Query 000230
Match_columns 1822
No_of_seqs 761 out of 4687
Neff 6.2
Searched_HMMs 29240
Date Tue Mar 26 16:44:50 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000230.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_9-13//hhsearch_pdb/000230hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nf1_A KLC 1, kinesin light ch 1.0 1 1 187.1 29.1 275 862-1142 24-310 (311)
2 3ulq_A Response regulator aspa 1.0 1 1 182.6 31.8 263 867-1148 105-377 (383)
3 3edt_B KLC 2, kinesin light ch 1.0 1 1 180.1 28.8 261 874-1140 10-282 (283)
4 3n71_A Histone lysine methyltr 1.0 1 1 179.1 21.0 150 912-1061 314-463 (490)
5 3q15_A PSP28, response regulat 1.0 1 1 179.0 25.1 263 865-1147 101-373 (378)
6 4a1s_A PINS, partner of inscut 1.0 1 1 176.4 26.7 235 862-1142 123-375 (411)
7 3n71_A Histone lysine methyltr 1.0 1 1 175.1 22.2 157 865-1021 309-465 (490)
8 4gyw_A UDP-N-acetylglucosamine 1.0 1 1 173.3 21.4 175 861-1067 5-179 (723)
9 3sf4_A G-protein-signaling mod 1.0 1 1 171.6 28.0 233 865-1143 87-340 (406)
10 4a1s_A PINS, partner of inscut 1.0 1 1 170.6 28.9 298 864-1178 47-369 (411)
No 1
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=1.00 E-value=1 Score=187.09 Aligned_cols=275 Identities=24% Similarity=0.247 Sum_probs=227.0
Q ss_pred CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 82499999999999992995899998874321112215999611799999999999982998999999999999999950
Q 000230 862 SADGRTLLESSKTSLDKGKLEDAVNYGSKALSKLMSVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINEREL 941 (1822)
Q Consensus 862 s~~A~~L~~lG~~~~~qG~yeeAiell~eAL~l~e~i~G~dhp~~a~al~nLA~ly~~lGd~eeAle~~qkAL~i~er~l 941 (1822)
...+..+..+|.+++..|++++|+.++++++.+.....+.+++..+.++..+|.+|..+|++++|+.++++++.+.++..
T Consensus 24 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 103 (311)
T 3nf1_A 24 PARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTL 103 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 68999999999999985899999999999999999870899889999999999999978899999999999999999980
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 99992349999999999999199799999999999999983499996699999999999999799799999999999999
Q 000230 942 GLDHPDTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHEALKCN 1021 (1822)
Q Consensus 942 G~dhp~ta~al~nLA~iy~~lG~~eeAl~ll~kAL~l~e~i~G~dhp~~a~al~nLA~il~~lG~yeeAl~~lekAL~i~ 1021 (1822)
+.+++....++.++|.+|..+|++++|+.++++++.+.....+.+++....++.++|.++..+|++++|+.++++++.+.
T Consensus 104 ~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~ 183 (311)
T 3nf1_A 104 GKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIY 183 (311)
T ss_dssp CTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 88975999999999999998186999999999999999986589981899999999999998489799999999999999
Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC--
Q ss_conf 99618895889999999999999905989999999999999999-719898999999999999999999999999849--
Q 000230 1022 QRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLQILQA-KLGSEDLRTQDAAAWLEYFESKALEQQEAARNG-- 1098 (1822)
Q Consensus 1022 ~~~~G~dhp~tA~~l~nLA~iy~~lGd~eeAi~~lkkAL~I~k~-~LG~dhp~t~~a~~~L~~l~qqAl~~qeA~~~g-- 1098 (1822)
....+.+++....++..+|.+|..+|++++|+.++++++.+... .++..++........+..+.........+....
