BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000237
(1806 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O14981|BTAF1_HUMAN TATA-binding protein-associated factor 172 OS=Homo sapiens GN=BTAF1
PE=1 SV=2
Length = 1849
Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/1345 (37%), Positives = 744/1345 (55%), Gaps = 155/1345 (11%)
Query: 495 QKNCEFLQDCAIRFLCILSLDRFGDYVSDQVVAPVRETCAQALGAAFKYMHPSLVYETLY 554
Q++ E+L+D IR LC+ +LDRFGD+VSD+VVAPVRETCAQ LG K+M+ + V++T+
Sbjct: 333 QQHQEWLEDLVIRLLCVFALDRFGDFVSDEVVAPVRETCAQTLGVVLKHMNETGVHKTVD 392
Query: 555 ILLQMQRRPEWEIRHGSLLGIKYLVAVRQEMLHGLLGYVLPACRAGLEDPDDDVRAVAAD 614
+LL++ + +WE+RHG LLGIKY +AVRQ++++ LL VL GL+D DDDVRAVAA
Sbjct: 393 VLLKLLTQEQWEVRHGGLLGIKYALAVRQDVINTLLPKVLTRIIEGLQDLDDDVRAVAAA 452
Query: 615 ALIPTAAAIVALDGQTLHSIVMLLWDILLDLDDLSPSTSSVMNLLAEIYSQEEMIPKMVG 674
+L+P ++V L Q + I+ LWD LL+LDDL+ ST+S+M LL+ + + P++
Sbjct: 453 SLVPVVESLVYLQTQKVPFIINTLWDALLELDDLTASTNSIMTLLSSLLT----YPQVQQ 508
Query: 675 ATSKQEFDLNEVVRADDVGEGRDFQANPYMLSMLAPRLWPFMRHSITSVRHSAIRTLERL 734
+ +Q L++L PR+WPF+ H+I+SVR +A+ TL L
Sbjct: 509 CSIQQS------------------------LTVLVPRVWPFLHHTISSVRRAALETLFTL 544
Query: 735 LEAGYKRMIAESSGGSFWPSFILGDTLRIVFQNLLLESNEEILQCSDRVW-RLLVQSPVE 793
L + S W IL D LR +FQ +LES++EIL +VW LL ++ V+
Sbjct: 545 LST-------QDQNSSSWLIPILPDMLRHIFQFCVLESSQEILDLIHKVWMELLSKASVQ 597
Query: 794 DLEAAGGKFMSSWIELATTPFGSSLDATKMFWPVALPRKSHFKAAAKMRAVKLENDSSGS 853
+ AA +M +W+ L M P LP + K RA + + G
Sbjct: 598 YVVAAACPWMGAWLCL-------------MMQPSHLPIDLNMLLEVKARA---KEKTGGK 641
Query: 854 VDLPQERNGDTSTNSVKITVGSDLEMSVTNTRVVTASALGIFASKLHEGSIQFVIDPLWN 913
V Q +N + + G+D M TR + A+KL + DP N
Sbjct: 642 VRQGQSQNKEVLQEYI---AGADTIMEDPATRDFVVMRARMMAAKLLGALCCCICDPGVN 698
Query: 914 ALT------------------SFSGVQRQVAAMVFISWF---KEIKSEELPGSAAVLPNL 952
+T S S +QR A+V W KE K+ L AV P L
Sbjct: 699 VVTQEIKPAESLGQLLLFHLNSKSALQRISVALVICEWAALQKECKAVTL----AVQPRL 754
Query: 953 PGHLKQWLLDLLACSDPTYPTKDSLLPYAELSRTYGKMRNEASQLLRAMETSSMFTEMLS 1012
LD+L+ L Y E++ + +M+NE QL+ ++ + + E+
Sbjct: 755 --------LDILS----------EHLYYDEIAVPFTRMQNECKQLISSL--ADVHIEV-- 792
Query: 1013 ANEIDVESLSADNAISFASKLQLLGSNSDGSESLSRQMLDDIESIKQRMLTTSGYLKCVQ 1072
N ++ L+ D A + + + + S L+ Q+L ++S +Q++ T
Sbjct: 793 GNRVNNNVLTIDQASDLVTTV---FNEATSSFDLNPQVLQQLDSKRQQVQMTVTETNQEW 849
Query: 1073 SNLHVTVSALVAAAVVWMSELPARLNPIILPLMASIKREQEEKLQEKAAEALAELIADCI 1132
L + V A AVV + +LP +LNPII PLM +IK+E+ +Q AA+ +A+L+ C
Sbjct: 850 QVLQLRVHTFAACAVVSLQQLPEKLNPIIKPLMETIKKEENTLVQNYAAQCIAKLLQQCT 909
Query: 1133 ARKPSPNDKLIKNICSLTSMDPCETP--------QAAAMGSMEIIDDQDFLSF------- 1177
R P PN K+IKN+CS +DP TP Q+ S ++D +
Sbjct: 910 TRTPCPNSKIIKNLCSSLCVDPYLTPCVTCPVPTQSGQENSKGSTSEKDGMHHTVTKHRG 969
Query: 1178 ------------------GSSTGKQKSRAHMLAGGE--------DRSRVEGFISRRGSEL 1211
G + K++ L G D ++ + RRG+E
Sbjct: 970 IITLYRHQKAAFAITSRRGPTPKAVKAQIADLPAGSSGNILVELDEAQKPYLVQRRGAEF 1029
Query: 1212 ALRHLCGKFGVSLFDKLPKLWDCLTEVLIPDGPSNKKKIILAIESVRDP-QILINNIQLV 1270
AL + FG + KLP LWD + L N ++ P Q L+N++Q+
Sbjct: 1030 ALTTIVKHFGGEMAVKLPHLWDAMVGPLRNTIDINNFDGKSLLDKGDSPAQELVNSLQVF 1089
