++IDEAAQ E S IPL+ V++GD QLP V S + + G+ +
Sbjct: 1542 QLEPFDFSMVIIDEAAQSIELSSLIPLKYTS-TRCVMVGDPQQLPPTVLSPEASKWGYDQ 1600
Query: 645 SLFERLTSLN-HSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTE 703
SLF RL + HLL+IQYRMHP ISL P+ FY ++ DG ++ K+ E+ +
Sbjct: 1601 SLFVRLQKCRPEAVHLLSIQYRMHPEISLLPSKVFYGGRLRDGPDMDKKT-EQLWHNEPR 1659
Query: 704 FGTYSFINIIGGRED--FIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTA 761
FG Y F ++ G+E+ I HS N E +I +L K + +G+VSPY +
Sbjct: 1660 FGAYKFFSVENGKEEQARIGHSIYNQAECRTIIAAYDRLRKQFSSINFDYRVGIVSPYRS 1719
Query: 762 QVVAIRK----KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG-GSIGFISK 816
QV+ +RK + G E +K F ++DGFQG E+DII++S VR T ++GF++
Sbjct: 1720 QVLEMRKLFTQRFGAEIVSKVDFN----TVDGFQGQEKDIIMLSCVRAGTSLATVGFLAD 1775
Query: 817 PQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
+R+NVA+TRAR L+I G TL S +W +V DA++R CF
Sbjct: 1776 IRRMNVAITRARSSLFIFGHAPTLQRSNRVWKDIVDDARSRACF 1819
>gi|281202655|gb|EFA76857.1| putative splicing endonuclease [Polysphondylium pallidum PN500]
Length = 1423
Score = 183 bits (464), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 106/265 (40%), Positives = 159/265 (60%), Gaps = 12/265 (4%)
Query: 588 IKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLF 647
IK + ++IDEAAQ E + IPL+ + +L+GD QLP + S+++ + + SLF
Sbjct: 1045 IKKFDVVIIDEAAQAVEPSTLIPLK-HNVMKCILVGDPNQLPPTIISRMASQYQYETSLF 1103
Query: 648 ERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTY 707
+RL+S + +L +QYRMHPSIS FP+ FY N + DG NV K+Y +++ FG +
Sbjct: 1104 QRLSSCGIPQQVLKVQYRMHPSISRFPSRHFYMNVLEDGPNV--KNYTEEFYKDPRFGPF 1161
Query: 708 SFINIIGGREDF-IYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
F +I E+ HS +N+ E V ++ L ++ K+ SIGV++PY QV I
Sbjct: 1162 IFYDIYDSNEESGPGHSLKNVTEAKLVALLITNLENSFPNIKK--SIGVITPYKQQVHEI 1219
Query: 767 RKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTR 826
+++I N+D + V S+DGFQG E+DIII S VR + GG+IGF+S +R+NV LTR
Sbjct: 1220 KRRIS--PVNQD---IDVSSVDGFQGREKDIIIFSCVRAHRGGTIGFLSDVRRMNVGLTR 1274
Query: 827 ARHCLWILGSERTLISSESIWGALV 851
AR L ++G+ L+ W ALV
Sbjct: 1275 ARSSLIVIGNS-NLLKLNPDWEALV 1298
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 137/337 (40%), Gaps = 66/337 (19%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
+ SW++E + +Q ++ +P SF+++ +Y F LL+E + QL
Sbjct: 605 ILSWNVE-MLNQ--VDANLKVLPTSFENLSEYIQIFQPLLLQEFKGQL------------ 649
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPE-KVSDLRR 149
+ A EEL+P GT Y + ++ G+ +L D E + DL
Sbjct: 650 --LKAVEELEPSGTQ-------YVLDDVAREGEFHV------VLFFLDGDEEFSLEDLVL 694
Query: 150 VGRTWTFVSVTTVPDDEDENKKENRYKVKAR-------------NNMQVHDKTKKSFFFI 196
+ + V E++ KKE + K AR + H K K +
Sbjct: 695 LQKEILGVKFEVFGKIENKGKKERKDKNSARCAYISVKFHQLEKIGLLKHMKIKTQWNIQ 754
Query: 197 YLTNILPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSST 256
LT++ R + +LH+ G + + ++ + + +V K S
Sbjct: 755 KLTSLSTVNREYLALHLVGKIPLGSYIISPALAITNQERTNNVVIPPALHNKL----LSE 810
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC--------- 307
LN SQ+ A+ L H G L+ GPPGTGKTKT+ LL LL
Sbjct: 811 LNSSQMEAIYHSL----IPH--GFTLLQGPPGTGKTKTIMALLSVLLSTPLDSKINSTAP 864
Query: 308 -RTLACTPTNVAITELASRVLKLVKESYKRDSRSNTP 343
+ L C P+N A+ E+ASR++ + + +D S P
Sbjct: 865 PKILVCAPSNAAVDEIASRIID--GDMFDKDGNSYVP 899
>gi|301105483|ref|XP_002901825.1| ATP-dependent helicase, putative [Phytophthora infestans T30-4]
gi|262099163|gb|EEY57215.1| ATP-dependent helicase, putative [Phytophthora infestans T30-4]
Length = 2378
Score = 183 bits (464), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/364 (32%), Positives = 199/364 (54%), Gaps = 23/364 (6%)
Query: 524 KRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKL 583
++ L ++HQ+ +EC +R L + + TT + + + +AS+ T S +
Sbjct: 1738 RKALAKMHQQLTECSGKIRRLRDEV-------TTIRAKMTETILSKASIIACTLSKAGSG 1790
Query: 584 HSVEIK-PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGF 642
E+K + L+IDEAAQ E + +P++ + VL+GD QLPA V+S ++ +A +
Sbjct: 1791 DFSELKHGFDALIIDEAAQAVELSTLVPIR-ERVARVVLVGDPKQLPATVKSVVAAKARY 1849
Query: 643 GRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYE--KQYLT 700
RSLFER+ + +L +QYRMHP + FP+ +FY + DG +V + +
Sbjct: 1850 DRSLFERIAESGVAPSMLRVQYRMHPFLRDFPSRRFYGGMLTDGPSVMERVQKVCPGVYA 1909
Query: 701 GTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQ-KVSIGVVSPY 759
T F + ++ RE+ + S N VE + + + Q +++ + K S+G VSPY
Sbjct: 1910 RTSFQPFLLYDVENSREEDMNGSKYNRVEAAFCVSLCQNMFECCADVRNNKWSVGFVSPY 1969
Query: 760 TAQVVAIRKKIGFEYENKDGF----TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFIS 815
QV +R++I + G +++V ++DGFQG E+D+I+ S VR + G IGF+
Sbjct: 1970 KEQVRVLRQEI-----TRSGIPASVSIEVNTVDGFQGREKDVIVFSCVRSSKRGGIGFLR 2024
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKA-RL 874
+R+NVA+TRAR CL+++G+ TL+ E+ W ALV A+ R+ ++ + A A RL
Sbjct: 2025 DIRRLNVAITRARFCLYVVGNVNTLVRDET-WAALVKSARDRRLIIRSEGDSFPAVAKRL 2083
Query: 875 EVSK 878
E K
Sbjct: 2084 ESDK 2087
>gi|77552196|gb|ABA94993.1| hypothetical protein LOC_Os11g42900 [Oryza sativa Japonica Group]
Length = 1133
Score = 182 bits (463), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 207/413 (50%), Gaps = 12/413 (2%)
Query: 447 RERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELE 506
+E+ V + C I L +S + + + L S L + + ++ +E
Sbjct: 515 KEKVCALAVDVEKCSRILIDSLSDILLSNYNIEILNKLLSGLSHLEDRIKNSDITQSGVE 574
Query: 507 KLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFC 566
K F + SW V + +L++ R CL ++ + NS++ LP + LE+FC
Sbjct: 575 KEFGLASGIDFSWEEVGCN-VAELNEIRMTCLGLIEVVMNSIE---LPQLDDRKDLEEFC 630
Query: 567 FKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDEC 626
+ + + T S +L +++ ++ L++D+AAQ+KE + IPL + H V+ GD
Sbjct: 631 IRHSRIIICTPVCSSQLRELKLDTIDILLVDDAAQIKEIDMLIPLSFSP-RHIVMFGDHL 689
Query: 627 QLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG 686
L MV+S++ EAG+ SLF+RL + L QY M PSIS F + FY ++ D
Sbjct: 690 HLQPMVKSEVCKEAGYASSLFQRLMHSSSENKRLTKQYMMDPSISQFVSENFYEGRLKDD 749
Query: 687 ANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVG 746
+ VKS Y K L Y F +I G D + + VE S ++ +LQ L K
Sbjct: 750 STVKSDDYNK-LLKEFPVPAYGFFDISG--VDELTGKGKGFVESSVIMFLLQFLCKGRTN 806
Query: 747 SKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCN 806
+ K+++G++ Y ++ A+R +G +YEN D ++V S+ D++I+S+V
Sbjct: 807 AIGKINVGIICLYNNRMDALRNLLGIKYENHDRINIEVNSLGNLHEKWYDVVILSSV--- 863
Query: 807 TGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQC 859
+ + ++NVA +R+R+CLWI+G + LI+SE +W L+ AK C
Sbjct: 864 -SDEKAELLEGSKMNVAFSRSRYCLWIIGEGKNLIASEDLWKKLIGYAKNLHC 915
>gi|15224719|ref|NP_179502.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
gi|3176714|gb|AAD12029.1| putative DNA2-NAM7 helicase family protein [Arabidopsis thaliana]
gi|330251755|gb|AEC06849.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
Length = 1090
Score = 182 bits (462), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/313 (38%), Positives = 164/313 (52%), Gaps = 12/313 (3%)
Query: 558 SKLVLEDFCFKRASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGI 616
++ LE A + F+T SSS KL S + +VIDEAAQ E PL L G
Sbjct: 741 ARASLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLAL-GA 799
Query: 617 NHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNL 676
VL+GD QLPA V SK + + RSLFER LL +QYRMHP I FP+
Sbjct: 800 ARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSR 859
Query: 677 QFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSC--RNIVEVSAVI 734
FY+ ++ D ++ S E Y Y F NI GRE S N+ E +
Sbjct: 860 YFYQGRLKDSESISSAPDEI-YYKDPVLRPYLFFNISHGRESHRGGSVSYENVDEARFCV 918
Query: 735 KI---LQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQ 791
+ LQK K+ KVS+GV++PY Q+ ++ + G + + + ++D FQ
Sbjct: 919 GVYMHLQKTLKSLGAG--KVSVGVITPYKLQLKCLKHEFGNALGQDELKEIYINTVDAFQ 976
Query: 792 GGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
G E D+II+S VR +G +GF+S +R+NVALTRAR LW++G+ L+ SE W AL+
Sbjct: 977 GQERDVIIMSCVRA-SGHGVGFVSDIRRMNVALTRARRALWVMGNASALMKSED-WAALI 1034
Query: 852 CDAKARQCFFNAD 864
DA+ R CF D
Sbjct: 1035 SDARGRNCFMEMD 1047
>gi|356522392|ref|XP_003529830.1| PREDICTED: probable helicase senataxin-like [Glycine max]
Length = 1388
Score = 182 bits (461), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/314 (36%), Positives = 175/314 (55%), Gaps = 14/314 (4%)
Query: 558 SKLVLEDFCFKRASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGI 616
++ LE A + F+T SSS KL S + +VIDEAAQ E PL L G
Sbjct: 945 ARASLEASFANEAEVVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAILPPLSL-GA 1003
Query: 617 NHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNL 676
VL+GD QLPA V SK + + RSLFER LL++QYRMHP I FP+
Sbjct: 1004 ARCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFPSR 1063
Query: 677 QFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSC--RNIVEVSAVI 734
FY+ ++ D +V +K ++ Y Y F +I GRE S +NI E +
Sbjct: 1064 YFYQGRLTDSESV-AKLPDEPYYKDPLLRPYIFYDIRHGRESHRGGSVSYQNIHEAQFCL 1122
Query: 735 KILQKLYKA----WVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGF 790
++ + + K VG K+++G+++PY Q+ ++++ +++G + + ++D F
Sbjct: 1123 RLYEHVQKTVKSLGVG---KITVGIITPYKLQLKCLQREFDEVLNSEEGKDLYINTVDAF 1179
Query: 791 QGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGAL 850
QG E D+II+S VR ++ G +GF++ +R+NVALTRAR LW++G+ L+ SE W AL
Sbjct: 1180 QGQERDVIIMSCVRASSHG-VGFVADIRRMNVALTRARRALWVMGNANALLQSED-WAAL 1237
Query: 851 VCDAKARQCFFNAD 864
+ DAK+R C+ + D
Sbjct: 1238 INDAKSRNCYMDMD 1251
>gi|184160102|gb|ACC68168.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis halleri subsp. halleri]
Length = 1054
Score = 182 bits (461), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/318 (37%), Positives = 165/318 (51%), Gaps = 10/318 (3%)
Query: 552 NLPCTTSKLVLEDFCFKRASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIP 610
N ++ LE A + F+T SSS KL S + +VIDEAAQ E P
Sbjct: 723 NFNLDEARASLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPP 782
Query: 611 LQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSI 670
L L G VL+GD QLPA V SK + + RSLFER LL +QYRMHP I
Sbjct: 783 LAL-GAARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQI 841
Query: 671 SLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSC--RNIV 728
FP+ FY+ ++ D ++ S E Y Y F NI GRE S N+
Sbjct: 842 RDFPSRYFYQGRLKDSESISSAPDEI-YYKDPVLRPYLFFNISHGRESHRGGSVSYENVD 900
Query: 729 EVSAVIKILQKLYKA--WVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKS 786
E + + L K +G+ KVS+GV++PY Q+ ++ + G + + + +
Sbjct: 901 EARFCVGVYMHLQKTLKLLGAG-KVSVGVITPYKLQLKCLKHEFGNALGQDELKEIYINT 959
Query: 787 IDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESI 846
+D FQG E D+II+S VR +G +GF+S +R+NVALTRAR LW++G+ L+ SE
Sbjct: 960 VDAFQGQERDVIIMSCVRA-SGHGVGFVSDIRRMNVALTRARRALWVMGNASALMKSED- 1017
Query: 847 WGALVCDAKARQCFFNAD 864
W AL+ DA+ R CF D
Sbjct: 1018 WAALITDARGRNCFMEMD 1035
>gi|328862576|gb|EGG11677.1| hypothetical protein MELLADRAFT_33290 [Melampsora larici-populina
98AG31]
Length = 349
Score = 181 bits (460), Expect = 3e-42, Method: Composition-based stats.
Identities = 110/314 (35%), Positives = 179/314 (57%), Gaps = 11/314 (3%)
Query: 553 LPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIP 610
L T KL ++ + A + ST S S + ++ P +F +VIDEA Q E S IP
Sbjct: 22 LDAATRKLRMQ--ILQDADVICSTLSGSGHDYMSQL-PFDFETVVIDEACQCTEPASLIP 78
Query: 611 LQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSK-HLLNIQYRMHPS 669
L+ +L+GD QLP V S+ + +AG+ +SLF R+ + HLL+IQYRMHP+
Sbjct: 79 LRYNA-TQCILVGDPLQLPPTVLSQAASKAGYDQSLFVRMQRFAPTAVHLLSIQYRMHPA 137
Query: 670 ISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDF-IYHSCRNIV 728
IS FP+ FY ++++DG ++ S++ ++ + T F Y+F + IG RE+ +HS N
Sbjct: 138 ISAFPSKAFYDSRLMDGPDMASRTTQRWHTEDTFFPPYTFYHPIGAREERGRHHSFINRT 197
Query: 729 EVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSID 788
E + I +L + + +G+++ Y QV IR++ + T+ + ++D
Sbjct: 198 EAGMTVAIYSRLTRTFPDIDFAYRVGIITAYAGQVGEIRRQFRQSFPADVVSTLDINTVD 257
Query: 789 GFQGGEEDIIIISTVRC--NTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESI 846
GFQG E+DIII+S VR + IGF+ +R+NVALTRA+ L+++G++ L+ ++
Sbjct: 258 GFQGQEKDIIILSCVRGGKDDDNGIGFLKDTRRMNVALTRAKSSLFVIGNQSALVQDKN- 316
Query: 847 WGALVCDAKARQCF 860
W AL+ DA+ R F
Sbjct: 317 WKALIDDARERGTF 330
>gi|111219429|ref|XP_646844.2| hypothetical protein DDB_G0268924 [Dictyostelium discoideum AX4]
gi|90970905|gb|EAL73051.2| hypothetical protein DDB_G0268924 [Dictyostelium discoideum AX4]
Length = 1772
Score = 181 bits (460), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/288 (38%), Positives = 169/288 (58%), Gaps = 20/288 (6%)
Query: 569 RASLFFSTASSSYKLHSVEIKPLNF----LVIDEAAQLKESESTIPLQLAGINHAVLIGD 624
RAS+ FST S S E NF +++DE+ Q E S IPL + I +L+GD
Sbjct: 1357 RASIVFSTLSGS----GSETVKNNFRADIILVDESTQSTEPSSIIPLCIGNIEKLILVGD 1412
Query: 625 ECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQIL 684
QLP + S S E G SLFERL+ + +L++QYRMHP+IS FP+ QFYR+++L
Sbjct: 1413 PLQLPPTIFSTESAENGLNISLFERLSKV-LPVEMLHVQYRMHPTISRFPSNQFYRDRLL 1471
Query: 685 DGANVKSKSYEKQ-YLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKA 743
DG NVKS Y + + + ++G F ++I +E+ S +N +E++ V +++KL +
Sbjct: 1472 DGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKRSLKNKLEITMVFTLIKKLVQD 1531
Query: 744 WVGSKQKVSIGVVSPYTAQVVAIRKK-IGFEYENKDGFTVKVKSIDGFQGGEEDIIIIST 802
+ K K S G+++PY Q I+++ F Y ++ +IDGFQG E+DIII+S
Sbjct: 1532 YPECK-KFSFGIITPYKLQKSEIKEQHKQFNY----PLNIETSTIDGFQGSEKDIIILSC 1586
Query: 803 VRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGAL 850
VR IGF+S +R+NVALTRA+ L+++G+ + L+ + WG
Sbjct: 1587 VRSE---RIGFLSDRRRINVALTRAKFGLFVIGNSK-LLKKDRTWGPF 1630
Score = 51.6 bits (122), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 23/154 (14%)
Query: 180 RNNMQVHDKTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVI-TQVLGT-----DSVVDER 233
+N ++ + K+ +FI ++N + R N++ N ++ Q+L D + +R
Sbjct: 1169 KNYLKDSNTIKEKLYFIKVSNCITFIRELNAIKDFRNSGILFDQILQPSRKDHDILSSKR 1228
Query: 234 CELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTK 293
+ S+ R E LN SQ ++ L G+ LI GPPGTGKT
Sbjct: 1229 MAIPSLLRSMCIQE---------LNTSQFNSIETSL------STKGITLIQGPPGTGKTT 1273
Query: 294 TVSMLLLTLLRI--KCRTLACTPTNVAITELASR 325
T+ LL LL I + + L C P++ ++ E+A R
Sbjct: 1274 TIYYLLSILLAINPEFKILVCGPSHASVDEIAKR 1307
>gi|356558781|ref|XP_003547681.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
[Glycine max]
Length = 1328
Score = 181 bits (459), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/311 (36%), Positives = 173/311 (55%), Gaps = 8/311 (2%)
Query: 558 SKLVLEDFCFKRASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGI 616
++ LE A + F+T SSS KL S + +VIDEAAQ E PL L G
Sbjct: 911 ARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAILPPLSL-GA 969
Query: 617 NHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNL 676
VL+GD QLPA V SK + + RSLFER LL++QYRMHP I FP+
Sbjct: 970 ARCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFPSR 1029
Query: 677 QFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSC--RNIVEVSAVI 734
FY+ ++ D +V +K ++ Y Y F +I GRE S +NI E +
Sbjct: 1030 YFYQGRLTDSESV-AKLPDEPYYKDPLLRPYIFYDIRHGRESHRGGSVSYQNIHEAQFCL 1088
Query: 735 KILQKLYKAWVG-SKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGG 793
++ + + K K+++G+++PY Q+ ++++ +++G + + ++D FQG
Sbjct: 1089 RLYEHVQKTVKSLGLGKITVGIITPYKLQLKCLQREFDEVLNSEEGKDLYINTVDAFQGQ 1148
Query: 794 EEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCD 853
E D+II+S VR ++ G +GF++ +R+NVALTRAR LW++G+ L+ SE W AL+ D
Sbjct: 1149 ERDVIIMSCVRASSHG-VGFVADIRRMNVALTRARRALWVMGNANALLQSED-WAALIND 1206
Query: 854 AKARQCFFNAD 864
AK+R C+ + D
Sbjct: 1207 AKSRNCYMDMD 1217
>gi|347832212|emb|CCD47909.1| similar to similar to tRNA-splicing endonuclease [Botryotinia
fuckeliana]
Length = 2019
Score = 180 bits (456), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 161/274 (58%), Gaps = 7/274 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G +L+GD QLP V S+++ G+ +SLF R+
Sbjct: 1576 VIIDEAAQCIELSALIPLKY-GATKCILVGDPEQLPPTVLSRLAKSYGYEQSLFVRMQR- 1633
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH HLL+ QYRMHP IS FP+ QFY ++++DG + + + + G Y F +
Sbjct: 1634 NHPDDVHLLDTQYRMHPEISRFPSQQFYNSRLIDGDGMAQLRVQPWHASSI-LGPYRFFD 1692
Query: 712 IIGGR-EDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
++G + ++ HS N+ E++A I++ Q+L + + IG+++ Y AQ+ ++++
Sbjct: 1693 VVGVQSKEARGHSLINVPELNAAIQLYQRLKTDYRSYDFRGKIGIITTYKAQLNELKRRF 1752
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
G ++ ++ ++ + D FQG E +III S VR G IGF++ +R+NV LTRA+
Sbjct: 1753 GAKFGDEIFEEIEFNTTDAFQGREREIIIFSCVRAKAAGGIGFLNDIRRMNVGLTRAKSS 1812
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
LW+LG R L E W L+ DAK+R+ + + D
Sbjct: 1813 LWVLGDSRALEQGE-FWNRLIQDAKSRERYTSGD 1845
>gi|154291609|ref|XP_001546386.1| hypothetical protein BC1G_15073 [Botryotinia fuckeliana B05.10]
Length = 2019
Score = 180 bits (456), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 161/274 (58%), Gaps = 7/274 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G +L+GD QLP V S+++ G+ +SLF R+
Sbjct: 1576 VIIDEAAQCIELSALIPLKY-GATKCILVGDPEQLPPTVLSRLAKSYGYEQSLFVRMQR- 1633
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH HLL+ QYRMHP IS FP+ QFY ++++DG + + + + G Y F +
Sbjct: 1634 NHPDDVHLLDTQYRMHPEISRFPSQQFYNSRLIDGDGMAQLRVQPWHASSI-LGPYRFFD 1692
Query: 712 IIGGR-EDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
++G + ++ HS N+ E++A I++ Q+L + + IG+++ Y AQ+ ++++
Sbjct: 1693 VVGVQSKEARGHSLINVPELNAAIQLYQRLKTDYRSYDFRGKIGIITTYKAQLNELKRRF 1752
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
G ++ ++ ++ + D FQG E +III S VR G IGF++ +R+NV LTRA+
Sbjct: 1753 GAKFGDEIFEEIEFNTTDAFQGREREIIIFSCVRAKAAGGIGFLNDIRRMNVGLTRAKSS 1812
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
LW+LG R L E W L+ DAK+R+ + + D
Sbjct: 1813 LWVLGDSRALEQGE-FWNRLIQDAKSRERYTSGD 1845
>gi|156056478|ref|XP_001594163.1| hypothetical protein SS1G_05593 [Sclerotinia sclerotiorum 1980]
gi|154703375|gb|EDO03114.1| hypothetical protein SS1G_05593 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 2021
Score = 180 bits (456), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 172/304 (56%), Gaps = 10/304 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G +L+GD QLP V S+++ G+ +SLF R+
Sbjct: 1575 VIIDEAAQCIELSALIPLKY-GATKCILVGDPEQLPPTVLSRLAKSYGYEQSLFVRMQR- 1632
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH K HLL+ QYRMHP IS FP+ QFY ++++DG + + + + G Y F +
Sbjct: 1633 NHPKDVHLLDTQYRMHPEISQFPSQQFYNSRLIDGDGMAQLRVQPWHASSI-LGPYRFFD 1691
Query: 712 IIGGR-EDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
++G + ++ HS N+ E++A I++ Q+L + + IG+++ Y AQ+ ++++
Sbjct: 1692 VVGVQSKETKGHSLINVPELNAAIQLYQRLKTDYRSYDFRGKIGIITTYKAQLNELKRRF 1751
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
G ++ ++ ++ + D FQG E +III S VR G IGF++ +R+NV LTRA+
Sbjct: 1752 GAKFGDEIFEEIEFNTTDAFQGREREIIIFSCVRAKAAGGIGFLNDIRRMNVGLTRAKSS 1811
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAESLTS 890
LW+LG R L E W L+ DA++R + + D L+K SK+ I L+S
Sbjct: 1812 LWVLGDSRALEQGE-FWNRLIQDARSRSRYTSGDIMGLLSKP---TSKDAPVIDYSQLSS 1867
Query: 891 TSQG 894
G
Sbjct: 1868 NVNG 1871
>gi|260950507|ref|XP_002619550.1| hypothetical protein CLUG_00709 [Clavispora lusitaniae ATCC 42720]
gi|238847122|gb|EEQ36586.1| hypothetical protein CLUG_00709 [Clavispora lusitaniae ATCC 42720]
Length = 1970
Score = 180 bits (456), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 116/345 (33%), Positives = 189/345 (54%), Gaps = 19/345 (5%)
Query: 562 LEDFCFKRASLFFSTASSSYK--LHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHA 619
L+ A + ST S S L S+ +K + ++IDEA Q E + IPL+ G
Sbjct: 1467 LQAKILSEAQVICSTLSGSAHDFLASMSMK-FDQVIIDEACQCVELSAIIPLRY-GCKKC 1524
Query: 620 VLIGDECQLPAMVESKISDEAGFGRSLFERLTSLN-HSKHLLNIQYRMHPSISLFPNLQF 678
+++GD QLP V S+ + + SLF R+ N S +LL++QYRMHP IS FP+ QF
Sbjct: 1525 IMVGDPNQLPPTVLSQKAASFKYEESLFVRMQRTNPESVYLLDVQYRMHPQISKFPSAQF 1584
Query: 679 YRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGR--EDFIYHSCRNIVEVSAVIKI 736
Y++++ DG ++ K+ + + Y F +I GGR ++ S N E +++
Sbjct: 1585 YKSKLTDGPHMMEKN-NRPWHADFPLSPYRFFDI-GGRHQQNVQTKSFFNPSEAKVALEL 1642
Query: 737 LQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEED 796
++KL + K + IG++SPY Q+ ++ +Y N + ++DGFQG E++
Sbjct: 1643 VEKLMQILPQDKFRGRIGIISPYKEQIRTLKDTFVRKYGNLILNEIDFNTVDGFQGQEKE 1702
Query: 797 IIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKA 856
III+S VR + GS+GF+S +R+NVALTRAR LWILG++++L + IW L+ DA++
Sbjct: 1703 IIIMSCVRASESGSVGFLSDVRRMNVALTRARTTLWILGNKQSL-RRDKIWSKLIADAES 1761
Query: 857 RQCFFNADEERNLAKARLEVSKELVEIGAESLTSTSQGGKKEEFE 901
R C +A+ K + + G S ++++ G +E E
Sbjct: 1762 RDCVTSAEP---------GFLKRIFKTGQPSQSTSNANGSQESPE 1797
>gi|110740248|dbj|BAF02022.1| hypothetical protein [Arabidopsis thaliana]
Length = 466
Score = 179 bits (455), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/310 (37%), Positives = 167/310 (53%), Gaps = 12/310 (3%)
Query: 558 SKLVLEDFCFKRASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGI 616
++ LE A + F+T SSS KL S + +VIDEAAQ E PL L G
Sbjct: 59 ARASLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLAL-GA 117
Query: 617 NHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNL 676
VL+GD QLPA V SK + + RSLFER LL +QYRMHP I FP+
Sbjct: 118 ARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSR 177
Query: 677 QFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSC--RNIVEVSAVI 734
FY+ ++ D +V S + ++ Y + Y F +I GRE S NI E +
Sbjct: 178 YFYQGRLTDSESV-STAPDEIYYKDSVLKPYLFFDISHGRESHRGGSVSYENIDEARFCV 236
Query: 735 KI---LQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQ 791
+ LQ+ K+ G KVS+GV++PY Q+ ++ + G + + + ++D FQ
Sbjct: 237 GVYLHLQRTLKSLGGG--KVSVGVITPYKLQLKCLKIEFGNALSQDELQEIYINTVDAFQ 294
Query: 792 GGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
G E D+II+S VR + G +GF++ +R+NVALTRA+ LW++G+ L+ E W AL+
Sbjct: 295 GQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRAKRALWVMGNASALMKCED-WAALI 352
Query: 852 CDAKARQCFF 861
DAKAR CF
Sbjct: 353 TDAKARNCFM 362
>gi|184160087|gb|ACC68154.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis halleri subsp. halleri]
Length = 1071
Score = 179 bits (455), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 163/313 (52%), Gaps = 12/313 (3%)
Query: 558 SKLVLEDFCFKRASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGI 616
++ LE A + F+T SSS KL S + +VIDEAAQ E PL L G
Sbjct: 729 ARASLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLAL-GA 787
Query: 617 NHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNL 676
VL+GD QLPA V SK + + RSLFER LL +QYRMHP I FP+
Sbjct: 788 ARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSR 847
Query: 677 QFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSC--RNIVEVSAVI 734
FY+ ++ D ++ S E Y Y F NI GRE S N+ E +
Sbjct: 848 YFYQGRLKDSESISSAPDEI-YYKDPVLRPYLFFNISHGRESHRGGSVSYENVDEARFCV 906
Query: 735 KI---LQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQ 791
+ LQK K+ KVS+GV++PY Q+ ++ + G + + + ++D FQ
Sbjct: 907 GVYMHLQKTLKSLGAG--KVSVGVITPYKLQLKCLKHEFGNALGQDELKEIYINTVDAFQ 964
Query: 792 GGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
G E D+II+S VR +G +GF+S +R+NVALTRAR LW++G+ L+ SE W AL+
Sbjct: 965 GQERDVIIMSCVRA-SGHGVGFVSDIRRMNVALTRARRALWVMGNASALMKSED-WAALI 1022
Query: 852 CDAKARQCFFNAD 864
DA+ R C D
Sbjct: 1023 TDARGRNCVMEMD 1035
>gi|449549000|gb|EMD39966.1| hypothetical protein CERSUDRAFT_150792 [Ceriporiopsis subvermispora
B]
Length = 1925
Score = 179 bits (455), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 175/321 (54%), Gaps = 10/321 (3%)
Query: 549 DELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESEST 608
D L T K E + A + ST S S + E+ + ++IDEAAQ E S
Sbjct: 1485 DSRTLDATRRKFRAE--VLREADVICSTLSGSAYEYLEELD-FDLIIIDEAAQSIELSSL 1541
Query: 609 IPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHS-KHLLNIQYRMH 667
IPL+ + V++GD QLP V+S+ + + G+ +SLF RL N + HLL+IQYRMH
Sbjct: 1542 IPLKYR-CSRCVMVGDPQQLPPTVKSQEACKFGYDQSLFVRLHKQNSNVAHLLSIQYRMH 1600
Query: 668 PSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIY---HSC 724
P IS P+ FY ++ DG ++ K+ + + + +FGTY F N+ GRE+ + HS
Sbjct: 1601 PDISRLPSQLFYNKRLQDGPDMAVKT-RRPWHSHPKFGTYRFFNVGEGREEAGHGGGHSL 1659
Query: 725 RNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKV 784
N E + + +L + + +G++S Y Q+ +R+ + + T+
Sbjct: 1660 VNRSEAQVAVALYNRLRQEFKAFDFDFKVGIISMYRGQIWELRRVFEQRFGSDITGTIDF 1719
Query: 785 KSIDGFQGGEEDIIIISTVRCNTG-GSIGFISKPQRVNVALTRARHCLWILGSERTLISS 843
++DGFQG E+D+II+S VR G S+GF+ +R+NVALTRA+ L++LG TL S
Sbjct: 1720 NTVDGFQGQEKDVIILSCVRAGPGVTSVGFLRDIRRMNVALTRAKSSLFVLGHASTLERS 1779
Query: 844 ESIWGALVCDAKARQCFFNAD 864
+ +W +V DA+ R C + D
Sbjct: 1780 DDVWRDIVVDARTRSCLADTD 1800
Score = 45.4 bits (106), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 53/127 (41%), Gaps = 35/127 (27%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCR-------- 308
+NE Q A+L G L+ GPPGTGKT T+ L+ L + R
Sbjct: 1280 VNEPQARAILNAF------AVQGFSLVQGPPGTGKTSTICGLVHAFLSRRPRPVTAVTIG 1333
Query: 309 -------------TLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGN 355
L C P+N AI E+A R+ + V + +R ICP ++ GN
Sbjct: 1334 RTAGPADKEPAKKVLLCAPSNAAIDEIAHRLKEGVSGAGRRS------ICP--QVVRVGN 1385
Query: 356 KDRLKVN 362
+ + V+
Sbjct: 1386 SNSMNVS 1392
>gi|15234617|ref|NP_194739.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
gi|4938486|emb|CAB43845.1| putative protein [Arabidopsis thaliana]
gi|7269910|emb|CAB81003.1| putative protein [Arabidopsis thaliana]
gi|332660321|gb|AEE85721.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
Length = 1311
Score = 179 bits (454), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/310 (37%), Positives = 167/310 (53%), Gaps = 12/310 (3%)
Query: 558 SKLVLEDFCFKRASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGI 616
++ LE A + F+T SSS KL S + +VIDEAAQ E PL L G
Sbjct: 904 ARASLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLAL-GA 962
Query: 617 NHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNL 676
VL+GD QLPA V SK + + RSLFER LL +QYRMHP I FP+
Sbjct: 963 ARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSR 1022
Query: 677 QFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSC--RNIVEVSAVI 734
FY+ ++ D +V S + ++ Y + Y F +I GRE S NI E +
Sbjct: 1023 YFYQGRLTDSESV-STAPDEIYYKDSVLKPYLFFDISHGRESHRGGSVSYENIDEARFCV 1081
Query: 735 KI---LQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQ 791
+ LQ+ K+ G KVS+GV++PY Q+ ++ + G + + + ++D FQ
Sbjct: 1082 GVYLHLQRTLKSLGGG--KVSVGVITPYKLQLKCLKIEFGNALSQDELQEIYINTVDAFQ 1139
Query: 792 GGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
G E D+II+S VR + G +GF++ +R+NVALTRA+ LW++G+ L+ E W AL+
Sbjct: 1140 GQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRAKRALWVMGNASALMKCED-WAALI 1197
Query: 852 CDAKARQCFF 861
DAKAR CF
Sbjct: 1198 TDAKARNCFM 1207
>gi|353238887|emb|CCA70818.1| related to SEN1 protein [Piriformospora indica DSM 11827]
Length = 1917
Score = 179 bits (454), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/270 (38%), Positives = 158/270 (58%), Gaps = 6/270 (2%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
+ ++IDEAAQ E S IPL+ A +L+GD QLP V S+ + + G+ RSLF RL
Sbjct: 1520 FDLVIIDEAAQAIELSSLIPLKFAS-QRCILVGDPQQLPPTVLSQTATKMGYNRSLFVRL 1578
Query: 651 T-SLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSF 709
S+ HLL+IQYRMHP IS P++ FY ++ DG ++ K+ + + + G Y
Sbjct: 1579 QDSMPDRIHLLSIQYRMHPEISRLPSVLFYERKLQDGPDMAVKT-RRPWHDDSNLGVYRL 1637
Query: 710 INIIGGREDF-IYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
+I G E + +S N+ EV A +++ ++L A + + +V+IG++S Y AQ+ +R
Sbjct: 1638 FDIRGNEEQADLGYSQYNLAEVKAALELYKRL-SATLRTPTEVTIGIISMYRAQLTKLRD 1696
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG-GSIGFISKPQRVNVALTRA 827
Y + V ++DGFQG E+D+II+S VR SIGF+S +R+NVA+TR
Sbjct: 1697 AFIARYGREILSKVDFNTVDGFQGQEKDVIILSCVRAGPNVSSIGFLSDARRINVAITRC 1756
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKAR 857
R L+ILG TL S+ +W ++ DA +R
Sbjct: 1757 RSSLFILGDAATLRRSDQLWSKIIEDANSR 1786
Score = 50.1 bits (118), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 59/143 (41%), Gaps = 31/143 (21%)
Query: 227 DSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGP 286
DSV+ R E S + + LN Q A+L+ L H G LI GP
Sbjct: 1255 DSVLQARLEPHSAPTEESISRTMA---AQKLNYPQARAVLSSL------HTRGFSLIQGP 1305
Query: 287 PGTGKTKTVSMLLLTLLR------------------IKCRTLACTPTNVAITELASRVLK 328
PGTGKT T+ L+ L I + L C P+N AI E+A R+ +
Sbjct: 1306 PGTGKTSTICGLVGAFLSSRDSATTSITVGGPSQKPIPRKVLVCAPSNAAIDEVARRIHE 1365
Query: 329 LVKESYKRDSRSNTP-ICPLGDI 350
V +K D + P + LG I
Sbjct: 1366 GV---WKSDGQRTRPQVVRLGPI 1385
>gi|242034805|ref|XP_002464797.1| hypothetical protein SORBIDRAFT_01g026860 [Sorghum bicolor]
gi|241918651|gb|EER91795.1| hypothetical protein SORBIDRAFT_01g026860 [Sorghum bicolor]
Length = 372
Score = 179 bits (454), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/277 (38%), Positives = 156/277 (56%), Gaps = 11/277 (3%)
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS 652
+VIDEAAQ E PL L G VL+GD QLPA V SK + + RSLFER
Sbjct: 1 MVVIDEAAQASEVGVLPPLAL-GAARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQQ 59
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
LL++QYRMHP I FP+ FY+ ++ D +V E Y Y F ++
Sbjct: 60 AGCPTILLSVQYRMHPQIREFPSKYFYQGRLTDSESVVQLPDEAYYRDAL-MAPYIFYDM 118
Query: 713 IGGREDFIYHSC--RNIVEVSAVIKI---LQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
GRE S +NI E +++ LQK KA +KVS+G+++PY Q+ ++
Sbjct: 119 SHGRESHRGGSSSYQNIHEAQFALRLYEHLQKFLKA--NGAKKVSVGIITPYKLQLKCLQ 176
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
++ ++G + + ++D FQG E D+II+S VR + G +GF++ +R+NVALTRA
Sbjct: 177 REFKDVMNTEEGKDIYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRA 235
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
R LW++G+ L+ SE W +L+ DAKAR+CF + D
Sbjct: 236 RRALWVVGNANALMQSED-WASLIADAKARKCFMDLD 271
>gi|50303681|ref|XP_451783.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640915|emb|CAH02176.1| KLLA0B05555p [Kluyveromyces lactis]
Length = 1997
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 172/286 (60%), Gaps = 17/286 (5%)
Query: 583 LHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGF 642
L S+ +K + ++IDEA Q E S IPL+ G +++GD QLP V S + + +
Sbjct: 1571 LASLGVK-FDTIIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASDMKY 1628
Query: 643 GRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVK---SKSYEKQYL 699
+SLF R+ N S +LL++QYRMHP+IS FP+L+FY+ ++ DG++V+ ++ + K+Y
Sbjct: 1629 NQSLFVRMQK-NCSPYLLDVQYRMHPAISKFPSLEFYKGKLQDGSSVQEVNTRDWHKKY- 1686
Query: 700 TGTEFGTYSFINIIGG--REDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS--IGV 755
FG Y F +I+ G +++ S N E I++++ L + SK + IG+
Sbjct: 1687 ---PFGPYKFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENLLATY-ESKYDFTNRIGI 1742
Query: 756 VSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGG-SIGFI 814
+SPY Q+ +R + + ++ + +IDGFQG E+DIIIIS VR + S+GF+
Sbjct: 1743 ISPYREQMQNMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDIIIISCVRADDNSTSVGFL 1802
Query: 815 SKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
+R+NVALTRA+ LWILG ++L++++ +W L+ DAK R C
Sbjct: 1803 KDFRRMNVALTRAKCSLWILGHHKSLVNNK-LWKHLISDAKERNCL 1847
>gi|242061502|ref|XP_002452040.1| hypothetical protein SORBIDRAFT_04g017402 [Sorghum bicolor]
gi|241931871|gb|EES05016.1| hypothetical protein SORBIDRAFT_04g017402 [Sorghum bicolor]
Length = 553
Score = 178 bits (451), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 203/430 (47%), Gaps = 75/430 (17%)
Query: 21 KKAVGFAGHTVFSWSLEDIFSQSFFKD---------------------QVEKIPESFQSV 59
K + + + VFSWS+ DIF++ ++ QV++IP++F S
Sbjct: 19 KFGLSYLDNQVFSWSVRDIFNRDLLRNKVPIARLFSLNSTKRPSGYSLQVKRIPDTFTSF 78
Query: 60 KQYFGSFVFPLLEETRMQLRSGLEAMRRAPYAQVIAFEELKPYGTNQYGIEVDYWRNTIS 119
Y SF +PL+EE + S L+ +A + QV L + G +V
Sbjct: 79 GSYLDSFTWPLIEELHADIFSSLDGYSQANFIQVTQVGNLDASKSTILGFQVA--EPMKD 136
Query: 120 NSGKEPYKTLPGDILVLADFKPEKVS-DLRRVGRTWTFVSVTT-VPDDEDENKKENRYKV 177
+E Y DI+VL+ KP+ V+ + W V +++ +P + D + K
Sbjct: 137 EKSRETYVPAENDIIVLSSHKPKHVTGEEDGFPPGWCVVHLSSAIPVEADRHTK------ 190
Query: 178 KARNNMQVHDKTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSV-------- 229
K+ F +YL N+ RIW L + N + ++ S+
Sbjct: 191 ----------IPKRPLFLVYLINMKTYNRIWRCLLLGQNCSNLVELQNKKSIGPVTNVWQ 240
Query: 230 -----VDERCELCSVQRKGQWDE-----KFGPSFSSTLNESQVGAMLACLRRLDCGHRSG 279
V +C S G+ E KFG LN+SQ+ A+ C+ +D S
Sbjct: 241 FKPKAVSSQCSQPSRLFDGRLIECLGLEKFG------LNDSQLNAVADCVSLMD-SDSSS 293
Query: 280 VELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSR 339
++L+WGPPGTGKTKT+S +L +L RTLAC TN A+ E+A+R++KL E
Sbjct: 294 IKLLWGPPGTGKTKTISSILWAMLIKGRRTLACASTNTAVLEIAARIVKLTVE------- 346
Query: 340 SNTPICPLGDILLFGNKDRLKVNPGF--EEIYLNYRIKKLRECFAPLSGWRHCFSSMIDL 397
S+ L DI+LFGNK ++K++ + ++YLN ++L CF +GWRHC S+IDL
Sbjct: 347 SSDGTVFLNDIVLFGNKKKMKLDNDYYLSKVYLNSCAERLLPCFKSNTGWRHCLCSLIDL 406
Query: 398 LEDCVSQYHI 407
L + V++Y +
Sbjct: 407 LVNSVTKYKL 416
>gi|255545656|ref|XP_002513888.1| splicing endonuclease positive effector sen1, putative [Ricinus
communis]
gi|223546974|gb|EEF48471.1| splicing endonuclease positive effector sen1, putative [Ricinus
communis]
Length = 1352
Score = 178 bits (451), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/315 (35%), Positives = 171/315 (54%), Gaps = 8/315 (2%)
Query: 552 NLPCTTSKLVLEDFCFKRASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIP 610
N ++ LE A + F+T SSS KL S + +VIDEAAQ E P
Sbjct: 934 NFNMEEARASLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVAVLPP 993
Query: 611 LQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSI 670
L L G VL+GD QLPA V SK + + RSLFER LL++QYRMHP I
Sbjct: 994 LAL-GAPRCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPQI 1052
Query: 671 SLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSC--RNIV 728
FP+ FY++++ D +V + E Y Y F ++ GRE S +N+
Sbjct: 1053 RDFPSRHFYQSRLTDSESVVNLPDE-MYYKDPLLRPYLFYDVTYGRESHRGGSVSFQNVH 1111
Query: 729 EVSAVIKILQKLYKAWVG-SKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSI 787
E ++ + L K ++S+G+++PY Q+ ++ + ++++G + + ++
Sbjct: 1112 EAQFCFQLYEHLQKTLKSLGLGRISVGIITPYKLQLKCLQHEFAAILKSEEGKDIYINTV 1171
Query: 788 DGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIW 847
D FQG E D+II+S VR + S+GF++ +R+NVALTRAR LW++G+ +L+ S+ W
Sbjct: 1172 DAFQGQERDVIIMSCVRA-SNHSVGFVADIRRMNVALTRARRALWVMGNANSLVKSDD-W 1229
Query: 848 GALVCDAKARQCFFN 862
AL+ DAKAR C+ +
Sbjct: 1230 AALIDDAKARNCYMD 1244
>gi|302689419|ref|XP_003034389.1| hypothetical protein SCHCODRAFT_52671 [Schizophyllum commune H4-8]
gi|300108084|gb|EFI99486.1| hypothetical protein SCHCODRAFT_52671 [Schizophyllum commune H4-8]
Length = 1958
Score = 177 bits (450), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 106/282 (37%), Positives = 165/282 (58%), Gaps = 14/282 (4%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
++IDEAAQ E S IP + + +H VL+GDE QLP V S + + + +SLF RL
Sbjct: 1533 FQMIIIDEAAQAIELSSLIPFKFS-CSHCVLVGDEKQLPPTVISMQATKFRYNQSLFVRL 1591
Query: 651 TSLN-HSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSF 709
+ ++ +LL+IQYRMHPSIS P+ FY +++ DG ++++K+ ++ + +FG Y F
Sbjct: 1592 QRQSPNAVNLLSIQYRMHPSISALPSKVFYDSRLKDGPDMEAKT-KQPWQFDPKFGAYRF 1650
Query: 710 INIIGGREDFI-YHSCRNIVEVSAVIKILQKLYKAWVGSKQ-KVSIGVVSPYTAQVVAIR 767
N+ G ED S +NI E + + +L + S +G+++ Y Q+V +R
Sbjct: 1651 FNVFRGVEDRAGAKSSKNIAECEVAVALYSRLVTQFGSSGDFAAKVGIIAGYKGQIVELR 1710
Query: 768 KKIGFEYENKDGFTVKVK----SIDGFQGGEEDIIIISTVRCNTGGS-IGFISKPQRVNV 822
++ +EN+ G + K ++DGFQG E+D+II S VR TG + IGF+S +R+NV
Sbjct: 1711 RR----FENRFGRDITKKIAFNTVDGFQGQEKDVIIFSCVRAGTGTTNIGFMSDTRRMNV 1766
Query: 823 ALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
ALTRA+ L+ILG TL S+ W +V DA R+ + D
Sbjct: 1767 ALTRAKSSLFILGHADTLSRSDETWKQIVADANERKLMTDVD 1808
Score = 46.2 bits (108), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 20/85 (23%)
Query: 256 TLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL-----RI----- 305
++NE Q A+ + H G LI GPPGTGKT T+ L+ L RI
Sbjct: 1301 SVNEPQAVAITKSI------HTKGFSLIQGPPGTGKTSTICGLVSAYLYEANRRITRPME 1354
Query: 306 ----KCRTLACTPTNVAITELASRV 326
+ R L C P+N AI E+A R+
Sbjct: 1355 NDPNQPRILLCAPSNAAIDEVAFRL 1379
>gi|301112122|ref|XP_002905140.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262095470|gb|EEY53522.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1372
Score = 177 bits (450), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 179/346 (51%), Gaps = 14/346 (4%)
Query: 557 TSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGI 616
+++ LE A + F+T SS+ + LV+DEAAQ E + IP++ G
Sbjct: 870 STRQSLEVSFLDTAHIVFTTLSSAGVAALDASARYDVLVVDEAAQAVELSTIIPMKF-GS 928
Query: 617 NHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNL 676
VL+GD QL A V S+ S ++ + RSLFERL S H H+L QYR HP IS FP
Sbjct: 929 KQCVLVGDPQQLSATVFSRNSGQSLYERSLFERLESCEHPVHMLRTQYRSHPMISDFPRN 988
Query: 677 QFYRNQILDGANVKSKSYEKQYLT-GTEFGTYSFINIIGGREDFIYHSCR-NIVEVSAVI 734
FY ++ DG NVK Y K Y G F F N++ RE R N+ E +
Sbjct: 989 YFYGGKLQDGDNVKGDEYAKPYHNLGPAFMPLVFWNLLSSREKATKSVSRMNVGEAELAV 1048
Query: 735 KILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKK----IGFEYENKDGFTVKVKSIDGF 790
+ L + + +G+++PY+ Q+ +R + +G YE + V++ ++DGF
Sbjct: 1049 NLFLTLKNSCPPNAISGKVGMITPYSQQMDELRNRFRHALGERYEQE----VEINTVDGF 1104
Query: 791 QGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGAL 850
QG E+DIII+STVR + +GF++ +R+NVALTRA+ +++G E TL SS+ W AL
Sbjct: 1105 QGREKDIIILSTVRADPKAGVGFLNDIRRMNVALTRAKFACYVIGKENTLRSSKP-WSAL 1163
Query: 851 VCDAKARQCFFNADEER-NLAKAR-LEVSKELVEIGAESLTSTSQG 894
+ A C + + + NL + +E E S S QG
Sbjct: 1164 LDHAYNHHCIVHVESPKCNLLTLKPMERPSETSRNAGASSNSHHQG 1209
>gi|357154159|ref|XP_003576691.1| PREDICTED: uncharacterized protein LOC100835663 [Brachypodium
distachyon]
Length = 2045
Score = 177 bits (449), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 163/295 (55%), Gaps = 19/295 (6%)
Query: 591 LNFLVIDEAAQLKESESTIPLQL--AGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
+ +VIDEAAQ E + IPLQL + +++GD QLPA V S ++ + + S+FE
Sbjct: 1387 FDVVVIDEAAQALEPATLIPLQLLKSKGTKCIMVGDPKQLPATVMSGLASKFLYECSMFE 1446
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYS 708
RL + +L QYRMHP+IS FP+L FY N++LDG + KS + G Y
Sbjct: 1447 RLQRAGYPVIMLTKQYRMHPNISRFPSLHFYENKLLDGVQMAEKSAP--FHEHNHLGPYM 1504
Query: 709 FINIIGGRE----DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVV 764
F +I GRE + S N E A ++IL L + IG+++PY +Q+
Sbjct: 1505 FFDIADGRERSGTNAATQSLCNQYEADAALEILSFLKNRYPAEFSCRKIGIITPYRSQLS 1564
Query: 765 AIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC-NTGG---------SIGFI 814
+R + + + +++ ++DGFQG E DI+++STVR N+ G SIGF+
Sbjct: 1565 LLRSRFTSFFGPEIVAEMEINTVDGFQGREVDILVLSTVRASNSSGDRHHAGEARSIGFV 1624
Query: 815 SKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNL 869
+ +R+NVALTRAR LWI+G+ RTL + S W +LV +AK R F + + L
Sbjct: 1625 ADVRRMNVALTRARFSLWIVGNARTL-QTNSHWASLVQNAKERNMFISVERPYGL 1678
>gi|66827407|ref|XP_647058.1| hypothetical protein DDB_G0268914 [Dictyostelium discoideum AX4]
gi|60475110|gb|EAL73046.1| hypothetical protein DDB_G0268914 [Dictyostelium discoideum AX4]
Length = 4540
Score = 177 bits (449), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 114/298 (38%), Positives = 176/298 (59%), Gaps = 21/298 (7%)
Query: 559 KLVLEDFCFKRASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAG-- 615
K++LE +S+ FST S+S L KP N +++DEA Q E+ IPL L
Sbjct: 3666 KMILE-----HSSICFSTLSASGSNLVQSSFKP-NVVIVDEATQSCETSCIIPLSLGAKS 3719
Query: 616 INHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPN 675
+ +L+GD QLP + SK S G G SLFERL+ + +LN+QYRMHP IS FP+
Sbjct: 3720 MKKLILVGDPVQLPPTIFSKESIHCGLGISLFERLSKV-LPVSMLNVQYRMHPLISKFPS 3778
Query: 676 LQFYRNQILDGAN-VKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVI 734
QFY + + DG N V S +Y ++ ++G F ++ RE+ S +N +E++ V
Sbjct: 3779 SQFYHDILKDGDNVVSSDAYSLRFHENQDYGAIRFFDVTDSREERGKTSIKNQLEITMVF 3838
Query: 735 KILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKD-GFTVKVKSIDGFQGG 793
+++KL + +KQ S G+V+PY Q RK+I Y+ + +++K+ID FQG
Sbjct: 3839 TLIKKLTQDHPETKQ-YSFGIVTPYKLQ----RKEIEDAYKQLNLSLNIEIKTIDSFQGS 3893
Query: 794 EEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
E+DI+I+S VR SIGF+S +R+NV++TRA++ L+I+G+ TL+ + WG L+
Sbjct: 3894 EKDIMIMSCVR---NESIGFLSDRRRINVSITRAKYGLFIIGNA-TLLKLDRTWGELI 3947
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
Query: 253 FSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC--RTL 310
++ TLNESQ+ A+ L S + LI GPPGTGKT T++ L+ +L I + L
Sbjct: 3552 YNQTLNESQLAAINESLVH------SSITLIQGPPGTGKTHTITSLISIILAINPDFKIL 3605
Query: 311 ACTPTNVAITELASRVL 327
C P++ A+ E+A RV+
Sbjct: 3606 VCGPSHAAVDEVAKRVI 3622
>gi|361125646|gb|EHK97679.1| putative Helicase SEN1 [Glarea lozoyensis 74030]
Length = 1377
Score = 177 bits (449), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 173/305 (56%), Gaps = 21/305 (6%)
Query: 570 ASLFFSTASSS----YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDE 625
A + ST S S +K S+E + ++IDEAAQ E + IPL+ G + +L+GD
Sbjct: 953 AHVLCSTLSGSGHDMFKHLSIEFE---TVIIDEAAQCIELSALIPLKY-GCSKCILVGDP 1008
Query: 626 CQLPAMVESKISDEAGFGRSLFERLTSLNHSK--HLLNIQYRMHPSISLFPNLQFYRNQI 683
QLP V S+ + G+ +SLF R+ NH + HLL+ QYRMHP IS FP+ QFY+ ++
Sbjct: 1009 EQLPPTVLSRSAQSYGYEQSLFVRMQK-NHPQDVHLLDTQYRMHPDISSFPSQQFYKGRL 1067
Query: 684 LDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKA 743
LDG + +K + + T G Y F ++ G + HS N+ E++A +++ Q+L
Sbjct: 1068 LDGDGM-AKLRRQAWHASTILGPYRFFDVEGVQTQGAGHSFINVPELNAAMQLYQRLKTD 1126
Query: 744 WVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTV----KVKSIDGFQGGEEDIII 799
+ IG+++ Y AQ+ A++ + ++N+ G ++ + + D FQG E +III
Sbjct: 1127 YQNIDFTGKIGIITTYKAQLNALKDR----FQNRFGESIFNEIEFNTTDAFQGREREIII 1182
Query: 800 ISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQC 859
S VR + G IGF+S +R+NV LTRA+ LW+LG R+L E W L+ DAK R+
Sbjct: 1183 FSCVRAKSTGGIGFLSDIRRMNVGLTRAKSSLWVLGDSRSLRQGE-FWNKLIEDAKTRKK 1241
Query: 860 FFNAD 864
+ D
Sbjct: 1242 YSGGD 1246
>gi|392566307|gb|EIW59483.1| hypothetical protein TRAVEDRAFT_71533 [Trametes versicolor FP-101664
SS1]
Length = 1937
Score = 177 bits (449), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 158/275 (57%), Gaps = 5/275 (1%)
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT- 651
++IDEAAQ E S IP++ +++GD QLP V+S+ + + G+ +SLF RL
Sbjct: 1528 LVIIDEAAQAIELSSLIPMKYR-CRTCIMVGDPQQLPPTVKSQEACKLGYDQSLFVRLQR 1586
Query: 652 SLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
S + HLL+IQYRMHP IS P+ FY ++LDG ++ K+ ++ + T +FGTY F N
Sbjct: 1587 SQPEAVHLLSIQYRMHPDISQLPSNLFYGGRLLDGPDMAEKT-KRAWQTHPKFGTYRFFN 1645
Query: 712 IIGG-REDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G E HS N E + + +L K + + +GV+S Y Q++ +R+
Sbjct: 1646 VQAGVEESGAGHSLVNRAEAQVAVALYNRLCKEFSSANMDFKVGVISMYRGQILELRRAF 1705
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG-GSIGFISKPQRVNVALTRARH 829
+ + V ++DGFQG E+DIII+S VR G ++GF+ +R+NVALTRA+
Sbjct: 1706 QQRFGEEVLSMVDFNTVDGFQGQEKDIIILSCVRAGPGVQTVGFLRDVRRMNVALTRAKA 1765
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
L++LG+ TL S+ W +V +A++R N D
Sbjct: 1766 SLFVLGNAPTLERSDETWRKIVENARSRSSLVNVD 1800
Score = 43.1 bits (100), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 24/88 (27%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRT------- 309
+NE Q A++ L G LI GPPGTGKT T+ L+ L + +T
Sbjct: 1286 VNEPQANAIIKSL------ATEGFALIQGPPGTGKTSTICGLVQLYLARRPKTSSVIHPG 1339
Query: 310 -----------LACTPTNVAITELASRV 326
L C P+N AI E+A R+
Sbjct: 1340 RPAERELPKKILLCAPSNAAIDEIAFRL 1367
>gi|406861529|gb|EKD14583.1| hypothetical protein MBM_07304 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1997
Score = 177 bits (448), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 158/274 (57%), Gaps = 7/274 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + +L+GD QLP V S+ + G+ +SLF R+
Sbjct: 1551 VIIDEAAQCIELSALIPLKY-GCSKCILVGDPEQLPPTVLSRSAQSFGYEQSLFVRMQK- 1608
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH K HLL+ QYRMHP IS FP+ QFY ++++DG ++ +K ++ + T G Y F +
Sbjct: 1609 NHPKDVHLLDTQYRMHPEISSFPSEQFYNSRLIDGPDM-AKLRQQPWHASTILGPYRFFD 1667
Query: 712 IIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G + ++ HS NI E++A +++ +L + K IG+++ Y AQ+ ++ +
Sbjct: 1668 VAGTQTKQVHGHSFINIPELNAALQLYSRLKTDYTNVDFKGKIGIITTYKAQLNEMKLRF 1727
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
Y + ++ + D FQG E +III S VR G IGF+ +R+NV LTRA+
Sbjct: 1728 AHTYGEEIFQEIEFNTTDAFQGREREIIIFSCVRAKATGGIGFLGDIRRMNVGLTRAKSS 1787
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
LW+LG R+L + W L+ DAK+R + D
Sbjct: 1788 LWVLGDSRSLKQGQ-FWNRLIEDAKSRDRYTTGD 1820
>gi|111219431|ref|XP_646847.2| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
gi|90970906|gb|EAL72919.2| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
Length = 2314
Score = 177 bits (448), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 105/287 (36%), Positives = 166/287 (57%), Gaps = 12/287 (4%)
Query: 566 CFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDE 625
+ A++ FST S+S N +++DE+ Q E S IPL + I +L+GD
Sbjct: 1506 IIRNANIVFSTLSASGSGSVRSNFKANIVLVDESTQSSEPASLIPLCIGNIEKLILVGDP 1565
Query: 626 CQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILD 685
QLP + S S E G SLFERL+ + +LN QYRMHP+IS FP+ QFY++++LD
Sbjct: 1566 LQLPPTIFSSGSAENGLNISLFERLSKV-LPVEMLNTQYRMHPTISRFPSNQFYKDRLLD 1624
Query: 686 GANVKSKSYEKQ-YLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAW 744
G NVKS Y + + + ++G F ++I +E+ S +N +E++ V +++KL + +
Sbjct: 1625 GDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKRSLKNKLEITMVFTLIKKLVQDY 1684
Query: 745 VGSKQKVSIGVVSPYTAQVVAIRKK-IGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTV 803
K K S G+++PY Q I+++ F Y ++ +IDG QG E+DIII+S V
Sbjct: 1685 PECK-KFSFGIITPYKLQKSEIKEQHKQFNY----PLNIETSTIDGVQGSEKDIIILSCV 1739
Query: 804 RCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGAL 850
R IGF+S +R+NVALTRA+ L+++G+ + L+ + WG
Sbjct: 1740 R---SERIGFLSDRRRINVALTRAKFGLFVIGNSK-LLKKDRTWGPF 1782
Score = 57.8 bits (138), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 8/74 (10%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI--KCRTLACTP 314
LN SQ A+ L + G+ LI GPPGTGKT T+ LL LL I K + L C P
Sbjct: 1395 LNASQFNAIETSL------SKKGITLIQGPPGTGKTTTIYYLLSILLAINPKFKILVCGP 1448
Query: 315 TNVAITELASRVLK 328
++ ++ E+A R LK
Sbjct: 1449 SHASVDEVAKRCLK 1462
>gi|345562914|gb|EGX45922.1| hypothetical protein AOL_s00112g111 [Arthrobotrys oligospora ATCC
24927]
Length = 1999
Score = 177 bits (448), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 168/283 (59%), Gaps = 13/283 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IP++ G +++GD QLP V S+ + + + +SLF R+
Sbjct: 1536 VIIDEAAQSIELSALIPMKF-GCKKCIMVGDPKQLPPTVLSREASKFAYEQSLFVRMQK- 1593
Query: 654 NH--SKHLLNIQYRMHPSISLFPNLQFYRNQILDGANV---KSKSYEKQYLTGTEFGTYS 708
NH S HLL+IQYRMHP+IS FP+ FY +Q+ DG ++ +S+ + + FG Y
Sbjct: 1594 NHPESVHLLSIQYRMHPAISSFPSEMFYNSQLEDGPDMTMLRSQPWHQSLF----FGPYR 1649
Query: 709 FINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
F N++G +E HS +NI EV+ + I ++L + + IG+++PY Q+ A+R+
Sbjct: 1650 FFNVVG-QEAMSGHSMKNIHEVNVALMIYKRLVADFPETNFSGKIGIITPYKTQLHALRQ 1708
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
K Y ++ T++ + D FQG E +III S VR + +IGF+S +R+NV LTRAR
Sbjct: 1709 KFVDTYNDQILRTIEFNTTDAFQGREREIIIFSCVRASQKSTIGFLSDIRRMNVGLTRAR 1768
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAK 871
L++LG+ TL +E W +LV +A+ R + + E+ L +
Sbjct: 1769 SSLFVLGNANTLKKNE-FWASLVENAQDRGYYTEGNFEQLLRR 1810
Score = 45.1 bits (105), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 26/97 (26%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLR------------ 304
+N+ Q A++ +R G LI GPPGTGKTKTV ++ LL
Sbjct: 1284 VNKPQARAIIGAVRN------DGFSLIQGPPGTGKTKTVIAVIGALLPDDKGVTISIPGS 1337
Query: 305 -------IKCRTLACTPTNVAITELASRVLK-LVKES 333
+ + L C P+N A+ EL R+ + +VK+S
Sbjct: 1338 KQPSSGVVSKKLLVCAPSNAAVDELVIRLKEGVVKQS 1374
>gi|170089137|ref|XP_001875791.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649051|gb|EDR13293.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1937
Score = 176 bits (447), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 154/274 (56%), Gaps = 4/274 (1%)
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS 652
L+IDEAAQ E S IPL+ VL+GD QLP V S+ + + +SLF RL
Sbjct: 1538 MLIIDEAAQAIELSSLIPLKYNSA-RCVLVGDPQQLPPTVLSQEACRYSYNQSLFVRLQK 1596
Query: 653 -LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
++ HLL+IQYRMHP IS FP+ FY ++I DG + + ++ + T +FGTY F N
Sbjct: 1597 RCPNAVHLLSIQYRMHPDISRFPSRVFYESKIQDGPRMDEVT-KQPWHTHVKFGTYKFFN 1655
Query: 712 IIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
+ G E+ S +N+ E + + +L + + +GVVS Y AQ+V +R+
Sbjct: 1656 VSQGVEEQSGRSIKNLAECQVAVALYNRLCQEYKAFNFDSRVGVVSMYRAQIVELRRHFE 1715
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG-GSIGFISKPQRVNVALTRARHC 830
+ + ++DGFQG E+D+II+S VR G S+GF+S +R+NVALTRA+
Sbjct: 1716 KRFGKDIIGRIDFNTVDGFQGQEKDVIILSCVRSGPGLQSVGFLSDVRRMNVALTRAKSS 1775
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
L+ILG+ TL S W +V DA++R D
Sbjct: 1776 LFILGNAPTLERSNDTWREIVVDARSRLALLQVD 1809
>gi|409042014|gb|EKM51498.1| hypothetical protein PHACADRAFT_199007 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1989
Score = 176 bits (447), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 104/282 (36%), Positives = 159/282 (56%), Gaps = 8/282 (2%)
Query: 588 IKPLNF--LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRS 645
++P F +VIDEAAQ E S IPL+ V++GD QLP V+S+ + + +S
Sbjct: 1545 LEPYEFEMVVIDEAAQAVELSSLIPLKYR-CQRCVMVGDPQQLPPTVQSQQATGFSYNQS 1603
Query: 646 LFERLTSLNHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTE 703
LF RL +H + HLL+IQYRMHP ISL P+ FY ++LDG ++ SK+ ++ + +
Sbjct: 1604 LFVRLQK-HHPEAVHLLSIQYRMHPDISLLPSRLFYNGRLLDGPDMASKT-QRPWHRHPK 1661
Query: 704 FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQV 763
FG Y F N+ G E HS N E + + +L + + IG+V+ Y AQ+
Sbjct: 1662 FGPYRFYNVHRGVETTASHSYLNQAEAEIAVALYNRLRQEFSAHDFDFKIGIVTMYKAQM 1721
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG-GSIGFISKPQRVNV 822
+ +R+ + V ++DGFQG E++II++S VR G +GF+ +R+NV
Sbjct: 1722 LELRRAFERRFGTNIHGLVDFNTVDGFQGQEKEIIVLSCVRAGPGVERVGFLRDVRRMNV 1781
Query: 823 ALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
ALTRA+ ++ILG+ TL S+ W +V DA+ R C + D
Sbjct: 1782 ALTRAKSSIFILGNAATLERSDEDWRTIVKDARERSCLVDVD 1823
Score = 50.1 bits (118), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 36/160 (22%)
Query: 188 KTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDE 247
+T S+ +T++ R ++SL + + +L + + R L V + +
Sbjct: 1247 QTGSSWMISKITSLTTIHREYSSLMALPYYDLCPAILDANLLQSARANLDDVNQTMK--- 1303
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC 307
+ LNE Q A+L+ LR +G LI GPPGTGKT T+ L+ L +
Sbjct: 1304 ------AYNLNEPQANAILSALRT------AGFSLIQGPPGTGKTSTICGLVQAFLAKRG 1351
Query: 308 RT---------------------LACTPTNVAITELASRV 326
RT L C P+N AI E+ R+
Sbjct: 1352 RTATAIHAGRNSGPADKEPKKKILLCAPSNAAIDEITYRL 1391
>gi|66826987|ref|XP_646848.1| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
gi|60474984|gb|EAL72920.1| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
Length = 2523
Score = 176 bits (446), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 169/293 (57%), Gaps = 24/293 (8%)
Query: 566 CFKRASLFFSTASSSYKLHSVEIKPL------NFLVIDEAAQLKESESTIPLQLAGINHA 619
+ A++ F+T S+S KP+ N +++DE+ Q E S IPL + I
Sbjct: 1705 IIRNATIIFATLSASGS------KPIRSNFKANIVLVDESTQSSEPASLIPLCIGNIEKL 1758
Query: 620 VLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFY 679
+L+GD QLP + S S + G SLFERL+ + +LN QYRMHP+IS FP+ QFY
Sbjct: 1759 ILVGDPLQLPPTIFSSESAKNGLNISLFERLSKV-LPVEMLNTQYRMHPTISRFPSNQFY 1817
Query: 680 RNQILDGANVKSKSYEKQ-YLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQ 738
++++LDG NVKS Y + + + ++G F ++I +E+ S +N +E++ V +++
Sbjct: 1818 KDRLLDGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKRSLKNKLEITMVFTLIK 1877
Query: 739 KLYKAWVGSKQKVSIGVVSPYTAQVVAIRKK-IGFEYENKDGFTVKVKSIDGFQGGEEDI 797
KL + + K K S G+++PY Q I+++ F Y ++ +IDG QG E+DI
Sbjct: 1878 KLVQDYPECK-KFSFGIITPYKLQKSEIKEQHKQFNY----PLNIETSTIDGVQGSEKDI 1932
Query: 798 IIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGAL 850
II+S VR IGF+S +R+NVALTRA+ L+++G+ + L+ + WG
Sbjct: 1933 IILSCVR---SERIGFLSDRRRINVALTRAKFGLFVIGNSK-LLKKDRTWGPF 1981
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI--KCRTLACTP 314
LN SQ A+ L G+ LI GPPGTGKT T+ LL LL I K + L C P
Sbjct: 1594 LNTSQFSAVETSLST------KGITLIQGPPGTGKTTTIYYLLSILLAINPKFKILVCGP 1647
Query: 315 TNVAITELASRVLK 328
++ ++ E+A R LK
Sbjct: 1648 SHASVDEVAKRCLK 1661
>gi|414886089|tpg|DAA62103.1| TPA: hypothetical protein ZEAMMB73_701312 [Zea mays]
Length = 688
Score = 176 bits (445), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 157/286 (54%), Gaps = 19/286 (6%)
Query: 591 LNFLVIDEAAQLKESESTIPLQL--AGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
+ ++IDEAAQ E + IPLQ+ + +++GD QLPA V S ++ + + S+FE
Sbjct: 62 FDVVIIDEAAQALEPATLIPLQILKSRGTKCIMVGDPKQLPATVMSGLASKFLYECSMFE 121
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYS 708
RL + +L QYRMHP IS FP+L FY N++LDG V KS + G Y
Sbjct: 122 RLQRAGYPVIMLTKQYRMHPEISRFPSLHFYENKLLDGVEVADKSASFHFHEC--LGPYM 179
Query: 709 FINIIGGRE----DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVV 764
F +I GRE + S N E A ++IL L + IG+++PY +Q+
Sbjct: 180 FFDIADGREHCGRNAATQSLCNDFEADAALEILSFLNNRYPLEFTSRKIGIITPYRSQLS 239
Query: 765 AIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGG----------SIGFI 814
+R K + + +++ ++DGFQG E DI+++STVR + SIGF+
Sbjct: 240 ILRSKFTSSFGPEIVAEMEINTVDGFQGREVDILLLSTVRASNSSDDSHRTGEARSIGFV 299
Query: 815 SKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
+ +R+NVALTRAR LWI+G+ RTL S W +LVCDA+ R F
Sbjct: 300 ADVRRMNVALTRARLSLWIVGNARTL-RINSHWNSLVCDAEERNLF 344
>gi|169609334|ref|XP_001798086.1| hypothetical protein SNOG_07756 [Phaeosphaeria nodorum SN15]
gi|160701819|gb|EAT85222.2| hypothetical protein SNOG_07756 [Phaeosphaeria nodorum SN15]
Length = 1955
Score = 176 bits (445), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 200/395 (50%), Gaps = 36/395 (9%)
Query: 527 LLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLV---LEDFCFKRASLFFSTASSS--- 580
L L QR++ ++ R + NS DE L S L ++ A + +T S S
Sbjct: 1445 LFALRQRKA---ALGRQIDNSKDEERLQSRNSDLSRRRAQEAILNDAHIICATLSGSGHE 1501
Query: 581 -YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDE 639
++ S+E + ++IDEAAQ E + IPL+ G VL+GD QLP V SK++
Sbjct: 1502 MFQGLSIEFE---TVIIDEAAQCVELSALIPLKY-GCAKCVLVGDPKQLPPTVFSKVASR 1557
Query: 640 AGFGRSLFERLTSLNHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSY 694
+ +SLF R+ NH HLL+ QYRMHP ISLFP+ +FY +++DG A ++ + +
Sbjct: 1558 HQYSQSLFARMEK-NHPNDVHLLDTQYRMHPEISLFPSREFYDGKLMDGGDMATIRKQPW 1616
Query: 695 EKQYLTGTEFGTYSFINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSI 753
+ L FG Y F ++ G + HS N E+ +K+ +L + + I
Sbjct: 1617 HQSML----FGPYRFFDVAGQQSAAPKGHSLINRAEIEVAMKLYHRLTSDFPDYNFRGKI 1672
Query: 754 GVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGF 813
G+++PY +Q+ ++ + Y + ++ + D FQG E +III S VR + G +GF
Sbjct: 1673 GIITPYKSQLTELKTRFASVYGAQIIEDIEFNTADAFQGRESEIIIFSCVRASDRGGLGF 1732
Query: 814 ISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFF--NADEERNLAK 871
+ +R+NV LTRA+ +W+LG +L E W LV DA+ R+ F N + N
Sbjct: 1733 LEDIRRMNVGLTRAKSSMWVLGHAPSLSRGE-FWRGLVEDAQERKRFTTGNLTQMLNQHS 1791
Query: 872 ARLEVSKE--------LVEIGAESLTSTSQGGKKE 898
++ KE LVEI +E ++ + G E
Sbjct: 1792 SKFPAPKEGYVQPHRPLVEIKSEPMSRSGSGQSNE 1826
>gi|19112847|ref|NP_596055.1| tRNA-splicing endonuclease positive effector (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74582870|sp|O94387.1|YGSA_SCHPO RecName: Full=Uncharacterized ATP-dependent helicase C29A10.10c
gi|4007798|emb|CAA22438.1| tRNA-splicing endonuclease positive effector (predicted)
[Schizosaccharomyces pombe]
Length = 1944
Score = 176 bits (445), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 169/293 (57%), Gaps = 10/293 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL-TS 652
++IDEAAQ E S IPL+ G V++GD QLP V SK S + G+ +SL+ R+
Sbjct: 1513 VIIDEAAQAVELSSIIPLKY-GCESCVMVGDPNQLPPTVLSKTSAKFGYSQSLYVRMFKQ 1571
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
N S LL+IQYRM+P IS FP+ FY +++LDG N+ S + + + G Y F N+
Sbjct: 1572 HNESACLLSIQYRMNPEISRFPSKFFYNSKLLDGPNM-SAVTSRPWHEDPQLGIYRFFNV 1630
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGF 772
G S N+ E S ++ + ++L + ++ + IGVV+PY +QV +R +
Sbjct: 1631 HGTEAFSNSKSLYNVEEASFILLLYERLIQCYLNIDFEGKIGVVTPYRSQVQQLRSQFQR 1690
Query: 773 EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLW 832
+Y + + + ++DGFQG E+DIII S VR + G IGF+ +R+NVALTRA+ L+
Sbjct: 1691 KYGSIIFKHLDIHTVDGFQGQEKDIIIFSCVRSSMSGGIGFLQDLRRLNVALTRAKSSLY 1750
Query: 833 ILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGA 885
I+G+ + L+ E I+ +L+ DAK R + R+L+ + + SK + +
Sbjct: 1751 IVGNSKPLM-QEDIFYSLIEDAKTRGVW------RDLSANQFKNSKSISNVST 1796
>gi|325095786|gb|EGC49096.1| helicase SEN1 [Ajellomyces capsulatus H88]
Length = 2150
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 174/310 (56%), Gaps = 14/310 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E + IPL+ G + +L+GD QLP V SK++ + +SLF R+ +
Sbjct: 1542 VVIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSKVASRFQYEQSLFVRMQA- 1599
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH K HLL+ QYRMHP IS FP+ FY ++ DG ++ +K + + + G Y F +
Sbjct: 1600 NHPKDVHLLDTQYRMHPEISRFPSTAFYDGRLKDGPDM-AKLRVRPWHSSELLGPYRFFD 1658
Query: 712 IIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G HS N+ E+ +K+ ++L ++ K IG+++PY Q+ ++ +
Sbjct: 1659 VQGLHSSAPKGHSLVNLAELRVAMKLYERLTIDYMTYDFKGKIGIITPYKGQLREMKNQF 1718
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
+Y N TV+ + D FQG E ++II S VR + G IGF++ +R+NV LTRA+
Sbjct: 1719 ANKYGNSIFTTVEFNTTDAFQGRECEVIIFSCVRASNRG-IGFLADIRRMNVGLTRAKSS 1777
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEI------G 884
LW+LG+ ++L+ E W L+ DA++R + D + L + ++ + EL ++
Sbjct: 1778 LWVLGNSQSLVQGE-FWNGLITDAQSRNLYTQGDVLKLLQRPQISLDMELKDVQMIDAPS 1836
Query: 885 AESLTSTSQG 894
A+SL + G
Sbjct: 1837 AKSLPPSRNG 1846
>gi|409079006|gb|EKM79368.1| hypothetical protein AGABI1DRAFT_91927 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1901
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/351 (33%), Positives = 190/351 (54%), Gaps = 25/351 (7%)
Query: 527 LLQLHQRRSECLSVLRNLWN-------SLDELNLPCTTSKLVLEDFCFKRASLFFSTASS 579
+ QL+ RRS + L + +LD L T K++LE A + ST S
Sbjct: 1446 IAQLNARRSSLAGRMDRLKDEQKSASRTLDALRR-STRQKILLE------ADVICSTLSG 1498
Query: 580 SYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKIS 637
+ H + I+ L+F +++DE+AQ E + IPL+ + +L+GD QLP V S+ +
Sbjct: 1499 AG--HEI-IERLDFDMIIVDESAQAIELSTLIPLKYS-CQRCILVGDPQQLPPTVLSQEA 1554
Query: 638 DEAGFGRSLFERLT-SLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK 696
+ + +SLF R+ S + HLL+IQYRMHP IS P+ FY+ ++ DG ++ K+ +
Sbjct: 1555 SKYRYNQSLFVRMQRSQPDAVHLLSIQYRMHPEISQLPSSVFYQGRLNDGPSMAEKTAQP 1614
Query: 697 QYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS--IG 754
+ FG Y F N+ G E+ HS +N+ E + + +L + + + +G
Sbjct: 1615 -WHKNAHFGIYKFFNVSKGLEEMSRHSIKNLAECHVAVALFNRLRREYGQDMSDIDYRVG 1673
Query: 755 VVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG-GSIGF 813
+VS Y AQ+ ++++ + + V ++DGFQG E+DIII+S VR G ++GF
Sbjct: 1674 IVSMYRAQIAELKRQFEQRFGKEILSRVDFNTVDGFQGQEKDIIILSCVRAGPGLQTVGF 1733
Query: 814 ISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
+S +R+NVALTRA+ L+ILG+ TL S+ W +V DA+ R AD
Sbjct: 1734 LSDVRRMNVALTRAKSSLYILGNAATLERSDPNWRKIVGDARGRSRLVEAD 1784
Score = 43.5 bits (101), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 29/98 (29%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCR-------- 308
+NE Q A+L + +G LI GPPGTGKT T+ L+ L + R
Sbjct: 1273 INEPQAIAVLKSM------ATNGFSLIQGPPGTGKTSTICGLVSLALSKRNRPAVPIQIG 1326
Query: 309 -----------TLACTPTNVAITELASRVLKLVKESYK 335
L C P+N AI E+A R +K+ Y+
Sbjct: 1327 KGPTERPPLPKVLLCAPSNAAIDEIARR----IKDGYR 1360
>gi|342873257|gb|EGU75464.1| hypothetical protein FOXB_14012 [Fusarium oxysporum Fo5176]
Length = 2080
Score = 175 bits (443), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 154/277 (55%), Gaps = 13/277 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G +L+GD QLP V S+ + + G+ +SLF R+
Sbjct: 1594 VIIDEAAQCVELSALIPLKY-GCYKCILVGDPKQLPPTVLSQSAAKFGYDQSLFVRMQQ- 1651
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANV---KSKSYEKQYLTGTEFGTYS 708
NH + HLL++QYRMHP ISLFP+ +FY Q+ DG N+ + + + K L G Y
Sbjct: 1652 NHPRSVHLLDMQYRMHPEISLFPSREFYEGQLADGQNMHELRQQPWHKSAL----LGPYR 1707
Query: 709 FINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F ++ G +E S N E+ I++ + + IG+++PY AQ+ +R
Sbjct: 1708 FFDVQGVQERGHKGQSLVNTKELDVAIQMYDRFSNEYRECDLTGKIGIITPYKAQLYELR 1767
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ Y ++ + D FQG E +III S VR ++ G IGF++ +R+NV LTRA
Sbjct: 1768 NRFRSRYGENITSIIEFNTTDAFQGRECEIIIFSCVRASSTGGIGFMTDIRRMNVGLTRA 1827
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
+ LWILG R L+ E W L+ DA+AR + N D
Sbjct: 1828 KSSLWILGDSRALVQGE-FWRKLIEDAQARDRYTNGD 1863
Score = 47.8 bits (112), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 75/188 (39%), Gaps = 47/188 (25%)
Query: 175 YKVKARNNMQVHDKTKK-SFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSVVDER 233
Y+V +RNN T S F + +TN+ +R + +L + ++ ++L
Sbjct: 1264 YRVASRNNPMTQVLTPNVSVFGVKITNMTTIEREFAALESLPYYDLMDEILN-------- 1315
Query: 234 CELCSVQRKGQWDEKFGPSFSS-TLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKT 292
E + + G DEK ++ LN Q A+L G LI GPPGTGKT
Sbjct: 1316 AEPSPILQYG--DEKINNCMNNYALNRGQATAVLGA------HDNDGFTLIQGPPGTGKT 1367
Query: 293 KTVSMLLLTLLRIKC-----------------------------RTLACTPTNVAITELA 323
KT+ ++ TLL + + L C P+N A+ EL
Sbjct: 1368 KTIVAMVGTLLSEQLSQSGNQGIPVGVPLRPNGAPGAPKQNRSKKLLVCAPSNAAVDELV 1427
Query: 324 SRVLKLVK 331
R+ VK
Sbjct: 1428 LRLKAGVK 1435
>gi|346325571|gb|EGX95168.1| tRNA-splicing endonuclease, putative [Cordyceps militaris CM01]
Length = 2040
Score = 175 bits (443), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/277 (37%), Positives = 153/277 (55%), Gaps = 13/277 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G +L+GD QLP V S+ + G+ +SLF R+
Sbjct: 1558 VIIDEAAQCVELSALIPLKY-GCCKCILVGDPKQLPPTVLSQSAARFGYDQSLFVRMQQ- 1615
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYS 708
NH K HLL++QYRMHP ISLFP+ +FY Q+ DG A ++ + + K L G Y
Sbjct: 1616 NHPKSVHLLDMQYRMHPEISLFPSKEFYEGQLRDGQDMAGLRQQPWHKSAL----LGPYR 1671
Query: 709 FINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F ++ G +E S N E+ +++ + K + IG+++PY AQ+ +R
Sbjct: 1672 FFDVQGVQERGHRGQSLVNTRELEVALQMYDRFRKEYSECNLVGKIGIITPYKAQLFELR 1731
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
K+ Y ++ + D FQG E +III S VR + G IGF++ +R+NV LTRA
Sbjct: 1732 KRFRARYGEDICDIIEFNTTDAFQGRECEIIIFSCVRASATGGIGFMTDIRRMNVGLTRA 1791
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
+ LWILG R L+ E W L+ DAK+R F D
Sbjct: 1792 KSSLWILGDSRALVQGE-FWKKLIEDAKSRDRFTQGD 1827
>gi|225558060|gb|EEH06345.1| DEAD-box type RNA helicase [Ajellomyces capsulatus G186AR]
Length = 2150
Score = 174 bits (442), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 168/293 (57%), Gaps = 8/293 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E + IPL+ G + +L+GD QLP V SK++ + +SLF R+ +
Sbjct: 1542 VVIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSKVASRFQYEQSLFVRMQA- 1599
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH K HLL+ QYRMHP IS FP+ FY ++ DG ++ +K + + + G Y F +
Sbjct: 1600 NHPKDVHLLDTQYRMHPEISRFPSAAFYDGRLKDGPDM-AKLRVRPWHSSELLGPYRFFD 1658
Query: 712 IIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G HS N+ E+ +K+ ++L ++ K IG+++PY Q+ ++ +
Sbjct: 1659 VQGLHSSAPKGHSLVNLAELRVAMKLYERLTIDYMTYDFKGKIGIITPYKGQLREMKNQF 1718
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
+Y N TV+ + D FQG E ++II S VR + G IGF++ +R+NV LTRA+
Sbjct: 1719 ANKYGNSIFTTVEFNTTDAFQGRECEVIIFSCVRASNRG-IGFLADIRRMNVGLTRAKSS 1777
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEI 883
LW+LG+ ++L+ E W L+ DA++R + D + L + ++ + EL ++
Sbjct: 1778 LWVLGNSQSLVQGE-FWNGLITDAQSRNLYTQGDILKLLQRPQISLDMELKDV 1829
>gi|308198102|ref|XP_001386840.2| DEAD-box type RNA helicase [Scheffersomyces stipitis CBS 6054]
gi|149388861|gb|EAZ62817.2| DEAD-box type RNA helicase [Scheffersomyces stipitis CBS 6054]
Length = 1999
Score = 174 bits (441), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 162/276 (58%), Gaps = 13/276 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEA Q E S IPL+ G +++GD QLP V S+ + + +SLF R+
Sbjct: 1528 VVIDEACQCVELSSIIPLRY-GCKKCIMVGDPNQLPPTVLSQAAASFNYEQSLFVRMQQN 1586
Query: 654 N-HSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
N +S +LL++QYRMHP IS FP+ QFY++++ DG + +K+ E+ + + Y F +I
Sbjct: 1587 NPNSVYLLDVQYRMHPQISAFPSAQFYQSRLKDGEGMAAKN-ERPWHSQYPLSPYRFFDI 1645
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR---- 767
+ + + + S N E +++++KL + IG++SPY Q+ +R
Sbjct: 1646 VSRHQRNELSRSLFNTGEARVALELVEKLMTLLPEDQFSGRIGIISPYKEQIKTLRDVFI 1705
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
KK G+ + F ++DGFQG E++III+S VR + G++GF+S +R+NVALTRA
Sbjct: 1706 KKYGYSITTQIDFN----TVDGFQGQEKEIIIMSCVRASDNGNVGFLSDVRRMNVALTRA 1761
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
R LWILG++ +L+ ++ IW L+ DA R C A
Sbjct: 1762 RTTLWILGNKESLMRNK-IWNKLLTDATDRNCVSQA 1796
>gi|240273304|gb|EER36825.1| helicase SEN1 [Ajellomyces capsulatus H143]
Length = 2150
Score = 174 bits (440), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 173/310 (55%), Gaps = 14/310 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E + IPL+ G + +L+GD QLP V SK++ + +SLF R+ +
Sbjct: 1542 VVIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSKVASRFQYEQSLFVRMQA- 1599
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH K HLL+ QYRMHP IS FP+ FY ++ DG ++ K + + + G Y F +
Sbjct: 1600 NHPKDVHLLDTQYRMHPEISRFPSAAFYDGRLKDGPDM-DKLRVRPWHSSELLGPYRFFD 1658
Query: 712 IIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G HS N+ E+ +K+ ++L ++ K IG+++PY Q+ ++ +
Sbjct: 1659 VQGLHSSAPKGHSLVNLAELRVAMKLYERLTIDYMTYDFKGKIGIITPYKGQLREMKNQF 1718
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
+Y N TV+ + D FQG E ++II S VR + G IGF++ +R+NV LTRA+
Sbjct: 1719 ANKYGNSIFTTVEFNTTDAFQGRECEVIIFSCVRASNRG-IGFLADIRRMNVGLTRAKSS 1777
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEI------G 884
LW+LG+ ++L+ E W L+ DA++R + D + L + ++ + EL ++
Sbjct: 1778 LWVLGNSQSLVQGE-FWNGLIIDAQSRNLYTQGDILKLLQRPQISLDMELKDVQMIDAPS 1836
Query: 885 AESLTSTSQG 894
A+SL + G
Sbjct: 1837 AKSLPPSRNG 1846
>gi|428178714|gb|EKX47588.1| hypothetical protein GUITHDRAFT_137364 [Guillardia theta CCMP2712]
Length = 1135
Score = 174 bits (440), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 163/288 (56%), Gaps = 23/288 (7%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
++ ++IDEA Q E+ + IPL L G +L+GD QLPA V S+ S A + RSLFERL
Sbjct: 586 IDTVIIDEACQSVEAGTLIPL-LLGARRCILVGDPRQLPATVISQSSSAAIYQRSLFERL 644
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFI 710
S NH LLN+QYRMHP I+ FP+ FY +++D N+ + ++Y FG + F
Sbjct: 645 MSCNHPVALLNVQYRMHPEITRFPSEYFYEGRLVDAENLGRRKEGERYQADPWFGPFHFF 704
Query: 711 NIIGGREDFI-YHSCRNIVEVSAVIKILQKLYKAWVGSKQ-KVSIGVVSPYTAQ----VV 764
++I +E S RN+ E V ++++L + + K I +++PY Q
Sbjct: 705 DLIDSKEQRSDGSSLRNVAEAKFVALLVKELISRYSQRGELKGKIAILTPYRQQRNEITS 764
Query: 765 AIRKKIGFE-----YENKD---------GFTVKVKSIDGFQGGEEDIIIISTVRCNTGGS 810
++++ +G EN+ G+++ V ++D QG E DI+I S VR NT G
Sbjct: 765 SLKRLVGPHAVSESVENRSPEVVTELARGYSIDVMTVDSCQGQERDIVIFSCVRANTRG- 823
Query: 811 IGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQ 858
+GF+ +R+NVALTRARH L ++G+ +L +SE W A + +AK R+
Sbjct: 824 VGFLEDVRRMNVALTRARHSLLVIGNSNSLKASEP-WKAFLANAKKRE 870
Score = 47.8 bits (112), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 198 LTNILPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTL 257
L N+ + R W ++H N ++ ++L + + + G + +S
Sbjct: 252 LRNMGASIREWRAVHEIKNSPLLHEILNPNKFTSLPNDDEVAKIMGHLNPVVQTHIASRS 311
Query: 258 NESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI 305
N+SQ+ A+ A D HR+GV L+ GPPGTGKT TV + +L L +
Sbjct: 312 NKSQLVAIAAAC---DPAHRTGVTLLQGPPGTGKT-TVILSILNFLHL 355
>gi|118349864|ref|XP_001008213.1| conserved hypothetical protein [Tetrahymena thermophila]
gi|89289980|gb|EAR87968.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
Length = 1866
Score = 174 bits (440), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 151/274 (55%), Gaps = 23/274 (8%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
L++DEAAQ E + IPL N +LIGD QLPA S+ + RSLFER+
Sbjct: 1087 LIVDEAAQCTEPNNIIPLYYQP-NKMILIGDPKQLPATTFQPESNITKYNRSLFERIIDN 1145
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
+ L+ QYRMHP+I FP++QFY N++ DG +V ++ + YL E FI+I+
Sbjct: 1146 KIKPYFLDQQYRMHPNIREFPSIQFYDNKLKDGPSVANRPFPN-YLQRLERFNTQFIDIV 1204
Query: 714 GGREDFIYHSCRNIVEVSAVIKI-------LQKLYKAWVGSKQKVSIGVVSPYTAQV--- 763
RE S N E A I I +++ K SK+ +SIG+++PY Q
Sbjct: 1205 FSREKMNQKSYENEAEGLASISICNQIIDEIERQQKVQPESKETLSIGIITPYKQQTRLI 1264
Query: 764 -VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGS-----IGFISKP 817
IRK+I Y ++V ++D FQG E+DIII +TVR N+ IGF+
Sbjct: 1265 NELIRKQIPKSYHK----FIQVNTVDSFQGQEKDIIIFTTVRVNSKQEWRENMIGFLQDE 1320
Query: 818 QRVNVALTRARHCLWILGSERTLISSESIWGALV 851
+R+NVALTRA++CL +LG TL +S +WGA V
Sbjct: 1321 RRMNVALTRAKYCLIVLGHADTL-NSNPVWGAFV 1353
>gi|389744605|gb|EIM85787.1| hypothetical protein STEHIDRAFT_58796 [Stereum hirsutum FP-91666 SS1]
Length = 2031
Score = 174 bits (440), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 156/279 (55%), Gaps = 5/279 (1%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
+ ++IDEAAQ E S IPL+ + + D QLP V S + + + +SLF RL
Sbjct: 1545 FDMIIIDEAAQAIELSSLIPLKYRS-SRIFMCTDPQQLPPTVISMEASKYMYNQSLFVRL 1603
Query: 651 TSLN-HSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSF 709
+ HLL+IQYRMHP IS P+ FY ++ DG + K+ ++ + T +FGTY F
Sbjct: 1604 QKHRPDAVHLLSIQYRMHPDISQLPSALFYNGRLQDGPGMVEKT-KRPWHTSPKFGTYRF 1662
Query: 710 INIIGGRED-FIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
N+ G+E HS N EV + + +L + + +GVVS Y Q+ ++R+
Sbjct: 1663 FNVTNGQESQGSSHSYMNTAEVRIAVSLFHRLRQEFSSVDFDFRVGVVSMYREQIFSLRR 1722
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG-GSIGFISKPQRVNVALTRA 827
+ + V ++DGFQG E+DIII+S VR G ++GF++ +R+NVALTR+
Sbjct: 1723 AFEQRFGREIIGKVDFNTVDGFQGQEKDIIILSCVRAGPGVQTVGFLADVRRMNVALTRS 1782
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEE 866
R L+ILG TL S+ W A+V DA++R F+ DE+
Sbjct: 1783 RASLFILGHAPTLERSDQNWKAIVTDARSRSRLFDVDEQ 1821
>gi|125564230|gb|EAZ09610.1| hypothetical protein OsI_31894 [Oryza sativa Indica Group]
Length = 2181
Score = 174 bits (440), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 111/306 (36%), Positives = 170/306 (55%), Gaps = 21/306 (6%)
Query: 576 TASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQL--AGINHAVLIGDECQLPAMVE 633
TAS+S + E + +VIDEAAQ E + IPLQL + +++GD QLPA V
Sbjct: 1535 TASASKFANFSEHALFDVVVIDEAAQALEPATLIPLQLLKSKGTKCIMVGDPKQLPATVM 1594
Query: 634 SKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKS 693
S ++ + + S+FERL + +L QYRMHP IS FP+L FY N++LDGA KS
Sbjct: 1595 SGLASKFLYECSMFERLQRAGYPVIMLTKQYRMHPEISRFPSLHFYENKLLDGAQAADKS 1654
Query: 694 YEKQYLTGTE-FGTYSFINIIGGRE----DFIYHSCRNIVEVSAVIKILQKLYKAWVGSK 748
G + G Y F ++ GRE + S N E A ++IL L +
Sbjct: 1655 AP---FHGHDCLGPYMFFDVADGREQCGKNAATQSLCNQFEAEAALEILGFLKNRYPSEF 1711
Query: 749 QKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC--- 805
+ IG+++PY +Q+ +R + + + +++ ++DGFQG E DI+++STVR
Sbjct: 1712 SCMKIGIITPYRSQLSLLRSRFNSFFGPEIVAEMEINTVDGFQGREVDILVLSTVRASNS 1771
Query: 806 -----NTGGS--IGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQ 858
+TG + IGF++ +R+NVALTRAR LWI+G+ +TL + S W +L+ +AK R
Sbjct: 1772 SDSRHHTGEARGIGFVADVRRMNVALTRARFSLWIVGNAKTL-QTNSHWASLLQNAKERN 1830
Query: 859 CFFNAD 864
F + +
Sbjct: 1831 LFISVN 1836
>gi|255083106|ref|XP_002504539.1| superfamily I helicase [Micromonas sp. RCC299]
gi|226519807|gb|ACO65797.1| superfamily I helicase [Micromonas sp. RCC299]
Length = 1155
Score = 173 bits (439), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 115/322 (35%), Positives = 166/322 (51%), Gaps = 15/322 (4%)
Query: 559 KLVLEDFCFKRASLFFST-ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGIN 617
+ LE A + F+T SSS K+ + ++IDEAAQ E + IP L G
Sbjct: 698 RAALEASFVDDAEIVFTTLTSSSRKVFRQLTHGFDTVLIDEAAQANEMATLIPF-LHGAR 756
Query: 618 HAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQ 677
VL+GD QLP+ V SK + + F RSLFER L LL++QYRMHP I FP+ +
Sbjct: 757 RCVLVGDPQQLPSTVISKHAQQVSFQRSLFERFNELGAEALLLSVQYRMHPEIREFPSEE 816
Query: 678 FYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVI--- 734
FY +++D A V + E + GTY + G E +S N E V+
Sbjct: 817 FYEGRLMDSACVIKRRPEPYQQKESGLGTYRIFDAHGLEERTTSNSVINHFEAILVVCLY 876
Query: 735 KILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI----GFEYENKDGFTVKVKSIDGF 790
K + K+ + G + + VV+PY QV IRK G E V++ +IDG+
Sbjct: 877 KKIDKVLRDGTGESAEGKVSVVTPYKEQVTVIRKAFEQLCGGEGAASR-LRVQINTIDGY 935
Query: 791 QGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSE-----S 845
QG E D+II STVR + G IGF+S +R+NVA+TRA+ L+I+G L +++ +
Sbjct: 936 QGQESDVIIFSTVRGSGDGGIGFLSDIRRLNVAITRAKKALYIVGRVGKLRAAQAGGEFT 995
Query: 846 IWGALVCDAKARQCFFNADEER 867
+W LV +A R C + + R
Sbjct: 996 VWRDLVQNAMDRGCIVDDADPR 1017
>gi|302921016|ref|XP_003053198.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734138|gb|EEU47485.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 2035
Score = 173 bits (439), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 102/277 (36%), Positives = 154/277 (55%), Gaps = 13/277 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G +L+GD QLP V S+ + + G+ +SLF R+
Sbjct: 1569 VIIDEAAQCVELSALIPLKY-GCCKCILVGDPKQLPPTVLSQSAAKFGYDQSLFVRMQQ- 1626
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANV---KSKSYEKQYLTGTEFGTYS 708
NH K HLL++QYRMHP IS+FP+ +FY Q+ DG N+ + + + K L G Y
Sbjct: 1627 NHPKSVHLLDMQYRMHPEISMFPSREFYEGQLADGQNMHELRQQPWHKSAL----LGPYR 1682
Query: 709 FINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F ++ G +E S N E+ +++ + K + IG+++PY AQ+ +R
Sbjct: 1683 FFDVQGVQERGHRGQSLVNTKELDVAMQLYDRFSKEYQQCDLTGKIGIITPYKAQLYELR 1742
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ Y ++ + D FQG E +III S VR ++ G IGF++ +R+NV LTRA
Sbjct: 1743 NRFRSRYGEAITNIIEFNTTDAFQGRECEIIIFSCVRASSTGGIGFMTDIRRMNVGLTRA 1802
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
+ LWILG R L+ E W L+ DA+AR + D
Sbjct: 1803 KSSLWILGDSRALVQGE-FWRKLIEDAQARDRYTKGD 1838
Score = 47.4 bits (111), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 92/235 (39%), Gaps = 57/235 (24%)
Query: 172 ENRYKVKARNNMQVHDKTKK-SFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSVV 230
E Y+V +RNN T S + + +TN+ +R + +L + ++ ++L
Sbjct: 1237 EVTYRVASRNNPMTQVLTPNVSVYGVKITNMTTIEREYAALESLQYYDLMDEILN----- 1291
Query: 231 DERCELCSVQRKGQWDEKFGPSFSS-TLNESQVGAMLACLRRLDCGHRSGVELIWGPPGT 289
E + R G+ EK + +LN Q A+L G LI GPPGT
Sbjct: 1292 ---AEPSPILRYGE--EKVSSCMDNFSLNRGQAMAVLGA------HDNDGFTLIQGPPGT 1340
Query: 290 GKTKTVSMLLLTLLRIKC-----------------------------RTLACTPTNVAIT 320
GKTKT+ ++ TLL + + L C P+N A+
Sbjct: 1341 GKTKTIVAMVGTLLSEQLSQMNNTGVPVGVPLRPNGAPAANNQARSKKLLVCAPSNAAVD 1400
Query: 321 ELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIK 375
EL R+ +K + + N ++ G D +N +++ L+ +K
Sbjct: 1401 ELVLRLKSGIKTTSGKTRNIN--------VIRLGRSD--AINAAVKDVTLDELVK 1445
>gi|357488337|ref|XP_003614456.1| Helicase sen1 [Medicago truncatula]
gi|355515791|gb|AES97414.1| Helicase sen1 [Medicago truncatula]
Length = 853
Score = 173 bits (439), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 160/297 (53%), Gaps = 6/297 (2%)
Query: 570 ASLFFSTAS-SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 628
A++ FST S S + S + + ++IDEAAQ E + +PL L+GD QL
Sbjct: 458 ATIVFSTLSFSGSHVFSKLSRNFDVVIIDEAAQAVEPATLVPLA-NKCKKVFLVGDPAQL 516
Query: 629 PAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
PA V S I+ G+G SLFERL + +L QYRMHP I FP+++FY N + DG
Sbjct: 517 PATVISDIATNHGYGTSLFERLMQAGYPIKMLKTQYRMHPEIRSFPSMEFYNNSLEDGEG 576
Query: 689 VKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVG 746
VK ++ E+ + FG +SF +I G+E S N+ EV V+ + QKL +
Sbjct: 577 VKIQT-ERDWHRYRCFGPFSFFDIHEGKEARPSGSGSWVNVEEVDFVLLLYQKLVSLYPT 635
Query: 747 SKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCN 806
K + ++SPY AQV +++ + V + ++DG QG E+D+ I S VR +
Sbjct: 636 LKSGNQVAIISPYKAQVNLFQQRFEETFGVSAEKLVDICTVDGCQGREKDVAIFSCVRAS 695
Query: 807 TGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
G IGF+ +R+NV +TRA+ + ++GS TL S W LV A+ R CFF A
Sbjct: 696 KEGGIGFLDDIRRMNVGITRAKSAVLVVGSASTLRRSVQ-WNKLVESAEKRDCFFKA 751
>gi|344301279|gb|EGW31591.1| hypothetical protein SPAPADRAFT_51586 [Spathaspora passalidarum NRRL
Y-27907]
Length = 1937
Score = 173 bits (439), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 170/302 (56%), Gaps = 10/302 (3%)
Query: 567 FKRASLFFSTASSSYK--LHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGD 624
+A + ST S S L S+ +K + +++DEA Q E + IPL+ G +++GD
Sbjct: 1474 LSQAQVICSTLSGSAHDFLASLSLK-FDKVIVDEACQCVELSAIIPLRY-GCRTCIMVGD 1531
Query: 625 ECQLPAMVESKISDEAGFGRSLFERLTSLNH--SKHLLNIQYRMHPSISLFPNLQFYRNQ 682
QLP V S+ + + +SLF R+ NH S +LL++QYRMHP IS FP+ +FY ++
Sbjct: 1532 PNQLPPTVLSQAAASYNYEQSLFVRMQK-NHPDSVYLLDVQYRMHPQISQFPSAEFYNSK 1590
Query: 683 ILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLY 741
+ DG + K+ ++ + Y F +I+ E D S N+ E ++++QKL
Sbjct: 1591 LKDGEGMLEKN-DRPWHKDPPLTPYRFFDIVSKHERDDQSRSLFNVEEARVALELVQKLM 1649
Query: 742 KAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIIS 801
K + IG++SPY Q+ +I+ + Y + ++DGFQG E++III+S
Sbjct: 1650 TILPQDKFRGRIGIISPYKEQIRSIKNEFIRRYGRAIQDDIDFNTVDGFQGQEKEIIIMS 1709
Query: 802 TVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFF 861
VR + G++GF+S +R+NVALTRAR LWILG++ +L S ++W L+ DA R C
Sbjct: 1710 CVRASPSGNVGFLSDVRRMNVALTRARTTLWILGNKDSL-SRNNVWRRLLEDASNRDCIS 1768
Query: 862 NA 863
A
Sbjct: 1769 KA 1770
Score = 44.7 bits (104), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 43/94 (45%), Gaps = 24/94 (25%)
Query: 257 LNESQVGAMLACLRRLDCGHRS-GVELIWGPPGTGKTKTVSMLLLTLLRIK--------- 306
LN SQ A+L H+S G LI GPPGTGKTKT+ ++ L K
Sbjct: 1265 LNVSQAKAILGT-------HQSEGFSLIQGPPGTGKTKTILGIVGYSLSQKDEKILDIPG 1317
Query: 307 -------CRTLACTPTNVAITELASRVLKLVKES 333
+ L C P+N A+ EL R+ VK S
Sbjct: 1318 HTPTTDPAKILICAPSNAAVDELVLRLRDGVKNS 1351
>gi|145509537|ref|XP_001440707.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407935|emb|CAK73310.1| unnamed protein product [Paramecium tetraurelia]
Length = 1517
Score = 173 bits (439), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 178/304 (58%), Gaps = 19/304 (6%)
Query: 565 FCFK---RASLFFSTASSS--YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHA 619
FC K A + FST SSS KL S + + L++DEAAQ E + IPL+L GI
Sbjct: 1051 FCEKLLNDAEIIFSTLSSSGSDKL-SKYLDQIELLIVDEAAQCTEPSNIIPLRL-GIKKM 1108
Query: 620 VLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFY 679
+LIGD QLPA S +S + + RSLFER+ N + L+IQYRMH I +FP+ FY
Sbjct: 1109 ILIGDPKQLPATTFSPVSHQTLYNRSLFERILDNNVKPYFLDIQYRMHSEIRMFPSEYFY 1168
Query: 680 RNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQK 739
+N++ D + +++ ++ F++I+ G+E S N E ++++++
Sbjct: 1169 QNKLKDHESTNTRNLPSKFFKNRVL----FLDILDGQEQKDGTSNINEQEAIVIVQLIKS 1224
Query: 740 LYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGF---TVKVKSIDGFQGGEED 796
+ + + +IGV+ Y +QV I+ + ++++++ F T+ + ++D FQG EED
Sbjct: 1225 IKEEFPTQ----TIGVICAYKSQVRYIKTLLKQKFQDENIFDENTISINTVDSFQGQEED 1280
Query: 797 IIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKA 856
II+ S VR + G IGF++ +R+NVALTRA++ L+ILG+ TL S ++W +++ + +
Sbjct: 1281 IILFSCVRSSQTGGIGFLNDGRRMNVALTRAKNALFILGNAITL-SKSNLWRSMLKNIQQ 1339
Query: 857 RQCF 860
R+ +
Sbjct: 1340 RKLY 1343
Score = 46.2 bits (108), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 16/93 (17%)
Query: 258 NESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLL--------LTLLRIKCRT 309
N+SQ ++ + + G+ L+ GPPGTGKT + LL LT K +
Sbjct: 849 NKSQANSIREIILK-----EKGICLVQGPPGTGKTHLLLGLLSGAYEYMKLTNKFPKKKI 903
Query: 310 LACTPTNVAITELASRVLKLVKESYKRDSRSNT 342
L CTP+N AI E+ +L++V++ DS+ N+
Sbjct: 904 LICTPSNAAIDEI---ILRIVQKGGLFDSKGNS 933
>gi|261192749|ref|XP_002622781.1| tRNA-splicing endonuclease [Ajellomyces dermatitidis SLH14081]
gi|239589263|gb|EEQ71906.1| tRNA-splicing endonuclease [Ajellomyces dermatitidis SLH14081]
Length = 2114
Score = 173 bits (438), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 165/296 (55%), Gaps = 14/296 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E + IPL+ G + VL+GD QLP V SK++ + +SLF R+ +
Sbjct: 1541 VVIDEAAQSIELSALIPLKY-GCSKCVLVGDPKQLPPTVLSKVASRFQYEQSLFVRMQA- 1598
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYS 708
NH K HLL+ QYRMHP IS FP+ FY ++ DG A ++ + + K L G Y
Sbjct: 1599 NHPKDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPGMAKLRVRPWHKSEL----LGPYR 1654
Query: 709 FINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F ++ G HS N+ E+ +K+ ++L + IG+++PY Q+ ++
Sbjct: 1655 FFDVQGLHSSAPKGHSLVNVAELRVAMKLYERLITDYRTYDFTGRIGIITPYKGQLREMK 1714
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ +Y N V+ + D FQG E ++II S VR + G IGF++ +R+NV LTRA
Sbjct: 1715 NQFANKYGNSIFTKVEFNTTDAFQGRECEVIIFSCVRASNRG-IGFLADIRRMNVGLTRA 1773
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEI 883
+ LW+LG+ ++L+ E W L+ DA++R + D L K ++ + KEL ++
Sbjct: 1774 KSSLWVLGNSQSLVQGE-FWNGLITDAQSRNLYTQGDVLHLLQKPQISLDKELGDV 1828
>gi|239610200|gb|EEQ87187.1| tRNA-splicing endonuclease [Ajellomyces dermatitidis ER-3]
Length = 2114
Score = 173 bits (438), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 165/296 (55%), Gaps = 14/296 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E + IPL+ G + VL+GD QLP V SK++ + +SLF R+ +
Sbjct: 1541 VVIDEAAQSIELSALIPLKY-GCSKCVLVGDPKQLPPTVLSKVASRFQYEQSLFVRMQA- 1598
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYS 708
NH K HLL+ QYRMHP IS FP+ FY ++ DG A ++ + + K L G Y
Sbjct: 1599 NHPKDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPGMAKLRVRPWHKSEL----LGPYR 1654
Query: 709 FINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F ++ G HS N+ E+ +K+ ++L + IG+++PY Q+ ++
Sbjct: 1655 FFDVQGLHSSAPKGHSLVNVAELRVAMKLYERLITDYRTYDFTGRIGIITPYKGQLREMK 1714
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ +Y N V+ + D FQG E ++II S VR + G IGF++ +R+NV LTRA
Sbjct: 1715 NQFANKYGNSIFTKVEFNTTDAFQGRECEVIIFSCVRASNRG-IGFLADIRRMNVGLTRA 1773
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEI 883
+ LW+LG+ ++L+ E W L+ DA++R + D L K ++ + KEL ++
Sbjct: 1774 KSSLWVLGNSQSLVQGE-FWNGLITDAQSRNLYTQGDVLHLLQKPQISLDKELGDV 1828
>gi|327355296|gb|EGE84153.1| tRNA-splicing endonuclease [Ajellomyces dermatitidis ATCC 18188]
Length = 2179
Score = 173 bits (438), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 165/296 (55%), Gaps = 14/296 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E + IPL+ G + VL+GD QLP V SK++ + +SLF R+ +
Sbjct: 1541 VVIDEAAQSIELSALIPLKY-GCSKCVLVGDPKQLPPTVLSKVASRFQYEQSLFVRMQA- 1598
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYS 708
NH K HLL+ QYRMHP IS FP+ FY ++ DG A ++ + + K L G Y
Sbjct: 1599 NHPKDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPGMAKLRVRPWHKSEL----LGPYR 1654
Query: 709 FINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F ++ G HS N+ E+ +K+ ++L + IG+++PY Q+ ++
Sbjct: 1655 FFDVQGLHSSAPKGHSLVNVAELRVAMKLYERLITDYRTYDFTGRIGIITPYKGQLREMK 1714
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ +Y N V+ + D FQG E ++II S VR + G IGF++ +R+NV LTRA
Sbjct: 1715 NQFANKYGNSIFTKVEFNTTDAFQGRECEVIIFSCVRASNRG-IGFLADIRRMNVGLTRA 1773
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEI 883
+ LW+LG+ ++L+ E W L+ DA++R + D L K ++ + KEL ++
Sbjct: 1774 KSSLWVLGNSQSLVQGE-FWNGLITDAQSRNLYTQGDVLHLLQKPQISLDKELGDV 1828
>gi|9954728|gb|AAG09081.1|AC026237_2 Similar to tRNA-splicing endonuclease positive effector SEN1
[Arabidopsis thaliana]
Length = 2142
Score = 173 bits (438), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/285 (36%), Positives = 159/285 (55%), Gaps = 20/285 (7%)
Query: 591 LNFLVIDEAAQLKESESTIPLQL--AGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
+ +VIDEAAQ E + IPLQL + +++GD QLPA V S ++ + + S+FE
Sbjct: 1523 FDAVVIDEAAQALEPATLIPLQLLKSRGTKCIMVGDPKQLPATVLSNVASKFLYECSMFE 1582
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKS---YEKQYLTGTEFG 705
RL + +L QYRMHP I FP++ FY N++L+G ++ SKS +E +L G
Sbjct: 1583 RLQRAGYPILMLTQQYRMHPEICRFPSMHFYDNKLLNGVDMSSKSAPFHENHHL-----G 1637
Query: 706 TYSFINIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQV 763
Y F +I+ G+E S N E A +++L+ K + IG+++PY Q+
Sbjct: 1638 PYVFYDIVDGQEHRSGDSSSVCNEQEAEAAVQLLRFFKKRYPSEFVAGRIGIITPYKRQL 1697
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGS-------IGFISK 816
+R + + + +++ ++DGFQG E DI+++STVR IGF++
Sbjct: 1698 AVLRSRFTGAFGAQVTADMEMNTVDGFQGKEVDILVLSTVRATHSAPDGVNQSRIGFVAD 1757
Query: 817 PQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFF 861
+R+NVALTRA+ LW+LG+ RTL + WGALV DAK R+
Sbjct: 1758 VRRMNVALTRAKLSLWVLGNTRTLQRDHN-WGALVKDAKEREVII 1801
>gi|299743534|ref|XP_001835836.2| helicase sen1 [Coprinopsis cinerea okayama7#130]
gi|298405699|gb|EAU85901.2| helicase sen1 [Coprinopsis cinerea okayama7#130]
Length = 1960
Score = 173 bits (438), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 152/276 (55%), Gaps = 4/276 (1%)
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL-T 651
++IDEAAQ E S IPL+ +++GD QLP V S+ + + +SLF+R
Sbjct: 1529 MVIIDEAAQAVELSSLIPLKYES-KRCIMVGDPQQLPPTVISQQAASKKYDQSLFQRFFK 1587
Query: 652 SLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
+ HLL+IQYRMHP IS FP+ FY ++I DG N+K + + + G Y N
Sbjct: 1588 KSPKAVHLLSIQYRMHPEISRFPSKAFYNDRIQDGPNMKELT-ARPWHAEPLLGIYKIFN 1646
Query: 712 IIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
+ G E+ +S +N EV + ++L + + IG+VSPY AQ+ + +
Sbjct: 1647 VNGNAEEGPQNSLKNRAEVEVATALYRRLSTQFREFGLERKIGIVSPYRAQIKELERSFF 1706
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG-GSIGFISKPQRVNVALTRARHC 830
+ + ++DGFQG E+DIII+S VR G SIGF++ +R+NVA+TRA+
Sbjct: 1707 QAFGQSVLDEIDFNTVDGFQGQEKDIIILSCVRGGPGVKSIGFMADVRRLNVAITRAKSA 1766
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNADEE 866
L+ILG+ TL SESIW + DA+ R N D +
Sbjct: 1767 LFILGNVPTLERSESIWKQAIADARERNLIVNVDSK 1802
Score = 46.2 bits (108), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 21/85 (24%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLR------------ 304
+NE Q A++ + +G LI GPPGTGKT T+ L+ +
Sbjct: 1289 INEPQATAIIGAM------ASTGFVLIQGPPGTGKTSTICALVARFMSRRAIPITAPGSK 1342
Query: 305 ---IKCRTLACTPTNVAITELASRV 326
K + L C P+N AI E+A R+
Sbjct: 1343 EVPAKPKILICAPSNAAIDEIAQRL 1367
>gi|156842218|ref|XP_001644478.1| hypothetical protein Kpol_520p43 [Vanderwaltozyma polyspora DSM
70294]
gi|156115121|gb|EDO16620.1| hypothetical protein Kpol_520p43 [Vanderwaltozyma polyspora DSM
70294]
Length = 2267
Score = 173 bits (438), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/295 (36%), Positives = 177/295 (60%), Gaps = 13/295 (4%)
Query: 570 ASLFFSTASSSYK--LHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQ 627
+S+ ST S S L S+ +K + ++IDEA Q E + IPL+ G +++GD Q
Sbjct: 1554 SSIICSTLSGSAHDVLASLGVK-FDTVIIDEACQCTELSAIIPLRYGG-KRCIMVGDPNQ 1611
Query: 628 LPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGA 687
LP V S + + + +SLF R+ N + +LL++QYRM+P+IS+FP+L+FY ++ DG
Sbjct: 1612 LPPTVLSGAASKLNYNQSLFVRIEK-NSTPYLLDVQYRMNPAISVFPSLEFYCGRLKDGP 1670
Query: 688 NVKSKSYEKQYLTGTEFGTYSFINIIGGRED--FIYHSCRNIVEVSAVIKILQKLYKAWV 745
N+++ + ++ + TY F +I+ GR++ S N+ E+ I+++ L K +
Sbjct: 1671 NMEAIT-KRPWHDVAPLSTYRFFDIVSGRQEQNIKTMSYVNMEEIRVAIELIDYLLKKF- 1728
Query: 746 GSKQKVS--IGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTV 803
+K S IG++SPY QV+ +R++ + + V +IDGFQG E++IIIIS V
Sbjct: 1729 ENKYDFSGKIGIISPYKEQVIKMRREFRNFFGSPISKYVDFNTIDGFQGQEKEIIIISCV 1788
Query: 804 RC-NTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
R ++G S+GF+ +R+NVALTRA+ +WILG ++L + +W L+ DAK R
Sbjct: 1789 RASDSGTSVGFLKDFRRMNVALTRAKSSMWILGHHKSL-QNNKLWNHLISDAKER 1842
>gi|222641848|gb|EEE69980.1| hypothetical protein OsJ_29879 [Oryza sativa Japonica Group]
Length = 2215
Score = 173 bits (438), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/305 (35%), Positives = 167/305 (54%), Gaps = 19/305 (6%)
Query: 576 TASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQL--AGINHAVLIGDECQLPAMVE 633
TAS++ ++ E + +VIDEAAQ E + IPLQL + +++GD QLPA V
Sbjct: 1606 TASANKFVNFSEHALFDVVVIDEAAQALEPATLIPLQLLKSKGTKCIMVGDPKQLPATVM 1665
Query: 634 SKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKS 693
S ++ + + S+FERL + +L QYRMHP IS FP+L FY N++LDGA KS
Sbjct: 1666 SGLASKFLYECSMFERLQRAGYPVIMLTKQYRMHPEISRFPSLHFYENKLLDGAQAADKS 1725
Query: 694 YEKQYLTGTEFGTYSFINIIGGRE----DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQ 749
+ G Y F ++ GRE + S N E A ++IL L +
Sbjct: 1726 --APFHGHDCLGPYMFFDVADGREQCGKNAATQSLCNQFEAEAALEILGFLKNRYPSEFS 1783
Query: 750 KVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGG 809
IG+++PY +Q+ +R + + + +++ ++DGFQG E DI+++STVR +
Sbjct: 1784 CRKIGIITPYRSQLSLLRSRFNSFFGPEIVAEMEINTVDGFQGREVDILVLSTVRASNSS 1843
Query: 810 ----------SIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQC 859
SIGF++ +R+NVALTRAR LWI+G+ +TL + S W +L+ +AK R
Sbjct: 1844 DSRHHTGEARSIGFVADVRRMNVALTRARFSLWIVGNAKTL-QTNSHWASLLQNAKERNL 1902
Query: 860 FFNAD 864
F + +
Sbjct: 1903 FISVN 1907
>gi|336370055|gb|EGN98396.1| hypothetical protein SERLA73DRAFT_109860 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382798|gb|EGO23948.1| hypothetical protein SERLADRAFT_450249 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1935
Score = 172 bits (437), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 182/321 (56%), Gaps = 12/321 (3%)
Query: 549 DELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNF--LVIDEAAQLKESE 606
D L T K +E + A + ST S + H V ++ L+F ++IDEAAQ E
Sbjct: 1479 DRRTLDATRRKFRVE--VLQEADVICSTLSGAG--HDV-LEQLDFEMVIIDEAAQAIELS 1533
Query: 607 STIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLN-HSKHLLNIQYR 665
S IPL+ +++GD QLP V S+ + + + +SLF RL + HLL+IQYR
Sbjct: 1534 SLIPLKFK-CQRCIMVGDPQQLPPTVLSQEACKFQYNQSLFVRLQKHRPEAVHLLSIQYR 1592
Query: 666 MHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRE-DFIYHSC 724
MHP IS P+ FY+ ++LDG ++ K+ ++ + + +FGTY F N+ G+E + HS
Sbjct: 1593 MHPDISQLPSRIFYQGRLLDGPDMDVKT-KQPWHSHPKFGTYRFFNVSKGQEQEAGGHSL 1651
Query: 725 RNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKV 784
+N +E + + +L K + +G+V+ Y QV+ +++ + + V
Sbjct: 1652 KNNLESQVAVAMYSRLCKEFPAIDFDFRVGIVTMYRGQVLELKRAFQRRFGSDIISKVHF 1711
Query: 785 KSIDGFQGGEEDIIIISTVRCNTG-GSIGFISKPQRVNVALTRARHCLWILGSERTLISS 843
++DGFQG E+D+II+S VR G S+GF++ +R+NVA+TRAR L+ILG+ TL S
Sbjct: 1712 HTVDGFQGQEKDVIILSCVRAGPGLQSVGFLADVRRMNVAITRARSSLFILGNAPTLERS 1771
Query: 844 ESIWGALVCDAKARQCFFNAD 864
+ W ++V DA++R F + D
Sbjct: 1772 DENWRSIVNDARSRSFFTDTD 1792
Score = 46.2 bits (108), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 37/142 (26%)
Query: 256 TLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCR------- 308
++NE Q A+L L+ G LI GPPGTGKT T+ L+ + + R
Sbjct: 1274 SVNEPQAKAILGSLQA------QGFVLIQGPPGTGKTSTICGLVEAFMSRRPRPATAIHV 1327
Query: 309 --------------TLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFG 354
L C P+N A+ E+A R +KE Y+ R + ++ G
Sbjct: 1328 GRGQRPTDKAPPKKALLCAPSNAAVDEVAHR----LKEGYRGAERRGAAL----KVVRVG 1379
Query: 355 NKDRLKVNPGFEEIYLNYRIKK 376
N D++ +N ++I L+Y +++
Sbjct: 1380 N-DKV-MNISVKDISLDYLVEQ 1399
>gi|334182633|ref|NP_173124.2| hydrolase domain-containing protein [Arabidopsis thaliana]
gi|332191377|gb|AEE29498.1| hydrolase domain-containing protein [Arabidopsis thaliana]
Length = 2127
Score = 172 bits (437), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/285 (36%), Positives = 159/285 (55%), Gaps = 20/285 (7%)
Query: 591 LNFLVIDEAAQLKESESTIPLQL--AGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
+ +VIDEAAQ E + IPLQL + +++GD QLPA V S ++ + + S+FE
Sbjct: 1617 FDAVVIDEAAQALEPATLIPLQLLKSRGTKCIMVGDPKQLPATVLSNVASKFLYECSMFE 1676
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKS---YEKQYLTGTEFG 705
RL + +L QYRMHP I FP++ FY N++L+G ++ SKS +E +L G
Sbjct: 1677 RLQRAGYPILMLTQQYRMHPEICRFPSMHFYDNKLLNGVDMSSKSAPFHENHHL-----G 1731
Query: 706 TYSFINIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQV 763
Y F +I+ G+E S N E A +++L+ K + IG+++PY Q+
Sbjct: 1732 PYVFYDIVDGQEHRSGDSSSVCNEQEAEAAVQLLRFFKKRYPSEFVAGRIGIITPYKRQL 1791
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGS-------IGFISK 816
+R + + + +++ ++DGFQG E DI+++STVR IGF++
Sbjct: 1792 AVLRSRFTGAFGAQVTADMEMNTVDGFQGKEVDILVLSTVRATHSAPDGVNQSRIGFVAD 1851
Query: 817 PQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFF 861
+R+NVALTRA+ LW+LG+ RTL + WGALV DAK R+
Sbjct: 1852 VRRMNVALTRAKLSLWVLGNTRTLQRDHN-WGALVKDAKEREVII 1895
>gi|154280609|ref|XP_001541117.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411296|gb|EDN06684.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 2150
Score = 172 bits (436), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 168/293 (57%), Gaps = 8/293 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E + IPL+ G + +L+GD QLP V SK++ + +SLF R+ +
Sbjct: 1542 VVIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSKVASRFQYEQSLFVRMQA- 1599
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH K HLL+ QYRMHP IS FP+ FY ++ DG ++ +K + + + G Y F +
Sbjct: 1600 NHPKDVHLLDTQYRMHPEISRFPSAAFYDGRLKDGPDM-AKLRVRPWHSSELLGPYRFFD 1658
Query: 712 IIGGREDFI-YHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G HS N+ E+ +K+ ++L ++ K IG+++PY Q+ ++ +
Sbjct: 1659 VQGLHSSAPKSHSLVNLAELRVAMKLYERLTIDYLTYDFKGKIGIITPYKGQLREMKNQF 1718
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
+Y + TV+ + D FQG E ++II S VR + G IGF++ +R+NV LTRA+
Sbjct: 1719 ANKYGSSIFTTVEFNTTDAFQGRECEVIIFSCVRASNRG-IGFLADIRRMNVGLTRAKSS 1777
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEI 883
LW+LG+ ++L+ E W L+ DA++R + D + L + ++ + EL ++
Sbjct: 1778 LWVLGNSQSLVQGE-FWNGLITDAQSRNLYTQGDILKLLQRPQISLDMELKDV 1829
>gi|357163474|ref|XP_003579743.1| PREDICTED: probable helicase DDB_G0274399-like isoform 3
[Brachypodium distachyon]
Length = 780
Score = 172 bits (435), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/295 (35%), Positives = 159/295 (53%), Gaps = 7/295 (2%)
Query: 570 ASLFFSTAS-SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 628
A++ FST S S + S + + ++IDEAAQ E + +PL + G L+GD QL
Sbjct: 420 AAIVFSTLSFSGSTVFSRMTRSFDVVIIDEAAQAVEPATLVPL-VHGCRQVFLVGDPVQL 478
Query: 629 PAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
PA V S + + G+G SLF+R + +L IQYRMHP IS+FP+ +FY + DG
Sbjct: 479 PATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGILQDGEG 538
Query: 689 VKSKSYEKQYLTGTEFGTYSFINIIG-GREDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
+ K Y + FG + F +I G + S N EV + I +L +
Sbjct: 539 LNKKRPWHSY---SCFGPFCFFDIDGIESQPSGSGSWVNEDEVEFITLIYHQLATHYPEL 595
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT 807
K + V+SPY+ QV ++ + + ++ + V ++DGFQG E++++I S VRCN
Sbjct: 596 KSSSQVAVISPYSLQVKLLKDRFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNK 655
Query: 808 GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFN 862
+IGF+S +R+NVA+TRAR + ++GS TL + W LV AK R FF
Sbjct: 656 EQNIGFVSDFRRMNVAITRARSAVLVIGSASTL-KQDKHWNNLVESAKERDRFFT 709
>gi|340975658|gb|EGS22773.1| 5'-3' RNA helicase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1993
Score = 171 bits (434), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/274 (37%), Positives = 153/274 (55%), Gaps = 7/274 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G N +L+GD QLP V S+ + + G+ +SLF R+
Sbjct: 1569 VIIDEAAQCVELSALIPLKY-GCNKCILVGDPKQLPPTVLSQSAAKYGYDQSLFVRMQK- 1626
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH K HLL++QYRMHP IS FP+ +FY + DGA++ ++ + + G Y F +
Sbjct: 1627 NHPKDVHLLDMQYRMHPEISRFPSKEFYEGLLQDGADM-ARLRLQPWHQSVLLGPYRFFD 1685
Query: 712 IIGGREDFIYH-SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G +E + S N EV +++ + + IG+++PY AQ+ +R+K
Sbjct: 1686 VKGSQERGPKNQSLVNEEEVKVAMQLYMRFRSDYRDIDLTGKIGIITPYKAQLQRLRQKF 1745
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
Y ++ + D FQG E +III S VR + G IGF++ +R+NV LTRAR
Sbjct: 1746 VERYGESITEQIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSS 1805
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
LWILG R L+ E W L+ DAK R + N +
Sbjct: 1806 LWILGDSRALVQGE-FWAKLIEDAKQRDRYTNGN 1838
>gi|115386780|ref|XP_001209931.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114190929|gb|EAU32629.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 2086
Score = 171 bits (434), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 157/274 (57%), Gaps = 8/274 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + +L+GD QLP V SK++ + + +SLF R+ +
Sbjct: 1545 VIIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSKVASKFQYEQSLFVRMQA- 1602
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH + HLL+IQYRMHP IS FP+ FY ++ DG ++ ++ + + G G Y F +
Sbjct: 1603 NHPRDVHLLDIQYRMHPEISAFPSSTFYDGKLQDGPDM-ARLRTRPWHQGELLGPYRFFD 1661
Query: 712 IIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G + HS N+ E+ +++ ++L + G IG+++PY Q+ ++ +
Sbjct: 1662 VQGLHQSAAKGHSLINMAELRVAMQLYERLSTDFRGIDFAGKIGIITPYKGQLREMKNQF 1721
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
Y N+ + + D FQG E ++II S VR + G IGF+S +R+NV LTRA+
Sbjct: 1722 AARYGNEIFSKIDFNTTDAFQGRESEVIIFSCVRASNKG-IGFLSDIRRMNVGLTRAKSS 1780
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
LW+LG+ ++L+ E W L+ DA+ R + D
Sbjct: 1781 LWVLGNSQSLVQGE-FWNGLIKDARRRNVYTEGD 1813
>gi|327306928|ref|XP_003238155.1| tRNA-splicing endonuclease [Trichophyton rubrum CBS 118892]
gi|326458411|gb|EGD83864.1| tRNA-splicing endonuclease [Trichophyton rubrum CBS 118892]
Length = 2196
Score = 171 bits (434), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 164/291 (56%), Gaps = 10/291 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + VL+GD QLP V SK + + +SLF R+ +
Sbjct: 1568 VIIDEAAQSIELSALIPLKY-GCSKCVLVGDPKQLPPTVLSKEASRFQYEQSLFVRMQA- 1625
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF-GTYSFI 710
NH HLL+ QYRMHP IS FP+ FY ++ DG + K+ G+E G Y F
Sbjct: 1626 NHPNDVHLLDTQYRMHPEISKFPSQAFYDGKLQDGPAMGP--LRKKPWHGSELLGPYRFF 1683
Query: 711 NIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKK 769
++ G HS NI E++ +++ ++L + + IG+++PY Q+ ++ +
Sbjct: 1684 DVQGMHSSATKGHSLVNIAELTVAMRLYERLLADYRNYEFAGKIGIITPYKGQLRELKSR 1743
Query: 770 IGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+Y + TV+ + D FQG E ++II S VR + G IGF+S +R+NV LTRA+
Sbjct: 1744 FAAKYGSSIFTTVEFNTTDAFQGRECEVIIFSCVRASDRG-IGFLSDIRRMNVGLTRAKS 1802
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKEL 880
LW+LG+ ++L+ E W AL+ DA+ RQ + D R L K ++ + EL
Sbjct: 1803 SLWVLGNSQSLVRGE-FWRALIHDARERQLYTEGDILRILQKPQISLDMEL 1852
>gi|326474384|gb|EGD98393.1| tRNA-splicing endonuclease [Trichophyton tonsurans CBS 112818]
Length = 2188
Score = 171 bits (434), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 163/291 (56%), Gaps = 10/291 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + VL+GD QLP V SK + + +SLF R+ +
Sbjct: 1561 VIIDEAAQSIELSALIPLKY-GCSKCVLVGDPKQLPPTVLSKEASRFQYEQSLFVRMQA- 1618
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF-GTYSFI 710
NH HLL+ QYRMHP IS FP+ FY ++ DG + K+ G+E G Y F
Sbjct: 1619 NHPNDVHLLDTQYRMHPEISKFPSQAFYDGKLQDGPGMAP--LRKKPWHGSELLGPYRFF 1676
Query: 711 NIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKK 769
++ G HS NI E++ +++ ++L + IG+++PY Q+ ++ +
Sbjct: 1677 DVQGMHSSAAKGHSLINIAELTVAMRLYERLLADYRNYDFAGKIGIITPYKGQLRELKSR 1736
Query: 770 IGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+Y + TV+ + D FQG E ++II S VR + G IGF+S +R+NV LTRA+
Sbjct: 1737 FAAKYGSSIFTTVEFNTTDAFQGRECEVIIFSCVRASDRG-IGFLSDIRRMNVGLTRAKS 1795
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKEL 880
LW+LG+ ++L+ E W AL+ DA+ RQ + D R L K ++ + EL
Sbjct: 1796 SLWVLGNSQSLVRGE-FWRALIHDARERQLYTEGDILRILQKPQISLDMEL 1845
>gi|426195915|gb|EKV45844.1| hypothetical protein AGABI2DRAFT_72010 [Agaricus bisporus var.