T Consensus 184 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 263 (311)
T 3nf1_A 184 QTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEY 263 (311)
T ss_dssp HHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCC
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 98818897889999999999999848989999999999999998557889932189999999999732755568888888
Q ss_pred --------CCCCCHHHHCCCCCCHHHHH-HHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf --------99983011101634088899-999199989999999999999972
Q 000230 1099 --------TPKPDASISSKGHLSVSDLL-DYIAPDTDSKARDAQRKARAKLKG 1142 (1822)
Q Consensus 1099 --------~~~p~~~~a~~~~lsi~~Ll-~yi~~Gd~ekAle~~kKAL~i~k~ 1142 (1822)
..++... ..+..++ .|...|++++|+.++++|+++.++
T Consensus 264 ~~~~~~~~~~~~~~~------~~~~~la~~~~~~g~~~~A~~~~~~al~l~~~ 310 (311)
T 3nf1_A 264 GGWYKACKVDSPTVT------TTLKNLGALYRRQGKFEAAETLEEAAMRSRKQ 310 (311)
T ss_dssp C---------CHHHH------HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHCCCCCCHHH------HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
T ss_conf 887750377980399------99999999999877999999999999998646
No 2
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=1.00 E-value=1 Score=182.58 Aligned_cols=263 Identities=14% Similarity=0.053 Sum_probs=210.2
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCH
Q ss_conf 99999999999299589999887432111221599961179999999999998299899999999999999995099992
Q 000230 867 TLLESSKTSLDKGKLEDAVNYGSKALSKLMSVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHP 946 (1822)
Q Consensus 867 ~L~~lG~~~~~qG~yeeAiell~eAL~l~e~i~G~dhp~~a~al~nLA~ly~~lGd~eeAle~~qkAL~i~er~lG~dhp 946 (1822)
.++..|..++..|++++|+.++++|+.+.... ++.+..+.++.++|.+|..+|++++|+.++++|+.+++.. +...+
T Consensus 105 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~ 181 (383)
T 3ulq_A 105 FNFFRGMYELDQREYLSAIKFFKKAESKLIFV--KDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEH-EAYNI 181 (383)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGC--CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTC-STTHH
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC-CCCHH
T ss_conf 99999999998669999999999999998609--9899999999999999998088799999999999999867-66437
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 34999999999999919979999999999999998349999669999999999999979979999999999999999618
Q 000230 947 DTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHEALKCNQRLLG 1026 (1822)
Q Consensus 947 ~ta~al~nLA~iy~~lG~~eeAl~ll~kAL~l~e~i~G~dhp~~a~al~nLA~il~~lG~yeeAl~~lekAL~i~~~~~G 1026 (1822)
..+.++.++|.+|..+|++++|+.++++|+.+..... +.+..+.++.++|.+|..+|++++|+.++++|+.+.....
T Consensus 182 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~- 258 (383)
T 3ulq_A 182 RLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEK--QPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESN- 258 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC-
T ss_conf 7998999999999985489999999999999998749--8278999999999999877999999999999999898616-
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH---------HHHHHHHHHHC
Q ss_conf 895889999999999999905989999999999999999719898999999999999999---------99999999984
Q 000230 1027 ADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLQILQAKLGSEDLRTQDAAAWLEYFES---------KALEQQEAARN 1097 (1822)
Q Consensus 1027 ~dhp~tA~~l~nLA~iy~~lGd~eeAi~~lkkAL~I~k~~LG~dhp~t~~a~~~L~~l~q---------qAl~~qeA~~~ 1097 (1822)
+.+..+.++.++|.+|..+|++++|+.++++++.+....- ++........|+.++. +++...+..