Query: 1271 RSIAPMLDEALKPKLLTLLPCIFKCVCHSHVSVRLAASRCITSMAKSMTINVMAAVVENA 1330
+ A +D L P L+ LP ++ C+ + +VR A+RC+ M+K T+ M +E
Sbjct: 1090 ETAAASMDSELHPLLVQHLPHLYMCLQYPSTAVRHMAARCVGVMSKIATMETMNIFLEKV 1149
Query: 1331 IPMLGDMTSVHARQGAGMLISLLVQGLGAELVPYAPLLVVPLLRCMSDCDQSVRQSVTRS 1390
+P LG + ++GA ++ +++ L +VPY LLVVP+L MSD SVR T+
Sbjct: 1150 LPWLGAIDDSVKQEGAIEALACVMEQLDVGIVPYIVLLVVPVLGRMSDQTDSVRFMATQC 1209
Query: 1391 FASLVPLLPLARGV-SPPTGLTEGLSRNAEDAQFLEQLLDNSHIDDYKLGTELKVTLRRY 1449
FA+L+ L+PL G+ PP E + A++ FLEQLLD +++YK+ + LR+Y
Sbjct: 1210 FATLIRLMPLEAGIPDPPNMSAELIQLKAKERHFLEQLLDGKKLENYKIPVPINAELRKY 1269
Query: 1450 QQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAER---RASNSIEEIHP--S 1504
QQ+G+NWLAFL ++KLHGILCDDMGLGKTLQ+ I+A D R A + + E P S
Sbjct: 1270 QQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQEYARSKLAECMPLPS 1329
Query: 1505 LIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFDKHNVIITSYDVVRKD 1564
L++CP TL GHW E+ KF ++ L Y G +RI L+ Q +HN+I+ SYDVVR D
Sbjct: 1330 LVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKRHNLIVASYDVVRND 1389
Query: 1565 ADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPIQNNITDLWSLFDF 1624
D+ + +NYCILDEGH+IKN K+K++ AVKQL A +R+ILSGTPIQNN+ +LWSLFDF
Sbjct: 1390 IDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSLFDF 1449
Query: 1625 LMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEALHKQVMPFLLRRTKDEVL 1684
LMPGFLGTERQF A YGKP++A+RD++ S+++ EAGVLAM+ALH+QV+PFLLRR K++VL
Sbjct: 1450 LMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDALHRQVLPFLLRRMKEDVL 1509
Query: 1685 SDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDESADKGEGNNVSAKASTH 1744
DLP KIIQD YC LS +Q++LYE F+ S+AK ++ V +++ E + KA+ H
Sbjct: 1510 QDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKCDVDETVSSATLSEETEKPKL--KATGH 1567
Query: 1745 VFQALQYLLKLCSHPLLVLGDKSPE 1769
VFQALQYL KLC+HP LVL + PE
Sbjct: 1568 VFQALQYLRKLCNHPALVLTPQHPE 1592
Score = 171 bits (432), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 124/354 (35%), Positives = 183/354 (51%), Gaps = 58/354 (16%)
Query: 6 SRLNRLLTLLDTGSTQATRFTAARQIGEIAKTHPQDLNSLLRKVSQYLRSKSWDTRVAAA 65
SRL+RL LLDTG+T TR AA+Q+GE+ K HP +LN+LL KV YLRS +WDTR+AA
Sbjct: 4 SRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLIYLRSANWDTRIAAG 63
Query: 66 HAIGAIAQNVKLTTLKELFSCVETKMSEVGISGIVEDMVAWPNFHSKIVASVSFTSFDLN 125
A+ AI +NV E T+ S + ED S ++F FD+
Sbjct: 64 QAVEAIVKNV-----PEWNPVPRTRQEPTSESSM-ED--------SPTTERLNFDRFDIC 109
Query: 126 KVLEFGA-LLASGGQEYDIAIDNSK--NPRERLARQKQNLKRRLGLDVCEQF-VDLNDMI 181
++L+ GA LL S G E+++ + S +P+ER+ARQ++ L+++LGL++ E + ++
Sbjct: 110 RLLQHGASLLGSAGAEFEVQDEKSGEVDPKERIARQRKLLQKKLGLNMGEAIGMSTEELF 169
Query: 182 KDEDLIVHKLNSHGNGFDRRFYTSASAHNIQR----LVSSMVPSVISKRPSARELNMLKR 237
DEDL YT SA + + + ++ S S R+ N KR
Sbjct: 170 NDEDL---------------DYTPTSASFVNKQPTLQAAELIDSEFRAGMSNRQKNKAKR 214
Query: 238 KAKISSKDQSKSWSE---------DGDMEVPHAQ--NVTTPKGSCGDPFNSNKADAVLD- 285
AK+ +K +S+ E DG+ E + NV + ++N + ++D
Sbjct: 215 MAKLFAKQRSRDAVETNEKSNDSTDGEPEEKRRKIANVVINQ-------SANDSKVLIDN 267