bisporus H97]
Length = 1864
Score = 171 bits (434), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 188/344 (54%), Gaps = 25/344 (7%)
Query: 527 LLQLHQRRSECLSVLRNLWN-------SLDELNLPCTTSKLVLEDFCFKRASLFFSTASS 579
+ QL+ RRS + L + +LD L T K++LE A + ST S
Sbjct: 1473 IAQLNARRSSLAGRMDRLKDEQKSASRTLDALRR-STRQKILLE------ADVICSTLSG 1525
Query: 580 SYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKIS 637
+ H + I+ L+F +++DE+AQ E + IPL+ + +L+GD QLP V S+ +
Sbjct: 1526 AG--HEI-IERLDFDMIIVDESAQAIELSTLIPLKYS-CQRCILVGDPQQLPPTVLSQEA 1581
Query: 638 DEAGFGRSLFERLT-SLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK 696
+ + +SLF R+ S + HLL+IQYRMHP IS P+ FY+ ++ DG ++ K+ +
Sbjct: 1582 SKYRYNQSLFVRMQRSQPDAVHLLSIQYRMHPEISQLPSSVFYQGRLNDGPSMAEKTAQP 1641
Query: 697 QYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS--IG 754
+ FG Y F N+ G E+ HS +N+ E + + +L + + + +G
Sbjct: 1642 WH-KNAHFGIYKFFNVSKGLEEMSRHSIKNLAECHVAVALFNRLRREYGQDMSDIDYRVG 1700
Query: 755 VVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG-GSIGF 813
+VS Y AQ+ ++++ + + V ++DGFQG E+DIII+S VR G ++GF
Sbjct: 1701 IVSMYRAQIAELKRQFEQRFGKEILSRVDFNTVDGFQGQEKDIIILSCVRAGPGLQTVGF 1760
Query: 814 ISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
+S +R+NVALTRA+ L+ILG+ TL S+ W +V DA+ R
Sbjct: 1761 LSDVRRMNVALTRAKSSLYILGNAATLERSDPNWRRIVGDARGR 1804
>gi|322709665|gb|EFZ01241.1| putative SEN1 protein [Metarhizium anisopliae ARSEF 23]
Length = 2049
Score = 171 bits (434), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 152/274 (55%), Gaps = 7/274 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G +L+GD QLP V S+ + G+ +SLF R+
Sbjct: 1575 VIIDEAAQCVELSALIPLKY-GCCKCILVGDPKQLPPTVLSQSAARFGYDQSLFVRMQQ- 1632
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH K HLL++QYRMHP IS+FP+ +FY Q+ DG ++ ++ + + G Y F +
Sbjct: 1633 NHPKSVHLLDMQYRMHPEISMFPSKEFYEGQLQDGQDMLQLRHQPWHQSAL-LGPYRFFD 1691
Query: 712 IIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G +E S N E+ +++ + K + IG+++PY AQ+ +R +
Sbjct: 1692 VEGVQEKGRKGQSLVNTRELQVAMEMYDRFSKEYKQCDLTGKIGIITPYKAQLFELRNRF 1751
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
Y ++ + D FQG E +III S VR ++ G IGF++ +R+NV LTRA+
Sbjct: 1752 TSRYGENITDIIEFNTTDAFQGRECEIIIFSCVRASSTGGIGFMTDIRRMNVGLTRAKSS 1811
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
LWILG R L+ E W L+ DAKAR + D
Sbjct: 1812 LWILGDSRALVQGE-FWKKLIEDAKARDRYTKGD 1844
Score = 50.8 bits (120), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 98/235 (41%), Gaps = 56/235 (23%)
Query: 175 YKVKARNN-MQVHDKTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSVVDER 233
Y+V +RNN + + + + +TN+ +R + +L + ++ ++L +
Sbjct: 1247 YRVASRNNQLSTLLMPGVTVYGVKITNMTTIEREYAALESLQYYDLMDEIL--------K 1298
Query: 234 CELCSVQRKGQWDEKFGPSFSS-TLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKT 292
E + R G+ EK + + TLN Q A+L G LI GPPGTGKT
Sbjct: 1299 AEPSPILRYGE--EKISNTMQNWTLNHGQAVAVLGA------QDNDGFTLIQGPPGTGKT 1350
Query: 293 KTVSMLLLTLLRIKC----------------------------RTLACTPTNVAITELAS 324
KT++ ++ +LL + + L C P+N A+ EL
Sbjct: 1351 KTITAMVGSLLSEQLAQASNGVPMGAPLRPLAGAIPAGQGRPKKLLVCAPSNAAVDEL-- 1408
Query: 325 RVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRE 379
VL+L K K S PI ++L G D +N +++ L+ ++ E
Sbjct: 1409 -VLRL-KSGVKTSSGKTKPI----NVLRLGRSD--AINAAVKDVTLDELVRNRME 1455
>gi|396463537|ref|XP_003836379.1| similar to tRNA-splicing endonuclease [Leptosphaeria maculans JN3]
gi|312212932|emb|CBX93014.1| similar to tRNA-splicing endonuclease [Leptosphaeria maculans JN3]
Length = 1964
Score = 171 bits (434), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/277 (36%), Positives = 152/277 (54%), Gaps = 13/277 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DEAAQ E + IPL+ G +L+GD QLP V SK + + +SLF R+
Sbjct: 1520 VIVDEAAQCVEMSALIPLKY-GCAKCILVGDPKQLPPTVFSKEAARFQYEQSLFVRMQK- 1577
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYS 708
NH HLL+ QYRMHP ISLFP+ FY ++LDG A ++ K + + L G Y
Sbjct: 1578 NHPDDVHLLDTQYRMHPEISLFPSQTFYDGKLLDGGDMAGLRKKPWHQSML----LGPYR 1633
Query: 709 FINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F ++ G +E HS N+ E+ I++ +L + K +G+++PY +Q+ ++
Sbjct: 1634 FFDVQGQQEAAPKGHSLINMKEIDIAIQLYTRLISDYPDYDFKGKVGIITPYKSQLRELK 1693
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ + K + + D FQG E +III S VR + G IGF+ +R+NV LTRA
Sbjct: 1694 ARFMARFGEKTDEMIDFNTTDAFQGRESEIIIFSCVRASPAGGIGFLQDIRRMNVGLTRA 1753
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
+ LW+LG+ ++L+ E W LV DAK R + D
Sbjct: 1754 KSSLWVLGNSQSLMRGE-FWKKLVLDAKNRDRYTGGD 1789
>gi|357163471|ref|XP_003579742.1| PREDICTED: probable helicase DDB_G0274399-like isoform 2
[Brachypodium distachyon]
Length = 820
Score = 171 bits (433), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/295 (35%), Positives = 159/295 (53%), Gaps = 7/295 (2%)
Query: 570 ASLFFSTAS-SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 628
A++ FST S S + S + + ++IDEAAQ E + +PL + G L+GD QL
Sbjct: 460 AAIVFSTLSFSGSTVFSRMTRSFDVVIIDEAAQAVEPATLVPL-VHGCRQVFLVGDPVQL 518
Query: 629 PAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
PA V S + + G+G SLF+R + +L IQYRMHP IS+FP+ +FY + DG
Sbjct: 519 PATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGILQDGEG 578
Query: 689 VKSKSYEKQYLTGTEFGTYSFINIIG-GREDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
+ K Y + FG + F +I G + S N EV + I +L +
Sbjct: 579 LNKKRPWHSY---SCFGPFCFFDIDGIESQPSGSGSWVNEDEVEFITLIYHQLATHYPEL 635
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT 807
K + V+SPY+ QV ++ + + ++ + V ++DGFQG E++++I S VRCN
Sbjct: 636 KSSSQVAVISPYSLQVKLLKDRFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNK 695
Query: 808 GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFN 862
+IGF+S +R+NVA+TRAR + ++GS TL + W LV AK R FF
Sbjct: 696 EQNIGFVSDFRRMNVAITRARSAVLVIGSASTL-KQDKHWNNLVESAKERDRFFT 749
>gi|449533284|ref|XP_004173606.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
isoform 1 [Cucumis sativus]
Length = 176
Score = 171 bits (433), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/125 (68%), Positives = 101/125 (80%), Gaps = 1/125 (0%)
Query: 740 LYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIII 799
++ A V SK K+SIGVVSPY+AQVV I++KIG +Y N +GF VKV S+DGFQGGEEDIII
Sbjct: 1 MFVACVDSKGKMSIGVVSPYSAQVVTIQRKIGKKY-NCNGFNVKVSSVDGFQGGEEDIII 59
Query: 800 ISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQC 859
ISTV CNTG SIGF+S QR NVALTRAR+CLWILG+ +TL S S+W LV DAK R C
Sbjct: 60 ISTVWCNTGSSIGFLSSNQRTNVALTRARYCLWILGNFKTLSKSNSVWEELVMDAKNRGC 119
Query: 860 FFNAD 864
FFNA+
Sbjct: 120 FFNAN 124
>gi|310791058|gb|EFQ26587.1| helicase sen1 [Glomerella graminicola M1.001]
Length = 2076
Score = 171 bits (433), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 168/620 (27%), Positives = 267/620 (43%), Gaps = 113/620 (18%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTN 316
LN Q A+L G LI GPPGTGKTKT+ ++ +LL T P
Sbjct: 1335 LNPGQAKAILGAR------DNDGFTLIQGPPGTGKTKTIIAMVGSLL-----TGNIQPPG 1383
Query: 317 VAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYR--I 374
AI KLV ++ + +C N +E+ L + +
Sbjct: 1384 TAIKP------KLVGQAAQNSMPKKLLVC-------------APSNTAVDELVLRLKQGV 1424
Query: 375 KKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEG 434
K + F ++ R S I+ V+ + +KL+ + QS+ KE R +
Sbjct: 1425 KTMNGSFHKINVLRLGRSDAINAAVRDVTLDELVKQKLQ----GDTTQSKAKEERDKMHN 1480
Query: 435 SKGERKPFLKYVRERFKCA-VVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGN 493
+ + L +R + A RN S + SF + LK + G
Sbjct: 1481 DAAKIRDELAEIRPKLDEARAAGDRNL----------SQALQRSFDQ---LKRAQINIGA 1527
Query: 494 LLFQD----NVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLD 549
+ +D N S+E E +R+R + Q LD
Sbjct: 1528 KIDEDKASGNTASREAE---------------IRRRQIQQ----------------EILD 1556
Query: 550 ELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTI 609
+ C T + FK ++ F T ++IDEAAQ E + I
Sbjct: 1557 GAQVLCATLSGSGHEM-FKNLNVEFET-----------------VIIDEAAQCVELSALI 1598
Query: 610 PLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSK--HLLNIQYRMH 667
PL+ G +L+GD QLP V S+ + G+ +SLF R+ NH HLL+ QYRMH
Sbjct: 1599 PLKY-GCTKCILVGDPKQLPPTVLSQSAARFGYDQSLFVRMQQ-NHPDYVHLLDRQYRMH 1656
Query: 668 PSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGR-EDFIYHSCRN 726
P ISLFP+++FY +++DG ++ + + + T G Y F ++ G + + S N
Sbjct: 1657 PEISLFPSMEFYEGKLVDGEDMSALRCQPWHATAL-LGPYRFFDVEGTQSKGSKGRSLVN 1715
Query: 727 IVEVSAVIKILQKLYKAWVGSKQKVS--IGVVSPYTAQVVAIRKKIGFEYENKDGFTVKV 784
E+ +++ ++ +KA G + IG+++PY AQ+ ++ + ++ + ++
Sbjct: 1716 HAELKVAMQLYER-FKADFGRNYDIKGKIGIITPYKAQLQELKWQFSRQFGDNITDDIEF 1774
Query: 785 KSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSE 844
+ D FQG E +III S VR + G IGF+ +R+NV LTRA+ LWILG R L+ E
Sbjct: 1775 NTTDAFQGRECEIIIFSCVRADPTGGIGFVKDIRRMNVGLTRAKSSLWILGDSRALVQGE 1834
Query: 845 SIWGALVCDAKARQCFFNAD 864
W L+ +AK R + D
Sbjct: 1835 -FWNKLIDNAKQRSLYTKGD 1853
>gi|151940946|gb|EDN59328.1| splicing endonuclease [Saccharomyces cerevisiae YJM789]
Length = 2232
Score = 171 bits (433), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 158/271 (58%), Gaps = 8/271 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E S IPL+ G +++GD QLP V S + + +SLF R+
Sbjct: 1588 VIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK- 1645
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
N S +LL++QYRMHPSIS FP+ +FY+ ++ DG + + ++ + F Y F +II
Sbjct: 1646 NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILN-KRPWHQLEPFAPYKFFDII 1704
Query: 714 GGRED--FIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS-IGVVSPYTAQVVAIRKKI 770
GR++ S N+ E+ I+++ L++ + IG++SPY Q+ +RK+
Sbjct: 1705 SGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEF 1764
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC-NTGGSIGFISKPQRVNVALTRARH 829
+ ++ +IDGFQG E++II+IS VR +T S+GF+ +R+NVALTRA+
Sbjct: 1765 ARYFGGMINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKT 1824
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCF 860
+W+LG +R+L S+ +W L+ DAK R C
Sbjct: 1825 SIWVLGHQRSLAKSK-LWRDLIEDAKDRSCL 1854
>gi|226500364|ref|NP_001146818.1| uncharacterized protein LOC100280423 [Zea mays]
gi|219888873|gb|ACL54811.1| unknown [Zea mays]
Length = 399
Score = 171 bits (433), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 114/340 (33%), Positives = 174/340 (51%), Gaps = 15/340 (4%)
Query: 570 ASLFFSTAS-SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 628
A++ FST S S + S + + ++IDEAAQ E + IPL + G L+GD QL
Sbjct: 37 AAIVFSTLSFSGSSIFSRMTRAFDVVIIDEAAQAVEPATLIPL-IHGCRQIFLVGDPVQL 95
Query: 629 PAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
PA V S+ + + G+G SLF+R + +L IQYRMHP IS FP+ +FY + DG
Sbjct: 96 PATVISQTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISTFPSKEFYEGVLQDGEG 155
Query: 689 VKSKSYEKQYLTGTEFGTYSFINIIG-GREDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
+ K Y + FG + F ++ G + S N EV + + +L +
Sbjct: 156 LSRKRPWHSY---SCFGPFCFFDVDGIESQPSGSGSWVNQDEVEFITLLYHQLALRYPEL 212
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT 807
K +GV+SPY QV ++ + ++ + V ++DGFQG E++I+I S VRCN
Sbjct: 213 KSSPEVGVISPYRHQVKLLKDSFRSTFGDQSRELIDVSTVDGFQGREKEIVIFSCVRCNK 272
Query: 808 GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADE-- 865
IGF+S +R+NVA+TRA+ + ++GS TL + W LV AK R C F +
Sbjct: 273 EQKIGFVSDFRRMNVAITRAKSAVLVVGSASTL-KQDKHWNNLVESAKERNCLFKVPKPL 331
Query: 866 -----ERNLAKARLEVSKELVEIGAESLTSTSQGGKKEEF 900
E NL ++E + E+ A L +Q ++E
Sbjct: 332 TAFFAEDNLKTMKVE-RRPPPELNARVLEEINQEVVRQEL 370
>gi|297735762|emb|CBI18449.3| unnamed protein product [Vitis vinifera]
Length = 2154
Score = 171 bits (432), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/289 (36%), Positives = 160/289 (55%), Gaps = 26/289 (8%)
Query: 594 LVIDEAAQLKESESTIPLQL--AGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT 651
+VIDEAAQ E + IPLQL + +++GD QLPA V S ++ + + S+FERL
Sbjct: 1635 VVIDEAAQALEPATLIPLQLLKSSGTRCIMVGDPKQLPATVLSSVASKFRYQCSMFERLQ 1694
Query: 652 SLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
+ +L QYRMHP I FP+L FY +++L+G N+ SK G G Y F +
Sbjct: 1695 RAGYPVTMLTKQYRMHPEICRFPSLHFYDSKLLNGENMSSKLAPFHETEG--LGPYVFFD 1752
Query: 712 IIGGREDFIYHSCR----NIVEVSAVIKILQKLYK----AWVGSKQKVSIGVVSPYTAQV 763
++ G+E +S N E A +++L+ K +VG + IG+++PY Q+
Sbjct: 1753 VVDGQESHGRNSGTFSLCNEREADAAVEVLRLFRKRHPSEFVGGR----IGIITPYKCQL 1808
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR----CNTG-----GSIGFI 814
+R + + + ++ ++DGFQG E DI+++STVR C+ SIGF+
Sbjct: 1809 SLLRSRFSSAFGSSITSDMEFNTVDGFQGREVDILVLSTVRAAGPCSAASGINSSSIGFV 1868
Query: 815 SKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
+ +R+NVALTRA+ LWILG+ RTL + W ALV DAK R +A
Sbjct: 1869 ADVRRMNVALTRAKLSLWILGNARTL-QTNCNWAALVKDAKERNLVISA 1916
Score = 45.4 bits (106), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 24/96 (25%)
Query: 255 STLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT----VSMLLLTLLR------ 304
S+ N SQ+ A+ + D + LI GPPGTGKT+T VS LL + L+
Sbjct: 1425 SSYNSSQLQAISVAIASPDSKKNFDLSLIQGPPGTGKTRTIVAIVSGLLASPLKGVNMKN 1484
Query: 305 --------------IKCRTLACTPTNVAITELASRV 326
++ R L C +N A+ EL SR+
Sbjct: 1485 SVDGKQSLKPMGTSVRQRVLICAQSNAAVDELVSRI 1520
>gi|116193595|ref|XP_001222610.1| hypothetical protein CHGG_06515 [Chaetomium globosum CBS 148.51]
gi|88182428|gb|EAQ89896.1| hypothetical protein CHGG_06515 [Chaetomium globosum CBS 148.51]
Length = 2053
Score = 171 bits (432), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 100/277 (36%), Positives = 158/277 (57%), Gaps = 13/277 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + +L+GD QLP V S+ + G+ +SLF R+
Sbjct: 1568 VIIDEAAQCVELSALIPLKY-GCSKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQK- 1625
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANV---KSKSYEKQYLTGTEFGTYS 708
NH+K HLL++QYRMHP IS FP+ +FY + DGA++ + + + + L G Y
Sbjct: 1626 NHAKDVHLLDMQYRMHPEISKFPSKEFYEGLLQDGADMGQLRMQPWHQSEL----LGPYR 1681
Query: 709 FINIIGGREDFIYH-SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F ++ G + + S N E+ +++ + + + K IG+++PY AQ+ +R
Sbjct: 1682 FFDVKGSQSRGPRNQSLVNDEELKVAMQLYHRFRTDYGNVELKGKIGIITPYKAQLFRLR 1741
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
++ +Y + ++ + D FQG E +III S VR + G IGF++ +R+NV LTRA
Sbjct: 1742 QRFAEKYGDGIAEEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRA 1801
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
R LWILG R L+ E WG L+ DAK R + + +
Sbjct: 1802 RSSLWILGDSRALVQGE-FWGKLIEDAKERDRYTSGN 1837
>gi|378730540|gb|EHY56999.1| senataxin [Exophiala dermatitidis NIH/UT8656]
Length = 2264
Score = 171 bits (432), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 160/274 (58%), Gaps = 8/274 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + +L+GD QLP V S+ + + + +SLF R+ +
Sbjct: 1548 VIIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSREAAKFQYEQSLFARMEN- 1605
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH K HLL+ QYRMHP+ISLFP+ FY +++ DGA++ +K + + F Y F +
Sbjct: 1606 NHKKDVHLLDTQYRMHPAISLFPSKTFYDSRLKDGADM-AKLRRRPWHQSDLFAPYRFFD 1664
Query: 712 IIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G + HS NI E++ +++ +L K IGV++PY Q+ ++ +
Sbjct: 1665 VQGMSQAAPKGHSLVNIAELNVAMQLYDRLVKDVPKYDFAGKIGVITPYKGQLKELKLRF 1724
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
Y ++ + D FQG E +III S VR +T G IGF++ +R+NV LTRA+
Sbjct: 1725 TQRYGQDITSKIEFNTTDAFQGRESEIIIFSCVRASTHG-IGFLNDIRRMNVGLTRAKSS 1783
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
LW+LG+ ++L+ E W ALV DAKAR + + D
Sbjct: 1784 LWVLGNSQSLMQGE-YWRALVNDAKARNVYTHGD 1816
>gi|322701388|gb|EFY93138.1| putative SEN1 protein [Metarhizium acridum CQMa 102]
Length = 2082
Score = 171 bits (432), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 153/277 (55%), Gaps = 13/277 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G +L+GD QLP V S+ + G+ +SLF R+
Sbjct: 1560 VIIDEAAQCVELSALIPLKY-GCCKCILVGDPKQLPPTVLSQSAARFGYDQSLFVRMQQ- 1617
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANV---KSKSYEKQYLTGTEFGTYS 708
NH + HLL++QYRMHP IS+FP+ +FY Q+ DG ++ + + + + L G Y
Sbjct: 1618 NHPRSVHLLDMQYRMHPEISMFPSKEFYEGQLQDGQDMLQLRQQPWHQSAL----LGPYR 1673
Query: 709 FINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F ++ G +E S N E+ ++I + K + IG+++PY AQ+ +R
Sbjct: 1674 FFDVEGVQEKGRKGQSLVNTRELQVAMEIYDRFSKEYKQCDLTGKIGIITPYKAQLFELR 1733
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ Y ++ + D FQG E +III S VR ++ G IGF++ +R+NV LTRA
Sbjct: 1734 NRFTSRYGENITDIIEFNTTDAFQGRECEIIIFSCVRASSTGGIGFMTDIRRMNVGLTRA 1793
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
+ LWILG R L+ E W L+ DAKAR + D
Sbjct: 1794 KSSLWILGDSRALVQGE-FWKKLIEDAKARDRYTKGD 1829
Score = 50.4 bits (119), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 97/231 (41%), Gaps = 56/231 (24%)
Query: 175 YKVKARNN-MQVHDKTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSVVDER 233
Y+V +RNN + + + + +TN+ +R + +L + ++ ++L +
Sbjct: 1232 YRVASRNNQLSTLLMPGVTVYGVKITNMTTIEREYAALESLQYYDLMDEIL--------K 1283
Query: 234 CELCSVQRKGQWDEKFGPSFSS-TLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKT 292
E + R G+ EK + + TLN Q A+L G LI GPPGTGKT
Sbjct: 1284 AEPSPILRYGE--EKISNAMQNWTLNHGQAVAVLGA------QDNDGFTLIQGPPGTGKT 1335
Query: 293 KTVSMLLLTLLRIKC----------------------------RTLACTPTNVAITELAS 324
KT++ ++ +LL + + L C P+N A+ EL
Sbjct: 1336 KTITAMVGSLLSEQLAQVSNGVPVGAPLRPSAGAIPAAQGRPKKLLVCAPSNAAVDEL-- 1393
Query: 325 RVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIK 375
VL+L K K S PI ++L G D +N +++ L+ ++
Sbjct: 1394 -VLRL-KSGIKTSSGKTKPI----NVLRLGRSD--AINAAVKDVTLDELVR 1436
>gi|268637806|ref|XP_002649136.1| hypothetical protein DDB_G0285243 [Dictyostelium discoideum AX4]
gi|256012898|gb|EEU04084.1| hypothetical protein DDB_G0285243 [Dictyostelium discoideum AX4]
Length = 2069
Score = 171 bits (432), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 113/315 (35%), Positives = 175/315 (55%), Gaps = 18/315 (5%)
Query: 569 RASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQ 627
R+ + ST S S Y K + +++DEAAQ E + IPL+ + +L+GD Q
Sbjct: 1584 RSQIILSTLSGSGYDYLFTATKNFDLVIVDEAAQAVELSTLIPLR-HDVKKCILVGDPQQ 1642
Query: 628 LPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGA 687
LP SK++ + + SLF+RL + + +L QYRMHP IS FP+ FYR ++ DG
Sbjct: 1643 LPPTTISKVATKFQYEISLFQRLMNCGMAPTVLKTQYRMHPMISKFPSKIFYRGELEDGK 1702
Query: 688 NVKSKSYEKQYL--TGTEFGTYSFINIIG--GREDFIYHSCRNIVEVSAVIKILQKLYKA 743
NV + Y++ Y + + FG F ++ G + S RN EV I+ +L
Sbjct: 1703 NV--REYKQDYYNDSASRFGPLVFYDLFDKHGEVRSSFFSLRNPTEVKLAKLIVDQLISN 1760
Query: 744 WVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTV 803
+ +K + IGV++PY +Q V + Y+N V+V +IDGFQG E+D +I S+V
Sbjct: 1761 YPNTKD-LEIGVITPYKSQSVDLFNAFK-GYQN-----VEVSTIDGFQGKEKDFVIFSSV 1813
Query: 804 RCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAK-ARQCFFN 862
R ++G SIGF+S +R+NV LTRA++ + ILG+ +L+S+ WG LV D + C+F
Sbjct: 1814 RAHSGHSIGFLSDIRRMNVGLTRAKYSMVILGNS-SLLSNNDDWGNLVNDLRQTNNCYFP 1872
Query: 863 ADEERNLAKARLEVS 877
+++ K LE S
Sbjct: 1873 I-SSKSIDKGVLEKS 1886
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 17/132 (12%)
Query: 206 RIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAM 265
R + +LHM G + T ++ ++ S + +K S+LNESQ+ A+
Sbjct: 1324 REYMALHMVGKIPLGTSIISPHLYINSNDSSSSTFK---IPDKLFQKLRSSLNESQLSAI 1380
Query: 266 LACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI---------KCRTLACTPTN 316
+ L+ L G L+ GPPGTGKTKT+ LL + + L C P+N
Sbjct: 1381 ASTLKNL-----GGFSLLQGPPGTGKTKTILSLLSVFTTVLTNIEKSHSDPKILVCAPSN 1435
Query: 317 VAITELASRVLK 328
A+ E+A R+ K
Sbjct: 1436 AAVDEIALRIKK 1447
>gi|146421053|ref|XP_001486478.1| hypothetical protein PGUG_02149 [Meyerozyma guilliermondii ATCC 6260]
Length = 1359
Score = 171 bits (432), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/268 (35%), Positives = 158/268 (58%), Gaps = 9/268 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT-S 652
++IDEA Q E + IPL+ G +++GD QLP V S+ + + +SLF R+
Sbjct: 923 VIIDEACQCVELSAIIPLRY-GCTKCIMVGDPKQLPPTVLSQTAASLNYDKSLFVRMQEQ 981
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
S +LL++QYRMHP IS FP+ +FYR+++ DGA + K+ + + + F Y F +I
Sbjct: 982 FPDSAYLLDVQYRMHPDISRFPSAEFYRSRLHDGAGMLEKN-TRPWHSEVPFSPYRFFDI 1040
Query: 713 IGGREDFIYHSCR---NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKK 769
+G + + S R N E V++++ L + + IGV+SPY Q+ ++
Sbjct: 1041 VGKHQQ--HESSRSLYNRAEAQVVLEMVDHLMYMLPPKEFRGRIGVISPYKEQIRTLKDI 1098
Query: 770 IGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+Y + V ++DG+QG E++III+S VR + G++GF+S +R+NVALTRAR
Sbjct: 1099 FAKKYGRQIWNEVDFNTVDGYQGQEKEIIIMSCVRASETGNVGFLSDVRRMNVALTRART 1158
Query: 830 CLWILGSERTLISSESIWGALVCDAKAR 857
LWILG++++L+ ++ +W L+ DA R
Sbjct: 1159 TLWILGNQKSLMRNK-VWSRLLQDASDR 1185
Score = 48.9 bits (115), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 24/88 (27%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLL---------LTLLRI-- 305
+NESQ A+++ +RSG LI GPPGTGKTKT+ ++ L L+ +
Sbjct: 684 VNESQANAIIST------HNRSGFSLIQGPPGTGKTKTILGIVGYNLSQDVPLGLIEVDG 737
Query: 306 -------KCRTLACTPTNVAITELASRV 326
+ L C P+N A+ EL R+
Sbjct: 738 QQGKPQTSSKILVCAPSNAAVDELVVRL 765
>gi|190346052|gb|EDK38051.2| hypothetical protein PGUG_02149 [Meyerozyma guilliermondii ATCC 6260]
Length = 1359
Score = 170 bits (431), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 96/268 (35%), Positives = 158/268 (58%), Gaps = 9/268 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT-S 652
++IDEA Q E + IPL+ G +++GD QLP V S+ + + +SLF R+
Sbjct: 923 VIIDEACQCVELSAIIPLRY-GCTKCIMVGDPKQLPPTVLSQTAASLNYDKSLFVRMQEQ 981
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
S +LL++QYRMHP IS FP+ +FYR+++ DGA + K+ + + + F Y F +I
Sbjct: 982 FPDSAYLLDVQYRMHPDISRFPSAEFYRSRLHDGAGMLEKN-TRPWHSEVPFSPYRFFDI 1040
Query: 713 IGGREDFIYHSCR---NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKK 769
+G + + S R N E V++++ L + + IGV+SPY Q+ ++
Sbjct: 1041 VGKHQQ--HESSRSLYNRAEAQVVLEMVDHLMYMLPPKEFRGRIGVISPYKEQIRTLKDI 1098
Query: 770 IGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+Y + V ++DG+QG E++III+S VR + G++GF+S +R+NVALTRAR
Sbjct: 1099 FAKKYGRQIWNEVDFNTVDGYQGQEKEIIIMSCVRASETGNVGFLSDVRRMNVALTRART 1158
Query: 830 CLWILGSERTLISSESIWGALVCDAKAR 857
LWILG++++L+ ++ +W L+ DA R
Sbjct: 1159 TLWILGNQKSLMRNK-VWSRLLQDASDR 1185
Score = 47.0 bits (110), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 24/88 (27%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL------------- 303
+NESQ A+++ +RSG LI GPPGTGKTKT+ ++ L
Sbjct: 684 VNESQANAIIST------HNRSGFSLIQGPPGTGKTKTILGIVGYNLSQDVPSGLIEVDG 737
Query: 304 -----RIKCRTLACTPTNVAITELASRV 326
+ + L C P+N A+ EL R+
Sbjct: 738 QQGKPQTSSKILVCAPSNAAVDELVVRL 765
>gi|302656653|ref|XP_003020078.1| hypothetical protein TRV_05851 [Trichophyton verrucosum HKI 0517]
gi|291183859|gb|EFE39454.1| hypothetical protein TRV_05851 [Trichophyton verrucosum HKI 0517]
Length = 2139
Score = 170 bits (431), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 162/291 (55%), Gaps = 10/291 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + VL+GD QLP V SK + + +SLF R+ +
Sbjct: 1553 VIIDEAAQSIELSALIPLKY-GCSKCVLVGDPKQLPPTVLSKEASRFQYEQSLFVRMQA- 1610
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF-GTYSFI 710
NH HLL+ QYRMHP IS FP+ FY ++ DG + K+ G+E G Y F
Sbjct: 1611 NHPNDVHLLDTQYRMHPEISKFPSQAFYDGKLQDGPGMAP--LRKKPWHGSELLGPYRFF 1668
Query: 711 NIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKK 769
++ G HS NI E++ +++ ++L + IG+++PY Q+ ++ +
Sbjct: 1669 DVQGMHSSAAKGHSLVNIAELTVAMRLYERLVADYRNYDFAGKIGIITPYKGQLRELKSR 1728
Query: 770 IGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+Y + V+ + D FQG E ++II S VR + G IGF+S +R+NV LTRA+
Sbjct: 1729 FAAKYGSSIFTAVEFNTTDAFQGRECEVIIFSCVRASDRG-IGFLSDIRRMNVGLTRAKS 1787
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKEL 880
LW+LG+ ++L+ E W AL+ DA+ RQ + D R L K ++ + EL
Sbjct: 1788 SLWVLGNSQSLVRGE-FWRALIHDARERQLYTEGDILRILQKPQISLDMEL 1837
>gi|159122655|gb|EDP47776.1| tRNA-splicing endonuclease, putative [Aspergillus fumigatus A1163]
Length = 2076
Score = 170 bits (430), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 167/302 (55%), Gaps = 8/302 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E + IPL+ G + +L+GD QLP V SK++ + + +SLF R+ +
Sbjct: 1544 VVIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSKVASKFQYEQSLFVRMQA- 1601
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH K HLL+ QYRMHP IS++P+ FY ++ DG N+ +K + + G Y F +
Sbjct: 1602 NHPKDVHLLDTQYRMHPEISVYPSAAFYDGKLKDGPNM-AKLRARPWHQSELLGPYRFFD 1660
Query: 712 IIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G ++ HS N+ E+ +++ ++L + IG+++PY Q+ ++ +
Sbjct: 1661 VQGLHQNTTKGHSLINLAELRVAMQLYERLITDFREYDFSGKIGIITPYKGQLRELKTQF 1720
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
Y N V + D FQG E ++II S VR + G IGF++ +R+NV LTRA+
Sbjct: 1721 AARYGNAIFNMVDFNTTDAFQGRESEVIIFSCVRASNKG-IGFLADIRRMNVGLTRAKSS 1779
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAESLTS 890
LW+LG+ ++L+ E W L+ DA+ R + + D L + + K + + AES
Sbjct: 1780 LWVLGNSQSLVQGE-FWNGLIKDARRRNVYTDGDILGILQRPQFTGYKNIDMMDAESPNP 1838
Query: 891 TS 892
T+
Sbjct: 1839 TA 1840
Score = 43.5 bits (101), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 34/107 (31%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL--------------------RIKCRT------LACTPT 315
LI GPPG+GKTKT+ L+ LL R+ RT L C P+
Sbjct: 1312 LIQGPPGSGKTKTIVALVGALLSNVLGDQGVTISRPTGVTNPRVPGRTTTSKKLLVCAPS 1371
Query: 316 NVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVN 362
N A+ EL R + VK + R + N ++ G D + N
Sbjct: 1372 NAAVDELVMRFKEGVKTIHGRHEKLN--------VIRLGRSDAINTN 1410
>gi|70984729|ref|XP_747871.1| tRNA-splicing endonuclease [Aspergillus fumigatus Af293]
gi|66845498|gb|EAL85833.1| tRNA-splicing endonuclease, putative [Aspergillus fumigatus Af293]
Length = 2076
Score = 170 bits (430), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 167/302 (55%), Gaps = 8/302 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E + IPL+ G + +L+GD QLP V SK++ + + +SLF R+ +
Sbjct: 1544 VVIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSKVASKFQYEQSLFVRMQA- 1601
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH K HLL+ QYRMHP IS++P+ FY ++ DG N+ +K + + G Y F +
Sbjct: 1602 NHPKDVHLLDTQYRMHPEISVYPSAAFYDGKLKDGPNM-AKLRARPWHQSELLGPYRFFD 1660
Query: 712 IIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G ++ HS N+ E+ +++ ++L + IG+++PY Q+ ++ +
Sbjct: 1661 VQGLHQNTTKGHSLINLAELRVAMQLYERLITDFREYDFSGKIGIITPYKGQLRELKTQF 1720
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
Y N V + D FQG E ++II S VR + G IGF++ +R+NV LTRA+
Sbjct: 1721 AARYGNAIFNMVDFNTTDAFQGRESEVIIFSCVRASNKG-IGFLADIRRMNVGLTRAKSS 1779
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAESLTS 890
LW+LG+ ++L+ E W L+ DA+ R + + D L + + K + + AES
Sbjct: 1780 LWVLGNSQSLVQGE-FWNGLIKDARRRNVYTDGDILGILQRPQFTGYKNIDMMDAESPNP 1838
Query: 891 TS 892
T+
Sbjct: 1839 TA 1840
Score = 43.5 bits (101), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 34/107 (31%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL--------------------RIKCRT------LACTPT 315
LI GPPG+GKTKT+ L+ LL R+ RT L C P+
Sbjct: 1312 LIQGPPGSGKTKTIVALVGALLSNVLGDQGVTISRPTGVTNPRVPGRTTTSKKLLVCAPS 1371
Query: 316 NVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVN 362
N A+ EL R + VK + R + N ++ G D + N
Sbjct: 1372 NAAVDELVMRFKEGVKTIHGRHEKLN--------VIRLGRSDAINTN 1410
>gi|402075170|gb|EJT70641.1| DNA-binding protein SMUBP-2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 2075
Score = 170 bits (430), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 166/306 (54%), Gaps = 10/306 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + VL+GD QLP V S+ + G+ +SLF R+
Sbjct: 1590 VIIDEAAQCVELSALIPLKY-GASKCVLVGDPKQLPPTVLSQSAARYGYDQSLFVRMQQN 1648
Query: 654 NHSK-HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ +K HLL+ QYRMHP ISLFP+ +FY ++ DG ++ +K ++ + G Y F ++
Sbjct: 1649 HPTKVHLLDCQYRMHPEISLFPSKEFYEGRLADGDDM-AKLRQQPWHENPLLGPYRFFDV 1707
Query: 713 IGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVG--SKQKVSIGVVSPYTAQVVAIRKK 769
G +E S N EVS ++I + + K IG+++PY AQ+ A+R++
Sbjct: 1708 EGIQERGNRGQSLVNTNEVSVALQIFNRFSTDFSSRCGDLKGKIGIITPYKAQLHALRQR 1767
Query: 770 IGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
Y ++ + D FQG E +III S VR + G IGF++ +R+NV LTRAR
Sbjct: 1768 FLDRYGEAVLEQIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARS 1827
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAESLT 889
LW+LG R L W L+ DAKAR + + +A+ R + + +GA +
Sbjct: 1828 SLWVLGDSRAL-KQGPFWAKLIEDAKARDRYTSGS---IMAQLRSAATSRPMPMGAVPMQ 1883
Query: 890 STSQGG 895
+ S G
Sbjct: 1884 APSSNG 1889
Score = 44.7 bits (104), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 38/148 (25%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL--RIKC------- 307
LN+ Q A++ + G L+ GPPGTGKTKT+ ++ LL IK
Sbjct: 1341 LNKGQASAII------NAKENDGFTLVQGPPGTGKTKTIIAMVGALLTGNIKINKPPPVP 1394
Query: 308 -------------RTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFG 354
+ L C P+N A+ EL R+ +K++ + + N +L G
Sbjct: 1395 VRPGVNGEAPMARKLLVCAPSNAAVDELVLRLKAGIKDTNGQMHKIN--------VLRLG 1446
Query: 355 NKDRLKVNPGFEEIYLNYRIKKLRECFA 382
D VN +++ L+ +K+ + A
Sbjct: 1447 RSD--AVNQAVKDVTLDELVKEKMDALA 1472
>gi|149241697|ref|XP_001526342.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450465|gb|EDK44721.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 2053
Score = 170 bits (430), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 159/272 (58%), Gaps = 5/272 (1%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL-TS 652
++IDEA Q E + IPL+ G +++GD QLP V S+ + + +SLF R+ T+
Sbjct: 1591 VIIDEACQCLELSAIIPLRY-GCRKCIMVGDPNQLPPTVLSQAASSFNYEQSLFVRMQTN 1649
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
S +LLN+QYRMHP IS FP+ +FY++++ DG N++ K+ ++ + + Y F +I
Sbjct: 1650 YPDSVYLLNVQYRMHPQISQFPSAEFYQSKLKDGPNMEEKN-KRPWHSIKPLSPYRFFDI 1708
Query: 713 IGGR-EDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
++ + S N+ E ++++QKL +G++SPY Q+ I+
Sbjct: 1709 ASRHTKNELTRSLFNLEEARICLQLVQKLITLIPQQAFAGKVGIISPYKEQIRTIKDVFV 1768
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
EY + ++DGFQG E++III+S VR + G++GF+S +R+NVALTRAR L
Sbjct: 1769 REYGKIILNEIDFNTVDGFQGQEKEIIIMSCVRASADGNVGFLSDVRRMNVALTRARTTL 1828
Query: 832 WILGSERTLISSESIWGALVCDAKARQCFFNA 863
WILG+ +L+ ++ +W L+ DA+ R NA
Sbjct: 1829 WILGNRESLLRNK-VWNRLLKDAEQRNAVTNA 1859
>gi|294909689|ref|XP_002777827.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
gi|239885789|gb|EER09622.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
Length = 959
Score = 170 bits (430), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 97/275 (35%), Positives = 156/275 (56%), Gaps = 6/275 (2%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
+ +V+DEA+Q E + IPLQ+ G VL+GD QLPA V S ++ G+G+SLF+RL
Sbjct: 547 FDTVVVDEASQGVEMGTLIPLQM-GCQRMVLVGDPKQLPATVFSATAERFGYGKSLFQRL 605
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFI 710
+ +LL+ Q+RMHP+I+ FP+ +FY + + N+ ++ + FG SF
Sbjct: 606 QQSDFQVNLLSTQFRMHPAIAEFPSNEFYDGGVKNAENIMELVGDQPWSHIPIFGPVSFF 665
Query: 711 NIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
N + G+E+ Y S N E + +I I + L W + + V+SPY QV IR+K
Sbjct: 666 N-VPGQEEKSYTSLTNEAEANFIIHIFKMLQVCWPKEPWREKLAVISPYAEQVRLIRQKF 724
Query: 771 GFEYENKDGFT--VKVKSIDGFQGGEEDIIIISTVRCNTGG-SIGFISKPQRVNVALTRA 827
Y + V+V ++DGFQG E+D +++STVR + S+GF+ +R+NV+LTR
Sbjct: 725 RQLYNMVESKVCPVEVNTVDGFQGREKDCVVVSTVRADPDATSVGFVRDVRRMNVSLTRG 784
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFN 862
R LW+ G +R ++S+ W + + + + FN
Sbjct: 785 RTNLWVCGHQR-MLSNNPHWKSFIVKQQKAKRLFN 818
>gi|302499595|ref|XP_003011793.1| hypothetical protein ARB_02022 [Arthroderma benhamiae CBS 112371]
gi|291175346|gb|EFE31153.1| hypothetical protein ARB_02022 [Arthroderma benhamiae CBS 112371]
Length = 2117
Score = 170 bits (430), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 162/291 (55%), Gaps = 10/291 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + VL+GD QLP V SK + + +SLF R+ +
Sbjct: 1554 VIIDEAAQSIELSALIPLKY-GCSKCVLVGDPKQLPPTVLSKEASRFQYEQSLFVRMQA- 1611
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF-GTYSFI 710
NH HLL+ QYRMHP IS FP+ FY ++ DG + K+ G+E G Y F
Sbjct: 1612 NHPNDVHLLDTQYRMHPEISKFPSQAFYDGKLQDGPGMAP--LRKKPWHGSELLGPYRFF 1669
Query: 711 NIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKK 769
++ G HS NI E++ +++ ++L + IG+++PY Q+ ++ +
Sbjct: 1670 DVQGMHSSAAKGHSLVNIAELTVAMRLYERLLADYRNYDFAGKIGIITPYKGQLRELKSR 1729
Query: 770 IGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+Y + V+ + D FQG E ++II S VR + G IGF+S +R+NV LTRA+
Sbjct: 1730 FAAKYGSSIFTAVEFNTTDAFQGRECEVIIFSCVRASDRG-IGFLSDIRRMNVGLTRAKS 1788
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKEL 880
LW+LG+ ++L+ E W AL+ DA+ RQ + D R L K ++ + EL
Sbjct: 1789 SLWVLGNSQSLVRGE-FWRALIYDARERQLYTEGDILRILQKPQISLDMEL 1838
>gi|308807350|ref|XP_003080986.1| tRNA-splicing endonuclease positive effector-related (ISS)
[Ostreococcus tauri]
gi|116059447|emb|CAL55154.1| tRNA-splicing endonuclease positive effector-related (ISS)
[Ostreococcus tauri]
Length = 958
Score = 170 bits (430), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 168/305 (55%), Gaps = 10/305 (3%)
Query: 562 LEDFCFKRASLFFSTAS-SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAV 620
L+ + AS+ ST S S + S K + ++IDEAAQ E + IPL +G
Sbjct: 525 LKQAILEEASVVCSTLSFSGSGMFSRMSKTFDAVIIDEAAQAVEPSTLIPL-CSGAKQVF 583
Query: 621 LIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYR 680
L+GD QLPA V + I+ + G+ S+F+R S + H+L QYRMHPSI +FP++ FY
Sbjct: 584 LVGDPRQLPATVLNSIAIDHGYDTSMFKRFQSCGYPVHVLKTQYRMHPSIRVFPSMLFYD 643
Query: 681 NQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKL 740
N+++DG + K +++ + F + F ++ G HS N E ++ ++Q L
Sbjct: 644 NELIDGPGL-DKLTTRRWHKHSVFRPFVFFDVKGKERASAGHSWVNDEESEFIVALVQTL 702
Query: 741 YKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIII 800
+ + + V+SPY AQV IR+ I + K V V +IDGFQG E+DI I
Sbjct: 703 FARFPELIAGEHVAVISPYKAQVRNIRRLIKEKLGAKKALRVDVNTIDGFQGHEKDICIF 762
Query: 801 STVRC------NTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDA 854
S VR ++GG +GF++ +R+NV LTRAR L+++G+ + I + WG+LV A
Sbjct: 763 SVVRAPKRGAGSSGGGLGFVADERRINVGLTRARSSLFVVGAAES-IKGDDRWGSLVESA 821
Query: 855 KARQC 859
+ R C
Sbjct: 822 RRRNC 826
>gi|403415166|emb|CCM01866.1| predicted protein [Fibroporia radiculosa]
Length = 1926
Score = 170 bits (430), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 153/275 (55%), Gaps = 5/275 (1%)
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS 652
+VIDEAAQ E S IPL+ +++GD QLP V+S+ + + G+ +SLF R
Sbjct: 1518 LIVIDEAAQAIELSSLIPLKYR-CRRCIMVGDPQQLPPTVKSQEACKFGYNQSLFVRFQR 1576
Query: 653 LN-HSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
+ HLL+IQYRMHP ISL P+ FY ++ DG ++ +K+ ++ + + + GTY F +
Sbjct: 1577 QRPEAVHLLSIQYRMHPDISLVPSQLFYDRKLQDGPDMATKT-KRPWHSNEKLGTYHFFD 1635
Query: 712 IIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ GGRE+ HS N E I + +L + + +G+VS Y Q+ +R+
Sbjct: 1636 VAGGREEAGRNHSFINRAECQVAIALFNRLRREYSTFDFDYKVGIVSMYRGQIFELRRMF 1695
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG-GSIGFISKPQRVNVALTRARH 829
+ V ++DGFQG E+D+II+S VR ++GF+ +R+NVALTRA+
Sbjct: 1696 EQRFGADISSIVDFHTVDGFQGQEKDVIILSCVRAGPNVQTVGFLRDMRRMNVALTRAKS 1755
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
L++LG TL S+ W ++ DA+ R N D
Sbjct: 1756 SLFVLGHAATLERSDGTWRQIISDARERSRLVNVD 1790
>gi|255081534|ref|XP_002507989.1| predicted protein [Micromonas sp. RCC299]
gi|226523265|gb|ACO69247.1| predicted protein [Micromonas sp. RCC299]
Length = 1002
Score = 169 bits (429), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/268 (36%), Positives = 146/268 (54%), Gaps = 4/268 (1%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
+ +VIDEAAQ E + +PL G L+GD QLPA V S I+ + + +SLF+R
Sbjct: 534 FDVVVIDEAAQAVEPSTLVPL-CYGAKQVFLVGDPRQLPATVLSSIATDHNYDQSLFKRF 592
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFI 710
+ HLL QYRMHP+I FP+ QFY ++ DG + +K+ ++ + F + FI
Sbjct: 593 EQCGYPIHLLKTQYRMHPAIREFPSTQFYSGELEDGPKMAAKT-KRPWHDNMLFRPFVFI 651
Query: 711 NIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
++ G S N E + + ++ L K + IGV+SPY AQV IR+++
Sbjct: 652 DVAGKEYQGGGMSWANDDEATLAVALVATLVKNYAELASGEKIGVISPYKAQVKNIRRRL 711
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGG-SIGFISKPQRVNVALTRARH 829
+ V V SIDGFQG E+D+ I S VR G +GF++ +R+NV LTR++
Sbjct: 712 AETLGEERARKVDVNSIDGFQGREKDVCIFSVVRAPAKGRGLGFVADERRINVGLTRSKS 771
Query: 830 CLWILGSERTLISSESIWGALVCDAKAR 857
L +LGS + L ++ WG LV A+ R
Sbjct: 772 SLIVLGSAKALKGDDN-WGGLVASARDR 798
>gi|42566850|ref|NP_193292.3| protein MAGATAMA 3 [Arabidopsis thaliana]
gi|384950687|sp|B6SFA4.1|MAA3_ARATH RecName: Full=Probable helicase MAGATAMA 3; AltName: Full=SEN1-like
protein
gi|209574484|gb|ACI63222.1| MAA3 [Arabidopsis thaliana]
gi|332658227|gb|AEE83627.1| protein MAGATAMA 3 [Arabidopsis thaliana]
Length = 818
Score = 169 bits (429), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 163/306 (53%), Gaps = 7/306 (2%)
Query: 567 FKRASLFFSTAS-SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDE 625
+ A++ F+T S S L + + + ++IDEAAQ E + IPL L+GD
Sbjct: 459 LEEAAIVFATLSFSGSALLAKSNRGFDVVIIDEAAQAVEPATLIPLA-TRCKQVFLVGDP 517
Query: 626 CQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILD 685
QLPA V S ++ ++G+G S+FERL + +L QYRMHP I FP+ QFY + D
Sbjct: 518 KQLPATVISTVAQDSGYGTSMFERLQKAGYPVKMLKTQYRMHPEIRSFPSKQFYEGALED 577
Query: 686 GANVKSKSYEKQYLTGTEFGTYSFINIIGGRED---FIYHSCRNIVEVSAVIKILQKLYK 742
G+++++++ + + FG + F +I G+E S N+ EV V+ I +L
Sbjct: 578 GSDIEAQT-TRDWHKYRCFGPFCFFDIHEGKESQHPGATGSRVNLDEVEFVLLIYHRLVT 636
Query: 743 AWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIIST 802
+ K + ++SPY QV + + + + V + ++DGFQG E+D+ I S
Sbjct: 637 MYPELKSSSQLAIISPYNYQVKTFKDRFKEMFGTEAEKVVDINTVDGFQGREKDVAIFSC 696
Query: 803 VRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFN 862
VR N G IGF+S +R+NV +TRA+ + ++GS TL S+ +W L+ A+ R F
Sbjct: 697 VRANENGQIGFLSNSRRMNVGITRAKSSVLVVGSAATL-KSDPLWKNLIESAEQRNRLFK 755
Query: 863 ADEERN 868
+ N
Sbjct: 756 VSKPLN 761
>gi|407035278|gb|EKE37635.1| tRNA splicing endonuclease, putative [Entamoeba nuttalli P19]
Length = 1159
Score = 169 bits (429), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/329 (37%), Positives = 181/329 (55%), Gaps = 26/329 (7%)
Query: 523 RKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLF---FSTASS 579
R + + L Q +SE + R+ E+ T +L F+ A + +T+ S
Sbjct: 480 RDAFRVTLQQMKSEKGKIQRDFAKIRKEI-----TKQL------FEEADILCCTLNTSGS 528
Query: 580 SYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDE 639
L+ ++ K N ++IDEAAQ E + IPL+ G +LIGD QLPA V S +
Sbjct: 529 DIFLNCIKEKIEN-VIIDEAAQSVEISTLIPLRF-GAERCILIGDPQQLPATVISVAAQN 586
Query: 640 AGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN--VKSKSYEKQ 697
+G+ RSLFERL S +L IQYRMHP I FP+ QFY +++DG + + S +K
Sbjct: 587 SGYDRSLFERLYKCGVSVDMLKIQYRMHPLIREFPSNQFYSGELIDGRDESILPCSIDKG 646
Query: 698 YLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVS 757
FG F + GG E+ + + N VEV VI +L+ L K + K+ IG+V+
Sbjct: 647 ------FGPVVFYDACGGLEERVGQTLANEVEVQIVIGLLEGLIKKYPNCKE-WDIGIVT 699
Query: 758 PYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFISK 816
PY Q++ I+ I K+ + V +IDGFQG E DIII S VR + SIGF+S
Sbjct: 700 PYRQQLLLIKMAIETSLLLKEMSKLCVNTIDGFQGREMDIIIFSCVRSSQIKPSIGFLSD 759
Query: 817 PQRVNVALTRARHCLWILGSERTLISSES 845
+R+NVALTRA++ LW++G+ TL ++++
Sbjct: 760 IRRMNVALTRAKNALWVIGNSNTLCTNKT 788
Score = 43.9 bits (102), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 20/87 (22%)
Query: 254 SSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK------- 306
++ N SQ+ + + L + G LI GPPGTGKTKT+ +L ++ K
Sbjct: 283 TNIFNSSQIECINSAL------SKKGFSLIQGPPGTGKTKTLLGILGAIIFGKPASFNKQ 336
Query: 307 -------CRTLACTPTNVAITELASRV 326
+ L C P+N A+ E+ R+
Sbjct: 337 GTIKMKHSKILVCAPSNAAVDEIVLRI 363
>gi|16945408|emb|CAC10094.2| related to SEN1 protein [Neurospora crassa]
Length = 2126
Score = 169 bits (429), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 163/308 (52%), Gaps = 11/308 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + +L+GD QLP V S+ + G+ +SLF R+
Sbjct: 1564 VIIDEAAQCVELSALIPLKY-GCSKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQK- 1621
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH K HLL+ QYRMHP IS FP FY + DG ++ +KS + + T G Y F +
Sbjct: 1622 NHEKDVHLLDTQYRMHPEISSFPRAAFYEGLLQDGDDM-AKSRLQPWHRSTLLGPYRFFD 1680
Query: 712 IIGGREDFIYH-SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G +E + S N E+ +++ ++ + K IG+++PY AQ+ +R +
Sbjct: 1681 VRGSQERGPKNQSLVNEEELKVAMQLYRRFKADYGNVDLKGKIGIITPYKAQLYRLRSQF 1740
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
+ + ++ + D FQG E +III S VR + G IGF++ +R+NV LTRAR
Sbjct: 1741 AQRFGDAITDEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSS 1800
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAESLTS 890
LWILG R L+ E W L+ D+K R + N+ + +L E+L
Sbjct: 1801 LWILGDSRALMQGE-FWAKLIEDSKRRDRYTTG----NIMGMLSQAGPQLSAAAFEALAI 1855
Query: 891 TSQGGKKE 898
TS G +E
Sbjct: 1856 TSTGNTRE 1863
>gi|388579514|gb|EIM19837.1| hypothetical protein WALSEDRAFT_40862 [Wallemia sebi CBS 633.66]
Length = 1987
Score = 169 bits (429), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/309 (37%), Positives = 163/309 (52%), Gaps = 23/309 (7%)
Query: 570 ASLFFSTASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQ 627
A + ST S + K E+ P+ F ++IDEAAQ E + IP + G +LIGD+ Q
Sbjct: 1506 ADVVCSTLSGAGKGDLAEL-PVEFETVIIDEAAQAVEVSALIPFKY-GCKRPILIGDQHQ 1563
Query: 628 LPAMVESKISDEAGFGRSLFERLTSLNHSK-HLLNIQYRMHPSISLFPNLQFYRNQILDG 686
LP V S + + G+ RSLF RL N + HLLN QYRMHP IS P+ FY + DG
Sbjct: 1564 LPPTVMSTEASKKGYSRSLFVRLMESNQGRVHLLNEQYRMHPDISKLPSAVFYNGHLKDG 1623
Query: 687 ANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVG 746
+ K+ + + + FGTY F + GG E + HS +N E S VI + ++L K + G
Sbjct: 1624 PMMAEKT-KAPWHSNDLFGTYKFFDFAGG-ERRVDHSYQNPDEASVVISLYERLRKQYGG 1681
Query: 747 S-KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDG---FTVKVKSIDGFQGGEEDIIIIST 802
+ +++ Y QV IR ++ + N D V V ++DGFQG E+ III+ST
Sbjct: 1682 EFSLDYRVAIIATYKQQVRYIRNELKKRFWNVDKDILSKVDVNTVDGFQGQEKTIIILST 1741
Query: 803 VRCNT-----------GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
VR GG IGF+ +R+NVALTRA+ L+I+G L + W +V
Sbjct: 1742 VRSTKFEDDGIYKERGGGPIGFLKDIRRMNVALTRAQSSLFIVGHADKL-KYDQTWQHIV 1800
Query: 852 CDAKARQCF 860
DA+ R
Sbjct: 1801 DDAEQRDLL 1809
Score = 49.3 bits (116), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 23/89 (25%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGV-ELIWGPPGTGKTKTVSMLLLTLLRIKCRTLA---- 311
LNESQ A+L+ L G G LI GPPGTGK+KT+ L+ L ++ + L
Sbjct: 1281 LNESQALAVLSSL----IGPADGAFSLIQGPPGTGKSKTILALVAKFLSMRAKPLVGRTN 1336
Query: 312 --------------CTPTNVAITELASRV 326
C P+N AI E+ +R+
Sbjct: 1337 PNAAENYVPPKILICAPSNAAIDEVVNRL 1365
>gi|407920626|gb|EKG13814.1| hypothetical protein MPH_09028 [Macrophomina phaseolina MS6]
Length = 1990
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/275 (36%), Positives = 156/275 (56%), Gaps = 8/275 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+V+DEAAQ E + IPL+ G A+L+GD QLP V SK + + +SLF R+ +
Sbjct: 1534 VVVDEAAQCVEMSALIPLKY-GCAKAILVGDPKQLPPTVFSKEAARFQYEQSLFVRMQT- 1591
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH HLL+ QYRMHP IS FP+ FY ++LDGA++ + EK + + T Y F +
Sbjct: 1592 NHPNDVHLLDTQYRMHPEISYFPSQTFYDGRLLDGADMAALR-EKPWHSSTLLAPYRFFD 1650
Query: 712 IIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQ-KVSIGVVSPYTAQVVAIRKK 769
+ G + HS NI E+ + + +L + S + IG+++PY +Q+ ++ +
Sbjct: 1651 VQGQHQSAPKGHSLINIAEIDVAMALYSRLMNDFKDSVDLRGKIGIITPYKSQLRELKDR 1710
Query: 770 IGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+Y + V+ + D +QG E +III S VR + G IGF+ +R+NV LTRA+
Sbjct: 1711 FARQYGDTVFEYVEFNTTDAYQGRESEIIIFSCVRASPAGGIGFLQDIRRMNVGLTRAKS 1770
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
LW+LG+ ++L+ + W LV DA+ R+ + D
Sbjct: 1771 SLWVLGNSQSLMRGQ-FWKLLVEDAQKRERYTTGD 1804
>gi|67903368|ref|XP_681940.1| hypothetical protein AN8671.2 [Aspergillus nidulans FGSC A4]
gi|40740903|gb|EAA60093.1| hypothetical protein AN8671.2 [Aspergillus nidulans FGSC A4]
Length = 2234
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/277 (35%), Positives = 158/277 (57%), Gaps = 14/277 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E + IPL+ G + +L+GD QLP V SK++ + + +SLF R+ S
Sbjct: 1543 VVIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSKVASKYQYEQSLFVRMQS- 1600
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYS 708
NH HLL+IQYRMHP+IS+FP FY ++ DG A ++++ + + L Y
Sbjct: 1601 NHPNDVHLLDIQYRMHPAISMFPRTAFYDGRLQDGPDMARLRTRPWHQSEL----LSPYR 1656
Query: 709 FINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F ++ G + HS N E+ +++ ++L K + +G+++PY Q+ ++
Sbjct: 1657 FFDVQGLHQSAPKGHSLVNFAELKVAMQLYERLLKDFKEYDFSGKVGIITPYKGQLRELK 1716
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ +Y N + + D FQG E ++II S VR + G IGF+S +R+NV LTRA
Sbjct: 1717 TQFANKYGNAIFNMIDFNTTDAFQGREAEVIIFSCVRASNKG-IGFLSDIRRMNVGLTRA 1775
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
+ LW+LG+ ++L+ E W +LV DA+ R + + D
Sbjct: 1776 KSSLWVLGNSQSLVQGE-FWRSLVTDARQRNVYTDGD 1811
>gi|296413292|ref|XP_002836348.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630165|emb|CAZ80539.1| unnamed protein product [Tuber melanosporum]
Length = 1971
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/275 (38%), Positives = 150/275 (54%), Gaps = 9/275 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G +L+GD QLP V S+ + + + +SLF R+
Sbjct: 1481 VIIDEAAQSVELSALIPLKF-GCEKCILVGDPKQLPPTVLSREAAKFSYEKSLFVRMQE- 1538
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH K HLL+IQYRMHP IS FP QFY +++ DG N+K E + + Y F N
Sbjct: 1539 NHPKDVHLLSIQYRMHPMISSFPRKQFYDSELEDGENMKELRTEVWHKNPI-YAPYRFFN 1597
Query: 712 IIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
I G HS N E + + + Q+L + + IG+++PY Q+ ++
Sbjct: 1598 IAGQESAGGLHSLVNRQEAQSALSLYQRLTADFPQTNFDGKIGIITPYKQQINLLKTTFR 1657
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
Y T+ + D FQG E DIII S VR + G IGF+S +R+NV LTRA+ L
Sbjct: 1658 DVYGENICDTIDFNTTDAFQGRERDIIIFSCVRASQEGGIGFLSDVRRMNVGLTRAKFSL 1717
Query: 832 WILGSERTLISSESIWGALVCDAKARQCFFNADEE 866
++LG +L+ + +W +LV DAK R F DEE
Sbjct: 1718 FVLGHSTSLMRNR-LWASLVQDAKDRGVF---DEE 1748
Score = 50.1 bits (118), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 42/158 (26%)
Query: 196 IYLTNIL---PNKRIWNSLHMCGNWKVITQ--VLGTDSVVDERCELCSVQRKGQWDEKFG 250
+Y T I+ P +R +++L MC + + Q + S ++E E V+ +G +
Sbjct: 1181 LYATRIMGFVPTEREYSAL-MCLKYYDLEQEILAAKPSSLEEPTEKQIVRTRGLY----- 1234
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC--- 307
+NE Q A+L+ ++ +G LI GPPGTGKTKTV ++ LL K
Sbjct: 1235 -----KVNEPQARAILSAVKN------TGFTLIQGPPGTGKTKTVVGIVGALLTPKVGST 1283
Query: 308 -----------------RTLACTPTNVAITELASRVLK 328
+ L C P+N A+ EL R K
Sbjct: 1284 VIQIPGSMNKSPKPTTKKLLVCAPSNAAVDELVLRFKK 1321
>gi|440634637|gb|ELR04556.1| hypothetical protein GMDG_06846 [Geomyces destructans 20631-21]
Length = 1897
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 150/273 (54%), Gaps = 8/273 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ +L+GD QLP V S ++ E G+ +SLFER+
Sbjct: 1576 VIIDEAAQSIEMSALIPLKY-NCTKCILVGDPKQLPPTVLSTVAAEFGYDQSLFERMQK- 1633
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH HLL+ QYRMHP IS FP +FY +++DGA ++ K +K + G Y F +
Sbjct: 1634 NHPDRIHLLDTQYRMHPEISSFPRGEFYDGELVDGAGLE-KLRQKPWHASALLGPYRFFD 1692
Query: 712 IIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
+ G HS N E+ +++ ++L + K +G+++PY Q+ IR +
Sbjct: 1693 LKGTSSRSGGHSMVNYDEIKVALQLYKRLKTDYPFFDIKGKVGIITPYKGQLREIRFALQ 1752
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
EY + + + D FQG E ++II S VR T G +GF+ +R+NV LTRA+ L
Sbjct: 1753 REYGDDILDDIDTNTTDAFQGREAEVIIFSCVR--TMGGVGFLKDVRRMNVGLTRAKSSL 1810
Query: 832 WILGSERTLISSESIWGALVCDAKARQCFFNAD 864
W++G TL + +W ++ DAK R F + D
Sbjct: 1811 WVIGDSSTL-QRDRVWSNMIQDAKRRDRFTSGD 1842
>gi|242038133|ref|XP_002466461.1| hypothetical protein SORBIDRAFT_01g008150 [Sorghum bicolor]
gi|241920315|gb|EER93459.1| hypothetical protein SORBIDRAFT_01g008150 [Sorghum bicolor]
Length = 818
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 158/294 (53%), Gaps = 7/294 (2%)
Query: 570 ASLFFSTAS-SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 628
A++ FST S S + S + + ++IDEAAQ E + IPL + G L+GD QL
Sbjct: 456 AAIVFSTLSFSGSSIFSRMSRAFDVVIIDEAAQAVEPATLIPL-VHGCRQIFLVGDPVQL 514
Query: 629 PAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
PA V S+ + + G+G SLF+R + +L IQYRMHP IS+FP+ +FY + DG
Sbjct: 515 PATVISQTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISMFPSKEFYEGVLQDGEG 574
Query: 689 VKSKSYEKQYLTGTEFGTYSFINIIG-GREDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
+ K Y + FG + F ++ G + S N EV + + +L +
Sbjct: 575 LSRKRPWHSY---SCFGPFCFFDVDGIESQPSGSGSWVNQDEVEFITLLYHQLAMRYPEL 631
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT 807
K +GV+SPY QV ++ + ++ + V ++DGFQG E++I+I S VRCN
Sbjct: 632 KSSPEVGVISPYRHQVKLLKDSFRSTFGDQSKELIDVSTVDGFQGREKEIVIFSCVRCNE 691
Query: 808 GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFF 861
IGF+S +R+NVA+TRA+ + ++GS TL + W LV AK R FF
Sbjct: 692 EQKIGFVSDFRRMNVAITRAKSAVLVVGSASTL-KQDKHWNNLVESAKERNRFF 744
>gi|350297309|gb|EGZ78286.1| hypothetical protein NEUTE2DRAFT_102083 [Neurospora tetrasperma FGSC
2509]
Length = 2078
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 170/318 (53%), Gaps = 12/318 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + +L+GD QLP V S+ + G+ +SLF R+
Sbjct: 1564 VIIDEAAQCVELSALIPLKY-GCSKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQK- 1621
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH K HLL+ QYRMHP IS FP FY + DG ++ +KS + + T G Y F +
Sbjct: 1622 NHEKDVHLLDTQYRMHPEISSFPRAAFYEGLLQDGDDM-AKSRLQPWHRSTLLGPYRFFD 1680
Query: 712 IIGGREDFIYH-SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G +E + S N E+ +++ ++ + K IG+++PY AQ+ +R +
Sbjct: 1681 VRGSQERGPKNQSLVNEEELKVAMQLYRRFKADYGNVDLKGKIGIITPYKAQLYRLRSQF 1740
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
+ + ++ + D FQG E +III S VR + G IGF++ +R+NV LTRAR
Sbjct: 1741 AQRFGDTITDEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSS 1800
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAESLT- 889
LWILG R L+ E W L+ D+K R + + L++A ++S E A + T
Sbjct: 1801 LWILGDSRALMQGE-FWAKLIEDSKRRDRYTTGNIMGMLSQAGPQLSAAAFEALAITSTD 1859
Query: 890 ----STSQGGKKEEFEFE 903
ST G K+E E +
Sbjct: 1860 NTRESTPSGIKREVVEVK 1877
>gi|366997484|ref|XP_003678504.1| hypothetical protein NCAS_0J01870 [Naumovozyma castellii CBS 4309]
gi|342304376|emb|CCC72166.1| hypothetical protein NCAS_0J01870 [Naumovozyma castellii CBS 4309]
Length = 2314
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 158/274 (57%), Gaps = 8/274 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E S IPL+ G +++GD QLP V S + + +SLF R+
Sbjct: 1556 VIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK- 1613
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
N + +LL++QYRMHP IS FP+ +FY ++ DG N++ + + T + F Y F +I+
Sbjct: 1614 NTTPYLLDVQYRMHPEISKFPSAEFYNGRLKDGPNMEEVNMRPWHST-SPFSPYKFFDIV 1672
Query: 714 GGR--EDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS-IGVVSPYTAQVVAIRKKI 770
G+ ++ S N+ E+ ++++ L++ + IGV+SPY Q+ +RK+
Sbjct: 1673 SGKQQQNKKTMSYINMEEIQVALELVDSLFQQFENRIDFTGKIGVISPYREQMQRMRKEF 1732
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC-NTGGSIGFISKPQRVNVALTRARH 829
+ V +IDGFQG E++IIIIS VR +T S+GF+ +R+NVA TRA+
Sbjct: 1733 LRYFGGTIMQYVDFNTIDGFQGQEKEIIIISCVRADDTQSSVGFLKDFRRMNVAFTRAKA 1792
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
LWILG +++LI ++ +W L+ DAK R C A
Sbjct: 1793 SLWILGHQQSLIKNK-LWRDLIIDAKNRNCLTTA 1825
>gi|336463474|gb|EGO51714.1| hypothetical protein NEUTE1DRAFT_70677 [Neurospora tetrasperma FGSC
2508]
Length = 2064
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 170/318 (53%), Gaps = 12/318 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + +L+GD QLP V S+ + G+ +SLF R+
Sbjct: 1564 VIIDEAAQCVELSALIPLKY-GCSKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQK- 1621
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH K HLL+ QYRMHP IS FP FY + DG ++ +KS + + T G Y F +
Sbjct: 1622 NHEKDVHLLDTQYRMHPEISSFPRAAFYEGLLQDGDDM-AKSRLQPWHRSTLLGPYRFFD 1680
Query: 712 IIGGREDFIYH-SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G +E + S N E+ +++ ++ + K IG+++PY AQ+ +R +
Sbjct: 1681 VRGSQERGPKNQSLVNEEELKVAMQLYRRFKADYGNVDLKGKIGIITPYKAQLYRLRSQF 1740
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
+ + ++ + D FQG E +III S VR + G IGF++ +R+NV LTRAR
Sbjct: 1741 AQRFGDTITDEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSS 1800
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAESLT- 889
LWILG R L+ E W L+ D+K R + + L++A ++S E A + T
Sbjct: 1801 LWILGDSRALMQGE-FWAKLIEDSKRRDRYTTGNIMGMLSQAGPQLSAAAFEALAITSTD 1859
Query: 890 ----STSQGGKKEEFEFE 903
ST G K+E E +
Sbjct: 1860 NTRESTPSGIKREVVEVK 1877
>gi|412993880|emb|CCO14391.1| predicted protein [Bathycoccus prasinos]
Length = 1285
Score = 169 bits (428), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 163/320 (50%), Gaps = 32/320 (10%)
Query: 595 VIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLN 654
+IDEA Q E + +P+ G VLIGD+ QLP + S+ +DE G G SLFER+ S
Sbjct: 868 LIDEATQATEPATVVPM-TKGCKQIVLIGDQNQLPPTIISRDADERGLGTSLFERMLSRG 926
Query: 655 HSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIG 714
+L +QYRMHP+I+ FP+ QFY N++L G + + + +F++
Sbjct: 927 IRTFMLKVQYRMHPAIAKFPSQQFYSNELLSGTPPSQRRAPQGFDWPVPAVPLAFVDCPE 986
Query: 715 GREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKV---SIGVVSPYTAQVVAIRKKIG 771
G E S N +E V+ +++KL ++ +V IG+VSPY AQV AI+K +
Sbjct: 987 GEERSDGASQMNTIEAQKVVTLVKKLM-----AEHEVLACDIGIVSPYAAQVRAIKKLLQ 1041
Query: 772 FEYENKDGF----------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVN 821
+ F ++V SIDGFQG E+++I+ S R N G++GF++ +RVN
Sbjct: 1042 PNAVKRTRFDAPAAPDSDAAIEVCSIDGFQGREKEVIVFSCTRANLMGNVGFLADRRRVN 1101
Query: 822 VALTRARHCLWILGSERTLISSESIWG---------ALVCDAKARQCFFNADEERNLAKA 872
V LTRAR L I+G RTL +WG L+C A +AD +LA
Sbjct: 1102 VMLTRARRGLIIVGHLRTLRGEPEVWGPWLTWAGENGLICGLSA----TDADAANSLATI 1157
Query: 873 RLEVSKELVEIGAESLTSTS 892
+ E+ G +TS
Sbjct: 1158 GMSSYAEIGGSGVGETVNTS 1177
>gi|365764213|gb|EHN05738.1| Sen1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 2101
Score = 169 bits (428), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 159/274 (58%), Gaps = 14/274 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E S IPL+ G +++GD QLP V S + + +SLF R+
Sbjct: 1457 VIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK- 1514
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
N S +LL++QYRMHPSIS FP+ +FY+ ++ DG + + ++ + Y F +II
Sbjct: 1515 NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILN-KRPWHQLEPLAPYKFFDII 1573
Query: 714 GGRED--FIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS----IGVVSPYTAQVVAIR 767
GR++ S N+ E+ I+++ L++ + K+ IG++SPY Q+ +R
Sbjct: 1574 SGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKF---DNKIDFTGKIGIISPYREQMQKMR 1630
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC-NTGGSIGFISKPQRVNVALTR 826
K+ + ++ +IDGFQG E++II+IS VR +T S+GF+ +R+NVALTR
Sbjct: 1631 KEFARYFGGMINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTR 1690
Query: 827 ARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
A+ +W+LG +R+L S+ +W L+ DAK R C
Sbjct: 1691 AKTSIWVLGHQRSLAKSK-LWRDLIEDAKDRSCL 1723
>gi|330917057|ref|XP_003297659.1| hypothetical protein PTT_08146 [Pyrenophora teres f. teres 0-1]
gi|330935060|ref|XP_003304815.1| hypothetical protein PTT_17500 [Pyrenophora teres f. teres 0-1]
gi|311318413|gb|EFQ87087.1| hypothetical protein PTT_17500 [Pyrenophora teres f. teres 0-1]
gi|311329531|gb|EFQ94249.1| hypothetical protein PTT_08146 [Pyrenophora teres f. teres 0-1]
Length = 1967
Score = 169 bits (427), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/297 (34%), Positives = 164/297 (55%), Gaps = 10/297 (3%)
Query: 576 TASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESK 635
+ S ++E++ + +++DEAAQ E + IPL+ G +L+GD QLP + SK
Sbjct: 1505 SGSGHNMFRTIEVE-FDTVIVDEAAQCVEMSALIPLKY-GCAKCILVGDPKQLPPTIFSK 1562
Query: 636 ISDEAGFGRSLFERLTSLNHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKS 693
+ + +SLF R+ NH HLL+ QYRMHP ISLFP+ FY ++LDG ++ S
Sbjct: 1563 EAARFRYAQSLFMRMQQ-NHPNDVHLLDTQYRMHPEISLFPSQTFYDGKLLDGGDMASLR 1621
Query: 694 YEKQYLTGTEFGTYSFINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVS 752
++ + + G Y F ++ G ++ S NI E++ +++ +L + K
Sbjct: 1622 -KQPWHQSSLLGPYRFFDVKGQQQKAPSGKSLMNIAEINVALQLYNRLTSDYPDYNFKGK 1680
Query: 753 IGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIG 812
IG+++PY +Q+ I+++ Y + + D FQG E +III S VR N G IG
Sbjct: 1681 IGIITPYKSQLQEIKQRFMKAYGQTIIEDIDFNTTDAFQGRESEIIIFSCVRAN--GGIG 1738
Query: 813 FISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNL 869
F+ +R+NV LTRA+ LW+LG+ +L S E W L+ +A+AR+ F + D R L
Sbjct: 1739 FLDDVRRMNVGLTRAKSSLWVLGNSASLQSGE-FWNKLIVNAQARKRFTDGDISRML 1794
Score = 43.9 bits (102), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 71/177 (40%), Gaps = 39/177 (22%)
Query: 188 KTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDE 247
+TK F Y ++P ++ N H N + T++ S+ E L +Q DE
Sbjct: 1191 RTKAHFEITY--RLMPGGQLQNVFHK-NNTLLATKIDSITSLEREFAALKGLQYYDLCDE 1247
Query: 248 --KFGPSFSSTLNESQVGAML-----------ACLRRLDCGHRSGVELIWGPPGTGKTKT 294
K PS T +SQ+ ++ A +D G LI GPPG+GKTKT
Sbjct: 1248 IIKAKPSPLLTYKDSQIQPLISNYNVNMAQGKAIKSAID---NDGFTLIQGPPGSGKTKT 1304
Query: 295 VSMLLLTLLRIKCRT--------------------LACTPTNVAITELASRVLKLVK 331
++ ++ +L R L C P+N A+ EL R + +K
Sbjct: 1305 ITAIVGAILSGSFRNRGTNIAVPGQPQSDAAPKKILVCAPSNAAVDELCMRFRQGIK 1361
>gi|172574|gb|AAB63976.1| SEN1 [Saccharomyces cerevisiae]
Length = 2112
Score = 169 bits (427), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 159/274 (58%), Gaps = 14/274 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E S IPL+ G +++GD QLP V S + + +SLF R+
Sbjct: 1468 VIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK- 1525
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
N S +LL++QYRMHPSIS FP+ +FY+ ++ DG + + ++ + Y F +II
Sbjct: 1526 NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILN-KRPWHQLEPLAPYKFFDII 1584
Query: 714 GGRED--FIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS----IGVVSPYTAQVVAIR 767
GR++ S N+ E+ I+++ L++ + K+ IG++SPY Q+ +R
Sbjct: 1585 SGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKF---DNKIDFTGKIGIISPYREQMQKMR 1641
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC-NTGGSIGFISKPQRVNVALTR 826
K+ + ++ +IDGFQG E++II+IS VR +T S+GF+ +R+NVALTR
Sbjct: 1642 KEFARYFGGMINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTR 1701
Query: 827 ARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
A+ +W+LG +R+L S+ +W L+ DAK R C
Sbjct: 1702 AKTSIWVLGHQRSLAKSK-LWRDLIEDAKDRSCL 1734
>gi|259148407|emb|CAY81654.1| Sen1p [Saccharomyces cerevisiae EC1118]
Length = 2230
Score = 169 bits (427), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 157/271 (57%), Gaps = 8/271 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E S IPL+ G +++GD QLP V S + + +SLF R+
Sbjct: 1586 VIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK- 1643
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
N S +LL++QYRMHPSIS FP+ +FY+ ++ DG + + ++ + Y F +II
Sbjct: 1644 NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILN-KRPWHQLEPLAPYKFFDII 1702
Query: 714 GGRED--FIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS-IGVVSPYTAQVVAIRKKI 770
GR++ S N+ E+ I+++ L++ + IG++SPY Q+ +RK+
Sbjct: 1703 SGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEF 1762
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC-NTGGSIGFISKPQRVNVALTRARH 829
+ ++ +IDGFQG E++II+IS VR +T S+GF+ +R+NVALTRA+
Sbjct: 1763 ARYFGGMINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKT 1822
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCF 860
+W+LG +R+L S+ +W L+ DAK R C
Sbjct: 1823 SIWVLGHQRSLAKSK-LWRDLIEDAKDRSCL 1852
>gi|67484740|ref|XP_657590.1| tRNA splicing endonuclease [Entamoeba histolytica HM-1:IMSS]
gi|56474851|gb|EAL52205.1| tRNA splicing endonuclease, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449709011|gb|EMD48361.1| splicing endonuclease positive effector sen1, putative [Entamoeba
histolytica KU27]
Length = 1140
Score = 169 bits (427), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/329 (37%), Positives = 180/329 (54%), Gaps = 26/329 (7%)
Query: 523 RKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLF---FSTASS 579
R + + L Q +SE + R+ E+ T +L F+ A + +T+ S
Sbjct: 480 RDAFRVTLQQMKSEKGKIQRDFAKIRKEI-----TKQL------FEEADILCCTLNTSGS 528
Query: 580 SYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDE 639
L+ ++ K N ++IDEAAQ E + IPL+ G +LIGD QLPA V S +
Sbjct: 529 DIFLNCIKEKIEN-VIIDEAAQSVEISTLIPLRF-GAERCILIGDPQQLPATVISVAAQN 586
Query: 640 AGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN--VKSKSYEKQ 697
+G+ RSLFERL +L IQYRMHP I FP+ QFY +++DG + + S +K
Sbjct: 587 SGYDRSLFERLYKCGVFVDMLKIQYRMHPLIREFPSNQFYSGELIDGRDESILPCSIDKG 646
Query: 698 YLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVS 757
FG F + GG E+ + + N VEV VI +L+ L K + K+ IG+V+
Sbjct: 647 ------FGPVVFYDACGGLEERVGQTLANEVEVQIVIGLLEGLIKKYPNCKE-WDIGIVT 699
Query: 758 PYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFISK 816
PY Q++ I+ I KD + V +IDGFQG E DIII S VR + SIGF+S
Sbjct: 700 PYRQQLLLIKMAIETSLLLKDMSKLCVNTIDGFQGREMDIIIFSCVRSSQIKPSIGFLSD 759
Query: 817 PQRVNVALTRARHCLWILGSERTLISSES 845
+R+NVALTRA++ LW++G+ TL ++++
Sbjct: 760 IRRMNVALTRAKNALWVIGNSNTLCTNKT 788
Score = 43.9 bits (102), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 27/126 (21%)
Query: 228 SVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQV-GAMLACLR--------RLDCGH-- 276
S E LC+VQ PS T + + G L ++ +++C +
Sbjct: 238 SSAREYLSLCTVQHLSLLKTLLKPSLKDTSPSNGIFGKYLQTMKETNIFNSSQIECINSA 297
Query: 277 --RSGVELIWGPPGTGKTKTVSMLLLTLLRIK--------------CRTLACTPTNVAIT 320
+ G LI GPPGTGKTKT+ +L ++ K + L C P+N A+
Sbjct: 298 LSKKGFSLIQGPPGTGKTKTLLGILGAIIFGKPVSFNKQGTIKMKHSKILVCAPSNAAVD 357
Query: 321 ELASRV 326
E+ R+
Sbjct: 358 EIVLRI 363
>gi|256271104|gb|EEU06199.1| Sen1p [Saccharomyces cerevisiae JAY291]
Length = 2231
Score = 169 bits (427), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 157/271 (57%), Gaps = 8/271 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E S IPL+ G +++GD QLP V S + + +SLF R+
Sbjct: 1587 VIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK- 1644
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
N S +LL++QYRMHPSIS FP+ +FY+ ++ DG + + ++ + Y F +II
Sbjct: 1645 NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILN-KRPWHQLEPLAPYKFFDII 1703
Query: 714 GGRED--FIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS-IGVVSPYTAQVVAIRKKI 770
GR++ S N+ E+ I+++ L++ + IG++SPY Q+ +RK+
Sbjct: 1704 SGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEF 1763
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC-NTGGSIGFISKPQRVNVALTRARH 829
+ ++ +IDGFQG E++II+IS VR +T S+GF+ +R+NVALTRA+
Sbjct: 1764 ARYFGGMINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKT 1823
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCF 860
+W+LG +R+L S+ +W L+ DAK R C
Sbjct: 1824 SIWVLGHQRSLAKSK-LWRDLIEDAKDRSCL 1853
>gi|398366241|ref|NP_013534.3| putative DNA/RNA helicase SEN1 [Saccharomyces cerevisiae S288c]
gi|3123282|sp|Q00416.2|SEN1_YEAST RecName: Full=Helicase SEN1; AltName: Full=tRNA-splicing endonuclease
positive effector
gi|664872|gb|AAB67502.1| Sen1p [Saccharomyces cerevisiae]
gi|285813835|tpg|DAA09731.1| TPA: putative DNA/RNA helicase SEN1 [Saccharomyces cerevisiae S288c]
gi|392297931|gb|EIW09030.1| Sen1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 2231
Score = 169 bits (427), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 159/274 (58%), Gaps = 14/274 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E S IPL+ G +++GD QLP V S + + +SLF R+
Sbjct: 1587 VIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK- 1644
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
N S +LL++QYRMHPSIS FP+ +FY+ ++ DG + + ++ + Y F +II
Sbjct: 1645 NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILN-KRPWHQLEPLAPYKFFDII 1703
Query: 714 GGRED--FIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS----IGVVSPYTAQVVAIR 767
GR++ S N+ E+ I+++ L++ + K+ IG++SPY Q+ +R
Sbjct: 1704 SGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKF---DNKIDFTGKIGIISPYREQMQKMR 1760
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC-NTGGSIGFISKPQRVNVALTR 826
K+ + ++ +IDGFQG E++II+IS VR +T S+GF+ +R+NVALTR
Sbjct: 1761 KEFARYFGGMINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTR 1820
Query: 827 ARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
A+ +W+LG +R+L S+ +W L+ DAK R C
Sbjct: 1821 AKTSIWVLGHQRSLAKSK-LWRDLIEDAKDRSCL 1853
>gi|349580123|dbj|GAA25284.1| K7_Sen1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 2233
Score = 169 bits (427), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 159/274 (58%), Gaps = 14/274 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E S IPL+ G +++GD QLP V S + + +SLF R+
Sbjct: 1589 VIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK- 1646
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
N S +LL++QYRMHPSIS FP+ +FY+ ++ DG + + ++ + Y F +II
Sbjct: 1647 NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILN-KRPWHQLEPLAPYKFFDII 1705
Query: 714 GGRED--FIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS----IGVVSPYTAQVVAIR 767
GR++ S N+ E+ I+++ L++ + K+ IG++SPY Q+ +R
Sbjct: 1706 SGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKF---DNKIDFTGKIGIISPYREQMQKMR 1762
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC-NTGGSIGFISKPQRVNVALTR 826
K+ + ++ +IDGFQG E++II+IS VR +T S+GF+ +R+NVALTR
Sbjct: 1763 KEFARYFGGMINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTR 1822
Query: 827 ARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
A+ +W+LG +R+L S+ +W L+ DAK R C
Sbjct: 1823 AKTSIWVLGHQRSLAKSK-LWRDLIEDAKDRSCL 1855
>gi|367042072|ref|XP_003651416.1| hypothetical protein THITE_2111680 [Thielavia terrestris NRRL 8126]
gi|346998678|gb|AEO65080.1| hypothetical protein THITE_2111680 [Thielavia terrestris NRRL 8126]
Length = 2051
Score = 169 bits (427), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 154/274 (56%), Gaps = 7/274 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + +L+GD QLP V S+ + G+ +SLF R+
Sbjct: 1566 VIIDEAAQCVELSALIPLKY-GCSKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQK- 1623
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH+K HLL++QYRMHP IS FP+ FY + DGA++ K + + G Y F +
Sbjct: 1624 NHAKDVHLLDMQYRMHPEISRFPSKVFYEGLLQDGADM-GKLRLQPWHQSVLLGPYRFFD 1682
Query: 712 IIGGREDFIYH-SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G +E + S N E+ +++ ++ + K IG+++PY AQ+ +R++
Sbjct: 1683 VKGSQERGPKNQSLVNEEELKVALQLYRRFRTDYSNVDLKGKIGIITPYKAQLFRLRQRF 1742
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
+Y ++ + D FQG E +III S VR + G IGF++ +R+NV LTRA+
Sbjct: 1743 TEKYGEGITEEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRAKSS 1802
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
LWILG R L+ E W L+ DAK R + N +
Sbjct: 1803 LWILGDSRALVQGE-FWAKLIEDAKQRDRYTNGN 1835
>gi|190405466|gb|EDV08733.1| nuclear-localized tRNA splicing complex component [Saccharomyces
cerevisiae RM11-1a]
Length = 2231
Score = 169 bits (427), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 157/271 (57%), Gaps = 8/271 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E S IPL+ G +++GD QLP V S + + +SLF R+
Sbjct: 1587 VIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK- 1644
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
N S +LL++QYRMHPSIS FP+ +FY+ ++ DG + + ++ + Y F +II
Sbjct: 1645 NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILN-KRPWHQLEPLAPYKFFDII 1703
Query: 714 GGRED--FIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS-IGVVSPYTAQVVAIRKKI 770
GR++ S N+ E+ I+++ L++ + IG++SPY Q+ +RK+
Sbjct: 1704 SGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEF 1763
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC-NTGGSIGFISKPQRVNVALTRARH 829
+ ++ +IDGFQG E++II+IS VR +T S+GF+ +R+NVALTRA+
Sbjct: 1764 ARYFGGMINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKT 1823
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCF 860
+W+LG +R+L S+ +W L+ DAK R C
Sbjct: 1824 SIWVLGHQRSLAKSK-LWRDLIEDAKDRSCL 1853
>gi|410075095|ref|XP_003955130.1| hypothetical protein KAFR_0A05600 [Kazachstania africana CBS 2517]
gi|372461712|emb|CCF55995.1| hypothetical protein KAFR_0A05600 [Kazachstania africana CBS 2517]
Length = 2250
Score = 169 bits (427), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/277 (35%), Positives = 159/277 (57%), Gaps = 14/277 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E S IPL+ G +++GD QLP V S + + +SLF R+
Sbjct: 1557 VIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVVSGAASNFKYNQSLFVRMEK- 1614
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
N + +LLN+QYRMHP+IS FP+ +FY + DG N+ + + ++ + Y F NI+
Sbjct: 1615 NTTPYLLNVQYRMHPAISYFPSSEFYGGLLKDGPNMDAIN-QRPWHNTPPLTPYKFFNIV 1673
Query: 714 GGRED--FIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS----IGVVSPYTAQVVAIR 767
GR++ S NI E+ I+++ L++ + QKV+ IG++SPY Q+ +R
Sbjct: 1674 SGRQEQNSKTMSYTNIEEIKVAIELIDYLFRNF---DQKVNFKGKIGIISPYREQMQKMR 1730
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC-NTGGSIGFISKPQRVNVALTR 826
++ + + +IDGFQG E++IIIIS VR +T S+GF+ +R+NVA TR
Sbjct: 1731 REFVVYFGASIKNFIDFNTIDGFQGQEKEIIIISCVRADDTSSSVGFLKDFRRMNVAFTR 1790
Query: 827 ARHCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
A+ +WILG +++L ++ +W L+ D+ R C A
Sbjct: 1791 AKTSMWILGHQKSLYKNK-LWRNLIDDSSRRDCMETA 1826
>gi|389646651|ref|XP_003720957.1| DNA-binding protein SMUBP-2 [Magnaporthe oryzae 70-15]
gi|351638349|gb|EHA46214.1| DNA-binding protein SMUBP-2 [Magnaporthe oryzae 70-15]
gi|440472216|gb|ELQ41092.1| DNA-binding protein SMUBP-2 [Magnaporthe oryzae Y34]
gi|440482178|gb|ELQ62693.1| DNA-binding protein SMUBP-2 [Magnaporthe oryzae P131]
Length = 2037
Score = 169 bits (427), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + +L+GD QLP V S+ + G+ +SLF R+
Sbjct: 1577 VIIDEAAQCVELSALIPLKY-GASKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQQN 1635
Query: 654 NHSK-HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ K HLL+ QYRMHP ISL+P+ +FY + DG+++ +K ++ + G Y F ++
Sbjct: 1636 HPGKVHLLDCQYRMHPEISLYPSKEFYEGLLADGSDM-AKLRQQPWHDNPLLGPYRFFDV 1694
Query: 713 IGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGS-KQKVSIGVVSPYTAQVVAIRKKI 770
G +E S N E++ I+I K + S K IG+++PY AQ+ A+R+K
Sbjct: 1695 EGIQERGSRGQSLVNTNEINVAIQIYTKFQADYASSIDMKGKIGIITPYKAQLFALRQK- 1753
Query: 771 GFEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
F+ +G ++ + D FQG E +III S VR + G IGF++ +R+NV LTRAR
Sbjct: 1754 -FQERWGEGVLEDIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRAR 1812
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCF 860
LWILG R L E W L+ D+KAR +
Sbjct: 1813 SSLWILGDSRALRQGE-FWNKLIEDSKARDRY 1843
Score = 48.1 bits (113), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 74/178 (41%), Gaps = 36/178 (20%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL----------RIK 306
LN Q A++ + G L+ GPPGTGKTKT+ ++ LL RIK
Sbjct: 1327 LNRGQAAAII------NAKENDGFTLVQGPPGTGKTKTIIAMVGALLTGKISRAPPTRIK 1380
Query: 307 C----------RTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNK 356
+ L C P+N A+ EL R+ +K D+ NT ++L G
Sbjct: 1381 PANGADEPMAQKLLVCAPSNAAVDELVLRLKAGIK-----DTNGNTHKI---NVLRLGRS 1432
Query: 357 DRLKVNPGFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKE 414
D +N ++ L+ +K+ + ++G + + + L + + V L+E
Sbjct: 1433 D--AINAAVRDVTLDELVKEKMDAALNVNGSGNSGPTDREKLHQEAGEIKVRVAALRE 1488
>gi|297850080|ref|XP_002892921.1| hypothetical protein ARALYDRAFT_312653 [Arabidopsis lyrata subsp.
lyrata]
gi|297338763|gb|EFH69180.1| hypothetical protein ARALYDRAFT_312653 [Arabidopsis lyrata subsp.
lyrata]
Length = 2129
Score = 169 bits (427), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/285 (35%), Positives = 158/285 (55%), Gaps = 20/285 (7%)
Query: 591 LNFLVIDEAAQLKESESTIPLQL--AGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
+ +VIDEAAQ E + IPLQL + +++GD QLPA V S ++ + + S+FE
Sbjct: 1522 FDAVVIDEAAQALEPATLIPLQLLKSRGTKCIMVGDPKQLPATVLSNVASKFLYECSMFE 1581
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKS---YEKQYLTGTEFG 705
RL + +L QYRMHP I FP++ FY ++L+G ++ SKS +E +L G
Sbjct: 1582 RLQRAGYPILMLTQQYRMHPEICRFPSMHFYDYKLLNGVDMSSKSAPFHESHHL-----G 1636
Query: 706 TYSFINIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQV 763
Y F +I+ G+E S N E A +++L+ K + IG+++PY Q+
Sbjct: 1637 PYVFYDIVDGQEHRSGDSSSVCNEQEAEAAVQLLRFFKKRYPSEFVAGRIGIITPYKRQL 1696
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCN-------TGGSIGFISK 816
+R + + + +++ ++DGFQG E DI+++STVR IGF++
Sbjct: 1697 AVLRSRFTGAFGAQVTADMEMNTVDGFQGREVDILVLSTVRATHSDPDGVNQSRIGFVAD 1756
Query: 817 PQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFF 861
+R+NVALTRA+ LW+LG+ RTL + WGALV DAK R+
Sbjct: 1757 VRRMNVALTRAKLSLWVLGNTRTLQRDHN-WGALVKDAKEREVII 1800
>gi|255544500|ref|XP_002513311.1| splicing endonuclease positive effector sen1, putative [Ricinus
communis]
gi|223547219|gb|EEF48714.1| splicing endonuclease positive effector sen1, putative [Ricinus
communis]
Length = 2110
Score = 169 bits (427), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 165/299 (55%), Gaps = 19/299 (6%)
Query: 575 STASSSYKLHSVEIKPL-NFLVIDEAAQLKESESTIPLQLAGINHA--VLIGDECQLPAM 631
S + SSYK + + L + ++IDEAAQ E + IPLQL N +++GD QLPA
Sbjct: 1446 SESMSSYKFGNPSERTLFDAVIIDEAAQALEPATLIPLQLLKSNGTKCIMVGDPKQLPAT 1505
Query: 632 VESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKS 691
V S ++ + + S+FERL H +L QYRMHP I FP+L FY ++L+G N+ S
Sbjct: 1506 VLSNVASKFLYECSMFERLQRAGHPVTMLTKQYRMHPDICQFPSLHFYDGKLLNGENMSS 1565
Query: 692 KSYEKQYLTGTEFGTYSFINIIGGRE----DFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
K G G Y+F ++I G+E + S N E A +++L+ K
Sbjct: 1566 KLVPFHETEG--LGPYAFYDVIDGQELRGKNSAAFSLYNEREADAAVELLRFFKKRHPSE 1623
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCN- 806
+ IG+++PY Q+ +R ++ + + ++ ++DGFQG E DI+I+S+VR
Sbjct: 1624 FEGGKIGIITPYKCQLSLLRSRLSSAFGSSVIADMEFNTVDGFQGREVDILILSSVRAGE 1683
Query: 807 --------TGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
SIGF++ +R+NVALTRA+ LWI G+ RTL ++ + W AL+ DAK R
Sbjct: 1684 AYTHVNGVNSSSIGFVADVRRMNVALTRAKLSLWIFGNARTLQANHN-WAALIKDAKQR 1741
>gi|315055809|ref|XP_003177279.1| helicase SEN1 [Arthroderma gypseum CBS 118893]
gi|311339125|gb|EFQ98327.1| helicase SEN1 [Arthroderma gypseum CBS 118893]
Length = 2179
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/303 (35%), Positives = 167/303 (55%), Gaps = 15/303 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E + IPL+ G + VL+GD QLP V SK + + +SLF R+ +
Sbjct: 1551 VVIDEAAQSIELSALIPLKY-GCSKCVLVGDPKQLPPTVLSKEASRFQYEQSLFVRMQA- 1608
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF-GTYSFI 710
NH HLL+ QYRMHP IS FP+ FY ++ DG + K+ G+E G Y F
Sbjct: 1609 NHPNDVHLLDTQYRMHPEISKFPSQAFYDGKLQDGPGMAP--LRKKPWHGSELLGPYRFF 1666
Query: 711 NIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKK 769
++ G HS NI E++ +++ ++L + IG+++PY Q+ ++ +
Sbjct: 1667 DVQGMHSSAAKGHSLVNIAELTVAMRLYERLLADYRNYDFAGKIGIITPYKGQLRELKSR 1726
Query: 770 IGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+Y + V+ + D FQG E ++II S VR + G IGF+S +R+NV LTRA+
Sbjct: 1727 FAAKYGSSIFTAVEFNTTDAFQGRECEVIIFSCVRASDRG-IGFLSDIRRMNVGLTRAKS 1785
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK-----ELVEIG 884
LW+LG+ ++L+ E W AL+ DA+ RQ + D + L K ++ + E+V+
Sbjct: 1786 SLWVLGNSQSLVRGE-FWRALIHDARDRQLYTEGDILKILQKPQISLDMEMNNVEMVDAP 1844
Query: 885 AES 887
AES
Sbjct: 1845 AES 1847
>gi|86196492|gb|EAQ71130.1| hypothetical protein MGCH7_ch7g537 [Magnaporthe oryzae 70-15]
Length = 1986
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + +L+GD QLP V S+ + G+ +SLF R+
Sbjct: 1526 VIIDEAAQCVELSALIPLKY-GASKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQQN 1584
Query: 654 NHSK-HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ K HLL+ QYRMHP ISL+P+ +FY + DG+++ +K ++ + G Y F ++
Sbjct: 1585 HPGKVHLLDCQYRMHPEISLYPSKEFYEGLLADGSDM-AKLRQQPWHDNPLLGPYRFFDV 1643
Query: 713 IGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGS-KQKVSIGVVSPYTAQVVAIRKKI 770
G +E S N E++ I+I K + S K IG+++PY AQ+ A+R+K
Sbjct: 1644 EGIQERGSRGQSLVNTNEINVAIQIYTKFQADYASSIDMKGKIGIITPYKAQLFALRQK- 1702
Query: 771 GFEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
F+ +G ++ + D FQG E +III S VR + G IGF++ +R+NV LTRAR
Sbjct: 1703 -FQERWGEGVLEDIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRAR 1761
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCF 860
LWILG R L E W L+ D+KAR +
Sbjct: 1762 SSLWILGDSRALRQGE-FWNKLIEDSKARDRY 1792
Score = 48.1 bits (113), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 74/178 (41%), Gaps = 36/178 (20%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL----------RIK 306
LN Q A++ + G L+ GPPGTGKTKT+ ++ LL RIK
Sbjct: 1276 LNRGQAAAII------NAKENDGFTLVQGPPGTGKTKTIIAMVGALLTGKISRAPPTRIK 1329
Query: 307 C----------RTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNK 356
+ L C P+N A+ EL R+ +K D+ NT ++L G
Sbjct: 1330 PANGADEPMAQKLLVCAPSNAAVDELVLRLKAGIK-----DTNGNTHKI---NVLRLGRS 1381
Query: 357 DRLKVNPGFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKE 414
D +N ++ L+ +K+ + ++G + + + L + + V L+E
Sbjct: 1382 D--AINAAVRDVTLDELVKEKMDAALNVNGSGNSGPTDREKLHQEAGEIKVRVAALRE 1437
>gi|119467162|ref|XP_001257387.1| tRNA-splicing endonuclease, putative [Neosartorya fischeri NRRL 181]
gi|119405539|gb|EAW15490.1| tRNA-splicing endonuclease, putative [Neosartorya fischeri NRRL 181]
Length = 2076
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 167/301 (55%), Gaps = 8/301 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E + IPL+ G + +L+GD QLP V SK++ + + +SLF R+ +
Sbjct: 1544 VVIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSKVASKFQYEQSLFVRMQA- 1601
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH + HLL+ QYRMHP IS++P+ FY ++ DG N+ +K + + G Y F +
Sbjct: 1602 NHPRDVHLLDTQYRMHPEISVYPSAAFYDGKLKDGPNM-AKLRARPWHQSELLGPYRFFD 1660
Query: 712 IIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G ++ HS N+ E+ +++ ++L + IG+++PY Q+ ++ +
Sbjct: 1661 VQGLHQNTTKGHSLINLAELRVAMQLYERLISDFRDYDFSGKIGIITPYKGQLRELKTQF 1720
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
Y N V + D FQG E ++II S VR + G IGF++ +R+NV LTRA+
Sbjct: 1721 AARYGNSIFNMVDFNTTDAFQGRESEVIIFSCVRASNKG-IGFLADIRRMNVGLTRAKSS 1779
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAESLTS 890
LW+LG+ ++L+ E W L+ DA+ R + + D L + + K++ + A+S
Sbjct: 1780 LWVLGNSQSLMQGE-FWNGLIKDARRRNVYTDGDILDILQRPQFTGYKDIDMMDADSPNP 1838
Query: 891 T 891
T
Sbjct: 1839 T 1839
Score = 43.9 bits (102), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 34/107 (31%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL--------------------RIKCRT------LACTPT 315
LI GPPG+GKTKT+ L+ LL R+ RT L C P+
Sbjct: 1312 LIQGPPGSGKTKTIVALVGALLSNVLGDQGVTISRPMGVANPRVPVRTTTSKKLLVCAPS 1371
Query: 316 NVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVN 362
N A+ EL R + VK + R + N ++ G D + N
Sbjct: 1372 NAAVDELVMRFKEGVKTIHGRHEKLN--------VIRLGRSDAINTN 1410
>gi|449298811|gb|EMC94826.1| hypothetical protein BAUCODRAFT_93353, partial [Baudoinia
compniacensis UAMH 10762]
Length = 1803
Score = 168 bits (426), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 150/274 (54%), Gaps = 7/274 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E S IPL+ I +++GD QLP V SK + + + +SLF R+ +
Sbjct: 1528 VIIDEAAQCVEMSSLIPLKYGCIK-CIMVGDPKQLPPTVFSKEAAKFQYEQSLFVRMQN- 1585
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH + HLL+ QYRMHP IS+FP+ FY + DG + S ++ + Y F +
Sbjct: 1586 NHPEQVHLLDTQYRMHPDISVFPSRTFYDGLLKDGTGMASLR-QRPWHASAVLAPYRFFD 1644
Query: 712 IIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G + HS NI EV + + ++L + G + IG+++PY +Q+ +R +
Sbjct: 1645 VHGQHQSAPKGHSLVNIAEVEIAMALYERLISDFKGYEYNGRIGIITPYKSQLRMLRDRF 1704
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
+ N V+ + D FQG E +III S VR + G IGF+ +R+NV LTRA+
Sbjct: 1705 SQRFGNTISDVVEFNTTDAFQGRESEIIIFSCVRASPAGGIGFLQDIRRMNVGLTRAKSS 1764
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
LW+LG+ +L S W LV DA+AR + D
Sbjct: 1765 LWVLGNSDSL-SRGQYWRKLVEDARARDAYITGD 1797
>gi|356528070|ref|XP_003532628.1| PREDICTED: probable helicase DDB_G0274399-like [Glycine max]
Length = 939
Score = 168 bits (425), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/317 (34%), Positives = 162/317 (51%), Gaps = 6/317 (1%)
Query: 552 NLPCTTSKLVLEDFCFKRASLFFSTAS-SSYKLHSVEIKPLNFLVIDEAAQLKESESTIP 610
N P ++ L A++ FST S S + S + + ++IDEAAQ E + +P
Sbjct: 557 NGPAGSNDDSLRAAILDEATIVFSTLSFSGSHVFSKLNRSFDVVIIDEAAQAVEPATLVP 616
Query: 611 LQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSI 670
L L+GD QLPA V S ++ G+G SLFERL + +L QYRMHP I
Sbjct: 617 LA-NQCKKVFLVGDPAQLPATVISDVAKNHGYGTSLFERLKQAGYPVKMLKTQYRMHPEI 675
Query: 671 SLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCR--NIV 728
FP+ +FY + + DG VKS++ + + FG + F +I G+E S N+
Sbjct: 676 RSFPSREFYEDSLEDGDEVKSRTI-RAWHDYRCFGPFCFFDIHEGKEARPPGSGSWINVE 734
Query: 729 EVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSID 788
EV V+ + QKL + K + ++SPY+ QV +K+ + V + ++D
Sbjct: 735 EVDFVLFLYQKLISLYPTLKSGNQVAIISPYSQQVKLFQKRFEETFGMSAEKVVDICTVD 794
Query: 789 GFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWG 848
G QG E+DI I S VR + IGF+ +R+NV +TRA+ + ++GS TL SE W
Sbjct: 795 GCQGREKDIAIFSCVRASKDKGIGFVEDIRRMNVGITRAKSAVLVVGSASTLRRSEQ-WN 853
Query: 849 ALVCDAKARQCFFNADE 865
LV A+ R C F +
Sbjct: 854 KLVESAEKRNCLFKVSQ 870
>gi|400600684|gb|EJP68352.1| helicase sen1 [Beauveria bassiana ARSEF 2860]
Length = 3005
Score = 168 bits (425), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/277 (36%), Positives = 152/277 (54%), Gaps = 13/277 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G +L+GD QLP V S+ + G+ +SLF R+
Sbjct: 1560 VIIDEAAQCVELSALIPLKY-GCCKCILVGDPKQLPPTVLSQSAARFGYDQSLFVRMQQ- 1617
Query: 654 NH--SKHLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYS 708
NH S HLL++QYRMHP IS+FP+ +FY Q+ DG A ++ + + + L G Y
Sbjct: 1618 NHPNSVHLLDMQYRMHPEISMFPSKEFYEGQLRDGQDMAGLRQQPWHRSAL----LGPYR 1673
Query: 709 FINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F ++ G +E S N E+ +++ + K + IG+++PY AQ+ +R
Sbjct: 1674 FFDVQGVQERGRRGQSLVNTRELDVALQMYDRFRKDYSDCNLVGKIGIITPYKAQLFELR 1733
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ Y ++ + D FQG E +III S VR + G IGF++ +R+NV LTRA
Sbjct: 1734 NRFRARYGEDITDIIEFNTTDAFQGRECEIIIFSCVRASATGGIGFMTDIRRMNVGLTRA 1793
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
+ LWILG R L+ E W L+ DA++R + D
Sbjct: 1794 KSSLWILGDSRALVQGE-FWKKLIEDAQSRDRYTQGD 1829
>gi|19115031|ref|NP_594119.1| ATP-dependent 5' to 3' DNA/RNA helicase Sen1 [Schizosaccharomyces
pombe 972h-]
gi|2842700|sp|Q92355.1|SEN1_SCHPO RecName: Full=Helicase sen1
gi|1644322|emb|CAB03612.1| ATP-dependent 5' to 3' DNA/RNA helicase Sen1 [Schizosaccharomyces
pombe]
Length = 1687
Score = 168 bits (425), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 159/271 (58%), Gaps = 6/271 (2%)
Query: 591 LNF--LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
LNF ++IDEAAQ E ++ IPL+ G +L+GD QLP V SK + + +SLF
Sbjct: 1370 LNFSTVIIDEAAQAVELDTIIPLRY-GAKKCILVGDPNQLPPTVLSKKAASLNYSQSLFV 1428
Query: 649 RLT-SLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTY 707
R+ + ++ LL+IQYRMHP IS FP+ +FY +++ DG N+ K+ ++ + +F Y
Sbjct: 1429 RIQKNFSNQMCLLSIQYRMHPDISHFPSKKFYDSRLEDGDNMAEKT-QQVWHVNPKFTQY 1487
Query: 708 SFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
++ G S N+ EV ++ ++ +L + IGV++PY +Q+ +R
Sbjct: 1488 RLFDVRGKERTSNTMSTYNLEEVEYLVNMVDELLNKFPDVNFTGRIGVITPYRSQLHELR 1547
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ +Y T+ ++++DGFQG E+DII S V+ + IGF+ +R+NVALTRA
Sbjct: 1548 RAFKVKYGKSFMSTIDIQTVDGFQGQEKDIIFFSCVKSYSKHGIGFLRDFRRLNVALTRA 1607
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQ 858
R L I+G+ TL ++ +WG+LV DA +R+
Sbjct: 1608 RSSLLIIGNMETL-KTDDLWGSLVDDALSRK 1637
Score = 45.8 bits (107), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 75/181 (41%), Gaps = 48/181 (26%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT----VSMLLLTLLRI------- 305
+NE Q A++ L +G LI GPPGTGKTKT +S LL+ L R
Sbjct: 1130 VNEPQAKAIMCAL------DNNGFTLIQGPPGTGKTKTIIGIISALLVDLSRYHITRPNQ 1183
Query: 306 -------KCRTLACTPTNVAITELASRVLK--LVKESYKRDSRSNTPICPLGDILLFGNK 356
K + L C P+N A+ E+ R+ + L++ K R ++ GN
Sbjct: 1184 QSKSTESKQQILLCAPSNAAVDEVLLRLKRGFLLENGEKYIPR----------VVRIGNP 1233
Query: 357 DRLKVNPGFEEIYLNYRI-KKLREC---------FAPLSGWRHCFSSMIDLLEDCVSQYH 406
+ +N ++ L Y+ K+L E L+ WR F I +E+ Q
Sbjct: 1234 E--TINVSVRDLSLEYQTEKQLLEVNQGAIDLGSLQELTRWRDTFYDCIQKIEELEKQID 1291
Query: 407 I 407
+
Sbjct: 1292 V 1292
>gi|317150187|ref|XP_001823850.2| tRNA-splicing endonuclease [Aspergillus oryzae RIB40]
Length = 2103
Score = 168 bits (425), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 172/318 (54%), Gaps = 19/318 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E + IPL+ G + +L+GD QLP V SK++ + + +SLF R+ S
Sbjct: 1540 VVIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSKVASKFQYEQSLFVRMQS- 1597
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYS 708
NH + HLL+IQYRMHP IS +P FY ++ DG A ++++ + + L Y
Sbjct: 1598 NHPRDVHLLDIQYRMHPEISAYPRNAFYDGKLQDGPDMARLRARPWHQSEL----LSPYR 1653
Query: 709 FINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F ++ G + HS N+ E+ +++ ++L + G IG+++PY Q+ ++
Sbjct: 1654 FFDVQGLHQSAAKGHSLVNMAELRVAMQLYERLVSDFQGFDFSGKIGIITPYKGQLRELK 1713
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+Y N + + D FQG E ++II S VR + G IGF+S +R+NV LTRA
Sbjct: 1714 THFAAKYGNAIFNMIDFNTTDAFQGRESEVIIFSCVRASNKG-IGFLSDIRRMNVGLTRA 1772
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAES 887
+ LW+LG+ ++L+ E W +L+ DA+ R + + D + L + + K + + A+
Sbjct: 1773 KSSLWVLGNSQSLVQGE-FWNSLIKDARRRSVYTDGDVLKILQRPQFTGYKNVDMLDADG 1831
Query: 888 LTSTSQG-----GKKEEF 900
ST GK E +
Sbjct: 1832 PESTKPSVDGTFGKNEPY 1849
>gi|238499341|ref|XP_002380905.1| tRNA-splicing endonuclease, putative [Aspergillus flavus NRRL3357]
gi|220692658|gb|EED49004.1| tRNA-splicing endonuclease, putative [Aspergillus flavus NRRL3357]
Length = 2122
Score = 168 bits (425), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 168/304 (55%), Gaps = 14/304 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E + IPL+ G + +L+GD QLP V SK++ + + +SLF R+ S
Sbjct: 1478 VVIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSKVASKFQYEQSLFVRMQS- 1535
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYS 708
NH + HLL+IQYRMHP IS +P FY ++ DG A ++++ + + L Y
Sbjct: 1536 NHPRDVHLLDIQYRMHPEISAYPRNAFYDGKLQDGPDMARLRARPWHQSEL----LSPYR 1591
Query: 709 FINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F ++ G + HS N+ E+ +++ ++L + G IG+++PY Q+ ++
Sbjct: 1592 FFDVQGLHQSAAKGHSLVNMAELRVAMQLYERLVSDFQGFDFSGKIGIITPYKGQLRELK 1651
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+Y N + + D FQG E ++II S VR + G IGF+S +R+NV LTRA
Sbjct: 1652 THFAAKYGNAIFNMIDFNTTDAFQGRESEVIIFSCVRASNKG-IGFLSDIRRMNVGLTRA 1710
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAES 887
+ LW+LG+ ++L+ E W +L+ DA+ R + + D + L + + K + + A+
Sbjct: 1711 KSSLWVLGNSQSLVQGE-FWNSLIKDARRRSVYTDGDVLKILQRPQFTGYKNVDMLDADG 1769
Query: 888 LTST 891
ST
Sbjct: 1770 PEST 1773
>gi|326488401|dbj|BAJ93869.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 830
Score = 168 bits (425), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 158/310 (50%), Gaps = 7/310 (2%)
Query: 554 PCTTSKLVLEDFCFKRASLFFSTAS-SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQ 612
P + L A++ FST S S + + + + ++IDEAAQ E + +PL
Sbjct: 452 PGAGERDRLRASLLDEAAIVFSTLSFSGSAIFTRMTRAFDVVIIDEAAQAIEPATLVPL- 510
Query: 613 LAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISL 672
+ G L+GD QLPA V S + + G+GRSLF+R + +L IQYRMHP IS+
Sbjct: 511 VHGCRQVFLVGDPVQLPATVISTTARKLGYGRSLFQRFQAAGFPVQMLKIQYRMHPEISV 570
Query: 673 FPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFI-YHSCRNIVEVS 731
FP+ +FY + DG + K Y + FG + F ++ G S N EV
Sbjct: 571 FPSKEFYEGILEDGEGLDKKRPWHSY---SCFGPFCFFDVDGVESHLSGSGSMVNEDEVE 627
Query: 732 AVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQ 791
+ + +L + K + V+SPY QV + + ++ + V ++DGFQ
Sbjct: 628 FITLLYHQLATRYPELKSSSQVAVISPYRGQVKLLTDHFRSTFGDQSKEVIDVNTVDGFQ 687
Query: 792 GGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
G E++++I S VRCN SIGF+S +R+NVA+TRAR + ++GS T + W LV
Sbjct: 688 GREKELVIFSCVRCNKEQSIGFVSDFRRMNVAITRARSAVLVIGSSSTF-KKDKHWTNLV 746
Query: 852 CDAKARQCFF 861
AK R +F
Sbjct: 747 ESAKERNRYF 756
>gi|167390586|ref|XP_001739415.1| splicing endonuclease positive effector sen1 [Entamoeba dispar
SAW760]
gi|165896907|gb|EDR24206.1| splicing endonuclease positive effector sen1, putative [Entamoeba
dispar SAW760]
Length = 1156
Score = 168 bits (425), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/275 (40%), Positives = 161/275 (58%), Gaps = 12/275 (4%)
Query: 574 FSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVE 633
+T+ S L+ V+ K N +++DEAAQ E + IPL+ G +LIGD QLPA V
Sbjct: 523 LNTSGSDIFLNCVKEKIEN-VIVDEAAQSVEISTLIPLRF-GAERCILIGDPQQLPATVI 580
Query: 634 SKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN--VKS 691
S + +G+ RSLFERL S +L IQYRMHP I FP+ QFY +++DG + +
Sbjct: 581 SVAAQNSGYDRSLFERLYKCGVSVDMLKIQYRMHPLIREFPSKQFYSGELIDGRDESILP 640
Query: 692 KSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKV 751
S +K FG F + GG E+ + + N VEV VI +L+ L K + K+
Sbjct: 641 CSIDKG------FGPVVFYDACGGLEERVGQTLANEVEVQIVIGLLEGLIKKYPNCKE-W 693
Query: 752 SIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGS 810
IG+V+PY Q++ I+ I K+ + V +IDGFQG E DIII S VR + S
Sbjct: 694 DIGIVTPYRQQLLLIKIAIESSPLLKEMSKLCVNTIDGFQGREMDIIIFSCVRSSQIKPS 753
Query: 811 IGFISKPQRVNVALTRARHCLWILGSERTLISSES 845
IGF+S +R+NVALTRA++ LW++G+ TL ++++
Sbjct: 754 IGFLSDIRRMNVALTRAKNALWVIGNSNTLCTNKT 788
Score = 43.5 bits (101), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 20/87 (22%)
Query: 254 SSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK------- 306
++ N SQ+ + + L + G LI GPPGTGKTKT+ +L ++ K
Sbjct: 283 TNIFNSSQIECINSAL------SKKGFSLIQGPPGTGKTKTLLGILGAIIFGKPASINKQ 336
Query: 307 -------CRTLACTPTNVAITELASRV 326
+ L C P+N A+ E+ R+
Sbjct: 337 GTVKMKHSKILVCAPSNAAVDEIVLRI 363
>gi|448105212|ref|XP_004200439.1| Piso0_003026 [Millerozyma farinosa CBS 7064]
gi|448108344|ref|XP_004201070.1| Piso0_003026 [Millerozyma farinosa CBS 7064]
gi|359381861|emb|CCE80698.1| Piso0_003026 [Millerozyma farinosa CBS 7064]
gi|359382626|emb|CCE79933.1| Piso0_003026 [Millerozyma farinosa CBS 7064]
Length = 1934
Score = 168 bits (425), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 154/272 (56%), Gaps = 5/272 (1%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E + IPL+ G +++GD QLP V S+++ + +SLF R+
Sbjct: 1534 VIIDEACQCVELSALIPLRY-GCKKCIMVGDPNQLPPTVLSQVASSFNYEQSLFVRMQKK 1592
Query: 654 NHSK-HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
S +LL+IQYRMHP IS FP+ +FY +++ DG +K + ++++ + Y F NI
Sbjct: 1593 YPSHVYLLDIQYRMHPDISRFPSAEFYNSRLHDGEGMKELN-QREWHSDFPLSPYRFFNI 1651
Query: 713 IGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G + Y S N E +++++ L K ++ IG++SPY Q+ ++
Sbjct: 1652 TGKHKQSEYTRSLYNYSEAQVALEMVKTLMKILPQNEFSGRIGIISPYKEQIRVLKDVFR 1711
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
Y + ++DGFQG E++III+S VR + G++GF+S +R+NVALTRAR L
Sbjct: 1712 KNYGQTILNEIDFNTVDGFQGQEKEIIIMSCVRASDSGNVGFLSDVRRMNVALTRARTTL 1771
Query: 832 WILGSERTLISSESIWGALVCDAKARQCFFNA 863
WILG++ +L S W L+ DAK R +A
Sbjct: 1772 WILGNKESL-SRNKTWNHLLEDAKERDAVTDA 1802
>gi|354545469|emb|CCE42197.1| hypothetical protein CPAR2_807460 [Candida parapsilosis]
Length = 1950
Score = 168 bits (425), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 155/267 (58%), Gaps = 7/267 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q ES + IPL+ G +++GD QLP V S+ + + +SLF R+
Sbjct: 1513 VIIDEACQCSESAAIIPLRY-GCRRCIMVGDPNQLPPTVLSQTAASLNYDQSLFVRMQK- 1570
Query: 654 NH--SKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH S +LLN QYRMHP IS FP+ +FY+++++DG ++ K+ + + + Y F +
Sbjct: 1571 NHPDSIYLLNTQYRMHPMISKFPSAEFYQSKLIDGPGMQEKN-TRPWHSVDPLSPYRFFD 1629
Query: 712 IIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
I+ E + + S N E + ++++QK+ IG++SPY Q+ I++
Sbjct: 1630 IVSRHEKNELTRSLYNTEEANVCLQLVQKMMTMVPQKDIAGKIGIISPYKEQIKTIKRVF 1689
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
+ + ++DGFQG E++III+S VR + GSIGF+S +R+NVALTRA
Sbjct: 1690 ERAFGRLIFNEIDFNTVDGFQGQEKEIIIMSCVRASANGSIGFLSDIRRMNVALTRACTT 1749
Query: 831 LWILGSERTLISSESIWGALVCDAKAR 857
LWILG++ +L E +W L+ DA+ R
Sbjct: 1750 LWILGNKNSLARDE-VWKRLIEDAEKR 1775
>gi|83772589|dbj|BAE62717.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1850
Score = 168 bits (425), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 168/304 (55%), Gaps = 14/304 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E + IPL+ G + +L+GD QLP V SK++ + + +SLF R+ S
Sbjct: 1417 VVIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSKVASKFQYEQSLFVRMQS- 1474
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYS 708
NH + HLL+IQYRMHP IS +P FY ++ DG A ++++ + + L Y
Sbjct: 1475 NHPRDVHLLDIQYRMHPEISAYPRNAFYDGKLQDGPDMARLRARPWHQSEL----LSPYR 1530
Query: 709 FINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F ++ G + HS N+ E+ +++ ++L + G IG+++PY Q+ ++
Sbjct: 1531 FFDVQGLHQSAAKGHSLVNMAELRVAMQLYERLVSDFQGFDFSGKIGIITPYKGQLRELK 1590
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+Y N + + D FQG E ++II S VR + G IGF+S +R+NV LTRA
Sbjct: 1591 THFAAKYGNAIFNMIDFNTTDAFQGRESEVIIFSCVRASNKG-IGFLSDIRRMNVGLTRA 1649
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAES 887
+ LW+LG+ ++L+ E W +L+ DA+ R + + D + L + + K + + A+
Sbjct: 1650 KSSLWVLGNSQSLVQGE-FWNSLIKDARRRSVYTDGDVLKILQRPQFTGYKNVDMLDADG 1708
Query: 888 LTST 891
ST
Sbjct: 1709 PEST 1712
>gi|367012806|ref|XP_003680903.1| hypothetical protein TDEL_0D01080 [Torulaspora delbrueckii]
gi|359748563|emb|CCE91692.1| hypothetical protein TDEL_0D01080 [Torulaspora delbrueckii]
Length = 2068
Score = 167 bits (424), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/284 (35%), Positives = 164/284 (57%), Gaps = 13/284 (4%)
Query: 583 LHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGF 642
L S+ +K + +++DEA Q E + IPL+ G +++GD QLP V S + G+
Sbjct: 1537 LASLGVK-FDTVIVDEACQCTELSAIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASNFGY 1594
Query: 643 GRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGT 702
+SLF R+ N S +LL++QYRMHP+IS FP+ +FY ++ DG +V+ + + +
Sbjct: 1595 NQSLFVRMEK-NSSPYLLDVQYRMHPAISKFPSAEFYNGRLKDGPDVEILNI-RPWHKNA 1652
Query: 703 EFGTYSFINIIGGREDFIYHSCR--NIVEVSAVIKILQKL---YKAWVGSKQKVSIGVVS 757
Y F +I+ G+E S N E+ I++++ L Y+ + K IGV+S
Sbjct: 1653 PLTPYRFFDIVTGKESQNAKSMSYVNTEEIRVAIELVENLVNKYERELDFSGK--IGVIS 1710
Query: 758 PYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC-NTGGSIGFISK 816
PY Q + +R++ + V +IDGFQG E++IIIIS VR ++ S+GF+
Sbjct: 1711 PYKEQAMTMRRQFRSHFGASIAQYVDFNTIDGFQGQEKEIIIISCVRADDSKTSVGFLRD 1770
Query: 817 PQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
+R+NVALTRA+ +WILG +++L+ ++ +W L+ DA+ R C
Sbjct: 1771 FRRMNVALTRAKTSMWILGHQKSLVKNK-LWRNLITDAQGRGCL 1813
Score = 43.9 bits (102), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 134/342 (39%), Gaps = 82/342 (23%)
Query: 30 TVFSW--SLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRR 87
TV W S + D+ K+ +SF SV +Y + PLL ++ GL + R
Sbjct: 1079 TVLQWDYSRRSDYPDDESPDKYSKVKDSFNSVNEY-RKVIRPLL---LLECWQGLCSTRD 1134
Query: 88 APYAQVIAFEELKPYG---------TNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLAD 138
E+ KP+ ++ Y + + I ++G DI+VLA
Sbjct: 1135 R--------EDFKPFSVIVGNRTAVSDFYEVYASASKTMIQDAG-----ITESDIIVLAY 1181
Query: 139 FKP-EKVSDLR----RVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSF 193
F E+VS +R + V T+ + + NK + ++ ++N +
Sbjct: 1182 FPGNEQVSTMRNEDFKKASHTCLAKVKTLKNTKG-NKVDVTLRIHRKHNFSKFLTLRSEI 1240
Query: 194 FFIYLTNILPNKRIWNSLHMCGNWKVITQVL---GTDSVVDERCELCSVQRKGQWDEKFG 250
F + + + +R +++L + ++ Q+L + SV + E+ V+ +
Sbjct: 1241 FAVKVMQMTTVEREYSTLEALEYYDLVEQILRAAPSQSVEVDSSEVDFVKSNYK------ 1294
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT---------------- 294
LN SQ A++ + + G LI GPPGTGKTKT
Sbjct: 1295 ------LNSSQAKAIVNTV------SKEGFSLIQGPPGTGKTKTILGVIGYFLSTRNTLP 1342
Query: 295 ----------VSMLLLTLLRIKCRTLACTPTNVAITELASRV 326
VS+ LL+ K + L C P+N A+ E+ R+
Sbjct: 1343 SNVIQAPKGSVSLSTEQLLK-KQKILICAPSNAAVDEIVLRL 1383
>gi|395331022|gb|EJF63404.1| hypothetical protein DICSQDRAFT_102653 [Dichomitus squalens LYAD-421
SS1]
Length = 1922
Score = 167 bits (424), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/276 (35%), Positives = 158/276 (57%), Gaps = 7/276 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL-TS 652
++IDEAAQ E S IP++ +++GD QLP V+S+ + G+ +SLF RL S
Sbjct: 1514 VIIDEAAQAIELSSLIPMKYR-CRTCIMVGDPQQLPPTVKSQEACRLGYDQSLFVRLQKS 1572
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ HLL+IQYRMHP IS P+ FY ++ DG + +K+ ++ + +FGTY F ++
Sbjct: 1573 QPDAVHLLSIQYRMHPDISQLPSNLFYDGRLSDGPEMAAKT-KRPWHNHPKFGTYRFFSV 1631
Query: 713 IGGREDFIY---HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKK 769
G E+ + HS N E + + +L K + + +GV+S Y Q+V +++
Sbjct: 1632 ESGTEENMPGTGHSLVNRSEAQVAVALYNRLIKEFSSTDFDFKVGVISMYRGQIVELKRA 1691
Query: 770 IGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG-GSIGFISKPQRVNVALTRAR 828
+ + TV ++DGFQG E+DIII+S VR ++GF+ +R+NVALTRA+
Sbjct: 1692 FRQRFGEEVLSTVDFNTVDGFQGQEKDIIILSCVRSGPSLQTVGFLRDVRRMNVALTRAK 1751
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
L++LG+ TL S+ IW +V +A++R AD
Sbjct: 1752 ASLFVLGNAPTLERSDDIWRKIVDNARSRTSLIKAD 1787
Score = 46.2 bits (108), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 19/83 (22%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRT------- 309
+NE Q A+L L G LI GPPGTGKT T+ L+ L + +T
Sbjct: 1276 VNEPQANAILKSL------DTEGFALIQGPPGTGKTSTICGLVQLYLSRRSKTIGRPGDK 1329
Query: 310 ------LACTPTNVAITELASRV 326
L C P+N AI E+A R+
Sbjct: 1330 EIPKKILLCAPSNAAIDEIAFRL 1352
>gi|391873505|gb|EIT82535.1| tRNA-splicing endonuclease positive effector [Aspergillus oryzae
3.042]
Length = 2123
Score = 167 bits (424), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 168/304 (55%), Gaps = 14/304 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E + IPL+ G + +L+GD QLP V SK++ + + +SLF R+ S
Sbjct: 1540 VVIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSKVASKFQYEQSLFVRMQS- 1597
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYS 708
NH + HLL+IQYRMHP IS +P FY ++ DG A ++++ + + L Y
Sbjct: 1598 NHPRDVHLLDIQYRMHPEISAYPRNAFYDGKLQDGPDMARLRARPWHQSEL----LSPYR 1653
Query: 709 FINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F ++ G + HS N+ E+ +++ ++L + G IG+++PY Q+ ++
Sbjct: 1654 FFDVQGLHQSAAKGHSLVNMAELRVAMQLYERLVSDFQGFDFSGKIGIITPYKGQLRELK 1713
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+Y N + + D FQG E ++II S VR + G IGF+S +R+NV LTRA
Sbjct: 1714 THFAAKYGNAIFNMIDFNTTDAFQGRESEVIIFSCVRASNKG-IGFLSDIRRMNVGLTRA 1772
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAES 887
+ LW+LG+ ++L+ E W +L+ DA+ R + + D + L + + K + + A+
Sbjct: 1773 KSSLWVLGNSQSLVQGE-FWNSLIKDARRRSVYTDGDVLKILQRPQFTGYKNVDMLDADG 1831
Query: 888 LTST 891
ST
Sbjct: 1832 PEST 1835
>gi|255714232|ref|XP_002553398.1| KLTH0D15862p [Lachancea thermotolerans]
gi|238934778|emb|CAR22960.1| KLTH0D15862p [Lachancea thermotolerans CBS 6340]
Length = 2090
Score = 167 bits (424), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 156/271 (57%), Gaps = 8/271 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DEA Q E S IPL+ G +++GD QLP V S + + +SLF R+
Sbjct: 1565 VIVDEACQCTELSSIIPLRY-GAKRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK- 1622
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
S HLLN+QYRMHP+IS FP+++FY+ ++ DG ++++ + + + + G Y F +I
Sbjct: 1623 QCSPHLLNVQYRMHPAISKFPSIEFYKGKLTDGPDMETIN-TRPWHSRPPLGPYKFFDIA 1681
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQ-KVSIGVVSPYTAQVVAIRKKI 770
G+++ + N E I++++ L ++ S IG++SPY Q+ +R++
Sbjct: 1682 TGKQEQNKKTMSFVNFEECKVAIELVEYLLNSYEKSFDFSGKIGIISPYREQMQTMRREF 1741
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC-NTGGSIGFISKPQRVNVALTRARH 829
+ N V +IDGFQG E++IIIIS VR +T +GF+ +R+NVALTRA+
Sbjct: 1742 RRYFGNTIAGYVDFNTIDGFQGQEKEIIIISCVRADDTKSGVGFLKDFRRMNVALTRAKT 1801
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCF 860
+WILG +L ++ +W L+ DAK R C
Sbjct: 1802 SMWILGHHSSLFKNK-LWRNLITDAKDRNCL 1831
>gi|320580258|gb|EFW94481.1| DEAD-box type RNA helicase [Ogataea parapolymorpha DL-1]
Length = 968
Score = 167 bits (424), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/268 (38%), Positives = 156/268 (58%), Gaps = 16/268 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E + IPL+ G +++GD QLP V S+ + + +SLF R+ +
Sbjct: 471 VVIDEAAQCIELSAIIPLRY-GAKRCIMVGDPNQLPPTVLSQKAASFNYEQSLFVRMQN- 528
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH +LLN+QYRMHP IS FP+ +FY +++LDG+ + K+ + + E+G Y F N
Sbjct: 529 NHDNAVYLLNVQYRMHPEISKFPSKEFYDSKLLDGSGMAEKT-ARPWHAIQEYGPYRFFN 587
Query: 712 IIGG-REDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR--- 767
I G +++ S N E ++I+ L+ + + IG++SPY Q+ IR
Sbjct: 588 IEGSHQQNEQTKSLYNYAEAKIALEIVSDLFALFPDEQWPGKIGIISPYKEQIRCIREVF 647
Query: 768 -KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGS-IGFISKPQRVNVALT 825
+K GF + F ++DGFQG E+DI++ S VR S +GF+ +R+NVALT
Sbjct: 648 VQKFGFPITKEIDFN----TVDGFQGQEKDIVLFSCVRAGEQNSGVGFLGDVRRMNVALT 703
Query: 826 RARHCLWILGSERTLISSESIWGALVCD 853
RAR LW+LGS TL+S+++ W L+ D
Sbjct: 704 RARSSLWVLGSRETLMSNKT-WRDLIDD 730
>gi|207342692|gb|EDZ70377.1| YLR430Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 955
Score = 167 bits (424), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 166/288 (57%), Gaps = 15/288 (5%)
Query: 583 LHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGF 642
L ++ IK + ++IDEA Q E S IPL+ G +++GD QLP V S + +
Sbjct: 536 LATMGIK-FDTVIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASNFKY 593
Query: 643 GRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGT 702
+SLF R+ N S +LL++QYRMHPSIS FP+ +FY+ ++ DG + + ++ +
Sbjct: 594 NQSLFVRMEK-NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILN-KRPWHQLE 651
Query: 703 EFGTYSFINIIGGRED--FIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS----IGVV 756
Y F +II GR++ S N+ E+ I+++ L++ + K+ IG++
Sbjct: 652 PLAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKF---DNKIDFTGKIGII 708
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC-NTGGSIGFIS 815
SPY Q+ +RK+ + ++ +IDGFQG E++II+IS VR +T S+GF+
Sbjct: 709 SPYREQMQKMRKEFARYFGGMINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLK 768
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
+R+NVALTRA+ +W+LG +R+L S+ +W L+ DAK R C A
Sbjct: 769 DFRRMNVALTRAKTSIWVLGHQRSLAKSK-LWRDLIEDAKDRSCLAYA 815
>gi|406605000|emb|CCH43533.1| hypothetical protein BN7_3085 [Wickerhamomyces ciferrii]
Length = 2034
Score = 167 bits (423), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 159/271 (58%), Gaps = 9/271 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEA Q E + IPL+ G +++GD QLP V S ++ E+ + +SLF R+TS
Sbjct: 1515 VVIDEACQCTELSAIIPLRY-GCQRCIMVGDPNQLPPTVLSSVAAESKYDQSLFVRMTS- 1572
Query: 654 NHSKHLL-NIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
HSK LL ++QYRMH IS FP+ +FY + DG ++ + ++++ F Y F +I
Sbjct: 1573 -HSKPLLLDVQYRMHSDISKFPSKKFYDGHLQDGPSMDVLT-KREWHKNVSFPPYRFYDI 1630
Query: 713 IGGRE--DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
G+E + S N +E+ I+++ LY + + IGV++PY Q AI++
Sbjct: 1631 AEGKESQNSKTFSYVNKMEIKIAIELIDTLYTKFGRIDYRNKIGVITPYKEQNRAIQQAF 1690
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGS-IGFISKPQRVNVALTRARH 829
+ N+ + +IDGFQG E++III+S VR ++ S +GF+ +R+NVALTR++
Sbjct: 1691 IRHFGNQIRGDITFNTIDGFQGQEKEIIIMSCVRADSNKSGVGFLKDFRRMNVALTRSKC 1750
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCF 860
LWILG +L+ ++ +W L+ DAK R F
Sbjct: 1751 SLWILGHNNSLVKND-LWSDLITDAKDRNMF 1780
Score = 42.7 bits (99), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 62/148 (41%), Gaps = 44/148 (29%)
Query: 205 KRIWNSLHMCGNWKVITQVLGTD---SVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQ 261
+R ++SLH + + Q+L S + E+ VQ+ + +N SQ
Sbjct: 1229 EREYSSLHGLAYYNLSRQILQATPDTSAIATDDEIEEVQKNYK------------VNRSQ 1276
Query: 262 VGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTV--------------SMLLLTLLRIKC 307
A+ + ++ G L+ GPPGTGKTKT+ S ++ T I
Sbjct: 1277 ANAIASSIKA------QGFFLVQGPPGTGKTKTILGIISHMLSNYRANSNVIQTPSVIPG 1330
Query: 308 RTLA---------CTPTNVAITELASRV 326
+TLA C P+N A+ EL R+
Sbjct: 1331 KTLADFKNKKVLICAPSNAAVDELVLRL 1358
>gi|242057435|ref|XP_002457863.1| hypothetical protein SORBIDRAFT_03g016948 [Sorghum bicolor]
gi|241929838|gb|EES02983.1| hypothetical protein SORBIDRAFT_03g016948 [Sorghum bicolor]
Length = 245
Score = 167 bits (423), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 131/205 (63%), Gaps = 15/205 (7%)
Query: 635 KISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSY 694
+I+ E FGRSLFERL+ L KH+LN QYRMHP IS FPN FY +I+DG NV + Y
Sbjct: 44 EIARENEFGRSLFERLSGLGFPKHMLNTQYRMHPFISQFPNQMFYDGKIIDGPNV--EDY 101
Query: 695 EKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKA-----W----- 744
YL G +GTYSFI++ G E+ +NIVE + V I+ +L + W
Sbjct: 102 NNTYLDGHMYGTYSFIHVEDGFEENSNQGSKNIVEAAVVANIVGRLVEVPSMFLWSKTTT 161
Query: 745 --VGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIIST 802
K+K S+G+VS Y AQV+A+++++ Y+ D +V+V ++D QG E+DIII+ST
Sbjct: 162 TCTKKKKKTSVGIVSAYAAQVIALQERVQ-SYKQHDFLSVEVCTVDSCQGSEKDIIILST 220
Query: 803 VRCNTGGSIGFISKPQRVNVALTRA 827
VR N GG+IGF++ +R NVALTRA
Sbjct: 221 VRHNRGGNIGFLNCDKRTNVALTRA 245
>gi|296823782|ref|XP_002850498.1| helicase SEN1 [Arthroderma otae CBS 113480]
gi|238838052|gb|EEQ27714.1| helicase SEN1 [Arthroderma otae CBS 113480]
Length = 1528
Score = 167 bits (423), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 161/291 (55%), Gaps = 10/291 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + VL+GD QLP V SK + + +SLF R+ +
Sbjct: 898 VIIDEAAQSIELSALIPLKY-GCSKCVLVGDPKQLPPTVLSKEASRFQYEQSLFVRMQA- 955
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF-GTYSFI 710
NH HLL+ QYRMHP IS FP+ FY ++ DG + K+ G+E G Y F
Sbjct: 956 NHPNDVHLLDTQYRMHPEISKFPSQAFYDGKLQDGPGMGP--LRKKPWHGSELLGPYRFF 1013
Query: 711 NIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKK 769
++ G + HS NI E++ +++ +L + IG+++PY Q+ ++ +
Sbjct: 1014 DVQGMHSNAAKGHSLVNIAELTVAMRLYDRLLADYKNYDFTGKIGIITPYKGQLRELKAR 1073
Query: 770 IGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+Y V+ + D FQG E +III S VR ++ G IGF+S +R+NV LTRA+
Sbjct: 1074 FAAKYGGSIFTAVEFNTTDAFQGRECEIIIFSCVRASSRG-IGFLSDIRRMNVGLTRAKS 1132
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKEL 880
LW+LG+ ++L+ E W AL+ DA+ R + D R L K ++ + EL
Sbjct: 1133 SLWVLGNSQSLVQGE-FWRALIHDAQGRDLYTEGDIIRILQKPQISLDMEL 1182
>gi|358393396|gb|EHK42797.1| hypothetical protein TRIATDRAFT_86336 [Trichoderma atroviride IMI
206040]
Length = 2056
Score = 167 bits (423), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 153/280 (54%), Gaps = 19/280 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G +L+GD QLP V S+ + G+ +SLF R+
Sbjct: 1588 VIIDEAAQCVELSALIPLKY-GCCKCILVGDPKQLPPTVLSQSAARFGYDQSLFVRMQQ- 1645
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANV---KSKSYEKQYLTGTEFGTYS 708
NH K HLL++QYRMHP IS FP+ +FY +Q+ DG ++ + + K L F Y
Sbjct: 1646 NHPKSVHLLDMQYRMHPEISHFPSREFYESQLHDGQDMLQLRQAPWHKDTL----FAPYR 1701
Query: 709 FINIIG----GREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVV 764
F ++ G GR+ S N E+ +++ ++ + + IG+++PY AQ+
Sbjct: 1702 FFDVEGVQERGRKG---QSLVNTRELEVALQLYERFSREYRDIDLTRKIGIITPYKAQLY 1758
Query: 765 AIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
+R + Y ++ + D FQG E +III S VR ++ G IGF++ +R+NV L
Sbjct: 1759 ELRSRFQARYGENITDIIEFNTTDAFQGRECEIIIFSCVRASSTGGIGFMTDIRRMNVGL 1818
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
TRA+ LWILG R L+ E W L+ DA+ R + D
Sbjct: 1819 TRAKSSLWILGDSRALVQGE-FWRKLIVDAQERDRYTKGD 1857
>gi|218194850|gb|EEC77277.1| hypothetical protein OsI_15909 [Oryza sativa Indica Group]
Length = 980
Score = 167 bits (422), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 156/294 (53%), Gaps = 7/294 (2%)
Query: 570 ASLFFSTAS-SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 628
A++ FST S S + S + + ++IDEAAQ E + IPL + G L+GD QL
Sbjct: 619 AAIVFSTLSFSGSSIFSRMARAFDVVIIDEAAQAVEPATLIPL-IHGCKQVFLVGDPVQL 677
Query: 629 PAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
PA V S + + G+G SLF+R + +L IQYRMHP IS+FP+ +FY + DG
Sbjct: 678 PATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEG 737
Query: 689 VKSKSYEKQYLTGTEFGTYSFINIIGGR-EDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
+ K Y + FG + F ++ G + S N EV + + ++ +
Sbjct: 738 LSKKRPWHSY---SCFGPFCFFDVDGTESQPSGSGSWVNEDEVEFITLLYHQMAMRYPEL 794
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT 807
K + V+SPY QV ++ + ++ + V ++DGFQG E++++I S VRCN
Sbjct: 795 KSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNK 854
Query: 808 GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFF 861
IGF+S +R+NVA+TRAR + ++GS TL + W LV AK R +F
Sbjct: 855 EQKIGFVSDFRRMNVAITRARSAVLVVGSASTL-KEDKHWNNLVESAKERGRYF 907
>gi|365991108|ref|XP_003672383.1| hypothetical protein NDAI_0J02480 [Naumovozyma dairenensis CBS 421]
gi|343771158|emb|CCD27140.1| hypothetical protein NDAI_0J02480 [Naumovozyma dairenensis CBS 421]
Length = 2238
Score = 167 bits (422), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 169/298 (56%), Gaps = 12/298 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DEA Q E S IPL+ G +++GD QLP V S + + +SLF R+
Sbjct: 1555 VIVDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK- 1612
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
N S +LLN+QYRMHP IS FP+ +FY+ ++ DG ++ + + + F Y F +I
Sbjct: 1613 NSSPYLLNVQYRMHPDISKFPSEEFYQGKLKDGPSMDIIN-RRPWHQMVPFAPYKFFDIS 1671
Query: 714 GGR--EDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS-IGVVSPYTAQVVAIRKKI 770
G+ ++ S N+ E+ I+++ KL+ + IGV+SPY Q+ +R++
Sbjct: 1672 TGKQQQNSKTMSYVNLEEIQVAIELVDKLFNEFDAKIDFTGKIGVISPYREQMQRMRREF 1731
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC-NTGGSIGFISKPQRVNVALTRARH 829
+ ++ +IDGFQG E++II+IS VR +T S+GF+ +R+NVA TRA+
Sbjct: 1732 TRYFGGSISKSIDFNTIDGFQGQEKEIILISCVRADDTKTSVGFLKDFRRMNVAFTRAKT 1791
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNAD----EERNLAKARLEVSKELVEI 883
+WILG +++L+ ++ +W L+ DA++R C A + L+ +RL KE+ ++
Sbjct: 1792 SMWILGHQQSLLKNK-LWKHLINDARSRDCLVVAKPGFLNGKTLSNSRLAELKEIPQM 1848
>gi|164658495|ref|XP_001730373.1| hypothetical protein MGL_2755 [Malassezia globosa CBS 7966]
gi|159104268|gb|EDP43159.1| hypothetical protein MGL_2755 [Malassezia globosa CBS 7966]
Length = 1900
Score = 167 bits (422), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 156/267 (58%), Gaps = 5/267 (1%)
Query: 592 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT 651
+ +VIDEAAQ E + IPL+ +L+GD QLP V S+ ++ + +SLF R+
Sbjct: 1389 DTVVIDEAAQAVELSTLIPLRYE-CTRCILVGDPKQLPPTVLSQEAERRQYAQSLFVRMF 1447
Query: 652 SLNHSK-HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFI 710
+ + + HLL+IQYRMHP ISLFP+ FY Q++DG + SK+ + + T FG + F
Sbjct: 1448 NASPDRVHLLSIQYRMHPDISLFPSTAFYGRQLIDGPQMASKTLQPWHNTQL-FGPFRFF 1506
Query: 711 NIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
++ E HS +N E +++ + L A + + +G VS Y AQV +R
Sbjct: 1507 HVDALEEPGRSHSIQNQSEAYTAMQVYEALC-ACAQTSLRGRVGFVSMYKAQVDLLRTLF 1565
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
+Y V S+DGFQG E+DIII+S VR N +GF+S +R+NVALTRAR
Sbjct: 1566 VSQYGRAAAMDVDFSSVDGFQGQEKDIIILSCVRSNKDRVMGFLSDHRRLNVALTRARSN 1625
Query: 831 LWILGSERTLISSESIWGALVCDAKAR 857
+ ++G+ +++ +++IW ++ +A++R
Sbjct: 1626 MIVIGNA-SMLGNDTIWRDMISEARSR 1651
Score = 54.7 bits (130), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 58/134 (43%), Gaps = 36/134 (26%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK---------- 306
LNE Q A++A +R G LI GPPGTGKTKT+ L+ + L +
Sbjct: 1152 LNEPQARAVVATMRT------PGFSLIQGPPGTGKTKTIRALVASFLSRRAGTSVGPKKA 1205
Query: 307 ---------CRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKD 357
R L C P+N AI EL SR +K+ D + P ++ G +
Sbjct: 1206 AAPARDGPSARMLLCAPSNAAIDELVSR----IKDGVDIDGKRVVP-----RLVRLGRDE 1256
Query: 358 RLKVNPGFEEIYLN 371
VNP ++ L+
Sbjct: 1257 --AVNPAVRDVTLD 1268
>gi|403214571|emb|CCK69072.1| hypothetical protein KNAG_0B06440 [Kazachstania naganishii CBS 8797]
Length = 2187
Score = 167 bits (422), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 156/268 (58%), Gaps = 8/268 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E + IPL+ G +++GD QLP V S + + +SLF R+
Sbjct: 1549 VIIDEACQCTELSAIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK- 1606
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
N +LLN+QYRMHP IS FP+ +FY ++ DG ++ + ++ + + Y F +I
Sbjct: 1607 NSQPYLLNVQYRMHPDISSFPSKEFYDGKLTDGPGMEEIN-KRPWHSCPPLSPYKFFDIA 1665
Query: 714 GGRED--FIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS-IGVVSPYTAQVVAIRKKI 770
GR++ S N EV A +K++ L+K + + IG++SPY Q++ +R++
Sbjct: 1666 MGRQEQNLKSMSFTNAEEVRAALKLIDHLFKKFDNTVNFTGKIGIISPYREQMLRMRREF 1725
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC-NTGGSIGFISKPQRVNVALTRARH 829
++ + +IDGFQG E++IIIIS VR +T S+GF+ +R+NVA TRA+
Sbjct: 1726 TRQFGGSITKYIDFNTIDGFQGQEKEIIIISCVRADDTKSSVGFLKDFRRMNVAFTRAKT 1785
Query: 830 CLWILGSERTLISSESIWGALVCDAKAR 857
+WILG +R+L+ ++ +W L+ DA+ R
Sbjct: 1786 SMWILGHQRSLVKNK-LWRNLIEDARNR 1812
>gi|54290635|dbj|BAD62206.1| regulator of nonsense transcripts 1-like [Oryza sativa Japonica
Group]
Length = 788
Score = 166 bits (421), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 156/294 (53%), Gaps = 7/294 (2%)
Query: 570 ASLFFSTAS-SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 628
A++ FST S S + S + + ++IDEAAQ E + IPL + G L+GD QL
Sbjct: 427 AAIVFSTLSFSGSSIFSRMARAFDVVIIDEAAQAVEPATLIPL-IHGCKQVFLVGDPVQL 485
Query: 629 PAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
PA V S + + G+G SLF+R + +L IQYRMHP IS+FP+ +FY + DG
Sbjct: 486 PATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEG 545
Query: 689 VKSKSYEKQYLTGTEFGTYSFINIIGGR-EDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
+ K Y + FG + F ++ G + S N EV + + ++ +
Sbjct: 546 LSKKRPWHSY---SCFGPFCFFDVDGTESQPSGSGSWVNEDEVEFITLLYHQMAMRYPEL 602
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT 807
K + V+SPY QV ++ + ++ + V ++DGFQG E++++I S VRCN
Sbjct: 603 KSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNK 662
Query: 808 GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFF 861
IGF+S +R+NVA+TRAR + ++GS TL + W LV AK R +F
Sbjct: 663 EQKIGFVSDFRRMNVAITRARSAVLVVGSASTL-KEDKHWNNLVESAKERGRYF 715
>gi|222628874|gb|EEE61006.1| hypothetical protein OsJ_14821 [Oryza sativa Japonica Group]
Length = 848
Score = 166 bits (421), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 156/294 (53%), Gaps = 7/294 (2%)
Query: 570 ASLFFSTAS-SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 628
A++ FST S S + S + + ++IDEAAQ E + IPL + G L+GD QL
Sbjct: 487 AAIVFSTLSFSGSSIFSRMARAFDVVIIDEAAQAVEPATLIPL-IHGCKQVFLVGDPVQL 545
Query: 629 PAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
PA V S + + G+G SLF+R + +L IQYRMHP IS+FP+ +FY + DG
Sbjct: 546 PATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEG 605
Query: 689 VKSKSYEKQYLTGTEFGTYSFINIIGGR-EDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
+ K Y + FG + F ++ G + S N EV + + ++ +
Sbjct: 606 LSKKRPWHSY---SCFGPFCFFDVDGTESQPSGSGSWVNEDEVEFITLLYHQMAMRYPEL 662
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT 807
K + V+SPY QV ++ + ++ + V ++DGFQG E++++I S VRCN
Sbjct: 663 KSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNK 722
Query: 808 GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFF 861
IGF+S +R+NVA+TRAR + ++GS TL + W LV AK R +F
Sbjct: 723 EQKIGFVSDFRRMNVAITRARSAVLVVGSASTL-KEDKHWNNLVESAKERGRYF 775
>gi|145247364|ref|XP_001395931.1| tRNA-splicing endonuclease [Aspergillus niger CBS 513.88]
gi|134080665|emb|CAK41330.1| unnamed protein product [Aspergillus niger]
Length = 2116
Score = 166 bits (421), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 167/308 (54%), Gaps = 14/308 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E + IPL+ G + +L+GD QLP V SK++ + + +SLF R+ +
Sbjct: 1538 VVIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSKVASKFQYEQSLFVRMQA- 1595
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANV---KSKSYEKQYLTGTEFGTYS 708
NH + HLL+IQYRMHP IS FP+ FY ++ DG N+ + + + + L Y
Sbjct: 1596 NHPRDVHLLDIQYRMHPEISAFPSSAFYDGRLQDGPNMAQLRVRPWHQSEL----LSPYR 1651
Query: 709 FINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F ++ G + HS NI E+ +++ ++L + IG+++PY Q+ ++
Sbjct: 1652 FFDVQGLHQSAAKGHSLINIAELRVAMQLYERLVTDFRAFNFDRKIGIITPYKGQLRELK 1711
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ Y N+ + + D FQG E ++II S VR + G IGF++ +R+NV LTRA
Sbjct: 1712 TQFAARYGNEIFNKIDFNTTDAFQGRESEVIIFSCVRASNKG-IGFLADIRRMNVGLTRA 1770
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAES 887
+ LW+LG+ + L+ E W L+ DA+ R + + D + L + + + + + A+S
Sbjct: 1771 KSSLWVLGNSQALVQGE-FWNGLIKDARRRNVYTDGDVLKILQRPQFTGYQNVDMLDAQS 1829
Query: 888 LTSTSQGG 895
Q G
Sbjct: 1830 EAPVVQSG 1837
>gi|350637189|gb|EHA25547.1| hypothetical protein ASPNIDRAFT_42089 [Aspergillus niger ATCC 1015]
Length = 2051
Score = 166 bits (421), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 167/308 (54%), Gaps = 14/308 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E + IPL+ G + +L+GD QLP V SK++ + + +SLF R+ +
Sbjct: 1538 VVIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSKVASKFQYEQSLFVRMQA- 1595
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANV---KSKSYEKQYLTGTEFGTYS 708
NH + HLL+IQYRMHP IS FP+ FY ++ DG N+ + + + + L Y
Sbjct: 1596 NHPRDVHLLDIQYRMHPEISAFPSSAFYDGRLQDGPNMAQLRVRPWHQSEL----LSPYR 1651
Query: 709 FINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F ++ G + HS NI E+ +++ ++L + IG+++PY Q+ ++
Sbjct: 1652 FFDVQGLHQSAAKGHSLINIAELRVAMQLYERLVTDFRAFNFDRKIGIITPYKGQLRELK 1711
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ Y N+ + + D FQG E ++II S VR + G IGF++ +R+NV LTRA
Sbjct: 1712 TQFAARYGNEIFNKIDFNTTDAFQGRESEVIIFSCVRASNKG-IGFLADIRRMNVGLTRA 1770
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAES 887
+ LW+LG+ + L+ E W L+ DA+ R + + D + L + + + + + A+S
Sbjct: 1771 KSSLWVLGNSQALVQGE-FWNGLIKDARRRNVYTDGDVLKILQRPQFTGYQNVDMLDAQS 1829
Query: 888 LTSTSQGG 895
Q G
Sbjct: 1830 EAPVVQSG 1837
>gi|242781508|ref|XP_002479814.1| tRNA-splicing endonuclease, putative [Talaromyces stipitatus ATCC
10500]
gi|218719961|gb|EED19380.1| tRNA-splicing endonuclease, putative [Talaromyces stipitatus ATCC
10500]
Length = 1391
Score = 166 bits (421), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 171/306 (55%), Gaps = 11/306 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G +L+GD QLP V SK + + +SLF R+ S
Sbjct: 829 VIIDEAAQSIELSALIPLKY-GCAKCILVGDPKQLPPTVLSKEASRFQYEQSLFVRMQS- 886
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH HLL+IQYRMHP+IS FP++ FY + DG ++ +K + + Y F +
Sbjct: 887 NHPNDVHLLDIQYRMHPAISRFPSVTFYDGLLQDGPDM-AKLRARPWHNSQLLSPYRFFD 945
Query: 712 IIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G + HS N+ E++ +++ ++L + IG+++PY Q+ ++ +
Sbjct: 946 VQGLHQSASKGHSLINVAELNVAMQLYERLLTDFKSIDFSGKIGIITPYKGQLREMKIRF 1005
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
+Y N V+ + D FQG E ++II S VR + G IGF+S +R+NV LTRA+
Sbjct: 1006 AAKYGNSIFSKVEFNTTDAFQGRESEVIIFSCVRASNKG-IGFLSDIRRMNVGLTRAKSS 1064
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK--ELVEIGA-ES 887
LW+LG+ ++LI E WG L+ DA+ R + + D R L + + + ++V+ A +S
Sbjct: 1065 LWVLGNSQSLIQGE-FWGKLITDARQRNLYTDGDVLRMLQRPQFTGYQNVDMVDADANDS 1123
Query: 888 LTSTSQ 893
TST Q
Sbjct: 1124 STSTVQ 1129
>gi|254579116|ref|XP_002495544.1| ZYRO0B13860p [Zygosaccharomyces rouxii]
gi|238938434|emb|CAR26611.1| ZYRO0B13860p [Zygosaccharomyces rouxii]
Length = 2130
Score = 166 bits (421), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 171/301 (56%), Gaps = 18/301 (5%)
Query: 569 RASLFFSTASSSYK--LHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDEC 626
++ + ST S S L S+ +K + ++IDEA Q E S IPL+ G +++GD
Sbjct: 1527 KSDIICSTLSGSAHDVLSSLGVK-FDTVIIDEACQCTELSSIIPLRYGG-RRCIMVGDPN 1584
Query: 627 QLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG 686
QLP V S + + +SLF R+ N + +LL++QYRMH SIS FP+++FY++++ DG
Sbjct: 1585 QLPPTVLSGAASSFKYNQSLFVRMEK-NITPYLLDVQYRMHSSISKFPSMEFYKSRLKDG 1643
Query: 687 ANVKSKS----YEKQYLTGTEFGTYSFINIIGGREDFIYHSCR--NIVEVSAVIKILQKL 740
V + + +E +Y Y F +I+ GRE + N+ E+ +++++ L
Sbjct: 1644 PEVDTLNQRPWHELKYSR-----PYKFFDILTGREQQSAKTMSYVNLDEIKVAMELVEYL 1698
Query: 741 YKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIII 800
+ + IGV+SPY Q +R++ + V +IDGFQG E++IIII
Sbjct: 1699 FHKFDKIDFTSKIGVISPYKEQASRMRREFLSRFGGTITREVDFNTIDGFQGQEKEIIII 1758
Query: 801 STVRC-NTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQC 859
S VR +T S+GF+ +R+NVALTRA+ +WILG +++L+ ++ +W L+ DA+ R C
Sbjct: 1759 SCVRADDTKSSVGFLRDFRRMNVALTRAKTSMWILGHQKSLVKNK-LWNRLITDAQQRGC 1817
Query: 860 F 860
Sbjct: 1818 M 1818
>gi|358385072|gb|EHK22669.1| hypothetical protein TRIVIDRAFT_191377 [Trichoderma virens Gv29-8]
Length = 2021
Score = 166 bits (421), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 99/277 (35%), Positives = 151/277 (54%), Gaps = 13/277 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G +L+GD QLP V S+ + G+ +SLF R+
Sbjct: 1571 VIIDEAAQCVELSALIPLKY-GCCKCILVGDPKQLPPTVLSQSAARFGYDQSLFVRMQQ- 1628
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANV---KSKSYEKQYLTGTEFGTYS 708
NH K HLL++QYRMHP IS FP+ +FY +Q+ DG ++ + + K L F Y
Sbjct: 1629 NHPKSIHLLDMQYRMHPEISSFPSREFYESQLQDGQDMLQLRQAPWHKDTL----FAPYR 1684
Query: 709 FINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F ++ G +E S N E+ +++ ++ + + IG+++PY AQ+ +R
Sbjct: 1685 FFDVEGVQEKGRKGQSLVNTRELEVALQMYERFSRDYHECDLTRKIGIITPYKAQLYELR 1744
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ Y ++ + D FQG E +III S VR + G IGF++ +R+NV LTRA
Sbjct: 1745 SRFQARYGENITNIIEFNTTDAFQGRECEIIIFSCVRASATGGIGFMTDIRRMNVGLTRA 1804
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
+ LWILG R L+ E W L+ DA+ R + D
Sbjct: 1805 KSSLWILGDSRALVQGE-FWRKLIVDAQDRDRYTKGD 1840
>gi|46128545|ref|XP_388826.1| hypothetical protein FG08650.1 [Gibberella zeae PH-1]
Length = 2078
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 149/274 (54%), Gaps = 7/274 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G VL+GD QLP V S+ + + G+ +SLF R+
Sbjct: 1591 VIIDEAAQCVELSALIPLKY-GCYRCVLVGDPKQLPPTVLSQSAAKFGYDQSLFVRMQQ- 1648
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH HLL++QYRMHP IS+FP+ +FY Q+ DG N+ + + + G Y F +
Sbjct: 1649 NHPDWVHLLDMQYRMHPEISMFPSREFYEGQLADGQNMHELRQQPWHQSAL-LGPYRFFD 1707
Query: 712 IIGGR-EDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G + S N E+ +++ + + IG+++PY AQ+ +R +
Sbjct: 1708 VQGVQARGHKGQSLVNTRELDVAMQMYDRFSNEYGDCDLTGKIGIITPYKAQLFELRNRF 1767
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
Y ++ + D FQG E +III S VR ++ G IGF++ +R+NV LTRA+
Sbjct: 1768 RSRYGEGITDIIEFNTTDAFQGRECEIIIFSCVRASSTGGIGFMTDIRRMNVGLTRAKSS 1827
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
LWILG R L+ E W L+ DA++R + D
Sbjct: 1828 LWILGDSRALVQGE-FWKKLIEDAQSRDRYTKGD 1860
Score = 45.4 bits (106), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 72/187 (38%), Gaps = 45/187 (24%)
Query: 175 YKVKARNNMQVHDKTKK-SFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSVVDER 233
Y+V +RNN T S F + +TN+ +R + +L + ++ ++L R
Sbjct: 1262 YRVASRNNPMTQVLTPNVSVFGVKITNMTTIEREYAALESLQYYDLMDEILNAKPSPILR 1321
Query: 234 CELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTK 293
+ V Q + +LN Q A+L G LI GPPGTGKTK
Sbjct: 1322 YDEAKVNNCMQ---------NYSLNHGQAMAVLGA------HDNDGFTLIQGPPGTGKTK 1366
Query: 294 TVSMLLLTLL-----------------------------RIKCRTLACTPTNVAITELAS 324
T+ ++ TLL + + L C P+N A+ EL
Sbjct: 1367 TIVAMVGTLLSEQLSQASNQGFPVGVPLRPTGLQASNSQKRSKKLLVCAPSNAAVDELVL 1426
Query: 325 RVLKLVK 331
R+ VK
Sbjct: 1427 RLKAGVK 1433
>gi|254568798|ref|XP_002491509.1| Presumed helicase required for RNA polymerase II transcription
termination and processing of RNAs [Komagataella pastoris
GS115]
gi|238031306|emb|CAY69229.1| Presumed helicase required for RNA polymerase II transcription
termination and processing of RNAs [Komagataella pastoris
GS115]
Length = 2146
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 153/270 (56%), Gaps = 9/270 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEA Q E + IPL+ G +++GD QLP V S+ + E + +SLF R+ ++
Sbjct: 1523 VVIDEACQCIELSAIIPLRY-GCKRCIMVGDPNQLPPTVLSQAAAEYKYEQSLFVRMMNV 1581
Query: 654 N-HSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ S +LLN+QYRMHP IS+FP+ +FY +++DG ++K+ + + Y FI++
Sbjct: 1582 HPKSVYLLNVQYRMHPQISVFPSKEFYNGKLIDGEGTETKNTRSWH---KKIPPYCFIDV 1638
Query: 713 IGGREDFIYH-SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G + S N E AV+ ++ L IGV+SPY QVV +R I
Sbjct: 1639 TGKESTNTSNKSLFNRAEAQAVVSLIDALLGLDRDFNFASKIGVISPYKQQVVLLRDMIL 1698
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
++ G + V ++DGFQG E+D+I+ S VR + +GF++ +R+NVALTRA+ L
Sbjct: 1699 RKFGRNIG--IDVNTVDGFQGQEKDVILFSCVRADETKGVGFLADVRRLNVALTRAKSTL 1756
Query: 832 WILGSERTLISSESIWGALVCDAKARQCFF 861
I+G L S S+W LV D+K R FF
Sbjct: 1757 LIVGHASNL-SGHSLWRHLVQDSKDRNVFF 1785
>gi|328351981|emb|CCA38380.1| hypothetical protein PP7435_Chr2-0694 [Komagataella pastoris CBS
7435]
Length = 2154
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 153/270 (56%), Gaps = 9/270 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEA Q E + IPL+ G +++GD QLP V S+ + E + +SLF R+ ++
Sbjct: 1523 VVIDEACQCIELSAIIPLRY-GCKRCIMVGDPNQLPPTVLSQAAAEYKYEQSLFVRMMNV 1581
Query: 654 N-HSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ S +LLN+QYRMHP IS+FP+ +FY +++DG ++K+ + + Y FI++
Sbjct: 1582 HPKSVYLLNVQYRMHPQISVFPSKEFYNGKLIDGEGTETKNTRSWH---KKIPPYCFIDV 1638
Query: 713 IGGREDFIYH-SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G + S N E AV+ ++ L IGV+SPY QVV +R I
Sbjct: 1639 TGKESTNTSNKSLFNRAEAQAVVSLIDALLGLDRDFNFASKIGVISPYKQQVVLLRDMIL 1698
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
++ G + V ++DGFQG E+D+I+ S VR + +GF++ +R+NVALTRA+ L
Sbjct: 1699 RKFGRNIG--IDVNTVDGFQGQEKDVILFSCVRADETKGVGFLADVRRLNVALTRAKSTL 1756
Query: 832 WILGSERTLISSESIWGALVCDAKARQCFF 861
I+G L S S+W LV D+K R FF
Sbjct: 1757 LIVGHASNL-SGHSLWRHLVQDSKDRNVFF 1785
>gi|27764657|gb|AAO23082.1| putative component of a tRNA splicing complex [Oryza sativa
Japonica Group]
Length = 788
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 156/294 (53%), Gaps = 7/294 (2%)
Query: 570 ASLFFSTAS-SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 628
A++ FST S S + S + + ++IDEAAQ E + IPL + G L+GD QL
Sbjct: 427 AAIVFSTLSFSGSSIFSRMARAFDVVIIDEAAQAVEPATLIPL-IHGCKQVFLVGDPVQL 485
Query: 629 PAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
PA V S + + G+G SLF+R + +L IQYRMHP IS+FP+ +FY + DG
Sbjct: 486 PATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEG 545
Query: 689 VKSKSYEKQYLTGTEFGTYSFINIIGGR-EDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
+ K Y + FG + F ++ G + S N EV + + ++ +
Sbjct: 546 LSKKRPWHSY---SCFGPFCFFDVDGTESQPSGSGSWVNEDEVEFITLLYHQMAMRYPEL 602
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT 807
K + V+SPY QV ++ + ++ + V ++DGFQG E++++I S VRCN
Sbjct: 603 KSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGCEKEVVIFSCVRCNK 662
Query: 808 GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFF 861
IGF+S +R+NVA+TRAR + ++GS TL + W LV AK R +F
Sbjct: 663 EQKIGFVSDFRRMNVAITRARSAVLVVGSASTL-KEDKHWNNLVESAKERGRYF 715
>gi|340519570|gb|EGR49808.1| hypothetical protein TRIREDRAFT_59544 [Trichoderma reesei QM6a]
Length = 2034
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 153/280 (54%), Gaps = 19/280 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G +L+GD QLP V S+ + G+ +SLF R+
Sbjct: 1587 VIIDEAAQCVELSALIPLKY-GCCKCILVGDPKQLPPTVLSQSAARFGYDQSLFVRMQQ- 1644
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANV---KSKSYEKQYLTGTEFGTYS 708
NH K HLL++QYRMHP IS FP+ +FY +Q+ DG ++ + + K L F Y
Sbjct: 1645 NHPKSVHLLDMQYRMHPEISSFPSREFYESQLKDGQDMLRLRQAPWHKDAL----FAPYR 1700
Query: 709 FINIIG----GREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVV 764
F ++ G GR+ S N E+ +++ ++ + + IG+++PY AQ+
Sbjct: 1701 FFDVEGVQERGRKG---QSLVNTKELDVALQMYERFSRDYRDCDLTRKIGIITPYKAQLH 1757
Query: 765 AIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
+R + Y ++ + D FQG E +III S VR ++ G IGF++ +R+NV L
Sbjct: 1758 ELRSRFQARYGENITNIIEFNTTDAFQGRECEIIIFSCVRASSTGGIGFMTDIRRMNVGL 1817
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
TRA+ LWILG R L+ E W L+ DA+ R + D
Sbjct: 1818 TRAKSSLWILGDSRALVQGE-FWRKLIEDAQGRDRYTKGD 1856
>gi|2340994|gb|AAB67523.1| Sen1p [Saccharomyces cerevisiae]
Length = 757
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/285 (35%), Positives = 165/285 (57%), Gaps = 15/285 (5%)
Query: 583 LHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGF 642
L ++ IK + ++IDEA Q E S IPL+ G +++GD QLP V S + +
Sbjct: 103 LATMGIK-FDTVIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASNFKY 160
Query: 643 GRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGT 702
+SLF R+ N S +LL++QYRMHPSIS FP+ +FY+ ++ DG + + ++ +
Sbjct: 161 NQSLFVRMEK-NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILN-KRPWHQLE 218
Query: 703 EFGTYSFINIIGGRED--FIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS----IGVV 756
Y F +II GR++ S N+ E+ I+++ L++ + K+ IG++
Sbjct: 219 PLAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKF---DNKIDFTGKIGII 275
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC-NTGGSIGFIS 815
SPY Q+ +RK+ + ++ +IDGFQG E++II+IS VR +T S+GF+
Sbjct: 276 SPYREQMQKMRKEFARYFGGMINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLK 335
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
+R+NVALTRA+ +W+LG +R+L S+ +W L+ DAK R C
Sbjct: 336 DFRRMNVALTRAKTSIWVLGHQRSLAKSK-LWRDLIEDAKDRSCL 379
>gi|164429654|ref|XP_964658.2| hypothetical protein NCU02036 [Neurospora crassa OR74A]
gi|157073565|gb|EAA35422.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 682
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 163/308 (52%), Gaps = 11/308 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + +L+GD QLP V S+ + G+ +SLF R+
Sbjct: 256 VIIDEAAQCVELSALIPLKY-GCSKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQK- 313
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH K HLL+ QYRMHP IS FP FY + DG ++ +KS + + T G Y F +
Sbjct: 314 NHEKDVHLLDTQYRMHPEISSFPRAAFYEGLLQDGDDM-AKSRLQPWHRSTLLGPYRFFD 372
Query: 712 IIGGREDFIYH-SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G +E + S N E+ +++ ++ + K IG+++PY AQ+ +R +
Sbjct: 373 VRGSQERGPKNQSLVNEEELKVAMQLYRRFKADYGNVDLKGKIGIITPYKAQLYRLRSQF 432
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
+ + ++ + D FQG E +III S VR + G IGF++ +R+NV LTRAR
Sbjct: 433 AQRFGDAITDEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSS 492
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAESLTS 890
LWILG R L+ E W L+ D+K R + N+ + +L E+L
Sbjct: 493 LWILGDSRALMQGE-FWAKLIEDSKRRDRYTTG----NIMGMLSQAGPQLSAAAFEALAI 547
Query: 891 TSQGGKKE 898
TS G +E
Sbjct: 548 TSTGNTRE 555
>gi|448521196|ref|XP_003868449.1| Sen1 helicase [Candida orthopsilosis Co 90-125]
gi|380352789|emb|CCG25545.1| Sen1 helicase [Candida orthopsilosis]
Length = 1946
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 155/272 (56%), Gaps = 5/272 (1%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT-S 652
++IDEA Q ES + IPL+ G +++GD QLP V S+ + + +SLF R+ +
Sbjct: 1511 VIIDEACQCLESAAIIPLRY-GCKKCIMVGDPNQLPPTVLSQSAASLNYDQSLFVRMQQN 1569
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
S +LLN QYRMHP IS FP+ +FY+++++DG +K K+ +L Y F +I
Sbjct: 1570 YPDSVYLLNTQYRMHPMISKFPSAEFYQSKLIDGPGMKEKNTRPWHLID-PLSPYRFFDI 1628
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
+ E + + S N E + ++++QK+ S IG++SPY Q+ I+
Sbjct: 1629 VSRHEKNELTRSLFNKEEANVCLQLVQKMMTMVPQSDIAGKIGIISPYKEQIRTIKSVFE 1688
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
Y + ++DGFQG E++III+S VR + G++GF+S +R+NVALTRA L
Sbjct: 1689 RAYGRLIFNEIDFNTVDGFQGQEKEIIIMSCVRASANGNVGFLSDVRRMNVALTRACTTL 1748
Query: 832 WILGSERTLISSESIWGALVCDAKARQCFFNA 863
WILG+ +T + +++W L+ DA+ R A
Sbjct: 1749 WILGN-KTSLERDAVWKRLLEDAEKRNTVTKA 1779
>gi|281211278|gb|EFA85443.1| Regulator of nonsense transcripts-like protein [Polysphondylium
pallidum PN500]
Length = 1412
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 161/286 (56%), Gaps = 18/286 (6%)
Query: 574 FSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVE 633
S A S +HS +P + +++DE+ Q ES + IPL + +LIGD QLP V
Sbjct: 633 LSGAGSQLIIHS-GFRP-SVVIVDESTQSCESSTLIPLLRNPNSKIILIGDPKQLPPTVF 690
Query: 634 SKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKS 693
S IS + SLFERL H+L+ QYRMHP IS FP+LQFY +++ DG NV
Sbjct: 691 SGISSRFNYDVSLFERLAKY-FPVHMLDTQYRMHPKISKFPSLQFYNSKLKDGENV--AK 747
Query: 694 YEKQYLTGTEFGTYSFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS 752
Y + T ++G +F +I +E I +S N +E+ V +L+KL + K +S
Sbjct: 748 YHNSFYTDPKYGPINFYHIPDSQELKTIGNSIMNDLEIRLVFTLLKKLVQDHPEVKS-MS 806
Query: 753 IGVVSPYTAQVVAIRKKIGFEYEN--KDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGS 810
+G+++PY Q KK+ + +N + V V ++DGFQG E+DIII S VR
Sbjct: 807 VGIITPYKLQ-----KKVLQDAKNHFNEKMDVVVNTVDGFQGAEKDIIIFSCVRSE---K 858
Query: 811 IGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKA 856
IGF+ +R+NV +TRAR L+I+GS + L+ + WGA + D K+
Sbjct: 859 IGFLKDTRRINVGITRARRALYIVGSAK-LLEQDPNWGAYLRDIKS 903
Score = 55.1 bits (131), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 280 VELIWGPPGTGKTKTVSMLLL---TLLRIKCRTLACTPTNVAITELASRVLK 328
+ LI GPPGTGKTKT+ LL T+L+ + L C P+NVA+ E+ RVLK
Sbjct: 526 ISLIQGPPGTGKTKTIISLLAIFNTILKPTEQILVCAPSNVAVDEVGLRVLK 577
>gi|295662663|ref|XP_002791885.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279537|gb|EEH35103.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 2130
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/310 (35%), Positives = 168/310 (54%), Gaps = 18/310 (5%)
Query: 561 VLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAV 620
VLED A+L + S S++I+ +VIDEAAQ E + IPL+ G + +
Sbjct: 1509 VLEDAHVLCATL---SGSGHEMFQSLDIE-FETVVIDEAAQSIELSALIPLKY-GCSKCI 1563
Query: 621 LIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSK--HLLNIQYRMHPSISLFPNLQF 678
L+GD QLP V SK++ + +SLF R+ + NH + HLL+ QYRMHP IS FP+ F
Sbjct: 1564 LVGDPKQLPPTVLSKVASRFQYEQSLFVRMQA-NHPQDVHLLDTQYRMHPEISRFPSAAF 1622
Query: 679 YRNQILDGANV---KSKSYEKQYLTGTEFGTYSFINIIGGREDFIY-HSCRNIVEVSAVI 734
Y ++ DG ++ +S+ + K L FG Y F ++ G HS N+ EV +
Sbjct: 1623 YDGRLQDGPDMDKLRSRIWHKSEL----FGPYRFFDVQGLHSSAPKGHSLVNLAEVRVAM 1678
Query: 735 KILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGE 794
K+ ++L + IG+++PY Q+ ++ + +Y N ++ + D FQG E
Sbjct: 1679 KLYERLTTDFKIYDFTNKIGIITPYKGQLREMKNQFANKYGNSIFTMIEFNTTDAFQGRE 1738
Query: 795 EDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDA 854
+III S VR + G IGF++ +R+NV LTRA+ LW+LGS ++L+ E W L+ DA
Sbjct: 1739 CEIIIFSCVRASDRG-IGFLADIRRMNVGLTRAKSSLWVLGSSKSLVQGE-FWRGLINDA 1796
Query: 855 KARQCFFNAD 864
R D
Sbjct: 1797 HTRNLVTQGD 1806
>gi|408388581|gb|EKJ68262.1| hypothetical protein FPSE_11565 [Fusarium pseudograminearum CS3096]
Length = 2079
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 149/274 (54%), Gaps = 7/274 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G VL+GD QLP V S+ + + G+ +SLF R+
Sbjct: 1591 VIIDEAAQCVELSALIPLKY-GCYRCVLVGDPKQLPPTVLSQSAAKFGYDQSLFVRMQQ- 1648
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH HLL++QYRMHP IS+FP+ +FY Q+ DG N+ + + + G Y F +
Sbjct: 1649 NHPDWVHLLDMQYRMHPEISMFPSREFYEGQLADGQNMHELRQQPWHQSAL-LGPYRFFD 1707
Query: 712 IIGGR-EDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G + S N E+ +++ + + IG+++PY AQ+ +R +
Sbjct: 1708 VQGVQARGHKGQSLVNTRELDVAMQMYDRFSNEYGECDLTGKIGIITPYKAQLFELRNRF 1767
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
Y ++ + D FQG E +III S VR ++ G IGF++ +R+NV LTRA+
Sbjct: 1768 RSRYGEGITNIIEFNTTDAFQGRECEIIIFSCVRASSTGGIGFMTDIRRMNVGLTRAKSS 1827
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
LWILG R L+ E W L+ DA++R + D
Sbjct: 1828 LWILGDSRALVQGE-FWKKLIEDAQSRDRYTKGD 1860
Score = 45.8 bits (107), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 72/187 (38%), Gaps = 45/187 (24%)
Query: 175 YKVKARNNMQVHDKTKK-SFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSVVDER 233
Y+V +RNN T S F + +TN+ +R + +L + ++ ++L R
Sbjct: 1262 YRVASRNNSMTQVLTPNVSVFGVKITNMTTIEREYAALESLQYYDLMDEILNAKPSPILR 1321
Query: 234 CELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTK 293
+ V Q + +LN Q A+L G LI GPPGTGKTK
Sbjct: 1322 YDEAKVNNCMQ---------NYSLNHGQAMAVLGA------HDNDGFTLIQGPPGTGKTK 1366
Query: 294 TVSMLLLTLL-----------------------------RIKCRTLACTPTNVAITELAS 324
T+ ++ TLL + + L C P+N A+ EL
Sbjct: 1367 TIVAMVGTLLSEQLSQASNQGFPVGVPLRPTGLQAPNNQKRSKKLLVCAPSNAAVDELVL 1426
Query: 325 RVLKLVK 331
R+ VK
Sbjct: 1427 RLKAGVK 1433
>gi|212526670|ref|XP_002143492.1| tRNA-splicing endonuclease, putative [Talaromyces marneffei ATCC
18224]
gi|210072890|gb|EEA26977.1| tRNA-splicing endonuclease, putative [Talaromyces marneffei ATCC
18224]
Length = 2105
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 153/274 (55%), Gaps = 8/274 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G +L+GD QLP V SK + + +SLF R+ S
Sbjct: 1533 VIIDEAAQSIELSALIPLKY-GCAKCILVGDPKQLPPTVLSKEASRFQYEQSLFVRMQS- 1590
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH HLL+IQYRMHP+IS FP++ FY + DG ++ +K + + Y F +
Sbjct: 1591 NHPNDVHLLDIQYRMHPAISQFPSVTFYDGLLQDGPDM-AKLRARPWHNSQLLSPYRFFD 1649
Query: 712 IIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G + HS NI E++ +++ ++L + IG+++PY Q+ +R +
Sbjct: 1650 VQGLHQSASKGHSLINIAELNVAMQLYERLLADFKSYDFSGKIGIITPYKGQLREMRTRF 1709
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
Y N V+ + D FQG E ++II S VR + G IGF+S +R+NV LTRA+
Sbjct: 1710 AARYGNSIFSKVEFNTTDAFQGRESEVIIFSCVRASNKG-IGFLSDIRRMNVGLTRAKSS 1768
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
LW+LG+ ++LI E W L+ D++ R + + D
Sbjct: 1769 LWVLGNSQSLIQGE-FWKKLITDSRQRNVYTDGD 1801
>gi|145494398|ref|XP_001433193.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400310|emb|CAK65796.1| unnamed protein product [Paramecium tetraurelia]
Length = 1493
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 176/311 (56%), Gaps = 19/311 (6%)
Query: 565 FCFK---RASLFFSTASSS--YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHA 619
FC K A + ST SSS KL S + + L++DEAAQ E + IPL+L GI
Sbjct: 1023 FCEKLLNDAEIICSTLSSSGSDKL-SKYLDQIELLIVDEAAQCTEPSNIIPLRL-GIQKM 1080
Query: 620 VLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFY 679
+LIGD QLPA S +S++ + RSLFER+ N + L+IQYRMH I +FP+ FY
Sbjct: 1081 ILIGDPKQLPATTFSPVSNQTLYNRSLFERILDNNFQPYFLDIQYRMHSEIRMFPSEYFY 1140
Query: 680 RNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQK 739
+N++ D + ++ + F++I+ G+E S N E S ++ ++
Sbjct: 1141 QNKLKDHESTNNRDLPTNFFKNRVL----FLDILDGQEQKDGTSNINEQEASIIVNSIKC 1196
Query: 740 LYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENK---DGFTVKVKSIDGFQGGEED 796
+ + + +IGV+ Y +QV I+ + +Y ++ D T+ + ++D FQG E+D
Sbjct: 1197 IKEEFPTQ----TIGVICAYKSQVRYIKTLLKQKYSDESLFDHSTISINTVDSFQGQEKD 1252
Query: 797 IIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKA 856
II+ S VR + G IGF++ +R+NVALTRA++ L+ILG+ TL S+ +W +++ + +
Sbjct: 1253 IILFSCVRSSQTGGIGFLNDGRRMNVALTRAKNALFILGNAITLSKSD-LWKSMLKNIQK 1311
Query: 857 RQCFFNADEER 867
R + N + ++
Sbjct: 1312 RGLYRNLESQQ 1322
Score = 46.2 bits (108), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 258 NESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLL--------LTLLRIKCRT 309
NE+Q ++ + + G+ L+ GPPGTGKT T+ LL LT + +
Sbjct: 821 NETQANSIKEIILK-----EKGICLLQGPPGTGKTHTLIGLLSGVYEYMKLTNKFPRKKI 875
Query: 310 LACTPTNVAITELASRVLK 328
L C P+N AI E+ R+L+
Sbjct: 876 LICAPSNAAIDEIILRILQ 894
>gi|429853279|gb|ELA28360.1| helicase sen1 [Colletotrichum gloeosporioides Nara gc5]
Length = 2051
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 161/282 (57%), Gaps = 22/282 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT-S 652
++IDEAAQ E + IPL+ G +L+GD QLP V S+ + G+ +SLF R+ +
Sbjct: 1577 VIIDEAAQCVELSALIPLKY-GATKCILVGDPKQLPPTVLSQSAARFGYDQSLFVRMQRN 1635
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYSF 709
+ H+L+ QYRMHP IS FP+L+FY +++DG A+++ + + L G Y F
Sbjct: 1636 FPNYIHMLDRQYRMHPEISRFPSLEFYEGKLVDGDDMADLRRQPWHASAL----LGPYRF 1691
Query: 710 INIIGGREDFIYHSCRNIVEVSAVIKILQKLY---KAWVGSKQKV--SIGVVSPYTAQVV 764
++ G +E + R++V A +++ +LY +A G + + IG+++PY AQ+
Sbjct: 1692 FDVEGSQEKG--NKGRSLVN-HAELRVAMQLYERFRADFGRQTDIRGKIGIITPYKAQLQ 1748
Query: 765 AIRKKIGFEYENKDGFT--VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNV 822
+R + G +Y DG T ++ + D FQG E +III S VR + G IGF+ +R+NV
Sbjct: 1749 ELRYQFGRQY--GDGITDDIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMQDIRRMNV 1806
Query: 823 ALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
LTRA+ LWILG R L+ E W L+ +A+ R + D
Sbjct: 1807 GLTRAKSSLWILGDSRALVQGE-FWNKLIENARQRALYTKGD 1847
>gi|390603202|gb|EIN12594.1| hypothetical protein PUNSTDRAFT_118369 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1879
Score = 166 bits (419), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/277 (35%), Positives = 154/277 (55%), Gaps = 5/277 (1%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
++ ++IDEAAQ E + IPL+ V++GD QLP V S+ + + + +SLF RL
Sbjct: 1472 IDLVIIDEAAQAIELSTLIPLKYP-CKRCVMVGDPQQLPPTVLSQEACKYQYNQSLFVRL 1530
Query: 651 -TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSF 709
+ HLL+IQYRMHP IS P+ FY ++ DG ++ K+ ++ + +FG Y F
Sbjct: 1531 LKDQPEAIHLLSIQYRMHPEISRLPSQIFYDGRLQDGPDMAEKT-KQPWHRHAKFGPYRF 1589
Query: 710 INIIGGREDF-IYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
N+ G+E+ S N E + + +L + + +GVVS Y AQ+ +R+
Sbjct: 1590 FNVNRGQEEPGRAKSLMNKAECQVAVALYTRLRREFSSIDLDFRVGVVSMYRAQIFEMRR 1649
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG-GSIGFISKPQRVNVALTRA 827
+ + V ++DGFQG E+D+II+S VR S+GF+S +R+NVALTRA
Sbjct: 1650 AFEQRFGAEIVGKVDFNTVDGFQGQEKDVIILSCVRAGANLHSVGFLSDTRRMNVALTRA 1709
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
R L++LG TL + + W +V DA++R C + D
Sbjct: 1710 RSSLFVLGHSPTLENGDKTWSKIVNDARSRSCHIDVD 1746
Score = 47.4 bits (111), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 46/101 (45%), Gaps = 27/101 (26%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL--RIKCRT----- 309
LNE Q A+L+ LR LI GPPGTGKT T+ L+ L R K T
Sbjct: 1228 LNEPQAKAVLSSLRA------ESFSLIQGPPGTGKTSTICGLVQAYLASRRKPATNIQAG 1281
Query: 310 --------------LACTPTNVAITELASRVLKLVKESYKR 336
L C P+N AI E+ASR+ + + S KR
Sbjct: 1282 RATAASDTAPVKKVLVCAPSNAAIDEVASRLKEGLSGSGKR 1322
>gi|294655237|ref|XP_002770105.1| DEHA2B08822p [Debaryomyces hansenii CBS767]
gi|199429794|emb|CAR65475.1| DEHA2B08822p [Debaryomyces hansenii CBS767]
Length = 1968
Score = 166 bits (419), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/275 (34%), Positives = 159/275 (57%), Gaps = 11/275 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E + IPL+ G +++GD QLP V S+ + + +SLF R+ +
Sbjct: 1557 VIIDEACQSVELSAIIPLRY-GCKKCIMVGDPNQLPPTVLSQAAASFNYEQSLFVRMQKM 1615
Query: 654 -NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYSF 709
S +LL++QYRMHP+IS FP+ +FY +++ DG A S+ + K Y Y F
Sbjct: 1616 YPESVYLLDVQYRMHPAISKFPSSEFYFSRLHDGEGMAAKNSRPWHKDY----PLSPYMF 1671
Query: 710 INIIGG-REDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
+I+G +++ + S N E ++++ KL + ++ IG++SPY Q+ ++
Sbjct: 1672 FDIVGKHQQNELSRSLFNYAEAQVALELVDKLIQILPQTEFSGRIGIISPYKEQIRTLKD 1731
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
+Y + + ++DGFQG E++III+S VR + G++GF+S +R+NVALTRAR
Sbjct: 1732 VFKRKYGHSILSEIDFNTVDGFQGQEKEIIIMSCVRASESGNVGFLSDVRRMNVALTRAR 1791
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
LWILG++++L S ++W L+ DA R A
Sbjct: 1792 TSLWILGNKKSL-SRNTVWKRLLDDAAERNAVSEA 1825
>gi|145349529|ref|XP_001419184.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579415|gb|ABO97477.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 479
Score = 166 bits (419), Expect = 2e-37, Method: Composition-based stats.