T Consensus 259 -~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~-- 332 (383)
T 3ulq_A 259 -ILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAG---DVIYLSEFEFLKSLYLSGPDEEAIQGFFDFLESK-- 332 (383)
T ss_dssp -CGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHT--
T ss_pred -CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC--
T ss_conf -5513999999999999887997999999999999998859---9999999999999883887499999999999977--
Q ss_pred CCCCCCHHHHCCCCCCHHHHH-HHHCCCCHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 999983011101634088899-999199989999999999999972689998
Q 000230 1098 GTPKPDASISSKGHLSVSDLL-DYIAPDTDSKARDAQRKARAKLKGKPGQTC 1148 (1822)
Q Consensus 1098 g~~~p~~~~a~~~~lsi~~Ll-~yi~~Gd~ekAle~~kKAL~i~k~~lG~dH 1148 (1822)
...+.... .+..++ .|...|++++|..++++|+.+.+++...++
T Consensus 333 -~~~~~~~~------~~~~la~~y~~~g~~~~A~~~~~~al~~~~~i~~~e~ 377 (383)
T 3ulq_A 333 -MLYADLED------FAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVS 377 (383)
T ss_dssp -TCHHHHHH------HHHHHHHHHHHTTCHHHHHHHHHHHHHHHTSCSSCCC
T ss_pred -CCHHHHHH------HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf -68779999------9999999999788999999999999999987114530
No 3
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=1.00 E-value=1 Score=180.14 Aligned_cols=261 Identities=22% Similarity=0.210 Sum_probs=214.4
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 99992995899998874321112215999611799999999999982998999999999999999950999923499999
Q 000230 874 TSLDKGKLEDAVNYGSKALSKLMSVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYG 953 (1822)
Q Consensus 874 ~~~~qG~yeeAiell~eAL~l~e~i~G~dhp~~a~al~nLA~ly~~lGd~eeAle~~qkAL~i~er~lG~dhp~ta~al~ 953 (1822)
.....|++++|+.+|++|+.++.+..+.+++..+.++..+|.+|..+|++++|+.++++++.+.++..|.+++....++.
T Consensus 10 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 89 (283)
T 3edt_B 10 HSSGLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLN 89 (283)
T ss_dssp ---CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf 24788977899999999999999863999878999999999999986669999999999999999873876669999998
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 99999999199799999999999999983499996699999999999999799799999999999999996188958899
Q 000230 954 DLAVFYYRLQHTELALKYVNRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHEALKCNQRLLGADHIQTA 1033 (1822)
Q Consensus 954 nLA~iy~~lG~~eeAl~ll~kAL~l~e~i~G~dhp~~a~al~nLA~il~~lG~yeeAl~~lekAL~i~~~~~G~dhp~tA 1033 (1822)
++|.+|..+|++++|+.++++++.+.+...+++++....++.++|.+|..+|++++|+.++++++.+.....+.+++..+
T Consensus 90 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 169 (283)
T 3edt_B 90 NLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVA 169 (283)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHH
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 89999998104999999999999999987199986999999999999998577999999999999999986499987999
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHH------HHHHHHHHH----CCCCCC
Q ss_conf 999999999999059899999999999999997-198989999999999999999------999999998----499998
Q 000230 1034 ASYHAIAIALSLMEAYSLSVQHEQTTLQILQAK-LGSEDLRTQDAAAWLEYFESK------ALEQQEAAR----NGTPKP 1102 (1822)
Q Consensus 1034 ~~l~nLA~iy~~lGd~eeAi~~lkkAL~I~k~~-LG~dhp~t~~a~~~L~~l~qq------Al~~qeA~~----~g~~~p 1102 (1822)
.++.++|.+|..+|++++|+.++++++.+.... ++..++........+..+... +....++.. .+..++
T Consensus 170 ~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (283)
T 3edt_B 170 KTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSP 249 (283)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------CCCCCCH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCH
T ss_conf 99999999999849978899999999999887538885436888999999998649963689889989999985687878
Q ss_pred CHHHHCCCCCCHHHHH-HHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 3011101634088899-9991999899999999999999
Q 000230 1103 DASISSKGHLSVSDLL-DYIAPDTDSKARDAQRKARAKL 1140 (1822)
Q Consensus 1103 ~~~~a~~~~lsi~~Ll-~yi~~Gd~ekAle~~kKAL~i~ 1140 (1822)
.... ++..++ .|...|++++|+.++++++++.