Query: 286 --EDSSEHEGDGLWPFRSFVEQLILDMFDPVWEVRHGSVMALREILTHHGASAG 337
+ SS E WP SF E+L D+F+P WEVRHG+ LREIL HG S G
Sbjct: 268 IPDSSSLIEETNEWPLESFCEELCNDLFNPSWEVRHGAGTGLREILKAHGKSGG 321
>sp|O43065|MOT1_SCHPO Probable helicase mot1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=mot1 PE=1 SV=4
Length = 1953
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/1342 (35%), Positives = 697/1342 (51%), Gaps = 139/1342 (10%)
Query: 495 QKNCEFLQDCAIRFLCILSLDRFGDYVSDQVVAPVRETCAQALGAAFKYMHPSLVYETLY 554
Q N ++ D R C+ +LDRFGDY++DQVVAP+RE+ +Q LG A Y+ V+
Sbjct: 411 QLNKKYFDDLLCRIACVFALDRFGDYLADQVVAPIRESVSQVLGVALIYVPNDSVFSMYK 470
Query: 555 ILLQMQRRPE-------WEIRHGSLLGIKYLVAVRQEMLHGLLGYV---LPACRAGLEDP 604
+L + + E WE HG +LGIKYLVAV+ + Y+ + GL +
Sbjct: 471 VLHSLVFQNELGLTNTVWEAAHGGMLGIKYLVAVKYPLFFSHSDYLDSLINTVIHGLANH 530
Query: 605 DDDVRAVAADALIPTAAAIVALDGQTLHSIVMLLWDILLDL-DDLSPSTSSVMNLLAEIY 663
DDDVRAV+A L+P A +V + +++ +LWD L D+ DDLS STS VM+LL+ +
Sbjct: 531 DDDVRAVSALTLLPIADKLVQEKLSSCKNLLKVLWDCLDDVKDDLSSSTSCVMDLLSSLC 590
Query: 664 SQEEMIPKMV-GATSKQEFDLNEVVRADDVGEGRDFQANPYMLSMLAPRLWPFMRHSITS 722
S E++ M A S EF +V PRL+ MR+++T
Sbjct: 591 SFTEVMNLMQETANSDPEFSFETLV----------------------PRLFHLMRYTLTG 628
Query: 723 VRHSAIRTLERLLEAGYKRMIAESSGGSFWPSFILGDTLRIVFQNLLLESNEEILQCSDR 782
VR S + L + + ++S S+I G TLR+ FQN+LLE E+I + S
Sbjct: 629 VRRSVVYALTKFISV-------QTSC-----SWITGLTLRLCFQNVLLEQQEDISKSSCE 676
Query: 783 VWRLLVQSPVEDLEAAGGKFMSSWIE----LATTPFGS-----SLDATKMFWPVALP--- 830
+ + ++ D + K + S IE ++ TP GS LD T + P P
Sbjct: 677 LAQRVMDILYRDGPESFSKLLYSHIEPMLKVSITPIGSFRRPYPLDTTLIVKPSGQPYAP 736
Query: 831 -----RKSHFKAAAKMRAV-KLENDSSGS----VDLPQERNGDTSTNSVKITVGSDLEMS 880
R ++ + R + ++D GS VD P NGD VG E
Sbjct: 737 STSRERNNNISELSNSRTKHRAKDDPKGSFCFSVDEPM-LNGDVEF------VG---EER 786
Query: 881 VTNTRVVTASALGIFASKLHEGSIQFVIDPLWNALTSFSGVQRQVAAMVFISWFKEIKSE 940
+ R+ +S LG + I P A + S V I F E++
Sbjct: 787 MLKARLRASSLLGRIIGRWKRDEILLFFKPFLQACLTSSFSTPVVLGSRLIESFFEVEDN 846
Query: 941 ELPGSAAVLPNLPGHLKQWLLDLLACSDPTYPTKDSLLPYAELSRTYGKMRNEASQLLRA 1000
+L K L LL T P ++ YA L +R + + LL
Sbjct: 847 DLTIQ-----------KDELYHLLCDQFATVPREN----YANLVSQLHVVRAQCNALLNT 891
Query: 1001 -METSSMFTEMLSANEIDVESLSADNAISF--ASKLQLLGSNSDG-----SESLSRQMLD 1052
++ + + + + V+ I+F A +L+G + S S Q
Sbjct: 892 FLDVGRLSRSKIPSLAVVVKGDPEAGPIAFGIADAEKLVGPTYENLCKLLSPSQKAQSSK 951
Query: 1053 DIESIKQRMLTTSGYLKCVQSNLHVTVSALVAAAVVWMSELPARLNPIILPLMASIKREQ 1112
+ IK ++ K + + SA +A+A+V +LP +LN II +M SIK+EQ
Sbjct: 952 ALNEIKYLIIDEISIYKIAKERQDIQCSASIASAMVTYDKLPKKLNSIIKGIMESIKKEQ 1011
Query: 1113 EEKLQEKAAEALAELIADCIAR-KPSPNDKLIKNICSLTSMDPCETPQAAAMGSMEII-- 1169
LQ +A A+ +LI+ C + ++K+++N+C+ MD ETP G I+
Sbjct: 1012 FSCLQMHSASAMMKLISACYKESRQVISEKIVRNLCAYVCMDTTETPIFHDSGKNGILSL 1071
Query: 1170 ------DDQDFLSFGS----STGKQKSRAHMLAGGEDRSRVEGFISRRGSELALRHLCGK 1219
DD D G S R L+ D+ + R G++L L+ +
Sbjct: 1072 HSIGTSDDNDEQVSGKLVDDSDDVSNDRKSSLSSVSDKD--AAVLQRMGAQLTLQQMAQN 1129
Query: 1220 FGVSLFDKLPKLWDCLTEVLIPDGPSNKKKIILAIE--SVRDPQILINNIQLVRSIAPML 1277
FG SLF ++P L CL +P + ++ S Q L++ + ++R + L