Identities = 103/307 (33%), Positives = 157/307 (51%), Gaps = 30/307 (9%)
Query: 595 VIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLN 654
+IDEA Q E + IPL G VLIGD+ QLP + S+ ++ AG G SLFER
Sbjct: 104 LIDEATQATEPATVIPLT-KGCKQVVLIGDQNQLPPTIISREAEAAGLGESLFERFIRAG 162
Query: 655 HSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIG 714
++L +QYRMHP+I+LFP+ FY+ ++L G + + +F+N+
Sbjct: 163 IRTYMLKVQYRMHPAIALFPSKTFYKGELLSGTPPSQRRAPVGFDWPVPAVPMAFVNVEE 222
Query: 715 GREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKV--SIGVVSPYTAQVVAIRKKIGF 772
G E S N E+ V+ I++KL G + + IGVV+PY+AQ AI+K +
Sbjct: 223 GAERSDGSSQTNPAEIQRVVNIVKKL----AGQHEVLPGDIGVVTPYSAQARAIKKILRG 278
Query: 773 EYENKDGF----------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNV 822
+ F V+V ++DGFQG E+++I+ S R N G++GF++ +RVNV
Sbjct: 279 NAPERTRFDAPADPTSMKAVEVATVDGFQGREKEVIVFSCTRANMNGNVGFLADTRRVNV 338
Query: 823 ALTRARHCLWILGSERTLISSESIW---------GALVCDAKARQCFFNADEERNLAKAR 873
LTRA+ L I+G +TL E +W L+C A ++D LA
Sbjct: 339 MLTRAKRGLIIVGHMKTLQQDEIVWKGWLKWARESGLICGLSAT----DSDAANRLASIG 394
Query: 874 LEVSKEL 880
+ + E+
Sbjct: 395 MSAANEI 401
>gi|367021720|ref|XP_003660145.1| hypothetical protein MYCTH_2298080 [Myceliophthora thermophila ATCC
42464]
gi|347007412|gb|AEO54900.1| hypothetical protein MYCTH_2298080 [Myceliophthora thermophila ATCC
42464]
Length = 2059
Score = 165 bits (418), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 156/274 (56%), Gaps = 7/274 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + +L+GD QLP V S+ + G+ +SLF R+
Sbjct: 1569 VIIDEAAQCVELSALIPLKY-GCSKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQK- 1626
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH+K HLL++QYRMHP IS FP+ +FY + DGA++ + + + G Y F +
Sbjct: 1627 NHAKDVHLLDMQYRMHPEISRFPSQEFYEGLLQDGADMGRLRLQPWHESEL-LGPYRFFD 1685
Query: 712 IIGGREDFIYH-SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G + + S N E+ +++ ++ + + K IG+++PY AQ++ +R++
Sbjct: 1686 VKGSQSRGPKNQSLVNEEELKVAMQLYRRFRTDYGKVELKGKIGIITPYKAQLLRLRQRF 1745
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
+Y ++ + D FQG E +III S VR + G IGF++ +R+NV LTRA+
Sbjct: 1746 TEKYGEGITEEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRAKSS 1805
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
LWILG R L+ E W L+ DAK R + + +
Sbjct: 1806 LWILGDSRALVQGE-FWSKLIEDAKRRDRYTSGN 1838
>gi|241953325|ref|XP_002419384.1| helicase, putative; tRNA-splicing endonuclease positive effector,
putative [Candida dubliniensis CD36]
gi|223642724|emb|CAX42978.1| helicase, putative [Candida dubliniensis CD36]
Length = 2009
Score = 165 bits (418), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 157/273 (57%), Gaps = 7/273 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E + IPL+ G +++GD QLP V S+ + + +SLF R+
Sbjct: 1539 VIIDEACQCLELSAIIPLRY-GCRKCIMVGDPNQLPPTVLSQAAASYNYEQSLFVRMQK- 1596
Query: 654 NH--SKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH S ++L++QYRMHP IS FP+ +FY +++ DG N+ + + + Y F +
Sbjct: 1597 NHPDSVYMLDVQYRMHPMISKFPSSEFYNSKLKDGDNMLELN-TRPWHKDPPLTPYRFFD 1655
Query: 712 IIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
I+G E + + S N E +++ KL + K ++G++SPY Q+ I++
Sbjct: 1656 ILGKHEKNELTRSLFNTDEAMVALQLTDKLMQIIPQDKFSGNVGIISPYKEQIRKIKEVF 1715
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
+Y + ++DGFQG E++III+S VR + G++GF+S +R+NVALTRA+
Sbjct: 1716 VRKYGKPILDEIDFNTVDGFQGQEKEIIIMSCVRASATGNVGFLSDVRRMNVALTRAKTT 1775
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNA 863
LWILG++ +L +E +W L+ DA R+C A
Sbjct: 1776 LWILGNKESLSRNE-VWRKLLTDADERKCVTQA 1807
>gi|171684931|ref|XP_001907407.1| hypothetical protein [Podospora anserina S mat+]
gi|170942426|emb|CAP68078.1| unnamed protein product [Podospora anserina S mat+]
Length = 2074
Score = 165 bits (418), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 152/274 (55%), Gaps = 7/274 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + +L+GD QLP V S+ + G+ +SLF R+
Sbjct: 1593 VIIDEAAQCVELSALIPLKY-GCSKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQK- 1650
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH+K HLL++QYRMHP IS FP+ +FY + DGA++ + + + G Y F +
Sbjct: 1651 NHAKDVHLLDMQYRMHPEISRFPSKEFYEGLLQDGADMAGLRLQPWHQS-VYLGPYRFFD 1709
Query: 712 IIGGREDFIYH-SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G + + S N E+ +K+ Q+ + + IG+++PY AQ+ +R++
Sbjct: 1710 VKGSQSRGPKNQSLVNEEELKVAMKLYQRFRSDYSNVDARGKIGIITPYKAQLHRLRQRF 1769
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
+Y ++ + D FQG E +III S VR + G IGF++ +R+NV LTRA+
Sbjct: 1770 TDKYGEGITEEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRAKSS 1829
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
LWILG R L E W L+ DAK R + +
Sbjct: 1830 LWILGDSRALQQGE-YWNKLIEDAKERDRYTTGN 1862
>gi|358371124|dbj|GAA87733.1| tRNA-splicing endonuclease [Aspergillus kawachii IFO 4308]
Length = 2117
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 155/277 (55%), Gaps = 14/277 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E + IPL+ G + +L+GD QLP V SK++ + + +SLF R+ +
Sbjct: 1538 VVIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSKVASKFQYEQSLFVRMQA- 1595
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANV---KSKSYEKQYLTGTEFGTYS 708
NH + HLL+IQYRMHP IS FP+ FY ++ DG N+ + + + + L Y
Sbjct: 1596 NHPRDVHLLDIQYRMHPEISAFPSSAFYDGRLQDGPNMAQLRVRPWHQSEL----LSPYR 1651
Query: 709 FINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F ++ G + HS NI E+ +++ ++L + IG+++PY Q+ ++
Sbjct: 1652 FFDVQGLHQSAAKGHSLINIAELRVAMQLYERLVTDFRAFNFDRKIGIITPYKGQLRELK 1711
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ Y N+ + + D FQG E ++II S VR + G IGF++ +R+NV LTRA
Sbjct: 1712 TQFAARYGNEIFNKIDFNTTDAFQGRESEVIIFSCVRASNKG-IGFLADIRRMNVGLTRA 1770
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
+ LW+LG+ + L+ E W L+ DA+ R + + D
Sbjct: 1771 KSSLWVLGNSQALVQGE-FWNGLIKDARRRNVYTDGD 1806
>gi|281210252|gb|EFA84419.1| helicase [Polysphondylium pallidum PN500]
Length = 1113
Score = 165 bits (417), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 177/338 (52%), Gaps = 30/338 (8%)
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS 652
+++IDE+ Q E E IPL L G VL+GD CQL ++ +K EAG +SLFERL +
Sbjct: 684 YVLIDESTQASEPECLIPLML-GAKQVVLVGDHCQLGPVLLAKKVIEAGLSQSLFERLIN 742
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK-QYLTGTEFGTYSFIN 711
L H L QYRMHPS+S FP+ FY Q+++ + K + Y ++ + F N
Sbjct: 743 LGHHPFRLTTQYRMHPSLSEFPSSTFYEGQLVNELSYKDRVYNDIKFPWPSPNNPMFFYN 802
Query: 712 IIGGRE------DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ--- 762
G E FI N +E S KI+ KL + +G+K IG+++PY Q
Sbjct: 803 STGAEEISSSGTSFI-----NRMEASTTEKIVTKLLE--LGTKPH-QIGIITPYEGQRSF 854
Query: 763 -VVAIRK--KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQR 819
V ++K K+ E + ++V S+D FQG E+D II+S VR N IGF+ P+R
Sbjct: 855 LVNNMQKTGKLSIELYRE----IEVASVDSFQGREKDFIILSCVRSNDNQGIGFLHDPRR 910
Query: 820 VNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKAR--LEVS 877
+NVALTRAR+ L ILG+ R L S + +W L+C K+++ + NL ++ L+
Sbjct: 911 LNVALTRARYGLIILGNARVL-SRDQLWNNLICHFKSKEVLVEGTIQ-NLKQSMVVLQKP 968
Query: 878 KELVEIGAESLTSTSQGGKKEEFEFEFVKAFRSINLIH 915
K+L G + G ++ V +N+++
Sbjct: 969 KKLYGEGKLPVPGAQPTGFNPYGDYGQVDPTHGMNMVY 1006
Score = 47.4 bits (111), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC----RTLAC 312
LN SQ+ A + L+ S + LI GPPGTGKT S ++ +++ + L C
Sbjct: 518 LNNSQISAAMKVLK-------SPLSLIQGPPGTGKTVVSSFIVHHIVKHAIKKNEKVLVC 570
Query: 313 TPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
P+NVAI +L ++ LK+V+ K +P+
Sbjct: 571 APSNVAIDQLTGKLHSIGLKVVRLCSKLREEVASPV 606
>gi|50293955|ref|XP_449389.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528703|emb|CAG62365.1| unnamed protein product [Candida glabrata]
Length = 1979
Score = 164 bits (416), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 160/275 (58%), Gaps = 10/275 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEA Q E + IPL+ G +++GD QLP V S + + +SLF R+
Sbjct: 1546 VVIDEACQCTELSAIIPLRY-GSKRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK- 1603
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
N LL++QYRMHP+IS FP+ +FY +++DG +++S + ++ + F Y F +I
Sbjct: 1604 NSKPFLLDVQYRMHPAISKFPSAEFYDGRLMDGPDMESLN-KRIWHEQEPFKPYKFFDIT 1662
Query: 714 GGR--EDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS--IGVVSPYTAQVVAIRKK 769
G+ ++ S N E+ I+++ KL++ + +K S IGV+SPY Q+ +R++
Sbjct: 1663 SGQQVQNVKTMSYTNKEEIEVAIEMVDKLFRLY-DNKIDFSNKIGVISPYKEQIQRMRRE 1721
Query: 770 IGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGS-IGFISKPQRVNVALTRAR 828
+ V +IDGFQG E++IIIIS VR + S +GF+ +R+NVALTRAR
Sbjct: 1722 FMRYFGGSITKFVDFNTIDGFQGQEKEIIIISCVRADDSQSGVGFLKDFRRMNVALTRAR 1781
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
+WILG +++L S+ +W L+ DA+ R C A
Sbjct: 1782 TSIWILGHQKSLRKSK-LWSHLIDDAEGRGCLQQA 1815
>gi|449533286|ref|XP_004173607.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
isoform 2 [Cucumis sativus]
Length = 165
Score = 164 bits (416), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/114 (71%), Positives = 94/114 (82%), Gaps = 1/114 (0%)
Query: 751 VSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGS 810
+SIGVVSPY+AQVV I++KIG +Y N +GF VKV S+DGFQGGEEDIIIISTV CNTG S
Sbjct: 1 MSIGVVSPYSAQVVTIQRKIGKKY-NCNGFNVKVSSVDGFQGGEEDIIIISTVWCNTGSS 59
Query: 811 IGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
IGF+S QR NVALTRAR+CLWILG+ +TL S S+W LV DAK R CFFNA+
Sbjct: 60 IGFLSSNQRTNVALTRARYCLWILGNFKTLSKSNSVWEELVMDAKNRGCFFNAN 113
>gi|189198704|ref|XP_001935689.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187982788|gb|EDU48276.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1954
Score = 164 bits (415), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 162/299 (54%), Gaps = 16/299 (5%)
Query: 577 ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKI 636
S + ++E++ + +++DEAAQ E + IPL+ G +L+GD QLP + SK
Sbjct: 1500 GSGHHMFRTIEVE-FDTVIVDEAAQCVEMSALIPLKY-GCAKCILVGDPKQLPPTIFSKE 1557
Query: 637 SDEAGFGRSLFERLTSLNHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKS 691
+ + +SLF R+ NH HLL++QYRMHP IS FP+ FY ++LDG A+V+
Sbjct: 1558 AVRFRYAQSLFMRMQQ-NHPNDVHLLDVQYRMHPEISQFPSQTFYDGKLLDGGDMASVRK 1616
Query: 692 KSYEKQYLTGTEFGTYSFINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQK 750
+ + + L G Y F ++ G ++ S NI E++ +++ +L + K
Sbjct: 1617 QPWHQSSL----LGPYRFFDVKGQQQKATSGKSLMNIAEINVALQLYHRLTSDFPNYNFK 1672
Query: 751 VSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGS 810
IG+++PY +Q+ I+++ Y + + D FQG E +III S VR N G
Sbjct: 1673 GKIGIITPYKSQLYEIKERFKRTYGQTIVEDIDFNTTDAFQGRENEIIIFSCVRAN--GG 1730
Query: 811 IGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNL 869
IGF+ +R+NV LTRA+ LW+LG +L S E W L+ +A+ R+ F + R L
Sbjct: 1731 IGFLDDVRRMNVGLTRAKSSLWVLGDSTSLQSGE-YWRKLILNAQERKRFTDGQVSRML 1788
Score = 42.0 bits (97), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
Query: 184 QVHD--KTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQR 241
+VH+ +TK+ F Y ++P ++ + N + T++ S+ E L +Q
Sbjct: 1185 RVHNIKRTKEHFQITY--RLIPGSKL-QKVFQKNNTLLATKIDSITSLEREYAALRGLQY 1241
Query: 242 KGQWDE--KFGPSFSSTLNESQVGAM-------LACLRRLDCG-HRSGVELIWGPPGTGK 291
DE K PS T +SQ+ + LA + + G LI GPPGTGK
Sbjct: 1242 YDLCDEIIKAKPSPLLTYKDSQIQPLILNYDLTLAQGKAIKSAIDNDGFTLIQGPPGTGK 1301
Query: 292 TKTVSMLLLTLLRIKCRT--------------------LACTPTNVAITELASRVLKLVK 331
T+T++ ++ +L R L C P+N A+ EL R+ +K
Sbjct: 1302 TRTITAIVGAILSGSFRNRGTNIAVPGKSQSDPTPKKILVCAPSNAAVDELCMRLRPGIK 1361
>gi|358055281|dbj|GAA98737.1| hypothetical protein E5Q_05425 [Mixia osmundae IAM 14324]
Length = 1976
Score = 163 bits (413), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 102/279 (36%), Positives = 154/279 (55%), Gaps = 15/279 (5%)
Query: 590 PLNF--LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLF 647
P F ++IDEAAQ E S IPL+ G +++GD QLP V S ++ +A + SLF
Sbjct: 1527 PFQFETVIIDEAAQSVEISSLIPLRY-GAKRCIMVGDPRQLPPTVLSTVAKDANYASSLF 1585
Query: 648 ERLTSLNHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGT 702
R+ NH+ HLL+IQYRMHPSIS +P+ FY ++ DG A + + S+ + L
Sbjct: 1586 VRMQK-NHADGVHLLSIQYRMHPSISAWPSEVFYGGELRDGPGIAALTASSWHRNPL--- 1641
Query: 703 EFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ 762
YSF++ G ++ HS N E + I ++ K + + +GVV+ Y AQ
Sbjct: 1642 -LPPYSFLHCSGAQQTGRNHSVFNPEEARVGVAIFKQFLKEVGDAISDIRVGVVTMYKAQ 1700
Query: 763 VVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGG-SIGFISKPQRVN 821
V +R+ + + + ++DGFQG E+D+II S VR G IGF+ +R+N
Sbjct: 1701 VFELRRLFKLAFGDDIVHRLDFSTVDGFQGQEKDVIIFSCVRSGQGSDPIGFLRDARRMN 1760
Query: 822 VALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
VALTRA+ L+ILG TL ++ W L+ +A+AR +
Sbjct: 1761 VALTRAKSSLFILGHAPTL-RTDPTWRRLIENAQARAMY 1798
Score = 45.1 bits (105), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Query: 279 GVELIWGPPGTGKTKTVSMLLLTLL-RIKC-------RTLACTPTNVAITELASRVLKLV 330
G LI GPPGTGKTKT+ L+ L R K + L C P+N AI E+A+R+ V
Sbjct: 1316 GFTLIQGPPGTGKTKTIIGLVGAFLARRKPSDGLPSEKLLICAPSNAAIDEIAARLKNGV 1375
Query: 331 KESYKR 336
+ R
Sbjct: 1376 RAEDNR 1381
>gi|145514990|ref|XP_001443400.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410778|emb|CAK76003.1| unnamed protein product [Paramecium tetraurelia]
Length = 1068
Score = 163 bits (413), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 167/304 (54%), Gaps = 19/304 (6%)
Query: 565 FCFK---RASLFFST--ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHA 619
FC K A + ST +S S KL S + + L++DEAAQ E + IPL+L G+
Sbjct: 734 FCEKILNEAEIICSTLNSSGSEKL-SKYMDQIELLIVDEAAQCTEPSNIIPLRL-GVEKM 791
Query: 620 VLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFY 679
+LIGD QL A S S + RSLFER+ N H LNIQYRM I FP+ +FY
Sbjct: 792 ILIGDPKQLAATTFSPSSTTGFYNRSLFERILDNNFQPHFLNIQYRMDSEIRKFPSFEFY 851
Query: 680 RNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQK 739
+N+++D +V + + Y F++II G+E S N E + VI+++
Sbjct: 852 QNKLIDHESVIQRKLPENYFKKQML----FLDIIDGQEKRDNTSYINEKEANLVIQLINS 907
Query: 740 LYKAWVGSKQKVSIGVVSPYTAQVVAIR---KKIGFEYENKDGFTVKVKSIDGFQGGEED 796
+ + + + +IGV+S Y AQV I+ K+ ++ D + V ++D FQG E+D
Sbjct: 908 IKEQF----KTQTIGVISSYKAQVKLIQTLIKQSNTRLKDIDNKILSVNTVDSFQGQEKD 963
Query: 797 IIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKA 856
III S VR + IGF++ +R+NVALTRA+ L+++G+ TL S +W L+ + +
Sbjct: 964 IIIFSCVRSSECKGIGFLNDGRRINVALTRAKFALFVIGNGLTL-SKGQLWRNLLQNMQE 1022
Query: 857 RQCF 860
RQ +
Sbjct: 1023 RQLY 1026
Score = 47.4 bits (111), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLL-------- 299
KF N+SQ ++ L+ G+ L+ GPPGTGKT T+ +L
Sbjct: 525 KFFKLVDQKFNKSQANSIKEILQ-----QEKGISLLQGPPGTGKTHTLIGILSGAYEYMK 579
Query: 300 LTLLRIKCRTLACTPTNVAITELASRVLK 328
+T + + L C P+N AI E+ R+++
Sbjct: 580 MTDKFPRKKILICAPSNAAIDEIILRIMR 608
>gi|255082057|ref|XP_002508247.1| predicted protein [Micromonas sp. RCC299]
gi|226523523|gb|ACO69505.1| predicted protein [Micromonas sp. RCC299]
Length = 1188
Score = 163 bits (412), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 96/268 (35%), Positives = 147/268 (54%), Gaps = 20/268 (7%)
Query: 595 VIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLN 654
+IDEA Q E + +PL G + VLIGD+ QLP + S+ +D AG G SLFER+ +
Sbjct: 793 LIDEATQATEPATVVPL-TKGCSQVVLIGDQKQLPPTIISREADAAGLGTSLFERMLARG 851
Query: 655 HSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIG 714
+L +QYRMHP+I+ +P+ FY +L G ++ + +F+++
Sbjct: 852 IRAFMLKVQYRMHPAIAAYPSKAFYSGALLSGTPPSARRAPMGFDWPVPAVPLAFVDVPD 911
Query: 715 GREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKV---SIGVVSPYTAQVVAIRKKI- 770
G E S N VE V+ I++KL + V IG+V+PY+AQV AI++ +
Sbjct: 912 GYERSDGSSQTNPVEAQKVVNIVKKLA-----AGHDVIFGEIGIVTPYSAQVRAIKRLLN 966
Query: 771 GFEYENKDGF----------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRV 820
G + E + F ++V S+DGFQG E+++I+ R N G++GF++ P+RV
Sbjct: 967 GNKPEVRSRFDAPADPNTLQALEVCSVDGFQGREKEVIVFCCTRANPNGNVGFLADPRRV 1026
Query: 821 NVALTRARHCLWILGSERTLISSESIWG 848
NV LTRAR L I+G+ TL +WG
Sbjct: 1027 NVMLTRARRGLIIIGNLGTLRRDPEVWG 1054
Score = 40.8 bits (94), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 232 ERCE-LCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTG 290
ER E L +QR+ D + +N+SQ A+ A L + V LI GPPGTG
Sbjct: 627 ERHENLTLMQRQRMIDNAMDLQAMAHMNKSQTDALEAALFQR-------VTLIQGPPGTG 679
Query: 291 KTKTVSMLLLTLLRIKCRTLACTP-TNVAITEL 322
KT T L+ LR + + CT +N+A+ L
Sbjct: 680 KTHTAVALVQMWLRNRTSPILCTSDSNIAVDNL 712
>gi|449018313|dbj|BAM81715.1| probable tRNA splicing endonuclease positive effector Sen1p
[Cyanidioschyzon merolae strain 10D]
Length = 1250
Score = 163 bits (412), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 156/291 (53%), Gaps = 23/291 (7%)
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS 652
+VIDEAAQ E + IPLQ G VL GD QLPA V S+ RSL ERL
Sbjct: 725 IVVIDEAAQATELATLIPLQY-GCERCVLAGDPQQLPATVFSRGDAGVALARSLMERLLQ 783
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY----LTGTEFGTYS 708
+ HLL+ QYRMHP+I+ FP FY+NQ+ + V+S+ Y + G Y
Sbjct: 784 AGWTGHLLDTQYRMHPAIATFPTRWFYQNQLKNDDCVRSELYRPAFHRTGPPPPLLGPYC 843
Query: 709 FINIIGGRE--DFIYHSCRNIVEVSAVIKILQKLY-KAWVGSKQKVSIGVVSPYTAQVVA 765
F++I E D S N E + +++++ LY + W S + +G+++PY AQ+
Sbjct: 844 FVDIAEATEERDATTASLSNPKEAAFAMQLVEILYERYWKASDRVWHLGILTPYRAQMRL 903
Query: 766 IRKKIGFEYENKDGF---------TVKVKSIDGFQGGEEDIIIISTVRCNTGGS-IGFIS 815
+++ + ++ G T+++ ++D FQG E+D+II S VR S IGF+
Sbjct: 904 LQQAL-----DQSGLILPGQQMPCTIEIDTVDAFQGREKDVIIFSAVRTAQHRSGIGFVG 958
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEE 866
+R+NVALTRA+ L +LG L + + W AL+CDA+ R +F + +
Sbjct: 959 DVRRLNVALTRAKVSLVVLGHAAALRAHSADWDALLCDAEQRGLYFESSSD 1009
>gi|281211277|gb|EFA85442.1| adenylyl cyclase [Polysphondylium pallidum PN500]
Length = 1439
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/305 (36%), Positives = 162/305 (53%), Gaps = 18/305 (5%)
Query: 558 SKLVLED---FCFKRASLFFST--ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQ 612
SKL D KR+ + ST S S L E P + +++DE+ Q E + IPL
Sbjct: 608 SKLQTPDSKKIMIKRSRIILSTLSGSGSMILAQPEFYP-SVVIVDESTQSCEPSTLIPLL 666
Query: 613 LAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISL 672
+ +LIGD QLP V S IS + SLFERL H+L+ QYRMHP IS
Sbjct: 667 RNPYSKVILIGDPKQLPPTVFSTISSRFNYDVSLFERLAKY-FPVHMLDTQYRMHPKISK 725
Query: 673 FPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRE-DFIYHSCRNIVEVS 731
FP+ QFY ++ DG NV Y + T ++G +F +I +E I S +N +E+
Sbjct: 726 FPSNQFYSAKLKDGENV--VKYNNSFYTDPKYGPINFYHIPDSQELKTIGKSIKNSLEIR 783
Query: 732 AVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQ 791
V +L+KL + K +S+G+++PY Q ++ E D V V ++DGFQ
Sbjct: 784 LVFTLLKKLVQDHPEVKS-MSVGIITPYKLQKKELQDAKSHFNEKMD---VVVNTVDGFQ 839
Query: 792 GGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
G E+DIII S VR IGF+ +R+NV +TRAR L+I+GS + L+ + WGA +
Sbjct: 840 GAEKDIIIFSCVRSE---KIGFLKDTRRINVGITRARRALYIVGSSK-LLEQDPNWGAYL 895
Query: 852 CDAKA 856
+ K+
Sbjct: 896 RNIKS 900
Score = 57.4 bits (137), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 250 GPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLL---TLLRIK 306
G + LN+SQ A+ L V LI GPPGTGKTKT+ LL +L +
Sbjct: 499 GTILRNQLNQSQFNAISESL------ASRHVSLIQGPPGTGKTKTIISLLAIFNAILPMT 552
Query: 307 CRTLACTPTNVAITELASRVLK 328
+ L C P+NVA+ E+ RVLK
Sbjct: 553 AKILVCAPSNVAVDEVGLRVLK 574
>gi|328866781|gb|EGG15164.1| Regulator of nonsense transcripts 1 like protein [Dictyostelium
fasciculatum]
Length = 1358
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 146/245 (59%), Gaps = 11/245 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E + IPL L + +LIGD QLP V SKIS G+ SLFERL++
Sbjct: 619 IIIDESTQSCEPSTLIPLLLNPNSKVILIGDPKQLPPTVFSKISSRHGYNVSLFERLSNY 678
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
H+L+ QYRMHPSIS FP+ +FY++++ DG NV Y + ++G +F NI
Sbjct: 679 -LPVHMLDTQYRMHPSISKFPSQRFYQSKLKDGENV--VKYTNSFYNNAKYGPINFYNIP 735
Query: 714 GGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGF 772
+E +S +NI+E V +L+KL + + K K+S+G+++PY Q + + G
Sbjct: 736 ESQEVSENGNSLKNILESKYVFVLLKKLVQEYPEVK-KMSVGIITPYKLQKKELLEARGA 794
Query: 773 EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLW 832
E D V V ++DGFQG E+DIII S VR IGF+S +R+NV +TRAR ++
Sbjct: 795 FNEKMD---VVVNTVDGFQGAEKDIIIFSCVR---NKRIGFLSDIRRINVGITRARKAIY 848
Query: 833 ILGSE 837
++G +
Sbjct: 849 VVGKQ 853
Score = 45.4 bits (106), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 24/144 (16%)
Query: 188 KTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDE 247
KTK F+ + N++ +R S+ + ++ VL + +++R + + +K +
Sbjct: 417 KTKTEFYVSKVANLITFERELKSIKQFTSHRLSKLVLSPRTFIEDRKNM--IVKKQSF-- 472
Query: 248 KFGPSFS--STLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI 305
PS LN SQ+ A+ + + + LI GPPGTGKT ++L LLRI
Sbjct: 473 -IIPSHLDLGNLNPSQLSAIQKSMIQ------DELTLIQGPPGTGKT----TIILNLLRI 521
Query: 306 -------KCRTLACTPTNVAITEL 322
K L C P+N A+ E+
Sbjct: 522 FHSILGEKETILVCAPSNTAVDEV 545
>gi|366999100|ref|XP_003684286.1| hypothetical protein TPHA_0B01790 [Tetrapisispora phaffii CBS 4417]
gi|357522582|emb|CCE61852.1| hypothetical protein TPHA_0B01790 [Tetrapisispora phaffii CBS 4417]
Length = 2074
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 153/274 (55%), Gaps = 18/274 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E + IPL+ G +++GD QLP V S + + +SLF R+
Sbjct: 1593 VIIDEACQCTELSAIIPLRY-GAKRCIMVGDPNQLPPTVLSSKASSLNYDQSLFVRMEK- 1650
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
S +LLN+QYRMHPSIS FP+L+FY ++ DG ++ + + ++ + + G Y F +II
Sbjct: 1651 KCSPYLLNVQYRMHPSISAFPSLEFYDGKLKDGPDMANIT-KRPWHSIDSLGPYKFFDII 1709
Query: 714 GGR--EDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS-IGVVSPYTAQVVAIRKKI 770
GR ++ S N E ++++ L K + IGV+SPY QV +R+
Sbjct: 1710 SGRHEQNSRTMSYNNPEEARVAVELVDFLLKRFENKYDFTGKIGVISPYKEQVFKLRR-- 1767
Query: 771 GFEYENKDGFTVK----VKSIDGFQGGEEDIIIISTVRCNT---GGSIGFISKPQRVNVA 823
E+ N G ++ +IDGFQG E++III+S VR N +GF+ +R+NVA
Sbjct: 1768 --EFRNHFGLLIEKYVDFNTIDGFQGQEKEIIILSCVRANDSDHASGVGFLKDFRRMNVA 1825
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
TRA+ LWILG R+L + +W L+ +AK R
Sbjct: 1826 FTRAKSSLWILGHHRSL-KRDKLWNHLITNAKQR 1858
>gi|302308150|ref|NP_984975.2| AER115Wp [Ashbya gossypii ATCC 10895]
gi|299789319|gb|AAS52799.2| AER115Wp [Ashbya gossypii ATCC 10895]
gi|374108198|gb|AEY97105.1| FAER115Wp [Ashbya gossypii FDAG1]
Length = 2027
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 163/292 (55%), Gaps = 15/292 (5%)
Query: 576 TASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESK 635
+ S+ L S+ +K + +++DEA Q E S IPL+ G +++GD QLP V S
Sbjct: 1542 SGSAHDVLASLGVK-FDTVIVDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSG 1599
Query: 636 ISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYE 695
+ + +SLF R+ N HLL++QYRMH IS FP+L+FY ++ +G N+ +
Sbjct: 1600 AASNFKYNQSLFVRMEK-NCKPHLLDVQYRMHSMISAFPSLEFYDGRLKNGPNM-DQVNT 1657
Query: 696 KQYLTGTEFGTYSFINIIGGR--EDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS- 752
+ + FG Y F +II G+ ++ S N E I+++ KL + ++KV
Sbjct: 1658 RPWHESQPFGPYRFFDIITGKQQQNAKTMSYVNYDECQVSIEMIDKLLSQY---EKKVDF 1714
Query: 753 ---IGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC-NTG 808
IG++SPY Q+ +++ + + +IDGFQG E++IIIIS VR ++
Sbjct: 1715 SGKIGIISPYREQMQMMKRAFRSYFGGTIFKYIDFNTIDGFQGQEKEIIIISCVRADDSK 1774
Query: 809 GSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
G +GF+ +R+NVALTRA+ LWILG ++L ++ +W L+ DAK R C
Sbjct: 1775 GGVGFLKDFRRMNVALTRAKASLWILGHHKSLYKNK-LWMHLISDAKGRDCL 1825
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 83/198 (41%), Gaps = 54/198 (27%)
Query: 205 KRIWNSLHMCGNWKVITQVL---GTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQ 261
+R + SL + ++ Q+L TD + E+ E+ +VQR + LN SQ
Sbjct: 1264 EREYTSLKGLPFYDLVGQILTASPTDDIPLEQSEVEAVQRNYK------------LNTSQ 1311
Query: 262 VGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT----VSMLLLT---------------- 301
A+++ +++L G LI GPPGTGKTKT V L T
Sbjct: 1312 AKAVISSVKKL------GFSLIQGPPGTGKTKTILGVVGFFLTTAKALPSNVIRNPTESN 1365
Query: 302 -----LLRIKCRTLACTPTNVAITELASRVL--------KLVKESYKRDSRSNTPICPLG 348
+L K + L C P+N A+ EL R+ KL K R +S+ +
Sbjct: 1366 ATSTEMLLQKQKVLICAPSNAAVDELVLRLREGLVDTDGKLFKPKLVRIGKSDAVNAAIR 1425
Query: 349 DILLFGNKDRLKVNPGFE 366
D+ L D+ +N +E
Sbjct: 1426 DLTLEELVDKRALNQSYE 1443
>gi|68465577|ref|XP_723150.1| potential nuclear RNA processing factor [Candida albicans SC5314]
gi|68465870|ref|XP_723003.1| potential nuclear RNA processing factor [Candida albicans SC5314]
gi|46445015|gb|EAL04286.1| potential nuclear RNA processing factor [Candida albicans SC5314]
gi|46445171|gb|EAL04441.1| potential nuclear RNA processing factor [Candida albicans SC5314]
Length = 2018
Score = 162 bits (410), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 155/276 (56%), Gaps = 13/276 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E + IPL+ G +++GD QLP V S+ + + +SLF R+
Sbjct: 1538 VIIDEACQCLELSAIIPLRY-GCKKCIMVGDPNQLPPTVLSQAAASYNYEQSLFVRMQK- 1595
Query: 654 NH--SKHLLNIQYRMHPSISLFPNLQFYRNQILDGANV---KSKSYEKQYLTGTEFGTYS 708
NH S ++L++QYRMHP IS FP+ +FY +++ DG + ++ + K Y
Sbjct: 1596 NHPDSVYMLDVQYRMHPMISKFPSSEFYNSKLKDGDGMLELNTRPWHKD----PPLTPYR 1651
Query: 709 FINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F +I+G E + + S N E +++ KL + K IG++SPY Q+ I+
Sbjct: 1652 FFDILGKHEKNELTRSLFNTDEAIVALQLTDKLMQLLPQDKFSGKIGIISPYKEQIRKIK 1711
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ +Y + ++DGFQG E++III+S VR + G++GF+S +R+NVALTRA
Sbjct: 1712 EVFVRKYGKPILDEIDFNTVDGFQGQEKEIIIMSCVRASATGNVGFLSDVRRMNVALTRA 1771
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
+ LWILG++ +L +E +W L+ DA R C A
Sbjct: 1772 KTTLWILGNKDSLSRNE-VWKKLLTDAGERNCITQA 1806
>gi|121704136|ref|XP_001270332.1| tRNA-splicing endonuclease, putative [Aspergillus clavatus NRRL 1]
gi|119398476|gb|EAW08906.1| tRNA-splicing endonuclease, putative [Aspergillus clavatus NRRL 1]
Length = 2137
Score = 162 bits (410), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 156/277 (56%), Gaps = 14/277 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + +L+GD QLP V SK++ + + +SLF R+ +
Sbjct: 1542 VIIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSKVASKFQYEQSLFVRMQA- 1599
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANV---KSKSYEKQYLTGTEFGTYS 708
NH + HLL+ QYRMHP IS +P+ FY ++ DG N+ +++ + + L Y
Sbjct: 1600 NHPRDVHLLDTQYRMHPEISAYPSAAFYDGKLRDGPNMAQLRARPWHQSEL----LSPYR 1655
Query: 709 FINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F ++ G ++ HS N+ E+ +++ +++ + IG+++PY Q+ ++
Sbjct: 1656 FFDVQGLHQNTTKGHSLINLAELRVAMQLYERITTDFRDYDFSGKIGIITPYKGQLRELK 1715
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ Y N V + D FQG E +III S VR + G IGF+S +R+NV LTRA
Sbjct: 1716 TQFAARYGNSIFNKVDFNTTDAFQGRESEIIIFSCVRASNKG-IGFLSDIRRMNVGLTRA 1774
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
+ LW+LG+ ++L+ E W L+ D++ R + + D
Sbjct: 1775 KSSLWVLGNSQSLVQGE-FWNGLIKDSRRRNVYTSGD 1810
>gi|363754976|ref|XP_003647703.1| hypothetical protein Ecym_7029 [Eremothecium cymbalariae DBVPG#7215]
gi|356891739|gb|AET40886.1| hypothetical protein Ecym_7029 [Eremothecium cymbalariae DBVPG#7215]
Length = 2019
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 157/276 (56%), Gaps = 18/276 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E S IPL+ G +++GD QLP V S + + +SLF R+ +
Sbjct: 1562 VIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASTYKYNQSLFVRMEN- 1619
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
N HLL++QYRMH IS FP+L+FY ++ DG ++ + + ++Q+ F Y F +I+
Sbjct: 1620 NCKPHLLDVQYRMHSMISSFPSLEFYDGKLKDGPDMDNIN-QRQWHETQPFAPYKFFDIL 1678
Query: 714 GGRED--------FIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVA 765
G++ Y C+ V + V K+L +LY+ V K IG++SPY Q+
Sbjct: 1679 TGKQQQNAKTMSYVNYDECQ--VSIEMVDKLL-RLYEKKVDFTGK--IGIISPYREQMQM 1733
Query: 766 IRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC-NTGGSIGFISKPQRVNVAL 824
++K + + +IDGFQG E++IIIIS VR ++ ++GF+ +R+NVAL
Sbjct: 1734 MKKAFRSYFGGTIFTYIDFNTIDGFQGQEKEIIIISCVRADDSKNNVGFLKDFRRMNVAL 1793
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
TRA+ LWILG ++L ++ +W L+ DAK R C
Sbjct: 1794 TRAKTSLWILGHHKSLCRNK-LWMNLISDAKTRGCL 1828
Score = 47.8 bits (112), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 40/147 (27%)
Query: 205 KRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGA 264
+R + SL + +++Q++ ++ E V++ + LN SQ A
Sbjct: 1267 EREYTSLQGLPYYDLVSQIITAKPTEEQHAEDAEVEKV---------KINYKLNTSQATA 1317
Query: 265 MLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLL---LTLLRI---------------- 305
+++ ++ L G LI GPPGTGKTKT+ ++ L+ +R+
Sbjct: 1318 VVSTVKNL------GFSLIQGPPGTGKTKTILGIVGYFLSTIRVSPSNVIKNPTQVGNIS 1371
Query: 306 ------KCRTLACTPTNVAITELASRV 326
K + L C P+N A+ EL R+
Sbjct: 1372 TEQLLQKQKVLICAPSNAAVDELVLRL 1398
>gi|328871491|gb|EGG19861.1| Regulator of nonsense transcripts [Dictyostelium fasciculatum]
Length = 1534
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 160/286 (55%), Gaps = 15/286 (5%)
Query: 567 FKRASLFFST--ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGD 624
+ A + ST S+S L +P + +++DE+ Q E + IPL + +LIGD
Sbjct: 734 IRSARIVLSTLSGSASTMLAKAGCRP-SIIIVDESTQSCEPSTLIPLLRNFRSKVILIGD 792
Query: 625 ECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQIL 684
QLP V S IS + SLFERL++ H+L+ QYRMHPSIS FP+ QFY+ ++
Sbjct: 793 PKQLPPTVFSDISSRFNYDVSLFERLSNY-LPVHMLDTQYRMHPSISKFPSDQFYQAKLK 851
Query: 685 DGANVKSKSYEKQYLTGTEFGTYSFINIIGGRED-FIYHSCRNIVEVSAVIKILQKLYKA 743
DG NV Y + ++G +F +I +ED I S +N +E+ V +L+KL +
Sbjct: 852 DGENV--VKYSNSFYNDKKYGPINFYHIPDSQEDTTIGKSIKNNLEIKLVYVLLKKLVQE 909
Query: 744 WVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTV 803
+ K K+S+G+++PY Q + + G E D V V ++DGFQG E+DIII S V
Sbjct: 910 YPEVK-KMSVGIITPYKLQKKELLEAKGAFNEKMD---VVVNTVDGFQGAEKDIIIFSCV 965
Query: 804 RCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGA 849
R IGF+ +R+NV +TRAR ++++G +L+ + WGA
Sbjct: 966 R---NKKIGFLRDTRRINVGITRARRAIYVVGYS-SLLEQDPNWGA 1007
Score = 53.1 bits (126), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 9/75 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLL---LTLLRIKCRTLACT 313
LN SQ+ A+ C+ + + LI GPPGTGKT T+ LL ++L +C+ L C
Sbjct: 619 LNPSQMIAIKQCM------IQDELTLIQGPPGTGKTTTILSLLGIYHSILPPQCQILVCA 672
Query: 314 PTNVAITELASRVLK 328
P+N A+ E+ R L+
Sbjct: 673 PSNTAVDEIGIRFLR 687
>gi|222628875|gb|EEE61007.1| hypothetical protein OsJ_14822 [Oryza sativa Japonica Group]
Length = 344
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/275 (34%), Positives = 146/275 (53%), Gaps = 6/275 (2%)
Query: 589 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
+ + ++IDEAAQ E + IPL + G L+GD QLPA V S + + G+G SLF+
Sbjct: 3 RAFDVVIIDEAAQAVEPATLIPL-IHGCKQVFLVGDPVQLPATVISSTAQKLGYGTSLFK 61
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYS 708
R + +L IQYRMHP IS+FP+ +FY + DG + K Y + FG +
Sbjct: 62 RFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEGLSKKRPWHSY---SCFGPFC 118
Query: 709 FINIIGGR-EDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F ++ G + S N EV + + ++ + K + V+SPY QV ++
Sbjct: 119 FFDVDGTESQPSGSGSWVNEDEVEFITLLYHQMAMRYPELKSSSQVAVISPYRHQVKLLK 178
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ ++ + V ++DGFQG E++++I S VRCN IGF+S +R+NVA+TRA
Sbjct: 179 DHFRSTFGDQSKEVIDVNTVDGFQGCEKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRA 238
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFN 862
R + ++GS TL + W LV AK R +F
Sbjct: 239 RSAVLVVGSASTL-KEDKHWNNLVESAKERGRYFQ 272
>gi|225678137|gb|EEH16421.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 2216
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 168/310 (54%), Gaps = 18/310 (5%)
Query: 561 VLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAV 620
+LED A+L + S S++I+ ++IDEAAQ E + IPL+ G + +
Sbjct: 1529 ILEDAHVLCATL---SGSGHEMFQSLDIE-FETVIIDEAAQSIELSALIPLKY-GCSKCI 1583
Query: 621 LIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSK--HLLNIQYRMHPSISLFPNLQF 678
L+GD QLP V SK++ + +SLF R+ + NH + HLL+ QYRMHP IS FP+ F
Sbjct: 1584 LVGDPKQLPPTVLSKVASRFQYEQSLFVRMQA-NHPQDVHLLDTQYRMHPEISRFPSAAF 1642
Query: 679 YRNQILDGANV---KSKSYEKQYLTGTEFGTYSFINIIGGREDFIY-HSCRNIVEVSAVI 734
Y ++ DG ++ +S+ + K L G Y F ++ G HS N+ EV +
Sbjct: 1643 YDGRLQDGPDMDKLRSRIWHKSEL----LGPYRFFDVQGLHSSAPKGHSLVNLAEVRVAM 1698
Query: 735 KILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGE 794
K+ ++L + IG+++PY Q+ ++ + +Y + ++ + D FQG E
Sbjct: 1699 KLYERLTTDFKIYDFTNKIGIITPYKGQLREMKNQFANKYGSSIFTMIEFNTTDAFQGRE 1758
Query: 795 EDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDA 854
+III S VR + G IGF++ +R+NV LTRA+ LW+LGS ++L+ E W L+ DA
Sbjct: 1759 CEIIIFSCVRASDRG-IGFLADIRRMNVGLTRAKSSLWVLGSSKSLVQGE-FWRGLISDA 1816
Query: 855 KARQCFFNAD 864
R+ D
Sbjct: 1817 HTRKLVTQGD 1826
>gi|255556880|ref|XP_002519473.1| conserved hypothetical protein [Ricinus communis]
gi|223541336|gb|EEF42887.1| conserved hypothetical protein [Ricinus communis]
Length = 826
Score = 161 bits (408), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/313 (33%), Positives = 164/313 (52%), Gaps = 11/313 (3%)
Query: 556 TTSKLVLEDFCFKRASLFFSTASSSYKL-HSVEIKPLNFLVIDEAAQLKESESTIPLQLA 614
T +L++ ++L FS ++ KL H ++ ++IDEAAQ E + +PL
Sbjct: 456 TIRTAILDEAVIVFSTLSFSGSAMFSKLNHGFDV-----VIIDEAAQAVEPATLVPLA-N 509
Query: 615 GINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFP 674
G L+GD QLPA V S I+++ G+ SLFERL + ++L +QYRMHP I FP
Sbjct: 510 GCKQVFLVGDPKQLPATVISPIAEKFGYKTSLFERLQRAGYPVNMLKMQYRMHPQIRDFP 569
Query: 675 NLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCR--NIVEVSA 732
+ +FY ++ D + K+ ++ + FG + F +I G+E S N EV
Sbjct: 570 SKEFYSEELQDAEKMDEKT-KRDWHEYRCFGPFCFFDIHEGKESQPSGSGSWVNNDEVDF 628
Query: 733 VIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQG 792
V+ + KL + ++SPY QV ++ + + + V ++++DGFQG
Sbjct: 629 VLHMYHKLVTMHPKLRSSSQFAIISPYRNQVKLLQDRFRDMFGQESEQFVDIQTVDGFQG 688
Query: 793 GEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVC 852
E+D+ I S VR N IGF+S +R+NV +TRA+ + ++GS TL S ES W LV
Sbjct: 689 REKDVAIFSCVRANKDRGIGFVSDSRRMNVGITRAKSTVLVVGSASTLKSDES-WKRLVE 747
Query: 853 DAKARQCFFNADE 865
A+ R F D+
Sbjct: 748 SAEQRGVLFKVDK 760
Score = 46.6 bits (109), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 138/342 (40%), Gaps = 72/342 (21%)
Query: 49 VEKIPESFQSVKQYFGSFVFPLLEETRMQL--RSGLEAMRRAPYAQVIAFEELKPYGTNQ 106
+ ++ S++ V +Y +F L EE + Q+ R E + + V+ E +
Sbjct: 53 LRQVKNSYKDVDEYLETFEPLLFEEVKAQIIQRKDDEEVTTSVMRLVLECNEAE------ 106
Query: 107 YGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDE 166
+ +S G+E + D+L+L+ EK+ D R++ F V
Sbjct: 107 -----GFLFPAVSFGGEEDERISQNDLLLLSK---EKIKDSRKLPEVHAFALV------- 151
Query: 167 DENKKENRYKVKAR----------NNMQVHDKTKKSFFFIYLTNILPNKRIWNSLHMCGN 216
E+++ +RY+++ +N++ H + K F+ K I+ SL +C
Sbjct: 152 -EHRQHDRYRLRMFLDGEVRQLNFDNLETHPRLLKMRAFMTAPRKPEEKPIF-SLKICSL 209
Query: 217 WKVITQVLGTDSV--------VDERCELCSVQRKGQW--DEKFGPSFSSTLNESQVGAML 266
+ + L S+ + + ++ + + W F LN+SQ+ A+
Sbjct: 210 STISREYLALRSISSLPFKDLILKATDINAGSEEQAWKVSVPLREYFKGNLNKSQLEAIN 269
Query: 267 ACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRV 326
A L R LI GPPGTGKT+T+ LL +L +P V +T+ SR
Sbjct: 270 AGL------SRKAFVLIQGPPGTGKTQTILALLSVILH-------ASPARV-LTKGTSRE 315
Query: 327 LKL-----VKESYKRDSRSNTPICPLGDILLFGNKDRLKVNP 363
+K ++E Y +R++ + GN R + P
Sbjct: 316 IKRGPALPIQEKYNHWARASP--------WMIGNNPRDNIMP 349
>gi|392591642|gb|EIW80969.1| hypothetical protein CONPUDRAFT_104043 [Coniophora puteana RWD-64-598
SS2]
Length = 1855
Score = 161 bits (408), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/301 (35%), Positives = 166/301 (55%), Gaps = 14/301 (4%)
Query: 567 FKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDEC 626
+ A + ST S + ++E ++IDEAAQ E S IPL+ +L+GD
Sbjct: 1425 LQEADVICSTLSGAGH-ETIEQLEFEMVIIDEAAQAIELSSLIPLKFP-CARCILVGDPQ 1482
Query: 627 QLPAMVESKISDEAGFGRSLFERLTSLN-HSKHLLNIQYRMHPSISLFPNLQFYRNQILD 685
QLP V S+ + + + +SLF RL + HLL+IQYRMHP IS P+ FY+ ++ D
Sbjct: 1483 QLPPTVLSQDACKYLYNQSLFVRLQKHRPDAVHLLSIQYRMHPDISRLPSRIFYQGRLQD 1542
Query: 686 GANVKSKSYEKQYLTGTEFGTYSFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAW 744
G + K+ + + GTY F N+ G+E + S +N++E + + +L +
Sbjct: 1543 GPGMAEKT-RQVWHDNPLLGTYRFFNVSKGQESESNGRSLKNVLESQVAVALFSRLRTEY 1601
Query: 745 VGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVK----SIDGFQGGEEDIIII 800
G +GVVS Y QV+ +++ +E + G +K K ++DGFQG E+DIII+
Sbjct: 1602 KGIDFDFRVGVVSMYRGQVLELQRA----FEQRFGADIKGKVQFHTVDGFQGQEKDIIIL 1657
Query: 801 STVRCNTG-GSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQC 859
S VR G S+GF+S +R+NV++TRA+ L+ILG+ TL S+S W ++ DA+ R
Sbjct: 1658 SCVRAGPGLQSVGFLSDVRRMNVSITRAKSSLFILGNAATLERSDSNWRQIIQDARTRNV 1717
Query: 860 F 860
Sbjct: 1718 L 1718
>gi|258572474|ref|XP_002544999.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905269|gb|EEP79670.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 2153
Score = 161 bits (408), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 156/274 (56%), Gaps = 8/274 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + +L+GD QLP V SK + + +SLF R+ +
Sbjct: 1540 VIIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSKEASRFQYEQSLFVRMQA- 1597
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH + HLL+ QYRMHP IS FP+ FY ++ DG ++ ++ + + + G Y F +
Sbjct: 1598 NHPQDVHLLDTQYRMHPEISRFPSTAFYDGRLQDGPDM-ARLRMRPWHNTSLLGPYRFFD 1656
Query: 712 IIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G HS N+ E+ +++ ++L + IG+++PY Q+ ++++
Sbjct: 1657 VQGMHASAPKGHSLVNLAELRVAMRLYERLIADFPTYDFSGKIGIITPYKGQLRELKQQF 1716
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
+Y N V+ + D FQG E ++II S VR ++ G IGF++ +R+NV LTRA+
Sbjct: 1717 ANKYGNAIFKAVEFNTTDAFQGRECEVIIFSCVRASSHG-IGFLADIRRMNVGLTRAKSS 1775
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
LW+LG+ ++L+ E W LV DA+ R + + D
Sbjct: 1776 LWVLGNSQSLVRGE-FWRGLVKDARERNLYTDGD 1808
>gi|402223041|gb|EJU03106.1| hypothetical protein DACRYDRAFT_115362 [Dacryopinax sp. DJM-731 SS1]
Length = 2132
Score = 161 bits (408), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 149/275 (54%), Gaps = 5/275 (1%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E S IPL+ +L+GD QLP V S+I+++ G+ RSLF R+
Sbjct: 1593 VVIDEAAQSVEMSSLIPLKYQ-CKRCILVGDPEQLPPTVLSQIAEQQGYSRSLFVRIMHR 1651
Query: 654 N-HSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ HLL+IQYRMHP IS + FY N++ DG + K+ + + F Y F ++
Sbjct: 1652 RPEAVHLLSIQYRMHPEISALDSAMFYDNRLKDGPGMAEKTAQP-WHADPLFSPYRFFDV 1710
Query: 713 IGGR-EDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G + HS N E S ++ + ++ + IG+V+ Y Q+ +R+
Sbjct: 1711 DGQETKARAGHSLVNDAEASMILGLFGRIRAEFPAVNFDYRIGIVTMYREQMFKLRRMFR 1770
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG-GSIGFISKPQRVNVALTRARHC 830
Y V ++DGFQG E+DIII+S VR S+GF++ +R NVA+TRAR
Sbjct: 1771 DYYGEHILTAVDFNTVDGFQGQEKDIIILSCVRAGPNQSSVGFLADRRRTNVAITRARSN 1830
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNADE 865
L+I G+ TL S++IW ++V +A+ R D+
Sbjct: 1831 LFIFGNAATLERSDAIWKSIVQNAQERNVLMKVDQ 1865
Score = 49.7 bits (117), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 21/100 (21%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLR------------ 304
+NE Q A+L + G LI GPPGTGKTKT+ L+ L
Sbjct: 1352 VNEPQANAILGSM------QGDGFTLIQGPPGTGKTKTICGLVGCWLSKRGSATHPARPS 1405
Query: 305 ---IKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSN 341
K + L C P+N AI E+A R+ V+ S + + +N
Sbjct: 1406 EKPAKSKILICAPSNAAIDEVARRIKDGVRTSNGQRTSAN 1445
>gi|238880881|gb|EEQ44519.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 2018
Score = 161 bits (407), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 155/276 (56%), Gaps = 13/276 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E + IPL+ G +++GD QLP V S+ + + +SLF R+
Sbjct: 1538 VIIDEACQCLELSAIIPLRY-GCKKCIMVGDPNQLPPTVLSQAAASYNYEQSLFVRMQK- 1595
Query: 654 NH--SKHLLNIQYRMHPSISLFPNLQFYRNQILDGANV---KSKSYEKQYLTGTEFGTYS 708
NH S ++L++QYRMHP IS FP+ +FY +++ DG + ++ + K Y
Sbjct: 1596 NHPDSVYMLDVQYRMHPMISKFPSSEFYNSKLKDGDGMLELNTRPWHKD----PPLTPYR 1651
Query: 709 FINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F +I+G E + + S N E +++ KL + + IG++SPY Q+ I+
Sbjct: 1652 FFDILGKHEKNELTRSLFNTDEAIVALQLTDKLMQLLPQDRFSGKIGIISPYKEQIRKIK 1711
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ +Y + ++DGFQG E++III+S VR + G++GF+S +R+NVALTRA
Sbjct: 1712 EVFVRKYGKPILDEIDFNTVDGFQGQEKEIIIMSCVRASATGNVGFLSDVRRMNVALTRA 1771
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
+ LWILG++ +L +E +W L+ DA R C A
Sbjct: 1772 KTTLWILGNKDSLSRNE-VWKKLLTDAGERNCITQA 1806
>gi|374723515|gb|EHR75595.1| putative DNA helicase [uncultured marine group II euryarchaeote]
Length = 662
Score = 161 bits (407), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/271 (35%), Positives = 148/271 (54%), Gaps = 8/271 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DEA Q E + +P+ G VL+GD QLP V S+ + + G G+SLFERLT
Sbjct: 389 VLMDEATQASEPSALVPIT-RGCRQLVLVGDHKQLPPTVISEAAQQGGLGQSLFERLTEC 447
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
H+L QYRMHP+I +P+ +FY +++ DG + +L +F+ I
Sbjct: 448 GLDTHMLTTQYRMHPTIREYPSARFYEDRLDDGCTPADRPPAAGFLWPDWDHPVAFVPID 507
Query: 714 GGR-EDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQV---VAIRKK 769
G D S N+ E + V+ I+ L A G IGV++PY+ QV V + ++
Sbjct: 508 GSEIVDEEGSSKSNLDEAAKVLSIVNGLLSA--GDLTPADIGVITPYSGQVRLLVDLFEQ 565
Query: 770 IGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
G E +++KS+DG+QG E++II+ S VR N G IGF+ +R+NVA+TRAR
Sbjct: 566 AGGREEGAPYAGLEIKSVDGYQGREKEIIVFSAVRANEHGEIGFLRDRRRLNVAITRARR 625
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCF 860
L +LG+ +TL + W A + A+ R F
Sbjct: 626 GLIVLGNTKTL-RHDGTWRAWLDWAEERNLF 655
Score = 42.0 bits (97), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 256 TLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACTP 314
TLN SQ A+ + L R + LI GPPGTGKT T LL L+ I + LA
Sbjct: 213 TLNPSQRAAVESALERR-------LTLIQGPPGTGKTHTAVHLLSALVNIGRGPILATAE 265
Query: 315 TNVAI 319
+NVA+
Sbjct: 266 SNVAV 270
>gi|66804903|ref|XP_636184.1| hypothetical protein DDB_G0289503 [Dictyostelium discoideum AX4]
gi|60464545|gb|EAL62683.1| hypothetical protein DDB_G0289503 [Dictyostelium discoideum AX4]
Length = 1255
Score = 161 bits (407), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 154/285 (54%), Gaps = 6/285 (2%)
Query: 568 KRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQ 627
K S+ FST + S E + ++IDE+ Q E S IPL L I +L+GD Q
Sbjct: 799 KSTSIVFSTLAGSGSKAIFENFSPDIVLIDESTQSSEPTSIIPLSLGSIKKLILVGDPVQ 858
Query: 628 LPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGA 687
L + SK + G SLFERL + LN QYRMHP IS F + +FY + DG
Sbjct: 859 LAPTIFSKDGADCGLKISLFERLAK-SIDVQFLNTQYRMHPVISKFISEEFYNGTLKDGE 917
Query: 688 NVKSKSYEK-QYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVG 746
NV S+ ++ FG F N+ + I S N E+ V ++++L + +
Sbjct: 918 NVSIDSFNNCKFHFDPSFGPMKFFNLPKSDQIVIKKSIMNQDEIDKVFTLIKELIEKYPE 977
Query: 747 SKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCN 806
K K+S G+++PY Q++ I++++ E++ + V +IDG QG E+DIII+S VRC
Sbjct: 978 CK-KLSFGIITPYKLQMIQIKEQLN-RSEHR-YLNISVSTIDGVQGSEKDIIIMSCVRCT 1034
Query: 807 TGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
IGF+S +R+NVALTRA+ L+++G+ L ++ WG +
Sbjct: 1035 EKYGIGFLSDRRRINVALTRAKLGLYVIGTSWVL-EKDNTWGNFL 1078
Score = 63.9 bits (154), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 12/87 (13%)
Query: 248 KFGPSFSST----LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL 303
KF P+ + LNESQ+ A+ + L SG+ LI GPPGTGKT T++ LL LL
Sbjct: 674 KFPPTLETICKEKLNESQLNAIKSSLVE------SGITLIQGPPGTGKTTTINYLLSVLL 727
Query: 304 RI--KCRTLACTPTNVAITELASRVLK 328
I K + L C P++ ++ E+A R LK
Sbjct: 728 AIDKKFKILVCGPSHASVDEVAKRCLK 754
>gi|226287635|gb|EEH43148.1| DEAD-box type RNA helicase [Paracoccidioides brasiliensis Pb18]
Length = 2162
Score = 161 bits (407), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 168/310 (54%), Gaps = 18/310 (5%)
Query: 561 VLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAV 620
+LED A+L + S S++I+ ++IDEAAQ E + IPL+ G + +
Sbjct: 1529 ILEDAHVLCATL---SGSGHEMFQSLDIE-FETVIIDEAAQSIELSALIPLKY-GCSKCI 1583
Query: 621 LIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSK--HLLNIQYRMHPSISLFPNLQF 678
L+GD QLP V SK++ + +SLF R+ + NH + HLL+ QYRMHP IS FP+ F
Sbjct: 1584 LVGDPKQLPPTVLSKVASRFQYEQSLFVRMQA-NHPQDVHLLDTQYRMHPEISRFPSAAF 1642
Query: 679 YRNQILDGANV---KSKSYEKQYLTGTEFGTYSFINIIGGREDFIY-HSCRNIVEVSAVI 734
Y ++ DG ++ +S+ + K L G Y F ++ G HS N+ EV +
Sbjct: 1643 YDGRLQDGPDMDKLRSRIWHKSEL----LGPYRFFDVQGLHSSAPKGHSLVNLAEVRVAM 1698
Query: 735 KILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGE 794
K+ ++L + IG+++PY Q+ ++ + +Y + ++ + D FQG E
Sbjct: 1699 KLYERLTTDFKIYDFTNKIGIITPYKGQLREMKNQFANKYGSSIFTMIEFNTTDAFQGRE 1758
Query: 795 EDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDA 854
+III S VR + G IGF++ +R+NV LTRA+ LW+LGS ++L+ E W L+ DA
Sbjct: 1759 CEIIIFSCVRASDRG-IGFLADIRRMNVGLTRAKSSLWVLGSSKSLVQGE-FWRGLINDA 1816
Query: 855 KARQCFFNAD 864
R+ D
Sbjct: 1817 HTRKLVTQGD 1826
>gi|385305772|gb|EIF49721.1| putative nuclear rna processing factor [Dekkera bruxellensis
AWRI1499]
Length = 1066
Score = 160 bits (406), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 156/276 (56%), Gaps = 25/276 (9%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E + IPL+ G V++GD QLP V S+ + + +SLF R+ +
Sbjct: 639 VVIDEAAQCTELSAIIPLRY-GCTKCVMVGDPNQLPPTVLSQKAASYKYEQSLFVRIQN- 696
Query: 654 NH--SKHLLNIQYRMHPSISLFPNLQFYRNQILDGANV---KSKSYEKQYLTGTEFGTYS 708
NH S +LLN+QYRMHP IS+FP+ +FY +++LDG N+ SK + Y G Y
Sbjct: 697 NHKXSVYLLNVQYRMHPEISMFPSKEFYHSRLLDGPNMAENNSKPWNSLY------GPYR 750
Query: 709 FINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKA-----WVGSKQKVSIGVVSPYTAQ 762
F ++ G E + S N E S +++++ L++ W G +G++SPY Q
Sbjct: 751 FFDVKGAEEQNEATKSVFNYTEASLALELVEDLFEKFSEINWAGL-----VGIISPYKEQ 805
Query: 763 VVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNV 822
V ++K + + ++DGFQG E+++I+ S V IGF++ +R+NV
Sbjct: 806 VKLLKKLFINRFGRIITTQIDFNTVDGFQGQEKEVIVFSCVXAENHTGIGFLADIRRMNV 865
Query: 823 ALTRARHCLWILGSERTLISSESIWGALVCDAKARQ 858
ALTRAR LWILGS+ L+++++ W L+ +A R
Sbjct: 866 ALTRARSSLWILGSKXALVNNKT-WRDLIENATERH 900
>gi|225461912|ref|XP_002265434.1| PREDICTED: probable helicase DDB_G0274399-like [Vitis vinifera]
Length = 831
Score = 160 bits (406), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 155/295 (52%), Gaps = 6/295 (2%)
Query: 570 ASLFFSTASSSYKLHSVEIKP-LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 628
A++ FST S S ++ + ++IDEAAQ E + +PL G L+GD QL
Sbjct: 465 AAIVFSTLSFSGSSLFSKLNSGFDVVIIDEAAQAVEPATLVPLA-NGCKQVFLVGDPVQL 523
Query: 629 PAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
PA V S I+++ G+G SLF+R + +L QYRMHP I FP+ +FY + DG +
Sbjct: 524 PATVISPIAEKFGYGMSLFKRFQRAGYPVQMLKTQYRMHPEIRSFPSKEFYDEALEDGPD 583
Query: 689 VKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVG 746
VK ++ + + FG + F +I G+E S N+ EV V+ + KL +
Sbjct: 584 VKDQTV-RLWHDYRCFGPFCFFDIHEGKESQPSGSGSWVNVDEVEFVLLMYHKLVTRYPE 642
Query: 747 SKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCN 806
K + ++SPY QV R++ + + V + ++DGFQG E+D+ I S VR +
Sbjct: 643 LKSSSRLAIISPYRHQVKLFRERFQDTFGVESDKVVDINTVDGFQGREKDVAIFSCVRAS 702
Query: 807 TGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFF 861
IGF++ +R+NV +TRAR + ++GS TL E W L+ A+ R C
Sbjct: 703 KDKGIGFVADFRRMNVGITRARASVLVVGSASTLKKDEH-WNNLLESAEKRNCLL 756
>gi|66821529|ref|XP_644230.1| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
gi|75013564|sp|Q86AS0.1|Y4399_DICDI RecName: Full=Probable helicase DDB_G0274399
gi|60472139|gb|EAL70092.1| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
Length = 967
Score = 160 bits (406), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 165/319 (51%), Gaps = 30/319 (9%)
Query: 560 LVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHA 619
LVL++ +L FS AS K+ + ++IDEAAQ E+ + IP+Q G
Sbjct: 558 LVLDEADIVATTLSFSGASLLTKMAG----GFDIVIIDEAAQAVETSTLIPIQ-HGCKKV 612
Query: 620 VLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFY 679
VL+GD QLPA + S ++ + + +SLF+RL N S H+L QYRMH I FP+ FY
Sbjct: 613 VLVGDPKQLPATIISPLAIKYKYDQSLFQRLQEKN-SPHMLTTQYRMHSLIRAFPSRHFY 671
Query: 680 RNQILDGANVKSKSYEKQYLTGTEFGTYSFINI-------IGGREDFIYHSCRNIVEVSA 732
++ +LDG N+ S++ Y + FG F ++ GG F H C+
Sbjct: 672 QDLLLDGPNIPSRA--THYHSNPFFGPLVFYDLSWSTETKPGGGSVFNEHECK------M 723
Query: 733 VIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQG 792
+ + Q K + IG++SPY QV+A+R+ ++N G + + ++DGFQG
Sbjct: 724 AMYLFQLFTKVYPDEDFASRIGIISPYRQQVLALREI----FKNYPG--ISIDTVDGFQG 777
Query: 793 GEEDIIIISTVRCNT--GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGAL 850
E +III S VR G IGF+S +R+NVALTR R L ILG+ + L S W L
Sbjct: 778 REREIIIFSCVRAPVEEGAGIGFLSDVRRMNVALTRPRSSLLILGNTKAL-SINKDWNEL 836
Query: 851 VCDAKARQCFFNADEERNL 869
+ + Q +++ L
Sbjct: 837 IQHTQNNQQLIPVTKDQPL 855
>gi|303283432|ref|XP_003061007.1| tRNA-splicing endonuclease positive effector [Micromonas pusilla
CCMP1545]
gi|226457358|gb|EEH54657.1| tRNA-splicing endonuclease positive effector [Micromonas pusilla
CCMP1545]
Length = 1099
Score = 160 bits (406), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 149/277 (53%), Gaps = 22/277 (7%)
Query: 591 LNF--LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
NF +++DEA+Q+ E S +PL G + VL+GD QLP V + + AG SLF+
Sbjct: 691 FNFSAVLLDEASQVTEPSSLVPLS-KGCHQLVLVGDHKQLPPTVTCRDAGNAGLSTSLFD 749
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYS 708
RL ++ LL++Q+RMHP++S FP+ FY ++ G + + + +
Sbjct: 750 RLANMGVKPKLLDVQFRMHPALSRFPSDAFYDGRVKSGTLARDRPAPSGFAWPNAGVPIA 809
Query: 709 FI--NIIGGREDFIYHSCR-------NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPY 759
F+ + G + H R N E V+ +L +L +A G + +GVV+PY
Sbjct: 810 FVPVGVPGVSGAYGGHERREGNGSFVNQREADVVVDVLSRLLRAGGGELEPRDVGVVTPY 869
Query: 760 TAQVVAIRKKI-------GFEYE-NKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSI 811
AQV IR+++ G + E K G V+V S+DG+QG E++++++STVR N G++
Sbjct: 870 AAQVRHIRRQLRNRGIQTGIDRETGKPG--VEVSSVDGYQGREKEVMVVSTVRSNDRGTM 927
Query: 812 GFISKPQRVNVALTRARHCLWILGSERTLISSESIWG 848
GF+S +R NV LTRA+ + + G TL S WG
Sbjct: 928 GFVSDARRCNVTLTRAKRGVVVCGDPNTLASDHVTWG 964
>gi|145491971|ref|XP_001431984.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399091|emb|CAK64586.1| unnamed protein product [Paramecium tetraurelia]
Length = 935
Score = 160 bits (405), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 146/266 (54%), Gaps = 16/266 (6%)
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS 652
F++IDEA Q E E +P+ L G H +L+GD QL +V+S+ + G RSLFERL
Sbjct: 543 FVLIDEATQAIEPECLLPM-LKGAKHVILVGDHRQLGPVVQSREAASVGLDRSLFERLVQ 601
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L L +QYRMHP +++FP+ FY + +G + +++ + + FIN+
Sbjct: 602 LGIRPVRLQVQYRMHPELTVFPSNTFYEGTLQNGVTISDRTHSGNFPWPNKQKPMIFINV 661
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGF 772
G ++ + S + + + + Q +Y + + + IG+++PY Q I
Sbjct: 662 TG--QEQLSASGTSYLNTQEAVAVEQAVYYLYQNTVKLNKIGIITPYKGQRTYI-----L 714
Query: 773 EYENKDG-------FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALT 825
Y ++G ++V S+DGFQG E+D IIIS VR N IGF++ P+R+NV +T
Sbjct: 715 SYLQRNGQLPYNQYRDIEVASVDGFQGREKDFIIISCVRSNDTQGIGFLTNPRRLNVTIT 774
Query: 826 RARHCLWILGSERTLISSESIWGALV 851
RAR+ L ++G+ R L S +++W ++
Sbjct: 775 RARYGLIVIGNARVL-SKDNLWNNML 799
Score = 44.7 bits (104), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 277 RSGVELIWGPPGTGKTKTVSMLLLTLLRI------KCRTLACTPTNVAITELASRVLK 328
+S + LI GPPGTGKT T + ++ L++ + + L C P+N+ + +LA ++ K
Sbjct: 388 KSPLSLIQGPPGTGKTVTSATIVYQLVKAMEKQKQRGQILVCAPSNIVVDQLAEKINK 445
>gi|308810817|ref|XP_003082717.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
gi|116061186|emb|CAL56574.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
Length = 878
Score = 160 bits (405), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 108/288 (37%), Positives = 154/288 (53%), Gaps = 25/288 (8%)
Query: 562 LEDF---CFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINH 618
+EDF RA L F T +SS + ++P + L++DEAAQ E E IP L
Sbjct: 573 VEDFVREALHRARLVFCTLASSGQSLCQSMEPPDVLLVDEAAQALEPEIAIPF-LRLPRK 631
Query: 619 AVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSK-HLLNIQYRMHPSISLFPNLQ 677
+L+GD QLPA + S+++ G RSL ERL SL+ S +LL+ QYRMHP IS +P+ +
Sbjct: 632 VLLVGDPAQLPATMCSELARRLGHARSLMERLMSLDDSAANLLDTQYRMHPRISSWPSAR 691
Query: 678 FYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI-----IGGREDFIYHSCRNIVEVSA 732
+Y +++D +V + E+ Y F+++ GGR S RN E A
Sbjct: 692 YYSGRVMDAEHVIER--EQPLDFPRWLPPYVFVDVKRGVEYGGR----GMSKRNDAEAEA 745
Query: 733 VIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQG 792
V +Q + + SI V++ Y+AQV IR + GF V S+D FQG
Sbjct: 746 VCDAIQAIRRG-----STFSIVVITFYSAQVRKIRAALA--ARGLRGF--DVHSVDSFQG 796
Query: 793 GEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTL 840
E D+++ S VR NT +GF+S +R+NVALTRA+H L L S TL
Sbjct: 797 SEADVVVCSAVRSNTKARVGFLSDSRRLNVALTRAKHSLVFLASSDTL 844
Score = 52.0 bits (123), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTN 316
LN SQ AM R L+ H + ++++ GPPG GKT+ V LL L+R R L C P+N
Sbjct: 377 LNASQRRAMQ---RFLNASHSNALQMVQGPPGCGKTRFVVALLRRLMRDDQRVLVCAPSN 433
Query: 317 VAI 319
A+
Sbjct: 434 KAV 436
>gi|452989270|gb|EME89025.1| hypothetical protein MYCFIDRAFT_55523 [Pseudocercospora fijiensis
CIRAD86]
Length = 1999
Score = 160 bits (405), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 151/281 (53%), Gaps = 11/281 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL-TS 652
+VIDEAAQ E S IPL+ I +++GD QLP V SK + + + +SLF R+ +
Sbjct: 1536 VVIDEAAQCVEMSSLIPLKYGCIK-CIMVGDPKQLPPTVFSKEAAKFQYEQSLFVRMQNN 1594
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYSF 709
HLL+ QYRMHP ISLFP+ FY + DG A ++++ + K L Y F
Sbjct: 1595 FPDEVHLLDTQYRMHPDISLFPSRSFYDGLLKDGPSMAKLRAQPWHKSAL----LAPYRF 1650
Query: 710 INIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
++ G E HS N E++ + +L + IG+++PY +Q+ ++
Sbjct: 1651 FDVAGQHESAPKGHSLVNRAEIAIAELLYDRLRADFPDYDFTSKIGIITPYKSQLRELKN 1710
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
+ +Y + ++ + D FQG E +III S VR + G IGF+ +R+NV LTRA+
Sbjct: 1711 RFASKYGQQIFDFIEFNTTDAFQGRESEIIIFSCVRASPAGGIGFLQDIRRMNVGLTRAK 1770
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNL 869
LW+LG+ +L+ + W LV DA+ R C + D +R L
Sbjct: 1771 SSLWVLGNSESLMRGQ-YWKRLVEDARERDCLTSGDVKRML 1810
>gi|451855806|gb|EMD69097.1| hypothetical protein COCSADRAFT_206223 [Cochliobolus sativus ND90Pr]
Length = 1974
Score = 160 bits (404), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 151/277 (54%), Gaps = 13/277 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DEAAQ E + IPL+ G +L+GD QLP V SK + + +SLF R+
Sbjct: 1515 VIVDEAAQCVEMSALIPLKY-GCAKCILVGDPKQLPPTVFSKEAARFQYEQSLFVRMQK- 1572
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYS 708
NH HLL+ QYRMHP ISLFP+ FY +++LDG A ++ + + + + G Y
Sbjct: 1573 NHPNDVHLLDTQYRMHPEISLFPSQTFYDSRLLDGGDMAGLRKQPWHQSMV----LGPYR 1628
Query: 709 FINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F ++ G + HS N+ E+ +++ ++L + K +G+++PY +Q+ ++
Sbjct: 1629 FFDVKGQQAAAPKGHSLINVAEIKVAMQLYKRLTSDYPDYDFKGKVGIITPYKSQLRELK 1688
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ Y + + D FQG E ++II S VR + G IGF+ +R+NV LTRA
Sbjct: 1689 QSFMQVYGQSIIEDIDFNTTDAFQGRESEVIIFSCVRASPAGGIGFLQDIRRMNVGLTRA 1748
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
+ LW+LG+ +L + W L+ +AK R F + D
Sbjct: 1749 KSSLWVLGNSESLQRGQ-YWNKLIVNAKERNRFTDGD 1784
>gi|224151299|ref|XP_002337084.1| predicted protein [Populus trichocarpa]
gi|222837986|gb|EEE76351.1| predicted protein [Populus trichocarpa]
Length = 153
Score = 160 bits (404), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 103/150 (68%), Gaps = 1/150 (0%)
Query: 82 LEAMRRAPYAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKP 141
++ + RAP+A+++AF E KP+GT Y + +DYWRN SGKE YKTLPGDI++L KP
Sbjct: 1 MDIISRAPFAEMVAFFEAKPHGTLLYDVNIDYWRNRSRGSGKEHYKTLPGDIVILTSAKP 60
Query: 142 EKVSDLRRVGRTWTFVSVTTVPDDEDENKKE-NRYKVKARNNMQVHDKTKKSFFFIYLTN 200
E VSDL+RVG TWTF VT++ DE E+ + VKA+ +++ D +KS LTN
Sbjct: 61 ENVSDLQRVGWTWTFAVVTSITGDETEDAATYTSFTVKAQKEIEISDGLQKSLTVFSLTN 120
Query: 201 ILPNKRIWNSLHMCGNWKVITQVLGTDSVV 230
I +KRIWN+LHM GN +I ++L TDSVV
Sbjct: 121 ITTSKRIWNALHMFGNLNIIKEILCTDSVV 150
>gi|299115307|emb|CBN74123.1| SEN1 protein [Ectocarpus siliculosus]
Length = 1430
Score = 160 bits (404), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 156/300 (52%), Gaps = 21/300 (7%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
+ +V+DEAAQ E S IPL+ +++GD QLPA + SK + A + +SLF RL
Sbjct: 774 FDAVVMDEAAQAVEPSSMIPLKY-NPRAVIMVGDPAQLPATIFSKDAQRANYAQSLFLRL 832
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFI 710
H K +L+ QYRMHP I+ F + +FY + V S+ + + F Y F
Sbjct: 833 QRGGHPKTMLDTQYRMHPDIASFASTRFYSGLLRSAPTVTEASHGQVFHRLPRFAPYLFH 892
Query: 711 NIIGGR-----EDF-IYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVV 764
N+ GGR E + S N EVS + +LQ L + G+ IGV++PY Q+
Sbjct: 893 NVSGGRLKRGGEGYGGAKSLSNPTEVSYITSLLQDLITTFPGTDFNGRIGVIAPYRNQIR 952
Query: 765 AIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC-----------NTGGSIGF 813
A+++ + DG V+V ++DGFQG E+DI+I S VR ++GG IGF
Sbjct: 953 ALQRGMWSTGLRHDG--VEVSTVDGFQGREKDIMIFSCVRAPELQRSGDSGSSSGGGIGF 1010
Query: 814 ISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKAR 873
+ +R+NVA+TRA+ +WI+G L S W L+ D+K R F ++ + R
Sbjct: 1011 LDDWRRLNVAITRAKFAMWIVGHAGVLKQSTD-WRELINDSKKRNAFIDSSNPGATSSGR 1069
Score = 42.0 bits (97), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC 307
N SQV AM R++ G SG L+ GPPGTGKT+T+ ++ LL C
Sbjct: 518 FNSSQVQAM----RKVVDGSPSGFTLLQGPPGTGKTRTIMGIVGVLLAGAC 564
>gi|328871485|gb|EGG19855.1| hypothetical protein DFA_06958 [Dictyostelium fasciculatum]
Length = 1406
Score = 159 bits (403), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/245 (39%), Positives = 145/245 (59%), Gaps = 11/245 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E + IPL L + +LIGD QLP V SKIS G+ SLFERL++
Sbjct: 667 IIIDESTQSCEPSTLIPLLLNPNSKVILIGDPKQLPPTVFSKISSRHGYNVSLFERLSNY 726
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
H+L+ QYRMHPSIS FP+ +FY++++ DG NV Y + ++G +F NI
Sbjct: 727 -LPVHMLDTQYRMHPSISKFPSQRFYQSKLKDGENV--VKYTNSFYNNAKYGPINFYNIP 783
Query: 714 GGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGF 772
+E +S +NI+E V +L+KL + + K K+ +G+++PY Q + + G
Sbjct: 784 ESQEVSENGNSLKNILESKYVFVLLKKLVQEYPEVK-KMIVGIITPYKLQKKELLEARGA 842
Query: 773 EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLW 832
E D V V ++DGFQG E+DIII S VR IGF+S +R+NV +TRAR ++
Sbjct: 843 FNEKMD---VVVNTVDGFQGAEKDIIIFSCVR---NKRIGFLSDIRRINVGITRARKAIY 896
Query: 833 ILGSE 837
++G +
Sbjct: 897 VVGKQ 901
Score = 45.4 bits (106), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 24/144 (16%)
Query: 188 KTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDE 247
KTK F+ + N++ +R S+ + ++ VL + +++R + + +K +
Sbjct: 465 KTKTEFYVSKVANLITFERELKSIKQFTSHRLSKLVLSPRTFIEDRKNM--IVKKQSF-- 520
Query: 248 KFGPSFS--STLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI 305
PS LN SQ+ A+ + + + LI GPPGTGKT ++L LLRI
Sbjct: 521 -IIPSHLDLGNLNPSQLSAIQKSMIQ------DELTLIQGPPGTGKT----TIILNLLRI 569
Query: 306 -------KCRTLACTPTNVAITEL 322
K L C P+N A+ E+
Sbjct: 570 FHSILGEKETILVCAPSNTAVDEV 593
>gi|452003720|gb|EMD96177.1| hypothetical protein COCHEDRAFT_1201038 [Cochliobolus heterostrophus
C5]
Length = 1973
Score = 159 bits (403), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 150/277 (54%), Gaps = 13/277 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DEAAQ E + IPL+ G +L+GD QLP V SK + + +SLF R+
Sbjct: 1514 VIVDEAAQCVEMSALIPLKY-GCAKCILVGDPKQLPPTVFSKEAARFQYEQSLFVRMQK- 1571
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYS 708
NH HLL+ QYRMHP ISLFP+ FY ++LDG A ++ + + + + G Y
Sbjct: 1572 NHPDDVHLLDTQYRMHPEISLFPSQTFYDGRLLDGGDMAGLRKQPWHQSMV----LGPYR 1627
Query: 709 FINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F ++ G + HS N+ E+ +++ ++L + K +G+++PY +Q+ ++
Sbjct: 1628 FFDVKGQQAAAPKGHSLINVAEIKVAMQLYKRLTSDYPDYDFKGKVGIITPYKSQLRELK 1687
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ Y + + D FQG E ++II S VR + G IGF+ +R+NV LTRA
Sbjct: 1688 QSFMQVYGQSIIEDIDFNTTDAFQGRESEVIIFSCVRASPAGGIGFLQDIRRMNVGLTRA 1747
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
+ LW+LG+ +L + W L+ +AK R F + D
Sbjct: 1748 KSSLWVLGNSESLQRGQ-YWNKLIVNAKERNRFTDGD 1783
>gi|303318509|ref|XP_003069254.1| Zinc knuckle domain containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|240108940|gb|EER27109.1| Zinc knuckle domain containing protein [Coccidioides posadasii C735
delta SOWgp]
Length = 2141
Score = 159 bits (403), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 154/274 (56%), Gaps = 8/274 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + +L+GD QLP V SK + + +SLF R+ +
Sbjct: 1541 VIIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSKEASRFQYEQSLFVRMQA- 1598
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH + HLL+ QYRMHP IS FP+ FY ++ DG ++ +K + + + G Y F +
Sbjct: 1599 NHPQDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPSM-AKLRIRPWHSTELLGPYRFFD 1657
Query: 712 IIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G HS N+ E+ +++ +L + + IG+++PY Q+ +++
Sbjct: 1658 VQGMHASAPKGHSLVNMAELRVAMRLYDRLVQDFPTYDFAGKIGIITPYKGQLRELKQHF 1717
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
+Y N V+ + D FQG E ++II S VR + G IGF++ +R+NV LTRA+
Sbjct: 1718 ANKYGNAIFKAVEFNTTDAFQGRECEVIIFSCVRASNHG-IGFLADIRRMNVGLTRAKSS 1776
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
LW+LG+ ++L E W L+ DA+ RQ + + D
Sbjct: 1777 LWVLGNSQSLARGE-FWRGLINDARERQLYTDGD 1809
Score = 42.0 bits (97), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 73/177 (41%), Gaps = 43/177 (24%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL-------RIK--------CRTLA-----CTPTNVAITE 321
LI GPPG+GKTKT+ L+ LL RI RTLA C P+N A+ E
Sbjct: 1315 LIQGPPGSGKTKTIVALVGALLTPTLSEHRIAPPRPGDKTARTLAKKLLVCAPSNAAVDE 1374
Query: 322 LASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECF 381
L R + VK R + + +L G D + N ++ L+ R+
Sbjct: 1375 LVMRFKEGVKTLQGRAQKIS--------VLRLGRSDAINTN--VLDVTLDERVNAKLSEI 1424
Query: 382 APLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGE 438
+G S+ +D ++++ +++ER D +CR + +G E
Sbjct: 1425 GQKNGSERDLHSLYTEHKDSSNKFN----EIRERMD---------QCRAKAQGLPAE 1468
>gi|444322031|ref|XP_004181671.1| hypothetical protein TBLA_0G02100 [Tetrapisispora blattae CBS 6284]
gi|387514716|emb|CCH62152.1| hypothetical protein TBLA_0G02100 [Tetrapisispora blattae CBS 6284]
Length = 2235
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 158/277 (57%), Gaps = 14/277 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E S IPL+ G +++GD QLP V S + + + +SLF R+
Sbjct: 1547 VIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPPTVLSGAASDFNYNQSLFVRMEK- 1604
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
N +LLN+QYRMHP IS FP+ +FY+ ++ DG +++ K + + + G Y F +I+
Sbjct: 1605 NTKPYLLNVQYRMHPLISRFPSKEFYKRELKDGPDME-KITARPWHSLEALGPYKFFDIV 1663
Query: 714 GGRED--FIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS----IGVVSPYTAQVVAIR 767
G+++ S N EV I+++ L + + ++KV IGV+SPY Q++ ++
Sbjct: 1664 SGKQEQNIKTMSYVNPEEVRVAIELIDYLLRHF---EKKVDFTGKIGVISPYREQMMKMK 1720
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGS-IGFISKPQRVNVALTR 826
+ + V +IDGFQG E++II++S VR + + +GF+ +R+NVALTR
Sbjct: 1721 RDFNSYFGGVISTYVDFNTIDGFQGQEKEIILLSCVRADASKTGVGFLKDFRRMNVALTR 1780
Query: 827 ARHCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
A+ +WILG ++L ++ +W L+ DA R +A
Sbjct: 1781 AKSSMWILGHHKSLYKNK-LWKHLIEDAHKRNALTSA 1816
>gi|410074371|ref|XP_003954768.1| hypothetical protein KAFR_0A01950 [Kazachstania africana CBS 2517]
gi|372461350|emb|CCF55633.1| hypothetical protein KAFR_0A01950 [Kazachstania africana CBS 2517]
Length = 995
Score = 159 bits (401), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/380 (31%), Positives = 186/380 (48%), Gaps = 34/380 (8%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
++IDE+ Q E E IP+ + G +L+GD QL P ++E K +D AG +SLFERL S
Sbjct: 581 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAAD-AGLRQSLFERLIS 638
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L H L +QYRM+P++S FP+ FY + +G ++ ++ G
Sbjct: 639 LGHVPIRLEVQYRMNPNLSEFPSNMFYEGSLQNGVTIEQRTVSNSTFPWPIHGVPMMFWA 698
Query: 713 IGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
GRE+ + S N +E +I+ +L+K V +Q IGV++PY Q I
Sbjct: 699 NYGREEISANGTSYLNRIEAMNCERIITRLFKDGVKPEQ---IGVITPYEGQRAYI---- 751
Query: 771 GFEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
+Y +G V+V S+D FQG E+D II+S VR N +IGF+ P+R+NV
Sbjct: 752 -LQYMQMNGVLDKNLYVKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVG 810
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEI 883
LTRA++ L ILG+ R+L S +W L+ + + C + NL + ++++K
Sbjct: 811 LTRAKYGLIILGNPRSL-SRNLLWNHLLIHFREKGCLVEGPLD-NLQLSTVQLTKPQPNR 868
Query: 884 GAESLTSTSQGGKKEEFEFEFVKAFRSINLIHKVLNSLGRFDELLMLENGSGNFMEAANM 943
+ S+ K +F+F+F + ++L FD M+ G G N
Sbjct: 869 NRQQNRSSF----KAQFDFDFDSSMGG-------FSNLQEFDTQSMMSFGGGAMENGINN 917
Query: 944 AVLEGDIFLATDLLQKAWNF 963
D F ++ L WNF
Sbjct: 918 VFPPNDGF-SSYLQNNYWNF 936
Score = 55.1 bits (131), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 13/90 (14%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRT 309
P F+ LN+SQ A+ L+R + LI GPPGTGKT T + ++ L +I K R
Sbjct: 416 PQFTK-LNDSQSNAVKKVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRI 467
Query: 310 LACTPTNVAITELASRV----LKLVKESYK 335
L C P+NVA+ LA+++ LK+V+ + K
Sbjct: 468 LVCAPSNVAVDHLAAKLRDLGLKVVRLTAK 497
>gi|440800551|gb|ELR21587.1| DNAbinding protein SMUBP-2, putative [Acanthamoeba castellanii str.
Neff]
Length = 799
Score = 159 bits (401), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 147/270 (54%), Gaps = 11/270 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E + IPL+ +L+GD QLPA V S+ + + +SLF+RL
Sbjct: 528 VVIDEAAQAVEMATLIPLKY-DCRRCILVGDPNQLPATVISQAASSFLYAQSLFQRLQKA 586
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANV---KSKSYEKQYLTGTEFGTYSFI 710
H +L++QYRMHP I FP+ FY N++ DG N+ +S Y + Y F + F
Sbjct: 587 GHPVIMLDVQYRMHPLIREFPSKHFYDNRLTDGPNIDTSQSGLYNQPYHADPSFQPFLFY 646
Query: 711 NIIGGRED--FIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
++ G E+ S N E + +++ Q L + + GV++PY Q +++
Sbjct: 647 DLCKGVEEQGARGQSYVNPAEATFCLQLFQDLCSRF----PHIESGVITPYKQQYFLLQR 702
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
+ + + +IDGFQG E+D+II S VR + IGF+S +R+NVALTRA+
Sbjct: 703 TFAAALDKATYSAIDINTIDGFQGREKDVIIFSCVRAHETKGIGFLSDIRRMNVALTRAK 762
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQ 858
L+++G L+++ WGALV AK +Q
Sbjct: 763 FGLFVVGKSTALLNNPH-WGALVNHAKEKQ 791
>gi|66804901|ref|XP_636183.1| hypothetical protein DDB_G0289529 [Dictyostelium discoideum AX4]
gi|60464558|gb|EAL62696.1| hypothetical protein DDB_G0289529 [Dictyostelium discoideum AX4]
Length = 1677
Score = 159 bits (401), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 153/282 (54%), Gaps = 8/282 (2%)
Query: 568 KRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQ 627
K AS+ FST + S E + ++IDE+ Q E S IPL L + +L+GD Q
Sbjct: 1305 KSASIVFSTLAGSGSKAIFENFSPDIVLIDESTQSSEPTSIIPLSLGSVKKLILVGDPVQ 1364
Query: 628 LPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGA 687
LP + SK + G SLFERL + LN QYRMHP S F + +FY + DG
Sbjct: 1365 LPPTIFSKQGADCGLKISLFERLAK-SIDVQFLNTQYRMHPVTSKFISEEFYNGTLKDGE 1423
Query: 688 NVKSKSYEK-QYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVG 746
NV SY ++ FG F ++ + I S N E+ V ++++L + +
Sbjct: 1424 NVSIDSYNNCKFHFDPSFGPMKFFDLPKSNQKVIKKSIMNQDEIDKVFTLIKELIEKYPE 1483
Query: 747 SKQKVSIGVVSPYTAQVVAIRKKIG-FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC 805
K K+S G+++PY Q+ I++++ E+ N + V +IDG QG E+DIII+S VR
Sbjct: 1484 CK-KLSFGIITPYKLQMNQIKEQLNRSEHHN---LNISVSTIDGVQGSEKDIIIMSCVRS 1539
Query: 806 NTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIW 847
IGF+S +R+NVALTRA+ L+++G+ + L + ++ W
Sbjct: 1540 IEKFGIGFLSDRRRINVALTRAKLGLYVIGTYKVL-AKDNTW 1580
Score = 63.9 bits (154), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 12/87 (13%)
Query: 248 KFGPSFSST----LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL 303
KF P+ + LNESQ+ A+ + L SG+ LI GPPGTGKT T++ LL LL
Sbjct: 1180 KFPPTLETICKEKLNESQLNAIKSSLVE------SGITLIQGPPGTGKTTTINYLLSVLL 1233
Query: 304 RI--KCRTLACTPTNVAITELASRVLK 328
I K + L C P++ ++ E+A R LK
Sbjct: 1234 AIDKKFKILVCGPSHASVDEVAKRCLK 1260
>gi|380485224|emb|CCF39497.1| helicase SEN1 [Colletotrichum higginsianum]
Length = 696
Score = 159 bits (401), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 153/276 (55%), Gaps = 10/276 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G +L+GD QLP V S+ + G+ +SLF R+
Sbjct: 190 VIIDEAAQCVELSALIPLKY-GCTKCILVGDPKQLPPTVLSQSAARFGYDQSLFVRMQQ- 247
Query: 654 NHSKH--LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH H LL+ QYRMHP ISLFP+ +FY +++DG ++ + + + + G Y F +
Sbjct: 248 NHPDHVHLLDRQYRMHPEISLFPSTEFYEGKLVDGEDMSALRRQPWHASAL-LGPYRFFD 306
Query: 712 IIGGR-EDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKV--SIGVVSPYTAQVVAIRK 768
+ G + + S N E+ +++ ++ +KA G + IG+++PY AQ+ ++
Sbjct: 307 VEGTQSKGSKGRSLVNHAELRVAMQLYER-FKADFGRNYDIRGKIGIITPYKAQLQELKW 365
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
+ ++ ++ + D FQG E +III S VR + G IGF+ +R+NV LTRA+
Sbjct: 366 QFSRQFGEAITDDIEFNTTDAFQGRECEIIIFSCVRADPTGGIGFVKDIRRMNVGLTRAK 425
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
LWILG R L+ E W L+ +AK R + D
Sbjct: 426 SSLWILGDSRALVQGE-FWNKLITNAKQRSLYTKGD 460
>gi|255726544|ref|XP_002548198.1| hypothetical protein CTRG_02495 [Candida tropicalis MYA-3404]
gi|240134122|gb|EER33677.1| hypothetical protein CTRG_02495 [Candida tropicalis MYA-3404]
Length = 2061
Score = 159 bits (401), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 157/275 (57%), Gaps = 11/275 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E + IPL+ G +++GD QLP V S+ + + +SLF R+
Sbjct: 1572 VIIDEACQCLELSAIIPLRY-GCKKCIMVGDPNQLPPTVLSQAAASYNYEQSLFVRMQKN 1630
Query: 654 N-HSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANV---KSKSYEKQYLTGTEFGTYSF 709
N S ++L++QYRM+P IS FP+ +FY +++ DG + ++ + K Y F
Sbjct: 1631 NPESVYMLDVQYRMNPMISKFPSAEFYDSKLKDGEGMLELNTRPWHKD----DPLTPYRF 1686
Query: 710 INIIGG-REDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
+I G +++ + S N E +++ +KL + + +G++SPY QV I++
Sbjct: 1687 FDISGKHQKNALTQSLFNRDEARVALELTEKLMQYLPDGEFSGKVGIISPYKEQVNTIKR 1746
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
+ ++ + ++DGFQG E++III+S VR + GS+GF+S +R+NVALTRA+
Sbjct: 1747 EFIAKFGRVILNEIDFNTVDGFQGQEKEIIIMSCVRASESGSVGFLSDFRRMNVALTRAK 1806
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
LWILG+E +L +++W L+ DA R+C A
Sbjct: 1807 TTLWILGNEDSL-RRDAVWNRLLADATDRKCVSKA 1840
>gi|242083582|ref|XP_002442216.1| hypothetical protein SORBIDRAFT_08g016446 [Sorghum bicolor]
gi|241942909|gb|EES16054.1| hypothetical protein SORBIDRAFT_08g016446 [Sorghum bicolor]
Length = 282
Score = 159 bits (401), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/292 (37%), Positives = 140/292 (47%), Gaps = 58/292 (19%)
Query: 592 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT 651
+ LVIDEAA LKE ES IPL + G H VLIGD+ QL ++ +S+ +LFERL
Sbjct: 11 DILVIDEAAYLKECESMIPLSINGKKHLVLIGDDLQLQSVAKSQ---RPSMDEALFERLC 67
Query: 652 SLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
+ KHLLN+QYRMH IS P FY I+D S + G FG YSFIN
Sbjct: 68 EIGWHKHLLNVQYRMHLDISRLPMKVFYDETIIDATEKTS----AKIFIGDIFGNYSFIN 123
Query: 712 IIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
+ E S +N+VE + I+ KL K
Sbjct: 124 VEYAIEHQTGQSVQNVVEAAVAATIVSKLSK----------------------------- 154
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
G E+DIII+STVR N G IGF+ R NVALTRAR CL
Sbjct: 155 --------------------GDEKDIIILSTVRNNKFGKIGFLDSCGRANVALTRARDCL 194
Query: 832 WILGSER-TLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVE 882
WILG E+ + + S S+ A + +AK R CFF+A + L A +K + E
Sbjct: 195 WILGHEQYSHLDSISMVLA-IQNAKGRSCFFDARADLELDTAESAEAKSVEE 245
>gi|413933077|gb|AFW67628.1| hypothetical protein ZEAMMB73_310303 [Zea mays]
Length = 824
Score = 159 bits (401), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 164/327 (50%), Gaps = 21/327 (6%)
Query: 589 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
+ + ++IDEAAQ E + IPL + G L+GD QLPA V S+ + + G+G SLF+
Sbjct: 475 RAFDVVIIDEAAQAVEPATLIPL-IHGCRQIFLVGDPVQLPATVISQTAQKLGYGTSLFK 533
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYS 708
R + +L IQYRMHP IS FP+ +FY + DG + K Y + FG +
Sbjct: 534 RFQAAGFPVQMLKIQYRMHPEISTFPSKEFYEGVLQDGEGLSRKRPWHSY---SCFGPFC 590
Query: 709 FINIIG-GREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F ++ G + S N EV + + +L + K +GV+SPY QV ++
Sbjct: 591 FFDVDGIESQPSGSGSWVNQDEVEFITLLYHQLALRYPELKSSPEVGVISPYRHQVKLLK 650
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ ++ + V ++DGFQG E++I+I S VRCN IGF+S +R+NVA+TRA
Sbjct: 651 DSFRSTFGDQSRELIDVSTVDGFQGREKEIVIFSCVRCNKEQKIGFVSDFRRMNVAITRA 710
Query: 828 -------RHCLWILGSERTLISSESIWGALVCDAKARQCFFNADE-------ERNLAKAR 873
R + ++GS TL + W LV AK R C F + E NL +
Sbjct: 711 KSAVLKGRPGVVVVGSASTL-KQDKHWNNLVESAKERNCLFKVPKPLTAFFAEDNLKTMK 769
Query: 874 LEVSKELVEIGAESLTSTSQGGKKEEF 900
+E + E+ A L +Q ++E
Sbjct: 770 VE-RRPPPELNARVLEEINQEVVRQEL 795
>gi|119181373|ref|XP_001241901.1| hypothetical protein CIMG_05797 [Coccidioides immitis RS]
Length = 2066
Score = 159 bits (401), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 153/277 (55%), Gaps = 14/277 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + +L+GD QLP V SK + + +SLF R+ +
Sbjct: 1466 VIIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSKEASRFQYEQSLFVRMQA- 1523
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYS 708
NH + HLL+ QYRMHP IS FP+ FY ++ DG A ++ + + L G Y
Sbjct: 1524 NHPQDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPAMAKLRIRPWHNTEL----LGPYR 1579
Query: 709 FINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F ++ G HS N+ E+ +++ +L + + IG+++PY Q+ ++
Sbjct: 1580 FFDVQGMHASAPKGHSLVNMAELRVAMRLYDRLVQDFPTYDFAGKIGIITPYKGQLRELK 1639
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ +Y N V+ + D FQG E ++II S VR + G IGF++ +R+NV LTRA
Sbjct: 1640 QHFANKYGNAIFKAVEFNTTDAFQGRECEVIIFSCVRASNHG-IGFLADIRRMNVGLTRA 1698
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
+ LW+LG+ ++L E W L+ DA+ RQ + + D
Sbjct: 1699 KSSLWVLGNSQSLARGE-FWRGLINDARERQLYTDGD 1734
Score = 41.6 bits (96), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 95/241 (39%), Gaps = 48/241 (19%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL-------RIK--------CRTLA-----CTPTNVAITE 321
LI GPPG+GKTKT+ L+ LL RI RTLA C P+N A+ E
Sbjct: 1240 LIQGPPGSGKTKTIVALVGALLTPTLSEHRIAPPRPGDKTARTLAKKLLVCAPSNAAVDE 1299
Query: 322 LASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECF 381
L R + VK R + + +L G D + N ++ L+ R+
Sbjct: 1300 LVMRFKEGVKTLQGRAQKIS--------VLRLGRSDAINTN--VLDVTLDERVNAKLSEI 1349
Query: 382 APLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERK- 440
+G S+ +D ++++ +++ER D +CR + + E +
Sbjct: 1350 GQKNGSERDLQSLYTEHKDTSNKFN----EIRERMD---------QCRAKAQALPAELER 1396
Query: 441 --PFLKYVRERFKCAVVSLR--NCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLF 496
LK + + A+ S R N L + I + E + + L G+ +F
Sbjct: 1397 EFDLLKKKKAQLSQAIDSARDKNQAAARNAELTRRKIQQEIIDEAHVICATLSGSGHEMF 1456
Query: 497 Q 497
Q
Sbjct: 1457 Q 1457
>gi|336264808|ref|XP_003347180.1| hypothetical protein SMAC_05480 [Sordaria macrospora k-hell]
gi|380093874|emb|CCC08839.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 2146
Score = 159 bits (401), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/270 (35%), Positives = 148/270 (54%), Gaps = 7/270 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + +L+GD QLP V S+ + G+ +SLF R+
Sbjct: 1569 VIIDEAAQCVELSALIPLKY-GCSKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQK- 1626
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
+H K HLL+ QYRMHP IS FP FY + DG + +KS + + G Y F +
Sbjct: 1627 SHEKDVHLLDTQYRMHPEISSFPREAFYEGLLQDGDGM-AKSRLQPWHRSALLGPYRFFD 1685
Query: 712 IIGGREDFIYH-SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G +E + S N E+ +++ ++ + K IG+++PY AQ+ +R +
Sbjct: 1686 VRGLQERGPKNQSLVNEEELKVAMQLYRRFKADYGDVDLKGKIGIITPYKAQLHRLRSQF 1745
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
+ + ++ + D FQG E +III S VR + G IGF++ +R+NV LTRAR
Sbjct: 1746 AQRFGDAITDEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSS 1805
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCF 860
LWILG R L+ E W L+ D+K R +
Sbjct: 1806 LWILGDSRALMQGE-FWAKLIEDSKKRDRY 1834
>gi|149237651|ref|XP_001524702.1| ATP-dependent helicase NAM7 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451299|gb|EDK45555.1| ATP-dependent helicase NAM7 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 977
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 169/326 (51%), Gaps = 19/326 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IP+ + G +L+GD QL ++ + + +AG +SLFERL L
Sbjct: 570 VLIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDRKAADAGLKQSLFERLVFL 628
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
H L +QYRMHP +S FP+ FY + +G K + E+ T
Sbjct: 629 GHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSKDRLVEEAMFPWPVLDTPMMFWAN 688
Query: 714 GGREDFIY--HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
GRE+ +S N VE V +I+ +L+K + +Q IGV++PY Q + + +
Sbjct: 689 YGREELSGSGNSYLNRVEAMNVERIITRLFKDGIKPEQ---IGVITPYEGQRAYLVQFMS 745
Query: 772 FE---YENKDGF-TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ +D + V++ S+D FQG E+D II+S VR N SIGF+S P+R+NVALTRA
Sbjct: 746 INSTILDKRDQYLEVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVALTRA 805
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAES 887
++ L ILG+ R L ++ +W L+ + + C + + L++S +V++ +
Sbjct: 806 KYGLLILGNPRALCRNK-LWNHLLIHFREKGCLVDGPLD------NLQLS--MVQLNNYA 856
Query: 888 LTSTSQGGKKEEFEFEFVKAFRSINL 913
+ G KK F AF S L
Sbjct: 857 PRNVKPGQKKVPFAAPQTSAFSSATL 882
Score = 51.6 bits (122), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 12/94 (12%)
Query: 247 EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI- 305
+KF + LN SQ A+ + L+R + LI GPPGTGKT T + ++ L R
Sbjct: 399 KKFSHPKLTELNISQTNAVRSVLQR-------PLSLIQGPPGTGKTVTSATIIYHLSRSN 451
Query: 306 KCRTLACTPTNVAITELASRV----LKLVKESYK 335
K + L C P+NVA+ LA+++ LK+V+ + K
Sbjct: 452 KEKILVCAPSNVAVDHLAAKLDTLGLKVVRLTAK 485
>gi|384484388|gb|EIE76568.1| hypothetical protein RO3G_01272 [Rhizopus delemar RA 99-880]
Length = 1809
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/305 (35%), Positives = 165/305 (54%), Gaps = 14/305 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL-TS 652
+++DEAAQ E S IPL+ +L+GD QLP V S ++ + + +SLF RL +
Sbjct: 1372 VIVDEAAQSIEISSLIPLKF-DTQRCILVGDPNQLPPTVMSTVAAKYDYQQSLFMRLEKT 1430
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ +LL+IQYRMHP IS FP+ FY++++ DG + K + EF Y F ++
Sbjct: 1431 VGKEVNLLSIQYRMHPEISTFPSKLFYQSRLQDGPGM-DKISSAIWHALPEFPPYCFYDV 1489
Query: 713 IGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E S N+ E A + ++ L K IGV++PY QV ++ +
Sbjct: 1490 RDGQEKMGRGKSIFNVAEADAAVCLVDLLLTKLPTIKFASKIGVITPYKQQVGQLKARFQ 1549
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
+ N + ++DGFQG E++I+I S VR +G IGF++ +R+NV LTRA+ L
Sbjct: 1550 KRFGNGIVDAIDFNTVDGFQGQEKEIVIFSCVRAGSGRGIGFLADMRRMNVGLTRAKCSL 1609
Query: 832 WILGSERTLISSESIWGALVCDAK----ARQCFFNADEER-NLAKARLEVSKELVEIGAE 886
++LG R+L SE WG LV DA+ R+C + + R N +K V + + E A
Sbjct: 1610 FVLGHARSLSRSE-YWGDLVRDAEKRSLVRECGYPYFQHRMNGSK----VPQNIYEKDAA 1664
Query: 887 SLTST 891
+L ST
Sbjct: 1665 ALPST 1669
Score = 54.7 bits (130), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 8/73 (10%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK---CRTLACT 313
+NE Q A+ + +++ + G LI GPPGTGKTKT+ L+++LL + + L C
Sbjct: 1141 VNEPQAEAIASAIQK-----KKGFSLIQGPPGTGKTKTILALIVSLLDQRQGYSKLLVCA 1195
Query: 314 PTNVAITELASRV 326
P+N A+ E+ R+
Sbjct: 1196 PSNAAVDEITKRL 1208
>gi|392864810|gb|EAS30536.2| tRNA-splicing endonuclease [Coccidioides immitis RS]
Length = 2141
Score = 158 bits (400), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 153/277 (55%), Gaps = 14/277 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + +L+GD QLP V SK + + +SLF R+ +
Sbjct: 1541 VIIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSKEASRFQYEQSLFVRMQA- 1598
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYS 708
NH + HLL+ QYRMHP IS FP+ FY ++ DG A ++ + + L G Y
Sbjct: 1599 NHPQDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPAMAKLRIRPWHNTEL----LGPYR 1654
Query: 709 FINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F ++ G HS N+ E+ +++ +L + + IG+++PY Q+ ++
Sbjct: 1655 FFDVQGMHASAPKGHSLVNMAELRVAMRLYDRLVQDFPTYDFAGKIGIITPYKGQLRELK 1714
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ +Y N V+ + D FQG E ++II S VR + G IGF++ +R+NV LTRA
Sbjct: 1715 QHFANKYGNAIFKAVEFNTTDAFQGRECEVIIFSCVRASNHG-IGFLADIRRMNVGLTRA 1773
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
+ LW+LG+ ++L E W L+ DA+ RQ + + D
Sbjct: 1774 KSSLWVLGNSQSLARGE-FWRGLINDARERQLYTDGD 1809
Score = 41.6 bits (96), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 44/101 (43%), Gaps = 28/101 (27%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL-------RIK--------CRTLA-----CTPTNVAITE 321
LI GPPG+GKTKT+ L+ LL RI RTLA C P+N A+ E
Sbjct: 1315 LIQGPPGSGKTKTIVALVGALLTPTLSEHRIAPPRPGDKTARTLAKKLLVCAPSNAAVDE 1374
Query: 322 LASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVN 362
L R + VK R + + +L G D + N
Sbjct: 1375 LVMRFKEGVKTLQGRAQKIS--------VLRLGRSDAINTN 1407
>gi|449664168|ref|XP_002168656.2| PREDICTED: uncharacterized protein LOC100204258 [Hydra
magnipapillata]
Length = 3199
Score = 158 bits (400), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/299 (37%), Positives = 155/299 (51%), Gaps = 37/299 (12%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P ++IDEA Q E ++ IPLQ G + VL+GD QLPA V S+ + G+SLFER
Sbjct: 1427 PFRCVIIDEAGQCTEPDALIPLQY-GSSKLVLVGDPAQLPATVISQRAGRFNLGQSLFER 1485
Query: 650 LTS---LNHSKH-----LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTG 701
L +N LLN QYRM P I FPN +FY N++ KS E
Sbjct: 1486 LYKGIIINSEAGVRPAILLNYQYRMAPEICWFPNKRFYNNEL--------KSNEALIKKK 1537
Query: 702 TEFGTYSFINIIGGREDFI-YHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYT 760
++ Y F+N+ RED N VE +I I +K+ + + I V++PY
Sbjct: 1538 SDLKPYVFLNLDESREDKTRMGGIHNPVEREHIIAICEKIVTEKNANVNE--IAVITPYR 1595
Query: 761 AQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC-NTGGSIGFISKPQR 819
Q I++++ + +G ++V +IDGFQG E+ I+I S VR N SIGF+S PQR
Sbjct: 1596 YQASLIKQELNKKLAQLEG--IEVDTIDGFQGREKRIVIFSCVRASNHQESIGFLSNPQR 1653
Query: 820 VNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR-------------QCFFNADE 865
+NVALTRA+ L IL + ++ E W ALV DAK+R QC FN +
Sbjct: 1654 MNVALTRAKDVLIILANCNSIEIDED-WKALVDDAKSRGLLFTVQNCNDTLQCIFNTSD 1711
>gi|326436499|gb|EGD82069.1| ATP-dependent helicase NAM7 [Salpingoeca sp. ATCC 50818]
Length = 1192
Score = 158 bits (399), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 148/294 (50%), Gaps = 9/294 (3%)
Query: 562 LEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVL 621
+ED ++A + T + V KP +++DEA Q E E IPL L G N +L
Sbjct: 719 IEDIFLRKADVICCTCAGGGDRRIVAGKPYRTVLVDEATQATEPEILIPLVL-GANQVIL 777
Query: 622 IGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRN 681
+GD CQL +V K + AG SLFERL L +QYRMHP++S FP+ FY
Sbjct: 778 VGDHCQLGPVVMCKKAANAGLAHSLFERLVVHGVRPVRLQVQYRMHPALSEFPSNTFYEG 837
Query: 682 QILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIY--HSCRNIVEVSAVIKILQK 739
+ +G + GRE+ S N E + V KI+ +
Sbjct: 838 SLQNGVTAAEREQPAVDFPWPNPEVPMLFYASMGREEMAASGSSYLNRTEAANVEKIVTR 897
Query: 740 LYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGF--TVKVKSIDGFQGGEEDI 797
+A + Q IG+++PY Q I + + F + F ++V S+D FQG E+D
Sbjct: 898 FMRAGITPDQ---IGIITPYEGQRAHIVQYMNFHGAARRSFYEALEVASVDSFQGREKDY 954
Query: 798 IIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
II+S R N IGF++ P+R+NVALTRA++ L ++G+ R L S +++W L+
Sbjct: 955 IILSCTRSNDHQGIGFLNDPRRLNVALTRAKYGLILVGNPRAL-SKQALWHNLL 1007
Score = 54.3 bits (129), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 11/83 (13%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTN 316
LN SQ+ A+ L++ + LI GPPGTGKT T + L+ L++ + + L C P+N
Sbjct: 589 LNHSQLNAIRTVLQQ-------PLSLIQGPPGTGKTVTSATLVYHLVQQRGQVLVCAPSN 641
Query: 317 VAITELASRV----LKLVKESYK 335
+A+ LA R+ +K+V+ + K
Sbjct: 642 IAVEHLAQRIHLTGVKVVRVAAK 664
>gi|397569654|gb|EJK46882.1| hypothetical protein THAOC_34429 [Thalassiosira oceanica]
Length = 1051
Score = 158 bits (399), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/250 (37%), Positives = 130/250 (52%), Gaps = 25/250 (10%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+V+DEAAQL G HA+L+GD QLPA + + F RSLF+RL
Sbjct: 744 VVVDEAAQL------------GSKHAILVGDPQQLPATIFNVSGKTTKFDRSLFQRLEEA 791
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK--QYLTGTEFGTYSFIN 711
H HLL+ QYRMHP ISLFP FY ++LDG NVK Y + FG +
Sbjct: 792 GHEVHLLDTQYRMHPMISLFPRRIFYDGKLLDGPNVKHPEYGSPLKRTIFRSFGAFQPFT 851
Query: 712 IIG--GREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKK 769
I+ ED S N E + + Q L A G + + V++PY+ Q +R+
Sbjct: 852 ILDLESTEDRAGTSMANTAEAQLALHLFQNLRSA-TGGQLGSRVAVITPYSQQAALLRRT 910
Query: 770 ----IGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALT 825
+G EYE +V++ S+D FQG E I+I S VR IGF++ +R+NVALT
Sbjct: 911 FSSGLGSEYER----SVEISSVDAFQGREAHIVIFSCVRAAGSKGIGFLADVRRMNVALT 966
Query: 826 RARHCLWILG 835
RA+H L+++
Sbjct: 967 RAKHFLFVIA 976
>gi|302789261|ref|XP_002976399.1| hypothetical protein SELMODRAFT_30768 [Selaginella moellendorffii]
gi|300156029|gb|EFJ22659.1| hypothetical protein SELMODRAFT_30768 [Selaginella moellendorffii]
Length = 766
Score = 158 bits (399), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 158/308 (51%), Gaps = 20/308 (6%)
Query: 561 VLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAV 620
+LE+ ++L FS +S ++ + + +VIDEAAQ E + +PL G A
Sbjct: 408 ILEEAAIVCSTLSFSGSSVFSRMK----RGFDVVVIDEAAQAVEPSTLVPLT-HGCKQAF 462
Query: 621 LIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYR 680
L+GD QLPA V S + + G+G S+F+R + +LN QYRMHP I FP+ +FY
Sbjct: 463 LVGDPIQLPATVLSTEAVKHGYGTSMFKRFQKAGYPVQMLNTQYRMHPQIRDFPSKEFYG 522
Query: 681 NQILDGANVKSKSYEKQYLTGTEFGTYSFINIIG------GREDFIYHSCRNIVEVSAVI 734
+ DGA V+ ++ + + FG ++F +I G G +I N E V+
Sbjct: 523 EALEDGAEVEQQT-SRAWHEYCCFGPFAFFDIEGRETQPPGSGSYI-----NSDEAEFVL 576
Query: 735 KILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFT-VKVKSIDGFQGG 793
+ + L + K + V+SPY QV +R + E KD + + ++DGFQG
Sbjct: 577 VLYRHLIALYPELKGGPHVAVISPYKYQVTTLRTRFA-EVLGKDAARLIDINTVDGFQGR 635
Query: 794 EEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCD 853
E+DI I S VR N IGF+S +R+NV LTRAR + ++G L E WG L+
Sbjct: 636 EKDIAIFSCVRANKSKGIGFVSDFRRMNVGLTRARASMLVVGCAAALRQDEH-WGNLIKH 694
Query: 854 AKARQCFF 861
A+ R F
Sbjct: 695 AQQRNRMF 702
>gi|242083574|ref|XP_002442212.1| hypothetical protein SORBIDRAFT_08g016427 [Sorghum bicolor]
gi|241942905|gb|EES16050.1| hypothetical protein SORBIDRAFT_08g016427 [Sorghum bicolor]
Length = 422
Score = 158 bits (399), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 121/244 (49%), Gaps = 53/244 (21%)
Query: 628 LPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGA 687
L ++V+ +I+ EA +GRSLFERL + KHLLN+QYRMHP IS FP FY I+D
Sbjct: 119 LQSVVKIQIAKEAKYGRSLFERLCEIGWHKHLLNVQYRMHPDISRFPMKVFYDETIIDAT 178
Query: 688 NVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
S + G FG YSFI + G E S +N+VE I+ KL K
Sbjct: 179 EKTSA----KIFIGDIFGNYSFIIVEYGIEHQTGQSVQNVVEAVVAATIVSKLSK----- 229
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT 807
G E+DIII+S VR N
Sbjct: 230 --------------------------------------------GDEKDIIILSIVRNNK 245
Query: 808 GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEER 867
G+IGF+ R NVALTRAR CLWILG+E+TL S+S+W LV DAK R CFF+A +
Sbjct: 246 FGNIGFLDSGGRANVALTRARDCLWILGNEKTLTKSKSVWSELVQDAKGRSCFFDARADL 305
Query: 868 NLAK 871
L K
Sbjct: 306 ELDK 309
>gi|443894317|dbj|GAC71665.1| tRNA-splicing endonuclease positive effector [Pseudozyma antarctica
T-34]
Length = 2923
Score = 158 bits (399), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 151/269 (56%), Gaps = 10/269 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL-TS 652
+VIDEAAQ E S IPL+ G +++GD QLP V S+ +++ G+ +SLF R+
Sbjct: 1719 VVIDEAAQAVELSSMIPLRY-GCKQCIMVGDPNQLPPTVISQQAEKLGYSQSLFVRMFEK 1777
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYSF 709
+ HLL+IQYRMHP IS+FP+ FY +++LDG A + + + K LT + F
Sbjct: 1778 APQAVHLLSIQYRMHPEISVFPSKAFYDSKLLDGPDMAELTRQPWHKYELT----RPFKF 1833
Query: 710 INIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKK 769
++ +HS N E + + + ++L IG+V+ Y AQV +R+
Sbjct: 1834 LSTKAPESPGRFHSIINREEANVALALYERLRTDHPRENFDYRIGIVTMYKAQVFELRRT 1893
Query: 770 IGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR-CNTGGSIGFISKPQRVNVALTRAR 828
Y + ++DGFQG E+DIII+S VR + SIGF+S +R+NVA+TRA+
Sbjct: 1894 FQQRYGQDIVERIDFNTVDGFQGQEKDIIILSCVRSASEPRSIGFLSDRRRLNVAVTRAK 1953
Query: 829 HCLWILGSERTLISSESIWGALVCDAKAR 857
L+++G+ L ++IW +LV A+ R
Sbjct: 1954 SNLFVIGNAEHLRRGDAIWESLVATAEQR 1982
Score = 44.3 bits (103), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 35/139 (25%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK---------- 306
+NE Q A+L L G LI GPPGTGKTKT+ L+ + +
Sbjct: 1470 VNEPQARAILGSL------ATEGFSLIQGPPGTGKTKTICALIGAFVSNRKGPSTSVQAG 1523
Query: 307 ---------CRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKD 357
+ L C P+N AI E+A R ++ + D ++ P ++ G D
Sbjct: 1524 QAQGKVGATKKILLCAPSNAAIDEVAKRARAGMRLA---DGKTFHP-----KVVRVGRDD 1575
Query: 358 RLKVNPGFEEIYLNYRIKK 376
+ V+ ++I L+Y I +
Sbjct: 1576 SMNVS--VKDISLDYLIDQ 1592
>gi|302811082|ref|XP_002987231.1| hypothetical protein SELMODRAFT_125376 [Selaginella moellendorffii]
gi|300145128|gb|EFJ11807.1| hypothetical protein SELMODRAFT_125376 [Selaginella moellendorffii]
Length = 820
Score = 158 bits (399), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 158/308 (51%), Gaps = 20/308 (6%)
Query: 561 VLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAV 620
+LE+ ++L FS +S ++ + + +VIDEAAQ E + +PL G A
Sbjct: 452 ILEEAAIVCSTLSFSGSSVFSRMK----RGFDVVVIDEAAQAVEPSTLVPLT-HGCKQAF 506
Query: 621 LIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYR 680
L+GD QLPA V S + + G+G S+F+R + +LN QYRMHP I FP+ +FY
Sbjct: 507 LVGDPIQLPATVLSTEAVKHGYGTSMFKRFQKAGYPVQMLNTQYRMHPQIRDFPSKEFYG 566
Query: 681 NQILDGANVKSKSYEKQYLTGTEFGTYSFINIIG------GREDFIYHSCRNIVEVSAVI 734
+ DGA V+ ++ + + FG ++F +I G G +I N E V+
Sbjct: 567 EALEDGAEVEQQT-SRAWHEYCCFGPFAFFDIEGRETQPPGSGSYI-----NSDEAEFVL 620
Query: 735 KILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFT-VKVKSIDGFQGG 793
+ + L + K + V+SPY QV +R + E KD + + ++DGFQG
Sbjct: 621 VLYRHLIALYPELKGGPHVAVISPYKHQVTTLRTRFA-EVLGKDAARLIDINTVDGFQGR 679
Query: 794 EEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCD 853
E+DI I S VR N IGF+S +R+NV LTRAR + ++G L E WG L+
Sbjct: 680 EKDIAIFSCVRANKSKGIGFVSDFRRMNVGLTRARASMLVVGCAAALRQDEH-WGNLIKH 738
Query: 854 AKARQCFF 861
A+ R F
Sbjct: 739 AQQRNRMF 746
>gi|328770910|gb|EGF80951.1| hypothetical protein BATDEDRAFT_24512 [Batrachochytrium dendrobatidis
JAM81]
Length = 1938
Score = 157 bits (398), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 166/315 (52%), Gaps = 13/315 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT-S 652
+++DEA Q E IPL G +++GD QLP + S+++ + + +SLF+RL S
Sbjct: 1578 VIVDEACQAVELSCLIPL-CYGAQKCIMVGDPNQLPPTILSQVAQDYSYDQSLFQRLMKS 1636
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVK---SKSYEKQYLTGTEFGTYSF 709
S HLL+IQYRMHP ISLFP+L FY + + D + S + L F Y
Sbjct: 1637 CKDSIHLLSIQYRMHPHISLFPSLNFYNSALKDAPGLNTICSAPWHSHRL----FPPYLL 1692
Query: 710 INIIGGREDF-IYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
+N + G+E F S N E S + +++ + + K IG+++ Y Q +R
Sbjct: 1693 LNAVSGQEQFGSRKSLFNHEEASLCVGLVKTICTNFPDIKFFARIGIITFYKLQARKLRD 1752
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC--NTGGSIGFISKPQRVNVALTR 826
+ + +V + ++DGFQG E+DII++S VR +T S+GFIS +R+NVALTR
Sbjct: 1753 MFVKHFGHAILNSVDINTVDGFQGQEKDIILLSCVRASKDTDRSVGFISDTRRMNVALTR 1812
Query: 827 ARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAE 886
A+H L I+G+ +L ++ +W LV +AK R + + S + +I ++
Sbjct: 1813 AKHSLIIIGNSHSL-KTDPVWKNLVNNAKQRSLTLKISSKDIQVGSNATFSNLIDDIPSK 1871
Query: 887 SLTSTSQGGKKEEFE 901
S +S +K E +
Sbjct: 1872 SSSSGMTNNRKNETQ 1886
>gi|124087769|ref|XP_001346867.1| TRNA-splicing endonuclease positive effector [Paramecium
tetraurelia strain d4-2]
gi|145474903|ref|XP_001423474.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|50057256|emb|CAH03240.1| TRNA-splicing endonuclease positive effector, putative [Paramecium
tetraurelia]
gi|124390534|emb|CAK56076.1| unnamed protein product [Paramecium tetraurelia]
Length = 1124
Score = 157 bits (398), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 154/277 (55%), Gaps = 20/277 (7%)
Query: 588 IKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLF 647
I L++DEAAQ E + IPL+L G+ +LIGD QLPA S +S + RSLF
Sbjct: 722 IDSFELLIVDEAAQCTEPSNNIPLRL-GMRKMILIGDPKQLPATTFSSVSQITHYNRSLF 780
Query: 648 ERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTY 707
ER+ + L++QYRMHP I FP+L FY N+++D +V YE+ + F
Sbjct: 781 ERILDNDFKPFFLDMQYRMHPQIREFPSLNFYDNKLIDHFSV----YER-LIPNNFFNQR 835
Query: 708 SFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQV---- 763
+ E S +N E + ++++L+ + A+ S+GV+ Y AQV
Sbjct: 836 VLFIDVESEETKDEKSFQNQTECNMIVEVLKNIKNAYPSQ----SLGVICAYKAQVRLIK 891
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
+ I++++G + +++ ++D FQG E D+I+ S VR ++ G+IGF+ +RVNVA
Sbjct: 892 LEIKRQLGDLMD-----EIQINTVDSFQGQERDVILFSCVRSSSSGNIGFLQDGRRVNVA 946
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
LTRA++ L+I G+ TL + +W L+ + +R+ +
Sbjct: 947 LTRAKNALFIFGNAITLGQCQ-LWKNLLLNLHSRKLY 982
Score = 46.2 bits (108), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 8/58 (13%)
Query: 279 GVELIWGPPGTGKTKTVSMLLLTL---LRI-----KCRTLACTPTNVAITELASRVLK 328
G+ L+ GPPGTGKT T+ LL + ++I K + L C P+N AI E+ R+L+
Sbjct: 517 GISLLQGPPGTGKTHTLIGLLSGVYEYMKIMNKFPKKKILICAPSNAAIDEIIFRILQ 574
>gi|320036907|gb|EFW18845.1| tRNA-splicing endonuclease [Coccidioides posadasii str. Silveira]
Length = 1086
Score = 157 bits (397), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 154/274 (56%), Gaps = 8/274 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + +L+GD QLP V SK + + +SLF R+ +
Sbjct: 486 VIIDEAAQSIELSALIPLKY-GCSKCILVGDPKQLPPTVLSKEASRFQYEQSLFVRMQA- 543
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH + HLL+ QYRMHP IS FP+ FY ++ DG ++ +K + + + G Y F +
Sbjct: 544 NHPQDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPSM-AKLRIRPWHSTELLGPYRFFD 602
Query: 712 IIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G HS N+ E+ +++ +L + + IG+++PY Q+ +++
Sbjct: 603 VQGMHASAPKGHSLVNMAELRVAMRLYDRLVQDFPTYDFAGKIGIITPYKGQLRELKQHF 662
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
+Y N V+ + D FQG E ++II S VR + G IGF++ +R+NV LTRA+
Sbjct: 663 ANKYGNAIFKAVEFNTTDAFQGRECEVIIFSCVRASNHG-IGFLADIRRMNVGLTRAKSS 721
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
LW+LG+ ++L E W L+ DA+ RQ + + D
Sbjct: 722 LWVLGNSQSLARGE-FWRGLINDARERQLYTDGD 754
Score = 43.5 bits (101), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 104/260 (40%), Gaps = 53/260 (20%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL-------RIK--------CRTLA-----CTPTNVAITE 321
LI GPPG+GKTKT+ L+ LL RI RTLA C P+N A+ E
Sbjct: 260 LIQGPPGSGKTKTIVALVGALLTPTLSEHRIAPPRPGDKTARTLAKKLLVCAPSNAAVDE 319
Query: 322 LASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECF 381
L R + VK R + + +L G D + N ++ L+ R+
Sbjct: 320 LVMRFKEGVKTLQGRAQKIS--------VLRLGRSDAINTN--VLDVTLDERVNAKLSEI 369
Query: 382 APLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERK- 440
+G S+ +D ++++ +++ER D +CR + +G E +
Sbjct: 370 GQKNGSERDLHSLYTEHKDSSNKFN----EIRERMD---------QCRAKAQGLPAELER 416
Query: 441 --PFLKYVRERFKCAVVSLRNCIFIFC--THLPKSYISENSFQEMVALKSLLDSFGNLLF 496
LK + + A+ S R+ L + I + E + + L G+ +F
Sbjct: 417 EFDLLKKKKAQLSQAIDSARDKSQAAARNAELTRRKIQQEIIDEAHVICATLSGSGHEMF 476
Query: 497 QDNVVSKELEKLFSHSVDEG 516
Q +S E E + +DE
Sbjct: 477 Q--TLSIEFETVI---IDEA 491
>gi|242095510|ref|XP_002438245.1| hypothetical protein SORBIDRAFT_10g010515 [Sorghum bicolor]
gi|241916468|gb|EER89612.1| hypothetical protein SORBIDRAFT_10g010515 [Sorghum bicolor]
Length = 534
Score = 157 bits (396), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/265 (38%), Positives = 133/265 (50%), Gaps = 56/265 (21%)
Query: 563 EDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLI 622
E + + L F T S +L++ + + LVIDEAA LKE ES +PL + GI H VLI
Sbjct: 326 ERMLLQASQLVFCTPFMSARLNN---EQYDILVIDEAAYLKECESMVPLSINGIKHLVLI 382
Query: 623 GDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQ 682
GD+ QL ++V+S+I+ EA +GRSLFERL + KHLLN+QYRMHP IS P FY
Sbjct: 383 GDDLQLQSVVKSQIAKEAKYGRSLFERLCEIGWHKHLLNVQYRMHPDISRLPMKVFYDET 442
Query: 683 ILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYK 742
I+D K+ K ++ G FG YSFIN+ E S +N+VE + I+ KL K
Sbjct: 443 IIDAT---EKTSAKIFI-GDIFGNYSFINVEYAIEHQTGQSVQNVVEAAVAATIVSKLSK 498
Query: 743 AWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIIST 802
G E+DIII+ST
Sbjct: 499 -------------------------------------------------GDEKDIIILST 509
Query: 803 VRCNTGGSIGFISKPQRVNVALTRA 827
VR N G IGF+ R NVALTRA
Sbjct: 510 VRNNKFGKIGFLDSCGRANVALTRA 534
Score = 72.0 bits (175), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 150/348 (43%), Gaps = 60/348 (17%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
V SW + DI +Q + IP F++ Y +F P+L+E ++ SG++ + R
Sbjct: 15 VLSWPIMDILNQDNPVKLPKMIPNEFKAWDDYKEAFRIPMLQEIWDKINSGMDTISRC-- 72
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRV 150
Q + E N Y I+ + + G P D+++L+ E + ++
Sbjct: 73 -QCVPCSEKHSETPNVYRIKGN------TKEGNAPKME---DVMLLS---AEGLGSRDQI 119
Query: 151 GRTWTFVSVTTV--PDDEDENKKENRYKVKARNNMQVHDKTKKSFF-FIYLTNILPNKRI 207
+ +F ++ V D + +++K KKS++ ++L N+
Sbjct: 120 IHSRSFCTILVVLHVSTTDMIVRLSQWKFGKMK--------KKSYYQIMHLANLNTYLSS 171
Query: 208 WNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLA 267
W + + + T ++ E + K + E F LNESQ A+ +
Sbjct: 172 WEVMKCPRKSSELCNLRWTKNMNGADGECGIFEGKAKVVEAVRVDFG--LNESQSDAVAS 229
Query: 268 CLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVL 327
C+ + G S V LIWGPPGTGKTKTVS++L ++ +LASR++
Sbjct: 230 CISAIKSGE-SSVRLIWGPPGTGKTKTVSVIL------------------SLVQLASRLI 270
Query: 328 KLVKESYKRDSRSNTPICPLGDILLFGNKDRL-----KVNPGFEEIYL 370
LV +S + LG+I+LFG+ D+L K + +I+L
Sbjct: 271 SLVDKSTETKHL-------LGNIILFGS-DKLSSCWKKTDKTLSKIFL 310
>gi|68478193|ref|XP_716838.1| hypothetical protein CaO19.8554 [Candida albicans SC5314]
gi|68478314|ref|XP_716778.1| hypothetical protein CaO19.939 [Candida albicans SC5314]
gi|46438461|gb|EAK97791.1| hypothetical protein CaO19.939 [Candida albicans SC5314]
gi|46438523|gb|EAK97852.1| hypothetical protein CaO19.8554 [Candida albicans SC5314]
Length = 1019
Score = 157 bits (396), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 149/276 (53%), Gaps = 11/276 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IP+ + G +L+GD QL ++ K + +AG +SLFERL L
Sbjct: 602 VLIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDKKAADAGLKQSLFERLVFL 660
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
H L +QYRMHP +S FP+ FY + +G + E+ T
Sbjct: 661 GHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFPWPVIDTPMMFWAN 720
Query: 714 GGREDFIY--HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
GRE+ +S N VE V KI+ KL+K + +Q IGV++PY Q + + +
Sbjct: 721 YGREELSASGNSYLNRVEAMNVEKIITKLFKDGIKPEQ---IGVITPYEGQRAYLVQFMS 777
Query: 772 FE---YENKDGF-TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ +D + V++ S+D FQG E+D II+S VR N SIGF+S P+R+NVALTRA
Sbjct: 778 VNSTLLDKRDQYLNVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVALTRA 837
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
++ L ILG+ R+L + +W L+ + + C +
Sbjct: 838 KYGLVILGNPRSLCRNR-LWNHLLIHFREKGCLVDG 872
Score = 52.0 bits (123), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 247 EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI- 305
+KF + LN SQ A+ L+R + LI GPPGTGKT T + ++ L ++
Sbjct: 431 KKFSHPKLTELNVSQTNAVRTVLQR-------PLSLIQGPPGTGKTVTSATIIYHLSKLN 483
Query: 306 KCRTLACTPTNVAITELASRV 326
K + L C P+NVA+ LA+++
Sbjct: 484 KQKILVCAPSNVAVDHLAAKL 504
>gi|238882462|gb|EEQ46100.1| ATP-dependent helicase NAM7 [Candida albicans WO-1]
Length = 1019
Score = 157 bits (396), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 149/276 (53%), Gaps = 11/276 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IP+ + G +L+GD QL ++ K + +AG +SLFERL L
Sbjct: 602 VLIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDKKAADAGLKQSLFERLVFL 660
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
H L +QYRMHP +S FP+ FY + +G + E+ T
Sbjct: 661 GHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFPWPVIDTPMMFWAN 720
Query: 714 GGREDFIY--HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
GRE+ +S N VE V KI+ KL+K + +Q IGV++PY Q + + +
Sbjct: 721 YGREELSASGNSYLNRVEAMNVEKIITKLFKDGIKPEQ---IGVITPYEGQRAYLVQFMS 777
Query: 772 FE---YENKDGF-TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ +D + V++ S+D FQG E+D II+S VR N SIGF+S P+R+NVALTRA
Sbjct: 778 VNSTLLDKRDQYLNVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVALTRA 837
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
++ L ILG+ R+L + +W L+ + + C +
Sbjct: 838 KYGLVILGNPRSLCRNR-LWNHLLIHFREKGCLVDG 872
Score = 52.0 bits (123), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 247 EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI- 305
+KF + LN SQ A+ L+R + LI GPPGTGKT T + ++ L ++
Sbjct: 431 KKFSHPKLTELNVSQTNAVRTVLQR-------PLSLIQGPPGTGKTVTSATIIYHLSKLN 483
Query: 306 KCRTLACTPTNVAITELASRV 326
K + L C P+NVA+ LA+++
Sbjct: 484 KQKILVCAPSNVAVDHLAAKL 504
>gi|190349039|gb|EDK41614.2| hypothetical protein PGUG_05712 [Meyerozyma guilliermondii ATCC
6260]
Length = 949
Score = 156 bits (395), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 100/275 (36%), Positives = 156/275 (56%), Gaps = 15/275 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IP+ + G +L+GD QL ++ K + +AG +SLFERL L
Sbjct: 564 VLIDESTQASEPEIMIPI-VKGAKQVILVGDHQQLGPVILHKKAGDAGLKQSLFERLVVL 622
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGT--EFGTYSFIN 711
H L +QYRMHP +S FP+ FY + +G + +S++++ + +F + N
Sbjct: 623 GHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVSSESRTFKNETFPWPVLDFPMMFWAN 682
Query: 712 IIGGREDFIY--HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKK 769
GRE+ +S N VE V KI+ +L+K V ++Q IGVV+PY Q I +
Sbjct: 683 Y--GREEISASGYSYLNRVEAMNVEKIITRLFKQGVKAEQ---IGVVTPYEGQRAYILQH 737
Query: 770 I---GFEYENKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALT 825
+ G + ++ ++ V+V S+D FQG E+D II+S VR N IGF+S +R+NVALT
Sbjct: 738 MSLTGSLVDKREQYSEVEVASVDAFQGREKDYIILSCVRANETHGIGFLSDSRRLNVALT 797
Query: 826 RARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
RA++ L I+G+ R L S +W L+ + + C
Sbjct: 798 RAKYGLVIVGNPRCL-SKNKLWNHLLIHFREKGCL 831
Score = 45.1 bits (105), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 33/135 (24%)
Query: 247 EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTL---- 302
EK + LNESQ A+ L+R + LI GPPGTGKT T + ++ L
Sbjct: 377 EKLSIPNLTALNESQENAVRTVLQR-------PLSLIQGPPGTGKTFTSATIIYHLRNMI 429
Query: 303 --------------LRIKCRTLACTPTNVAITELAS-------RVLKLVKESYKRDSRSN 341
+ + L C P+NVA+ LA +V++L +S + D+ S+
Sbjct: 430 NKKPSGKKSSKSKKKQTAEKILVCAPSNVAVDHLAEKIANLGVKVMRLTAKS-REDAESS 488
Query: 342 TPICPLGDILLFGNK 356
L ++++ NK
Sbjct: 489 VSHLSLHNLIVQTNK 503
>gi|414585754|tpg|DAA36325.1| TPA: hypothetical protein ZEAMMB73_667658, partial [Zea mays]
Length = 392
Score = 156 bits (395), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 181/371 (48%), Gaps = 51/371 (13%)
Query: 21 KKAVGFAGHTVFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRS 80
K + + + VFSWS+ DIF + + +V++IP++F S + Y SF +PL+EE + S
Sbjct: 37 KFGLSYLDNQVFSWSVSDIFDRDLLRKKVKRIPDTFTSFESYLDSFTWPLIEEVHADVFS 96
Query: 81 GLEAMRRAPYAQVIAFEEL---KPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLA 137
L+ A + +V L KP G V +E Y + DI+VL+
Sbjct: 97 SLDGYSEANFIEVTQVGNLDASKPI----LGFRVA--EPVKDEKSRETYVPVENDIIVLS 150
Query: 138 DFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQV----HDK-TKKS 192
KP VSDL + +FV + + E++ + V + + V H K K+
Sbjct: 151 SHKPRHVSDLTQ--NKSSFVLGSVIKTGEEDGFPPDWCVVHLSSAILVEADCHTKIPKRP 208
Query: 193 FFFIYLTNILPNKRIWNSLHM---CGN----------------WKVITQVLGTDSVVDER 233
F ++L N+ RIW LH+ C N W+ + +S +
Sbjct: 209 LFLVFLINMKTYNRIWRCLHLGQNCSNLFELQNKKSSGPVTKAWEFKPKPAEAESSQCSQ 268
Query: 234 CELCSVQRKGQWD--EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGK 291
C R +W EKFG LN+SQ+ A+ C+ +D + S ++L+WGPPGTGK
Sbjct: 269 PSQCFDGRLIEWLGLEKFG------LNDSQLNAVSDCVSLMD-SNSSSIKLLWGPPGTGK 321
Query: 292 TKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDIL 351
TKT+S +L +L RTLAC PTN A+ E+A+R++ L ++S+ L DI+
Sbjct: 322 TKTISSILWAMLIKGRRTLACAPTNTAVLEIAARIVNLT-------AKSSDGTVFLNDIV 374
Query: 352 LFGNKDRLKVN 362
LFGNK ++K++
Sbjct: 375 LFGNKKKMKID 385
>gi|255951120|ref|XP_002566327.1| Pc22g24390 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593344|emb|CAP99727.1| Pc22g24390 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 2167
Score = 156 bits (395), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 158/293 (53%), Gaps = 14/293 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + VL+GD QLP V SK++ + + +SLF R+
Sbjct: 1549 VIIDEAAQCIELSALIPLKY-GCSKCVLVGDPKQLPPTVLSKMASKFQYEQSLFVRMQK- 1606
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYS 708
NH + HLL++QYRMHP+IS FP++ FY ++ DG A ++ + + + L G Y
Sbjct: 1607 NHPQDVHLLDVQYRMHPAISHFPSVTFYDGKLQDGPDMATLRQRPWHQSEL----LGPYR 1662
Query: 709 FINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F ++ G + HS N E+ +++ +L IG+++PY Q+ ++
Sbjct: 1663 FFDVQGMHSSAVRGHSLVNYAELQVAMRLYDRLITDVKEYDFAGKIGIITPYKGQLRELK 1722
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ Y V + D FQG E ++II S VR + G IGF++ +R+NV LTRA
Sbjct: 1723 NQFTQRYGEDILRKVDFNTTDAFQGRESEVIIFSCVRASNKG-IGFLADIRRMNVGLTRA 1781
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKEL 880
+ LW+LG+ ++L + W L+ +A+ R + D + L K + KE+
Sbjct: 1782 KSSLWVLGNSQSLEQGQ-FWNGLIKNARERNVYTEGDIMKILEKPQFTGYKEI 1833
Score = 43.9 bits (102), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 19/77 (24%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLR-------------------IKCRTLACTPTNVAITEL 322
LI GPPG+GKTKT++ L+ +LL + + L C P+N A+ EL
Sbjct: 1325 LIQGPPGSGKTKTITALVGSLLSDVLGKQVVKVNGAPVARNALSKKLLLCAPSNAAVDEL 1384
Query: 323 ASRVLKLVKESYKRDSR 339
R+ VK ++ R +
Sbjct: 1385 VMRLKDGVKTTHGRQEK 1401
>gi|146411955|ref|XP_001481949.1| hypothetical protein PGUG_05712 [Meyerozyma guilliermondii ATCC
6260]
Length = 949
Score = 156 bits (395), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 100/275 (36%), Positives = 156/275 (56%), Gaps = 15/275 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IP+ + G +L+GD QL ++ K + +AG +SLFERL L
Sbjct: 564 VLIDESTQASEPEIMIPI-VKGAKQVILVGDHQQLGPVILHKKAGDAGLKQSLFERLVVL 622
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGT--EFGTYSFIN 711
H L +QYRMHP +S FP+ FY + +G + +S++++ + +F + N
Sbjct: 623 GHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVSSESRTFKNETFPWPVLDFPMMFWAN 682
Query: 712 IIGGREDFIY--HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKK 769
GRE+ +S N VE V KI+ +L+K V ++Q IGVV+PY Q I +
Sbjct: 683 Y--GREEISASGYSYLNRVEAMNVEKIITRLFKQGVKAEQ---IGVVTPYEGQRAYILQH 737
Query: 770 I---GFEYENKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALT 825
+ G + ++ ++ V+V S+D FQG E+D II+S VR N IGF+S +R+NVALT
Sbjct: 738 MLLTGSLVDKREQYSEVEVASVDAFQGREKDYIILSCVRANETHGIGFLSDSRRLNVALT 797
Query: 826 RARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
RA++ L I+G+ R L S +W L+ + + C
Sbjct: 798 RAKYGLVIVGNPRCL-SKNKLWNHLLIHFREKGCL 831
Score = 44.7 bits (104), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 25/101 (24%)
Query: 247 EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTL---- 302
EK + LNESQ A+ L+R + LI GPPGTGKT T + ++ L
Sbjct: 377 EKLSIPNLTALNESQENAVRTVLQR-------PLSLIQGPPGTGKTFTSATIIYHLRNMI 429
Query: 303 --------------LRIKCRTLACTPTNVAITELASRVLKL 329
+ + L C P+NVA+ LA ++ L
Sbjct: 430 NKKPSGKKSSKSKKKQTAEKILVCAPSNVAVDHLAEKIANL 470
>gi|50303751|ref|XP_451821.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640953|emb|CAH02214.1| KLLA0B06435p [Kluyveromyces lactis]
Length = 969
Score = 156 bits (395), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 168/328 (51%), Gaps = 10/328 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IP+ + G VL+GD QL ++ + + +AG +SLFERL SL
Sbjct: 567 VLIDESTQASEPECLIPI-VKGAKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERLISL 625
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
H L +QYRM+P +S FP+ FY + +G ++ ++ +
Sbjct: 626 GHIPIRLEVQYRMNPQLSEFPSNMFYEGSLQNGVTIEQRTIARSTFPWPIHTIPMMFWAN 685
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK--K 769
GRE+ + S N +E KI+ +L+K V +Q IGV++PY Q + + +
Sbjct: 686 YGREEISGNGTSYLNRIEAMNCEKIITRLFKDGVKPEQ---IGVITPYEGQRAYVVQYMQ 742
Query: 770 IGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+ E V+V S+D FQG E+D II+S VR N +IGF+S P+R+NVALTRA++
Sbjct: 743 MNGSMEKSLYMGVEVASVDAFQGREKDYIILSCVRANERNTIGFLSDPRRLNVALTRAKY 802
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNA-DEERNLAKARLEVSKELVEIGAESL 888
L ILG+ R L S S+W L+ + + C + L +L +
Sbjct: 803 GLIILGNPRAL-SRNSLWSHLLLHFREKGCLVEGFLDNLQLCTVQLTKPSRAPRKAPSNN 861
Query: 889 TSTSQGGKKEEFEFEFVKAFRSINLIHK 916
+S +Q + +F+ + + +F N++ K
Sbjct: 862 SSYTQYAGQRDFDTQSLVSFGGQNVVEK 889
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 13/92 (14%)
Query: 249 FGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KC 307
F P F+ LN+SQ A+ L+R + LI GPPGTGKT T + ++ L +I K
Sbjct: 400 FVPHFTE-LNQSQSNAVKHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKQ 451
Query: 308 RTLACTPTNVAITELASRV----LKLVKESYK 335
R L C P+NVA+ LA+++ LK+V+ + K
Sbjct: 452 RVLVCAPSNVAVDHLAAKLHSMGLKVVRLTAK 483
>gi|241955273|ref|XP_002420357.1| ATP-dependent RNA helicase, putative; atp-dependent helicase, SFI
superfamily, putative [Candida dubliniensis CD36]
gi|223643699|emb|CAX41433.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 1016
Score = 156 bits (395), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 149/276 (53%), Gaps = 11/276 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IP+ + G +L+GD QL ++ K + +AG +SLFERL L
Sbjct: 604 VLIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDKKAADAGLKQSLFERLVFL 662
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
H L +QYRMHP +S FP+ FY + +G + E+ T
Sbjct: 663 GHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFPWPVIDTPMMFWAN 722
Query: 714 GGREDFIY--HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
GRE+ +S N VE V KI+ KL+K + +Q IGV++PY Q + + +
Sbjct: 723 YGREELSASGNSYLNRVEAMNVEKIITKLFKDGIKPEQ---IGVITPYEGQRAYLVQFMS 779
Query: 772 FE---YENKDGF-TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ +D + V++ S+D FQG E+D II+S VR N SIGF+S P+R+NVALTRA
Sbjct: 780 VNSTLLDKRDQYLNVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVALTRA 839
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
++ L ILG+ R+L + +W L+ + + C +
Sbjct: 840 KYGLVILGNPRSLCRNR-LWNHLLIHFREKGCLVDG 874
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 12/94 (12%)
Query: 247 EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI- 305
+KF + LN SQ A+ L+R + LI GPPGTGKT T + ++ L ++
Sbjct: 433 KKFSHPKLTELNVSQTNAVRTVLQR-------PLSLIQGPPGTGKTVTSATIIYHLSKLN 485
Query: 306 KCRTLACTPTNVAITELASRV----LKLVKESYK 335
K + L C P+NVA+ LA+++ LK+V+ + K
Sbjct: 486 KQKILVCAPSNVAVDHLAAKLDLLGLKVVRLTAK 519
>gi|384248536|gb|EIE22020.1| hypothetical protein COCSUDRAFT_17170, partial [Coccomyxa
subellipsoidea C-169]
Length = 367
Score = 156 bits (395), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 160/319 (50%), Gaps = 26/319 (8%)
Query: 570 ASLFFSTASSSYK--LHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQ 627
A + F+T SS+ + +E P ++IDEAAQ E + PL + G AVL+GD Q
Sbjct: 48 AEMVFTTLSSTGRRIFQRLEGTPFETVLIDEAAQASEIAALQPL-VFGAKRAVLVGDPQQ 106
Query: 628 LPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGA 687
LPA V+S E RSLFERL +L++QYRMHP+I FP+ FY ++ DG
Sbjct: 107 LPATVKSAKGKELELERSLFERLQRAGCPVKMLSVQYRMHPTIREFPSNYFYNGRLEDGK 166
Query: 688 NVKSKS----YEKQYLTGTEFGTYSFINIIGGREDFIYH---SCRNIVE--VSAVIKILQ 738
+VK YE L Y ++ GRE S RN +
Sbjct: 167 SVKEAKPPVFYEHPLLK-----PYVIFDVSHGREQRGGSNGGSLRNQASPFFYSCFLTSH 221
Query: 739 KLYKAWVGSK-QKVSIGVVSPYTAQVVAIR----KKIGFEYENKDG--FTVKVKSIDGFQ 791
++ W+ + +GVV+PY Q +R + G E K TV ++++D FQ
Sbjct: 222 SIFSGWLAMQLGGCEVGVVTPYKQQKTCLRDTFLRAAGPEASAKARPLLTVMIETVDSFQ 281
Query: 792 GGEEDIIIISTVRCNTGGS-IGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGAL 850
G + D+II+S VR + S +GF++ +R+NVA+TRA+ LW+LGS TL +W AL
Sbjct: 282 GKQLDVIILSCVRASDRKSGVGFLADVRRMNVAITRAKQALWVLGSAATL-ERNPVWAAL 340
Query: 851 VCDAKARQCFFNADEERNL 869
+ +A+ R C R L
Sbjct: 341 LANARERGCVIKEANARCL 359
>gi|425771573|gb|EKV10011.1| tRNA-splicing endonuclease, putative [Penicillium digitatum Pd1]
Length = 2154
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 161/298 (54%), Gaps = 10/298 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + VL+GD QLP V SK++ + + +SLF R+
Sbjct: 1549 VIIDEAAQCIELSALIPLKY-GCSKCVLVGDPKQLPPTVLSKMASKFQYEQSLFVRMQK- 1606
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH + HLL+IQYRMHP+IS FP++ FY ++ DG ++ +K ++ + Y F +
Sbjct: 1607 NHPQDVHLLDIQYRMHPAISHFPSVTFYDGKLQDGPDM-AKLRQRPWHQSELLSPYRFFD 1665
Query: 712 IIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G HS N E+ +++ +L IG+++PY Q+ ++ +
Sbjct: 1666 VQGMHSSAARGHSLINYAELQVAMQLYDRLITDVKEYDFAGKIGIITPYKGQLRELKNQF 1725
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
Y V + D FQG E ++II S VR + G IGF++ +R+NV LTRA+
Sbjct: 1726 TQRYGEDILRKVDFNTTDAFQGRESEVIIFSCVRASNKG-IGFLADIRRMNVGLTRAKSS 1784
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK--ELVEIGAE 886
LW+LG+ ++L + W L+ +A+ R + D + L K + K E+V++G E
Sbjct: 1785 LWVLGNSQSLEQGQ-FWNGLIKNARERNVYTEGDIVKILQKPQFTGYKEIEMVDLGTE 1841
>gi|145499757|ref|XP_001435863.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402999|emb|CAK68466.1| unnamed protein product [Paramecium tetraurelia]
Length = 928
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 144/266 (54%), Gaps = 16/266 (6%)
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS 652
F++IDEA Q E E +P+ + G H +L+GD QL +V+S+ + G RSLFERL
Sbjct: 536 FVLIDEATQAIEPECLLPM-IKGAQHVILVGDHRQLGPVVQSREAASVGLDRSLFERLVQ 594
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L L +QYRMHP +++FP+ FY + +G + +++ + + FIN+
Sbjct: 595 LGIRPVRLQVQYRMHPELTVFPSNTFYEGTLQNGVTISDRTHSGNFPWPNKQKPMIFINV 654
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGF 772
G ++ + S + + + + Q +Y + + + IG+++PY Q I
Sbjct: 655 QG--QEQLSASGTSYLNTQEAVAVEQAVYYLYQNTVKLNKIGIITPYKGQRTYI-----I 707
Query: 773 EYENKDG-------FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALT 825
Y ++G ++V S+DGFQG E+D IIIS VR N IGF++ P+R+NV +T
Sbjct: 708 SYLQRNGQLPYNQYRDIEVASVDGFQGREKDFIIISCVRSNDTQGIGFLTNPRRLNVTIT 767
Query: 826 RARHCLWILGSERTLISSESIWGALV 851
RAR L I+G+ R L +++W ++
Sbjct: 768 RARFGLIIIGNARVL-CKDNLWNNML 792
Score = 45.8 bits (107), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 277 RSGVELIWGPPGTGKTKTVSMLLLTLLRI------KCRTLACTPTNVAITELASRVLKLV 330
+S + LI GPPGTGKT T + ++ L++ + + L C P+N+ + +LA ++ K
Sbjct: 381 KSPLSLIQGPPGTGKTVTSATIVHQLVKALEKQKQRGQILVCAPSNIVVDQLAEKINKTG 440
Query: 331 KESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRI 374
+ + S++ + + L N+ R P + ++ + Y +
Sbjct: 441 VKVVRLCSKTRESVSTTIEFLTLHNQVRSLDIPQYHQLQMFYEL 484
>gi|425777077|gb|EKV15267.1| tRNA-splicing endonuclease, putative [Penicillium digitatum PHI26]
Length = 2154
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 161/298 (54%), Gaps = 10/298 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + VL+GD QLP V SK++ + + +SLF R+
Sbjct: 1549 VIIDEAAQCIELSALIPLKY-GCSKCVLVGDPKQLPPTVLSKMASKFQYEQSLFVRMQK- 1606
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH + HLL+IQYRMHP+IS FP++ FY ++ DG ++ +K ++ + Y F +
Sbjct: 1607 NHPQDVHLLDIQYRMHPAISHFPSVTFYDGKLQDGPDM-AKLRQRPWHQSELLSPYRFFD 1665
Query: 712 IIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ G HS N E+ +++ +L IG+++PY Q+ ++ +
Sbjct: 1666 VQGMHSSAARGHSLINYAELQVAMQLYDRLITDVKEYDFAGKIGIITPYKGQLRELKNQF 1725
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
Y V + D FQG E ++II S VR + G IGF++ +R+NV LTRA+
Sbjct: 1726 TQRYGEDILRKVDFNTTDAFQGRESEVIIFSCVRASNKG-IGFLADIRRMNVGLTRAKSS 1784
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK--ELVEIGAE 886
LW+LG+ ++L + W L+ +A+ R + D + L K + K E+V++G E
Sbjct: 1785 LWVLGNSQSLEQGQ-FWNGLIKNARERNVYTEGDIVKILQKPQFTGYKEIEMVDLGTE 1841
>gi|357163477|ref|XP_003579744.1| PREDICTED: probable helicase DDB_G0274399-like isoform 4
[Brachypodium distachyon]
Length = 762
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 151/295 (51%), Gaps = 25/295 (8%)
Query: 570 ASLFFSTAS-SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 628
A++ FST S S + S + + ++IDEAAQ +GD QL
Sbjct: 420 AAIVFSTLSFSGSTVFSRMTRSFDVVIIDEAAQA-------------------VGDPVQL 460
Query: 629 PAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
PA V S + + G+G SLF+R + +L IQYRMHP IS+FP+ +FY + DG
Sbjct: 461 PATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGILQDGEG 520
Query: 689 VKSKSYEKQYLTGTEFGTYSFINIIG-GREDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
+ K Y + FG + F +I G + S N EV + I +L +
Sbjct: 521 LNKKRPWHSY---SCFGPFCFFDIDGIESQPSGSGSWVNEDEVEFITLIYHQLATHYPEL 577
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT 807
K + V+SPY+ QV ++ + + ++ + V ++DGFQG E++++I S VRCN
Sbjct: 578 KSSSQVAVISPYSLQVKLLKDRFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNK 637
Query: 808 GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFN 862
+IGF+S +R+NVA+TRAR + ++GS TL + W LV AK R FF
Sbjct: 638 EQNIGFVSDFRRMNVAITRARSAVLVIGSASTL-KQDKHWNNLVESAKERDRFFT 691
>gi|357163468|ref|XP_003579741.1| PREDICTED: probable helicase DDB_G0274399-like isoform 1
[Brachypodium distachyon]
Length = 802
Score = 155 bits (393), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 151/295 (51%), Gaps = 25/295 (8%)
Query: 570 ASLFFSTAS-SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 628
A++ FST S S + S + + ++IDEAAQ +GD QL
Sbjct: 460 AAIVFSTLSFSGSTVFSRMTRSFDVVIIDEAAQA-------------------VGDPVQL 500
Query: 629 PAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
PA V S + + G+G SLF+R + +L IQYRMHP IS+FP+ +FY + DG
Sbjct: 501 PATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGILQDGEG 560
Query: 689 VKSKSYEKQYLTGTEFGTYSFINIIG-GREDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
+ K Y + FG + F +I G + S N EV + I +L +
Sbjct: 561 LNKKRPWHSY---SCFGPFCFFDIDGIESQPSGSGSWVNEDEVEFITLIYHQLATHYPEL 617
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT 807
K + V+SPY+ QV ++ + + ++ + V ++DGFQG E++++I S VRCN
Sbjct: 618 KSSSQVAVISPYSLQVKLLKDRFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNK 677
Query: 808 GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFN 862
+IGF+S +R+NVA+TRAR + ++GS TL + W LV AK R FF
Sbjct: 678 EQNIGFVSDFRRMNVAITRARSAVLVIGSASTL-KQDKHWNNLVESAKERDRFFT 731
>gi|320166766|gb|EFW43665.1| MAA3 [Capsaspora owczarzaki ATCC 30864]
Length = 2435
Score = 155 bits (393), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/278 (38%), Positives = 154/278 (55%), Gaps = 28/278 (10%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
+ L+IDEA+Q E ES IP + AVL+GD QLPA V S + ++G RSLFER+
Sbjct: 1737 FDMLIIDEASQCIELESLIPFRTRP-RVAVLVGDPMQLPATVTSMEARQSGLSRSLFERV 1795
Query: 651 T----------SLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILD---GANVKSKSYEKQ 697
+ + LL+ QYRM P I+ FPN +FY ++ + + + +E+
Sbjct: 1796 AQAVTSAPDRAAADSPIRLLSTQYRMAPQIAKFPNREFYEGRLTNFYPDDHFRLPCHEQ- 1854
Query: 698 YLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKL---YKAWVGSKQKVSIG 754
+F + F N+ G+E S N EV V ++LQKL Y Q VSIG
Sbjct: 1855 ----LQFRPFVFYNVHEGKEK-QDKSKINWEEVDTVSRVLQKLHTKYPEMFEGTQPVSIG 1909
Query: 755 VVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFI 814
V+SPY+ QV IRKKI + + F ++V ++D FQG E+DI++ S C IGF+
Sbjct: 1910 VLSPYSDQVGLIRKKIDQKLPHMQKF-IEVDTVDAFQGREKDIVLFS---CVFTDRIGFL 1965
Query: 815 SKPQRVNVALTRARHCLWILGSERTLIS-SESIWGALV 851
+ +R+NVALTRAR CL+++G +L++ SE W LV
Sbjct: 1966 ADTRRMNVALTRARKCLFVIGRAESLMNGSEPSWRHLV 2003
>gi|255732109|ref|XP_002550978.1| ATP-dependent helicase NAM7 [Candida tropicalis MYA-3404]
gi|240131264|gb|EER30824.1| ATP-dependent helicase NAM7 [Candida tropicalis MYA-3404]
Length = 993
Score = 155 bits (393), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 172/339 (50%), Gaps = 17/339 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IP+ + G +L+GD QL ++ + + +AG +SLFERL L
Sbjct: 592 VLIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDRKAADAGLKQSLFERLVFL 650
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
H L +QYRMHP +S FP+ FY + +G + E T
Sbjct: 651 GHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEDSTFPWPVIDTPMMFWAN 710
Query: 714 GGREDFIY--HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
GRE+ +S N VE V KI+ KL+K + +Q IGV++PY Q + + +
Sbjct: 711 YGREELSASGNSYLNRVEAMNVEKIITKLFKDGIQPEQ---IGVITPYEGQRAYLVQFMS 767
Query: 772 FE---YENKDGF-TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ +D + V++ S+D FQG E+D II+S VR N SIGF+S P+R+NVALTR+
Sbjct: 768 MNSTLLDKRDQYLDVEITSVDAFQGREKDYIILSCVRANDSQSIGFLSDPRRLNVALTRS 827
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAE- 886
++ L ILG+ R L + +W L+ + + C + + NL + ++++ + G
Sbjct: 828 KYGLIILGNPRALCRNR-LWNHLLIHFREKGCLVDGPLD-NLQLSMVQLNTNPTKPGGNF 885
Query: 887 ----SLTSTSQGGKKEEFEFEFVKAFRSINLIHKVLNSL 921
+ S +F+ V ++ + N I K+ N L
Sbjct: 886 KSRPKFGAASTVHSSTDFDSASVVSYDNTNTITKLNNEL 924
Score = 50.4 bits (119), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 12/90 (13%)
Query: 247 EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI- 305
++F + LN SQ A+ + L+R + LI GPPGTGKT T + ++ L ++
Sbjct: 421 KRFSHPKLTELNISQTNAVRSVLQR-------PLSLIQGPPGTGKTVTSATIIYHLSKLN 473
Query: 306 KCRTLACTPTNVAITELASRV----LKLVK 331
+ + L C P+NVA+ LA+++ LK+V+
Sbjct: 474 REKILVCAPSNVAVDHLAAKLDLLGLKVVR 503
>gi|145342493|ref|XP_001416216.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576441|gb|ABO94509.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 795
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/276 (37%), Positives = 152/276 (55%), Gaps = 12/276 (4%)
Query: 589 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
+P ++IDEA Q E + IP+ L+ H VL+GD QLPA V+S + +A F RSLFE
Sbjct: 517 RPFKTIIIDEACQANELSTLIPMTLSNA-HCVLVGDPKQLPATVKSLNAKQAKFDRSLFE 575
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYS 708
RL +LL +QYRMHP I +FP+ FY N ++D + +K + F Y
Sbjct: 576 RLMVAGMRCNLLTVQYRMHPQIRMFPSSIFYSNALIDAPGL-AKIRDLPSHRCWPFQPYM 634
Query: 709 FINIIGGREDFIYHSCR-NIVEVSAVIKILQKLYKAWV---GSKQKVSIGVVSPYTAQVV 764
+ + G+E R N VE S +I +L+K Y+ + S QKV V+S Y Q
Sbjct: 635 VFDAVDGQEIQAASFSRYNQVEASFIIDLLEKYYQLFPLVDDSTQKVV--VLSGYRKQCE 692
Query: 765 AIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
I+ + + G + V +ID FQG E D++I+S VR + IGF+S +R+NVAL
Sbjct: 693 LIQNML--HQKPTLGQLISVSTIDAFQGQEGDLVILSCVR-TSANDIGFVSDMRRLNVAL 749
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
TRA+ LWI+ + +S + W AL+ +AK R C+
Sbjct: 750 TRAKSSLWIV-CKCEAVSKFNFWKALLKNAKERGCY 784
Score = 45.8 bits (107), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 106/283 (37%), Gaps = 81/283 (28%)
Query: 249 FGPSFSSTLNESQVGAMLACLRRLDCGHRSG---VELIWGPPGTGKTKTVSML------- 298
F +TLN Q+ A+LAC++R+ +S LI GPPGTGKTK + L
Sbjct: 240 FVAPMQATLNTPQLDALLACVQRIHNSKKSDQPPFSLIQGPPGTGKTKVILSLANVVHLL 299
Query: 299 --------LLTLLR-------------------------IKCRTLACTPTNVAITELASR 325
+++L++ K R L C P+N A+ + R
Sbjct: 300 QFHDYFEKVMSLVKAGKVAQADSLKRKRQTEQDNANTHNFKPRILICAPSNAAVDNILER 359
Query: 326 VLKLVKESYKR-DSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFAPL 384
+ ++E + + D+ +P DIL + D V+ + + + R++ L E
Sbjct: 360 I---IRERFAQLDNSRYSP-----DILRLVSGD-ANVSTTAQSVSVEQRVRNLMEMST-- 408
Query: 385 SGWRHCFSSMIDLLEDCVSQYHIYVE---KLKE--REDCNVNQSEEK------ECRKETE 433
W +S QYH K+KE R+D V S E E R
Sbjct: 409 LDWSSWYS----------RQYHTVTVSELKIKEHLRDDIQVLNSSESSIIQLYEVRDRAL 458
Query: 434 GSKGERKPFLKYVRERFKCAVVSLRNCIF-IFCTHLPKSYISE 475
G L+ +R C + C F H+ S++ E
Sbjct: 459 GDLAR----LERLRPLHHCTSTTQNMCSFRQISEHISASFVDE 497
>gi|320589505|gb|EFX01966.1| tRNA-splicing [Grosmannia clavigera kw1407]
Length = 2062
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/284 (35%), Positives = 148/284 (52%), Gaps = 32/284 (11%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT-S 652
+VIDEAAQ E + IPL+ G +L+GD QLP V S+ + G+ +SLF R+ +
Sbjct: 1569 VVIDEAAQCVELSALIPLKY-GCAKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQRN 1627
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
HLL+ QYRMHP IS FP+ QFY +++DGA++ ++ + + G Y F ++
Sbjct: 1628 RPQDVHLLDTQYRMHPDISRFPSRQFYEGRLIDGADM-ARLRAQPWHANPLLGPYRFFDV 1686
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQ--KLYKAWVGSKQKVS----------IGVVSPYT 760
G +E H R++V + V LQ + ++A GS + S IG+++PY
Sbjct: 1687 SGAQEK--GHRGRSLVNENEVGVALQLYRRFRAVYGSGPQTSRGDDDEAGPKIGIITPYK 1744
Query: 761 AQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRV 820
AQ+ A+R + ++ + V+ + D FQG E DIII S P +
Sbjct: 1745 AQLQALRSRFSSQFGDDILQAVEFNTTDAFQGRECDIII--------------FSHPPHL 1790
Query: 821 NVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
NV LTRAR LWILG R L E W AL+ DAK R + D
Sbjct: 1791 NVGLTRARSSLWILGDSRALRQGE-FWHALIEDAKGRGEYTGGD 1833
>gi|325189081|emb|CCA23608.1| ATPdependent helicase putative [Albugo laibachii Nc14]
gi|325189673|emb|CCA24157.1| ATPdependent helicase putative [Albugo laibachii Nc14]
Length = 2194
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 190/359 (52%), Gaps = 36/359 (10%)
Query: 522 VRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTAS-SS 580
+ ++ L +LH + +EC +R + L NL T + +L +A++ T S +
Sbjct: 1693 ISRKELSRLHTKSTECFGRIRRMREELR--NLESTLTLAIL-----NKANIIACTLSKAG 1745
Query: 581 YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEA 640
+ S + + LVIDEAAQ E + IP++ + +L+GD QLPA V+S ++ +A
Sbjct: 1746 SGMFSSLPRGFDALVIDEAAQAVELSALIPIR-ERVARVILVGDPKQLPATVKSSLAAQA 1804
Query: 641 GFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGA-------NVKSKS 693
+ RSLFERL + +L +QYRMHP + FP+ +FY Q+ DG+ NV+
Sbjct: 1805 RYDRSLFERLVECGLTPSMLRVQYRMHPFMREFPSDRFYDGQLTDGSAVLQRMRNVRWNL 1864
Query: 694 YEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKI-LQKLYKAWVGSKQKV- 751
YE Y F + ++ E+ + S N E + + + L +A ++
Sbjct: 1865 YEHLY-----FQPFLLYHVETSSEESVNGSKCNRDEAKFCVDLCVSMLDEAGRNGAPRLT 1919
Query: 752 ---SIGVVSPYTAQVVAIRKKI---------GFEYENKDGFTVKVKSIDGFQGGEEDIII 799
SIG VSPY QV A+R+++ + +V+V ++DGFQG E+D+I+
Sbjct: 1920 SQWSIGFVSPYKEQVHALRRQVQRSVLSQWLATSPNAQAAVSVEVNTVDGFQGREKDMIV 1979
Query: 800 ISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQ 858
S+VR ++ G IGF+ +R+NVA+TRAR+CL+++G+ TL + W A V A+ RQ
Sbjct: 1980 FSSVRSSSRGGIGFLRDIRRLNVAITRARYCLFVVGNTNTL-KRDRTWAAFVKSAEDRQ 2037
>gi|452824582|gb|EME31584.1| dynamin GTPase [Galdieria sulphuraria]
Length = 1012
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/271 (37%), Positives = 142/271 (52%), Gaps = 19/271 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E ES +PL + G V +GD CQL +V SK + +AGFG+SLFERL +L
Sbjct: 619 VLIDEATQATEPESLLPL-IHGCKQVVFVGDHCQLGPVVTSKTAAKAGFGQSLFERLVAL 677
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L IQYRMHPS++ FP+ FY + +G + F +
Sbjct: 678 GIRPLRLTIQYRMHPSLTEFPSNMFYEGSLQNGITAAERKPSSVSFPWPVAAKPFFFYVQ 737
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G E+ S N VE AV KI+ K V ++ IGV++PY Q I
Sbjct: 738 TGPEEVSASGTSFLNRVEADAVEKIVSHFLKNGVDPQR---IGVITPYEGQRAFI----- 789
Query: 772 FEYENKDGFT-------VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
++ + G ++V S+D FQG E+D II+S VR N IGF+S P+R+NVAL
Sbjct: 790 VQHFLRSGTMRLELYKEIEVASVDAFQGREKDFIILSCVRSNEHQGIGFLSDPRRLNVAL 849
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAK 855
TRAR L ILG+ + L + + +W L+ K
Sbjct: 850 TRARFGLIILGNPKVL-AKKWLWACLLQHCK 879
Score = 43.1 bits (100), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 20/83 (24%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL--------RIKCR 308
LN SQ A+ A L S + L+ GPPGTGKT T + ++ L R K R
Sbjct: 441 LNPSQKAAVKAALE-------SPLSLVQGPPGTGKTVTSATIVYHLANNVKNITQRQKTR 493
Query: 309 -----TLACTPTNVAITELASRV 326
L C P+N+A+ +LA ++
Sbjct: 494 KCSRQILVCAPSNIAVDQLAEKI 516
>gi|344301641|gb|EGW31946.1| ATP-dependent helicase NAM7 [Spathaspora passalidarum NRRL Y-27907]
Length = 1000
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 146/276 (52%), Gaps = 11/276 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IP+ + G +L+GD QL ++ + + +AG +SLFERL L
Sbjct: 602 VLIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDRKAADAGLKQSLFERLVFL 660
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
H L +QYRMHP +S FP+ FY + +G + E T
Sbjct: 661 GHVPIRLEVQYRMHPCLSDFPSNMFYEGSLQNGVTSDDRLIEDATFPWPMVDTPMMFWAN 720
Query: 714 GGREDFIY--HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
GRE+ +S N VE V KI+ +L+K V Q IGV++PY Q + + +
Sbjct: 721 YGREELSSSGNSFLNRVEAMNVEKIITRLFKDGVTPDQ---IGVITPYEGQRAYLVQFMS 777
Query: 772 FE---YENKDGF-TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ +D + V++ S+D FQG E+D II+S VR N SIGF+S P+R+NVALTRA
Sbjct: 778 MNSTLLDKRDQYLDVEITSVDAFQGREKDFIILSCVRANDAQSIGFLSDPRRLNVALTRA 837
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
++ L +LG+ R L + +W L+ + + C +
Sbjct: 838 KYGLIVLGNPRALCRNR-LWNCLLVHFREKGCLVDG 872
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ ++ + ++F + LN SQ A+ L+R + LI GPPGTGKT T
Sbjct: 419 EVVPIEFDTELPQRFSHPALTELNVSQTNAVRTVLQR-------PLSLIQGPPGTGKTVT 471
Query: 295 VSMLLLTLLRI-KCRTLACTPTNVAITELASRV----LKLVKESYK 335
+ ++ L ++ K + L C P+NVA+ LA ++ LK+V+ + K
Sbjct: 472 SATIIYHLSKLNKEKILVCAPSNVAVDHLAEKLDLLGLKVVRLTAK 517
>gi|46136829|ref|XP_390106.1| RNT1_NEUCR Regulator of nonsense transcripts 1 homolog [Gibberella
zeae PH-1]
Length = 1083
Score = 155 bits (391), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/275 (38%), Positives = 151/275 (54%), Gaps = 17/275 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL +L
Sbjct: 610 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVNL 668
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGA---NVKSKSYEKQYLTGTEFGTYSFI 710
S LNIQYRMHP +S FP+ FY + +G N K + + G E +
Sbjct: 669 KLSPIRLNIQYRMHPCLSEFPSNMFYDGSLQNGVTHENRLRKDVDFPWPVG-EMPMMFWS 727
Query: 711 NIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVA 765
N+ G E+ N E S V K + + +KA V + IGV++PY Q +V
Sbjct: 728 NL--GHEEISASGTSYLNRTEASNVEKAVTRFFKAGV---KPADIGVITPYEGQRSYIVT 782
Query: 766 IRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALT 825
+ G Y+ + V+V S+D FQG E+D I++S VR N IGF+S P+R+NVALT
Sbjct: 783 TMQNSG-TYKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALT 841
Query: 826 RARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
RA++ L ILG+ + L S +W L+ K R+CF
Sbjct: 842 RAKYGLVILGNPKVL-SKHELWHNLLVHFKDRKCF 875
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 12/84 (14%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC-RTLACTPT 315
LN SQVGA+ A L++ + LI GPPGTGKT T + ++ L ++ + L C P+
Sbjct: 448 LNPSQVGAIKAVLQKP-------LSLIQGPPGTGKTVTSATIIYHLAKMSGNQVLVCAPS 500
Query: 316 NVAITELASRV----LKLVKESYK 335
NVA+ +L RV LK+V+ + K
Sbjct: 501 NVAVDQLCERVHRTGLKVVRLTAK 524
>gi|346326262|gb|EGX95858.1| nonsense transcript regulator [Cordyceps militaris CM01]
Length = 1084
Score = 155 bits (391), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/278 (38%), Positives = 150/278 (53%), Gaps = 23/278 (8%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 609 VLIDESTQSAEPECIIPLML-GCKQVVLVGDHKQLGPVIMNKKAAKAGLSQSLFERLMQL 667
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFG------TY 707
LLN QYRMHP +S FP+ FY + +G + E++ +F
Sbjct: 668 RLQPILLNTQYRMHPCLSEFPSNMFYDGSLQNGV-----TQEQRIRKDVDFPWPVAEMPM 722
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---V 763
F + IG E S N E S V KI+ + +KA V + IGV++PY Q +
Sbjct: 723 MFWSNIGNEEISTSGTSYLNRTEASNVEKIVTRFFKAGV---KPAEIGVITPYEGQRSYI 779
Query: 764 VAIRKKIGFEYENKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNV 822
V + G KD + V+V S+D FQG E+D I++S VR N IGF+S P+R+NV
Sbjct: 780 VTTMQNSG--TSKKDLYKGVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRRLNV 837
Query: 823 ALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
ALTRA++ L ILG+ R L S +W L+ + R+CF
Sbjct: 838 ALTRAKYGLVILGNPRVL-SKHELWYNLLTHFRDRRCF 874
Score = 51.2 bits (121), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 12/84 (14%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC-RTLACTPT 315
LN+SQV A+ + L++ + LI GPPGTGKT T + ++ L ++ + L C P+
Sbjct: 447 LNQSQVDAIRSVLQKP-------LSLIQGPPGTGKTVTSATIIYHLSKMSGNQVLVCAPS 499
Query: 316 NVAITELASRV----LKLVKESYK 335
NVA+ +L R+ LK+V+ + K
Sbjct: 500 NVAVDQLCERIHRTGLKVVRLTAK 523
>gi|408397555|gb|EKJ76696.1| hypothetical protein FPSE_03107 [Fusarium pseudograminearum CS3096]
Length = 1083
Score = 155 bits (391), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/275 (38%), Positives = 151/275 (54%), Gaps = 17/275 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL +L
Sbjct: 610 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVNL 668
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGA---NVKSKSYEKQYLTGTEFGTYSFI 710
S LNIQYRMHP +S FP+ FY + +G N K + + G E +
Sbjct: 669 KLSPIRLNIQYRMHPCLSEFPSNMFYDGSLQNGVTHENRLRKDVDFPWPVG-EMPMMFWS 727
Query: 711 NIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVA 765
N+ G E+ N E S V K + + +KA V + IGV++PY Q +V
Sbjct: 728 NL--GHEEISASGTSYLNRTEASNVEKAVTRFFKAGV---KPADIGVITPYEGQRSYIVT 782
Query: 766 IRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALT 825
+ G Y+ + V+V S+D FQG E+D I++S VR N IGF+S P+R+NVALT
Sbjct: 783 TMQNSG-TYKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALT 841
Query: 826 RARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
RA++ L ILG+ + L S +W L+ K R+CF
Sbjct: 842 RAKYGLVILGNPKVL-SKHELWHNLLVHFKDRKCF 875
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 12/84 (14%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC-RTLACTPT 315
LN SQVGA+ A L++ + LI GPPGTGKT T + ++ L ++ + L C P+
Sbjct: 448 LNPSQVGAIKAVLQKP-------LSLIQGPPGTGKTVTSATIIYHLAKMSGNQVLVCAPS 500
Query: 316 NVAITELASRV----LKLVKESYK 335
NVA+ +L RV LK+V+ + K
Sbjct: 501 NVAVDQLCERVHRTGLKVVRLTAK 524
>gi|342879017|gb|EGU80294.1| hypothetical protein FOXB_09221 [Fusarium oxysporum Fo5176]
Length = 1083
Score = 155 bits (391), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/275 (38%), Positives = 151/275 (54%), Gaps = 17/275 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL +L
Sbjct: 610 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVNL 668
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGA---NVKSKSYEKQYLTGTEFGTYSFI 710
S LNIQYRMHP +S FP+ FY + +G N K + + G E +
Sbjct: 669 KLSPIRLNIQYRMHPCLSEFPSNMFYDGSLQNGVTHENRLRKDVDFPWPVG-EMPMMFWS 727
Query: 711 NIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVA 765
N+ G E+ N E S V K + + +KA V + IGV++PY Q +V
Sbjct: 728 NL--GHEEISASGTSYLNRTEASNVEKAVTRFFKAGV---KPADIGVITPYEGQRSYIVT 782
Query: 766 IRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALT 825
+ G Y+ + V+V S+D FQG E+D I++S VR N IGF+S P+R+NVALT
Sbjct: 783 TMQNSG-TYKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALT 841
Query: 826 RARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
RA++ L ILG+ + L S +W L+ K R+CF
Sbjct: 842 RAKYGLVILGNPKVL-SKHELWHNLLVHFKDRKCF 875
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 12/84 (14%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC-RTLACTPT 315
LN SQVGA+ A L++ + LI GPPGTGKT T + ++ L ++ + L C P+
Sbjct: 448 LNPSQVGAIKAVLQKP-------LSLIQGPPGTGKTVTSATIIYHLAKMSGNQVLVCAPS 500
Query: 316 NVAITELASRV----LKLVKESYK 335
NVA+ +L RV LK+V+ + K
Sbjct: 501 NVAVDQLCERVHRTGLKVVRLTAK 524
>gi|242061504|ref|XP_002452041.1| hypothetical protein SORBIDRAFT_04g017405 [Sorghum bicolor]
gi|241931872|gb|EES05017.1| hypothetical protein SORBIDRAFT_04g017405 [Sorghum bicolor]
Length = 157
Score = 154 bits (390), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 106/196 (54%), Gaps = 41/196 (20%)
Query: 664 YRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYH- 722
YRMHP IS FP FY ++ DG NV K Y K +L G YSFINI G E H
Sbjct: 1 YRMHPEISKFPVSTFYDGKLSDGLNVSHKDYNKMFLAGKLLRPYSFINIDGSHETNEKHG 60
Query: 723 -SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFT 781
S +N VEV A++ I+Q+L K
Sbjct: 61 RSLKNSVEVDAIVLIVQRLLK--------------------------------------- 81
Query: 782 VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLI 841
VK+KS+DGFQG EED+IIISTVR N GS+GF+S QR NVALTRA+HCLWI+G+ TL
Sbjct: 82 VKIKSVDGFQGAEEDVIIISTVRSNGAGSVGFLSNLQRTNVALTRAKHCLWIVGNGTTLF 141
Query: 842 SSESIWGALVCDAKAR 857
+S SIW +V D R
Sbjct: 142 NSNSIWQKIVKDTWDR 157
>gi|281208036|gb|EFA82214.1| DNA2/NAM7 helicase family protein [Polysphondylium pallidum PN500]
Length = 864
Score = 154 bits (390), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 155/290 (53%), Gaps = 30/290 (10%)
Query: 560 LVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHA 619
LVLED +L FS +S K++ +I ++IDEAAQ E+ + +P+Q
Sbjct: 490 LVLEDAEIIATTLSFSGSSILMKMNGFDI-----VIIDEAAQAVETSTLVPMQ-HKCKKI 543
Query: 620 VLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFY 679
VL+GD QLPA + S I+ + + +SLF+RL + H+L QYRMH SI FP+ FY
Sbjct: 544 VLVGDPKQLPATIISPIAIKQKYDQSLFQRLQE-KRTPHMLTTQYRMHSSIRAFPSKHFY 602
Query: 680 RNQILDGANVKSKSYEKQYLTGTEFGTYSFINI-------IGGREDFIYHSCRNIVEVSA 732
+ + DG N+ S++ Y FG F ++ GG F CR
Sbjct: 603 NDLLEDGPNIPSRA--TNYHANPFFGPLIFYDLSFSVETKPGGGSVFNEDECR------M 654
Query: 733 VIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQG 792
+++ Q L K + IG++SPY QV+++R+ ++N G + + ++DGFQG
Sbjct: 655 ALQLYQLLLKTYPDELFSGRIGIISPYRQQVLSLREY----FKNYSG--ISIDTVDGFQG 708
Query: 793 GEEDIIIISTVRCNT--GGSIGFISKPQRVNVALTRARHCLWILGSERTL 840
E +III S VR G IGF++ +R+NVALTR R L I+G+ ++L
Sbjct: 709 REREIIIFSCVRAPAEKGAGIGFLADVRRMNVALTRPRSSLLIIGNSKSL 758
>gi|430813344|emb|CCJ29314.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1924
Score = 154 bits (390), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/265 (35%), Positives = 154/265 (58%), Gaps = 6/265 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT-S 652
++IDEAAQ E + IPL+ G +L+GD QLP V S+++ + +SLF R+ +
Sbjct: 1541 VIIDEAAQCIELSTIIPLRY-GCKLCILVGDPNQLPPTVFSQMATNYSYEQSLFVRMQKN 1599
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
S H+L+IQYRMHP IS FP+ FY N++++ ++ K+ ++ + FG Y F +I
Sbjct: 1600 CPSSVHMLSIQYRMHPCISQFPSKFFYSNRLINDEGIEEKT-KRSWHQVDLFGPYRFFDI 1658
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGF 772
G ED S N++E A + I + +++ G+++PY Q+ I++
Sbjct: 1659 -HGYEDETSRSPFNLMEARATLLIYDAIIRSFPSINFNGYFGIITPYKQQLNKIKELFIK 1717
Query: 773 EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLW 832
+Y + + ++DGFQG E+DII++S VR + G IGF+S +R+NV+LTRA+ +
Sbjct: 1718 KYGDSILKNIDFNTVDGFQGQEKDIIMLSCVRSSAKG-IGFLSDIRRMNVSLTRAKSSMI 1776
Query: 833 ILGSERTLISSESIWGALVCDAKAR 857
ILG+ TL S W +L+ DA+ R
Sbjct: 1777 ILGNVETL-SGHFYWRSLIEDAEQR 1800
>gi|449464902|ref|XP_004150168.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 1
homolog [Cucumis sativus]
Length = 1246
Score = 154 bits (390), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 149/281 (53%), Gaps = 29/281 (10%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G AVL+GD CQL ++ K + AG +SLFERL L
Sbjct: 647 VLIDESTQATEPECLIPLVL-GAKQAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 705
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF-----GTYS 708
L +QYRMHPS+S FP+ FY + +G + E+Q TG +F
Sbjct: 706 GVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTIN----ERQS-TGIDFPWPVPNRPM 760
Query: 709 FINIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
F + G+E+ N E + V KI+ ++ V Q IGV++PY Q I
Sbjct: 761 FFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ---IGVITPYEGQRAYI 817
Query: 767 RKKIGFEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQR 819
Y +++G ++V S+D FQG E+D II+S VR N IGF++ P+R
Sbjct: 818 -----VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 872
Query: 820 VNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
+NVALTRAR+ + ILG+ + L S + +W +L+ K +C
Sbjct: 873 LNVALTRARYGIVILGNPKVL-SKQPLWNSLLTHYKEHECL 912
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 12/102 (11%)
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-K 306
+FG LN SQV A+ + L++ + LI GPPGTGKT T + ++ + + +
Sbjct: 474 RFGAPGLPELNASQVFAVKSVLQKP-------ISLIQGPPGTGKTVTSAAIVYHMAKQGQ 526
Query: 307 CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ L C P+NVA+ +LA ++ LK+V+ K ++P+
Sbjct: 527 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 568
>gi|118388103|ref|XP_001027152.1| phage head-tail adaptor, putative family protein [Tetrahymena
thermophila]
gi|89308922|gb|EAS06910.1| phage head-tail adaptor, putative family protein [Tetrahymena
thermophila SB210]
Length = 1112
Score = 154 bits (389), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 163/305 (53%), Gaps = 19/305 (6%)
Query: 567 FKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDEC 626
+ A + ST SS +I+ ++IDEA Q E E +P+ L G H +L+GD
Sbjct: 585 LRNAEVICSTCISSADPRLKDIR-FKHVLIDEATQAIEPECLLPM-LKGAKHVILVGDHR 642
Query: 627 QLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG 686
QL +V + + +AG +SLFER+ S+ L +QYRMHP +S+FP+ FY + +G
Sbjct: 643 QLGPVVTCRDTAKAGLNKSLFERMVSMGIRPIRLQVQYRMHPDLSIFPSNTFYEGTLQNG 702
Query: 687 ANVKSKSYEKQYLTGTEFGTYSFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWV 745
+ + ++ + F+N G E S N E + + I+ +L KA V
Sbjct: 703 VTFNDRQFHGEFPWPNKNKPLMFLNSCGVEEISSSGTSYLNRQETALIEDIVFRLIKAKV 762
Query: 746 GSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDG-------FTVKVKSIDGFQGGEEDII 798
+Q IG+++PY Q R IG +Y +K+G +++ S+DGFQG E+D I
Sbjct: 763 KPEQ---IGIITPYKGQ----RFYIG-DYLSKNGRLNHVLYRQIEIASVDGFQGREKDYI 814
Query: 799 IISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQ 858
IIS VR N IGF++ P+R+NVA+TRAR+ L I+G+ + L + +++W L+ K +
Sbjct: 815 IISCVRSNECQGIGFLTDPRRLNVAITRARYGLIIVGNAKVL-ARDNLWNNLLNHMKENK 873
Query: 859 CFFNA 863
+
Sbjct: 874 VLVDG 878
Score = 47.8 bits (112), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLR------IKCRTL 310
LN QV A+ L++ C LI GPPGTGKT T + ++ L++ + + L
Sbjct: 442 LNYYQVEAVKKALQQPLC-------LIQGPPGTGKTFTSTAIIYHLVKNIQKSGQRGQVL 494
Query: 311 ACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDR 358
C P+N+ + +LA R+ + + + SRS I + L N+ R
Sbjct: 495 VCAPSNIVVDQLAERIHQAGIKVVRMCSRSREMISSSVEFLTLHNQVR 542
>gi|448086434|ref|XP_004196100.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
gi|359377522|emb|CCE85905.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
Length = 958
Score = 154 bits (389), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 148/276 (53%), Gaps = 11/276 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IP+ + G +L+GD QL ++ K + +AG +SLFERL L
Sbjct: 569 VLIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILEKRAGDAGLKQSLFERLVVL 627
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
H L +QYRM+P +S FP+ FY + +G K + +
Sbjct: 628 GHVPIRLEVQYRMNPCLSEFPSNMFYEGSLQNGVTTKERLIKNASFPWPVIDHPMMFWAN 687
Query: 714 GGREDFIY--HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
GRE+ HS N VE V KI+ +L+K +G +Q IGV++PY Q + + +
Sbjct: 688 YGREEISGSGHSFLNRVEAMNVEKIITRLFKDGIGPEQ---IGVITPYEGQRAYLIQYMS 744
Query: 772 FE---YENKDGF-TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
E KD + V++ S+D FQG E+D II+S VR N +IGF+S +R+NVALTRA
Sbjct: 745 INSTLTEMKDRYLEVEITSVDAFQGREKDFIILSCVRANDQQTIGFLSDSRRLNVALTRA 804
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
++ L ILG+ R L + ++W L+ + + C +
Sbjct: 805 KYGLVILGNPRALCRN-TLWNHLLVHFREKGCLVDG 839
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 12/86 (13%)
Query: 255 STLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACT 313
+ LN SQ A+ + L+R + LI GPPGTGKT T + ++ L ++ K R L C
Sbjct: 406 TELNSSQTNAVKSVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKLHKKRILVCA 458
Query: 314 PTNVAITELASRV----LKLVKESYK 335
P+NVA+ LA+++ LK+V+ + K
Sbjct: 459 PSNVAVDHLANKLNLLGLKVVRLTAK 484
>gi|448081930|ref|XP_004195009.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
gi|359376431|emb|CCE87013.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
Length = 959
Score = 154 bits (388), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 148/276 (53%), Gaps = 11/276 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IP+ + G +L+GD QL ++ K + +AG +SLFERL L
Sbjct: 569 VLIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILEKRAGDAGLKQSLFERLVVL 627
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
H L +QYRM+P +S FP+ FY + +G K + +
Sbjct: 628 GHVPIRLEVQYRMNPCLSEFPSNMFYEGSLQNGVTTKERLIKNASFPWPVIDHPMMFWAN 687
Query: 714 GGREDFIY--HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
GRE+ HS N VE V KI+ +L+K +G +Q IGV++PY Q + + +
Sbjct: 688 YGREEISGSGHSFLNRVEAMNVEKIITRLFKDGIGPEQ---IGVITPYEGQRAYLIQYMS 744
Query: 772 FE---YENKDGF-TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
E KD + V++ S+D FQG E+D II+S VR N +IGF+S +R+NVALTRA
Sbjct: 745 INSTLTEMKDRYLEVEITSVDAFQGREKDFIILSCVRANDQQTIGFLSDSRRLNVALTRA 804
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
++ L ILG+ R L + ++W L+ + + C +
Sbjct: 805 KYGLVILGNPRALCRN-TLWNHLLVHFREKGCLVDG 839
Score = 53.1 bits (126), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 12/86 (13%)
Query: 255 STLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACT 313
+ LN SQ A+ + L+R + LI GPPGTGKT T + ++ L ++ K R L C
Sbjct: 406 TELNSSQTNAVKSVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKLHKKRILVCA 458
Query: 314 PTNVAITELASRV----LKLVKESYK 335
P+NVA+ LA+++ LK+V+ + K
Sbjct: 459 PSNVAVDHLANKLNLLGLKVVRLTAK 484
>gi|171693713|ref|XP_001911781.1| hypothetical protein [Podospora anserina S mat+]
gi|170946805|emb|CAP73609.1| unnamed protein product [Podospora anserina S mat+]
Length = 1090
Score = 154 bits (388), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/272 (36%), Positives = 149/272 (54%), Gaps = 11/272 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 609 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKL 667
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
N LN+QYRMHP +S FP+ FY + +G + + + + F +
Sbjct: 668 NLVPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTITERLRKDVDFPWPVAETPMMFWSN 727
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRK 768
+G E S N E S V KI+ + +KA V + IGV++PY Q +V+ +
Sbjct: 728 LGNEEISASGTSYLNRTEASNVEKIVTRFFKAGV---KPSDIGVITPYEGQRSYIVSTMQ 784
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
G ++ + V+V S+D FQG E+D I++S VR N IGF+S P+R+NVALTRA+
Sbjct: 785 NTG-TFKKESYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALTRAK 843
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCF 860
+ L I+G+ + L S +W L+ K R+C
Sbjct: 844 YGLVIIGNPKVL-SKHELWHHLLVHFKDRKCL 874
Score = 53.1 bits (126), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 12/106 (11%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ K Q ++F LN SQ+ A+ L + + LI GPPGTGKT T
Sbjct: 425 EVAVAPMKTQMPKRFHVPGLPELNHSQITAIKTVLS-------TPLSLIQGPPGTGKTVT 477
Query: 295 VSMLLLTLLRI-KCRTLACTPTNVAITELASRV----LKLVKESYK 335
+ ++ L R+ + L C P+NVA+ +L R+ LK+V+ + K
Sbjct: 478 SATIIYHLARMNNSQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAK 523
>gi|325184899|emb|CCA19391.1| RNA helicase putative [Albugo laibachii Nc14]
Length = 1058
Score = 154 bits (388), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 141/267 (52%), Gaps = 19/267 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E E IP+ + G H V++GD CQL +V +K + AG +SLF+RL L
Sbjct: 613 VLIDEATQATEPECLIPI-VQGAKHVVMVGDHCQLGPVVMNKRAASAGLNQSLFDRLLKL 671
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
+H L +QYRMHP +S FP+ FY ++ +G + + + +F I
Sbjct: 672 DHRPFRLRVQYRMHPCLSEFPSNTFYEGELQNGVSSTERQLKNVDFPWPNPNKPTFFYIC 731
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G E+ S N E S V KI+ K V Q IGV++PY Q +
Sbjct: 732 LGAEEISSSGTSYLNRTEASNVEKIVTAFLKCGVLPAQ---IGVITPYEGQRAYV----- 783
Query: 772 FEYENKDGFT-------VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
Y ++G V+V S+D FQG E+D+II+S VR N IGF+S +R+NVAL
Sbjct: 784 VNYMQRNGSMRAQLYKDVEVASVDSFQGREKDLIILSCVRSNENQGIGFLSDRRRLNVAL 843
Query: 825 TRARHCLWILGSERTLISSESIWGALV 851
TRA++ + ILG+ R L E +W L+
Sbjct: 844 TRAKYGVIILGNPRVLAKQE-LWNRLL 869
>gi|400597184|gb|EJP64919.1| Regulator of nonsense transcripts 1 [Beauveria bassiana ARSEF 2860]
Length = 1083
Score = 154 bits (388), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/276 (37%), Positives = 149/276 (53%), Gaps = 19/276 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 609 VLIDESTQSAEPECIIPLML-GCKQVVLVGDHKQLGPVIMNKKAAKAGLSQSLFERLMQL 667
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFG------TY 707
LLN QYRMHP +S FP+ FY + +G + E++ +F
Sbjct: 668 RLQPILLNTQYRMHPCLSEFPSNMFYDGSLQNGV-----TQEQRIRKDVDFPWPVAEMPM 722
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
F + IG E S N E S V KI+ + +KA V + IGV++PY Q I
Sbjct: 723 MFWSNIGNEEISTSGTSYLNRTEASNVEKIVTRFFKAGVKPSE---IGVITPYEGQRSYI 779
Query: 767 RKKIGFEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
+ +K + +V+V S+D FQG E+D I++S VR N IGF+S P+R+NVAL
Sbjct: 780 VTTMQNAGTSKKEYYKSVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRRLNVAL 839
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
TRA++ + ILG+ R L S +W L+ + R+CF
Sbjct: 840 TRAKYGVVILGNPRVL-SKHELWYNLLTHFRDRRCF 874
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 12/84 (14%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC-RTLACTPT 315
LN+SQV A+ + L++ + LI GPPGTGKT T + ++ L +I + L C P+
Sbjct: 447 LNQSQVDAIRSVLQKP-------LSLIQGPPGTGKTVTSATIIYHLSKISGNQVLVCAPS 499
Query: 316 NVAITELASRV----LKLVKESYK 335
NVA+ +L R+ LK+V+ + K
Sbjct: 500 NVAVDQLCERIHRTGLKVVRLTAK 523
>gi|428177002|gb|EKX45884.1| hypothetical protein GUITHDRAFT_159666 [Guillardia theta CCMP2712]
Length = 1030
Score = 154 bits (388), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 142/276 (51%), Gaps = 19/276 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DE Q E E IP+ + G VL+GD CQL +V K + +AG +SLFER+ +L
Sbjct: 631 VLVDECTQATEPECLIPIAM-GAKQLVLVGDHCQLGPVVMCKKAAKAGLQQSLFERMVNL 689
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + I
Sbjct: 690 GVKPVRLQVQYRMHPILSEFPSNTFYEGTLQNGVTHAERHAHAIDFPWPVASKPMMFYIS 749
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G E+ N E S V KI+ + K V +Q IG+++PY Q I
Sbjct: 750 TGAEELSASGTSYLNRTEASNVEKIVTRFLKGGVVPEQ---IGIITPYEGQRAYI----- 801
Query: 772 FEYENKDGFTVK-------VKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
+Y +++G K V S+D FQG E+D II+S VR N G SIGF++ P+R+NVAL
Sbjct: 802 VQYMSRNGSLRKQLYNELEVASVDAFQGREKDFIILSCVRSNEGKSIGFVNNPRRLNVAL 861
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
TRAR+ + ILG+ + L + + +W L+C K +C
Sbjct: 862 TRARYGVVILGNPKVL-AKQPLWNNLLCHFKQHECL 896
>gi|440632949|gb|ELR02868.1| regulator-nonsense transcripts 1 [Geomyces destructans 20631-21]
Length = 1099
Score = 154 bits (388), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/273 (38%), Positives = 150/273 (54%), Gaps = 13/273 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 613 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 671
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
+ LN+QYRMHP +S FP+ FY + +G ++ + + + F +
Sbjct: 672 GLAPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTMQQRLRRDVDFPWPVGDTPMMFWSN 731
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRK 768
+G E S N E S V KI+ + +KA V Q IGV++PY Q VV+ +
Sbjct: 732 LGNEEISASGTSYLNRTEASNVEKIVTRFFKAGV---QPADIGVITPYEGQRSYVVSSMQ 788
Query: 769 KIG-FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
G F+ EN ++V S+D FQG E+D I++S VR N IGF+S P+R+NVALTRA
Sbjct: 789 NTGTFKKENYK--EIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRA 846
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCF 860
++ L ILG+ + L S +W L+ K R C
Sbjct: 847 KYGLVILGNPKVL-SKHPLWHYLLQHFKERNCL 878
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q +KF LN SQ+ A+ + L++ + LI GPPGTGKT T
Sbjct: 429 EVAAAPMKIQMPKKFSVPGLPELNGSQINAVKSVLQKP-------LSLIQGPPGTGKTVT 481
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYK 335
+ ++ L ++ + L C P+NVA+ +L R+ LK+V+ + K
Sbjct: 482 SATVIYHLSKVNGGQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAK 527
>gi|449511522|ref|XP_004163978.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Cucumis
sativus]
Length = 1268
Score = 153 bits (387), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 149/281 (53%), Gaps = 29/281 (10%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G AVL+GD CQL ++ K + AG +SLFERL L
Sbjct: 647 VLIDESTQATEPECLIPLVL-GAKQAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 705
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF-----GTYS 708
L +QYRMHPS+S FP+ FY + +G + E+Q TG +F
Sbjct: 706 GVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTIN----ERQS-TGIDFPWPVPNRPM 760
Query: 709 FINIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
F + G+E+ N E + V KI+ ++ V Q IGV++PY Q I
Sbjct: 761 FFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ---IGVITPYEGQRAYI 817
Query: 767 RKKIGFEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQR 819
Y +++G ++V S+D FQG E+D II+S VR N IGF++ P+R
Sbjct: 818 -----VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 872
Query: 820 VNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
+NVALTRAR+ + ILG+ + L S + +W +L+ K +C
Sbjct: 873 LNVALTRARYGIVILGNPKVL-SKQPLWNSLLTHYKEHECL 912
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 12/102 (11%)
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-K 306
+FG LN SQV A+ + L++ + LI GPPGTGKT T + ++ + + +
Sbjct: 474 RFGAPGLPELNASQVFAVKSVLQKP-------ISLIQGPPGTGKTVTSAAIVYHMAKQGQ 526
Query: 307 CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ L C P+NVA+ +LA ++ LK+V+ K ++P+
Sbjct: 527 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 568
>gi|326677548|ref|XP_690945.4| PREDICTED: probable helicase senataxin [Danio rerio]
Length = 2310
Score = 153 bits (387), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 113/308 (36%), Positives = 159/308 (51%), Gaps = 42/308 (13%)
Query: 589 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
+P + ++IDEA+Q KE+E+ IP+ L +L+GD QLP V S+ + E GF +SL
Sbjct: 1867 EPFSCVIIDEASQAKETETLIPM-LYRCPSVILVGDPNQLPPTVVSQKAKEFGFDQSLMA 1925
Query: 649 RLTSLNHSKH-------LLNIQYRMHPSISLFPNLQFYRNQI------------------ 683
RL H + LL++QYRMHP I FP+ Y + +
Sbjct: 1926 RLCKSLHPSNSKLPPILLLSMQYRMHPDICEFPSKYIYNSALKNDWQGQCRQEQEIRTVS 1985
Query: 684 -------LDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKI 736
L G V ++ +K+ F Y +++ GRE S N EVS V +
Sbjct: 1986 EFRLLRSLSGPCV-CETAQKRCSLSWPFKPYKVFDVMDGRETKERDSFINHKEVSLVGLL 2044
Query: 737 LQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEED 796
L+ L K +Q V +GV++PY AQ I I NK V+V ++DGFQG E D
Sbjct: 2045 LKLLCK-----EQAVRVGVITPYNAQKHRILDAIKTSGINKQ-LQVEVDTVDGFQGREMD 2098
Query: 797 IIIISTVRCNTG-GSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAK 855
II+S VR ++ GSIGF+ QR+NV +TRA+ L+ILG RTL +S WGAL+ DA
Sbjct: 2099 CIIVSCVRASSEMGSIGFVGNRQRMNVTITRAKFSLFILGHLRTL-REQSDWGALIEDAG 2157
Query: 856 ARQCFFNA 863
R+C N
Sbjct: 2158 RRECIINT 2165
Score = 47.8 bits (112), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 19/110 (17%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRI----------------KCRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL + R L C P+N AI L +
Sbjct: 1655 LIHGPPGTGKSKTIGGLLYKLLSSATNSSATVGNLHSKSRRTRVLLCAPSNAAIDSLMKK 1714
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIK 375
V+ + KE + N P GDI L + ++ + L+++ K
Sbjct: 1715 VILIFKEKCR---NINAPQGNCGDINLVRLGNERTISKSLKPFSLDHQTK 1761
>gi|294896732|ref|XP_002775704.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
gi|239881927|gb|EER07520.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
Length = 674
Score = 153 bits (387), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 139/257 (54%), Gaps = 18/257 (7%)
Query: 595 VIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLN 654
+IDEA Q E + IPL+L G+ VL+GD QLPA V S + + RSLFERL
Sbjct: 373 IIDEACQAIEPSALIPLKLRGVKRLVLVGDPQQLPATVVSMEAKALRYERSLFERLIGAG 432
Query: 655 HSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIG 714
HLL+ QYRM P I+ F + +FY DG ++S G F++
Sbjct: 433 WKAHLLDEQYRMLPEIANFASKEFY-----DGRLKTAESCRFPSSLGQPLRPLLFLDSRL 487
Query: 715 GREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEY 774
G E S N E V K+++ + + +K+S+GVV+PY Q + IR+ +
Sbjct: 488 GSEQRGGTSLVNTEEAIIVGKMVEAV------ANRKLSVGVVTPYRQQALLIRRTVSMS- 540
Query: 775 ENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWIL 834
+V ++D +QG E+DIII+S VR N G IGF++ +R+NV+LTRA++ LWI+
Sbjct: 541 ------GAEVDTVDAYQGQEKDIIIMSCVRSNRDGGIGFVADYRRLNVSLTRAKYALWIV 594
Query: 835 GSERTLISSESIWGALV 851
G+ +L S +W L+
Sbjct: 595 GNAESLGRSSKVWADLI 611
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 26/149 (17%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTN 316
LN++Q+ A+ + S + L+ GPPGTGKTKT+ ++ LL+ + C P+N
Sbjct: 155 LNQAQLRAVTSA-----ADVSSPITLVQGPPGTGKTKTIVAMVKALLKTTNTLVICAPSN 209
Query: 317 VAITELASRVLK--------------LVKESYKRDSRSNTPICPLGDILLFGNKDRLKVN 362
A+ ELASR++ L S +R +R L ++ G ++++
Sbjct: 210 AAVDELASRIMASWPPSKSLSDAHQVLRVGSCRRITREEVKTISLEELAKTGGREKVYEL 269
Query: 363 PGF-----EEIYLNYRIKKLRECFAPLSG 386
GF EEI I+KL E L+G
Sbjct: 270 RGFHKEKREEIL--KEIRKLEEGIKELTG 296
>gi|452846946|gb|EME48878.1| hypothetical protein DOTSEDRAFT_117955, partial [Dothistroma
septosporum NZE10]
Length = 1788
Score = 153 bits (387), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 149/266 (56%), Gaps = 7/266 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS- 652
++IDEAAQ E ES IPL+ G +++GD QLP V SK + + + +SLF R+ +
Sbjct: 1528 VIIDEAAQCVEMESLIPLKY-GCVKCIMVGDPNQLPPTVFSKEAQKFQYEQSLFVRMQNN 1586
Query: 653 -LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
NH HLL+ QYRMHP IS FP+ FY +++DG N+ ++ ++ + Y F +
Sbjct: 1587 FPNHV-HLLDTQYRMHPDISFFPSETFYDRKLMDGPNM-AELRKQPWHASALLAPYRFFD 1644
Query: 712 IIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
+ G++ S N+ E+ + + ++ + IG+++PY +Q+ ++++
Sbjct: 1645 V-AGQQQTSAKSFINLAEIDIAMLLYDRVRADFSELDWNNKIGIITPYKSQLRELKRRFA 1703
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
+Y ++ + D FQG E +III S VR + G IGF+ +R+NV LTRA+ L
Sbjct: 1704 NKYGEGIQDFIEFNTTDAFQGRECEIIIFSCVRASPAGGIGFLQDIRRMNVGLTRAKSSL 1763
Query: 832 WILGSERTLISSESIWGALVCDAKAR 857
W+LG+ +L S W LV +AKAR
Sbjct: 1764 WVLGNSESL-SRGRYWKLLVDNAKAR 1788
>gi|340504056|gb|EGR30545.1| hypothetical protein IMG5_129630 [Ichthyophthirius multifiliis]
Length = 801
Score = 153 bits (387), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 122/381 (32%), Positives = 194/381 (50%), Gaps = 42/381 (11%)
Query: 482 VALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVL 541
V + LLD G F +N + + + F ++ E IS + K+ L +++ R E ++
Sbjct: 417 VKSEGLLDKNGKQYFPNNNMIVRIGENFDRAL-EDISLEYQVKQKLGEMNLRAEEAENIR 475
Query: 542 RNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNF----LVID 597
+ + L E + C T S+A S ++S NF ++ID
Sbjct: 476 KKI---LQEAKIICGT----------------LSSAGSQLLINS------NFYFDTVIID 510
Query: 598 EAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSK 657
EAAQ E + IPLQ +LIGD QLPA + SK ++ + +SLFERL +
Sbjct: 511 EAAQAAEISTLIPLQYH-CKRLILIGDPNQLPATIFSKKCEKFNYDQSLFERLMKCGLNV 569
Query: 658 HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRE 717
++L QYRM+P IS F + FY +I D +K ++ F +N+ G E
Sbjct: 570 YMLKQQYRMNPIISKFISNTFYEGKIDDAQKIKEIVGNPEFYQFRIFSPIVVLNV-NGNE 628
Query: 718 DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENK 777
F S +N E A+++I +L K + S +G+++PY++QV IR+KI +++
Sbjct: 629 IFHKSSYKNEEESEAIVEIYAQLKKRF-PSFDLTQLGIITPYSSQVSEIRRKIK-QFDGT 686
Query: 778 DGFTVKVKSIDGFQGGEEDIIIISTVRC-------NTGGSIGFISKPQRVNVALTRARHC 830
D V+V ++DGFQG E+DIII STVR N +IGF++ +R+NV+L+RAR
Sbjct: 687 DKCLVEVHTVDGFQGREKDIIIFSTVRASIQNGVKNNKKTIGFLNDKRRMNVSLSRARLS 746
Query: 831 LWILGSERTLISSESIWGALV 851
L ++G + L S+ +W L
Sbjct: 747 LIVVGDLKQLKYSK-LWKGLA 766
>gi|388853403|emb|CCF53023.1| related to SEN1 protein [Ustilago hordei]
Length = 2314
Score = 153 bits (387), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 149/269 (55%), Gaps = 10/269 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL-TS 652
+VIDEAAQ E + IPL+ G +++GD QLP V S+ +D+ G+ +SLF R+
Sbjct: 1750 VVIDEAAQAVELSTIIPLRY-GCKQCIMVGDPNQLPPTVISQQADKLGYSQSLFVRMFER 1808
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYSF 709
+ HLL+IQYRMHP IS+FP+ FY +++ DG A + + + K LT + F
Sbjct: 1809 APQAVHLLSIQYRMHPEISVFPSKAFYDSKLQDGPDMAELTRQPWHKYELT----RPFKF 1864
Query: 710 INIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKK 769
++ +HS N E + + + ++L IG+V+ Y AQV +++
Sbjct: 1865 LSTKAPESPGRFHSIINKEEANVALALYERLRTDNPRENFDYRIGIVTMYKAQVFELKRT 1924
Query: 770 IGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC-NTGGSIGFISKPQRVNVALTRAR 828
Y + ++DGFQG E+DIII+S VR SIGF+S +R+NVA+TRA+
Sbjct: 1925 FQQRYGQDIVERIDFNTVDGFQGQEKDIIILSCVRSLPKPSSIGFLSDRRRLNVAVTRAK 1984
Query: 829 HCLWILGSERTLISSESIWGALVCDAKAR 857
L+I+G+ L ++IW +LV A+ R
Sbjct: 1985 SNLFIIGNAEHLRRGDAIWESLVAAAEQR 2013
Score = 43.9 bits (102), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 38/89 (42%), Gaps = 25/89 (28%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK---------- 306
+NE Q A+L L G LI GPPGTGKTKT+ L+ + +
Sbjct: 1500 VNEPQARAILGSL------ATGGFSLIQGPPGTGKTKTICALIGAFVSRRKGPSTSVQAG 1553
Query: 307 ---------CRTLACTPTNVAITELASRV 326
+ L C P+N AI E+A R
Sbjct: 1554 QAQGKVGATKKILLCAPSNAAIDEVAKRA 1582
>gi|365759093|gb|EHN00906.1| Nam7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1033
Score = 153 bits (387), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 151/272 (55%), Gaps = 11/272 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
++IDE+ Q E E IP+ + G A+L+GD QL P ++E K +D AG +SLFERL S
Sbjct: 631 VLIDESTQASEPECLIPI-VKGAKQAILVGDHQQLGPVILERKAAD-AGLKQSLFERLIS 688
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L H L +QYRM+P +S FP+ FY + +G ++ ++ G
Sbjct: 689 LGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWA 748
Query: 713 IGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
GRE+ + S N +E +I+ KL++ V +Q IGV++PY Q I + +
Sbjct: 749 NYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQ---IGVITPYEGQRAYILQYM 805
Query: 771 GFEYE-NKDGF-TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
+KD + V+V S+D FQG E+D II+S VR N +IGF+ P+R+NV LTRA+
Sbjct: 806 QMNGSLDKDLYINVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 865
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCF 860
+ L ILG+ R+L + ++W L+ + + C
Sbjct: 866 YGLVILGNPRSL-ARNTLWNHLLIHFREKGCL 896
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 15/117 (12%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRT 309
P+F+ LN SQ A+ L+R + LI GPPGTGKT T + ++ L +I K R
Sbjct: 466 PNFAQ-LNSSQSNAVSHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRI 517
Query: 310 LACTPTNVAITELASRV----LKLVKESYK--RDSRSNTPICPLGDILLFGNKDRLK 360
L C P+NVA+ LA+++ LK+V+ + K D S+ L +++ G K LK
Sbjct: 518 LVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLVGRGAKGELK 574
>gi|392575976|gb|EIW69108.1| hypothetical protein TREMEDRAFT_31469 [Tremella mesenterica DSM 1558]
Length = 1969
Score = 153 bits (387), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 149/272 (54%), Gaps = 8/272 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E IPL+ G +++GD QLP + ++ + SLF RL
Sbjct: 1665 VIIDEAAQAIELSCLIPLKY-GCTRCIMVGDPQQLPPTTLNPDGEKYAYNESLFVRLARE 1723
Query: 654 NHSK-HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
N S HLL+IQYRMHP IS P+ FY + DG N++ ++ + + +G Y F NI
Sbjct: 1724 NRSNVHLLSIQYRMHPDISRLPSKVFYHGALKDGPNME-RNTKAVWHENKNYGPYRFFNI 1782
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS--IGVVSPYTAQVVAIRKKI 770
G E S +N E A + I + L + + G + ++ +G+++ Y Q+ I+++
Sbjct: 1783 -EGSEIKAGTSTKNPEEAIAAVNIYKHLEEDF-GDRTNLALRVGIITMYREQMYEIKRQF 1840
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG-GSIGFISKPQRVNVALTRARH 829
+ ++ ++DGFQG E+DIII+S VR +IGF+ +R+NVALTRA+
Sbjct: 1841 LQAFGGSIMEMIEFNTVDGFQGQEKDIIILSCVRSGPNLRTIGFLRDERRMNVALTRAKS 1900
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFF 861
LWI+G+ TL S+ W +V DA+ R F
Sbjct: 1901 SLWIVGNGSTLERSDERWKVIVGDARERGFFL 1932
Score = 52.4 bits (124), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 22/106 (20%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLR------------ 304
+NE Q A+L ++ +G LI GPPGTGKTKT+S L+ +
Sbjct: 1429 VNEPQAKAILGAMQV------NGFALIQGPPGTGKTKTISGLVGKFMSERSIPIAMGHGE 1482
Query: 305 --IKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLG 348
+K + L C P+N AI E+ R++ V S SR N I +G
Sbjct: 1483 KPVKPKLLVCAPSNAAIDEVCKRLMNGVPSS--DGSRLNPTIVRIG 1526
>gi|294657547|ref|XP_002770466.1| DEHA2E12430p [Debaryomyces hansenii CBS767]
gi|199432775|emb|CAR65809.1| DEHA2E12430p [Debaryomyces hansenii CBS767]
Length = 985
Score = 153 bits (386), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 146/276 (52%), Gaps = 11/276 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IP+ + G +L+GD QL ++ K + +AG +SLFERL L
Sbjct: 594 VLIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDKKAGDAGLKQSLFERLVVL 652
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
H L +QYRM+P +S FP+ FY + +G K + E
Sbjct: 653 GHVPIRLEVQYRMNPCLSEFPSNMFYEGSLQNGVTAKQRLIENSIFPWPVLDNPMMFWAN 712
Query: 714 GGREDFIY--HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
GRE+ +S N VE V KI+ KL+K + Q IGV++PY Q I + +
Sbjct: 713 YGREEISGSGNSFLNRVEAMNVEKIITKLFKDGIEPSQ---IGVITPYEGQRAYIVQYMS 769
Query: 772 FE---YENKDGF-TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
E K+ + V++ S+D FQG E+D II+S VR N IGF+S P+R+NVALTRA
Sbjct: 770 MNSTLTELKEKYLEVEITSVDAFQGREKDFIILSCVRANDSQVIGFLSDPRRLNVALTRA 829
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
++ L ILG+ R L + ++W L+ + + C +
Sbjct: 830 KYGLVILGNPRALCRN-TLWNHLLIHFREKGCLVDG 864
Score = 52.0 bits (123), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ ++ + KF + LN SQ A+ + L+R + LI GPPGTGKT T
Sbjct: 411 EVAPIEFDIKLPNKFSHPNLTELNMSQTNAVRSVLQR-------PLSLIQGPPGTGKTVT 463
Query: 295 VSMLLLTLLRI-KCRTLACTPTNVAITELASRV----LKLVKESYK 335
+ ++ L ++ K + L C P+NVA+ LA ++ LK+++ + K
Sbjct: 464 SATIVYHLSKLSKEKILVCAPSNVAVDHLADKLNLLGLKVIRLTAK 509
>gi|340504626|gb|EGR31053.1| upf1 regulator of nonsense transcripts, putative [Ichthyophthirius
multifiliis]
Length = 928
Score = 153 bits (386), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 155/296 (52%), Gaps = 17/296 (5%)
Query: 563 EDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLI 622
E + A + ST SS E + ++IDEA Q E E +PL L G HA+L+
Sbjct: 459 EKEILQNAEVICSTCISSADPRLKEFR-FKHVLIDEATQAIEPECLLPL-LKGAKHAILV 516
Query: 623 GDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQ 682
GD QL +V + + AG +SLFERL S+ L +QYRMHP +S+FP+ FY
Sbjct: 517 GDHRQLGPVVTCRDTANAGLNKSLFERLVSMGVRPTRLQVQYRMHPDLSIFPSNTFYEGT 576
Query: 683 ILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYK 742
+L+G + + + + F+N G E I S + + + I + +YK
Sbjct: 577 LLNGVTFNDRQFHGDFPWPNKNKPLMFLNSCGVEE--ISSSGTSYLNRQETMLIEEIVYK 634
Query: 743 AWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGF-------TVKVKSIDGFQGGEE 795
G + IG+++PY Q R IG +Y K+G ++ S+DGFQG E+
Sbjct: 635 LIKGKVRPDQIGIITPYKGQ----RFYIG-DYLQKNGKLNPTLYQEIECCSVDGFQGREK 689
Query: 796 DIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
D IIIS VR N IGF++ +R+NVA+TRAR+ L I+G+ + L + +++W L+
Sbjct: 690 DYIIISCVRSNESQGIGFLTDARRLNVAITRARYGLIIVGNAKVL-ARDNLWNNLL 744
Score = 47.0 bits (110), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 17/85 (20%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRT------L 310
LN QV A+ L++ C LI GPPGTGKT T + ++ L++ RT L
Sbjct: 320 LNYYQVEAVKKALQQPLC-------LIQGPPGTGKTFTSTAIIYHLVQNIKRTGQRGQIL 372
Query: 311 ACTPTNVAITELASRV----LKLVK 331
C P+N+ + +LA R+ LK+V+
Sbjct: 373 VCAPSNIVVDQLAERMHYAGLKVVR 397
>gi|300122269|emb|CBK22842.2| unnamed protein product [Blastocystis hominis]
Length = 586
Score = 153 bits (386), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 149/273 (54%), Gaps = 29/273 (10%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
L +++DEA Q E IPL + + +L+GD QL A + + G+G+SLFERL
Sbjct: 302 LPIVIVDEATQCTEPHCLIPLCVKP-SLFILVGDSHQLAATILNPTIKRLGYGKSLFERL 360
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFI 710
+ L IQ+RM PSISL+PN Y++Q++D V+ S+ + + +Y+F+
Sbjct: 361 VLNKFPRLSLRIQFRMTPSISLWPNQYVYQSQLIDSKRVRQPSFCYIF-QNSSVPSYAFL 419
Query: 711 NI-------------IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVS 757
++ I + +H N+ E V+ ++ +L+ S SIGV+S
Sbjct: 420 DVPEVLLFEFDAIQGICAKHRSSFH---NLREAEIVVDLIHRLFLQLPPSTIGYSIGVIS 476
Query: 758 PYTAQVVAIRKKIG-----FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR-----CNT 807
PYTAQV IR ++ ++E KD VK+ S+D FQGGE DIII+S VR
Sbjct: 477 PYTAQVHQIRNRMNSVIDCAQFE-KDLKLVKISSVDAFQGGESDIIILSCVRSTLKDAQA 535
Query: 808 GGSIGFISKPQRVNVALTRARHCLWILGSERTL 840
S+GF+S QR+NVALTRA+ LWI+G+ + L
Sbjct: 536 IKSVGFLSNLQRLNVALTRAKQALWIVGNAQHL 568
>gi|367000487|ref|XP_003684979.1| hypothetical protein TPHA_0C03950 [Tetrapisispora phaffii CBS 4417]
gi|357523276|emb|CCE62545.1| hypothetical protein TPHA_0C03950 [Tetrapisispora phaffii CBS 4417]
Length = 990
Score = 153 bits (386), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/360 (33%), Positives = 180/360 (50%), Gaps = 44/360 (12%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
++IDE+ Q E E IP+ + G +L+GD QL P ++E K D AG +SLFERL S
Sbjct: 583 VLIDESTQASEPECLIPI-IKGAKQVILVGDHQQLGPVILERKAGD-AGLKQSLFERLIS 640
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGT--EFGTYSFI 710
L H L +QYRM+P +S FP+ FY + +G ++ ++ E +
Sbjct: 641 LGHIPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVSASSFPWPIHEIPMMFWA 700
Query: 711 NIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
N GRE+ + S N +E +I+ KL+K V +Q IGV++PY Q I
Sbjct: 701 NF--GREEISANGTSYLNRIEAMNCERIITKLFKDGVKPEQ---IGVITPYEGQRAYI-- 753
Query: 769 KIGFEYENKDG-------FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVN 821
+Y +G V+V S+D FQG E+D II+S VR N +IGF+S P+R+N
Sbjct: 754 ---LQYMQMNGSLDKELYINVEVASVDAFQGREKDYIILSCVRANEQQAIGFLSDPRRLN 810
Query: 822 VALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELV 881
V LTRA++ L ILG+ R+L S S+W L+ + + C +E S + +
Sbjct: 811 VGLTRAKYGLVILGNPRSL-SRNSLWNHLLIHFREKGCL-------------VEGSLDNL 856
Query: 882 EIGAESLTSTSQGGKKEEFEFEFVKAFRSINLIHKVLNSLGRFDELLMLENGSGNFMEAA 941
++ LT + Q K+ +F+F A N+ NS FD +L GN AA
Sbjct: 857 QLCTVELTRSYQ-KKRNPNKFDFNMA---ANMGE--FNSFNDFDTQSLLSFAGGNASAAA 910
Score = 50.8 bits (120), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 13/90 (14%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRT 309
P F+ LN SQ A+ L++ + LI GPPGTGKT T + ++ L + K R
Sbjct: 418 PHFAQ-LNASQASAVANVLQK-------PLSLIQGPPGTGKTVTSATIVYHLSKSHKDRI 469
Query: 310 LACTPTNVAITELASRV----LKLVKESYK 335
L C P+NVA+ LA+++ LK+V+ + K
Sbjct: 470 LVCAPSNVAVDHLATKLRDLGLKVVRLTAK 499
>gi|361128156|gb|EHL00106.1| putative Regulator of nonsense transcripts 1 like protein [Glarea
lozoyensis 74030]
Length = 898
Score = 153 bits (386), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/291 (37%), Positives = 157/291 (53%), Gaps = 14/291 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 417 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 475
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
+ LN+QYRMHP +S FP+ FY + +G ++ + + + F +
Sbjct: 476 GLAPIRLNVQYRMHPCLSQFPSNMFYEGSLQNGVTMQQRLRRDVDFPWPVGDTPMMFWSN 535
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRK 768
+G E S N E S V KI+ + +KA V Q IGV++PY Q VV+ +
Sbjct: 536 LGNEEISASGTSYLNRTEASNVEKIVTRFFKAGV---QPQDIGVITPYEGQRSFVVSSMQ 592
Query: 769 KIG-FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
G F+ EN ++V S+D FQG E+D I++S VR N IGF+S P+R+NVALTRA
Sbjct: 593 NTGTFKKENYK--EIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRA 650
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
++ L ILG+ + L S +W L+ K R C NL + L+ S+
Sbjct: 651 KYGLVILGNPKVL-SKHPLWHYLLLHFKERNCLVEGPLS-NLQTSLLQFSR 699
Score = 54.3 bits (129), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q +KF LN SQ+ A+ + L++ + LI GPPGTGKT T
Sbjct: 233 EVAAAPMKIQMPKKFSVPGLPELNSSQINAVKSVLQKP-------LSLIQGPPGTGKTVT 285
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYK 335
+ ++ L ++ + L C P+NVA+ +L R+ LK+V+ + K
Sbjct: 286 SATIIYHLAKVNGGQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAK 331
>gi|321264612|ref|XP_003197023.1| hypothetical protein CGB_L2150W [Cryptococcus gattii WM276]
gi|317463501|gb|ADV25236.1| hypothetical protein CNBL1770 [Cryptococcus gattii WM276]
Length = 2184
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 130/402 (32%), Positives = 191/402 (47%), Gaps = 44/402 (10%)
Query: 520 AFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASS 579
A + +R QL Q S+ R+ LD ++ D K A + +T S
Sbjct: 1622 ALITRRT--QLGQASSKAKDAARDATRHLD-------GARRAARDQILKDADIICATLSG 1672
Query: 580 ----SYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQ-------LAGIN---HAVLIGDE 625
+ H+ E ++IDEAAQ E IPL+ + G N H V + D
Sbjct: 1673 AGHDTLAAHTFET-----VIIDEAAQAIEMSCLIPLKYGCKRCIMVGGNLILHPVSLTDP 1727
Query: 626 CQLPAMVESKISDEAGFGRSLFERLTSLNHSK-HLLNIQYRMHPSISLFPNLQFYRNQIL 684
QLP S +++ + +SLF R+T + S LL+IQYRMHP IS P+ FY Q+
Sbjct: 1728 NQLPPTTFSANAEKLQYNKSLFVRMTKRDASHVQLLSIQYRMHPFISELPSKVFYHGQLK 1787
Query: 685 DGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAW 744
DG ++ K+ + FG Y F NI G E S +N E A +++ ++L A
Sbjct: 1788 DGPSMAKKTAAIWHQRNI-FGPYRFFNI-EGTEMKTGTSTKNPAEALAAVELYRRL-NAD 1844
Query: 745 VGSKQKVS--IGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIIST 802
G++ ++ IGV+S Y Q+ +++K + + V+ ++DGFQG E+DIII+S
Sbjct: 1845 FGTRVNLAMRIGVISMYREQLWELKRKFTEAFGSTILELVEFNTVDGFQGQEKDIIILSC 1904
Query: 803 VRCNTG-GSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFF 861
VR IGF+ +R+NVALTRA+ L+I G+ TL S+ W +V DA+ R F
Sbjct: 1905 VRSGPNLNHIGFLKDTRRMNVALTRAKSSLFIFGNGPTLERSDERWKIIVQDARDRGFFI 1964
Query: 862 NAD---------EERNLAKARLEVSKELVEIGAESLTSTSQG 894
N D E K R VSK GA T+ G
Sbjct: 1965 NYDSTTFNTAVLEPPPSVKKRGSVSKSKASPGAPRSTAVPDG 2006
Score = 51.2 bits (121), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 19/85 (22%)
Query: 256 TLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLL---LTLLRI------- 305
+LNE Q A+L L G LI GPPGTGKTKT+S L+ ++ RI
Sbjct: 1451 SLNEPQAKAVLGAL------EVRGFALIQGPPGTGKTKTISGLVGKWMSERRIPISVDGQ 1504
Query: 306 ---KCRTLACTPTNVAITELASRVL 327
K + L C P+N AI E+ R++
Sbjct: 1505 PPVKPKLLVCAPSNAAIDEVCKRLI 1529
>gi|303281096|ref|XP_003059840.1| superfamily I helicase [Micromonas pusilla CCMP1545]
gi|226458495|gb|EEH55792.1| superfamily I helicase [Micromonas pusilla CCMP1545]
Length = 1122
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 162/328 (49%), Gaps = 16/328 (4%)
Query: 561 VLEDFCFKRASLFFST-ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHA 619
VLE A + F+T S+S ++ + + +DEAAQ E E+ IP L G
Sbjct: 758 VLEASFVDEAEIVFTTLTSASRRVFQKLTHGFDTVFVDEAAQSSEVETLIPF-LHGARRC 816
Query: 620 VLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFY 679
VL+GD QLP+ V S + F RSLFER TSL LL++QYRMHP I FP+ FY
Sbjct: 817 VLVGDPQQLPSTVLSTAAQGVSFQRSLFERFTSLGAEAVLLSVQYRMHPEIRAFPSRAFY 876
Query: 680 RNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRED-FIYHSCRNIVEVSAVIKILQ 738
++ D +V + E Y Y + G+E S N E V+ +++
Sbjct: 877 EGRLRDSESVIAAPPE-SYHASWPLRPYVLFDASQGKEKRSTVGSVSNPYEALIVVSLVR 935
Query: 739 KLYKA-WVGSKQKVS--IGVVSPYTAQVVAIRKKIGFEYENKDG---FTVKVKSIDGFQG 792
+L + W + + V +++PY AQ IR Y ++ + V ++DGFQG
Sbjct: 936 RLERTLWRKNGETVDGRCAIITPYKAQRSKIRDAFARVYGDESAMHRLGIVVSTVDGFQG 995
Query: 793 GEEDIIIISTV-RCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
E D+II STV G IGF+ +R+NVALTRAR LWI+G L +W LV
Sbjct: 996 QEADVIIFSTVRGGAGRGGIGFLQDVKRMNVALTRARRSLWIVGRVDAL-EGNPMWKDLV 1054
Query: 852 CDAKARQCFFNADEERNLAKARLEVSKE 879
DA+ R C E ++ LEV+ E
Sbjct: 1055 DDARERGCVVPDSELGDV----LEVAGE 1078
>gi|58270392|ref|XP_572352.1| hypothetical protein CNH01780 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57228610|gb|AAW45045.1| hypothetical protein CNH01780 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 2245
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/351 (33%), Positives = 179/351 (50%), Gaps = 26/351 (7%)
Query: 520 AFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASS 579
A + +R QL Q S+ R+ LD ++ D K A + +T S
Sbjct: 1663 ALITRRT--QLGQASSKAKDAARDATRHLD-------GARRAARDQILKDADIICATLSG 1713
Query: 580 ----SYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESK 635
+ H+ E ++IDEAAQ E IPL+ G V++GD QLP S
Sbjct: 1714 AGHDTLAAHTFET-----VIIDEAAQAIEMSCLIPLKY-GCKRCVMVGDPNQLPPTTFST 1767
Query: 636 ISDEAGFGRSLFERLTSLNHSK-HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSY 694
+++ + +SLF R+T + S LL+IQYRMHP IS P+ FY Q+ DG ++ K+
Sbjct: 1768 NAEKLQYNKSLFVRMTKRDASHVQLLSIQYRMHPFISELPSKVFYHGQLKDGPSMAKKTA 1827
Query: 695 EKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS-- 752
+ FG Y F N+ G E S +N E A +++ ++L A G++ ++
Sbjct: 1828 AIWHQRNI-FGPYRFFNV-EGTEMKTGTSTKNPAEALAAVELYRRL-SADFGTRVNLAMR 1884
Query: 753 IGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGS-I 811
+GV+S Y Q+ +++K + + V+ ++DGFQG E+DIII+S VR S I
Sbjct: 1885 VGVISMYREQLWELKRKFTEAFGSAILELVEFNTVDGFQGQEKDIIILSCVRSGPNLSHI 1944
Query: 812 GFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFN 862
GF+ +R+NVALTRA+ L+I G+ TL S+ W +V DA+ R F N
Sbjct: 1945 GFLKDTRRMNVALTRAKSSLFIFGNGPTLERSDERWKIIVQDARDRGFFVN 1995
Score = 50.8 bits (120), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 19/85 (22%)
Query: 256 TLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLR----------- 304
+LNE Q A+L L G LI GPPGTGKTKT+S L+ +
Sbjct: 1492 SLNEPQAKAVLGAL------EVRGFALIQGPPGTGKTKTISGLVGKWMSERRVPISVDGQ 1545