T Consensus 250 ~~~~------~~~~la~~~~~~g~~~~A~~~~~~al~~~ 282 (283)
T 3edt_B 250 TVNT------TLRSLGALYRRQGKLEAAHTLEDCASRNR 282 (283)
T ss_dssp HHHH------HHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHH------HHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 9999------99999999998688999999999998740
No 4
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=1.00 E-value=1 Score=179.14 Aligned_cols=150 Identities=10% Similarity=-0.011 Sum_probs=105.4
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 99999998299899999999999999995099992349999999999999199799999999999999983499996699
Q 000230 912 LLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSHPNTA 991 (1822)
Q Consensus 912 nLA~ly~~lGd~eeAle~~qkAL~i~er~lG~dhp~ta~al~nLA~iy~~lG~~eeAl~ll~kAL~l~e~i~G~dhp~~a 991 (1822)
..+..+..+|+|++|+.++++++.+.++++|.+||+++.++++||.+|..+|+|++|+.+++++|.+++..+|++||+++
T Consensus 314 e~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a 393 (490)
T 3n71_A 314 EKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLG 393 (490)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 99999886789999999999999999875499788999999999999998347999999999999999987599878999
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 9999999999997997999999999999999961889588999999999999990598999999999999
Q 000230 992 ATYINVAMMEEGLGNVHVALRYLHEALKCNQRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLQ 1061 (1822)
Q Consensus 992 ~al~nLA~il~~lG~yeeAl~~lekAL~i~~~~~G~dhp~tA~~l~nLA~iy~~lGd~eeAi~~lkkAL~ 1061 (1822)
.+++|||.+|..+|+|++|+.+|++|+++.+..+|++||.++.++.+|+.++..++.+++|...|+++.+
T Consensus 394 ~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~ 463 (490)
T 3n71_A 394 MAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMRE 463 (490)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999987899999999999999999980979868999999999999999988889999999999
No 5
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=1.00 E-value=1 Score=178.97 Aligned_cols=263 Identities=16% Similarity=0.054 Sum_probs=204.9
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999999992995899998874321112215999611799999999999982998999999999999999950999
Q 000230 865 GRTLLESSKTSLDKGKLEDAVNYGSKALSKLMSVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLD 944 (1822)
Q Consensus 865 A~~L~~lG~~~~~qG~yeeAiell~eAL~l~e~i~G~dhp~~a~al~nLA~ly~~lGd~eeAle~~qkAL~i~er~lG~d 944 (1822)
...++..|..++..|++++|+.+|++|+.+.... .+.+..+.++.++|.+|..+|++++|+.++++|+.++.+.. ..
T Consensus 101 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~-~~ 177 (378)
T 3q15_A 101 YYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFV--SDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHP-LY 177 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGC--CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTST-TC
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC-CC
T ss_conf 9999999999999778999999999999998658--89189999999999999981990999999999999998678-83
Q ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 92349999999999999199799999999999999983499996699999999999999799799999999999999996
Q 000230 945 HPDTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHEALKCNQRL 1024 (1822)
Q Consensus 945 hp~ta~al~nLA~iy~~lG~~eeAl~ll~kAL~l~e~i~G~dhp~~a~al~nLA~il~~lG~yeeAl~~lekAL~i~~~~ 1024 (1822)
.+..+.++.+||.+|..+|++++|+.++++|+.+.+... +....+.++.++|.+|..+|++++|+.++++|+.+.+..
T Consensus 178 ~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~ 255 (378)
T 3q15_A 178 SIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQ--NDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREK 255 (378)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 066999999999999985789999999999999999869--877899999989999987899999999999999988760
Q ss_pred HCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH---------HHHHHHHHHH
Q ss_conf 1889588999999999999990598999999999999999971989899999999999999---------9999999999
Q 000230 1025 LGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLQILQAKLGSEDLRTQDAAAWLEYFE---------SKALEQQEAA 1095 (1822)
Q Consensus 1025 ~G~dhp~tA~~l~nLA~iy~~lGd~eeAi~~lkkAL~I~k~~LG~dhp~t~~a~~~L~~l~---------qqAl~~qeA~ 1095 (1822)
.++..+.++.++|.+|..+|++++|+.++++++.+....-.+... .....|..+. .+++...+.