Sbjct: 1130 FGSSLFSRVPVLSQCL---FVPLQQYAESGFPSEVDQASCTVGQDLLDAMSILRFLVAYL 1186
Query: 1278 DEALKPKLLTLLPCIFKCVCHSHVSVRLAASRCITSMAKSMTINVMAA--VVENAIPMLG 1335
D L+ ++++ LP + + ++ +VR AS+C ++ +S A +VE+ +P+LG
Sbjct: 1187 DSGLQSEIVSTLPHLLATLQSNYSAVRNMASKCFAAITESNAAGSKALHLLVEDVVPLLG 1246
Query: 1336 DMTSVHARQGAGMLISLLVQGLGAELVPYAPLLVVPLLRCMSDCDQSVRQSVTRSFASLV 1395
D +S RQGA I +VQ LG ++PY L++PLL MSD DQ VR T SFA+LV
Sbjct: 1247 DASSTIHRQGAIECIYHVVQRLGVRILPYILYLIIPLLGRMSDADQDVRVLATTSFATLV 1306
Query: 1396 PLLPLARGVSPPTGLTEGL--SRNAEDAQFLEQLLDNSHIDDYKLGTELKVTLRRYQQEG 1453
L+PL G+ P L + L SR E +FLEQ+L+ S ++ + + + LR+YQQEG
Sbjct: 1307 KLVPLEAGLPDPPDLPQYLLDSREKE-RKFLEQMLNPSKVEAFSIPVPISADLRKYQQEG 1365
Query: 1454 INWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRA----SNSIEEIH-PSLIIC 1508
+NWLAFL +++LHGILCDDMGLGKTLQ IVASD R+ S S + H PSLI+C
Sbjct: 1366 VNWLAFLNKYELHGILCDDMGLGKTLQTICIVASDHYNRQKLFEESGSPKFAHVPSLIVC 1425
Query: 1509 PSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFDKHNVIITSYDVVRKDADYL 1568
PSTL GHW E+ + + YVG +R +R + K +V++TSYD+ R D D L
Sbjct: 1426 PSTLAGHWQQELSTY--APFLKVSAYVGPPAERAKIRSKMKKSDVVVTSYDICRNDVDEL 1483
Query: 1569 GQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPIQNNITDLWSLFDFLMPG 1628
++ WNYC+LDEGH+IKN+++K+T AVK L++ HRLILSGTPIQNN+ +LWSLFDFLMPG
Sbjct: 1484 VKIDWNYCVLDEGHVIKNARAKLTKAVKSLRSYHRLILSGTPIQNNVLELWSLFDFLMPG 1543
Query: 1629 FLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEALHKQVMPFLLRRTKDEVLSDLP 1688
FLGTE+ FQ + +P+ A+RD+K S+K+ E G LA+EA+HKQV+PF+LRR K++VL+DLP
Sbjct: 1544 FLGTEKTFQERFVRPIAASRDAKSSSKERERGTLALEAIHKQVLPFMLRRLKEDVLADLP 1603
Query: 1689 EKIIQDRYCDLSAVQLKLYEKF-SGSQAKQEISSMVKVDESADKGEGNNVSAKASTHVFQ 1747
KIIQD YCD+S +Q KL F S +E+ D+ +K +G H+FQ
Sbjct: 1604 PKIIQDYYCDMSDLQRKLLNDFVSQLNINEELE-----DDETEKTQGTRKKKSQKAHIFQ 1658
Query: 1748 ALQYLLKLCSHPLLVLGDKSPE 1769
ALQY+ KLC+HP L+L +K P+
Sbjct: 1659 ALQYMRKLCNHPALILTEKHPK 1680
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 56/71 (78%)
Query: 5 SSRLNRLLTLLDTGSTQATRFTAARQIGEIAKTHPQDLNSLLRKVSQYLRSKSWDTRVAA 64
++RL+RL+ LLD+GST R TAA+QIG+I K HP +L +LL +V YL+SK+WDTRVAA
Sbjct: 2 TTRLDRLVVLLDSGSTSVVRETAAKQIGDIQKVHPDELYNLLGRVVPYLKSKNWDTRVAA 61
Query: 65 AHAIGAIAQNV 75
A AIG I +NV
Sbjct: 62 AKAIGGIVENV 72
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 113/240 (47%), Gaps = 35/240 (14%)
Query: 117 VSFTSFDLNKVLEFGA-LLASGGQEYDIAIDNSKNPRERLARQKQNLKRRLGLDVCEQFV 175
+SF SFD+ VL+ G LL S ++YD+ N N +Q NLK RL D+ +++
Sbjct: 176 LSFESFDIANVLKAGKKLLGSASRDYDV---NPANYSTHYLQQLSNLKSRL--DLAGEYL 230
Query: 176 DLNDMIKDEDLIVHKLNSH-GNGFDRRFYTSASAH----NIQRLVSSMVPSVISKRPSAR 230
D D I++ L + G+ TS H N + + PS + SAR
Sbjct: 231 D--------DSIMNDLGDNVGSNSKGSPTTSIPEHKTSINNNKPEDTPTPSE-NVHLSAR 281
Query: 231 ELNMLKRKAKISSKDQSKSWSEDGDMEVPHAQNVTT-PKGSCGDPFNSNKADAVLDEDSS 289
+ N LKRKA+ K+ K D + H QN T+ G +N A + D
Sbjct: 282 QRNALKRKAR-QMKNSQKVRVIDVAPTLVHQQNSTSSADKKTGADYNFT-AQSRSDRLVV 339
Query: 290 EHEG------------DGLWPFRSFVEQLILDMFDPVWEVRHGSVMALREILTHHGASAG 337
EH+ D +WPF + VE L++DMFDP WE+RHG+ M LREI+ + G G