Query: 305 --IKCRTLACTPTNVAITELASRVL 327
+K + L C P+N AI E+ R++
Sbjct: 1546 PPVKPKLLVCAPSNAAIDEVCKRLI 1570
>gi|452824849|gb|EME31849.1| tRNA-splicing endonuclease positive effector-related protein
[Galdieria sulphuraria]
Length = 895
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 166/320 (51%), Gaps = 28/320 (8%)
Query: 565 FC-FKRASLFFSTASSSYKLHSVEIKPLNF----LVIDEAAQLKESESTIPLQLAGINHA 619
FC A L FS + +S H+ F ++IDEAAQ E IP L I
Sbjct: 546 FCTLSGAFLLFSLSGNSAISHTRNQMDKYFWFDTVIIDEAAQATEPACLIPF-LFQIKRC 604
Query: 620 VLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFY 679
VLIGD QLPA V S +G+SL ER + +L+ QYRMHP+ISLFPN FY
Sbjct: 605 VLIGDPQQLPATVFSCGDLGTAYGQSLLERFCRVGRPVIMLDTQYRMHPAISLFPNQYFY 664
Query: 680 RNQILDGANVKSKSYEKQYLTGTEF-----GTYSFINIIGGREDFIYHSCRNIVEVSAVI 734
+ + + +V + + + ++ ++F G Y+ I+I G+E S E A
Sbjct: 665 QGLLKNDTSVCNDN--RSHICHSDFLKPLLGPYAVIDISDGKEFRSSSSGSFYNEKEA-- 720
Query: 735 KILQKLYKAW-----------VGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVK 783
I+ ++YK + + K +G+V+PY Q++++R+ FE + V+
Sbjct: 721 DIIARIYKYFQHKYLPKETNETNTPFKKRVGIVTPYRRQLLSLRQ--AFEKHHISLRGVE 778
Query: 784 VKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISS 843
+ S+D FQG E+D II+S VRC+ IGF+ +R+NVA+TRA++ L I+G+ + L
Sbjct: 779 IDSVDAFQGREKDWIILSCVRCSFEKGIGFVRDIRRMNVAITRAKYSLLIVGNMKALSHH 838
Query: 844 ESIWGALVCDAKARQCFFNA 863
+ W ALV +AK R N
Sbjct: 839 STDWFALVENAKQRGVLLNG 858
>gi|393243189|gb|EJD50704.1| hypothetical protein AURDEDRAFT_83748 [Auricularia delicata TFB-10046
SS5]
Length = 2008
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/298 (35%), Positives = 153/298 (51%), Gaps = 33/298 (11%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL-TS 652
+VIDEAAQ E S IPL+ G V++GD QLP V SK + + +SLF R+
Sbjct: 1558 VVIDEAAQSIELSSLIPLRY-GCKRCVMVGDPQQLPPTVISKRATHFKYNQSLFVRIFER 1616
Query: 653 LNHSKHLL-------------------NIQYRMHPSISLFPNLQFYRNQILDGANVKSKS 693
+ HLL +IQYRMHP ISL P+ FY + DG ++ +K+
Sbjct: 1617 KPKAAHLLRHVPNSSHPHLCRTQRLHHSIQYRMHPDISLIPSKLFYGGNLKDGPDMAAKT 1676
Query: 694 YEKQYLTGTEFGTYSFINIIGGRED--FIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKV 751
E+ + GTY F NI G + + S N EV A + + + +
Sbjct: 1677 -EQPWHASELLGTYRFFNIAQGHHENAAVGLSLVNRAEVDAALALYEAFLSQYSDQDMSH 1735
Query: 752 SIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVK----SIDGFQGGEEDIIIISTVRCNT 807
IGV+S Y AQ+ A+++ +E + G +K K ++DGFQG E+DIII+S VR
Sbjct: 1736 RIGVISMYKAQINALQRA----FEGRYGADIKNKLDFNTVDGFQGQEKDIIILSCVRAGP 1791
Query: 808 G-GSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
IGF+ +R+NV++TRAR L+ILG TL + W +V DA+AR +A+
Sbjct: 1792 RVTDIGFVKDVRRLNVSITRARSSLFILGHAATLERGDDTWRQIVEDARARGFLVDAE 1849
>gi|134117856|ref|XP_772309.1| hypothetical protein CNBL1770 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254922|gb|EAL17662.1| hypothetical protein CNBL1770 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 2245
Score = 152 bits (385), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 179/351 (50%), Gaps = 26/351 (7%)
Query: 520 AFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASS 579
A + +R QL Q S+ R+ LD ++ D K A + +T S
Sbjct: 1663 ALITRRT--QLGQASSKAKDAARDATRHLD-------GARRAARDQILKDADIICATLSG 1713
Query: 580 ----SYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESK 635
+ H+ E ++IDEAAQ E IPL+ G +++GD QLP S
Sbjct: 1714 AGHDTLAAHTFET-----VIIDEAAQAIEMSCLIPLKY-GCKRCIMVGDPNQLPPTTFST 1767
Query: 636 ISDEAGFGRSLFERLTSLNHSK-HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSY 694
+++ + +SLF R+T + S LL+IQYRMHP IS P+ FY Q+ DG ++ K+
Sbjct: 1768 NAEKLQYNKSLFVRMTKRDASHVQLLSIQYRMHPFISELPSKVFYHGQLKDGPSMAKKTA 1827
Query: 695 EKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS-- 752
+ FG Y F N+ G E S +N E A +++ ++L A G++ ++
Sbjct: 1828 AIWHQRNI-FGPYRFFNV-EGTEMKTGTSTKNPAEALAAVELYRRL-SADFGTRVNLAMR 1884
Query: 753 IGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGS-I 811
+GV+S Y Q+ +++K + + V+ ++DGFQG E+DIII+S VR S I
Sbjct: 1885 VGVISMYREQLWELKRKFTEAFGSAILELVEFNTVDGFQGQEKDIIILSCVRSGPNLSHI 1944
Query: 812 GFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFN 862
GF+ +R+NVALTRA+ L+I G+ TL S+ W +V DA+ R F N
Sbjct: 1945 GFLKDTRRMNVALTRAKSSLFIFGNGPTLERSDERWKIIVQDARDRGFFVN 1995
Score = 50.8 bits (120), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 19/85 (22%)
Query: 256 TLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLR----------- 304
+LNE Q A+L L G LI GPPGTGKTKT+S L+ +
Sbjct: 1492 SLNEPQAKAVLGAL------EVKGFALIQGPPGTGKTKTISGLVGKWMSERRVPISVDGQ 1545
Query: 305 --IKCRTLACTPTNVAITELASRVL 327
+K + L C P+N AI E+ R++
Sbjct: 1546 PPVKPKLLVCAPSNAAIDEVCKRLI 1570
>gi|402085799|gb|EJT80697.1| regulator-nonsense transcripts 1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1097
Score = 152 bits (384), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 152/275 (55%), Gaps = 11/275 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 615 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKL 673
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
N + LN+QYRMHP +S FP+ FY + +G ++ + + + F +
Sbjct: 674 NLTPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTIQQRLRRDVDFPWPVGDMPMMFWSN 733
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRK 768
+G E S N E S V KI+ + +KA V + IGV++PY Q +V+ +
Sbjct: 734 LGNEEISASGTSYLNRTEASNVEKIVTRFFKAGV---KPGDIGVITPYEGQRSYIVSTMQ 790
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
G ++ + V+V S+D FQG E+D I++S VR N IGF+S P+R+NVALTRA+
Sbjct: 791 NTG-TFKKESYKEVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRRLNVALTRAK 849
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
+ + I+G+ + L S +W L+ + R+C +
Sbjct: 850 YGVVIIGNPKVL-SKHELWHHLLVHFRDRKCLVDG 883
Score = 51.6 bits (122), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 12/94 (12%)
Query: 247 EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI- 305
+KF LN SQ+ A+ A L + + LI GPPGTGKT T + ++ L ++
Sbjct: 443 KKFTAPGLPELNGSQISAIKAVLS-------TPLSLIQGPPGTGKTVTSATIIYHLAKMN 495
Query: 306 KCRTLACTPTNVAITELASRV----LKLVKESYK 335
+ L C P+NVA+ +L RV LK+V+ + K
Sbjct: 496 NSQVLVCAPSNVAVDQLCERVHRTGLKVVRLTAK 529
>gi|302801241|ref|XP_002982377.1| hypothetical protein SELMODRAFT_421714 [Selaginella moellendorffii]
gi|300149969|gb|EFJ16622.1| hypothetical protein SELMODRAFT_421714 [Selaginella moellendorffii]
Length = 1811
Score = 152 bits (384), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 145/273 (53%), Gaps = 12/273 (4%)
Query: 591 LNFLVIDEAAQLKESESTIPLQL--AGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
+ ++IDEAAQ E + IPLQL A +LIGD QLPA V S + F S+FE
Sbjct: 735 FDAVIIDEAAQAVEPSTLIPLQLLKATRGKCILIGDPKQLPATVLSVPASRLLFDCSMFE 794
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYS 708
R + +L QYRMHP I FP+ +Y Q+ DG+ V + + F Y
Sbjct: 795 RFQKHGYPVSMLTTQYRMHPEIRSFPSTHYYGGQLKDGSTVLHGNRSATFHRERCFEPYR 854
Query: 709 FINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F +I G+E S N E + ++L+ L + + + IGV++PY Q ++
Sbjct: 855 FFDIRDGQERPGSMQSLTNPDEAEFIFQLLRVLKERYPEEVRPGRIGVITPYQEQRKVLQ 914
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGS---IGFISKPQRVNVAL 824
+ + + D V ++D FQG E DII++STVR + G S +GF++ +R+NVAL
Sbjct: 915 ENMRSLHSGID-----VNTVDSFQGREADIIVLSTVRASFGDSQAGVGFLADVRRMNVAL 969
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKAR 857
TRA+ LW++G+ RTL + W AL+ D + R
Sbjct: 970 TRAKFSLWVVGNARTLERNPD-WKALLQDCRRR 1001
>gi|358055738|dbj|GAA98083.1| hypothetical protein E5Q_04765 [Mixia osmundae IAM 14324]
Length = 1047
Score = 152 bits (384), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 151/289 (52%), Gaps = 10/289 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E E IPL G+ V++GD QL + SK + AG +SLFERL L
Sbjct: 621 VLIDEATQATEPECMIPLTF-GVKQLVMVGDHSQLGPTIMSKKAARAGLTQSLFERLVLL 679
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
+ L +QYRMHP +S FP+ FY + +G + + + T + +
Sbjct: 680 GNRPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTAPERIKKNVDFPWPQPTTPMYFHQN 739
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E + V K++ +L+K+ V Q IG+V+PY Q I +
Sbjct: 740 LGQEEISSSGTSFLNRTEAANVEKVVTRLFKSGVMPHQ---IGIVTPYEGQRAYIANYML 796
Query: 772 FEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K ++V S+D FQG E+D I++S VR N IGF++ P+R+NVALTRA++
Sbjct: 797 FNGSLKKELYKDIEVASVDAFQGREKDYILLSCVRSNEHQGIGFLNDPRRLNVALTRAKY 856
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
L ILG+ + L S ++W L+ K + C NL + +++SK
Sbjct: 857 GLVILGNPKVL-SKHALWHYLLTHYKEKGCLVEG-PLSNLQPSLIQLSK 903
Score = 43.9 bits (102), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 12/84 (14%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACTPT 315
LN SQV A+ + L++ + LI GPPGTGKT T + ++ L + + + L P+
Sbjct: 459 LNHSQVYAVKSVLQK-------PLSLIQGPPGTGKTVTSASIVYHLATMSQGQVLVTAPS 511
Query: 316 NVAITELASRV----LKLVKESYK 335
NVA+ +L ++ LK+V+ + K
Sbjct: 512 NVAVDQLTEKIHTTGLKVVRITAK 535
>gi|9759443|dbj|BAB10240.1| prematurely terminated mRNA decay factor-like protein [Arabidopsis
thaliana]
Length = 1235
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 148/281 (52%), Gaps = 29/281 (10%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G+ VL+GD CQL ++ K + AG +SLFERL +L
Sbjct: 650 VLIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVTL 708
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF-----GTYS 708
L +QYRMHP++S FP+ FY + +G + E+Q TG +F
Sbjct: 709 GIKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTI----IERQ-TTGIDFPWPVPNRPM 763
Query: 709 FINIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
F + G+E+ N E + V K++ K+ V Q IGV++PY Q I
Sbjct: 764 FFYVQLGQEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPSQ---IGVITPYEGQRAYI 820
Query: 767 RKKIGFEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQR 819
Y ++G ++V S+D FQG E+D II+S VR N IGF++ P+R
Sbjct: 821 -----VNYMARNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 875
Query: 820 VNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
+NVALTRAR+ + ILG+ + L S + +W L+ K +C
Sbjct: 876 LNVALTRARYGIVILGNPKVL-SKQPLWNGLLTHYKEHECL 915
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 12/102 (11%)
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-K 306
+FG LN SQV A+ + L++ + LI GPPGTGKT T + ++ + + +
Sbjct: 477 RFGVPGLPELNASQVNAVKSVLQKP-------ISLIQGPPGTGKTVTSAAIVYHMAKQGQ 529
Query: 307 CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ L C P+NVA+ +LA ++ LK+V+ K ++P+
Sbjct: 530 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 571
>gi|448531806|ref|XP_003870332.1| Nam7 protein [Candida orthopsilosis Co 90-125]
gi|380354686|emb|CCG24202.1| Nam7 protein [Candida orthopsilosis]
Length = 1014
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/276 (34%), Positives = 145/276 (52%), Gaps = 11/276 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DE+ Q E E IP+ + G +L+GD QL ++ + + +AG +SLFERL L
Sbjct: 598 VLVDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDRKAADAGLKQSLFERLVFL 656
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
H L +QYRMHP +S FP+ FY + DG + T
Sbjct: 657 GHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQDGVTNADRVVADSSFPWPVIDTPMMFWAN 716
Query: 714 GGREDFIY--HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
GRE+ +S N VE V +I+ +L+K + +Q IGV++PY Q + + +
Sbjct: 717 YGREELSSSGNSYLNRVEAMNVERIITRLFKDGIKPEQ---IGVITPYEGQRAYLVQFMS 773
Query: 772 FE---YENKDGF-TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+D + V++ S+D FQG E+D II+S VR N SIGF+S P+R+NVALTRA
Sbjct: 774 MNSTLLNKRDEYLEVEITSVDAFQGREKDFIILSCVRANDTQSIGFLSDPRRLNVALTRA 833
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
++ L +LG+ R L S +W L+ + + C +
Sbjct: 834 KYGLLVLGNPRAL-SRNRLWNHLLVHFREKGCLVDG 868
Score = 52.0 bits (123), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 8/76 (10%)
Query: 255 STLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACT 313
+ LN SQ A+ + L+R + LI GPPGTGKT T + ++ L R+ K + L C
Sbjct: 435 TELNVSQANAVRSVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSRLNKEKILVCA 487
Query: 314 PTNVAITELASRVLKL 329
P+NVA+ LA+++ L
Sbjct: 488 PSNVAVDHLAAKLDSL 503
>gi|401402591|ref|XP_003881287.1| putative regulator of nonsense transcripts UPF1 [Neospora caninum
Liverpool]
gi|325115699|emb|CBZ51254.1| putative regulator of nonsense transcripts UPF1 [Neospora caninum
Liverpool]
Length = 1428
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 140/263 (53%), Gaps = 27/263 (10%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E E IP+ L G VLIGD CQL +V SK + AG SLF RL +L
Sbjct: 795 VVIDEAAQATEPECLIPIVL-GAKQVVLIGDHCQLGPVVLSKKAAAAGLATSLFSRLLAL 853
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
H L +QYRMHP++S FP+ FY ++ +G + ++Y + G G + F
Sbjct: 854 GHRPLRLKVQYRMHPALSFFPSYFFYEGELQNGVTMTERTY---FHRGP--GEHRFPWPS 908
Query: 714 GGREDFIYHSCR------------NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTA 761
R F YHS N VE S + KI+ L K + + Q IGV++PY
Sbjct: 909 EERPMFFYHSTASEEISGSGTSYVNRVEASNIEKIVTFLLKCGLKASQ---IGVITPYDG 965
Query: 762 QVVAIRKKIGFEYENKDG----FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKP 817
Q I F+ + G ++V S+D FQG E+D I++S VR N+ IGF++
Sbjct: 966 QRAHISSL--FQRQTTLGQAAFADLEVASVDAFQGREKDFILLSCVRSNSNTGIGFLADS 1023
Query: 818 QRVNVALTRARHCLWILGSERTL 840
+R+NVA+TRA++ L I G+ L
Sbjct: 1024 RRLNVAMTRAKYGLIICGNASVL 1046
>gi|30695086|ref|NP_199512.2| Regulator of nonsense transcripts 1-like protein [Arabidopsis
thaliana]
gi|88984684|sp|Q9FJR0.2|RENT1_ARATH RecName: Full=Regulator of nonsense transcripts 1 homolog; AltName:
Full=ATP-dependent helicase UPF1
gi|332008074|gb|AED95457.1| Regulator of nonsense transcripts 1-like protein [Arabidopsis
thaliana]
Length = 1254
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 148/281 (52%), Gaps = 29/281 (10%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G+ VL+GD CQL ++ K + AG +SLFERL +L
Sbjct: 653 VLIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVTL 711
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF-----GTYS 708
L +QYRMHP++S FP+ FY + +G + E+Q TG +F
Sbjct: 712 GIKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTI----IERQ-TTGIDFPWPVPNRPM 766
Query: 709 FINIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
F + G+E+ N E + V K++ K+ V Q IGV++PY Q I
Sbjct: 767 FFYVQLGQEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPSQ---IGVITPYEGQRAYI 823
Query: 767 RKKIGFEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQR 819
Y ++G ++V S+D FQG E+D II+S VR N IGF++ P+R
Sbjct: 824 -----VNYMARNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 878
Query: 820 VNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
+NVALTRAR+ + ILG+ + L S + +W L+ K +C
Sbjct: 879 LNVALTRARYGIVILGNPKVL-SKQPLWNGLLTHYKEHECL 918
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 12/102 (11%)
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-K 306
+FG LN SQV A+ + L++ + LI GPPGTGKT T + ++ + + +
Sbjct: 480 RFGVPGLPELNASQVNAVKSVLQKP-------ISLIQGPPGTGKTVTSAAIVYHMAKQGQ 532
Query: 307 CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ L C P+NVA+ +LA ++ LK+V+ K ++P+
Sbjct: 533 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 574
>gi|359474491|ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts 1 homolog [Vitis
vinifera]
gi|297742168|emb|CBI33955.3| unnamed protein product [Vitis vinifera]
Length = 1267
Score = 152 bits (383), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 149/281 (53%), Gaps = 29/281 (10%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G+ VL+GD CQL ++ K + AG +SLFERL L
Sbjct: 638 VLIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 696
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF-----GTYS 708
L +QYRMHPS+S FP+ FY + +G + E+Q +G +F
Sbjct: 697 GVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTIN----ERQS-SGIDFPWPVPNRPM 751
Query: 709 FINIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
F + G+E+ N E + V KI+ ++ V Q IGV++PY Q I
Sbjct: 752 FFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ---IGVITPYEGQRAYI 808
Query: 767 RKKIGFEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQR 819
Y +++G ++V S+D FQG E+D II+S VR N IGF++ P+R
Sbjct: 809 -----VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 863
Query: 820 VNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
+NVALTRAR+ + ILG+ + L S + +W +L+ K +C
Sbjct: 864 LNVALTRARYGIVILGNPKVL-SKQPLWNSLLTHYKEHECL 903
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 12/102 (11%)
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-K 306
+FG LN SQV A+ + L++ + LI GPPGTGKT T + ++ + + +
Sbjct: 465 RFGAPGLPELNASQVFAVKSVLQKP-------ISLIQGPPGTGKTVTSAAIVYHMAKQGQ 517
Query: 307 CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ L C P+NVA+ +LA ++ LK+V+ K ++P+
Sbjct: 518 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 559
>gi|159487559|ref|XP_001701790.1| UPF1 protein [Chlamydomonas reinhardtii]
gi|158281009|gb|EDP06765.1| UPF1 protein [Chlamydomonas reinhardtii]
Length = 800
Score = 151 bits (382), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/279 (36%), Positives = 150/279 (53%), Gaps = 25/279 (8%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IP+ L G +L+GD CQL ++ K + EAG +SLFERL L
Sbjct: 514 VLIDESTQAAEPECLIPMVL-GAKQVILVGDHCQLGPVIMCKKAAEAGLCQSLFERLRLL 572
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFG------TY 707
L +QYRMHP +S FP+ FY + +G + + L G +F
Sbjct: 573 GVKPIRLQVQYRMHPCLSEFPSNTFYEGTLQNGTGMGERR-----LAGVDFPWPNPDKPM 627
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---V 763
F +G E S N E +AV K++ + + + Q IGV++PY Q V
Sbjct: 628 MFWVQLGAEEISASSTSYLNRTEAAAVEKVVTRFLQNGMSPAQ---IGVITPYEGQRAHV 684
Query: 764 VAIRKKIGFEYEN--KDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVN 821
V++ + G ++ K+ ++V S+D FQG E+DII++S VR N SIGF+S P+R+N
Sbjct: 685 VSVMVRNGTARQDLYKE---IEVSSVDAFQGREKDIIVLSCVRSNEHSSIGFLSDPRRLN 741
Query: 822 VALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
VALTRAR L +LG+ R L S + +W +L+ K C
Sbjct: 742 VALTRARFGLVVLGNPRVL-SRQPLWNSLLQYFKEHGCL 779
>gi|389640681|ref|XP_003717973.1| regulator-nonsense transcripts 1 [Magnaporthe oryzae 70-15]
gi|351640526|gb|EHA48389.1| regulator-nonsense transcripts 1 [Magnaporthe oryzae 70-15]
gi|440471031|gb|ELQ40068.1| ATP-dependent helicase NAM7 [Magnaporthe oryzae Y34]
gi|440490268|gb|ELQ69843.1| ATP-dependent helicase NAM7 [Magnaporthe oryzae P131]
Length = 1105
Score = 151 bits (382), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 158/290 (54%), Gaps = 12/290 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 614 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKL 672
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
+ LN+QYRMHP +S FP+ FY + +G ++ + + + F +
Sbjct: 673 GLTPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTIQQRLRRDVDFPWPVADMPMMFWSN 732
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRK 768
+G E S N E S V K++ + +KA V + IGVV+PY Q +V+ +
Sbjct: 733 LGNEEISASGTSYLNRTEASNVEKLVTRFFKAGV---KPGDIGVVTPYEGQRSYIVSTMQ 789
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
G ++ + V+V S+D FQG E+D I++S VR N IGF+S P+R+NVALTRA+
Sbjct: 790 NTG-TFKKESYKEVEVASVDAFQGREKDFIVLSCVRSNESQGIGFLSDPRRLNVALTRAK 848
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
+ + I+G+ + L S +W L+ + R+C + NL + L+ SK
Sbjct: 849 YGVVIIGNPKVL-SKHELWHHLLIHFRDRKCLVDG-PLTNLQASLLQFSK 896
Score = 52.0 bits (123), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 12/94 (12%)
Query: 247 EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK 306
+KF LN SQ+ A+ A L + + LI GPPGTGKT T + ++ L ++
Sbjct: 442 KKFTAPGLPDLNGSQISAIKAVLS-------TPLSLIQGPPGTGKTVTSATIIYHLAKMN 494
Query: 307 -CRTLACTPTNVAITELASRV----LKLVKESYK 335
+ L C P+NVA+ +L RV LK+V+ + K
Sbjct: 495 GSQVLVCAPSNVAVDQLCERVHRTGLKVVRLTAK 528
>gi|388851768|emb|CCF54574.1| related to SEN1 protein [Ustilago hordei]
Length = 900
Score = 151 bits (382), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 146/270 (54%), Gaps = 8/270 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL-TS 652
+VIDEAAQ E + IPL+ G +++GD QLP V S+ +D+ G+ +SLF R+
Sbjct: 499 VVIDEAAQAVELSTIIPLRY-GCKQCIMVGDPNQLPPTVISQQADKLGYSQSLFARMFER 557
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK--QYLTGTEFGTYSFI 710
HLL+IQYRMHP ISLFP FY +++ DG ++ +++ +Y F F+
Sbjct: 558 APQEVHLLSIQYRMHPEISLFPAKAFYGSKLQDGPDMAESTHQPWHRYELTRPF---KFL 614
Query: 711 NIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ +HS N E + + + +L IG+V+ Y AQV +++
Sbjct: 615 STKAPESPGPFHSIINKEEANVALALYGRLRTDHAQENFDYRIGIVTMYKAQVFELKQTF 674
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC-NTGGSIGFISKPQRVNVALTRARH 829
Y + ++DGFQG E+DIII+S VR SIGF+ +R+NVA+TRA+
Sbjct: 675 QQRYGKDIVERIDFNTVDGFQGQEKDIIILSCVRSLPKPSSIGFLRDGRRLNVAVTRAKS 734
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQC 859
L+I+G+ L ++IW +LV A+ R+
Sbjct: 735 NLFIIGNAEHLRRGDAIWESLVAAAEQREA 764
>gi|310800151|gb|EFQ35044.1| RNA helicase [Glomerella graminicola M1.001]
Length = 1086
Score = 151 bits (382), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/272 (36%), Positives = 151/272 (55%), Gaps = 11/272 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL +L
Sbjct: 611 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVNL 669
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
LNIQYRMHP +S FP+ FY + +G V+ + + + F +
Sbjct: 670 RLVPIRLNIQYRMHPCLSEFPSNMFYDGSLQNGVTVRERVRRDVDFPWPVVDMPMMFWSN 729
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRK 768
+G E S N E S V K++ + +KA V + + IGV++PY Q +V+ +
Sbjct: 730 LGNEEISASGTSYLNRTEASNVEKVVTRFFKAGV---KPLDIGVITPYEGQRSYIVSTMQ 786
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
G ++ + V+V S+D FQG E+D I++S VR N IGF+S P+R+NVALTRA+
Sbjct: 787 NTG-TFKKESYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALTRAK 845
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCF 860
+ L I+G+ + L S +W L+ K R+C
Sbjct: 846 YGLVIIGNPKVL-SKHELWHHLLVHFKDRKCL 876
Score = 50.8 bits (120), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 12/84 (14%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACTPT 315
LN SQ+ A+ A L + + LI GPPGTGKT T + ++ L ++ + L C P+
Sbjct: 449 LNTSQIAAIKAVLS-------TPLSLIQGPPGTGKTVTSATIIYHLCKMNNGQVLVCAPS 501
Query: 316 NVAITELASRV----LKLVKESYK 335
NVA+ +L R+ LK+V+ + K
Sbjct: 502 NVAVDQLCERIHRTGLKVVRLTAK 525
>gi|19569060|gb|AAL92018.1| UPF1 [Arabidopsis thaliana]
Length = 1243
Score = 151 bits (382), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 148/281 (52%), Gaps = 29/281 (10%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G+ VL+GD CQL ++ K + AG +SLFERL +L
Sbjct: 642 VLIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVTL 700
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF-----GTYS 708
L +QYRMHP++S FP+ FY + +G + E+Q TG +F
Sbjct: 701 GIKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTI----IERQ-TTGIDFPWPVPNRPM 755
Query: 709 FINIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
F + G+E+ N E + V K++ K+ V Q IGV++PY Q I
Sbjct: 756 FFYVQLGQEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPSQ---IGVITPYEGQRAYI 812
Query: 767 RKKIGFEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQR 819
Y ++G ++V S+D FQG E+D II+S VR N IGF++ P+R
Sbjct: 813 -----VNYMARNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 867
Query: 820 VNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
+NVALTRAR+ + ILG+ + L S + +W L+ K +C
Sbjct: 868 LNVALTRARYGIVILGNPKVL-SKQPLWNGLLTHYKEHECL 907
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 12/102 (11%)
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-K 306
+FG LN SQV A+ + L++ + LI GPPGTGKT T + ++ + + +
Sbjct: 469 RFGVPGLPELNASQVNAVKSVLQKP-------ISLIQGPPGTGKTVTSAAIVYHMAKQGQ 521
Query: 307 CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ L C P+NVA+ +LA ++ LK+V+ K ++P+
Sbjct: 522 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 563
>gi|169615114|ref|XP_001800973.1| hypothetical protein SNOG_10712 [Phaeosphaeria nodorum SN15]
gi|160702890|gb|EAT82106.2| hypothetical protein SNOG_10712 [Phaeosphaeria nodorum SN15]
Length = 1078
Score = 151 bits (382), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/274 (38%), Positives = 149/274 (54%), Gaps = 15/274 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + AG +SLFERL L
Sbjct: 603 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAATAGLNQSLFERLVIL 661
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
S L +QYRMHP +S FP+ FY + +G ++ + + + F +
Sbjct: 662 GCSPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTMQERIRRDVDFPWPVADSPMMFWSN 721
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRK 768
+G E S N E V KI+ + +KA V Q IG+++PY Q VV+ +
Sbjct: 722 LGAEEISASGTSYLNRTEAQNVEKIVTRFFKAGV---QPGDIGIITPYEGQRSYVVSSMQ 778
Query: 769 KIG-FEYEN-KDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTR 826
G F+ EN KD V+V S+D FQG E+D II+S VR N IGF+S P+R+NVALTR
Sbjct: 779 ATGSFKKENYKD---VEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTR 835
Query: 827 ARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
A++ L ILG+ + L S +W L+ K R C
Sbjct: 836 AKYGLVILGNPKVL-SKHPLWHYLLLHFKERNCL 868
Score = 56.2 bits (134), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ S K Q KF LN SQ+ A+ + L++ + LI GPPGTGKT T
Sbjct: 419 EVASAPMKIQIPRKFSVPGLPELNGSQINAVKSVLQK-------PLSLIQGPPGTGKTVT 471
Query: 295 VSMLLLTLLRIKC-RTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L +I + L C P+NVA+ +L R+ LK V+ + K +P+
Sbjct: 472 SATIIYHLCKISASQVLVCAPSNVAVDQLCERIHLTGLKTVRVTAKSREDVESPV 526
>gi|354544687|emb|CCE41413.1| hypothetical protein CPAR2_304020 [Candida parapsilosis]
Length = 1049
Score = 151 bits (382), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/276 (34%), Positives = 145/276 (52%), Gaps = 11/276 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DE+ Q E E IP+ + G +L+GD QL ++ + + +AG +SLFERL L
Sbjct: 615 VLVDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDRKAADAGLKQSLFERLVFL 673
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
H L +QYRMHP +S FP+ FY + DG + T
Sbjct: 674 GHIPIRLEVQYRMHPCLSEFPSNMFYEGSLQDGVTNADRLVADSSFPWPVVDTPMMFWAN 733
Query: 714 GGREDFIY--HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
GRE+ +S N VE V +I+ +L+K + +Q IGV++PY Q + + +
Sbjct: 734 YGREELSSSGNSYLNRVEAMNVERIITRLFKDGIKPEQ---IGVITPYEGQRAYLVQFMS 790
Query: 772 FE---YENKDGF-TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+D + V++ S+D FQG E+D II+S VR N SIGF+S P+R+NVALTRA
Sbjct: 791 MNSTLLSKRDEYLEVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVALTRA 850
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
++ L +LG+ R L S +W L+ + + C +
Sbjct: 851 KYGLLVLGNPRAL-SRNRLWNHLLVHFREKGCLVDG 885
Score = 51.2 bits (121), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 14/113 (12%)
Query: 255 STLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACT 313
+ LN SQ A+ + L+R + LI GPPGTGKT T + ++ L ++ K + L C
Sbjct: 452 TELNISQANAVRSVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKLNKEKILVCA 504
Query: 314 PTNVAITELASRV----LKLVKESYK--RDSRSNTPICPLGDILLFGNKDRLK 360
P+NVA+ LA+++ LK+V+ + K D S+ L +I+ +K LK
Sbjct: 505 PSNVAVDHLAAKLDLLGLKVVRLTAKSREDVESSVGHLALHNIVNKTSKGELK 557
>gi|353241966|emb|CCA73744.1| related to regulator of nonsense transcripts 1 [Piriformospora
indica DSM 11827]
Length = 850
Score = 151 bits (381), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 160/308 (51%), Gaps = 41/308 (13%)
Query: 565 FCFKRASLFFST----ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAV 620
FK A + +T SS++++ P+ FL DEA+ E S IPL + G H
Sbjct: 475 MIFKSADVICTTCITAGSSAFRMMDF---PVVFL--DEASMSTEPASLIPL-MHGCKHLA 528
Query: 621 LIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKH-LLNIQYRMHPSISLFPNLQFY 679
LIGD QLP ++ S+++ E G G+SLFERL +L+ QYRMHPSIS FP+ +FY
Sbjct: 529 LIGDHKQLPPVITSELAKEGGLGKSLFERLIEEGSVPSVMLDTQYRMHPSISAFPSDEFY 588
Query: 680 RNQILDGANVKSK--------------SYEKQYLTGTEFGTYSFINIIGGREDFIYHSCR 725
+ DG + + K LTG E FI+ E S
Sbjct: 589 GKALRDGTISPAGGVPATLAPPHSMHLARRKSKLTG-EIPAVLFIHH-DNHEISRDRSRA 646
Query: 726 NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGF----- 780
N+ E+ V +L+ L G + + IG++SPY AQV + K + + D F
Sbjct: 647 NLEEMKIVAAVLEDLLLMNPGLRGR-DIGIISPYVAQVRMLNKMLKEDSSWADAFRDALG 705
Query: 781 --------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLW 832
V++K++DGF+G E++III STVR N+ G IGF++ +R+NVALTRA+ L+
Sbjct: 706 DPRCHELQDVEIKTVDGFEGREKEIIIFSTVRNNSWGHIGFLADRRRMNVALTRAKRALF 765
Query: 833 ILGSERTL 840
++GS TL
Sbjct: 766 VVGSISTL 773
Score = 41.2 bits (95), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 256 TLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTL---LRIKCRTLAC 312
TLN SQ A+ + + L+ GPPGTGKT+T+ L L +++ L C
Sbjct: 325 TLNASQTQAIALMFKER-------LSLVQGPPGTGKTRTIIEALRILKSHFKVEHPLLVC 377
Query: 313 TPTNVAITEL 322
T TNVA+ L
Sbjct: 378 TYTNVAVDNL 387
>gi|302306557|ref|NP_982968.4| ABR022Cp [Ashbya gossypii ATCC 10895]
gi|299788573|gb|AAS50792.4| ABR022Cp [Ashbya gossypii ATCC 10895]
gi|374106171|gb|AEY95081.1| FABR022Cp [Ashbya gossypii FDAG1]
Length = 999
Score = 151 bits (381), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 149/271 (54%), Gaps = 9/271 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IP+ + G VL+GD QL ++ + + +AG +SLFERL SL
Sbjct: 577 VLIDESTQASEPECLIPI-IKGAKQVVLVGDHQQLGPVILDRNAGDAGLKQSLFERLISL 635
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
H L +QYRM+P +S FP+ FY + +G V+ ++
Sbjct: 636 GHVPIRLEVQYRMNPYLSEFPSNMFYEGTLQNGVTVEQRTVVDSSFPWPICDIPMMFWAN 695
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
GRE+ + S N +E +I+ +L+K V +Q IGVV+PY Q I + +
Sbjct: 696 YGREEISANGTSYLNRIEAINCERIITRLFKDGVKPEQ---IGVVTPYEGQRAYIIQYMQ 752
Query: 772 FEYE-NKDGF-TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+KD + TV+V S+D FQG E+D II+S VR N SIGF++ P+R+NVALTRA++
Sbjct: 753 MNGSMDKDLYMTVEVASVDAFQGREKDYIILSCVRANDQQSIGFLTDPRRLNVALTRAKY 812
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCF 860
L ILG+ +L + SIW L+ + + C
Sbjct: 813 GLAILGNPASLCRN-SIWNHLLIHFREKGCL 842
Score = 55.1 bits (131), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 13/90 (14%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRT 309
P+F+ LN SQV A+ L+R + LI GPPGTGKT T + ++ L ++ K R
Sbjct: 412 PNFTK-LNTSQVNAVAHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKMHKERV 463
Query: 310 LACTPTNVAITELASRV----LKLVKESYK 335
L C P+NVA+ LA+++ LK+V+ + K
Sbjct: 464 LVCAPSNVAVDHLAAKLRDMGLKVVRLTAK 493
>gi|357482277|ref|XP_003611424.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
gi|355512759|gb|AES94382.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
Length = 1253
Score = 151 bits (381), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 146/281 (51%), Gaps = 29/281 (10%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD CQL ++ K + AG +SLFERL L
Sbjct: 641 VLIDESTQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 699
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF-----GTYS 708
L +QYRMHP +S FP+ FY + +G V E+Q TG +F
Sbjct: 700 GVKPIRLQVQYRMHPCLSEFPSNSFYEGTLQNGVTVN----ERQS-TGIDFPWPVPNRPM 754
Query: 709 FINIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
F + G+E+ N E + V KI+ K+ V Q IGV++PY Q I
Sbjct: 755 FFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLKSGVVPSQ---IGVITPYEGQRAYI 811
Query: 767 RKKIGFEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQR 819
Y +++G ++V S+D FQG E+D II+S VR N IGF++ P+R
Sbjct: 812 -----VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 866
Query: 820 VNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
+NVALTRAR+ + ILG+ + L S + +W L+ K +C
Sbjct: 867 LNVALTRARYGIVILGNPKVL-SKQPLWNGLLTHYKEHECL 906
Score = 55.5 bits (132), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 12/102 (11%)
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-K 306
+FG LN SQV A+ + L+R + LI GPPGTGKT T + L+ + + +
Sbjct: 468 RFGAPGLPELNASQVYAVKSVLQRP-------ISLIQGPPGTGKTVTSAALVYHMAKQGQ 520
Query: 307 CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ L C P+NVA+ +LA ++ LK+V+ K ++P+
Sbjct: 521 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 562
>gi|256273504|gb|EEU08438.1| Nam7p [Saccharomyces cerevisiae JAY291]
Length = 971
Score = 151 bits (381), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
++IDE+ Q E E IP+ + G +L+GD QL P ++E K +D AG +SLFERL S
Sbjct: 569 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAAD-AGLKQSLFERLIS 626
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L H L +QYRM+P +S FP+ FY + +G ++ ++ G
Sbjct: 627 LGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWA 686
Query: 713 IGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
GRE+ + S N +E +I+ KL++ V +Q IGV++PY Q I + +
Sbjct: 687 NYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQ---IGVITPYEGQRAYILQYM 743
Query: 771 GFEYE-NKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
+KD + V+V S+D FQG E+D II+S VR N +IGF+ P+R+NV LTRA+
Sbjct: 744 QMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 803
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCF 860
+ L ILG+ R+L + ++W L+ + + C
Sbjct: 804 YGLVILGNPRSL-ARNTLWNHLLIHFREKGCL 834
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 15/117 (12%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRT 309
P+F+ LN SQ A+ L+R + LI GPPGTGKT T + ++ L +I K R
Sbjct: 404 PNFAQ-LNSSQSNAVSHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRI 455
Query: 310 LACTPTNVAITELASRV----LKLVKESYK--RDSRSNTPICPLGDILLFGNKDRLK 360
L C P+NVA+ LA+++ LK+V+ + K D S+ L +++ G K LK
Sbjct: 456 LVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLVGRGAKGELK 512
>gi|367008616|ref|XP_003678809.1| hypothetical protein TDEL_0A02660 [Torulaspora delbrueckii]
gi|359746466|emb|CCE89598.1| hypothetical protein TDEL_0A02660 [Torulaspora delbrueckii]
Length = 908
Score = 151 bits (381), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/277 (35%), Positives = 148/277 (53%), Gaps = 21/277 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
++IDE+ Q E E IP+ + G +L+GD QL P ++E K D AG +SLFERL +
Sbjct: 534 VLIDESTQASEPECLIPI-VKGAKQIILVGDHQQLGPVILERKAGD-AGLKQSLFERLIA 591
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L H L +QYRM+P +S FP+ FY + +G ++ ++ G
Sbjct: 592 LGHVPLRLEVQYRMNPYLSDFPSNVFYEGSLQNGVTIEQRTVTNSTFPWPIHGVPMMFWA 651
Query: 713 IGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
GRE+ + S N +E +I+ +L+K V +Q IGV++PY Q I
Sbjct: 652 NYGREEISANGTSYLNRIEAMNCERIITRLFKDGVKPEQ---IGVITPYEGQRAFI---- 704
Query: 771 GFEYENKDG-------FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
+Y +G +V+V S+D FQG E+D II+S VR N IGF+S P+R+NV
Sbjct: 705 -LQYMQMNGSLDRDLYLSVEVASVDAFQGREKDYIILSCVRANEQQIIGFLSDPRRLNVG 763
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
LTRA++ L ILG+ R L S+ ++W L+ + + C
Sbjct: 764 LTRAKYGLVILGNPRAL-STNALWNNLLIHFREKGCL 799
Score = 49.7 bits (117), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 14/133 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
++ +Q + ++F + LN SQ A+ L+R + LI GPPGTGKT T
Sbjct: 352 QIVDIQFEVNLPKEFSIKHFAQLNASQSHAVEHVLQR-------PLSLIQGPPGTGKTVT 404
Query: 295 VSMLLLTLLRIKC-RTLACTPTNVAITELASRV----LKLVKESYK--RDSRSNTPICPL 347
+ ++ L ++ R L C P+NVA+ LA+++ LK+V+ + K D S+ L
Sbjct: 405 SATIVYHLSKMHNERILVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLAL 464
Query: 348 GDILLFGNKDRLK 360
+++ +K LK
Sbjct: 465 HNLVARSSKGELK 477
>gi|190408311|gb|EDV11576.1| helicase [Saccharomyces cerevisiae RM11-1a]
Length = 971
Score = 151 bits (381), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
++IDE+ Q E E IP+ + G +L+GD QL P ++E K +D AG +SLFERL S
Sbjct: 569 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAAD-AGLKQSLFERLIS 626
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L H L +QYRM+P +S FP+ FY + +G ++ ++ G
Sbjct: 627 LGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWA 686
Query: 713 IGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
GRE+ + S N +E +I+ KL++ V +Q IGV++PY Q I + +
Sbjct: 687 NYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQ---IGVITPYEGQRAYILQYM 743
Query: 771 GFEYE-NKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
+KD + V+V S+D FQG E+D II+S VR N +IGF+ P+R+NV LTRA+
Sbjct: 744 QMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 803
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCF 860
+ L ILG+ R+L + ++W L+ + + C
Sbjct: 804 YGLVILGNPRSL-ARNTLWNHLLIHFREKGCL 834
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 15/117 (12%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRT 309
P+F+ LN SQ A+ L+R + LI GPPGTGKT T + ++ L +I K R
Sbjct: 404 PNFAQ-LNSSQSNAVSHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRI 455
Query: 310 LACTPTNVAITELASRV----LKLVKESYK--RDSRSNTPICPLGDILLFGNKDRLK 360
L C P+NVA+ LA+++ LK+V+ + K D S+ L +++ G K LK
Sbjct: 456 LVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLVGRGAKGELK 512
>gi|349580361|dbj|GAA25521.1| K7_Nam7p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 971
Score = 151 bits (381), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
++IDE+ Q E E IP+ + G +L+GD QL P ++E K +D AG +SLFERL S
Sbjct: 569 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAAD-AGLKQSLFERLIS 626
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L H L +QYRM+P +S FP+ FY + +G ++ ++ G
Sbjct: 627 LGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWA 686
Query: 713 IGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
GRE+ + S N +E +I+ KL++ V +Q IGV++PY Q I + +
Sbjct: 687 NYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQ---IGVITPYEGQRAYILQYM 743
Query: 771 GFEYE-NKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
+KD + V+V S+D FQG E+D II+S VR N +IGF+ P+R+NV LTRA+
Sbjct: 744 QMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 803
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCF 860
+ L ILG+ R+L + ++W L+ + + C
Sbjct: 804 YGLVILGNPRSL-ARNTLWNHLLIHFREKGCL 834
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 15/117 (12%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRT 309
P+F+ LN SQ A+ L+R + LI GPPGTGKT T + ++ L +I K R
Sbjct: 404 PNFAQ-LNSSQSNAVSHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRI 455
Query: 310 LACTPTNVAITELASRV----LKLVKESYK--RDSRSNTPICPLGDILLFGNKDRLK 360
L C P+NVA+ LA+++ LK+V+ + K D S+ L +++ G K LK
Sbjct: 456 LVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLVGRGAKGELK 512
>gi|6323726|ref|NP_013797.1| ATP-dependent RNA helicase NAM7 [Saccharomyces cerevisiae S288c]
gi|400350|sp|P30771.1|NAM7_YEAST RecName: Full=ATP-dependent helicase NAM7; AltName:
Full=Nonsense-mediated mRNA decay protein 1; AltName:
Full=Nuclear accommodation of mitochondria 7 protein;
AltName: Full=Up-frameshift suppressor 1
gi|4023|emb|CAA44266.1| helicase [Saccharomyces cerevisiae]
gi|173142|gb|AAA35197.1| zinc finger protein [Saccharomyces cerevisiae]
gi|807962|emb|CAA89226.1| Nam7p [Saccharomyces cerevisiae]
gi|207342353|gb|EDZ70140.1| YMR080Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259148654|emb|CAY81899.1| Nam7p [Saccharomyces cerevisiae EC1118]
gi|285814083|tpg|DAA09978.1| TPA: ATP-dependent RNA helicase NAM7 [Saccharomyces cerevisiae
S288c]
gi|323353063|gb|EGA85363.1| Nam7p [Saccharomyces cerevisiae VL3]
gi|392297240|gb|EIW08340.1| Nam7p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 971
Score = 151 bits (381), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
++IDE+ Q E E IP+ + G +L+GD QL P ++E K +D AG +SLFERL S
Sbjct: 569 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAAD-AGLKQSLFERLIS 626
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L H L +QYRM+P +S FP+ FY + +G ++ ++ G
Sbjct: 627 LGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWA 686
Query: 713 IGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
GRE+ + S N +E +I+ KL++ V +Q IGV++PY Q I + +
Sbjct: 687 NYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQ---IGVITPYEGQRAYILQYM 743
Query: 771 GFEYE-NKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
+KD + V+V S+D FQG E+D II+S VR N +IGF+ P+R+NV LTRA+
Sbjct: 744 QMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 803
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCF 860
+ L ILG+ R+L + ++W L+ + + C
Sbjct: 804 YGLVILGNPRSL-ARNTLWNHLLIHFREKGCL 834
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 15/117 (12%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRT 309
P+F+ LN SQ A+ L+R + LI GPPGTGKT T + ++ L +I K R
Sbjct: 404 PNFAQ-LNSSQSNAVSHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRI 455
Query: 310 LACTPTNVAITELASRV----LKLVKESYK--RDSRSNTPICPLGDILLFGNKDRLK 360
L C P+NVA+ LA+++ LK+V+ + K D S+ L +++ G K LK
Sbjct: 456 LVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLVGRGAKGELK 512
>gi|169763354|ref|XP_001727577.1| regulator of nonsense transcripts 1 [Aspergillus oryzae RIB40]
gi|238489245|ref|XP_002375860.1| regulator of nonsense transcripts, putative [Aspergillus flavus
NRRL3357]
gi|83770605|dbj|BAE60738.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220698248|gb|EED54588.1| regulator of nonsense transcripts, putative [Aspergillus flavus
NRRL3357]
gi|391869636|gb|EIT78831.1| RNA helicase nonsense mRNA reducing factor [Aspergillus oryzae
3.042]
Length = 1072
Score = 151 bits (381), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 151/273 (55%), Gaps = 13/273 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 581 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 639
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG-ANVKSKSYEKQYLTGTEFGTYSFINI 712
S LN+QYRMHP +S FP+ FY + +G ++++ + + F +
Sbjct: 640 GCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGISSIERLRRDVDFPWPISDNPMMFWSN 699
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRK 768
+G E S N E + V KI+ + +KA V Q IG+++PY Q +V+ +
Sbjct: 700 LGNEEISASGTSYLNRTEATNVEKIVTRFFKAGV---QPGDIGIITPYEGQRSYIVSSMQ 756
Query: 769 KIG-FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
G F+ E+ ++V S+D FQG E+D II+S VR N IGF+S P+R+NVALTRA
Sbjct: 757 ATGTFKKEHYK--EIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 814
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCF 860
++ L ILG+ + L S +W L+ K R C
Sbjct: 815 KYGLAILGNPKVL-SKHPLWNCLLQHFKERHCL 846
Score = 57.0 bits (136), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q +KF LN SQ+ A+ + L+R + LI GPPGTGKT T
Sbjct: 397 EVAAAPMKTQMPKKFSVPGLPELNGSQINAVKSVLQR-------PLSLIQGPPGTGKTVT 449
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L ++ + L C P+NVA+ +L R+ LK V+ + K +P+
Sbjct: 450 SATIIYHLAKLNGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPV 504
>gi|302309402|ref|NP_986774.2| AGR108Cp [Ashbya gossypii ATCC 10895]
gi|299788342|gb|AAS54598.2| AGR108Cp [Ashbya gossypii ATCC 10895]
gi|374110024|gb|AEY98929.1| FAGR108Cp [Ashbya gossypii FDAG1]
Length = 930
Score = 150 bits (380), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/284 (35%), Positives = 146/284 (51%), Gaps = 34/284 (11%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DEA Q E+ + +PL LAGI VL+GDE QLP S+ SLF R+ +
Sbjct: 651 VIMDEATQATEASTLVPLALAGIQKLVLVGDEKQLPPFALSRNPKT-----SLFNRVVTR 705
Query: 654 NHSKHL--LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
+ ++ L L IQYRMHP+I FPN+QFY N++ +G + +S+ G + FI+
Sbjct: 706 SPAEDLQFLKIQYRMHPAICEFPNMQFYDNRLRNGVTPEDRSW-----LGVQEPVV-FID 759
Query: 712 IIGGREDFIYHSCR------NIVEVSAVIKILQKLY-KAWVGSKQKVSIGVVSPYTAQVV 764
I E + N+ E V L+KL K V Q IGV++PY AQ
Sbjct: 760 IPSSAERRGQAAASQDMSWCNLAEADFVCATLRKLVSKKHVPPSQ---IGVITPYVAQRD 816
Query: 765 AIRKKIG-----------FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGF 813
AI ++ E + D + V S+D FQG E II S VR N+ G +GF
Sbjct: 817 AIASRLARDTTLAAHVTMHEVADPDSKQLMVASVDAFQGHERAFIIFSCVRSNSDGQLGF 876
Query: 814 ISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
+S +R+NVALTRAR+ L ++G TL IW A + ++R
Sbjct: 877 VSDRRRMNVALTRARNGLIVVGHADTLAKGSKIWRAYITYLRSR 920
>gi|151946238|gb|EDN64469.1| nuclear accommodation of mitochondria [Saccharomyces cerevisiae
YJM789]
Length = 971
Score = 150 bits (380), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
++IDE+ Q E E IP+ + G +L+GD QL P ++E K +D AG +SLFERL S
Sbjct: 569 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAAD-AGLKQSLFERLIS 626
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L H L +QYRM+P +S FP+ FY + +G ++ ++ G
Sbjct: 627 LGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWA 686
Query: 713 IGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
GRE+ + S N +E +I+ KL++ V +Q IGV++PY Q I + +
Sbjct: 687 NYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQ---IGVITPYEGQRAYILQYM 743
Query: 771 GFEYE-NKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
+KD + V+V S+D FQG E+D II+S VR N +IGF+ P+R+NV LTRA+
Sbjct: 744 QMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 803
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCF 860
+ L ILG+ R+L + ++W L+ + + C
Sbjct: 804 YGLVILGNPRSL-ARNTLWNHLLIHFREKGCL 834
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 15/117 (12%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRT 309
P+F+ LN SQ A+ L+R + LI GPPGTGKT T + ++ L +I K R
Sbjct: 404 PNFAQ-LNSSQSNAVSHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRI 455
Query: 310 LACTPTNVAITELASRV----LKLVKESYK--RDSRSNTPICPLGDILLFGNKDRLK 360
L C P+NVA+ LA+++ LK+V+ + K D S+ L +++ G K LK
Sbjct: 456 LVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLVGRGAKGELK 512
>gi|323307726|gb|EGA60989.1| Nam7p [Saccharomyces cerevisiae FostersO]
Length = 971
Score = 150 bits (380), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
++IDE+ Q E E IP+ + G +L+GD QL P ++E K +D AG +SLFERL S
Sbjct: 569 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAAD-AGLKQSLFERLIS 626
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L H L +QYRM+P +S FP+ FY + +G ++ ++ G
Sbjct: 627 LGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWA 686
Query: 713 IGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
GRE+ + S N +E +I+ KL++ V +Q IGV++PY Q I + +
Sbjct: 687 NYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQ---IGVITPYEGQRAYILQYM 743
Query: 771 GFEYE-NKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
+KD + V+V S+D FQG E+D II+S VR N +IGF+ P+R+NV LTRA+
Sbjct: 744 QMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 803
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCF 860
+ L ILG+ R+L + ++W L+ + + C
Sbjct: 804 YGLVILGNPRSL-ARNTLWNHLLIHFREKGCL 834
Score = 55.5 bits (132), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 15/117 (12%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRT 309
P+F+ LN SQ A+ L+R + LI GPPGTGKT T + ++ L +I K R
Sbjct: 404 PNFAQ-LNSSQSNAVSHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRI 455
Query: 310 LACTPTNVAITELASRV----LKLVKESYK--RDSRSNTPICPLGDILLFGNKDRLK 360
L C P+NVA+ LA+++ LK+V+ + K D S+ L +++ G K LK
Sbjct: 456 LVCXPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLVGRGAKGELK 512
>gi|154305574|ref|XP_001553189.1| hypothetical protein BC1G_08556 [Botryotinia fuckeliana B05.10]
gi|347828532|emb|CCD44229.1| similar to regulator of nonsense transcripts 1 [Botryotinia
fuckeliana]
Length = 1100
Score = 150 bits (380), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 156/291 (53%), Gaps = 14/291 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 614 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVHL 672
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
+ LN+QYRMHP +S FP+ FY + +G ++ + + + F +
Sbjct: 673 GLNPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTMQQRLRRDVDFPWPVADTPMMFWSN 732
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ----VVAIR 767
+G E S N E S V KI+ + +KA V Q IGV++PY Q V +++
Sbjct: 733 LGNEEISASGTSYLNRTEASNVEKIVTRFFKAGV---QPGDIGVITPYEGQRSYVVTSMQ 789
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
F+ E+ V+V S+D FQG E+D II+S VR N IGF+S P+R+NVALTRA
Sbjct: 790 NAGSFKKEHYK--EVEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 847
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
++ L I+G+ + L S +W L+ K R C NL + L+ S+
Sbjct: 848 KYGLVIVGNPKVL-SKHPLWHYLLQHFKDRSCLVEG-PLSNLQTSLLQFSR 896
Score = 54.7 bits (130), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q +KF LN SQ+ A+ + L++ + LI GPPGTGKT T
Sbjct: 430 EVAAAPMKIQMPKKFSVPGLPELNSSQISAVKSVLQKP-------LSLIQGPPGTGKTVT 482
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYK 335
+ ++ L ++ + L C P+NVA+ +L R+ LK+V+ + K
Sbjct: 483 SATVIYHLAKVNGGQVLVCAPSNVAVDQLCERIHRTQLKVVRLTAK 528
>gi|401624314|gb|EJS42376.1| nam7p [Saccharomyces arboricola H-6]
Length = 971
Score = 150 bits (380), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
++IDE+ Q E E IP+ + G +L+GD QL P ++E K +D AG +SLFERL S
Sbjct: 569 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAAD-AGLKQSLFERLIS 626
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L H L +QYRM+P +S FP+ FY + +G ++ ++ G
Sbjct: 627 LGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTIPNSKFPWPIRGIPMMFWA 686
Query: 713 IGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
GRE+ + S N +E +I+ KL++ V +Q IGV++PY Q I + +
Sbjct: 687 NYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQ---IGVITPYEGQRAYILQYM 743
Query: 771 GFEYE-NKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
+KD + V+V S+D FQG E+D II+S VR N +IGF+ P+R+NV LTRA+
Sbjct: 744 QMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 803
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCF 860
+ L ILG+ R+L + ++W L+ + + C
Sbjct: 804 YGLVILGNPRSL-ARNTLWNHLLIHFREKGCL 834
Score = 54.3 bits (129), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 247 EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI- 305
++F S + LN SQ A+ L+R + LI GPPGTGKT T + ++ L +I
Sbjct: 399 KEFSISNFAQLNSSQSNAVSHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIH 451
Query: 306 KCRTLACTPTNVAITELASRV----LKLVKESYK--RDSRSNTPICPLGDILLFGNKDRL 359
+ R L C P+NVA+ LA+++ LK+V+ + K D S+ L +++ G K L
Sbjct: 452 RDRILVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLVGRGAKGEL 511
Query: 360 K 360
K
Sbjct: 512 K 512
>gi|340914927|gb|EGS18268.1| eliminates the production of nonsense-containing-like protein
[Chaetomium thermophilum var. thermophilum DSM 1495]
Length = 1098
Score = 150 bits (380), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/283 (36%), Positives = 150/283 (53%), Gaps = 27/283 (9%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G AVL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 619 VLIDESTQSAEPECMIPLVL-GCKQAVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKL 677
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFG------TY 707
N + LN+QYRMHP +S FP+ FY + +G ++ ++ +F
Sbjct: 678 NLTPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGV-----THAERIRKDVDFPWPVADMPM 732
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
F + +G E S N E + V K++ + +KA V + IGV++PY Q
Sbjct: 733 MFWSNLGSEEISASGTSYLNRTEAANVEKVVTRFFKAGV---KPSDIGVITPYEGQ---- 785
Query: 767 RKKIGFEYENKDGFT------VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRV 820
R I +N F V+V S+D FQG E+D I++S VR N IGF+S P+R+
Sbjct: 786 RSYIVSTMQNTGTFKKEWYKEVEVASVDAFQGREKDYIVLSCVRSNDNQGIGFLSDPRRL 845
Query: 821 NVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
NVALTRA++ L I+G+ + L E +W L+ K R+C
Sbjct: 846 NVALTRAKYGLVIIGNPKVLAKHE-LWHHLLVHFKDRKCLVEG 887
Score = 51.2 bits (121), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 12/106 (11%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ K Q +KF LN SQ+ A+ L + + LI GPPGTGKT T
Sbjct: 435 EVAVAPMKTQLPKKFHVPGLPELNHSQITAIKTVLS-------TPLSLIQGPPGTGKTVT 487
Query: 295 VSMLLLTLLRI-KCRTLACTPTNVAITELASRV----LKLVKESYK 335
+ ++ L ++ + L C P+NVA+ +L R+ LK+V+ + K
Sbjct: 488 SATIIYHLCKMNNSQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAK 533
>gi|237838453|ref|XP_002368524.1| regulator of nonsense transcripts UPF1, putative [Toxoplasma gondii
ME49]
gi|211966188|gb|EEB01384.1| regulator of nonsense transcripts UPF1, putative [Toxoplasma gondii
ME49]
Length = 1449
Score = 150 bits (380), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 139/263 (52%), Gaps = 27/263 (10%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E E IP+ L G VLIGD CQL +V SK + AG SLF RL +L
Sbjct: 788 VVIDEAAQATEPECLIPIVL-GAKQVVLIGDHCQLGPVVLSKKAAAAGLATSLFSRLLAL 846
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
H L +QYRMHP++S FP+ FY ++ +G + ++Y Q G + F
Sbjct: 847 GHRPLRLKVQYRMHPALSFFPSYFFYEGELQNGVTMTERTYFHQGP-----GDHRFPWPN 901
Query: 714 GGREDFIYHSCR------------NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTA 761
R F YHS N VE S + KI+ L K + + Q IGV++PY
Sbjct: 902 EERPMFFYHSTASEEISGSGTSYVNRVEASNIEKIVTFLLKCGLKASQ---IGVITPYDG 958
Query: 762 QVVAIRKKIGFEYENKDG----FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKP 817
Q I F+ + G ++V S+D FQG E+D I++S VR N+ IGF++
Sbjct: 959 QRAHISSL--FQRQTTLGQAAFADLEVASVDAFQGREKDFILLSCVRSNSNTGIGFLADS 1016
Query: 818 QRVNVALTRARHCLWILGSERTL 840
+R+NVA+TRA++ L I G+ L
Sbjct: 1017 RRLNVAMTRAKYGLIICGNATVL 1039
>gi|358395794|gb|EHK45181.1| hypothetical protein TRIATDRAFT_243374 [Trichoderma atroviride IMI
206040]
Length = 1083
Score = 150 bits (380), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 151/277 (54%), Gaps = 21/277 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG RSLFERL +L
Sbjct: 610 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNRSLFERLINL 668
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFG------TY 707
+ L QYRMHP +S FP+ FY + +G ++E++ +F
Sbjct: 669 KINPIPLKTQYRMHPCLSEFPSNMFYDGTLQNGI-----THEQRVRKDVDFPWPVTEMPM 723
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---V 763
F + IG E S N E S V K + + +KA V + IGV++PY Q +
Sbjct: 724 MFWSNIGHEEISTSGTSYLNRTEASNVEKTVTRFFKAGV---RPSEIGVITPYEGQRSYI 780
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
V+ + G Y+ + V+V S+D FQG E+D I++S VR N IGF+S P+R+NVA
Sbjct: 781 VSTMQNSG-TYKKEMYKDVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVA 839
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
LTRA++ L ILG+ + L S +W L+ K R+CF
Sbjct: 840 LTRAKYGLVILGNPKVL-SKHELWHNLLAHFKDRKCF 875
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 12/84 (14%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPT 315
LN+ QV A+ A L+R + LI GPPGTGKT T + ++ L + + L C P+
Sbjct: 448 LNQGQVDAIKAVLQRP-------LSLIQGPPGTGKTVTSATIIYHLAKTSGSQVLVCAPS 500
Query: 316 NVAITELASRV----LKLVKESYK 335
NVA+ +L R+ LK+V+ + K
Sbjct: 501 NVAVDQLCERIHRTGLKVVRLTAK 524
>gi|212532107|ref|XP_002146210.1| nonsense transcript regulator, putative [Talaromyces marneffei ATCC
18224]
gi|210071574|gb|EEA25663.1| nonsense transcript regulator, putative [Talaromyces marneffei ATCC
18224]
Length = 1093
Score = 150 bits (380), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 151/273 (55%), Gaps = 13/273 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 604 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 662
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
S LN+QYRMHP +S FP+ FY + +G ++ + + + F +
Sbjct: 663 GCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVSMAQRLRRDVDFPWPVAENPMMFWSN 722
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRK 768
+G E S N E + V KI+ + +KA V Q IG+++PY Q VV+ +
Sbjct: 723 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGV---QPSGIGIITPYEGQRSYVVSSMQ 779
Query: 769 KIG-FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
G F+ E+ ++V S+D FQG E+D I++S VR N IGF+S P+R+NVALTRA
Sbjct: 780 ATGTFKKEHYK--EIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRA 837
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCF 860
++ + ILG+ + L S +W L+ K R+C
Sbjct: 838 KYGVVILGNPKVL-SKHPLWNYLLLHFKERKCL 869
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q +KF LN SQ+ A+ + L++ + LI GPPGTGKT T
Sbjct: 420 EVAAAPMKTQMPKKFSVPGLPELNGSQINAVKSVLQKP-------LSLIQGPPGTGKTVT 472
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L +I + L C P+NVA+ +L R+ LK V+ + K +P+
Sbjct: 473 SATIIYHLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPV 527
>gi|333038075|gb|AEF13567.1| hypothetical protein PICST_73544 [Scheffersomyces stipitis CBS
6054]
Length = 1021
Score = 150 bits (379), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 148/276 (53%), Gaps = 11/276 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IP+ + G +L+GD QL ++ K + +AG +SLFERL L
Sbjct: 596 VLIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDKKAGDAGLRQSLFERLVIL 654
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
H L +QYRM+P +S FP+ FY + +G + E + +
Sbjct: 655 GHVPIRLEVQYRMNPCLSEFPSNIFYEGSLQNGVTSAQRRIESSTFPWPVYDSPMMFWAN 714
Query: 714 GGREDFIY--HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
GRE+ +S N VE V KI+ +L+K V ++Q IGV++PY Q + +
Sbjct: 715 YGREEISGSGNSYLNRVEAMNVEKIITRLFKDGVKAEQ---IGVITPYEGQRAYLVSYMS 771
Query: 772 FE---YENKDGF-TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
E K+ + V+V S+D FQG E+D II+S VR N+ IGF+S P+R+NVALTRA
Sbjct: 772 INSTLAEFKEQYLEVEVTSVDAFQGREKDYIILSCVRANSSHQIGFLSDPRRLNVALTRA 831
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
++ L +LG+ R L + +W L+ + + C +
Sbjct: 832 KYGLVVLGNPRALCRNR-LWNQLLIHFREKGCLVDG 866
Score = 53.1 bits (126), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 12/102 (11%)
Query: 244 QWDEKFGPSFS----STLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLL 299
++D K FS + LN SQ+ A+ + L+R + LI GPPGTGKT T + ++
Sbjct: 418 EFDVKLPQRFSHPNLTELNVSQINAVRSVLQR-------PLSLIQGPPGTGKTVTSATII 470
Query: 300 LTLLRI-KCRTLACTPTNVAITELASRVLKLVKESYKRDSRS 340
L ++ K + L C P+NVA+ LA ++ L + + +RS
Sbjct: 471 YHLTKLNKEKILVCAPSNVAVDHLAEKLDSLGLKVLRLTARS 512
>gi|242774708|ref|XP_002478495.1| nonsense transcript regulator, putative [Talaromyces stipitatus
ATCC 10500]
gi|218722114|gb|EED21532.1| nonsense transcript regulator, putative [Talaromyces stipitatus
ATCC 10500]
Length = 1093
Score = 150 bits (379), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 151/273 (55%), Gaps = 13/273 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 604 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 662
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
S LN+QYRMHP +S FP+ FY + +G ++ + + + F +
Sbjct: 663 GCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVSMAQRLRRDVDFPWPVAENPMMFWSN 722
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRK 768
+G E S N E + V KI+ + +KA V Q IG+++PY Q VV+ +
Sbjct: 723 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGV---QPSDIGIITPYEGQRSYVVSSMQ 779
Query: 769 KIG-FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
G F+ E+ ++V S+D FQG E+D I++S VR N IGF+S P+R+NVALTRA
Sbjct: 780 ATGTFKKEHYK--EIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRA 837
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCF 860
++ + ILG+ + L S +W L+ K R+C
Sbjct: 838 KYGVVILGNPKVL-SKHPLWNYLLLHFKERKCL 869
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q +KF LN SQ+ A+ + L++ + LI GPPGTGKT T
Sbjct: 420 EVAAAPMKTQMPKKFSVPGLPELNGSQINAVKSVLQKP-------LSLIQGPPGTGKTVT 472
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L +I + L C P+NVA+ +L R+ LK V+ + K +P+
Sbjct: 473 SATIIYHLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPV 527
>gi|414886784|tpg|DAA62798.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1205
Score = 150 bits (379), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 147/281 (52%), Gaps = 29/281 (10%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G+ VL+GD CQL ++ K + AG +SLFERL L
Sbjct: 671 VLIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVIL 729
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF-----GTYS 708
L +QYRMHP +S FP+ FY + +G V + + +G +F
Sbjct: 730 GVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNER-----HSSGIDFPWPVPNRPM 784
Query: 709 FINIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
F + G+E+ N E + V KI+ ++ V Q IGV++PY Q I
Sbjct: 785 FFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ---IGVITPYEGQRAYI 841
Query: 767 RKKIGFEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQR 819
Y +++G ++V S+D FQG E+D II+S VR N IGF++ P+R
Sbjct: 842 -----VNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 896
Query: 820 VNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
+NVALTRAR+ + ILG+ + L S + +W +L+ K +C
Sbjct: 897 LNVALTRARYGIVILGNPKVL-SKQPLWNSLLTHYKEHECL 936
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 12/102 (11%)
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-K 306
+FG LN SQV A+ + L++ V LI GPPGTGKT T ++ + + +
Sbjct: 498 RFGAPGLPELNASQVLAVKSVLQKP-------VSLIQGPPGTGKTVTSGAIVYHMAKQGQ 550
Query: 307 CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ L C P+NVA+ +LA ++ LK+V+ K ++P+
Sbjct: 551 GQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPV 592
>gi|323332050|gb|EGA73461.1| Nam7p [Saccharomyces cerevisiae AWRI796]
Length = 930
Score = 150 bits (379), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
++IDE+ Q E E IP+ + G +L+GD QL P ++E K +D AG +SLFERL S
Sbjct: 569 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAAD-AGLKQSLFERLIS 626
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L H L +QYRM+P +S FP+ FY + +G ++ ++ G
Sbjct: 627 LGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWA 686
Query: 713 IGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
GRE+ + S N +E +I+ KL++ V +Q IGV++PY Q I + +
Sbjct: 687 NYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQ---IGVITPYEGQRAYILQYM 743
Query: 771 GFEYE-NKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
+KD + V+V S+D FQG E+D II+S VR N +IGF+ P+R+NV LTRA+
Sbjct: 744 QMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 803
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCF 860
+ L ILG+ R+L + ++W L+ + + C
Sbjct: 804 YGLVILGNPRSL-ARNTLWNHLLIHFREKGCL 834
Score = 55.5 bits (132), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 15/117 (12%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRT 309
P+F+ LN SQ A+ L+R + LI GPPGTGKT T + ++ L +I K R
Sbjct: 404 PNFAQ-LNSSQSNAVSHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRI 455
Query: 310 LACTPTNVAITELASRV----LKLVKESYK--RDSRSNTPICPLGDILLFGNKDRLK 360
L C P+NVA+ LA+++ LK+V+ + K D S+ L +++ G K LK
Sbjct: 456 LVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLVGRGAKGELK 512
>gi|323336281|gb|EGA77552.1| Nam7p [Saccharomyces cerevisiae Vin13]
Length = 930
Score = 150 bits (379), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
++IDE+ Q E E IP+ + G +L+GD QL P ++E K +D AG +SLFERL S
Sbjct: 569 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAAD-AGLKQSLFERLIS 626
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L H L +QYRM+P +S FP+ FY + +G ++ ++ G
Sbjct: 627 LGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWA 686
Query: 713 IGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
GRE+ + S N +E +I+ KL++ V +Q IGV++PY Q I + +
Sbjct: 687 NYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQ---IGVITPYEGQRAYILQYM 743
Query: 771 GFEYE-NKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
+KD + V+V S+D FQG E+D II+S VR N +IGF+ P+R+NV LTRA+
Sbjct: 744 QMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 803
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCF 860
+ L ILG+ R+L + ++W L+ + + C
Sbjct: 804 YGLVILGNPRSL-ARNTLWNHLLIHFREKGCL 834
Score = 55.5 bits (132), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 15/117 (12%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRT 309
P+F+ LN SQ A+ L+R + LI GPPGTGKT T + ++ L +I K R
Sbjct: 404 PNFAQ-LNSSQSNAVSHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRI 455
Query: 310 LACTPTNVAITELASRV----LKLVKESYK--RDSRSNTPICPLGDILLFGNKDRLK 360
L C P+NVA+ LA+++ LK+V+ + K D S+ L +++ G K LK
Sbjct: 456 LVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLVGRGAKGELK 512
>gi|224010575|ref|XP_002294245.1| hypothetical protein THAPSDRAFT_264317 [Thalassiosira pseudonana
CCMP1335]
gi|220970262|gb|EED88600.1| hypothetical protein THAPSDRAFT_264317 [Thalassiosira pseudonana
CCMP1335]
Length = 608
Score = 150 bits (379), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 160/334 (47%), Gaps = 8/334 (2%)
Query: 540 VLRNLWNSLDELNLPCTTSKLV--LEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVID 597
+L+N N+ E +S LV LE + +T S+ +VID
Sbjct: 220 ILQNAANTRREGGGIEPSSSLVHELETHVLNSNHIILTTLGSAGGRSIEAASKFKVIVID 279
Query: 598 EAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSK 657
EAAQ E + + LQL G +HA+L+GD QLPA + S + RSLF+RL H
Sbjct: 280 EAAQSAEPSTLVALQL-GSSHAILVGDPQQLPATIFSVSGRSTKYDRSLFQRLEECRHPV 338
Query: 658 HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGT--EFGTYSFINI--I 713
+LN QYRMHP IS FP FY +LDG NV+ + T +F NI +
Sbjct: 339 MMLNTQYRMHPIISEFPRHIFYEGMLLDGPNVQKPDFGGTLKTAIVGKFPHIKPFNIFDL 398
Query: 714 GGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFE 773
+E+ S N E + + L + G K + V++PY+ Q + + +
Sbjct: 399 DSKEERDGTSLSNTNEAQLALHLYCALDRETNGLLAKSRVAVITPYSQQTALLHRLFEEQ 458
Query: 774 YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWI 833
+ N V++ ++D FQG E ++I S VR IGF+S QR+NVALTRA++ L++
Sbjct: 459 FGNAYSSRVEISTVDAFQGREAGLVIYSCVRAAGSKGIGFLSDVQRMNVALTRAKYFLFV 518
Query: 834 LGSERTLISSESIWGALVCDAKARQCFFNADEER 867
+ R+++ + W LV A+ + +R
Sbjct: 519 IARCRSIMVN-PYWRNLVGYAREKSAIIAVPMDR 551
>gi|221484204|gb|EEE22500.1| regulator of nonsense transcripts 1 protein, putative [Toxoplasma
gondii GT1]
Length = 1449
Score = 150 bits (379), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 139/263 (52%), Gaps = 27/263 (10%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E E IP+ L G VLIGD CQL +V SK + AG SLF RL +L
Sbjct: 788 VVIDEAAQATEPECLIPIVL-GAKQVVLIGDHCQLGPVVLSKKAAAAGLATSLFSRLLAL 846
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
H L +QYRMHP++S FP+ FY ++ +G + ++Y Q G + F
Sbjct: 847 GHRPLRLKVQYRMHPALSFFPSYFFYEGELQNGVTMTERTYFHQGP-----GDHRFPWPN 901
Query: 714 GGREDFIYHSCR------------NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTA 761
R F YHS N +E S + KI+ L K + + Q IGV++PY
Sbjct: 902 EERPMFFYHSTASEEISGSGTSYVNRIEASNIEKIVTFLLKCGLKASQ---IGVITPYDG 958
Query: 762 QVVAIRKKIGFEYENKDG----FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKP 817
Q I F+ + G ++V S+D FQG E+D I++S VR N+ IGF++
Sbjct: 959 QRAHISSL--FQRQTTLGQAAFADLEVASVDAFQGREKDFILLSCVRSNSNTGIGFLADS 1016
Query: 818 QRVNVALTRARHCLWILGSERTL 840
+R+NVA+TRA++ L I G+ L
Sbjct: 1017 RRLNVAMTRAKYGLIICGNATVL 1039
>gi|414886785|tpg|DAA62799.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1251
Score = 150 bits (379), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 147/281 (52%), Gaps = 29/281 (10%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G+ VL+GD CQL ++ K + AG +SLFERL L
Sbjct: 671 VLIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVIL 729
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF-----GTYS 708
L +QYRMHP +S FP+ FY + +G V + + +G +F
Sbjct: 730 GVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNER-----HSSGIDFPWPVPNRPM 784
Query: 709 FINIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
F + G+E+ N E + V KI+ ++ V Q IGV++PY Q I
Sbjct: 785 FFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ---IGVITPYEGQRAYI 841
Query: 767 RKKIGFEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQR 819
Y +++G ++V S+D FQG E+D II+S VR N IGF++ P+R
Sbjct: 842 -----VNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 896
Query: 820 VNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
+NVALTRAR+ + ILG+ + L S + +W +L+ K +C
Sbjct: 897 LNVALTRARYGIVILGNPKVL-SKQPLWNSLLTHYKEHECL 936
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 12/102 (11%)
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-K 306
+FG LN SQV A+ + L++ V LI GPPGTGKT T ++ + + +
Sbjct: 498 RFGAPGLPELNASQVLAVKSVLQKP-------VSLIQGPPGTGKTVTSGAIVYHMAKQGQ 550
Query: 307 CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ L C P+NVA+ +LA ++ LK+V+ K ++P+
Sbjct: 551 GQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPV 592
>gi|328865229|gb|EGG13615.1| helicase [Dictyostelium fasciculatum]
Length = 1162
Score = 150 bits (379), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 118/345 (34%), Positives = 167/345 (48%), Gaps = 25/345 (7%)
Query: 529 QLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVL----EDFCFKRASLFFSTASSSYKLH 584
QL Q L + L ELN LVL E K A + +T +
Sbjct: 645 QLDQYGKGVLRKFKALREETGELNPEDERKFLVLKGSLERNILKEADVICTTCVGAGDPR 704
Query: 585 SVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGR 644
+IK +++IDEA Q E E IPL L G VL+GD CQL ++ K EAG
Sbjct: 705 LRDIK-FPYVLIDEATQASEPECLIPLVL-GARQVVLVGDHCQLGPVLLCKKVQEAGLSL 762
Query: 645 SLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF 704
SLFERL L H L QYRMHP++S FP+ FY Q+++ + + + ++
Sbjct: 763 SLFERLIHLGHHPFRLTTQYRMHPALSEFPSNTFYEGQLVNEISYRDRVTNNGFVWPHPN 822
Query: 705 GTYSFINIIGGRE------DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSP 758
F N G E FI N E + KI+ + + +G+K IG+++P
Sbjct: 823 RPMFFHNSTGHEEISSSGTSFI-----NRTEATLCEKIVTRFLE--LGTKPS-QIGIITP 874
Query: 759 YTAQ---VVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFIS 815
Y Q +V ++ G + ++V S+D FQG E+D II+S VR N IGF+
Sbjct: 875 YEGQRSFLVNNMQRTG-RLPSDLYKEIEVASVDSFQGREKDFIILSCVRSNENQGIGFLQ 933
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
P+R+NVALTRAR+ L ILG+ R L S + +W L+ KA +
Sbjct: 934 DPRRLNVALTRARYGLIILGNARVL-SRDLLWNNLISHFKANEVL 977
Score = 50.1 bits (118), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 15/96 (15%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTL----LRIKCRTLAC 312
LN SQ+ A + L+ S + LI GPPGTGKT + L+ L ++ K + L C
Sbjct: 546 LNASQISAACSVLK-------SPLSLIQGPPGTGKTLVSAFLVHHLVNHGIKGKEKLLVC 598
Query: 313 TPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
P+NVAI +LA ++ LK+V+ K ++P+
Sbjct: 599 APSNVAIDQLAGKLHSVGLKVVRLCSKLREEVSSPV 634
>gi|440492195|gb|ELQ74785.1| tRNA-splicing endonuclease positive effector (SEN1), partial
[Trachipleistophora hominis]
Length = 525
Score = 150 bits (379), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 122/363 (33%), Positives = 184/363 (50%), Gaps = 43/363 (11%)
Query: 528 LQLHQRRSECLSVLR-----NLWNSLDELNLPCTTSKLV--------LEDF--------- 565
L++ R E L VLR N+ ++L L L C K + L +F
Sbjct: 169 LRMKGREEEKLRVLRIGVQNNIDDNLKMLTLDCIIEKELEERKNRAGLTNFEVTNSERTK 228
Query: 566 ----CFKRASLFFSTASSSYK-LHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAV 620
KR+++ +T SSS K L V + LVIDEA Q E+ + IPL+ V
Sbjct: 229 RKFELLKRSNVVCATLSSSAKELIKVANIDFDILVIDEACQSVETSTLIPLKFNP-TKVV 287
Query: 621 LIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYR 680
L+GD QLP V IS+ + +SLF RL S LLN+QYRMHP+I FPN FY
Sbjct: 288 LVGDPKQLPPTV---ISNCKPYEQSLFVRLQKTYQSV-LLNVQYRMHPTIVEFPNQYFYD 343
Query: 681 NQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKL 740
++ +VK + Q + SFI + G Y S N+ E + I+ +L
Sbjct: 344 KRLQTHKSVKKRENPYQNVV----PPISFIQVNGEERTDSYFSFYNVAEARYIGNIISEL 399
Query: 741 YKAWVGSKQKVSIGVVSPYTAQVVAIRKK-IGFEYENKDGFTVKVKSIDGFQGGEEDIII 799
K IG+++PY AQ+ I++ +G + D V V ++DGFQG E+D+I+
Sbjct: 400 MKNVKNYDLSNKIGIITPYKAQMKKIKEVLLGIRKDILD--FVCVNTVDGFQGQEKDVIL 457
Query: 800 ISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQC 859
ISTV+ +IGF+S +R+NV++TRA+H L I+G+ + L S+ + W +++ + +
Sbjct: 458 ISTVK---SKNIGFLSDLRRINVSITRAKHSLIIIGNTKVL-STSNAWKSMLSHYRKKNL 513
Query: 860 FFN 862
FN
Sbjct: 514 VFN 516
Score = 43.5 bits (101), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 15/60 (25%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKC---------------RTLACTPTNVAITELASRV 326
LI GPPGTGKTK + L+ +L R L C P+N A+ ELA R+
Sbjct: 107 LIHGPPGTGKTKMIVSLIESLFSAPIISALKSKMFITNREPRILICAPSNAAVDELAKRI 166
>gi|358057220|dbj|GAA96829.1| hypothetical protein E5Q_03501 [Mixia osmundae IAM 14324]
Length = 925
Score = 150 bits (379), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 106/298 (35%), Positives = 154/298 (51%), Gaps = 14/298 (4%)
Query: 560 LVLEDFCFKRASLFFSTASSSYKLHSVEIK-PLNFLVIDEAAQLKESESTIPLQLAGINH 618
L+ D C + FST + H I P+ F IDEAAQ E+ + +PL + G
Sbjct: 605 LIWADIC-SNVDVIFSTCLGASVSHVASIDFPIVF--IDEAAQCNEASTLVPL-MKGSQQ 660
Query: 619 AVLIGDECQLPAMVESKISDEAGFGRSLFERL-TSLNHSKHLLNIQYRMHPSISLFPNLQ 677
VLIGD QLP++ S + + GF SLFERL S +L+ QYRMHP IS FPN+
Sbjct: 661 LVLIGDHKQLPSIAMSPDATQEGFNISLFERLMVSKRVPSVMLDTQYRMHPDISKFPNMA 720
Query: 678 FYRNQILDGANV---KSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVI 734
FYR Q+ D + K + ++ + +FIN G E S N E +
Sbjct: 721 FYRGQLRDAPSTLKSKQAAIRSRFSPAGKSSALTFINC-DGLEQKEGKSYINEGEAEEIT 779
Query: 735 KILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTV---KVKSIDGFQ 791
I++ L A + IG+++PY QV +R+ + + G V +V S+DGFQ
Sbjct: 780 LIVRDLL-ARNSDLRCSDIGIITPYAGQVHRLRRMMLQSWRFPAGARVDQIEVSSVDGFQ 838
Query: 792 GGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGA 849
G E+++I+ S VR N +GF+S +R+NVALTRA+ L+++G+ TL GA
Sbjct: 839 GREKEVIVFSAVRSNKHSQLGFLSDRRRLNVALTRAKAALFVVGNALTLQGKTPASGA 896
Score = 43.1 bits (100), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 17/114 (14%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRT----LAC 312
LN +Q+ A+ L S LI GPPGTGK+ T+ + L LL++ + L C
Sbjct: 460 LNRTQIRAIAQSLS-------SRCALIQGPPGTGKSITI-IEALRLLKVHFQVPQPILVC 511
Query: 313 TPTNVAITELASRVLKLVKESYK-----RDSRSNTPICPLGDILLFGNKDRLKV 361
PT+VA+ +L +R +K + + S S P C L + ++L+V
Sbjct: 512 APTHVAVDQLLARAVKAGLRPLRVGLEDKVSPSAEPYCMLAQVARHPFAEKLEV 565
>gi|221505815|gb|EEE31460.1| regulator or nonsense transcripts RENT1, putative [Toxoplasma gondii
VEG]
Length = 1449
Score = 150 bits (379), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 139/263 (52%), Gaps = 27/263 (10%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E E IP+ L G VLIGD CQL +V SK + AG SLF RL +L
Sbjct: 788 VVIDEAAQATEPECLIPIVL-GAKQVVLIGDHCQLGPVVLSKKAAAAGLATSLFSRLLAL 846
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
H L +QYRMHP++S FP+ FY ++ +G + ++Y Q G + F
Sbjct: 847 GHRPLRLKVQYRMHPALSFFPSYFFYEGELQNGVTMTERTYFHQGP-----GDHRFPWPN 901
Query: 714 GGREDFIYHSCR------------NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTA 761
R F YHS N +E S + KI+ L K + + Q IGV++PY
Sbjct: 902 EERPMFFYHSTASEEISGSGTSYVNRIEASNIEKIVTFLLKCGLKASQ---IGVITPYDG 958
Query: 762 QVVAIRKKIGFEYENKDG----FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKP 817
Q I F+ + G ++V S+D FQG E+D I++S VR N+ IGF++
Sbjct: 959 QRAHISSL--FQRQTTLGQAAFADLEVASVDAFQGREKDFILLSCVRSNSNTGIGFLADS 1016
Query: 818 QRVNVALTRARHCLWILGSERTL 840
+R+NVA+TRA++ L I G+ L
Sbjct: 1017 RRLNVAMTRAKYGLIICGNATVL 1039
>gi|365989598|ref|XP_003671629.1| hypothetical protein NDAI_0H02120 [Naumovozyma dairenensis CBS 421]
gi|343770402|emb|CCD26386.1| hypothetical protein NDAI_0H02120 [Naumovozyma dairenensis CBS 421]
Length = 993
Score = 150 bits (379), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/272 (36%), Positives = 147/272 (54%), Gaps = 11/272 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
++IDE+ Q E E IP+ + G +L+GD QL P ++E K D AG +SLFERL S
Sbjct: 579 VLIDESTQATEPECLIPI-VKGAKQVILVGDHKQLGPVILERKAGD-AGLKQSLFERLIS 636
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L H L IQYRM+P +S FP+ FY + +G ++ ++ G
Sbjct: 637 LGHIPFRLEIQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVSDSTFPWPIHGVPMMFWA 696
Query: 713 IGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
GRE+ + S N +E +I+ KL+K V +Q IGV++PY Q I + +
Sbjct: 697 NYGREELSSNGTSYLNRIEAMNCERIITKLFKDGVKPEQ---IGVITPYEGQRAYILQYM 753
Query: 771 GFEYE-NKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
+KD + V+V S+D FQG E+D II+S VR N +IGF+ P+R+NV LTRA+
Sbjct: 754 QMNGAMDKDLYVKVEVASVDAFQGREKDYIILSCVRANDQQAIGFLRDPRRLNVGLTRAK 813
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCF 860
+ L ILG+ +L S +W L+ + + C
Sbjct: 814 YGLVILGNPMSL-SRNLLWNHLLIHFREKGCL 844
Score = 57.4 bits (137), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 15/117 (12%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRT 309
P F+ LNESQ A+ L+R + LI GPPGTGKT T + ++ L +I K +
Sbjct: 414 PHFTQ-LNESQSKAVQHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLTKIHKDKV 465
Query: 310 LACTPTNVAITELASRV----LKLVKESYK--RDSRSNTPICPLGDILLFGNKDRLK 360
L C P+NVA+ LA+++ LK+V+ + K D S+ L +++ G+K L+
Sbjct: 466 LVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLVARGSKGELR 522
>gi|358388726|gb|EHK26319.1| hypothetical protein TRIVIDRAFT_218486 [Trichoderma virens Gv29-8]
Length = 1083
Score = 150 bits (378), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 151/277 (54%), Gaps = 21/277 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG RSLFERL +L
Sbjct: 610 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNRSLFERLINL 668
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFG------TY 707
+ L QYRMHP +S FP+ FY + +G ++E++ +F
Sbjct: 669 KINPIPLKTQYRMHPCLSEFPSNMFYDGTLQNGI-----THEQRVRKDVDFPWPVTEMPM 723
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---V 763
F + IG E S N E S V K + + +KA V + IGV++PY Q +
Sbjct: 724 MFWSNIGHEEISTSGTSYLNRTEASNVEKTVTRFFKAGVKPSE---IGVITPYEGQRSYI 780
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
V+ + G Y+ + V+V S+D FQG E+D I++S VR N IGF+S P+R+NVA
Sbjct: 781 VSTMQNSG-TYKKELYKDVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVA 839
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
LTRA++ L ILG+ + L S +W L+ K R+CF
Sbjct: 840 LTRAKYGLVILGNPKVL-SKHELWHNLLAHFKDRKCF 875
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 12/84 (14%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPT 315
LN+ QV A+ A L++ + LI GPPGTGKT T + ++ L ++ + L C P+
Sbjct: 448 LNQGQVDAIRAVLQKP-------LSLIQGPPGTGKTVTSATIIYHLAKMSGSQVLVCAPS 500
Query: 316 NVAITELASRV----LKLVKESYK 335
NVA+ +L RV LK+V+ + K
Sbjct: 501 NVAVDQLCERVHRTGLKVVRLTAK 524
>gi|414886782|tpg|DAA62796.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1273
Score = 150 bits (378), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 147/281 (52%), Gaps = 29/281 (10%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G+ VL+GD CQL ++ K + AG +SLFERL L
Sbjct: 671 VLIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVIL 729
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF-----GTYS 708
L +QYRMHP +S FP+ FY + +G V + + +G +F
Sbjct: 730 GVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNER-----HSSGIDFPWPVPNRPM 784
Query: 709 FINIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
F + G+E+ N E + V KI+ ++ V Q IGV++PY Q I
Sbjct: 785 FFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ---IGVITPYEGQRAYI 841
Query: 767 RKKIGFEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQR 819
Y +++G ++V S+D FQG E+D II+S VR N IGF++ P+R
Sbjct: 842 -----VNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 896
Query: 820 VNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
+NVALTRAR+ + ILG+ + L S + +W +L+ K +C
Sbjct: 897 LNVALTRARYGIVILGNPKVL-SKQPLWNSLLTHYKEHECL 936
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 12/102 (11%)
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-K 306
+FG LN SQV A+ + L++ V LI GPPGTGKT T ++ + + +
Sbjct: 498 RFGAPGLPELNASQVLAVKSVLQKP-------VSLIQGPPGTGKTVTSGAIVYHMAKQGQ 550
Query: 307 CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ L C P+NVA+ +LA ++ LK+V+ K ++P+
Sbjct: 551 GQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPV 592
>gi|414886783|tpg|DAA62797.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1272
Score = 150 bits (378), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 147/281 (52%), Gaps = 29/281 (10%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G+ VL+GD CQL ++ K + AG +SLFERL L
Sbjct: 671 VLIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVIL 729
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF-----GTYS 708
L +QYRMHP +S FP+ FY + +G V + + +G +F
Sbjct: 730 GVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNER-----HSSGIDFPWPVPNRPM 784
Query: 709 FINIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
F + G+E+ N E + V KI+ ++ V Q IGV++PY Q I
Sbjct: 785 FFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ---IGVITPYEGQRAYI 841
Query: 767 RKKIGFEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQR 819
Y +++G ++V S+D FQG E+D II+S VR N IGF++ P+R
Sbjct: 842 -----VNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 896
Query: 820 VNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
+NVALTRAR+ + ILG+ + L S + +W +L+ K +C
Sbjct: 897 LNVALTRARYGIVILGNPKVL-SKQPLWNSLLTHYKEHECL 936
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 12/102 (11%)
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-K 306
+FG LN SQV A+ + L++ V LI GPPGTGKT T ++ + + +
Sbjct: 498 RFGAPGLPELNASQVLAVKSVLQKP-------VSLIQGPPGTGKTVTSGAIVYHMAKQGQ 550
Query: 307 CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ L C P+NVA+ +LA ++ LK+V+ K ++P+
Sbjct: 551 GQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPV 592
>gi|327200469|pdb|2XZL|A Chain A, Upf1-Rna Complex
Length = 802
Score = 150 bits (378), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
++IDE+ Q E E IP+ + G +L+GD QL P ++E K +D AG +SLFERL S
Sbjct: 521 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAAD-AGLKQSLFERLIS 578
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L H L +QYRM+P +S FP+ FY + +G ++ ++ G
Sbjct: 579 LGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWA 638
Query: 713 IGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
GRE+ + S N +E +I+ KL++ V +Q IGV++PY Q I + +
Sbjct: 639 NYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQ---IGVITPYEGQRAYILQYM 695
Query: 771 GFEYE-NKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
+KD + V+V S+D FQG E+D II+S VR N +IGF+ P+R+NV LTRA+
Sbjct: 696 QMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 755
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCF 860
+ L ILG+ R+L + ++W L+ + + C
Sbjct: 756 YGLVILGNPRSL-ARNTLWNHLLIHFREKGCL 786
Score = 54.7 bits (130), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 15/117 (12%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRT 309
P+F+ LN SQ A+ L+R + LI GPPGTGKT T + ++ L +I K R
Sbjct: 356 PNFAQ-LNSSQSNAVSHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRI 407
Query: 310 LACTPTNVAITELASRV----LKLVKESYK--RDSRSNTPICPLGDILLFGNKDRLK 360
L C P+NVA+ LA+++ LK+V+ + K D S+ L +++ G K LK
Sbjct: 408 LVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLVGRGAKGELK 464
>gi|189234959|ref|XP_973320.2| PREDICTED: similar to nonsense-mediated mrna decay protein 1
(rent1) [Tribolium castaneum]
Length = 1090
Score = 150 bits (378), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 143/262 (54%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G+ +L+GD CQL +V K + AG +SLFERL L
Sbjct: 604 ILIDESMQATEPECMVPVVL-GVKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 662
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + K F ++
Sbjct: 663 GIRPFRLEVQYRMHPELSRFPSNFFYEGSLQNGVCADERKLNKIDFPWPVIDRPMFFHVT 722
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI + ++ V +Q IGV++PY Q + + +
Sbjct: 723 QGQEEIAGSGTSYLNRTEAANVEKIATRFLRSGVKPEQ---IGVITPYEGQRAYLVQYMQ 779
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ +K +++ S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA++
Sbjct: 780 YQGSLHSKTYQEIEIASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKY 839
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 840 GIIIVGNPKVL-SKQPLWNHLL 860
Score = 47.8 bits (112), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPT 315
LN SQV A+ L+R + LI GPPGTGKT T + ++ L++ L C P+
Sbjct: 442 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 494
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ K ++P+
Sbjct: 495 NTAVDQLTEKIHKTNLKVVRLCAKSREAIDSPV 527
>gi|195588629|ref|XP_002084060.1| GD13018 [Drosophila simulans]
gi|194196069|gb|EDX09645.1| GD13018 [Drosophila simulans]
Length = 1408
Score = 150 bits (378), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 124/380 (32%), Positives = 192/380 (50%), Gaps = 53/380 (13%)
Query: 526 YLLQ-LHQRRSECLSVLRNLWNSLDELNLPCTT-SKLVLEDFCFKRASLFFSTASSSYKL 583
YLLQ LHQ+ + L ++ N +L+ P T + + C RA++ +T SS KL
Sbjct: 1058 YLLQQLHQKEKK-LQLISN------QLSPPLTQREEFEISQMCVTRANIICTTLSSCVKL 1110
Query: 584 HSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFG 643
+ + + ++DEA Q E + +P++ G+ H VL+GD QLPA+V SK + + G
Sbjct: 1111 ANY-VDFFDICIVDEATQCTEPWTLLPMRF-GLTHMVLVGDMQQLPAVVLSKKAIDFGLS 1168
Query: 644 RSLFERLT-------------SLNHSKHL-LNIQYRMHPSISLFPNLQFYRNQILDGANV 689
S+F+R+ L H+K L++QYRMHP I +PN FY +Q+++
Sbjct: 1169 NSMFDRIQRSLQTQLDKPGSYQLTHTKLFKLSMQYRMHPEICRWPNKYFYEDQLINA--- 1225
Query: 690 KSKSYEKQYLTGTEFGTYSFINIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGS 747
E + F Y IN+ R+ S N E + V K+L ++ K
Sbjct: 1226 -----ESTARFASPFIPYCVINLKYTRDSNGAQNKSISNNEEAAFVAKLLTEMDKHM--P 1278
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT 807
++ S G++SPY Q A+ + I + +++D +QG E+D+IIIS R T
Sbjct: 1279 SKRFSYGIISPYQNQCYALSQVI------PSHMNITPQTVDSYQGLEKDVIIISNAR--T 1330
Query: 808 GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADE-- 865
G GF++ QR+NVALTR R CL I G+ L S E +W L+ DA+ R+ +FN D
Sbjct: 1331 RG-CGFLTNYQRLNVALTRPRRCLVICGNFEDLKSVE-MWRNLLDDARKRKVYFNLDRDN 1388
Query: 866 ----ERNLAKARLEVSKELV 881
ER+L K + S L+
Sbjct: 1389 VNDLERSLIKKMMVNSINLI 1408
>gi|145353141|ref|XP_001420883.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581119|gb|ABO99176.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 388
Score = 150 bits (378), Expect = 8e-33, Method: Composition-based stats.
Identities = 95/274 (34%), Positives = 148/274 (54%), Gaps = 20/274 (7%)
Query: 591 LNF--LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
+NF +++DEA+Q+ E + +PL G VL+GD QLP V S+ ++ AG SLF+
Sbjct: 72 INFSAVMLDEASQVTEPMALVPLA-NGCQQLVLVGDHKQLPPTVVSREAELAGMTLSLFD 130
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYS 708
RL +LL+ Q+RMHP+IS FP+L FY+ + G + K + +
Sbjct: 131 RLIRAGVKPYLLDTQFRMHPAISYFPSLSFYKGLVKSGTPAAERPAPKGFAWPIPSVPIA 190
Query: 709 FI----NIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVV 764
F + + ++ Y N VE V+KIL L +A ++ +IG+V+PY +QV
Sbjct: 191 FCPSPQDAMETNDNMSY---SNKVEAERVMKILTDLLQA--KELRECNIGIVTPYASQVR 245
Query: 765 AIRK-------KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKP 817
IR + G + E + V+V S+DG+QG E++++I+STVR N +IGF++
Sbjct: 246 LIRSMLRARGVRTGVDRETGEA-GVEVSSVDGYQGREKELMIVSTVRANNLNTIGFVADA 304
Query: 818 QRVNVALTRARHCLWILGSERTLISSESIWGALV 851
+R NV LTRAR + ++G TL WG V
Sbjct: 305 RRCNVTLTRARRGVIVVGHASTLSRDRRTWGPWV 338
>gi|297794533|ref|XP_002865151.1| low-level beta-amylase 1 [Arabidopsis lyrata subsp. lyrata]
gi|297310986|gb|EFH41410.1| low-level beta-amylase 1 [Arabidopsis lyrata subsp. lyrata]
Length = 1253
Score = 150 bits (378), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 147/281 (52%), Gaps = 29/281 (10%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G+ VL+GD CQL ++ K + AG +SLFERL L
Sbjct: 653 VLIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 711
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF-----GTYS 708
L +QYRMHP++S FP+ FY + +G + E+Q TG +F
Sbjct: 712 GIKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTI----IERQ-TTGIDFPWPVPNRPM 766
Query: 709 FINIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
F + G+E+ N E + V K++ K+ V Q IGV++PY Q I
Sbjct: 767 FFYVQLGQEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPSQ---IGVITPYEGQRAYI 823
Query: 767 RKKIGFEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQR 819
Y ++G ++V S+D FQG E+D II+S VR N IGF++ P+R
Sbjct: 824 -----VNYMARNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 878
Query: 820 VNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
+NVALTRAR+ + ILG+ + L S + +W L+ K +C
Sbjct: 879 LNVALTRARYGIVILGNPKVL-SKQPLWNGLLTHYKEHECL 918
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 12/102 (11%)
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-K 306
+FG LN SQV A+ + L++ + LI GPPGTGKT T + ++ + + +
Sbjct: 480 RFGVPGLPELNASQVNAVKSVLQKP-------ISLIQGPPGTGKTVTSAAIVYHMAKQGQ 532
Query: 307 CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ L C P+NVA+ +LA ++ LK+V+ K ++P+
Sbjct: 533 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 574
>gi|403412933|emb|CCL99633.1| predicted protein [Fibroporia radiculosa]
Length = 1074
Score = 150 bits (378), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 104/289 (35%), Positives = 147/289 (50%), Gaps = 10/289 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E E IPL L G VL+GD QL ++ +K + AG +SLFERL L
Sbjct: 603 VLIDEATQAAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAARAGLTQSLFERLVVL 661
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
+ L +QYRMHP +S FP+ FY + +G + + T F
Sbjct: 662 GNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVPDTPMFFYQN 721
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E S V KI+ K +K+ V Q IGVV+PY Q I +
Sbjct: 722 LGQEEISSSGTSFLNRTEASNVEKIVTKFFKSGVVPSQ---IGVVTPYEGQRSYIVNYMQ 778
Query: 772 FEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K ++V S+D FQG E+D II+S VR N IGF++ P+R+NVALTRA++
Sbjct: 779 FNGSLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKY 838
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
+ ILG+ + L S +W L+ K + C NL + ++ SK
Sbjct: 839 GVVILGNPKVL-SKHPLWHYLLTHYKEKNCLVEGPLS-NLQPSMIQFSK 885
Score = 47.0 bits (110), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 12/84 (14%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACTPT 315
LN SQ+ A+ + L++ + LI GPPGTGKT T + + L ++ + L C P+
Sbjct: 441 LNHSQMYAVKSVLQK-------PISLIQGPPGTGKTVTSASTVYHLAKMNPGQVLVCAPS 493
Query: 316 NVAITELASRV----LKLVKESYK 335
NVA+ +L ++ LK+V+ + K
Sbjct: 494 NVAVDQLTEKIHATGLKVVRLTAK 517
>gi|32490215|emb|CAE05958.1| OSJNBb0088C09.17 [Oryza sativa Japonica Group]
gi|116309413|emb|CAH66489.1| OSIGBa0076I14.10 [Oryza sativa Indica Group]
Length = 770
Score = 150 bits (378), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 148/294 (50%), Gaps = 25/294 (8%)
Query: 570 ASLFFSTAS-SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 628
A++ FST S S + S + + ++IDEAAQ +GD QL
Sbjct: 427 AAIVFSTLSFSGSSIFSRMARAFDVVIIDEAAQA-------------------VGDPVQL 467
Query: 629 PAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
PA V S + + G+G SLF+R + +L IQYRMHP IS+FP+ +FY + DG
Sbjct: 468 PATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEG 527
Query: 689 VKSKSYEKQYLTGTEFGTYSFINIIGGR-EDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
+ K Y + FG + F ++ G + S N EV + + ++ +
Sbjct: 528 LSKKRPWHSY---SCFGPFCFFDVDGTESQPSGSGSWVNEDEVEFITLLYHQMAMRYPEL 584
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT 807
K + V+SPY QV ++ + ++ + V ++DGFQG E++++I S VRCN
Sbjct: 585 KSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNK 644
Query: 808 GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFF 861
IGF+S +R+NVA+TRAR + ++GS TL + W LV AK R +F
Sbjct: 645 EQKIGFVSDFRRMNVAITRARSAVLVVGSASTL-KEDKHWNNLVESAKERGRYF 697
>gi|195325897|ref|XP_002029667.1| GM24969 [Drosophila sechellia]
gi|194118610|gb|EDW40653.1| GM24969 [Drosophila sechellia]
Length = 1405
Score = 150 bits (378), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 126/380 (33%), Positives = 191/380 (50%), Gaps = 53/380 (13%)
Query: 526 YLLQ-LHQRRSECLSVLRNLWNSLDELNLPCTT-SKLVLEDFCFKRASLFFSTASSSYKL 583
YLLQ LHQ+ + L ++ N +L+ P T + + C RA++ +T SS KL
Sbjct: 1055 YLLQKLHQKEKK-LQLISN------QLSPPLTQREEFEISQMCVTRANIICTTLSSCVKL 1107
Query: 584 HSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFG 643
+ I + ++DEA Q E + +P++ G+ H VL+GD QLPA+V SK + + G
Sbjct: 1108 ANY-IDFFDICIVDEATQCTEPWTLLPMRF-GLTHMVLVGDMQQLPAVVLSKKAIDFGLS 1165
Query: 644 RSLFERLT-------------SLNHSKHL-LNIQYRMHPSISLFPNLQFYRNQILDGANV 689
SLF+R+ L H+K L++QYRMHP I +PN FY +Q+++
Sbjct: 1166 NSLFDRIQRSLQTQLDKPGSYQLTHTKLFKLSMQYRMHPEICQWPNKYFYEDQLINA--- 1222
Query: 690 KSKSYEKQYLTGTEFGTYSFINIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGS 747
E + F Y IN+ R+ S N E V K+L ++ K
Sbjct: 1223 -----ECTARFASPFIPYCVINLKYTRDSNGAQNKSISNNEEAGFVAKLLTEMDKHM--P 1275
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT 807
++ S G++SPY Q A+ + I + +++D +QG E+D+IIIS R T
Sbjct: 1276 SKRFSYGIISPYQNQCYALSQVI------PSHMNITPQTVDSYQGLEKDVIIISNAR--T 1327
Query: 808 GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADE-- 865
G GF++ QR+NVALTR R CL I G+ L S E +W L+ DA+ R+ +FN D
Sbjct: 1328 RGC-GFLTNYQRLNVALTRPRRCLVICGNFEDLKSVE-MWRNLLDDARKRKVYFNLDRDD 1385
Query: 866 ----ERNLAKARLEVSKELV 881
ER+L K + S L+
Sbjct: 1386 VNDLERSLIKKMMVNSINLI 1405
>gi|255575790|ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
gi|223531797|gb|EEF33616.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
Length = 1280
Score = 150 bits (378), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 148/281 (52%), Gaps = 29/281 (10%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G +L+GD CQL ++ K + AG +SLFERL L
Sbjct: 660 VLIDESTQATEPECLIPLVL-GAKQVILVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 718
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF-----GTYS 708
L +QYRMHPS+S FP+ FY + +G V E+Q +G +F
Sbjct: 719 GVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTVN----ERQS-SGIDFPWPVPNRPM 773
Query: 709 FINIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
F + G+E+ N E + V KI+ ++ V Q IGV++PY Q I
Sbjct: 774 FFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ---IGVITPYEGQRAYI 830
Query: 767 RKKIGFEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQR 819
Y +++G ++V S+D FQG E+D II+S VR N IGF++ P+R
Sbjct: 831 -----VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 885
Query: 820 VNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
+NVALTRAR+ + ILG+ + L S + +W +L+ K +C
Sbjct: 886 LNVALTRARYGIVILGNPKVL-SKQPLWNSLLTHYKEHECL 925
Score = 54.3 bits (129), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 12/102 (11%)
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-K 306
+FG LN SQV A+ + L+R + LI GPPGTGKT T + ++ + + +
Sbjct: 487 RFGAPGLPELNASQVFAVKSVLQRP-------ISLIQGPPGTGKTVTSAAIVYHMAKQGQ 539
Query: 307 CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ L C P+NVA+ +LA ++ LK+V+ K ++P+
Sbjct: 540 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 581
>gi|320580629|gb|EFW94851.1| ATP-dependent helicase NAM7 [Ogataea parapolymorpha DL-1]
Length = 909
Score = 150 bits (378), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 158/314 (50%), Gaps = 12/314 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IP+ + G N +L+GD QL ++ S+ + +AG +SLFERL L
Sbjct: 528 VLIDESTQASEPECLIPI-VKGANQVILVGDHQQLGPVILSRKAGDAGLRQSLFERLIYL 586
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
H L +QYRMHP +S F + FY + +G +S+S +
Sbjct: 587 GHMPIRLEVQYRMHPCLSEFSSNVFYDGSLQNGVTAESRSRPDSTFPWPIREIPMMFWAV 646
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI- 770
GRE+ S N E KI+ +L K V + IGV++PY Q I + +
Sbjct: 647 FGREELSASGTSYLNRTEAMNCEKIITRLLKEGVDPGK---IGVITPYAGQATFIVQYME 703
Query: 771 --GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
G + V+V S+D FQG E+D II+S VR N IGF+S P+R+NVALTRAR
Sbjct: 704 MNGLIADKSRYSEVEVASVDSFQGREKDYIILSCVRANDNQLIGFLSDPRRLNVALTRAR 763
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAE-S 887
+ ILG+ +TL S +W L+ + + C + E NL + +S+ E
Sbjct: 764 FGMAILGNPKTL-SKNPMWNRLLMHFREKGCLVDGSLE-NLKLCNIPLSRGGQATNGEFG 821
Query: 888 LTSTSQGGKKEEFE 901
L ++ G+ + ++
Sbjct: 822 LAPSTATGRSQSYD 835
Score = 50.4 bits (119), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 16/91 (17%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRT 309
P+F+ LN SQ A+ L + + LI GPPGTGKT T + ++ L ++ K +
Sbjct: 362 PNFAK-LNASQENAIHNVLSK-------PLSLIQGPPGTGKTVTSATIVYQLTKLHKGQI 413
Query: 310 LACTPTNVAITELAS-------RVLKLVKES 333
L C P+N+A+ LAS RVL+L+ +S
Sbjct: 414 LVCAPSNIAVDHLASKLEQLGLRVLRLIAKS 444
>gi|270001378|gb|EEZ97825.1| hypothetical protein TcasGA2_TC000192 [Tribolium castaneum]
Length = 1095
Score = 150 bits (378), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 143/262 (54%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G+ +L+GD CQL +V K + AG +SLFERL L
Sbjct: 609 ILIDESMQATEPECMVPVVL-GVKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 667
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + K F ++
Sbjct: 668 GIRPFRLEVQYRMHPELSRFPSNFFYEGSLQNGVCADERKLNKIDFPWPVIDRPMFFHVT 727
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI + ++ V +Q IGV++PY Q + + +
Sbjct: 728 QGQEEIAGSGTSYLNRTEAANVEKIATRFLRSGVKPEQ---IGVITPYEGQRAYLVQYMQ 784
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ +K +++ S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA++
Sbjct: 785 YQGSLHSKTYQEIEIASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKY 844
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 845 GIIIVGNPKVL-SKQPLWNHLL 865
Score = 47.8 bits (112), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPT 315
LN SQV A+ L+R + LI GPPGTGKT T + ++ L++ L C P+
Sbjct: 447 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 499
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ K ++P+
Sbjct: 500 NTAVDQLTEKIHKTNLKVVRLCAKSREAIDSPV 532
>gi|19577367|emb|CAD28448.1| possible regulator of nonsense transcripts [Aspergillus fumigatus]
Length = 1060
Score = 150 bits (378), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 148/273 (54%), Gaps = 13/273 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 569 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 627
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
S LN+QYRMHP +S FP+ FY + +G + + + + F +
Sbjct: 628 GCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVSAFDRLRRDVDFPWPVVDSPMMFWSN 687
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ----VVAIR 767
+G E S N E + V KI+ + +KA V Q IG+++PY Q V +++
Sbjct: 688 LGNEEISASGTSYLNRTEATNVEKIVTRFFKAGV---QPADIGIITPYEGQRSYIVSSMQ 744
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
F+ E+ ++V S+D FQG E+D II+S VR N IGF+S P+R+NVALTRA
Sbjct: 745 ANGTFKKEHYK--EIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 802
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCF 860
++ L ILG+ + L S +W L+ K R C
Sbjct: 803 KYGLVILGNPKVL-SKHPLWNCLLQHFKERHCL 834
Score = 58.2 bits (139), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q +KF LN SQ+ A+ + L+R + LI GPPGTGKT T
Sbjct: 385 EVAAAPMKTQLPKKFSVPGLPELNGSQINAVKSVLQRP-------MSLIQGPPGTGKTVT 437
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L +I + L C P+NVA+ +L R+ LK V+ + K +P+
Sbjct: 438 SATIIYHLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPV 492
>gi|57834047|emb|CAE05419.2| OSJNBa0035I04.7 [Oryza sativa Japonica Group]
Length = 744
Score = 150 bits (378), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 148/294 (50%), Gaps = 25/294 (8%)
Query: 570 ASLFFSTAS-SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 628
A++ FST S S + S + + ++IDEAAQ +GD QL
Sbjct: 401 AAIVFSTLSFSGSSIFSRMARAFDVVIIDEAAQA-------------------VGDPVQL 441
Query: 629 PAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
PA V S + + G+G SLF+R + +L IQYRMHP IS+FP+ +FY + DG
Sbjct: 442 PATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEG 501
Query: 689 VKSKSYEKQYLTGTEFGTYSFINIIGGR-EDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
+ K Y + FG + F ++ G + S N EV + + ++ +
Sbjct: 502 LSKKRPWHSY---SCFGPFCFFDVDGTESQPSGSGSWVNEDEVEFITLLYHQMAMRYPEL 558
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT 807
K + V+SPY QV ++ + ++ + V ++DGFQG E++++I S VRCN
Sbjct: 559 KSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNK 618
Query: 808 GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFF 861
IGF+S +R+NVA+TRAR + ++GS TL + W LV AK R +F
Sbjct: 619 EQKIGFVSDFRRMNVAITRARSAVLVVGSASTL-KEDKHWNNLVESAKERGRYF 671
>gi|403367834|gb|EJY83741.1| Splicing endonuclease positive effector sen1, putative [Oxytricha
trifallax]
Length = 1199
Score = 150 bits (378), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 149/285 (52%), Gaps = 31/285 (10%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
+ FL+IDEA Q E + IP +L G +L+GD+ QLPA S S+ + RS FERL
Sbjct: 761 VEFLIIDEACQCIEPSTLIPFEL-GPARVILVGDQNQLPATTFSDNSERTKYSRSFFERL 819
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLT-GTEFGTYSF 709
+ +++L IQYRMHP I +P+ FY N+I D + ++ + T F F
Sbjct: 820 LDNGYQRYMLQIQYRMHPVIRQYPSQTFYENRITDDKTISTREIPPVIESIKTYFTPSVF 879
Query: 710 INIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQ------------KVSIGVVS 757
++I +E S N E + ++Q L + SK K IG+++
Sbjct: 880 FDLINSQETLAETSKSNNEEAQFTLNLIQLLKEISNQSKSAAQQKSNSFDFLKNKIGIIT 939
Query: 758 PYTAQVVAIR-------KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG-- 808
PY +QV ++ + IG ++ +++ ++D +QG E+DIII + VR N+
Sbjct: 940 PYKSQVKILKDQIAPWLRSIGSRLQD-----IEINTVDAYQGREKDIIIFNCVRSNSSNQ 994
Query: 809 --GSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
S+GF+ +R+NVA+TRA+H L+++G+ TL + + W LV
Sbjct: 995 LKNSLGFLVDKRRMNVAITRAKHFLFVVGNSNTL-NRDQTWKGLV 1038
Score = 56.2 bits (134), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 11/108 (10%)
Query: 226 TDSVVDERCELCSVQRKGQWD------EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSG 279
TD+++ + L +Q+ ++ ++F F N SQ A++ + +D
Sbjct: 483 TDTILMPKTALQLIQKSCEYHKNTIQMQQFVQQFGGKFNPSQREALVEVTKMVD----DQ 538
Query: 280 VELIWGPPGTGKTKTVSMLLLTLLRIKC-RTLACTPTNVAITELASRV 326
+ LI GPPGTGKT T++ ++ L+R + L C P+N A+ E+ +R+
Sbjct: 539 LLLIQGPPGTGKTHTITGIISMLIRSGVEKILVCAPSNAAVDEIITRI 586
>gi|189207819|ref|XP_001940243.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976336|gb|EDU42962.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1079
Score = 150 bits (378), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 104/273 (38%), Positives = 147/273 (53%), Gaps = 13/273 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + AG +SLFERL L
Sbjct: 602 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAATAGLNQSLFERLVIL 660
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
S L +QYRMHP +S FP+ FY + +G ++ + + + F +
Sbjct: 661 GCSPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTMQERIRRDVDFPWPVVDSPMMFWSN 720
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRK 768
+G E S N E V KI+ + +KA V Q IG+++PY Q VV+ +
Sbjct: 721 LGAEEISASGTSYLNRTEAQNVEKIVTRFFKAGV---QPGDIGIITPYEGQRSYVVSSMQ 777
Query: 769 KIG-FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
G F+ EN V+V S+D FQG E+D II+S VR N IGF+S P+R+NVALTRA
Sbjct: 778 ATGSFKKENYK--EVEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 835
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCF 860
++ L ILG+ + L S +W L+ K R C
Sbjct: 836 KYGLVILGNPKVL-SKHPLWHYLLLHFKERNCL 867
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q KF LN SQ+ A+ + L++ + LI GPPGTGKT T
Sbjct: 418 EVAAAPMKIQIPRKFSVPGLPELNASQINAVKSVLQKP-------LSLIQGPPGTGKTVT 470
Query: 295 VSMLLLTLLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L +I + + L C P+NVA+ +L R+ LK V+ + K +P+
Sbjct: 471 SATIIYHLCKISQSQVLVCAPSNVAVDQLCERIHLTGLKTVRVTAKSREDVESPV 525
>gi|297605680|ref|NP_001057481.2| Os06g0310200 [Oryza sativa Japonica Group]
gi|255676976|dbj|BAF19395.2| Os06g0310200 [Oryza sativa Japonica Group]
Length = 1029
Score = 150 bits (378), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 148/294 (50%), Gaps = 25/294 (8%)
Query: 570 ASLFFSTAS-SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 628
A++ FST S S + S + + ++IDEAAQ +GD QL
Sbjct: 498 AAIVFSTLSFSGSSIFSRMARAFDVVIIDEAAQA-------------------VGDPVQL 538
Query: 629 PAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
PA V S + + G+G SLF+R + +L IQYRMHP IS+FP+ +FY + DG
Sbjct: 539 PATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEG 598
Query: 689 VKSKSYEKQYLTGTEFGTYSFINIIGGR-EDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
+ K Y + FG + F ++ G + S N EV + + ++ +
Sbjct: 599 LSKKRPWHSY---SCFGPFCFFDVDGTESQPSGSGSWVNEDEVEFITLLYHQMAMRYPEL 655
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT 807
K + V+SPY QV ++ + ++ + V ++DGFQG E++++I S VRCN
Sbjct: 656 KSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNK 715
Query: 808 GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFF 861
IGF+S +R+NVA+TRAR + ++GS TL + W LV AK R +F
Sbjct: 716 EQKIGFVSDFRRMNVAITRARSAVLVVGSASTL-KEDKHWNNLVESAKERGRYF 768
>gi|356541331|ref|XP_003539131.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine
max]
Length = 1270
Score = 150 bits (378), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 141/276 (51%), Gaps = 19/276 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD CQL ++ K + AG +SLFERL L
Sbjct: 650 VLIDESTQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 708
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G V + F +
Sbjct: 709 GVKPIRLQVQYRMHPCLSEFPSNSFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQ 768
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E + V KI+ K+ V Q IGV++PY Q I
Sbjct: 769 MGQEEISASGTSYLNRTEAANVEKIVTTFLKSGVVPSQ---IGVITPYEGQRAYI----- 820
Query: 772 FEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
Y +++G ++V S+D FQG E+D II+S VR N IGF++ P+R+NVAL
Sbjct: 821 VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 880
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
TRAR+ + ILG+ + L S + +W +L+ K +C
Sbjct: 881 TRARYGIVILGNPKVL-SKQPLWNSLLTHYKEHECL 915
Score = 55.5 bits (132), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 12/102 (11%)
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-K 306
+FG LN SQV A+ + L+R + LI GPPGTGKT T + L+ + + +
Sbjct: 477 RFGAPGLPELNASQVFAVKSVLQRP-------ISLIQGPPGTGKTVTSAALVYHMAKQGQ 529
Query: 307 CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ L C P+NVA+ +LA ++ LK+V+ K ++P+
Sbjct: 530 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 571
>gi|115491919|ref|XP_001210587.1| ATP-dependent helicase NAM7 [Aspergillus terreus NIH2624]
gi|114197447|gb|EAU39147.1| ATP-dependent helicase NAM7 [Aspergillus terreus NIH2624]
Length = 1072
Score = 150 bits (378), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 150/273 (54%), Gaps = 13/273 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 581 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 639
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG-ANVKSKSYEKQYLTGTEFGTYSFINI 712
S LN+QYRMHP +S FP+ FY + +G ++++ + + F +
Sbjct: 640 GCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGISSIERLRRDVDFPWPIMDNPMMFWSN 699
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ----VVAIR 767
+G E S N E + V KI+ + +KA V Q IG+++PY Q V +++
Sbjct: 700 LGNEEISASGTSYLNRTEATNVEKIVTRFFKAGV---QPQDIGIITPYEGQRSYIVSSMQ 756
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
F+ E+ ++V S+D FQG E+D II+S VR N IGF+S P+R+NVALTRA
Sbjct: 757 ANGTFKKEHYK--EIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 814
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCF 860
++ L ILG+ + L S +W L+ K R C
Sbjct: 815 KYGLAILGNPKVL-SKHPLWNCLLQHFKERHCL 846
Score = 57.8 bits (138), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q +KF LN SQ+ A+ + L+R + LI GPPGTGKT T
Sbjct: 397 EVAAAPMKTQMPKKFSVPGLPELNGSQINAVKSVLQRP-------LSLIQGPPGTGKTVT 449
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L +I + L C P+NVA+ +L R+ LK V+ + K +P+
Sbjct: 450 SATIIYHLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPV 504
>gi|119495335|ref|XP_001264454.1| regulator of nonsense transcripts, putative [Neosartorya fischeri
NRRL 181]
gi|119412616|gb|EAW22557.1| regulator of nonsense transcripts, putative [Neosartorya fischeri
NRRL 181]
Length = 1079
Score = 150 bits (378), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 148/273 (54%), Gaps = 13/273 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 588 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 646
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
S LN+QYRMHP +S FP+ FY + +G + + + + F +
Sbjct: 647 GCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVSAFDRLRRDVDFPWPVVDSPMMFWSN 706
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ----VVAIR 767
+G E S N E + V KI+ + +KA V Q IG+++PY Q V +++
Sbjct: 707 LGNEEISASGTSYLNRTEATNVEKIVTRFFKAGV---QPADIGIITPYEGQRSYIVSSMQ 763
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
F+ E+ ++V S+D FQG E+D II+S VR N IGF+S P+R+NVALTRA
Sbjct: 764 ANGTFKKEHYK--EIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 821
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCF 860
++ L ILG+ + L S +W L+ K R C
Sbjct: 822 KYGLVILGNPKVL-SKHPLWNCLLQHFKERHCL 853
Score = 57.8 bits (138), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q +KF LN SQ+ A+ + L+R + LI GPPGTGKT T
Sbjct: 404 EVAAAPMKTQLPKKFSVPGLPELNGSQINAVKSVLQRP-------MSLIQGPPGTGKTVT 456
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L +I + L C P+NVA+ +L R+ LK V+ + K +P+
Sbjct: 457 SATIIYHLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPV 511
>gi|70995842|ref|XP_752676.1| regulator of nonsense transcripts [Aspergillus fumigatus Af293]
gi|42820708|emb|CAF32021.1| regulator of nonsense transcripts, putative [Aspergillus fumigatus]
gi|66850311|gb|EAL90638.1| regulator of nonsense transcripts, putative [Aspergillus fumigatus
Af293]
gi|159131430|gb|EDP56543.1| regulator of nonsense transcripts, putative [Aspergillus fumigatus
A1163]
Length = 1079
Score = 150 bits (378), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 148/273 (54%), Gaps = 13/273 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 588 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 646
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
S LN+QYRMHP +S FP+ FY + +G + + + + F +
Sbjct: 647 GCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVSAFDRLRRDVDFPWPVVDSPMMFWSN 706
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ----VVAIR 767
+G E S N E + V KI+ + +KA V Q IG+++PY Q V +++
Sbjct: 707 LGNEEISASGTSYLNRTEATNVEKIVTRFFKAGV---QPADIGIITPYEGQRSYIVSSMQ 763
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
F+ E+ ++V S+D FQG E+D II+S VR N IGF+S P+R+NVALTRA
Sbjct: 764 ANGTFKKEHYK--EIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 821
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCF 860
++ L ILG+ + L S +W L+ K R C
Sbjct: 822 KYGLVILGNPKVL-SKHPLWNCLLQHFKERHCL 853
Score = 57.8 bits (138), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q +KF LN SQ+ A+ + L+R + LI GPPGTGKT T
Sbjct: 404 EVAAAPMKTQLPKKFSVPGLPELNGSQINAVKSVLQRP-------MSLIQGPPGTGKTVT 456
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L +I + L C P+NVA+ +L R+ LK V+ + K +P+
Sbjct: 457 SATIIYHLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPV 511
>gi|393245688|gb|EJD53198.1| ATP dependent helicase [Auricularia delicata TFB-10046 SS5]
Length = 1072
Score = 150 bits (378), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 142/274 (51%), Gaps = 9/274 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E E IPL L G AVL+GD QL ++ +K + AG +SLFERL +
Sbjct: 599 VLIDEATQAAEPECMIPLVL-GCKQAVLVGDHQQLGPVIMNKKAARAGLTQSLFERLVLI 657
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
+ L +QYRMHP +S FP+ FY + +G + + T F
Sbjct: 658 GNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPAPDTPMFFYQN 717
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E + V KI+ K +K+ V Q IGV++PY Q I +
Sbjct: 718 LGQEEISSSGTSFLNRTEAANVEKIVTKFFKSGVVPSQ---IGVITPYEGQRSYIVNYMQ 774
Query: 772 FEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K ++V S+D FQG E+D II+S VR N IGF++ P+R+NVALTRA++
Sbjct: 775 FNGSLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKY 834
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
+ ILG+ + L S +W L+ K + C +
Sbjct: 835 GVVILGNPKVL-SKHPLWHYLLTHYKEKNCLVDG 867
Score = 46.6 bits (109), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 12/84 (14%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPT 315
LN SQ+ A+ + L++ + LI GPPGTGKT T + ++ L ++ + L C P+
Sbjct: 437 LNHSQMYAVKSVLQK-------PLSLIQGPPGTGKTVTSASIVYHLAKMNHGQVLVCAPS 489
Query: 316 NVAITELASRV----LKLVKESYK 335
NVA+ +L ++ LK+V+ + K
Sbjct: 490 NVAVDQLTEKIHATGLKVVRLTAK 513
>gi|357621770|gb|EHJ73491.1| putative nonsense-mediated mrna decay protein 1 [Danaus plexippus]
Length = 1037
Score = 150 bits (378), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 145/271 (53%), Gaps = 9/271 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 614 ILIDEGMQSTEPECMVPVVL-GARQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 672
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + + + K F +
Sbjct: 673 GIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRPDRPMFFYVT 732
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V K+ + KA V +Q IG+++PY Q + + +
Sbjct: 733 QGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVRPEQ---IGIITPYEGQRSYLVQHMQ 789
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ K ++V S+D FQG E+DIII+S VR N IGF+S P+R+NVALTRA++
Sbjct: 790 YQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRLNVALTRAKY 849
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCF 860
L ++G+ + L S + +W L+ K R+
Sbjct: 850 GLIVVGNPKVL-SKQPLWNHLLAFYKERRVL 879
Score = 47.4 bits (111), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 12/80 (15%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPT 315
LN SQV A+ L+R + LI GPPGTGKT T + ++ L+R L C P+
Sbjct: 451 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVRQNGGPVLVCAPS 503
Query: 316 NVAITELASRV----LKLVK 331
N A+ +L ++ LK+V+
Sbjct: 504 NTAVDQLTEKIHRTGLKVVR 523
>gi|384247387|gb|EIE20874.1| hypothetical protein COCSUDRAFT_48445 [Coccomyxa subellipsoidea
C-169]
Length = 863
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 157/315 (49%), Gaps = 47/315 (14%)
Query: 589 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
+P + +VIDEAAQ E + +PL + G + L+GD QLPA V S + E G+ +SLF+
Sbjct: 454 RPFDVVVIDEAAQAVEPSTLVPL-VTGCHQVYLVGDPVQLPATVISSRAVEHGYDKSLFK 512
Query: 649 RLTS-----------------LNHSK--------------------HLLNIQYRMHPSIS 671
RL S L+ S+ +L+ QYRMHP+IS
Sbjct: 513 RLQSSGFPVQASPQGSPTQNQLDESRPAPCNACYSMVSTTIPKLPCKMLDTQYRMHPAIS 572
Query: 672 LFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIV--- 728
FP+ +FY+ + DG ++ S + + FG + + G + + +I+
Sbjct: 573 AFPSAEFYQGSLRDGEGTEA-STTRAWHEHACFGPLALFQVAG--REMVEEGATSIINKQ 629
Query: 729 EVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSID 788
E V+ I ++L + + + ++SPY+AQV +R K + V V +ID
Sbjct: 630 EAEMVLCIYRELVSRYPHLRTSHQVAIISPYSAQVKLLRAKFVEALGAEGRHLVDVNTID 689
Query: 789 GFQGGEEDIIIISTVRCNT--GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESI 846
GFQG E+DI+I S VR +T G IGF++ +RVNVALTRAR L ++ + + L +
Sbjct: 690 GFQGREKDIVIFSAVRSSTQRKGKIGFVADERRVNVALTRARASLLVVANFKVL-ERDGH 748
Query: 847 WGALVCDAKARQCFF 861
W LV A A +C +
Sbjct: 749 WRNLVKHATANKCLY 763
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 131/323 (40%), Gaps = 43/323 (13%)
Query: 34 WSLED-IFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEE-TRMQLRSGLEAMRRAPYA 91
W L D + ++E +P+SF+S + Y F +LEE + L+ E + P+
Sbjct: 23 WELADRAGADGGVTKELEALPQSFESAEDYIFRFAPLVLEELGALILQGSDEGVMFQPHP 82
Query: 92 QVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKP---EKVSDLR 148
V+A + T+ + I ++++ ++ D ++L+ P + + L
Sbjct: 83 AVLAAYKQ----TDDFLIARLALPAGVASTFRD------NDAILLSKDDPNDEDAIGQLH 132
Query: 149 RVGRT------WTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKS-FFFIYLTNI 201
+G+ + + DD +V+A M+ T S +F + L N+
Sbjct: 133 ALGKVEGREGEQSLSVCFYLSDDSQAGNPAGMQRVRA---MRAGLSTANSCWFLLRLCNL 189
Query: 202 LPNKRIWNSLHMCGNWKVITQVLGTDSVV-DERCELCSVQRKGQWDEKFGPSFSSTLNES 260
R W +LH + +L + D + LC QR Q + + NES
Sbjct: 190 STLIREWTALHAFPSLSFKDVLLSAKPPLKDGKQALCIPQRVQQ-------AMEAEYNES 242
Query: 261 QVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAIT 320
Q+ A+ A L RS V LI GPPGTGKT+T+ L LL I +
Sbjct: 243 QMSAVTAGL------DRSPVVLIQGPPGTGKTRTI----LGLLSIILHAAPAHSAGLIKR 292
Query: 321 ELASRVLKLVKESYKRDSRSNTP 343
A+ + + V + +R RS P
Sbjct: 293 APAAPMPEYVTDDVRRLWRSAAP 315
>gi|308810357|ref|XP_003082487.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
gi|116060956|emb|CAL56344.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
Length = 1079
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 144/271 (53%), Gaps = 14/271 (5%)
Query: 591 LNF--LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
+NF +++DEA+Q+ E S +PL G VL+GD QLP V S+ ++ AG SLF+
Sbjct: 762 INFSAVMLDEASQVTEPMSLVPLA-NGCQQLVLVGDHKQLPPTVVSREAELAGMTLSLFD 820
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYS 708
RLT +LL+ Q+RMHP+IS FP+ FY + G K + K + +
Sbjct: 821 RLTRAGVKPYLLDTQFRMHPAISHFPSHSFYNGLVKSGTPAKDRPAPKGFQWPIPSVPIA 880
Query: 709 FINII-GGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F +E S N VE V++IL + A G + +G+V+PY AQV IR
Sbjct: 881 FCPTPENSKETNDNLSYSNRVEAERVLEILLGVLSA--GELRPCHVGIVTPYAAQVKLIR 938
Query: 768 K-------KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRV 820
+ G + + + ++V S+DG+QG E++++I+STVR N +IGF++ +R
Sbjct: 939 SMLRQRGVRTGVDRDTGEA-GIEVSSVDGYQGREKELMIVSTVRANDLNTIGFVADARRC 997
Query: 821 NVALTRARHCLWILGSERTLISSESIWGALV 851
NV LTRAR + ++G TL WG V
Sbjct: 998 NVTLTRARRGVIVVGHASTLSKDRRTWGPWV 1028
>gi|330918442|ref|XP_003298225.1| hypothetical protein PTT_08860 [Pyrenophora teres f. teres 0-1]
gi|311328707|gb|EFQ93678.1| hypothetical protein PTT_08860 [Pyrenophora teres f. teres 0-1]
Length = 1079
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/273 (38%), Positives = 147/273 (53%), Gaps = 13/273 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + AG +SLFERL L
Sbjct: 602 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAATAGLNQSLFERLVIL 660
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
S L +QYRMHP +S FP+ FY + +G ++ + + + F +
Sbjct: 661 GCSPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTMQERIRRDVDFPWPVVDSPMMFWSN 720
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRK 768
+G E S N E V KI+ + +KA V Q IG+++PY Q VV+ +
Sbjct: 721 LGAEEISASGTSYLNRTEAQNVEKIVTRFFKAGV---QPGDIGIITPYEGQRSYVVSSMQ 777
Query: 769 KIG-FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
G F+ EN V+V S+D FQG E+D II+S VR N IGF+S P+R+NVALTRA
Sbjct: 778 ATGSFKKENYK--EVEVASVDAFQGREKDFIILSCVRSNEHQGIGFLSDPRRLNVALTRA 835
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCF 860
++ L ILG+ + L S +W L+ K R C
Sbjct: 836 KYGLVILGNPKVL-SKHPLWHYLLLHFKERNCL 867
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q KF LN SQ+ A+ + L++ + LI GPPGTGKT T
Sbjct: 418 EVAAAPMKIQIPRKFSVPGLPELNASQINAVKSVLQKP-------LSLIQGPPGTGKTVT 470
Query: 295 VSMLLLTLLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L +I + + L C P+NVA+ +L R+ LK V+ + K +P+
Sbjct: 471 SATIIYHLCKISQSQVLVCAPSNVAVDQLCERIHLTGLKTVRVTAKSREDVESPV 525
>gi|224154694|ref|XP_002337504.1| predicted protein [Populus trichocarpa]
gi|222839484|gb|EEE77821.1| predicted protein [Populus trichocarpa]
Length = 395
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/140 (58%), Positives = 107/140 (76%), Gaps = 5/140 (3%)
Query: 1466 FLYNEKEMIEWISKSHKNV---NNYHSLVVLRLVVIICLLHLNFGKFGSSLRDLLGRKYV 1522
LYNEK+M+EWI S KNV N+YH++VVLRLVVIICL+++NFG L DLLGR Y+
Sbjct: 2 LLYNEKDMMEWIRVSEKNVKVLNDYHAVVVLRLVVIICLIYVNFGWCEGLLSDLLGRTYI 61
Query: 1523 SRLLPLEFCDALRKIENHNCLNVHE--ISQAFKKIGNPLVIASLGKNCSQFLCPDAIFVN 1580
++ LP +F DA+RK +NHN LNV+ +++AF KIGNPLV+ S GKNCS FLCPDAIFV+
Sbjct: 62 TKKLPSQFYDAIRKRQNHNSLNVNPTVVAEAFSKIGNPLVVVSFGKNCSGFLCPDAIFVD 121
Query: 1581 MKVMKSTDEIFGILYPKMEA 1600
MKV +S D + +L+ K +A
Sbjct: 122 MKVNESKDNVLRVLFAKTDA 141
>gi|322706853|gb|EFY98432.1| Regulator of nonsense transcripts 1 [Metarhizium anisopliae ARSEF
23]
Length = 1083
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/280 (37%), Positives = 147/280 (52%), Gaps = 27/280 (9%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 611 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLIKL 669
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFG------TY 707
+ L QYRMHP +S FP+ FY DG+ ++E++ EF
Sbjct: 670 QLAPIRLTTQYRMHPCLSEFPSNMFY-----DGSLQNGITHEQRLRRDVEFPWPIAETPM 724
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
F + +G E S N E S V K + + +KA V + IGV++PY Q
Sbjct: 725 MFWSNLGNEEISTSGTSYLNRTEASNVEKTVTRFFKAGVKPSE---IGVITPYEGQ---- 777
Query: 767 RKKIGFEYENKDGFT------VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRV 820
R I +N F V+V S+D FQG E+D I++S VR N IGF+S P+R+
Sbjct: 778 RSYIVTTMQNSGSFKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRRL 837
Query: 821 NVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
NVALTRA++ L ILG+ + L S +W L+ K R+CF
Sbjct: 838 NVALTRAKYGLVILGNPKVL-SKHELWHNLLVHFKDRKCF 876
Score = 51.2 bits (121), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 12/84 (14%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC-RTLACTPT 315
LN+SQ+ A+ + L++ + LI GPPGTGKT T + ++ L ++ + L C P+
Sbjct: 449 LNQSQIDAIKSVLQK-------PLSLIQGPPGTGKTVTSATIIYHLAKMSGNQVLVCAPS 501
Query: 316 NVAITELASRV----LKLVKESYK 335
NVA+ +L R+ LK+V+ + K
Sbjct: 502 NVAVDQLCERIHNTNLKVVRLTAK 525
>gi|320592037|gb|EFX04476.1| regulator of nonsense [Grosmannia clavigera kw1407]
Length = 1095
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 148/272 (54%), Gaps = 11/272 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 616 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKL 674
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGT-YSFINI 712
+ LN+QYRMHP ++ FP+ FY + +G ++ + + T F +
Sbjct: 675 GFAPIRLNVQYRMHPHLAAFPSNMFYEGSLQNGVTIQERLRKDVDFPWPVVDTPMMFWSN 734
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRK 768
+G E S N E S V K++ + +KA V + IGV++PY Q +V +
Sbjct: 735 LGNEEISASGTSYLNRTEASNVEKVVTRFFKAGV---KPADIGVITPYEGQRSYIVTTMQ 791
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
G ++ + V+V S+D FQG E+D I++S VR N IGF+S P+R+NVALTRA+
Sbjct: 792 NTG-TFKKESYKEVEVASVDAFQGREKDYIVLSCVRSNENQGIGFLSDPRRLNVALTRAK 850
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCF 860
+ + ILG+ + L E +W L+ K +C
Sbjct: 851 YGIVILGNPKVLAKHE-LWYHLLVHFKDHKCL 881
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 12/106 (11%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ K +KF LN SQ+ A+ A L + + LI GPPGTGKT T
Sbjct: 432 EVAVAPMKTSLPKKFTAPQLPELNGSQISAIKAVLS-------TPLSLIQGPPGTGKTVT 484
Query: 295 VSMLLLTLLRI-KCRTLACTPTNVAITELASRV----LKLVKESYK 335
+ ++ L ++ + L C P+NVA+ +L RV LK+V+ + K
Sbjct: 485 SATIIYHLAKMNNSQVLVCAPSNVAVDQLCERVHRTGLKVVRLTAK 530
>gi|358371937|dbj|GAA88543.1| regulator of nonsense transcripts [Aspergillus kawachii IFO 4308]
Length = 1072
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 150/277 (54%), Gaps = 21/277 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 581 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 639
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK-----QYLTGTEFGTYS 708
S LN+QYRMHP +S FP+ FY + +G + S+E+ +
Sbjct: 640 GCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGIS----SFERLRRDVDFPWPIADNPMM 695
Query: 709 FINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ----V 763
F + +G E S N E + V KI+ + +KA V Q IG+++PY Q V
Sbjct: 696 FWSNLGNEEISASGTSYLNRTEATNVEKIVTRFFKAGV---QPQDIGIITPYEGQRSYIV 752
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
+++ F+ E+ ++V S+D FQG E+D II+S VR N IGF+S P+R+NVA
Sbjct: 753 SSMQANGTFKKEHYK--EIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVA 810
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
LTRA++ L ILG+ + L S +W L+ K R C
Sbjct: 811 LTRAKYGLAILGNPKVL-SKHPLWNCLLQHFKERHCL 846
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q +KF LN SQ+ A+ + L+R + LI GPPGTGKT T
Sbjct: 397 EVAAAPMKTQMPKKFSVPGLPELNGSQINAVKSVLQRP-------LSLIQGPPGTGKTVT 449
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L +I + L C P+NVA+ +L R+ LK V+ + K +P+
Sbjct: 450 SATIIYHLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPV 504
>gi|108709046|gb|ABF96841.1| expressed protein [Oryza sativa Japonica Group]
Length = 770
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 148/294 (50%), Gaps = 25/294 (8%)
Query: 570 ASLFFSTAS-SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 628
A++ FST S S + S + + ++IDEAAQ +GD QL
Sbjct: 427 AAIVFSTLSFSGSSIFSRMARAFDVVIIDEAAQA-------------------VGDPVQL 467
Query: 629 PAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
PA V S + + G+G SLF+R + +L IQYRMHP IS+FP+ +FY + DG
Sbjct: 468 PATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEG 527
Query: 689 VKSKSYEKQYLTGTEFGTYSFINIIGGR-EDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
+ K Y + FG + F ++ G + S N EV + + ++ +
Sbjct: 528 LSKKRPWHSY---SCFGPFCFFDVDGTESQPSGSGSWVNEDEVEFITLLYHQMAMRYPEL 584
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT 807
K + V+SPY QV ++ + ++ + V ++DGFQG E++++I S VRCN
Sbjct: 585 KSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGCEKEVVIFSCVRCNK 644
Query: 808 GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFF 861
IGF+S +R+NVA+TRAR + ++GS TL + W LV AK R +F
Sbjct: 645 EQKIGFVSDFRRMNVAITRARSAVLVVGSASTL-KEDKHWNNLVESAKERGRYF 697
>gi|118366801|ref|XP_001016616.1| conserved hypothetical protein [Tetrahymena thermophila]
gi|89298383|gb|EAR96371.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
Length = 834
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 156/292 (53%), Gaps = 21/292 (7%)
Query: 577 ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKI 636
AS+++K +V VIDEAAQ E + IPLQ +LIGD QLPA + SK
Sbjct: 528 ASANFKFDTV--------VIDEAAQSTEISTLIPLQYQ-CTRLILIGDHNQLPATIFSKK 578
Query: 637 SDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK 696
++ + +SLFER H+LN QYRM+P IS F + FY+++I D + +
Sbjct: 579 CEKFNYHQSLFERFEKCKVEVHMLNQQYRMNPIISKFISQTFYQDKISDAEKINELVGQP 638
Query: 697 QYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
+ F F N + G E F S +N E A+++I KL + +G++
Sbjct: 639 EIYQLRLFQPVVFFN-VEGNEIFEKSSYKNEEESKAIVEIYNKLRTTFPNFDLN-KLGII 696
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC-------NTGG 809
+ Y+ QV I KKI ++ D V+V ++DGFQG E+DIII STVR NT
Sbjct: 697 TAYSRQVKEIEKKIK-AHDKTDKCMVEVHTVDGFQGREKDIIIFSTVRASQVNGEKNTKK 755
Query: 810 SIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV-CDAKARQCF 860
+IGF++ +R+NV+L+RAR C+ ++G + L S+ +W L + R C+
Sbjct: 756 TIGFLNDRRRMNVSLSRARLCVIVVGDLKQLKFSK-LWKGLAEYSIEQRSCY 806
Score = 43.9 bits (102), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 106/266 (39%), Gaps = 46/266 (17%)
Query: 52 IPESFQSVKQYFGSFVFPLLEETRMQL------------------RSGLEAMRRAPYAQV 93
IP SF + Y +F L E + Q+ +S + R +QV
Sbjct: 91 IPLSFNDPEDYVKTFEQHLFSEAKAQIIKAQVTEICFKINIKCLKKSRAPEIMRLKNSQV 150
Query: 94 IAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSD----LRR 149
IA + E+ + + T+ K D +V++ P KV L
Sbjct: 151 IALKN---------NSELFFRKLTMEKVADSETKYGTHDFIVISLQDPSKVISGEHMLGV 201
Query: 150 VGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWN 209
V R + V DE+ + N+ +K MQ + ++++ +I+ +R +
Sbjct: 202 VERAEGNEILVKVVFDENSSDPRNQKILKV---MQQDESVWRNWYVKKFCSIVTIQREYE 258
Query: 210 SLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACL 269
+LH + + +L + + ++ E S+ E+ + N SQ+ A+ + L
Sbjct: 259 ALHNFNDLLLKEFILNPEKLTQKKEEKFSI------PEQLSIRLNQIYNPSQIQAINSTL 312
Query: 270 RRLDCGHRSGVELIWGPPGTGKTKTV 295
++ GV LI GPPGTGKT+TV
Sbjct: 313 KK------QGVTLIQGPPGTGKTRTV 332
>gi|255713384|ref|XP_002552974.1| KLTH0D05786p [Lachancea thermotolerans]
gi|238934354|emb|CAR22536.1| KLTH0D05786p [Lachancea thermotolerans CBS 6340]
Length = 982
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/276 (34%), Positives = 149/276 (53%), Gaps = 19/276 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IP+ + G VL+GD QL ++ + + +AG +SLFERL SL
Sbjct: 575 VLIDESTQASEPECLIPI-VKGAKQVVLVGDHQQLGPVILDRKAADAGLKQSLFERLISL 633
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKS-------YEKQYLTGTEFGT 706
H L +QYRM+P +S FP+ FY + +G ++ +S + L +
Sbjct: 634 GHIPIRLEVQYRMNPHLSEFPSNMFYEGSLQNGVTIEQRSVTNSTFPWPIHDLPMMFWSN 693
Query: 707 YSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
Y I G ++ N +E +++ KL+K V Q IGV++PY Q I
Sbjct: 694 YGREEISGNGTSYL-----NRIEAMNCERVITKLFKDGVKPDQ---IGVITPYEGQRAYI 745
Query: 767 RK--KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
+ ++ + + V+V S+D FQG E+D II+S VR N +IGF+S P+R+NVAL
Sbjct: 746 VQYMQMNGSMDKELYMNVEVASVDAFQGREKDYIILSCVRANEQQAIGFLSDPRRLNVAL 805
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
TR+++ L ILG+ R+L S S+W L+ + + C
Sbjct: 806 TRSKYGLVILGNPRSL-SRNSLWSHLLVYFREKGCL 840
Score = 53.9 bits (128), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 12/107 (11%)
Query: 247 EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI- 305
E+F + LN SQ A+ L+R + LI GPPGTGKT T + ++ L ++
Sbjct: 405 EQFSIPHFTQLNVSQANAIRHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKLH 457
Query: 306 KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPICPLG 348
K R L C P+NVA+ LA+++ LK+V+ + K + + LG
Sbjct: 458 KERILVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLG 504
>gi|145240145|ref|XP_001392719.1| regulator of nonsense transcripts 1 [Aspergillus niger CBS 513.88]
gi|134077233|emb|CAK45574.1| unnamed protein product [Aspergillus niger]
Length = 1072
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 150/277 (54%), Gaps = 21/277 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 581 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 639
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK-----QYLTGTEFGTYS 708
S LN+QYRMHP +S FP+ FY + +G + S+E+ +
Sbjct: 640 GCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGIS----SFERLRRDVDFPWPIADNPMM 695
Query: 709 FINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ----V 763
F + +G E S N E + V KI+ + +KA V Q IG+++PY Q V
Sbjct: 696 FWSNLGNEEISASGTSYLNRTEATNVEKIVTRFFKAGV---QPQDIGIITPYEGQRSYIV 752
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
+++ F+ E+ ++V S+D FQG E+D II+S VR N IGF+S P+R+NVA
Sbjct: 753 SSMQANGTFKKEHYK--EIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVA 810
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
LTRA++ L ILG+ + L S +W L+ K R C
Sbjct: 811 LTRAKYGLAILGNPKVL-SKHPLWNCLLQHFKERHCL 846
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q +KF LN SQ+ A+ + L+R + LI GPPGTGKT T
Sbjct: 397 EVAAAPMKTQMPKKFSVPGLPELNGSQINAVKSVLQRP-------LSLIQGPPGTGKTVT 449
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L +I + L C P+NVA+ +L R+ LK V+ + K +P+
Sbjct: 450 SATIIYHLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPV 504
>gi|412986744|emb|CCO15170.1| ATP-dependent helicase NAM7 [Bathycoccus prasinos]
Length = 974
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 143/274 (52%), Gaps = 27/274 (9%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DEA+Q+ E S +P+ G VL+GD QLP + S+ ++ G S+F+RL SL
Sbjct: 674 VMLDEASQVTEPMSLVPIS-RGCQQLVLVGDHKQLPPTILSREAELGGLTLSMFDRLVSL 732
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFG-------- 705
++L+ Q+RMHP++ FP+ FY Q+ +G + + T G
Sbjct: 733 GVVPYMLDTQFRMHPALGKFPSDAFYDKQLKNGT--------PRAMRPTPIGFNWPQPNV 784
Query: 706 --TYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQV 763
Y + E+ +S N E V+ L+ A + IG+V+PY AQV
Sbjct: 785 PICYIPTHPTNAMENNDSNSYSNRAEAELVLAYLRGFLSAQ--ELRPKDIGIVTPYAAQV 842
Query: 764 VAIRKKI---GFEY---ENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKP 817
+R+ I G + N ++V S+DGFQG E++++I+STVR NT S+GF+S P
Sbjct: 843 RLLRQMIRRAGIQTGVDRNTGECGIEVSSVDGFQGREKELMIVSTVRANTNRSLGFVSDP 902
Query: 818 QRVNVALTRARHCLWILGSERTLISSESIWGALV 851
+R NV LTRAR L ++G E TL +WG V
Sbjct: 903 RRCNVTLTRARRGLVVIGHENTLRCDRKVWGPYV 936
>gi|350629790|gb|EHA18163.1| hypothetical protein ASPNIDRAFT_119246 [Aspergillus niger ATCC
1015]
Length = 1071
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 150/277 (54%), Gaps = 21/277 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 581 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 639
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK-----QYLTGTEFGTYS 708
S LN+QYRMHP +S FP+ FY + +G + S+E+ +
Sbjct: 640 GCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGIS----SFERLRRDVDFPWPIADNPMM 695
Query: 709 FINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ----V 763
F + +G E S N E + V KI+ + +KA V Q IG+++PY Q V
Sbjct: 696 FWSNLGNEEISASGTSYLNRTEATNVEKIVTRFFKAGV---QPQDIGIITPYEGQRSYIV 752
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
+++ F+ E+ ++V S+D FQG E+D II+S VR N IGF+S P+R+NVA
Sbjct: 753 SSMQANGTFKKEHYK--EIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVA 810
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
LTRA++ L ILG+ + L S +W L+ K R C
Sbjct: 811 LTRAKYGLAILGNPKVL-SKHPLWNCLLQHFKERHCL 846
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q +KF LN SQ+ A+ + L+R + LI GPPGTGKT T
Sbjct: 397 EVAAAPMKTQMPKKFSVPGLPELNGSQINAVKSVLQRP-------LSLIQGPPGTGKTVT 449
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L +I + L C P+NVA+ +L R+ LK V+ + K +P+
Sbjct: 450 SATIIYHLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPV 504
>gi|342320526|gb|EGU12466.1| ATP dependent helicase [Rhodotorula glutinis ATCC 204091]
Length = 1086
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 153/297 (51%), Gaps = 12/297 (4%)
Query: 588 IKPLNF--LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRS 645
+K L F ++IDEA Q E E IPL G+ V++GD QL + +K + AG +S
Sbjct: 618 LKNLKFRTVLIDEATQATEPECMIPLTF-GVKQLVMVGDHSQLGPTIMNKKAARAGLNQS 676
Query: 646 LFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFG 705
LFERL L + L +QYRMHP +S FP+ FY + +G + + +
Sbjct: 677 LFERLILLGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPQPT 736
Query: 706 TYSFINIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQV 763
T + + G+E+ N E S V KI+ + +KA V Q IG+++PY Q
Sbjct: 737 TPMYFHQNLGQEEISSSGTSFLNRTEASNVEKIVTRFFKAGVMPSQ---IGIITPYEGQR 793
Query: 764 VAIRKKIGFEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVN 821
+ + K ++V S+D FQG E+D +I+S VR N IGF++ P+R+N
Sbjct: 794 SYLVSYMQMNGSLKKELYKEIEVASVDAFQGREKDYVIMSCVRSNEHQGIGFLNDPRRLN 853
Query: 822 VALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
VALTRA++ L ILG+ + L S ++W L+ K ++C NL + ++ SK
Sbjct: 854 VALTRAKYGLVILGNPKVL-SKHALWHYLLTHYKEKKCLVEG-PLNNLQPSMIQFSK 908
Score = 44.3 bits (103), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 12/84 (14%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACTPT 315
LN SQ+ A+ + L++ + LI GPPGTGKT T + ++ L ++ + L P+
Sbjct: 464 LNHSQIYAVKSVLQK-------PLSLIQGPPGTGKTVTSASIVYHLSKMNPGQVLVAAPS 516
Query: 316 NVAITELASRV----LKLVKESYK 335
NVA+ +L ++ LK+V+ + K
Sbjct: 517 NVAVDQLTEKIHQTGLKVVRVTAK 540
>gi|224138824|ref|XP_002326699.1| predicted protein [Populus trichocarpa]
gi|222834021|gb|EEE72498.1| predicted protein [Populus trichocarpa]
Length = 1256
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 147/281 (52%), Gaps = 27/281 (9%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G V +GD CQL ++ K + AG +SLFERL L
Sbjct: 635 VLIDESTQATEPECLIPLVL-GAKQVVFVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 693
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF-----GTYS 708
L +QYRMHPS+S FP+ FY + +G V E+Q +G +F
Sbjct: 694 GVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTVN----ERQS-SGIDFPWPVPNRPM 748
Query: 709 FINIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
F + G+E+ N E + V KI+ ++ V Q IGV++PY Q I
Sbjct: 749 FFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ-ACIGVITPYEGQRAYI 807
Query: 767 RKKIGFEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQR 819
Y +++G ++V S+D FQG E+D II+S VR N IGF++ P+R
Sbjct: 808 -----VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 862
Query: 820 VNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
+NVALTRAR+ + ILG+ + L S + +W +L+ K +C
Sbjct: 863 LNVALTRARYGIVILGNPKVL-SKQPLWNSLLTHYKEHECL 902
Score = 48.5 bits (114), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 21/101 (20%)
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC 307
+FG LN SQV A+ L++ + LI GPPGTGKT T + ++L
Sbjct: 473 RFGAPGLPELNASQVLAVKNVLQKP-------ISLIQGPPGTGKTVTSAAIVLV------ 519
Query: 308 RTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
C P+NVA+ +LA ++ LK+V+ K ++P+
Sbjct: 520 ----CAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 556
>gi|403222822|dbj|BAM40953.1| regulator of nonsense transcripts-related protein [Theileria
orientalis strain Shintoku]
Length = 1221
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/332 (32%), Positives = 165/332 (49%), Gaps = 35/332 (10%)
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS 652
F+++DE AQ E+ + IP+ G VLIGD QL + S + G +SL ERL
Sbjct: 903 FVIVDECAQSIEASNMIPIG-RGCRSLVLIGDHKQLRPTIISMQASTLGLNKSLLERLIE 961
Query: 653 LNHSK-HLLNIQYRMHPSISLFPNLQFY----RNQILDGANVKSKSYEKQYLTGTEFGTY 707
+ HLL+IQ RMHPSI+ FPN+ FY RNQ ++ N K + G
Sbjct: 962 DKVAPVHLLDIQRRMHPSIAEFPNMHFYDGQIRNQDVNDTNRPPILGFKWPVCGNNL--- 1018
Query: 708 SFINIIGGREDFIYHSCR-----NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ 762
F+++ G + + + N +E++ V+ ++ KA G ++ IG+++PY AQ
Sbjct: 1019 VFVDVSTGSPNTQFETSHGTSKFNTMELTCVLALVNSFLKA--GDVKENQIGILTPYDAQ 1076
Query: 763 VVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNV 822
IRK + + + K +++ S+DGFQG E+D+II S VR N IGF+ P+R+NV
Sbjct: 1077 RGMIRKNVNYMKDYKTHL-IEIDSVDGFQGKEKDLIIFSAVRSNVSKDIGFLRDPRRMNV 1135
Query: 823 ALTRARHCLWILGSERT------------LISSESIWGALVCDAKARQCFFNADEERNLA 870
LTRA+ L ILG ER + + V ++ DE NL
Sbjct: 1136 MLTRAKRGLIILGDERPSKLAAFCKLDILKVRMREVMQLNVHVSQLNNYMLYPDE--NLP 1193
Query: 871 KARLEVSKELVEIGAESLTSTSQGGKKEEFEF 902
K+ +++K + A L S S G +K FE
Sbjct: 1194 KSHEDITK----LDARLLKSDSTGKRKNPFEI 1221
>gi|297723147|ref|NP_001173937.1| Os04g0424200 [Oryza sativa Japonica Group]
gi|255675460|dbj|BAH92665.1| Os04g0424200 [Oryza sativa Japonica Group]
Length = 836
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 148/294 (50%), Gaps = 25/294 (8%)
Query: 570 ASLFFSTAS-SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 628
A++ FST S S + S + + ++IDEAAQ +GD QL
Sbjct: 468 AAIVFSTLSFSGSSIFSRMARAFDVVIIDEAAQA-------------------VGDPVQL 508
Query: 629 PAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
PA V S + + G+G SLF+R + +L IQYRMHP IS+FP+ +FY + DG
Sbjct: 509 PATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEG 568
Query: 689 VKSKSYEKQYLTGTEFGTYSFINIIGGR-EDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
+ K Y + FG + F ++ G + S N EV + + ++ +
Sbjct: 569 LSKKRPWHSY---SCFGPFCFFDVDGTESQPSGSGSWVNEDEVEFITLLYHQMAMRYPEL 625
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT 807
K + V+SPY QV ++ + ++ + V ++DGFQG E++++I S VRCN
Sbjct: 626 KSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNK 685
Query: 808 GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFF 861
IGF+S +R+NVA+TRAR + ++GS TL + W LV AK R +F
Sbjct: 686 EQKIGFVSDFRRMNVAITRARSAVLVVGSASTL-KEDKHWNNLVESAKERGRYF 738
>gi|242045720|ref|XP_002460731.1| hypothetical protein SORBIDRAFT_02g033940 [Sorghum bicolor]
gi|241924108|gb|EER97252.1| hypothetical protein SORBIDRAFT_02g033940 [Sorghum bicolor]
Length = 1269
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 148/281 (52%), Gaps = 29/281 (10%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G+ VL+GD CQL ++ K + AG +SLFERL L
Sbjct: 671 VLIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVIL 729
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF-----GTYS 708
L +QYRMHP +S FP+ FY + +G V E+Q +G +F
Sbjct: 730 GVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVN----ERQS-SGIDFPWPVPNRPM 784
Query: 709 FINIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
F + G+E+ N E + V KI+ ++ V Q IGV++PY Q I
Sbjct: 785 FFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ---IGVITPYEGQRAYI 841
Query: 767 RKKIGFEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQR 819
Y +++G ++V S+D FQG E+D II+S VR N IGF++ P+R
Sbjct: 842 -----VNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 896
Query: 820 VNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
+NVALTRAR+ + ILG+ + L S + +W +L+ K +C
Sbjct: 897 LNVALTRARYGIVILGNPKVL-SKQPLWNSLLTHYKEHECL 936
Score = 53.1 bits (126), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 12/102 (11%)
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-K 306
+FG LN SQV A+ + L++ V LI GPPGTGKT T + ++ + + +
Sbjct: 498 RFGAPGLPELNASQVLAVKSVLQKP-------VSLIQGPPGTGKTVTSAAIVYHMAKQGQ 550
Query: 307 CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ L C P+NVA+ +LA ++ LK+V+ K ++P+
Sbjct: 551 GQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPV 592
>gi|453088648|gb|EMF16688.1| hypothetical protein SEPMUDRAFT_122176 [Mycosphaerella populorum
SO2202]
Length = 2003
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 144/273 (52%), Gaps = 13/273 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E S IPL+ G V++GD QLP V SK + + + +SLF R+ +
Sbjct: 1529 VIIDEAAQCVEMSSLIPLKY-GCVKCVMVGDPKQLPPTVFSKEAAKFQYEQSLFVRMQN- 1586
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYS 708
NH K HLL+ QYRMHP IS+FP+ FY + DG AN++ + + L Y
Sbjct: 1587 NHPKDVHLLDTQYRMHPDISVFPSRTFYDGLLKDGPSMANLRKQPWHASSL----LAPYR 1642
Query: 709 FINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F ++ G +S N E+ I + +L + IG++ Y AQ+ ++
Sbjct: 1643 FFDVAGQHSSAPRGNSLVNKAEIEVAIMLYTRLRTDFPTYDFTGKIGIIVTYKAQLREMK 1702
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
++ ++ + D FQG E +III S VR + G+IGF+ +R+NV LTRA
Sbjct: 1703 GTFISKFGPDIADYIEFNTTDAFQGRESEIIIFSCVRASPAGTIGFLQDIRRMNVGLTRA 1762
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCF 860
+ LW+LG+ TL SS W LV DAK R +
Sbjct: 1763 KSSLWVLGNASTL-SSGRYWKKLVDDAKGRDNY 1794
>gi|297601165|ref|NP_001050457.2| Os03g0440200 [Oryza sativa Japonica Group]
gi|255674627|dbj|BAF12371.2| Os03g0440200 [Oryza sativa Japonica Group]
Length = 824
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 148/294 (50%), Gaps = 25/294 (8%)
Query: 570 ASLFFSTAS-SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 628
A++ FST S S + S + + ++IDEAAQ +GD QL
Sbjct: 468 AAIVFSTLSFSGSSIFSRMARAFDVVIIDEAAQA-------------------VGDPVQL 508
Query: 629 PAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
PA V S + + G+G SLF+R + +L IQYRMHP IS+FP+ +FY + DG
Sbjct: 509 PATVISSTAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEG 568
Query: 689 VKSKSYEKQYLTGTEFGTYSFINIIGGR-EDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
+ K Y + FG + F ++ G + S N EV + + ++ +
Sbjct: 569 LSKKRPWHSY---SCFGPFCFFDVDGTESQPSGSGSWVNEDEVEFITLLYHQMAMRYPEL 625
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT 807
K + V+SPY QV ++ + ++ + V ++DGFQG E++++I S VRCN
Sbjct: 626 KSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGCEKEVVIFSCVRCNK 685
Query: 808 GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFF 861
IGF+S +R+NVA+TRAR + ++GS TL + W LV AK R +F
Sbjct: 686 EQKIGFVSDFRRMNVAITRARSAVLVVGSASTL-KEDKHWNNLVESAKERGRYF 738
>gi|356497066|ref|XP_003517385.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine
max]
Length = 1266
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 141/276 (51%), Gaps = 19/276 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD CQL ++ K + AG +SLFERL L
Sbjct: 647 VLIDESTQATEPECLIPLVL-GAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 705
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G V + F +
Sbjct: 706 GVKPIRLQVQYRMHPCLSEFPSNSFYEGTLQNGVTVNERKSSGIDFPWPVPNRPMFFYVQ 765
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E + V KI+ K+ V Q IGV++PY Q I
Sbjct: 766 MGQEEISASGTSYLNRTEAANVEKIVTTFLKSGVVPSQ---IGVITPYEGQRAYI----- 817
Query: 772 FEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
Y +++G ++V S+D FQG E+D II+S VR N IGF++ P+R+NVAL
Sbjct: 818 VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 877
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
TRAR+ + ILG+ + L S + +W +L+ K +C
Sbjct: 878 TRARYGIVILGNPKVL-SKQPLWNSLLTHYKEHECL 912
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 12/102 (11%)
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-K 306
+FG LN SQV A+ + L+R + LI GPPGTGKT T + L+ + + +
Sbjct: 474 RFGAPGLPELNASQVFAVKSVLQRP-------ISLIQGPPGTGKTVTSAALVYHMAKQGQ 526
Query: 307 CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ L C P+NVA+ +LA ++ LK+V+ K ++P+
Sbjct: 527 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 568
>gi|308800562|ref|XP_003075062.1| Sen1 Sen1-related helicase (IC) [Ostreococcus tauri]
gi|119358871|emb|CAL52334.2| Sen1 Sen1-related helicase (IC) [Ostreococcus tauri]
Length = 799
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 152/288 (52%), Gaps = 15/288 (5%)
Query: 578 SSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKIS 637
S S + + +P +++DEA Q E + IPL + H VL+GD QLPA V+S+++
Sbjct: 495 SLSKRFFRINSRPFKTIIVDEACQAIEPATLIPLTIYNA-HCVLVGDPQQLPATVKSRVA 553
Query: 638 DEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQ 697
A + RSLFERL LL+IQYRMHP I FP+ FY ++D + + +
Sbjct: 554 KTARYDRSLFERLMEAGVPAKLLSIQYRMHPEIRCFPSCVFYSGALVDAPKLD----QSR 609
Query: 698 YLTGTE---FGTYSFINIIGGREDFIYHSCR-NIVEVSAVIKILQKLYKAW-VGSKQKVS 752
YL + F + +++ G+E+ R N E ++ +L + + + K ++
Sbjct: 610 YLPAHKYWPFKPFMVFDVVQGQEERASTLSRYNKNEAVFIVDLLVRYLTLFPLTRKSRLD 669
Query: 753 IGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIG 812
I V+S Y Q + + + + V V +ID FQG E D+I++S VR + IG
Sbjct: 670 IMVLSGYREQCTLVHRLLQ---QTSIVNCVNVSTIDAFQGQESDVIVLSCVR-TSATDIG 725
Query: 813 FISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
F++ +R+NVA+TRAR LW++ T +S IW L+ +AK R C+
Sbjct: 726 FLADLRRLNVAITRARCSLWVICKCET-VSKFHIWQLLLKNAKERGCY 772
Score = 42.4 bits (98), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 6/119 (5%)
Query: 185 VHDKTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQ 244
+ + K + I T + + R +++L + + + + S V+E ++ + G
Sbjct: 166 IRASSAKHLWAIPATRLTTHTRHFDALAALQDTRSRFLIKPSSSNVEEPAS-SALTKLGL 224
Query: 245 WDEKFGPSFSSTLNESQVGAMLACLR---RLDCGHRSGV--ELIWGPPGTGKTKTVSML 298
+ KF STLN+ Q A+L R C V LI GPPGTGKTK ++ L
Sbjct: 225 ENSKFATLLKSTLNDPQFEALLLSAHHATRFSCSDHYSVPFSLIQGPPGTGKTKVITSL 283
>gi|115472199|ref|NP_001059698.1| Os07g0495900 [Oryza sativa Japonica Group]
gi|113611234|dbj|BAF21612.1| Os07g0495900, partial [Oryza sativa Japonica Group]
Length = 1121
Score = 149 bits (376), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 142/276 (51%), Gaps = 19/276 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G+ VL+GD CQL ++ K + AG +SLFERL L
Sbjct: 521 VLIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVIL 579
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G V + F +
Sbjct: 580 GVKPFRLQVQYRMHPCLSDFPSNCFYEGTLQNGVTVNERQTPGIDFPWPVPNRPMFFYVQ 639
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E + V KI+ ++ V Q IGV++PY Q I
Sbjct: 640 MGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ---IGVITPYEGQRAYI----- 691
Query: 772 FEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
Y +++G ++V S+D FQG E+D II+S VR N IGF++ P+R+NVAL
Sbjct: 692 VNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 751
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
TRAR+ + ILG+ + L S + +W +L+ K +C
Sbjct: 752 TRARYGIVILGNPKVL-SKQPLWNSLLTHYKEHECL 786
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 12/102 (11%)
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-K 306
+FG LN SQV A+ + L++ + LI GPPGTGKT T + ++ + + +
Sbjct: 348 RFGAPGLPELNASQVLAVKSVLQKP-------ISLIQGPPGTGKTVTSAAIVYHMAKQGQ 400
Query: 307 CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ L C P+NVA+ +LA ++ LK+V+ K ++P+
Sbjct: 401 GQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPV 442
>gi|449685514|ref|XP_002161143.2| PREDICTED: regulator of nonsense transcripts 1-like [Hydra
magnipapillata]
Length = 1153
Score = 149 bits (376), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 150/294 (51%), Gaps = 20/294 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ + G VL+GD CQL +V K + AG +SLFERL L
Sbjct: 653 VLIDESTQATEPECMVPI-VHGTKQLVLVGDHCQLGPVVMCKKAASAGLSQSLFERLVVL 711
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHPS+S FP+ FY + +G V +S F
Sbjct: 712 GIRPIRLQVQYRMHPSLSEFPSNLFYDGTLQNGVTVAERSQPGVDFPWPVGDKPMFFYAT 771
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI + +A V +Q +G+++PY Q I +
Sbjct: 772 TGQEEISSSGTSYLNRTEAATVEKIATRFLRAGVKPEQ---MGIITPYEGQRAYIVAYMQ 828
Query: 772 FE-------YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
F Y+N ++V S+D FQG E+D II+S R N IGF+ P+R+NVAL
Sbjct: 829 FSGSLHSSLYQN-----IEVASVDAFQGREKDYIIMSCARSNEHQGIGFLKDPRRLNVAL 883
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
TR+++ L I+G+ + L S + +W L+ D K ++ NL ++ ++ SK
Sbjct: 884 TRSKYGLIIIGNPKVL-SKQPLWNHLLNDYKEKRVLVEG-PLNNLKESMIQFSK 935
Score = 49.3 bits (116), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC-RTLACTPT 315
LN SQV A+ L+R + LI GPPGTGKT T + ++ L + + L C P+
Sbjct: 489 LNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSASIVYHLAKQGLGQILVCAPS 541
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N+A+ +L ++ LK+V+ + K ++P+
Sbjct: 542 NIAVDQLTEKIHKTGLKVVRLAAKSREAIDSPV 574
>gi|388580348|gb|EIM20663.1| hypothetical protein WALSEDRAFT_54922 [Wallemia sebi CBS 633.66]
Length = 941
Score = 149 bits (376), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 142/271 (52%), Gaps = 9/271 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E E TIPL + G AVL+GD QL ++ +K + AG +SLFERL L
Sbjct: 535 VLIDEATQAAEPECTIPL-IMGCKQAVLVGDHQQLGPVIMNKKAARAGLTQSLFERLVML 593
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
+ L +QYRMHP +S FP+ FY + +G + + T F
Sbjct: 594 GNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPIPDTPMFFYQN 653
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E S KI+ K +KA V Q IG+V+PY Q I +
Sbjct: 654 LGQEEISSSGTSFLNRTEASNCEKIVTKFFKAGVVPAQ---IGIVTPYEGQRSYIVNYMQ 710
Query: 772 FEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V+V S+D FQG E+D II+S VR N IGF+S P+R+NVA+TRA++
Sbjct: 711 FNGALKKELYNQVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSDPRRLNVAMTRAKY 770
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCF 860
ILG+ + ++S +W L+ K ++
Sbjct: 771 GAVILGNPK-ILSKHPLWHHLLTHFKEKKTL 800
Score = 50.4 bits (119), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
+ Q +KF LN SQ+ A+ + L++ + LI GPPGTGKT T + ++
Sbjct: 358 RTQMPKKFSAPNLPELNHSQMYAVKSVLQK-------PLSLIQGPPGTGKTVTSASVVYH 410
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L ++ + L C P+NVA+ +L ++ LK V+ + K ++PI
Sbjct: 411 LSKMNPGQVLVCAPSNVAVDQLCEKIHLTGLKTVRLTAKSREAVDSPI 458
>gi|218199657|gb|EEC82084.1| hypothetical protein OsI_26082 [Oryza sativa Indica Group]
Length = 1277
Score = 149 bits (376), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 142/276 (51%), Gaps = 19/276 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G+ VL+GD CQL ++ K + AG +SLFERL L
Sbjct: 677 VLIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVIL 735
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G V + F +
Sbjct: 736 GVKPFRLQVQYRMHPCLSDFPSNCFYEGTLQNGVTVNERQTPGIDFPWPVPNRPMFFYVQ 795
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E + V KI+ ++ V Q IGV++PY Q I
Sbjct: 796 MGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ---IGVITPYEGQRAYI----- 847
Query: 772 FEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
Y +++G ++V S+D FQG E+D II+S VR N IGF++ P+R+NVAL
Sbjct: 848 VNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 907
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
TRAR+ + ILG+ + L S + +W +L+ K +C
Sbjct: 908 TRARYGIVILGNPKVL-SKQPLWNSLLTHYKEHECL 942
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 12/102 (11%)
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-K 306
+FG LN SQV A+ + L++ + LI GPPGTGKT T + ++ + + +
Sbjct: 504 RFGAPGLPELNASQVLAVKSVLQKP-------ISLIQGPPGTGKTVTSAAIVYHMAKQGQ 556
Query: 307 CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ L C P+NVA+ +LA ++ LK+V+ K ++P+
Sbjct: 557 GQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPV 598
>gi|378734810|gb|EHY61269.1| regulator-nonsense transcripts 1 [Exophiala dermatitidis
NIH/UT8656]
Length = 1076
Score = 149 bits (375), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 149/273 (54%), Gaps = 13/273 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 602 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 660
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
+ LN+QYRMHP +S FP+ FY + +G ++ + + + F +
Sbjct: 661 GCAPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTMQDRLRPDVDFPWPVADSPMMFWSN 720
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ----VVAIR 767
+G E S N E + V KI+ + +KA V + SIGV++PY Q V +++
Sbjct: 721 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVHPQ---SIGVITPYEGQRSFIVSSMQ 777
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
F+ E ++V S+D FQG E+D II+S VR N IGF+S P+R+NVALTRA
Sbjct: 778 TNGTFKKELYK--EIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 835
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCF 860
++ L ILG+ + L S +W L+ K R C
Sbjct: 836 KYGLVILGNPKVL-SKHPLWHYLLLHFKERNCL 867
Score = 54.7 bits (130), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 12/106 (11%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q +KF LN SQ+ A+ + L++ + LI GPPGTGKT T
Sbjct: 418 EVAAAPMKTQLPKKFTVPGLPDLNSSQINAVKSVLQK-------PLSLIQGPPGTGKTVT 470
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYK 335
+ ++ L +I + L C P+NVA+ +L R+ LK V+ + K
Sbjct: 471 SATIIYHLSKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAK 516
>gi|116197821|ref|XP_001224722.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88178345|gb|EAQ85813.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 1071
Score = 149 bits (375), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/272 (36%), Positives = 149/272 (54%), Gaps = 11/272 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 595 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKL 653
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
N + LN+QYRMHP +S FP+ FY + +G V + + + F +
Sbjct: 654 NFTPIRLNVQYRMHPCLSKFPSNMFYDGSLQNGVTVSERLRTDVDFPWPVADTPMMFWSN 713
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRK 768
+G E S N E + V KI+ + KA V + + IGV++PY Q +V+ +
Sbjct: 714 LGNEEISASGTSYLNRTEAANVEKIVTRFLKAGV---KALDIGVITPYEGQRSYIVSTMQ 770
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
G ++ + V+V S+D FQG E+D I++S VR N IGF+S P+R+NVALTRA+
Sbjct: 771 NTG-TFKKETYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALTRAK 829
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCF 860
+ L I+G+ + L S +W L+ K +C
Sbjct: 830 YGLVIIGNPKVL-SKHELWHHLLVHFKDCKCL 860
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 12/106 (11%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ K Q +KF + LN SQ+ A+ L + + LI GPPGTGKT T
Sbjct: 411 EVAVAPMKTQMPKKFHVAGLPELNHSQITAIKTVLS-------NPLSLIQGPPGTGKTVT 463
Query: 295 VSMLLLTLLRI-KCRTLACTPTNVAITELASRV----LKLVKESYK 335
+ ++ L +I + L C P+NVA+ +L R+ LK+V+ + K
Sbjct: 464 SATIIYHLAKINNSQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAK 509
>gi|50509972|dbj|BAD30435.1| putative type 1 RNA helicase [Oryza sativa Japonica Group]
gi|222637078|gb|EEE67210.1| hypothetical protein OsJ_24327 [Oryza sativa Japonica Group]
Length = 1277
Score = 149 bits (375), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 142/276 (51%), Gaps = 19/276 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G+ VL+GD CQL ++ K + AG +SLFERL L
Sbjct: 677 VLIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVIL 735
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G V + F +
Sbjct: 736 GVKPFRLQVQYRMHPCLSDFPSNCFYEGTLQNGVTVNERQTPGIDFPWPVPNRPMFFYVQ 795
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E + V KI+ ++ V Q IGV++PY Q I
Sbjct: 796 MGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ---IGVITPYEGQRAYI----- 847
Query: 772 FEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
Y +++G ++V S+D FQG E+D II+S VR N IGF++ P+R+NVAL
Sbjct: 848 VNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 907
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
TRAR+ + ILG+ + L S + +W +L+ K +C
Sbjct: 908 TRARYGIVILGNPKVL-SKQPLWNSLLTHYKEHECL 942
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 12/102 (11%)
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-K 306
+FG LN SQV A+ + L++ + LI GPPGTGKT T + ++ + + +
Sbjct: 504 RFGAPGLPELNASQVLAVKSVLQKP-------ISLIQGPPGTGKTVTSAAIVYHMAKQGQ 556
Query: 307 CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ L C P+NVA+ +LA ++ LK+V+ K ++P+
Sbjct: 557 GQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPV 598
>gi|12836885|gb|AAK08652.1|AF182947_1 nonsense mRNA reducing factor 1 NORF1 [Mus musculus]
Length = 1113
Score = 149 bits (375), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 157/307 (51%), Gaps = 15/307 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 628 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 686
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 687 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 746
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 747 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 803
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 804 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 863
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKE-----LVEIG 884
+ I+G+ + L S + +W L+ K ++ NL ++ ++ SK V G
Sbjct: 864 GVIIVGNPKAL-SKQPLWNHLLSYYKEQKALVEG-PLNNLRESLMQFSKPRKLVNTVNPG 921
Query: 885 AESLTST 891
A +T+
Sbjct: 922 ARFMTTA 928
Score = 50.4 bits (119), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 451 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 503
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 504 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 551
>gi|170784811|ref|NP_109605.2| regulator of nonsense transcripts 1 isoform b [Mus musculus]
gi|11993646|gb|AAG42830.1|AF322655_1 regulator of nonsense transcripts 1 [Mus musculus]
gi|30354613|gb|AAH52149.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Mus
musculus]
gi|148696867|gb|EDL28814.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Mus musculus]
Length = 1113
Score = 149 bits (375), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 157/307 (51%), Gaps = 15/307 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 628 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 686
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 687 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 746
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 747 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 803
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 804 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 863
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKE-----LVEIG 884
+ I+G+ + L S + +W L+ K ++ NL ++ ++ SK V G
Sbjct: 864 GVIIVGNPKAL-SKQPLWNHLLSYYKEQKALVEG-PLNNLRESLMQFSKPRKLVNTVNPG 921
Query: 885 AESLTST 891
A +T+
Sbjct: 922 ARFMTTA 928
Score = 50.4 bits (119), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 451 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 503
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 504 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 551
>gi|403215170|emb|CCK69670.1| hypothetical protein KNAG_0C05720 [Kazachstania naganishii CBS
8797]
Length = 1000
Score = 149 bits (375), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 185/383 (48%), Gaps = 43/383 (11%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
++IDE+ Q E E IP+ + G +L+GD QL P ++E K +D AG +SLFERL S
Sbjct: 598 VLIDESTQATEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAAD-AGLKQSLFERLIS 655
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L H L +QYRM+P +S FP+ FY + +G ++ ++ G
Sbjct: 656 LGHVPIRLEVQYRMNPHLSEFPSNMFYEGTLQNGVTIEQRTVLNSTFPWPIHGVPMMFWA 715
Query: 713 IGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
GRE+ + S N +E +I+ KL++ V +Q IGV++PY Q +
Sbjct: 716 NYGREEISGNGTSYLNRIEAMNCERIITKLFRDGVKPEQ---IGVITPYEGQRAYV---- 768
Query: 771 GFEYENKDG-------FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
+Y +G V+V S+D FQG E+D II+S VR N +IGF+ P+R+NV
Sbjct: 769 -LQYMQMNGAMDKSLYLKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVG 827
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEI 883
LTRA++ L ILG+ R+L S +W L+ + + C + NL ++++K
Sbjct: 828 LTRAKYGLVILGNPRSL-SRNLLWNHLLVHFREKGCLVEGALD-NLQLCTVQLTK----- 880
Query: 884 GAESLTSTSQG--GKKEEFEFEFVKAFRSINLIHKVLNSLGRFDELLMLENGSGNFMEAA 941
L +G G K+ +FE R+ S+ FD ++ G+ A
Sbjct: 881 ----LPPRKRGGNGNKDANQFEIDVNTRT---------SIDDFDLQSLMSFGAPEGANAF 927
Query: 942 NMAVLEGDIFLATDLLQKAWNFR 964
N D F ++ L WNF+
Sbjct: 928 NNVFTANDDF-SSFLNNGYWNFQ 949
Score = 54.7 bits (130), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 12/94 (12%)
Query: 247 EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI- 305
++F S + LN SQ A+ L R + LI GPPGTGKT T + ++ L +I
Sbjct: 428 KEFSISHFAHLNASQSNAVKHVLER-------PLSLIQGPPGTGKTVTSATIVYHLAKIH 480
Query: 306 KCRTLACTPTNVAITELASRV----LKLVKESYK 335
K R L C P+NVA+ LAS++ LK+V+ + K
Sbjct: 481 KDRILVCAPSNVAVDHLASKLRDLGLKVVRLTAK 514
>gi|109504000|ref|XP_001070971.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Rattus norvegicus]
gi|392353861|ref|XP_003751615.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Rattus norvegicus]
gi|149036014|gb|EDL90680.1| rCG38820 [Rattus norvegicus]
Length = 1113
Score = 149 bits (375), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 157/307 (51%), Gaps = 15/307 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 628 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 686
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 687 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 746
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 747 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 803
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 804 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 863
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKE-----LVEIG 884
+ I+G+ + L S + +W L+ K ++ NL ++ ++ SK V G
Sbjct: 864 GVIIVGNPKAL-SKQPLWNHLLSYYKEQKALVEG-PLNNLRESLMQFSKPRKLVNTVNPG 921
Query: 885 AESLTST 891
A +T+
Sbjct: 922 ARFMTTA 928
Score = 50.4 bits (119), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 451 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 503
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 504 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 551
>gi|48727634|gb|AAT46119.1| RENT1 [Mus musculus]
Length = 1113
Score = 149 bits (375), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 157/307 (51%), Gaps = 15/307 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 628 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 686
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 687 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 746
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 747 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 803
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 804 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 863
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKE-----LVEIG 884
+ I+G+ + L S + +W L+ K ++ NL ++ ++ SK V G
Sbjct: 864 GVIIVGNPKAL-SKQPLWNHLLSYYKEQKALVEG-PLNNLRESLMQFSKPRKLVNTVNPG 921
Query: 885 AESLTST 891
A +T+
Sbjct: 922 ARFMTTA 928
Score = 48.9 bits (115), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + I GPPGTGKT T + ++
Sbjct: 451 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSFIQGPPGTGKTVTSATIVYH 503
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 504 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 551
>gi|255937245|ref|XP_002559649.1| Pc13g12330 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584269|emb|CAP92302.1| Pc13g12330 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1079
Score = 149 bits (375), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 147/276 (53%), Gaps = 13/276 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 586 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 644
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
S LN+QYRMHP +S FP+ FY + +G + + + + F +
Sbjct: 645 GCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGITIADRVRRDVDFPWPIIDDPMMFWSN 704
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ----VVAIR 767
+G E S N E + V KI+ + +KA V Q IG+++PY Q V +++
Sbjct: 705 LGNEEISASGTSYLNRTEATNVEKIVTRFFKAGV---QPKDIGIITPYEGQRSYIVSSMQ 761
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
F+ E+ ++V S+D FQG E+D II+S VR N IGF+S P+R+NVALTRA
Sbjct: 762 ANGTFKKEHYK--EIEVASVDAFQGREKDYIILSCVRSNDHQGIGFLSDPRRLNVALTRA 819
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
R L ILG+ + L S +W L+ K R C
Sbjct: 820 RFGLVILGNPKVL-SKHPLWNCLLQHFKERHCLVEG 854
Score = 56.2 bits (134), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 12/106 (11%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q +KF LN SQ+ A+ + L+R + LI GPPGTGKT T
Sbjct: 402 EVAAAPMKTQIPKKFSVPGLPDLNGSQINAVKSVLQRP-------LSLIQGPPGTGKTVT 454
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYK 335
+ ++ L +I + L C P+NVA+ +L R+ LK V+ + K
Sbjct: 455 SATIIYHLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAK 500
>gi|357122747|ref|XP_003563076.1| PREDICTED: regulator of nonsense transcripts 1 homolog
[Brachypodium distachyon]
Length = 1267
Score = 149 bits (375), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 147/281 (52%), Gaps = 29/281 (10%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G+ VL+GD CQL ++ K + AG +SLFERL L
Sbjct: 668 VLIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVIL 726
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF-----GTYS 708
L +QYRMHP +S FP+ FY + +G V E+Q TG +F
Sbjct: 727 GVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVN----ERQS-TGIDFPWPVPNRPM 781
Query: 709 FINIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
F + G E+ N E + V KI+ ++ V Q IGV++PY Q I
Sbjct: 782 FFYVQMGVEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ---IGVITPYEGQRAYI 838
Query: 767 RKKIGFEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQR 819
Y +++G ++V S+D FQG E+D II+S VR N IGF++ P+R
Sbjct: 839 -----VNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 893
Query: 820 VNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
+NVALTRAR+ + +LG+ + L S + +W +L+ K +C
Sbjct: 894 LNVALTRARYGIVVLGNPKVL-SKQPLWNSLLTHYKEHECL 933
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 12/103 (11%)
Query: 247 EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI- 305
++FG LN SQV A+ + L++ V LI GPPGTGKT T + ++ + +
Sbjct: 494 KRFGAPGLPELNASQVLAVKSVLQKP-------VSLIQGPPGTGKTVTSAAIVYHMAKQG 546
Query: 306 KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ + L C P+NVA+ +LA ++ LK+V+ K ++P+
Sbjct: 547 QGQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPV 589
>gi|124802033|ref|XP_001347342.1| regulator of nonsense transcripts, putative [Plasmodium falciparum
3D7]
gi|23494920|gb|AAN35255.1|AE014829_55 regulator of nonsense transcripts, putative [Plasmodium falciparum
3D7]
Length = 1554
Score = 149 bits (375), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 141/264 (53%), Gaps = 19/264 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DEA Q E E +PL + G VL+GD CQL ++ K + AG G+SLFERL L
Sbjct: 951 VLVDEATQSTEPECLVPL-VTGAKQIVLVGDHCQLGPIIVCKKAANAGLGKSLFERLVML 1009
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
+ L +QYRMHP++S FP+ FY + +G +K + Y + F
Sbjct: 1010 GITPFRLEVQYRMHPALSEFPSYVFYDGSLQNGITLKEREYPLKSFPWPNAKCPMFFYNS 1069
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI----R 767
G E+ S N E S + K+++ L + + Q IGV++PY Q I +
Sbjct: 1070 TGLEEMSASGTSYLNRSEASNMEKLVRTLLQCGLKPSQ---IGVITPYEGQRAYITSLFQ 1126
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
K I F+ + ++V S+D FQG E+D I++S VR N IGF++ P+R+NVALTRA
Sbjct: 1127 KNISFQ----NSSDIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRA 1182
Query: 828 RHCLWILGSERTL-----ISSESI 846
++ L I G+ + L IS E I
Sbjct: 1183 KYGLIICGNAKVLSRHHFISREKI 1206
Score = 50.4 bits (119), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 255 STLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC-RTLACT 313
+ LN SQ+ A+ L S + LI GPPGTGKT T + L+ L+++ + L
Sbjct: 785 APLNHSQIDAIKRSLL-------SPLSLIQGPPGTGKTLTCATLVYHLVKMNMGKVLVTA 837
Query: 314 PTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRL 359
P+NVA+ +L+ R+ + + + S+S + + + L N+ +L
Sbjct: 838 PSNVAVDQLSVRIHRSGLKVVRLCSKSRESVPSIAEYLYLHNQMKL 883
>gi|429860740|gb|ELA35464.1| ATP-dependent helicase nam7 [Colletotrichum gloeosporioides Nara
gc5]
Length = 1088
Score = 149 bits (375), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/272 (36%), Positives = 149/272 (54%), Gaps = 11/272 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL +L
Sbjct: 611 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVNL 669
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
LNIQYRMHP +S FP+ FY + +G + + + + F +
Sbjct: 670 RLVPIRLNIQYRMHPCLSEFPSNMFYDGSLQNGVTHRERLRRDVDFPWPVADMPMMFWSN 729
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRK 768
+G E S N E S V K++ + +KA V + IGV++PY Q +V+ +
Sbjct: 730 LGNEEISASGTSYLNRTEASNVEKVVTRFFKAGV---KPGDIGVITPYEGQRSYIVSTMQ 786
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
G ++ + V+V S+D FQG E+D I++S VR N IGF+S P+R+NVALTRA+
Sbjct: 787 NTG-TFKKESYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALTRAK 845
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCF 860
+ L I+G+ + L S +W L+ K R+C
Sbjct: 846 YGLVIIGNPKVL-SKHELWHHLLVHFKERKCL 876
Score = 51.6 bits (122), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 12/106 (11%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
++ +K +KF LN SQ+ A+ A L + + LI GPPGTGKT T
Sbjct: 427 DVAVAPQKTTMPKKFSVPGLPDLNTSQIAAIKAVLS-------TPLSLIQGPPGTGKTVT 479
Query: 295 VSMLLLTLLRI-KCRTLACTPTNVAITELASRV----LKLVKESYK 335
+ ++ L ++ + L C P+NVA+ +L R+ LK+V+ + K
Sbjct: 480 SATIIYHLCKMNNGQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAK 525
>gi|403367086|gb|EJY83352.1| Splicing endonuclease positive effector sen1, putative [Oxytricha
trifallax]
Length = 1679
Score = 149 bits (375), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 171/343 (49%), Gaps = 36/343 (10%)
Query: 542 RNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSY--KLHSVEIKPLNFLVIDEA 599
+ + N D+ K +E RA + +T S S KL ++ + +L++DEA
Sbjct: 1094 KEMPNGQDKFMFNGKNKKKDVERMIINRAQIICTTLSMSVSDKLEIIKQGDIEYLIVDEA 1153
Query: 600 AQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHL 659
Q E + IP + +L+GD+ QLPA S SD+ + RSLFER + +K +
Sbjct: 1154 CQCVELTNLIPFEHEP-KKVILVGDQQQLPATTFSDNSDKTFYSRSLFERFLNCGVNKFM 1212
Query: 660 LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLT------GTEFGTYSFINII 713
L+IQYRMHPSI FP+ QFY + D +V + + L F ++
Sbjct: 1213 LSIQYRMHPSIRQFPSNQFYEGGLKDSESVIQRQQDFSTLPVGLRVLNQTVSNLIFFDLK 1272
Query: 714 GGREDFIYHSCRNIVEVSAVIKILQKLYK------------AWVGS-KQKVS-------- 752
G+E S N E ++ + Q + K A V S QK+
Sbjct: 1273 YGQESVNDTSKSNKDEAQFILTLFQDIIKIILQKASQTDFPANVNSDDQKMKHILGDLRQ 1332
Query: 753 -IGVVSPYTAQVVAIRKKIGFEYENKDGFT---VKVKSIDGFQGGEEDIIIISTVRCNTG 808
+G++SPY +QV + K + + K+GF +++ ++D +QG E+DIIIIS VR +
Sbjct: 1333 RVGIISPYKSQVRTL-KDYMYPFLKKNGFPIDLIEINTVDAYQGREKDIIIISCVRGSQE 1391
Query: 809 GSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
+GF++ +R+NVA+TRARH LW++G+ TL +++ W V
Sbjct: 1392 RQLGFLNDYRRMNVAVTRARHFLWVVGNSTTLNRNKN-WNNFV 1433
Score = 50.8 bits (120), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 62/127 (48%), Gaps = 19/127 (14%)
Query: 226 TDSVVDERCELCSVQRKG---QWDEK------FGPSFSSTLNESQVGAMLACLRRLDCGH 276
D +++ + LC Q + ++DEK F +F S N+SQ A+ ++
Sbjct: 851 ADIILNPQRFLCDKQTQDPFKKFDEKQSRMQAFVYNFRSNFNDSQREALEQVVKM----K 906
Query: 277 RSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRT-LACTPTNVAITELASRVLK-----LV 330
+ LI GPPGTGKT T+ +L L+ + L C P+N AI E+ R++ L+
Sbjct: 907 KEDFLLIQGPPGTGKTHTIQGILGMLISSNVKKILICGPSNAAIDEILIRIVTHKLFGLL 966
Query: 331 KESYKRD 337
ES RD
Sbjct: 967 NESQLRD 973
>gi|392333562|ref|XP_003752928.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Rattus norvegicus]
gi|392353859|ref|XP_003751614.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Rattus norvegicus]
Length = 1124
Score = 149 bits (375), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 157/307 (51%), Gaps = 15/307 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 639 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 697
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 698 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 757
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 758 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 814
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 815 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 874
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKE-----LVEIG 884
+ I+G+ + L S + +W L+ K ++ NL ++ ++ SK V G
Sbjct: 875 GVIIVGNPKAL-SKQPLWNHLLSYYKEQKALVEG-PLNNLRESLMQFSKPRKLVNTVNPG 932
Query: 885 AESLTST 891
A +T+
Sbjct: 933 ARFMTTA 939
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 462 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 514
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 515 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 562
>gi|170784813|ref|NP_001116301.1| regulator of nonsense transcripts 1 isoform a [Mus musculus]
gi|150387852|sp|Q9EPU0.2|RENT1_MOUSE RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=ATP-dependent helicase RENT1; AltName:
Full=Nonsense mRNA reducing factor 1; Short=NORF1;
AltName: Full=Up-frameshift suppressor 1 homolog;
Short=mUpf1
gi|33989570|gb|AAH56442.1| Upf1 protein [Mus musculus]
Length = 1124
Score = 149 bits (375), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 157/307 (51%), Gaps = 15/307 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 639 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 697
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 698 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 757
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 758 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 814
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 815 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 874
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKE-----LVEIG 884
+ I+G+ + L S + +W L+ K ++ NL ++ ++ SK V G
Sbjct: 875 GVIIVGNPKAL-SKQPLWNHLLSYYKEQKALVEG-PLNNLRESLMQFSKPRKLVNTVNPG 932
Query: 885 AESLTST 891
A +T+
Sbjct: 933 ARFMTTA 939
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ V K Q ++F LN SQV A+ L+R + LI GPPGTGKT T
Sbjct: 455 EVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVT 507
Query: 295 VSMLLLTLLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 508 SATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 562
>gi|323347166|gb|EGA81441.1| Nam7p [Saccharomyces cerevisiae Lalvin QA23]
Length = 971
Score = 149 bits (375), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 149/272 (54%), Gaps = 11/272 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
++IDE+ Q E IP+ + G +L+GD QL P ++E K +D AG +SLFERL S
Sbjct: 569 VLIDESTQASXPECLIPI-VKGAKQVILVGDHQQLGPVILERKAAD-AGLKQSLFERLIS 626
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L H L +QYRM+P +S FP+ FY + +G ++ ++ G
Sbjct: 627 LGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWA 686
Query: 713 IGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
GRE+ + S N +E +I+ KL++ V +Q IGV++PY Q I + +
Sbjct: 687 NYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQ---IGVITPYEGQRAYILQYM 743
Query: 771 GFEYE-NKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
+KD + V+V S+D FQG E+D II+S VR N +IGF+ P+R+NV LTRA+
Sbjct: 744 QMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 803
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCF 860
+ L ILG+ R+L + ++W L+ + + C
Sbjct: 804 YGLVILGNPRSL-ARNTLWNHLLIHFREKGCL 834
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 15/117 (12%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRT 309
P+F+ LN SQ A+ L+R + LI GPPGTGKT T + ++ L +I K R
Sbjct: 404 PNFAQ-LNSSQSNAVSHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRI 455
Query: 310 LACTPTNVAITELASRV----LKLVKESYK--RDSRSNTPICPLGDILLFGNKDRLK 360
L C P+NVA+ LA+++ LK+V+ + K D S+ L +++ G K LK
Sbjct: 456 LVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLVGRGAKGELK 512
>gi|396485880|ref|XP_003842280.1| similar to regulator of nonsense transcripts 1 [Leptosphaeria
maculans JN3]
gi|312218856|emb|CBX98801.1| similar to regulator of nonsense transcripts 1 [Leptosphaeria
maculans JN3]
Length = 1080
Score = 149 bits (375), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/273 (38%), Positives = 147/273 (53%), Gaps = 13/273 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + AG +SLFERL L
Sbjct: 602 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAATAGLNQSLFERLVIL 660
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
S L +QYRMHP +S FP+ FY + +G ++ + + + F +
Sbjct: 661 GCSPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTMQERIRRDVDFPWPVVDSPMMFWSN 720
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRK 768
+G E S N E V KI+ + +KA V Q IG+++PY Q VV+ +
Sbjct: 721 LGVEEISASGTSYLNRTEAQNVEKIVTRFFKAGV---QPSDIGIITPYEGQRSYVVSSMQ 777
Query: 769 KIG-FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
G F+ EN V+V S+D FQG E+D II+S VR N IGF+S P+R+NVALTRA
Sbjct: 778 ATGSFKKENYK--EVEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 835
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCF 860
++ L ILG+ + L S +W L+ K R C
Sbjct: 836 KYGLVILGNPKVL-SKHPLWHYLLLHFKERNCL 867
Score = 53.9 bits (128), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ S K KF LN SQ+ A+ + L++ + LI GPPGTGKT T
Sbjct: 418 EVASAPMKISIPRKFSVPGLPELNASQINAVKSVLQKP-------LSLIQGPPGTGKTVT 470
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L +I + L C P+NVA+ +L R+ LK V+ + K +P+
Sbjct: 471 SATIIYHLCKISGSQVLVCAPSNVAVDQLCERIHLTGLKTVRVTAKSREDVESPV 525
>gi|301613470|ref|XP_002936221.1| PREDICTED: probable helicase senataxin [Xenopus (Silurana)
tropicalis]
Length = 2535
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 154/285 (54%), Gaps = 15/285 (5%)
Query: 589 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
+P + +++DEA Q E E+ IPL L + VL+GD QLP V S ++E G+G+SL
Sbjct: 2076 EPFSCVIVDEAGQSCEVENLIPL-LHRCSKLVLVGDPEQLPPTVISMKAEELGYGQSLMS 2134
Query: 649 RLTSLNHSKHL------LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGT 702
R+ S S L +QYRMHP I LFP+ FY+ + + E + +
Sbjct: 2135 RMCSFLDSTGTKSPVLHLTVQYRMHPDICLFPSHYFYKRML----KTDRATEEVRCSSDW 2190
Query: 703 EFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ 762
F Y ++ G E S N E+ + ++ KL K+ +IGV++PY AQ
Sbjct: 2191 PFQPYMVFDVADGFEQKERESFCNPQEIKVAVALI-KLIKSRKKEFCFRNIGVITPYRAQ 2249
Query: 763 VVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCN-TGGSIGFISKPQRVN 821
+ I +++ + N D +V ++DGFQG ++D II++ VR N T G IGF++ QR+N
Sbjct: 2250 KMRIIEELRRAFGN-DIRPGEVDTVDGFQGRQKDCIIVTCVRANSTQGGIGFLASRQRLN 2308