T Consensus 256 ---~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~---~~~~~l~~ly~~~~~~~~~~~al~~~~~- 328 (378)
T 3q15_A 256 ---VPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYK---ELFLFLQAVYKETVDERKIHDLLSYFEK- 328 (378)
T ss_dssp ---CGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTCCSCHH---HHHHHHHHHHSSSCCHHHHHHHHHHHHH-
T ss_pred ---CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHH---HHHHHHHHHHHCCCCHHHHHHHHHHHHH-
T ss_conf ---885699999999999998899899999999999999883898899---9999999987088839999999999986-
Q ss_pred HCCCCCCCHHHHCCCCCCHHHHH-HHHCCCCHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 84999983011101634088899-99919998999999999999997268999
Q 000230 1096 RNGTPKPDASISSKGHLSVSDLL-DYIAPDTDSKARDAQRKARAKLKGKPGQT 1147 (1822)
Q Consensus 1096 ~~g~~~p~~~~a~~~~lsi~~Ll-~yi~~Gd~ekAle~~kKAL~i~k~~lG~d 1147 (1822)
....+.... ....++ .|...|++++|..++++++++.+++...+
T Consensus 329 --~~~~~~~~~------~~~~la~~y~~~g~~~~A~~~~~~al~~~~~~~~~~ 373 (378)
T 3q15_A 329 --KNLHAYIEA------CARSAAAVFESSCHFEQAAAFYRKVLKAQEDILKGE 373 (378)
T ss_dssp --TTCHHHHHH------HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred --CCCHHHHHH------HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf --788368999------999999999987999999999999999999985532
No 6
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=176.40 Aligned_cols=235 Identities=15% Similarity=0.105 Sum_probs=163.1
Q ss_pred CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC-----------------HH
Q ss_conf 8249999999999999299589999887432111221599961179999999999998299-----------------89
Q 000230 862 SADGRTLLESSKTSLDKGKLEDAVNYGSKALSKLMSVCGPYHRMTAGAYSLLAVVLYHTGD-----------------FN 924 (1822)
Q Consensus 862 s~~A~~L~~lG~~~~~qG~yeeAiell~eAL~l~e~i~G~dhp~~a~al~nLA~ly~~lGd-----------------~e 924 (1822)
...+..+..+|.++...|++++|+.++++++.+.... .+++..+.++.++|.+|..+|+ ++
T Consensus 123 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~ 200 (411)
T 4a1s_A 123 LGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQL--GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALT 200 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH--HCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 6799999999999998789999999999999999871--04488999999999999983761113331001121069999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 99999999999999950999923499999999999991997999999999999999834999966999999999999997
Q 000230 925 QATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSHPNTAATYINVAMMEEGL 1004 (1822)
Q Consensus 925 eAle~~qkAL~i~er~lG~dhp~ta~al~nLA~iy~~lG~~eeAl~ll~kAL~l~e~i~G~dhp~~a~al~nLA~il~~l 1004 (1822)
+|+.++++++.+.+.. .+++..+.++.++|.+|..+|++++|+.++++++.+..... +....+.++.++|.+|..+
T Consensus 201 ~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~la~~~~~~ 276 (411)
T 4a1s_A 201 RAVEFYQENLKLMRDL--GDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFG--DRAAERRANSNLGNSHIFL 276 (411)
T ss_dssp HHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHHHC
T ss_conf 9999999999999973--88799999999999999985882999999999999998519--9678999999999999987
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 99799999999999999996188958899999999999999059899999999999999997198989999999999999
Q 000230 1005 GNVHVALRYLHEALKCNQRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLQILQAKLGSEDLRTQDAAAWLEYF 1084 (1822)
Q Consensus 1005 G~yeeAl~~lekAL~i~~~~~G~dhp~tA~~l~nLA~iy~~lGd~eeAi~~lkkAL~I~k~~LG~dhp~t~~a~~~L~~l 1084 (1822)
|++++|+.++++++.+.... .++...+.++..+|.+|..+|++++|+.++++++.+....- +......+.