Sbjct: 340 EHKAPIVPSAAVAVTSDSVWPFETLVELLLIDMFDPSWEIRHGACMGLREIIRYAGFGYG 399
>sp|P32333|MOT1_YEAST TATA-binding protein-associated factor MOT1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MOT1 PE=1 SV=1
Length = 1867
Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/1323 (34%), Positives = 686/1323 (51%), Gaps = 126/1323 (9%)
Query: 496 KNCEFLQDCAIRFLCILSLDRFGDYVSDQVVAPVRETCAQALGAAFKYMHPSLVYETLYI 555
+N L+D A R L + +LDRFGDYV D VVAPVRE+ AQ L A ++ +L +
Sbjct: 342 RNSRSLEDLASRLLTVFALDRFGDYVYDTVVAPVRESVAQTLAALLIHLDSTLSIKIFNC 401
Query: 556 LLQMQRRPE---------WEIRHGSLLGIKYLVAVRQEML--HGLLGYVLPACRAGLEDP 604
L Q+ + WE HG LLGI+Y V+++ L HGLL V+ GL
Sbjct: 402 LEQLVLQDPLQTGLPNKIWEATHGGLLGIRYFVSIKTNFLFAHGLLENVVRIVLYGLNQS 461
Query: 605 DDDVRAVAADALIPTAAAIVALDGQTLHSIVMLLWDILLDLDD-LSPSTSSVMNLLAEIY 663
DDDV++VAA L P + V L+ T+ +V +W +L LDD +S S S+M+LLA++
Sbjct: 462 DDDVQSVAASILTPITSEFVKLNNSTIEILVTTIWSLLARLDDDISSSVGSIMDLLAKLC 521
Query: 664 SQEEMIPKMVGATSKQEFDLNEVVRADDVGEGRDFQ-ANPYMLSMLAPRLWPFMRHSITS 722
+E++ D+ + + + + + L P+L+PF+RHSI+S
Sbjct: 522 DHQEVL---------------------DILKNKALEHPSEWSFKSLVPKLYPFLRHSISS 560
Query: 723 VRHSAIRTLERLLEAGYKRMIAESSGGSFWPSFILGDTLRIVFQNLLLESNEEILQCSDR 782
VR + + L L I + S + W + G R+VFQN+LLE N E+LQ S
Sbjct: 561 VRRAVLNLLIAFLS------IKDDSTKN-W---LNGKVFRLVFQNILLEQNPELLQLSFD 610
Query: 783 VWRLL-----VQSPVEDLEAAGGKFMSSWIELATTPFGSSLDATKMFWPVALPRKSHFKA 837
V+ L V+ + L+ K + + L TP G M L H++
Sbjct: 611 VYVALLEHYKVKHTEKTLDHVFSKHLQPILHLLNTPVGEKGKNYAMESQYILKPSQHYQL 670
Query: 838 AAKMRAVKLENDSSGSVDLPQER---NGDTSTNSVKITV-GSDLEMSVTNTRVVTASALG 893
+ + E + + +P+ N D + IT+ G D+ + NTR++ A A
Sbjct: 671 HPEKKRSISETTTDSDIPIPKNNEHINIDAPMIAGDITLLGLDV---ILNTRIMGAKAFA 727
Query: 894 IFASKLHEGSIQ-FVIDPLWNALTSFSGVQRQVAAMVFI----SWF-KEIKSEELPGSAA 947
+ S + ++Q F + L L R +A ++ SW K + E+LP +
Sbjct: 728 LTLSMFQDSTLQSFFTNVLVRCLELPFSTPRMLAGIIVSQFCSSWLQKHPEGEKLPSFVS 787
Query: 948 VLPNLPGHLKQWLLDLLACSDPTYPTKDSLLPYAELSRTYGKMRNEASQLLRAMETSSMF 1007
+ + P KQ L +D + EL + +R + LL M
Sbjct: 788 EIFS-PVMNKQLL------------NRDEFPVFRELVPSLKALRTQCQSLLATFVDVGML 834
Query: 1008 TEMLSANEIDV---ESLSADNAISFASKLQLLGSNSDG---SESLSRQML--DDIESIKQ 1059
+ N V E+ + +A + ++ G D S + S ++L +E K
Sbjct: 835 PQYKLPNVAIVVQGETEAGPHAFGVETAEKVYGEYYDKMFKSMNNSYKLLAKKPLEDSKH 894
Query: 1060 RMLTTSGYLKCVQSNLHVTVSALVAAAVVWMSELPARLNPIILPLMASIKREQEEKLQEK 1119
R+L K ++ A A++++ LP +LNPII LM S+K E+ EKLQ
Sbjct: 895 RVLMAINSAKESAKLRTGSILANYASSILLFDGLPLKLNPIIRSLMDSVKEERNEKLQTM 954
Query: 1120 AAEALAELIADCIAR-KPSPNDKLIKNICSLTSMDPCETPQAAAMGSMEIIDDQDFLSFG 1178
A E++ LI + K + + K++KN+C +D E P + + + L+
Sbjct: 955 AGESVVHLIQQLLENNKVNVSGKIVKNLCGFLCVDTSEVPDFSVNAEYK----EKILTLI 1010
Query: 1179 SSTGKQKSRAHMLAGGED----RSRVEGFISRRGSELALRHLCGKFGVSLFDKLPKLWDC 1234
+ +A +D + E + R+G + L+ L G S+ KLP+L
Sbjct: 1011 KESNS-------IAAQDDINLAKMSEEAQLKRKGGLITLKILFEVLGPSILQKLPQLRSI 1063
Query: 1235 LTEVLIPDGPSNKKKIILAIESVRDPQILINNIQLVRSIAPMLDEALKP-KLLTLLPCIF 1293
L + L K+ Q ++++ ++R++ P + ++L+ ++ T P +
Sbjct: 1064 LFDSLSDHENEEASKV-----DNEQGQKIVDSFGVLRALFPFMSDSLRSSEVFTRFPVLL 1118