Query: 822 VALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEE 866
V +TRA+ L+ILGS RTL+ ++ W L+ DA+ R EE
Sbjct: 2309 VTITRAKFSLFILGSLRTLMENKD-WNHLIQDAQRRGALIKTREE 2352
Score = 45.4 bits (106), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL----------------RIKCRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL +L + R L C P+N A+ +L +
Sbjct: 1866 LIHGPPGTGKSKTIVGLLYRILMENGSSTVPVQNLSAKNKRNRVLVCAPSNAALDDLMKK 1925
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE + NTP+ GDI L
Sbjct: 1926 IILEFKE---KCHNKNTPLGNCGDINL 1949
>gi|71016830|ref|XP_758928.1| hypothetical protein UM02781.1 [Ustilago maydis 521]
gi|46098459|gb|EAK83692.1| hypothetical protein UM02781.1 [Ustilago maydis 521]
Length = 3036
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 147/267 (55%), Gaps = 10/267 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E + IPL+ G +++GD QLP V S+ +++ G+ +SLF R+
Sbjct: 1722 VVIDEAAQAVELSTIIPLRY-GCKQCIMVGDPNQLPPTVISQEAEKLGYSQSLFVRMFER 1780
Query: 654 N-HSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKS---KSYEKQYLTGTEFGTYSF 709
+ + HLL+IQYRMHP IS+FP+ FY +++ DG N+ + + K LT + F
Sbjct: 1781 SPQAVHLLSIQYRMHPEISVFPSKAFYDSKLQDGPNMAQLTRQPWHKFELT----RPFKF 1836
Query: 710 INIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKK 769
++I HS N E + + + ++L IGVV+ Y AQV +++
Sbjct: 1837 LSIKAPESPGRMHSIINREEANVALALYERLRIDNPSENFDYRIGVVTMYKAQVFELKRT 1896
Query: 770 IGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFISKPQRVNVALTRAR 828
Y + ++DGFQG E+DIII+S VR SIGF+S +R+NVA+TRA+
Sbjct: 1897 FQQRYGLDIVERIDFNTVDGFQGQEKDIIILSCVRSAAEPRSIGFLSDQRRLNVAVTRAK 1956
Query: 829 HCLWILGSERTLISSESIWGALVCDAK 855
L+I+G+ L + IW LV A+
Sbjct: 1957 SNLFIIGNAEHLRRGDPIWDRLVTTAE 1983
Score = 43.9 bits (102), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 57/139 (41%), Gaps = 35/139 (25%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTL-------------- 302
+NE Q A+L L G LI GPPGTGKTKT+ L+
Sbjct: 1472 VNEPQARAILGSL------ATEGFSLIQGPPGTGKTKTICALIGAFVSSRKGPTTSIQAG 1525
Query: 303 -----LRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKD 357
L + L C P+N AI E+A R ++ + D + P I+ G D
Sbjct: 1526 QNQGKLGATKKILLCAPSNAAIDEVAKRARAGIRLA---DGKVIHP-----KIVRMGRDD 1577
Query: 358 RLKVNPGFEEIYLNYRIKK 376
+ V+ ++I L Y I +
Sbjct: 1578 TMNVS--VKDIALEYLIDQ 1594
>gi|425767683|gb|EKV06249.1| Regulator of nonsense transcript, putative [Penicillium digitatum
PHI26]
gi|425780378|gb|EKV18385.1| Regulator of nonsense transcript, putative [Penicillium digitatum
Pd1]
Length = 1079
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 147/276 (53%), Gaps = 13/276 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 586 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 644
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
S LN+QYRMHP +S FP+ FY + +G + + + + F +
Sbjct: 645 GCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGITIADRVRRDVDFPWPIIDDPMMFWSN 704
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ----VVAIR 767
+G E S N E + V KI+ + +KA V Q IG+++PY Q V +++
Sbjct: 705 LGNEEISASGTSYLNRTEATNVEKIVTRFFKAGV---QPRDIGIITPYEGQRSYIVSSMQ 761
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
F+ E+ ++V S+D FQG E+D II+S VR N IGF+S P+R+NVALTRA
Sbjct: 762 ATGTFKKEHYK--EIEVASVDAFQGREKDYIILSCVRSNDHQGIGFLSDPRRLNVALTRA 819
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
R L ILG+ + L S +W L+ K R C
Sbjct: 820 RFGLVILGNPKVL-SKHPLWNCLLQHFKERHCLVEG 854
Score = 56.2 bits (134), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 12/106 (11%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q +KF LN SQ+ A+ + L+R + LI GPPGTGKT T
Sbjct: 402 EVAAAPMKTQIPKKFSVPGLPDLNGSQINAVKSVLQRP-------LSLIQGPPGTGKTVT 454
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYK 335
+ ++ L +I + L C P+NVA+ +L R+ LK V+ + K
Sbjct: 455 SATIIYHLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAK 500
>gi|405953739|gb|EKC21342.1| Regulator of nonsense transcripts 1 [Crassostrea gigas]
Length = 1108
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 160/308 (51%), Gaps = 16/308 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IP+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 616 VLIDESTQATEPECMIPVVL-GCRQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 674
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + + F
Sbjct: 675 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVAPGDRVRKGLDIPWPQGDKPMFFYTT 734
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI + ++ V +Q IG+++PY Q I + +
Sbjct: 735 SGQEEISSSGTSYLNRTEAANVEKIATRFLRSNVKPEQ---IGIITPYEGQRAYIVQYMQ 791
Query: 772 FEYE-NKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+ NK + ++V S+D FQG E+D II+S VR N IGF++ P+R+NVALTRA++
Sbjct: 792 YSGSLNKKLYQEIEVASVDAFQGREKDFIILSCVRSNEHQGIGFLNDPRRLNVALTRAKY 851
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAESLT 889
+ I+G+ + L S + +W L+ K ++C NL ++ ++ SK L
Sbjct: 852 GIIIVGNPKVL-SKQPLWNHLLTYYKEQKCLVEG-PLNNLKESMIQFSK------PRKLV 903
Query: 890 STSQGGKK 897
+TS G +
Sbjct: 904 NTSNPGGR 911
Score = 50.4 bits (119), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ V K Q ++F LN SQV A+ L+R + LI GPPGTGKT T
Sbjct: 432 EVEDVVIKCQLPKRFSVPNLPELNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVT 484
Query: 295 VSMLLLTLLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L++ + L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 485 SATIVYHLVKQNNGQVLVCAPSNIAVDQLTEKIHKTGLKVVRLCAKSREAIDSPV 539
>gi|148696866|gb|EDL28813.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Mus musculus]
Length = 1131
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 157/307 (51%), Gaps = 15/307 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 646 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 704
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 705 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 764
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 765 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 821
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 822 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 881
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKE-----LVEIG 884
+ I+G+ + L S + +W L+ K ++ NL ++ ++ SK V G
Sbjct: 882 GVIIVGNPKAL-SKQPLWNHLLSYYKEQKALVEG-PLNNLRESLMQFSKPRKLVNTVNPG 939
Query: 885 AESLTST 891
A +T+
Sbjct: 940 ARFMTTA 946
Score = 50.1 bits (118), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 469 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 521
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 522 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 569
>gi|251836854|pdb|2WJV|A Chain A, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2
gi|251836855|pdb|2WJV|B Chain B, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2
gi|251836858|pdb|2WJY|A Chain A, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2 Orthorhombic Form
Length = 800
Score = 148 bits (374), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 519 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 577
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 578 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 637
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 638 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 694
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 695 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 754
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 755 GVIIVGNPKAL-SKQPLWNHLL 775
Score = 50.8 bits (120), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 342 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 394
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 395 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 442
>gi|354473860|ref|XP_003499150.1| PREDICTED: regulator of nonsense transcripts 1-like [Cricetulus
griseus]
Length = 1061
Score = 148 bits (374), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 157/307 (51%), Gaps = 15/307 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 576 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 634
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 635 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 694
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 695 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 751
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 752 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 811
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKE-----LVEIG 884
+ I+G+ + L S + +W L+ K ++ NL ++ ++ SK V G
Sbjct: 812 GVIIVGNPKAL-SKQPLWNHLLSYYKEQKALVEG-PLNNLRESLMQFSKPRKLVNTVNPG 869
Query: 885 AESLTST 891
A +T+
Sbjct: 870 ARFMTTA 876
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 399 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 451
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 452 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 499
>gi|156838553|ref|XP_001642980.1| hypothetical protein Kpol_1046p14 [Vanderwaltozyma polyspora DSM
70294]
gi|156113564|gb|EDO15122.1| hypothetical protein Kpol_1046p14 [Vanderwaltozyma polyspora DSM
70294]
Length = 1115
Score = 148 bits (374), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 166/341 (48%), Gaps = 59/341 (17%)
Query: 556 TTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAG 615
+T + + D +A + F+T ++ IK L +++DE+ Q E+ + +PL L G
Sbjct: 773 STQQTTIADRYVSQAQIIFTTNIAAGGRQLKSIKELPVVIMDESTQSSEAATLVPLSLPG 832
Query: 616 INHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHS---KHLLNIQYRMHPSISL 672
+ V +GDE QL S S+ SLFER+ LN S H+L+ QYRMHPSIS
Sbjct: 833 LRTFVFVGDEKQL-----SSFSNVPQLEMSLFERVL-LNGSYKKPHMLDTQYRMHPSISK 886
Query: 673 FPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCR------- 725
FP FY ++ DG +K K + G ++ + F N GRE +++ R
Sbjct: 887 FPIKAFYNGELKDGVTIKDKEF-----PGIKYPLF-FYNCNKGREGKVFNKVRGSAGFTY 940
Query: 726 -NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ------------VVAIRK---- 768
NI E ++KIL KL + Q+ IG+++PY+AQ V+ K
Sbjct: 941 NNISEAREIVKILYKLI--LDKNVQRDEIGIITPYSAQRDLLSNLLVNDSVINPEKVEMF 998
Query: 769 ----KIGFEYENKDGFTVK--------------VKSIDGFQGGEEDIIIISTVRCNTGGS 810
+I G T++ V +ID FQG E+ II S VR N
Sbjct: 999 QDFDEIDLLNSKASGNTLEGPKVNTINIINGIFVSTIDSFQGHEKKFIIFSCVRNNPENK 1058
Query: 811 IGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
IGF+S +R+NVALTRA++ L I+G++ ++ + WG+ +
Sbjct: 1059 IGFVSDKRRMNVALTRAKNGLIIVGNKDVMLRGDKTWGSYI 1099
>gi|388852346|emb|CCF53961.1| probable NAM7-nonsense-mediated mRNA decay protein [Ustilago
hordei]
Length = 1091
Score = 148 bits (374), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 139/271 (51%), Gaps = 9/271 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DEA Q E E IPL + G V +GD QL ++ +K + AG +SLFERL L
Sbjct: 645 VLVDEATQAAEPEVMIPL-VMGCKQVVFVGDHLQLGPVIMNKKAARAGLSQSLFERLIML 703
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
+ L +QYRMHP +S FP+ FY + +G + E + + F
Sbjct: 704 GNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRREVDFPWPVPWLPMFFFQN 763
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
+G E S N E S V KI+ + +KA V Q IG+V+PY Q I +
Sbjct: 764 LGQEEISSSGTSFLNRTEASNVEKIVTRFFKAGVKPSQ---IGIVTPYEGQRSYIVNHMQ 820
Query: 772 FEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
K V+V S+D FQG E+D II+S VR N IGF+S P+R+NVALTRAR+
Sbjct: 821 LHGSLKKELYKQVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSDPRRLNVALTRARY 880
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCF 860
L ILG+ + L + +W L+ K + C
Sbjct: 881 GLVILGNPKVL-NKHPLWHYLLVHYKEKGCL 910
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ S + ++F LN SQV A+ + L++ + LI GPPGTGKT T
Sbjct: 461 EIESATLRTTMPKRFSAPGLPELNHSQVNAVKSVLQK-------PLSLIQGPPGTGKTVT 513
Query: 295 VSMLLLTLLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L ++ L C P+NVA+ +L ++ LK+V+ S K ++PI
Sbjct: 514 SATIVYQLSKMNPGAVLVCAPSNVAVDQLCEKIHLTGLKVVRLSAKSREALDSPI 568
>gi|74201543|dbj|BAE28409.1| unnamed protein product [Mus musculus]
Length = 1124
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 157/307 (51%), Gaps = 15/307 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 639 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 697
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 698 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 757
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 758 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 814
Query: 772 FEYE--NKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 815 FSGSLYTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 874
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKE-----LVEIG 884
+ I+G+ + L S + +W L+ K ++ NL ++ ++ SK V G
Sbjct: 875 GVIIVGNPKAL-SKQPLWNHLLSYYKEQKALVEG-PLNNLRESLMQFSKPRKLVNTVNPG 932
Query: 885 AESLTST 891
A +T+
Sbjct: 933 ARFMTTA 939
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ V K Q ++F LN SQV A+ L+R + LI GPPGTGKT T
Sbjct: 455 EVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVT 507
Query: 295 VSMLLLTLLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 508 SATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 562
>gi|410053595|ref|XP_512972.4| PREDICTED: regulator of nonsense transcripts 1 [Pan troglodytes]
Length = 1057
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 633 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 691
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 692 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 751
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 752 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 808
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 809 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 868
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 869 GVIIVGNPKAL-SKQPLWNHLL 889
Score = 49.7 bits (117), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 456 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 508
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 509 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 556
>gi|322701174|gb|EFY92925.1| Regulator of nonsense transcripts 1 [Metarhizium acridum CQMa 102]
Length = 1083
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/277 (36%), Positives = 149/277 (53%), Gaps = 21/277 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 611 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLIKL 669
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFG------TY 707
+ L QYRMHP +S FP+ FY + +G ++E++ +F
Sbjct: 670 QLAPIRLTTQYRMHPCLSEFPSNMFYDGSLQNGI-----THEQRLRKDVDFPWPIAETPM 724
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---V 763
F + +G E S N E S V K + + +KA V + IGV++PY Q +
Sbjct: 725 MFWSNLGNEEISTSGTSYLNRTEASNVEKTVTRFFKAGVKPSE---IGVITPYEGQRSYI 781
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
V + G Y+ + V+V S+D FQG E+D I++S VR N IGF+S P+R+NVA
Sbjct: 782 VTTMQNSG-TYKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRRLNVA 840
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
LTRA++ L ILG+ + L S +W L+ K R+CF
Sbjct: 841 LTRAKYGLVILGNPKVL-SKHELWHNLLVHFKDRKCF 876
Score = 51.6 bits (122), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 12/84 (14%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC-RTLACTPT 315
LN+SQV A+ + L++ + LI GPPGTGKT T + ++ L ++ + L C P+
Sbjct: 449 LNQSQVDAIKSVLQKP-------LSLIQGPPGTGKTVTSATIIYHLAKMSGNQVLVCAPS 501
Query: 316 NVAITELASRV----LKLVKESYK 335
NVA+ +L R+ LK+V+ + K
Sbjct: 502 NVAVDQLCERIHRTNLKVVRLTAK 525
>gi|401400080|ref|XP_003880707.1| putative ATP-dependent helicase [Neospora caninum Liverpool]
gi|325115118|emb|CBZ50674.1| putative ATP-dependent helicase [Neospora caninum Liverpool]
Length = 1394
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/260 (36%), Positives = 139/260 (53%), Gaps = 9/260 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE AQ E + IPL G + VLIGD QLP + S + G SL ER
Sbjct: 1012 VIIDEGAQAIEPSNLIPLAR-GCRNFVLIGDHKQLPPTILSPEAASRGLDVSLLERFVGS 1070
Query: 654 NHSK-HLLNIQYRMHPSISLFPNLQFYRNQILD-GANVKSKSYEKQYLTGTEFGTYSFIN 711
+ LL+ Q RMHPSI+ FPNLQFY +I + +++ + ++ ++
Sbjct: 1071 GIAPIQLLDEQRRMHPSIAYFPNLQFYDGKIQSRDVDDRNRPPVAGFRWPSQNSRVCLVD 1130
Query: 712 I----IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
I + G E S + E+ +I ILQ + A GS IGV++PY AQ +R
Sbjct: 1131 ISAAGLSGSEASQGTSKYSAAEIDPIIAILQSV--ANEGSVLPSQIGVLTPYDAQKARLR 1188
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
K I +E + ++V S+DGFQG E+D+II S VR N G IGF+ P+R+NV LTRA
Sbjct: 1189 KAINETFEPPACYQIEVDSVDGFQGKEKDLIIFSAVRSNARGEIGFLRDPRRMNVMLTRA 1248
Query: 828 RHCLWILGSERTLISSESIW 847
+ + ++G + TL + + W
Sbjct: 1249 KRGVIVVGDQLTLWNDATNW 1268
>gi|301123753|ref|XP_002909603.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262100365|gb|EEY58417.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 777
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 161/308 (52%), Gaps = 22/308 (7%)
Query: 567 FKRASLFFSTASSSYKLHSVEI-KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDE 625
K A + F T S + + E + + L+IDEAAQ E+ + IP + + VL+GD
Sbjct: 439 IKNAQIVFCTLSGAGSVAMCEFAQDFDALIIDEAAQAVEASTLIPFKFRP-HRVVLVGDH 497
Query: 626 CQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILD 685
QLPA V SK G+ RSL +RL LLN QYRMHP IS FP+ FY +++
Sbjct: 498 RQLPATVISKSLVSMGYDRSLQQRLVENGSPVLLLNQQYRMHPEISEFPSAYFYGGRLVQ 557
Query: 686 GANVKSKSYEKQYLTGTEFGTYSFINIIGGREDF-IYHSCRNIVEVSAVIKILQKLYKAW 744
N++ + + Y F F+++ G + S RN+ EV AVI+++++L +
Sbjct: 558 DDNMREWTTQ-DYHHDRAFKPLLFLDVQGAQTQVNGSTSLRNMSEVEAVIQLVRRLLTKF 616
Query: 745 VGSKQKVSIGVVSPYTAQVVAIRKKIG-FEYENKDGFTVKVKSIDGFQGGEEDIIIISTV 803
+ K IGV++PY Q+ +R +G E E ++V ++DGFQG E++III S V
Sbjct: 617 PRIEWKKRIGVIAPYKQQIYEVRGAVGKLEAEFDRHLGIEVNTVDGFQGREKEIIIYSCV 676
Query: 804 RCNTGGSI----------------GFISKPQRVNVALTRARHCLWILGSERTLISSESIW 847
R + GG F + +R+NVA+TRA+ LWI+G+ + L S + W
Sbjct: 677 RTSYGGRRKRKKRNRGNEDDDVLDAFWADERRMNVAITRAKSSLWIVGNSKLLNQSRA-W 735
Query: 848 GALVCDAK 855
AL+ K
Sbjct: 736 RALIQHTK 743
Score = 45.1 bits (105), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 45/106 (42%), Gaps = 42/106 (39%)
Query: 258 NESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL-------------- 303
N+SQV A+L CL G S V +I GPPGTGKTKT+ LL LL
Sbjct: 258 NDSQVLAILGCL-----GEDSRV-IIQGPPGTGKTKTILGLLSALLDGAGLATLQKTKGT 311
Query: 304 -RIKC---------------------RTLACTPTNVAITELASRVL 327
RI+ R L P+N A+ EL RVL
Sbjct: 312 TRIRVGASLQNARASAVSKTVAETSIRVLVAAPSNAAVDELVLRVL 357
>gi|326930440|ref|XP_003211355.1| PREDICTED: probable helicase senataxin-like [Meleagris gallopavo]
Length = 2717
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/291 (34%), Positives = 160/291 (54%), Gaps = 39/291 (13%)
Query: 588 IKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLF 647
+ P + +++DEA Q E E+ IPL + N VL+GD QLP ++S + E G+G+SL
Sbjct: 2203 LDPFSCVIVDEAGQSCEVETLIPL-IHRCNKLVLVGDPRQLPPTIKSIKAQEYGYGQSLM 2261
Query: 648 ERLTSLNHSKHL----------------LNIQYRMHPSISLFPNLQFYRNQILDGANVKS 691
RL +HL L +QYRMHP I LFP+ Y G +K+
Sbjct: 2262 ARL-----QRHLEDQVQNNLLRRLPVVQLTVQYRMHPDICLFPSSYVY------GRTLKT 2310
Query: 692 KSYEKQYLTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQ--KLYKAWVGS 747
++ +E F Y ++ GRE+ S N EV V++I++ K + +G
Sbjct: 2311 DKATEENRCSSEWPFQPYLVFDVGDGREERDKDSFSNPQEVKLVLEIIRTIKEKRKDLGL 2370
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT 807
++ IG+++PY+AQ I++++ ++N +V ++D FQG E+D II++ VR N+
Sbjct: 2371 RR---IGIITPYSAQKKKIQEELDRVFKNNSPG--EVDTVDAFQGREKDCIIVTCVRANS 2425
Query: 808 G-GSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
GSIGF++ QR+NV +TRAR L+ILG +TL+ ++ W L+ DA+ R
Sbjct: 2426 SKGSIGFLASLQRLNVTITRARFSLFILGRLKTLMENKD-WNELIQDAQRR 2475
Score = 46.6 bits (109), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKCRT---------------LACTPTNVAITELASRV 326
LI GPPGTGK+KT+ LL +L RT L C P+N A+ EL ++
Sbjct: 1993 LIHGPPGTGKSKTIVGLLSRVLSENTRTEKTSKKNARMKQSRFLVCAPSNAAVDELMKKI 2052
Query: 327 LKLVKESYKRDSRSNTPICPLGDILL 352
+ KE + P+ GDI L
Sbjct: 2053 IIAFKEKCQ---NKQEPLGNCGDIKL 2075
>gi|237843993|ref|XP_002371294.1| ATP-dependent helicase, putative [Toxoplasma gondii ME49]
gi|211968958|gb|EEB04154.1| ATP-dependent helicase, putative [Toxoplasma gondii ME49]
Length = 1419
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 139/263 (52%), Gaps = 15/263 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE AQ E + IPL G + VLIGD QLP + S + G SL ER
Sbjct: 1037 VIIDEGAQAIEPSNLIPL-AHGCRNFVLIGDHKQLPPTILSPEAAARGLDVSLLERFVGS 1095
Query: 654 NHSK-HLLNIQYRMHPSISLFPNLQFYRNQI----LDGANVKSKSYEKQYLTGTEFGTYS 708
+ LL+ Q RMHPSI+ FPNLQFY +I +D N + + ++
Sbjct: 1096 GIAPIQLLDEQRRMHPSIAYFPNLQFYDGKIQSRDVDDGN---RPPVAGFRWPSQHSRVC 1152
Query: 709 FINI----IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVV 764
++I + G E S N E+ +I ILQ + A GS IGV++PY AQ
Sbjct: 1153 LVDISAAGLSGSETSQGTSKYNAAEIDPIIAILQSV--ANEGSVLPSQIGVLTPYDAQKA 1210
Query: 765 AIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
+RK I + + ++V S+DGFQG E+D+II S VR N G IGF+ P+R+NV L
Sbjct: 1211 RLRKAINETFVPPACYQIEVDSVDGFQGKEKDLIIFSAVRSNARGEIGFLRDPRRMNVML 1270
Query: 825 TRARHCLWILGSERTLISSESIW 847
TRA+ + ++G + TL + ++ W
Sbjct: 1271 TRAKRGVIVVGDQLTLWNDKTNW 1293
>gi|407927468|gb|EKG20360.1| ATPase AAA+ type core [Macrophomina phaseolina MS6]
Length = 1086
Score = 148 bits (373), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/273 (36%), Positives = 148/273 (54%), Gaps = 13/273 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 600 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 658
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
+ L +QYRMHP +S FP+ FY + +G +S+ E + F +
Sbjct: 659 GCAPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTRESRMRKEVDFPWPVGDSPMMFWSN 718
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ----VVAIR 767
+G E S N E + V KI+ + +KA V + IG+++PY Q V +++
Sbjct: 719 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGV---KPQDIGIITPYEGQRSYVVQSMQ 775
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
F+ EN ++V S+D FQG E+D I++S VR N IGF+S P+R+NVALTRA
Sbjct: 776 ANGTFKKENYK--EIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRA 833
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCF 860
++ L ILG+ + L S +W L+ K R C
Sbjct: 834 KYGLVILGNPKVL-SKHPLWHYLLLHFKERNCL 865
Score = 56.2 bits (134), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q KF LN SQ+ A+ + L++ + LI GPPGTGKT T
Sbjct: 416 EVAAAPMKTQLPRKFSVPGLPELNGSQINAVKSVLQKP-------LSLIQGPPGTGKTVT 468
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L +I + L C P+NVA+ +L R+ LK V+ + K +P+
Sbjct: 469 SATIIYHLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPV 523
>gi|126030570|pdb|2GJK|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
gi|126030579|pdb|2GK6|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
gi|126030580|pdb|2GK6|B Chain B, Structural And Functional Insights Into The Human Upf1
Helicase Core
gi|126030581|pdb|2GK7|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
Length = 624
Score = 148 bits (373), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 343 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 401
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 402 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 461
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 462 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 518
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 519 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 578
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 579 GVIIVGNPKAL-SKQPLWNHLL 599
Score = 50.8 bits (120), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 166 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 218
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 219 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 266
>gi|355767117|gb|EHH62580.1| hypothetical protein EGM_20966 [Macaca fascicularis]
Length = 1041
Score = 148 bits (373), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 556 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 614
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 615 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 674
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 675 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 731
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 732 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 791
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 792 GVIIVGNPKAL-SKQPLWNHLL 812
Score = 43.9 bits (102), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 280 VELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACTPTNVAITELASRV----LKLVKESY 334
+ LI GPPGTGKT T + ++ L R L C P+N+A+ +L ++ LK+V+
Sbjct: 410 LSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCA 469
Query: 335 KRDSRSNTPI 344
K ++P+
Sbjct: 470 KSREAIDSPV 479
>gi|221483749|gb|EEE22061.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 1431
Score = 148 bits (373), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 139/263 (52%), Gaps = 15/263 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE AQ E + IPL G + VLIGD QLP + S + G SL ER
Sbjct: 1037 VIIDEGAQAIEPSNLIPL-AHGCRNFVLIGDHKQLPPTILSPEAAARGLDVSLLERFVGS 1095
Query: 654 NHSK-HLLNIQYRMHPSISLFPNLQFYRNQI----LDGANVKSKSYEKQYLTGTEFGTYS 708
+ LL+ Q RMHPSI+ FPNLQFY +I +D N + + ++
Sbjct: 1096 GIAPIQLLDEQRRMHPSIAYFPNLQFYDGKIQSRDVDDGN---RPPVAGFRWPSQHSRVC 1152
Query: 709 FINI----IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVV 764
++I + G E S N E+ +I ILQ + A GS IGV++PY AQ
Sbjct: 1153 LVDISAAGLSGSETSQGTSKYNAAEIDPIIAILQSV--ANEGSVLPSQIGVLTPYDAQKA 1210
Query: 765 AIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
+RK I + + ++V S+DGFQG E+D+II S VR N G IGF+ P+R+NV L
Sbjct: 1211 RLRKAINETFVPPACYQIEVDSVDGFQGKEKDLIIFSAVRSNARGEIGFLRDPRRMNVML 1270
Query: 825 TRARHCLWILGSERTLISSESIW 847
TRA+ + ++G + TL + ++ W
Sbjct: 1271 TRAKRGVIVVGDQLTLWNDKTNW 1293
>gi|327200471|pdb|2XZO|A Chain A, Upf1 Helicase - Rna Complex
gi|327200473|pdb|2XZP|A Chain A, Upf1 Helicase
Length = 623
Score = 147 bits (372), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 342 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 400
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 401 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 460
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 461 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 517
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 518 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 577
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 578 GVIIVGNPKAL-SKQPLWNHLL 598
Score = 50.8 bits (120), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 165 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 217
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 218 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 265
>gi|195435518|ref|XP_002065727.1| GK19858 [Drosophila willistoni]
gi|194161812|gb|EDW76713.1| GK19858 [Drosophila willistoni]
Length = 1890
Score = 147 bits (372), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 123/363 (33%), Positives = 186/363 (51%), Gaps = 53/363 (14%)
Query: 525 RYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDF-----CFKRASLFFSTASS 579
R QL Q+ +CL + D+LN P T + E+F C +R+++ +T SS
Sbjct: 1535 RLRQQLEQKEKQCLHIQ-------DQLN-PRLTQR---EEFDISLTCVRRSNIVCTTLSS 1583
Query: 580 SYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDE 639
KL S I + +IDEA Q E + +PL+ A +NH VL+GD QLPA V S+ + +
Sbjct: 1584 CVKL-SRFINYFDICIIDEATQCTEPWTLLPLRFA-VNHLVLVGDTQQLPATVISQKAQD 1641
Query: 640 AGFGRSLFERLTS-LNH------SKHL-------LNIQYRMHPSISLFPNLQFYRNQILD 685
G S+F+R+ LN S HL L++QYRMHP I +PN FY +Q++D
Sbjct: 1642 FGLANSMFDRVQRCLNDQLDKPGSSHLVHTKIFKLSMQYRMHPEICRWPNRYFYEDQLVD 1701
Query: 686 GANVKSKSYEKQYLTGTEFGTYSFINIIGGRED--FIYHSCRNIVEVSAVIKILQKLYKA 743
+ T + Y IN+ ++ S N E V +L ++ K
Sbjct: 1702 SPCALRR-------TQSPLIPYCVINLSFTQDTNCINSRSVSNNDEARFVANLLIEMDKH 1754
Query: 744 WVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTV 803
S +K G++SPY++Q A+ + I E + ++D +QG E+DII+IS
Sbjct: 1755 M--STKKYGYGLISPYSSQCYALSELIPAE------MKIIPTTVDSYQGTEKDIIVISNA 1806
Query: 804 RCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
R T G GF++ QR+NVALTRA+ CL I G+ L S + +W AL+ DA+ R +F+
Sbjct: 1807 R--TRG-CGFLTNYQRLNVALTRAKRCLIICGNFDDLQSVD-MWRALLNDARDRGVYFDL 1862
Query: 864 DEE 866
+ E
Sbjct: 1863 ERE 1865
>gi|164659902|ref|XP_001731075.1| hypothetical protein MGL_2074 [Malassezia globosa CBS 7966]
gi|159104973|gb|EDP43861.1| hypothetical protein MGL_2074 [Malassezia globosa CBS 7966]
Length = 1019
Score = 147 bits (372), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 121/361 (33%), Positives = 174/361 (48%), Gaps = 45/361 (12%)
Query: 504 ELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLE 563
EL L + G +RY Q+ QR E L D ++ CTT
Sbjct: 549 ELSHLIEQKRNNGELSTMEERRYRSQVFQREREIL----------DAADVICTTC----- 593
Query: 564 DFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIG 623
++S+ +LHS E + ++IDEA Q E E IP+ + G VL+G
Sbjct: 594 ------------SSSADRRLHSYEFQ---TVLIDEATQAVEPECLIPI-VRGCRQLVLVG 637
Query: 624 DECQL-PAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQ 682
D QL P ++ K++D AG SLFERL L L +QYRMHP++S FP+ FY
Sbjct: 638 DHKQLGPVVLNRKVAD-AGMNLSLFERLVLLGVKPRRLEVQYRMHPALSEFPSNMFYDGM 696
Query: 683 ILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYH--SCRNIVEVSAVIKILQKL 740
+ +G + + + G+E+ S N E S+V K++ L
Sbjct: 697 LQNGVSAHERLRRNVAIPWPVPNMPMMFYQNLGQEEISASGTSYLNRTEASSVEKLVTTL 756
Query: 741 YKAWVGSKQKVSIGVVSPYTAQ---VVAIRKKIGFEYENKDGF-TVKVKSIDGFQGGEED 796
KA V ++ IGVV+PY Q V+ + G KD + V+V S+D FQG E+D
Sbjct: 757 LKAGVAAEH---IGVVTPYEGQRNFVINYMQLHGSMM--KDAYRNVEVASVDAFQGREKD 811
Query: 797 IIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKA 856
II+S VR N+ IGF+S P+R+NVALTRAR L ++G+ R L + +W L+ K
Sbjct: 812 YIIVSCVRSNSSLGIGFLSDPRRLNVALTRARFGLILIGNPRILCKN-PLWYHLLVHFKD 870
Query: 857 R 857
R
Sbjct: 871 R 871
Score = 48.1 bits (113), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 12/80 (15%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPT 315
LN SQ+ A+ L S + LI GPPGTGKT T + L+ L+++K + L C P+
Sbjct: 447 LNYSQLTALKTVLT-------SPLSLIQGPPGTGKTVTSASLIYHLVQMKRGKILVCAPS 499
Query: 316 NVAITELASRV----LKLVK 331
NVA+ +L ++ LK+V+
Sbjct: 500 NVAVDQLTEKLHRTGLKVVR 519
>gi|440794946|gb|ELR16091.1| hypothetical protein ACA1_224920 [Acanthamoeba castellanii str.
Neff]
Length = 1615
Score = 147 bits (372), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 142/261 (54%), Gaps = 9/261 (3%)
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS 652
+++DE+ Q E S L + H VL+GD QLP V S + + G SLF R+ +
Sbjct: 501 IVILDESTQATEPASLCAL-VHNSQHVVLLGDHYQLPPTVTSPEAQQGGLSESLFARMIA 559
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ ++L IQYRMHP IS FP++ FY +I DG + +E +F+N+
Sbjct: 560 MGIEPYMLEIQYRMHPIISEFPSVHFYGGKIKDGIVAAQRPSPTGIAWPSEGNPIAFVNV 619
Query: 713 IG-GREDFIYHSCRNIVEVSAVIKILQKL-YKAWVGSKQKVSIGVVSPYTAQVVAIR--- 767
G ++ +S N E AV +++ ++ VG + IGV++PY QV +
Sbjct: 620 DGYEKQSTDGYSWFNSAEGEAVFQLVSAFDQRSDVGDVK--DIGVITPYNGQVKHLADLF 677
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ G +N+ + + S+DG+QG E+++II + VR N+ G +GF+ +R+NVALTRA
Sbjct: 678 SRRGGMNKNEKWHKLNINSVDGYQGREKEVIIFTAVRSNSRGDVGFLRDWRRLNVALTRA 737
Query: 828 RHCLWILGSERTLISSESIWG 848
R L ++G+ RTL S E WG
Sbjct: 738 RRGLLVVGNRRTLQSDEH-WG 757
>gi|1575536|gb|AAC50771.1| regulator of nonsense transcript stability [Homo sapiens]
Length = 1118
Score = 147 bits (372), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 151/289 (52%), Gaps = 10/289 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 633 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 691
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 692 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 751
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 752 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 808
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 809 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 868
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
+ I+G+ + L S + +W L+ K ++ NL ++ ++ SK
Sbjct: 869 GVIIVGNPKAL-SKQPLWNHLLIFYKEQKVLVEG-PLNNLRESLMQFSK 915
Score = 50.4 bits (119), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 456 KCQLPKRFTAQALPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 508
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 509 LARQDNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCPKSREAIDSPV 556
>gi|1885356|gb|AAC51140.1| homolog of yeast UPF1 [Homo sapiens]
Length = 1118
Score = 147 bits (372), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 633 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 691
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 692 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 751
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 752 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 808
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 809 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 868
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 869 GVIIVGNPKAL-SKQPLWNHLL 889
Score = 50.8 bits (120), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ V K Q ++F LN SQV A+ L+R + LI GPPGTGKT T
Sbjct: 449 EVEDVITKCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVT 501
Query: 295 VSMLLLTLLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 502 SATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 556
>gi|300176328|emb|CBK23639.2| unnamed protein product [Blastocystis hominis]
Length = 321
Score = 147 bits (372), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 155/298 (52%), Gaps = 13/298 (4%)
Query: 562 LEDFCFKRASLFFSTASSS--YKLHSVEIKP-LNFLVIDEAAQLKESESTIPLQLAGINH 618
LE + + +T SSS + + I P + LV+DEA Q E + IPL L
Sbjct: 26 LEGYLVNNYDIILTTLSSSGLSVISGIPIGPRYSALVVDEACQATEVSTLIPL-LINPQK 84
Query: 619 AVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRM-HPSISLFPNLQ 677
VLIGD QLPA V S +++ + SLFERL++ NH +LLN QYR HP+I FPN
Sbjct: 85 CVLIGDPKQLPATVISA-NNQNNYNLSLFERLSNNNHYSYLLNTQYRRCHPNIIAFPNQC 143
Query: 678 FYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGG----REDFIYHSCRNIVEVSAV 733
FY ++++G NV + Y Q+ F F N+ G ++D S N EV V
Sbjct: 144 FYDGKLMNGENVSGRGYSHQFYESDYFYPVVFYNLCGSNVSEKKDAFSKSYSNESEVRFV 203
Query: 734 IKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGG 793
+ + + S +S+ +++PY Q +I ++ N+ + V ++D FQG
Sbjct: 204 LNLYNTFLNLY-PSYSSMSVVILTPYKEQKSLFESRIA-QHPNELVRRLHVFTVDAFQGK 261
Query: 794 EEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
E D++ STVR + +GF+S +R+NV+ TR R L+++G+E L +S + W +
Sbjct: 262 EVDLVFYSTVRTGSAYGVGFVSDIRRMNVSFTRPRFGLFVVGNEAKLRTS-TYWNQFI 318
>gi|18375673|ref|NP_002902.2| regulator of nonsense transcripts 1 [Homo sapiens]
gi|2739355|gb|AAB94785.1| pNORF1 [Homo sapiens]
gi|3328175|gb|AAC26788.1| nonsense-mediated mRNA decay trans-acting factor [Homo sapiens]
gi|24981038|gb|AAH39817.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Homo
sapiens]
gi|119605145|gb|EAW84739.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Homo sapiens]
gi|119605146|gb|EAW84740.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Homo sapiens]
gi|119605148|gb|EAW84742.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Homo sapiens]
gi|383420499|gb|AFH33463.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|383420501|gb|AFH33464.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|387540714|gb|AFJ70984.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|410220482|gb|JAA07460.1| UPF1 regulator of nonsense transcripts homolog [Pan troglodytes]
gi|410307484|gb|JAA32342.1| UPF1 regulator of nonsense transcripts homolog [Pan troglodytes]
Length = 1118
Score = 147 bits (372), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 633 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 691
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 692 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 751
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 752 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 808
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 809 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 868
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 869 GVIIVGNPKAL-SKQPLWNHLL 889
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 456 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 508
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 509 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 556
>gi|402904861|ref|XP_003915257.1| PREDICTED: regulator of nonsense transcripts 1, partial [Papio
anubis]
Length = 1041
Score = 147 bits (372), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 556 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 614
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 615 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 674
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 675 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 731
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 732 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 791
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 792 GVIIVGNPKAL-SKQPLWNHLL 812
Score = 50.4 bits (119), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 379 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 431
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 432 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 479
>gi|384939998|gb|AFI33604.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|384940000|gb|AFI33605.1| regulator of nonsense transcripts 1 [Macaca mulatta]
Length = 1118
Score = 147 bits (372), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 633 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 691
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 692 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 751
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 752 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 808
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 809 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 868
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 869 GVIIVGNPKAL-SKQPLWNHLL 889
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 456 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 508
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 509 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 556
>gi|395847959|ref|XP_003796631.1| PREDICTED: regulator of nonsense transcripts 1 [Otolemur garnettii]
Length = 1118
Score = 147 bits (372), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 633 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 691
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 692 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 751
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 752 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 808
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 809 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 868
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 869 GVIIVGNPKAL-SKQPLWNHLL 889
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 456 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 508
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 509 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 556
>gi|363743891|ref|XP_418237.3| PREDICTED: regulator of nonsense transcripts 1 [Gallus gallus]
Length = 1096
Score = 147 bits (372), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 611 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 669
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 670 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 729
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 730 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 786
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 787 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 846
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 847 GVIIVGNPKAL-SKQPLWNHLL 867
Score = 50.4 bits (119), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 434 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 486
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 487 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 534
>gi|344283632|ref|XP_003413575.1| PREDICTED: regulator of nonsense transcripts 1-like [Loxodonta
africana]
Length = 1117
Score = 147 bits (372), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 632 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 690
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 691 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 750
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 751 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 807
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 808 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 867
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 868 GVIIVGNPKAL-SKQPLWNHLL 888
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 455 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 507
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 508 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 555
>gi|366987891|ref|XP_003673712.1| hypothetical protein NCAS_0A07730 [Naumovozyma castellii CBS 4309]
gi|342299575|emb|CCC67331.1| hypothetical protein NCAS_0A07730 [Naumovozyma castellii CBS 4309]
Length = 992
Score = 147 bits (372), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 146/272 (53%), Gaps = 11/272 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
++IDE+ Q E E IP+ + G +L+GD QL P ++E K D AG +SLFERL S
Sbjct: 579 VLIDESTQATEPECLIPI-IKGAKQVILVGDHQQLGPVILERKAGD-AGLKQSLFERLIS 636
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L H L +QYRM+P +S FP+ FY + +G ++ ++
Sbjct: 637 LGHIPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSTFPWPIHDVPMMFWA 696
Query: 713 IGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK-- 768
GRE+ + S N +E +I+ KL++ V +Q IGV++PY Q I +
Sbjct: 697 NYGREELSSNGTSYLNRIEAMNCERIITKLFRDGVKPEQ---IGVITPYEGQRAYILQYM 753
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
++ + + V+V S+D FQG E+D II+S VR N +IGF+ P+R+NV LTRA+
Sbjct: 754 QMNGSLDKEMYVKVEVASVDAFQGREKDYIILSCVRANDQQAIGFLRDPRRLNVGLTRAK 813
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCF 860
+ L ILG+ R+L S +W L+ + + C
Sbjct: 814 YGLVILGNPRSL-SKNILWNHLLLHFREKGCL 844
Score = 54.7 bits (130), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 13/90 (14%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRT 309
P F+ LN+SQ A+ L+R + LI GPPGTGKT T + ++ L +I K R
Sbjct: 414 PHFTQ-LNDSQSNAVQHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKERV 465
Query: 310 LACTPTNVAITELASRV----LKLVKESYK 335
L C P+NVA+ LA+++ LK+V+ + K
Sbjct: 466 LVCAPSNVAVDHLAAKLRDLGLKVVRLTAK 495
>gi|395513182|ref|XP_003760808.1| PREDICTED: regulator of nonsense transcripts 1 [Sarcophilus
harrisii]
Length = 1050
Score = 147 bits (372), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 565 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 623
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 624 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 683
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 684 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 740
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 741 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 800
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 801 GVIIVGNPKAL-SKQPLWNHLL 821
Score = 50.4 bits (119), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 388 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 440
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 441 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 488
>gi|380800401|gb|AFE72076.1| regulator of nonsense transcripts 1, partial [Macaca mulatta]
gi|380800403|gb|AFE72077.1| regulator of nonsense transcripts 1, partial [Macaca mulatta]
Length = 1064
Score = 147 bits (372), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 579 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 637
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 638 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 697
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 698 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 754
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 755 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 814
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 815 GVIIVGNPKAL-SKQPLWNHLL 835
Score = 50.4 bits (119), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 402 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 454
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 455 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 502
>gi|297476262|ref|XP_002688572.1| PREDICTED: regulator of nonsense transcripts 1 [Bos taurus]
gi|296486196|tpg|DAA28309.1| TPA: UPF1 regulator of nonsense transcripts homolog [Bos taurus]
Length = 1116
Score = 147 bits (372), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 631 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 689
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 690 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 749
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 750 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 806
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 807 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 866
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 867 GVIIVGNPKAL-SKQPLWNHLL 887
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 454 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 506
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 507 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 554
>gi|73986070|ref|XP_533868.2| PREDICTED: regulator of nonsense transcripts 1 [Canis lupus
familiaris]
Length = 1119
Score = 147 bits (372), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 634 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 692
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 693 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 752
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 753 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 809
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 810 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 869
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 870 GVIIVGNPKAL-SKQPLWNHLL 890
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 457 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 509
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 510 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 557
>gi|440789574|gb|ELR10880.1| putative DNA helicase [Acanthamoeba castellanii str. Neff]
Length = 1656
Score = 147 bits (372), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 142/261 (54%), Gaps = 9/261 (3%)
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS 652
+++DE+ Q E S L + H VL+GD QLP V S + + G SLF R+ +
Sbjct: 502 IVILDESTQATEPASLCAL-VHNSQHVVLLGDHYQLPPTVTSPEAQQGGLSESLFARMIA 560
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ ++L IQYRMHP IS FP++ FY +I DG + +E +F+N+
Sbjct: 561 MGIEPYMLEIQYRMHPIISEFPSVHFYGGKIKDGIVAAQRPSPTGIAWPSEGNPIAFVNV 620
Query: 713 IG-GREDFIYHSCRNIVEVSAVIKILQKL-YKAWVGSKQKVSIGVVSPYTAQVVAIR--- 767
G ++ +S N E AV +++ ++ VG + IGV++PY QV +
Sbjct: 621 DGYEKQSTDGYSWFNSAEGEAVFQLVSAFDQRSDVGDVK--DIGVITPYNGQVKHLADLF 678
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ G +N+ + + S+DG+QG E+++II + VR N+ G +GF+ +R+NVALTRA
Sbjct: 679 SRRGGMNKNEKWHKLNINSVDGYQGREKEVIIFTAVRSNSRGDVGFLRDWRRLNVALTRA 738
Query: 828 RHCLWILGSERTLISSESIWG 848
R L ++G+ RTL S E WG
Sbjct: 739 RRGLLVVGNRRTLQSDEH-WG 758
>gi|355703337|gb|EHH29828.1| hypothetical protein EGK_10343, partial [Macaca mulatta]
Length = 1053
Score = 147 bits (372), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 568 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 626
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 627 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 686
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 687 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 743
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 744 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 803
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 804 GVIIVGNPKAL-SKQPLWNHLL 824
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 391 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 443
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 444 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 491
>gi|334326682|ref|XP_003340788.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Monodelphis domestica]
Length = 1122
Score = 147 bits (372), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 637 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 695
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 696 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 755
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 756 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 812
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 813 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 872
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 873 GVIIVGNPKAL-SKQPLWNHLL 893
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 460 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 512
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 513 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 560
>gi|297276540|ref|XP_002808229.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Macaca mulatta]
Length = 1096
Score = 147 bits (372), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 611 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 669
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 670 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 729
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 730 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 786
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 787 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 846
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 847 GVIIVGNPKAL-SKQPLWNHLL 867
Score = 50.1 bits (118), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 434 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 486
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 487 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 534
>gi|17380291|sp|Q92900.2|RENT1_HUMAN RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=ATP-dependent helicase RENT1; AltName:
Full=Nonsense mRNA reducing factor 1; Short=NORF1;
AltName: Full=Up-frameshift suppressor 1 homolog;
Short=hUpf1
gi|119605144|gb|EAW84738.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Homo sapiens]
gi|119605147|gb|EAW84741.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Homo sapiens]
Length = 1129
Score = 147 bits (371), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 644 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 702
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 703 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 762
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 763 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 819
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 820 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 879
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 880 GVIIVGNPKAL-SKQPLWNHLL 900
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 467 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 519
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 520 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 567
>gi|344241326|gb|EGV97429.1| Regulator of nonsense transcripts 1 [Cricetulus griseus]
Length = 771
Score = 147 bits (371), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 162/310 (52%), Gaps = 21/310 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 286 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 344
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYSFI 710
L +QYRMHP++S FP+ FY + +G A+ K ++ Q+ + F
Sbjct: 345 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQW---PQPDKPMFF 401
Query: 711 NIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
+ G+E+ S N E + V KI KL KA Q IG+++PY Q + +
Sbjct: 402 YVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQ 458
Query: 769 KIGF--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTR 826
+ F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTR
Sbjct: 459 YMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTR 518
Query: 827 ARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKE-----LV 881
AR+ + I+G+ + L S + +W L+ K ++ NL ++ ++ SK V
Sbjct: 519 ARYGVIIVGNPKAL-SKQPLWNHLLSYYKEQKALVEGPLN-NLRESLMQFSKPRKLVNTV 576
Query: 882 EIGAESLTST 891
GA +T+
Sbjct: 577 NPGARFMTTA 586
Score = 50.1 bits (118), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ V K Q ++F LN SQV A+ L+R + LI GPPGTGKT T
Sbjct: 102 EVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRP-------LSLIQGPPGTGKTVT 154
Query: 295 VSMLLLTLLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 155 SATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 209
>gi|168274489|dbj|BAG09664.1| regulator of nonsense transcripts 1 [synthetic construct]
Length = 1129
Score = 147 bits (371), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 644 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 702
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 703 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 762
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 763 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 819
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 820 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 879
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 880 GVIIVGNPKAL-SKQPLWNHLL 900
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 467 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 519
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 520 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 567
>gi|384249658|gb|EIE23139.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 1148
Score = 147 bits (371), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 126/405 (31%), Positives = 180/405 (44%), Gaps = 23/405 (5%)
Query: 512 SVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRAS 571
S DE + K L LH RR + + LR + + + + A
Sbjct: 724 SCDEQAADRGKAKAKLDALHSRRRQLTAELRAATEEVQVGGQQVQQASRAVRAAVIREAE 783
Query: 572 LFFSTASSS----YKLHSVEIKPLNFLVIDEA----AQLKESESTIPLQ-LAGINHAVLI 622
T SS+ + + ++ + ++IDEA AQ E + IPLQ L VL+
Sbjct: 784 AVVCTLSSAGGELLAIQAGGLEAFDAVIIDEASTLAAQAVEPAALIPLQMLKPDGKVVLV 843
Query: 623 GDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQ 682
GD QLPA V S+ ++ AG RSLFERL + LL QYRMHP+IS +P+ FY
Sbjct: 844 GDPKQLPATVVSREAEAAGLSRSLFERLQQGGVAVSLLAEQYRMHPAISAWPSSFFYSGH 903
Query: 683 ILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCR-------NIVEVSAVIK 735
+ D V + + F ++F + G E S N EV
Sbjct: 904 LKDAPAVLGNARTAPFHRTPCFPPFAFFDCREGEESRGSGSGSGAAASLYNSTEVDLASS 963
Query: 736 ILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEE 795
+ L K K S+ V+S Y AQV A+ + +V+ +IDGFQG E
Sbjct: 964 LFTGLMKEH--GKALGSVAVLSSYKAQVTALCSHFQRVHGAAKMASVEFATIDGFQGREA 1021
Query: 796 DIIIISTVRCNT--GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCD 853
D++I S VR G +GF++ +R+NVALTRAR LW++G TL + W AL+
Sbjct: 1022 DVVIFSCVRARASDSGGLGFLADVRRMNVALTRARQSLWVIGRVSTLQGC-APWAALIKH 1080
Query: 854 AKARQCFFNADEERNLAKARLEVSKELVEIGAESLTSTSQGGKKE 898
A A+ C F A R + EL A ++T+ S KE
Sbjct: 1081 AAAKGCLFAA--LRPFEQLLRASHDELTADAARAMTARSSRQTKE 1123
>gi|426387932|ref|XP_004060416.1| PREDICTED: regulator of nonsense transcripts 1 [Gorilla gorilla
gorilla]
Length = 1055
Score = 147 bits (371), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 570 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 628
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 629 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 688
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 689 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 745
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 746 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 805
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 806 GVIIVGNPKAL-SKQPLWNHLL 826
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 393 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 445
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 446 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 493
>gi|281343547|gb|EFB19131.1| hypothetical protein PANDA_000565 [Ailuropoda melanoleuca]
Length = 1122
Score = 147 bits (371), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 637 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 695
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 696 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 755
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 756 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 812
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 813 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 872
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 873 GVIIVGNPKAL-SKQPLWNHLL 893
Score = 50.1 bits (118), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 460 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 512
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 513 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 560
>gi|397493981|ref|XP_003817874.1| PREDICTED: regulator of nonsense transcripts 1 [Pan paniscus]
Length = 1053
Score = 147 bits (371), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 568 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 626
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 627 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 686
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 687 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 743
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 744 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 803
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 804 GVIIVGNPKAL-SKQPLWNHLL 824
Score = 50.1 bits (118), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 391 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 443
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 444 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 491
>gi|444316488|ref|XP_004178901.1| hypothetical protein TBLA_0B05540 [Tetrapisispora blattae CBS 6284]
gi|387511941|emb|CCH59382.1| hypothetical protein TBLA_0B05540 [Tetrapisispora blattae CBS 6284]
Length = 1056
Score = 147 bits (371), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 147/272 (54%), Gaps = 11/272 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
++IDE+ Q E E IP+ + G +L+GD QL P ++E K D AG +SLFERL S
Sbjct: 640 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAGD-AGLKQSLFERLIS 697
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L H L +QYRM+P +S FP+ FY + +G + ++
Sbjct: 698 LGHVPIRLEVQYRMNPFLSEFPSNMFYEGSLQNGVTLDQRTVPTSTFPWPIHDVPMMFWA 757
Query: 713 IGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
GRE+ + S N +E +++ +L+K V +Q IGV++PY Q I + +
Sbjct: 758 NYGREEISANGTSYLNRIEAMNCERVITRLFKDGVKPEQ---IGVITPYEGQRAYILQYM 814
Query: 771 GFEYE-NKDGF-TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
+KD + V+V S+D FQG E+D II+S VR N +IGF+S P+R+NV LTRA+
Sbjct: 815 QMNGTLDKDLYINVEVASVDAFQGREKDYIILSCVRANEQQAIGFLSDPRRMNVGLTRAK 874
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCF 860
+ L +LG+ R+L S +W L+ + + C
Sbjct: 875 YGLVVLGNPRSL-SRNILWNHLLIHFRQKGCL 905
Score = 52.0 bits (123), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 13/90 (14%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC-RT 309
P F+ LN SQ A+ L++ + LI GPPGTGKT T + ++ L ++ R
Sbjct: 475 PKFAQ-LNSSQTNAVRNVLQK-------PLSLIQGPPGTGKTVTSATIIYHLSKLHSERI 526
Query: 310 LACTPTNVAITELASRV----LKLVKESYK 335
L C P+NVA+ LA+++ LK+V+ + K
Sbjct: 527 LVCAPSNVAVDHLATKLRDLGLKVVRLTAK 556
>gi|387017334|gb|AFJ50785.1| Regulator of nonsense transcripts 1-like [Crotalus adamanteus]
Length = 1131
Score = 147 bits (371), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 647 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 705
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 706 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 765
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 766 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 822
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 823 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 882
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 883 GVIIVGNPKAL-SKQPLWNHLL 903
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 470 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 522
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 523 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 570
>gi|388491656|gb|AFK33894.1| unknown [Lotus japonicus]
Length = 164
Score = 147 bits (371), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/135 (51%), Positives = 98/135 (72%), Gaps = 1/135 (0%)
Query: 747 SKQKVSIGVVSPYTAQVVAIRKKIGFEYENKD-GFTVKVKSIDGFQGGEEDIIIISTVRC 805
+++K+SIG++SPY +QV I++KI D F+V V+S+DGF+GGE+D+IIISTVR
Sbjct: 3 TRKKISIGIISPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFKGGEQDVIIISTVRS 62
Query: 806 NTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADE 865
N G +GF+S QR NVA+TRAR+ LWILG+ TL+SS+++W +V DAK R CF AD+
Sbjct: 63 NPSGKVGFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVVLDAKKRDCFHTADK 122
Query: 866 ERNLAKARLEVSKEL 880
+ LA+ +V EL
Sbjct: 123 DNKLARVIEDVVFEL 137
>gi|444726614|gb|ELW67138.1| Regulator of nonsense transcripts 1 [Tupaia chinensis]
Length = 1000
Score = 147 bits (371), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 591 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 649
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 650 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 709
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 710 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 766
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 767 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 826
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 827 GVIIVGNPKAL-SKQPLWNHLL 847
Score = 50.4 bits (119), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 414 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 466
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 467 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 514
>gi|40788920|dbj|BAA19664.2| KIAA0221 [Homo sapiens]
Length = 1151
Score = 147 bits (371), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 666 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 724
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 725 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 784
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 785 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 841
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 842 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 901
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 902 GVIIVGNPKAL-SKQPLWNHLL 922
Score = 50.1 bits (118), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 489 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 541
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 542 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 589
>gi|296233329|ref|XP_002761973.1| PREDICTED: regulator of nonsense transcripts 1, partial [Callithrix
jacchus]
Length = 1164
Score = 147 bits (371), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 679 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 737
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 738 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 797
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 798 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 854
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 855 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 914
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 915 GVIIVGNPKAL-SKQPLWNHLL 935
Score = 49.7 bits (117), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 502 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 554
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 555 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 602
>gi|449478203|ref|XP_002195542.2| PREDICTED: probable helicase senataxin [Taeniopygia guttata]
Length = 2162
Score = 147 bits (371), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 168/307 (54%), Gaps = 30/307 (9%)
Query: 588 IKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLF 647
+ P + +++DEA Q E E+ IPL + N VL+GD QLP V+S + + G+ +SL
Sbjct: 1835 LDPFSCVIVDEAGQSCEVETLIPL-IHRCNKLVLVGDPKQLPPTVKSIKAQQYGYDQSLM 1893
Query: 648 ERLT---------SLNHSKHL--LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK 696
RL ++ HS + L +QYRMHP I LFP+ Y G +K+ +
Sbjct: 1894 ARLQRHLEEQVQQNILHSLPVVQLTVQYRMHPDICLFPSNYVY------GRTLKTAKAIE 1947
Query: 697 QYLTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQ--KLYKAWVGSKQKVS 752
+ +E F Y ++ GRE+ S N EV V+++++ K + +G ++
Sbjct: 1948 ENRCSSEWPFQPYLIFDVADGREERDNDSYSNPREVKLVMELIRTIKEKRKDLGLRR--- 2004
Query: 753 IGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCN-TGGSI 811
IG+++PY+AQ I++++ ++N +V ++D FQG E+D II+S VR N T GSI
Sbjct: 2005 IGIITPYSAQKRKIQEQLDSVFKNNS--PGEVDTVDAFQGREKDCIIVSCVRANSTKGSI 2062
Query: 812 GFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAK 871
GF+S QR+NV +TRAR L+ILG +TL+ ++ W L+ DA+ R E+N K
Sbjct: 2063 GFLSSLQRLNVTITRARFSLFILGRLQTLMEDKN-WNHLIQDAQKRGAIIRTT-EKNYKK 2120
Query: 872 ARLEVSK 878
L + K
Sbjct: 2121 EALRILK 2127
Score = 47.4 bits (111), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 19/87 (21%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKCRT----------------LACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL +LR R+ L C P+N A+ EL +
Sbjct: 1622 LIHGPPGTGKSKTIVGLLSRVLRENTRSEKTAREKNSKIKPNRFLVCAPSNAAVDELMKK 1681
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE + P+ GDI L
Sbjct: 1682 IIIAFKEKCQ---NKQEPLGNCGDIKL 1705
>gi|417413396|gb|JAA53027.1| Putative dna replication helicase, partial [Desmodus rotundus]
Length = 1052
Score = 147 bits (371), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 567 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 625
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 626 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 685
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 686 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 742
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 743 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 802
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 803 GVIIVGNPKAL-SKQPLWNHLL 823
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 390 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 442
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 443 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 490
>gi|410950946|ref|XP_003982163.1| PREDICTED: regulator of nonsense transcripts 1 [Felis catus]
Length = 1055
Score = 147 bits (371), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 570 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 628
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 629 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 688
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 689 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 745
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 746 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 805
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 806 GVIIVGNPKAL-SKQPLWNHLL 826
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 393 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 445
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 446 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 493
>gi|254585189|ref|XP_002498162.1| ZYRO0G03740p [Zygosaccharomyces rouxii]
gi|238941056|emb|CAR29229.1| ZYRO0G03740p [Zygosaccharomyces rouxii]
Length = 944
Score = 147 bits (371), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 184/385 (47%), Gaps = 48/385 (12%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
++IDE+ Q E E IP+ + G +L+GD QL P ++E K D AG +SLFERL S
Sbjct: 566 VLIDESTQASEPECLIPI-VKGAIQVILVGDHQQLGPVILERKAGD-AGLKQSLFERLIS 623
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L H L +QYRM+P +S FP+ FY + +G ++ ++
Sbjct: 624 LGHVPLRLEVQYRMNPHLSEFPSNMFYEGSLQNGVTIEQRTVPNSTFPWPIHEVPMMFWA 683
Query: 713 IGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
GRE+ + S N +E +I+ +L+K V +Q IGV++PY Q I
Sbjct: 684 NYGREEISANGTSYLNRIEAMNCERIITRLFKDGVKPEQ---IGVITPYEGQRAYI---- 736
Query: 771 GFEYENKDG-------FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
+Y +G V+V S+D FQG E+D II+S VR N SIGF+S +R+NV
Sbjct: 737 -LQYMQMNGSLDTDLYVNVEVASVDAFQGREKDYIILSCVRANDQQSIGFLSDSRRMNVG 795
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEI 883
LTRA++ L ILG+ R L S+ +W L+ + + C +E S +++
Sbjct: 796 LTRAKYGLVILGNPRAL-STNVLWNNLLIHFREKGCL-------------VEGSLNNLQL 841
Query: 884 GAESLTSTSQGGKKEEFEFEFVKAFRSINLIHKV--LNSLGRFD-ELLMLENGSGNFMEA 940
LT Q K + +F F NL +V +S FD + LM G +
Sbjct: 842 CTVQLTRVRQHKKGRQDKFPF-------NLGPEVGEFSSSNDFDTQSLMSFGGQADTFND 894
Query: 941 ANMAVLEGDIFLATDLLQKAWNFRE 965
A E LA+ L +AWN +E
Sbjct: 895 VYAATNE----LASYLNNEAWNAKE 915
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 8/95 (8%)
Query: 247 EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI- 305
++F F + LN SQ A+ L+R + LI GPPGTGKT T + ++ L ++
Sbjct: 396 KEFSIPFFAPLNASQSHAVEHALQR-------PLSLIQGPPGTGKTVTSATIVYHLSKLH 448
Query: 306 KCRTLACTPTNVAITELASRVLKLVKESYKRDSRS 340
K R L C P+NVA+ LA+++ L + + +RS
Sbjct: 449 KDRILVCAPSNVAVDHLAAKLRMLGLKVVRLTARS 483
>gi|149639074|ref|XP_001514946.1| PREDICTED: regulator of nonsense transcripts 1 [Ornithorhynchus
anatinus]
Length = 1113
Score = 147 bits (371), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 630 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 688
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 689 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 748
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 749 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 805
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 806 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 865
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 866 GVIIVGNPKAL-SKQPLWNHLL 886
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 453 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 505
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 506 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 553
>gi|148223321|ref|NP_001085862.1| MGC80941 protein [Xenopus laevis]
gi|49116641|gb|AAH73441.1| MGC80941 protein [Xenopus laevis]
Length = 1098
Score = 147 bits (371), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 612 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 670
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 671 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 730
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 731 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 787
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 788 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 847
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 848 GVIIVGNPKAL-SKQPLWNHLL 868
Score = 50.1 bits (118), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 435 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 487
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 488 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 535
>gi|85101908|ref|XP_961233.1| ATP-dependent helicase NAM7 [Neurospora crassa OR74A]
gi|18202963|sp|Q9HEH1.1|RENT1_NEUCR RecName: Full=Regulator of nonsense transcripts 1 homolog
gi|11595520|emb|CAC18314.1| probable nonsense-mediated mRNA decay protein [Neurospora crassa]
gi|28922775|gb|EAA31997.1| ATP-dependent helicase NAM7 [Neurospora crassa OR74A]
Length = 1093
Score = 147 bits (371), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 146/272 (53%), Gaps = 11/272 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 618 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKL 676
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
+ L +QYRMHP +S FP+ FY + +G + + + F +
Sbjct: 677 QFTPIRLKVQYRMHPCLSEFPSNMFYEGSLQNGVTAAERLRKDVDFPWPVPETPMMFWSN 736
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRK 768
+G E S N E + V KI+ + +KA V + IGV++PY Q +V +
Sbjct: 737 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGV---KPADIGVITPYEGQRSYIVNTMQ 793
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
G ++ + V+V S+D FQG E+D I++S VR N IGF+S P+R+NVALTRA+
Sbjct: 794 NTG-TFKKESYREVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRRLNVALTRAK 852
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCF 860
+ L I+G+ + L E +W L+ K ++C
Sbjct: 853 YGLVIIGNPKVLCKHE-LWHHLLVHFKDKKCL 883
Score = 48.9 bits (115), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACTPT 315
LN SQ+ A+ L + + LI GPPGTGKT T + ++ L ++ + L C P+
Sbjct: 456 LNASQIAAIKQVLS-------NPLSLIQGPPGTGKTVTSATIIYHLAKMSNSQVLVCAPS 508
Query: 316 NVAITELASRV----LKLVKESYK 335
NVA+ +L R+ LK+V+ + K
Sbjct: 509 NVAVDQLCERIHRTGLKVVRLTAK 532
>gi|21410895|gb|AAH30916.1| Upf1 protein, partial [Mus musculus]
Length = 543
Score = 147 bits (371), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 161/310 (51%), Gaps = 21/310 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 58 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 116
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYSFI 710
L +QYRMHP++S FP+ FY + +G A+ K ++ Q+ + F
Sbjct: 117 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQW---PQPDKPMFF 173
Query: 711 NIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
+ G+E+ N E + V KI KL KA Q IG+++PY Q + +
Sbjct: 174 YVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQ 230
Query: 769 KIGF--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTR 826
+ F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTR
Sbjct: 231 YMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTR 290
Query: 827 ARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKE-----LV 881
AR+ + I+G+ + L S + +W L+ K ++ NL ++ ++ SK V
Sbjct: 291 ARYGVIIVGNPKAL-SKQPLWNHLLSYYKEQKALVEGPLN-NLRESLMQFSKPRKLVNTV 348
Query: 882 EIGAESLTST 891
GA +T+
Sbjct: 349 NPGARFMTTA 358
>gi|431922030|gb|ELK19203.1| Regulator of nonsense transcripts 1 [Pteropus alecto]
Length = 1087
Score = 147 bits (371), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 139/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 602 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 660
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 661 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAAERVKKGFDFQWPQPDKPMFFYVT 720
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 721 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 777
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 778 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 837
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 838 GVIIVGNPKAL-SKQPLWNHLL 858
Score = 49.7 bits (117), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 425 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQRP-------LSLIQGPPGTGKTVTSATIVYH 477
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 478 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 525
>gi|358412841|ref|XP_001789963.2| PREDICTED: regulator of nonsense transcripts 1 [Bos taurus]
Length = 1063
Score = 147 bits (371), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 578 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 636
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 637 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 696
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 697 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 753
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 754 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 813
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 814 GVIIVGNPKAL-SKQPLWNHLL 834
Score = 50.4 bits (119), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 401 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 453
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 454 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 501
>gi|255088141|ref|XP_002505993.1| predicted protein [Micromonas sp. RCC299]
gi|226521264|gb|ACO67251.1| predicted protein [Micromonas sp. RCC299]
Length = 812
Score = 147 bits (371), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/257 (37%), Positives = 136/257 (52%), Gaps = 20/257 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DE+ Q E E IPL + G V++GD CQL +V SK + AG G+S+FERL SL
Sbjct: 528 VLMDESTQATEPECLIPL-IMGAKQVVMVGDHCQLGPVVTSKKAARAGLGQSMFERLISL 586
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF------GTY 707
L +QYRMHP +S FP+ FY + +G + LT +F
Sbjct: 587 GVQPIRLQVQYRMHPCLSEFPSNAFYEGALQNGVAAADR-----LLTHVDFPWPNPTSPM 641
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
F ++ G E S N E + V K++ L +A V + IGVV+PY Q +
Sbjct: 642 MFWSMTGAEEISASGTSYLNRAEAAGVEKVVTHLLRAGVDPGR---IGVVTPYEGQRAYV 698
Query: 767 RK---KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
+ + G G V+V S+D FQG E+D II+S VR N IGF++ P+R+NVA
Sbjct: 699 SQHMTRAGVLATRLYG-EVEVASVDAFQGREKDFIILSCVRSNEKTGIGFLNDPRRLNVA 757
Query: 824 LTRARHCLWILGSERTL 840
+TRAR L ILG+ + L
Sbjct: 758 MTRARSGLVILGNPKVL 774
Score = 47.8 bits (112), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC-RTLACTPT 315
LN SQ A A L+R + LI GPPGTGKT T + ++ L + + + C P+
Sbjct: 364 LNHSQESAARAVLQR-------PLSLIQGPPGTGKTVTSATIVYQLAQQHLGQVIVCAPS 416
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
NVA+ +LA ++ L++V+ + + +P+
Sbjct: 417 NVAVDQLAEKIERTGLRVVRLAARSREHVASPV 449
>gi|224140843|ref|XP_002323788.1| predicted protein [Populus trichocarpa]
gi|222866790|gb|EEF03921.1| predicted protein [Populus trichocarpa]
Length = 565
Score = 147 bits (370), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 160/323 (49%), Gaps = 30/323 (9%)
Query: 561 VLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPL--------- 611
+LE+ ++L FS ++ KL+ + ++IDEAAQ E + +PL
Sbjct: 182 ILEESVIVFSTLSFSGSALFSKLN----HGFDVVIIDEAAQAVEPATLVPLVNGCKQVFL 237
Query: 612 ---------QLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNI 662
+L +++GD QLPA V S + + G+G SLFER + ++L +
Sbjct: 238 VSKIHTNIKRLLDNLTVLIVGDPVQLPATVISPTAGKFGYGTSLFERFQRAGYPVNMLKM 297
Query: 663 QYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK--QYLTGTEFGTYSFINIIGGREDFI 720
QYRMHP I FP+ +FY + D +++ ++ QY FG + F ++ G+E
Sbjct: 298 QYRMHPEIRSFPSSEFYAEALQDADDLERRTTRDWHQYHC---FGPFCFFDVHEGKESQP 354
Query: 721 YHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKD 778
S N+ EV V+ + KL + + ++SPY QV + + + +
Sbjct: 355 SGSGSWVNVDEVEFVLLLYHKLVTMYPELRSSSQFAIISPYRHQVKLFQDRFRDAFGQES 414
Query: 779 GFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSER 838
V ++++DGFQG E+D+ I S VR N IGF+S +R+NV +TRA+ + ++GS
Sbjct: 415 KKFVDIQTVDGFQGREKDVAIFSCVRSNDDRRIGFVSDARRMNVGITRAKSAVLVVGSAS 474
Query: 839 TLISSESIWGALVCDAKARQCFF 861
TL + E W LV A+ R F
Sbjct: 475 TLRNDEH-WNNLVESAEKRNVLF 496
>gi|224126379|ref|XP_002329539.1| predicted protein [Populus trichocarpa]
gi|222870248|gb|EEF07379.1| predicted protein [Populus trichocarpa]
Length = 1242
Score = 147 bits (370), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 146/281 (51%), Gaps = 29/281 (10%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G V +GD CQL ++ K + AG +SLFERL L
Sbjct: 648 VLIDESTQATEPECLIPLVL-GAKQVVFVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 706
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF-----GTYS 708
L +QYRMHP +S FP+ FY + +G V E+Q +G +F
Sbjct: 707 GVKPIRLQVQYRMHPCLSEFPSNNFYEGTLQNGVTVN----ERQS-SGIDFPWPVPNRPM 761
Query: 709 FINIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
F + G+E+ N E + V KI+ ++ V Q IGV++PY Q I
Sbjct: 762 FFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ---IGVITPYEGQRAYI 818
Query: 767 RKKIGFEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQR 819
Y +++G ++V S+D FQG E+D II+S VR N IGF++ P+R
Sbjct: 819 -----VNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRR 873
Query: 820 VNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
+NVALTRAR+ + ILG+ + L S + +W +L+ K +C
Sbjct: 874 LNVALTRARYGIVILGNPKVL-SKQPLWNSLLTHYKEHECL 913
Score = 51.6 bits (122), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 12/102 (11%)
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-K 306
+FG LN SQV A+ L++ + LI GPPGTGKT T + ++ + + +
Sbjct: 475 RFGAPGLPELNASQVLAVKNVLQKP-------ISLIQGPPGTGKTVTSAAIVYHMAKQGQ 527
Query: 307 CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ L C P+NVA+ +LA ++ LK+V+ K ++P+
Sbjct: 528 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 569
>gi|406864055|gb|EKD17101.1| RNA helicase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 1098
Score = 147 bits (370), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/253 (38%), Positives = 141/253 (55%), Gaps = 12/253 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 614 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVQL 672
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN-VKSKSYEKQYLTGTEFGTYSFINI 712
+ L++QYRMHP +S FP+ FY + +G V+ + + F +
Sbjct: 673 GQNPIRLDVQYRMHPCLSEFPSNMFYEGSLQNGVTMVQRIRCDVDFPWPVSDTPMMFWSN 732
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRK 768
+G E S N E S V KI+ + +KA V Q IGV++PY Q VV+ +
Sbjct: 733 LGNEEISASGTSYLNRTEASNVEKIVTRFFKAGV---QPADIGVITPYEGQRSYVVSSMQ 789
Query: 769 KIG-FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
G F+ EN ++V S+D FQG E+D I++S VR N IGF+S P+R+NVALTRA
Sbjct: 790 NTGTFKKENYK--EIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRA 847
Query: 828 RHCLWILGSERTL 840
++ L ILG+ + L
Sbjct: 848 KYGLVILGNPKVL 860
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q +KF LN SQ+ A+ + L++ + LI GPPGTGKT T
Sbjct: 430 EVAAAPMKIQMPKKFTVPGLPELNNSQINAVKSVLQKP-------LSLIQGPPGTGKTVT 482
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYK 335
+ ++ L ++ + L C P+NVA+ +L R+ LK+V+ + K
Sbjct: 483 SATVIYHLAKVNGGQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAK 528
>gi|403303596|ref|XP_003942412.1| PREDICTED: regulator of nonsense transcripts 1 [Saimiri boliviensis
boliviensis]
Length = 1257
Score = 147 bits (370), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 139/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 772 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 830
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 831 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 890
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 891 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 947
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 948 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 1007
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 1008 GVIIVGNPKAL-SKQPLWNHLL 1028
Score = 49.3 bits (116), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 595 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQRP-------LSLIQGPPGTGKTVTSATIVYH 647
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 648 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 695
>gi|330841718|ref|XP_003292839.1| hypothetical protein DICPUDRAFT_50668 [Dictyostelium purpureum]
gi|325076881|gb|EGC30633.1| hypothetical protein DICPUDRAFT_50668 [Dictyostelium purpureum]
Length = 938
Score = 147 bits (370), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 163/319 (51%), Gaps = 30/319 (9%)
Query: 560 LVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHA 619
++L++ +L FS +S K+ I + ++IDEAAQ E+ + IP+Q
Sbjct: 529 MILDEADIVATTLSFSGSSLLTKM----IGGFDIVIIDEAAQAVETSTLIPIQ-HQCKKV 583
Query: 620 VLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFY 679
VL+GD QLPA + S ++ + + +SLF+RL N H+L+ QYRMH I FP+ FY
Sbjct: 584 VLVGDPKQLPATIISPLAIQHSYDQSLFQRLQEKN-KPHMLDTQYRMHSIIRKFPSKHFY 642
Query: 680 RNQILDGANVKSKSYEKQYLTGTEFGTYSFINI-------IGGREDFIYHSCRNIVEVSA 732
+ + DG N+ S++ Y + G F ++ GG S N+ E+
Sbjct: 643 DDLLQDGPNIPSRA--AHYHSNPFLGPLVFYDLSWSVETKPGG------GSVCNMEEIKM 694
Query: 733 VIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQG 792
+ Q + K + IG++SPY QV+ +R+ ++N G V + ++DGFQG
Sbjct: 695 AYFLYQHIIKEYPEEDFSGRIGIISPYRQQVLQLREA----FKNYPG--VSIDTVDGFQG 748
Query: 793 GEEDIIIISTVRCNT--GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGAL 850
E +III S VR G IGF+S +R+NVALTR R L I+G+ + L S W L
Sbjct: 749 REREIIIFSCVRAPAEKGSGIGFLSDVRRMNVALTRPRCSLIIMGNVKAL-SVNKDWNDL 807
Query: 851 VCDAKARQCFFNADEERNL 869
+ A+ C +E ++
Sbjct: 808 IVHAQDLGCLVPVKQEPSI 826
>gi|194223788|ref|XP_001915294.1| PREDICTED: regulator of nonsense transcripts 1 [Equus caballus]
Length = 1079
Score = 147 bits (370), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 594 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 652
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 653 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 712
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 713 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 769
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 770 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 829
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 830 GVIIVGNPKAL-SKQPLWNHLL 850
Score = 49.7 bits (117), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 417 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 469
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 470 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 517
>gi|339251874|ref|XP_003371160.1| hypothetical protein Tsp_09417 [Trichinella spiralis]
gi|316968637|gb|EFV52895.1| hypothetical protein Tsp_09417 [Trichinella spiralis]
Length = 1030
Score = 147 bits (370), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 142/274 (51%), Gaps = 9/274 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IP+ + G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 584 VLIDESTQATEPECLIPI-MTGARQVILVGDHCQLGPVVMCKKAARAGLNQSLFERLVIL 642
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
+ L +QYRMHP +S P+ FY + +G + + E F
Sbjct: 643 GNRPIRLQVQYRMHPLLSSLPSNLFYEGTLQNGVTEQERILEGVDFRWPNPTVPMFFWCT 702
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKK-- 769
+E+ S N E + + KI K ++ + + Q IG+++PY Q I +
Sbjct: 703 ASQEEISSSGTSFLNRAEAAHIEKIATKFLRSGIRADQ---IGIITPYEGQRAYIVQHML 759
Query: 770 IGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+ NK ++V S+D FQG E+DII++S VR N IGF++ P+R+NVALTRAR+
Sbjct: 760 LSGPLNNKLYQEIEVASVDAFQGREKDIILLSCVRSNEHSGIGFLNDPRRLNVALTRARY 819
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
L I+G+ + L S + +W +L+ + C +
Sbjct: 820 GLIIVGNPKVL-SRQPMWHSLLRFCRENHCLLDG 852
Score = 44.3 bits (103), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACTPT 315
LN SQV A+ L R + LI GPPGTGKT T + ++ L + L C P+
Sbjct: 436 LNHSQVMAVREVLTR-------SISLIQGPPGTGKTVTSASIVYHLAKAGGTPILVCAPS 488
Query: 316 NVAITELASR 325
NVA+ + ++
Sbjct: 489 NVAVIRMCAK 498
>gi|343429606|emb|CBQ73179.1| related to SEN1 protein [Sporisorium reilianum SRZ2]
Length = 2239
Score = 147 bits (370), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 145/267 (54%), Gaps = 10/267 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDEAAQ E + IPL+ G +++GD QLP V S+ +++ G+ +SLF R+
Sbjct: 1725 VVIDEAAQAVELSTIIPLRY-GCKQCIMVGDPNQLPPTVISQEAEKLGYSQSLFVRMFER 1783
Query: 654 N-HSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKS---KSYEKQYLTGTEFGTYSF 709
+ + HLL+IQYRMHP IS+FP+ FY +++ DG N+ + + K L + F
Sbjct: 1784 SPQAVHLLSIQYRMHPEISVFPSKAFYDSKLQDGPNMAELTRQPWHKYEL----MRPFKF 1839
Query: 710 INIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKK 769
++ HS N E + + + ++L IGVV+ Y AQV +++
Sbjct: 1840 LSTKAPESPGRMHSIINKEEANVALALYERLRTDNPSENFDYRIGVVTMYKAQVFELKRT 1899
Query: 770 IGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFISKPQRVNVALTRAR 828
Y + ++DGFQG E+DIII+S VR SIGF+S +R+NVA+TRA+
Sbjct: 1900 FQQRYGLDIADRIDFNTVDGFQGQEKDIIILSCVRSAAEPRSIGFLSDRRRLNVAVTRAK 1959
Query: 829 HCLWILGSERTLISSESIWGALVCDAK 855
L+++G+ L + IW LV A+
Sbjct: 1960 SNLFVIGNAEHLRRGDPIWERLVATAE 1986
Score = 44.3 bits (103), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 37/89 (41%), Gaps = 25/89 (28%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTL-------------- 302
+NE Q A+L L G LI GPPGTGKTKT+ L+
Sbjct: 1475 VNEPQARAILGSL------ATEGFSLIQGPPGTGKTKTICALIGAFVSNRKGPSMSVQAG 1528
Query: 303 -----LRIKCRTLACTPTNVAITELASRV 326
L + L C P+N AI E+A R
Sbjct: 1529 QAQGKLGATKKILLCAPSNAAIDEVAKRA 1557
>gi|441628692|ref|XP_004089387.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 1
[Nomascus leucogenys]
Length = 1163
Score = 146 bits (369), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 139/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 678 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 736
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 737 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 796
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 797 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 853
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 854 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 913
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 914 GVIIVGNPKAL-SKQPLWNHLL 934
Score = 49.7 bits (117), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 501 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQRP-------LSLIQGPPGTGKTVTSATIVYH 553
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 554 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 601
>gi|365763806|gb|EHN05332.1| Nam7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 971
Score = 146 bits (369), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 149/272 (54%), Gaps = 11/272 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
++IDE+ Q E IP+ + G +L+GD QL P ++E K +D AG +SLFE+L S
Sbjct: 569 VLIDESTQASGPECLIPI-VKGAKQVILVGDHQQLGPVILERKAAD-AGLKQSLFEKLIS 626
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L H L +QYRM+P +S FP+ FY + +G ++ ++ G
Sbjct: 627 LGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWA 686
Query: 713 IGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
GRE+ + S N +E +I+ KL++ V +Q IGV++PY Q I + +
Sbjct: 687 NYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQ---IGVITPYEGQRAYILQYM 743
Query: 771 GFEYE-NKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
+KD + V+V S+D FQG E+D II+S VR N +IGF+ P+R+NV LTRA+
Sbjct: 744 QMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 803
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCF 860
+ L ILG+ R+L + ++W L+ + + C
Sbjct: 804 YGLVILGNPRSL-ARNTLWNHLLIHFREKGCL 834
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 15/117 (12%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRT 309
P+F+ LN SQ A+ L+R + LI GPPGTGKT T + ++ L +I K R
Sbjct: 404 PNFAQ-LNSSQSNAVSHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRI 455
Query: 310 LACTPTNVAITELASRV----LKLVKESYK--RDSRSNTPICPLGDILLFGNKDRLK 360
L C P+NVA+ LA+++ LK+V+ + K D S+ L +++ G K LK
Sbjct: 456 LVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLVGRGAKGELK 512
>gi|391341257|ref|XP_003744947.1| PREDICTED: regulator of nonsense transcripts 1-like [Metaseiulus
occidentalis]
Length = 1137
Score = 146 bits (369), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 99/280 (35%), Positives = 149/280 (53%), Gaps = 27/280 (9%)
Query: 581 YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEA 640
+K HS+ +IDE Q E E +P+ L G +L+GD CQL +V K + A
Sbjct: 602 FKFHSI--------LIDECMQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKGAARA 652
Query: 641 GFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLT 700
G +SLFERL L L +QYRMHPS+S FP+ FY + +G E++ L
Sbjct: 653 GLSQSLFERLVVLGIRPLRLEVQYRMHPSLSEFPSNFFYEGSLQNGVYA-----EERRLK 707
Query: 701 GTEF-----GTYSFINIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSI 753
G +F F G+E+ S N E + V KI+ + K+ V +Q I
Sbjct: 708 GVDFPFPQPDKPMFFYCCNGQEEIAASGTSYLNRTEAALVEKIVTRFLKSSVKPEQ---I 764
Query: 754 GVVSPYTAQVVAIRKKIGF--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSI 811
GV++PY Q + + + + +K ++V S+D FQG E+D+II+S VR N I
Sbjct: 765 GVITPYEGQRAFLVQYMQYSGSLHSKLYQDIEVASVDAFQGREKDLIIMSCVRSNEHQGI 824
Query: 812 GFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
GF++ P+R+NVALTRAR+ + I+G+ + L S + +W L+
Sbjct: 825 GFLNDPRRLNVALTRARYGIIIVGNPKVL-SKQPLWNHLL 863
Score = 50.1 bits (118), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 12/106 (11%)
Query: 244 QWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL 303
Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++ L
Sbjct: 427 QLPKQFSAPNLPELNRSQVYAVRHALQR-------PLSLIQGPPGTGKTVTSATIVYQLA 479
Query: 304 RI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ L C P+N+A+ +L ++ LK+V+ K N+P+
Sbjct: 480 KQGHGPVLVCAPSNIAVDQLTEKIHRTRLKVVRLCAKSREAINSPV 525
>gi|119183909|ref|XP_001242931.1| hypothetical protein CIMG_06827 [Coccidioides immitis RS]
Length = 1089
Score = 146 bits (369), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 148/276 (53%), Gaps = 19/276 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL + G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 599 VLIDESTQSSEPECMIPL-VMGCKQVVLVGDHLQLGPVIMNKKAAKAGLNQSLFERLVIL 657
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFG------TY 707
+ LN+QYRMHP +S FP+ FY + +G + + + L +F
Sbjct: 658 GCAPIRLNVQYRMHPCLSAFPSNMFYEGSLQNGV-----TSDDRLLKDVDFPWPVADKPM 712
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ--VV 764
F + +G E S N E + V KI+ + +KA V + +IG+++PY Q V
Sbjct: 713 MFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGV---KPSAIGIITPYEGQRSYV 769
Query: 765 AIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
++ Y+ + ++V S+D FQG E+D I++S VR N IGF+S P+R+NVAL
Sbjct: 770 VSSMQLNGTYKKEAYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVAL 829
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
TRA++ L ILG+ + L S +W L+ K C
Sbjct: 830 TRAKYGLVILGNPKVL-SKHPLWNYLLRHFKEGNCL 864
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q +KF LN SQ+ A+ A L++ + LI GPPGTGKT T
Sbjct: 415 EVAAGPMKTQLPKKFTAPGLPGLNPSQINAVKAVLQK-------PLSLIQGPPGTGKTVT 467
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L +I + L C P+NVA+ +L + LK V+ + K +P+
Sbjct: 468 SATVIYHLAKISGGQVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVESPV 522
>gi|303320095|ref|XP_003070047.1| nonsense transcript regulator, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240109733|gb|EER27902.1| nonsense transcript regulator, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320031876|gb|EFW13833.1| ATP-dependent helicase NAM7 [Coccidioides posadasii str. Silveira]
gi|392865836|gb|EAS31677.2| ATP-dependent helicase NAM7 [Coccidioides immitis RS]
Length = 1101
Score = 146 bits (369), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 148/276 (53%), Gaps = 19/276 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL + G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 611 VLIDESTQSSEPECMIPL-VMGCKQVVLVGDHLQLGPVIMNKKAAKAGLNQSLFERLVIL 669
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFG------TY 707
+ LN+QYRMHP +S FP+ FY + +G + + + L +F
Sbjct: 670 GCAPIRLNVQYRMHPCLSAFPSNMFYEGSLQNGV-----TSDDRLLKDVDFPWPVADKPM 724
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ--VV 764
F + +G E S N E + V KI+ + +KA V + +IG+++PY Q V
Sbjct: 725 MFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGV---KPSAIGIITPYEGQRSYV 781
Query: 765 AIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
++ Y+ + ++V S+D FQG E+D I++S VR N IGF+S P+R+NVAL
Sbjct: 782 VSSMQLNGTYKKEAYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVAL 841
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
TRA++ L ILG+ + L S +W L+ K C
Sbjct: 842 TRAKYGLVILGNPKVL-SKHPLWNYLLRHFKEGNCL 876
Score = 53.9 bits (128), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q +KF LN SQ+ A+ A L++ + LI GPPGTGKT T
Sbjct: 427 EVAAGPMKTQLPKKFTAPGLPGLNPSQINAVKAVLQKP-------LSLIQGPPGTGKTVT 479
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L +I + L C P+NVA+ +L + LK V+ + K +P+
Sbjct: 480 SATVIYHLAKISGGQVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVESPV 534
>gi|426230268|ref|XP_004009198.1| PREDICTED: regulator of nonsense transcripts 1 [Ovis aries]
Length = 1341
Score = 146 bits (369), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 139/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 822 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 880
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 881 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 940
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 941 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 997
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 998 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 1057
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 1058 GVIIVGNPKAL-SKQPLWNHLL 1078
Score = 48.9 bits (115), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 645 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQRP-------LSLIQGPPGTGKTVTSATIVYH 697
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 698 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSRKAIDSPV 745
>gi|47087327|ref|NP_998639.1| regulator of nonsense transcripts 1 [Danio rerio]
gi|28278858|gb|AAH45353.1| Upf1 regulator of nonsense transcripts homolog (yeast) [Danio
rerio]
gi|240248221|emb|CAX18770.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Danio
rerio]
Length = 1100
Score = 146 bits (369), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/265 (35%), Positives = 145/265 (54%), Gaps = 15/265 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 613 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 671
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYSFI 710
L +QYRMHP++S FP+ FY + +G A+ K ++ Q+ + F
Sbjct: 672 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRLKKGFDFQW---PQPDKPMFF 728
Query: 711 NIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
+ G+E+ S N E + V KI +L KA Q IG+++PY Q + +
Sbjct: 729 YVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQ---IGIITPYEGQRSYLVQ 785
Query: 769 KIGF--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTR 826
+ F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTR
Sbjct: 786 YMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTR 845
Query: 827 ARHCLWILGSERTLISSESIWGALV 851
AR+ + I+G+ + L S + +W L+
Sbjct: 846 ARYGVIIVGNPKAL-SKQPLWNHLL 869
Score = 50.1 bits (118), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 436 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 488
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 489 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 536
>gi|410924489|ref|XP_003975714.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Takifugu rubripes]
Length = 1111
Score = 146 bits (369), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 610 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 668
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 669 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 728
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI +L KA Q IG+++PY Q + + +
Sbjct: 729 QGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 785
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 786 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 845
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 846 GVIIVGNPKAL-SKQPLWNHLL 866
Score = 50.4 bits (119), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ V K Q ++F LN SQV A+ L+R + LI GPPGTGKT T
Sbjct: 426 EVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVT 478
Query: 295 VSMLLLTLLRIKC-RTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 479 SATIVYHLARQGSGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 533
>gi|395333828|gb|EJF66205.1| ATP dependent helicase [Dichomitus squalens LYAD-421 SS1]
Length = 1060
Score = 146 bits (369), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/295 (35%), Positives = 151/295 (51%), Gaps = 11/295 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E E IPL L G VL+GD QL ++ +K + AG +SLFERL L
Sbjct: 590 VLIDEATQAAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAARAGLTQSLFERLVVL 648
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
+ L +QYRMHP +S FP+ FY + +G + + T F
Sbjct: 649 GNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVPDTPMFFYQN 708
Query: 714 GGREDFIYHSCRNIV--EVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ I S + + S V KI+ K +K+ V Q IGV++PY Q I +
Sbjct: 709 LGQEE-ISSSGTSFLNRRASNVEKIVTKFFKSGVVPSQ---IGVITPYEGQRSYIVNYMQ 764
Query: 772 FEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K ++V S+D FQG E+D II+S VR N IGF++ P+R+NVALTRA++
Sbjct: 765 FNGSLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKY 824
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIG 884
+ ILG+ + L S +W L+ K + C NL + ++ SK +G
Sbjct: 825 GVVILGNPKVL-SKHPLWHYLLTHYKEKNCLVEG-PLNNLQPSMIQFSKPRRTLG 877
Score = 49.3 bits (116), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
+ Q ++F LN SQ+ A+ + L++ + LI GPPGTGKT T + ++
Sbjct: 413 RTQMPKRFSAPGLPELNHSQMYAVKSVLQK-------PLSLIQGPPGTGKTVTSASIVYH 465
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYK 335
L ++ + L C P+NVA+ +L ++ LK+V+ S K
Sbjct: 466 LAKMNPGQVLVCAPSNVAVDQLTEKIHATGLKVVRLSAK 504
>gi|348500490|ref|XP_003437806.1| PREDICTED: regulator of nonsense transcripts 1-like [Oreochromis
niloticus]
Length = 1109
Score = 146 bits (369), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 612 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 670
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 671 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 730
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI +L KA Q IG+++PY Q + + +
Sbjct: 731 QGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 787
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 788 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 847
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 848 GVIIVGNPKAL-SKQPLWNHLL 868
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ V K Q ++F LN SQV A+ L+R + LI GPPGTGKT T
Sbjct: 428 EVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVT 480
Query: 295 VSMLLLTLLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 481 SATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 535
>gi|384486429|gb|EIE78609.1| hypothetical protein RO3G_03313 [Rhizopus delemar RA 99-880]
Length = 1038
Score = 146 bits (369), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 143/274 (52%), Gaps = 9/274 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E E IPL L G AVL+GD QL ++ +K + AG +SLFERL L
Sbjct: 604 VLIDEATQASEPECMIPLVL-GCKQAVLVGDHQQLGPIIMNKKAARAGLCQSLFERLVIL 662
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + + + T
Sbjct: 663 GIRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGITTQERIRKDIDFPWPVLETPMMFYAN 722
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G E+ S N E S KI+ + K+ V Q IGVV+PY Q I + +
Sbjct: 723 LGNEEISTSGTSYLNRTEASNCEKIVTRFMKSGVMPSQ---IGVVTPYEGQRSYIVQYMQ 779
Query: 772 FEYE-NKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F KD + ++V S+D FQG E+D II+S VR N IGF+S P+R+NVALTRA++
Sbjct: 780 FNGSLRKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSDPRRLNVALTRAKY 839
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
+ ILG+ + ++S +W L+ K + C +
Sbjct: 840 GVVILGNPK-ILSRHPLWHHLLVHYKEKGCLVDG 872
Score = 55.5 bits (132), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ + L++ + LI GPPGTGKT T + ++
Sbjct: 427 KTQMPKRFSAPNLPELNHSQVYAVKSVLQK-------PLSLIQGPPGTGKTVTSASIVYH 479
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L ++ + L C P+NVA+ +LA ++ LK+V+ + K ++P+
Sbjct: 480 LAKMNPGQVLVCAPSNVAVDQLAEKIHQTGLKVVRVTAKSREELDSPV 527
>gi|410924491|ref|XP_003975715.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Takifugu rubripes]
Length = 1122
Score = 146 bits (369), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 621 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 679
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 680 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 739
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI +L KA Q IG+++PY Q + + +
Sbjct: 740 QGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 796
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 797 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 856
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 857 GVIIVGNPKAL-SKQPLWNHLL 877
Score = 50.4 bits (119), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ V K Q ++F LN SQV A+ L+R + LI GPPGTGKT T
Sbjct: 437 EVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVT 489
Query: 295 VSMLLLTLLRIKC-RTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 490 SATIVYHLARQGSGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 544
>gi|303278610|ref|XP_003058598.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459758|gb|EEH57053.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 826
Score = 146 bits (369), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/277 (35%), Positives = 144/277 (51%), Gaps = 12/277 (4%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
+ +VIDEAAQ E + +PL G L+GD QLPA V S + E + +SLF+R
Sbjct: 355 FDVVVIDEAAQAVEPSTLVPL-CYGAKQVFLVGDPRQLPATVLSSRATEYAYNQSLFKRF 413
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFI 710
+ H+L QYRMHP+I FP+ +FY+N++ DG +K+ + + + F + F+
Sbjct: 414 ERCGYPIHVLKTQYRMHPAIREFPSARFYQNELEDGPRQAAKT-SRPWHNVSLFRPFVFV 472
Query: 711 NIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+I G S N E A + I L + + IG++SPY AQV IRK +
Sbjct: 473 DIAGKEYLGGGTSWSNDEEAHAAVAIATALMRNYPQLATGEKIGIISPYKAQVRNIRKIL 532
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC---NTGGS------IGFISKPQRVN 821
+ V V SIDGFQG E+++ + S R + G +GF+S +R+N
Sbjct: 533 NDAIGEERSSRVDVNSIDGFQGREKEVCVFSVCRAPREDRGAKKKKTRRLGFVSDERRMN 592
Query: 822 VALTRARHCLWILGSERTL-ISSESIWGALVCDAKAR 857
V LTRAR L +LGS + L S + W ALV A+ R
Sbjct: 593 VGLTRARASLIVLGSGKALKASGDENWCALVNSARER 629
>gi|430813983|emb|CCJ28727.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1045
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 148/276 (53%), Gaps = 13/276 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E E IPL + G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 608 VLIDEATQATEPECMIPL-VMGCKQVVLVGDHQQLGPVIMNKKAAKAGLQQSLFERLVVL 666
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
S L +QYRMHP +S FP+ FY + +G + + + T ++
Sbjct: 667 GISPIRLTVQYRMHPCLSEFPSNMFYEGTLQNGVSKNERLRKNVDFPWPVNDTPMMFHMS 726
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRK 768
G+E+ S N E S KI+ K +KA V Q IG+++PY Q +V+ +
Sbjct: 727 LGQEEISSSGTSYLNRTEASNCEKIVVKFFKAGVKFSQ---IGIITPYEGQRSYIVSSMQ 783
Query: 769 KIGFEYENKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ G KD + ++V S+D FQG E+D II+S VR N IGF+S P+R+NVALTRA
Sbjct: 784 QSG--SLRKDLYKEIEVASVDAFQGREKDYIIVSCVRSNEHQGIGFLSDPRRLNVALTRA 841
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
++ + ILG+ + L S +W L+ K + C
Sbjct: 842 KYGVVILGNPKVL-SKHPLWYHLLLHYKEKNCLVEG 876
Score = 54.3 bits (129), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 12/111 (10%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ + L++ + LI GPPGTGKT T + ++
Sbjct: 431 KTQMPKRFSSPGLPELNVSQVYAVRSVLQK-------PLSLIQGPPGTGKTVTSATIVYH 483
Query: 302 LLRIKC-RTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPICPL 347
L ++ + L C P+NVA+ +L ++ LK+V+ S K +P+ L
Sbjct: 484 LAKMNSGQVLVCAPSNVAVDQLCKKIHQTGLKVVRVSAKSREDLESPVASL 534
>gi|348523131|ref|XP_003449077.1| PREDICTED: regulator of nonsense transcripts 1-like [Oreochromis
niloticus]
Length = 1101
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 156/292 (53%), Gaps = 16/292 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 615 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 673
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYSFI 710
L +QYRMHP++S FP+ FY + +G A+ K ++ Q+ + F
Sbjct: 674 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRIKKGFDFQW---PQPDKPMFF 730
Query: 711 NIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
+ G+E+ N E + V KI +L KA Q IG+++PY Q + +
Sbjct: 731 YVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQ---IGIITPYEGQRSYLVQ 787
Query: 769 KIGF--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTR 826
+ F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTR
Sbjct: 788 YMQFSGSLHTKLYQQVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTR 847
Query: 827 ARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
A++ + I+G+ + L S + +W L+ + K ++ NL ++ ++ SK
Sbjct: 848 AKYGVIIVGNPKAL-SKQPLWNNLLNNYKEQKVLVEG-PLNNLRESLMQFSK 897
Score = 49.7 bits (117), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ V K Q ++F LN SQV A+ L+R + LI GPPGTGKT T
Sbjct: 431 EVEDVTIKCQLPKRFTAPGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVT 483
Query: 295 VSMLLLTLLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L R L C P+N+A+ +L ++ LK+V+ K +P+
Sbjct: 484 SATIVYHLSRQGNGPVLVCAPSNIAVDQLTEKIDKTGLKVVRLCAKSREAIESPV 538
>gi|258570655|ref|XP_002544131.1| ATP-dependent helicase NAM7 [Uncinocarpus reesii 1704]
gi|237904401|gb|EEP78802.1| ATP-dependent helicase NAM7 [Uncinocarpus reesii 1704]
Length = 1075
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 149/276 (53%), Gaps = 19/276 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL + G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 585 VLIDESTQSSEPECMIPL-VMGCKQVVLVGDHLQLGPVIMNKKAAKAGLNQSLFERLVIL 643
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFG------TY 707
+ LN+QYRMHP +S FP+ FY + +G + + + L +F
Sbjct: 644 GCAPIRLNVQYRMHPCLSSFPSNMFYDGSLQNGV-----TSDDRLLKDVDFPWPISDKPM 698
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ--VV 764
F + +G E S N E + V KI+ + +KA V + +IG+++PY Q V
Sbjct: 699 MFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGV---KPSAIGIITPYEGQRSYV 755
Query: 765 AIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
++ Y+ + ++V S+D FQG E+D I++S VR N IGF+S P+R+NVAL
Sbjct: 756 VSSMQLNGTYKKEAYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVAL 815
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
TRA++ L ILG+ + L S +W L+ K + C
Sbjct: 816 TRAKYGLVILGNPKVL-SKHPLWNYLLRHFKEQDCL 850
Score = 53.9 bits (128), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q +KF LN SQV A+ A L++ + LI GPPGTGKT T
Sbjct: 401 EVAAAPMKTQLPKKFTAPGLPGLNPSQVNAVKAVLQK-------PLSLIQGPPGTGKTVT 453
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L ++ + L C P+NVA+ +L + LK V+ + K +P+
Sbjct: 454 SATVIYHLAKLTGGQVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVESPV 508
>gi|307207583|gb|EFN85248.1| Regulator of nonsense transcripts 1 [Harpegnathos saltator]
Length = 1108
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 142/262 (54%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 604 ILIDESMQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 662
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + K F +
Sbjct: 663 GIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPVQDKPMFFYVT 722
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E S V KI + + V S+Q IGV++PY Q + + +
Sbjct: 723 QGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVKSEQ---IGVITPYEGQRAFLVQHMQ 779
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ +K ++V S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA++
Sbjct: 780 YQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKY 839
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S +++W L+
Sbjct: 840 GIIIVGNPKVL-SKQALWNHLL 860
Score = 47.0 bits (110), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPT 315
LN SQV A+ ++R + LI GPPGTGKT T + ++ L++ L C P+
Sbjct: 442 LNRSQVYAVKHAVQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 494
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ K ++P+
Sbjct: 495 NTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPV 527
>gi|195492751|ref|XP_002094125.1| GE20371 [Drosophila yakuba]
gi|194180226|gb|EDW93837.1| GE20371 [Drosophila yakuba]
Length = 1699
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 180/358 (50%), Gaps = 45/358 (12%)
Query: 526 YLLQLHQRRSECLSVLRNLWNSLDELNLPCTT-SKLVLEDFCFKRASLFFSTASSSYKLH 584
YLLQ Q++ L ++ D+LN P T + + C RA++ +T SS KL
Sbjct: 1349 YLLQQLQQKERQLQLI------TDQLNPPLTQREEFEISQICVARANIICTTLSSCVKLA 1402
Query: 585 SVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGR 644
+ + + ++DEA Q E + +P++ G+ H VL+GD QLPA+V SK + + G
Sbjct: 1403 NY-VDFFDICIVDEATQCTEPWTLLPMRF-GLTHMVLVGDTQQLPAVVLSKKAIDFGLSN 1460
Query: 645 SLFERL-------------TSLNHSKHL-LNIQYRMHPSISLFPNLQFYRNQILDGANVK 690
S+F+R+ L H+K L++QYRMHP I +PN FY +Q+++
Sbjct: 1461 SMFDRIQRSLQTQLDKPGSNQLMHTKLFKLSMQYRMHPEICRWPNQYFYEDQLINA---- 1516
Query: 691 SKSYEKQYLTGTEFGTYSFINIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSK 748
E + Y IN+ +++ S N E V K+L ++ K
Sbjct: 1517 ----ECTARFASPLIPYCVINLKYTQDNSGAQNKSISNDEEARFVAKLLTEMDKHM--PS 1570
Query: 749 QKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG 808
Q+ S G++SPY Q A+ + I + +++D +QG E+D+IIIS R
Sbjct: 1571 QQFSYGLISPYQNQCYALSQVIPSH------MNLTPQTVDSYQGLEKDVIIISNARTR-- 1622
Query: 809 GSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEE 866
GF++ QR+NVALTR R CL I G+ L S E +W L+ DA++R+ +F+ + E
Sbjct: 1623 -GCGFLTNYQRLNVALTRPRRCLVICGNFDDLKSVE-MWRNLLDDARSRKVYFDMERE 1678
>gi|432854578|ref|XP_004067970.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Oryzias latipes]
Length = 1093
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 156/292 (53%), Gaps = 16/292 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 606 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 664
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYSFI 710
L +QYRMHP++S FP+ FY + +G A+ K ++ Q+ + F
Sbjct: 665 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRIKKGFDFQW---PQPDKPMFF 721
Query: 711 NIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
+ G+E+ N E + V KI +L KA Q IG+++PY Q + +
Sbjct: 722 YVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQ---IGIITPYEGQRSYLVQ 778
Query: 769 KIGF--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTR 826
+ F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTR
Sbjct: 779 YMQFSGSLHTKLYQQVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTR 838
Query: 827 ARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
A++ + I+G+ + L S + +W L+ + K ++ NL ++ ++ SK
Sbjct: 839 AKYGVIIVGNPKAL-SKQPLWNNLLNNYKEQKVLVEG-PLNNLRESLMQFSK 888
Score = 49.3 bits (116), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ V K Q ++F LN SQV A+ L+R + LI GPPGTGKT T
Sbjct: 422 EVEDVTIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVT 474
Query: 295 VSMLLLTLLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L R L C P+N+A+ +L ++ LK+V+ K +P+
Sbjct: 475 SATIVYHLSRQGNGPVLVCAPSNIAVDQLTEKIDKTGLKVVRLCAKSREAIESPV 529
>gi|312373027|gb|EFR20858.1| hypothetical protein AND_18385 [Anopheles darlingi]
Length = 1161
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 147/265 (55%), Gaps = 10/265 (3%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
N ++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL
Sbjct: 617 FNSILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 675
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFI 710
+L L +QYRMHP +S FP+ FY + +G + + + + F+
Sbjct: 676 VALGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCADERKLKVDFPWPSPDCPMFFL 735
Query: 711 NIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
+ G+E+ S N E S V KI + KA + +Q IG+++PY Q + +
Sbjct: 736 -VTQGQEEIAGSGTSYLNRTEASNVEKITTRFLKAGIKPEQ---IGIITPYEGQRAYLVQ 791
Query: 769 KIGFE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTR 826
+ ++ +K +++ S+D FQG E+DIII+S VR N IGF++ P+R+NVALTR
Sbjct: 792 YMQYQGSLHSKLYQEIEIASVDAFQGREKDIIIMSCVRANEHQGIGFLNDPRRLNVALTR 851
Query: 827 ARHCLWILGSERTLISSESIWGALV 851
A++ + I+G+ + L S + +W L+
Sbjct: 852 AKYGIIIVGNPKVL-SKQELWNHLL 875
Score = 48.1 bits (113), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRT-LACTPT 315
LN SQV A+ L+R + LI GPPGTGKT T + ++ L ++ L C P+
Sbjct: 458 LNRSQVYAVRHALQRP-------LSLIQGPPGTGKTVTSATIVYQLAKLNSGPILVCAPS 510
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ + ++P+
Sbjct: 511 NTAVDQLTEKIHRTNLKVVRVCARSREAIDSPV 543
>gi|402466738|gb|EJW02168.1| hypothetical protein EDEG_03389 [Edhazardia aedis USNM 41457]
Length = 1260
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 165/302 (54%), Gaps = 25/302 (8%)
Query: 569 RASLFFSTASSSYKLHSVEIK-PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQ 627
R+ + ST S+S + +E ++ ++IDEA Q E+ + IPL+ +L+GD Q
Sbjct: 967 RSDIICSTLSASAMENLIEDNLKIDMVIIDEACQCIETSALIPLKYNP-KKLILVGDPQQ 1025
Query: 628 LPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGA 687
LP V IS+ SLFERL+ + H+L QYRM I FPNLQFYRNQ++
Sbjct: 1026 LPPTV---ISNTRLLEISLFERLSRY-YPVHILKTQYRMTSDIVAFPNLQFYRNQLITPK 1081
Query: 688 NVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
++ + L + SFINI G + +S N+ E A+++I+ L +
Sbjct: 1082 FLEQRKGPFALL----LKSISFINIQGTEKQGDTNSFYNVKEEKAIVRIVNYLASKIHLN 1137
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYEN--KDGFT--VKVKSIDGFQGGEEDIIIISTV 803
K +IG++SPY Q++ I + EY K T V++ ++D FQG E+DIII+STV
Sbjct: 1138 K---NIGIISPYKKQILHIIE----EYRKICKANLTDLVEINTVDAFQGQEKDIIILSTV 1190
Query: 804 RCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
R +GF+ +R+NVALTRAR + ILG+ L+ ++ W AL+ K ++ F+
Sbjct: 1191 R---SEKLGFVLDIRRLNVALTRARFNIIILGNA-NLLETDKTWKALIQFYKDKKAFYEE 1246
Query: 864 DE 865
D+
Sbjct: 1247 DQ 1248
Score = 47.8 bits (112), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 18/93 (19%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC--------- 307
LN Q A+ +C ++ + LI GPPGTGKT T+ +L T+ C
Sbjct: 748 LNWYQAEAISSCF-----STKTQITLIQGPPGTGKTTTILGILQTIFSKICKFGYNNGRS 802
Query: 308 -RTLACTPTNVAITELASRV---LKLVKESYKR 336
+ L C P+N AI +A ++ LKL+ +S R
Sbjct: 803 PKVLICAPSNCAIDIIARKISKGLKLLDKSIFR 835
>gi|325093995|gb|EGC47305.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus H88]
Length = 1071
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/277 (36%), Positives = 151/277 (54%), Gaps = 21/277 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 584 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 642
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF------GTY 707
+ LN+QYRMHP +S FP+ FY + +G + ++ L +F
Sbjct: 643 GCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGV-----TESERLLKDVDFPWPVAHNPM 697
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---V 763
F + +G E S N E + V KI+ + +KA V + SIG+++PY Q V
Sbjct: 698 MFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGV---KPSSIGIITPYEGQRSYV 754
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
V+ + G ++ + ++V S+D FQG E+D I++S VR N IGF+S P+R+NVA
Sbjct: 755 VSSMQATG-TFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLNVA 813
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
LTRA++ L ILG+ + L S +W L+ K + C
Sbjct: 814 LTRAKYGLVILGNPKVL-SKHPLWNYLLLHFKEKNCL 849
Score = 54.7 bits (130), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + + Q +KF LN SQ A+ + L++ + LI GPPGTGKT T
Sbjct: 400 EVAAGPMRTQMPKKFSVQGLPDLNSSQTNAVKSVLQKP-------LSLIQGPPGTGKTVT 452
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L +I + L C P+NVA+ +L R+ LK V+ + K +P+
Sbjct: 453 SANIIYNLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPV 507
>gi|225558219|gb|EEH06503.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus G186AR]
gi|240277173|gb|EER40682.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus H143]
Length = 1071
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/277 (36%), Positives = 151/277 (54%), Gaps = 21/277 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 584 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 642
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF------GTY 707
+ LN+QYRMHP +S FP+ FY + +G + ++ L +F
Sbjct: 643 GCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGV-----TESERLLKDVDFPWPVAHNPM 697
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---V 763
F + +G E S N E + V KI+ + +KA V + SIG+++PY Q V
Sbjct: 698 MFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGV---KPSSIGIITPYEGQRSYV 754
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
V+ + G ++ + ++V S+D FQG E+D I++S VR N IGF+S P+R+NVA
Sbjct: 755 VSSMQATG-TFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLNVA 813
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
LTRA++ L ILG+ + L S +W L+ K + C
Sbjct: 814 LTRAKYGLVILGNPKVL-SKHPLWNYLLLHFKEKNCL 849
Score = 54.7 bits (130), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + + Q +KF LN SQ A+ + L++ + LI GPPGTGKT T
Sbjct: 400 EVAAGPMRTQMPKKFSVPGLPDLNSSQTNAVKSVLQKP-------LSLIQGPPGTGKTVT 452
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L +I + L C P+NVA+ +L R+ LK V+ + K +P+
Sbjct: 453 SANIIYNLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPV 507
>gi|225683333|gb|EEH21617.1| DNA-binding protein SMUBP-2 [Paracoccidioides brasiliensis Pb03]
Length = 1074
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 148/272 (54%), Gaps = 11/272 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 606 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 664
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK-QYLTGTEFGTYSFINI 712
+ LN+QYRMHP +S FP+ FY + +G + + + F +
Sbjct: 665 GCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLLKDVDFPWPVAHNPMMFWSN 724
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRK 768
+G E S N E + V KI+ + +KA V + SIG+++PY Q VV+ +
Sbjct: 725 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGV---KPSSIGIITPYEGQRSYVVSSMQ 781
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
G ++ + ++V S+D FQG E+D I++S VR N IGF+S P+R+NVALTRA+
Sbjct: 782 ATG-TFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLNVALTRAK 840
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCF 860
+ L ILG+ + L S +W L+ K + C
Sbjct: 841 YGLVILGNPKVL-SKHPLWNYLLLHFKEKNCL 871
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + + Q +KF LN SQ A+ + L++ + LI GPPGTGKT T
Sbjct: 422 EVAAGPMRTQMPKKFSVPGLPDLNSSQTNAVKSVLQK-------PLSLIQGPPGTGKTVT 474
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L +I + L C P+NVA+ +L R+ LK V+ + K +P+
Sbjct: 475 SANIIYHLAKINGGQVLVCAPSNVAVDQLCERIHKTGLKTVRVTAKSREDVESPV 529
>gi|226286939|gb|EEH42452.1| ATP-dependent helicase NAM7 [Paracoccidioides brasiliensis Pb18]
Length = 1087
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/277 (36%), Positives = 151/277 (54%), Gaps = 21/277 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 600 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 658
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF------GTY 707
+ LN+QYRMHP +S FP+ FY + +G + ++ L +F
Sbjct: 659 GCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGV-----TESERLLKDVDFPWPVAHNPM 713
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---V 763
F + +G E S N E + V KI+ + +KA V + SIG+++PY Q V
Sbjct: 714 MFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGV---KPSSIGIITPYEGQRSYV 770
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
V+ + G ++ + ++V S+D FQG E+D I++S VR N IGF+S P+R+NVA
Sbjct: 771 VSSMQATG-TFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLNVA 829
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
LTRA++ L ILG+ + L S +W L+ K + C
Sbjct: 830 LTRAKYGLVILGNPKVL-SKHPLWNYLLLHFKEKNCL 865
Score = 53.9 bits (128), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + + Q +KF LN SQ A+ + L++ + LI GPPGTGKT T
Sbjct: 416 EVAAGPMRTQMPKKFSVPGLPDLNSSQTNAVKSVLQKP-------LSLIQGPPGTGKTVT 468
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L +I + L C P+NVA+ +L R+ LK V+ + K +P+
Sbjct: 469 SANIIYHLAKINGGQVLVCAPSNVAVDQLCERIHKTGLKTVRVTAKSREDVESPV 523
>gi|121701377|ref|XP_001268953.1| regulator of nonsense transcripts, putative [Aspergillus clavatus
NRRL 1]
gi|119397096|gb|EAW07527.1| regulator of nonsense transcripts, putative [Aspergillus clavatus
NRRL 1]
Length = 1079
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 148/273 (54%), Gaps = 13/273 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 588 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 646
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
S LN+QYRMHP +S FP+ FY + +G + + + + F +
Sbjct: 647 GCSPIRLNVQYRMHPCLSQFPSNMFYEGSLQNGVSAIDRLRRDVDFPWPVVDSPMMFWSN 706
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ----VVAIR 767
+G E S N E + V KI+ + +KA V + IG+++PY Q V +++
Sbjct: 707 LGNEEISASGTSYLNRTEATNVEKIVTRFFKAGVHPQD---IGIITPYEGQRSYIVSSMQ 763
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
F+ E+ ++V S+D FQG E+D II+S VR N IGF+S P+R+NVALTRA
Sbjct: 764 ANGTFKKEHYK--EIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 821
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCF 860
++ L ILG+ + L S +W L+ K + C
Sbjct: 822 KYGLVILGNPKVL-SKHPLWNCLLQHFKEQHCL 853
Score = 58.2 bits (139), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q +KF LN SQ+ A+ + L+R + LI GPPGTGKT T
Sbjct: 404 EVAAAPMKTQLPKKFSVPGLPELNGSQINAVKSVLQRP-------MSLIQGPPGTGKTVT 456
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L +I + L C P+NVA+ +L R+ LK V+ + K +P+
Sbjct: 457 SATIIYHLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPV 511
>gi|154285820|ref|XP_001543705.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus NAm1]
gi|150407346|gb|EDN02887.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus NAm1]
Length = 1088
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/277 (36%), Positives = 151/277 (54%), Gaps = 21/277 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 601 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 659
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF------GTY 707
+ LN+QYRMHP +S FP+ FY + +G + ++ L +F
Sbjct: 660 GCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGV-----TESERLLKDVDFPWPVAHNPM 714
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---V 763
F + +G E S N E + V KI+ + +KA V + SIG+++PY Q V
Sbjct: 715 MFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGV---KPSSIGIITPYEGQRSYV 771
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
V+ + G ++ + ++V S+D FQG E+D I++S VR N IGF+S P+R+NVA
Sbjct: 772 VSSMQATG-TFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLNVA 830
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
LTRA++ L ILG+ + L S +W L+ K + C
Sbjct: 831 LTRAKYGLVILGNPKVL-SKHPLWNYLLLHFKEKNCL 866
Score = 54.3 bits (129), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + + Q +KF LN SQ A+ + L++ + LI GPPGTGKT T
Sbjct: 417 EVAAGPMRTQMPKKFSVPGLPDLNSSQTNAVKSVLQKP-------LSLIQGPPGTGKTVT 469
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L +I + L C P+NVA+ +L R+ LK V+ + K +P+
Sbjct: 470 SANIIYNLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPV 524
>gi|410921828|ref|XP_003974385.1| PREDICTED: regulator of nonsense transcripts 1-like [Takifugu
rubripes]
Length = 1099
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 152/289 (52%), Gaps = 10/289 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 614 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 672
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 673 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAGDRIKKGFDFQWPQPEKPMFFYVT 732
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI +L KA Q IG+++PY Q + + +
Sbjct: 733 QGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 789
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRA++
Sbjct: 790 FSGSLHTKLYQQVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAKY 849
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
+ I+G+ + L S + +W L+ + K ++ NL ++ ++ SK
Sbjct: 850 GVIIVGNPKAL-SKQPLWNNLLNNYKEQKVLVEG-PLNNLRESLMQFSK 896
Score = 50.1 bits (118), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ V K Q ++F + LN SQV A+ L+R + LI GPPGTGKT T
Sbjct: 430 EVEDVTIKCQLPKRFTANGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVT 482
Query: 295 VSMLLLTLLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L R L C P+N+A+ +L ++ LK+V+ K +P+
Sbjct: 483 SATIVYHLSRQGNGPVLVCAPSNIAVDQLTEKIDKTGLKVVRLCAKSREAIESPV 537
>gi|163915642|gb|AAI57562.1| LOC100135270 protein [Xenopus (Silurana) tropicalis]
Length = 587
Score = 145 bits (367), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/265 (35%), Positives = 144/265 (54%), Gaps = 15/265 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 101 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 159
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYSFI 710
L +QYRMHP++S FP+ FY + +G A+ K ++ Q+ + F
Sbjct: 160 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQW---PQPDKPMFF 216
Query: 711 NIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
+ G+E+ N E + V KI KL KA Q IG+++PY Q + +
Sbjct: 217 YVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQ 273
Query: 769 KIGF--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTR 826
+ F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTR
Sbjct: 274 YMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTR 333
Query: 827 ARHCLWILGSERTLISSESIWGALV 851
AR+ + I+G+ + L S + +W L+
Sbjct: 334 ARYGVIIVGNPKAL-SKQPLWNHLL 357
>gi|302766231|ref|XP_002966536.1| hypothetical protein SELMODRAFT_439557 [Selaginella moellendorffii]
gi|300165956|gb|EFJ32563.1| hypothetical protein SELMODRAFT_439557 [Selaginella moellendorffii]
Length = 1019
Score = 145 bits (367), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 142/273 (52%), Gaps = 19/273 (6%)
Query: 591 LNFLVIDEAAQLKESESTIPLQL--AGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
+ ++IDEAAQ E + IPLQL A +LIGD QLPA V S + F S+FE
Sbjct: 739 FDAVIIDEAAQAVEPSTLIPLQLLKATRGKCILIGDPKQLPATVLSVPASRLLFDCSMFE 798
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYS 708
R + YRMHP I FP+ +Y Q+ DG+ V + + F Y
Sbjct: 799 RFQKNGYP-------YRMHPEIRSFPSTHYYGGQLKDGSTVLHGNRSAPFHRERRFEPYR 851
Query: 709 FINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F +I G+E S N E + ++L+ L + + + IGV++PY Q ++
Sbjct: 852 FFDIRDGQERPGSMQSLTNPDEAEFIFQLLRVLKERYPEEVRPGRIGVITPYQEQRKVLQ 911
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGS---IGFISKPQRVNVAL 824
+ + + D V ++D FQG E DII++STVR + G S +GF++ +R+NVAL
Sbjct: 912 ENMRSLHSGID-----VNTVDSFQGREADIIVLSTVRASFGESQAGVGFLADVRRMNVAL 966
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKAR 857
TRA+ LW++G+ RTL S W AL+ D + R
Sbjct: 967 TRAKFSLWVVGNARTL-ERNSDWKALLQDCRRR 998
>gi|295657686|ref|XP_002789409.1| ATP-dependent helicase NAM7 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283831|gb|EEH39397.1| ATP-dependent helicase NAM7 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1087
Score = 145 bits (367), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/277 (36%), Positives = 151/277 (54%), Gaps = 21/277 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 600 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 658
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF------GTY 707
+ LN+QYRMHP +S FP+ FY + +G + ++ L +F
Sbjct: 659 GCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGV-----TESERLLKDVDFPWPVAHNPM 713
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---V 763
F + +G E S N E + V KI+ + +KA V + SIG+++PY Q V
Sbjct: 714 MFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGV---KPSSIGIITPYEGQRSYV 770
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
V+ + G ++ + ++V S+D FQG E+D I++S VR N IGF+S P+R+NVA
Sbjct: 771 VSSMQATG-TFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLNVA 829
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
LTRA++ L ILG+ + L S +W L+ K + C
Sbjct: 830 LTRAKYGLVILGNPKVL-SKHPLWNYLLLHFKEKNCL 865
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + + Q +KF LN SQ A+ + L++ + LI GPPGTGKT T
Sbjct: 416 EVAAGPMRTQMPKKFSVPGLPDLNSSQTNAVKSVLQKP-------LSLIQGPPGTGKTVT 468
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L +I + L C P+NVA+ +L R+ LK V+ + K +P+
Sbjct: 469 SANIIYHLAKINGGQVLVCAPSNVAVDQLCERIHKTGLKTVRVTAKSREDVESPV 523
>gi|392567037|gb|EIW60212.1| ATP dependent helicase, partial [Trametes versicolor FP-101664 SS1]
Length = 1084
Score = 145 bits (367), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 146/293 (49%), Gaps = 13/293 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E E IPL L G VL+GD QL ++ +K + AG +SLFERL L
Sbjct: 608 VLIDEATQAAEPECMIPLIL-GCKQVVLVGDHQQLGPVIMNKKAARAGLTQSLFERLVVL 666
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
+ L +QYRMHP +S FP+ FY + +G + + T F
Sbjct: 667 GNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVPDTPMFFYQN 726
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E S V KI+ K +K+ V Q IGV++PY Q I +
Sbjct: 727 LGQEEISSSGTSFLNRTEASNVEKIVTKFFKSGVVPSQ---IGVITPYEGQRSYIVNYMQ 783
Query: 772 FEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K ++V S+D FQG E+D II+S VR N IGF++ P+R+NVALTRA++
Sbjct: 784 FNGSLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKY 843
Query: 830 CLWILGSERTLIS----SESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
+ ILG+ + L +W L+ K + C NL + ++ SK
Sbjct: 844 GVVILGNPKVLSKLTRLQHPLWHYLLTHYKEKNCLVEGPLS-NLQPSMIQFSK 895
Score = 49.3 bits (116), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
+ Q ++F LN SQ+ A+ + L++ + LI GPPGTGKT T + ++
Sbjct: 431 RTQMPKRFSAPGLPELNHSQMFAVKSVLQK-------PLSLIQGPPGTGKTVTSASIVYH 483
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYK 335
L ++ + L C P+NVA+ +L ++ LK+V+ S K
Sbjct: 484 LAKMNPGQVLVCAPSNVAVDQLTEKIHATGLKVVRLSAK 522
>gi|261201590|ref|XP_002628009.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis SLH14081]
gi|239590106|gb|EEQ72687.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis SLH14081]
gi|239611816|gb|EEQ88803.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis ER-3]
gi|327352930|gb|EGE81787.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis ATCC 18188]
Length = 1092
Score = 145 bits (367), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/277 (36%), Positives = 151/277 (54%), Gaps = 21/277 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 605 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 663
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF------GTY 707
+ LN+QYRMHP +S FP+ FY + +G + ++ L +F
Sbjct: 664 GCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGV-----TESERLLKDVDFPWPVAHNPM 718
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---V 763
F + +G E S N E + V KI+ + +KA V + SIG+++PY Q V
Sbjct: 719 MFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGV---KPSSIGIITPYEGQRSYV 775
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
V+ + G ++ + ++V S+D FQG E+D I++S VR N IGF+S P+R+NVA
Sbjct: 776 VSSMQATG-TFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLNVA 834
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
LTRA++ L ILG+ + L S +W L+ K + C
Sbjct: 835 LTRAKYGLVILGNPKVL-SKHPLWNYLLLHFKEKNCL 870
Score = 54.3 bits (129), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + + Q +KF LN SQ A+ + L++ + LI GPPGTGKT T
Sbjct: 421 EVAAGPMRTQMPKKFSVPGLPDLNSSQTNAVKSVLQKP-------LSLIQGPPGTGKTVT 473
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L +I + L C P+NVA+ +L R+ LK V+ + K +P+
Sbjct: 474 SANIIYNLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPV 528
>gi|170053152|ref|XP_001862543.1| nonsense-mediated mRNA decay protein 1 [Culex quinquefasciatus]
gi|167873798|gb|EDS37181.1| nonsense-mediated mRNA decay protein 1 [Culex quinquefasciatus]
Length = 1136
Score = 145 bits (367), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 146/262 (55%), Gaps = 10/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 637 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 695
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + + + + + T F +
Sbjct: 696 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEERKLKVDFPWPSP-DTPMFFLVT 754
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E S V KI + KA V +Q IG+++PY Q + + +
Sbjct: 755 QGQEEIAGSGTSYLNRTEASNVEKITTRFLKAGVKPEQ---IGIITPYEGQRAYLVQYMQ 811
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ +K +++ S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA++
Sbjct: 812 YQGSLHSKLYQEIEIASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKY 871
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 872 GIIIVGNPKVL-SKQQLWNHLL 892
Score = 51.2 bits (121), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRT-LACTPT 315
LN SQV A+ L+R + LI GPPGTGKT T + ++ L+R+ L C P+
Sbjct: 475 LNRSQVYAVKHALQRP-------LSLIQGPPGTGKTVTSATIVYQLVRLNGGPILVCAPS 527
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ K ++P+
Sbjct: 528 NTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPV 560
>gi|296816783|ref|XP_002848728.1| ATP-dependent helicase NAM7 [Arthroderma otae CBS 113480]
gi|238839181|gb|EEQ28843.1| ATP-dependent helicase NAM7 [Arthroderma otae CBS 113480]
Length = 1088
Score = 145 bits (367), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 150/277 (54%), Gaps = 21/277 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G AVL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 596 VLIDESTQSAEPECMIPLVL-GCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 654
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFG------TY 707
+ LN+QYRMHP +S F + FY + +G S E + L +F
Sbjct: 655 GCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGV-----SSEDRLLKNVDFPWPVADKPM 709
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---V 763
F + +G E S N E + V KI+ + +KA V + IG+++PY Q V
Sbjct: 710 MFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGV---KPSGIGIITPYEGQRSYV 766
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
V+ + G ++ + ++V S+D FQG E+D I++S VR N IGF+S P+R+NVA
Sbjct: 767 VSSMQLTG-TFKKESYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVA 825
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
LTRA++ L ILG+ + L S +W L+ K + C
Sbjct: 826 LTRAKYGLVILGNPKVL-SKHPLWNYLLRHFKEQNCL 861
Score = 53.9 bits (128), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q ++F LN SQ+ A+ A L++ + LI GPPGTGKT T
Sbjct: 412 EVAAAPMKTQMPKQFSVPGLPGLNSSQINAVKAVLQKP-------LSLIQGPPGTGKTVT 464
Query: 295 VSMLLLTLLRIKC-RTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L ++ + L C P+NVA+ +L + LK V+ + K +P+
Sbjct: 465 SATIIYHLAKVNAGQVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVESPV 519
>gi|47216421|emb|CAG01972.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1123
Score = 145 bits (367), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/265 (35%), Positives = 144/265 (54%), Gaps = 15/265 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 612 ILIDESTQATEPECMVPAVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 670
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYSFI 710
L +QYRMHP++S FP+ FY + +G A+ K ++ Q+ + F
Sbjct: 671 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTSADRVKKGFDFQW---PQPDKPMFF 727
Query: 711 NIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
+ G+E+ S N E + V KI +L KA Q IG+++PY Q + +
Sbjct: 728 YVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQ---IGIITPYEGQRSYLVQ 784
Query: 769 KIGF--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTR 826
+ F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTR
Sbjct: 785 YMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTR 844
Query: 827 ARHCLWILGSERTLISSESIWGALV 851
AR+ + I+G+ + L S + +W L+
Sbjct: 845 ARYGVIIVGNPKAL-SKQPLWNHLL 868
Score = 50.1 bits (118), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ V K Q ++F LN SQV A+ L+R + LI GPPGTGKT T
Sbjct: 428 EVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVT 480
Query: 295 VSMLLLTLLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 481 SATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 535
>gi|403178280|ref|XP_003336719.2| hypothetical protein PGTG_17974 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164088|gb|EFP92300.2| hypothetical protein PGTG_17974 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1131
Score = 145 bits (367), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 153/292 (52%), Gaps = 16/292 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E E IPL L G+ V +GD QL + +K + AG +S+FERL L
Sbjct: 642 VLIDEATQATEPECMIPLTL-GVKQVVFVGDHQQLGPTIMNKKAARAGLTQSMFERLVLL 700
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
+ L +QYRMHP +S FP+ FY + +G + + + T +
Sbjct: 701 GNRPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTAPERIKKNVDFPWPQPTTPMCFHCN 760
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRK 768
G+E+ N E S V K++ + +KA V Q IG+V+PY Q +V +
Sbjct: 761 LGQEEISSSGTSFLNRTEASNVEKVVTRFFKAGVLPSQ---IGIVTPYEGQRSYIVTYMQ 817
Query: 769 KIGFEYEN--KDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTR 826
G ++ KD ++V S+D FQG E+D II+S VR N IGF++ P+R+NVALTR
Sbjct: 818 TNGTLKKDLYKD---IEVASVDAFQGREKDYIILSCVRSNDHQGIGFLNDPRRLNVALTR 874
Query: 827 ARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
A++ + +LG+ + L S ++W L+ K + C NL + +++SK
Sbjct: 875 AKYGVVVLGNPKVL-SKHALWHFLLTAYKEKSCLVEG-PLNNLQASLVQLSK 924
Score = 48.1 bits (113), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 12/80 (15%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACTPT 315
LN SQV A+ + L++ + L+ GPPGTGKT T + ++ L ++ + L C P+
Sbjct: 480 LNHSQVSAVKSVLQK-------PLSLVQGPPGTGKTVTSASVVYHLSKMNPGQVLVCAPS 532
Query: 316 NVAITELASRV----LKLVK 331
NVA+ +L ++ LK+V+
Sbjct: 533 NVAVDQLTEKIHLTGLKVVR 552
>gi|294881038|ref|XP_002769213.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
gi|239872491|gb|EER01931.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
Length = 2247
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 154/294 (52%), Gaps = 17/294 (5%)
Query: 567 FKRASLFFSTA---SSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIG 623
+ A + F T SS ++ + +IDEAAQ E S IPL+ +L+G
Sbjct: 1764 LRGADVLFGTLNSYGSSSVTRNLPVGRAEVCLIDEAAQAHEVASLIPLRF-DPQRLILVG 1822
Query: 624 DECQLPAMVES-KISDEAGFGRSLFERLTSLNHSKH-LLNIQYRMHPSISLFPNLQFYRN 681
D QLPA V S + S E RSLF++L + H +L QYRMHP+I+ FP+ FY
Sbjct: 1823 DPQQLPATVLSMRASLEYNLERSLFQKLQEASWPHHVMLTTQYRMHPAIAAFPSKHFYHG 1882
Query: 682 QILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLY 741
++ +V S+ ++ G +F ++ E N E + ++LQ+L
Sbjct: 1883 ALVPSNSVLSRPPFAPHMPGP----MTFFDLPDSEEVRRGVGRSNPAEALFIGRLLQELI 1938
Query: 742 KAWVGSKQKV----SIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDI 797
A +G K K +GV+SPY QV +++ + Y + ++V ++D FQG E+D+
Sbjct: 1939 SA-LGDKAKTLLPDGLGVISPYKQQVALLKRNL--SYGSLSDEWLEVGTVDSFQGREKDV 1995
Query: 798 IIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
I++STVR + IGF++ +R+NV++TRA+ LWI+G + L S + W LV
Sbjct: 1996 IVVSTVRSSASSGIGFVADMRRLNVSITRAKRALWIVGDSQRLSSGSTEWRDLV 2049
Score = 52.4 bits (124), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 16/137 (11%)
Query: 196 IYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSS 255
+ + +IL R W +L W + + V++ + ++G + PS S
Sbjct: 1526 VVVHSILAVSREWEAL-----WSIDSARKLLPIVLNPAKAAAAEAQEGSSEYLLTPSTSY 1580
Query: 256 TLNESQVGAML-ACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCR----TL 310
LNE Q A+ AC D R+ L+ GPPGTGKT+ V +L LLR + R L
Sbjct: 1581 ALNEGQSKALAYAC----DASKRA--VLLQGPPGTGKTRVVVAILQELLRRQTRRKFPIL 1634
Query: 311 ACTPTNVAITELASRVL 327
P+N A+ E+A+R+L
Sbjct: 1635 VSAPSNAAVDEIAARLL 1651
>gi|328768162|gb|EGF78209.1| hypothetical protein BATDEDRAFT_35814 [Batrachochytrium
dendrobatidis JAM81]
Length = 1119
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 142/276 (51%), Gaps = 19/276 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DEA Q E E IPL L G VL+GD QL +V+ K + +AG +SLFERL L
Sbjct: 645 VLVDEATQACEPECLIPLVL-GSKQVVLVGDHQQLGPVVQHKKASKAGLSQSLFERLIIL 703
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-------SYEKQYLTGTEFGT 706
L +QYRMHP +S FP+ FY + +G V+ + + +G+
Sbjct: 704 GLRPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTVQERIRPEIDFPWPVHETPMIFYGS 763
Query: 707 YSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
+ I + ++ N E + V K++ K KA V Q IG+V+PY Q +
Sbjct: 764 FGQEEIAASGKSYL-----NRTEAAYVEKVVTKFLKAGVTPAQ---IGIVTPYEGQRAYV 815
Query: 767 RKKIGFEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
+ + F K ++V S+D FQG E+D II++ VR N IGF+ P+R+NVAL
Sbjct: 816 VQHMQFNGSLKKELYKEIEVASVDSFQGREKDYIIVTCVRSNENQGIGFLVDPRRLNVAL 875
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
TRA++ L I+G+ + L + +W L+ + C
Sbjct: 876 TRAKYGLVIVGNPKVL-AKHPLWYQLLMTFREHSCL 910
Score = 50.4 bits (119), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACTPT 315
LN SQ A+ + L + + LI GPPGTGKT T + ++ L + K + L C P+
Sbjct: 483 LNHSQATAVKSVLSK-------PLSLIQGPPGTGKTVTSATIVYHLANMNKGQVLVCAPS 535
Query: 316 NVAITELASRV----LKLVKESYK 335
NVA+ L S++ LK+V+ + K
Sbjct: 536 NVAVDHLTSKIHKTGLKVVRVTAK 559
>gi|443896129|dbj|GAC73473.1| RNA helicase nonsense mRNA reducing factor [Pseudozyma antarctica
T-34]
Length = 1090
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 141/276 (51%), Gaps = 11/276 (3%)
Query: 591 LNF--LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
+NF +++DEA Q E E IPL + G V +GD QL ++ +K + AG +SLFE
Sbjct: 642 INFRTVLVDEATQAAEPECMIPL-VMGCKQVVFVGDHLQLGPVIMNKKAARAGLSQSLFE 700
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK-QYLTGTEFGTY 707
RL L + L IQYRMHP +S FP+ FY + +G + + K +
Sbjct: 701 RLIMLGNRPIRLEIQYRMHPCLSEFPSNMFYEGTLQNGITAQERLRAKVDFPWPVPSLPM 760
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
F +G E S N E S V KI+ + +KA V Q IG+V+PY Q I
Sbjct: 761 MFFQNLGQEEISSSGTSFLNRTEASNVEKIVTRFFKAGVEPWQ---IGIVTPYEGQRSYI 817
Query: 767 RKKIGFEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
+ K V+V S+D FQG E+D II+S VR N IGF+S P+R+NVAL
Sbjct: 818 VNHMQLHGSLKKELYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSDPRRLNVAL 877
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
TRAR L ILG+ + L + +W L+ K + C
Sbjct: 878 TRARFGLVILGNPKVL-NKHPLWHYLLVHYKEKGCL 912
Score = 51.2 bits (121), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
Query: 247 EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI- 305
++F LN SQV A+ + L++ + LI GPPGTGKT T + ++ L ++
Sbjct: 475 KRFSAPGLPELNHSQVNAVKSVLKK-------PLSLIQGPPGTGKTVTSASIVYQLSKMN 527
Query: 306 KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L C P+NVA+ +L ++ LK+V+ + K ++PI
Sbjct: 528 PGPVLVCAPSNVAVDQLTEKIHATGLKVVRLTAKSREALDSPI 570
>gi|157130590|ref|XP_001661931.1| nonsense-mediated mrna decay protein 1 (rent1) [Aedes aegypti]
gi|108871854|gb|EAT36079.1| AAEL011817-PA [Aedes aegypti]
Length = 1121
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 145/262 (55%), Gaps = 10/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 625 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 683
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + + + + + T F +
Sbjct: 684 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEERKLKVDFPWPSP-DTPMFFLVT 742
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E S V KI + KA V Q IG+++PY Q + + +
Sbjct: 743 QGQEEIAGSGTSYLNRTEASNVEKITTRFLKAGVKPDQ---IGIITPYEGQRAYLVQYMQ 799
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ +K +++ S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA++
Sbjct: 800 YQGSLHSKLYQEIEIASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKY 859
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 860 GIIIVGNPKVL-SKQQLWNHLL 880
Score = 50.4 bits (119), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPT 315
LN SQV A+ L+R + LI GPPGTGKT T + ++ L+R+ L C P+
Sbjct: 463 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVRLNGGPVLVCAPS 515
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ K +P+
Sbjct: 516 NTAVDQLTEKIHRTSLKVVRVCAKSREAIESPV 548
>gi|406607433|emb|CCH41224.1| ATP-dependent helicase NAM7 [Wickerhamomyces ciferrii]
Length = 1038
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/333 (32%), Positives = 166/333 (49%), Gaps = 18/333 (5%)
Query: 538 LSVLRNLWNSLDELNLPCTTSKLVL----EDFCFKRASLFFST--ASSSYKLHSVEIKPL 591
L L L N L EL+ T + L E K+A + +T + +L +V + +
Sbjct: 551 LKKLLRLRNELGELSAEDTKTYFTLLRKKEKSILKQADVVCATCVGAGDRRLENVNFRTI 610
Query: 592 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT 651
+IDE+ Q E E IPL + G +L+GD QL ++ K + +AG +SLFERL
Sbjct: 611 ---LIDESTQASEPECLIPL-VHGAKQVILVGDHQQLGPVILDKKAGDAGLKQSLFERLV 666
Query: 652 SLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
L H L +QYRM+P +S F + FY + +G + + T
Sbjct: 667 VLGHVPIRLEVQYRMNPCLSEFSSNMFYDGSLQNGVTKEQRQLPNSAFPWPVVDTPMMFW 726
Query: 712 IIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKK 769
GRE+ N +E +I+ +L++ V +Q IGV++PY Q + +
Sbjct: 727 ANFGREEISGSGTSFLNRIEAMNCERIITRLFRDGVQPEQ---IGVITPYEGQRAYVVQY 783
Query: 770 IGFEYE-NKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ +KD + V+V S+D FQG E+D II+S VR N +IGF+S P+R+NVALTRA
Sbjct: 784 MQMNGSMDKDLYMDVEVASVDAFQGREKDFIILSCVRANDQQNIGFLSDPRRLNVALTRA 843
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCF 860
++ + ILG+ R L S +W L+ + + C
Sbjct: 844 KYGVVILGNPRAL-SKNQLWNQLLLHYREKGCL 875
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 15/117 (12%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRT 309
P F+ LN SQ A+ L++ + LI GPPGTGKT T + ++ L + K R
Sbjct: 444 PGFAE-LNVSQASAVKNVLQK-------PLSLIQGPPGTGKTVTSATIIHHLTNLNKDRI 495
Query: 310 LACTPTNVAITELASRV----LKLVKESYK--RDSRSNTPICPLGDILLFGNKDRLK 360
L C P+NVA+ LAS++ LK+++ + K D S+ L +I+ K +LK
Sbjct: 496 LVCAPSNVAVDHLASKLDQLGLKVIRLTAKSREDVESSVQHLSLSNIIQKSAKGQLK 552
>gi|302422300|ref|XP_003008980.1| ATP-dependent helicase NAM7 [Verticillium albo-atrum VaMs.102]
gi|261352126|gb|EEY14554.1| ATP-dependent helicase NAM7 [Verticillium albo-atrum VaMs.102]
Length = 1041
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/277 (35%), Positives = 149/277 (53%), Gaps = 21/277 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL +L
Sbjct: 582 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVNL 640
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFG------TY 707
LN QYRMHP +S FP+ FY + +G ++ ++ +F
Sbjct: 641 RLQPIRLNTQYRMHPCLSEFPSNMFYDGSLQNGV-----THAQRLRRDVDFPWPVADTPM 695
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---V 763
F + +G E S N E S V K++ + +KA V + IGV++PY Q +
Sbjct: 696 MFWSNLGNEEISASGTSYLNRTEASNVEKVVTRFFKAGVKPQD---IGVITPYEGQRSYI 752
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
V+ + G ++ + V+V S+D FQG E+D I++S VR + IGF+S P+R+NV
Sbjct: 753 VSTMQNTG-TFKKESYKEVEVASVDAFQGREKDFIVLSCVRSSDNQGIGFLSDPRRLNVG 811
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
LTRA++ L ILG+ + L S +W L+ K R+C
Sbjct: 812 LTRAKYGLVILGNPKVL-SKHELWHHLLVHFKDRKCL 847
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 20/122 (16%)
Query: 219 VITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRS 278
++ ++LG D V K +KF LN+SQ+ A+ A L+ +
Sbjct: 390 IVHKLLGRDVAV--------APMKTAMPKKFTAPGLPDLNQSQISAIKAVLQ-------T 434
Query: 279 GVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKES 333
+ LI GPPGTGKT T + ++ L + + L C P+NVA+ +L R+ LK+V+ +
Sbjct: 435 PLSLIQGPPGTGKTVTSATIIYHLAKSSGGQVLVCAPSNVAVDQLCERIHRTGLKVVRLT 494
Query: 334 YK 335
K
Sbjct: 495 AK 496
>gi|347965371|ref|XP_322028.4| AGAP001133-PA [Anopheles gambiae str. PEST]
gi|333470541|gb|EAA01007.4| AGAP001133-PA [Anopheles gambiae str. PEST]
Length = 1161
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 145/265 (54%), Gaps = 10/265 (3%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
N ++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL
Sbjct: 619 FNSILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 677
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFI 710
+L L +QYRMHP +S FP+ FY + +G + + + + F+
Sbjct: 678 VALGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCADERKLKVDFPWPSPDCPMFFL 737
Query: 711 NIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
+ G+E+ S N E S V KI + KA + Q IG+++PY Q + +
Sbjct: 738 -VTQGQEEIAGSGTSYLNRTEASNVEKITTRFLKAGIKPDQ---IGIITPYEGQRAYLVQ 793
Query: 769 KIGFE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTR 826
+ ++ +K +++ S+D FQG E+DIII+S VR N IGF++ P+R+NVALTR
Sbjct: 794 YMQYQGSLHSKLYQEIEIASVDAFQGREKDIIIMSCVRANEHQGIGFLNDPRRLNVALTR 853
Query: 827 ARHCLWILGSERTLISSESIWGALV 851
A++ + I+G+ + L E +W L+
Sbjct: 854 AKYGIIIVGNPKVLAKQE-LWNHLL 877
Score = 50.1 bits (118), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRT-LACTPT 315
LN SQV A+ L+R + LI GPPGTGKT T + ++ L R+ L C P+
Sbjct: 460 LNRSQVYAVRHALQR-------PLSLIQGPPGTGKTVTSATIVYQLARLNSGPILVCAPS 512
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ + ++P+
Sbjct: 513 NTAVDQLTEKIHRTNLKVVRVCARSREAIDSPV 545
>gi|383847285|ref|XP_003699285.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Megachile rotundata]
Length = 1119
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 617 ILIDESMQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 675
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + K F +
Sbjct: 676 GIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVT 735
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E S V KI + + V +Q IGV++PY Q + + +
Sbjct: 736 QGQEEIAGSGTSYLNRTEASNVEKIATRFLRCGVKPEQ---IGVITPYEGQRAYLVQYMQ 792
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ +K ++V S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA++
Sbjct: 793 YQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKY 852
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 853 GIIIVGNPKVL-SKQPLWNHLL 873
Score = 47.0 bits (110), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPT 315
LN SQV A+ ++R + LI GPPGTGKT T + ++ L++ L C P+
Sbjct: 455 LNRSQVYAVKHAVQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 507
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ K ++P+
Sbjct: 508 NTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPV 540
>gi|389583252|dbj|GAB65987.1| regulator of nonsense transcripts [Plasmodium cynomolgi strain B]
Length = 1470
Score = 145 bits (365), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 138/253 (54%), Gaps = 14/253 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DEA Q E E +PL + G VL+GD CQL ++ K + AG G+SLFERL L
Sbjct: 866 VLVDEATQSTEPECLVPL-VTGAKQIVLVGDHCQLGPIIVCKKAANAGLGKSLFERLVML 924
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYE-KQYLTGTEFGTYSFINI 712
+ L +QYRMHP++S FP+ FY + +G +K + Y K + F N
Sbjct: 925 GITPFRLEVQYRMHPALSEFPSYVFYDGCLQNGITLKEREYPLKDFPWPNPKCPMFFYNS 984
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI----R 767
G E S N E S + K+++ L + Q IGV++PY Q I +
Sbjct: 985 TGLEEMSASGTSYLNRAEASNMEKLVRTLINCGLKPTQ---IGVITPYEGQRAYITSLFQ 1041
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
K I +++ + ++V S+D FQG E+D I++S VR N IGF++ P+R+NVALTRA
Sbjct: 1042 KNISYQHSTE----IEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRA 1097
Query: 828 RHCLWILGSERTL 840
++ L I G+ + L
Sbjct: 1098 KYGLIICGNAKVL 1110
Score = 50.8 bits (120), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 255 STLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC-RTLACT 313
+ LN SQ+ A+ L S + LI GPPGTGKT T + L+ L + K + L
Sbjct: 700 AALNHSQIDAIKKSLV-------SPLSLIQGPPGTGKTLTCATLVYHLSKTKMGKVLVTA 752
Query: 314 PTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRL 359
P+NVA+ +L+ R+ K + + ++S + + D L N+ +L
Sbjct: 753 PSNVAVDQLSVRIHKTGLKVVRLCAKSREYVPSIADYLYLHNQMKL 798
>gi|66553048|ref|XP_393330.2| PREDICTED: regulator of nonsense transcripts 1 [Apis mellifera]
gi|380015761|ref|XP_003691864.1| PREDICTED: regulator of nonsense transcripts 1-like [Apis florea]
Length = 1119
Score = 145 bits (365), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 617 ILIDESMQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 675
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + K F +
Sbjct: 676 GIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVT 735
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E S V KI + + V +Q IGV++PY Q + + +
Sbjct: 736 QGQEEIAGSGTSYLNRTEASNVEKIATRFLRCGVKPEQ---IGVITPYEGQRAYLVQYMQ 792
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ +K ++V S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA++
Sbjct: 793 YQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKY 852
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 853 GIIIVGNPKVL-SKQPLWNHLL 873
Score = 47.0 bits (110), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPT 315
LN SQV A+ ++R + LI GPPGTGKT T + ++ L++ L C P+
Sbjct: 455 LNRSQVYAVKHAVQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 507
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ K ++P+
Sbjct: 508 NTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPV 540
>gi|340721321|ref|XP_003399071.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Bombus terrestris]
Length = 1119
Score = 145 bits (365), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 617 ILIDESMQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 675
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + K F +
Sbjct: 676 GIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVT 735
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E S V KI + + V +Q IGV++PY Q + + +
Sbjct: 736 QGQEEIAGSGTSYLNRTEASNVEKIATRFLRCGVKPEQ---IGVITPYEGQRAYLVQYMQ 792
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ +K ++V S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA++
Sbjct: 793 YQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKY 852
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 853 GIIIVGNPKVL-SKQPLWNHLL 873
Score = 47.0 bits (110), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPT 315
LN SQV A+ ++R + LI GPPGTGKT T + ++ L++ L C P+
Sbjct: 455 LNRSQVYAVKHAVQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 507
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ K ++P+
Sbjct: 508 NTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPV 540
>gi|156096655|ref|XP_001614361.1| regulator of nonsense transcripts [Plasmodium vivax Sal-1]
gi|148803235|gb|EDL44634.1| regulator of nonsense transcripts, putative [Plasmodium vivax]
Length = 1539
Score = 145 bits (365), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 138/253 (54%), Gaps = 14/253 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DEA Q E E +PL + G VL+GD CQL ++ K + AG G+SLFERL L
Sbjct: 982 VLVDEATQSTEPECLVPL-VTGAKQIVLVGDHCQLGPIIVCKKAANAGLGKSLFERLVML 1040
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYE-KQYLTGTEFGTYSFINI 712
+ L +QYRMHP++S FP+ FY + +G +K + Y K + F N
Sbjct: 1041 GITPFRLEVQYRMHPALSEFPSYVFYDGCLQNGITLKEREYPLKDFPWPNPKCPMFFYNS 1100
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI----R 767
G E S N E S + K+++ L + Q IGV++PY Q I +
Sbjct: 1101 TGLEEMSASGTSYLNRAEASNMEKLVRTLISCGLKPTQ---IGVITPYEGQRAYITSLFQ 1157
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
K I +++ + ++V S+D FQG E+D I++S VR N IGF++ P+R+NVALTRA
Sbjct: 1158 KNISYQHSTE----IEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRA 1213
Query: 828 RHCLWILGSERTL 840
++ L I G+ + L
Sbjct: 1214 KYGLIICGNAKVL 1226
Score = 50.4 bits (119), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 255 STLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC-RTLACT 313
+ LN SQ+ A+ L S + LI GPPGTGKT T + L+ L + K + L
Sbjct: 816 AALNHSQIDAIKKSLV-------SPLSLIQGPPGTGKTLTCATLVYHLSKTKMGKVLVTA 868
Query: 314 PTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRL 359
P+NVA+ +L+ R+ K + + ++S + + D L N+ +L
Sbjct: 869 PSNVAVDQLSVRIHKTGLKVVRLCAKSREYVPSIADYLYLHNQMKL 914
>gi|340721323|ref|XP_003399072.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Bombus terrestris]
Length = 1108
Score = 145 bits (365), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 606 ILIDESMQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 664
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + K F +
Sbjct: 665 GIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVT 724
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E S V KI + + V +Q IGV++PY Q + + +
Sbjct: 725 QGQEEIAGSGTSYLNRTEASNVEKIATRFLRCGVKPEQ---IGVITPYEGQRAYLVQYMQ 781
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ +K ++V S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA++
Sbjct: 782 YQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKY 841
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 842 GIIIVGNPKVL-SKQPLWNHLL 862
Score = 47.0 bits (110), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPT 315
LN SQV A+ ++R + LI GPPGTGKT T + ++ L++ L C P+
Sbjct: 444 LNRSQVYAVKHAVQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 496
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ K ++P+
Sbjct: 497 NTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPV 529
>gi|194865311|ref|XP_001971366.1| GG14918 [Drosophila erecta]
gi|190653149|gb|EDV50392.1| GG14918 [Drosophila erecta]
Length = 1681
Score = 145 bits (365), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/355 (32%), Positives = 182/355 (51%), Gaps = 47/355 (13%)
Query: 526 YLLQ-LHQRRSECLSVLRNLWNSLDELNLPCTT-SKLVLEDFCFKRASLFFSTASSSYKL 583
YLLQ LHQ+ R L D+LN P T + + C RA++ +T SS KL
Sbjct: 1331 YLLQQLHQKE-------RQLQLISDQLNPPLTQREEFEISQTCVARANIICTTLSSCVKL 1383
Query: 584 HSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFG 643
+ + + +IDEA Q E + +P++ G++H VL+GD QLPA+V SK + + G
Sbjct: 1384 ANY-VDFFDICIIDEATQCTEPWTLLPMRF-GLSHLVLVGDTQQLPAVVLSKKAIDFGLC 1441
Query: 644 RSLFERL-------------TSLNHSKHL-LNIQYRMHPSISLFPNLQFYRNQILDGANV 689
S+F+R+ L H+K L++QYRMHP I +PN FY +Q+++
Sbjct: 1442 NSMFDRIQRSLQTQLDKPGSNQLMHTKLFKLSMQYRMHPEICRWPNKYFYEDQLINA--- 1498
Query: 690 KSKSYEKQYLTGTEFGTYSFINIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGS 747
E + Y IN+ +++ S N E V K+LQ++ K
Sbjct: 1499 -----ECTARFASALIPYCVINLKYTQDNSCAQTKSISNDEEARFVAKLLQEMDKHMPS- 1552
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT 807
++ S G++SPY Q + + I + + +++D +QG E+D+IIIS R T
Sbjct: 1553 -KRFSYGLISPYQNQCYVLSQLIP------NHMNITPQTVDSYQGLEKDVIIISNAR--T 1603
Query: 808 GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFN 862
G GF++ QR+NVALTR R CL I G+ L + E +W L+ DA++R+ +F+
Sbjct: 1604 RG-CGFLTNYQRLNVALTRPRRCLVICGNFEDLKTVE-MWRNLLDDARSRKVYFD 1656
>gi|350406734|ref|XP_003487865.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Bombus impatiens]
Length = 1119
Score = 145 bits (365), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 617 ILIDESMQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 675
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + K F +
Sbjct: 676 GIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVT 735
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E S V KI + + V +Q IGV++PY Q + + +
Sbjct: 736 QGQEEIAGSGTSYLNRTEASNVEKIATRFLRCGVKPEQ---IGVITPYEGQRAYLVQYMQ 792
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ +K ++V S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA++
Sbjct: 793 YQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKY 852
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 853 GIIIVGNPKVL-SKQPLWNHLL 873
Score = 47.0 bits (110), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPT 315
LN SQV A+ ++R + LI GPPGTGKT T + ++ L++ L C P+
Sbjct: 455 LNRSQVYAVKHAVQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 507
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ K ++P+
Sbjct: 508 NTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPV 540
>gi|219113369|ref|XP_002186268.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583118|gb|ACI65738.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1189
Score = 145 bits (365), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 138/267 (51%), Gaps = 8/267 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+V+DEAAQ E + QL G HAVL+GD QLPA V + + + RSLF+RL
Sbjct: 842 VVVDEAAQSVEPATLSAFQL-GSRHAVLVGDPQQLPATVFNISGRLSKYDRSLFQRLEEA 900
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI- 712
++LN QYRMHPSIS FP FY +LDG NV+ Y L SF +
Sbjct: 901 GQPVYMLNEQYRMHPSISHFPRHIFYGGTLLDGPNVRKSDYGNPLLGMVTRTLPSFSPLM 960
Query: 713 ---IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKK 769
+ +E+ S N E + + +L G + + V++PY Q +R+
Sbjct: 961 ILDLDSKEERGGTSLSNSGEAQLAVYLYMRLKGISRGLSAETKVAVITPYAQQARMLREY 1020
Query: 770 IGFEY-ENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
G N + F V+V ++D FQG E +I+I S VR IGF+S +R+NVALTRA+
Sbjct: 1021 FGDALGPNYEKF-VEVNTVDAFQGREANIVIFSAVRAAGSHGIGFLSDVRRMNVALTRAK 1079
Query: 829 HCLWILGSERTLISSESIWGALVCDAK 855
H L+++ +++ + W LV A+
Sbjct: 1080 HFLFVIARCDSIVVNP-YWSDLVTHAR 1105
>gi|399218391|emb|CCF75278.1| unnamed protein product [Babesia microti strain RI]
Length = 1229
Score = 145 bits (365), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 143/269 (53%), Gaps = 16/269 (5%)
Query: 594 LVIDEAAQLK-------ESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSL 646
++IDE AQ E + IPL + N VLIGD QL + S+ + G SL
Sbjct: 928 VIIDECAQSIGKLTLDIECSNIIPLTHS-CNQLVLIGDHKQLRPTILSQDALFKGLSISL 986
Query: 647 FERLTSLNHS-KHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFG 705
ERL S HLLN+Q RMHPSIS FPN FY +++ DG NV + + K + E
Sbjct: 987 LERLAIFAPSCVHLLNVQRRMHPSISQFPNQHFYEHRLTDGENVFAYTPLKGFKWPCENF 1046
Query: 706 TYSFINIIGGREDFIY-----HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYT 760
F+++ G Y S NI+E + V+ +L A G IG+++PY
Sbjct: 1047 NVCFVDVSIGCAGSNYERPQGQSKYNIIETNVVVALLSSFISA--GEITSRQIGILTPYD 1104
Query: 761 AQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRV 820
+Q ++ KI + + +++ S+DGFQG E+D+II S VR N+ G++GF+ +R+
Sbjct: 1105 SQKYHLKTKINSTFPSDVCNGLEIDSVDGFQGKEKDLIIFSAVRSNSDGTVGFLKDSRRM 1164
Query: 821 NVALTRARHCLWILGSERTLISSESIWGA 849
NV LTRAR + ++G TL++ + W A
Sbjct: 1165 NVMLTRARRGIVVVGDRFTLMNETTNWKA 1193
>gi|322789964|gb|EFZ15058.1| hypothetical protein SINV_12997 [Solenopsis invicta]
Length = 966
Score = 145 bits (365), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 462 ILIDESMQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 520
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + K F +
Sbjct: 521 GIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVT 580
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E S V KI + + V +Q IGV++PY Q + + +
Sbjct: 581 QGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVKPEQ---IGVITPYEGQRAYLVQYMQ 637
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ +K ++V S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA++
Sbjct: 638 YQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKY 697
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 698 GIIIVGNPKVL-SKQPLWNHLL 718
Score = 47.0 bits (110), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPT 315
LN SQV A+ ++R + LI GPPGTGKT T + ++ L++ L C P+
Sbjct: 300 LNRSQVYAVKHAIQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 352
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ K ++P+
Sbjct: 353 NTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPV 385
>gi|321479359|gb|EFX90315.1| hypothetical protein DAPPUDRAFT_309786 [Daphnia pulex]
Length = 1738
Score = 145 bits (365), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 170/320 (53%), Gaps = 36/320 (11%)
Query: 559 KLVLEDFCFKRASLFFSTASS--SYKLHSV---EIKPLNFL--VIDEAAQLKESESTIPL 611
+L ++ RA + +T +S S ++ ++ E +FL ++DEA+Q E ES PL
Sbjct: 1408 RLAMKKHLISRAQIICTTLNSCRSREMETLFIEERSSKSFLCCILDEASQCTEPESLTPL 1467
Query: 612 QLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS----LNHSKH----LLNIQ 663
GI+ VLIGD QLPA V S+++ + F +SLF R S N +LN Q
Sbjct: 1468 AF-GISKLVLIGDPDQLPATVTSQVAAKNRFDQSLFNRFYSNRMITNRENEEGVMMLNTQ 1526
Query: 664 YRMHPSISLFPNLQFYRNQIL--DGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIY 721
YRM PSI +P+ FY +++ +G YE Y +N+I G E
Sbjct: 1527 YRMAPSICEWPSKYFYGGKLVTAEGLIRNGPCYE-----------YRVLNVIDGLEQLAD 1575
Query: 722 HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFT 781
S +N E + V KI+ + + + + S+GV++ Y +Q I KK+ E +
Sbjct: 1576 QSFKNEKEATLVAKIVMLIVNSPLTRGK--SVGVITFYRSQQQCIVKKMTEEVNRINASR 1633
Query: 782 VKVKSIDGFQGGEEDIIIISTVRC----NTGGSIGFISKPQRVNVALTRARHCLWILGSE 837
V+V ++D FQG E+DI+I+S VR N GG IGF+S QR+NVA+TRA+ L + G
Sbjct: 1634 VEVNTVDSFQGREKDIVIVSCVRAREVRNLGGDIGFVSSLQRMNVAMTRAKESLIVCGHF 1693
Query: 838 RTLISSESIWGALVCDAKAR 857
+TL +E+ W L+ +A++R
Sbjct: 1694 QTLQMNET-WQDLINNARSR 1712
Score = 44.7 bits (104), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 257 LNESQVGAMLACLRRLDCG--HRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-------C 307
LN Q A+ + R + C V L+ GPPGTGK+ + L+ ++ +
Sbjct: 1205 LNPCQYQAVESITRTMVCASDREPKVALLQGPPGTGKSHVIVELISRMMFMHYEKTSSFP 1264
Query: 308 RTLACTPTNVAITELASRVL 327
R L C P+N AI E+A+R++
Sbjct: 1265 RILVCAPSNNAIDEIANRLM 1284
>gi|402220492|gb|EJU00563.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dacryopinax sp. DJM-731 SS1]
Length = 868
Score = 145 bits (365), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/284 (35%), Positives = 148/284 (52%), Gaps = 41/284 (14%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P+ FL DEA+ E S IPL + G H LIGD QLP ++ S + G +SLFER
Sbjct: 539 PVVFL--DEASMSTEPASLIPL-MKGSRHVALIGDHKQLPPIITSAEAQAGGLSKSLFER 595
Query: 650 LTSLNHSKH-LLNIQYRMHPSISLFPNLQFYRNQILDG------------ANVKSKSYEK 696
LT + +L++QYRMHPSIS FP+ QFY + DG A KS +
Sbjct: 596 LTEEGDTPSIMLDMQYRMHPSISRFPSAQFYNKTLRDGTVDHAGKVRPSLAPPKSTLLDD 655
Query: 697 QYL----TGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLY---KAWVGSKQ 749
+ + T E + F++ G E S N E V I+++L + G
Sbjct: 656 ESVSELQTEKERLSVVFVDH-AGSEAKKDRSRINAGEAQMVCSIVEELLYCNPSMTGD-- 712
Query: 750 KVSIGVVSPYTAQVVAIRKKIGFEYENKDGF-------------TVKVKSIDGFQGGEED 796
IG+++PY AQ+ + + + + E + F ++VK++DGF+G E++
Sbjct: 713 --DIGIIAPYVAQIRLLDRLLKHDQEQAERFKSTLGEHRGLQMSNIEVKTVDGFEGREKE 770
Query: 797 IIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTL 840
+II STVR N G+IGF++ +R+NV LTRAR L++LG+ TL
Sbjct: 771 VIIFSTVRNNPQGAIGFLADGRRLNVGLTRARRALFVLGNAGTL 814
>gi|346970142|gb|EGY13594.1| ATP-dependent helicase NAM7 [Verticillium dahliae VdLs.17]
Length = 1099
Score = 145 bits (365), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/286 (35%), Positives = 152/286 (53%), Gaps = 12/286 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL +L
Sbjct: 612 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVNL 670
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG-ANVKSKSYEKQYLTGTEFGTYSFINI 712
LN QYRMHP +S FP+ FY + +G + + + + F +
Sbjct: 671 RLQPIRLNTQYRMHPCLSEFPSNMFYDGSLQNGVTHAQRLRRDVDFPWPVADTPMMFWSN 730
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRK 768
+G E S N E S V K++ + +KA V + IGV++PY Q +V+ +
Sbjct: 731 LGNEEISASGTSYLNRTEASNVEKVVTRFFKAGVKPQD---IGVITPYEGQRSYIVSTMQ 787
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
G ++ + V+V S+D FQG E+D I++S VR + IGF+S P+R+NV LTRA+
Sbjct: 788 NTG-TFKKESYKEVEVASVDAFQGREKDFIVLSCVRSSDNQGIGFLSDPRRLNVGLTRAK 846
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARL 874
+ L ILG+ + L S +W L+ K R+C N AKA L
Sbjct: 847 YGLVILGNPKVL-SKHELWHHLLVHFKDRKCLVEG-PLTNPAKAPL 890
Score = 52.0 bits (123), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 20/122 (16%)
Query: 219 VITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRS 278
++ ++LG D V K +KF LN+SQ+ A+ A L+ +
Sbjct: 420 IVHKLLGRDVAV--------APMKTAMPKKFTAPGLPDLNQSQISAIKAVLQ-------T 464
Query: 279 GVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKES 333
+ LI GPPGTGKT T + ++ L + + L C P+NVA+ +L R+ LK+V+ +
Sbjct: 465 PLSLIQGPPGTGKTVTSATIIYHLAKSSGGQVLVCAPSNVAVDQLCERIHRTGLKVVRLT 524
Query: 334 YK 335
K
Sbjct: 525 AK 526
>gi|350406741|ref|XP_003487867.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3
[Bombus impatiens]
Length = 1108
Score = 145 bits (365), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 606 ILIDESMQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 664
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + K F +
Sbjct: 665 GIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVT 724
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E S V KI + + V +Q IGV++PY Q + + +
Sbjct: 725 QGQEEIAGSGTSYLNRTEASNVEKIATRFLRCGVKPEQ---IGVITPYEGQRAYLVQYMQ 781
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ +K ++V S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA++
Sbjct: 782 YQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKY 841
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 842 GIIIVGNPKVL-SKQPLWNHLL 862
Score = 47.0 bits (110), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPT 315
LN SQV A+ ++R + LI GPPGTGKT T + ++ L++ L C P+
Sbjct: 444 LNRSQVYAVKHAVQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 496
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ K ++P+
Sbjct: 497 NTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPV 529
>gi|440292009|gb|ELP85251.1| hypothetical protein EIN_084130, partial [Entamoeba invadens IP1]
Length = 1022
Score = 145 bits (365), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/315 (34%), Positives = 160/315 (50%), Gaps = 29/315 (9%)
Query: 595 VIDEAAQLKESESTIPLQLAGI---NHAVLIGDECQLPAMVESKISDEAGFGRSLFERL- 650
+IDEAAQ E E+ LAG+ A+LIGD QL V S + GF +++FERL
Sbjct: 647 IIDEAAQSLEPET-----LAGVMNVRKAILIGDIQQLEPCVTSPKAKALGFDKTMFERLL 701
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK--QYLTGTEFGTYS 708
S + + LLN QYRMHP +S F N FY ++++DG +S ++
Sbjct: 702 ASESVPRTLLNTQYRMHPFLSTFSNKVFYSSRLIDGVTAMDRSDPNVVPFIFKNVKTPLM 761
Query: 709 FINIIGGREDFIYHSCR---NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVA 765
FIN G ++I +S N+ E V K++Q L + V + IG++SPYT Q
Sbjct: 762 FINCDGS--EYIGNSGSSFGNVSESKIVNKLVQGLKEKNVADDR---IGIISPYTTQRDL 816
Query: 766 IRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALT 825
+ + T+KV S+DGFQG E+D II STVR N IGF+S +R+NV+LT
Sbjct: 817 L---------STISSTIKVASVDGFQGNEKDYIIFSTVRSNKEIGIGFVSDYRRLNVSLT 867
Query: 826 RARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGA 885
RAR ++I+G+ TL + +WG L C F + + VSKE +
Sbjct: 868 RARLGMYIVGNVETL-AHNRVWGMLFNYLNKNNCIFKNENNTLVQYTPSCVSKETIYNSP 926
Query: 886 ESLTSTSQGGKKEEF 900
+T G +++F
Sbjct: 927 FQITYRVDNGDEDDF 941
>gi|383847287|ref|XP_003699286.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Megachile rotundata]
Length = 1106
Score = 145 bits (365), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 604 ILIDESMQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 662
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + K F +
Sbjct: 663 GIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVT 722
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E S V KI + + V +Q IGV++PY Q + + +
Sbjct: 723 QGQEEIAGSGTSYLNRTEASNVEKIATRFLRCGVKPEQ---IGVITPYEGQRAYLVQYMQ 779
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ +K ++V S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA++
Sbjct: 780 YQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKY 839
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 840 GIIIVGNPKVL-SKQPLWNHLL 860
Score = 47.0 bits (110), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPT 315
LN SQV A+ ++R + LI GPPGTGKT T + ++ L++ L C P+
Sbjct: 442 LNRSQVYAVKHAVQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 494
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ K ++P+
Sbjct: 495 NTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPV 527
>gi|363749513|ref|XP_003644974.1| hypothetical protein Ecym_2426 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888607|gb|AET38157.1| Hypothetical protein Ecym_2426 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1002
Score = 145 bits (365), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 146/271 (53%), Gaps = 9/271 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IP+ + G +L+GD QL ++ + + AG +SLFE+L SL
Sbjct: 579 VLIDESTQASEPECLIPV-VKGTKQVILVGDHQQLGPVILDRKAGNAGLKQSLFEKLVSL 637
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
H L +QYRM+P +S FP+ FY + +G V+ ++ +
Sbjct: 638 GHVPIRLEVQYRMNPYLSEFPSNMFYEGTLQNGVTVEQRTILESSFPWPISDIPMMFWAN 697
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
GRE+ + S N +E +I+ +L+K V Q IGV++PY Q I + +
Sbjct: 698 YGREEISANGTSYLNRIEAINCERIITRLFKDGVKPAQ---IGVITPYEGQRAYIVQYMQ 754
Query: 772 FEYE-NKDGF-TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+KD + TV+V S+D FQG E+D II+S VR N SIGF+ P+R+NVALTRA++
Sbjct: 755 MNGSMDKDMYMTVEVGSVDAFQGREKDYIILSCVRANDHQSIGFLVDPRRLNVALTRAKY 814
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCF 860
L ILG+ +L + +W L+ + + C
Sbjct: 815 GLAILGNPTSLFRNR-LWNHLLIHFREKGCL 844
Score = 51.2 bits (121), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 13/90 (14%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRT 309
P+F+ LN SQ A+ L+R + LI GPPGTGKT T + ++ L ++ K R
Sbjct: 414 PNFTK-LNASQKNAIKHVLQR-------PLSLIQGPPGTGKTVTSATIIYHLSKMHKERL 465
Query: 310 LACTPTNVAITELASRV----LKLVKESYK 335
L C P+N A+ LA+++ LK+V+ + K
Sbjct: 466 LVCAPSNTAVDHLAAKLRDLGLKVVRLTAK 495
>gi|308810613|ref|XP_003082615.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
gi|116061084|emb|CAL56472.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
Length = 545
Score = 145 bits (365), Expect = 3e-31, Method: Composition-based stats.