T Consensus 277 g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~------ 346 (411)
T 4a1s_A 277 GQFEDAAEHYKRTLALAVEL--GEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELG--DRIGEARAC------ 346 (411)
T ss_dssp TCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--CHHHHHHHH------
T ss_pred CCHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC--CHHHHHHHH------
T ss_conf 68999999999999999876--98799999999999999981889999999999999999879--858899999------
Q ss_pred HHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHH-HHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999984999983011101634088899-999199989999999999999972
Q 000230 1085 ESKALEQQEAARNGTPKPDASISSKGHLSVSDLL-DYIAPDTDSKARDAQRKARAKLKG 1142 (1822)
Q Consensus 1085 ~qqAl~~qeA~~~g~~~p~~~~a~~~~lsi~~Ll-~yi~~Gd~ekAle~~kKAL~i~k~ 1142 (1822)
..+. .|...|++++|..++++|+.++++
T Consensus 347 ------------------------------~~la~~~~~~g~~~~A~~~~~~al~~~~~ 375 (411)
T 4a1s_A 347 ------------------------------WSLGNAHSAIGGHERALKYAEQHLQLAXX 375 (411)
T ss_dssp ------------------------------HHHHHHHHHTTCHHHHHHHHHHHHHHCCH
T ss_pred ------------------------------HHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf ------------------------------99999999805699999999999999851
No 7
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=1.00 E-value=1 Score=175.12 Aligned_cols=157 Identities=17% Similarity=0.156 Sum_probs=133.4
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999999992995899998874321112215999611799999999999982998999999999999999950999
Q 000230 865 GRTLLESSKTSLDKGKLEDAVNYGSKALSKLMSVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLD 944 (1822)
Q Consensus 865 A~~L~~lG~~~~~qG~yeeAiell~eAL~l~e~i~G~dhp~~a~al~nLA~ly~~lGd~eeAle~~qkAL~i~er~lG~d 944 (1822)
+..+++.+..+..+|+|++|+.+++++|++.+.++|++||.++.++++||.+|..+|+|++|+.++++++.++++++|.+
T Consensus 309 a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~ 388 (490)
T 3n71_A 309 SKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHN 388 (490)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999998867899999999999999998754997889999999999999983479999999999999999875998
Q ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 92349999999999999199799999999999999983499996699999999999999799799999999999999
Q 000230 945 HPDTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHEALKCN 1021 (1822)
Q Consensus 945 hp~ta~al~nLA~iy~~lG~~eeAl~ll~kAL~l~e~i~G~dhp~~a~al~nLA~il~~lG~yeeAl~~lekAL~i~ 1021 (1822)
||+++.+++|||.+|..+|+|++|+.+|++|+.+.+..+|++||.++.++.+++.++..++.|.+|+..|.++.+..
T Consensus 389 Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 389 NAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 78999999999999998789999999999999999998097986899999999999999998888999999999998
No 8
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=1.00 E-value=1 Score=173.31 Aligned_cols=175 Identities=23% Similarity=0.303 Sum_probs=159.4
Q ss_pred CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 98249999999999999299589999887432111221599961179999999999998299899999999999999995
Q 000230 861 SSADGRTLLESSKTSLDKGKLEDAVNYGSKALSKLMSVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERE 940 (1822)
Q Consensus 861 ~s~~A~~L~~lG~~~~~qG~yeeAiell~eAL~l~e~i~G~dhp~~a~al~nLA~ly~~lGd~eeAle~~qkAL~i~er~ 940 (1822)
.+..+.++.++|.++..+|++++|+.+|++|+++ +|+.+.++.+||.+|..+|++++|+.+|++|+.+
T Consensus 5 ~P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l--------~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l---- 72 (723)
T 4gyw_A 5 CPTHADSLNNLANIKREQGNIEEAVRLYRKALEV--------FPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRI---- 72 (723)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH----
T ss_conf 9871999999999999869999999999999986--------8998999999999999869999999999999980----
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 09999234999999999999919979999999999999998349999669999999999999979979999999999999
Q 000230 941 LGLDHPDTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHEALKC 1020 (1822)
Q Consensus 941 lG~dhp~ta~al~nLA~iy~~lG~~eeAl~ll~kAL~l~e~i~G~dhp~~a~al~nLA~il~~lG~yeeAl~~lekAL~i 1020 (1822)
.|+...+|.+||.+|..+|++++|+.+|++|+++ +|..+.+++++|.+|..+|++++|+.+|++|+++
T Consensus 73 ----~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l--------~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l 140 (723)
T 4gyw_A 73 ----SPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQI--------NPAFADAHSNLASIHKDSGNIPEAIASYRTALKL 140 (723)
T ss_dssp ----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ----CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf ----9998999999999999849999999999999980--------9998999999999999869999999999999973