Query: 1294 KCVCHSHVSV-RLAASRCITSMAKSMTINVMAAVVENAIPMLGDMTSVHARQGAGMLISL 1352
S++SV R +A+R +AK ++ VMA + +P++ S+ RQG+ LI
Sbjct: 1119 -TFLRSNLSVFRYSAARTFADLAKISSVEVMAYTIREILPLMNSAGSLSDRQGSTELIYH 1177
Query: 1353 LVQGLGAELVPYAPLLVVPLLRCMSDCDQSVRQSVTRSFASLVPLLPLARGVSPPTGLTE 1412
L + +++PY L+VPLL MSD ++ VR T +FAS++ L+PL G++ P GL E
Sbjct: 1178 LSLSMETDVLPYVIFLIVPLLGRMSDSNEDVRNLATTTFASIIKLVPLEAGIADPKGLPE 1237
Query: 1413 GLSRNAE-DAQFLEQLLDNSHIDDYKLGTELKVTLRRYQQEGINWLAFLKRFKLHGILCD 1471
L + E + F++Q++D S +KL +K TLR+YQQ+G+NWLAFL ++ LHGILCD
Sbjct: 1238 ELVASRERERDFIQQMMDPSKAKPFKLPIAIKATLRKYQQDGVNWLAFLNKYHLHGILCD 1297
Query: 1472 DMGLGKTLQASAIVASDIAERR----ASNSIE-EIHPSLIICPSTLVGHWAFEIEKFIDV 1526
DMGLGKTLQ I+ASD R+ + S+E PSLIICP +L GHW E +++
Sbjct: 1298 DMGLGKTLQTICIIASDQYLRKEDYEKTRSVESRALPSLIICPPSLTGHWENEFDQY--A 1355
Query: 1527 SLMSTLQYVGSAQDRIALREQFDKHNVIITSYDVVRKDADYLGQLLWNYCILDEGHIIKN 1586
+ + Y G R+ LR Q ++I+TSYDV R D L + +NYC+LDEGHIIKN
Sbjct: 1356 PFLKVVVYAGGPTVRLTLRPQLSDADIIVTSYDVARNDLAVLNKTEYNYCVLDEGHIIKN 1415
Query: 1587 SKSKITVAVKQLKAAHRLILSGTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGKPLVA 1646
S+SK+ AVK++ A HRLIL+GTPIQNN+ +LWSLFDFLMPGFLGTE+ FQ + KP+ A
Sbjct: 1416 SQSKLAKAVKEITANHRLILTGTPIQNNVLELWSLFDFLMPGFLGTEKMFQERFAKPIAA 1475
Query: 1647 ARDSKCSAKDAEAGVLAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKL 1706
+R+SK S+K+ EAGVLA+EALHKQV+PF+LRR K++VLSDLP KIIQD YC+L +Q +L
Sbjct: 1476 SRNSKTSSKEQEAGVLALEALHKQVLPFMLRRLKEDVLSDLPPKIIQDYYCELGDLQKQL 1535
Query: 1707 YEKFSGSQAKQEISSMVKVDESADKGEGNNVSAKASTHVFQALQYLLKLCSHPLLVLGDK 1766
Y F+ Q K + ++ E AD H+FQALQY+ KLC+HP LVL
Sbjct: 1536 YMDFTKKQ-KNVVEKDIENSEIAD----------GKQHIFQALQYMRKLCNHPALVLSPN 1584
Query: 1767 SPE 1769
P+
Sbjct: 1585 HPQ 1587
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 158/380 (41%), Gaps = 102/380 (26%)
Query: 1 MAQQSSRLNRLLTLLDTGSTQATRFTAARQIGEIAKTHPQDLNSLLRKVSQYLRSKSWDT 60
M + SRL+R + L++TGSTQ R AA Q+G++AK HP+D+ SLL +V +L K W+T
Sbjct: 1 MTSRVSRLDRQVILIETGSTQVVRNMAADQMGDLAKQHPEDILSLLSRVYPFLLVKKWET 60
Query: 61 RVAAAHAIGAIA-----------------------QNVKLTTLKELFSCVETKMSEVGIS 97
RV AA A+G I N ++ E+ +E ++
Sbjct: 61 RVTAARAVGGIVAHAPSWDPNESDLVGGTNEGSPLDNAQVKLEHEMKIKLEEATQNNQLN 120
Query: 98 GIVEDMVAWPNFHSKIVASVSFTSFDLNKVLEFG-ALLASGGQEYDIAIDNSKNPRERLA 156
+ ED H S + + LN++L+ G LLAS +Y++ L
Sbjct: 121 LLQED------HHLS-----SLSDWKLNEILKSGKVLLASSMNDYNV-----------LG 158
Query: 157 RQKQNLKRRLGLDVCEQFVDLNDMIKDEDLIVHKLNSHGNGFDRRFYTSASAHNIQRLVS 216
+ N++++ D IK E S N D+ ++A+
Sbjct: 159 KADDNIRKQAK----------TDDIKQE-------TSMLNASDKANENKSNAN------- 194
Query: 217 SMVPSVISKRPSARELNMLKRKAKISSKDQSKSWSEDGDMEVP----HAQNVTTPKGSCG 272
+ SAR L M +RK K+S+K+ K + + V + +N+T S
Sbjct: 195 ---------KKSARMLAMARRKKKMSAKNTPKHPVDITESSVSKTLLNGKNMTNSAASLA 245
Query: 273 DPFNSNKADAVL------DEDS-----------SEHE--GDGLWPFRSFVEQLILDMFDP 313
SN+ + L DE +HE +W F+ E L+ ++
Sbjct: 246 TSPTSNQLNPKLEITEQADESKLMIESTVRPLLEQHEIVAGLVWQFQGIYELLLDNLMSE 305
Query: 314 VWEVRHGSVMALREILTHHG 333
WE+RHG+ + LRE++ H
Sbjct: 306 NWEIRHGAALGLRELVKKHA 325