Identities = 95/273 (34%), Positives = 143/273 (52%), Gaps = 33/273 (12%)
Query: 595 VIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLN 654
V+DEA Q E + I L A AVL+GD QLP V S+ + +AG S+FER+ L
Sbjct: 263 VLDEATQCTEPAALIALSKA--LSAVLVGDSRQLPPTVVSRDAVDAGLQISIFERMERLG 320
Query: 655 HSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIG 714
LL++QYRMHP I+ FP+ FY ++ + + F+ I
Sbjct: 321 VKVSLLDLQYRMHPLIAEFPSQAFYSGKVGSAPTPQDRPIVPGVAWPKPNVPVVFLEIND 380
Query: 715 GREDFIYHSCR--------NIVEVSAVIKILQKLYKA--WVGSKQKVSIGVVSPYTAQVV 764
CR N+ E I +++K+ + G IGV+SPY AQV
Sbjct: 381 AE-------CRAPDGNSLYNVEEAKTAITVVKKILASGDLAGPG---DIGVISPYAAQVR 430
Query: 765 AIRKKIG---------FEYENKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFI 814
++++ G +Y ++D ++++S+DGFQG E+++I++ TVR NTGG IGF+
Sbjct: 431 LLQEEYGVLGTAKRNYLDYTDEDKMKELEIRSVDGFQGREKEVIVLCTVRSNTGGGIGFV 490
Query: 815 SKPQRVNVALTRARHCLWILGSERTLISSESIW 847
P+R+NV +TRAR L +LG+ RTL S+ IW
Sbjct: 491 DDPRRLNVGITRARRGLIVLGNRRTL-STNEIW 522
>gi|345491348|ref|XP_003426578.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3
[Nasonia vitripennis]
Length = 1121
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 618 ILIDESMQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 676
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + K F +
Sbjct: 677 GIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVT 736
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E S V KI + + V +Q IGV++PY Q + + +
Sbjct: 737 QGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVKPEQ---IGVITPYEGQRAYLVQYMQ 793
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ +K ++V S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA++
Sbjct: 794 YQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKY 853
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 854 GIIIVGNPKVL-SKQPLWNHLL 874
Score = 47.4 bits (111), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPT 315
LN SQV A+ ++R + LI GPPGTGKT T + ++ L++ L C P+
Sbjct: 456 LNRSQVYAVKHAIQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 508
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ K ++P+
Sbjct: 509 NTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPV 541
>gi|429965384|gb|ELA47381.1| hypothetical protein VCUG_01150 [Vavraia culicis 'floridensis']
Length = 1568
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 171/320 (53%), Gaps = 18/320 (5%)
Query: 546 NSLDELNLPCTTSKLVLEDFC--FKRASLFFSTASSSYK-LHSVEIKPLNFLVIDEAAQL 602
N ++ +NL T S+ C KR+++ +T SSS K L V + L+IDEA Q
Sbjct: 1255 NGMNLMNLEVTNSERAKRK-CELLKRSNVVCATLSSSAKELIKVANIDFDILIIDEACQS 1313
Query: 603 KESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNI 662
E+ + IPL+ I VL+GD QLP + IS + +SLF RL + LLN+
Sbjct: 1314 VETSTLIPLKFNPIK-VVLVGDPKQLPPTL---ISKHKPYEQSLFARLQK-TYPSVLLNV 1368
Query: 663 QYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYH 722
QYRMHP I FPN FYR ++L +++ ++Q SFI I G +
Sbjct: 1369 QYRMHPLIVEFPNQYFYRARLLTHKSIQ----KRQNPYENVIPPISFIQINGEEKTDNCF 1424
Query: 723 SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTV 782
S NI E + I+ +L + IG+++PY AQ+ I++ + ++ F V
Sbjct: 1425 SFYNIEEAQYIGSIISELMEQVKNYDFFNKIGIITPYKAQMKKIKEVLLSIRQDIFDF-V 1483
Query: 783 KVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLIS 842
V ++DGFQG E+D+I+ISTV+ ++GF+S +R+NV++TRA+H L I+G+ + L S
Sbjct: 1484 CVNTVDGFQGQEKDVILISTVK---SKNMGFLSDVRRINVSITRAKHSLIIIGNSKVL-S 1539
Query: 843 SESIWGALVCDAKARQCFFN 862
S W +++ + FN
Sbjct: 1540 SSGAWKSMLNHYGKKNFVFN 1559
Score = 45.1 bits (105), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 15/60 (25%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKC---------------RTLACTPTNVAITELASRV 326
LI GPPGTGKTK + L+ +L + R L C P+N A+ ELA R+
Sbjct: 1150 LIHGPPGTGKTKMIVSLIESLFNAQIVSVLKSKMFITNREPRVLICAPSNAAVDELARRI 1209
>gi|221055089|ref|XP_002258683.1| regulator of nonsense transcripts [Plasmodium knowlesi strain H]
gi|193808753|emb|CAQ39455.1| regulator of nonsense transcripts, putative [Plasmodium knowlesi
strain H]
Length = 1516
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 138/253 (54%), Gaps = 14/253 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DEA Q E E +PL + G VL+GD CQL ++ K + AG G+SLFERL L
Sbjct: 957 VLVDEATQSTEPECLVPL-VTGAKQIVLVGDHCQLGPIIVCKKAANAGLGKSLFERLVML 1015
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYE-KQYLTGTEFGTYSFINI 712
+ L +QYRMHP++S FP+ FY + +G +K + Y K + F N
Sbjct: 1016 GITPFRLEVQYRMHPALSEFPSYVFYDGCLQNGITLKEREYPLKDFPWPNPKCPMFFYNS 1075
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI----R 767
G E S N E S + K+++ L + Q IGV++PY Q I +
Sbjct: 1076 TGLEEMSASGTSYLNRAEASNMEKLVRTLINCGLKPSQ---IGVITPYEGQRAYITSLFQ 1132
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
K I +++ + ++V S+D FQG E+D I++S VR N IGF++ P+R+NVALTRA
Sbjct: 1133 KNISYQHSTE----IEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRA 1188
Query: 828 RHCLWILGSERTL 840
++ L I G+ + L
Sbjct: 1189 KYGLIICGNAKVL 1201
Score = 51.2 bits (121), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 255 STLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC-RTLACT 313
+ LN SQ+ A+ L S + LI GPPGTGKT T + L+ L + K + L
Sbjct: 791 AALNHSQIDAIKKSLV-------SPLSLIQGPPGTGKTLTCATLVYHLSKTKMGKVLVTA 843
Query: 314 PTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRL 359
P+NVA+ +L+ R+ K + + ++S + + D L N+ +L
Sbjct: 844 PSNVAVDQLSVRIHKTGLKVVRLCAKSREYVPSIADYLYLHNQMKL 889
>gi|345491350|ref|XP_001604124.2| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Nasonia vitripennis]
Length = 1105
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 605 ILIDESMQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 663
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + K F +
Sbjct: 664 GIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVT 723
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E S V KI + + V +Q IGV++PY Q + + +
Sbjct: 724 QGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVKPEQ---IGVITPYEGQRAYLVQYMQ 780
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ +K ++V S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA++
Sbjct: 781 YQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKY 840
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 841 GIIIVGNPKVL-SKQPLWNHLL 861
Score = 47.0 bits (110), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPT 315
LN SQV A+ ++R + LI GPPGTGKT T + ++ L++ L C P+
Sbjct: 443 LNRSQVYAVKHAIQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 495
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ K ++P+
Sbjct: 496 NTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPV 528
>gi|66805537|ref|XP_636490.1| hypothetical protein DDB_G0288923 [Dictyostelium discoideum AX4]
gi|74852418|sp|Q54I89.1|RENT1_DICDI RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=Up-frameshift suppressor 1 homolog
gi|60464869|gb|EAL62985.1| hypothetical protein DDB_G0288923 [Dictyostelium discoideum AX4]
Length = 1331
Score = 144 bits (364), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 160/335 (47%), Gaps = 29/335 (8%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
++IDE+ Q E E IPL + G +L+GD QL P ++ K+ D AG +SLFERL S
Sbjct: 703 ILIDESTQASEPECLIPL-MMGAKQVILVGDHRQLGPVLLCKKVVD-AGLSQSLFERLIS 760
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L H L IQYRMHPS++ FP+ Y Q++ + + + ++ F N
Sbjct: 761 LGHHPERLTIQYRMHPSLTEFPSNTSYEGQLVSELSHTDRDSQSKFPWPQPKDPMFFFNC 820
Query: 713 IGGRE------DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
G E FI N E S KI+ K + Q IG+++PY Q I
Sbjct: 821 TGSEEISSSGTSFI-----NTTEASICEKIVTKFLELGSLPGQ---IGIITPYEGQRAYI 872
Query: 767 RK------KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRV 820
K+ E +++V S+D FQG E+D II+S VR N IGF+ P+R+
Sbjct: 873 TSHMQKSGKLNLELYK----SIEVASVDSFQGREKDYIILSCVRSNDYQGIGFLQDPRRL 928
Query: 821 NVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKEL 880
NVALTRAR L ILG+ + L S + +W +L+ K + NL ++ + + K
Sbjct: 929 NVALTRARFGLIILGNAKVL-SKDPLWNSLISHFKNKNVLVEGSLA-NLKQSPVILQKPK 986
Query: 881 VEIGAESLTSTSQGGKKEEFEFEFVKAFRSINLIH 915
G L Q ++ E + +N+++
Sbjct: 987 KLYGQGKLPIPGQNSNSFNYDREHIDPNIGMNMVY 1021
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 14/95 (14%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI---KCRTLACT 313
LNESQ+ A+ L + + LI GPPGTGKT S ++ L++ + L CT
Sbjct: 537 LNESQISAVNKVLT-------APLSLIQGPPGTGKTVISSFIIHHLVKYVKGNDKVLVCT 589
Query: 314 PTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
P+NVAI +L ++ LK+V+ S K +P+
Sbjct: 590 PSNVAIDQLTGKLHEIGLKVVRLSSKLREEVASPV 624
>gi|350406738|ref|XP_003487866.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Bombus impatiens]
Length = 1106
Score = 144 bits (364), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 604 ILIDESMQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 662
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + K F +
Sbjct: 663 GIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVT 722
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E S V KI + + V +Q IGV++PY Q + + +
Sbjct: 723 QGQEEIAGSGTSYLNRTEASNVEKIATRFLRCGVKPEQ---IGVITPYEGQRAYLVQYMQ 779
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ +K ++V S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA++
Sbjct: 780 YQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKY 839
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 840 GIIIVGNPKVL-SKQPLWNHLL 860
Score = 47.0 bits (110), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPT 315
LN SQV A+ ++R + LI GPPGTGKT T + ++ L++ L C P+
Sbjct: 442 LNRSQVYAVKHAVQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 494
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ K ++P+
Sbjct: 495 NTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPV 527
>gi|345491346|ref|XP_003426577.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Nasonia vitripennis]
Length = 1127
Score = 144 bits (364), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 618 ILIDESMQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 676
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + K F +
Sbjct: 677 GIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVT 736
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E S V KI + + V +Q IGV++PY Q + + +
Sbjct: 737 QGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVKPEQ---IGVITPYEGQRAYLVQYMQ 793
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ +K ++V S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA++
Sbjct: 794 YQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKY 853
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 854 GIIIVGNPKVL-SKQPLWNHLL 874
Score = 47.4 bits (111), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPT 315
LN SQV A+ ++R + LI GPPGTGKT T + ++ L++ L C P+
Sbjct: 456 LNRSQVYAVKHAIQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 508
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ K ++P+
Sbjct: 509 NTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPV 541
>gi|340721325|ref|XP_003399073.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3
[Bombus terrestris]
Length = 1106
Score = 144 bits (364), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 604 ILIDESMQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 662
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + K F +
Sbjct: 663 GIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVT 722
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E S V KI + + V +Q IGV++PY Q + + +
Sbjct: 723 QGQEEIAGSGTSYLNRTEASNVEKIATRFLRCGVKPEQ---IGVITPYEGQRAYLVQYMQ 779
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ +K ++V S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA++
Sbjct: 780 YQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKY 839
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 840 GIIIVGNPKVL-SKQPLWNHLL 860
Score = 47.0 bits (110), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPT 315
LN SQV A+ ++R + LI GPPGTGKT T + ++ L++ L C P+
Sbjct: 442 LNRSQVYAVKHAVQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPS 494
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ K ++P+
Sbjct: 495 NTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPV 527
>gi|412993566|emb|CCO14077.1| predicted protein [Bathycoccus prasinos]
Length = 1063
Score = 144 bits (364), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 169/345 (48%), Gaps = 43/345 (12%)
Query: 548 LDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESES 607
LDE + CTT + F+R F + +++DEAAQ E
Sbjct: 588 LDEAKIVCTTLSAAGSEI-FRRMKTKF-----------------DVIIVDEAAQAVEPSI 629
Query: 608 TIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMH 667
IPL L+GD QLPA V S+ + + +SLF+RL + H L+ QYRM
Sbjct: 630 LIPLTEIKAKQVYLVGDPAQLPATVLSRECAKNNYEQSLFKRLMDSAYPVHKLSTQYRML 689
Query: 668 PSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYH--SCR 725
P I FP+ QFY ++ DG + +++Y +++ + + F ++ G+E+ S
Sbjct: 690 PEIREFPSDQFYGGELRDGPGLLTQNY-REWHECKLYKPFVFYDVQHGKEESSSSGFSWV 748
Query: 726 NIVEVSAVIKILQKLYKA-WVGSKQKVSIGVVSPYTAQVVAIRKKI--GFEYENKDGFTV 782
N E + +++ +L KA V ++ I ++SPY AQV IR+K+ F + G V
Sbjct: 749 NEEEATFAVELAHQLLKANPVLKREGPKIAIISPYRAQVSMIRRKLERKFGGMHNYGRIV 808
Query: 783 KVKSIDGFQGGEEDIIIISTVR---------------CNTGGS---IGFISKPQRVNVAL 824
+V SID QG E+D++I S VR NT +GF++ +R+NV L
Sbjct: 809 EVLSIDNSQGSEKDVVIFSLVRAPLNDMFQISKKASNANTKSRRNVLGFVADERRINVGL 868
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNL 869
TRA+ +++LG+ + +++ + WGALV A+ R C A N
Sbjct: 869 TRAKCSMFVLGNAKAMMTDPN-WGALVESARKRGCTIEAPTRANF 912
>gi|67516729|ref|XP_658250.1| hypothetical protein AN0646.2 [Aspergillus nidulans FGSC A4]
gi|40745995|gb|EAA65151.1| hypothetical protein AN0646.2 [Aspergillus nidulans FGSC A4]
Length = 1062
Score = 144 bits (364), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 147/273 (53%), Gaps = 13/273 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 571 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 629
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
S LN+QYRMHP +S FP+ FY + +G + E + F +
Sbjct: 630 GCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGITSFDRLRREVDFPWPILDSPMMFWSN 689
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRK 768
+G E S N E + V KI+ + +KA V Q IG+++PY Q +V+ +
Sbjct: 690 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGV---QPKDIGIITPYEGQRSYIVSSMQ 746
Query: 769 KIG-FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
G F+ E+ ++V S+D FQG E+D II+S VR N IGF+S P+R+NVALTRA
Sbjct: 747 ATGTFKKEHYK--EIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 804
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCF 860
++ L ILG+ + L S +W L+ K R
Sbjct: 805 KYGLVILGNPKVL-SKHPLWNCLLQHFKERHTL 836
Score = 57.0 bits (136), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q +KF LN SQ+ A+ + L+R + LI GPPGTGKT T
Sbjct: 387 EVAAAPMKTQMPKKFSVPGLPELNGSQINAVKSVLQRP-------LSLIQGPPGTGKTVT 439
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L ++ + L C P+NVA+ +L R+ LK V+ + K +P+
Sbjct: 440 SATIIYHLAKLNGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPV 494
>gi|259489087|tpe|CBF89067.1| TPA: hypothetical protein similar to possible regulator of nonsense
transcripts (Broad) [Aspergillus nidulans FGSC A4]
Length = 1077
Score = 144 bits (364), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 147/273 (53%), Gaps = 13/273 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 586 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 644
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
S LN+QYRMHP +S FP+ FY + +G + E + F +
Sbjct: 645 GCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGITSFDRLRREVDFPWPILDSPMMFWSN 704
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRK 768
+G E S N E + V KI+ + +KA V Q IG+++PY Q +V+ +
Sbjct: 705 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGV---QPKDIGIITPYEGQRSYIVSSMQ 761
Query: 769 KIG-FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
G F+ E+ ++V S+D FQG E+D II+S VR N IGF+S P+R+NVALTRA
Sbjct: 762 ATGTFKKEHYK--EIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 819
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCF 860
++ L ILG+ + L S +W L+ K R
Sbjct: 820 KYGLVILGNPKVL-SKHPLWNCLLQHFKERHTL 851
Score = 57.0 bits (136), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q +KF LN SQ+ A+ + L+R + LI GPPGTGKT T
Sbjct: 402 EVAAAPMKTQMPKKFSVPGLPELNGSQINAVKSVLQRP-------LSLIQGPPGTGKTVT 454
Query: 295 VSMLLLTLLRIK-CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L ++ + L C P+NVA+ +L R+ LK V+ + K +P+
Sbjct: 455 SATIIYHLAKLNGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPV 509
>gi|326934529|ref|XP_003213341.1| PREDICTED: regulator of nonsense transcripts 1-like [Meleagris
gallopavo]
Length = 1059
Score = 144 bits (364), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 11/262 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 576 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 634
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 635 PWG--CLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 692
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 693 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 749
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 750 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 809
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 810 GVIIVGNPKAL-SKQPLWNHLL 830
Score = 50.4 bits (119), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 399 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 451
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 452 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 499
>gi|448387263|ref|ZP_21564594.1| Superfamily I DNA and RNA helicase and helicase subunits-like
protein [Haloterrigena salina JCM 13891]
gi|445671980|gb|ELZ24558.1| Superfamily I DNA and RNA helicase and helicase subunits-like
protein [Haloterrigena salina JCM 13891]
Length = 751
Score = 144 bits (364), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 156/311 (50%), Gaps = 30/311 (9%)
Query: 548 LDELNLPCTTSKLVLEDF--CFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKES 605
L +N +++ +V E + C RA + +T SS+ L + + LV+DEA Q +
Sbjct: 430 LRRVNAGNSSNDVVGERYATCDGRADVVAATNSSAATLD----REFDVLVLDEATQATCT 485
Query: 606 ESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQ-- 663
S IPL A N VL GD QLP ++ E+ G SLFE L + + +Q
Sbjct: 486 ASCIPLARA--NKVVLAGDHKQLPPFSATEDPPESAAGMSLFEHLYADGGVYEGVGVQLR 543
Query: 664 --YRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIY 721
YRMH I+ F N +FY + G +V S + ++ L G + +GG E+ I
Sbjct: 544 TQYRMHRDIAWFSNRRFYDRALRQGRDVASLA-DRPALVGYD---------VGGSEETID 593
Query: 722 HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFT 781
HS RN E V ++ +L + IGV++PYTAQV A+R K+ + E G
Sbjct: 594 HSKRNDAEARLVAHVVDELRTE--AGLEAAEIGVITPYTAQVDAVRTKLTAQLER--GRE 649
Query: 782 VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISK----PQRVNVALTRARHCLWILGSE 837
V V +ID FQG E+ I+IS VR N G +GF+ + P+R+NVA+TRA ++G
Sbjct: 650 VTVDTIDSFQGSEKVAIVISLVRSNADGEVGFLDRPLDGPRRLNVAMTRAERFCALIGDW 709
Query: 838 RTLISSESIWG 848
TL S G
Sbjct: 710 YTLRDSRGGAG 720
>gi|123508693|ref|XP_001329696.1| regulator of nonsense transcripts 1 [Trichomonas vaginalis G3]
gi|121912743|gb|EAY17561.1| regulator of nonsense transcripts 1, putative [Trichomonas
vaginalis G3]
Length = 882
Score = 144 bits (364), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 137/259 (52%), Gaps = 10/259 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E E IP+ + G L+GD QL +V + EAG G S+ +RL L
Sbjct: 554 VIIDEATQAVEPEILIPI-MHGSKQVCLVGDHMQLGPVVTNPKCVEAGLGNSIVQRLVQL 612
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFG-TYSFINI 712
L QYRMHP +S FP+ FY ++++G + ++ ++ + F N
Sbjct: 613 GLRPQRLLTQYRMHPVLSEFPSNTFYDGELMNGIPAEKRTPQQPVFNWPKPSFPLMFYNN 672
Query: 713 IGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+ E+ N E + V +I+ +L KA V +Q IG++SPY+ Q ++ +
Sbjct: 673 VNNEEEISNSGTSYINAFEATIVSQIVTQLCKAGVDPQQ---IGIISPYSGQKFYLQNFL 729
Query: 771 GFEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
F + + S+D FQGGE+D II+S VRCN GSIGF+ +R+NVALTRA+
Sbjct: 730 ASMATLPSSFYQRLAIASVDSFQGGEKDYIIMSCVRCNPHGSIGFLKDYRRLNVALTRAK 789
Query: 829 HCLWILGSERTLISSESIW 847
+ L I+G R L S +W
Sbjct: 790 YGLIIVGCARVL-SKSILW 807
Score = 47.4 bits (111), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Query: 255 STLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC-RTLACT 313
TLN SQV A+ L+ C +I GPPGTGKT T++ L+ L+ K L C
Sbjct: 389 PTLNLSQVNAVSYALKSPFC-------MIQGPPGTGKTTTIAALVTRFLQAKAGPVLVCA 441
Query: 314 PTNVAITELASRV 326
P+N A+ + +
Sbjct: 442 PSNAAVERVTEAI 454
>gi|169852646|ref|XP_001833005.1| ATP dependent helicase [Coprinopsis cinerea okayama7#130]
gi|116505799|gb|EAU88694.1| ATP dependent helicase [Coprinopsis cinerea okayama7#130]
Length = 1079
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 145/289 (50%), Gaps = 10/289 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E E IPL L G V++GD QL ++ +K + AG +SLFERL L
Sbjct: 606 VLIDEATQAAEPECMIPLVL-GCKQVVMVGDHQQLGPVIMNKKAARAGLTQSLFERLVLL 664
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
+ L +QYRMHP +S FP+ FY + +G + + T F
Sbjct: 665 GNRPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTAPERLRKNVDFPWPVPDTPMFFYQN 724
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E S V KI+ K +K+ V Q IGVV+PY Q I +
Sbjct: 725 LGQEEISSSGTSFLNRTEASNVEKIVTKFFKSGVVPNQ---IGVVTPYEGQRSYIVNYMQ 781
Query: 772 FEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K ++V S+D FQG E+D II+S VR N IGF++ P+R+NVALTRA++
Sbjct: 782 FNGSLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKY 841
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
+ ILG+ + L S +W L+ K NL + ++ SK
Sbjct: 842 GVVILGNPKVL-SKHPLWHYLLTHYKESNVLVEG-PLNNLQPSMIQFSK 888
Score = 48.5 bits (114), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
+ Q ++F LN SQ+ A+ + L++ + LI GPPGTGKT T + ++
Sbjct: 429 RTQMPKRFSAPGLPELNHSQMYAVKSVLQK-------PLSLIQGPPGTGKTVTSASIVYH 481
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYK 335
L ++ + L C P+NVA+ +L ++ LK+V+ + K
Sbjct: 482 LAKMNPGQVLVCAPSNVAVDQLTEKIHATGLKVVRLTAK 520
>gi|403337792|gb|EJY68119.1| hypothetical protein OXYTRI_11366 [Oxytricha trifallax]
Length = 1153
Score = 144 bits (363), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 158/327 (48%), Gaps = 42/327 (12%)
Query: 563 EDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLI 622
ED K A + +T +++ K + ++IDEA Q E E+ IP+ L G H +L+
Sbjct: 695 EDEILKNAEVICTTCVAAFDRRLRNFK-FSQVLIDEATQATEPETLIPI-LRGAKHVILV 752
Query: 623 GDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQ 682
GD CQL ++ K + +AG +SLFERL L L +QYRMHP +S FP++ FY
Sbjct: 753 GDHCQLGPVIMCKKAAKAGLNQSLFERLVCLGIRPIRLQVQYRMHPVLSAFPSMTFYEGS 812
Query: 683 ILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSA---------- 732
+ +G + + + + F + YHS N E+SA
Sbjct: 813 LQNGISKQDRI----------LSDFKFQWPASEKPMMFYHSISN-EEISASGTSFLNRQE 861
Query: 733 ---VIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDG-------FTV 782
V ++ + K + +Q IG+++PY Q I Y + G +
Sbjct: 862 AYNVEALVTQFLKFDLKPEQ---IGIITPYEGQKAFIT-----SYMQRSGQLDPSLYKEI 913
Query: 783 KVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLIS 842
+V S+D FQG E+D I++S VR N IGF++ P+R+NVALTRA++ L I G+ + L S
Sbjct: 914 EVASVDSFQGREKDFILLSCVRSNEASGIGFLNDPRRLNVALTRAKYGLVIFGNAKVL-S 972
Query: 843 SESIWGALVCDAKARQCFFNADEERNL 869
+W L+ + K + C NL
Sbjct: 973 KHDLWNNLLNEFKNQGCLVEGPNIFNL 999
Score = 47.0 bits (110), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKC-RTLACTPTNVAITELASRV 326
LI GPPGTGKT T + L+ L++ K + L C P+N+A+ +L ++
Sbjct: 579 LIQGPPGTGKTVTSTTLVTHLVKQKMGKVLVCAPSNIAVDQLTDKI 624
>gi|167516556|ref|XP_001742619.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779243|gb|EDQ92857.1| predicted protein [Monosiga brevicollis MX1]
Length = 856
Score = 144 bits (363), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 138/274 (50%), Gaps = 9/274 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E E +PL L G V++GD CQL +V K + AG +SLFER L
Sbjct: 532 VLIDEATQSTEPECMLPLVL-GTRQCVMVGDHCQLGPVVMCKKAASAGLSQSLFERCVLL 590
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + T
Sbjct: 591 GIRPVRLQVQYRMHPCLSEFPSNTFYEGSLQNGVTASERLMPAVDFPWPVPETPMMFYAS 650
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V K++ + K+ V +Q IG+V+PY Q I + +
Sbjct: 651 MGQEEISASGTSYLNRTEAANVEKMVTRFLKSGVTPEQ---IGIVTPYEGQRAYIVQYMS 707
Query: 772 FEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F + V+V S+D FQG E+D II+S R N IGF++ P+R+NVALTRA++
Sbjct: 708 FNGTLRQPLYEAVEVASVDAFQGREKDYIILSCTRSNEHQGIGFLNDPRRLNVALTRAKY 767
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
+ I+G+ + L S +++W L+ K C
Sbjct: 768 GIIIVGNPKVL-SKQALWNNLLVHYKENGCLVEG 800
Score = 50.4 bits (119), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 8/71 (11%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPT 315
LN SQ+ A+ A L+R + LI GPPGTGKT T + L+ L++ K + L C P+
Sbjct: 370 LNHSQIEAIRAVLQR-------PLSLIQGPPGTGKTVTSASLVYHLVQQKHGKVLVCAPS 422
Query: 316 NVAITELASRV 326
N+A+ +L ++
Sbjct: 423 NIAVDQLTEKI 433
>gi|156836785|ref|XP_001642437.1| hypothetical protein Kpol_337p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156112963|gb|EDO14579.1| hypothetical protein Kpol_337p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 999
Score = 144 bits (363), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 144/277 (51%), Gaps = 21/277 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
++IDE+ Q E E IP+ + G +L+GD QL P ++E K D AG +SLFERL
Sbjct: 586 VLIDESTQASEPECLIPI-VKGAKQIILVGDHQQLGPVILERKAGD-AGLKQSLFERLIL 643
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L H L +QYRM+P +S FP+ FY + +G ++ ++
Sbjct: 644 LGHVPIRLEVQYRMNPFLSEFPSNMFYEGSLQNGVTIEQRTIPGSTFPWPIHEVPMMFWA 703
Query: 713 IGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
GRE+ + S N +E +I+ +L+K V Q IGV++PY Q I
Sbjct: 704 NYGREEISANGTSFLNRIEAMNCERIITRLFKDGVKPHQ---IGVITPYEGQRAYI---- 756
Query: 771 GFEYENKDG-------FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
+Y +G V+V S+D FQG E+D II+S VR N +IGF+S P+R+NV
Sbjct: 757 -LQYMQMNGSLDKELYVNVEVASVDAFQGREKDYIILSCVRANEQQAIGFLSDPRRLNVG 815
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
LTRA++ L ILG+ R+L S +W L+ + + C
Sbjct: 816 LTRAKYGLVILGNPRSL-SRNVLWNHLLIHFREKGCL 851
Score = 52.0 bits (123), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 13/90 (14%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRT 309
P F+ LN SQ A+ L++ + LI GPPGTGKT T + ++ L + K R
Sbjct: 421 PHFAR-LNASQASAVAHVLQK-------PLSLIQGPPGTGKTVTSATIVYHLSKSHKDRI 472
Query: 310 LACTPTNVAITELASRV----LKLVKESYK 335
L C P+NVA+ LAS++ LK+V+ + K
Sbjct: 473 LVCAPSNVAVDHLASKLRDLGLKVVRLTAK 502
>gi|412990245|emb|CCO19563.1| predicted protein [Bathycoccus prasinos]
Length = 688
Score = 144 bits (363), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 182/373 (48%), Gaps = 22/373 (5%)
Query: 491 FGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQL------HQRRSECLSVLRNL 544
F L + + L +HS+D I +R R + +L + +R+ L+ R
Sbjct: 309 FNVLAINQQIENINLTGTITHSIDMYIQSIEIRDRCIAELARLELVNTKRTPGLNPGRK- 367
Query: 545 WNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKE 604
N EL + TS L + F +L + K +S K + L+IDEAAQ E
Sbjct: 368 -NESTELYIELETSFLDEAEIVFTTLTL---CGRHTLKKNS---KVFDVLLIDEAAQANE 420
Query: 605 SESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQY 664
+ IPL L G+ H +LIGD QLP+ + S+ + A FGRSLF+RL + L+IQY
Sbjct: 421 LATLIPLTL-GVKHCILIGDNFQLPSTIISERAKTAKFGRSLFQRLLENDFDFISLSIQY 479
Query: 665 RMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSC 724
RM P I FP+ FY + D ++ +K + + + + R + S
Sbjct: 480 RMLPEIRHFPSRFFYDGILTDDPSMSNKGVMNKMWPSEPYLLFDTGDTFETRSN--RGSV 537
Query: 725 RNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKV 784
N+ EVS + +L K + + + SI V++PY Q I + + + V
Sbjct: 538 VNLFEVSLIFSLL-KCFTSMNPGRTLQSIAVITPYKEQKDLIEQTLRKTFGRSTSVPC-V 595
Query: 785 KSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSE 844
+IDGFQG E + +IIS VR +IGF+S QR+NVA+TRA+ WILG+ +L +
Sbjct: 596 STIDGFQGKECEFVIISCVRAT--NNIGFLSDAQRLNVAITRAKKRCWILGNLNSL-CRD 652
Query: 845 SIWGALVCDAKAR 857
IW +V DA +R
Sbjct: 653 KIWRHVVEDAVSR 665
>gi|328709620|ref|XP_003244017.1| PREDICTED: regulator of nonsense transcripts 1-like [Acyrthosiphon
pisum]
Length = 1125
Score = 144 bits (363), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 153/302 (50%), Gaps = 18/302 (5%)
Query: 581 YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEA 640
+K HS+ +IDE+ Q E E +P+ L G+ +L+GD CQL +V K + A
Sbjct: 607 FKFHSI--------LIDESMQATEPECMVPVVL-GVKQLILVGDHCQLGPVVMCKKAARA 657
Query: 641 GFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLT 700
G +SLFERL L L +QYRMHP +S FP+ FY + +G + K
Sbjct: 658 GLSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSNFFYEGSLQNGVCADDRKLSKIEFP 717
Query: 701 GTEFGTYSFINIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSP 758
+ G+E+ S N E + V KI + + V Q IG+++P
Sbjct: 718 WPVADKPMLFYVTQGQEEIAGSGTSYLNRTEAANVEKIATRFLRCGVKPDQ---IGIITP 774
Query: 759 YTAQVVAIRKKIGFE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISK 816
Y Q + + + ++ K +++ S+D FQG E+D+II+S VR N IGF++
Sbjct: 775 YEGQRAYLVQYMQYQAPLPAKVYQEIEIASVDAFQGREKDLIIMSCVRSNEHQGIGFLND 834
Query: 817 PQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEV 876
P+R+NVALTRA++ + I+G+ + L S + +W L+ KA NL ++ +++
Sbjct: 835 PRRLNVALTRAKYGILIVGNPKVL-SKQQLWNHLLNYYKANNVLVEG-PLNNLKESLIQL 892
Query: 877 SK 878
SK
Sbjct: 893 SK 894
Score = 50.4 bits (119), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPT 315
LN SQV A+ ++R + LI GPPGTGKT T + ++ L++I L C P+
Sbjct: 450 LNRSQVYAVKHAVQR-------PLSLIQGPPGTGKTVTSATIVYQLVKINGGPVLVCAPS 502
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N+A+ +L ++ LK+V+ K ++P+
Sbjct: 503 NIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPV 535
>gi|156087819|ref|XP_001611316.1| regulator of nonsense transcripts [Babesia bovis T2Bo]
gi|154798570|gb|EDO07748.1| regulator of nonsense transcripts, putative [Babesia bovis]
Length = 1086
Score = 144 bits (363), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 145/262 (55%), Gaps = 12/262 (4%)
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLT 651
+++IDE AQ E + IP+ G VLIGD QL P ++ ++ + E G SL E L
Sbjct: 787 YVIIDECAQSIEPSNLIPIG-KGCRQLVLIGDHMQLRPTIISTEAASE-GLSSSLLENLV 844
Query: 652 SLNHSK-HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFI 710
+ N K HLL++Q RMHPSIS FPN QFY+ I D S++ K + + +FI
Sbjct: 845 NANVGKVHLLDVQRRMHPSISEFPNNQFYKGLITDAIEENSRNPIKGFEWPSPAYNIAFI 904
Query: 711 NIIGGR-----EDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVA 765
+ G E + S N +EV ++ +L+ A G ++ IG+++ Y AQ
Sbjct: 905 DASSGGPNGQFESVVGTSRSNALEVEIILMLLKSFLDA--GDVRESDIGILTAYDAQKWQ 962
Query: 766 IRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALT 825
+R+K+ + + +++ S+DGFQG E+++I+ S VR N IGF+ P+R+NV LT
Sbjct: 963 LRRKVNQMF-GINAQAIEIDSVDGFQGKEKELILFSGVRSNNHKDIGFLKDPRRMNVMLT 1021
Query: 826 RARHCLWILGSERTLISSESIW 847
RAR L ++ + T+++ S W
Sbjct: 1022 RARRGLIVVADKFTIMNDISNW 1043
>gi|260950771|ref|XP_002619682.1| hypothetical protein CLUG_00841 [Clavispora lusitaniae ATCC 42720]
gi|238847254|gb|EEQ36718.1| hypothetical protein CLUG_00841 [Clavispora lusitaniae ATCC 42720]
Length = 967
Score = 144 bits (362), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 139/274 (50%), Gaps = 11/274 (4%)
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS 652
+++DE+ Q E E+ IP+ G VL+GD QL +V + AG RSLFERL S
Sbjct: 590 IVLVDESTQATEPEALIPITR-GAKQVVLVGDHQQLGPVVLDPAASAAGLRRSLFERLVS 648
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ H L +QYRMHP++S F + FY +L+G ++
Sbjct: 649 MGHVPLRLEVQYRMHPALSEFASNMFYEGSLLNGVTSDDRTRPGADFPWPVPDRPMMFWA 708
Query: 713 IGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
G+E+ + S N VE V KI+ +L + V Q IGV++PY Q V I + +
Sbjct: 709 NYGKEEIGANGSSYLNRVEAMNVDKIIARLVRDGVSPDQ---IGVITPYEGQRVYIWQYL 765
Query: 771 GFEYENK----DGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTR 826
+ V+V S+D FQG E+D II+S VR N IGF+ +R+NVALTR
Sbjct: 766 KLNSTVPKSALNELEVEVSSVDAFQGREKDYIILSCVRANEDRDIGFLKDSRRLNVALTR 825
Query: 827 ARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
A+ L ILG+ R+L S +W +L+ + R C
Sbjct: 826 AKFGLIILGNPRSL-SKNKLWNSLLVHYRERGCL 858
Score = 51.2 bits (121), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 12/82 (14%)
Query: 255 STLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACT 313
S LN SQ A+ + S + LI GPPGTGKT T + ++ L+R+ + R L C
Sbjct: 428 SALNASQRAAVAHAIA-------SPLTLIQGPPGTGKTVTSAAIVRELVRLRRSRVLVCA 480
Query: 314 PTNVAITELASRV----LKLVK 331
P+NVA+ LA ++ LK+V+
Sbjct: 481 PSNVAVDHLALKLRAAGLKVVR 502
>gi|168044414|ref|XP_001774676.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673976|gb|EDQ60491.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 911
Score = 144 bits (362), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 160/319 (50%), Gaps = 24/319 (7%)
Query: 561 VLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPL--------- 611
+L++ ++L FS A +++ + + ++IDEAAQ E + +PL
Sbjct: 519 ILDEAAIVCSTLSFSGAGVFLRMN----RGFDVVIIDEAAQAVEPSTLVPLVHGCRQVLA 574
Query: 612 -QLAGINHAVL-------IGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQ 663
++A ++ A L +GD QLPA V S + G+G S+F+RL + +L Q
Sbjct: 575 SKVAELSFASLEFHMTMQVGDPLQLPATVLSTKAVSHGYGMSMFKRLQKAGYPVKMLKTQ 634
Query: 664 YRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGR-EDFIYH 722
YRMHP I FP+ +FY + DG +V+ + + + FG Y+F +I G +
Sbjct: 635 YRMHPLIRAFPSKEFYEGALEDGDDVE-RVTSRPWHEHRCFGPYTFFDIDGEESQPPGSG 693
Query: 723 SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTV 782
S N EV V+ + + L + K ++ V+SPY QV +R++ + V
Sbjct: 694 SWVNKDEVEFVLVLYRHLVALYPELKGSPTVAVISPYKLQVKLLRQRFTEVLGKETARLV 753
Query: 783 KVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLIS 842
+ ++DGFQG E+DI I S VR G SIGF+S +R+NV LTRAR + ++G + L
Sbjct: 754 DINTVDGFQGREKDIAIFSCVRATEGKSIGFVSDFRRMNVGLTRARASMLVVGCAKAL-K 812
Query: 843 SESIWGALVCDAKARQCFF 861
+ W LV + R +
Sbjct: 813 IDKHWRNLVTSSIERHRLY 831
>gi|323507767|emb|CBQ67638.1| probable NAM7-nonsense-mediated mRNA decay protein [Sporisorium
reilianum SRZ2]
Length = 1094
Score = 144 bits (362), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 136/276 (49%), Gaps = 19/276 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DEA Q E E IPL + G V +GD QL ++ +K AG +SLFERL L
Sbjct: 641 VLVDEATQAAEPECMIPL-VMGCKQVVFVGDHLQLGPVIMNKKVARAGASQSLFERLIML 699
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-------SYEKQYLTGTEFGT 706
+ L +QYRMHP +S FP+ FY + +G + + L F
Sbjct: 700 GNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKDVDFPWPVPSLPMLFFQN 759
Query: 707 YSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
I F+ N E S V KI+ + +KA V Q IG+V+PY Q I
Sbjct: 760 LGQEEISSSGTSFL-----NRTEASNVEKIVTRFFKAGVKPSQ---IGIVTPYEGQRSYI 811
Query: 767 RKKIGFEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
+ K V+V S+D FQG E+D II+S VR N IGF+S P+R+NVAL
Sbjct: 812 VNHMQLHGSLKKELYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSDPRRLNVAL 871
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
TRAR+ L ILG+ + L + +W L+ K + C
Sbjct: 872 TRARYGLVILGNPKVL-NKHPLWHYLLVHYKEKGCL 906
Score = 50.8 bits (120), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACTPT 315
LN SQV A+ + L++ + LI GPPGTGKT T + ++ L ++ L C P+
Sbjct: 479 LNHSQVNAVKSVLQK-------PLSLIQGPPGTGKTVTSASIVYQLSKMNPGPVLVCAPS 531
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
NVA+ +L ++ LK+V+ + K ++PI
Sbjct: 532 NVAVDQLTEKIHMTGLKVVRLTAKSREALDSPI 564
>gi|405123238|gb|AFR98003.1| ATP dependent helicase [Cryptococcus neoformans var. grubii H99]
Length = 1092
Score = 144 bits (362), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 140/271 (51%), Gaps = 9/271 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E E IPL + G AVL+GD QL ++ +K + AG +SLFERL L
Sbjct: 615 VLIDEATQSAEPECMIPL-VMGCKQAVLVGDHQQLGPVIMNKKAARAGLSQSLFERLVIL 673
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
+ L +QYRMHP +S F + FY + +G + + T F +
Sbjct: 674 GNHPIRLQVQYRMHPCLSEFSSNLFYEGTLQNGVTAPERLRKNVDFPWPVADTPMFFHQN 733
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G E+ N E S V K++ K +K+ V Q IGV++PY Q I +
Sbjct: 734 LGTEEISSSGTSFLNRTEASNVEKMVTKFFKSGVLPNQ---IGVITPYEGQRSYIASYMQ 790
Query: 772 FEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
K V+V S+D FQG E+D II+S VR N IGF++ P+R+NVALTRA++
Sbjct: 791 LHGSLKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKY 850
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCF 860
+ ILG+ + L S +W L+ K + CF
Sbjct: 851 GVVILGNPKVL-SKHPLWLYLLSHYKEKGCF 880
Score = 50.1 bits (118), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 12/99 (12%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
+ Q ++F LN SQ+ A+ A L++ + LI GPPGTGKT T + ++
Sbjct: 438 RTQMPKRFAAPNLPELNHSQMSAVKAVLQK-------PLSLIQGPPGTGKTVTSASIVYH 490
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYK 335
L ++ + L C P+NVA+ L ++ LK+V+ + K
Sbjct: 491 LAKMNPGQVLVCAPSNVAVDHLCEKIHQTGLKVVRLAAK 529
>gi|315049715|ref|XP_003174232.1| ATP-dependent helicase NAM7 [Arthroderma gypseum CBS 118893]
gi|311342199|gb|EFR01402.1| ATP-dependent helicase NAM7 [Arthroderma gypseum CBS 118893]
Length = 1094
Score = 144 bits (362), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 150/277 (54%), Gaps = 21/277 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G AVL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 602 VLIDESTQSAEPECMIPLVL-GCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 660
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFG------TY 707
+ LN+QYRMHP +S F + FY + +G S E + L +F
Sbjct: 661 GCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGV-----SSEDRLLKNVDFPWPVADKPM 715
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---V 763
F + +G E S N E + V KI+ + +KA V + IG+++PY Q V
Sbjct: 716 MFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGV---KPSGIGIITPYEGQRSYV 772
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
V+ + G ++ + ++V S+D FQG E+D I++S VR N IGF+S P+R+NVA
Sbjct: 773 VSSMQLTG-TFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVA 831
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
LTRA++ L ILG+ + L S +W L+ K + C
Sbjct: 832 LTRAKYGLVILGNPKVL-SKHPLWNYLLRHFKEQNCL 867
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q ++F LN SQ+ A+ A L++ + LI GPPGTGKT T
Sbjct: 418 EVAAAPMKTQMPKQFSVPGLPGLNSSQINAVKAVLQKP-------LSLIQGPPGTGKTVT 470
Query: 295 VSMLLLTLLRIKC-RTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L ++ + L C P+NVA+ +L + LK V+ + K +P+
Sbjct: 471 SATIIYHLAKVNAGQVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVESPV 525
>gi|336263126|ref|XP_003346344.1| hypothetical protein SMAC_07821 [Sordaria macrospora k-hell]
gi|380091672|emb|CCC10804.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1093
Score = 144 bits (362), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 146/272 (53%), Gaps = 11/272 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 618 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKL 676
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
+ L +QYRMHP +S FP+ FY + +G + + + F +
Sbjct: 677 QFTPIRLKVQYRMHPCLSEFPSNMFYDGSLQNGVTAAERLRKDVDFPWPVPETPMMFWSN 736
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRK 768
+G E S N E + V KI+ + +KA V + IGV++PY Q +V +
Sbjct: 737 LGNEEISASGTSYLNRTEAANVEKIVTRFFKAGV---KPADIGVITPYEGQRSYIVNTMQ 793
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
G ++ + V+V S+D FQG E++ I++S VR N IGF+S P+R+NVALTRA+
Sbjct: 794 NTG-TFKKESYREVEVASVDAFQGREKEFIVLSCVRSNENQGIGFLSDPRRLNVALTRAK 852
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCF 860
+ L I+G+ + L E +W L+ K ++C
Sbjct: 853 YGLVIIGNPKVLCKHE-LWHHLLVHFKDKKCL 883
Score = 48.5 bits (114), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACTPT 315
LN SQ+ A+ L + + LI GPPGTGKT T + ++ L ++ + L C P+
Sbjct: 456 LNASQIAAIKQVLS-------NPLSLIQGPPGTGKTVTSATIIYHLAKMSNSQVLVCAPS 508
Query: 316 NVAITELASRV----LKLVKESYK 335
NVA+ +L R+ LK+V+ + K
Sbjct: 509 NVAVDQLCERIHRTGLKVVRLTAK 532
>gi|326479319|gb|EGE03329.1| hypothetical protein TEQG_02362 [Trichophyton equinum CBS 127.97]
Length = 1093
Score = 144 bits (362), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 150/277 (54%), Gaps = 21/277 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G AVL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 601 VLIDESTQSAEPECMIPLVL-GCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 659
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFG------TY 707
+ LN+QYRMHP +S F + FY + +G S E + L +F
Sbjct: 660 GCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGV-----SSEDRLLKNVDFPWPVADKPM 714
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---V 763
F + +G E S N E + V KI+ + +KA V + IG+++PY Q V
Sbjct: 715 MFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGV---KPSGIGIITPYEGQRSYV 771
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
V+ + G ++ + ++V S+D FQG E+D I++S VR N IGF+S P+R+NVA
Sbjct: 772 VSSMQLTG-TFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVA 830
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
LTRA++ L ILG+ + L S +W L+ K + C
Sbjct: 831 LTRAKYGLVILGNPKVL-SKHPLWNYLLRHFKEQNCL 866
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q ++F LN SQ+ A+ A L++ + LI GPPGTGKT T
Sbjct: 417 EVAAAPMKTQMPKQFSVPGLPGLNSSQINAVKAVLQKP-------LSLIQGPPGTGKTVT 469
Query: 295 VSMLLLTLLRIKC-RTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L ++ + L C P+NVA+ +L + LK V+ + K +P+
Sbjct: 470 SATIIYHLAKVNAGQVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVESPV 524
>gi|321253648|ref|XP_003192804.1| ATP-dependent RNA helicase of the SFI superfamily Nam7p
[Cryptococcus gattii WM276]
gi|317459273|gb|ADV21017.1| ATP-dependent RNA helicase of the SFI superfamily Nam7p
[Cryptococcus gattii WM276]
Length = 1097
Score = 144 bits (362), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 140/271 (51%), Gaps = 9/271 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E E IPL + G AVL+GD QL ++ +K + AG +SLFERL L
Sbjct: 615 VLIDEATQSAEPECMIPL-VMGCKQAVLVGDHQQLGPVIMNKKAARAGLSQSLFERLVIL 673
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
+ L +QYRMHP +S F + FY + +G + + T F +
Sbjct: 674 GNHPIRLQVQYRMHPCLSEFSSNLFYEGTLQNGVTAPERLRKNVDFPWPVADTPMFFHQN 733
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G E+ N E S V K++ K +K+ V Q IGV++PY Q I +
Sbjct: 734 LGTEEISSSGTSFLNRTEASNVEKMVTKFFKSGVLPNQ---IGVITPYEGQRSYIASYMQ 790
Query: 772 FEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
K V+V S+D FQG E+D II+S VR N IGF++ P+R+NVALTRA++
Sbjct: 791 LHGSLKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRMNVALTRAKY 850
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCF 860
+ ILG+ + L S +W L+ K + CF
Sbjct: 851 GVVILGNPKVL-SKHPLWLYLLSHYKEKGCF 880
Score = 50.1 bits (118), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 12/99 (12%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
+ Q ++F LN SQ+ A+ A L++ + LI GPPGTGKT T + ++
Sbjct: 438 RTQMPKRFAAPNLPELNHSQMSAVKAVLQK-------PLSLIQGPPGTGKTVTSASIVYH 490
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYK 335
L ++ + L C P+NVA+ L ++ LK+V+ + K
Sbjct: 491 LAKMNPGQVLVCAPSNVAVDHLCEKIHQTGLKVVRLAAK 529
>gi|242011006|ref|XP_002426248.1| regulator of nonsense transcripts, putative [Pediculus humanus
corporis]
gi|212510311|gb|EEB13510.1| regulator of nonsense transcripts, putative [Pediculus humanus
corporis]
Length = 1108
Score = 144 bits (362), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/262 (34%), Positives = 143/262 (54%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 626 ILIDESMQSTEPECMVPVVL-GARQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 684
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
+ L +QYRMHP +S FP+ FY + +G + + K +
Sbjct: 685 GIRPYRLEVQYRMHPELSRFPSDFFYEGSLQNGVCSEERKLAKVDFPWPANDKPMLFYVT 744
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E S V KI+ K +A + +Q IG+++PY Q + + +
Sbjct: 745 TGQEEIAGSGTSYLNRTEASNVEKIVTKFLRAGIKPEQ---IGLITPYEGQRAYLVQFMQ 801
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ +K ++V S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA++
Sbjct: 802 YQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNELLGIGFLNDPRRLNVALTRAKY 861
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S + +W L+
Sbjct: 862 GIIIIGNPKVL-SKQPLWNHLL 882
Score = 49.7 bits (117), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC-RTLACTPT 315
LN SQV A+ L+R + LI GPPGTGKT T + ++ L R L C P+
Sbjct: 464 LNRSQVYAVKQALQR-------PLSLIQGPPGTGKTVTSATIVYHLARQPTGAVLVCAPS 516
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N+A+ +L ++ LK+V+ K ++P+
Sbjct: 517 NIAVDQLTEKIHRTGLKVVRLCAKSREAIDSPV 549
>gi|58264876|ref|XP_569594.1| ATP dependent helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|57225826|gb|AAW42287.1| ATP dependent helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1090
Score = 144 bits (362), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 140/271 (51%), Gaps = 9/271 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E E IPL + G AVL+GD QL ++ +K + AG +SLFERL L
Sbjct: 615 VLIDEATQSAEPECMIPL-VMGCKQAVLVGDHQQLGPVIMNKKAARAGLSQSLFERLVIL 673
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
+ L +QYRMHP +S F + FY + +G + + T F +
Sbjct: 674 GNHPIRLQVQYRMHPCLSEFSSNLFYEGTLQNGVTAPERLRKHVDFPWPVADTPMFFHQN 733
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G E+ N E S V K++ K +K+ V Q IGV++PY Q I +
Sbjct: 734 LGTEEISSSGTSFLNRTEASNVEKMVTKFFKSGVLPNQ---IGVITPYEGQRSYIASYMQ 790
Query: 772 FEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
K V+V S+D FQG E+D II+S VR N IGF++ P+R+NVALTRA++
Sbjct: 791 LHGSLKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKY 850
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCF 860
+ ILG+ + L S +W L+ K + CF
Sbjct: 851 GVVILGNPKVL-SKHPLWLYLLSHYKEKGCF 880
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 12/99 (12%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
+ Q ++F LN SQ+ A+ A L++ + LI GPPGTGKT T + ++
Sbjct: 438 RTQMPKRFAAPNLPELNHSQMSAVKAVLQK-------PLSLIQGPPGTGKTVTSASIVYH 490
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYK 335
L ++ + L C P+NVA+ L ++ LK+V+ + K
Sbjct: 491 LAKMNPGQVLVCAPSNVAVDHLCEKIHQTGLKVVRLAAK 529
>gi|24660647|ref|NP_648177.1| CG7504, isoform C [Drosophila melanogaster]
gi|7295157|gb|AAF50482.1| CG7504, isoform C [Drosophila melanogaster]
Length = 1417
Score = 143 bits (361), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 117/361 (32%), Positives = 183/361 (50%), Gaps = 51/361 (14%)
Query: 526 YLLQLHQRRSECLSVLRNLWNSLDELNLPCTT-SKLVLEDFCFKRASLFFSTASSSYKLH 584
YLLQ Q++ + L ++ N +L+ P T + + C RA++ +T SS KL
Sbjct: 1067 YLLQQLQQKEKKLQLISN------QLSPPLTQREEFEISHMCVTRANIICTTLSSCVKLA 1120
Query: 585 SVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGR 644
+ + + ++DEA Q E + +P++ G+ H VL+GD QLPA+V SK + + G
Sbjct: 1121 NY-VDFFDICIVDEATQCTEPWTLLPMRF-GLTHMVLVGDMQQLPAVVLSKKAIDFGLSN 1178
Query: 645 SLFERL-----TSLNH--SKHL-------LNIQYRMHPSISLFPNLQFYRNQILDGANVK 690
S+F+R+ T L+ S HL L+ QYRMHP I +PN FY +Q+++
Sbjct: 1179 SMFDRIQRSLQTQLDKPGSYHLMHTKLFKLSTQYRMHPEICRWPNQYFYEDQLINA---- 1234
Query: 691 SKSYEKQYLTGTEFGTYSFINI-----IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWV 745
E + Y IN+ G ++ S N E V K+L ++ K
Sbjct: 1235 ----ECTARFASPLIPYCVINLKYTCDSNGAQN---KSISNNEEARFVAKLLTEMDKHM- 1286
Query: 746 GSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC 805
++ S G++SPY Q A+ + I + +++D +QG E+D+IIIS R
Sbjct: 1287 -PSKRFSYGLISPYQNQCYALSQVI------PSHMNITPQTVDSYQGLEKDVIIISNAR- 1338
Query: 806 NTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADE 865
T G GF++ QR+NVALTR R CL I G+ L S E +W L+ DA+ R+ +FN D
Sbjct: 1339 -TRG-CGFLTNYQRLNVALTRPRRCLVICGNFEDLKSVE-MWRNLLDDARKRKVYFNLDR 1395
Query: 866 E 866
+
Sbjct: 1396 D 1396
>gi|134109641|ref|XP_776499.1| hypothetical protein CNBC4250 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259177|gb|EAL21852.1| hypothetical protein CNBC4250 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1089
Score = 143 bits (361), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 140/271 (51%), Gaps = 9/271 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E E IPL + G AVL+GD QL ++ +K + AG +SLFERL L
Sbjct: 615 VLIDEATQSAEPECMIPL-VMGCKQAVLVGDHQQLGPVIMNKKAARAGLSQSLFERLVIL 673
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
+ L +QYRMHP +S F + FY + +G + + T F +
Sbjct: 674 GNHPIRLQVQYRMHPCLSEFSSNLFYEGTLQNGVTAPERLRKHVDFPWPVADTPMFFHQN 733
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G E+ N E S V K++ K +K+ V Q IGV++PY Q I +
Sbjct: 734 LGTEEISSSGTSFLNRTEASNVEKMVTKFFKSGVLPNQ---IGVITPYEGQRSYIASYMQ 790
Query: 772 FEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
K V+V S+D FQG E+D II+S VR N IGF++ P+R+NVALTRA++
Sbjct: 791 LHGSLKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKY 850
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCF 860
+ ILG+ + L S +W L+ K + CF
Sbjct: 851 GVVILGNPKVL-SKHPLWLYLLSHYKEKGCF 880
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 12/99 (12%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
+ Q ++F LN SQ+ A+ A L++ + LI GPPGTGKT T + ++
Sbjct: 438 RTQMPKRFAAPNLPELNHSQMSAVKAVLQK-------PLSLIQGPPGTGKTVTSASIVYH 490
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYK 335
L ++ + L C P+NVA+ L ++ LK+V+ + K
Sbjct: 491 LAKMNPGQVLVCAPSNVAVDHLCEKIHQTGLKVVRLAAK 529
>gi|328867998|gb|EGG16379.1| DNA2/NAM7 helicase family protein [Dictyostelium fasciculatum]
Length = 917
Score = 143 bits (361), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 161/306 (52%), Gaps = 23/306 (7%)
Query: 560 LVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHA 619
++L+D +L FS +S K++ +I ++IDEAAQ E+ + +P+Q
Sbjct: 540 IILDDAEIIATTLSFSGSSLLTKMNGFDI-----VIIDEAAQAVETSTLVPIQ-HKCKKI 593
Query: 620 VLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFY 679
+L+GD QLPA + S I+ + + +SLF+RL +L QYRMH +I FP+ FY
Sbjct: 594 ILVGDPKQLPATIISPIAIKYKYDQSLFQRLQE-KCPPLMLTTQYRMHSTIRQFPSRHFY 652
Query: 680 RNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYH---SCRNIVEVSAVIKI 736
+ + DG N+ ++ Y + FG F ++ RE I H S N E I +
Sbjct: 653 NDLLEDGPNIADRA--TNYHGNSFFGPLVFYDLPFARE--IKHGGGSVFNEDECFMAIYL 708
Query: 737 LQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEED 796
Q + + + IG++SPY QV+ +R+ ++N G + + ++DGFQG E +
Sbjct: 709 YQLILRTYPEQDFTGRIGIISPYRQQVLTLREF----FKNCPG--ISIDTVDGFQGRERE 762
Query: 797 IIIISTVRCNT--GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDA 854
III S VR + G IGF++ +R+NVALTR R L ++G+ +TL S W L+
Sbjct: 763 IIIFSCVRASDQEGAGIGFLADVRRMNVALTRPRSSLLVIGNAKTL-SINKDWNELIKHC 821
Query: 855 KARQCF 860
++ C
Sbjct: 822 QSNNCL 827
>gi|326436738|gb|EGD82308.1| hypothetical protein PTSG_02976 [Salpingoeca sp. ATCC 50818]
Length = 2425
Score = 143 bits (361), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 145/279 (51%), Gaps = 24/279 (8%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
++ L+IDEAAQ E + IPLQ G VL+GD QL A V S+ + +AG+ RSLFER+
Sbjct: 1888 VDLLIIDEAAQCAEPDVLIPLQY-GCARLVLVGDPMQLSATVFSQYARDAGYERSLFERI 1946
Query: 651 -TSLNH--SKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTY 707
S+ S +L QYRMHP I FPN+ FY ++L V ++ + G Y
Sbjct: 1947 HPSMRAWGSAPMLREQYRMHPEICEFPNIMFYEQKLLTAGAVLARKPAPWH---DALGAY 2003
Query: 708 SFINII------GGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTA 761
F ++ GG F N+ E V +I+ + +A + I VV+PYT
Sbjct: 2004 RFFDVSWGEQKRGGGNSFC-----NVEEAITVARIIFLIAQAAPAEPLRGKIAVVTPYTH 2058
Query: 762 QVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVN 821
Q I+ ++ + T+ V ++D +QG E D+++ S VR +GF+++ +R+N
Sbjct: 2059 QRQCIKGELARWFGPAVADTISVDTVDAYQGQESDVVVFSCVRTR---QLGFLTQEKRMN 2115
Query: 822 VALTRARHCLWILGSE---RTLISSESIWGALVCDAKAR 857
VALTRAR +I+G+ R +W LV +A+ R
Sbjct: 2116 VALTRARLSCYIVGNAYNLRQFNRETLMWSRLVANAQQR 2154
>gi|327293656|ref|XP_003231524.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
gi|326466152|gb|EGD91605.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
Length = 1093
Score = 143 bits (361), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 150/277 (54%), Gaps = 21/277 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G AVL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 601 VLIDESTQSAEPECMIPLVL-GCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 659
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFG------TY 707
+ LN+QYRMHP +S F + FY + +G S E + L +F
Sbjct: 660 GCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGV-----SSEDRLLKNVDFPWPVADKPM 714
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---V 763
F + +G E S N E + V KI+ + +KA V + IG+++PY Q V
Sbjct: 715 MFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGV---KPSGIGIITPYEGQRSYV 771
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
V+ + G ++ + ++V S+D FQG E+D I++S VR N IGF+S P+R+NVA
Sbjct: 772 VSSMQLTG-TFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVA 830
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
LTRA++ L ILG+ + L S +W L+ K + C
Sbjct: 831 LTRAKYGLVILGNPKVL-SKHPLWNYLLRHFKEQNCL 866
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q ++F LN SQ+ A+ A L++ + LI GPPGTGKT T
Sbjct: 417 EVAAAPMKTQMPKQFSVPGLPGLNSSQINAVKAVLQKP-------LSLIQGPPGTGKTVT 469
Query: 295 VSMLLLTLLRIKC-RTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L ++ + L C P+NVA+ +L + LK V+ + K +P+
Sbjct: 470 SATIIYHLAKVNAGQVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVESPV 524
>gi|302660352|ref|XP_003021856.1| hypothetical protein TRV_04033 [Trichophyton verrucosum HKI 0517]
gi|291185774|gb|EFE41238.1| hypothetical protein TRV_04033 [Trichophyton verrucosum HKI 0517]
Length = 1080
Score = 143 bits (361), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 150/277 (54%), Gaps = 21/277 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G AVL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 588 VLIDESTQSAEPECMIPLVL-GCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 646
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFG------TY 707
+ LN+QYRMHP +S F + FY + +G S E + L +F
Sbjct: 647 GCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGV-----SSEDRLLKNVDFPWPVADKPM 701
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---V 763
F + +G E S N E + V KI+ + +KA V + IG+++PY Q V
Sbjct: 702 MFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGV---KPSGIGIITPYEGQRSYV 758
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
V+ + G ++ + ++V S+D FQG E+D I++S VR N IGF+S P+R+NVA
Sbjct: 759 VSSMQLTG-TFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVA 817
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
LTRA++ L ILG+ + L S +W L+ K + C
Sbjct: 818 LTRAKYGLVILGNPKVL-SKHPLWNYLLRHFKEQNCL 853
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q ++F LN SQ+ A+ A L++ + LI GPPGTGKT T
Sbjct: 404 EVAAAPMKTQMPKQFSVPGLPGLNSSQINAVKAVLQKP-------LSLIQGPPGTGKTVT 456
Query: 295 VSMLLLTLLRIKC-RTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L ++ + L C P+NVA+ +L + LK V+ + K +P+
Sbjct: 457 SATIIYHLAKVNAGQVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVESPV 511
>gi|363740551|ref|XP_415453.3| PREDICTED: probable helicase senataxin [Gallus gallus]
Length = 2713
Score = 143 bits (361), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 156/289 (53%), Gaps = 35/289 (12%)
Query: 588 IKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLF 647
+ P + +++DEA Q E E+ IPL + N VL+GD QLP ++S + E G+G+SL
Sbjct: 2191 LDPFSCVIVDEAGQSCEVETLIPL-IHRCNKLVLVGDPRQLPPTIKSIKAQEYGYGQSLM 2249
Query: 648 ERLTSLNHSKHL----------------LNIQYRMHPSISLFPNLQFYRNQILDGANVKS 691
RL +HL L +QYRMHP I LFP+ Y +
Sbjct: 2250 ARL-----QRHLEEQVQNNLLRRLPVVQLTVQYRMHPDICLFPSSYIYDKTL----KTDK 2300
Query: 692 KSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQ--KLYKAWVGSKQ 749
+ E + + F Y ++ G E+ S N EV V++I++ K + +G ++
Sbjct: 2301 ATEENRCSSEWPFQPYLVFDVGDGHEERDKDSFSNPQEVKLVLEIIRTIKEKRKDLGLRR 2360
Query: 750 KVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG- 808
IG+++PY+AQ I++++ ++N +V ++D FQG E+D II++ VR N+
Sbjct: 2361 ---IGIITPYSAQKKKIQEELDRVFKNNSPG--EVDTVDAFQGREKDCIIVTCVRANSSK 2415
Query: 809 GSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
GSIGF++ QR+NV +TRAR L+ILG +TL+ ++ W L+ DA+ R
Sbjct: 2416 GSIGFLASLQRLNVTITRARFSLFILGRLKTLMENKD-WNKLIQDAQRR 2463
Score = 47.8 bits (112), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKCRT---------------LACTPTNVAITELASRV 326
LI GPPGTGK+KT+ LL +LR R L C P+N AI EL ++
Sbjct: 1981 LIHGPPGTGKSKTIVGLLSRVLRENTRNEKTSKKNAKIKQNRFLVCAPSNAAIDELMKKI 2040
Query: 327 LKLVKESYKRDSRSNTPICPLGDILL 352
+ KE + P+ GDI L
Sbjct: 2041 IIAFKEKCQ---NRQEPLGNCGDIKL 2063
>gi|302505946|ref|XP_003014930.1| hypothetical protein ARB_06689 [Arthroderma benhamiae CBS 112371]
gi|291178501|gb|EFE34290.1| hypothetical protein ARB_06689 [Arthroderma benhamiae CBS 112371]
Length = 1080
Score = 143 bits (361), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 150/277 (54%), Gaps = 21/277 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G AVL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 588 VLIDESTQSAEPECMIPLVL-GCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 646
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFG------TY 707
+ LN+QYRMHP +S F + FY + +G S E + L +F
Sbjct: 647 GCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGV-----SSEDRLLKNVDFPWPVADKPM 701
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---V 763
F + +G E S N E + V KI+ + +KA V + IG+++PY Q V
Sbjct: 702 MFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGV---KPSGIGIITPYEGQRSYV 758
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
V+ + G ++ + ++V S+D FQG E+D I++S VR N IGF+S P+R+NVA
Sbjct: 759 VSSMQLTG-TFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVA 817
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
LTRA++ L ILG+ + L S +W L+ K + C
Sbjct: 818 LTRAKYGLVILGNPKVL-SKHPLWNYLLRHFKEQNCL 853
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q ++F LN SQ+ A+ A L++ + LI GPPGTGKT T
Sbjct: 404 EVAAAPMKTQMPKQFSVPGLPGLNSSQINAVKAVLQKP-------LSLIQGPPGTGKTVT 456
Query: 295 VSMLLLTLLRIKC-RTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L ++ + L C P+NVA+ +L + LK V+ + K +P+
Sbjct: 457 SATIIYHLAKVNAGQVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVESPV 511
>gi|221330969|ref|NP_001137907.1| CG7504, isoform B [Drosophila melanogaster]
gi|220902511|gb|ACL83262.1| CG7504, isoform B [Drosophila melanogaster]
Length = 1676
Score = 143 bits (361), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 117/361 (32%), Positives = 183/361 (50%), Gaps = 51/361 (14%)
Query: 526 YLLQLHQRRSECLSVLRNLWNSLDELNLPCTT-SKLVLEDFCFKRASLFFSTASSSYKLH 584
YLLQ Q++ + L ++ N +L+ P T + + C RA++ +T SS KL
Sbjct: 1326 YLLQQLQQKEKKLQLISN------QLSPPLTQREEFEISHMCVTRANIICTTLSSCVKLA 1379
Query: 585 SVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGR 644
+ + + ++DEA Q E + +P++ G+ H VL+GD QLPA+V SK + + G
Sbjct: 1380 NY-VDFFDICIVDEATQCTEPWTLLPMRF-GLTHMVLVGDMQQLPAVVLSKKAIDFGLSN 1437
Query: 645 SLFERL-----TSLNH--SKHL-------LNIQYRMHPSISLFPNLQFYRNQILDGANVK 690
S+F+R+ T L+ S HL L+ QYRMHP I +PN FY +Q+++
Sbjct: 1438 SMFDRIQRSLQTQLDKPGSYHLMHTKLFKLSTQYRMHPEICRWPNQYFYEDQLINA---- 1493
Query: 691 SKSYEKQYLTGTEFGTYSFINI-----IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWV 745
E + Y IN+ G ++ S N E V K+L ++ K
Sbjct: 1494 ----ECTARFASPLIPYCVINLKYTCDSNGAQN---KSISNNEEARFVAKLLTEMDKHMP 1546
Query: 746 GSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC 805
++ S G++SPY Q A+ + I + +++D +QG E+D+IIIS R
Sbjct: 1547 S--KRFSYGLISPYQNQCYALSQVIP------SHMNITPQTVDSYQGLEKDVIIISNAR- 1597
Query: 806 NTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADE 865
T G GF++ QR+NVALTR R CL I G+ L S E +W L+ DA+ R+ +FN D
Sbjct: 1598 -TRG-CGFLTNYQRLNVALTRPRRCLVICGNFEDLKSVE-MWRNLLDDARKRKVYFNLDR 1654
Query: 866 E 866
+
Sbjct: 1655 D 1655
>gi|296089913|emb|CBI39732.3| unnamed protein product [Vitis vinifera]
Length = 332
Score = 143 bits (361), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 129/242 (53%), Gaps = 4/242 (1%)
Query: 622 IGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRN 681
+GD QLPA V S I+++ G+G SLF+R + +L QYRMHP I FP+ +FY
Sbjct: 18 VGDPVQLPATVISPIAEKFGYGMSLFKRFQRAGYPVQMLKTQYRMHPEIRSFPSKEFYDE 77
Query: 682 QILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCR--NIVEVSAVIKILQK 739
+ DG +VK ++ + + FG + F +I G+E S N+ EV V+ + K
Sbjct: 78 ALEDGPDVKDQTV-RLWHDYRCFGPFCFFDIHEGKESQPSGSGSWVNVDEVEFVLLMYHK 136
Query: 740 LYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIII 799
L + K + ++SPY QV R++ + + V + ++DGFQG E+D+ I
Sbjct: 137 LVTRYPELKSSSRLAIISPYRHQVKLFRERFQDTFGVESDKVVDINTVDGFQGREKDVAI 196
Query: 800 ISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQC 859
S VR + IGF++ +R+NV +TRAR + ++GS TL E W L+ A+ R C
Sbjct: 197 FSCVRASKDKGIGFVADFRRMNVGITRARASVLVVGSASTLKKDEH-WNNLLESAEKRNC 255
Query: 860 FF 861
Sbjct: 256 LL 257
>gi|50286349|ref|XP_445603.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524908|emb|CAG58514.1| unnamed protein product [Candida glabrata]
Length = 964
Score = 143 bits (361), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 144/277 (51%), Gaps = 21/277 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
++IDE+ Q E E IP+ + G +L+GD QL P ++E K SD AG +SLFERL S
Sbjct: 568 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKASD-AGLKQSLFERLIS 625
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L H L +QYRM+P +S FP+ FY + +G + ++ G
Sbjct: 626 LGHIPIRLEVQYRMNPFLSEFPSNMFYEGSLQNGVTEEQRTLANSTFPWPINGIPMMFWA 685
Query: 713 IGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
G E+ + S N E +I+ +L++ V +Q IGV++PY Q +
Sbjct: 686 NYGSEEMSANGTSYLNRTEAMNCERIITRLFRDGVKPEQ---IGVITPYEGQRAYV---- 738
Query: 771 GFEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
+Y +G V+V S+D FQG E+D II+S VR N IGF+ P+R+NV
Sbjct: 739 -LQYMQMNGALDKELYSNVEVASVDAFQGREKDFIILSCVRANEQQMIGFLRDPRRLNVG 797
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
LTRA++ L ILG+ R+L S ++W L+ + + C
Sbjct: 798 LTRAKYGLIILGNPRSL-SRNTLWNHLLLHFRQKGCL 833
Score = 51.2 bits (121), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 12/86 (13%)
Query: 255 STLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACT 313
+ LN SQ A+ L+R + LI GPPGTGKT T + ++ L +I K R L C
Sbjct: 406 TKLNASQSKAVEHVLQR-------PLSLIQGPPGTGKTVTSASIVYHLSKIRKDRILVCA 458
Query: 314 PTNVAITELASRV----LKLVKESYK 335
P+N+A+ LA+++ LK+V+ + K
Sbjct: 459 PSNIAVDHLAAKLRDLGLKVVRVTAK 484
>gi|326469176|gb|EGD93185.1| ATP-dependent DNA helicase [Trichophyton tonsurans CBS 112818]
Length = 1064
Score = 143 bits (361), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 150/277 (54%), Gaps = 21/277 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G AVL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 572 VLIDESTQSAEPECMIPLVL-GCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVIL 630
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFG------TY 707
+ LN+QYRMHP +S F + FY + +G S E + L +F
Sbjct: 631 GCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGV-----SSEDRLLKNVDFPWPVADKPM 685
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---V 763
F + +G E S N E + V KI+ + +KA V + IG+++PY Q V
Sbjct: 686 MFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGV---KPSGIGIITPYEGQRSYV 742
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
V+ + G ++ + ++V S+D FQG E+D I++S VR N IGF+S P+R+NVA
Sbjct: 743 VSSMQLTG-TFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVA 801
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
LTRA++ L ILG+ + L S +W L+ K + C
Sbjct: 802 LTRAKYGLVILGNPKVL-SKHPLWNYLLRHFKEQNCL 837
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q ++F LN SQ+ A+ A L++ + LI GPPGTGKT T
Sbjct: 388 EVAAAPMKTQMPKQFSVPGLPGLNSSQINAVKAVLQKP-------LSLIQGPPGTGKTVT 440
Query: 295 VSMLLLTLLRIKC-RTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L ++ + L C P+NVA+ +L + LK V+ + K +P+
Sbjct: 441 SATIIYHLAKVNAGQVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVESPV 495
>gi|162606520|ref|XP_001713290.1| hypothetical protein GTHECHR2082 [Guillardia theta]
gi|12580756|emb|CAC27074.1| sen1 [Guillardia theta]
Length = 692
Score = 143 bits (361), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 120/375 (32%), Positives = 179/375 (47%), Gaps = 38/375 (10%)
Query: 512 SVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCF---- 567
++DE +S YL Q + L + N LD ++ T S + L D F
Sbjct: 286 AIDENLSRMLFGIPYLYQNNLNNPRLLRLGPNYNKYLDHISFE-TLSLIKLSDIDFENKF 344
Query: 568 ----------KRA-----SLFFST-ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPL 611
KR+ SL F+T A S+Y L + + +L+IDEAAQ E S IP+
Sbjct: 345 KFSNFNIINLKRSIINTGSLIFTTLACSNYHLIN-NLTSKQYLIIDEAAQSIELSSLIPI 403
Query: 612 QLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSIS 671
+ + +L+GD QLPA V SK + G+ RSL +R + L IQYRMHP IS
Sbjct: 404 K-KYTHRIILVGDIHQLPATVFSKSAIAFGYNRSLLKRFQLNRYPTLFLGIQYRMHPQIS 462
Query: 672 LFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCR-----N 726
FP +FY+N + D V S Q F F +II G E+ YH+ N
Sbjct: 463 SFPARKFYKNNLKDSWKVSKISNFHQLRC---FSPLIFFDIIDGVEN--YHTDNHFSWCN 517
Query: 727 IVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKS 786
+ E+ I + + + + +++IG +S Y+ Q+ +R + +K ++ +
Sbjct: 518 LDEIR-FINLYFRSIICLISNLNELTIGFISGYSGQIEEMRDILS---NSKIKLNEQIST 573
Query: 787 IDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESI 846
ID FQG E+DI+ S VR IGF++ +R+NVA TRA+ WI G+ +L +S
Sbjct: 574 IDSFQGKEKDILFFSCVRSKIERGIGFLADGRRINVAFTRAKLGFWIFGNSFSL-RKDSN 632
Query: 847 WGALVCDAKARQCFF 861
W V D K R +F
Sbjct: 633 WNETVFDFKIRNNYF 647
Score = 47.4 bits (111), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 24/106 (22%)
Query: 239 VQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSML 298
+ R +DE ++ N++Q L+C++ H + LI GPPGTGKT+T+ +
Sbjct: 197 ILRNSFFDECIDRHYNLHFNKNQ----LSCIKDFQNNH---ITLIQGPPGTGKTRTILGI 249
Query: 299 LLTLLRIKCR-----------------TLACTPTNVAITELASRVL 327
L L K + + C P+N AI E SR+L
Sbjct: 250 LAILFEEKKKYGIKLKISVDKKKQNDQVIICAPSNAAIDENLSRML 295
>gi|452987990|gb|EME87745.1| hypothetical protein MYCFIDRAFT_148374 [Pseudocercospora fijiensis
CIRAD86]
Length = 1091
Score = 143 bits (360), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 147/273 (53%), Gaps = 13/273 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 614 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVVL 672
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
+ L +QYRMHP +S FP+ FY + +G ++ + + + F +
Sbjct: 673 GCAPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGITMQQRLRKDVDFPWPVADSPMMFWSN 732
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ----VVAIR 767
+G E S N E V KI+ + +KA V +IG+++PY Q V +++
Sbjct: 733 LGNEEISASGTSYLNRTEAQNVEKIVTRFFKAGVSPS---AIGIITPYEGQRSYVVQSMQ 789
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ F+ E+ ++V S+D FQG E+D I++S VR N IGF+S P+R+NVALTRA
Sbjct: 790 QTGTFKKEHYK--EIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRA 847
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCF 860
++ ILG+ + L S +W L+ K R C
Sbjct: 848 KYGCVILGNPKVL-SKHPLWHYLLLHFKERNCL 879
Score = 50.8 bits (120), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 14/92 (15%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPT 315
LN SQ+ A+ + L++ + LI GPPGTGKT T + ++ L ++ + L C P+
Sbjct: 452 LNGSQINAVKSVLQKP-------LSLIQGPPGTGKTVTSATIIYHLSKMNGGQVLVCAPS 504
Query: 316 NVAITELASRV----LKLVKESYK--RDSRSN 341
NVA+ +L R+ LK+V+ + K D+ SN
Sbjct: 505 NVAVDQLCERIHITGLKVVRVTAKSREDAESN 536
>gi|440295047|gb|ELP87976.1| nonsense-mediated mRNA decay protein, putative [Entamoeba invadens
IP1]
Length = 943
Score = 143 bits (360), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 143/265 (53%), Gaps = 17/265 (6%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
++ +++DE+ Q +E E + + + L+GD CQL ++ SK + + G G +F RL
Sbjct: 573 IDTVLVDESTQAEEPEVLVCF-MNSVRQIFLVGDHCQLGPVLNSKDARKYGLGLPMFSRL 631
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF----GT 706
L H + L QYRMHP++S F + FY + +G + E+Q+ + F
Sbjct: 632 LQLGHEPYRLQFQYRMHPALSEFSSHTFYDGVLQNGVT----ALERQFNSLKRFWFVQNR 687
Query: 707 YSFINIIGGREDF--IYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVV 764
G+E F S N EV+ + I+ K+ V +Q IGV++PY AQ
Sbjct: 688 PMMFVATAGKESFGSTATSYLNDEEVTVIRDIIVKMIDCGVSPEQ---IGVITPYIAQKQ 744
Query: 765 AIRKKIGFEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNV 822
AIR ++ + E +++ S+D FQG E+D II STVR N+ IGF+ PQR+NV
Sbjct: 745 AIRVRLTKDTELGVNVMNAIEIASVDSFQGREKDFIIFSTVRSNSTNEIGFLKNPQRLNV 804
Query: 823 ALTRARHCLWILGSERTLISSESIW 847
++TRA++ L ++G+ TL SS+ +W
Sbjct: 805 SITRAKYGLVVVGNPSTL-SSDPLW 828
Score = 43.5 bits (101), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 33/185 (17%)
Query: 184 QVHDKTKKSFFFIYLTNILPNKRIWNSLHMCG------NWKVITQVLGTDSVVDERCELC 237
Q H+ K S F +++ +P KR +L M G ++ ++ L + + +
Sbjct: 318 QQHNAMKFSICFQWMS--IPFKRKKTALQMFGESEEPHDFPTMSSYLRNRLLGMPKNPMD 375
Query: 238 SVQRKGQWDEKFG-----PSFSS-------TLNESQVGAMLACLRRLDCGHRSGVELIWG 285
V K DEK P+ S TLN+ Q ++ + + LI G
Sbjct: 376 MVYEKDFKDEKEAYLAQHPTLQSMNAPNLPTLNQVQYEVVMKSFTQ-------SLSLIQG 428
Query: 286 PPGTGKTKTVSMLLLTLLRIKC--RTLACTPTNVAITELASRV----LKLVKESYKRDSR 339
PPGTGKT T + ++ + + L C P+N+A+ +LA+++ +K+++ K
Sbjct: 429 PPGTGKTVTSATIIYHAVHSNPGKKVLVCAPSNIAVDQLAAKIVDTGVKVIRVFGKGRES 488
Query: 340 SNTPI 344
N P+
Sbjct: 489 ENEPL 493
>gi|429963217|gb|ELA42761.1| hypothetical protein VICG_00076, partial [Vittaforma corneae ATCC
50505]
Length = 812
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 156/283 (55%), Gaps = 19/283 (6%)
Query: 570 ASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLP 629
AS+ +T SSS S+ + + ++IDEA Q E + IP + N ++IGD QLP
Sbjct: 526 ASVICATLSSSVS-DSICLSKFDLIIIDEACQATELSTIIPFKY-NPNKVIMIGDPNQLP 583
Query: 630 AMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANV 689
V ISD++ SLFERL S +H +L++QYRMHP I +L FY N+I A++
Sbjct: 584 PTV---ISDQSQLQVSLFERLLS-HHQPVMLDVQYRMHPDICKLSSLFFYDNRIETFADI 639
Query: 690 KSKSYEKQYLTGTEFGTYSFINIIGGREDF-IYHSCRNIVEVSAVIKILQKLYKAWVGSK 748
+ Y F +FI+I+ +E + S N VE S +I ++L++ + +
Sbjct: 640 AQLRRKSGYGDIYGFRPLNFIDILVKQEKIDDFKSYYNPVECSICYRISKELFRRYGNT- 698
Query: 749 QKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG 808
+ I V++PY Q + K N + +++ +IDGFQG E D++I+STVR
Sbjct: 699 --LKIAVLTPYKGQANMLMKN-----RNYEKMGIEINTIDGFQGKECDVVILSTVR---R 748
Query: 809 GSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
+GF +R+NVA+TR+R CL +LG+++ L S S+W ++
Sbjct: 749 FGLGFTCDFRRINVAMTRSRVCLILLGNKKCL-SQSSVWSGII 790
>gi|398398643|ref|XP_003852779.1| hypothetical protein MYCGRDRAFT_41426, partial [Zymoseptoria tritici
IPO323]
gi|339472660|gb|EGP87755.1| hypothetical protein MYCGRDRAFT_41426 [Zymoseptoria tritici IPO323]
Length = 1778
Score = 142 bits (358), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 145/275 (52%), Gaps = 8/275 (2%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL-TS 652
++IDEAAQ E S IPL+ G +++GD QLP V SK + + +SLF R+ +
Sbjct: 1502 VIIDEAAQCVEMSSLIPLKY-GCVKCIMVGDPKQLPPTVFSKEAARFQYEQSLFVRMQNN 1560
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ HLL+ QYRMHP IS FP+ FY +++ DG+N+ + +K + Y F ++
Sbjct: 1561 FPNEVHLLDTQYRMHPDISAFPSATFYDHKLKDGSNMAALR-KKSWHASNLLAPYRFYDV 1619
Query: 713 IGGREDFIYH-SCRNIVEVSAVIKILQKLYKAWVGSKQKVS--IGVVSPYTAQVVAIRKK 769
G S N EV + + +L + GS S IG+++PY +Q+ +RKK
Sbjct: 1620 KGQHSAAPKGFSLVNHAEVEVAMALYSRLTTDF-GSTYDFSNRIGIITPYKSQLELLRKK 1678
Query: 770 IGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+ + V+ + D FQG E +III S VR + G +GF+ +R+NV LTRA+
Sbjct: 1679 FSTAFGLEILEKVEFNTTDAFQGREAEIIIFSCVRASDKGGVGFLQDIRRMNVGLTRAKC 1738
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
LW+LG+ +L S W L+ D + + D
Sbjct: 1739 SLWVLGNSESL-SRGQYWRLLIEDVERKGAMVKGD 1772
>gi|283046856|gb|ADB04944.1| MIP14162p [Drosophila melanogaster]
Length = 317
Score = 142 bits (358), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 164/321 (51%), Gaps = 44/321 (13%)
Query: 565 FCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGD 624
C RA++ +T SS KL + + + ++DEA Q E + +P++ G+ H VL+GD
Sbjct: 1 MCVTRANIICTTLSSCVKLANY-VDFFDICIVDEATQCTEPWTLLPMRF-GLTHMVLVGD 58
Query: 625 ECQLPAMVESKISDEAGFGRSLFERL-----TSLNH--SKHL-------LNIQYRMHPSI 670
QLPA+V SK + + G S+F+R+ T L+ S HL L+ QYRMHP I
Sbjct: 59 MQQLPAVVLSKKAIDFGLSNSMFDRIQRSLQTQLDKPGSYHLMHTKLFKLSTQYRMHPEI 118
Query: 671 SLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI-----IGGREDFIYHSCR 725
+PN FY +Q+++ E + Y IN+ G ++ S
Sbjct: 119 CRWPNQYFYEDQLINA--------ECTARFASPLIPYCVINLKYTCDSNGAQN---KSIS 167
Query: 726 NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVK 785
N E V K+L ++ K ++ S G++SPY Q A+ + I + +
Sbjct: 168 NNEEARFVAKLLTEMDKHM--PSKRFSYGLISPYQNQCYALSQVI------PSHMNITPQ 219
Query: 786 SIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSES 845
++D +QG E+D+IIIS R T G GF++ QR+NVALTR R CL I G+ L S E
Sbjct: 220 TVDSYQGLEKDVIIISNAR--TRGC-GFLTNYQRLNVALTRPRRCLVICGNFEDLKSVE- 275
Query: 846 IWGALVCDAKARQCFFNADEE 866
+W L+ DA+ R+ +FN D +
Sbjct: 276 MWRNLLDDARKRKVYFNLDRD 296
>gi|357473853|ref|XP_003607211.1| hypothetical protein MTR_4g074550 [Medicago truncatula]
gi|355508266|gb|AES89408.1| hypothetical protein MTR_4g074550 [Medicago truncatula]
Length = 371
Score = 142 bits (358), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 118/200 (59%), Gaps = 5/200 (2%)
Query: 903 EFVKAFRSINLIHKVLNSLGRFDELLMLENGSGNFMEAA-NMAVLEGDIFLATDLLQKAW 961
+FV+AF SI+L L SL DELL LE SGNFMEAA N+A GDI DLL KA
Sbjct: 175 KFVRAFHSIDLKRGFLQSLNLPDELLELEEESGNFMEAAVNIAKTMGDILREADLLGKAG 234
Query: 962 NFREASKLVLNFVFSNSLWSPGSRGWPLKQFTQKEELLQKAKSLAKNDSNQFYEFVCAEA 1021
F +A +LV +VF+ SLWS GS+ WPLKQFTQK LL KA + AK S+ FYE +
Sbjct: 235 EFLDAYELVFFYVFAKSLWSGGSKAWPLKQFTQKAGLLGKALTFAKEVSSSFYELASTKV 294
Query: 1022 NILSNDHSNLVMMNQQFIDSKRHQNIRGEILSSRMILDFHLHSNASTYHWEDELVLNLTT 1081
LSN H N+ + Q S+ H +IRGEIL +LD H N+S Y W+D +
Sbjct: 295 E-LSNKHDNIFEIVNQLKSSRIHSSIRGEILCLWELLDSHFRLNSSKYVWQDSM---FDV 350
Query: 1082 YSDDRICKSQVSIETFVYFW 1101
+ I K+Q+S+ET W
Sbjct: 351 SVEGMIMKNQLSVETLFCCW 370
>gi|145353676|ref|XP_001421132.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145357229|ref|XP_001422823.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581368|gb|ABO99425.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583067|gb|ABP01182.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 553
Score = 142 bits (358), Expect = 2e-30, Method: Composition-based stats.
Identities = 99/293 (33%), Positives = 154/293 (52%), Gaps = 13/293 (4%)
Query: 567 FKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDEC 626
RASL F T +S+ + ++ + LV+DEAAQ E E IP L A+L+GD
Sbjct: 256 LNRASLVFCTLASAGQSIMSSLEQPDALVVDEAAQALEPEIAIPF-LRYPRKALLVGDPA 314
Query: 627 QLPAMVESKISDEAGFGRSLFERLTSLNHSK-HLLNIQYRMHPSISLFPNLQFYRNQILD 685
QLPA + S+I+ G SL ERL S N + LL+ QYRMHPSI+ +P QFY ++ +
Sbjct: 315 QLPATLISEIARRHGHATSLMERLMSANAERASLLDTQYRMHPSIASWPAAQFYGGRLAN 374
Query: 686 GANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWV 745
+V +++ + + +Y+F+++ + S N E +++ L
Sbjct: 375 ADHVLTRNLPQGL--SSSVPSYAFVDVASVESGGVGKSKWNQREADVACALIRALKT--- 429
Query: 746 GSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC 805
+ + ++ Y+AQV AI + + + V V S+D FQG E D+++ S VR
Sbjct: 430 -KSPTLFVVCITFYSAQVRAIARAL----QRAGVRDVAVHSVDSFQGSEADVVVCSAVRS 484
Query: 806 NTGGSIGFISKPQRVNVALTRARHCLWILGSERTLIS-SESIWGALVCDAKAR 857
N ++GF+S +R+NVALTRA++ +LGS TL +LV DA AR
Sbjct: 485 NAKANVGFLSDKRRLNVALTRAKYSSIVLGSRDTLSRCGVDALRSLVEDAAAR 537
Score = 46.6 bits (109), Expect = 0.14, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 15/119 (12%)
Query: 275 GHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESY 334
GH ++++ GPPG GKT + LL L K R L C P+N A+ +V E Y
Sbjct: 80 GHFDQLQMVQGPPGCGKTHFIVSLLAVLAAKKQRVLVCAPSNKAVC--------VVMELY 131
Query: 335 KRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFAPLSGWRHCFSS 393
R + C +L G +D L+ + ++Y I C S +R F S
Sbjct: 132 LRTCGEDAAPC-----VLTGAEDTLREASSVDGGAMDYFI--FERCNVIASSFRRSFVS 183
>gi|301092662|ref|XP_002997185.1| nonsense transcript regulator [Phytophthora infestans T30-4]
gi|262111572|gb|EEY69624.1| nonsense transcript regulator [Phytophthora infestans T30-4]
Length = 687
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 142/267 (53%), Gaps = 17/267 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL--T 651
++IDEA Q E E IP+ + G H V++GD QL +V +K + +AG SLF+RL +
Sbjct: 266 VLIDEATQATEPECLIPI-VQGAKHVVMVGDHRQLGPVVMNKKAAKAGLNNSLFDRLVKS 324
Query: 652 SLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
H L +QYRMHP +S FP+ +FY + +G + +F
Sbjct: 325 DTKHRPFRLRVQYRMHPFLSEFPSNEFYEGDLQNGVAASERQLSSVDFPWPNPNKPTFFY 384
Query: 712 IIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAI 766
I G E+ N E S V KI+ KA V Q IGV++PY Q VV+
Sbjct: 385 ICLGAEEISSSGTSYLNRTEASNVEKIVTTFLKAGVLPSQ---IGVITPYEGQRAYVVSY 441
Query: 767 RKKIGFEYEN--KDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
++ G KD V+V S+D FQG E+D+II+S VR N IGF+S +R+NVAL
Sbjct: 442 MQRNGPLRSQLYKD---VEVASVDSFQGREKDLIILSCVRSNENQGIGFLSDERRLNVAL 498
Query: 825 TRARHCLWILGSERTLISSESIWGALV 851
TRA++ + +LG+ R L + +++W L+
Sbjct: 499 TRAKYGVILLGNPRVL-AKQTLWNKLL 524
>gi|321463387|gb|EFX74403.1| hypothetical protein DAPPUDRAFT_57163 [Daphnia pulex]
Length = 1129
Score = 142 bits (357), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 143/272 (52%), Gaps = 29/272 (10%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 613 ILIDESMQATEPECMVPVVL-GARQLILVGDHCQLGPVVMCKPAAKAGLSQSLFERLVVL 671
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF-----GTYS 708
L +QYRMHP +S FP+ FY + +G E + L G +F
Sbjct: 672 GIRPFRLEVQYRMHPRLSEFPSNFFYEGSLQNGV-----CAEDRILRGVDFPWPMPDRPM 726
Query: 709 FINIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
F + G+E+ S N E S V KI + ++ V +Q IG+++PY Q +
Sbjct: 727 FFYVTLGQEEIAGSGTSYLNRTEASNVEKIATRFLRSGVKPEQ---IGIITPYEGQRAYL 783
Query: 767 RKKIGFEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQR 819
+Y G +++ S+D FQG E+D+II+S VR N IGF++ P+R
Sbjct: 784 -----VQYMQHQGSLHAKLYQDIEIASVDAFQGREKDLIIMSCVRSNENQGIGFLNDPRR 838
Query: 820 VNVALTRARHCLWILGSERTLISSESIWGALV 851
+NVA+TRAR+ + I+G+ + L + + +W L+
Sbjct: 839 LNVAMTRARYGIIIVGNPKVL-AKQPVWNHLL 869
Score = 48.1 bits (113), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC-RTLACTPT 315
LN SQV A+ ++R + LI GPPGTGKT T + ++ L ++ L C P+
Sbjct: 451 LNRSQVFAVKQAVQR-------PLTLIQGPPGTGKTVTSATIVYHLAKLGSGPVLVCAPS 503
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N+A+ +L ++ LK+V+ K ++P+
Sbjct: 504 NIAVDQLTEKIHRTGLKVVRLCAKSREAIDSPV 536
>gi|195446723|ref|XP_002070897.1| GK25498 [Drosophila willistoni]
gi|194166982|gb|EDW81883.1| GK25498 [Drosophila willistoni]
Length = 1208
Score = 142 bits (357), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 146/271 (53%), Gaps = 10/271 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 619 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 677
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + + + + F+ +
Sbjct: 678 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFL-VT 736
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E + V KI + KA V +Q IG+++PY Q + + +
Sbjct: 737 QGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGVKPEQ---IGIITPYEGQRAYLVQYMQ 793
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ ++ +++ S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA++
Sbjct: 794 YQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKY 853
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCF 860
+ I+G+ + L S + +W L+ K R+
Sbjct: 854 GIIIVGNPKVL-SKQQLWNHLLNFYKDRKVL 883
Score = 49.7 bits (117), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRT-LACTPT 315
LN SQV A+ L+R + LI GPPGTGKT T + ++ L++ T L C P+
Sbjct: 457 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQHGGTVLVCAPS 509
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ K ++P+
Sbjct: 510 NTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPV 542
>gi|82915224|ref|XP_729015.1| nonsense mRNA reducing factor 1 [Plasmodium yoelii yoelii 17XNL]
gi|23485801|gb|EAA20580.1| nonsense mRNA reducing factor 1-related [Plasmodium yoelii yoelii]
Length = 1297
Score = 142 bits (357), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 140/267 (52%), Gaps = 19/267 (7%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
N ++IDEA Q E E +P+ + G VL+GD CQL ++ K + +G G+SLFERL
Sbjct: 828 FNQVLIDEATQSTEPECLVPI-VTGAKQIVLVGDHCQLGPIIVCKKAASSGLGKSLFERL 886
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFI 710
L + L +QYRMHP +S FP+ FY + +G +K + Y + F
Sbjct: 887 VMLGITPFRLEVQYRMHPCLSEFPSYVFYDGCLQNGITLKEREYPLKNFPWPNSKYPMFF 946
Query: 711 NIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI-- 766
G E+ S N E + +++ L A + + Q IGV++PY Q I
Sbjct: 947 YNSNGLEEMSASGTSYLNRNEAQNMEVLVRALLNAGLKATQ---IGVITPYEGQRAYITS 1003
Query: 767 --RKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
+K I +++ ++V S+D FQG E+D I++S VR N IGF++ P+R+NVAL
Sbjct: 1004 LFQKNISYQH----CLDIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVAL 1059
Query: 825 TRARHCLWILGSERTL-----ISSESI 846
TRA++ L I G+ + L IS E I
Sbjct: 1060 TRAKYGLIICGNAKVLSRQHFISKEKI 1086
Score = 53.1 bits (126), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 255 STLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC--RTLAC 312
+ LN SQ+ A+ L S + LI GPPGTGKT T + L+ + + K + L
Sbjct: 664 APLNHSQIDAIKKSLN-------SPLSLIQGPPGTGKTLTCATLVYHMHKTKMGGKVLVT 716
Query: 313 TPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRL 359
P+NVA+ +L+ R+ + + + +RS + + D L N+ +L
Sbjct: 717 APSNVAVDQLSVRIHRTGLKVVRLCARSRESVSSIADYLYLHNQVKL 763
>gi|50551471|ref|XP_503209.1| YALI0D23881p [Yarrowia lipolytica]
gi|49649077|emb|CAG81409.1| YALI0D23881p [Yarrowia lipolytica CLIB122]
Length = 964
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 161/303 (53%), Gaps = 20/303 (6%)
Query: 567 FKRASLFFSTASSS--YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGD 624
++A + T S++ +KL ++ + ++IDE Q E E IPL + G V +GD
Sbjct: 559 IRKAEVICCTCSTAGNFKLQNLT---FSAVLIDEVTQASEPECLIPL-VHGCKQVVFVGD 614
Query: 625 ECQL-PAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQI 683
QL P ++ SK ++ AG +SLFERL + H L +QYRMHPS+S FP+ FY +
Sbjct: 615 HQQLGPVILNSKAAN-AGLNKSLFERLILIGHVPIRLMVQYRMHPSLSEFPSNMFYEGSL 673
Query: 684 LDGANVKSK--SYEKQYLTGTEFGTYSFINIIGGREDFIYH--SCRNIVEVSAVIKILQK 739
+G S+ Y + + N+ G+E+ S N E + +I+ +
Sbjct: 674 QNGVTTASRVLKYVDFPWPQPQHPMLFWSNL--GQEEISASGTSFLNRTEAANCERIVTR 731
Query: 740 LYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGF--TVKVKSIDGFQGGEEDI 797
L+K V Q IGVV+PY Q + + + + V+V+S+D FQG E+D
Sbjct: 732 LFKCGVAPDQ---IGVVTPYEGQRAYVTQYMVSSGSVDEAMYKGVEVQSVDAFQGREKDF 788
Query: 798 IIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
II++ VR + G IGF+S P+R+NVALTRA++ L ILG+ L + +W L+ +++
Sbjct: 789 IILTCVRSSKTGGIGFLSDPRRLNVALTRAKYGLIILGNPHVL-ARHPLWLHLITYFRSK 847
Query: 858 QCF 860
+C
Sbjct: 848 RCL 850
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 14/87 (16%)
Query: 247 EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK 306
E+F S + LN SQV A+ LRR LI GPPGTGKT + ++ L I+
Sbjct: 406 EQFSISGFNELNVSQVNAVKQVLRR-------PFSLIQGPPGTGKTVVSTTIIYHLANIR 458
Query: 307 -------CRTLACTPTNVAITELASRV 326
+ L C P+NVA+ +LA R+
Sbjct: 459 RQNPEKGSKILVCAPSNVAVDQLAERI 485
>gi|168016276|ref|XP_001760675.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688035|gb|EDQ74414.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1610
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 134/266 (50%), Gaps = 9/266 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DE+ Q E E IPL L G VL+GD CQL ++ K + AG +SLFERL L
Sbjct: 910 VLVDESTQATEPECLIPLVL-GAKQLVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 968
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHPS+S FP+ FY + +G + + F +
Sbjct: 969 GVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTTSDRLLSQIDFPWPVPNRPMFFYVQ 1028
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E V KI+ K+ V Q IGV++PY Q I +
Sbjct: 1029 MGQEEISASGTSYLNRGEAGNVEKIVTTFLKSGVVPAQ---IGVITPYEGQRAYIVNNMA 1085
Query: 772 FEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+ ++V S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR
Sbjct: 1086 RNGSLRQQLYKEIEVASVDSFQGREKDFIIVSCVRSNEHQGIGFLNDPRRLNVALTRARF 1145
Query: 830 CLWILGSERTLISSESIWGALVCDAK 855
+ ILG+ + L S + +W L+ K
Sbjct: 1146 GIVILGNPKVL-SKQPLWNTLLTHYK 1170
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 12/102 (11%)
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-K 306
+FG LN SQV A+ + L++ V LI GPPGTGKT T + ++ L + +
Sbjct: 737 RFGAPGLPELNASQVYAVKSVLQKP-------VSLIQGPPGTGKTVTSAAIVYHLAKQGQ 789
Query: 307 CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ L C P+NVA+ +LA ++ LK+V+ K ++P+
Sbjct: 790 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 831
>gi|284167544|ref|YP_003405822.1| Superfamily I DNA and RNA helicase and helicase subunits-like
protein [Haloterrigena turkmenica DSM 5511]
gi|284017199|gb|ADB63149.1| Superfamily I DNA and RNA helicase and helicase subunits-like
protein [Haloterrigena turkmenica DSM 5511]
Length = 752
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/303 (34%), Positives = 152/303 (50%), Gaps = 30/303 (9%)
Query: 548 LDELNLPCTTSKLVLEDF--CFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKES 605
L +N +++ +V E + C RA + +T SS+ L + + LV+DEA Q +
Sbjct: 431 LRRVNAGNSSNDVVSERYATCDGRADVVAATNSSAATLD----REFDVLVLDEATQATCT 486
Query: 606 ESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQ-- 663
S IPL A N VL GD QLP ++ E+ G SLFE L + + +Q
Sbjct: 487 ASCIPLARA--NKVVLAGDHKQLPPFSATEDPPESAAGMSLFEHLYADGGVYEGVGVQLR 544
Query: 664 --YRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIY 721
YRMH I+ F N +FY + G +V S ++ L G + +GG E+ I
Sbjct: 545 TQYRMHRDIAWFSNRRFYDRALRQGRDVTSLE-DQPALVGYD---------VGGSEETID 594
Query: 722 HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFT 781
HS RN E V ++ +L + IGV++PYTAQV A+R K+ E G
Sbjct: 595 HSKRNDAEARLVAHVVDELRTE--AGLEASDIGVITPYTAQVDAVRTKLTTRLER--GRE 650
Query: 782 VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISK----PQRVNVALTRARHCLWILGSE 837
V V +ID FQG E+ I+IS VR N G +GF+ + P+R+NVA+TRA I+G
Sbjct: 651 VTVDTIDSFQGSEKVAIVISLVRSNADGEVGFLDRPLDGPRRLNVAMTRAERFCAIVGDW 710
Query: 838 RTL 840
TL
Sbjct: 711 YTL 713
>gi|300175280|emb|CBK20591.2| unnamed protein product [Blastocystis hominis]
Length = 861
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 140/252 (55%), Gaps = 12/252 (4%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
N +++DEA+Q E E+ IP+ + G + VL+GD+ QL +V S + AG+ SLFERL
Sbjct: 588 FNSVLVDEASQATECETLIPI-VHGAHRVVLVGDQKQLQPVVLSAVCKRAGYDVSLFERL 646
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFI 710
LL +QYRMHP++S+F N +FY ++ DG ++ K T+ F
Sbjct: 647 IDSGMEPQLLCVQYRMHPALSVFSNHKFYEGRLEDGIGEANRPLIKFCYPNTKVPLL-FW 705
Query: 711 NIIGGREDF--IYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
N + GRE S N+ E +AV+ I+++L + + K+ IGV++ YT Q V ++
Sbjct: 706 N-VKGRESIGNTGSSFLNVQEATAVVNIVKELMQCGIKEKK---IGVITSYTGQKVLLKN 761
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
+ K V+ S++ FQG E D I++S VR N IGF+ P+R+NVALTRAR
Sbjct: 762 LLQQSRLGK----VECASVNTFQGREMDYIVLSCVRSNPMRIIGFLKDPKRLNVALTRAR 817
Query: 829 HCLWILGSERTL 840
+ I+G L
Sbjct: 818 FGMIIVGDTSVL 829
>gi|294936357|ref|XP_002781732.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239892654|gb|EER13527.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 503
Score = 141 bits (356), Expect = 3e-30, Method: Composition-based stats.
Identities = 95/269 (35%), Positives = 132/269 (49%), Gaps = 24/269 (8%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE Q E S +PL G VL+GD QLPA V + G G SLFERL
Sbjct: 226 VIIDECTQATEPASLVPLA-RGAKRCVLLGDHKQLPATVHCNTAKSGGLGISLFERLAMS 284
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF-------GT 706
HLL+IQ RMHPSI+ F N FY N+I K + ++ + G +
Sbjct: 285 GTPVHLLDIQRRMHPSIAEFSNHHFYDNRI------KHEVSDRPLIPGLRWPNPQIRVAL 338
Query: 707 YSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---- 762
+I G E + S N E +L LY A IG+V PY AQ
Sbjct: 339 VDTSQLIAG-ESKVGTSLMNREEARL---LLDALYDAVANGTPPGQIGLVVPYNAQKSHV 394
Query: 763 VVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNV 822
+ A+++ F E + V++ ++DGFQG E+++I S VR N G +GFI+ P+R+NV
Sbjct: 395 IAALKEDTRFSPEQRAA--VQINTVDGFQGHEKELIFFSAVRSNVSGQVGFIADPRRMNV 452
Query: 823 ALTRARHCLWILGSERTLISSESIWGALV 851
LTRAR L + T+ +S W + V
Sbjct: 453 MLTRARRGLVVFCDVNTMTASGGHWRSWV 481
>gi|213408485|ref|XP_002175013.1| ATP-dependent helicase NAM7 [Schizosaccharomyces japonicus yFS275]
gi|212003060|gb|EEB08720.1| ATP-dependent helicase NAM7 [Schizosaccharomyces japonicus yFS275]
Length = 926
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/277 (35%), Positives = 146/277 (52%), Gaps = 27/277 (9%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E E IPL VL+GD QL +V +K + +AG +SLFERL L
Sbjct: 560 VLIDEATQASEPECMIPLTHV-YKQVVLVGDHQQLGPVVMNKKAAQAGLSQSLFERLIIL 618
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYL----TGTEFGTYSF 709
+S L +QYRMHP +S FP+ FY + +G V + +YL E +
Sbjct: 619 GNSPIRLTVQYRMHPCLSEFPSNMFYEGTLQNG--VTTAERLARYLDFPWPQPEEPLMFY 676
Query: 710 INIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
N G+E+ S N E S KI+ + +KA V +Q IG+++PY Q I
Sbjct: 677 ANF--GQEEISASGTSYLNRTEASTCEKIVTQFFKAGVTPEQ---IGIITPYDGQRSYI- 730
Query: 768 KKIGFEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRV 820
+Y +G V+V S+D FQG E+D II+S VR + IGF+S+P+R+
Sbjct: 731 ----VQYMQNNGALKKDLYKAVEVASVDAFQGREKDFIILSCVRSSEHQGIGFLSEPRRL 786
Query: 821 NVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
NVALTRAR+ + +LG+ + L + ++W + + R
Sbjct: 787 NVALTRARYGVIVLGNPKVL-AKHALWYHFIVHCRER 822
Score = 46.6 bits (109), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 15/96 (15%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK----CRTLAC 312
LN SQV A+ + L + + LI GPPGTGKT T + ++ L L C
Sbjct: 395 LNSSQVNAVRSVLTQ-------PLSLIQGPPGTGKTVTSASIVYHLATQTKGNGSAVLVC 447
Query: 313 TPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
P+NVA+ +LA ++ L++V+ + K ++P+
Sbjct: 448 APSNVAVDQLAEKIHQTGLRVVRVTAKSREDIDSPV 483
>gi|68070943|ref|XP_677385.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56497484|emb|CAH99909.1| hypothetical protein PB000602.03.0 [Plasmodium berghei]
Length = 426
Score = 141 bits (355), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 140/266 (52%), Gaps = 17/266 (6%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
N +++DEA Q E E +PL + G VL+GD CQL ++ K + +G G+SLFERL
Sbjct: 23 FNQVLVDEATQSTEPECLVPL-VTGAKQIVLVGDHCQLGPIIVCKKAASSGLGKSLFERL 81
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFI 710
L + L +QYRMHP +S FP+ FY + +G +K + Y + F
Sbjct: 82 MMLGITPFRLEVQYRMHPCLSEFPSYVFYDGCLQNGITLKEREYPLKNFPWPNSKYPMFF 141
Query: 711 NIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS-IGVVSPYTAQVVAI--- 766
G E+ + A + ++ L +A + S K + IGV++PY Q I
Sbjct: 142 YNSNGLEEMSASGTSYLNRNEA--QNMEILVRALLNSGLKATQIGVITPYEGQRAYITSL 199
Query: 767 -RKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALT 825
+K I +++ ++V S+D FQG E+D I++S VR N IGF++ P+R+NVALT
Sbjct: 200 FQKNISYQH----CLDIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALT 255
Query: 826 RARHCLWILGSERTL-----ISSESI 846
RA++ L I G+ + L IS E I
Sbjct: 256 RAKYGLIICGNAKVLSRHHFISKEKI 281
>gi|427788499|gb|JAA59701.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 1125
Score = 141 bits (355), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 143/277 (51%), Gaps = 17/277 (6%)
Query: 579 SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISD 638
+ +K HS+ +IDE+ Q E E +P+ L G +L+GD CQL +V K +
Sbjct: 607 ARFKFHSI--------LIDESMQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAA 657
Query: 639 EAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
AG +SLFERL L L +QYRMHP ++ FP+ FY + +G +
Sbjct: 658 RAGLSQSLFERLVVLGIRPLRLEVQYRMHPQLAQFPSNFFYEGSLQNGVFADERRMRGLD 717
Query: 699 LTGTEFGTYSFINIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
+ G+E+ N E + V KI + ++ V +Q +GV+
Sbjct: 718 FPWPQPERPMLFYACQGQEEMAGSGTSYLNRTEAALVEKICTRFLRSGVKPQQ---VGVI 774
Query: 757 SPYTAQVVAIRKKIGFE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFI 814
+PY Q + + + F+ +K ++V S+D FQG E+D+I++S VR N IGF+
Sbjct: 775 TPYEGQRAYLVQHMQFQGALHSKLYQEIEVASVDAFQGREKDLIVMSCVRSNEHQGIGFL 834
Query: 815 SKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
+ P+R+NVALTRAR+ L I+G+ + L S + +W L+
Sbjct: 835 NDPRRLNVALTRARYGLIIVGNPKVL-SKQPLWNHLL 870
Score = 48.1 bits (113), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC-RTLACTPT 315
LN SQV A+ L+R + LI GPPGTGKT T + ++ L + L C P+
Sbjct: 452 LNRSQVYAVKHALQRP-------LSLIQGPPGTGKTVTSATVVYHLAKQSTGPVLVCAPS 504
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N+A+ +L +V L++V+ K N+P+
Sbjct: 505 NIAVDQLTEKVHQTGLRVVRLCAKSREALNSPV 537
>gi|241598902|ref|XP_002404932.1| nonsense-mediated mRNA decay protein, putative [Ixodes scapularis]
gi|215502402|gb|EEC11896.1| nonsense-mediated mRNA decay protein, putative [Ixodes scapularis]
Length = 1122
Score = 141 bits (355), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 144/277 (51%), Gaps = 17/277 (6%)
Query: 579 SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISD 638
+ +K HS+ +IDE+ Q E E +P+ L G +L+GD CQL +V K +
Sbjct: 608 ARFKFHSI--------LIDESMQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAA 658
Query: 639 EAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
AG +SLFERL L L +QYRMHP +S FP+ FY + +G + +
Sbjct: 659 RAGLSQSLFERLVVLGIRPLRLEVQYRMHPQLSKFPSNFFYEGSLQNGVFADERRMKGVD 718
Query: 699 LTGTEFGTYSFINIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
+ G+E+ S N E + V KI + ++ V +Q IG++
Sbjct: 719 FPWPQPDKPMLFYACQGQEEMAGSGTSYLNRTEAALVEKIATRFLRSAVKPQQ---IGII 775
Query: 757 SPYTAQVVAIRKKIGFE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFI 814
+PY Q + + + F+ K ++V S+D FQG E+D+I++S VR N IGF+
Sbjct: 776 TPYEGQRAYLVQHMQFQGALHAKLYQEIEVASVDAFQGREKDLIVMSCVRSNEHQGIGFL 835
Query: 815 SKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
+ P+R+NVALTRAR+ + I+G+ + L S + +W L+
Sbjct: 836 NDPRRLNVALTRARYGIIIVGNPKVL-SKQPLWNHLL 871
Score = 45.4 bits (106), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ V + Q + F LN SQV A+ L+R + LI GPPGTGKT T
Sbjct: 429 EVEDVVMRCQLPKHFSAPNLPELNRSQVYAVKHALQRP-------LSLIQGPPGTGKTVT 481
Query: 295 VSMLLLTLLR-IKCRTLACTPTNVAITELASRV 326
++ L++ L C P+N+A+ +L ++
Sbjct: 482 SGTIVYHLVKQSNGPVLVCAPSNIAVDQLTEKI 514
>gi|358341434|dbj|GAA49117.1| regulator of nonsense transcripts 1 [Clonorchis sinensis]
Length = 1183
Score = 141 bits (355), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 138/262 (52%), Gaps = 10/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL + G VL+GD CQL ++ K + AG +SLFER L
Sbjct: 471 VLIDESTQATEPECLIPL-MVGCRQVVLVGDHCQLGPVITCKKAANAGLTQSLFERFVLL 529
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + + F
Sbjct: 530 GIRPMRLQVQYRMHPALSAFPSNVFYEGSLQNGVTAEDRCKQIDF-PWPNPDRPMFFYCT 588
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ + N E + V KI+ K+ K V +IGV++PY Q + +
Sbjct: 589 SGQEEISGNGVSYLNRTEAATVEKIVTKMLKIGV---HPNTIGVITPYEGQRAYLAHYLH 645
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+ +K +++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 646 YSGSLNSKLYQEIEIASVDAFQGREKDYIILSCVRANENQGIGFLNDPRRLNVALTRARY 705
Query: 830 CLWILGSERTLISSESIWGALV 851
L ++G+ + L + +W L+
Sbjct: 706 GLIVVGNPKALC-KQPLWNQLL 726
Score = 43.1 bits (100), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 12/80 (15%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACTPT 315
LN SQV A+ L+R + LI GPPGTGKT T + ++ L +I + + L P+
Sbjct: 309 LNHSQVFAVKTVLQRP-------LSLIQGPPGTGKTVTSASIVYHLNKIHQKKVLVVAPS 361
Query: 316 NVAITELASRV----LKLVK 331
N A+ +L ++ LK+V+
Sbjct: 362 NTAVDQLCEKISRTGLKVVR 381
>gi|296423838|ref|XP_002841459.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637699|emb|CAZ85650.1| unnamed protein product [Tuber melanosporum]
Length = 1105
Score = 141 bits (355), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/279 (36%), Positives = 145/279 (51%), Gaps = 25/279 (8%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + AG +SLFERL L
Sbjct: 599 VLIDESTQAAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAARAGLHQSLFERLVIL 657
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGT-YSFINI 712
+ LN+QYRMHP +S FP+ FY + +G + + T F +
Sbjct: 658 GCAPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTTQERLRRNVDFPWPVADTPMMFWSN 717
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VV---- 764
+G E S N E SA KI+ + +KA V Q IG+++PY Q +V
Sbjct: 718 LGNEEISASGTSYLNRTEASACEKIITRFFKAGVLPSQ---IGIITPYEGQRSYIVSSMQ 774
Query: 765 ---AIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVN 821
A+RK++ E E V S+D FQG E+D I++S VR N IGF++ P+R+N
Sbjct: 775 TNGALRKELYKEIE--------VASVDAFQGREKDYIVLSCVRSNDHQGIGFLNDPRRLN 826
Query: 822 VALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
VALTRA+ + ILG+ + L S +W L+ K + C
Sbjct: 827 VALTRAKFGVVILGNPKVL-SKHPLWHYLLLHYKDKNCL 864
Score = 48.5 bits (114), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC-RTLACTPT 315
LN SQV A+ + L + + LI GPPGTGKT T + ++ L + + L C P+
Sbjct: 437 LNVSQVHAVKSVLSKP-------LSLIQGPPGTGKTVTSATIVYHLAKTNVGQVLVCAPS 489
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
NVA+ +L ++ LK+V+ + K ++P+
Sbjct: 490 NVAVDQLTEKIHRTGLKVVRLTAKSREDVDSPV 522
>gi|195043318|ref|XP_001991595.1| GH11976 [Drosophila grimshawi]
gi|193901353|gb|EDW00220.1| GH11976 [Drosophila grimshawi]
Length = 1276
Score = 141 bits (355), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 146/271 (53%), Gaps = 10/271 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 640 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 698
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + + + + + F +
Sbjct: 699 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDF-PWPQPDRPMFFLVT 757
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E + V KI + KA + +Q IG+++PY Q + + +
Sbjct: 758 QGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQ---IGIITPYEGQRAYLVQYMQ 814
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ ++ +++ S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA++
Sbjct: 815 YQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKY 874
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCF 860
+ I+G+ + L S + +W L+ K R+
Sbjct: 875 GIIIVGNPKVL-SKQQLWNHLLNFYKDRKVL 904
Score = 49.3 bits (116), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRT-LACTPT 315
LN SQV A+ L+R + LI GPPGTGKT T + ++ L++ T L C P+
Sbjct: 478 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQHGGTVLVCAPS 530
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ K ++P+
Sbjct: 531 NTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPV 563
>gi|449434252|ref|XP_004134910.1| PREDICTED: probable helicase MAGATAMA 3-like [Cucumis sativus]
Length = 841
Score = 140 bits (354), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 147/283 (51%), Gaps = 15/283 (5%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
+ ++IDEAAQ E + +PL G L+GD QLPA V S + + G+ +SLF+R
Sbjct: 489 FDVVIIDEAAQAVELATLVPLA-NGCKQVFLVGDPEQLPATVISTTAKKFGYDKSLFKRF 547
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFI 710
+ + +L IQYRMHP I FP+ +FY + D +VK ++ + + +G + F
Sbjct: 548 QTAGYPVTMLKIQYRMHPEIRSFPSREFYAESLEDAQDVKLRTT-RAWHAYRCYGPFCFF 606
Query: 711 NIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
++ G+E S NI E V+ + KL ++ K + ++SPY+ QV +++
Sbjct: 607 DLHEGKESQPPGSGSWVNIDEADFVLHLYHKLVISYPELKSNSQVAIISPYSQQVKLLQE 666
Query: 769 KIG--FEYENKDGF-TVKVKSIDG-------FQGGEEDIIIISTVRCNTGGSIGFISKPQ 818
K F + D +K+ ++ QG E+DI I S VR + SIGF+S +
Sbjct: 667 KFVDLFGMDPSDPLRMLKLGILEMNALCLILLQGREKDIAIFSCVRASENRSIGFLSDCR 726
Query: 819 RVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFF 861
R+NV +TRAR + ++GS TL E W LV A+ R C F
Sbjct: 727 RMNVGITRARASILVVGSASTLKRDEH-WNNLVESAQKRDCLF 768
>gi|302829609|ref|XP_002946371.1| hypothetical protein VOLCADRAFT_86581 [Volvox carteri f.
nagariensis]
gi|300268117|gb|EFJ52298.1| hypothetical protein VOLCADRAFT_86581 [Volvox carteri f.