Q ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99961889588999999999999990598999999999999999971
Q 000230 1021 NQRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLQILQAKL 1067 (1822)
Q Consensus 1021 ~~~~~G~dhp~tA~~l~nLA~iy~~lGd~eeAi~~lkkAL~I~k~~L 1067 (1822)
+|....++.+||.+|..+|++++|++.+++++++....+
T Consensus 141 --------~P~~~~a~~~L~~~l~~~g~~~~A~~~~~kal~l~~~~~ 179 (723)
T 4gyw_A 141 --------KPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQL 179 (723)
T ss_dssp --------CSCCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHHH
T ss_pred --------CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHH
T ss_conf --------999857774055677740149999999999999676578
No 9
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=1.00 E-value=1 Score=171.62 Aligned_cols=233 Identities=17% Similarity=0.140 Sum_probs=129.1
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC--------------------HH
Q ss_conf 9999999999999299589999887432111221599961179999999999998299--------------------89
Q 000230 865 GRTLLESSKTSLDKGKLEDAVNYGSKALSKLMSVCGPYHRMTAGAYSLLAVVLYHTGD--------------------FN 924 (1822)
Q Consensus 865 A~~L~~lG~~~~~qG~yeeAiell~eAL~l~e~i~G~dhp~~a~al~nLA~ly~~lGd--------------------~e 924 (1822)
+..+..+|.++...|++++|+.++.+++.+.... .+....+.++.++|.+|..+|+ ++
T Consensus 87 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~ 164 (406)
T 3sf4_A 87 AKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL--NDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQ 164 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 9999999999988479999999999999999865--32100689999999999973974444431000010466789999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 99999999999999950999923499999999999991997999999999999999834999966999999999999997
Q 000230 925 QATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSHPNTAATYINVAMMEEGL 1004 (1822)
Q Consensus 925 eAle~~qkAL~i~er~lG~dhp~ta~al~nLA~iy~~lG~~eeAl~ll~kAL~l~e~i~G~dhp~~a~al~nLA~il~~l 1004 (1822)
+|+.++++++.+.+.. .+.+..+.++.++|.+|..+|++++|+.++++++.+..... +....+.++.++|.+|..+
T Consensus 165 ~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~la~~~~~~ 240 (406)
T 3sf4_A 165 AAVDFYEENLSLVTAL--GDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFG--DKAAERRAYSNLGNAYIFL 240 (406)
T ss_dssp HHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHHHC
T ss_conf 9999999999999855--67477899999999999983689999999999999998627--8589999999999999884
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 99799999999999999996188958899999999999999059899999999999999997198989999999999999
Q 000230 1005 GNVHVALRYLHEALKCNQRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLQILQAKLGSEDLRTQDAAAWLEYF 1084 (1822)
Q Consensus 1005 G~yeeAl~~lekAL~i~~~~~G~dhp~tA~~l~nLA~iy~~lGd~eeAi~~lkkAL~I~k~~LG~dhp~t~~a~~~L~~l 1084 (1822)
|++++|+.++++++.+.... .++...+.++..+|.+|..+|++++|+.++++++.+....- +.+....
T Consensus 241 g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~--~~~~~~~-------- 308 (406)
T 3sf4_A 241 GEFETASEYYKKTLLLARQL--KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELN--DRIGEGR-------- 308 (406)
T ss_dssp TCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHH--------
T ss_pred CCHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC--CCHHHHH--------
T ss_conf 99699999999999998857--67648999999999999983769999999999999998557--8578999--------
Q ss_pred HHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHH-HHHCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 9999999999984999983011101634088899-9991999899999999999999726
Q 000230 1085 ESKALEQQEAARNGTPKPDASISSKGHLSVSDLL-DYIAPDTDSKARDAQRKARAKLKGK 1143 (1822)
Q Consensus 1085 ~qqAl~~qeA~~~g~~~p~~~~a~~~~lsi~~Ll-~yi~~Gd~ekAle~~kKAL~i~k~~ 1143 (1822)
.+..++ .|...|++++|+.++++|+++....
T Consensus 309 ----------------------------~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 340 (406)
T 3sf4_A 309 ----------------------------ACWSLGNAYTALGNHDQAMHFAEKHLEISREV 340 (406)
T ss_dssp ----------------------------HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT
T ss_pred ----------------------------HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf ----------------------------99999999998699999999999999999982
No 10
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=170.63 Aligned_cols=298 Identities=15% Similarity=0.098 Sum_probs=147.0
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 49999999999999299589999887432111221599961179999999999998299899999999999999995099
Q 000230 864 DGRTLLESSKTSLDKGKLEDAVNYGSKALSKLMSVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGL 943 (1822)
Q Consensus 864 ~A~~L~~lG~~~~~qG~yeeAiell~eAL~l~e~i~G~dhp~~a~al~nLA~ly~~lGd~eeAle~~qkAL~i~er~lG~ 943 (1822)
.+..++.+|..++..|++++|+.+|++++.+.. .+....+.++..+|.+|..+|++++|+.++++++.+.+.. .