>sp|Q03468|ERCC6_HUMAN DNA excision repair protein ERCC-6 OS=Homo sapiens GN=ERCC6 PE=1 SV=1
Length = 1493
Score = 187 bits (476), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 118/353 (33%), Positives = 177/353 (50%), Gaps = 33/353 (9%)
Query: 1426 QLLDNSHIDDYKLGTELKV------TLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTL 1479
+L D+S D + KV L +YQQ G+ WL L + GIL D+MGLGKT+
Sbjct: 481 KLEDDSEESDAEFDEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTI 540
Query: 1480 QASAIVA----SDIAERRASNSIEEIHPSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYV 1535
Q A +A S I R ++ E + P++I+CP+T++ W E + ++ L
Sbjct: 541 QIIAFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHET 600
Query: 1536 GSAQDRIA--LREQFDKHNVIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITV 1593
GS + +R+ H ++ITSY +R D + + W+Y ILDEGH I+N + +T+
Sbjct: 601 GSYTHKKEKLIRDVAHCHGILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTL 660
Query: 1594 AVKQLKAAHRLILSGTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGKPLVAARDSKCS 1653
A KQ + HR+ILSG+P+QNN+ +LWSLFDF+ PG LGT F + P+ S S
Sbjct: 661 ACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNAS 720
Query: 1654 AKDAEAGVLAMEALHKQVMPFLLRRTKDEVLS--DLPEKIIQDRYCDLSAVQLKLYEKFS 1711
+ L + P+LLRR K +V LP+K Q +C L+ Q K+Y+ F
Sbjct: 721 PVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFV 780
Query: 1712 GSQAKQEISSMVKVDESADKGEGNNVSAKASTHVFQALQYLLKLCSHPLLVLG 1764
S +E+ ++ +F L L K+C+HP L G
Sbjct: 781 DS---KEVYRIL----------------NGEMQIFSGLIALRKICNHPDLFSG 814
>sp|Q6FV37|INO80_CANGA Putative DNA helicase INO80 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=INO80 PE=3
SV=1
Length = 1484
Score = 187 bits (474), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 117/336 (34%), Positives = 180/336 (53%), Gaps = 39/336 (11%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
L TL+ YQ +G+NWLA L ++GIL D+MGLGKT+Q+ +++A + E
Sbjct: 718 LACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAH----------LAEH 767
Query: 1502 H----PSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFDKHN----- 1552
H P L++ P++ + +W EI KF V L Y GSA DR LR+ +D+ N
Sbjct: 768 HNIWGPFLVVTPASTLHNWVNEISKF--VPQFKILPYWGSANDRKVLRKFWDRKNLRYSE 825
Query: 1553 -----VIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILS 1607
V+ITSY +V DA YL ++ W Y ILDE IK+S+S + +RL+L+
Sbjct: 826 KSPFHVMITSYQMVVADASYLQKMKWQYMILDEAQAIKSSQSSRWKNLLSFHCRNRLLLT 885
Query: 1608 GTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEAL 1667
GTPIQNN+ +LW+L F+MP + +F + + + + + S + + L
Sbjct: 886 GTPIQNNMQELWALLHFIMPSLFDSHDEFNEWFSRDIESHAEGNSSLNQQQ-----LRRL 940
Query: 1668 HKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDE 1727
H + PF+LRR K V S+L +KI D CDL+ Q KLY+ K ++SS E
Sbjct: 941 HMILKPFMLRRIKKNVQSELGDKIEIDVMCDLTQRQTKLYQVL-----KSQMSSNYDAIE 995
Query: 1728 SADKGEGNNVSAKASTH--VFQALQYLLKLCSHPLL 1761
+A EG++++ ++ + A+ K+C+HP L
Sbjct: 996 NA-AAEGSDIAGGGNSDQSIINAVMQFRKVCNHPDL 1030
>sp|Q6BKC2|SWR1_DEBHA Helicase SWR1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=SWR1 PE=3 SV=2