nagariensis]
Length = 1135
Score = 140 bits (354), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 155/309 (50%), Gaps = 51/309 (16%)
Query: 594 LVIDEAAQLKESESTIPLQLAG--INHA-------------------------VLIGDEC 626
++IDE+ Q E E IP+ L + HA +L+GD C
Sbjct: 683 VLIDESTQAAEPECLIPMVLGAKQLPHAAQWVFLLLASPHVHRWRTSMLTAKVILVGDHC 742
Query: 627 QLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG 686
QL ++ K + EAG +SLFERL L L +QYRMHP +S FP+ FY + +G
Sbjct: 743 QLGPVIMCKKAAEAGLCQSLFERLRLLGVKPIRLQVQYRMHPCLSEFPSNTFYEGTLQNG 802
Query: 687 ANVKSKSYEKQYLTGTEFGTYS------FINIIGGRE-DFIYHSCRNIVEVSAVIKILQK 739
+ + L G +F ++ F +G E S N E +AV K++ +
Sbjct: 803 TGMGERR-----LVGVDFPWHNPDKPMMFWVQLGAEEISASGTSYLNRTEAAAVEKVVTR 857
Query: 740 LYKAWVGSKQKVSIGVVSPYTAQ---VVAIRKKIGFEYEN--KDGFTVKVKSIDGFQGGE 794
+ + Q IGV++PY Q VV++ + G ++ K+ ++V S+D FQG E
Sbjct: 858 FLQNGMSPSQ---IGVITPYEGQRAHVVSVMVRNGAVRQDLYKE---IEVSSVDAFQGRE 911
Query: 795 EDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDA 854
+DII++S VR N SIGF+S P+R+NVALTRAR+ L +LG+ R L S + +W +L+
Sbjct: 912 KDIIVLSCVRSNEHSSIGFLSDPRRLNVALTRARYGLVVLGNPRVL-SRQPLWNSLLQYF 970
Query: 855 KARQCFFNA 863
K C
Sbjct: 971 KESGCLVEG 979
>gi|357492379|ref|XP_003616478.1| Lupus brain antigen [Medicago truncatula]
gi|355517813|gb|AES99436.1| Lupus brain antigen [Medicago truncatula]
Length = 1276
Score = 140 bits (354), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 85/114 (74%), Gaps = 5/114 (4%)
Query: 770 IGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+G +Y+ + F VKVK+IDGFQGGE+DIII STVR + S+ QR NVALTRARH
Sbjct: 2 LGQKYDKHEDFNVKVKTIDGFQGGEQDIIIFSTVRTDCSTSLD-----QRTNVALTRARH 56
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEI 883
CLWILG+ERTL+S +++W ALV DAK RQCFFNADE+ +L K + KEL ++
Sbjct: 57 CLWILGNERTLVSQDNVWKALVLDAKKRQCFFNADEDEDLVKGIWDAKKELDQL 110
Score = 139 bits (350), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 167/343 (48%), Gaps = 37/343 (10%)
Query: 1281 MISLRQTEVCRSILEEIVSGYVTSKSKLSYGQIGRIAVMILGSGKLHNGLYRKVVERCVK 1340
M L+ + + RSI EI+ + S ++ VMILG+ + + + +V+ R
Sbjct: 876 MNQLKSSRIYRSIRGEILCLWKLLDSHFRLNS-SKVVVMILGTANVKDDPFVQVMTRFED 934
Query: 1341 DSPWQAFLKCLSQKMESEYLQHPSESNNERELYVIQKLHGALLDTYGANWRKEYDYMSPA 1400
+ + F+ L L H E E++ KL+ AL T+ N KE DY+SP+
Sbjct: 935 NKHGKDFIDSLRLYSAHGILPHK---KTEFEMHPTCKLYKALCYTWSVNRIKEVDYISPS 991
Query: 1401 YFLYLLERLLILISCFQG-YIFTTKSSFVDWRIYQEPHTNPTASFVTDVWQSFGDVLDSI 1459
F+YL E+LL+L SC +G I+ TKSSF +W I Q + + SF DV D +
Sbjct: 992 CFMYLFEQLLLLTSCSRGRLIYATKSSFTEWLICQNKFSLASLSFAP---VDTRDVHDFV 1048
Query: 1460 FFIVQHFLYNEKEMIEWISKSHKNVNNYHSLVVLRLVVIICLLHLNFG--KFGSSLRDLL 1517
++ F+ ++ ++ WI KS+ +V+NY + LR VV +CLLHL+ G K+ LR LL
Sbjct: 1049 ENFLRKFVNDQNDIKTWIKKSNLDVDNYFPSLFLRSVVSMCLLHLSTGSRKYLELLRCLL 1108
Query: 1518 GRKYVSRLLPLEFCDALRKIENHNCLNVHEISQAFKKIGNPLVIASLGKNCSQFLCPDAI 1577
Y++ +PLEFC+ L+K H L L + S+ +C DA+
Sbjct: 1109 KNSYMTTQMPLEFCNVLQKGNKHMGL--------------------LQNSSSKIMCSDAV 1148
Query: 1578 FVNMKVMKSTDEIFGILYPKM-------EACQVQVGTSKDVPS 1613
FV++ K + + +L+P + + SK+ PS
Sbjct: 1149 FVDLATCKKRELVLEMLFPSIVDSVGGETTAEASESKSKEFPS 1191
Score = 92.8 bits (229), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 65/106 (61%)
Query: 962 NFREASKLVLNFVFSNSLWSPGSRGWPLKQFTQKEELLQKAKSLAKNDSNQFYEFVCAEA 1021
NF E +L+ +V + SLWS GS+ WP KQFT+KE+LL +A + AK S+ FYE E
Sbjct: 803 NFMEVYELMFFYVLAKSLWSGGSKAWPFKQFTEKEDLLGRALTFAKVVSSSFYELASTEV 862
Query: 1022 NILSNDHSNLVMMNQQFIDSKRHQNIRGEILSSRMILDFHLHSNAS 1067
LSN H N+ + Q S+ +++IRGEIL +LD H N+S
Sbjct: 863 ERLSNKHDNIFEIMNQLKSSRIYRSIRGEILCLWKLLDSHFRLNSS 908
>gi|332023768|gb|EGI63992.1| Putative helicase senataxin [Acromyrmex echinatior]
Length = 1939
Score = 140 bits (354), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 161/314 (51%), Gaps = 38/314 (12%)
Query: 563 EDFCFKRASLFFSTASSSY-----KLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGIN 617
ED + A++ T SS Y L + ++ ++DEA Q E+E+ IPL L G+
Sbjct: 1564 EDIVLQGANIIACTLSSCYTNQMESLFGGHKERISVCIVDEATQSCEAETLIPLML-GVT 1622
Query: 618 HAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL-----NHSKHLLNIQYRMHPSISL 672
VL+GD QLPA + S+ + + G +S+F R+ ++ N+ +L++QYRM +IS
Sbjct: 1623 TLVLVGDPNQLPATILSQRAKKLGLDQSVFSRIQNVFASQSNNPIIMLDMQYRMEYAISY 1682
Query: 673 FPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFI--YHSCRNIVEV 730
+PN FY G +K+ + Y F Y ++ +F Y N E
Sbjct: 1683 WPNRYFY------GGKLKNAT---DYRMKFPFHAYRVLD-----HNFTQNYDKFSNTTEA 1728
Query: 731 SAVIKILQKLYK--AWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEY-----ENKDGFTVK 783
V I+ + K W + +++GV++PY Q + KI + + K + +
Sbjct: 1729 EFVANIIYTMLKCAKWESTSTTITLGVLTPYNNQRTLVLNKINEKISSVPDDTKKKISFE 1788
Query: 784 VKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISS 843
V ++DGFQG E D+II+S VR IGF+S QR+ VALTRA+H L + G+ RT +
Sbjct: 1789 VNTVDGFQGQERDVIIMSCVR---SSGIGFLSDKQRLCVALTRAKHSLILCGNFRTFM-K 1844
Query: 844 ESIWGALVCDAKAR 857
+ +W AL+ DA+ R
Sbjct: 1845 DKMWKALLTDARNR 1858
Score = 45.4 bits (106), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKC------RTLACTPTNVAITELASRVLKL 329
I GPPGTGK+K + L+ +L C R L C P+N AI E+ R+L +
Sbjct: 1393 FIQGPPGTGKSKVIVNLVAQILYGACQDKKSLRILICAPSNAAIDEIVIRLLHI 1446
>gi|294675290|ref|YP_003575906.1| helicase [Prevotella ruminicola 23]
gi|294473767|gb|ADE83156.1| putative helicase [Prevotella ruminicola 23]
Length = 539
Score = 140 bits (354), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 180/355 (50%), Gaps = 21/355 (5%)
Query: 498 DNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTT 557
D ++S E+ F D + WA + ++ +++R + + ++ L T
Sbjct: 178 DKMLSFTYERRFEAHPDYEMLWALRKAIREVRANRKRGD-----QKFHQKVERLKERATE 232
Query: 558 SKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGIN 617
+L +++ F A + T S ++ + L IDEAAQ E+ IP++ ++
Sbjct: 233 LELRIKNDLFSEARVIACTLVGSAN-KVLDGQKFGTLFIDEAAQALEAACWIPMR--RVS 289
Query: 618 HAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSK--HLLNIQYRMHPSISLFPN 675
+L GD CQLP V+ + +AG G++L ER+ N + LL +QYRM+ I F +
Sbjct: 290 RVILAGDHCQLPPTVKCYEALKAGLGKTLMERIVE-NKPEVVTLLKMQYRMNEEIMRFSS 348
Query: 676 LQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFI----NIIGGREDFIYHSCRNIVEVS 731
FY NQ+ +VK +S + T T F + I +E+F+ S I +
Sbjct: 349 DWFYNNQVESAPDVKYRSILDLDVPMTWIDTSQFDFPEESGITFKEEFVGESFGRINKAE 408
Query: 732 AVIKILQ-KLYKAWVGS----KQKVSIGVVSPYTAQVVAIRKKIG-FEYENKDGFTVKVK 785
A + +L + Y +G K+++ +GV+SPY AQV +R+++ E+ + +
Sbjct: 409 AELTMLALQQYFEKIGKERIIKERIDVGVISPYRAQVQYLRQQLKKREFFKPFKSLISIN 468
Query: 786 SIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTL 840
++DGFQG E DII+IS VR N G IGF+ +R+NVA+TRAR L ILG TL
Sbjct: 469 TVDGFQGQERDIIMISLVRANDEGQIGFLRDLRRMNVAITRARMKLIILGDASTL 523
Score = 43.9 bits (102), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 75/172 (43%), Gaps = 36/172 (20%)
Query: 249 FGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT-VSMLLLTLLRIKC 307
F P + LN +Q A+ LR D V ++ GPPGTGKT T V + TL+R +
Sbjct: 89 FSPLHFTYLNATQEDAVNKVLRAKD------VAIVHGPPGTGKTTTLVEAIYETLMR-ES 141
Query: 308 RTLACTPTNVA---ITE-LASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNP 363
+ L C +N+A I+E L R + ++ R P +L F + R + +P
Sbjct: 142 QVLVCAQSNMAVDWISEILVDRGVNVL--------RIGNPTRVNDKMLSFTYERRFEAHP 193
Query: 364 GFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKER 415
+E ++ LR+ + R ++H VE+LKER
Sbjct: 194 DYEMLW------ALRKAIREVRANRKRGD----------QKFHQKVERLKER 229
>gi|311746247|ref|ZP_07720032.1| DNA-binding protein SMUBP-2 [Algoriphagus sp. PR1]
gi|126576477|gb|EAZ80755.1| DNA-binding protein SMUBP-2 [Algoriphagus sp. PR1]
Length = 642
Score = 140 bits (354), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 151/290 (52%), Gaps = 27/290 (9%)
Query: 566 CFKRASLFFST--ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIG 623
F++ +F ST +SSY L +E + + IDEAAQ E+ + IP+ A V G
Sbjct: 338 IFQKTKVFASTLVGASSYSLKGME---FDVVFIDEAAQGLEAATWIPILKA--KKVVFAG 392
Query: 624 DECQLPAMVESKISDEAGFGRSLFERLTSL-NHSKHLLNIQYRMHPSISLFPNLQFYRNQ 682
D CQLP ++S + + G +LFE++ + + + +L +QYRM I F N QFY+ +
Sbjct: 393 DHCQLPPTIKSYQAAQEGLAETLFEKVIARKSQASQMLQVQYRMPEVIMGFSNEQFYKGE 452
Query: 683 ILDGANVKSKSY--EKQYLTGTEFGTYSFIN------IIGGREDFIYHSCRNIVEVSAVI 734
+ N K ++ E Q L + + + + + +CR + E+ I
Sbjct: 453 LQAAENTKLHTFPGEDQQLEWIDTAGAGYNDQKEAESLSTCNPEEAAFACRYLNEMIVRI 512
Query: 735 KILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI--GFEYENKDGFT--VKVKSIDGF 790
I + W +IG+++PY AQV +R I GFEY N F+ + + ++DGF
Sbjct: 513 GIGNFKQEGW-------TIGLIAPYGAQVRLLRSLIFEGFEYPNLKAFSDLITIDTVDGF 565
Query: 791 QGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTL 840
QG E D+++IS R N G IGF++ +R+NVALTRA+ L ++G TL
Sbjct: 566 QGQERDLMLISLTRSNEKGEIGFLADERRMNVALTRAKRKLVLVGDSSTL 615
>gi|449269034|gb|EMC79843.1| putative helicase senataxin, partial [Columba livia]
Length = 2491
Score = 140 bits (354), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 157/299 (52%), Gaps = 39/299 (13%)
Query: 588 IKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLF 647
+ P + +++DEA Q E E+ IPL + N VL+GD QLP V+S + + G+ SL
Sbjct: 2191 LDPFSCVIVDEAGQSCEVETLIPL-IHRCNKLVLVGDPRQLPPTVKSVKAQDYGYDHSLM 2249
Query: 648 ERLTSLNHSKHL----------------LNIQYRMHPSISLFPNLQFYRNQILDGANVKS 691
RL +HL L +QYRMHP I LFP+ Y G +++
Sbjct: 2250 ARL-----HQHLEQQVQNNVLRSLPVVQLTVQYRMHPDICLFPSNYVY------GRTLRT 2298
Query: 692 KSYEKQYLTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQ--KLYKAWVGS 747
++ +E F Y ++ RE+ S N EV V+++++ K + +G
Sbjct: 2299 DKATEENRCSSEWPFQPYLIFDVGDSREERDNDSFSNPQEVKLVMELIRTIKEKRKDLGL 2358
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCN- 806
++ IG+++PY+AQ I++++ Y N +V ++D FQG E+D II++ VR N
Sbjct: 2359 RR---IGIITPYSAQKKKIQEQLDRVYRNNS--PGEVDTVDAFQGREKDCIIVTCVRANS 2413
Query: 807 TGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADE 865
T GSIGF++ QR+NV +TRAR L+ILG +TL+ ++ W L+ DA+ R E
Sbjct: 2414 TRGSIGFLASLQRLNVTITRARFSLFILGRLKTLMENKD-WNELIQDAQRRGAIIKTTE 2471
Score = 47.0 bits (110), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 20/87 (22%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKCRT----------------LACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL +L+ R L C P+N A+ EL +
Sbjct: 1977 LIHGPPGTGKSKTIVGLLSRVLKENTRNEKATQKTNSKMKPNRFLVCAPSNAAVDELMKK 2036
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ ++K ++ P+ GDI L
Sbjct: 2037 IIT----AFKGKCQNKQPLGNCGDITL 2059
>gi|195396575|ref|XP_002056906.1| GJ16782 [Drosophila virilis]
gi|194146673|gb|EDW62392.1| GJ16782 [Drosophila virilis]
Length = 1219
Score = 140 bits (353), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 147/271 (54%), Gaps = 10/271 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 624 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 682
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + + + + F+ +
Sbjct: 683 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFL-VT 741
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI + KA + +Q IG+++PY Q + + +
Sbjct: 742 QGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQ---IGIITPYEGQRAYLVQYMQ 798
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ ++ +++ S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA++
Sbjct: 799 YQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKY 858
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCF 860
+ I+G+ + L + + +W L+ K R+
Sbjct: 859 GIIIVGNPKVL-AKQQLWNHLLNFYKDRKVL 888
Score = 50.4 bits (119), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRT-LACTPT 315
LN SQV A+ L+R + LI GPPGTGKT T + ++ L++ T L C P+
Sbjct: 462 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQHAGTVLVCAPS 514
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ K ++P+
Sbjct: 515 NTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPV 547
>gi|339252438|ref|XP_003371442.1| hypothetical protein Tsp_11650 [Trichinella spiralis]
gi|316968330|gb|EFV52623.1| hypothetical protein Tsp_11650 [Trichinella spiralis]
Length = 650
Score = 140 bits (353), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 112/343 (32%), Positives = 172/343 (50%), Gaps = 24/343 (6%)
Query: 527 LLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFST--ASSSYKLH 584
LLQ+ + E V N ++SL KL E K+A + T A+ +L
Sbjct: 280 LLQVKEETGELSPVEENRFSSL----------KLKYERELLKKADVICCTCVAAGDSRLA 329
Query: 585 SVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGR 644
+++ + + +IDE+ Q KE E IP+ + G VL+GD CQL +V + + AG R
Sbjct: 330 AIKFRAV---LIDESTQAKEPECLIPI-VTGARQVVLVGDHCQLGPVVICEEAARAGLNR 385
Query: 645 SLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF 704
SLFERL L + L +QYRMHP +SL P+ FY + +G + + E
Sbjct: 386 SLFERLVILGNQPIRLQVQYRMHPLLSLLPSNLFYEGTLQNGVTEQERILEAGDFRWPNP 445
Query: 705 GTYSFINIIGGREDFIY--HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ 762
F +E+ S N E + + KI K ++ V + Q IG+++PY AQ
Sbjct: 446 TVPMFFWCTLSQEEKPRSGKSFLNRAEAAHIEKIATKFLRSGVRADQ---IGIITPYEAQ 502
Query: 763 VVAIRKKI--GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRV 820
I K + NK ++V S+D FQG E+DII++S VR N IGF++ +R+
Sbjct: 503 RAHIVKHMLHSGPLNNKLYQEIEVASVDAFQGREKDIILLSCVRSNKDNKIGFLNDSRRL 562
Query: 821 NVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
NVALTRAR+ L I+G+ + L S + +W +L+ + C +
Sbjct: 563 NVALTRARYGLIIVGNPKVL-SHQPMWNSLLRFCRENHCLLHG 604
Score = 53.1 bits (126), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPT 315
LN SQV A+ L R + LI GPPGTGKT T + ++ L + + L C+P+
Sbjct: 174 LNHSQVMAVREVLTR-------SISLIQGPPGTGKTVTSASIVYHLAKARGTPILVCSPS 226
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
NVAI +LA ++ L++++ K + ++P+
Sbjct: 227 NVAIDQLAEKISRTGLRVIRTCAKSREKIDSPV 259
>gi|256082381|ref|XP_002577435.1| nonsense-mediated mRNA decay protein 1 (rent1) [Schistosoma
mansoni]
gi|238662753|emb|CAZ33673.1| nonsense-mediated mRNA decay protein 1 (rent1),putative
[Schistosoma mansoni]
Length = 1301
Score = 140 bits (353), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 137/262 (52%), Gaps = 10/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL + G VL+GD CQL ++ K + AG +SLFER L
Sbjct: 587 VLIDESTQATEPECLIPL-MVGCRQVVLVGDHCQLGPVITCKKAASAGLTQSLFERFVLL 645
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + +K F
Sbjct: 646 GIRPIRLQVQYRMHPALSAFPSNVFYEGSLQNGVTAEDRC-KKIDFPWPNPDRPMFFYCT 704
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ + N E + V KI+ K+ K V +IGV++PY Q + +
Sbjct: 705 SGQEEISGNGVSYLNRTEAATVEKIVTKMLKIGV---HPNTIGVITPYEGQRAYLAHYLH 761
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+ K +++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 762 YSGSLNAKLYQEIEIASVDAFQGREKDYIILSCVRANENQGIGFLNDPRRLNVALTRARY 821
Query: 830 CLWILGSERTLISSESIWGALV 851
L ++G+ + L + +W L+
Sbjct: 822 GLIVVGNPKALC-KQPLWNQLL 842
Score = 42.7 bits (99), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 12/80 (15%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACTPT 315
LN SQV A+ L+R + LI GPPGTGKT T + ++ L +I + + L P+
Sbjct: 425 LNHSQVFAVKTVLQR-------PLSLIQGPPGTGKTVTSASIVYHLNQIHQKKVLVVAPS 477
Query: 316 NVAITELASRV----LKLVK 331
N A+ +L ++ LK+V+
Sbjct: 478 NTAVDQLCEKIDRTGLKVVR 497
>gi|256082379|ref|XP_002577434.1| nonsense-mediated mRNA decay protein 1 (rent1) [Schistosoma
mansoni]
gi|238662752|emb|CAZ33672.1| nonsense-mediated mRNA decay protein 1 (rent1),putative
[Schistosoma mansoni]
Length = 1325
Score = 140 bits (353), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 137/262 (52%), Gaps = 10/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL + G VL+GD CQL ++ K + AG +SLFER L
Sbjct: 611 VLIDESTQATEPECLIPL-MVGCRQVVLVGDHCQLGPVITCKKAASAGLTQSLFERFVLL 669
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + +K F
Sbjct: 670 GIRPIRLQVQYRMHPALSAFPSNVFYEGSLQNGVTAEDRC-KKIDFPWPNPDRPMFFYCT 728
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ + N E + V KI+ K+ K V +IGV++PY Q + +
Sbjct: 729 SGQEEISGNGVSYLNRTEAATVEKIVTKMLKIGV---HPNTIGVITPYEGQRAYLAHYLH 785
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+ K +++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 786 YSGSLNAKLYQEIEIASVDAFQGREKDYIILSCVRANENQGIGFLNDPRRLNVALTRARY 845
Query: 830 CLWILGSERTLISSESIWGALV 851
L ++G+ + L + +W L+
Sbjct: 846 GLIVVGNPKALC-KQPLWNQLL 866
Score = 43.1 bits (100), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 12/80 (15%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACTPT 315
LN SQV A+ L+R + LI GPPGTGKT T + ++ L +I + + L P+
Sbjct: 449 LNHSQVFAVKTVLQRP-------LSLIQGPPGTGKTVTSASIVYHLNQIHQKKVLVVAPS 501
Query: 316 NVAITELASRV----LKLVK 331
N A+ +L ++ LK+V+
Sbjct: 502 NTAVDQLCEKIDRTGLKVVR 521
>gi|195131883|ref|XP_002010374.1| GI14718 [Drosophila mojavensis]
gi|193908824|gb|EDW07691.1| GI14718 [Drosophila mojavensis]
Length = 1187
Score = 140 bits (353), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 146/271 (53%), Gaps = 10/271 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 621 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 679
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + + + + F+ +
Sbjct: 680 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFL-VT 738
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E + V KI + KA + +Q IG+++PY Q + + +
Sbjct: 739 QGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQ---IGIITPYEGQRAYLVQYMQ 795
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ ++ +++ S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA++
Sbjct: 796 YQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKY 855
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCF 860
+ I+G+ + L + + +W L+ K R+
Sbjct: 856 GIIIVGNPKVL-AKQQLWNHLLNFYKDRKVL 885
Score = 49.7 bits (117), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRT-LACTPT 315
LN SQV A+ L+R + LI GPPGTGKT T + ++ L++ T L C P+
Sbjct: 459 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQHGGTVLVCAPS 511
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ K ++P+
Sbjct: 512 NTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPV 544
>gi|17510163|ref|NP_490829.1| Protein SMG-2 [Caenorhabditis elegans]
gi|351051256|emb|CCD73461.1| Protein SMG-2 [Caenorhabditis elegans]
Length = 1069
Score = 140 bits (353), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 108/330 (32%), Positives = 164/330 (49%), Gaps = 34/330 (10%)
Query: 559 KLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINH 618
K V E A + T SS+ +I+ L IDE+ Q E E + + + G+
Sbjct: 573 KRVKEHELLAAADVICCTCSSAADARLSKIRTRTVL-IDESTQATEPEILVSI-MRGVRQ 630
Query: 619 AVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQF 678
VL+GD CQL +V K + AG +SLFERL L L +QYRMHP +S FP+ F
Sbjct: 631 LVLVGDHCQLGPVVICKKAAIAGLSQSLFERLVLLGIRPFRLQVQYRMHPVLSEFPSNVF 690
Query: 679 YRNQILDGANVKSKSYEKQYLTGTEF-----GTYSFINIIGGREDFIYHSCR--NIVEVS 731
Y + +G + ++TG ++ +F G E+ N E +
Sbjct: 691 YDGSLQNGVTENDR-----HMTGVDWHWPKPNKPAFFWHCSGSEELSASGTSFLNRTEAA 745
Query: 732 AVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFE-------YENKDGFTVKV 784
V K++ KL KA V Q IGV++PY Q I + + YEN V++
Sbjct: 746 NVEKLVSKLIKAGVQPHQ---IGVITPYEGQRSFIVNYMHTQGTLNSKLYEN-----VEI 797
Query: 785 KSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSE 844
S+D FQG E+D II++ VR N IGF+S P+R+NVA+TRA++ L ++G+ + L +
Sbjct: 798 ASVDAFQGREKDYIIVTCVRSNDILGIGFLSDPRRLNVAITRAKYGLVLVGNAKVL-ARH 856
Query: 845 SIWGALVCDAKARQCFF----NADEERNLA 870
+W L+ K+++ + NA + NLA
Sbjct: 857 DLWHELINHYKSKEMLYEGPINALKPLNLA 886
Score = 47.0 bits (110), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL-RIKCRTLACTPT 315
LN SQ+ A+ L R + LI GPPGTGKT + ++ L+ + + L C+P+
Sbjct: 446 LNSSQMQAVKQVLTR-------PLSLIQGPPGTGKTVVSATIVYHLVQKTEGNVLVCSPS 498
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N+A+ LA ++ LK+V+ + S T +
Sbjct: 499 NIAVDHLAEKIHKTGLKVVRLCARSREHSETTV 531
>gi|390344703|ref|XP_786803.3| PREDICTED: regulator of nonsense transcripts 1-like
[Strongylocentrotus purpuratus]
Length = 1386
Score = 140 bits (353), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 134/262 (51%), Gaps = 9/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IP L G VL+GD CQL +V K + AG +SLFERL L
Sbjct: 849 VLIDESTQSTEPECLIPAVL-GSRQLVLVGDHCQLGPVVMCKKAANAGLCQSLFERLVVL 907
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHPS+S FP+ FY + +G + + F
Sbjct: 908 GIRPIRLQVQYRMHPSLSAFPSNIFYEGSLQNGVTAAERINRAVDFPFPQPDKPMFFYAT 967
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E S V K+ + +A V +Q IG+++PY Q I + +
Sbjct: 968 TGQEEIASSGTSYLNRTEASNVEKLTTRFLRAGVKPEQ---IGIITPYEGQRAFIVQYMQ 1024
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+ K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTR R+
Sbjct: 1025 YSGPLNVKLYQEVEIASVDAFQGREKDYIILSCVRANDHQGIGFLNDPRRLNVALTRGRY 1084
Query: 830 CLWILGSERTLISSESIWGALV 851
+ I+G+ + L S +W L+
Sbjct: 1085 GVIIVGNPKVL-SRHPLWNHLL 1105
Score = 48.5 bits (114), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC-RTLACTPT 315
LN SQV A+ L R + LI GPPGTGKT T + ++ L + + L C P+
Sbjct: 687 LNHSQVSAVRTVLTR-------PLSLIQGPPGTGKTVTSASIVYHLAKQGTGQVLVCAPS 739
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N+A+ +L ++ LK+V+ K ++P+
Sbjct: 740 NIAVDQLTEKIHKTGLKVVRLCAKSREAIDSPV 772
>gi|194770581|ref|XP_001967370.1| GF21587 [Drosophila ananassae]
gi|190618050|gb|EDV33574.1| GF21587 [Drosophila ananassae]
Length = 1180
Score = 140 bits (353), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 146/271 (53%), Gaps = 10/271 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 614 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 672
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + + + + F+ +
Sbjct: 673 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFL-VT 731
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E + V KI + KA + +Q IG+++PY Q + + +
Sbjct: 732 QGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQ---IGIITPYEGQRAYLVQYMQ 788
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ ++ +++ S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA++
Sbjct: 789 YQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKY 848
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCF 860
+ I+G+ + L + + +W L+ K R+
Sbjct: 849 GIIIVGNPKVL-AKQQLWNHLLNFYKDRKVL 878
Score = 49.3 bits (116), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRT-LACTPT 315
LN SQV A+ L+R + LI GPPGTGKT T + ++ L++ T L C P+
Sbjct: 452 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVKQHGGTVLVCAPS 504
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ K ++P+
Sbjct: 505 NTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPV 537
>gi|70949042|ref|XP_743968.1| regulator of nonsense transcripts [Plasmodium chabaudi chabaudi]
gi|56523717|emb|CAH78222.1| regulator of nonsense transcripts, putative [Plasmodium chabaudi
chabaudi]
Length = 670
Score = 140 bits (352), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 135/255 (52%), Gaps = 13/255 (5%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
N +++DEA Q E E +PL A VL+GD CQL ++ K + AG G+SLFERL
Sbjct: 263 FNQVLVDEATQSTEPECLVPLVTA--KQIVLVGDHCQLGPIIVCKKAASAGLGKSLFERL 320
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFI 710
L + L +QYRMHP +S FP+ FY + +G +K + Y + F
Sbjct: 321 VMLGITPFRLEVQYRMHPCLSEFPSYVFYDGCLQNGITLKEREYPLKNFPWPNSKYPMFF 380
Query: 711 NIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS-IGVVSPYTAQVVAI--- 766
G E+ + A + ++ L +A + S K + IGV++PY Q I
Sbjct: 381 YNSNGLEEMSASGTSYLNRSEA--QNMEILVRALLNSGLKATQIGVITPYEGQRAYITSL 438
Query: 767 -RKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALT 825
+K I +++ ++V S+D FQG E+D I++S VR N IGF++ P+R+NVALT
Sbjct: 439 FQKNISYQH----CLDIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALT 494
Query: 826 RARHCLWILGSERTL 840
RA++ L I G+ + L
Sbjct: 495 RAKYGLIICGNAKVL 509
Score = 55.1 bits (131), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 32/178 (17%)
Query: 204 NKRIWNSLHMCGNWKVITQVLGTDSVVDERCE-------LCSVQRKGQWDEKFGPSFSST 256
N+ +NS + G+ + ++LG D ++DE L S +K +++K +FS++
Sbjct: 31 NEFAFNSFSLSGH--LYHKLLGHD-IIDEPINYNKKEFSLNSDSKKYGYNKKSNDNFSTS 87
Query: 257 -------------LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL 303
LN SQ+ A+ L S + LI GPPGTGKT T + L+ +
Sbjct: 88 YKIVNYSAPNLAPLNHSQIDAIQKSLN-------SPLSLIQGPPGTGKTLTCATLVYHMH 140
Query: 304 RIKC--RTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRL 359
+ K + L P+NVA+ +L+ R+ + + + +RS + + D L N+ +L
Sbjct: 141 KTKMGGKVLVTAPSNVAVDQLSVRIHRTGLKVVRLCARSRESVSSIADYLYLHNQVKL 198
>gi|345567573|gb|EGX50503.1| hypothetical protein AOL_s00075g232 [Arthrobotrys oligospora ATCC
24927]
Length = 1147
Score = 140 bits (352), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 135/251 (53%), Gaps = 8/251 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + AG +SLFERL L
Sbjct: 612 VLIDESTQSAEPECMIPLVL-GCKQLVLVGDHQQLGPVIMNKKAARAGLHQSLFERLVIL 670
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK-QYLTGTEFGTYSFINI 712
+ LN+QYRMHP +S FP+ FY + +G V+ + + F +
Sbjct: 671 GCAPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTVQERLRRNVDFPWPVVDSPMMFWSN 730
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
+G E S N E +A KI+ K +KA V Q IG+++PY Q I +
Sbjct: 731 LGNEEISASGTSYLNRTEAAACEKIISKFFKAGVSPSQ---IGIITPYEGQRSYIVSSMQ 787
Query: 772 FEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+K ++V S+D FQG E+D I++S VR N IGF++ P+R+NVALTRA++
Sbjct: 788 TNGSHKKELYKDIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLNDPRRLNVALTRAKY 847
Query: 830 CLWILGSERTL 840
+ ILG+ + L
Sbjct: 848 GVVILGNPKVL 858
Score = 47.8 bits (112), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 12/84 (14%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPT 315
LN SQV A+ + L++ + LI GPPGTGKT T + ++ L ++ + L C P+
Sbjct: 450 LNISQVCAVKSVLQKP-------LSLIQGPPGTGKTVTSATIVYHLAKLSGSQVLVCAPS 502
Query: 316 NVAITELASRV----LKLVKESYK 335
NVA+ +L ++ LK+V+ + K
Sbjct: 503 NVAVDQLTEKIHRTSLKVVRLTAK 526
>gi|452820756|gb|EME27794.1| endonuclease [Galdieria sulphuraria]
Length = 712
Score = 140 bits (352), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 94/267 (35%), Positives = 144/267 (53%), Gaps = 20/267 (7%)
Query: 588 IKPLNFLV--IDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRS 645
+K ++F V IDEA Q E IP+ + G +L GD QLP + + + E+G S
Sbjct: 430 LKNISFQVVAIDEATQSHEPGLLIPI-IKGCEQLILAGDHYQLPPTILNPEAAESGLSVS 488
Query: 646 LFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFG 705
LFERL +LL QYRMHPSI+ FP+ FY + +S S Y
Sbjct: 489 LFERLVRSGVEPYLLRTQYRMHPSIAAFPSQYFYHGLLHSAPCTQSIS---NYFPWPNPQ 545
Query: 706 T-YSFINIIGGREDFIYH---SCRNIVEVSAVIKILQKLYKAWVGSKQK--------VSI 753
T +FI ++G E+++ S N E VI+ + ++ + W+ ++ +I
Sbjct: 546 TPIAFIPVLG--EEWVTEQGTSYCNPQESQVVIETISQIVENWMTAQNSNHTLQQSFPTI 603
Query: 754 GVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGF 813
G+++PY Q+ I ++ E + V+VK++DGFQG E+DIIIISTVR N S+GF
Sbjct: 604 GIITPYAGQMRDIMDRMDRETSTEWLSYVEVKTVDGFQGREKDIIIISTVRSNPSQSLGF 663
Query: 814 ISKPQRVNVALTRARHCLWILGSERTL 840
+ +R+NVA+TR+R L ++G+ TL
Sbjct: 664 LQDWRRLNVAITRSRSGLIVIGNANTL 690
Score = 48.1 bits (113), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 16/176 (9%)
Query: 150 VGRTWTFVSVT-TVPDDEDENKKENRYKVKARNNMQVHDKTKKSFF--FIYLTNILPN-K 205
G+ WT ++ TV + +N E + +++ ++ KSF I NI K
Sbjct: 154 AGKDWTVYQISNTVAFERSKNAVEELITMAQQSDHEISQIIVKSFAKEIIEDGNIQKEPK 213
Query: 206 RIWNSLHMCGNWKV-ITQVLGTDSVVDERCE-LCSVQRKGQWDEKFGPSFSSTLNESQVG 263
WN H C ++ V + G +DE C Q +W + + NESQ
Sbjct: 214 GGWNDYHTCSSYLVQLVTSQGRQGTLDELCRSRIFPQSPSEWQKIR--QDENDWNESQQT 271
Query: 264 AMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACTPTNVA 318
A L R + LI GPPGTGKTKT++ +L +L+++ + LA T++A
Sbjct: 272 AWKNALERR-------LTLIQGPPGTGKTKTLAKILASLVQLGRTPILASAYTHIA 320
>gi|407838371|gb|EKG00049.1| regulator of nonsense transcripts 1, putative,nonsense mRNA
reducing factor 1, putative [Trypanosoma cruzi]
Length = 839
Score = 140 bits (352), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 141/268 (52%), Gaps = 17/268 (6%)
Query: 592 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT 651
+++IDEA Q E E+ +PL + G L+GD CQL +V S ++ AG RSLFERL
Sbjct: 547 QYVLIDEATQGTEPETLVPL-VRGAKQVFLVGDHCQLRPLVFSLPAERAGLRRSLFERLL 605
Query: 652 SLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
H L++QYRMHP++SLFP+ QFY + +G + + + + F N
Sbjct: 606 MTGHRAVRLDVQYRMHPALSLFPSDQFYEGTLQNGLTEEQRDASRVFPWPDPTRPIFFYN 665
Query: 712 IIGGREDFIYHSCR-NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIR 767
G E S N E + +I+ KL + G + IGV++PY Q V+
Sbjct: 666 TTGSEELSANGSSYLNRAEAALTERIITKLIRD--GKVKPDDIGVITPYGGQCRYVMNYL 723
Query: 768 KKIG----FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
+ G YE V+V S+D FQG E++ II+S VR N IGF+ +R+NV+
Sbjct: 724 VRCGPLPRTAYER-----VEVSSVDAFQGREKEFIILSCVRSNHRQGIGFVVDWRRLNVS 778
Query: 824 LTRARHCLWILGSERTLISSESIWGALV 851
+TRA+ L I+G+ + L+S W AL+
Sbjct: 779 ITRAKRGLIIMGNVQ-LLSRYPAWHALL 805
Score = 54.7 bits (130), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 8/73 (10%)
Query: 255 STLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT-VSMLLLTLLRIKCRTLACT 313
S LN SQ A+ LR + + LI GPPGTGKT T V+++L RI+ + L C
Sbjct: 381 SNLNSSQDTAVRTALR-------NPLTLIQGPPGTGKTSTSVAIVLEVNRRIRSQILVCA 433
Query: 314 PTNVAITELASRV 326
P+NVA+ +LA R+
Sbjct: 434 PSNVAVDQLAERI 446
>gi|294893946|ref|XP_002774696.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239880149|gb|EER06512.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 375
Score = 140 bits (352), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 139/281 (49%), Gaps = 19/281 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDE Q E + +PL G VL+GD QL A + S + + G G+SLFER+
Sbjct: 89 VVIDECTQATEPATLVPLA-RGAKRCVLLGDHKQLSATICSTAASDRGLGKSLFERVLES 147
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSF---- 709
HLL++Q RMHPSI+ F N+ FY ++ S+ E+ + G +
Sbjct: 148 GGRLHLLDVQRRMHPSIAEFSNINFYEGRL------HSEVGERAKIPGLYWPASGVQVCL 201
Query: 710 --INIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
I+ + G E + S N E AVI + +A + + IG+V PY+ Q I
Sbjct: 202 VNIDALSGGETRVGTSFSNRAEAKAVIDAMVVAVEAGM---EPGDIGIVVPYSGQKTQIE 258
Query: 768 KKIGFEYE--NKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALT 825
+ + +Y + + + ++D FQG E ++I+ S VR N G IGF P+R+NV LT
Sbjct: 259 RMLESDYRLPRESVGRISINTVDAFQGSERELILFSAVRSNRDGDIGFTGDPKRMNVMLT 318
Query: 826 RARHCLWILGSERTLIS-SESIWGALVCDAKARQCFFNADE 865
RA+ L + G +TL + +E W V AK+ C E
Sbjct: 319 RAKRGLVVFGDVKTLSADTEGDWARWVHWAKSTGCMVEMAE 359
>gi|198468730|ref|XP_002134102.1| GA29178 [Drosophila pseudoobscura pseudoobscura]
gi|198146545|gb|EDY72729.1| GA29178 [Drosophila pseudoobscura pseudoobscura]
Length = 1209
Score = 140 bits (352), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 146/271 (53%), Gaps = 10/271 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 614 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 672
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + + + + F+ +
Sbjct: 673 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFL-VT 731
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E + V KI + KA V +Q IG+++PY Q + + +
Sbjct: 732 QGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGVKPEQ---IGIITPYEGQRAYLVQYMQ 788
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ ++ +++ S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA++
Sbjct: 789 YQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKY 848
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCF 860
+ I+G+ + L + + +W L+ K R+
Sbjct: 849 GIIIVGNPKVL-AKQQLWNHLLNFYKDRKVL 878
Score = 49.3 bits (116), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRT-LACTPT 315
LN SQV A+ L+R + LI GPPGTGKT T + ++ L++ T L C P+
Sbjct: 452 LNRSQVYAVKHALQRP-------LSLIQGPPGTGKTVTSATIVYQLVKQHGGTVLVCAPS 504
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ K ++P+
Sbjct: 505 NTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPV 537
>gi|351713804|gb|EHB16723.1| Regulator of nonsense transcripts 1 [Heterocephalus glaber]
Length = 1068
Score = 140 bits (352), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 133/267 (49%), Gaps = 17/267 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 585 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 643
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 644 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 703
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 704 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 760
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR
Sbjct: 761 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARP 820
Query: 830 CLWILGSERTLISSESIWGALVCDAKA 856
G SIW A D +A
Sbjct: 821 AHPQPG---------SIWSAAGPDCRA 838
Score = 50.1 bits (118), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 408 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 460
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 461 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 508
>gi|71417104|ref|XP_810474.1| regulator of nonsense transcripts 1 [Trypanosoma cruzi strain CL
Brener]
gi|70875009|gb|EAN88623.1| regulator of nonsense transcripts 1, putative [Trypanosoma cruzi]
Length = 839
Score = 140 bits (352), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 141/267 (52%), Gaps = 17/267 (6%)
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS 652
+++IDEA Q E E+ +PL + G L+GD CQL +V S ++ AG RSLFERL
Sbjct: 548 YVLIDEATQGTEPETLVPL-VRGAKQVFLVGDHCQLRPLVFSLPAERAGLRRSLFERLLM 606
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
H L++QYRMHP++SLFP+ QFY + +G + + + + F N
Sbjct: 607 TGHRAVRLDVQYRMHPALSLFPSDQFYEGTLQNGLTEEQRDASRVFPWPDPTRPIFFYNT 666
Query: 713 IGGREDFIYHSCR-NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRK 768
G E S N E + +I+ KL + G + IGV++PY Q V+
Sbjct: 667 TGSEELSANGSSYLNRAEAALTERIITKLIRD--GKVKPDDIGVITPYGGQCRYVMNYLV 724
Query: 769 KIG----FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
+ G YE V+V S+D FQG E++ II+S VR N IGF+ +R+NV++
Sbjct: 725 RCGPLPRTAYER-----VEVSSVDAFQGREKEFIILSCVRSNHRQGIGFVVDWRRLNVSI 779
Query: 825 TRARHCLWILGSERTLISSESIWGALV 851
TRA+ L I+G+ + L+S W AL+
Sbjct: 780 TRAKRGLIIMGNVQ-LLSRYPAWHALL 805
Score = 57.0 bits (136), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 8/73 (10%)
Query: 255 STLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT-VSMLLLTLLRIKCRTLACT 313
S LN SQ A+ LR + + LI GPPGTGKT T V+++L LRI+ + L C
Sbjct: 381 SNLNSSQDTAVRTALR-------NPLTLIQGPPGTGKTSTSVAIVLEVNLRIRSQILVCA 433
Query: 314 PTNVAITELASRV 326
P+NVA+ +LA R+
Sbjct: 434 PSNVAVDQLAERI 446
>gi|194889307|ref|XP_001977057.1| GG18821 [Drosophila erecta]
gi|190648706|gb|EDV45984.1| GG18821 [Drosophila erecta]
Length = 1186
Score = 140 bits (352), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 147/271 (54%), Gaps = 10/271 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 614 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 672
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + + + + F+ +
Sbjct: 673 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFL-VT 731
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI + KA + +Q IG+++PY Q + + +
Sbjct: 732 QGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQ---IGIITPYEGQRAYLVQYMQ 788
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ ++ +++ S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA++
Sbjct: 789 YQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKY 848
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCF 860
+ I+G+ + L + + +W L+ K R+
Sbjct: 849 GIIIVGNPKVL-AKQQLWNHLLNFYKDRKVL 878
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRT-LACTPT 315
LN SQV A+ L+R + LI GPPGTGKT T + ++ L+++ T L C P+
Sbjct: 452 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVKLHGGTVLVCAPS 504
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ K ++P+
Sbjct: 505 NTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPV 537
>gi|384495650|gb|EIE86141.1| hypothetical protein RO3G_10852 [Rhizopus delemar RA 99-880]
Length = 1687
Score = 140 bits (352), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 177/381 (46%), Gaps = 32/381 (8%)
Query: 481 MVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSV 540
+ + S LD N + + E+++ + + + + + +R + L Q+ ++
Sbjct: 1325 ITKIGSRLDGIHNDIRNIQIGMDEVDREITQAGSDIVQMSILRGKRK-ALAQKLAKARIA 1383
Query: 541 LRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSS-YKLHSVEIKPLNFLVIDEA 599
LR+ S++ F A + +T S S + + + +++DEA
Sbjct: 1384 LRDAHQDQRNYGQEMEISRIRARQKVFTNADVVCATLSGSGHDMMTAMGASFETVIVDEA 1443
Query: 600 AQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHL 659
+Q E S IPL+ +L+GD QLP V S ++
Sbjct: 1444 SQSVEISSLIPLKF-DTQRCILVGDPNQLPPTVMSTLA---------------------- 1480
Query: 660 LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDF 719
NIQYRMHP IS P+ FY++++ DG+ + K + EF Y F ++ G+E
Sbjct: 1481 TNIQYRMHPEISDLPSRLFYQSRLQDGSEM-DKISSAVWHALPEFPPYCFYDVRDGQEKM 1539
Query: 720 IY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKD 778
S N+ E A + ++ L K IGV++PY QV ++ + F+ D
Sbjct: 1540 GRGKSIFNVAEADAAVSLVDLLLTKLPTMKFASKIGVITPYKQQVGQLKAR--FQKRFGD 1597
Query: 779 GF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGS 836
G + ++DGFQG E++III S VR +G IGF++ +R+NV LTRA+ L++LG
Sbjct: 1598 GIVDAIDFNTVDGFQGQEKEIIIFSCVRAGSGRGIGFLADMRRMNVGLTRAKCSLYVLGH 1657
Query: 837 ERTLISSESIWGALVCDAKAR 857
+L SE WG LV DAK R
Sbjct: 1658 ANSLSRSE-YWGDLVQDAKKR 1677
Score = 50.8 bits (120), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 11/69 (15%)
Query: 277 RSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRT-----------LACTPTNVAITELASR 325
R G LI GPPGTGKTKT+ L+++LL + ++ L C P+N A+ E+ R
Sbjct: 1214 RKGFSLIQGPPGTGKTKTILALIVSLLEQRHKSTPGQPYGGSKLLVCAPSNAAVDEITKR 1273
Query: 326 VLKLVKESY 334
+ + V S+
Sbjct: 1274 LKEGVMTSH 1282
>gi|409045768|gb|EKM55248.1| hypothetical protein PHACADRAFT_28301 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1067
Score = 140 bits (352), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 162/351 (46%), Gaps = 38/351 (10%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E G VL+GD QL ++ +K + AG +SLFERL L
Sbjct: 606 VLIDEATQAAE---------PGCKQVVLVGDHQQLGPVIMNKKAARAGLTQSLFERLVVL 656
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
+ L +QYRMHP +S FP+ FY + +G + + T F
Sbjct: 657 GNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVPDTPMFFYQN 716
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E S V KI+ K +K+ V Q IGVV+PY Q I +
Sbjct: 717 LGQEEISSSGTSFLNRTEASNVEKIVTKFFKSGVVPNQ---IGVVTPYEGQRSYIVNYMQ 773
Query: 772 FEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K ++V S+D FQG E+D II+S VR N IGF++ P+R+NVALTRA++
Sbjct: 774 FNGTLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKY 833
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFN-------------ADEERNLAKA---- 872
+ ILG+ + L S +W L+ K + C + R L+KA
Sbjct: 834 GVVILGNPKVL-SKHPLWHYLLTHYKEKNCLVEGPLNNLQPSMIQFSKPRRTLSKAMDQF 892
Query: 873 -RLEV-SKELVEIGAESLTSTSQGGKKEEFEFEFVKAFRSINLIHKVLNSL 921
R E +K+ + G ++ + G F+ F + ++ I + SL
Sbjct: 893 RRHETNAKDYLSTGV--MSDARRSGTPSRFDASFYRTHDALGYIPSDVQSL 941
Score = 47.8 bits (112), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 12/99 (12%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
+ Q ++F LN SQ+ A+ + L++ + LI GPPGTGKT T + +
Sbjct: 429 RTQMPKRFSAPGLPELNHSQMYAVKSVLQK-------PLSLIQGPPGTGKTVTSASTVYH 481
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYK 335
L ++ + L C P+NVA+ +L ++ LK+V+ + K
Sbjct: 482 LAKMNPGQVLVCAPSNVAVDQLTEKIHATGLKVVRLTAK 520
>gi|389738890|gb|EIM80085.1| P-loop containing nucleoside triphosphate hydrolase protein
[Stereum hirsutum FP-91666 SS1]
Length = 806
Score = 140 bits (352), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 159/309 (51%), Gaps = 43/309 (13%)
Query: 585 SVEIKPLNFLVI--DEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGF 642
S ++ ++F V+ DEA+ E S IP+ + G H LIGD QLP ++ S+ + G
Sbjct: 443 SAALRIIDFPVVFLDEASMSTEPASLIPI-MKGSRHLALIGDHKQLPPVITSREAQVKGL 501
Query: 643 GRSLFERLTSLNHSKH-LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTG 701
G SLFERLT +L++QYRMHPSIS FP+ +FY +LDG S + L
Sbjct: 502 GISLFERLTEEGDVPSIMLDLQYRMHPSISRFPSEEFYNFSLLDGTVDASGNVRSSLLPP 561
Query: 702 TEFGTYSFINIIGGRED---FIYHSCR---------NIVEVSAVIKILQKLYKAWVGSKQ 749
T ++ ++ G+ F+ HS + N E V+KI++ L + K
Sbjct: 562 TS--SHLVLDPNTGKRPSVVFVDHSGQESSRDRSKVNWEEAGIVVKIVEDLLLSNPDLKG 619
Query: 750 KVSIGVVSPYTAQVVAIRKKIGFEYENKDGF----------------------TVKVKSI 787
+ +IG+++PY AQ+ + + + + ++++K++
Sbjct: 620 E-NIGIIAPYVAQISLLTRFLHTSTSSPSPSTSSPWSTHLLSTLGSHRCMQLPSIEIKTV 678
Query: 788 DGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIW 847
DGF+G E+DIII STVR N G IGF++ +R+NV LTRA+ L+++GS RTL ES
Sbjct: 679 DGFEGREKDIIIFSTVRNNDLGQIGFLADRRRLNVGLTRAKRGLFVVGSLRTL--RESGT 736
Query: 848 GALVCDAKA 856
G A A
Sbjct: 737 GTRSAGASA 745
>gi|448404212|ref|ZP_21572459.1| Superfamily I DNA and RNA helicase and helicase subunits-like
protein [Haloterrigena limicola JCM 13563]
gi|445663832|gb|ELZ16573.1| Superfamily I DNA and RNA helicase and helicase subunits-like
protein [Haloterrigena limicola JCM 13563]
Length = 752
Score = 140 bits (352), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 145/286 (50%), Gaps = 28/286 (9%)
Query: 566 CFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDE 625
C A + +T SS+ L + + LV+DEA Q + S IPL A + +L GD
Sbjct: 451 CDGLADVVAATNSSAATLE----REFDVLVLDEATQATCTASCIPLARA--DKVILAGDH 504
Query: 626 CQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQ----YRMHPSISLFPNLQFYRN 681
QLP ++ E+ G SLFE L + + IQ YRMH I+ FPN +FY
Sbjct: 505 KQLPPFSATEEPPESAAGLSLFEHLYADGGIYEGVGIQLRTQYRMHRDIAWFPNSRFYDR 564
Query: 682 QILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLY 741
+ G +V + +++ Y IGG E+ I HS RN EV V I +L
Sbjct: 565 ALRQGRDVTALEDRSAFVS------YD----IGGSEETIDHSKRNDAEVRLVAHIAGELL 614
Query: 742 KAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIIS 801
S +V GV++PYTAQ AIRKK+ ++ G + V +ID FQG E+ I+IS
Sbjct: 615 ADADLSSSEV--GVITPYTAQANAIRKKLARHIDS--GRDISVDTIDSFQGSEKVAIVIS 670
Query: 802 TVRCNTGGSIGFISK----PQRVNVALTRARHCLWILGSERTLISS 843
VR N G GF+ + P+R+NVA+TRA+ I+G TL SS
Sbjct: 671 LVRSNAAGETGFLGRPIDGPRRLNVAMTRAQRFCAIVGDWYTLRSS 716
>gi|301777974|ref|XP_002924403.1| PREDICTED: probable helicase senataxin-like [Ailuropoda melanoleuca]
gi|281354488|gb|EFB30072.1| hypothetical protein PANDA_013736 [Ailuropoda melanoleuca]
Length = 2691
Score = 139 bits (351), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 174/351 (49%), Gaps = 29/351 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 2188 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2246
Query: 650 LTSL--NHSKH---------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L ++ +H L +QYRMHP I LFP+ Y + ++ +
Sbjct: 2247 FYKLLEDNVEHNMIGRLPILQLTVQYRMHPDICLFPSNYVYNRSLKTNRQTETNRCSSDW 2306
Query: 699 LTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSP 758
F Y ++ G E S N+ E+ V++I+ KL K +IG+++
Sbjct: 2307 ----PFQPYLVFDVGDGSERRDNDSYVNVQEIKLVMEII-KLIKDKRRDVTFRNIGIITH 2361
Query: 759 YTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFISKP 817
Y AQ + I+K + E++ K +V ++DGFQG ++D +I++ VR NT GSIGF++
Sbjct: 2362 YKAQKMMIQKDLDKEFDRKG--PAEVDTVDGFQGRQKDCVIVTCVRANTMQGSIGFLASL 2419
Query: 818 QRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNA-DEERNLAKARLEV 876
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R D A++
Sbjct: 2420 QRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKRGAIIKTCDRNYRHDAAKILK 2478
Query: 877 SKELVE------IGAESLTSTSQGG-KKEEFEFEFVKAFRSINLIHKVLNS 920
K +++ A S QGG + + EF K + +L H +S
Sbjct: 2479 LKPVLQRSLTHPPAAAPEASRPQGGLPGNKLDSEFAKTSFTSSLYHTPSDS 2529
Score = 47.0 bits (110), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1974 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2033
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K P+ GDI L
Sbjct: 2034 IILEFKEKCK---DKKNPLGNCGDINL 2057
>gi|255564990|ref|XP_002523488.1| conserved hypothetical protein [Ricinus communis]
gi|223537316|gb|EEF38947.1| conserved hypothetical protein [Ricinus communis]
Length = 1335
Score = 139 bits (351), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 158/300 (52%), Gaps = 54/300 (18%)
Query: 903 EFVKAFRSINLIHKVLNSLGRFDELLMLENGSGNFMEAANMAVLEGDIFLATDLLQKAWN 962
+FVKA + NL+ L + DELL+LE F EAAN+A ++GD+ L DLLQ A
Sbjct: 828 KFVKALQYKNLMRTFLKNADCLDELLLLEKEWRKFSEAANIANMKGDVLLEADLLQMAQL 887
Query: 963 FREASKLVLNFVFSNSLWSPGSRGWPLKQFTQKEELLQKAKSLAKNDSNQFYEFVCAEAN 1022
F +AS ++L +VF NSLW S+GW L F +KEELL+KAK+ AKN S+ F+ F+C EAN
Sbjct: 888 FEKASTVILFYVFYNSLWVQKSKGWSLNNFAKKEELLEKAKTFAKNASSDFHGFICMEAN 947
Query: 1023 ILSNDHSNLVMMNQQFIDSKRHQNIRGEILSSRMILDFHLHSNASTYHWEDELVLNLTTY 1082
ILS H L+ + F++ + + R +++ S+ ILD +L + S + +E +L+
Sbjct: 948 ILS--HEQLL---ECFLEEWKSE--RYDVMCSK-ILDVYLPLSRSKHMFEGDLI----KC 995
Query: 1083 SDDRICKSQVSIETFVYFWNCWKDKIVKIFEYLGCLRVQQDVDGYRSYEDFCLSYFSVWK 1142
+ Q S+E +Y+W+ W ++I K+ ++
Sbjct: 996 AQSNKSWEQTSVENLLYYWDFWNEEIEKMLWFVQA------------------------- 1030
Query: 1143 HCSNLDTTYLLLKSDAYWVRELSNMYVQKRGQLVSIDLHQLVSAAQSYWSTELLSVGINV 1202
WV+ ++ +++ G L+ ID Q V AA +YWS+E L+VG+ V
Sbjct: 1031 -----------------WVKGINLRNIKRNGNLIWIDADQFVRAATTYWSSERLTVGVKV 1073
>gi|307194974|gb|EFN77064.1| Probable helicase senataxin [Harpegnathos saltator]
Length = 1415
Score = 139 bits (351), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 162/321 (50%), Gaps = 38/321 (11%)
Query: 563 EDFCFKRASLFFSTASSSY--KLHSV---EIKPLNFLVIDEAAQLKESESTIPLQLAGIN 617
ED A + T SS Y ++ S+ + L+ ++DEA Q E+E+ IPL L G+N
Sbjct: 1100 EDVILAGADIIACTLSSCYTNQMESIFGANREKLSVCIVDEATQSCEAETLIPLML-GVN 1158
Query: 618 HAVLIGDECQLPAMVESKISDEAGFGRSLFERL-----TSLNHSKHLLNIQYRMHPSISL 672
VL+GD QLPA + S+ + + G +S+F R+ + N+ +L+ QYRM SIS
Sbjct: 1159 TLVLVGDPNQLPATILSQRAKKLGLDQSIFSRMQRAFTSQTNNPIIMLDTQYRMAYSISY 1218
Query: 673 FPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFI--NIIGGREDFIYHSCRNIVEV 730
+PN FY ++ + ++ F Y + N + + F N E
Sbjct: 1219 WPNRYFYDCKLKNATELR---------ISFPFHPYRVLSHNSVQNNDRF-----SNTTEA 1264
Query: 731 SAVIKILQKL--YKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYEN-----KDGFTVK 783
V ++ + Y W + + V++GV++PY Q + KI + N + +
Sbjct: 1265 EFVSNMIYAMLIYAKWEDTNEPVTLGVLTPYNNQRTVVLNKINEKISNLPENMRKKIAYE 1324
Query: 784 VKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISS 843
V ++D FQG E DIII+S VR + IGF+S QR+ VALTRA+H L + G+ T +
Sbjct: 1325 VNTVDSFQGQERDIIIMSCVRSH---GIGFMSDKQRLCVALTRAKHSLILCGNFNTFMKD 1381
Query: 844 ESIWGALVCDAKARQCFFNAD 864
+ +W +L+ DA++R N D
Sbjct: 1382 Q-MWNSLLSDARSRGVLCNVD 1401
Score = 43.5 bits (101), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 9/55 (16%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------RIKCRTLACTPTNVAITELASRVL 327
LI GPPGTGK+K + L+ +L K + L C P+N AI E+ +R+L
Sbjct: 918 LIQGPPGTGKSKVIVNLVAQILYGEREHSNASEKNKILLCAPSNAAIDEIVTRLL 972
>gi|298707435|emb|CBJ30064.1| RNA helicase [Ectocarpus siliculosus]
Length = 1101
Score = 139 bits (351), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 139/274 (50%), Gaps = 9/274 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E+E IP+ + G VL+GD CQL +V K S +AG +SLFERL L
Sbjct: 670 VLIDEATQAMEAECLIPI-VMGAKQLVLVGDHCQLGPVVLCKKSSKAGLTQSLFERLVLL 728
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S +P+ FY + +G + ++ F +
Sbjct: 729 GIRPVRLQVQYRMHPCLSEWPSNMFYEGTLQNGVTEGERVMDQVDFPWPVPSKPMFFLMT 788
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G E+ N E +AV K + + + V Q IGVV+PY Q + +
Sbjct: 789 TGVEEISSSGTSYLNRTEATAVEKCVTRFLQKGVTPDQ---IGVVTPYEGQRSYLVDHLQ 845
Query: 772 FEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+ ++V S+D FQG E+D+I+++ VR N IGF+S P+R+NVALTRAR
Sbjct: 846 RTGSLRSSLYSEIEVASVDSFQGREKDLILLTCVRSNEHQGIGFLSDPRRLNVALTRARF 905
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
I+G+ R +++ +W ALV K +C
Sbjct: 906 GCIIIGNPR-ILAKNPLWNALVNFYKDHECLVEG 938
Score = 50.1 bits (118), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 12/81 (14%)
Query: 251 PSFSST----LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK 306
P FS+ LN SQ A+ A L+R + LI GPPGTGKT T + L+ L R
Sbjct: 494 PRFSAPGLPELNHSQFTAVKAVLQRP-------LSLIQGPPGTGKTVTSATLVYHLARQG 546
Query: 307 C-RTLACTPTNVAITELASRV 326
+ L C P+NVA+ L +++
Sbjct: 547 MGQVLVCAPSNVAVDHLTAKI 567
>gi|72389186|ref|XP_844888.1| regulator of nonsense transcripts 1 [Trypanosoma brucei TREU927]
gi|62359996|gb|AAX80419.1| regulator of nonsense transcripts 1, putative [Trypanosoma brucei]
gi|70801422|gb|AAZ11329.1| regulator of nonsense transcripts 1, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 842
Score = 139 bits (351), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 577 ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKI 636
+ Y+L +++ K ++IDEA Q E E IPL + G +L+GD CQL +V S
Sbjct: 524 GAGDYRLKTMKFK---HVLIDEATQGTEPEVLIPL-VRGAKQVILVGDHCQLRPLVFSTA 579
Query: 637 SDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK 696
+++AG+ RSLFERL + H L++QYRM+PS+S FP+ +Y + +G + + +
Sbjct: 580 AEKAGYQRSLFERLVLMGHRPVRLDVQYRMNPSLSFFPSHHYYEGTLQNGVTAEQRDASE 639
Query: 697 QYLTGTEFGTYSFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGV 755
+ F N G E S N E + +I+ KL + V + IGV
Sbjct: 640 VFPWPDVTKPIFFYNATGNEELGSNGRSYLNRAEAALTEQIVTKLIQGGV---EPGDIGV 696
Query: 756 VSPYTAQVVAIRK------KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGG 809
++PY +Q +R ++ E ++ V++ S+D FQG E++ II+S VR N
Sbjct: 697 ITPYRSQCRYLRSYLSRSGRLPMEVYDR----VEISSVDAFQGREKEFIILSCVRSNHRQ 752
Query: 810 SIGFISKPQRVNVALTRARHCLWILGS 836
GF++ +R+NV+LTRA+ L I+G+
Sbjct: 753 GAGFVTDGRRLNVSLTRAKRGLIIMGN 779
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 53/107 (49%), Gaps = 14/107 (13%)
Query: 238 SVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSM 297
+ R +D + P LN SQ A+ LR + + LI GPPGTGKT T
Sbjct: 353 AAHRNSGFDTEPEPRGHHNLNYSQEQALRVALR-------NPLTLIQGPPGTGKTSTSVA 405
Query: 298 LLLTL-LRIKCRTLACTPTNVAITELASRV----LKLVK--ESYKRD 337
++ L +K R L C P+NVA+ LA RV LK+V+ Y+ D
Sbjct: 406 IIRELHSHVKSRILVCAPSNVAVDHLAQRVSGTGLKVVRLQAKYRND 452
>gi|261328192|emb|CBH11169.1| nonsense mRNA reducing factor 1, putative [Trypanosoma brucei
gambiense DAL972]
Length = 842
Score = 139 bits (351), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 577 ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKI 636
+ Y+L +++ K ++IDEA Q E E IPL + G +L+GD CQL +V S
Sbjct: 524 GAGDYRLKTMKFK---HVLIDEATQGTEPEVLIPL-VRGAKQVILVGDHCQLRPLVFSTA 579
Query: 637 SDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK 696
+++AG+ RSLFERL + H L++QYRM+PS+S FP+ +Y + +G + + +
Sbjct: 580 AEKAGYQRSLFERLVLMGHRPVRLDVQYRMNPSLSFFPSHHYYEGTLQNGVTAEQRDASE 639
Query: 697 QYLTGTEFGTYSFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGV 755
+ F N G E S N E + +I+ KL + V + IGV
Sbjct: 640 VFPWPDVTKPIFFYNATGNEELGSNGRSYLNRAEAALTEQIVTKLIQGGV---EPGDIGV 696
Query: 756 VSPYTAQVVAIRK------KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGG 809
++PY +Q +R ++ E ++ V++ S+D FQG E++ II+S VR N
Sbjct: 697 ITPYRSQCRYLRSYLSRSGRLPMEVYDR----VEISSVDAFQGREKEFIILSCVRSNHRQ 752
Query: 810 SIGFISKPQRVNVALTRARHCLWILGS 836
GF++ +R+NV+LTRA+ L I+G+
Sbjct: 753 GAGFVTDGRRLNVSLTRAKRGLIIMGN 779
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 53/107 (49%), Gaps = 14/107 (13%)
Query: 238 SVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSM 297
+ R +D + P LN SQ A+ LR + + LI GPPGTGKT T
Sbjct: 353 AAHRNSGFDTEPEPRGHHNLNYSQEQALRVALR-------NPLTLIQGPPGTGKTSTSVA 405
Query: 298 LLLTL-LRIKCRTLACTPTNVAITELASRV----LKLVK--ESYKRD 337
++ L +K R L C P+NVA+ LA RV LK+V+ Y+ D
Sbjct: 406 IIRELHSHVKSRILVCAPSNVAVDHLAQRVSGTGLKVVRLQAKYRND 452
>gi|226481521|emb|CAX73658.1| Regulator of nonsense transcripts 1 [Schistosoma japonicum]
Length = 731
Score = 139 bits (351), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 137/262 (52%), Gaps = 10/262 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL + G VL+GD CQL ++ K + AG +SLFER L
Sbjct: 74 VLIDESTQATEPECLIPL-MVGCRQVVLVGDHCQLGPVITCKKAASAGLTQSLFERFVLL 132
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + +K F
Sbjct: 133 GIRPIRLQVQYRMHPALSAFPSNVFYEGSLQNGVTAEDRC-KKTDFPWPNPDRPMFFYCT 191
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ + N E + V KI+ K+ K V +IGV++PY Q + +
Sbjct: 192 SGQEEISGNGVSYLNRTEAATVEKIVTKMLKIGV---HPNTIGVITPYEGQRAYLAHYLH 248
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+ K +++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 249 YSGSLNAKLYQEIEIASVDAFQGREKDYIILSCVRANENQGIGFLNDPRRLNVALTRARY 308
Query: 830 CLWILGSERTLISSESIWGALV 851
L ++G+ + L + +W L+
Sbjct: 309 GLIVVGNPKALC-KQPLWNQLL 329
>gi|401885778|gb|EJT49866.1| ATP dependent helicase [Trichosporon asahii var. asahii CBS 2479]
Length = 1013
Score = 139 bits (351), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 132/251 (52%), Gaps = 8/251 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DEA Q E E+ IPL + G AVL+GD QL ++ +K + AG +SLFERL L
Sbjct: 574 VLVDEATQAAEPEAMIPL-VMGCKQAVLVGDHQQLGPVIMNKKAARAGLSQSLFERLVIL 632
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
+ L +QYRMHP +S FP+ FY + +G + + T +
Sbjct: 633 GNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVADTPMMFHQN 692
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G E+ N E + V K++ K +K+ V Q IGV++PY Q I +
Sbjct: 693 TGTEEISSSGTSFVNRTEAANVEKMVTKFFKSGVLPSQ---IGVITPYEGQRSFIVSYMQ 749
Query: 772 FEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
K V+V S+D FQG E+D II+S VR N IGF++ P+R+NVALTRA++
Sbjct: 750 LHGALKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKY 809
Query: 830 CLWILGSERTL 840
+ ILG+ + L
Sbjct: 810 GVVILGNPKVL 820
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
+ Q ++F LN SQ+ A+ A L++ + LI GPPGTGKT T + ++
Sbjct: 397 RTQMPKRFTAPGLPELNHSQMAAVKAVLQK-------PLSLIQGPPGTGKTVTSASIVYH 449
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L ++ + L C P+NVA+ LA ++ LK+V+ + K ++P+
Sbjct: 450 LSKMNPGQVLVCAPSNVAVDHLAEKIHMTGLKVVRLTAKSREAVDSPV 497
>gi|406695570|gb|EKC98873.1| hypothetical protein A1Q2_06844 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1000
Score = 139 bits (351), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 132/251 (52%), Gaps = 8/251 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DEA Q E E+ IPL + G AVL+GD QL ++ +K + AG +SLFERL L
Sbjct: 561 VLVDEATQAAEPEAMIPL-VMGCKQAVLVGDHQQLGPVIMNKKAARAGLSQSLFERLVIL 619
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
+ L +QYRMHP +S FP+ FY + +G + + T +
Sbjct: 620 GNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVADTPMMFHQN 679
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G E+ N E + V K++ K +K+ V Q IGV++PY Q I +
Sbjct: 680 TGTEEISSSGTSFVNRTEAANVEKMVTKFFKSGVLPSQ---IGVITPYEGQRSFIVSYMQ 736
Query: 772 FEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
K V+V S+D FQG E+D II+S VR N IGF++ P+R+NVALTRA++
Sbjct: 737 LHGALKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKY 796
Query: 830 CLWILGSERTL 840
+ ILG+ + L
Sbjct: 797 GVVILGNPKVL 807
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
+ Q ++F LN SQ+ A+ A L++ + LI GPPGTGKT T + ++
Sbjct: 384 RTQMPKRFTAPGLPELNHSQMAAVKAVLQK-------PLSLIQGPPGTGKTVTSASIVYH 436
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L ++ + L C P+NVA+ LA ++ LK+V+ + K ++P+
Sbjct: 437 LSKMNPGQVLVCAPSNVAVDHLAEKIHMTGLKVVRLTAKSREAVDSPV 484
>gi|417407073|gb|JAA50163.1| Putative dna helicase [Desmodus rotundus]
Length = 2735
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 152/282 (53%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 2236 PFSCVIVDEAGQACEVETLTPL-IHRCNKLILVGDPKQLPPTVISLKAQEYGYDQSMMAR 2294
Query: 650 LTSL-------NHSKHL----LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L N S L LN+QYRMHP I LFP+ Y N+K+ +
Sbjct: 2295 FCKLLEENVEHNVSGRLPVLQLNVQYRMHPDICLFPSNYVY------SRNLKTNRVTETI 2348
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
+E F Y ++ G E S N+ E+ VI+++ KL K ++G++
Sbjct: 2349 RCSSEWPFQPYLVFDVGDGLERRDNDSYVNVQEIKVVIELI-KLLKDKRKDVTFRNVGII 2407
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ + I+K++ E+E K +V ++D FQG ++D II++ VR N GSIGF++
Sbjct: 2408 THYKAQKMMIQKELDKEFEGKG--LAEVDTVDAFQGRQKDCIIVTCVRANAVQGSIGFLA 2465
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+ VA+TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 2466 SLQRLTVAITRAKYSLFILGHLRTLMDNQH-WNHLIQDAQRR 2506
Score = 46.6 bits (109), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 42/85 (49%), Gaps = 17/85 (20%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL-------------RIK-CRTLACTPTNVAITELASRVL 327
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +++
Sbjct: 2024 LIHGPPGTGKSKTIVGLLYRLLTERRGHFNENSNAKIKQNRVLVCAPSNAAVDELMKKII 2083
Query: 328 KLVKESYKRDSRSNTPICPLGDILL 352
KE K P+ GDI L
Sbjct: 2084 IEFKERCK---DKKNPMGNCGDINL 2105
>gi|195480688|ref|XP_002101353.1| GE17585 [Drosophila yakuba]
gi|194188877|gb|EDX02461.1| GE17585 [Drosophila yakuba]
Length = 1187
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 146/271 (53%), Gaps = 10/271 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 614 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 672
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + + + + F+ +
Sbjct: 673 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFL-VT 731
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E + V KI + KA + +Q IG+++PY Q + + +
Sbjct: 732 QGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQ---IGIITPYEGQRAYLVQYMQ 788
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ ++ +++ S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA++
Sbjct: 789 YQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKY 848
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCF 860
+ I+G+ + L + + +W L+ K R+
Sbjct: 849 GIIIVGNPKVL-AKQQLWNHLLNFYKDRKVL 878
Score = 50.8 bits (120), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRT-LACTPT 315
LN SQV A+ L+R + LI GPPGTGKT T + ++ L+++ T L C P+
Sbjct: 452 LNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQLVKLHGGTVLVCAPS 504
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ K ++P+
Sbjct: 505 NTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPV 537
>gi|195165354|ref|XP_002023504.1| GL20400 [Drosophila persimilis]
gi|194105609|gb|EDW27652.1| GL20400 [Drosophila persimilis]
Length = 879
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 146/271 (53%), Gaps = 10/271 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 284 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 342
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + + + + F+ +
Sbjct: 343 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFL-VT 401
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E + V KI + KA V +Q IG+++PY Q + + +
Sbjct: 402 QGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGVKPEQ---IGIITPYEGQRAYLVQYMQ 458
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ ++ +++ S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA++
Sbjct: 459 YQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKY 518
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCF 860
+ I+G+ + L + + +W L+ K R+
Sbjct: 519 GIIIVGNPKVL-AKQQLWNHLLNFYKDRKVL 548
Score = 49.3 bits (116), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRT-LACTPT 315
LN SQV A+ L+R + LI GPPGTGKT T + ++ L++ T L C P+
Sbjct: 122 LNRSQVYAVKHALQRP-------LSLIQGPPGTGKTVTSATIVYQLVKQHGGTVLVCAPS 174
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N A+ +L ++ LK+V+ K ++P+
Sbjct: 175 NTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPV 207
>gi|407400115|gb|EKF28555.1| regulator of nonsense transcripts 1, putative,nonsense mRNA
reducing factor 1, putative [Trypanosoma cruzi
marinkellei]
Length = 839
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 140/269 (52%), Gaps = 21/269 (7%)
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS 652
+++IDEA Q E E+ +PL + G L+GD CQL +V S + AG RSLFERL
Sbjct: 548 YVLIDEATQGTEPETLVPL-VRGAKQVFLLGDHCQLRPIVFSLPVERAGLRRSLFERLLL 606
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
H L++QYRMHP++SLFP+ QFY + +G + + + + F N
Sbjct: 607 TGHRAVRLDVQYRMHPALSLFPSDQFYEGTLQNGLTEEQRDASQVFPWPDPTRPIFFYNT 666
Query: 713 IGGREDFIYHSCR-NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR---- 767
G E S N E + +I+ KL + G + IGV++PY Q +
Sbjct: 667 TGSEEVSANGSSYLNRAEAALTERIITKLIQD--GKVKPDDIGVITPYGGQCRYLMNYLL 724
Query: 768 -----KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNV 822
K +E +V+V S+D FQG E++ II+S VR N IGF+ +R+NV
Sbjct: 725 RCGPLPKTAYE-------SVEVSSVDAFQGREKEFIILSCVRSNHRQGIGFVVDWRRLNV 777
Query: 823 ALTRARHCLWILGSERTLISSESIWGALV 851
++TRA+ L I+G+ + L+S +W AL+
Sbjct: 778 SITRAKRGLIIMGNVQ-LLSRYPVWHALL 805
Score = 50.4 bits (119), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 255 STLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTL-LRIKCRTLACT 313
S LN SQ A+ LR + + LI GPPGTGKT T ++ L R + L C
Sbjct: 381 SNLNSSQDAAVRTALR-------NPLTLIQGPPGTGKTSTSVAIVRELHRRTHSQILVCA 433
Query: 314 PTNVAITELASRV 326
P+NVA+ +LA R+
Sbjct: 434 PSNVAVDQLAERI 446
>gi|340369264|ref|XP_003383168.1| PREDICTED: regulator of nonsense transcripts 1-like [Amphimedon
queenslandica]
Length = 1081
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 162/325 (49%), Gaps = 19/325 (5%)
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS 652
++IDE+ Q E E +P+ + G VL+GD CQL ++ K + A +SLFERL
Sbjct: 615 MVLIDESTQATEPECMVPI-VMGSKQVVLVGDHCQLGPVIMCKKAANARLSQSLFERLVL 673
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
LN L +QYRMHP+++ FP+ FY + + + + + ++ F
Sbjct: 674 LNIKPIRLEVQYRMHPALTEFPSSVFYDGTLQNAVSPEERRMDEVNFPWPNVDKPMFFWC 733
Query: 713 IGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
G+E+ S N E V K++ KL K V + V IGV++PY Q + +++
Sbjct: 734 SFGQEEISSSGTSYLNRTEAVNVEKVVTKLMKNGV---KPVQIGVITPYEGQRAYVVQQM 790
Query: 771 GFE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
F +K ++V S+D FQG E+D II+S VR N IGF++ +R+NVALTRA+
Sbjct: 791 QFNGGMSSKLYEQLEVASVDAFQGREKDFIILSCVRSNEHQGIGFLNDARRLNVALTRAK 850
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKEL-------- 880
+ + I+G+ + L +E +W L+ + + Q NL + + +SK +
Sbjct: 851 YGVIIIGNAKVLSRNE-LWHHLIKEYQ-EQGLLVEGPLNNLRRNEMHLSKPVKMRKYIPR 908
Query: 881 -VEIGAESLTSTSQGGKKEEFEFEF 904
V E L +T G + +E F
Sbjct: 909 AVYSAKEYLETTGAGNQSRPYEVGF 933
Score = 49.7 bits (117), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 22/208 (10%)
Query: 147 LRRVGRT---WTFVS-VTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNIL 202
LR VGR+ W + VT VP E ++ R+N+ V + F ++
Sbjct: 342 LRYVGRSHEPWNGIGHVTKVPSSFAE-----EVGLELRSNVNVPTSCTRDFCVDFVWKST 396
Query: 203 PNKRIWNSLHMCG-NWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQ 261
R+ N+L + + ++ L + E E ++ Q + F LN SQ
Sbjct: 397 SFDRMQNALKLIAVDEGSVSTYLYHRLLGHEVLEEPAIIIHKQLPKHFSAPNLPKLNPSQ 456
Query: 262 VGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC-RTLACTPTNVAIT 320
+ A+ L++ + LI GPPGTGKT T + ++ L ++ + L C P+N+A+
Sbjct: 457 IYAVKTVLQK-------PLGLIQGPPGTGKTVTSATIVYHLSKMGMGQVLVCAPSNIAVD 509
Query: 321 ELASRV----LKLVKESYKRDSRSNTPI 344
+L ++ LK+V+ K ++P+
Sbjct: 510 QLTEKIHKTGLKVVRLCAKSREAIDSPV 537
>gi|341881801|gb|EGT37736.1| hypothetical protein CAEBREN_04117 [Caenorhabditis brenneri]
Length = 1054
Score = 139 bits (350), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 154/319 (48%), Gaps = 30/319 (9%)
Query: 559 KLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINH 618
K V E A + T SS+ +I+ L IDE+ Q E E + + + G+
Sbjct: 567 KRVKEHDLLAAADVICCTCSSAADARLTKIRTRTVL-IDESTQATEPEILVSI-VRGVRQ 624
Query: 619 AVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQF 678
VL+GD CQL +V K + AG +SLFERL L L +QYRMHP +S FP+ F
Sbjct: 625 LVLVGDHCQLGPVVICKKAAMAGLSQSLFERLVLLGIRPFRLQVQYRMHPVLSEFPSNAF 684
Query: 679 YRNQILDGANVKSKSYEKQYLTGTEF-----GTYSFINIIGGREDFIYHSCR--NIVEVS 731
Y + +G + Y+ G ++ +F G E+ N E +
Sbjct: 685 YDGSLQNGVTENDR-----YMKGVDWHWPTHNKPAFFWHCSGAEELSASGTSFLNRTEAA 739
Query: 732 AVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGF-------TVKV 784
V K++ KL K G Q + IGV++PY Q I Y + G +V++
Sbjct: 740 NVEKLVSKLIK---GGVQPLQIGVITPYEGQRSFI-----VNYMHTQGTLNSKLYESVEI 791
Query: 785 KSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSE 844
S+D FQG E+D II++ VR N IGF+S P+R+NVA+TRA++ + ++G+ + L S
Sbjct: 792 ASVDAFQGREKDYIIVTCVRSNDALGIGFLSDPRRLNVAITRAKYGMVVVGNAKVL-SRH 850
Query: 845 SIWGALVCDAKARQCFFNA 863
+W L+ K + +
Sbjct: 851 ELWYELINHFKKKDMLYEG 869
Score = 49.3 bits (116), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL-RIKCRTLACTPT 315
LN SQ+ A+ L R + LI GPPGTGKT + ++ L+ + + L C+P+
Sbjct: 440 LNSSQMQAVKQVLTR-------PLSLIQGPPGTGKTVVSATIVYHLVKKTEGNVLVCSPS 492
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N+A+ LA ++ LK+V+ + K ++T I
Sbjct: 493 NIAVDHLAEKIHKTGLKVVRLTAKSREHTDTTI 525
>gi|303275724|ref|XP_003057156.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461508|gb|EEH58801.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1100
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 132/255 (51%), Gaps = 16/255 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DE+ Q E E IPL + G V++GD CQL +V K + AG G+SLFERL L
Sbjct: 638 VLMDESTQATEPECLIPL-IMGAKQVVMVGDHCQLGPVVACKKAARAGLGQSLFERLILL 696
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + + T +
Sbjct: 697 GVQPIRLQVQYRMHPCLSEFPSNTFYEGALQNGVAAAERLMTHVNFPWPKPSTPMMFWSM 756
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRK 768
G E+ N E +V KI+ +A V + ++GVV+PY Q VV
Sbjct: 757 TGAEEISASGTSYLNRTEAVSVEKIVTHFLRAGVAPE---ALGVVTPYEGQRAYVVQHMT 813
Query: 769 KIGF---EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALT 825
+ G + N+ ++V S+D FQG E+D II+S VR N IGF++ P+R+NVA+T
Sbjct: 814 RAGVLRQQLYNE----IQVASVDSFQGREKDFIILSCVRSNEKAGIGFLNDPRRLNVAMT 869
Query: 826 RARHCLWILGSERTL 840
RAR L ILG+ + L
Sbjct: 870 RARSGLVILGNPKVL 884
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACTPT 315
LN SQV A+ + LRR + LI GPPGTGKT T + ++ L + + + + C P+
Sbjct: 474 LNHSQVNAVASVLRRP-------LSLIQGPPGTGKTVTSATIVYHLAQQNQGQVIVCAPS 526
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
NVA+ +LA ++ LK+V+ + K +P+
Sbjct: 527 NVAVDQLAEKIEQTGLKVVRVAAKSREAVLSPV 559
>gi|440299116|gb|ELP91723.1| hypothetical protein EIN_520800 [Entamoeba invadens IP1]
Length = 1079
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/253 (39%), Positives = 143/253 (56%), Gaps = 26/253 (10%)
Query: 595 VIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLN 654
+IDEAAQ E E+ A +N V+IGD QLP + S + E G +S+FERL LN
Sbjct: 585 LIDEAAQSIEPETFSAF--AKVNKIVMIGDIQQLPPTILSDEAKEGGLEKSMFERLL-LN 641
Query: 655 HSKH-LLNIQYRMHPSISLFPNLQFYRNQILDG--ANVKSKSYEKQYLTGTEFGTYSFIN 711
+ LLN QY MHP+IS F N FYR ++ DG AN +S + + + EF F++
Sbjct: 642 KVPYVLLNTQYLMHPAISKFSNEFFYRGKLNDGVTANERSDNRINKIFSKKEFPV-MFVH 700
Query: 712 IIGGREDFIYHSCR----NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
G D Y S N E V +++K K + ++ IG++SPY+ Q R
Sbjct: 701 CKG---DEGYGSSGKSYGNDAEKEVVKFLVEKYNKEGINDEE---IGIISPYSTQ----R 750
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+G +++ T++V S+DGFQG E++ IIIS VR N+ G IGF++ +R+NVALTRA
Sbjct: 751 DLLGEQHK-----TIQVASVDGFQGNEKEFIIISCVRSNSKGGIGFLADHRRLNVALTRA 805
Query: 828 RHCLWILGSERTL 840
R L ++G TL
Sbjct: 806 RKGLVMVGDAYTL 818
>gi|440792662|gb|ELR13871.1| mRNA decay factorlike protein [Acanthamoeba castellanii str. Neff]
Length = 1142
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 139/286 (48%), Gaps = 39/286 (13%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +PL L G + +GD CQL ++ K + AG +SLFERL L
Sbjct: 665 VLIDESTQATEPECLLPLVL-GAKQVIFVGDHCQLGPVIMCKKAARAGLSQSLFERLIML 723
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G ++ G F +
Sbjct: 724 GVRPIRLQVQYRMHPCLSEFPSNTFYEGTLQNGVTAAERNQ----------GALDFPWPV 773
Query: 714 GGREDFIYH------------SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTA 761
+ F Y+ S N E + KI+ +A V S Q IGV++PY
Sbjct: 774 PNKPMFFYNCLGQEEISSSGTSYLNRNEAAVCEKIVTHFLQAGVTSAQ---IGVITPYEG 830
Query: 762 QVVAIRKKIGFEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFI 814
Q + Y ++G ++V S+D FQG E+D II+S VR N IGF+
Sbjct: 831 QRAYL-----VNYMQRNGSLRSQLYKEIEVASVDSFQGREKDFIILSCVRSNEHQGIGFL 885
Query: 815 SKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
+ P+R+NVALTRA++ + +LG+ + L S + +W L+ K C
Sbjct: 886 NDPRRLNVALTRAKYGVVVLGNAKVL-SRQPLWNNLLVHFKENGCL 930
Score = 49.7 bits (117), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACTPT 315
LN SQV A+ + L++ + LI GPPGTGKT T + + L++ + + L C P+
Sbjct: 499 LNHSQVAAVKSVLQKP-------LSLIQGPPGTGKTVTSASTVYQLVKQNQGQVLVCAPS 551
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
NVA+ +L ++ LK+V+ K ++P+
Sbjct: 552 NVAVDQLTEKIHATGLKVVRLCAKSREAVSSPV 584
>gi|328866870|gb|EGG15253.1| hypothetical protein DFA_10087 [Dictyostelium fasciculatum]
Length = 854
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 145/276 (52%), Gaps = 12/276 (4%)
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS 652
+V+DEA Q E IPL L L GD+ QL ++ S + E G S+F+RL
Sbjct: 455 IIVVDEATQATEPAILIPL-LKSSEQMYLFGDQNQLAPIILSHKAIEGGLNISMFDRLFK 513
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSF--- 709
+ LLN QYRMH SIS FP FY + +G N + G ++ F
Sbjct: 514 SGLTPFLLNTQYRMHSSISDFPRHHFYNGLLNNGTN----DSNLKIPIGIKWPQIDFPVV 569
Query: 710 -INIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
I+I GRE+ +HS N E AV+++ + L + S + +IG+++PY AQV I +
Sbjct: 570 FIDISNGREEIKHHSLYNNEEAVAVVQVAESLLEN-DESLFRNNIGIITPYHAQVKHINQ 628
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
+ + G V ++D +QG E D+II STVR NT G+IGF+ +R+NV++TRA+
Sbjct: 629 VFSNDKSWR-GAQPSVATVDSYQGREMDVIIFSTVRSNTKGNIGFLKDWRRLNVSITRAK 687
Query: 829 HCLWILGSERTL-ISSESIWGALVCDAKARQCFFNA 863
L ++G+ T+ SS+ W A V AK + +
Sbjct: 688 RGLVVIGNFGTINNSSDEHWKAYVQWAKDKNIMVKS 723
>gi|300176550|emb|CBK24215.2| unnamed protein product [Blastocystis hominis]
Length = 939
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 145/270 (53%), Gaps = 9/270 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DE+ Q +E E IP+ + G + +L+GD QL +++ + + A F SLFERL SL
Sbjct: 582 VLVDESTQAREPECLIPI-VNGCDRLILVGDHKQLGPVIQDQEAKRAEFDISLFERLLSL 640
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
+ LNIQYRMHP++S+FP+ FY N L A S+ +
Sbjct: 641 GIKPYCLNIQYRMHPALSIFPSNMFY-NGALKNAVHSSERTRNLAFPWPRSDMPMMFWCV 699
Query: 714 GGRED--FIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G ED S N +E + V K++++ + + IGV++PY +Q +R+ +
Sbjct: 700 QGSEDPGSSGRSFLNRMEATCVEKVVERFINCGIPGDR---IGVITPYDSQRTLLRQVLS 756
Query: 772 FEYENKDGF-TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
E + V++ S+D FQG E D II S VR N+ G +GF++ +R+NVA+TRA++
Sbjct: 757 RHMEKAEEVKKVEIASVDEFQGRENDYIIFSCVRSNSDGVLGFLNDMRRLNVAITRAKYG 816
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCF 860
+ I+G+ TL S IW L+ + +C
Sbjct: 817 IVIIGNPNTL-RSHPIWVELMNHFQMNKCL 845
Score = 43.9 bits (102), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLR-IKCRTLACTPTNVAITELASRVLKL 329
LI GPPGTGKT + ++ +++ K R L C P+N+A+ L R+ +L
Sbjct: 437 LIQGPPGTGKTVVSATIIYHIVKSYKQRVLVCAPSNIAVDNLTLRLHRL 485
>gi|402470074|gb|EJW04529.1| hypothetical protein EDEG_01257 [Edhazardia aedis USNM 41457]
Length = 534
Score = 138 bits (348), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 147/279 (52%), Gaps = 21/279 (7%)
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS 652
+++IDEA Q E S IPL G +L+GD QL ++ K + +AG +LFERL
Sbjct: 247 YVLIDEAVQCTEPLSIIPLAY-GCRKLILVGDHKQLGPIILDKKAAKAGLKETLFERLIK 305
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L + LLN+QYRMHP ++ +P+ FY + +G + E + L T +F +
Sbjct: 306 LGNLPFLLNMQYRMHPKLAEWPSNTFYEGSLKNGIS------ESKRLNRTVLPFPTFFYV 359
Query: 713 IGGREDFIYHSCRNIVEVSAVI--KILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK-- 768
G E+ + + A++ +I++ L K+ + KQ IGV++PY Q V I
Sbjct: 360 CYGLEELSASGTSYLNQTEALVTEEIIKSLVKSGISEKQ---IGVITPYEGQRVFILNRL 416
Query: 769 -KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
K + EN +++K++D +QG E+D IIIS VR N IGF++ +R+NV LTRA
Sbjct: 417 TKTSLKLEN-----LEIKNVDAYQGREKDYIIISLVRSNQKQGIGFLNDERRLNVTLTRA 471
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEE 866
++ I+G+ TL ++ +W + + R + E
Sbjct: 472 KYGCCIIGNPNTLYKNK-MWANFINFYQDRDMIYKGSVE 509
>gi|18859757|ref|NP_572767.1| Upf1 [Drosophila melanogaster]
gi|27923995|sp|Q9VYS3.2|RENT1_DROME RecName: Full=Regulator of nonsense transcripts 1 homolog
gi|16769416|gb|AAL28927.1| LD30316p [Drosophila melanogaster]
gi|22832121|gb|AAF48115.2| Upf1 [Drosophila melanogaster]
gi|220960128|gb|ACL92600.1| Upf1-PA [synthetic construct]
Length = 1180
Score = 138 bits (348), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 145/271 (53%), Gaps = 10/271 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 614 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 672
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + + + + F+ +
Sbjct: 673 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFL-VT 731
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E + V KI + KA + +Q IG+++PY Q + + +
Sbjct: 732 QGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQ---IGIITPYEGQRAYLVQYMQ 788
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ ++ +++ S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA+
Sbjct: 789 YQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKF 848
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCF 860
+ I+G+ + L + + +W L+ K R+
Sbjct: 849 GIIIVGNPKVL-AKQQLWNHLLNFYKDRKVL 878
Score = 52.0 bits (123), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
+G + F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 437 RGPQPKLFSAPHLPDLNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQ 489
Query: 302 LLRIKCRT-LACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L+++ T L C P+N A+ +L ++ LK+V+ K ++P+
Sbjct: 490 LVKLHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPV 537
>gi|145343349|ref|XP_001416310.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576535|gb|ABO94603.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 315
Score = 138 bits (348), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 140/293 (47%), Gaps = 22/293 (7%)
Query: 588 IKPLNFLVIDEAAQLKESESTIPLQLAGINHAV-LIGDECQLPAMVESKISDEAGFGRSL 646
++P + ++IDEA+Q E + IPLQ + + ++GD QL V S+ + A +G SL
Sbjct: 24 VQPFDVVIIDEASQAVEPAALIPLQWIKPDGVIIMVGDSQQLAPTVISRSAQRAYYGYSL 83
Query: 647 FERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGT 706
FERL+ L QYRMHP I FP+ +FYR + GA + + + + G
Sbjct: 84 FERLSDCGVPTFTLRDQYRMHPDIVKFPSERFYRGLLRSGAGALYEDRVAPWHSFSNCGP 143
Query: 707 YSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQ----KVSIGVVSPYTAQ 762
Y F N+ G Y + SA + YK S Q +V +G+++PY Q
Sbjct: 144 YQFFNVKGQMNQDRYETGARSFSNSAEAEFASYCYKKIAVSAQLHKSEVKVGIITPYLDQ 203
Query: 763 VVAIRKKIGFEYENKDGFT-----VKVKSIDGFQGGEEDIIIISTVRCNTGG-------- 809
V +R + KDG V ++D QG E D +IIS VR G
Sbjct: 204 VRRLRDFVE-PLLKKDGALRTWAHVTYGTVDQVQGQEFDAVIISCVRAYPEGDKVAPDPP 262
Query: 810 --SIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
IGF+ +R+NVALTR R+ WI+G L E++W L+ +AK R F
Sbjct: 263 NTDIGFLRDERRLNVALTRGRYSTWIVGYAEVL-KREAVWLDLIENAKTRNVF 314
>gi|320168749|gb|EFW45648.1| RENT1 [Capsaspora owczarzaki ATCC 30864]
Length = 1120
Score = 138 bits (348), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 139/262 (53%), Gaps = 12/262 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DEA Q E E+ IP+ + G VL+GD CQL +V K + +A F +SLFERL
Sbjct: 663 VLVDEATQATEPEAIIPIVM-GAKQVVLVGDHCQLGPVVMCKKAAKANFTQSLFERLVMG 721
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
+ L IQYRMHP +S FP+ FY + +G ++ + T + F
Sbjct: 722 QNRPIRLEIQYRMHPCLSAFPSDTFYEGSLQNGVLAADRTPKTPAFTWPDPNNPMFFWSN 781
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E S+V K++ +L K+ Q IGV++PY Q I + +
Sbjct: 782 LGQEELSASGTSYLNRAEASSVEKLVTQLLKSGTKPDQ---IGVITPYEGQRAFILQTMT 838
Query: 772 FEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+ ++V S+D FQG E+D II+S VR IGF++ P+R+NVALTRAR+
Sbjct: 839 ANGVLRSQLYQQIEVASVDAFQGREKDYIILSCVRS---AGIGFLNDPRRLNVALTRARY 895
Query: 830 CLWILGSERTLISSESIWGALV 851
L ++G+ L + + +W ++
Sbjct: 896 GLVVIGNAHRL-ARDPLWNEVI 916
Score = 50.8 bits (120), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 12/83 (14%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTN 316
LNESQ+ A+ LR LI GPPGTGKT T + L+ L + + L C P+N
Sbjct: 503 LNESQMSAITRVLREP-------FSLIQGPPGTGKTVTSATLVYHLSKFG-QVLVCAPSN 554
Query: 317 VAITELASRV----LKLVKESYK 335
+A+ +L R+ LK+V+ + K
Sbjct: 555 IAVDQLTERIHRTGLKVVRLAAK 577
>gi|417414131|gb|JAA53366.1| Putative dna helicase, partial [Desmodus rotundus]
Length = 2488
Score = 138 bits (348), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 153/282 (54%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 1989 PFSCVIVDEAGQACEVETLTPL-IHRCNKLILVGDPKQLPPTVISLKAQEYGYDQSMMAR 2047
Query: 650 LTSL-------NHSKHL----LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L N S L LN+QYRMHP I LFP+ Y N+K+ +
Sbjct: 2048 FCKLLEENVEHNVSGRLPVLQLNVQYRMHPDICLFPSNYVY------SRNLKTNRVTETI 2101
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
+E F Y ++ G E S N+ E+ VI+++ KL K ++G++
Sbjct: 2102 RCSSEWPFQPYLVFDVGDGLERRDNDSYVNVQEIKVVIELI-KLLKDKRKDVTFRNVGII 2160
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ + I+K++ E+E K G +V ++D FQG ++D II++ VR N GSIGF++
Sbjct: 2161 THYKAQKMMIQKELDKEFEGK-GL-AEVDTVDAFQGRQKDCIIVTCVRANAVQGSIGFLA 2218
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+ VA+TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 2219 SLQRLTVAITRAKYSLFILGHLRTLMDNQH-WNHLIQDAQRR 2259
Score = 46.2 bits (108), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 42/85 (49%), Gaps = 17/85 (20%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL-------------RIK-CRTLACTPTNVAITELASRVL 327
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +++
Sbjct: 1777 LIHGPPGTGKSKTIVGLLYRLLTERRGHFNENSNAKIKQNRVLVCAPSNAAVDELMKKII 1836
Query: 328 KLVKESYKRDSRSNTPICPLGDILL 352
KE K P+ GDI L
Sbjct: 1837 IEFKERCK---DKKNPMGNCGDINL 1858
>gi|294946503|ref|XP_002785099.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239898511|gb|EER16895.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 422
Score = 138 bits (348), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 137/281 (48%), Gaps = 19/281 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDE Q E + +PL G VL+GD QL A + S + E G G+SLFER+
Sbjct: 99 VVIDECTQATEPATLVPLT-RGAKRCVLLGDHKQLSATICSTAASERGLGKSLFERVLES 157
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSF---- 709
HLL++Q RMHPSI+ F N+ FY ++ S+ E+ + G +
Sbjct: 158 GGRLHLLDVQRRMHPSIAEFSNINFYEGRL------HSEVGERAKIPGLYWPASGVQVCL 211
Query: 710 --INIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
I+ + G E + S N E AVI + KA V + IG+V PY+ Q
Sbjct: 212 VNIDALSGGETRVGTSFSNRAEAKAVIDAMVVAVKAGV---EPGDIGIVVPYSGQKTQKE 268
Query: 768 KKIGFEYE--NKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALT 825
+ + +Y + + + ++D QG E ++I+ S VR N G IGF P+R+NV LT
Sbjct: 269 RMLESDYRLPRESVERISINTVDACQGSERELILFSAVRSNRDGDIGFTGDPRRMNVVLT 328
Query: 826 RARHCLWILGSERTLIS-SESIWGALVCDAKARQCFFNADE 865
RA+ L + G +TL + +E W V AK+ C E
Sbjct: 329 RAKRSLVVFGDVKTLSADTEGDWARWVHWAKSTGCMVEMAE 369
>gi|195356067|ref|XP_002044503.1| GM13241 [Drosophila sechellia]
gi|194131805|gb|EDW53739.1| GM13241 [Drosophila sechellia]
Length = 1180
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 145/271 (53%), Gaps = 10/271 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 614 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 672
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + + + + F+ +
Sbjct: 673 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFL-VT 731
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E + V KI + KA + +Q IG+++PY Q + + +
Sbjct: 732 QGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQ---IGIITPYEGQRAYLVQYMQ 788
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ ++ +++ S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA+
Sbjct: 789 YQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKF 848
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCF 860
+ I+G+ + L + + +W L+ K R+
Sbjct: 849 GIIIVGNPKVL-AKQQLWNHLLNFYKDRKVL 878
Score = 52.0 bits (123), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
+G + F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 437 RGPQPKLFSAPHLPDLNRSQVYAVKHALQR-------PLSLIQGPPGTGKTVTSATIVYQ 489
Query: 302 LLRIKCRT-LACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L+++ T L C P+N A+ +L ++ LK+V+ K ++P+
Sbjct: 490 LVKLHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPV 537
>gi|193614406|ref|XP_001947281.1| PREDICTED: regulator of nonsense transcripts 1-like [Acyrthosiphon
pisum]
Length = 1118
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 152/307 (49%), Gaps = 28/307 (9%)
Query: 581 YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEA 640
+K HS+ +IDE+ Q E E +P+ + G+ +L+GD CQL +V K + A
Sbjct: 620 FKFHSI--------LIDESVQATEPECMVPV-VHGVQQLILVGDHCQLGPVVTCKKAANA 670
Query: 641 GFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGA---NVKSKSYEKQ 697
G +SLFERL L L +QYRMHP +S F + FY + +G + K + E
Sbjct: 671 GLTQSLFERLVVLGIRPFRLEVQYRMHPELSRFSSNFFYEGSLQNGVCADDRKLRKIEFP 730
Query: 698 YLTGTE----FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSI 753
+ E + T I G ++ N E + V I + + V Q I
Sbjct: 731 WPVADEPMLFYATLGHEEIAGSGTSYL-----NRTEAANVEHIATRFLRCGVRPDQ---I 782
Query: 754 GVVSPYTAQVVAIRKKIGFEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSI 811
G+++PY Q + + + ++ +++ S+D FQG E+D II+S VR N I
Sbjct: 783 GIITPYEGQRAYLVQYMQYQAPLPAKLYQKIEIASVDAFQGREKDFIIMSCVRSNENQGI 842
Query: 812 GFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAK 871
GF++ P+R+NVALTRA++ L I+G+ + L S + +W L+ KA+ NL
Sbjct: 843 GFLNDPRRLNVALTRAKYGLLIVGNPKVL-SKKQLWNHLLNYYKAKNVLVEG-PLNNLKP 900
Query: 872 ARLEVSK 878
+ +++ K
Sbjct: 901 SPIQLPK 907
Score = 49.7 bits (117), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPT 315
LN SQV A+ ++R + LI GPPGTGKT T + ++ L+ I L C P+
Sbjct: 463 LNRSQVKAVKHAVQR-------PLSLIQGPPGTGKTVTSATIVYQLVTINGGPVLVCAPS 515
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N+A+ +L ++ LK+V+ K ++P+
Sbjct: 516 NIAVDQLTEKIHRTGLKVVRLCSKSRESIDSPV 548
>gi|195553850|ref|XP_002076779.1| GD24645 [Drosophila simulans]
gi|194202769|gb|EDX16345.1| GD24645 [Drosophila simulans]
Length = 1180
Score = 138 bits (347), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 145/271 (53%), Gaps = 10/271 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 614 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 672
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + + + + F+ +
Sbjct: 673 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFL-VT 731
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E + V KI + KA + +Q IG+++PY Q + + +
Sbjct: 732 QGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQ---IGIITPYEGQRAYLVQYMQ 788
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ ++ +++ S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA+
Sbjct: 789 YQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKF 848
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCF 860
+ I+G+ + L + + +W L+ K R+
Sbjct: 849 GIIIVGNPKVL-AKQQLWNHLLNFYKDRKVL 878
Score = 52.0 bits (123), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
+G + F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 437 RGPQPKLFSAPHLPDLNRSQVYAVKHALQRP-------LSLIQGPPGTGKTVTSATIVYQ 489
Query: 302 LLRIKCRT-LACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L+++ T L C P+N A+ +L ++ LK+V+ K ++P+
Sbjct: 490 LVKLHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPV 537
>gi|383416785|gb|AFH31606.1| putative helicase senataxin [Macaca mulatta]
Length = 2680
Score = 138 bits (347), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 151/282 (53%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 2177 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2235
Query: 650 LTSL--NHSKH---------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L + +H L +QYRMHP I LFP+ Y N+K+ +
Sbjct: 2236 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYIY------NRNLKTNRQTETI 2289
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
++ F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 2290 RCSSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGII 2348
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG-GSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR N+G GSIGF++
Sbjct: 2349 THYKAQKTMIQKDLDKEFDRKG--PAEVDTVDAFQGRQKDCVIVTCVRANSGQGSIGFLA 2406
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 2407 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 2447
Score = 47.0 bits (110), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1963 LIHGPPGTGKSKTIVGLLYCLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2022
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K P+ GDI L
Sbjct: 2023 IILEFKEKCK---DKKNPLGNCGDINL 2046
>gi|71003407|ref|XP_756384.1| hypothetical protein UM00237.1 [Ustilago maydis 521]
gi|46095821|gb|EAK81054.1| hypothetical protein UM00237.1 [Ustilago maydis 521]
Length = 1088
Score = 138 bits (347), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 133/276 (48%), Gaps = 25/276 (9%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DEA Q E E IPL V +GD QL ++ +K AG +SLFERL L
Sbjct: 642 VLVDEATQAAEPECMIPL-------VVFVGDHLQLGPVIMNKKVARAGASQSLFERLIML 694
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-------SYEKQYLTGTEFGT 706
+ L +QYRMHP +S FP+ FY + +G + + L F
Sbjct: 695 GNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKDVDFPWPVPSLPMLFFQN 754
Query: 707 YSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
I F+ N E + V KI+ + +KA V Q IG+V+PY Q I
Sbjct: 755 LGQEEISSSGTSFL-----NRTEAANVEKIVTRFFKAGVKPSQ---IGIVTPYEGQRSYI 806
Query: 767 RKKIGFEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
+ K V+V S+D FQG E+D II+S VR N IGF+S P+R+NVAL
Sbjct: 807 VNHMQLHGSLKKELYKDVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSDPRRLNVAL 866
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
TRAR L ILG+ + L + +W L+ K + C
Sbjct: 867 TRARFGLVILGNPKVL-NKHPLWHYLLVHYKEKGCL 901
Score = 50.4 bits (119), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACTPT 315
LN SQV A+ + L++ + LI GPPGTGKT T + ++ L ++ L C P+
Sbjct: 480 LNHSQVNAVKSVLQK-------PLSLIQGPPGTGKTVTSATIVYQLSKMNPGPVLVCAPS 532
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
NVA+ +L ++ LK+V+ + K + PI
Sbjct: 533 NVAVDQLTEKIHLTGLKVVRLTAKSREALDGPI 565
>gi|336379199|gb|EGO20355.1| hypothetical protein SERLADRAFT_477852 [Serpula lacrymans var.
lacrymans S7.9]
Length = 376
Score = 138 bits (347), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 155/290 (53%), Gaps = 33/290 (11%)
Query: 577 ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKI 636
AS+S L+ V+ P+ FL DEA+ E S IPL + G H LIGD QLP ++ S+
Sbjct: 22 ASASVALNVVDF-PVVFL--DEASMSTEPASLIPL-MKGSQHVALIGDHKQLPPIITSRE 77
Query: 637 SDEAGFGRSLFERLTSLNHSKH-LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYE 695
+ G G SLFERL +L+IQYRMHP+IS FP+L+FY + +G S +
Sbjct: 78 AKLKGLGISLFERLAEEGVVPSIMLDIQYRMHPTISHFPSLEFYNFSLQNGTVDASGNTT 137
Query: 696 KQYLTGTEFGTYSFINI-IGGREDFIY------HSCR-----NIVEVSAVIKILQKLYKA 743
L ++ +N+ G R ++ S R N E + V +++ L
Sbjct: 138 PSLLP--PLSSHLEVNLETGNRPSVVFLDHTGSESARDRSRVNWNEANIVCSVVEDLLLQ 195
Query: 744 WVGSKQKVSIGVVSPYTAQVVAIRK------KIGFEYENKDG-------FTVKVKSIDGF 790
K K IG+++PY AQ+ + + K ++N G +++K++DGF
Sbjct: 196 NEHLKGK-DIGIIAPYAAQISLLTRLLNTNAKYHTRFKNALGDHRVMQLSNIEIKTVDGF 254
Query: 791 QGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTL 840
+G E+++II STVR NT G IGF++ +R+NV LTRA+ L+++GS TL
Sbjct: 255 EGREKEVIIFSTVRNNTSGYIGFLADRRRLNVGLTRAKRGLFVVGSISTL 304
>gi|380810832|gb|AFE77291.1| putative helicase senataxin [Macaca mulatta]
Length = 2680
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 151/282 (53%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 2177 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2235
Query: 650 LTSL--NHSKH---------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L + +H L +QYRMHP I LFP+ Y N+K+ +
Sbjct: 2236 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYIY------NRNLKTNRQTETI 2289
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
++ F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 2290 RCSSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGII 2348
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG-GSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR N+G GSIGF++
Sbjct: 2349 THYKAQKTMIQKDLDKEFDRKG--PAEVDTVDAFQGRQKDCVIVTCVRANSGQGSIGFLA 2406
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 2407 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 2447
Score = 47.0 bits (110), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1963 LIHGPPGTGKSKTIVGLLYCLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2022
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K P+ GDI L
Sbjct: 2023 IILEFKEKCK---DKKNPLGNCGDINL 2046
>gi|406606341|emb|CCH42332.1| Regulator of nonsense transcripts 1 [Wickerhamomyces ciferrii]
Length = 1077
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 168/334 (50%), Gaps = 55/334 (16%)
Query: 570 ASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLP 629
A + +T ++ H + + L++DE+ Q E+ + +PL L G+ +L+GDE QL
Sbjct: 748 AKVILTTTITAGGPHLRHLDKIPILIMDESTQSNEASTLVPLSLKGLEKILLVGDEKQL- 806
Query: 630 AMVESKISDEAGFGRSLFERL--TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGA 687
S +D +SLFER+ + ++L IQYRM+P IS FPN++FY N+++DG
Sbjct: 807 ----SSFNDIPYLEQSLFERVLKNGTYFNPNMLQIQYRMNPKISKFPNIKFYENKLIDGV 862
Query: 688 NVKSKS-YEKQYLTGTEFG-----TYSFINIIGGREDFIYHSC-----RNIVEVSAVIKI 736
+ ++ + L ++G T S N I F+ +S +NI E + ++K+
Sbjct: 863 TEQDRTTFGIPPLLFIDYGDHYKETQSLKNPIK----FLINSGNISSYQNIGEANLILKL 918
Query: 737 LQKL-YKAWVGSKQKVSIGVVSPYT------AQVVAIRKKIG-------------FEYEN 776
+ +L +K + K IG+++PY+ AQ++ +KI F + N
Sbjct: 919 IYELNHKGGINLK---DIGIITPYSSQRDIIAQLIRNDRKINPNFEKIQEEIDDDFNHSN 975
Query: 777 KDGFT----------VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTR 826
F + + SID FQG E++ II S VR N IGF+ +R+NVALTR
Sbjct: 976 NSQFKKPSSIKTICGLMISSIDAFQGREKNHIIFSCVRSNEFNKIGFVKDLRRLNVALTR 1035
Query: 827 ARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
A++ L I+G++ + +S+W L+ + C
Sbjct: 1036 AKNSLTIVGNKSCMKQGDSVWNDLINHLETNHCI 1069
Score = 47.0 bits (110), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 11/77 (14%)
Query: 280 VELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELAS-----------RVLK 328
+ ++ GPPGTGKT T++ L+L L++ L +NVAI +A R+L
Sbjct: 622 ITILQGPPGTGKTSTINELILQLVKDTYPILVVAASNVAIDNIAEKLMKNKDLEILRILS 681
Query: 329 LVKESYKRDSRSNTPIC 345
KES + PIC
Sbjct: 682 TAKESEYNERHHLNPIC 698
>gi|401881567|gb|EJT45865.1| hypothetical protein A1Q1_05671 [Trichosporon asahii var. asahii
CBS 2479]
Length = 1018
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 141/281 (50%), Gaps = 33/281 (11%)
Query: 586 VEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRS 645
+E+ F+ +DEA+ E S +PL G +IGD QLP ++ S+ + + G G S
Sbjct: 704 LEVIDFPFVFLDEASMATEPLSIVPL-TKGSAQVAIIGDHKQLPPVIVSEAAQQGGLGTS 762
Query: 646 LFERLTSLNHSKH-LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF 704
LFERL +L+ QYRMHPSI+ F + FY Q+ DG V + + T F
Sbjct: 763 LFERLIHEQAVPSIMLDTQYRMHPSIAAFSSEAFYNGQLRDGTVVDGQVDPVLHPPTTAF 822
Query: 705 --------GTYSFINIIGGREDFIY----HSCRNIVEVSAVIKILQKLYKAWVGSKQKVS 752
+ +F+N DF S N E V I+ L + K
Sbjct: 823 LLPDGDSSKSLTFLN-----HDFPESPQNRSIANHHEAGRVCDIVADLLASNPDLK-GAD 876
Query: 753 IGVVSPYTAQVVAIRKKIGFEYENKDGF-------------TVKVKSIDGFQGGEEDIII 799
IGV++PY+AQ+ I + + + + F ++++++DGF+G E+ +II
Sbjct: 877 IGVIAPYSAQIRLITEFLTIDERRQRAFRQWLGPERAREIEDIEIRTVDGFEGREKSVII 936
Query: 800 ISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTL 840
STVR NTGG +GF+ +R+NV LTRA+ L +LGS RTL
Sbjct: 937 FSTVRSNTGGFLGFLGDWRRLNVGLTRAKRALIMLGSLRTL 977
>gi|406696583|gb|EKC99865.1| hypothetical protein A1Q2_05830 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1018
Score = 137 bits (346), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 141/281 (50%), Gaps = 33/281 (11%)
Query: 586 VEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRS 645
+E+ F+ +DEA+ E S +PL G +IGD QLP ++ S+ + + G G S
Sbjct: 704 LEVIDFPFVFLDEASMATEPLSIVPL-TKGSAQVAIIGDHKQLPPVIVSEAAQQGGLGTS 762
Query: 646 LFERLTSLNHSKH-LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF 704
LFERL +L+ QYRMHPSI+ F + FY Q+ DG V + + T F
Sbjct: 763 LFERLIHEQAVPSIMLDTQYRMHPSIAAFSSEAFYNGQLKDGTVVDGQVDPVLHPPTTAF 822
Query: 705 --------GTYSFINIIGGREDFIY----HSCRNIVEVSAVIKILQKLYKAWVGSKQKVS 752
+ +F+N DF S N E V I+ L + K
Sbjct: 823 LLPDGDSSKSLTFLN-----HDFPESPQNRSIANHHEAGRVCDIVADLLASNPDLK-GAD 876
Query: 753 IGVVSPYTAQVVAIRKKIGFEYENKDGF-------------TVKVKSIDGFQGGEEDIII 799
IGV++PY+AQ+ I + + + + F ++++++DGF+G E+ +II
Sbjct: 877 IGVIAPYSAQIRLITEFLTIDERRQRAFRQWLGPERAREIEDIEIRTVDGFEGREKSVII 936
Query: 800 ISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTL 840
STVR NTGG +GF+ +R+NV LTRA+ L +LGS RTL
Sbjct: 937 FSTVRSNTGGFLGFLGDWRRLNVGLTRAKRALIMLGSLRTL 977
>gi|405124191|gb|AFR98953.1| helicase sen1 [Cryptococcus neoformans var. grubii H99]
Length = 2142
Score = 137 bits (346), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 171/352 (48%), Gaps = 42/352 (11%)
Query: 520 AFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASS 579
A + +R QL Q S+ R+ LD ++ D K A + +T S
Sbjct: 1663 ALITRRT--QLGQASSKAKDAARDATRHLD-------GARRAARDQILKDADIICATLSG 1713
Query: 580 ----SYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESK 635
+ H+ E ++IDEAAQ E IPL+ G +++GD QLP S
Sbjct: 1714 AGHDTLAAHTFET-----VIIDEAAQAIEMSCLIPLKY-GCKRCIMVGDPNQLPPTTFSM 1767
Query: 636 ISDEAGFGRSLFERLTSLNHSK-HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSY 694
+++ + +SLF R+ + S LL+IQYRMHP IS P+ FY Q+ DG ++ K+
Sbjct: 1768 SAEKLQYNKSLFVRMAKRDVSHVQLLSIQYRMHPFISELPSKVFYHGQLKDGPSMAKKTA 1827
Query: 695 EKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS-- 752
+ FG Y F NI G E S +N E A +++ ++L A G++ ++
Sbjct: 1828 AIWHQRNI-FGPYRFFNI-EGTEMKTGTSTKNPAEALAAVELYRRL-SADFGTRVNLAMR 1884
Query: 753 IGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIG 812
IGV+S Y Q+ +++K + + V+ ++DGFQG E+DIII+S
Sbjct: 1885 IGVISMYREQLWELKRKFTEAFGSTILELVEFNTVDGFQGQEKDIIILS----------- 1933
Query: 813 FISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNAD 864
R+NVALTRA+ L+I G+ TL S+ W +V DA+ R F N D
Sbjct: 1934 ------RMNVALTRAKSSLFIFGNGSTLERSDERWKIIVQDARDRGFFINYD 1979
Score = 51.2 bits (121), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 19/85 (22%)
Query: 256 TLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLL---LTLLRI------- 305
+LNE Q A+L L G LI GPPGTGKTKT+S L+ ++ RI
Sbjct: 1492 SLNEPQAKAVLGAL------EVKGFALIQGPPGTGKTKTISGLVGKWMSERRIPISVDGQ 1545
Query: 306 ---KCRTLACTPTNVAITELASRVL 327
K + L C P+N AI E+ R++
Sbjct: 1546 PPVKPKLLVCAPSNAAIDEVCKRLI 1570
>gi|73967706|ref|XP_537811.2| PREDICTED: probable helicase senataxin isoform 1 [Canis lupus
familiaris]
Length = 2693
Score = 137 bits (346), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 148/280 (52%), Gaps = 21/280 (7%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 2190 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2248
Query: 650 LTSL--NHSKH---------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L ++ +H L +QYRMHP I LFP+ Y + ++ +
Sbjct: 2249 FYKLLEDNVEHNMIGRLPVLQLTVQYRMHPDICLFPSNYVYNRSLKTNRQTETNRCSSDW 2308
Query: 699 LTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSP 758
F Y ++ G E S N+ E+ V++I+ KL K +IG+++
Sbjct: 2309 ----PFQPYLVFDVGDGSERRDNDSYVNVQEIKLVMEII-KLIKDKRRDVTFRNIGIITH 2363
Query: 759 YTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFISKP 817
Y AQ I+K + E++ K +V ++DGFQG ++D +I++ VR N GSIGF++
Sbjct: 2364 YKAQKTMIQKDLDKEFDRKG--PAEVDTVDGFQGRQKDCVIVTCVRANAMQGSIGFLASL 2421
Query: 818 QRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 2422 QRLNVTITRAKYSLFILGHLRTLMENQH-WNHLIQDAQKR 2460
Score = 47.0 bits (110), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1976 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2035
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K P+ GDI L
Sbjct: 2036 IILEFKEKCK---DKKNPLGNCGDINL 2059
>gi|167533295|ref|XP_001748327.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773139|gb|EDQ86782.1| predicted protein [Monosiga brevicollis MX1]
Length = 879
Score = 137 bits (346), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 143/270 (52%), Gaps = 30/270 (11%)
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS 652
+ +IDEAAQ E+E+ + LQ G + +L+GD QLPA + S + +GRS+FERL
Sbjct: 459 YTIIDEAAQCAETEALVALQRCG-SKTILVGDHRQLPATLLSPLGSRV-YGRSMFERLYP 516
Query: 653 LNHSKH---LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSF 709
L H+ +L++QYRMHP I + FY ++ V ++ L GT+ + +
Sbjct: 517 LLHAIQAAVMLDVQYRMHPKICAIASNLFYEGRLETDPTVATRRSRDPILRGTKESPFLW 576
Query: 710 INII------------GGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVS 757
+ GG +I N+ E VI+ L L + +G + +V+I V+
Sbjct: 577 YDTPPETEAAMTRGGQGGPNSYI-----NVREAEQVIQCLLTLCRIRLGLRNRVTI--VT 629
Query: 758 PYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKP 817
PY AQ I + + + K V+V ++D QG E D+II S VR + ++GF S
Sbjct: 630 PYAAQRNCISDHLTWAF-GKAANAVRVSTVDAMQGQESDVIIYSAVRTS---ALGFTSDR 685
Query: 818 QRVNVALTRARHCLWILGSERTLISSESIW 847
+R+NVALTRA+ CL +LGS+ L+ ++ W
Sbjct: 686 RRINVALTRAKTCLIVLGSK--LLLTDPTW 713
>gi|194225958|ref|XP_001498724.2| PREDICTED: probable helicase senataxin [Equus caballus]
Length = 2680
Score = 137 bits (346), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 177/360 (49%), Gaps = 47/360 (13%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + + G+ +S+ R
Sbjct: 2182 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQDYGYDQSMMAR 2240
Query: 650 LTSL--NHSKH---------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L + +H L +QYRMHP I LFP+ Y +KS +
Sbjct: 2241 FYKLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVY-----------NKSLKTNR 2289
Query: 699 LTGTE-------FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKV 751
LT T F Y ++ G E S N+ E+ V++I+ KL K
Sbjct: 2290 LTETSRCSSDWPFQPYLVFDVGDGSERRDNDSYVNVQEIKLVMEII-KLIKDKRRDVTFR 2348
Query: 752 SIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCN-TGGS 810
+IG+++ Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR N T GS
Sbjct: 2349 NIGIITHYKAQKTMIQKDLDKEFDGKG--PAEVDTVDAFQGRQKDCVIVTCVRANATQGS 2406
Query: 811 IGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLA 870
IGF++ QR+NV +TRA++ L+ILG RTL+ +E W L+ DA+ R ++N
Sbjct: 2407 IGFLASLQRLNVTITRAKYSLFILGHLRTLMDNEH-WNELIQDAQKRGAIIKTC-DKNYK 2464
Query: 871 KARLEVSKELVEIGAESLTSTS---------QGG-KKEEFEFEFVKAFRSINLIHKVLNS 920
+++ K L + SLT S QGG + + EF K + +L H +S
Sbjct: 2465 HDAMKILK-LKPVLQRSLTHPSAVAPEVSRPQGGLPSNKLDSEFAKTSFASSLYHTPSDS 2523
Score = 47.4 bits (111), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1968 LIHGPPGTGKSKTIVGLLYRLLTENHRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2027
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K P+ GDI L
Sbjct: 2028 IILEFKEKCK---DKKNPLGNCGDINL 2051
>gi|296191064|ref|XP_002743464.1| PREDICTED: probable helicase senataxin [Callithrix jacchus]
Length = 2678
Score = 137 bits (345), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 149/282 (52%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 2175 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2233
Query: 650 LTSL-------NHSKHL----LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L N L L IQYRMHP I LFP+ Y N+K+ +
Sbjct: 2234 FCKLLEENVEYNMISRLPILRLTIQYRMHPDICLFPSNYIY------NRNLKTNRQTETV 2287
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
++ F Y ++ G E S N+ E+ VI+++ KL K +IG++
Sbjct: 2288 RCSSDWPFQPYLVFDVGDGSERRDNDSYVNVQEIKLVIELI-KLIKDKRKDVSFRNIGII 2346
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR NT GSIGF++
Sbjct: 2347 THYKAQKTMIQKDLDKEFDRKG--PAEVDTVDAFQGRQKDCVIVTCVRANTMQGSIGFLA 2404
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 2405 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 2445
Score = 46.6 bits (109), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1961 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2020
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K P+ GDI L
Sbjct: 2021 IILEFKEKCK---DKKNPLGNCGDINL 2044
>gi|145350386|ref|XP_001419588.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579820|gb|ABO97881.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 797
Score = 137 bits (345), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 136/267 (50%), Gaps = 38/267 (14%)
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS 652
++IDE+ Q E E IP+ + G V++GD QL +V K + AG +SLFERL +
Sbjct: 518 MVLIDESTQATEPECLIPI-VMGAKQVVMVGDHKQLGPVVTCKQAYAAGLAQSLFERLIA 576
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN--------------VKSKSYEKQY 698
L L IQYRMHP +S FP+ FY + +G + V SK
Sbjct: 577 LGIQPIRLQIQYRMHPCLSEFPSNTFYDGTLQNGVSAIERTLSHIDFPWPVPSKPMMFWS 636
Query: 699 LTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSP 758
TG E + S + + N E SAV K + L A V +Q IGVV+P
Sbjct: 637 QTGQEEMSASGTSFL------------NRAEASAVEKCVTHLLNAGVSPEQ---IGVVTP 681
Query: 759 YTAQ---VVAIRKKIGFEYEN--KDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGF 813
Y Q VV ++G + KD ++V S+D FQG E+D II++ VR N IGF
Sbjct: 682 YEGQRAYVVQHMTRVGVLHPQLYKD---IQVASVDSFQGKEKDFIIMTCVRSNEKSGIGF 738
Query: 814 ISKPQRVNVALTRARHCLWILGSERTL 840
+S P+R+NVA+TRAR L ++G+ + L
Sbjct: 739 LSDPRRLNVAITRARSGLIVIGNPKVL 765
Score = 49.7 bits (117), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 243 GQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTL 302
G + +K LN+SQ A+ L+R + L+ GPPGTGKT T + L+ L
Sbjct: 341 GDFPKKLTAPGLPELNQSQHDAVKTVLQR-------PLSLVQGPPGTGKTVTSATLVYHL 393
Query: 303 L-RIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRS 340
R + + C P+NVA+ LA ++ K + + SRS
Sbjct: 394 AKRGNGQVIVCAPSNVAVDHLAEKIEKTGLKVVRISSRS 432
>gi|440904008|gb|ELR54581.1| Regulator of nonsense transcripts 1 [Bos grunniens mutus]
Length = 1156
Score = 137 bits (345), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 126/240 (52%), Gaps = 8/240 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 668 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 726
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + + F +
Sbjct: 727 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 786
Query: 714 GGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ N E + V KI KL KA Q IG+++PY Q + + +
Sbjct: 787 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQ---IGIITPYEGQRSYLVQYMQ 843
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR+
Sbjct: 844 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 903
Score = 49.7 bits (117), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 491 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQRP-------LSLIQGPPGTGKTVTSATIVYH 543
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 544 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 591
>gi|317504722|ref|ZP_07962683.1| DNA helicase [Prevotella salivae DSM 15606]
gi|315664160|gb|EFV03866.1| DNA helicase [Prevotella salivae DSM 15606]
Length = 649
Score = 137 bits (345), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 170/370 (45%), Gaps = 55/370 (14%)
Query: 498 DNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTT 557
D ++ E+ F D WA + L+ H++R + + L T
Sbjct: 288 DKMLGFTYERRFESHPDYPQLWAIRKAIRELRSHRKRGD-----ERFHQKFEHLKARATE 342
Query: 558 SKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGIN 617
++ + F A + ST S +E L IDEAAQ E+ IP++ +
Sbjct: 343 LEIRINSNLFDEARVVASTLVGSAN-RVLEGMKFGTLFIDEAAQALEAACWIPMRR--VT 399
Query: 618 HAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKH---LLNIQYRMHPSISLFP 674
VL GD CQLP MV+S + +AG G+SL ER+ + H LL IQYRM+ I F
Sbjct: 400 RVVLAGDHCQLPPMVKSIAALKAGLGKSLMERI--VEHKPDVVTLLKIQYRMNEKIMKFS 457
Query: 675 NLQFYRNQILDGANVK---------------SKSYEKQYLTGTEFGTYSFINIIGGREDF 719
+ FY ++ + SK +++ +G F SF I
Sbjct: 458 SDWFYHGEVESAPQTRNRGILDLDEPIEWRDSKVDDEEGDSGESFVGESFGRI------- 510
Query: 720 IYHSCRNIVEVSAVIKILQKLYKAWVGSK----QKVSIGVVSPYTAQVVAIRKKIGFEYE 775
N E + L+ +K +G + + + +GV+SPY AQV +R+ I
Sbjct: 511 ------NKAEAQLTLDTLEDYFKK-IGKQRILDEHIDVGVISPYRAQVQYLRRLI----R 559
Query: 776 NKDGF-----TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
++ F ++ V ++DGFQG E DII+IS VR N G IGF++ +R+NVA+TRAR
Sbjct: 560 KRESFKPYRHSISVNTVDGFQGQERDIILISLVRSNDQGQIGFLNDLRRMNVAITRARMK 619
Query: 831 LWILGSERTL 840
L ILG + TL
Sbjct: 620 LIILGDKATL 629
>gi|403289669|ref|XP_003935968.1| PREDICTED: probable helicase senataxin [Saimiri boliviensis
boliviensis]
Length = 2677
Score = 137 bits (345), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 150/282 (53%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 2175 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2233
Query: 650 LTSL--NHSKH---------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L + +H L IQYRMHP I LFP+ Y N+K+ +
Sbjct: 2234 FCKLLEENVEHNMISRLPILRLTIQYRMHPDICLFPSNYVY------NRNLKTNRQTETI 2287
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
++ F Y ++ G E S N+ E+ VI+++ KL K +IG++
Sbjct: 2288 RCSSDWPFQPYLVFDVGDGSERRDNDSYVNVQEIKLVIELI-KLIKDKRKDVTFRNIGII 2346
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR NT GSIGF++
Sbjct: 2347 THYKAQKTMIQKDLDKEFDRKG--PAEVDTVDAFQGRQKDCVIVTCVRANTMQGSIGFLA 2404
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 2405 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 2445
Score = 46.6 bits (109), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1961 LIHGPPGTGKSKTIVGLLYRLLTENQRKGYSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2020
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K P+ GDI L
Sbjct: 2021 IILEFKEKCK---DKKNPLGNCGDINL 2044
>gi|67474564|ref|XP_653031.1| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|56469949|gb|EAL47645.1| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 915
Score = 137 bits (345), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/266 (36%), Positives = 151/266 (56%), Gaps = 29/266 (10%)
Query: 595 VIDEAAQLKESESTIPLQLAGI---NHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT 651
++DEAAQ E E+ LAGI AVLIGD QL S + EAGF +S+FER
Sbjct: 592 IVDEAAQSLEPET-----LAGIINVRKAVLIGDIQQLQPTCLSTEAREAGFQKSMFERFM 646
Query: 652 SLNHSKH-LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYS-- 708
+ K +L QYRMHP+IS F N FY +++ +G + K + ++ + + F Y+
Sbjct: 647 ANTQIKRTMLKTQYRMHPAISEFSNKMFYSSKLENGVSSKDR-FDNRIINF--FPDYTNP 703
Query: 709 --FINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS-IGVVSPYTAQVVA 765
FIN G + Y S + ++I+Q++ + ++ +K K + IG++SPY AQ
Sbjct: 704 IMFINCDGTEQ---YGSSGTSYNNAGEVQIIQEVVEKFLKNKIKENEIGIISPYQAQQEL 760
Query: 766 IRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALT 825
I + + + +KV +IDGFQG E++ II S VR N +GF++ +R+NVALT
Sbjct: 761 ISQYVSTK--------IKVANIDGFQGNEKEYIIFSCVRSNQTLGVGFVNDYKRLNVALT 812
Query: 826 RARHCLWILGSERTLISSESIWGALV 851
RA+ L I+G+ TL++S+ +W L+
Sbjct: 813 RAKRGLIIIGNIPTLVTSK-VWNMLI 837
>gi|395506275|ref|XP_003757460.1| PREDICTED: probable helicase senataxin [Sarcophilus harrisii]
Length = 2753
Score = 137 bits (345), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 153/286 (53%), Gaps = 33/286 (11%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ P + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 2238 PFSCVIVDEAGQSCEIETLTPF-IHRCNKLILVGDPKQLPPTVISVKAQEYGYDQSMMAR 2296
Query: 650 LTSLNHSKHL----------------LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKS 693
L KHL L +QYRMHP I LFP+ Y N+ L + +
Sbjct: 2297 LY-----KHLEEQVKQNVISRSPVLQLTVQYRMHPDICLFPSSYIY-NRTLKTNRL---T 2347
Query: 694 YEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSI 753
E + + F Y ++ G E + S NI E+ V++I+ KL K +I
Sbjct: 2348 EESRCTSDWPFQPYLVFDVGDGSERREHDSYVNIQEIKLVMEII-KLIKDRRKDITIRNI 2406
Query: 754 GVVSPYTAQVVAIRKKIGFEYE-NKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG-GSI 811
G+++ Y AQ + I++++ E+E + G +V ++D FQG ++D II++ VR N GSI
Sbjct: 2407 GIITHYKAQKMMIQQELDKEFEKTRPG---EVDTVDAFQGRQKDCIIVTCVRANASQGSI 2463
Query: 812 GFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
GF++ QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 2464 GFLASLQRMNVTITRAKYSLFILGHLRTLMENQH-WNHLIQDAQKR 2508
Score = 44.3 bits (103), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKC----------------RTLACTPTNVAITELASR 325
LI GPPGTGK++T+ LL +L K R L C P+N A+ EL +
Sbjct: 2022 LIHGPPGTGKSRTIVGLLYRILTEKPKKGDSDENLNAKFKRNRVLVCAPSNAAVDELMKK 2081
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K + N P+ GDI L
Sbjct: 2082 IILEFKE--KCQDKKN-PLGNCGDINL 2105
>gi|302766237|ref|XP_002966539.1| hypothetical protein SELMODRAFT_407541 [Selaginella moellendorffii]
gi|300165959|gb|EFJ32566.1| hypothetical protein SELMODRAFT_407541 [Selaginella moellendorffii]
Length = 1030
Score = 137 bits (345), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 142/270 (52%), Gaps = 28/270 (10%)
Query: 591 LNFLVIDEAAQLKESESTIPLQL--AGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
+ ++IDEAAQ E + IPLQL A +LI D QLPA V S + F S+FE
Sbjct: 551 FDAVIIDEAAQAVEPSTLIPLQLLKATRGKCILIRDPKQLPATVLSVPASRLLFDCSMFE 610
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANV----KSKSYEKQYLTGTEF 704
+L QYRMHP I FP+ +Y Q+ DG+ V +S + ++ TG
Sbjct: 611 SFPV-----SMLTTQYRMHPEIRSFPSTHYYDGQLKDGSTVLHGNRSAPFHRESHTG--- 662
Query: 705 GTYSFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQV 763
F +I G+E S N E + ++L+ L + ++ + IGV++PY Q
Sbjct: 663 ----FFDIRDGQERPGSMQSLTNPDEAEFIFQLLRVLKERYLEEVRPGRIGVITPYQEQR 718
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGS---IGFISKPQRV 820
+++ + + D V ++D FQG E DII++STVR + G S +GF++ +R+
Sbjct: 719 KVLQENMRSLHSGID-----VNTVDSFQGREADIIVLSTVRASFGDSQAGVGFLADVRRM 773
Query: 821 NVALTRARHCLWILGSERTLISSESIWGAL 850
NVALTRA+ LW++G+ RTL + W AL
Sbjct: 774 NVALTRAKFSLWVVGNARTLERNPD-WKAL 802
>gi|440292088|gb|ELP85330.1| hypothetical protein EIN_085720 [Entamoeba invadens IP1]
Length = 1109
Score = 137 bits (344), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/271 (35%), Positives = 143/271 (52%), Gaps = 26/271 (9%)
Query: 597 DEAAQLKESESTIPLQLAGINHA---VLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
DEA+Q E E+ L IN VLIGD QLP V + + + G S+FERL
Sbjct: 578 DEASQALEPET-----LKAINEVKKVVLIGDFNQLPPTVVTTKAKQGGLDLSMFERLIQN 632
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK-QYLTGTEFGTYSFINI 712
LLN+QYRMHP+IS FP+ FY+ + DG + +S + + E FI+
Sbjct: 633 KVFTTLLNVQYRMHPAISSFPSKNFYKGNLHDGVTEQQRSDPRLDHFFPVEHWPVVFIHH 692
Query: 713 IG----GREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
G G Y++ + V+AVI L+ + + Q +G++S Y +Q+ I +
Sbjct: 693 EGKESVGENGASYYNVNEVGIVTAVIGELKN--RGF----QDRELGIISTYNSQIQLISE 746
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
I K G ++ S+D FQG E++II++S VR N IGF+S +R+NVALTRAR
Sbjct: 747 NI-----EKQG-NIQTSSVDSFQGSEKEIIVLSCVRSNERLGIGFVSDHRRMNVALTRAR 800
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQC 859
L ++G+ RTL S++ W L+ +QC
Sbjct: 801 KGLVVVGNMRTL-STDQNWRKLILTYGEKQC 830
>gi|308807923|ref|XP_003081272.1| RNA helicase, putative (ISS) [Ostreococcus tauri]
gi|116059734|emb|CAL55441.1| RNA helicase, putative (ISS) [Ostreococcus tauri]
Length = 963
Score = 137 bits (344), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 148/291 (50%), Gaps = 25/291 (8%)
Query: 562 LEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVL 621
LE + A + +TA + + + ++IDE+ Q E E IP+ + G H V+
Sbjct: 565 LERDILENADVICTTAVGAGDPRLADFR-FRMVLIDESTQATEPECLIPI-VMGAKHVVM 622
Query: 622 IGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRN 681
+GD QL +V K + AG +SLFERL +L L +QYRMHP +S FP+ +FY
Sbjct: 623 VGDHRQLGPVVTCKQAHAAGLAQSLFERLIALGIKPIRLGVQYRMHPCLSDFPSNKFYEG 682
Query: 682 QILDGANVKSKSYEKQYLTGTEFG------TYSFINIIGGRE-DFIYHSCRNIVEVSAVI 734
+ +G + ++ L+ +F F + G E S N E AV
Sbjct: 683 VLSNGVSASDRT-----LSHVDFPWPVPSKPMMFWSQTGQEEMSASGTSFLNRAEAVAVE 737
Query: 735 KILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRKKIGFEYEN--KDGFTVKVKSIDG 789
K + L + V + IGVV+PY Q VV ++G + KD ++V S+D
Sbjct: 738 KCVTHLLNSGVSPE---DIGVVTPYEGQRAYVVQHMTRVGVLHPQLYKD---IQVASVDS 791
Query: 790 FQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTL 840
FQG E+D II++ VR N IGF+S P+R+NVA+TRAR L I+G+ + L
Sbjct: 792 FQGKEKDFIIMTCVRSNEKSGIGFLSDPRRLNVAITRARSGLIIIGNPKVL 842
Score = 48.5 bits (114), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL-RIKCRTLACTPT 315
LN+SQ A+ L R + L+ GPPGTGKT T + ++ L R + + C P+
Sbjct: 432 LNDSQFNAVKEVLER-------PLSLVQGPPGTGKTVTSATIVYHLAKRGNGQVIVCAPS 484
Query: 316 NVAITELASRVLKLVKESYKRDSRS 340
NVA+ LA ++ K + + SRS
Sbjct: 485 NVAVDHLAEKIEKTGLKVVRISSRS 509
>gi|392587391|gb|EIW76725.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 1113
Score = 137 bits (344), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 164/340 (48%), Gaps = 38/340 (11%)
Query: 539 SVLRNLWNSL--DELNLPCTTSKL------VLEDFCFKRASLFFSTASSSYKLHSVEIKP 590
+++ NL N+L E L KL +L D + + + SS SV P
Sbjct: 724 AIIENLRNALVVSERRLGIVRGKLHVLHNDMLRDITAQADVICTTCISSVNSALSVIDFP 783
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
+ FL DEA+ E S IPL + G H LIGD QLP ++ S +D G G SLFERL
Sbjct: 784 VVFL--DEASMSTEPASLIPL-MRGSQHVALIGDHKQLPPVIVSYEADLKGLGISLFERL 840
Query: 651 TSLNHSKH-LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSF 709
T +L++QYRMHP++S FP+L+FY + DG V S L
Sbjct: 841 TEEGVVPSIMLDVQYRMHPALSYFPSLEFYNLSLQDG-TVDSGGNVSPLLLPPLSAHLPV 899
Query: 710 INIIGGREDFIY-----------HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSP 758
G R ++ S N E + V I++ L + IG+++P
Sbjct: 900 DESTGNRPSIVFMDHAGSETLKDRSRVNYDEANIVCSIIEDLLLRNEHMRGD-DIGIIAP 958
Query: 759 YTAQVVAIRKKIGFEYENKDGFT-------------VKVKSIDGFQGGEEDIIIISTVRC 805
Y AQ+ + + + + + F V+V+++DGF+G ++D+II STVR
Sbjct: 959 YAAQISLLTRLLNTDAKYARRFAATLGDRRVRELSKVEVRTVDGFEGRQKDVIIFSTVRN 1018
Query: 806 NTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSES 845
N G +GF++ +R+NV LTRA+ L+++GS TL S+S
Sbjct: 1019 NPAGHVGFLADRRRLNVGLTRAKRGLFVVGSISTLKQSKS 1058
>gi|340053654|emb|CCC47947.1| putative nonsense mRNA reducing factor 1 [Trypanosoma vivax Y486]
Length = 861
Score = 137 bits (344), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 161/336 (47%), Gaps = 22/336 (6%)
Query: 531 HQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFST--ASSSYKLHSVEI 588
H+ L ++R+ N DE + +E+ +A + T + +L +
Sbjct: 499 HETLKRILGLIRSGENISDEDYNAYKKGTMKIEELILNKADVVCCTCIGAGDSRLREMRF 558
Query: 589 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
K +++IDEA Q E E+ IPL + G L+GD CQL +V S ++ GF RSLFE
Sbjct: 559 K---YVLIDEATQGTEPETLIPL-VRGAKQVFLVGDHCQLRPVVFSIAAERTGFRRSLFE 614
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYS 708
RL + H L++QYRMHP +SLF + FY + +G + + + +
Sbjct: 615 RLLMMGHRPLRLDVQYRMHPCLSLFISHHFYEGTLQNGVTEGQRDALQVFPWPDGTRPFF 674
Query: 709 FINIIGGREDFIYHSCR-NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
F N G E S N E + +++ KL + G IGV++PY +Q +R
Sbjct: 675 FYNSTGPEELGANGSSYLNRTEAALAEQVVTKLIRD--GGVSPDGIGVITPYRSQCRFLR 732
Query: 768 KKIGFEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRV 820
Y ++ GF V+V S+D FQG E++ II S VR N IGF +R+
Sbjct: 733 N-----YLSRCGFLPASTYDRVEVSSVDAFQGREKEFIIFSCVRSNHRQGIGFAVDGRRL 787
Query: 821 NVALTRARHCLWILGSERTLISSESIWGALVCDAKA 856
NV+LTRA+ L I+G+ + L S W L+ K+
Sbjct: 788 NVSLTRAKRGLIIMGNVQ-LFSRYPNWNELLVHMKS 822
Score = 50.8 bits (120), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Query: 255 STLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL-RIKCRTLACT 313
S LN SQ A+ L++ + LI GPPGTGKT T ++ L R+K + L C
Sbjct: 393 SNLNNSQEQAVRTALKK-------PLTLIQGPPGTGKTSTSVAIVSQLYERVKTQILVCA 445
Query: 314 PTNVAITELASRV 326
P+NVA+ LA R+
Sbjct: 446 PSNVAVDHLAERL 458
>gi|146419989|ref|XP_001485953.1| hypothetical protein PGUG_01624 [Meyerozyma guilliermondii ATCC
6260]
Length = 650
Score = 137 bits (344), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 193/404 (47%), Gaps = 54/404 (13%)
Query: 500 VVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDE-LNLPCTTS 558
+VS E EK +S D ++ + + L Q+ + + LR ++++ + L T
Sbjct: 260 IVSNEKEKEYSR--DHPLASICLHHKVYDALPQQMKQTVDDLRRPFSNVSQNLYKKLLTQ 317
Query: 559 KLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINH 618
++ L D +A + F+T + +K L +++DEA Q E + IPL + G++
Sbjct: 318 QIKLSDMFTAQAKVIFTTTVVAGGNQLKLVKKLPVVIMDEATQSSEPTTLIPLSMPGVDK 377
Query: 619 AVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHS---KHLLNIQYRMHPSISLFPN 675
V +GD+ QL S S SLFER+ LN+S H+L+ QYRMHP+IS FP
Sbjct: 378 FVFVGDQRQL-----SSFSMVPNLSLSLFERVL-LNNSYRNPHMLDTQYRMHPAISEFPR 431
Query: 676 LQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCR--------NI 727
++FY + DG ++ + E Y + RED + + R N+
Sbjct: 432 VKFYDELLKDGITADDRAMD----NIPENPVYFWDTKGKAREDRVRYGFREDRGYTYSNL 487
Query: 728 VEVSAVIKILQKL-YKAWVGSKQKVSIGVVSPYTAQVVAI-------------RKKIGFE 773
E+ V K+L KL Y V K IGV++PY Q I ++++ E
Sbjct: 488 NEIEYVTKVLMKLIYDKQVS---KSDIGVITPYRGQRDLISNQLVKNDLINPEKEEVQVE 544
Query: 774 YENKDGFT------------VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVN 821
+ D + + + SID FQG E++ +++S VR N IGF++ +R+N
Sbjct: 545 VDRDDIYNESKPVTVHLVSGIMIASIDAFQGREKNFLVMSCVRSNEERKIGFLNDKRRLN 604
Query: 822 VALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADE 865
VALTRA++ L ++G + + + + +W + + + F++DE
Sbjct: 605 VALTRAKYGLILIG-DVSCLKGDELWREYLEFLEKKGSVFSSDE 647
Score = 50.8 bits (120), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 21/128 (16%)
Query: 202 LPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQ 261
+P R++ ++ N K I +LG + + Q K +F + +NESQ
Sbjct: 144 VPVSRVFLAMSRIDNPKFIKMLLGNEPI-------------KQIVFKNFLTFKNRINESQ 190
Query: 262 VGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC-RTLACTPTNVAIT 320
A+ + L + + ++ GPPGTGKT T+ ++L LL +K L +N+AI
Sbjct: 191 KVAVQSVLN-------NAITVLQGPPGTGKTSTIHEIILQLLELKTFPILVVAASNIAID 243
Query: 321 ELASRVLK 328
+A +++K
Sbjct: 244 NIAEKLIK 251
>gi|297293250|ref|XP_002804225.1| PREDICTED: uncharacterized protein C4orf21-like [Macaca mulatta]
Length = 2073
Score = 137 bits (344), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 146/274 (53%), Gaps = 16/274 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVE-SKISDEAGFGRSLFERLTS 652
+V+DE +Q+ E S +P+ +L+GD QLP ++ S + E G ++LF+RL
Sbjct: 1775 VVLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCL 1834
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ H LL QYR HP+IS N FY+ +++G +S ++L T F N+
Sbjct: 1835 MGHKPILLRTQYRCHPAISAIANDLFYKGTLMNGITEIERSPLLEWLP-----TLCFYNV 1889
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI-G 771
G + +S N+ E + +K++Q L + + IGV++ Y +Q+ + +
Sbjct: 1890 KGLEQIERDNSFHNVAEATFTLKLIQSLIASGIAGSM---IGVITLYKSQMYKLCHLLSA 1946
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
++ + D TV+V ++D FQG E++III+S VR +GFI +R+NVALTR + L
Sbjct: 1947 VDFGHPDIKTVQVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRGKRHL 2003
Query: 832 WILGSERTLISSESIWGALV--CDAKARQCFFNA 863
I+G+ + +WG ++ C+ K + C +A
Sbjct: 2004 LIVGN-LACLRKNRLWGRVIQHCEGKIKMCLIHA 2036
>gi|159114110|ref|XP_001707280.1| Regulator of nonsense transcripts 1-like protein [Giardia lamblia
ATCC 50803]
gi|112735207|gb|ABI20695.1| UPF1 [Giardia intestinalis]
gi|157435384|gb|EDO79606.1| Regulator of nonsense transcripts 1-like protein [Giardia lamblia
ATCC 50803]
Length = 1304
Score = 136 bits (343), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 190/391 (48%), Gaps = 32/391 (8%)
Query: 474 SENSFQEMVALKSLLDSFGNLLFQDN-----VVSKELEKLFSHSVDEGISWAFVRKRYLL 528
S N++ + V L L + L D+ SKE ++ + +DE F L
Sbjct: 902 SPNTYADRVCLHVLFEEILKLTLGDDAPSDFTPSKEARLIYENMLDEIPVKQFNEVYNYL 961
Query: 529 QLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEI 588
Q+ ++ E + V L S +E + + +E+ A + T S+SY H +
Sbjct: 962 QM--KKKENIDVA--LKQSAEE---EISKAMFEIENIIISSAKVVVCTCSTSYDNHLSRV 1014
Query: 589 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
+ L++DE+ Q E ++ + G +H VL+GD QL +V + I+ + SL+E
Sbjct: 1015 H-FSSLIVDESTQAIEPDTLCAIG-HGCSHIVLMGDHKQLGPIVATNIARHSKLDLSLYE 1072
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF---- 704
RL H L +QYRMHP++S FP+ FY + +G + + L+ F
Sbjct: 1073 RLQRAGIEPHSLTVQYRMHPALSAFPSNTFYNGMLQNGVTQADRQLIPKPLSIDSFPWPI 1132
Query: 705 -GTYSFI-NIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ 762
T SF ++ G E S RN E+ V I+ +L K + ++ IG+V+PY Q
Sbjct: 1133 PSTPSFFWHVQGTHEIGHGTSLRNDTEILCVEAIVDQLLKCY--ELKQSDIGIVTPYDYQ 1190
Query: 763 VVAIRKKIGFEYENKD-GFT-VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRV 820
K E + KD G++ V V S+D FQG E+++II STVR + IGF+ +R+
Sbjct: 1191 ------KCQIEMQLKDAGYSEVFVNSVDAFQGHEKEVIIFSTVR-SVDKHIGFLKDQRRL 1243
Query: 821 NVALTRARHCLWILGSERTLISSESIWGALV 851
NV LTR R L I+G+ T ++ +S W +L+
Sbjct: 1244 NVGLTRCRCALIIVGNA-TALAIDSTWRSLI 1273
>gi|17380277|sp|O76512.1|RENT1_CAEEL RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=ATP-dependent helicase smg-2; AltName:
Full=Nonsense mRNA reducing factor 1; AltName:
Full=Up-frameshift suppressor 1 homolog
gi|3328177|gb|AAC26789.1| nonsense-mediated mRNA decay trans-acting factor [Caenorhabditis
elegans]
Length = 1069
Score = 136 bits (343), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 163/330 (49%), Gaps = 34/330 (10%)
Query: 559 KLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINH 618
K V E A + T SS+ +I+ L IDE+ Q E E + + + G+
Sbjct: 573 KRVKEHELLAAADVICCTCSSAADARLSKIRTRTVL-IDESTQATEPEILVSI-MRGVRQ 630
Query: 619 AVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQF 678
VL+GD CQL +V K + AG +SLFERL L L +QYRMHP +S FP+ F
Sbjct: 631 LVLVGDHCQLGPVVICKKAAIAGLSQSLFERLVLLGIRPFRLQVQYRMHPVLSEFPSNVF 690
Query: 679 YRNQILDGANVKSKSYEKQYLTGTEF-----GTYSFINIIGGREDFIYHSCR--NIVEVS 731
Y + +G + ++TG ++ +F G E+ N E +
Sbjct: 691 YDGSLQNGVTENDR-----HMTGVDWHWPKPNKPAFFWHCSGSEELSASGTSFLNRTEAA 745
Query: 732 AVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFE-------YENKDGFTVKV 784
V K++ KL KA V Q IGV++ Y Q I + + YEN V++
Sbjct: 746 NVEKLVSKLIKAGVQPHQ---IGVITSYEGQRSFIVNYMHTQGTLNSKLYEN-----VEI 797
Query: 785 KSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSE 844
S+D FQG E+D II++ VR N IGF+S P+R+NVA+TRA++ L ++G+ + L +
Sbjct: 798 ASVDAFQGREKDYIIVTCVRSNDILGIGFLSDPRRLNVAITRAKYGLVLVGNAKVL-ARH 856
Query: 845 SIWGALVCDAKARQCFF----NADEERNLA 870
+W L+ K+++ + NA + NLA
Sbjct: 857 DLWHELINHYKSKEMLYEGPINALKPLNLA 886
Score = 47.0 bits (110), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL-RIKCRTLACTPT 315
LN SQ+ A+ L R + LI GPPGTGKT + ++ L+ + + L C+P+
Sbjct: 446 LNSSQMQAVKQVLTR-------PLSLIQGPPGTGKTVVSATIVYHLVQKTEGNVLVCSPS 498
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N+A+ LA ++ LK+V+ + S T +
Sbjct: 499 NIAVDHLAEKIHKTGLKVVRLCARSREHSETTV 531
>gi|291243686|ref|XP_002741733.1| PREDICTED: regulator of nonsense transcripts 1-like, partial
[Saccoglossus kowalevskii]
Length = 974
Score = 136 bits (343), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 154/312 (49%), Gaps = 25/312 (8%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IP L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 479 ILIDESTQATEPECMIPAVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 537
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G +S + +
Sbjct: 538 GIRPIRLQVQYRMHPILSSFPSNIFYEGSLQNGVTPGERSNKSLDFPWPQTDKPMLFYAT 597
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI + + + +Q IG+++PY Q I
Sbjct: 598 TGQEEIASSGTSYLNRTEAANVEKITTRFLRCGIRPEQ---IGIITPYEGQRSFI----- 649
Query: 772 FEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
+Y +G +++ S+D FQG E+D II+S VR N IGF++ P+R+NVAL
Sbjct: 650 VQYMQHNGSLHAKLYQEIEIASVDAFQGREKDYIILSCVRANEHQGIGFLNDPRRLNVAL 709
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIG 884
TR + + I+G+ + L S +++W L+ K ++ NL ++ ++ SK
Sbjct: 710 TRCKFGIIIVGNPKVL-SKQALWNHLLNHYKEQKVLVEG-PLNNLKESMIQFSKP----- 762
Query: 885 AESLTSTSQGGK 896
+ + +T+ GG+
Sbjct: 763 RKLINTTNPGGR 774
Score = 48.5 bits (114), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 12/103 (11%)
Query: 247 EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK 306
++F LN SQV A+ L+R + LI GPPGTGKT T + ++ L +
Sbjct: 307 KRFSAPGLPELNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATVVYHLSKQN 359
Query: 307 C-RTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 360 LGQVLVCAPSNIAVDQLTEKIHRTGLKVVRLCAKSREAIDSPV 402
>gi|190345609|gb|EDK37526.2| hypothetical protein PGUG_01624 [Meyerozyma guilliermondii ATCC
6260]
Length = 650
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 193/404 (47%), Gaps = 54/404 (13%)
Query: 500 VVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLP-CTTS 558
+VS E EK +S D ++ + + L Q+ + + LR ++++ + + T
Sbjct: 260 IVSNEKEKEYSR--DHPLASICLHHKVYDALPQQMKQTVDDLRRPFSNVSQNSYKKLLTQ 317
Query: 559 KLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINH 618
++ L D +A + F+T + +K L +++DEA Q E + IPL + G++
Sbjct: 318 QIKLSDMFTAQAKVIFTTTVVAGGNQLKSVKKLPVVIMDEATQSSEPTTLIPLSMPGVDK 377
Query: 619 AVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHS---KHLLNIQYRMHPSISLFPN 675
V +GD+ QL S S SLFER+ LN+S H+L+ QYRMHP+IS FP
Sbjct: 378 FVFVGDQRQL-----SSFSMVPNLSLSLFERVL-LNNSYRNPHMLDTQYRMHPAISEFPR 431
Query: 676 LQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCR--------NI 727
++FY + DG ++ + E Y + RED + + R N+
Sbjct: 432 VKFYDELLKDGITADDRAMD----NIPENPVYFWDTKGKAREDRVRYGFREDRGYTYSNL 487
Query: 728 VEVSAVIKILQKL-YKAWVGSKQKVSIGVVSPYTAQVVAI-------------RKKIGFE 773
E+ V K+L KL Y V K IGV++PY Q I ++++ E
Sbjct: 488 NEIEYVTKVLMKLIYDKQVS---KSDIGVITPYRGQRDLISNQLVKNDLINPEKEEVQVE 544
Query: 774 YENKDGFT------------VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVN 821
+ D + + + SID FQG E++ +++S VR N IGF++ +R+N
Sbjct: 545 VDRDDIYNESKPVTVHLVSGIMIASIDAFQGREKNFLVMSCVRSNEERKIGFLNDKRRLN 604
Query: 822 VALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADE 865
VALTRA++ L ++G + + + + +W + + + F++DE
Sbjct: 605 VALTRAKYGLILIG-DVSCLKGDELWREYLEFLEKKGSVFSSDE 647
Score = 48.1 bits (113), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 21/128 (16%)
Query: 202 LPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQ 261
+P R++ ++ N K I +LG + + Q K +F + +NESQ
Sbjct: 144 VPVSRVFLAMSRIDNPKFIKMLLGNEPI-------------KQIVFKNFLTFKNRINESQ 190
Query: 262 VGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC-RTLACTPTNVAIT 320
A+ + L + + ++ GPPGTGKT T+ ++L L +K L +N+AI
Sbjct: 191 KVAVQSVLN-------NAITVLQGPPGTGKTSTIHEIILQLSELKTFPILVVAASNIAID 243
Query: 321 ELASRVLK 328
+A +++K
Sbjct: 244 NIAEKLIK 251
>gi|413949646|gb|AFW82295.1| hypothetical protein ZEAMMB73_646273 [Zea mays]
Length = 626
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/128 (53%), Positives = 90/128 (70%), Gaps = 5/128 (3%)
Query: 730 VSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDG 789
V A + I++ L ++ K+SIGVV PYTAQV AI++K+G D F+VKVK +DG
Sbjct: 332 VFAFLSIVETL-----STRSKLSIGVVCPYTAQVRAIQEKVGKACGRNDYFSVKVKFVDG 386
Query: 790 FQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGA 849
FQG EEDIIIIS VR N G++GF+S QR NVALTRA+HCLWI+G+ TL +S S+W
Sbjct: 387 FQGAEEDIIIISIVRSNGAGTVGFLSNLQRTNVALTRAKHCLWIVGNGTTLFNSNSVWQK 446
Query: 850 LVCDAKAR 857
+V D + R
Sbjct: 447 IVKDTRDR 454
>gi|409082016|gb|EKM82374.1| hypothetical protein AGABI1DRAFT_111018 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 463
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 140/274 (51%), Gaps = 10/274 (3%)
Query: 609 IPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHP 668
IPL L G VL+GD QL ++ +K + AG +SLFERL L + L +QYRMHP
Sbjct: 2 IPLVL-GCKQVVLVGDHQQLGPVIMNKKAARAGLTQSLFERLVVLGNRPIRLQVQYRMHP 60
Query: 669 SISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCR--N 726
+S FP+ FY + +G + + T F G+E+ N
Sbjct: 61 CLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVPDTPMFFYQNLGQEEISSSGTSFLN 120
Query: 727 IVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYE-NKDGFT-VKV 784
E S V KI+ K +K+ V Q IG+V+PY Q I + F KD + ++V
Sbjct: 121 RTEASNVEKIVTKFFKSGVVPNQ---IGIVTPYEGQRSYIVNYMQFNGSLKKDLYKEIEV 177
Query: 785 KSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSE 844
S+D FQG E+D II+S VR N IGF++ P+R+NVALTRA++ + ILG+ + L S
Sbjct: 178 ASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVL-SKH 236
Query: 845 SIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
+W L+ K + C NL + ++ SK
Sbjct: 237 PLWHYLLTHYKEKNCLVEG-PLNNLQPSMIQFSK 269
>gi|334311942|ref|XP_001370697.2| PREDICTED: probable helicase senataxin [Monodelphis domestica]
Length = 2675
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 153/286 (53%), Gaps = 33/286 (11%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ P + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 2162 PFSCVIVDEAGQSCEIETLTPF-IHRCNKLILVGDPKQLPPTVISVKAQEYGYDQSMMAR 2220
Query: 650 LTSLNHSKHL----------------LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKS 693
L KHL L +QYRMHP I LFP+ Y N+ L + +
Sbjct: 2221 LY-----KHLEEQVKQNVISRSPVLQLTVQYRMHPDICLFPSSYIY-NRTLKTNRL---T 2271
Query: 694 YEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSI 753
E + + F Y ++ G E S N+ E+ V++++ KL K +I
Sbjct: 2272 EESRCTSDWPFQPYLVFDVGDGSERRENDSYVNVQEIKLVMELI-KLIKDRRKDITMRNI 2330
Query: 754 GVVSPYTAQVVAIRKKIGFEYE-NKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG-GSI 811
G+++ Y AQ + I++++ E+E N+ G +V ++D FQG ++D +I++ VR N GSI
Sbjct: 2331 GIITHYKAQKMMIQQELDKEFERNRPG---EVDTVDAFQGRQKDCVIVTCVRANASQGSI 2387
Query: 812 GFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
GF++ QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 2388 GFLASLQRLNVTITRAKYSLFILGHLRTLMENQH-WNHLIQDAQKR 2432
Score = 45.1 bits (105), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKC----------------RTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL +L K R L C P+N A+ EL +
Sbjct: 1948 LIHGPPGTGKSKTIVGLLYRILTEKPKRGDSDENLNAKIKRNRVLVCAPSNAAVDELMKK 2007
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K + N P+ GDI L
Sbjct: 2008 IILEFKE--KCQDKKN-PLGNCGDINL 2031
>gi|145539554|ref|XP_001455467.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423275|emb|CAK88070.1| unnamed protein product [Paramecium tetraurelia]
Length = 762
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/283 (36%), Positives = 154/283 (54%), Gaps = 32/283 (11%)
Query: 569 RASLFFSTASSSYK--LHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDEC 626
+A + F T SSS L E+K + ++IDEAAQ E + IPLQ G +LIGD
Sbjct: 429 QAKVIFGTLSSSGSNVLALSELK-FDTVIIDEAAQAVEISTLIPLQY-GCRRLILIGDPN 486
Query: 627 QLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG 686
QLPA + S I + + +SLFERL + HLL QYRMH IS F + FY +++ D
Sbjct: 487 QLPATIFSSICGKYKYDQSLFERLQKQGANVHLLKTQYRMHAKISKFISTTFYGSELND- 545
Query: 687 ANVKSKSYEK-QYLTGT----EFGTYSFINI--IGGREDFIYHSCRNIVEVSAVIKILQK 739
YE + L GT ++ TYS + + + G E+F +S N +E V ++ +
Sbjct: 546 -------YEYLERLIGTPKFYDYYTYSPVVVLHVKGYENFTRNSYCNEMEAKVVTELYKD 598
Query: 740 LYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIII 799
+ K + ++G+VSPY+ QV I K++ E V+VK++DGFQG E+D+II
Sbjct: 599 M-KNKFPTFNMNNLGIVSPYSQQVWLISKQLKKMNEE----NVEVKTVDGFQGREKDVII 653
Query: 800 ISTVRC--------NTGGSIGFISKPQRVNVALTRARHCLWIL 834
S+VR N +GF+S +R+NV+L+R R L ++
Sbjct: 654 FSSVRSKFISENQKNPKKGVGFLSDARRMNVSLSRCRQTLIVV 696
Score = 42.4 bits (98), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 181 NNMQVHDKTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQ 240
N + K+ K+FF +T + +R + +LH G + + +L ++ V
Sbjct: 160 NQQNPNQKSLKNFFIRKVTGLSTLEREFRALHKFGELMLKSILLSLEA-------QPKVN 212
Query: 241 RKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLL 300
K S N SQ A+ L+ G+ LI GPPGTGKTKTV L
Sbjct: 213 SYFTIPYKLDQKLHSIYNSSQYEAIQQTLKT------HGITLIQGPPGTGKTKTVLGTLS 266
Query: 301 TLLRIK 306
LL+ K
Sbjct: 267 VLLQSK 272
>gi|426199843|gb|EKV49767.1| hypothetical protein AGABI2DRAFT_190222 [Agaricus bisporus var.
bisporus H97]
Length = 463
Score = 135 bits (341), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 140/274 (51%), Gaps = 10/274 (3%)
Query: 609 IPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHP 668
IPL L G VL+GD QL ++ +K + AG +SLFERL L + L +QYRMHP
Sbjct: 2 IPLVL-GCKQVVLVGDHQQLGPVIMNKKAARAGLTQSLFERLVVLGNRPIRLQVQYRMHP 60
Query: 669 SISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCR--N 726
+S FP+ FY + +G + + T F G+E+ N
Sbjct: 61 CLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVPDTPMFFYQNLGQEEISSSGTSFLN 120
Query: 727 IVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYE-NKDGFT-VKV 784
E S V KI+ K +K+ V Q IG+V+PY Q I + F KD + ++V
Sbjct: 121 RTEASNVEKIVTKFFKSGVVPNQ---IGIVTPYEGQRSYIVNYMQFNGSLKKDLYKEIEV 177
Query: 785 KSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSE 844
S+D FQG E+D II+S VR N IGF++ P+R+NVALTRA++ + ILG+ + L S
Sbjct: 178 ASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVL-SKH 236
Query: 845 SIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
+W L+ K + C NL + ++ SK
Sbjct: 237 PLWHYLLTHYKEKNCLVEG-PLNNLQPSMIQFSK 269
>gi|449265846|gb|EMC76976.1| hypothetical protein A306_15842 [Columba livia]
Length = 911
Score = 135 bits (341), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 143/265 (53%), Gaps = 14/265 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVE-SKISDEAGFGRSLFERLTS 652
+++DE +Q+ E S +P+ VL+GD QLP ++ S+ E G ++LF+RL
Sbjct: 622 VMLDECSQMTEPASLLPIARFQCEKLVLVGDPKQLPPAIQGSESVHEKGLEQTLFDRLCL 681
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ H+ LL QYR HP+IS N FY ++DG + +S +L T F ++
Sbjct: 682 MGHTTILLRTQYRCHPAISAIANELFYEGNLIDGVSANDRSPLLDWLP-----TLCFYSV 736
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI-G 771
G + +S N+ EV +K++Q L + + + +IGV++ Y +Q+ I+ +
Sbjct: 737 NGVEQIERDNSFYNMAEVHFTVKLIQALTASGI---EGSAIGVITLYKSQMCKIQNLLSS 793
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
+ E + V+V ++D FQG E++II++S VR GFI +R+NVALTRA+ L
Sbjct: 794 VQSEAFETKAVQVSTVDAFQGAEKEIIVLSCVRTR---QFGFIDSEKRMNVALTRAKRHL 850
Query: 832 WILGSERTLISSESIWGALVCDAKA 856
I+G+ L S +WG ++C K
Sbjct: 851 LIVGNLACL-SKNRLWGRVICHCKG 874
>gi|440291801|gb|ELP85043.1| splicing endonuclease positive effector sen1, putative [Entamoeba
invadens IP1]
Length = 1569
Score = 135 bits (341), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 137/256 (53%), Gaps = 31/256 (12%)
Query: 595 VIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLN 654
+IDEA Q E + IPL+ G+ ++IGD+ QLP+ V S S + +SLFERL
Sbjct: 494 IIDEAVQCVEVSALIPLKY-GVERCIMIGDQKQLPSTVLSPKSITYKYNKSLFERLLECG 552
Query: 655 HSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIG 714
+ LL QYRM I FP+ +FY ++ DG ++ + + F+N+ G
Sbjct: 553 LNVTLLTQQYRMESKIREFPSNEFYEGRLADGVKIEK--------INSVSNSVLFLNVCG 604
Query: 715 -----GREDFIYHSCRNIVEVSAVIKILQKLYKA-----WVGSKQKVSIGVVSPYTAQVV 764
G+E ++ N EV AV+ +L ++ K W IG+++PY QV+
Sbjct: 605 KEDRLGKESSLF----NTEEVKAVVFLLTEISKNVECVHW-------DIGIITPYRKQVL 653
Query: 765 AIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
++K I + E V V ++DGFQG E DI+I+S VR + IGF+ +R+NVA+
Sbjct: 654 DVKKAIE-QNEVAKSLNVLVNTVDGFQGREFDIVIMSCVRSSEHNGIGFVEDERRLNVAI 712
Query: 825 TRARHCLWILGSERTL 840
TRA+ L ++G+ +TL
Sbjct: 713 TRAKRALCVVGNIKTL 728
Score = 46.6 bits (109), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 19/86 (22%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC--------- 307
N+SQ+ AM L +SG LI GPPGTGKT T+ ++ +L
Sbjct: 278 FNDSQIHAMFRSL------AKSGFSLIQGPPGTGKTMTLCGIIGVILYGNSSSVFSKSSE 331
Query: 308 ----RTLACTPTNVAITELASRVLKL 329
R L C+P+N AI + ++LK+
Sbjct: 332 SHHERVLICSPSNAAIDGIIMKLLKM 357
>gi|412987528|emb|CCO20363.1| predicted protein [Bathycoccus prasinos]
Length = 985
Score = 135 bits (341), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 150/280 (53%), Gaps = 37/280 (13%)
Query: 593 FLVIDEAAQLKESESTIPL--QLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
+ +DEAAQ E + IPL LAG VL+GD QLP V S+ + G RSL ERL
Sbjct: 694 YAFVDEAAQCVEPHTLIPLTKALAG----VLVGDTKQLPPTVVSRDAVAIGLQRSLIERL 749
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGT---- 706
L +LL QYRMHP ++ F +++FY ++ K E+ G + +
Sbjct: 750 ELLGVEPYLLEEQYRMHPGLAAFSSVRFYDRRL----KSVPKPSERVAPNGVNWPSTMVP 805
Query: 707 YSFINIIGGREDFIY---HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQV 763
+F+ + G E+ +S N+ E ++++QKL + K IG+++PY AQV
Sbjct: 806 LAFVEVKG--EEMRAPDGNSIFNVQEAEECVRVVQKLLLSG-DVKNAGDIGIIAPYAAQV 862
Query: 764 VAI----RKKIGFEYENKDGFTVK------------VKSIDGFQGGEEDIIIISTVRCNT 807
AI +K+ + + K+ V+ ++S+DGFQG E+++I++ TVR N
Sbjct: 863 RAISEEWNRKVTSDVKLKNTSVVEADNPESAKDELEIRSVDGFQGREKEVIVLCTVRNNR 922
Query: 808 GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIW 847
+GF++ P+R+NVA+TRA+ L +LG TL S++ +W
Sbjct: 923 QNQLGFVADPRRLNVAITRAKRGLIVLGHRDTL-STDQLW 961
>gi|294875682|ref|XP_002767434.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239869001|gb|EER00152.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 559
Score = 135 bits (341), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 142/265 (53%), Gaps = 22/265 (8%)
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS 652
+++DEA Q E E+ IP+ G +L+GD QL +V K + +AGF +SLFERL +
Sbjct: 179 MVLVDEATQACEPEALIPI-CNGAKQVILVGDHKQLGPVVMCKKAAKAGFKQSLFERLIA 237
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFG------T 706
L L +QYRMHPS++ FP+ FY DG + E + ++G +F
Sbjct: 238 LGVRPIRLEVQYRMHPSLAEFPSQTFY-----DGCLQNGITMEDRQVSGVKFPWPREEMP 292
Query: 707 YSFINIIGGREDFIYHSCRNIVEVSAVI---KILQKLYKAWVGSKQKVSIGVVSPYTAQV 763
F N G E I S + + S I KI+ +A + Q IGVV+PY Q
Sbjct: 293 MFFYNSTGQEE--ISASGTSYLNRSEAINIEKIITYFLRAGLKGSQ---IGVVTPYEGQR 347
Query: 764 VAIRKKIGFE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVN 821
I++ + + K ++++ S+D FQG E+D I++S VR N +GF++ P+R+N
Sbjct: 348 AYIQQVLQRQTTLSAKMYESIEIASVDAFQGREKDFIVLSCVRSNQRAGLGFLNDPRRLN 407
Query: 822 VALTRARHCLWILGSERTLISSESI 846
VALTRAR+ L I G+ + L + ++
Sbjct: 408 VALTRARYGLVICGNAQVLARATTV 432
Score = 45.1 bits (105), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 12/80 (15%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACTPT 315
LN SQV A+ L + + LI GPPGTGKT T + ++ L R + + L P+
Sbjct: 16 LNHSQVQAVQKALEQ-------PLSLIQGPPGTGKTVTSATIIYHLARQHQGQVLVTAPS 68
Query: 316 NVAITELASRV----LKLVK 331
N+A+ +LA ++ LK+V+
Sbjct: 69 NIAVDQLAEKIHLTGLKVVR 88
>gi|198435823|ref|XP_002122130.1| PREDICTED: similar to regulator of nonsense transcripts 1 [Ciona
intestinalis]
Length = 1094
Score = 135 bits (341), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 125/239 (52%), Gaps = 8/239 (3%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 624 ILIDESTQATEPECMVPVVL-GAQQLILVGDHCQLGPVVMCKKAANAGLAQSLFERLVVL 682
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP++S FP+ FY + +G + + F
Sbjct: 683 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAGERMRKNLSFVWPSPDKPMFFYKT 742
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V +I K K+ + +Q IG+++PY Q + + +
Sbjct: 743 SGQEEIASSGTSYLNRTEAAVVERITTKFLKSGIKPEQ---IGIITPYEGQRSYLVQYMQ 799
Query: 772 F--EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
+ +K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTRAR
Sbjct: 800 YSGSLHSKLYMEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 858
Score = 49.7 bits (117), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 247 EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI- 305
++F LN SQV A+ L+R C LI GPPGTGKT T + ++ L++
Sbjct: 451 KRFSAPGLPELNHSQVYAVKTVLQRPLC-------LIQGPPGTGKTVTSATIVYHLVKSC 503
Query: 306 -KCRTLACTPTNVAITELASRV----LKLVK 331
+ + L C P+N+A+ +L ++ LK+V+
Sbjct: 504 GQRQVLVCAPSNIAVDQLTEKIHRTGLKVVR 534
>gi|343415926|emb|CCD20512.1| hypothetical protein, conserved (fragment) [Trypanosoma vivax Y486]
Length = 794
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 142/275 (51%), Gaps = 31/275 (11%)
Query: 592 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT 651
+F++IDEA+Q E E+ +PL G L+GD QL +V S ++ + GF RSLFERL
Sbjct: 509 DFVLIDEASQATEPETLVPL-FRGEKQVALVGDHRQLGPVVLSNVAGKKGFARSLFERLA 567
Query: 652 SLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
LN+QYR HP I F ++ FY +LDG + + G + + N
Sbjct: 568 GAGSEITQLNLQYRTHPFIYRFSSMAFYGGTVLDGVPAEKRDAS---------GIFPWPN 618
Query: 712 IIGGREDFIYHSCRNIVEVS-------------AVIKILQKLYKAWVGSKQKVSIGVVSP 758
+ +++ C + EV A I ++ + ++ G+ + +G++SP
Sbjct: 619 P---EKPMLFYDCSGVEEVGDSGASFLNEAEARATISVVDAVLES--GAVRPDEVGIISP 673
Query: 759 YTAQVVAIRKK-IGFEYENKDGF-TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISK 816
Y AQ +R++ + + KD + V++ ++D +QG E++III+S VR N ++GFI
Sbjct: 674 YRAQCEYMRERLLQWGTAGKDIYEKVEISTVDAYQGREKEIIILSCVRNNEERTVGFIGD 733
Query: 817 PQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
+R+NV+LTRAR L +G L + W L+
Sbjct: 734 ERRLNVSLTRARRGLIAIGKAEAL-RGDKCWSKLL 767
Score = 54.7 bits (130), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 56/131 (42%), Gaps = 22/131 (16%)
Query: 228 SVVDERCELCSVQRKGQWDEKFGPSFS--------STLNESQVGAMLACLRRLDCGHRSG 279
S RCE+ + PS LNESQ A+ A L +
Sbjct: 309 SFASSRCEIARAVLGHPSGRRLSPSLQFDEDDEGFKGLNESQQAAVKAALS-------NA 361
Query: 280 VELIWGPPGTGKTKT-VSMLLLTLLRIKCRTLACTPTNVAITELASRVLK------LVKE 332
LI GPPGTGKT T V ++ LLR K R L C P+N A+ L+ + K V+
Sbjct: 362 FTLIQGPPGTGKTSTSVQIIRQLLLRKKTRVLVCAPSNAAVDHLSESMYKNKIDFIRVQP 421
Query: 333 SYKRDSRSNTP 343
Y+ ++ S P
Sbjct: 422 RYREENDSGRP 432
>gi|350407478|ref|XP_003488098.1| PREDICTED: helicase sen1-like [Bombus impatiens]
Length = 1551
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/330 (32%), Positives = 165/330 (50%), Gaps = 35/330 (10%)
Query: 570 ASLFFSTASSSYK-----LHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGD 624
A + T SS Y + V K ++ ++DEA Q E+E+ IPL L GI+ VL+GD
Sbjct: 1240 ADIITCTLSSCYTSQMEYIFGVNKKKISVCIVDEATQSCEAETLIPLML-GIDTLVLVGD 1298
Query: 625 ECQLPAMVESKISDEAGFGRSLFERLTSL-----NHSKHLLNIQYRMHPSISLFPNLQFY 679
QLPA V S + + G +S+F R+ S N+ +L+ QYRM P IS +PN FY
Sbjct: 1299 HNQLPATVLSTRAKKYGLDQSIFSRVQSAFDLQPNNPIIMLDTQYRMQPDISSWPNKFFY 1358
Query: 680 RNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQK 739
++ + F +Y +N++ + H N E V I+
Sbjct: 1359 GCKLKNAVECND---------NFPFHSYRILNLVTNQN----HDNSNNEEADFVANIIYC 1405
Query: 740 LYK-AWVGSKQK-VSIGVVSPYTAQ----VVAIRKKIGFEYEN-KDGFTVKVKSIDGFQG 792
+ A + + Q +S G+++PY Q + + +KI EN K V ++D FQG
Sbjct: 1406 MLNFANLDNWQSCISCGILTPYNNQRSMILTKVNEKISSLPENVKRKIKYIVDTVDRFQG 1465
Query: 793 GEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVC 852
E D+II+S VR IGF+S QR+ VALTRA+H L I G+ + +W +L+
Sbjct: 1466 QECDVIILSCVR---SQKIGFLSDRQRLCVALTRAKHSLIICGNFNIFMRY-PMWNSLIA 1521
Query: 853 DAKARQCFFNADEERNLAKARLEVSKELVE 882
DAKAR+ FFN + N + + V K +++
Sbjct: 1522 DAKARKVFFNVNPNANFHEIKSYVIKRVMK 1551
>gi|355718810|gb|AES06392.1| senataxin [Mustela putorius furo]
Length = 1702
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 149/283 (52%), Gaps = 24/283 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 1201 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 1259
Query: 650 L-----TSLNHS--KHL-------LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYE 695
S+ HS L L +QYRMHP I LFP+ Y + ++
Sbjct: 1260 FYKLLEDSVEHSVVGRLPGLPVLQLTVQYRMHPDICLFPSSYVYNRSLKTSRQTETSRCS 1319
Query: 696 KQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGV 755
+ F Y ++ G E S N+ E+ V++I+ KL K +IG+
Sbjct: 1320 SDW----PFQPYLVFDVGDGSERRDNDSYVNVQEIKLVMEII-KLIKDKRRDVTFRNIGI 1374
Query: 756 VSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFI 814
++ Y AQ I+K + E++ K +V ++DGFQG ++D +I++ VR NT GSIGF+
Sbjct: 1375 ITHYKAQKTMIQKDLDKEFDRKG--PAEVDTVDGFQGRQKDCVIVTCVRANTVQGSIGFL 1432
Query: 815 SKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
+ QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 1433 ASLQRLNVTITRAKYSLFILGHLRTLMENQH-WNHLIQDAQKR 1474
Score = 46.6 bits (109), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 987 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 1046
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K P+ GDI L
Sbjct: 1047 IILEFKEKCK---DKKNPLGNCGDINL 1070
>gi|426222918|ref|XP_004005627.1| PREDICTED: probable helicase senataxin [Ovis aries]
Length = 2662
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 148/281 (52%), Gaps = 23/281 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N VL+GD QLP V S + + G+ +S+ R
Sbjct: 2164 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLVLVGDPKQLPPTVISVKAQDYGYDQSMMAR 2222
Query: 650 LTSL-------NHSKHL----LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L N L L IQYRMHP I LFP+ Y DGA ++ E
Sbjct: 2223 FHKLLEESVEHNMIGRLPVLQLTIQYRMHPDICLFPSSYVY-----DGALKTNRGTETSR 2277
Query: 699 LTGT-EFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVS 757
+ F Y ++ G E S N+ E+ V++++ KL K +IG+++
Sbjct: 2278 CSSDWPFQPYLVFDVGDGLERRDNDSYVNVQEIKLVMELI-KLIKDKRRDINFRNIGIIT 2336
Query: 758 PYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCN-TGGSIGFISK 816
Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR N T GSIGF++
Sbjct: 2337 HYKAQKTMIQKDLDKEFDRKGA--AEVDTVDAFQGRQKDCVIVTCVRANATQGSIGFLAS 2394
Query: 817 PQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ + W L+ DA+ R
Sbjct: 2395 LQRLNVTITRAKYSLFILGHLRTLVENRH-WYHLIQDAQKR 2434
Score = 45.4 bits (106), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ +L LL +IK R L C P+N A+ EL +
Sbjct: 1950 LIHGPPGTGKSKTIVGILYRLLTENQRRGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2009
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K P+ GDI L
Sbjct: 2010 IILEFKEKCK---DKKNPMGNCGDINL 2033
>gi|194750317|ref|XP_001957574.1| GF10480 [Drosophila ananassae]
gi|190624856|gb|EDV40380.1| GF10480 [Drosophila ananassae]
Length = 1728
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 165/319 (51%), Gaps = 47/319 (14%)
Query: 566 CFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDE 625
C RA++ +T SS KL + I + +IDEA Q E + +P++ G+ H VL+GD
Sbjct: 1413 CLSRANIVCTTLSSCVKLANY-IDFFDICIIDEATQCTEPWTLLPMRF-GLRHLVLVGDT 1470
Query: 626 CQLPAMVESKISDEAGFGRSLFERLT-SLN------------HSKHL-LNIQYRMHPSIS 671
QLPA+V S+ + E G S+F+R+ SL H+K L++QYRMHP I
Sbjct: 1471 QQLPAVVLSQKAIEYGLSNSMFDRIQRSLQKQLESPGSNQFIHTKLFKLSVQYRMHPEIC 1530
Query: 672 LFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVE-- 729
+PN FY +Q+ V + EK YS IN+ R D S R+I
Sbjct: 1531 RWPNKYFYEDQL-----VSAPCTEK----SAALIPYSVINLSYTR-DSSTMSNRSISNDE 1580
Query: 730 ----VSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVK 785
V+ +I +QKL ++ S G++SPY+ Q A+ + + + V
Sbjct: 1581 EARFVAKLITAMQKLMPT-----KRYSYGLISPYSNQCYALSQVMT------EDMKVTPL 1629
Query: 786 SIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSES 845
+ID +QG E+D+IIIS R T G GF+S QR+NVALTR + CL I G+ L S +
Sbjct: 1630 TIDAYQGLEKDVIIISYAR--TRG-CGFLSNYQRLNVALTRPKRCLVICGNFDDLQSVD- 1685
Query: 846 IWGALVCDAKARQCFFNAD 864
+W L+ DA+ R +F+ +
Sbjct: 1686 MWRQLLDDARQRNVYFDVE 1704
>gi|402896228|ref|XP_003911208.1| PREDICTED: probable helicase senataxin [Papio anubis]
Length = 2679
Score = 135 bits (339), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 150/282 (53%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 2177 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2235
Query: 650 LTSL--NHSKH---------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L + +H L +QYRMHP I LFP+ Y N+K+ +
Sbjct: 2236 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYIY------NRNLKTNRQTETI 2289
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
++ F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 2290 RCSSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGII 2348
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR N+ GSIGF++
Sbjct: 2349 THYKAQKTMIQKDLDKEFDRKG--PAEVDTVDAFQGRQKDCVIVTCVRANSVQGSIGFLA 2406
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 2407 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 2447
Score = 47.0 bits (110), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1963 LIHGPPGTGKSKTIVGLLYCLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2022
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K P+ GDI L
Sbjct: 2023 IILEFKEKCK---DKKNPLGNCGDINL 2046
>gi|183230332|ref|XP_654283.2| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|169802981|gb|EAL48897.2| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 965
Score = 135 bits (339), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/280 (35%), Positives = 152/280 (54%), Gaps = 29/280 (10%)
Query: 595 VIDEAAQLKESESTIPLQLAGI---NHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT 651
++DEAAQ E E+ LAGI AVLIGD QL S + EAGF +S+FER
Sbjct: 650 IVDEAAQSLEPET-----LAGIINVRKAVLIGDIQQLQPTCLSTEAREAGFQKSMFERFM 704
Query: 652 SLNHSKH-LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYS-- 708
+ K +L QYRMHP+IS F N FY +++ +G + K + ++ + + F Y+
Sbjct: 705 ANTQIKRTMLKTQYRMHPAISEFSNKMFYSSKLENGVSSKDR-FDNRIINF--FPDYTNP 761
Query: 709 --FINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSK-QKVSIGVVSPYTAQVVA 765
FIN G + Y S + ++I+Q++ + + + ++ IG++SPY AQ
Sbjct: 762 IMFINCDGTEQ---YGSSGTSYNNAGEVQIIQEVVEKLLNNDIEENEIGIISPYQAQQEL 818
Query: 766 IRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALT 825
I + + + +KV +IDGFQG E++ II S VR N +GF++ +R+NVALT
Sbjct: 819 ISQYVSTK--------IKVANIDGFQGNEKEYIIFSCVRSNQTLGVGFVNDYKRLNVALT 870
Query: 826 RARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADE 865
RA+ L I+G+ TL++S+ +W L+ R F E
Sbjct: 871 RAKRGLIIIGNIPTLVTSK-VWNMLIHQFYLRDALFELKE 909
>gi|308161426|gb|EFO63875.1| Regulator of nonsense transcripts 1-like protein [Giardia lamblia
P15]
Length = 1303
Score = 135 bits (339), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 190/391 (48%), Gaps = 32/391 (8%)
Query: 474 SENSFQEMVALKSLLD-----SFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLL 528
S N++ + V L L + + G+ D SKE ++ + +DE F L
Sbjct: 901 SPNTYADRVCLHVLFEEVLKLALGDDAPSDFTPSKEARLIYENMLDEIPIKQFNEVYNYL 960
Query: 529 QLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEI 588
Q+ ++ E + V L S +E + + +E+ A + T S+SY H +
Sbjct: 961 QM--KKKENIDVA--LKQSAEE---EISKAMFEIENIIISSAKVVICTCSTSYDNHLSRV 1013
Query: 589 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
+ L++DE+ Q E ++ + G +H VL+GD QL +V + I+ + SL+E
Sbjct: 1014 H-FSSLIVDESTQAIEPDTLCAIG-HGCSHIVLMGDHKQLGPIVATNIARHSKLDLSLYE 1071
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF---- 704
RL H L +QYRMHP++S FP+ FY + +G + + L+ F
Sbjct: 1072 RLQRAGIEPHSLTVQYRMHPALSAFPSNTFYNGMLQNGVTQADRQLVPKPLSTESFPWPM 1131
Query: 705 -GTYSFI-NIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ 762
T SF ++ G E S RN E+ V I+ +L K + ++ IG+V+PY Q
Sbjct: 1132 PSTPSFFWHVQGTHEIGHGTSLRNDTEILCVEAIVDQLLKCY--ELKQGDIGIVTPYDYQ 1189
Query: 763 VVAIRKKIGFEYENKD-GFT-VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRV 820
K E + KD G++ V V S+D FQG E+++II STVR + IGF+ +R+
Sbjct: 1190 ------KCQIEMQLKDAGYSEVFVNSVDAFQGHEKEVIIFSTVR-SVDKHIGFLKDQRRL 1242
Query: 821 NVALTRARHCLWILGSERTLISSESIWGALV 851
NV LTR R L I+G+ T ++ + W +L+
Sbjct: 1243 NVGLTRCRCALIIVGNA-TALAIDDTWRSLI 1272
>gi|390945185|ref|YP_006408946.1| type III restriction enzyme, res subunit [Belliella baltica DSM
15883]
gi|390418613|gb|AFL86191.1| Type III restriction enzyme, res subunit [Belliella baltica DSM
15883]
Length = 643
Score = 135 bits (339), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 153/304 (50%), Gaps = 33/304 (10%)
Query: 561 VLEDF----CFKRASLFFST--ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLA 614
+LE++ F+ +F ST SS+ L ++ ++ IDEA Q E+ + IP+ A
Sbjct: 329 ILENYIMYDVFQMTQVFASTLVGSSNQALKGIDFP---YVFIDEAGQGLEAATWIPIMKA 385
Query: 615 GINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLN-HSKHLLNIQYRMHPSISLF 673
V+ GD QLP ++S + +AG +LFE++ + +L +QYRM I F
Sbjct: 386 --EKVVMTGDHLQLPPTIKSYEAAKAGLSETLFEKVIKRQPEASKMLTVQYRMPEKIMGF 443
Query: 674 PNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYH------SCRNI 727
+ FY+N + N +LT E FI+ G F H S N
Sbjct: 444 SSKLFYKNNLEAAVNTHI-----HFLTEEE-SVLEFIDTAGS--GFSEHQEKESLSTLNA 495
Query: 728 VEVSAVIKILQKLYKAWVGSKQKV---SIGVVSPYTAQVVAIRKKI--GFEYENKDGFT- 781
E +K L+ L K K K +IG++SPY AQV ++ I +EY N F+
Sbjct: 496 EEAKFTLKYLENLLKRVGIGKIKTEGWNIGLISPYRAQVRKFQELIFESYEYPNLRSFSE 555
Query: 782 -VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTL 840
+ + SIDGFQG E DII IS VR N G IGF+S +R+NVALTRA+ L ++G TL
Sbjct: 556 LLTIDSIDGFQGQERDIIFISLVRSNANGEIGFLSDTRRMNVALTRAKRKLVVIGDSSTL 615
Query: 841 ISSE 844
S++
Sbjct: 616 SSND 619
Score = 45.4 bits (106), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 13/84 (15%)
Query: 251 PSFSST-------LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL 303
PSFS LN +Q A+ RL V +I GPPGTGKT T+ + +L
Sbjct: 170 PSFSQKVYHDLQELNPAQNQAL-----RL-INQSDDVAIIHGPPGTGKTTTLIAAIQNIL 223
Query: 304 RIKCRTLACTPTNVAITELASRVL 327
+ + L C P+N A+ L +++
Sbjct: 224 KTNRQVLVCAPSNAAVDLLVEKLV 247
>gi|110637960|ref|YP_678167.1| DNA helicase [Cytophaga hutchinsonii ATCC 33406]
gi|110280641|gb|ABG58827.1| DNA helicase [Cytophaga hutchinsonii ATCC 33406]
Length = 611
Score = 135 bits (339), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 139/259 (53%), Gaps = 22/259 (8%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
+ L+ DE+ Q E IP+Q + +L GD QLP V+S + + G SL E+L
Sbjct: 347 FDTLIFDESGQTMEPMCWIPIQ--KVKKVILAGDHLQLPPTVKSDEAAKKGLAISLLEKL 404
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFI 710
L +L IQYRM+ I FP+ FY N++ +VK +++ + FI
Sbjct: 405 MPLPGISEMLAIQYRMNEKIMQFPSQWFYDNKLEAHGSVKDHAFDDDVI--------QFI 456
Query: 711 NIIG-GREDFIYHS---CRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
+ G G E+ + + RN E V+ IL + + ++ SIG++SPY Q+ I
Sbjct: 457 DTAGTGYEEELVGAPFGIRNKQEADLVLAILNNVAEL----NKQASIGIISPYKLQIQYI 512
Query: 767 RKKIGFEYENK-DGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALT 825
R+++ E K ++V+++DGFQG E+DIIIIS VR N IGF+ +R+NVA+T
Sbjct: 513 REQL---IEQKITSKNIQVQTVDGFQGQEKDIIIISLVRSNGKQEIGFLKDLRRMNVAIT 569
Query: 826 RARHCLWILGSERTLISSE 844
RAR L ++G TL SS+
Sbjct: 570 RARKKLIVIGDSSTLSSSK 588
Score = 46.2 bits (108), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 280 VELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAI---TE-LASRVLKLVK 331
V +I GPPGTGKT T+ ++ TL+ R L C +N A+ TE LA+R L +V+
Sbjct: 185 VAIIHGPPGTGKTTTIVEIVKTLIEKGERVLVCASSNAAVDVLTERLAARGLPVVR 240
>gi|378756061|gb|EHY66086.1| hypothetical protein NERG_00782 [Nematocida sp. 1 ERTm2]
Length = 1370
Score = 135 bits (339), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 160/307 (52%), Gaps = 44/307 (14%)
Query: 569 RASLFFST---ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDE 625
RA L F T A SS S P + L+IDEA Q E + IPL+ A +L+GD
Sbjct: 1094 RAQLVFCTLSMAGSSVFNQS----PFDVLIIDEACQATEPSTLIPLRTAP-TRIILVGDP 1148
Query: 626 CQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILD 685
QLP + IS +LFERL S + + LL+ QYRM+ IS F ++QFY N++ D
Sbjct: 1149 MQLPPTI---ISQSKDLSVTLFERL-SESITPILLDTQYRMNSIISKFASMQFYENRLRD 1204
Query: 686 GANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWV 745
G +++S+ ++FI+ G E+ N E++ +++ KA+
Sbjct: 1205 GVSLESEL------------PFAFID-ASGTEETEGKDIFNRKEINVILQFSSMAAKAY- 1250
Query: 746 GSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC 805
++G++SPY QV ++K I + + ++DGFQG E+D IIISTVR
Sbjct: 1251 -----DTVGIISPYKGQVGQLKKVIK---------GMDISTVDGFQGQEKDCIIISTVRS 1296
Query: 806 NTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADE 865
IGF++ +R+NVALTRAR+ + I+GS +L+ + W +L+ + + A E
Sbjct: 1297 K---KIGFLNDIRRMNVALTRARYTVIIVGS-MSLLQQDPTWKSLIKYVQENNFVYKAGE 1352
Query: 866 ERNLAKA 872
++ K+
Sbjct: 1353 VYSILKS 1359
Score = 59.7 bits (143), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 10/101 (9%)
Query: 252 SFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLA 311
+F LN+SQ A+ L++ + LI GPPGTGKTKTVS ++ L CR L
Sbjct: 919 AFYDQLNKSQQVAVSTALKK-------NITLIQGPPGTGKTKTVSSMIAYFLLQNCRVLV 971
Query: 312 CTPTNVAITEL--ASRVLKLVKE-SYKRDSRSNTPICPLGD 349
C P+N A+ L + + K + + + R S S IC GD
Sbjct: 972 CAPSNAAVDMLVESGSIWKTIPDCKWIRISISGNRICDEGD 1012
>gi|281344043|gb|EFB19627.1| hypothetical protein PANDA_015630 [Ailuropoda melanoleuca]
Length = 926
Score = 135 bits (339), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 143/268 (53%), Gaps = 14/268 (5%)
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVE-SKISDEAGFGRSLFERLT 651
+V+DE +Q+ E S +P+ +L+GD QLP ++ S + E G ++LF+RL
Sbjct: 627 IVVLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLC 686
Query: 652 SLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
+ H LL QYR HP+IS N FY +++G + +S ++L T F N
Sbjct: 687 LMGHKPVLLRTQYRCHPAISAISNDLFYEGNLMNGISETERSPLLEWLP-----TLCFYN 741
Query: 712 IIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
+ G + +S N+ E + +K++Q L + + IGV++ Y +Q+ + +G
Sbjct: 742 VKGLEQIERDNSFHNVAEAAFTLKLIQSLIASGIAG---CMIGVITLYKSQMYKLCHLLG 798
Query: 772 -FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
++++ D V+V ++D FQG E++III+S VR +GFI +R+NVALTR R
Sbjct: 799 AVDFDHPDIKAVQVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRGRRH 855
Query: 831 LWILGSERTLISSESIWGALVCDAKARQ 858
L I+G+ L +WG ++ + R+
Sbjct: 856 LLIVGNLACL-RKNRLWGRVIQHCEGRE 882
>gi|448678425|ref|ZP_21689432.1| DNA-binding protein-like protein [Haloarcula argentinensis DSM
12282]
gi|445772412|gb|EMA23457.1| DNA-binding protein-like protein [Haloarcula argentinensis DSM
12282]
Length = 741
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 154/304 (50%), Gaps = 32/304 (10%)
Query: 547 SLDELNLPCTTSKLVLEDF--CFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKE 604
+LD +N + + +V + RA + T +S+ L + + +V+DEA Q
Sbjct: 425 TLDRVNASQSANGVVRRAYSDVPGRADVVAVTNNSAATL----AREFDLVVLDEATQSTC 480
Query: 605 SESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS----LNHSKHLL 660
+ S IPL A + AVL GD QLP S E+ +G SLFE L + + L
Sbjct: 481 AASCIPLVRA--DRAVLAGDHRQLPPYSASDEPPESSYGHSLFEHLYADGGVYDGVGLQL 538
Query: 661 NIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFI 720
QYRMH +I+ FPN +FY + +G V ++ + G +GGR + +
Sbjct: 539 QTQYRMHRNIAYFPNRRFYDRTLRNGRAVDPLP-DRPAIEGYN---------VGGRVETV 588
Query: 721 YHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGF 780
HS N E V ++Q L A V +++ IGV++PY+AQV IR+ + + D
Sbjct: 589 GHSKANPTEARLVAHLVQDLL-ADVPAEE---IGVITPYSAQVSRIRETLAKRTDAGD-- 642
Query: 781 TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISK----PQRVNVALTRARHCLWILGS 836
V V +ID FQGGE I++S VR N G++GF+ + P+R+NVALTRA+ I+
Sbjct: 643 RVTVDTIDSFQGGERTAIVLSLVRSNAAGNVGFLGRPVDGPRRLNVALTRAKRYCAIVAD 702
Query: 837 ERTL 840
TL
Sbjct: 703 WHTL 706
>gi|268569138|ref|XP_002640442.1| C. briggsae CBR-SMG-2 protein [Caenorhabditis briggsae]
Length = 1051
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 153/310 (49%), Gaps = 12/310 (3%)
Query: 559 KLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINH 618
K V E A + T SS+ +I+ L IDE+ Q E E + + + G+
Sbjct: 568 KRVKEHELLAAADVICCTCSSAADARLSKIRTRTVL-IDESTQATEPEILVSI-VRGVRQ 625
Query: 619 AVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQF 678
VL+GD CQL +V K + AG +SLFERL L L +QYRMHP +S FP+ F
Sbjct: 626 LVLVGDHCQLGPVVICKKAAIAGLSQSLFERLVLLGIRPFRLQVQYRMHPVLSEFPSNAF 685
Query: 679 YRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYH--SCRNIVEVSAVIKI 736
Y + +G + + + +F G E+ S N E + V K+
Sbjct: 686 YDGSLQNGVTENERQMKGIDWSWPTPSKPAFFWHCSGAEELSASGTSFLNRTEAANVEKL 745
Query: 737 LQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRKKIGFEYENKDGFTVKVKSIDGFQGG 793
+ KL K V +Q IGV++PY Q +V + G +K V++ S+D FQG
Sbjct: 746 VSKLIKGGVEPRQ---IGVITPYEGQRSFIVNYMQTQG-TLNSKLYEGVEIASVDAFQGR 801
Query: 794 EEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCD 853
E+D II++ VR N IGF+S P+R+NVA+TRA++ + ++G+ + L S +W L+
Sbjct: 802 EKDYIIVTCVRSNDILGIGFLSDPRRLNVAITRAKYGIVVVGNAKVL-SRHELWYELINH 860
Query: 854 AKARQCFFNA 863
K + +
Sbjct: 861 YKKKDMLYEG 870
Score = 45.8 bits (107), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL-RIKCRTLACTPT 315
LN SQ A+ L R + LI GPPGTGKT + ++ L+ + + L C+P+
Sbjct: 441 LNSSQSQAVKQVLTR-------PLSLIQGPPGTGKTVVSATIVYHLVQKTEGNVLVCSPS 493
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N+A+ LA ++ LK+V+ + S T +
Sbjct: 494 NIAVDHLAEKIHKTGLKVVRLCARSREHSETTV 526
>gi|323454972|gb|EGB10841.1| hypothetical protein AURANDRAFT_22049 [Aureococcus anophagefferens]
Length = 1026
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 161/336 (47%), Gaps = 28/336 (8%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E ES IP+ L G VL+GD QL ++ K + +AG +SL+ERL +L
Sbjct: 575 VLIDEATQATEPESLIPIVL-GAKQLVLVGDHQQLGPVIMCKGAAKAGLTQSLYERLVAL 633
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQ--YLTGTEFGTYSFIN 711
L +QYR HP +S FP+ FY + +G + + E + + F
Sbjct: 634 GIRPIRLQVQYRSHPCLSEFPSAMFYEGTLQNGVSEGERDLEGEPRFPWPNPEAPMMFYV 693
Query: 712 IIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ-------- 762
G E S N E +++ +++ K + Q IGV++PY Q
Sbjct: 694 CAGAEEMSASGTSFLNRSEAASIERLVTHYLKLGLDPDQ---IGVITPYEGQRAYVVHHM 750
Query: 763 --VVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRV 820
A+R + YE V+V S+D FQG E+D+II+S VR N IGF++ P+R+
Sbjct: 751 ASAGALRADV---YER-----VEVASVDSFQGREKDVIILSCVRSNEHQGIGFLNDPRRL 802
Query: 821 NVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK-E 879
NVALTRA++ L ILG+ R L + +++W L+ K C NL + L + K
Sbjct: 803 NVALTRAKYGLVILGAARVL-AQDALWHELLTHFKKLGCVAEG-PLGNLKVSSLALPKPR 860
Query: 880 LVEIGAESLTSTSQGGKKEEFEFEFVKAFRSINLIH 915
GAE + + E F +A R + H
Sbjct: 861 RGGAGAEHRLRRTALAGRGGAEGHFARAARDHDRSH 896
>gi|297685576|ref|XP_002820362.1| PREDICTED: probable helicase senataxin [Pongo abelii]
Length = 2678
Score = 134 bits (338), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 150/282 (53%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 2175 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2233
Query: 650 LTSL--NHSKH---------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L + +H L +QYRMHP I LFP+ Y N+K+ +
Sbjct: 2234 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVY------NRNLKTNRQTEAI 2287
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
++ F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 2288 RCSSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGII 2346
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR N+ GSIGF++
Sbjct: 2347 THYKAQKTMIQKDLDKEFDRKG--PAEVDTVDAFQGRQKDCVIVTCVRANSVQGSIGFLA 2404
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 2405 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 2445
Score = 47.0 bits (110), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1961 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2020
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K P+ GDI L
Sbjct: 2021 IILEFKEKCK---DKKNPLGNCGDINL 2044
>gi|354502821|ref|XP_003513480.1| PREDICTED: probable helicase senataxin [Cricetulus griseus]
Length = 2635
Score = 134 bits (338), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 150/282 (53%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 2140 PFSCVIVDEAGQSCEVETLSPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2198
Query: 650 LTSL---NHSKHL--------LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L N +++ L IQYRMHP I LFP+ Y N+K+ +
Sbjct: 2199 FCKLLEENVEQNMIGRLPILQLTIQYRMHPDICLFPSNYVY------NKNLKTNRMTETI 2252
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
+E F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 2253 RCSSEWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKDKRKDISSRNIGII 2311
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D II++ VR + GSIGF++
Sbjct: 2312 THYKAQKTMIQKDLEKEFDKKG--PAEVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLA 2369
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 2370 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WYELIQDAQKR 2410
Score = 46.6 bits (109), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1926 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENFNAKIKQNRVLVCAPSNAAVDELMKK 1985
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K P+ GDI L
Sbjct: 1986 IILEFKEKCK---DKKNPLGNCGDINL 2009
>gi|247494016|ref|NP_932114.2| uncharacterized protein C4orf21 homolog [Mus musculus]
Length = 1863
Score = 134 bits (338), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 142/267 (53%), Gaps = 14/267 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVE-SKISDEAGFGRSLFERLTS 652
+V+DE +Q+ E S +P+ +L+GD QLP ++ S + E G ++LF+RL
Sbjct: 1567 VVLDECSQMTEPASLLPIARFQCEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCL 1626
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ H LL QYR HP+IS N FY +++G + + +S ++L T F N+
Sbjct: 1627 MGHKPVLLRTQYRCHPAISAIANDLFYEGSLVNGISERERSPVLEWLP-----TLCFYNV 1681
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI-G 771
G + +S N+ E + +K++Q L + V S IGV++ Y +Q+ I +
Sbjct: 1682 TGAEQVERENSFVNVAEATFTLKLIQSLMASGVES---CMIGVITLYKSQMYKICNLLSA 1738
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
+ + D V+V ++D FQG E++I I+S VR +GFI +R+NVALTR R L
Sbjct: 1739 VDVGHPDVKAVQVSTVDAFQGAEKEITILSCVRTR---QVGFIDSEKRMNVALTRGRRHL 1795
Query: 832 WILGSERTLISSESIWGALVCDAKARQ 858
I+GS + + +WG ++ + R+
Sbjct: 1796 LIVGS-LSCLRKNRLWGRVIQHCEGRE 1821
>gi|34327966|dbj|BAA31600.2| KIAA0625 protein [Homo sapiens]
Length = 2663
Score = 134 bits (338), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 150/282 (53%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 2160 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2218
Query: 650 LTSL--NHSKH---------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L + +H L +QYRMHP I LFP+ Y N+K+ +
Sbjct: 2219 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVY------NRNLKTNRQTEAI 2272
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
++ F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 2273 RCSSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGII 2331
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR N+ GSIGF++
Sbjct: 2332 THYKAQKTMIQKDLDKEFDRKG--PAEVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLA 2389
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 2390 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 2430
Score = 47.0 bits (110), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 52/115 (45%), Gaps = 23/115 (20%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1946 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2005
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYL----NYRIKK 376
++ KE K P+ GDI L +N + L N+R+KK
Sbjct: 2006 IILEFKEKCK---DKKNPLGNCGDINLVRLGPEKSINSEVLKFSLDSQVNHRMKK 2057
>gi|38195410|gb|AAR13367.1| ataxia/oculomotor apraxia protein 2 [Homo sapiens]
Length = 2677
Score = 134 bits (338), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 150/282 (53%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 2174 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2232
Query: 650 LTSL--NHSKH---------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L + +H L +QYRMHP I LFP+ Y N+K+ +
Sbjct: 2233 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVY------NRNLKTNRQTEAI 2286
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
++ F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 2287 RCSSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGII 2345
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR N+ GSIGF++
Sbjct: 2346 THYKAQKTMIQKDLDKEFDRKG--PAEVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLA 2403
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 2404 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 2444
Score = 47.0 bits (110), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 52/115 (45%), Gaps = 23/115 (20%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1960 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2019
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYL----NYRIKK 376
++ KE K P+ GDI L +N + L N+R+KK
Sbjct: 2020 IILEFKEKCK---DKKNPLGNCGDINLVRLGPEKSINSEVLKFSLDSQVNHRMKK 2071
>gi|31874607|emb|CAD98045.1| hypothetical protein [Homo sapiens]
Length = 2677
Score = 134 bits (338), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 150/282 (53%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 2174 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2232
Query: 650 LTSL--NHSKH---------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L + +H L +QYRMHP I LFP+ Y N+K+ +
Sbjct: 2233 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVY------NRNLKTNRQTEAI 2286
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
++ F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 2287 RCSSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGII 2345
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR N+ GSIGF++
Sbjct: 2346 THYKAQKTMIQKDLDKEFDRKG--PAEVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLA 2403
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 2404 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 2444
Score = 47.0 bits (110), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 52/115 (45%), Gaps = 23/115 (20%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1960 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2019
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYL----NYRIKK 376
++ KE K P+ GDI L +N + L N+R+KK
Sbjct: 2020 IILEFKEKCK---DKKNPLGNCGDINLVRLGPEKSINSEVLKFSLDSQVNHRMKK 2071
>gi|187951665|gb|AAI37351.1| Senataxin [Homo sapiens]
Length = 2677
Score = 134 bits (338), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 150/282 (53%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 2174 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2232
Query: 650 LTSL--NHSKH---------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L + +H L +QYRMHP I LFP+ Y N+K+ +
Sbjct: 2233 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVY------NRNLKTNRQTEAI 2286
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
++ F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 2287 RCSSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGII 2345
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR N+ GSIGF++
Sbjct: 2346 THYKAQKTMIQKDLDKEFDRKG--PAEVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLA 2403
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 2404 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 2444
Score = 47.0 bits (110), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 52/115 (45%), Gaps = 23/115 (20%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1960 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2019
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYL----NYRIKK 376
++ KE K P+ GDI L +N + L N+R+KK
Sbjct: 2020 IILEFKEKCK---DKKNPLGNCGDINLVRLGPEKSINSEVLKFSLDSQVNHRMKK 2071
>gi|336254075|ref|YP_004597182.1| AAA ATPase [Halopiger xanaduensis SH-6]
gi|335338064|gb|AEH37303.1| AAA ATPase [Halopiger xanaduensis SH-6]
Length = 762
Score = 134 bits (338), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 145/285 (50%), Gaps = 25/285 (8%)
Query: 566 CFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDE 625
C RA + +T SS+ L + + LV+DEA Q + S IPL A +L GD
Sbjct: 454 CDGRADVVAATNSSAAALE----REFDVLVLDEATQATCTASCIPLSRA--EKVILAGDH 507
Query: 626 CQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQ----YRMHPSISLFPNLQFYRN 681
QLP ++ E+ G SLFE L + + +Q YRMH ++ FPN +FY
Sbjct: 508 KQLPPFSATEEPPESAAGLSLFEHLYADGGVYEGVGVQLRTQYRMHRDVAWFPNRRFYDR 567
Query: 682 QILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLY 741
+ G +V + + ++ L G + +GG E+ + S +N E V ++ +L
Sbjct: 568 ALRQGRDVDALA-DRPALVGYD---------VGGSEETVDRSTKNEAEARLVAHLVSELL 617
Query: 742 KAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIIS 801
+ + + V++PYTAQV AIR + E++ G V V +ID FQG E+ I++S
Sbjct: 618 EDED-DLEPSDVSVITPYTAQVDAIRGTLRRHLEHERGRAVTVDTIDSFQGSEKTAIVLS 676
Query: 802 TVRCNTGGSIGFISK----PQRVNVALTRARHCLWILGSERTLIS 842
VR N G IGF+ + P+R+NVA+TRA+ I+G TL S
Sbjct: 677 LVRSNADGEIGFLGRPLDGPRRLNVAMTRAQRYCAIVGDWYTLRS 721
>gi|168273052|dbj|BAG10365.1| senataxin [synthetic construct]
Length = 2677
Score = 134 bits (338), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 150/282 (53%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 2174 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2232
Query: 650 LTSL--NHSKH---------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L + +H L +QYRMHP I LFP+ Y N+K+ +
Sbjct: 2233 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVY------NRNLKTNRQTEAI 2286
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
++ F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 2287 RCSSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGII 2345
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR N+ GSIGF++
Sbjct: 2346 THYKAQKTMIQKDLDKEFDRKG--PAEVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLA 2403
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 2404 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 2444
Score = 47.0 bits (110), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 52/115 (45%), Gaps = 23/115 (20%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1960 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2019
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYL----NYRIKK 376
++ KE K P+ GDI L +N + L N+R+KK
Sbjct: 2020 IILEFKEKCK---DKKNPLGNCGDINLVRLGPEKSINSEVLKFSLDSQVNHRMKK 2071
>gi|113722133|ref|NP_055861.3| probable helicase senataxin [Homo sapiens]
gi|296453021|sp|Q7Z333.4|SETX_HUMAN RecName: Full=Probable helicase senataxin; AltName: Full=Amyotrophic
lateral sclerosis 4 protein; AltName: Full=SEN1 homolog
Length = 2677
Score = 134 bits (338), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 150/282 (53%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 2174 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2232
Query: 650 LTSL--NHSKH---------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L + +H L +QYRMHP I LFP+ Y N+K+ +
Sbjct: 2233 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVY------NRNLKTNRQTEAI 2286
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
++ F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 2287 RCSSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGII 2345
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR N+ GSIGF++
Sbjct: 2346 THYKAQKTMIQKDLDKEFDRKG--PAEVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLA 2403
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 2404 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 2444
Score = 47.0 bits (110), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 52/115 (45%), Gaps = 23/115 (20%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1960 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2019
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYL----NYRIKK 376
++ KE K P+ GDI L +N + L N+R+KK
Sbjct: 2020 IILEFKEKCK---DKKNPLGNCGDINLVRLGPEKSINSEVLKFSLDSQVNHRMKK 2071
>gi|359405877|ref|ZP_09198604.1| putative DNA helicase [Prevotella stercorea DSM 18206]
gi|357557227|gb|EHJ38779.1| putative DNA helicase [Prevotella stercorea DSM 18206]
Length = 622
Score = 134 bits (338), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 175/357 (49%), Gaps = 30/357 (8%)
Query: 498 DNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNS-LDELNLPCT 556
D ++S E+ F D W+ + L+ +RRS+ W+ +D L T
Sbjct: 267 DKMLSFTYERRFEAHPDYPQLWSIRKAIRELRGERRRSDA-------WHQKMDRLKSRAT 319
Query: 557 TSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGI 616
+L + F A + T + + +E + + L IDEAAQ E+ I ++ AG
Sbjct: 320 EIELRIRASLFGEARVIACTLTGAAN-RVLEGEKFSTLFIDEAAQALEAACWIAIRRAG- 377
Query: 617 NHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSK-HLLNIQYRMHPSISLFPN 675
+ GD CQLP V+S ++ + G G +L ER+ LL +QYRM+ I F +
Sbjct: 378 -RVIFAGDHCQLPPTVKSIMALKGGLGITLMERIVKAKPDVVTLLKVQYRMNEQIMRFSS 436
Query: 676 LQFYRNQILDGANVKSKS---YEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNI--VEV 730
FY ++ ++ +S Y++ + + + G+E+F+ + I E
Sbjct: 437 DWFYGGEVQTAPGIERRSILDYDRPMM-------WVDTSEAEGKEEFVGENFGRINRTEA 489
Query: 731 SAVIKILQKLYKAWVGSK----QKVSIGVVSPYTAQVVAIRKKI-GFEYENKDGFTVKVK 785
++ LQ+ ++ +G + + + +G++SPY AQV + K I E+ + V
Sbjct: 490 ELTLQTLQQYFEK-IGKQRILDEHIDVGIISPYRAQVQLLHKMIRQSEFFRPYRRAISVN 548
Query: 786 SIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLIS 842
++DGFQG E DII+IS VR N G IGF+ +R+NVA+TRAR L ILGS T+ +
Sbjct: 549 TVDGFQGQERDIIVISLVRNNDGKEIGFLRDLRRMNVAITRARMKLIILGSAATMTA 605
Score = 46.2 bits (108), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Query: 249 FGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCR 308
FG LN SQ A+ LR D V ++ GPPGTGKT T+ + LR + +
Sbjct: 178 FGAMSLPWLNASQQQAVNEVLRAKD------VAVVHGPPGTGKTTTLVEAIYETLRRESQ 231
Query: 309 TLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEI 368
L C +N+A+ +A KLV R P +L F + R + +P + ++
Sbjct: 232 VLVCAQSNMAVDWIAE---KLVDRGVN-VLRIGNPTRVNDKMLSFTYERRFEAHPDYPQL 287
Query: 369 Y-LNYRIKKLR 378
+ + I++LR
Sbjct: 288 WSIRKAIRELR 298
>gi|294929939|ref|XP_002779430.1| nonsense-mediated mRNA decay protein, putative [Perkinsus marinus
ATCC 50983]
gi|239888538|gb|EER11225.1| nonsense-mediated mRNA decay protein, putative [Perkinsus marinus
ATCC 50983]
Length = 923
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 140/263 (53%), Gaps = 18/263 (6%)
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS 652
+++DEA Q E E+ IP+ G +L+GD QL +V K + +AGF +SLFERL +
Sbjct: 623 MVLVDEATQACEPEALIPI-CNGAKQVILVGDHKQLGPVVMCKKAAKAGFKQSLFERLIA 681
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFG------T 706
L L +QYRMHPS++ FP+ FY DG + E + ++G +F
Sbjct: 682 LGVRPIRLEVQYRMHPSLAEFPSQTFY-----DGCLQNGITMEDRQVSGVKFPWPREEMP 736
Query: 707 YSFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVA 765
F N G E S N E + KI+ +A + Q IGVV+PY Q
Sbjct: 737 MFFYNSTGQEEISASGTSYLNRSEAINIEKIITYFLRAGLKGSQ---IGVVTPYEGQRAY 793
Query: 766 IRKKIGFE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
I++ + + K ++++ S+D FQG E+D I++S VR N +GF++ P+R+NVA
Sbjct: 794 IQQVLQRQTTLSAKMYESIEIASVDAFQGREKDFIVLSCVRSNQRAGLGFLNDPRRLNVA 853
Query: 824 LTRARHCLWILGSERTLISSESI 846
LTRAR+ L I G+ + L + ++
Sbjct: 854 LTRARYGLVICGNAQVLARATTV 876
Score = 44.7 bits (104), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 12/80 (15%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACTPT 315
LN SQV A+ L + + LI GPPGTGKT T + ++ L R + + L P+
Sbjct: 460 LNHSQVQAVQKALEQ-------PLSLIQGPPGTGKTVTSATIIYHLARQHQGQVLVTAPS 512
Query: 316 NVAITELASRV----LKLVK 331
N+A+ +LA ++ LK+V+
Sbjct: 513 NIAVDQLAEKIHLTGLKVVR 532
>gi|167384498|ref|XP_001736978.1| nonsense-mediated mRNA decay protein [Entamoeba dispar SAW760]
gi|165900437|gb|EDR26756.1| nonsense-mediated mRNA decay protein, putative [Entamoeba dispar
SAW760]
Length = 937
Score = 134 bits (337), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 134/262 (51%), Gaps = 7/262 (2%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
++ ++IDE+ Q E E I L + L+GD CQL ++ S + + G G +F RL
Sbjct: 566 IDTVLIDESTQADEPECLICLN-NSVKQLFLVGDHCQLGPILNSSRAKKNGLGLPMFSRL 624
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK-QYLTGTEFGTYSF 709
L H + L QYRMHP +S F + FY + +G + + +Y + F
Sbjct: 625 LQLGHEPYRLQFQYRMHPCLSEFSSQTFYDGVLQNGVTALERQFPSLKYFWFKQNKPMMF 684
Query: 710 INIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKK 769
I G+E + + + + I I Q + K V IGV++PY AQ AI +
Sbjct: 685 I-AANGKESYGSNGTSYLNDEEVFI-IEQIIIKMLVNKVDPSQIGVITPYIAQKQAIISR 742
Query: 770 IGFEYENKDG--FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+ + +++ S+D FQG E+D II STVR N IGF+S PQR+NV++TRA
Sbjct: 743 LSLNRRVSEAQLNDIEIASVDSFQGREKDFIIFSTVRSNEISDIGFLSIPQRLNVSITRA 802
Query: 828 RHCLWILGSERTLISSESIWGA 849
++ L ++G+ TL+ + +W A
Sbjct: 803 KYGLVVVGNPETLMQN-PLWCA 823
>gi|254578954|ref|XP_002495463.1| ZYRO0B11968p [Zygosaccharomyces rouxii]
gi|238938353|emb|CAR26530.1| ZYRO0B11968p [Zygosaccharomyces rouxii]
Length = 1101
Score = 134 bits (337), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 174/368 (47%), Gaps = 60/368 (16%)
Query: 533 RRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLN 592
R + V +N +N+L +T++ + D +A + F+T ++ IK L
Sbjct: 749 RTGKSHEVSKNQYNNL-------STAQNQIADRYIMQAQILFTTTITAGGRRLKAIKELP 801
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER--L 650
+++DE+ Q E+ + +PL L GI V +GDE QL S S SLFER L
Sbjct: 802 VVIMDESTQSSEAATLVPLSLPGIRKFVFVGDEKQL-----SSFSQIPQLEMSLFERVLL 856
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYE----KQYLTGTEFGT 706
+ H+L+ QYRMHP IS FP +FY + DG + K+++ + + G
Sbjct: 857 NGCYKNPHMLDTQYRMHPIISEFPRQRFYGGLLKDGVTEEQKNWQSIKYPLFFLRCDLGD 916
Query: 707 YSFI-NIIGGREDFIY---HSCRNIVEVSAVIKILQKLYKAWVGSK-QKVSIGVVSPYTA 761
+ + N G + Y H C+ +LQ +YK + + + IG+V+PY+A
Sbjct: 917 ETKVTNSHNGLRGYTYTNKHECQ---------LLLQMVYKLILDKQVSRDQIGIVTPYSA 967
Query: 762 QVVAIRK-------------KIGFEYENKDGFT---------------VKVKSIDGFQGG 793
Q AI + + E + D F + + ++D FQG
Sbjct: 968 QRDAISELLVQDRIVNPQGLAMEQEIDEMDPFDAMAGSKKNSINIVNDIYIATVDSFQGH 1027
Query: 794 EEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCD 853
E++ I+ STVR N G IGF++ +R+NVALTRA++ L ++G++ TL + +W +
Sbjct: 1028 EKNFILFSTVRNNPLGKIGFVNDARRMNVALTRAKNGLILVGNDHTLRNGSDLWKDYIDY 1087
Query: 854 AKARQCFF 861
+RQ F
Sbjct: 1088 LNSRQLIF 1095
Score = 43.1 bits (100), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 30/139 (21%)
Query: 256 TLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLR--IKCRTLACT 313
+ NESQ A+ L + V ++ GPPGTGKT T+ L++ ++R L
Sbjct: 632 SFNESQKSAIQHVLN-------NSVTVLQGPPGTGKTSTIEELIIQMIRNFSSWPILCVA 684
Query: 314 PTNVAITELAS---------RVLKLVKES----YKRDSRSNTPICPLGDILLFGNKDRLK 360
+N+AI +A R+L++V +S Y +D PLG I L N +
Sbjct: 685 ASNIAIDNIAEKFIDNKDSIRILRIVSDSKESQYNKDH-------PLGKICLH-NIVNDQ 736
Query: 361 VNPGFEEIYLNYRIKKLRE 379
+ P +E+ R K E
Sbjct: 737 LPPQLKEVQHKLRTGKSHE 755
>gi|301781242|ref|XP_002926037.1| PREDICTED: hypothetical protein LOC100466860 [Ailuropoda melanoleuca]
Length = 2294
Score = 134 bits (337), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 143/268 (53%), Gaps = 14/268 (5%)
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVE-SKISDEAGFGRSLFERLT 651
+V+DE +Q+ E S +P+ +L+GD QLP ++ S + E G ++LF+RL
Sbjct: 1836 IVVLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLC 1895
Query: 652 SLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
+ H LL QYR HP+IS N FY +++G + +S ++L T F N
Sbjct: 1896 LMGHKPVLLRTQYRCHPAISAISNDLFYEGNLMNGISETERSPLLEWLP-----TLCFYN 1950
Query: 712 IIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
+ G + +S N+ E + +K++Q L + + IGV++ Y +Q+ + +G
Sbjct: 1951 VKGLEQIERDNSFHNVAEAAFTLKLIQSLIASGIAG---CMIGVITLYKSQMYKLCHLLG 2007
Query: 772 -FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
++++ D V+V ++D FQG E++III+S VR +GFI +R+NVALTR R
Sbjct: 2008 AVDFDHPDIKAVQVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRGRRH 2064
Query: 831 LWILGSERTLISSESIWGALVCDAKARQ 858
L I+G+ + +WG ++ + R+
Sbjct: 2065 LLIVGN-LACLRKNRLWGRVIQHCEGRE 2091
>gi|335281152|ref|XP_003353743.1| PREDICTED: probable helicase senataxin [Sus scrofa]
Length = 2661
Score = 134 bits (337), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 150/282 (53%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N VL+GD QLP V S + + G+ +S+ R
Sbjct: 2168 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLVLVGDPKQLPPTVISMKAQDYGYDQSMMAR 2226
Query: 650 LTSL--NHSKH---------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L + +H L +QYRMHP I LFP+ Y N+K+ S +
Sbjct: 2227 FYKLLEENVEHNVIGRLPILQLTVQYRMHPDICLFPSNYIYNR------NLKTNSLTEAS 2280
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
++ F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 2281 RCSSDWPFQPYLVFDVGDGSERRDNDSYVNVQEIKLVMEII-KLIKDKRRDVTFRNIGII 2339
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG-GSIGFIS 815
+ Y AQ I+K + E++ K +V ++DGFQG ++D +I++ VR T GSIGF++
Sbjct: 2340 THYKAQKTLIQKDLDKEFDRKG--PAEVDTVDGFQGRQKDCVIVTCVRAKTSQGSIGFLA 2397
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL ++ W L+ DA+ R
Sbjct: 2398 SLQRLNVTITRAKYSLFILGHLRTLRENDH-WNQLIEDAQKR 2438
Score = 48.1 bits (113), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 45/87 (51%), Gaps = 19/87 (21%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1954 LIHGPPGTGKSKTIVGLLYRLLTENQRRGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2013
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K D R+ P+ GDI L
Sbjct: 2014 IILEFKEKCK-DKRN--PLGNCGDINL 2037
>gi|344211383|ref|YP_004795703.1| putative DNA helicase [Haloarcula hispanica ATCC 33960]
gi|343782738|gb|AEM56715.1| DNA binding protein-like / putative DNA helicase (enhancer-binding
protein-like protein) [Haloarcula hispanica ATCC 33960]
Length = 741
Score = 134 bits (336), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 150/298 (50%), Gaps = 33/298 (11%)
Query: 547 SLDELNLPCTTSKLVLEDF--CFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKE 604
+LD +N +++ +V + RA + T +S+ L + + +V+DEA Q
Sbjct: 425 TLDRVNAGQSSNGVVRRAYGDVPGRADVVAVTNNSAATL----AREFDLVVLDEATQSTC 480
Query: 605 SESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS----LNHSKHLL 660
+ S IPL A + AVL GD QLP S + +G SLFE L + + L
Sbjct: 481 AASCIPLVRA--DRAVLAGDHRQLPPYSASDEPPASSYGHSLFEHLYADGGVYDGVGLQL 538
Query: 661 NIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFI 720
QYRMH I+ FPN +FY + +G V S ++ + G +GGR + +
Sbjct: 539 QTQYRMHRDIAYFPNRRFYDRTLRNGRAVNPLS-DRPAIEGYN---------VGGRVETV 588
Query: 721 YHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGF 780
HS N E V ++Q L + IGV++PY+AQV IR+ + + DG
Sbjct: 589 GHSRTNPTEARLVAHLVQDL----LSDVPAEEIGVITPYSAQVSKIREILTERTDAADGV 644
Query: 781 TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISK----PQRVNVALTRA-RHCLWI 833
TV +ID FQGGE I++S VR N G++GF+ + P+R+NVALTRA R+C +
Sbjct: 645 TVD--TIDSFQGGERTAIVLSLVRSNADGNVGFLGRPVDGPRRLNVALTRAKRYCAVV 700
>gi|448736335|ref|ZP_21718469.1| Superfamily I DNA and RNA helicase and helicase subunits-like
protein [Halococcus thailandensis JCM 13552]
gi|445806246|gb|EMA56394.1| Superfamily I DNA and RNA helicase and helicase subunits-like
protein [Halococcus thailandensis JCM 13552]
Length = 353
Score = 134 bits (336), Expect = 6e-28, Method: Composition-based stats.