T Consensus 47 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~----~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~ 120 (411)
T 4a1s_A 47 MCLELALEGERLCNAGDCRAGVAFFQAAIQAGT----EDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSM--N 120 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC----SCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--T
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC----CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC--C
T ss_conf 999999999999882759999999999987464----5846899999999999998789999999999999999871--5
Q ss_pred CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC-----------------
Q ss_conf 992349999999999999199799999999999999983499996699999999999999799-----------------
Q 000230 944 DHPDTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSHPNTAATYINVAMMEEGLGN----------------- 1006 (1822)
Q Consensus 944 dhp~ta~al~nLA~iy~~lG~~eeAl~ll~kAL~l~e~i~G~dhp~~a~al~nLA~il~~lG~----------------- 1006 (1822)
+++....++.++|.+|..+|++++|+.++++++.+..... +++..+.++.++|.+|..+|+
T Consensus 121 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~ 198 (411)
T 4a1s_A 121 DRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLG--DRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEA 198 (411)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 7367999999999999987899999999999999998710--44889999999999999837611133310011210699
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 79999999999999999618895889999999999999905989999999999999999719898999999999999999
Q 000230 1007 VHVALRYLHEALKCNQRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLQILQAKLGSEDLRTQDAAAWLEYFES 1086 (1822)
Q Consensus 1007 yeeAl~~lekAL~i~~~~~G~dhp~tA~~l~nLA~iy~~lGd~eeAi~~lkkAL~I~k~~LG~dhp~t~~a~~~L~~l~q 1086 (1822)
+++|+.++++++.+.... .+++..+.++.++|.+|..+|++++|+.++++++.+....- +......+...++.++.
T Consensus 199 ~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~la~~~~ 274 (411)
T 4a1s_A 199 LTRAVEFYQENLKLMRDL--GDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFG--DRAAERRANSNLGNSHI 274 (411)
T ss_dssp HHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHH
T ss_conf 999999999999999973--88799999999999999985882999999999999998519--96789999999999999
Q ss_pred HHHHHHH-------HHHCCCCCCCHHHHCCCCCCHHHHH-HHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 9999999-------9984999983011101634088899-9991999899999999999999726899981268884401
Q 000230 1087 KALEQQE-------AARNGTPKPDASISSKGHLSVSDLL-DYIAPDTDSKARDAQRKARAKLKGKPGQTCETVSDEYQKD 1158 (1822)
Q Consensus 1087 qAl~~qe-------A~~~g~~~p~~~~a~~~~lsi~~Ll-~yi~~Gd~ekAle~~kKAL~i~k~~lG~dHp~iA~~~~n~ 1158 (1822)
...+..+ ++.......+..... ..+..++ .|...|++++|+.++++++.+..... ++...+..+...
T Consensus 275 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~---~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l 349 (411)
T 4a1s_A 275 FLGQFEDAAEHYKRTLALAVELGEREVEA---QSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELG--DRIGEARACWSL 349 (411)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHTTCHHHHH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHHCCCHHHHH---HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC--CHHHHHHHHHHH
T ss_conf 87689999999999999998769879999---9999999999981889999999999999999879--858899999999
Q ss_pred HHHCCCCCHHHHHHHHHHHH
Q ss_conf 21089996034433788752
Q 000230 1159 EIVSPTSPVVENSSDKENKS 1178 (1822)
Q Consensus 1159 ~ilg~~hp~t~~s~~~L~~~ 1178 (1822)
+.+-...-+...+...+.+.
T Consensus 350 a~~~~~~g~~~~A~~~~~~a 369 (411)
T 4a1s_A 350 GNAHSAIGGHERALKYAEQH 369 (411)
T ss_dssp HHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHCCHHHHHHHHHHH
T ss_conf 99999805699999999999
Done!