Identities = 107/307 (34%), Positives = 155/307 (50%), Gaps = 35/307 (11%)
Query: 548 LDELNLPCTTSKLVLEDFC--FKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKES 605
L+ N+ + S+LV E++ KRA + ST S+ L + + +VIDEA Q
Sbjct: 32 LNRHNVRRSRSELVQEEYANVRKRADVVASTNGSAASLD----RTFDMVVIDEATQATLP 87
Query: 606 ESTIPLQLAGINHAVLIGDECQLPAMVESK----ISDEAGFGRSLFERLTSLNHSKH--- 658
+ IPL A + AVL GD QLP S+ ++ G G SLFE L + +
Sbjct: 88 STCIPLSKA--DRAVLAGDHRQLPPYSASEEPPEVTLTTGTGFSLFEHLYAEDGVYEGVG 145
Query: 659 -LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRE 717
L+ QYRMH I+ FPN +FY N + G + S + L G + IGG E
Sbjct: 146 VPLHTQYRMHRDIARFPNQRFYDNLLESGRAIDSLD-DYPPLVGYD---------IGGSE 195
Query: 718 DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENK 777
+S N E V ++++ + V + IGV++PYTAQ I+ + + +
Sbjct: 196 TISRNSTANPTEARLVSHLVEEFVNSGV---NPIEIGVITPYTAQKDEIKDVL--DSASV 250
Query: 778 DGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQ----RVNVALTRARHCLWI 833
D +KV +ID FQG E +I+IS VR N G IGF+ +P+ R+NVALTRA+ I
Sbjct: 251 DTGPIKVDTIDAFQGSENSVILISLVRSNPDGRIGFLGRPEDGPRRLNVALTRAQRFCGI 310
Query: 834 LGSERTL 840
+G RTL
Sbjct: 311 IGDWRTL 317
>gi|219129129|ref|XP_002184749.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403858|gb|EEC43808.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 268
Score = 134 bits (336), Expect = 6e-28, Method: Composition-based stats.
Identities = 89/250 (35%), Positives = 130/250 (52%), Gaps = 10/250 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DEA Q E +PL + G VL+GD CQLP V S ++E G G LF R+ +
Sbjct: 24 VLLDEATQATEPAVLVPL-MRGCRQLVLVGDHCQLPPTVLSTRAEEEGHGVPLFSRMVAC 82
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
++L+ QYRMHP I++FP+ FY + +G + + + E +F+ I
Sbjct: 83 GVPPYMLDTQYRMHPCIAMFPSDLFYGGLLRNGVSAPERRPLAGFPWPREEFPVAFLPIQ 142
Query: 714 GGRED---FIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
G D Y+ +AV +LQ G I VV+PY AQ IR+ I
Sbjct: 143 GVEMDDGVSKYNDAEAAAACNAVSLLLQG------GQCSASDIAVVTPYAAQARLIRRMI 196
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
+ ++V S+DGFQG E++ ++ S VR N GSIGF S +RVNV+ TRAR
Sbjct: 197 RRILPDSGPPFIEVASVDGFQGREKEAVVFSAVRSNDYGSIGFTSDWRRVNVSFTRARRA 256
Query: 831 LWILGSERTL 840
L ++G+E TL
Sbjct: 257 LIVIGNEHTL 266
>gi|290992230|ref|XP_002678737.1| sen1 helicase [Naegleria gruberi]
gi|284092351|gb|EFC45993.1| sen1 helicase [Naegleria gruberi]
Length = 1795
Score = 134 bits (336), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 150/329 (45%), Gaps = 74/329 (22%)
Query: 589 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
K + ++IDEAAQ+ ESES IPL LA VLIGD QLP+ V S + E + RS+FE
Sbjct: 987 KAFDIIIIDEAAQVTESESVIPLDLA-TEKLVLIGDPKQLPSTVISNEAVEKNYNRSMFE 1045
Query: 649 RLTSLNHSKH-------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTG 701
RL L ++K LL+ QYRMHP IS FP QFY + + DG NVK ++
Sbjct: 1046 RLMKLANTKGFSIHKPVLLDTQYRMHPKISRFPEHQFYHSVLKDGENVKKYDVHPEWQPV 1105
Query: 702 TEFGTYS--FINIIGGREDF--IYHSCRNIVEVSAVIKILQ----------------KLY 741
E G F+N E F S N E ++KI+ Y
Sbjct: 1106 YELGLEPCLFMNCPKSAETFNPKLKSYNNEEEADTIVKIIDLYMNKYGISRSKIAVITFY 1165
Query: 742 KAWVG----------SKQKVSIGVVSPY-TAQVVAIRKKIGFEYENK-------DGFTVK 783
+A V K + VV+P T QV A+ K+ E + +G + +
Sbjct: 1166 RAQVDLIREKLTEYEKKNPHPVRVVTPVATPQVTAVPKQENPTTEQEKPVENAGEGTSEE 1225
Query: 784 ----------------------------VKSIDGFQGGEEDIIIISTVRCNTGGSIGFIS 815
V ++D +QG E+ +II+STVR N S+GF
Sbjct: 1226 ISIEDLLPIDDSSDSDEEEEIVEEEWFDVNTVDSYQGSEKQVIILSTVRANDRNSLGFCV 1285
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSE 844
+R+NVA+TRA+ L I+G+ L S++
Sbjct: 1286 DQRRLNVAITRAQFSLVIVGNGENLCSND 1314
>gi|448667182|ref|ZP_21685761.1| putative DNA helicase [Haloarcula amylolytica JCM 13557]
gi|445770587|gb|EMA21647.1| putative DNA helicase [Haloarcula amylolytica JCM 13557]
Length = 741
Score = 134 bits (336), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 33/298 (11%)
Query: 547 SLDELNLPCTTSKLVLEDF--CFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKE 604
+LD +N +++ +V + RA + T +S+ L + + +V+DEA Q
Sbjct: 425 TLDRVNAGQSSNGVVRRAYGDVPGRADVVAVTNNSAATL----AREFDLVVLDEATQSTC 480
Query: 605 SESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS----LNHSKHLL 660
+ S IPL A + AVL GD QLP S + +G SLFE L S + L
Sbjct: 481 AASCIPLVRA--DRAVLAGDHRQLPPYSASDEPPASSYGHSLFEHLYSDGGVYDGVGLQL 538
Query: 661 NIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFI 720
QYRMH I+ FPN +FY + +G + + ++ + G +GGR + +
Sbjct: 539 QTQYRMHRDIAYFPNRRFYDRTLRNGRAIDPLA-DRPAIEGYN---------VGGRVETV 588
Query: 721 YHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGF 780
HS N E V ++Q L + IGV++PY+AQV IR+ + ++ D
Sbjct: 589 GHSKSNPTEARLVAHLVQDL----LSDVPAEEIGVITPYSAQVSRIRETLTERTDDAD-- 642
Query: 781 TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISK----PQRVNVALTRA-RHCLWI 833
+V V +ID FQGGE I++S VR N G++GF+ + P+R+NVALTRA R+C +
Sbjct: 643 SVTVDTIDSFQGGERTAIVLSLVRSNAAGNVGFLGRPVDGPRRLNVALTRAKRYCAVV 700
>gi|283779091|ref|YP_003369846.1| AAA ATPase [Pirellula staleyi DSM 6068]
gi|283437544|gb|ADB15986.1| AAA ATPase [Pirellula staleyi DSM 6068]
Length = 639
Score = 134 bits (336), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 133/264 (50%), Gaps = 21/264 (7%)
Query: 586 VEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRS 645
+E + + VIDEAAQ E L A + +L GD QLP + S + G RS
Sbjct: 362 LEDRRFDVAVIDEAAQATEPACWPALLRA--DRVILAGDPFQLPPTIISPEAARGGLARS 419
Query: 646 LFERL--TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK-QYLTGT 702
L ERL TS H L +QYRMH SI F + +FY + +V S +T T
Sbjct: 420 LMERLLETSTTTISHRLAVQYRMHQSIMAFSSAEFYEQGLTADPSVASHLLSDLSEVTPT 479
Query: 703 EFGTYS--FINIIGG----REDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
+ + + FI+ G R S N E V+K+ L A V ++ +I ++
Sbjct: 480 DRTSTALEFIDTAGAGYDERAGSSQESRENPQEAELVVKLALALRDAGVAAE---AIAII 536
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISK 816
SPY AQV +R+ + DG + V +IDGFQG E + +IIS VR N G IGF++
Sbjct: 537 SPYAAQVRLLRRLL-------DGTLIDVDTIDGFQGRESEAVIISLVRSNATGEIGFLAD 589
Query: 817 PQRVNVALTRARHCLWILGSERTL 840
+R+NVA+TRAR L I+G T+
Sbjct: 590 VRRMNVAITRARRKLIIIGDSATI 613
>gi|293345814|ref|XP_002726125.1| PREDICTED: probable helicase senataxin-like [Rattus norvegicus]
Length = 2647
Score = 134 bits (336), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 150/282 (53%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N VL+GD QLP V S + E G+ +S+ R
Sbjct: 2151 PFSCVIVDEAGQSCEVETLSPL-IHRCNKLVLVGDPKQLPPTVISMKAQEYGYDQSMMAR 2209
Query: 650 LTSL---NHSKHL--------LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L N +++ L IQYRMHP I LFP+ Y N+K+ +
Sbjct: 2210 FCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVY------NKNLKTNRLTETI 2263
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
+E F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 2264 RCSSEWPFQPYLVFDVGDGSEQRDNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGII 2322
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D II++ VR + GSIGF++
Sbjct: 2323 THYKAQKTMIQKDLEKEFDKKG--PAEVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLA 2380
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 2381 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WYELIQDAQKR 2421
Score = 46.6 bits (109), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1937 LIHGPPGTGKSKTIVGLLYRLLTESQRKGHSDENFNAKIKQNRVLVCAPSNAAVDELMKK 1996
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K P+ GDI L
Sbjct: 1997 IILEFKEKCK---DKKNPLGNCGDINL 2020
>gi|109467976|ref|XP_342401.3| PREDICTED: probable helicase senataxin-like [Rattus norvegicus]
Length = 2647
Score = 134 bits (336), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 150/282 (53%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N VL+GD QLP V S + E G+ +S+ R
Sbjct: 2151 PFSCVIVDEAGQSCEVETLSPL-IHRCNKLVLVGDPKQLPPTVISMKAQEYGYDQSMMAR 2209
Query: 650 LTSL---NHSKHL--------LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L N +++ L IQYRMHP I LFP+ Y N+K+ +
Sbjct: 2210 FCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVY------NKNLKTNRLTETI 2263
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
+E F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 2264 RCSSEWPFQPYLVFDVGDGSEQRDNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGII 2322
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D II++ VR + GSIGF++
Sbjct: 2323 THYKAQKTMIQKDLEKEFDKKG--PAEVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLA 2380
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 2381 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WYELIQDAQKR 2421
Score = 46.6 bits (109), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1937 LIHGPPGTGKSKTIVGLLYRLLTESQRKGHSDENFNAKIKQNRVLVCAPSNAAVDELMKK 1996
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K P+ GDI L
Sbjct: 1997 IILEFKEKCK---DKKNPLGNCGDINL 2020
>gi|19074775|ref|NP_586281.1| INVOLVED IN mRNA DECAY CONTROL (DNA2/NAM7 HELICASE FAMILY)
[Encephalitozoon cuniculi GB-M1]
gi|449329865|gb|AGE96133.1| mRNA decay control [Encephalitozoon cuniculi]
Length = 782
Score = 134 bits (336), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/261 (35%), Positives = 139/261 (53%), Gaps = 21/261 (8%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E S IPL + G VL+GD QL + K +AGF +SLFERL S+
Sbjct: 499 VLIDEAVQSTEPLSLIPL-VYGCKKLVLVGDHKQLGPTILCKKVAQAGFKQSLFERLISI 557
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
++L++QYRM + +P+ FY ++L G K + +F +
Sbjct: 558 GVVPYMLSVQYRMDADLCEWPSEMFYNGELLTGG--------KNFCRFDLGIPVNFFYVC 609
Query: 714 GGREDFIYHSCRNIVEVSAVI--KILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI- 770
GRE+ + + A+ I++ L+K V Q IGV++PY Q I +I
Sbjct: 610 YGREEVSASGTSFVNQAEALYCESIIRHLFKCGVTESQ---IGVITPYEGQRSYILNRIF 666
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
G E N +++ ++DGFQG E+D II+S VR N IGF+ +R+NV LTRA+H
Sbjct: 667 GAEPGN-----LEISNVDGFQGREKDFIIVSLVRSNLYQGIGFVGDKRRMNVTLTRAKHG 721
Query: 831 LWILGSERTLISSESIWGALV 851
L I+G+ TL+ + +WG L+
Sbjct: 722 LVIIGNPMTLMKHD-MWGNLL 741
Score = 46.6 bits (109), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 243 GQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTL 302
G +D F LN SQ A+ A L R V LI GPPGTGKT S ++ L
Sbjct: 331 GNFDHIFSSPNLPKLNASQEVAVRAALGR-------KVTLIQGPPGTGKTLVSSAIVYNL 383
Query: 303 LR-IKCRTLACTPTNVAITELASRVLK 328
+R + L P+N A+ +L ++ K
Sbjct: 384 VRHYGGKVLVVAPSNTAVDQLTLKIHK 410
>gi|407039213|gb|EKE39508.1| regulator of nonsense transcripts, putative [Entamoeba nuttalli
P19]
Length = 937
Score = 134 bits (336), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 138/264 (52%), Gaps = 11/264 (4%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
++ ++IDE+ Q E E I L + L+GD CQL ++ S + + G G +F RL
Sbjct: 566 IDTVLIDESTQADEPECLICLN-NSVKQLFLVGDHCQLGPILNSPRAKKNGLGLPMFSRL 624
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK-QYLTGTEFGTYSF 709
L H + L QYRMHP +S F + FY + +G + + +Y + F
Sbjct: 625 LQLGHEPYRLQFQYRMHPCLSEFSSQTFYDGVLQNGVTALERQFPSLKYFWFKQNKPMMF 684
Query: 710 INIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
I G+E + + S N EV + +I+ K+ V Q IGV++PY AQ AI
Sbjct: 685 I-AANGKESYGSNGTSYLNDEEVFLIEQIIIKMLGNKVSPSQ---IGVITPYIAQKQAII 740
Query: 768 KKIGFEYENKDG--FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALT 825
++ + +++ S+D FQG E+D II STVR N IGF+S PQR+NV++T
Sbjct: 741 SRLSLNRRISEAQLNDIEIASVDSFQGREKDFIIFSTVRSNEISDIGFLSIPQRLNVSIT 800
Query: 826 RARHCLWILGSERTLISSESIWGA 849
RA++ L ++G+ TL+ + +W A
Sbjct: 801 RAKYGLVVVGNPETLMQN-PLWCA 823
>gi|168060609|ref|XP_001782287.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666217|gb|EDQ52877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1117
Score = 134 bits (336), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 126/237 (53%), Gaps = 15/237 (6%)
Query: 644 RSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKS--YEKQYLTG 701
RSLFER +LN QYRMHPSI L+P+ QFY + D V S + + G
Sbjct: 830 RSLFERFEEGGVPVLVLNTQYRMHPSICLYPSRQFYGGALKDSVRVSSMQSIFTDEVCVG 889
Query: 702 T--------EFGTYSFINIIGG--REDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKV 751
+ G Y F+++ G RE+ + HS N E V +++ + K + S K
Sbjct: 890 GIIIRGCRFKLGHYCFMDVGWGTEREELVGHSRANFEEALVVCNVVESVVKGLI-SGLKP 948
Query: 752 SIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSI 811
++GV++PY AQ I ++ D +V ++DGFQG E+D+I++S VR +
Sbjct: 949 NVGVITPYIAQRGVIEGQLA--RRGIDSTACEVNTVDGFQGREKDVIVLSCVRAMADRGL 1006
Query: 812 GFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERN 868
GF+S +R+NVALTRA++ L ++G TL WG+L+ DA+ R C+ +RN
Sbjct: 1007 GFVSDERRMNVALTRAKYSLIVVGHAETLQKWSPTWGSLIDDAQQRGCYQVLTNKRN 1063
Score = 54.7 bits (130), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 12/102 (11%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL--RIKCRTLACTP 314
LN SQ+ + ++CL + R G +L+ GPPGTGKT T+ ++ +LL R L C P
Sbjct: 624 LNTSQLLS-ISCLLHM----RQGFQLVQGPPGTGKTSTIIGMVSSLLIEEPSVRILVCAP 678
Query: 315 TNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNK 356
+N A+ E+A+R LV + +P+ G I+ FG+K
Sbjct: 679 SNAALDEVAAR---LVNRMLDKSGDFYSPVD--GAIVRFGSK 715
>gi|168057212|ref|XP_001780610.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667976|gb|EDQ54593.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1687
Score = 134 bits (336), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 122/228 (53%), Gaps = 15/228 (6%)
Query: 645 SLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKS--------YEK 696
SLFER H+L QYRMHPSI +P+ QFY + D S E
Sbjct: 878 SLFERFQGAGVPVHMLTTQYRMHPSICCYPSQQFYGGALRDSTRTSSMQSIFRQEVCREG 937
Query: 697 QYLTGTEF--GTYSFINIIGG--REDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS 752
+ G +F G Y F+++ G RE+ + HS N E V +++ + K + S K +
Sbjct: 938 INIRGCKFRLGHYYFMDVGWGIEREEIVGHSRANFEEALVVCNVVEGVVKGLL-SGLKPN 996
Query: 753 IGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIG 812
+GV++PY AQ I ++ E DG +V ++DGFQG E+D+I++S VR +G
Sbjct: 997 LGVITPYIAQRSEIEGQL--ERRGIDGTACEVNTVDGFQGREKDVIVLSCVRAMADRGLG 1054
Query: 813 FISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
F+S +R+NVALTRA+ L I+G TL + WG L+ DA+ R C+
Sbjct: 1055 FVSDERRMNVALTRAKFSLIIVGHAETLQKWSATWGLLIDDARKRGCY 1102
>gi|395844356|ref|XP_003794928.1| PREDICTED: probable helicase senataxin [Otolemur garnettii]
Length = 2681
Score = 134 bits (336), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 148/282 (52%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 2181 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2239
Query: 650 LTSL--NHSKH---------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L + +H L +QYRMHP I LFP+ Y N+K+ +
Sbjct: 2240 FYKLLEENVEHNMIGRLPVLQLTVQYRMHPDICLFPSSYVY------NRNLKTNRQTEAI 2293
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
+ F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 2294 RCSADWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKEKRKDVTFRNIGII 2352
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR N GSIGF++
Sbjct: 2353 THYKAQKTMIQKDLDKEFDRKG--PAEVDTVDAFQGRQKDCVIVTCVRANAMQGSIGFLA 2410
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 2411 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WNYLIQDAQKR 2451
Score = 46.6 bits (109), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1967 LIHGPPGTGKSKTIVGLLYRLLTENQRRGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2026
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K P+ GDI L
Sbjct: 2027 IILEFKEKCK---DKKNPLGNCGDINL 2050
>gi|124511670|ref|XP_001348968.1| erythrocyte membrane-associated antigen [Plasmodium falciparum 3D7]
gi|23498736|emb|CAD50806.1| erythrocyte membrane-associated antigen [Plasmodium falciparum 3D7]
Length = 2283
Score = 134 bits (336), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 142/264 (53%), Gaps = 16/264 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE AQ E + IPL N+ VLIGD QLP + S + + G +SL ER
Sbjct: 1923 VIIDECAQSIEPSNLIPLG-HYCNNLVLIGDHKQLPPTIISPDAIKLGLDKSLLERFVMA 1981
Query: 654 NHSK-HLLNIQYRMHPSISLFPNLQFYRNQILDGANV--KSKSYEKQYLTGTEFGTYSFI 710
+ HLLN Q RMH SI +FPN FY N+ L ANV +++ K +L +FI
Sbjct: 1982 KIAPVHLLNTQRRMHLSICVFPNFHFYDNK-LKTANVTEENRPIIKGFLWPNPKCRLAFI 2040
Query: 711 NIIGGR-----EDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVA 765
++ G+ E+ S N+ E+ +I +L+ + S + IG+++ Y AQ +
Sbjct: 2041 DVSIGKPGSKFENAYGTSKFNLYEIEPLITVLKSIINEGCVSVDE--IGILTAYDAQKMK 2098
Query: 766 IRKKI--GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
++K + F YE +++ SIDGFQG E+D+I+ S VR N +GF+ +R+NV
Sbjct: 2099 LKKAVQDAFSYE--ASHRIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLRDARRLNVM 2156
Query: 824 LTRARHCLWILGSERTLISSESIW 847
LTRA+ + + G + TL + + W
Sbjct: 2157 LTRAKRGVILFGDQFTLANDPANW 2180
>gi|406604174|emb|CCH44397.1| putative ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 1153
Score = 133 bits (335), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 156/316 (49%), Gaps = 52/316 (16%)
Query: 572 LFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAM 631
L S + Y+L + +K L +++DE+ Q E+ S IPL + G++ V +GD+ QL
Sbjct: 837 LTTSVVAGGYQLKN--LKKLPVVIMDESTQSSEATSLIPLSMPGVDKFVFVGDDKQL--- 891
Query: 632 VESKISDEAGFGRSLFERLTSLNH----SKHLLNIQYRMHPSISLFPNLQFYRNQILDGA 687
S S+ +SLFER+ LN+ + H+LN+QYRMHP IS FP +FYRN + +G
Sbjct: 892 --SSFSEVPYLEQSLFERV--LNNGTYRNPHMLNVQYRMHPKISEFPIKRFYRNLLSNGV 947
Query: 688 NVKSKSYEK-QYLTGTEFGTY-------SFINIIGGREDFIYHSCRNIVEVSAVIKILQK 739
+ + E L ++G+ +F GG F H E ++KIL+
Sbjct: 948 TEEDRFIEGINPLVFVDYGSIHQESKVSNFKRFNGGGYTFTNHG-----EAKLILKILKD 1002
Query: 740 LYKAWVGSKQKVSIGVVSPYTAQ----VVAIRK--------------KIGFEYENKDGFT 781
L + + K I V++PY+AQ +K NK T
Sbjct: 1003 LI--FTKNINKEDISVITPYSAQRDLLATTFQKDDLINPNNEDIEEEVDEDSLTNKKPTT 1060
Query: 782 VK------VKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILG 835
+K V SID FQG E++ II S VR N IGF+ +R+NVALTRAR+ L ++G
Sbjct: 1061 IKTICNIMVSSIDAFQGREKNFIIFSCVRSNEESKIGFVKDERRLNVALTRARNGLILVG 1120
Query: 836 SERTLISSESIWGALV 851
+++ + + +W L
Sbjct: 1121 NKQCMSLGDPLWKELT 1136
>gi|390444674|ref|ZP_10232447.1| ATPase AAA [Nitritalea halalkaliphila LW7]
gi|389664177|gb|EIM75683.1| ATPase AAA [Nitritalea halalkaliphila LW7]
Length = 601
Score = 133 bits (335), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 158/299 (52%), Gaps = 33/299 (11%)
Query: 562 LEDF----CFKRASLFFST--ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAG 615
LED+ F+RA + T ++S +L PL F IDEAAQ E + IP+ A
Sbjct: 284 LEDYIHYDVFQRAQVIACTLVGAASAQLDGYRF-PLVF--IDEAAQGLEPATWIPILRA- 339
Query: 616 INHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLN-HSKHLLNIQYRMHPSISLFP 674
+ V+ GD CQLP ++S + AG R+LFE++ + +L +QYRM I F
Sbjct: 340 -DRVVMAGDHCQLPPTIKSFEAGRAGLSRTLFEKVIQRQPEAAVMLEVQYRMPEVIMRFS 398
Query: 675 NLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYH------SCRNIV 728
FY+ + L A + E L E FI+ G F+ H S N
Sbjct: 399 AQTFYKGK-LQAAPIT----ETHRLHPNE-PILEFIDTAG--TGFLEHKEKDSLSTLNER 450
Query: 729 EVSAVIKILQK-LYKAWVGSKQKV--SIGVVSPYTAQVVAIRKKI--GFEYENKDGFT-- 781
E A+++ L++ + + +G ++ +IG+++PY+AQV A+R I F++ N F+
Sbjct: 451 EAVALLRYLEQCIRRLGIGHMKQEGWNIGLIAPYSAQVRALRHHIFETFQFPNLKAFSEL 510
Query: 782 VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTL 840
+ V SIDGFQG E DI+ IS VR N G IGF+S +R+NVALTRA+ L ++G TL
Sbjct: 511 LTVNSIDGFQGQERDIMAISLVRANETGEIGFLSDIRRMNVALTRAKRKLIVMGDSATL 569
Score = 44.7 bits (104), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 280 VELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRV 326
V L+ GPPGTGKT T+ +LT + L C P+N A+ L R+
Sbjct: 154 VALVHGPPGTGKTSTLVQAILTASYTYPQVLVCAPSNAAVDLLTERL 200
>gi|324500307|gb|ADY40148.1| Regulator of nonsense transcripts 1 [Ascaris suum]
Length = 1087
Score = 133 bits (335), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 154/295 (52%), Gaps = 22/295 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E + + + G+ VL+GD CQL ++ K + +AG +SLFERL L
Sbjct: 598 VLIDESTQATEPEVMVAV-VRGVKQLVLVGDHCQLGPVIMCKKAAKAGLSQSLFERLVVL 656
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF------GTY 707
L +QYRMHP++S FP+ FY + +G E+Q L G ++
Sbjct: 657 GTRPIRLQVQYRMHPALSAFPSNVFYEGTLQNGVT----QGERQ-LAGVDWQWPVPDKPM 711
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---V 763
F + G E S N E + V K+ + KA + +Q IG+++PY Q +
Sbjct: 712 MFWSCYGQEELSPSGTSYLNRTEAANVEKVATRFLKAGLRPEQ---IGIITPYEGQRSYI 768
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
V + G +K ++V ++D FQG E+DIII++ VR N IGF++ +R+NVA
Sbjct: 769 VQFMQTQG-ALHSKLYLEMEVANVDAFQGREKDIIIVTCVRSNEHQGIGFLNDSRRLNVA 827
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
LTRA++ + I+G+ + ++S +W L+ K + C NL + + +SK
Sbjct: 828 LTRAKYGVIIIGNAK-ILSRHPLWNQLLTMFKEKNCLVEG-PLNNLKPSPITLSK 880
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 110/251 (43%), Gaps = 54/251 (21%)
Query: 154 WTFV-SVTTVPDDE-DENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWNSL 211
W+ V SV +PD+ DE E R K + NM +T + F++ N R+ +L
Sbjct: 338 WSCVGSVIKIPDNHNDEIGIEMRSKAE---NMPTDTRTNFTCEFVW--NSTSFDRMHAAL 392
Query: 212 HMCGNWKVITQVLGTDSVVDERC------------ELCSVQRKGQWDEKFGPSFSSTLNE 259
+ G DE C E+ + K Q ++F LN
Sbjct: 393 RLLGQ--------------DESCVSQFIYHKLLGHEVDDIVFKVQLPKRFSAPGLPELNH 438
Query: 260 SQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLR-IKCRTLACTPTNVA 318
SQV A+ L+R + LI GPPGTGKT T + ++ L+R + L C P+N+A
Sbjct: 439 SQVQAVKMVLQR-------PLSLIQGPPGTGKTVTSATIVYHLVRQTSGQVLVCAPSNIA 491
Query: 319 ITELASRV----LKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRI 374
+ +LA ++ LK+V+ K ++P+ ++LK G E+ +++
Sbjct: 492 VDQLAEKIHRTGLKVVRLCAKSRETLDSPVA------FLALHNQLKAVQGAAEL---HKL 542
Query: 375 KKLRECFAPLS 385
++L+E L+
Sbjct: 543 QQLKEEIGELA 553
>gi|392512894|emb|CAD25885.2| INVOLVED IN mRNA DECAY CONTROL (DNA2/NAM7 HELICASE FAMILY)
[Encephalitozoon cuniculi GB-M1]
Length = 776
Score = 133 bits (335), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/261 (35%), Positives = 139/261 (53%), Gaps = 21/261 (8%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEA Q E S IPL + G VL+GD QL + K +AGF +SLFERL S+
Sbjct: 493 VLIDEAVQSTEPLSLIPL-VYGCKKLVLVGDHKQLGPTILCKKVAQAGFKQSLFERLISI 551
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
++L++QYRM + +P+ FY ++L G K + +F +
Sbjct: 552 GVVPYMLSVQYRMDADLCEWPSEMFYNGELLTGG--------KNFCRFDLGIPVNFFYVC 603
Query: 714 GGREDFIYHSCRNIVEVSAVI--KILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI- 770
GRE+ + + A+ I++ L+K V Q IGV++PY Q I +I
Sbjct: 604 YGREEVSASGTSFVNQAEALYCESIIRHLFKCGVTESQ---IGVITPYEGQRSYILNRIF 660
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
G E N +++ ++DGFQG E+D II+S VR N IGF+ +R+NV LTRA+H
Sbjct: 661 GAEPGN-----LEISNVDGFQGREKDFIIVSLVRSNLYQGIGFVGDKRRMNVTLTRAKHG 715
Query: 831 LWILGSERTLISSESIWGALV 851
L I+G+ TL+ + +WG L+
Sbjct: 716 LVIIGNPMTLMKHD-MWGNLL 735
Score = 46.2 bits (108), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 243 GQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTL 302
G +D F LN SQ A+ A L R V LI GPPGTGKT S ++ L
Sbjct: 325 GNFDHIFSSPNLPKLNASQEVAVRAALGR-------KVTLIQGPPGTGKTLVSSAIVYNL 377
Query: 303 LR-IKCRTLACTPTNVAITELASRVLK 328
+R + L P+N A+ +L ++ K
Sbjct: 378 VRHYGGKVLVVAPSNTAVDQLTLKIHK 404
>gi|440298360|gb|ELP90998.1| suppressor with morphological effect on genitalia family protein
(smg-2), partial [Entamoeba invadens IP1]
Length = 309
Score = 133 bits (335), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 136/252 (53%), Gaps = 14/252 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+VIDE+AQ E E+ + + AVLIGD QLP V S + G +S+FERL
Sbjct: 20 VVIDESAQSIEPETF--GAMIRVQKAVLIGDVQQLPPTVLSTEGKKGGLEKSMFERLLLN 77
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK-QYLTGTEFGTYSFINI 712
LL QYRMHP I+ FPN FY ++L+G + +S ++ Q + F++
Sbjct: 78 KVPYALLTTQYRMHPQIAKFPNDNFYAGKLLNGVSEDDRSDQRLQGILPNPLFPVMFVHC 137
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGF 772
G + + V++ L L+ G K IG++SPY+ Q R+ +G
Sbjct: 138 KGDEFYGVSGKSYGNSQEKEVVQYLIDLFNRK-GIKDN-EIGIISPYSTQ----RELLGV 191
Query: 773 EYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLW 832
++ T++V S+DGFQG E++ IIIS VR N IGF+S +R+NVALTRA+ L
Sbjct: 192 AHK-----TIEVASVDGFQGNEKEFIIISCVRSNEQQGIGFLSDHRRLNVALTRAKRGLV 246
Query: 833 ILGSERTLISSE 844
I+G TLIS++
Sbjct: 247 IVGDAHTLISNQ 258
>gi|396082359|gb|AFN83969.1| putative DNA helicase [Encephalitozoon romaleae SJ-2008]
Length = 779
Score = 133 bits (335), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 141/264 (53%), Gaps = 21/264 (7%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
++++IDEA Q E S IPL + G VL+GD QL + K +AGF +SLFERL
Sbjct: 493 FHYVLIDEAVQSTEPLSLIPL-VYGCKKLVLVGDHKQLGPTILCKKVAQAGFKQSLFERL 551
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFI 710
S+ ++L+IQYRM + +P+ FY ++L G K++ +F
Sbjct: 552 ISIGVVPYVLSIQYRMDTDLCEWPSEMFYNGELLTGG--------KRFCRFDLGIPTNFF 603
Query: 711 NIIGGREDFIYHSCRNIVEVSAVI--KILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
+ GRE+ I + A+ I++ L+K V Q IGV++PY Q I
Sbjct: 604 YVCYGREEVSASGTSFINQAEALYCESIIRHLFKCGVTENQ---IGVITPYEGQRSYILN 660
Query: 769 KI-GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+I G E N +++ ++DGFQG E+D II+S VR N IGF+ +R+NV LTRA
Sbjct: 661 RIFGAEPGN-----LEISNVDGFQGREKDFIIVSLVRSNLYQGIGFVGDKRRMNVTLTRA 715
Query: 828 RHCLWILGSERTLISSESIWGALV 851
+H L I+G+ TL+ + +W L+
Sbjct: 716 KHGLVIIGNPTTLMKHD-MWSNLL 738
Score = 43.9 bits (102), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 246 DEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLR- 304
D F P LN SQ A+ A L R V LI GPPGTGKT S ++ ++
Sbjct: 328 DHIFSPPNLPKLNTSQETAVRAALGR-------KVTLIQGPPGTGKTLVSSSIVYNFVKH 380
Query: 305 IKCRTLACTPTNVAITELASRVLK 328
+ L P+N A+ +L ++ K
Sbjct: 381 YGGKVLVVAPSNTAVDQLTLKIHK 404
>gi|149039168|gb|EDL93388.1| rCG45460 [Rattus norvegicus]
Length = 954
Score = 133 bits (335), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 150/282 (53%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N VL+GD QLP V S + E G+ +S+ R
Sbjct: 458 PFSCVIVDEAGQSCEVETLSPL-IHRCNKLVLVGDPKQLPPTVISMKAQEYGYDQSMMAR 516
Query: 650 LTSL---NHSKHL--------LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L N +++ L IQYRMHP I LFP+ Y N+K+ +
Sbjct: 517 FCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVY------NKNLKTNRLTETI 570
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
+E F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 571 RCSSEWPFQPYLVFDVGDGSEQRDNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGII 629
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D II++ VR + GSIGF++
Sbjct: 630 THYKAQKTMIQKDLEKEFDKKG--PAEVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLA 687
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 688 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WYELIQDAQKR 728
Score = 46.2 bits (108), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 244 LIHGPPGTGKSKTIVGLLYRLLTESQRKGHSDENFNAKIKQNRVLVCAPSNAAVDELMKK 303
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K P+ GDI L
Sbjct: 304 IILEFKEKCK---DKKNPLGNCGDINL 327
>gi|359070644|ref|XP_002691695.2| PREDICTED: LOW QUALITY PROTEIN: probable helicase senataxin [Bos
taurus]
Length = 2663
Score = 133 bits (335), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 147/281 (52%), Gaps = 23/281 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N VL+GD QLP V S + + G+ +S+ R
Sbjct: 2165 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLVLVGDPKQLPPTVISVKAQDYGYDQSMMAR 2223
Query: 650 LTSL-------NHSKHL----LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L N L L IQYRMHP I LFP+ Y DG ++ E
Sbjct: 2224 FHKLLEESVEHNMIGRLPVLQLTIQYRMHPDICLFPSSYIY-----DGILRTNRGTETSR 2278
Query: 699 LTGT-EFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVS 757
+ F Y ++ G E S N+ E+ V++++ KL K +IG+++
Sbjct: 2279 CSSDWPFQPYLVFDVGDGLERRDNDSYVNVQEIKLVMELI-KLIKDKRRDVTFRNIGIIT 2337
Query: 758 PYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCN-TGGSIGFISK 816
Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR N T GSIGF++
Sbjct: 2338 HYKAQKTMIQKDLDKEFDRKGA--AEVDTVDAFQGRQKDCVIVTCVRANATQGSIGFLAS 2395
Query: 817 PQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ + W L+ DA+ R
Sbjct: 2396 LQRLNVTITRAKYSLFILGHLRTLVENRH-WYHLIQDAQKR 2435
Score = 46.2 bits (108), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 20/113 (17%)
Query: 257 LNESQVGAM-LACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL------------ 303
NE Q A+ AC + + LI GPPGTGK+KT+ +L LL
Sbjct: 1925 FNEDQKKAIETACAMVKHSPSVAKICLIHGPPGTGKSKTIVGILYRLLTENQRRGYSDEN 1984
Query: 304 ---RIK-CRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILL 352
+IK R L C P+N A+ EL +++ KE K P+ GDI L
Sbjct: 1985 SNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCK---DKKNPMGNCGDINL 2034
>gi|114325426|gb|AAH32622.2| SETX protein [Homo sapiens]
Length = 1030
Score = 133 bits (335), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 150/282 (53%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 527 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 585
Query: 650 LTSL--NHSKH---------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L + +H L +QYRMHP I LFP+ Y N+K+ +
Sbjct: 586 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVY------NRNLKTNRQTEAI 639
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
++ F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 640 RCSSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGII 698
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR N+ GSIGF++
Sbjct: 699 THYKAQKTMIQKDLDKEFDRKG--PAEVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLA 756
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 757 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 797
Score = 46.2 bits (108), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 19/87 (21%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 313 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 372
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K D ++ P+ GDI L
Sbjct: 373 IILEFKEKCK-DKKN--PLGNCGDINL 396
>gi|42475934|tpg|DAA01946.1| TPA_exp: senataxin [Mus musculus]
Length = 2646
Score = 133 bits (335), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 150/282 (53%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 2150 PFSCVIVDEAGQSCEVETLSPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2208
Query: 650 LTSL---NHSKHL--------LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L N +++ L IQYRMHP I LFP+ Y N+K+ +
Sbjct: 2209 FCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVY------NKNLKTNRLTESI 2262
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
+E F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 2263 RCSSEWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGII 2321
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D II++ VR + GSIGF++
Sbjct: 2322 THYKAQKTMIQKDLEKEFDKKG--PAEVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLA 2379
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 2380 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WYELIQDAQKR 2420
Score = 47.4 bits (111), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 52/115 (45%), Gaps = 23/115 (20%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1936 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENFNAKIKQNRVLVCAPSNAAVDELMKK 1995
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYL----NYRIKK 376
++ KE K P+ GDI L +N + L N+R+KK
Sbjct: 1996 IILEFKEKCK---DKKNPLGNCGDINLVRLGPEKSINTEVLKFSLDSQVNHRMKK 2047
>gi|168705200|ref|ZP_02737477.1| DNA-binding protein SMUBP-2 [Gemmata obscuriglobus UQM 2246]
Length = 766
Score = 133 bits (335), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 134/263 (50%), Gaps = 26/263 (9%)
Query: 592 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT 651
+ +VIDEA Q E + +PL A N VL GD CQLP V S + E G SL ERL
Sbjct: 493 DVVVIDEACQSTEPAAWVPLLRA--NKVVLAGDHCQLPPTVLSPEAAERGLSVSLMERLV 550
Query: 652 SL--NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKS------KSYEKQYLTGTE 703
+ LL +Q+RMH ++ F N +FY +Q++ +V + + LT T
Sbjct: 551 RQFGPGASRLLTVQHRMHAAVMGFSNGEFYDSQLVAHESVAAHLLCHLPGVARDPLTET- 609
Query: 704 FGTYSFINIIGGREDFIYH----SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPY 759
FI+ G D S N E + +K ++ L + Q IG+++PY
Sbjct: 610 --PVQFIDTAGASYDEELEEDTGSRFNAQEATLAVKKVRALLALGIAPSQ---IGLITPY 664
Query: 760 TAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQR 819
AQV +R+K+ D +++ S+DGFQG E++ I++S VR N G IGF+S +R
Sbjct: 665 RAQVRLLREKLA------DVPGLEIDSVDGFQGREKEAIVVSLVRSNNEGEIGFLSDTRR 718
Query: 820 VNVALTRARHCLWILGSERTLIS 842
NVA TRAR L ++G TL S
Sbjct: 719 TNVAFTRARRKLLVIGDSATLAS 741
Score = 46.2 bits (108), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 254 SSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACT 313
STLNE Q A+ L D +I GPPGTGKT TV + L+ + LAC
Sbjct: 312 PSTLNEPQRDAVAFALAAPDFA------IIHGPPGTGKTTTVVEFIRKLVARGDKVLACA 365
Query: 314 PTNVAITELASRVL 327
P+N A+ L ++L
Sbjct: 366 PSNHAVDNLLEKLL 379
>gi|67472499|ref|XP_652053.1| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|56468857|gb|EAL46665.1| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 931
Score = 133 bits (335), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 106/324 (32%), Positives = 166/324 (51%), Gaps = 45/324 (13%)
Query: 595 VIDEAAQLKESESTIPLQLAGI---NHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT 651
++DEAAQ E E+ LAGI VLIGD QL S + EAGF +S+FER
Sbjct: 569 IVDEAAQSLEPET-----LAGIINVRKTVLIGDIQQLQPTCLSTEAREAGFQKSMFERFM 623
Query: 652 SLNHSKH-LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYS-- 708
+ K +L QYRMHP+IS F N FY +++ +G + K + ++ + + F Y+
Sbjct: 624 ANTQIKRTMLKTQYRMHPAISEFSNKMFYSSKLENGVSSKDR-FDDRIINF--FPDYTNP 680
Query: 709 --FINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSK-QKVSIGVVSPYTAQVVA 765
FIN G Y S + ++I+Q++ + + + ++ IG++SPY AQ
Sbjct: 681 IMFINCDGTEH---YGSSGTSYNNAGEVQIIQEVVEKLLNNDIEENEIGIISPYQAQQEL 737
Query: 766 IRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALT 825
I + + + +KV +IDGFQG E++ II S VR N +GF++ +R+NVAL
Sbjct: 738 ISQYVSTK--------IKVANIDGFQGNEKEYIIFSCVRSNQTLGVGFVNDYKRLNVALK 789
Query: 826 RARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEE--------------RNLAK 871
RA+ L I+G+ +TLI+S+ +W L+ R F E R L K
Sbjct: 790 RAKSGLIIIGNIQTLITSK-VWNMLIHQFYLRDALFELKEHDFVQYNVENQEEFNRPLEK 848
Query: 872 ARLEVSKEL--VEIGAESLTSTSQ 893
+ +V E+ ++ A + STS+
Sbjct: 849 SPFQVQYEVDDLKTNANTFKSTSR 872
>gi|74711848|sp|Q6ZU11.1|YD002_HUMAN RecName: Full=Uncharacterized protein FLJ44066
gi|34532402|dbj|BAC86416.1| unnamed protein product [Homo sapiens]
Length = 926
Score = 133 bits (335), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 144/267 (53%), Gaps = 14/267 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVE-SKISDEAGFGRSLFERLTS 652
+V+DE +Q+ E S +P+ +L+GD QLP ++ S + E G ++LF+RL
Sbjct: 628 VVLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCL 687
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ H LL QYR HP+IS N FY+ +++G +S ++L T F N+
Sbjct: 688 MGHKPILLRTQYRCHPAISAIANDLFYKGALMNGVTEIERSPLLEWLP-----TLCFYNV 742
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI-G 771
G + +S N+ E + +K++Q L + + IGV++ Y +Q+ + +
Sbjct: 743 KGLEQIERDNSFHNVAEATFTLKLIQSLIASGIAGSM---IGVITLYKSQMYKLCHLLSA 799
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
++ + D TV+V ++D FQG E++III+S VR +GFI +R+NVALTR + L
Sbjct: 800 VDFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRGKRHL 856
Query: 832 WILGSERTLISSESIWGALVCDAKARQ 858
I+G+ L ++ +WG ++ + R+
Sbjct: 857 LIVGNLACLRKNQ-LWGRVIQHCEGRE 882
>gi|211827336|gb|AAH32600.2| SETX protein [Homo sapiens]
Length = 930
Score = 133 bits (335), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 150/282 (53%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 427 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 485
Query: 650 LTSL--NHSKH---------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L + +H L +QYRMHP I LFP+ Y N+K+ +
Sbjct: 486 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVY------NRNLKTNRQTEAI 539
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
++ F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 540 RCSSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGII 598
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR N+ GSIGF++
Sbjct: 599 THYKAQKTMIQKDLDKEFDRKG--PAEVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLA 656
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 657 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 697
Score = 46.6 bits (109), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 52/115 (45%), Gaps = 23/115 (20%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 213 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 272
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYL----NYRIKK 376
++ KE K P+ GDI L +N + L N+R+KK
Sbjct: 273 IILEFKEKCK---DKKNPLGNCGDINLVRLGPEKSINSEVLKFSLDSQVNHRMKK 324
>gi|50603852|gb|AAH78166.1| SETX protein, partial [Homo sapiens]
Length = 917
Score = 133 bits (335), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 150/282 (53%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 414 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 472
Query: 650 LTSL--NHSKH---------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L + +H L +QYRMHP I LFP+ Y N+K+ +
Sbjct: 473 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVY------NRNLKTNRQTEAI 526
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
++ F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 527 RCSSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGII 585
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR N+ GSIGF++
Sbjct: 586 THYKAQKTMIQKDLDKEFDRKG--PAEVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLA 643
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 644 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 684
Score = 46.6 bits (109), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 200 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 259
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K P+ GDI L
Sbjct: 260 IILEFKEKCK---DKKNPLGNCGDINL 283
>gi|113722131|ref|NP_932150.2| probable helicase senataxin [Mus musculus]
gi|160184873|sp|A2AKX3.1|SETX_MOUSE RecName: Full=Probable helicase senataxin; AltName: Full=Amyotrophic
lateral sclerosis 4 protein homolog; AltName: Full=SEN1
homolog
gi|225356476|gb|AAI56404.1| Senataxin [synthetic construct]
Length = 2646
Score = 133 bits (334), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 150/282 (53%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 2150 PFSCVIVDEAGQSCEVETLSPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2208
Query: 650 LTSL---NHSKHL--------LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L N +++ L IQYRMHP I LFP+ Y N+K+ +
Sbjct: 2209 FCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVY------NKNLKTNRLTESI 2262
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
+E F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 2263 RCSSEWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGII 2321
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D II++ VR + GSIGF++
Sbjct: 2322 THYKAQKTMIQKDLEKEFDKKG--PAEVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLA 2379
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 2380 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WYELIQDAQKR 2420
Score = 47.4 bits (111), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 52/115 (45%), Gaps = 23/115 (20%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1936 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENFNAKIKQNRVLVCAPSNAAVDELMKK 1995
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYL----NYRIKK 376
++ KE K P+ GDI L +N + L N+R+KK
Sbjct: 1996 IILEFKEKCK---DKKNPLGNCGDINLVRLGPEKSINTEVLKFSLDSQVNHRMKK 2047
>gi|67481561|ref|XP_656130.1| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|56473310|gb|EAL50744.1| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449704720|gb|EMD44907.1| Hypothetical protein EHI5A_012990 [Entamoeba histolytica KU27]
Length = 937
Score = 133 bits (334), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 137/264 (51%), Gaps = 11/264 (4%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
++ ++IDE+ Q E E I L + L+GD CQL ++ S + + G G +F RL
Sbjct: 566 IDTVLIDESTQADEPECLICLN-NSVKQLFLVGDHCQLGPILNSSRAKKYGLGLPMFSRL 624
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK-QYLTGTEFGTYSF 709
L H + L QYRMHP +S F + FY + +G + + +Y + F
Sbjct: 625 LQLGHEPYRLQFQYRMHPCLSEFSSQTFYDGVLQNGVTALERQFPSLKYFWFKQNKPMMF 684
Query: 710 INIIGGREDFIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
I G+E + + N EV + +I+ K+ V Q IGV++PY AQ AI
Sbjct: 685 I-AANGKESYGSNGTSYINDEEVFIIEQIIIKMLGNKVSPSQ---IGVITPYIAQKQAII 740
Query: 768 KKIGFEYENKDG--FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALT 825
++ + +++ S+D FQG E+D II STVR N IGF+S PQR+NV++T
Sbjct: 741 SRLSLNRRISEAQLNDIEIASVDSFQGREKDFIIFSTVRSNEISDIGFLSIPQRLNVSIT 800
Query: 826 RARHCLWILGSERTLISSESIWGA 849
RA++ L ++G+ TL+ + +W A
Sbjct: 801 RAKYGLVVVGNPETLMQN-PLWCA 823
>gi|26338079|dbj|BAC32725.1| unnamed protein product [Mus musculus]
Length = 528
Score = 133 bits (334), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 142/267 (53%), Gaps = 14/267 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVE-SKISDEAGFGRSLFERLTS 652
+V+DE +Q+ E S +P+ +L+GD QLP ++ S + E G ++LF+RL
Sbjct: 246 VVLDECSQMTEPASLLPIARFQCEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCL 305
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ H LL QYR HP+IS N FY +++G + + +S ++L T F N+
Sbjct: 306 MGHKPVLLRTQYRCHPAISAIANDLFYEGSLVNGISERERSPVLEWLP-----TLCFYNV 360
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI-G 771
G + +S N+ E + +K++Q L + V S IGV++ Y +Q+ I +
Sbjct: 361 TGAEQVERENSFVNVAEATFTLKLIQSLMASGVES---CMIGVITLYKSQMYKICNLLSA 417
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
+ + D V+V ++D FQG E++I I+S VR +GFI +R+NVALTR R L
Sbjct: 418 VDVGHPDVKAVQVSTVDAFQGAEKEITILSCVRTR---QVGFIDSEKRMNVALTRGRRHL 474
Query: 832 WILGSERTLISSESIWGALVCDAKARQ 858
I+GS + + +WG ++ + R+
Sbjct: 475 LIVGS-LSCLRKNRLWGRVIQHCEGRE 500
>gi|19113992|ref|NP_593080.1| ATP-dependent RNA helicase Upf1 [Schizosaccharomyces pombe 972h-]
gi|19924241|sp|Q09820.2|RENT1_SCHPO RecName: Full=ATP-dependent helicase upf1; AltName:
Full=Nonsense-mediated mRNA decay protein upf1; AltName:
Full=Regulator of nonsense transcripts 1 homolog;
AltName: Full=Up-frameshift suppressor 1
gi|4894186|emb|CAA91194.2| ATP-dependent RNA helicase Upf1 [Schizosaccharomyces pombe]
Length = 925
Score = 133 bits (334), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 141/288 (48%), Gaps = 27/288 (9%)
Query: 579 SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISD 638
S YK SV +IDEA Q E E IPL L G VL+GD QL +V +K
Sbjct: 554 SKYKFRSV--------LIDEATQASEPECMIPLVL-GAKQVVLVGDHQQLGPVVMNKKVA 604
Query: 639 EAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
A +SLFERL L +S L +QYRMHP +S FP+ FY + +G +
Sbjct: 605 LASLSQSLFERLIILGNSPFRLVVQYRMHPCLSEFPSNTFYEGTLQNGVTTSERIARHVD 664
Query: 699 LTGTEFGTYSFINIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
+ + G+E+ S N E S KI+ ++ V +Q IG+V
Sbjct: 665 FPWIQPDSPLMFYANFGQEELSASGTSFLNRTEASTCEKIVTTFLRSNVLPEQ---IGIV 721
Query: 757 SPYTAQVVAIRKKIGFEYENKDGF-------TVKVKSIDGFQGGEEDIIIISTVRCNTGG 809
+PY Q I +Y +G V+V S+D FQG E+D II+S VR +
Sbjct: 722 TPYDGQRSYI-----VQYMQNNGSMQKDLYKAVEVASVDAFQGREKDFIILSCVRSSEHQ 776
Query: 810 SIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
IGF++ P+R+NVALTRA++ + +LG+ + L + ++W V K +
Sbjct: 777 GIGFVNDPRRLNVALTRAKYGVIVLGNPKVL-AKHALWYHFVLHCKEK 823
Score = 47.0 bits (110), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 18/90 (20%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCR-------T 309
LN SQ A+ A L + + LI GPPGTGKT T + ++ L ++ R
Sbjct: 393 LNASQSEAVRAVLSK-------PLSLIQGPPGTGKTVTSASVVYHLATMQSRKRKSHSPV 445
Query: 310 LACTPTNVAITELASRV----LKLVKESYK 335
L C P+NVA+ +LA ++ L++V+ + K
Sbjct: 446 LVCAPSNVAVDQLAEKIHRTGLRVVRVAAK 475
>gi|170593003|ref|XP_001901254.1| Regulator of nonsense transcripts 1 homolog [Brugia malayi]
gi|158591321|gb|EDP29934.1| Regulator of nonsense transcripts 1 homolog, putative [Brugia
malayi]
Length = 1112
Score = 133 bits (334), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 33/311 (10%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E + + + G+ VL+GD CQL ++ K + +AG +SLFERL L
Sbjct: 597 VLIDESTQATEPEVMVAV-VCGVRQLVLVGDHCQLGPVIMCKKAAKAGLSQSLFERLVLL 655
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFY----RNQILDGANVKSKSYEKQYLTGTEF--GTY 707
+ L +QYRMHP++S FP+ FY +N + +G ++ K E L+ F G
Sbjct: 656 GNRPIRLQVQYRMHPALSSFPSNVFYEGSLQNGVTEGKHLSMKRKEVINLSHMCFISGER 715
Query: 708 SFINI----IGGREDFIYHSCR-------------NIVEVSAVIKILQKLYKAWVGSKQK 750
I I + ++ SC N E + V K+ + KA + +Q
Sbjct: 716 QLIGIDWQWPVPDKPMMFWSCYGQEELSSSGTSFLNRTEAANVEKLATRFLKAGLKPEQ- 774
Query: 751 VSIGVVSPYTAQ---VVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT 807
IG+++PY Q +V + G +K ++V ++D FQG E+DIII++ VR N
Sbjct: 775 --IGIITPYEGQRSYIVQFMQTQG-ALHSKLYLEMEVANVDAFQGREKDIIIVTCVRSND 831
Query: 808 GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEER 867
IGF++ +R+NVALTRA+ L I+G+ + L S +W L+ K + C
Sbjct: 832 HQGIGFLNDSRRLNVALTRAKFGLIIVGNAKVL-SRHPLWNYLLSMFKEKGCLVEG-PLN 889
Query: 868 NLAKARLEVSK 878
NL + + +SK
Sbjct: 890 NLKPSPITLSK 900
Score = 55.1 bits (131), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 33/209 (15%)
Query: 150 VGRTWTFVS-VTTVPDDE-DENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRI 207
G W+ V V +PD+ DE E R +KA N V T+ +F ++ N +R+
Sbjct: 333 AGGEWSSVGCVIKIPDNHNDEVGIEMR--LKAEN---VPTDTRTNFTCEFVWNSTSFERM 387
Query: 208 WNSLHMCGNWK------VITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQ 261
+L + G + + +++G D +D+ + K ++F LN SQ
Sbjct: 388 QAALSLLGQDEDCVSQFIYHKLMGHD--IDD------IIFKVSLPKRFSVPGLPELNHSQ 439
Query: 262 VGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLR-IKCRTLACTPTNVAIT 320
V A+ L+R + LI GPPGTGKT T + ++ L++ + L C P+N+A+
Sbjct: 440 VHAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLVKQTNGQVLVCAPSNIAVD 492
Query: 321 ELASRV----LKLVKESYKRDSRSNTPIC 345
+LA ++ LK+V+ K ++P+
Sbjct: 493 QLAEKIHRTGLKVVRLCAKSRETLDSPVA 521
>gi|119608404|gb|EAW87998.1| senataxin, isoform CRA_b [Homo sapiens]
gi|119608405|gb|EAW87999.1| senataxin, isoform CRA_b [Homo sapiens]
Length = 1776
Score = 133 bits (334), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 150/282 (53%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 1273 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 1331
Query: 650 LTSL--NHSKH---------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L + +H L +QYRMHP I LFP+ Y N+K+ +
Sbjct: 1332 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVY------NRNLKTNRQTEAI 1385
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
++ F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 1386 RCSSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGII 1444
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR N+ GSIGF++
Sbjct: 1445 THYKAQKTMIQKDLDKEFDRKG--PAEVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLA 1502
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 1503 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 1543
Score = 46.6 bits (109), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 19/87 (21%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1059 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 1118
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K D ++ P+ GDI L
Sbjct: 1119 IILEFKEKCK-DKKN--PLGNCGDINL 1142
>gi|74142749|dbj|BAE33905.1| unnamed protein product [Mus musculus]
Length = 606
Score = 133 bits (334), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 141/267 (52%), Gaps = 14/267 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVE-SKISDEAGFGRSLFERLTS 652
+V+DE +Q+ E S +P+ +L+GD QLP ++ S + E G ++LF+RL
Sbjct: 310 VVLDECSQMTEPASLLPIARFQCEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCL 369
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ H LL QYR HP+IS N FY +++G + + +S ++L T F N+
Sbjct: 370 MGHKPVLLRTQYRCHPAISAIANDLFYEGSLVNGISERERSPVLEWLP-----TLCFYNV 424
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI-G 771
G + +S N+ E + +K++Q L + V S IGV++ Y +Q+ I +
Sbjct: 425 TGAEQVERENSFVNVAEATFTLKLIQSLMASGVES---CMIGVITLYKSQMYKICNLLSA 481
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
+ + D V+V ++D FQG E++I I+S VR +GFI +R+NVALTR R L
Sbjct: 482 VDVGHPDVKAVQVSTVDAFQGAEKEITILSCVRTR---QVGFIDSEKRMNVALTRGRRHL 538
Query: 832 WILGSERTLISSESIWGALVCDAKARQ 858
I+GS L +WG ++ + R+
Sbjct: 539 LIVGSLSCL-RKNRLWGRVIQHCEGRE 564
>gi|358414658|ref|XP_001787696.2| PREDICTED: probable helicase senataxin [Bos taurus]
Length = 2592
Score = 133 bits (334), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 147/281 (52%), Gaps = 23/281 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N VL+GD QLP V S + + G+ +S+ R
Sbjct: 2094 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLVLVGDPKQLPPTVISVKAQDYGYDQSMMAR 2152
Query: 650 LTSL-------NHSKHL----LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L N L L IQYRMHP I LFP+ Y DG ++ E
Sbjct: 2153 FHKLLEESVEHNMIGRLPVLQLTIQYRMHPDICLFPSSYIY-----DGILRTNRGTETSR 2207
Query: 699 LTGT-EFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVS 757
+ F Y ++ G E S N+ E+ V++++ KL K +IG+++
Sbjct: 2208 CSSDWPFQPYLVFDVGDGLERRDNDSYVNVQEIKLVMELI-KLIKDKRRDVTFRNIGIIT 2266
Query: 758 PYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCN-TGGSIGFISK 816
Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR N T GSIGF++
Sbjct: 2267 HYKAQKTMIQKDLDKEFDRKGA--AEVDTVDAFQGRQKDCVIVTCVRANATQGSIGFLAS 2324
Query: 817 PQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ + W L+ DA+ R
Sbjct: 2325 LQRLNVTITRAKYSLFILGHLRTLVENRH-WYHLIQDAQKR 2364
Score = 46.2 bits (108), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 20/113 (17%)
Query: 257 LNESQVGAM-LACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL------------ 303
NE Q A+ AC + + LI GPPGTGK+KT+ +L LL
Sbjct: 1854 FNEDQKKAIETACAMVKHSPSVAKICLIHGPPGTGKSKTIVGILYRLLTENQRRGYSDEN 1913
Query: 304 ---RIK-CRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILL 352
+IK R L C P+N A+ EL +++ KE K P+ GDI L
Sbjct: 1914 SNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCK---DKKNPMGNCGDINL 1963
>gi|348570176|ref|XP_003470873.1| PREDICTED: probable helicase senataxin-like [Cavia porcellus]
Length = 2661
Score = 133 bits (334), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 146/280 (52%), Gaps = 21/280 (7%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + + G+ +S+ R
Sbjct: 2158 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQDYGYDQSMMAR 2216
Query: 650 LTSL-------NHSKHL----LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L N + L +QYRMHP I LFP+ Y + + +S +
Sbjct: 2217 FCKLLEENVEQNAISRMPVVQLTVQYRMHPDICLFPSNYIYNKSLKTNRSTESIRCSSDW 2276
Query: 699 LTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSP 758
F Y ++ G E S N E+ V++I+ KL K +IG+++
Sbjct: 2277 ----PFQPYLVFDVSDGSERRDNDSYVNAQEIKLVMEIV-KLIKDKKKEINFRNIGIITH 2331
Query: 759 YTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG-GSIGFISKP 817
Y AQ ++K + E++ K +V ++D FQG ++D II++ VR NT GSIGF++
Sbjct: 2332 YKAQKTMLQKDLDREFDRKG--PAEVDTVDAFQGRQKDCIIVTCVRANTAQGSIGFLASL 2389
Query: 818 QRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 2390 QRLNVTITRAKYSLFILGHLRTLMENQH-WNELIQDAQKR 2428
Score = 48.1 bits (113), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 45/87 (51%), Gaps = 19/87 (21%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1944 LIHGPPGTGKSKTIVGLLFRLLTENQRRGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2003
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K D R+ P+ GDI L
Sbjct: 2004 IIIEFKEKCK-DKRN--PLGNCGDINL 2027
>gi|401827897|ref|XP_003888241.1| superfamily I DNA/RNA helicase [Encephalitozoon hellem ATCC 50504]
gi|392999441|gb|AFM99260.1| superfamily I DNA/RNA helicase [Encephalitozoon hellem ATCC 50504]
Length = 771
Score = 133 bits (334), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 140/264 (53%), Gaps = 21/264 (7%)
Query: 591 LNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERL 650
++++IDEA Q E S IPL + G VL+GD QL + K +AGF +SLFERL
Sbjct: 485 FHYVLIDEAVQSTEPLSLIPL-VYGCKKLVLVGDHKQLGPTILCKKVAQAGFKQSLFERL 543
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFI 710
S+ ++L++QYRM + +P+ FY ++L G K + +F
Sbjct: 544 ISIGVVPYVLSVQYRMDTDLCEWPSEMFYNGELLTGG--------KGFCRFDLGIPTNFF 595
Query: 711 NIIGGREDFIYHSCRNIVEVSAVI--KILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
+ GRE+ I + A+ I++ L+K V Q IGV++PY Q I
Sbjct: 596 YVCYGREEVSASGTSFINQAEALYCESIIRHLFKCGVTESQ---IGVITPYEGQRSYILN 652
Query: 769 KI-GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
+I G E N +++ ++DGFQG E+D II+S VR N IGF+ +R+NV LTRA
Sbjct: 653 RIFGAEPGN-----LEISNVDGFQGREKDFIIVSLVRSNLYQGIGFVGDKRRMNVTLTRA 707
Query: 828 RHCLWILGSERTLISSESIWGALV 851
+H L I+G+ TL+ + IW L+
Sbjct: 708 KHGLVIIGNPTTLMKHD-IWSNLL 730
>gi|328353104|emb|CCA39502.1| Regulator of nonsense transcripts 1 [Komagataella pastoris CBS
7435]
Length = 967
Score = 133 bits (334), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 143/269 (53%), Gaps = 20/269 (7%)
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS 652
+++IDE+ Q E ES IP+ + G +L+GD QL ++ + +AG +SLFERL
Sbjct: 562 YVLIDESTQPSEPESLIPI-VKGAKQVILVGDHQQLGPVILHNGAAKAGLRQSLFERLIK 620
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYS---- 708
L H L +QYRMHPS+S FP+ FY + +G S+E++ + + F +
Sbjct: 621 LGHIPIRLEVQYRMHPSLSEFPSNMFYDGSLQNGV-----SHEQRLIRRSSFPWPAPGIP 675
Query: 709 --FINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVA 765
F + G E I S N E KI+ +L + Q IGV++PY Q
Sbjct: 676 LLFWSSYGTEEISISGTSFLNRSEAMNCEKIISRLLSEGIKPHQ---IGVITPYQGQRDY 732
Query: 766 IRKKI---GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNV 822
I + + G + + V+V S+D FQG E+D II S R N +IGF+ +R+NV
Sbjct: 733 IVQYLLMNGAHPDREIYQDVEVASVDAFQGREKDFIIFSCTRSNHTNTIGFLKDARRLNV 792
Query: 823 ALTRARHCLWILGSERTLISSESIWGALV 851
A+TRA++ L++LG+ +TL + +W L+
Sbjct: 793 AITRAKYGLFVLGNIKTL-QKDPLWNRLL 820
Score = 45.1 bits (105), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 15/96 (15%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRT 309
P+F+ LN SQV A+ + L++ + LI GPPGTGKT T + ++ L + K +
Sbjct: 397 PNFTQ-LNPSQVNAVKSVLQQR-------LSLIQGPPGTGKTVTSATIVYHLAKSKKKKV 448
Query: 310 LACTPTNVAITELASRV----LKLVKESYKRDSRSN 341
L +N+A+ LAS++ LK+V+ + + SR N
Sbjct: 449 LVTASSNIAVDHLASKLEDIGLKVVRVTAR--SREN 482
>gi|254826809|ref|NP_060862.3| prematurely terminated mRNA decay factor-like [Homo sapiens]
gi|119626686|gb|EAX06281.1| hCG21296, isoform CRA_c [Homo sapiens]
Length = 2104
Score = 133 bits (334), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 144/267 (53%), Gaps = 14/267 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVE-SKISDEAGFGRSLFERLTS 652
+V+DE +Q+ E S +P+ +L+GD QLP ++ S + E G ++LF+RL
Sbjct: 1806 VVLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCL 1865
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ H LL QYR HP+IS N FY+ +++G +S ++L T F N+
Sbjct: 1866 MGHKPILLRTQYRCHPAISAIANDLFYKGALMNGVTEIERSPLLEWLP-----TLCFYNV 1920
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI-G 771
G + +S N+ E + +K++Q L + + IGV++ Y +Q+ + +
Sbjct: 1921 KGLEQIERDNSFHNVAEATFTLKLIQSLIASGIAGSM---IGVITLYKSQMYKLCHLLSA 1977
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
++ + D TV+V ++D FQG E++III+S VR +GFI +R+NVALTR + L
Sbjct: 1978 VDFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRGKRHL 2034
Query: 832 WILGSERTLISSESIWGALVCDAKARQ 858
I+G+ L ++ +WG ++ + R+
Sbjct: 2035 LIVGNLACLRKNQ-LWGRVIQHCEGRE 2060
>gi|254571547|ref|XP_002492883.1| ATP-dependent RNA helicase of the SFI superfamily, required for
nonsense mediated mRNA decay and for [Komagataella
pastoris GS115]
gi|238032681|emb|CAY70704.1| ATP-dependent RNA helicase of the SFI superfamily, required for
nonsense mediated mRNA decay and for [Komagataella
pastoris GS115]
Length = 941
Score = 133 bits (334), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 143/269 (53%), Gaps = 20/269 (7%)
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS 652
+++IDE+ Q E ES IP+ + G +L+GD QL ++ + +AG +SLFERL
Sbjct: 536 YVLIDESTQPSEPESLIPI-VKGAKQVILVGDHQQLGPVILHNGAAKAGLRQSLFERLIK 594
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYS---- 708
L H L +QYRMHPS+S FP+ FY + +G S+E++ + + F +
Sbjct: 595 LGHIPIRLEVQYRMHPSLSEFPSNMFYDGSLQNGV-----SHEQRLIRRSSFPWPAPGIP 649
Query: 709 --FINIIGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVA 765
F + G E I S N E KI+ +L + Q IGV++PY Q
Sbjct: 650 LLFWSSYGTEEISISGTSFLNRSEAMNCEKIISRLLSEGIKPHQ---IGVITPYQGQRDY 706
Query: 766 IRKKI---GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNV 822
I + + G + + V+V S+D FQG E+D II S R N +IGF+ +R+NV
Sbjct: 707 IVQYLLMNGAHPDREIYQDVEVASVDAFQGREKDFIIFSCTRSNHTNTIGFLKDARRLNV 766
Query: 823 ALTRARHCLWILGSERTLISSESIWGALV 851
A+TRA++ L++LG+ +TL + +W L+
Sbjct: 767 AITRAKYGLFVLGNIKTL-QKDPLWNRLL 794
Score = 44.7 bits (104), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 15/96 (15%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRT 309
P+F+ LN SQV A+ + L++ + LI GPPGTGKT T + ++ L + K +
Sbjct: 371 PNFTQ-LNPSQVNAVKSVLQQR-------LSLIQGPPGTGKTVTSATIVYHLAKSKKKKV 422
Query: 310 LACTPTNVAITELASRV----LKLVKESYKRDSRSN 341
L +N+A+ LAS++ LK+V+ + + SR N
Sbjct: 423 LVTASSNIAVDHLASKLEDIGLKVVRVTAR--SREN 456
>gi|410957029|ref|XP_003985137.1| PREDICTED: uncharacterized protein FLJ44066, partial [Felis catus]
Length = 1242
Score = 133 bits (334), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 142/267 (53%), Gaps = 14/267 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVE-SKISDEAGFGRSLFERLTS 652
+V+DE +Q+ E S +P+ +L+GD QLP ++ S + E G ++LF+RL
Sbjct: 943 VVLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCL 1002
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ H LL QYR HP+IS N FY +++G + +S ++L T F N+
Sbjct: 1003 MGHKPVLLRTQYRCHPAISAISNDLFYEGNLMNGISETERSPLLEWLP-----TLCFYNV 1057
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI-G 771
G + +S N+ E + +K++Q L + + IGV++ Y +Q+ + +
Sbjct: 1058 KGLEQIERDNSFHNVAEAAFTLKLIQSLIVSGIAGS---VIGVITLYKSQMYKLCHSLNA 1114
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
++++ D V+V ++D FQG E++III+S VR +GFI +R+NVALTR R L
Sbjct: 1115 VDFDHPDIKAVQVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRGRRHL 1171
Query: 832 WILGSERTLISSESIWGALVCDAKARQ 858
I+G+ L +WG ++ + R+
Sbjct: 1172 LIVGNLACL-RKNRLWGRVIQHCEGRE 1197
>gi|354501487|ref|XP_003512822.1| PREDICTED: hypothetical protein LOC100755417 [Cricetulus griseus]
Length = 1856
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 142/267 (53%), Gaps = 14/267 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVE-SKISDEAGFGRSLFERLTS 652
+V+DE +Q+ E S +P+ +L+GD QLP ++ S + E G ++LF+RL
Sbjct: 1560 VVLDECSQMTEPASLLPIARFESEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCL 1619
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ H +L QYR HP IS N FY +++G + +S ++L T F N+
Sbjct: 1620 MGHKPVVLRTQYRCHPVISAIANDLFYEGNLMNGISETERSPVVEWLP-----TLCFYNV 1674
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI-G 771
G + +S +N+ E + +K++Q L + + IGV++ Y +Q+ I +
Sbjct: 1675 TGAEQVERENSFQNVAEAAFTLKLIQSLIASGIAGSM---IGVITLYKSQMYKICHLLSA 1731
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
++ + + V+V ++D FQG E++III+S VR +GFI +R+NVALTR+R L
Sbjct: 1732 MDFNHPEAKAVQVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRSRRHL 1788
Query: 832 WILGSERTLISSESIWGALVCDAKARQ 858
I+GS + + +W ++ + R+
Sbjct: 1789 LIVGS-LSCLRKNRLWERVIQHCEGRE 1814
>gi|300708470|ref|XP_002996413.1| hypothetical protein NCER_100487 [Nosema ceranae BRL01]
gi|239605714|gb|EEQ82742.1| hypothetical protein NCER_100487 [Nosema ceranae BRL01]
Length = 683
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 143/262 (54%), Gaps = 23/262 (8%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DEA Q E + IPL + G +L+GD QL + K +AGF +SLFERL L
Sbjct: 432 VLVDEAVQSTEPLNIIPL-VYGCTKLILVGDHKQLGPTILCKKVAKAGFKQSLFERLILL 490
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGT-YSFINI 712
S ++L++QYRMH + +P+ FY ++ G + K G ++F
Sbjct: 491 GISPYILSLQYRMHADLCEWPSETFYNGELQTGNRLFYK---------LNIGIPHNFFYA 541
Query: 713 IGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
G+E+ S N +E I++ L+K+ + KQ IGV++PY Q I +I
Sbjct: 542 CYGKEEVSTSGTSFVNPMEALYCESIIRHLFKSGITEKQ---IGVITPYEGQRSHILNRI 598
Query: 771 -GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
G E N +++ ++DGFQG E+D II+S VR N IGF+ +R+NVALTRA+H
Sbjct: 599 FGSEPGN-----LEISNVDGFQGREKDYIIVSLVRSNLYQGIGFVGDKRRMNVALTRAKH 653
Query: 830 CLWILGSERTLISSESIWGALV 851
L I+G+ T+I ++ W +L+
Sbjct: 654 GLIIIGNPNTMIKHDA-WKSLL 674
>gi|77415498|gb|AAI06018.1| SETX protein, partial [Homo sapiens]
Length = 867
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 150/282 (53%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 364 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 422
Query: 650 LTSL--NHSKH---------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L + +H L +QYRMHP I LFP+ Y N+K+ +
Sbjct: 423 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNR------NLKTNRQTEAI 476
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
++ F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 477 RCSSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGII 535
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR N+ GSIGF++
Sbjct: 536 THYKAQKTMIQKDLDKEFDRKG--PAEVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLA 593
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 594 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 634
Score = 46.6 bits (109), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 52/115 (45%), Gaps = 23/115 (20%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 150 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 209
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYL----NYRIKK 376
++ KE K P+ GDI L +N + L N+R+KK
Sbjct: 210 IILEFKEKCK---DKKNPLGNCGDINLVRLGPEKSINSEVLKFSLDSQVNHRMKK 261
>gi|307102593|gb|EFN50864.1| hypothetical protein CHLNCDRAFT_59413 [Chlorella variabilis]
Length = 762
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 135/282 (47%), Gaps = 23/282 (8%)
Query: 586 VEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEA-GFGR 644
+E + +V+DE AQ E S +PL + G V+ GD+ QLP V S+ + E
Sbjct: 456 LEAQCFRIVVLDECAQATEPSSLVPL-VKGAQCVVMAGDQRQLPPTVVSERAKEMYHLDV 514
Query: 645 SLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF 704
LF RL S LL +QYRMHP+IS FP+ FY ++ G + + +
Sbjct: 515 PLFTRLLEGGVSSRLLEVQYRMHPAISEFPSRHFYSGRVQSGVTQQDRPPVRGVPWTNPA 574
Query: 705 GTYSFINIIGGRED--------------FIYHSCRNIVEVSAVIKILQKLYKAWVGSKQK 750
FINI G E S N E +K LQ++ +
Sbjct: 575 CPVLFINIAEGSEQQALAGNNRRGGSGDSSGASYSNSEEAEVAMKALQRVLQE---DDSV 631
Query: 751 VSIGVVSPYTAQV---VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT 807
SI ++SPY QV ++ + D + V ++DG+QG E D++I STVR N
Sbjct: 632 QSIVLLSPYNGQVRLLTSLLSRAELPEGAADRCQITVSTVDGYQGRESDVVIFSTVRSNP 691
Query: 808 GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGA 849
G +GF+S +R+NVA+TRAR L +LG++ TL + WGA
Sbjct: 692 AGRVGFLSDERRLNVAITRARRGLIVLGNQATL-QHDPNWGA 732
>gi|7022724|dbj|BAA91701.1| unnamed protein product [Homo sapiens]
Length = 828
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 150/282 (53%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 325 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 383
Query: 650 LTSL--NHSKH---------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L + +H L +QYRMHP I LFP+ Y N+K+ +
Sbjct: 384 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNR------NLKTNRQTEAI 437
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
++ F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 438 RCSSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGII 496
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR N+ GSIGF++
Sbjct: 497 THYKAQKTMIQKDLDKEFDRKG--PAEVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLA 554
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 555 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKR 595
Score = 46.2 bits (108), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 55/115 (47%), Gaps = 23/115 (20%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 111 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 170
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYL----NYRIKK 376
++ KE K D ++ P+ GDI L +N + L N+R+KK
Sbjct: 171 IILEFKEKCK-DKKN--PLGNCGDINLVRLGPEKSINSEVLKFSLDSQVNHRMKK 222
>gi|366999404|ref|XP_003684438.1| hypothetical protein TPHA_0B03320 [Tetrapisispora phaffii CBS 4417]
gi|357522734|emb|CCE62004.1| hypothetical protein TPHA_0B03320 [Tetrapisispora phaffii CBS 4417]
Length = 1133
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 163/341 (47%), Gaps = 67/341 (19%)
Query: 562 LEDFCFKRASLFFST--ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHA 619
+ D +A + +T A+ +L S++ P+ +++DEA Q E + +PL L GI
Sbjct: 793 ISDRYVSQAQILLTTNIAAGGRQLKSIKEVPV--VIMDEATQSSEMSTLVPLSLPGIRTF 850
Query: 620 VLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHS---KHLLNIQYRMHPSISLFPNL 676
V +GDE QL S S+ SLFER+ LN S H+L+ QYRMHP IS FP
Sbjct: 851 VFVGDEKQL-----SSFSNVPQLEMSLFERIL-LNGSYKNPHMLDTQYRMHPQISRFPIE 904
Query: 677 QFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCR--------NIV 728
+FY N++LDG + E++ G E Y F G E+ +++ R N
Sbjct: 905 KFYDNKLLDGV-----TEEQKKWPGIEHPLY-FHQCDKGLENKVFNYNRGSRGFTYTNKH 958
Query: 729 EVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ-----------VVAIRKKIGFEYE-- 775
EV ++K + +L + + IG+++PY+AQ +V +++ E E
Sbjct: 959 EVKEIVKFIYRLI--LEKNVPRTEIGIITPYSAQRDLISETLQKDLVVNPERLEMEREVD 1016
Query: 776 ----------------NKDGFTVK---------VKSIDGFQGGEEDIIIISTVRCNTGGS 810
+ DG V + +ID FQG E+ II S VR N
Sbjct: 1017 DLDLLNSRLRAKTSGLSNDGNKVNTINIINGVFISTIDSFQGHEKGFIIFSCVRNNKENK 1076
Query: 811 IGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
IGF+S +R+NVALTRA+H L ++G++ L +W + +
Sbjct: 1077 IGFVSDKRRMNVALTRAKHGLIMIGNKNILKKDTKLWASYI 1117
Score = 42.4 bits (98), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 236 LCSVQRKGQWDEKFGPSFSS-TLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
L V+ Q D K FS TLN+SQ A+ L + + ++ GPPGTGKT T
Sbjct: 633 LLGVKPVRQIDFKNRIQFSKETLNDSQKSAIQHVLN-------NSITILQGPPGTGKTST 685
Query: 295 VSMLLLTLLR--IKCRTLACTPTNVAITELASRVLK 328
+ ++L +++ L +N+AI +A ++L+
Sbjct: 686 IEEIILQMIKNFNSFPILCVAASNIAIDNIAEKLLE 721
>gi|224009021|ref|XP_002293469.1| hypothetical protein THAPSDRAFT_264090 [Thalassiosira pseudonana
CCMP1335]
gi|220970869|gb|EED89205.1| hypothetical protein THAPSDRAFT_264090 [Thalassiosira pseudonana
CCMP1335]
Length = 349
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/306 (33%), Positives = 159/306 (51%), Gaps = 25/306 (8%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDE-AGFGRSLFERLTS 652
+++DEA Q E ES IP + L+GD QLP + S S + F RSLFERL S
Sbjct: 44 VILDEACQASEPESLIPFKF-NPTTVTLVGDPQQLPVLTISGPSTQNCLFERSLFERLQS 102
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
LN LL QYRMH I+ FP+ +FY+ +++ +VK++S + + F T +F +
Sbjct: 103 LNWPVTLLREQYRMHQRIAEFPSKEFYQGKLITPDSVKNRSVS--WTSNPCFPTIAFWDT 160
Query: 713 IGG--REDFIYHSCRNIVEVSAVIKILQKL--YKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
G N EV + + + L Y+ + KVSIG++S Y QV I
Sbjct: 161 DGKLMSGSGGGFGYSNQEEVEFITRDILSLFTYEYLRNTDVKVSIGIISFYKEQVSIILL 220
Query: 769 KIGFEYE--------NKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-------GGSIGF 813
Y ++ ++KV ++DGFQG E DIII+S VR ++ ++GF
Sbjct: 221 LFAGIYWTLASVTALDQSRISIKVATVDGFQGSECDIIILSCVRSHSNRGGGNGRNNVGF 280
Query: 814 ISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKAR 873
++ +RVNVALTRA+ LWI+G+ L SS ++W L+ + + + + R++ A+
Sbjct: 281 LNDYRRVNVALTRAKCSLWIVGNSEVLKSS-NLWSKLIQHMEGEKALQRSSDFRSMF-AQ 338
Query: 874 LEVSKE 879
+ SKE
Sbjct: 339 WKASKE 344
>gi|410979396|ref|XP_003996071.1| PREDICTED: probable helicase senataxin [Felis catus]
Length = 2669
Score = 132 bits (333), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 149/287 (51%), Gaps = 35/287 (12%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 2166 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2224
Query: 650 LTSL--NHSKH---------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L + +H L +QYRMHP I LFP+ Y ++S +
Sbjct: 2225 FCKLLEDSVEHNVIGRLPVLQLTVQYRMHPDICLFPSNYVY-----------NRSLKTNR 2273
Query: 699 LTGT-------EFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKV 751
LT T F Y ++ G E S N+ E+ V++I+ KL K
Sbjct: 2274 LTETNRCSSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKDKRRDVTFR 2332
Query: 752 SIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGS 810
+IG+++ Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR N GS
Sbjct: 2333 NIGIITHYKAQKTMIQKDLDKEFDRKG--PAEVDTVDAFQGRQKDCVIVTCVRANAMQGS 2390
Query: 811 IGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
IGF++ QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 2391 IGFLASLQRLNVTITRAKYSLFILGHLRTLMENQH-WNHLIQDAQKR 2436
Score = 46.6 bits (109), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1952 LIHGPPGTGKSKTIVGLLYRLLTENQRKGRSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2011
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K P+ GDI L
Sbjct: 2012 IILEFKEKCK---DKKNPLGNCGDINL 2035
>gi|330796515|ref|XP_003286312.1| hypothetical protein DICPUDRAFT_150267 [Dictyostelium purpureum]
gi|325083739|gb|EGC37184.1| hypothetical protein DICPUDRAFT_150267 [Dictyostelium purpureum]
Length = 2271
Score = 132 bits (333), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 172/318 (54%), Gaps = 23/318 (7%)
Query: 594 LVIDEAAQLKESESTIPL-QLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS 652
++ID+A Q E + IPL + + +L+GD Q + SK S + G SLFERL+
Sbjct: 1512 IIIDDATQSCEISTIIPLASSSNVKKLILVGDPVQSLPKILSKDSVDNGINISLFERLSK 1571
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN-VKSKSYEKQYLTGTEFGTYSFIN 711
+L+ QYRMHPSIS F + FY ++ D N +++ + Q ++ F +
Sbjct: 1572 A-IDVQILDTQYRMHPSISHFSSKHFYSGKLKDSPNLIQNNTLFNQ---DQKYTPLEFYD 1627
Query: 712 IIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ--VVAIRKK 769
II +E+ + S +N E+ V +I++KL + K+ ++IG+++PY Q + + KK
Sbjct: 1628 IIDSQEEKCFGSIKNESEIETVFRIIKKLVQDNPKLKE-LTIGIITPYKLQRNELILSKK 1686
Query: 770 IGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
Y N+ +++ +IDGF G E+DIII S VR +GF++ ++N+A+TRA++
Sbjct: 1687 ----YFNQ-PIDIEINTIDGFHGVEKDIIIFSCVR---SERLGFLNDKSQINIAITRAKY 1738
Query: 830 CLWILGSERTLISSESIWGALV--CDAKARQCFFNADEERNLAKARLE---VSKELVEIG 884
L+I+G+ + L+ ++IW L+ + +N + +N +KA E + +E + G
Sbjct: 1739 GLFIIGN-KNLLEKDTIWSQLIKYISEIGKIQTYNIKDIKNFSKATKEFNILHQESLATG 1797
Query: 885 AESLTSTSQGGKKEEFEF 902
S T +G + + +F
Sbjct: 1798 EFSHFKTREGTRNQNEDF 1815
>gi|134046854|ref|YP_001098339.1| putative DNA helicase [Methanococcus maripaludis C5]
gi|132664479|gb|ABO36125.1| putative DNA helicase [Methanococcus maripaludis C5]
Length = 633
Score = 132 bits (333), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 142/267 (53%), Gaps = 33/267 (12%)
Query: 596 IDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNH 655
IDE +Q E S IP+ ++ ++ GD QLP V +SDE ++LFER+ + N
Sbjct: 385 IDEGSQSMEPSSLIPIVIS--RKLIIAGDHKQLPPTV---LSDELELKKTLFERMINENP 439
Query: 656 S-KHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK---------SYEKQYLTGTEFG 705
+L +QYRM+ I F N FY N+++ +VKS S E +Y+ +
Sbjct: 440 DFSKILQVQYRMNEKIMAFSNEMFYENKLIAHESVKSHNLLEIVENISNEDKYIINEK-- 497
Query: 706 TYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVA 765
+ FIN+ G + + S N+ E V++I+ KL K ++ + V++PY AQV
Sbjct: 498 SLQFINVDGEEKQDSFKSSYNVEEAEKVLEIVSKL------QKYEIPVSVITPYDAQVKY 551
Query: 766 IRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALT 825
I K + + + VKS+DGFQG E ++I+IS VR + +GF+ +R+NVA+T
Sbjct: 552 ISKMLNTD-------KIDVKSVDGFQGRENEVIVISFVRTD---KMGFLKDLRRLNVAVT 601
Query: 826 RARHCLWILGSERTLISSESIWGALVC 852
RAR L ++GS+ LI ++ L C
Sbjct: 602 RARRKLIVVGSKNLLIKDDAYSKFLNC 628
Score = 48.5 bits (114), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Query: 256 TLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPT 315
+LNE Q +L L G R + LI GPPGTGKT+T+S ++L + K + +A +
Sbjct: 171 SLNEYQQETVLEAL-----GARD-LYLIHGPPGTGKTRTISEVILQEVLRKNKVIATADS 224
Query: 316 NVAITELASRVLKLVKESYK 335
N+A+ + S + K ES+K
Sbjct: 225 NIAVDNILSNISKY--ESFK 242
>gi|429961769|gb|ELA41314.1| hypothetical protein VICG_01687 [Vittaforma corneae ATCC 50505]
Length = 575
Score = 132 bits (333), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 141/261 (54%), Gaps = 21/261 (8%)
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS 652
F++IDEA Q E S +P + +L+GD QL + +K + GF +SLFERL
Sbjct: 300 FVLIDEAVQSTEPLSLVPC-VYSPEKLILVGDHKQLGPTILNKDVVKYGFKQSLFERLLR 358
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ +LL++QYRMHP + FP+ FY N +L SK + +F +
Sbjct: 359 IGVMPYLLSVQYRMHPDLCAFPSEYFY-NGLLKSGTSTSKVLDL---------PNNFFYV 408
Query: 713 IGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
G+E+ S N E V I++ L+K V +Q IGV++PY Q I +I
Sbjct: 409 CDGKEEISQSRTSFFNKSEAVIVENIIRFLFKNGVLEQQ---IGVITPYEGQRSYILGQI 465
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHC 830
+ N+ G +++K++DGFQG E+D II+S VR N +GF+ +R+NV LTRA+H
Sbjct: 466 ---FGNEAG-NLEIKNVDGFQGREKDFIIVSLVRSNIFQGVGFVGDKRRMNVTLTRAKHG 521
Query: 831 LWILGSERTLISSESIWGALV 851
L I+G+ TL +E +W L+
Sbjct: 522 LIIIGNPFTLYKNE-MWADLL 541
Score = 45.1 bits (105), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 44/209 (21%)
Query: 142 EKVSDLRRVGRTWTFVSVTTVPDDED-ENKKENRYKVKARNNMQVHDKTKKSFFFIYLTN 200
E+ SDL RV + V ++P EN N Y V+ N +++ K + +Y
Sbjct: 80 EQFSDLIRVK-----IDVDSLPSGHTLENIPRNGYTVEFIWNPTTYNRMKNALQSLY--- 131
Query: 201 ILPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNES 260
NK+ N++ +K I L V+ + E F P LN+S
Sbjct: 132 ---NKKKSNTI-----FKYI---------------LKGVKETMKEIEVFQPKKFFALNQS 168
Query: 261 QVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLR-IKCRTLACTPTNVAI 319
Q A+ A L R + LI GPPGTGKT ++++ L++ + L P+N A
Sbjct: 169 QEIAVKAALTRT-------LTLIQGPPGTGKTMVSAVIVYNLVKHYGKKVLVVAPSNTAA 221
Query: 320 TELASRV----LKLVKESYKRDSRSNTPI 344
+LA ++ LK+++ KR +T +
Sbjct: 222 DQLAIKINDTGLKVLRIMSKRREDVSTDV 250
>gi|193786861|dbj|BAG52184.1| unnamed protein product [Homo sapiens]
Length = 562
Score = 132 bits (333), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 144/267 (53%), Gaps = 14/267 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVE-SKISDEAGFGRSLFERLTS 652
+V+DE +Q+ E S +P+ +L+GD QLP ++ S + E G ++LF+RL
Sbjct: 264 VVLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCL 323
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ H LL QYR HP+IS N FY+ +++G +S ++L T F N+
Sbjct: 324 MGHKPILLRTQYRCHPAISAIANDLFYKGALMNGVTEIERSPLLEWLP-----TLCFYNV 378
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI-G 771
G + +S N+ E + +K++Q L + + IGV++ Y +Q+ + +
Sbjct: 379 KGLEQIERDNSFHNVAEATFTLKLIQSLIASGIAGSM---IGVITLYKSQMYKLCHLLSA 435
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
++ + D TV+V ++D FQG E++III+S VR +GFI +R+NVALTR + L
Sbjct: 436 VDFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRGKRHL 492
Query: 832 WILGSERTLISSESIWGALVCDAKARQ 858
I+G+ L ++ +WG ++ + R+
Sbjct: 493 LIVGNLACLRKNQ-LWGRVIQHCEGRE 518
>gi|402594446|gb|EJW88372.1| hypothetical protein WUBG_00717 [Wuchereria bancrofti]
Length = 1089
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 153/295 (51%), Gaps = 26/295 (8%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E + + + G+ VL+GD CQL ++ K + +AG +SLFERL L
Sbjct: 597 VLIDESTQATEPEVMVAV-VCGVRQLVLVGDHCQLGPVIMCKKAAKAGLSQSLFERLVLL 655
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF------GTY 707
+ L +QYRMHP++S FP+ FY + +G E+Q L G ++
Sbjct: 656 GNRPIRLQVQYRMHPALSSFPSNVFYEGSLQNG--------ERQ-LIGIDWQWPVPDKPM 706
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---V 763
F + G E S N E + V K+ + KA + +Q IG+++PY Q +
Sbjct: 707 MFWSCYGQEELSSSGTSFLNRTEAANVEKLATRFLKAGIKPEQ---IGIITPYEGQRSYI 763
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
V + G +K ++V ++D FQG E+DIII++ VR N IGF++ +R+NVA
Sbjct: 764 VQFMQTQG-ALHSKLYLEMEVANVDAFQGREKDIIIVTCVRSNDHQGIGFLNDSRRLNVA 822
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
LTRA+ L I+G+ + L S +W L+ K + C NL + + +SK
Sbjct: 823 LTRAKFGLIIVGNAKVL-SRHPLWNYLLSMFKEKGCLVEG-PLNNLKPSPITLSK 875
Score = 54.7 bits (130), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 33/209 (15%)
Query: 150 VGRTWTFVS-VTTVPDDE-DENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRI 207
G W+ V V +PD+ DE E R +KA N V T+ +F ++ N +R+
Sbjct: 333 AGGEWSSVGCVIKIPDNHNDEVGIEMR--LKAEN---VPTDTRTNFTCEFVWNSTSFERM 387
Query: 208 WNSLHMCGNWK------VITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQ 261
+L + G + + +++G D +D+ + K ++F LN SQ
Sbjct: 388 QAALSLLGQDEDCVSQFIYHKLMGHD--IDD------IIFKVSLPKRFSVPGLPELNHSQ 439
Query: 262 VGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLR-IKCRTLACTPTNVAIT 320
V A+ L+R + LI GPPGTGKT T + ++ L++ + L C P+N+A+
Sbjct: 440 VHAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLVKQTNGQVLVCAPSNIAVD 492
Query: 321 ELASRV----LKLVKESYKRDSRSNTPIC 345
+LA ++ LK+V+ K ++P+
Sbjct: 493 QLAEKIHRTGLKVVRLCAKSRETLDSPVA 521
>gi|440898219|gb|ELR49762.1| hypothetical protein M91_07236, partial [Bos grunniens mutus]
Length = 1039
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 142/267 (53%), Gaps = 14/267 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVE-SKISDEAGFGRSLFERLTS 652
+V+DE +Q+ E S +P+ +L+GD QLP ++ S + E G ++LF+RL
Sbjct: 744 VVLDECSQMTEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCL 803
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ H LL QYR HP+IS N FY +++G + +S ++L T F N+
Sbjct: 804 MGHKPILLRTQYRCHPTISAIANDLFYEGNLMNGISETERSPLLEWLP-----TLCFYNV 858
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI-G 771
G + +S N+ E + +K++Q L + + IGV++ Y +Q+ + +
Sbjct: 859 KGLEQIERGNSFHNVAEAAFTLKLIQSLIASGIAGSM---IGVITLYKSQMYKLCHLLSA 915
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
++++ + V+V ++D FQG E++III+S VR +GFI +R+NVALTR R L
Sbjct: 916 MDFDHPNLKAVQVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRGRRHL 972
Query: 832 WILGSERTLISSESIWGALVCDAKARQ 858
I+G+ L +WG ++ + R+
Sbjct: 973 LIVGNLACL-RKNRLWGRVIQHCEGRE 998
>gi|393911179|gb|EFO25239.2| nonsense mRNA reducing factor 1 NORF1 [Loa loa]
Length = 1059
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 153/295 (51%), Gaps = 22/295 (7%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E + + + G+ VL+GD CQL ++ K + +AG +SLFERL L
Sbjct: 597 VLIDESTQATEPEVMVAV-VCGVRQLVLVGDHCQLGPVIMCKKAAKAGLSQSLFERLVLL 655
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF------GTY 707
+ L +QYRMHP++S FP+ FY + +G E+Q L G ++
Sbjct: 656 GNRPIRLQVQYRMHPALSSFPSNVFYEGSLQNGVT----EGERQ-LIGIDWQWPVPDKPM 710
Query: 708 SFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---V 763
F + G E S N E + V K+ + KA + +Q IG+++PY Q +
Sbjct: 711 MFWSCYGQEELSSSGTSFLNRTEAANVEKLATRFLKAGIKPEQ---IGIITPYEGQRSYI 767
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVA 823
V + G +K ++V ++D FQG E+DIII++ VR N IGF++ +R+NVA
Sbjct: 768 VQFMQTQG-ALHSKLYLEMEVANVDAFQGREKDIIIVTCVRSNDHQGIGFLNDSRRLNVA 826
Query: 824 LTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
LTRA+ L I+G+ + L S +W L+ K + C NL + + +SK
Sbjct: 827 LTRAKFGLIIVGNAKVL-SRHPLWNYLLSVFKEKGCLVEG-PLNNLKPSPITLSK 879
Score = 54.3 bits (129), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 115/249 (46%), Gaps = 42/249 (16%)
Query: 150 VGRTWTFVS-VTTVPDDE-DENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRI 207
G W+ + V +PD+ DE E R +KA N V T+ +F ++ N R+
Sbjct: 333 AGGEWSSIGCVIKIPDNHNDEVGIEMR--LKAEN---VPTDTRTNFTCEFVWNSTSFDRM 387
Query: 208 WNSLHMCGNWK------VITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQ 261
+L + G + + +++G D +D+ + K ++F LN SQ
Sbjct: 388 QAALSLLGQDEDCVSQFIYHKLMGHD--IDD------IIFKVSLPKRFSVPGLPELNHSQ 439
Query: 262 VGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLR-IKCRTLACTPTNVAIT 320
V A+ L+R + LI GPPGTGKT T + ++ L++ + L C P+N+A+
Sbjct: 440 VHAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYHLVKQTNGQVLVCAPSNIAVD 492
Query: 321 ELASRV----LKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKK 376
+LA ++ LK+V+ K ++P+ ++LK G E+ +++++
Sbjct: 493 QLAEKIHRTGLKVVRLCAKSRETLDSPVA------FLALHNQLKALHGAAEL---HKLQQ 543
Query: 377 LRECFAPLS 385
L+E L+
Sbjct: 544 LKEEIGELA 552
>gi|160331663|ref|XP_001712538.1| sen1 [Hemiselmis andersenii]
gi|159765987|gb|ABW98213.1| sen1 [Hemiselmis andersenii]
Length = 738
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 160/298 (53%), Gaps = 14/298 (4%)
Query: 568 KRASLFFST-ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDEC 626
K++ L ++T A +SY + ++K L+IDEAAQ E + +P++ N +LIGD
Sbjct: 404 KKSKLIYTTLACASYTFLN-KVKKKETLIIDEAAQAIELSTLVPVRKTCEN-LILIGDIQ 461
Query: 627 QLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG 686
QLPA + S+ S + + RSLF+RL + L Q+RMHP IS F + +FY+N + D
Sbjct: 462 QLPATIFSQSSLDLNYERSLFKRLQLKKFPIYFLETQFRMHPQISSFVSRKFYKNGLNDS 521
Query: 687 ANVKSKSYEKQYLTGTEFGTYSFINIIGGREDF---IYHSCRNIVEVSAVIKILQKLYKA 743
VK K +L FG F + G ++F +S N+ E+ + I + L
Sbjct: 522 QMVK-KVQNFHFLRC--FGPILFFDASEGLDNFHKKQKNSWCNLEEIRIISFIFRSLICL 578
Query: 744 WVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTV 803
+ + SIG++S Y QV I++ + G ++ ++DGFQG E++III STV
Sbjct: 579 FTNLNLR-SIGIISSYQGQVSEIQENNILKRSELKG---QINTVDGFQGREKNIIIFSTV 634
Query: 804 RCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFF 861
R IGF+S +R+NVA TRA+ W +G + +++ ++ W + D + R FF
Sbjct: 635 RARNERGIGFLSDCRRMNVAFTRAKFSFWGVG-KASVLKKDTNWFEGLFDFRKRGRFF 691
>gi|410076224|ref|XP_003955694.1| hypothetical protein KAFR_0B02620 [Kazachstania africana CBS 2517]
gi|372462277|emb|CCF56559.1| hypothetical protein KAFR_0B02620 [Kazachstania africana CBS 2517]
Length = 1164
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 160/338 (47%), Gaps = 60/338 (17%)
Query: 569 RASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 628
+A + F+T ++ IK + +++DE+ Q E+ + +PL L GI V +GDE QL
Sbjct: 838 QAQIIFTTNITAGGRQLKAIKEVPVVIMDESTQSSEASTLVPLSLPGIKSFVFVGDEKQL 897
Query: 629 PAMVESKISDEAGFGRSLFER--LTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG 686
S S+ SLFER L S +L++QYRMHP IS FP L+FY+NQ+ DG
Sbjct: 898 -----SSFSNVPQLELSLFERVLLNGSYKSPIMLDVQYRMHPKISEFPILKFYKNQLKDG 952
Query: 687 ANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNI--------VEVSAVIKILQ 738
+++ G + + F G+E + N+ E ++KIL
Sbjct: 953 VTEVDRAW-----PGITYPLF-FYQCDRGKESVTVNRRNNLSALTYINQYECQEIVKILY 1006
Query: 739 KLYKAWVGSKQKVS---IGVVSPYTAQVVAIRKKI------------------GFEYENK 777
KL ++ VS IG+++PY+AQ + K + E+ NK
Sbjct: 1007 KLI-----LEKNVSLDEIGIITPYSAQRDLLSKVLLEDDIINPEGKAMEQQNDEAEFLNK 1061
Query: 778 DGFTVKVKS-------------IDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
+ V+S +D FQG E++ II S VR N IGF+ +R+NVAL
Sbjct: 1062 NNVDYSVQSHVVNIINGLHVATVDSFQGHEKNFIIFSCVRNNAENKIGFLRDERRLNVAL 1121
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCFFN 862
TRAR+ L I+G++ L + + +W V + + FN
Sbjct: 1122 TRARNGLIIVGNKHVLKAGDKLWREFVTFLEDKGVIFN 1159
>gi|344304991|gb|EGW35223.1| hypothetical protein SPAPADRAFT_53535 [Spathaspora passalidarum
NRRL Y-27907]
Length = 685
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 160/305 (52%), Gaps = 28/305 (9%)
Query: 559 KLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQL-AGIN 617
K+V E R + S SY+L + ++ + ++IDE +Q E + IPL L
Sbjct: 360 KIVHELLINARVVVATLHGSGSYELRTNDL-AFDTIIIDEVSQSMEPQCWIPLLLNTKFK 418
Query: 618 HAVLIGDECQLPAMVES-KISDEAGFGRSLFERLT---SLNHSKHLLNIQYRMHPSISLF 673
V+ GD QLP V+S K + +LF+RL N K LL++QYRM+ SI +F
Sbjct: 419 RLVIAGDNMQLPPTVKSVKRKGSSILETTLFDRLVLKGEGNKFKKLLDVQYRMNTSIMMF 478
Query: 674 PNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII-----GGR------EDFIYH 722
PN+Q Y N++ ++V++ + + L G E + I GG E
Sbjct: 479 PNMQLYSNKLKSDSSVENITLSE--LPGVEENDDTLCKCIWYDTQGGEFPEQVSESVEGD 536
Query: 723 SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTV 782
S N +E+ V ++KL V K IGV++PY AQV ++K++G E E +
Sbjct: 537 SKYNEMELLVVRGHIEKLLSDGVQPK---DIGVIAPYAAQVQLLKKQMGPETE------I 587
Query: 783 KVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLIS 842
++ ++DGFQG E+++II++ VR N IGF+S +R+NVA+TR + L ++G + S
Sbjct: 588 EISTVDGFQGREKEVIILTLVRSNESREIGFLSDQRRLNVAITRPKRQLCVIGDLELMSS 647
Query: 843 SESIW 847
S SI+
Sbjct: 648 SGSIF 652
Score = 49.7 bits (117), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 253 FSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLAC 312
F+S LN+SQ A+ + ++S + +I GPPGTGKT T+ L+ L + + L C
Sbjct: 211 FNSHLNDSQKQAIEFAI------NKSNITIIHGPPGTGKTYTLIELIQQLTNLGEKVLVC 264
Query: 313 TPTNVAITELASRV 326
P+N+++ + R+
Sbjct: 265 GPSNISVDTILERL 278
>gi|183229840|ref|XP_657569.2| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|169803118|gb|EAL52192.2| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 966
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 152/282 (53%), Gaps = 29/282 (10%)
Query: 595 VIDEAAQLKESESTIPLQLAGI---NHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT 651
++DEAAQ E E+ LAGI VLIGD QL S + EAGF +S+FER
Sbjct: 651 IVDEAAQSLEPET-----LAGIINVRKTVLIGDIQQLQPTCLSTEAREAGFQKSMFERFM 705
Query: 652 SLNHSKH-LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYS-- 708
+ K +L QYRMHP+IS F N FY +++ +G ++ + ++ + + F Y+
Sbjct: 706 ANTQIKRTMLKTQYRMHPAISEFSNKMFYSSKLENGVSIDDR-FDNRIINF--FPDYTNP 762
Query: 709 --FINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSK-QKVSIGVVSPYTAQVVA 765
FIN G Y S + ++I+Q++ + + + ++ IG++SPY AQ
Sbjct: 763 IMFINCDGTEH---YGSSGTSYNNAGEVQIIQEVVEKLLNNDIEENEIGIISPYQAQQEL 819
Query: 766 IRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALT 825
I + + + +KV +IDGFQG E++ II S VR N +GF++ +R+NVALT
Sbjct: 820 ISQYVSTK--------IKVANIDGFQGNEKEYIIFSCVRSNQTLGVGFVNDYKRLNVALT 871
Query: 826 RARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEER 867
RA+ L I+G+ TL++S+ +W L+ ++ F E +
Sbjct: 872 RAKRGLIIIGNIPTLVTSK-VWNMLIHHFYLKKALFELKEHK 912
>gi|70936507|ref|XP_739189.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56515997|emb|CAH74375.1| hypothetical protein PC000066.00.0 [Plasmodium chabaudi chabaudi]
Length = 418
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 137/262 (52%), Gaps = 12/262 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE AQ E + IPL N VLIGD QLP + S + + G +SL ER
Sbjct: 59 VIIDECAQSIEPSNLIPLGHYCTN-LVLIGDHKQLPPTIISPDAIKLGLDKSLLERFVMA 117
Query: 654 NHSK-HLLNIQYRMHPSISLFPNLQFYRNQILDGANV--KSKSYEKQYLTGTEFGTYSFI 710
+ HLL+ Q RMH SI FPN FY N+ L ANV +++ K +L FI
Sbjct: 118 KIAPIHLLSTQRRMHLSICTFPNFHFYDNK-LKTANVTEENRPIIKGFLWPNPKCRLVFI 176
Query: 711 NIIGGR-----EDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVA 765
++ G+ E+ S N+ E+ +I +L+ + G IG+++ Y AQ +
Sbjct: 177 DVSLGKPGSKFENAYGTSKFNLYEIEPLIAVLKSIVNE--GCVSVDEIGILTAYDAQKIK 234
Query: 766 IRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALT 825
++K + + + +++ SIDGFQG E+D+I+ S VR N +GF+ +R+NV LT
Sbjct: 235 LKKAVQEAFPYEAAHRIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLRDARRLNVMLT 294
Query: 826 RARHCLWILGSERTLISSESIW 847
RA+ + I G + TL + + W
Sbjct: 295 RAKRGVIIFGDQFTLANDPANW 316
>gi|380772504|gb|AFE61892.1| hypothetical protein [Mus musculus]
Length = 1843
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 141/267 (52%), Gaps = 14/267 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVE-SKISDEAGFGRSLFERLTS 652
+V+DE +Q+ E S +P+ +L+GD QLP ++ S + E G ++LF+RL
Sbjct: 1547 VVLDECSQMTEPASLLPIARFQCEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCL 1606
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ H LL QYR HP+IS N FY +++G + + + ++L T F N+
Sbjct: 1607 MGHKPVLLRTQYRCHPAISAIANDLFYEGSLVNGISERERGPVLEWLP-----TLCFYNV 1661
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI-G 771
G + +S N+ E + +K++Q L + + S IGV++ Y +Q+ I +
Sbjct: 1662 TGAEQVERENSFVNVAEATFTLKLIQSLMASGIES---CMIGVITLYKSQMYKICNLLSA 1718
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
+ + D V+V ++D FQG E++I I+S VR +GFI +R+NVALTR R L
Sbjct: 1719 VDVGHPDVKAVQVSTVDAFQGAEKEITILSCVRTR---QVGFIDSEKRMNVALTRGRRHL 1775
Query: 832 WILGSERTLISSESIWGALVCDAKARQ 858
I+GS + + +WG ++ + R+
Sbjct: 1776 LIVGS-LSCLRKNRLWGRVIQHCEGRE 1801
>gi|328711753|ref|XP_001947351.2| PREDICTED: probable helicase senataxin-like [Acyrthosiphon pisum]
Length = 414
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 172/345 (49%), Gaps = 52/345 (15%)
Query: 542 RNLWNSLDELNLPCTTSKLV-------LEDFCFKRASLFFSTASSSY-KLHSVEIKPLNF 593
+ + N L+E N C ++ L LE+ + +T +S + K KP N
Sbjct: 72 QKMGNPLNEANRQCQSNNLFIYTNKKDLENEILINTEVIVTTLNSCFSKTMEETFKPTNI 131
Query: 594 ----------LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFG 643
++DEA Q E +P+ L GI+ +L+GD+ QL +V+SK++ + G G
Sbjct: 132 KSLNNCHFTACIVDEAGQSIEPLIFVPI-LLGIDKLILVGDDKQLQPLVKSKVAKDNGLG 190
Query: 644 RSLFERLTSLNHSKH---------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSY 694
SLF+RL + K +LN QYRMH I LFP+ FY+ +I +VK +
Sbjct: 191 ISLFKRLKTWFEQKRSTRKSFPVTMLNTQYRMHKEICLFPSKYFYKGEIKTAPSVKMR-- 248
Query: 695 EKQYLTGTEFGTYSFINIIGGREDFIYHSCR-NIVEVSAVIKILQKLYKAWVGSKQKVSI 753
KQ F Y +I E ++ NI E + ++ ++ L + S +++
Sbjct: 249 -KQL----SFHPY----MILEHESLQDNTGEVNIGEANMIVTLVDILLNSECRS---LTV 296
Query: 754 GVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGF 813
V++PY Q R++I + K ++ V +ID FQGGE D+++ISTVR N +GF
Sbjct: 297 AVLTPYHKQ----REQINILLKKKK-ISLNVNTIDSFQGGECDVLLISTVRTN---GVGF 348
Query: 814 ISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQ 858
+ R+NVALTRA+ L I G+ +L E +W L+ DAK R+
Sbjct: 349 MDDICRLNVALTRAKQSLIICGNFMSL-RGERVWSDLIEDAKERK 392
>gi|440300434|gb|ELP92903.1| hypothetical protein EIN_312750 [Entamoeba invadens IP1]
Length = 1343
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 148/276 (53%), Gaps = 23/276 (8%)
Query: 595 VIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLN 654
VIDE+AQ E E+ + + AVLIGD QLP V S + G +S+FERL
Sbjct: 660 VIDESAQSIEPETF--SGIMNVQKAVLIGDIQQLPPTVVSNEAKNGGLEKSMFERLLQNG 717
Query: 655 HSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK--QYLTGTEFGTYSFINI 712
+ LL QYRMHP+IS FPN FY +++DG + + E+ EF F++
Sbjct: 718 VAYALLTTQYRMHPAISQFPNNNFYNGKLVDGVDEDDRFDERIEGLFPNNEFPVM-FVHC 776
Query: 713 IGGREDFIYHSCR---NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKK 769
G ++F S + N E V +++KL + + + IG++SPY Q R+
Sbjct: 777 KG--DEFYGTSGKSYGNDEEKKVVKFMVKKLNEKNIRDDE---IGIISPYATQ----REL 827
Query: 770 IGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+G E++ T++V S+DGFQG E+ IIIS VR N IGF+ +R+NV+LTRA++
Sbjct: 828 LGEEHK-----TIEVSSVDGFQGNEKPFIIISCVRSNENRGIGFVGDHRRLNVSLTRAKY 882
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADE 865
L I+G TL+ + I+ L+ + CF A E
Sbjct: 883 GLVIIGDAYTLMIN-PIFKNLMKFLYDKNCFVVAKE 917
>gi|344254581|gb|EGW10685.1| Uncharacterized protein FLJ44066 [Cricetulus griseus]
Length = 351
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 142/267 (53%), Gaps = 14/267 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVE-SKISDEAGFGRSLFERLTS 652
+V+DE +Q+ E S +P+ +L+GD QLP ++ S + E G ++LF+RL
Sbjct: 55 VVLDECSQMTEPASLLPIARFESEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCL 114
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ H +L QYR HP IS N FY +++G + +S ++L T F N+
Sbjct: 115 MGHKPVVLRTQYRCHPVISAIANDLFYEGNLMNGISETERSPVVEWLP-----TLCFYNV 169
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI-G 771
G + +S +N+ E + +K++Q L + + IGV++ Y +Q+ I +
Sbjct: 170 TGAEQVERENSFQNVAEAAFTLKLIQSLIASGIAGSM---IGVITLYKSQMYKICHLLSA 226
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
++ + + V+V ++D FQG E++III+S VR +GFI +R+NVALTR+R L
Sbjct: 227 MDFNHPEAKAVQVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRSRRHL 283
Query: 832 WILGSERTLISSESIWGALVCDAKARQ 858
I+GS + + +W ++ + R+
Sbjct: 284 LIVGS-LSCLRKNRLWERVIQHCEGRE 309
>gi|332820104|ref|XP_517401.3| PREDICTED: uncharacterized protein LOC461442 [Pan troglodytes]
Length = 2104
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 142/267 (53%), Gaps = 14/267 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVE-SKISDEAGFGRSLFERLTS 652
+V+DE +Q+ E S +P+ +L+GD QLP ++ S + E G ++LF+RL
Sbjct: 1806 VVLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCL 1865
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ H LL QYR HP+IS N FY+ +++G +S ++L T F N+
Sbjct: 1866 MGHKPILLRTQYRCHPAISAIANDLFYKGALMNGVTEIERSPLLEWLP-----TLCFYNV 1920
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI-G 771
G + +S N+ E + +K++Q L + + IGV++ Y +Q+ + +
Sbjct: 1921 KGLEQIERDNSFHNVAEATFTLKLIQSLIASGIAGSM---IGVITLYKSQMYKLCHLLSA 1977
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
++ + D TV+V ++D FQG E++III+S VR +GFI +R+NVALTR + L
Sbjct: 1978 VDFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRGKRHL 2034
Query: 832 WILGSERTLISSESIWGALVCDAKARQ 858
I+G+ + +WG ++ + R+
Sbjct: 2035 LIVGN-LACLRKNRLWGRVIQHCEGRE 2060
>gi|406662219|ref|ZP_11070322.1| putative DNA helicase [Cecembia lonarensis LW9]
gi|405553902|gb|EKB49075.1| putative DNA helicase [Cecembia lonarensis LW9]
Length = 659
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/324 (35%), Positives = 170/324 (52%), Gaps = 36/324 (11%)
Query: 566 CFKRASLFFST--ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIG 623
F++ +F ST +S+ L ++ P+ F IDEAAQ E+ S IP+Q A V+ G
Sbjct: 355 VFQQTQVFASTLVGASNSVLKGMKF-PIVF--IDEAAQGLEAASWIPIQKA--LKVVMAG 409
Query: 624 DECQLPAMVESKISDEAGFGRSLFERLTSLN-HSKHLLNIQYRMHPSISLFPNLQFYRNQ 682
D CQLP ++S + +AG +LFE++T +L +QYRM I F N FY+N+
Sbjct: 410 DHCQLPPTIKSYEAAKAGLSETLFEKVTKRQPQVTKMLQLQYRMPELIMGFSNKIFYQNE 469
Query: 683 ILDGANVKSKSYEKQYLTGTEFGTYSFINIIG-GREDFIYH---SCRNIVEVSAVIKILQ 738
+ GA +K+ E +L+ E FI+ G G + I S N E ++ L+
Sbjct: 470 L--GA---AKNTESHFLSEGE-PVLEFIDTAGSGFVEAIEEESLSTFNQEEARFALQYLE 523
Query: 739 KLYKAWVGSK---QKVSIGVVSPYTAQVVAIRKKI--GFEYENKDGFT--VKVKSIDGFQ 791
L K +K ++ +IG+++PY AQV + + + + N F + + SIDGFQ
Sbjct: 524 DLLKRTGIAKIKEKRWTIGLIAPYRAQVRKFNELLFESYAFPNLRSFPELLTIDSIDGFQ 583
Query: 792 GGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
G E DII+IS VR N G IGF++ +R+NVALTRA+ L ++G TL S S + A
Sbjct: 584 GQERDIILISLVRSNAKGEIGFLADTRRMNVALTRAKRKLVVIGDSATL-SHHSFYNA-- 640
Query: 852 CDAKARQCFFNADEERNLAKARLE 875
FF+ EE N K+ E
Sbjct: 641 --------FFDYVEENNCYKSVYE 656
Score = 44.7 bits (104), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTN 316
LN SQ A+ D V +I GPPGTGKT T+ ++ L+ + L C P+N
Sbjct: 200 LNPSQQAALQLVSAAKD------VAIIHGPPGTGKTTTLVQAVIGSLQQHAQVLVCAPSN 253
Query: 317 VAITELASRV 326
A+ L ++
Sbjct: 254 AAVDLLVEKI 263
>gi|330040413|ref|XP_003239900.1| component of a tRNA splicing complex, sen1 [Cryptomonas paramecium]
gi|327206826|gb|AEA39002.1| component of a tRNA splicing complex, sen1 [Cryptomonas paramecium]
Length = 680
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 142/274 (51%), Gaps = 19/274 (6%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
LV+DEAAQ E + + ++ V++GD QLPA V SK S G+ SLF+RL
Sbjct: 368 LVLDEAAQAIEINNLMCVKNIS-KKLVMVGDVQQLPAFVFSKHSAFFGYDVSLFKRLQLQ 426
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
++ L IQYRMHP IS FP +FY+N I D V S S +L F ++F ++
Sbjct: 427 KYAICFLEIQYRMHPQISSFPARKFYKNGIKDS--VLSDSENLYFLRC--FSPFNFFDVS 482
Query: 714 GGRE------DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
E +F + + I ++ I++L+ ++ + S G++S Y QV I+
Sbjct: 483 DSLENAHLKNEFSWCNLDEIRVINLFIQLLKYTHQKFNAQ----SFGIISGYEGQVDEIQ 538
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRA 827
E +K+ K +ID FQG E+D II S VR IGF+S +R+NVA TRA
Sbjct: 539 NYFCNEKISKEK---KTNTIDSFQGKEKDFIIFSCVRSRFKSGIGFLSDCRRINVAFTRA 595
Query: 828 RHCLWILGSERTLISSESIWGALVCDAKARQCFF 861
+ W +G+ +L S W ++ D+K R FF
Sbjct: 596 KKYFWCIGNSTSL-SKNPTWKEILSDSKRRLKFF 628
>gi|167386218|ref|XP_001737669.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165899439|gb|EDR26028.1| hypothetical protein EDI_014080 [Entamoeba dispar SAW760]
Length = 964
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 149/277 (53%), Gaps = 31/277 (11%)
Query: 595 VIDEAAQLKESESTIPLQLAGI---NHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT 651
++DEAAQ E E+ LAGI AVLIGD QL S + EAGF +S+FER
Sbjct: 643 IVDEAAQSLEPET-----LAGIINVRKAVLIGDIQQLQPTCLSTEAREAGFQKSMFERFM 697
Query: 652 SLNHSKH-LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYS-- 708
+ K +L QYRMHP+I F N FY +++ +G + + + ++ + + F Y+
Sbjct: 698 ANTQIKRTMLKTQYRMHPAIVEFSNKMFYSSKLENGVSNEDR-FDSRIINF--FPDYTNP 754
Query: 709 --FINIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVV 764
FIN GRE + S N EV + +I+ L K V + IG++SPY AQ
Sbjct: 755 IMFINC-DGREQYGSSGTSYNNEGEVLIIKQIVDGLLKNKVKENE---IGIISPYQAQQE 810
Query: 765 AIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
I + I + +KV +IDGFQG E++ II S VR N IGF+S +R+NVAL
Sbjct: 811 LISQYISTK--------IKVANIDGFQGNEKEYIIFSCVRSNQTLGIGFVSDYKRLNVAL 862
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCFF 861
TRA+ L ++G+ +TLI S+ +W L+ R F
Sbjct: 863 TRAKCGLIVIGNIQTLIGSK-VWDMLIHHFYLRDALF 898
>gi|28386070|gb|AAH46382.1| Setx protein [Mus musculus]
Length = 902
Score = 132 bits (331), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 150/282 (53%), Gaps = 25/282 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 406 PFSCVIVDEAGQSCEVETLSPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 464
Query: 650 LTSL---NHSKHL--------LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L N +++ L IQYRMHP I LFP+ Y N+K+ +
Sbjct: 465 FCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVY------NKNLKTNRLTESI 518
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
+E F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 519 RCSSEWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGII 577
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D II++ VR + GSIGF++
Sbjct: 578 THYKAQKTMIQKDLEKEFDKKG--PAEVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLA 635
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 636 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WYELIQDAQKR 676
Score = 46.2 bits (108), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 52/115 (45%), Gaps = 23/115 (20%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 192 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENFNAKIKQNRVLVCAPSNAAVDELMKK 251
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYL----NYRIKK 376
++ KE K P+ GDI L +N + L N+R+KK
Sbjct: 252 IILEFKEKCK---DKKNPLGNCGDINLVRLGPEKSINTEVLKFSLDSQVNHRMKK 303
>gi|291228829|ref|XP_002734380.1| PREDICTED: regulator of nonsense transcripts 1-like [Saccoglossus
kowalevskii]
Length = 2720
Score = 132 bits (331), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 150/305 (49%), Gaps = 37/305 (12%)
Query: 595 VIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLN 654
+IDEA E E+ +PL A VLIGD QL +V +S++ G G SL ER N
Sbjct: 2427 IIDEAGMCTEPETLVPLVRANPEQVVLIGDHRQLQPIVTHNLSNQMGLGVSLLERYCDQN 2486
Query: 655 HSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFG----TYSFI 710
H L IQYRMH +I FPN QFY + V +S K + G G F
Sbjct: 2487 HFIR-LKIQYRMHNAICEFPNNQFYDGDLETAETVLKRSQLKTTMDGVWPGGKHVPTVFC 2545
Query: 711 NIIGGREDFIY-------HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQV 763
+ +G E HS +N+ EV V++I + L + +K ++ I +S Y AQ
Sbjct: 2546 HSVGKEESLKVTTDEGSEHSKKNLQEVKDVVRIAKILTTKYGLAKSRIQI--LSQYRAQC 2603
Query: 764 VAIRKKI-GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC---------NTGG---- 809
I ++ G +N + V S+ GFQG E+D II+STVR T G
Sbjct: 2604 HEITGELKGVNCQN-----IGVNSVIGFQGSEQDYIILSTVRSLPQREIEERPTKGWLKK 2658
Query: 810 SIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNL 869
++GF++ ++NVALTRAR L I+G+ L+ ++ W L+ + + + C +A RN
Sbjct: 2659 NLGFVTDEHQINVALTRARKGLIIIGNA-NLLRTDYNWRRLLEEYRRKNCCVDA---RNF 2714
Query: 870 AKARL 874
++L
Sbjct: 2715 PSSKL 2719
>gi|355749514|gb|EHH53913.1| hypothetical protein EGM_14627, partial [Macaca fascicularis]
Length = 1042
Score = 132 bits (331), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 142/267 (53%), Gaps = 14/267 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVE-SKISDEAGFGRSLFERLTS 652
+V+DE +Q+ E S +P+ +L+GD QLP ++ S + E G ++LF+RL
Sbjct: 744 VVLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCL 803
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ H LL QYR HP+IS N FY+ +++G +S ++L T F N+
Sbjct: 804 MGHKPILLRTQYRCHPAISAIANDLFYKGTLMNGVTEIERSPLLEWLP-----TLCFYNV 858
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI-G 771
G + +S N+ E + +K++Q L + + IGV++ Y +Q+ + +
Sbjct: 859 KGLEQIERDNSFHNVAEATFTLKLIQSLIASGIAGSM---IGVITLYKSQMYKLCHLLSA 915
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
++ + D TV+V ++D FQG E++III+S VR +GFI +R+NVALTR + L
Sbjct: 916 VDFGHPDIKTVQVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRGKRHL 972
Query: 832 WILGSERTLISSESIWGALVCDAKARQ 858
I+G+ L +WG ++ + R+
Sbjct: 973 LIVGNLACL-RKNRLWGRVIQHCEGRK 998
>gi|224373108|ref|YP_002607480.1| putative DNA helicase [Nautilia profundicola AmH]
gi|223589915|gb|ACM93651.1| putative DNA helicase [Nautilia profundicola AmH]
Length = 648
Score = 132 bits (331), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 172/319 (53%), Gaps = 21/319 (6%)
Query: 535 SECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFL 594
+E L + +N+ DE N ++ +++D + A + F+T S+ +E + + +
Sbjct: 326 AEWLKIQKNINKLFDEKN---KKTQEIMDD-ILENAQIVFATNSACGG-EFLEEREFDTV 380
Query: 595 VIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL- 653
IDEAAQ E + IP+ + G + GD QLP + +S++ SLFER + L
Sbjct: 381 FIDEAAQAMEPSTLIPM-IKG-KQIIFAGDHKQLPPTI---LSNDERLKVSLFERFSELY 435
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYL-TGTEFGTYSFINI 712
+ H L IQYRM+ I+ FP+ +FY ++ +K+ + + + +E+G Y +
Sbjct: 436 PKAVHTLGIQYRMNEKINEFPSCKFYDCKVKTYEEIKNITIKDLNIQPDSEYGDYEPVVF 495
Query: 713 IGGREDFIYHSCR------NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
I F+ S + N E V+ +++KL K G+K++ IG+++PY I
Sbjct: 496 IDTCGKFMEKSKKDSPSKYNPKEAEFVVSLVEKLLKN--GAKEE-HIGIITPYKDHEEYI 552
Query: 767 RKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTR 826
+K I + ++VKS+DGFQG E++III+S VR N IGF+S +R+NVA+TR
Sbjct: 553 KKVISSHLHDFTTSLLEVKSVDGFQGREKEIIILSLVRANEKEEIGFLSDIRRLNVAITR 612
Query: 827 ARHCLWILGSERTLISSES 845
A+ L I+G +TL+ +++
Sbjct: 613 AKRKLVIIGDAKTLLVNDT 631
>gi|399949986|gb|AFP65642.1| component of a tRNA splicing complex, sen1 [Chroomonas
mesostigmatica CCMP1168]
Length = 753
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 143/281 (50%), Gaps = 12/281 (4%)
Query: 597 DEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHS 656
DEAAQ E + P++ +L+GD QLPA V S+ S + RSLF+RL
Sbjct: 448 DEAAQAIELSTLSPIR-NTCKKLILVGDIQQLPATVFSQTSLNFDYDRSLFKRLQIKKFP 506
Query: 657 KHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGR 716
L QYRMHP IS F +FY+N + D NV S Q+L G FG F ++ G
Sbjct: 507 IWFLETQYRMHPQISSFIARKFYKNGLKDSENV-SLLKNFQFLRG--FGPLIFFDVCEGN 563
Query: 717 EDFIY---HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFE 773
+ F +S N+ E+ V I++ + + + SIG+++ Y Q+ + F
Sbjct: 564 DRFHLKQKNSWCNLDEIRLVSFIIRGIICIFSNLSWR-SIGIIASYQGQIGEFQ---DFG 619
Query: 774 YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWI 833
+ F ++ S+DGFQG E++I+ S+VR +GF+S +R+NVA TRA+ C W
Sbjct: 620 IMKQSEFKGQINSVDGFQGREKEIVFFSSVRAKLERGVGFLSDCRRINVAFTRAKSCFWA 679
Query: 834 LGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARL 874
+G+ TL ++ W + DA+ R F+ + + RL
Sbjct: 680 VGNFSTLQKDQN-WAEAILDARKRGRLFDIRKPFERSNRRL 719
>gi|404449013|ref|ZP_11014005.1| type III restriction enzyme, res subunit [Indibacter alkaliphilus
LW1]
gi|403765737|gb|EJZ26615.1| type III restriction enzyme, res subunit [Indibacter alkaliphilus
LW1]
Length = 642
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 159/299 (53%), Gaps = 31/299 (10%)
Query: 577 ASSSYKLHSVEIKPLNFLV--IDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVES 634
A+SSY +K +F V IDEA Q E+ + IP+Q A V+ GD QLP ++S
Sbjct: 352 AASSY------LKSFSFPVVFIDEAGQGLEAATWIPIQKA--KKVVMAGDHLQLPPTIKS 403
Query: 635 KISDEAGFGRSLFER-LTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKS 693
+ ++G G +LFE+ + S +L QYRMH I F N FY+ +++ N ++
Sbjct: 404 FEASKSGLGITLFEKAILRQPSSAVMLREQYRMHELIMGFSNRHFYQGELMAAPNTQA-- 461
Query: 694 YEKQYLTGTEFGTYSFINIIG-GREDFIYH---SCRNIVEVSAVIKILQKLYKAWVGSKQ 749
Y+ E F++ G G + + S N+ E + L+ K +G +Q
Sbjct: 462 ---HYILEEE-PVLEFVDTSGSGYNEQVEEESLSTYNLEEARFALNYLESFVKR-IGLRQ 516
Query: 750 ----KVSIGVVSPYTAQVVAIRKKI--GFEYENKDGFT--VKVKSIDGFQGGEEDIIIIS 801
+ SIG+++PY AQV + + + +E+ N ++ + + SIDGFQG E D+++IS
Sbjct: 517 LKEREFSIGLIAPYRAQVRRLNELLFDTYEFPNLRSYSEFLTIDSIDGFQGRERDVMLIS 576
Query: 802 TVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
VR N G IGF++ +R+NVALTRA+ + ++G TL SS S + A + + + C+
Sbjct: 577 LVRSNAKGEIGFLADTRRMNVALTRAKRKMIVIGDSATL-SSHSFYTAFLDYVEEKNCY 634
>gi|296482130|tpg|DAA24245.1| TPA: senataxin [Bos taurus]
Length = 823
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 147/281 (52%), Gaps = 23/281 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N VL+GD QLP V S + + G+ +S+ R
Sbjct: 325 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLVLVGDPKQLPPTVISVKAQDYGYDQSMMAR 383
Query: 650 LTSL-------NHSKHL----LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L N L L IQYRMHP I LFP+ Y DG ++ E
Sbjct: 384 FHKLLEESVEHNMIGRLPVLQLTIQYRMHPDICLFPSSYIY-----DGILRTNRGTETSR 438
Query: 699 LTGT-EFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVS 757
+ F Y ++ G E S N+ E+ V++++ KL K +IG+++
Sbjct: 439 CSSDWPFQPYLVFDVGDGLERRDNDSYVNVQEIKLVMELI-KLIKDKRRDVTFRNIGIIT 497
Query: 758 PYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCN-TGGSIGFISK 816
Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR N T GSIGF++
Sbjct: 498 HYKAQKTMIQKDLDKEFDRKGA--AEVDTVDAFQGRQKDCVIVTCVRANATQGSIGFLAS 555
Query: 817 PQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ + W L+ DA+ R
Sbjct: 556 LQRLNVTITRAKYSLFILGHLRTLVENRH-WYHLIQDAQKR 595
Score = 45.1 bits (105), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 19/88 (21%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ +L LL +IK R L C P+N A+ EL +
Sbjct: 111 LIHGPPGTGKSKTIVGILYRLLTENQRRGYSDENSNAKIKQNRVLVCAPSNAAVDELMKK 170
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILLF 353
++ KE K P+ GDI L
Sbjct: 171 IILEFKEKCK---DKKNPMGNCGDINLV 195
>gi|55377267|ref|YP_135117.1| DNA-binding protein-like protein [Haloarcula marismortui ATCC
43049]
gi|55229992|gb|AAV45411.1| DNA binding protein eukaryotic-like [Haloarcula marismortui ATCC
43049]
Length = 741
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 151/305 (49%), Gaps = 34/305 (11%)
Query: 547 SLDELNLPCTTSKLVLEDF--CFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKE 604
+LD +N + + +V + RA + T +S+ L + + +V+DEA Q
Sbjct: 425 TLDRVNASQSANDVVRRAYSDVPGRADVVAVTNNSAATL----AREFDLVVLDEATQSTC 480
Query: 605 SESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS----LNHSKHLL 660
+ S IPL A + AVL GD QLP S E+ +G SLFE L + + L
Sbjct: 481 AASCIPLVRA--DRAVLAGDHRQLPPYSASDEPPESSYGHSLFEHLYADGGVYDGVGLQL 538
Query: 661 NIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFI 720
QYRMH I+ FPN +FY + +G V ++ + G +GGR + +
Sbjct: 539 QTQYRMHRDIAYFPNRRFYDRTLRNGRAVDPLP-DRPAIEGYN---------VGGRVETV 588
Query: 721 YHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKD-G 779
HS N E V +++ L ++ IGV++PY+AQV IR+ + E D G
Sbjct: 589 GHSKSNPTEARLVAHLVEDLLSDVPANE----IGVITPYSAQVSRIRETL---TERTDAG 641
Query: 780 FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISK----PQRVNVALTRARHCLWILG 835
V V +ID FQGGE I++S VR N G++GF+ + P+R+NVALTRA+ ++
Sbjct: 642 DRVTVDTIDSFQGGERTAIVLSLVRSNAEGTVGFLRRPVDGPRRLNVALTRAKQYCAVVA 701
Query: 836 SERTL 840
TL
Sbjct: 702 DWHTL 706
>gi|68076201|ref|XP_680020.1| erythrocyte membrane-associated antigen [Plasmodium berghei strain
ANKA]
gi|56500887|emb|CAI00225.1| erythrocyte membrane-associated antigen, putative [Plasmodium
berghei]
Length = 1480
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 137/262 (52%), Gaps = 12/262 (4%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE AQ E + IPL N VLIGD QLP + S + + G +SL ER
Sbjct: 1122 VIIDECAQSIEPSNLIPLGHYCTN-LVLIGDHKQLPPTIISPDAIKLGLDKSLLERFVMA 1180
Query: 654 NHSK-HLLNIQYRMHPSISLFPNLQFYRNQILDGANV--KSKSYEKQYLTGTEFGTYSFI 710
+ HLL+ Q RMH SI FPN FY N+ L ANV +++ K +L FI
Sbjct: 1181 KIAPIHLLSTQRRMHLSICTFPNFHFYDNK-LKTANVTEENRPIIKGFLWPNPKCRLVFI 1239
Query: 711 NIIGGR-----EDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVA 765
++ G+ E+ S N+ E+ +I +L+ + G IG+++ Y AQ +
Sbjct: 1240 DVSLGKPGSKFENAYGTSKFNLYEIEPLIAVLKSIVNE--GCVSVDEIGILTAYDAQKIK 1297
Query: 766 IRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALT 825
++K + + + +++ SIDGFQG E+D+I+ S VR N +GF+ +R+NV LT
Sbjct: 1298 LKKAVQETFPYEAAHRIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLRDARRLNVMLT 1357
Query: 826 RARHCLWILGSERTLISSESIW 847
RA+ + I G + TL + + W
Sbjct: 1358 RAKRGVIIFGDQFTLANDPANW 1379
>gi|448649355|ref|ZP_21680068.1| DNA-binding protein-like protein [Haloarcula californiae ATCC
33799]
gi|445773999|gb|EMA25028.1| DNA-binding protein-like protein [Haloarcula californiae ATCC
33799]
Length = 741
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 151/305 (49%), Gaps = 34/305 (11%)
Query: 547 SLDELNLPCTTSKLVLEDF--CFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKE 604
+LD +N + + +V + RA + T +S+ L + + +V+DEA Q
Sbjct: 425 TLDRVNASQSANDVVRRAYSDVPGRADVVAVTNNSAATL----AREFDLVVLDEATQSTC 480
Query: 605 SESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS----LNHSKHLL 660
+ S IPL A + AVL GD QLP S E+ +G SLFE L + + L
Sbjct: 481 AASCIPLVRA--DRAVLAGDHRQLPPYSASDEPPESSYGHSLFEHLYADGGVYDGVGLQL 538
Query: 661 NIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFI 720
QYRMH I+ FPN +FY + +G V ++ + G +GGR + +
Sbjct: 539 QTQYRMHRDIAYFPNRRFYDRTLRNGRAVNPLP-DRPAIEGYN---------VGGRVETV 588
Query: 721 YHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKD-G 779
HS N E V +++ L ++ IGV++PY+AQV IR+ + E D G
Sbjct: 589 GHSKSNPTEARLVAHLVEDLLSDVPANE----IGVITPYSAQVSRIRETL---TERTDAG 641
Query: 780 FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISK----PQRVNVALTRARHCLWILG 835
V V +ID FQGGE I++S VR N G++GF+ + P+R+NVALTRA+ ++
Sbjct: 642 DRVTVDTIDSFQGGERTAIVLSLVRSNAEGTVGFLGRPVDGPRRLNVALTRAKQYCAVVA 701
Query: 836 SERTL 840
TL
Sbjct: 702 DWHTL 706
>gi|148676460|gb|EDL08407.1| amyotrophic lateral sclerosis 4 homolog (human) [Mus musculus]
Length = 846
Score = 131 bits (330), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 151/290 (52%), Gaps = 25/290 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 350 PFSCVIVDEAGQSCEVETLSPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 408
Query: 650 LTSL---NHSKHL--------LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L N +++ L IQYRMHP I LFP+ Y N+K+ +
Sbjct: 409 FCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVY------NKNLKTNRLTESI 462
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
+E F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 463 RCSSEWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGII 521
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D II++ VR + GSIGF++
Sbjct: 522 THYKAQKTMIQKDLEKEFDKKG--PAEVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLA 579
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADE 865
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R +
Sbjct: 580 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WYELIQDAQKRGAIIKTSD 628
Score = 46.2 bits (108), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 52/115 (45%), Gaps = 23/115 (20%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 136 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENFNAKIKQNRVLVCAPSNAAVDELMKK 195
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYL----NYRIKK 376
++ KE K P+ GDI L +N + L N+R+KK
Sbjct: 196 IILEFKEKCK---DKKNPLGNCGDINLVRLGPEKSINTEVLKFSLDSQVNHRMKK 247
>gi|211828990|gb|AAH79604.2| Setx protein [Mus musculus]
Length = 837
Score = 131 bits (329), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 151/290 (52%), Gaps = 25/290 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 341 PFSCVIVDEAGQSCEVETLSPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 399
Query: 650 LTSL---NHSKHL--------LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L N +++ L IQYRMHP I LFP+ Y N+K+ +
Sbjct: 400 FCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVY------NKNLKTNRLTESI 453
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
+E F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 454 RCSSEWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGII 512
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D II++ VR + GSIGF++
Sbjct: 513 THYKAQKTMIQKDLEKEFDKKG--PAEVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLA 570
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADE 865
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R +
Sbjct: 571 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WYELIQDAQKRGAIIKTSD 619
Score = 46.2 bits (108), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 55/115 (47%), Gaps = 23/115 (20%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 127 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENFNAKIKQNRVLVCAPSNAAVDELMKK 186
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYL----NYRIKK 376
++ KE K D ++ P+ GDI L +N + L N+R+KK
Sbjct: 187 IILEFKEKCK-DKKN--PLGNCGDINLVRLGPEKSINTEVLKFSLDSQVNHRMKK 238
>gi|194667596|ref|XP_588126.4| PREDICTED: uncharacterized protein LOC539572 [Bos taurus]
Length = 2116
Score = 131 bits (329), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 142/267 (53%), Gaps = 14/267 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVE-SKISDEAGFGRSLFERLTS 652
+V+DE +Q+ E S +P+ +L+GD QLP ++ S + E G ++LF+RL
Sbjct: 1812 VVLDECSQMTEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCL 1871
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ H LL QYR HP+IS N FY +++G + +S ++L T F N+
Sbjct: 1872 MGHKPILLRTQYRCHPTISAIANDLFYEGNLMNGISETERSPLLEWLP-----TLCFYNV 1926
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI-G 771
G + +S N+ E + +K++Q L + + IGV++ Y +Q+ + +
Sbjct: 1927 KGLEQIERGNSFHNVAEAAFTLKLIQSLIASGIAGSM---IGVITLYKSQMYKLCHLLSA 1983
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
++++ + V+V ++D FQG E++III+S VR +GFI +R+NVALTR R L
Sbjct: 1984 MDFDHPNLKAVQVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRGRRHL 2040
Query: 832 WILGSERTLISSESIWGALVCDAKARQ 858
I+G+ + +WG ++ + R+
Sbjct: 2041 LIVGN-LACLRKNRLWGRVIQHCEGRE 2066
>gi|50293759|ref|XP_449291.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528604|emb|CAG62265.1| unnamed protein product [Candida glabrata]
Length = 1125
Score = 131 bits (329), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 146/315 (46%), Gaps = 46/315 (14%)
Query: 571 SLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPA 630
++ FST ++ IK + +++DE+ Q E + IPL L GI V +GD+ QL
Sbjct: 799 TIIFSTNVAAGSTELKVIKEIPVVIMDESTQSSEVSTLIPLSLPGIKTFVFVGDDKQL-- 856
Query: 631 MVESKISDEAGFGRSLFERL--TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
S SD SLFER+ + H+LN QYRMHP+IS FP Y+N++ DG
Sbjct: 857 ---SSFSDIPQLSLSLFERILQNGTYQNPHMLNTQYRMHPTISEFPRTMIYKNELQDGVT 913
Query: 689 VKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVS----AVIKILQKLYKAW 744
+ K +K Y + RE R++ VS A +++ ++
Sbjct: 914 AEQKQLDK---VAHPVYFYDYRATAQNREQLHRVRRRDVTTVSYYNRAECRMILEVVHML 970
Query: 745 VGSKQKV--SIGVVSPYTAQVVAIRKK-------------IGFEYENKDGFTV------- 782
V K IG+++PY Q + I + E KD F+V
Sbjct: 971 VIEKGVPLEDIGIITPYAGQREQLATMVQADELINPRGLVIEKQSEEKDLFSVNEQSMGS 1030
Query: 783 ----------KVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLW 832
+V ++D FQG E+ +I+ S VR N +IGF+ +R+NVALTRA++ L
Sbjct: 1031 NNTICIVNGLQVSTVDAFQGHEKSVIVFSCVRNNESNTIGFLKDQRRLNVALTRAKNSLV 1090
Query: 833 ILGSERTLISSESIW 847
I+G L S+SIW
Sbjct: 1091 IVGCSSVLSRSDSIW 1105
>gi|167378864|ref|XP_001734957.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165903256|gb|EDR28864.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 1040
Score = 131 bits (329), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 149/277 (53%), Gaps = 31/277 (11%)
Query: 595 VIDEAAQLKESESTIPLQLAGI---NHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT 651
++DEAAQ E E+ LAGI AVLIGD QL S + EAGF +S+FER
Sbjct: 687 IVDEAAQSLEPET-----LAGIINVRKAVLIGDIQQLQPTCLSTEAREAGFQKSMFERFM 741
Query: 652 SLNHSKH-LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYS-- 708
+ K +L QYRMHP+I+ F N FY ++ +G + + + ++ + + F Y+
Sbjct: 742 ANTQIKRTMLKTQYRMHPAIAEFSNKMFYSFKLENGVDGEDR-FDDRIINF--FPDYTNP 798
Query: 709 --FINIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVV 764
FIN GRE + S N EV + +I+ L K V + IG++SPY AQ
Sbjct: 799 IMFINC-DGREQYGSSGTSYNNEGEVLIIKQIVDGLLKNKVKENE---IGIISPYQAQQE 854
Query: 765 AIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
I + + + +KV +IDGFQG E++ II S VR N IGF++ +R+NVAL
Sbjct: 855 LISQCVSTK--------IKVANIDGFQGNEKEYIIFSCVRSNQTLGIGFVNDYKRLNVAL 906
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCFF 861
TRA+ L ++G+ +TLI S+ +W LV R F
Sbjct: 907 TRAKCGLIVIGNIQTLIGSK-VWSMLVHHFYLRDALF 942
>gi|378756208|gb|EHY66233.1| hypothetical protein NERG_00929 [Nematocida sp. 1 ERTm2]
Length = 788
Score = 131 bits (329), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 150/296 (50%), Gaps = 34/296 (11%)
Query: 557 TSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGI 616
T L D ASL F T S + +V K + +++DE Q E S IPLQ +
Sbjct: 381 TKSAALIDDAMAGASLVFCTLSMAAST-AVSKKEFHVVIVDEVCQSIEPSSIIPLQ-NSV 438
Query: 617 NHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNL 676
VL+GD QLP + S+ +D SLFERL + +L+ QYRMH IS FPN
Sbjct: 439 RRLVLVGDPKQLPPTIFSESND---LSVSLFERLAE-TITPLILDTQYRMHSDISCFPNK 494
Query: 677 QFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKI 736
FY +++DG V +S L T GG + S N E+ + +
Sbjct: 495 TFYAGKLIDG--VVLESIVPMALVDT-----------GGEQKRNRTSLYNPREIDFIEDL 541
Query: 737 LQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEED 796
L ++ K K SI +++PY Q +IR + + N+ + V ++DGFQG E+D
Sbjct: 542 L-----PYIMDKYK-SIAIITPYKEQ--SIRLSVNRKIINRQ---ITVSTVDGFQGQEKD 590
Query: 797 IIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVC 852
II+STVR N IGF++ +R+NVALTRA++ + ILG R L+ + IW LV
Sbjct: 591 CIIVSTVRTN---GIGFLNDYRRMNVALTRAKYTVIILGCVR-LLEKDKIWKQLVA 642
Score = 63.5 bits (153), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 141/307 (45%), Gaps = 47/307 (15%)
Query: 31 VFSWSLEDIFSQSFFKDQVEK-IPESFQSVKQYFGSFVFPLL--EETRMQLRSGLEAM-R 86
V S L I+ S +V+K + ++S+++YF ++ +PL+ E ++ + M +
Sbjct: 38 VMSMELRAIYENS---TKVKKGVKNLYRSIREYFITY-YPLIINETVASIIKDTKDIMPQ 93
Query: 87 RAPYAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSD 146
+I+F K G N GI ++ G K++ GD F P +
Sbjct: 94 NVVIEPIISFIYEKKEGANAIGITT----KSLVTLGSSKDKSVEGD------FMPGDIVM 143
Query: 147 LRRVGRT------WTFVSVTTVPDDEDENKKENRYKVKARNN--MQVHDK-TKKSFFFIY 197
+ R G+T + + T KK+ +Y + N+ M + K + + +Y
Sbjct: 144 VIRKGQTHDLCKNYILSGIIT-------GKKKFKYTLITSNSSCMALSKKNVEGEYVLVY 196
Query: 198 LTNILPNKRIWNSLHMCGNWKVITQVLG-TDSVVDERCELCSVQRKGQWDEKFGPSFSST 256
++NI+ +KR + +L + + Q++ T V E+ ++ ++ DE +
Sbjct: 197 VSNIISSKREYMALLKFSDSPLAKQLMNPTPPVETEKKKVLQAVKEFHIDEGY-----KK 251
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTN 316
LNE+Q A++ L + + LI GPPGTGKT+T+S ++ ++ + L C P+N
Sbjct: 252 LNEAQRNAVIMSLNQ-------PLTLIQGPPGTGKTQTISCMISQFIQRGMQVLVCAPSN 304
Query: 317 VAITELA 323
+A+ +L
Sbjct: 305 MAVFKLV 311
>gi|297475614|ref|XP_002688121.1| PREDICTED: uncharacterized protein LOC539572 [Bos taurus]
gi|296486778|tpg|DAA28891.1| TPA: prematurely terminated mRNA decay factor-like [Bos taurus]
Length = 2116
Score = 131 bits (329), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 142/267 (53%), Gaps = 14/267 (5%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVE-SKISDEAGFGRSLFERLTS 652
+V+DE +Q+ E S +P+ +L+GD QLP ++ S + E G ++LF+RL
Sbjct: 1812 VVLDECSQMTEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCL 1871
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ H LL QYR HP+IS N FY +++G + +S ++L T F N+
Sbjct: 1872 MGHKPILLRTQYRCHPTISAIANDLFYEGNLMNGISETERSPLLEWLP-----TLCFYNV 1926
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI-G 771
G + +S N+ E + +K++Q L + + IGV++ Y +Q+ + +
Sbjct: 1927 KGLEQIERGNSFHNVAEAAFTLKLIQSLIASGIAGSM---IGVITLYKSQMYKLCHLLSA 1983
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
++++ + V+V ++D FQG E++III+S VR +GFI +R+NVALTR R L
Sbjct: 1984 MDFDHPNLKAVQVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRGRRHL 2040
Query: 832 WILGSERTLISSESIWGALVCDAKARQ 858
I+G+ + +WG ++ + R+
Sbjct: 2041 LIVGN-LACLRKNRLWGRVIQHCEGRE 2066
>gi|387595778|gb|EIJ93401.1| hypothetical protein NEPG_01743 [Nematocida parisii ERTm1]
Length = 1360
Score = 131 bits (329), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 153/289 (52%), Gaps = 46/289 (15%)
Query: 567 FKRASLFFST----ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLI 622
RA+L F T SSS + + +I L+IDEA Q E + IPL+ A + +L+
Sbjct: 1081 LSRANLVFCTLSMAGSSSLREYFFDI-----LIIDEACQATEPSTLIPLR-ALPSKLILV 1134
Query: 623 GDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQ 682
GD QLP + IS E +LFERL+S + LL+ QYRM+ IS F + QFY ++
Sbjct: 1135 GDPMQLPPTI---ISQEKELTLTLFERLSS-SIPPLLLDTQYRMNSMISKFASQQFYNDK 1190
Query: 683 ILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYK 742
+ +G V S ++FI+ G + ++I + ILQ Y
Sbjct: 1191 LKNGVIVNS------------LLPFAFIDAEGVEKT----DDKDIYNKKEITTILQ-FYG 1233
Query: 743 AWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIIST 802
A V K ++G++SPY QV ++K I +D + + ++DGFQG E+D IIIST
Sbjct: 1234 AAV--KAYGTVGIISPYKGQVSRLKKYI------RD---IDIATVDGFQGQEKDCIIIST 1282
Query: 803 VRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
VR IGF+S +R+NVALTRAR+ L I+GS R L+ + W L+
Sbjct: 1283 VRSK---RIGFLSDIRRMNVALTRARYTLIIVGSMR-LLQQDPTWQPLI 1327
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 252 SFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLA 311
+F S LN+SQ A+ L ++ + LI GPPGTGKTKT+S ++ L K R L
Sbjct: 919 AFYSQLNKSQQAAVYNALL-----PKNSISLIQGPPGTGKTKTISGMIACFLLQKRRVLV 973
Query: 312 CTPTNVAITEL 322
C P+N A+ L
Sbjct: 974 CAPSNAAVDML 984
>gi|299472182|emb|CBN79685.1| Presumed helicase required for RNA polymerase II transcription
termination and processing of RNAs [Ectocarpus
siliculosus]
Length = 1201
Score = 131 bits (329), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 155/323 (47%), Gaps = 52/323 (16%)
Query: 585 SVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGR 644
S+ K + +++DEA Q E + IPL L G +L+GD QLPA V S+ +
Sbjct: 404 SLSGKGFDTVIVDEACQATEPSTLIPLSL-GCKRLILVGDPRQLPATVISQRAARLNLEV 462
Query: 645 SLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVK--------SKSYEK 696
SLFERL + H+L +QYRMHP I FP+ +FY ++ D V+ S S E
Sbjct: 463 SLFERLERAGYPVHMLTVQYRMHPEIRAFPSARFYNGRLTDAPCVRDQAAIPAQSPSSET 522
Query: 697 QYLT--GTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGS------- 747
L G F + +++ G E S +N E S V L +L + + S
Sbjct: 523 TALPPLGPCFPPFLLVDVSSGSERRAGSSYQNPREASFVSAFLARLVASGLRSGRGVKAG 582
Query: 748 --------------KQK---VSIGVVSPYTAQVVAIRKKIGFEYE-----------NKDG 779
++K V +GV++PY QV I++++ G
Sbjct: 583 GGGGDGTAAGGGQDREKSGVVRVGVITPYRGQVHCIQQELSGGGGGGGGRRLKGGVEDGG 642
Query: 780 FTVKVKSIDGFQGGEEDIIIISTVRCNTG-----GSIGFISKPQRVNVALTRARHCLWIL 834
+V ++DGFQG E D+++ S VR + G IGF++ +R+NVALTRAR L +L
Sbjct: 643 VDAEVSTVDGFQGKEVDVVLFSCVRAPSSGGGGGGGIGFLADQRRMNVALTRARRSLVVL 702
Query: 835 GSERTLISSESIWGALVCDAKAR 857
G+ L SS+ W ALV +K+R
Sbjct: 703 GNVGRL-SSDGTWKALVDHSKSR 724
>gi|294657940|ref|XP_460248.2| DEHA2E21780p [Debaryomyces hansenii CBS767]
gi|199433066|emb|CAG88524.2| DEHA2E21780p [Debaryomyces hansenii CBS767]
Length = 1141
Score = 131 bits (329), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 130/490 (26%), Positives = 209/490 (42%), Gaps = 79/490 (16%)
Query: 440 KPFLKYVRERF----KCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLL 495
K +LK+ ++ F K A+ S+ N P S + ++ ++ L L++F L+
Sbjct: 664 KNYLKFTKDTFNDSQKVAIQSVLNNSITVLQGPPGSGKTSTIYEIILQLLDNLNTFPILV 723
Query: 496 FQ------DNVVSKELEKLFSHSVDEGIS----WAFVRKRYLLQ--LHQRRSECLSV-LR 542
DN+ K LEK S+ +S + R+ L LH + + L + ++
Sbjct: 724 VAASNIAIDNIAEKLLEK-HGRSILRIVSNEKEREYNREHPLASICLHHKVYDALPMAMK 782
Query: 543 NLWNSLDELNLP---------CTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNF 593
+ + N P T ++ L D +A + F+T + +K L
Sbjct: 783 QTIDDMRRFNGPKVSQNQYKKLLTKQIELSDIFIAQAKVIFTTTVVAGGNQLKSVKKLPV 842
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER--LT 651
+++DEA Q E + IPL + G+ V +GD+ QL S S SLFER L
Sbjct: 843 VIMDEATQSSEPTTLIPLSVPGVQKFVFVGDQKQL-----SSFSQVPNLSLSLFERVLLN 897
Query: 652 SLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
+ H+L+ QYRMHP IS FP +FY + + DG + E + L G F +
Sbjct: 898 GTYRTPHMLDTQYRMHPMISEFPRNRFYGSLLKDGI-----TAEDRILEGIPSNPVYFWD 952
Query: 712 IIGG----------REDFIYHSCRNIVEVSAVIK-ILQKLYKAWVGSKQKVSIGVVSPYT 760
G RED Y + N E+S + K +L +Y + K IG+++PY
Sbjct: 953 TCGTAQEERVRINFREDRGY-TYSNRSEISYITKVVLNLIYDKGIP---KSEIGIITPYR 1008
Query: 761 AQVVAI-------------RKKIGFEYENKDGFT------------VKVKSIDGFQGGEE 795
Q I + I E + D + + + SID FQG E+
Sbjct: 1009 GQRDLISSILVKNDLINPEKNDILVEVDRDDIYNESKPVTIHTVSEIMIASIDAFQGREK 1068
Query: 796 DIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAK 855
+ +I+S VR N +IGF+ +R+NVALTRA++ L I+G + L +W + +
Sbjct: 1069 NFLIMSCVRSNKESNIGFLGDERRLNVALTRAKYGLIIIGDVQCLREGNPLWREYLEHLQ 1128
Query: 856 ARQCFFNADE 865
DE
Sbjct: 1129 GHDSIHKDDE 1138
>gi|253741410|gb|EES98280.1| Regulator of nonsense transcripts 1-like protein [Giardia
intestinalis ATCC 50581]
Length = 1309
Score = 131 bits (329), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 149/303 (49%), Gaps = 30/303 (9%)
Query: 562 LEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVL 621
+E+ A + T S+SY H + + L++DE+ Q E ++ + G +H VL
Sbjct: 993 IENLIISSAQVVICTCSTSYDNHLSRVH-FSSLIVDESTQAIEPDTICAIG-HGCSHIVL 1050
Query: 622 IGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRN 681
+GD QL +V + I+ + SL+ERL H L +QYRMHP++S FP+ FY
Sbjct: 1051 MGDHKQLGPIVATNIARLSKLDLSLYERLQQAGIEPHSLTVQYRMHPALSAFPSNTFYNG 1110
Query: 682 QILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYH-----------SCRNIVEV 730
+ +G + L T SF + F +H S RN E+
Sbjct: 1111 MLQNGVTQMDRQ-----LIPKAMSTESFPWPVPSIPSFFWHVQGTHEVGHGTSLRNDTEI 1165
Query: 731 SAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKD-GFT-VKVKSID 788
V I+ L K + ++ IG+V+PY Q K E + KD G++ V V S+D
Sbjct: 1166 LCVEAIVDHLLKCY--ELKQGDIGIVTPYDYQ------KCQIEMQLKDAGYSEVFVNSVD 1217
Query: 789 GFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWG 848
FQG E+++II STVR + IGF+ +R+NV LTR R L I+G+ T ++ + W
Sbjct: 1218 AFQGHEKEVIIFSTVR-SVDKHIGFLKDQRRLNVGLTRCRCALIIVGNA-TALAIDDTWR 1275
Query: 849 ALV 851
AL+
Sbjct: 1276 ALI 1278
>gi|211828438|gb|AAH58109.2| Setx protein [Mus musculus]
Length = 825
Score = 131 bits (329), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 151/290 (52%), Gaps = 25/290 (8%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 329 PFSCVIVDEAGQSCEVETLSPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 387
Query: 650 LTSL---NHSKHL--------LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L N +++ L IQYRMHP I LFP+ Y N+K+ +
Sbjct: 388 FCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVY------NKNLKTNRLTESI 441
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
+E F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 442 RCSSEWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGII 500
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D II++ VR + GSIGF++
Sbjct: 501 THYKAQKTMIQKDLEKEFDKKG--PAEVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLA 558
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADE 865
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R +
Sbjct: 559 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WYELIQDAQKRGAIIKTSD 607
Score = 45.8 bits (107), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 55/115 (47%), Gaps = 23/115 (20%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIK-CRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 115 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENFNAKIKQNRVLVCAPSNAAVDELMKK 174
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYL----NYRIKK 376
++ KE K D ++ P+ GDI L +N + L N+R+KK
Sbjct: 175 IILEFKEKCK-DKKN--PLGNCGDINLVRLGPEKSINTEVLKFSLDSQVNHRMKK 226
>gi|387594020|gb|EIJ89044.1| hypothetical protein NEQG_00863 [Nematocida parisii ERTm3]
Length = 1229
Score = 131 bits (329), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 153/289 (52%), Gaps = 46/289 (15%)
Query: 567 FKRASLFFST----ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLI 622
RA+L F T SSS + + +I L+IDEA Q E + IPL+ A + +L+
Sbjct: 950 LSRANLVFCTLSMAGSSSLREYFFDI-----LIIDEACQATEPSTLIPLR-ALPSKLILV 1003
Query: 623 GDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQ 682
GD QLP + IS E +LFERL+S + LL+ QYRM+ IS F + QFY ++
Sbjct: 1004 GDPMQLPPTI---ISQEKELTLTLFERLSS-SIPPLLLDTQYRMNSMISKFASQQFYNDK 1059
Query: 683 ILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYK 742
+ +G V S ++FI+ G + ++I + ILQ Y
Sbjct: 1060 LKNGVIVNS------------LLPFAFIDAEGVEKT----DDKDIYNKKEITTILQ-FYG 1102
Query: 743 AWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIIST 802
A V K ++G++SPY QV ++K I +D + + ++DGFQG E+D IIIST
Sbjct: 1103 AAV--KAYGTVGIISPYKGQVSRLKKYI------RD---IDIATVDGFQGQEKDCIIIST 1151
Query: 803 VRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
VR IGF+S +R+NVALTRAR+ L I+GS R L+ + W L+
Sbjct: 1152 VRSK---RIGFLSDIRRMNVALTRARYTLIIVGSMR-LLQQDPTWQPLI 1196
Score = 56.2 bits (134), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 252 SFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLA 311
+F S LN+SQ A+ L ++ + LI GPPGTGKTKT+S ++ L K R L
Sbjct: 788 AFYSQLNKSQQAAVYNALL-----PKNSISLIQGPPGTGKTKTISGMIACFLLQKRRVLV 842
Query: 312 CTPTNVAITEL 322
C P+N A+ L
Sbjct: 843 CAPSNAAVDML 853
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.135 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,627,967,462
Number of Sequences: 23463169
Number of extensions: 1160035848
Number of successful extensions: 3017368
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2637
Number of HSP's successfully gapped in prelim test: 3178
Number of HSP's that attempted gapping in prelim test: 2993951
Number of HSP's gapped (non-prelim): 15581
length of query: 1825
length of database: 8,064,228,071
effective HSP length: 158
effective length of query: 1667
effective length of database: 8,652,014,665
effective search space: 14422908446555
effective search space used: 14422908446555
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 85 (37.4 bits)