Length = 1616
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 128/385 (33%), Positives = 188/385 (48%), Gaps = 55/385 (14%)
Query: 1405 SPPTGLTEGLSRNAEDAQFLEQLLDNSHIDDYKLGTELKVTLRRYQQEGINWLAFLKRFK 1464
+P + + ++ LE+ ++ S + D L L+ TLR YQ++G+NWLA L
Sbjct: 740 TPKSSEDPKMDEKENESDVLEEEVNGSKVRDVPLPPLLRGTLRPYQKQGLNWLASLYNNG 799
Query: 1465 LHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEIHPSLIICPSTLVGHWAFEIEKFI 1524
+GIL D+MGLGKT+Q +++A AE P LI+ P++++ +W E +KF
Sbjct: 800 TNGILADEMGLGKTIQTISLLAYLAAEHHIWG------PHLIVVPTSVMLNWEMEFKKF- 852
Query: 1525 DVSLMSTLQYVGSAQDRIALREQFDKHN---VIITSYDVVRKDADYLGQLLWNYCILDEG 1581
L Y GS Q R R+ ++K N V ITSY +V D + W Y ILDE
Sbjct: 853 -APGFKVLTYYGSPQQRAQKRKGWNKPNAFHVCITSYQLVVHDHQSFKRRRWRYMILDEA 911
Query: 1582 HIIKNSKSKITVAVKQLKAAHRLILSGTPIQNNITDLWSLFDFLMP----------GFLG 1631
H IKN +S A+ +RL+L+GTP+QNN+ +LWSL FLMP GF
Sbjct: 912 HNIKNFRSARWRALLNFNTENRLLLTGTPLQNNLMELWSLLYFLMPSSKVNQAMPDGFAN 971
Query: 1632 TERQFQATYGKPL--------------VAARDSKCSAKDAEAGVLAMEALHKQVMPFLLR 1677
E FQ +G+P+ V + K + + E + LH+ + P+LLR
Sbjct: 972 LE-DFQTWFGRPVDKILEKTSNGTSSDVIDENDKTTQRMDEETRNTVSRLHQVLRPYLLR 1030
Query: 1678 RTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKF-SGSQAKQEISSMVKVDESADKGEGNN 1736
R K +V +P K YC LS Q LY+ F S +Q K+ ++S GN
Sbjct: 1031 RLKKDVEKQMPGKYEHIIYCRLSKRQRYLYDDFMSRAQTKETLAS------------GNF 1078
Query: 1737 VSAKASTHVFQALQYLLKLCSHPLL 1761
+S + L L K+C+HP L
Sbjct: 1079 LS------IINCLMQLRKVCNHPDL 1097
>sp|P53115|INO80_YEAST Putative DNA helicase INO80 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=INO80 PE=1 SV=1
Length = 1489
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/337 (33%), Positives = 179/337 (53%), Gaps = 39/337 (11%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
L TL+ YQ +G+NWLA L ++GIL D+MGLGKT+Q+ +++A + E
Sbjct: 702 LACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAH----------LAEN 751
Query: 1502 H----PSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFDKHN----- 1552
H P L++ P++ + +W EI KF+ L Y G+A DR LR+ +D+ N
Sbjct: 752 HNIWGPFLVVTPASTLHNWVNEISKFL--PQFKILPYWGNANDRKVLRKFWDRKNLRYNK 809
Query: 1553 -----VIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILS 1607
V++TSY +V DA+YL ++ W Y ILDE IK+S+S + +RL+L+
Sbjct: 810 NAPFHVMVTSYQMVVTDANYLQKMKWQYMILDEAQAIKSSQSSRWKNLLSFHCRNRLLLT 869
Query: 1608 GTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEAL 1667
GTPIQN++ +LW+L F+MP + +F + K + + ++ + + L
Sbjct: 870 GTPIQNSMQELWALLHFIMPSLFDSHDEFNEWFSKDIESHAEANTKLNQQQ-----LRRL 924
Query: 1668 HKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDE 1727
H + PF+LRR K V S+L +KI D CDL+ Q KLY+ K +IS+ E
Sbjct: 925 HMILKPFMLRRVKKNVQSELGDKIEIDVLCDLTQRQAKLYQVL-----KSQISTNYDAIE 979
Query: 1728 SADKGEGNNVSAKAS---THVFQALQYLLKLCSHPLL 1761
+A + + SA S ++ A+ K+C+HP L
Sbjct: 980 NAATNDSTSNSASNSGSDQNLINAVMQFRKVCNHPDL 1016
>sp|A6ZU34|INO80_YEAS7 Putative DNA helicase INO80 OS=Saccharomyces cerevisiae (strain
YJM789) GN=INO80 PE=3 SV=1
Length = 1495
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/337 (33%), Positives = 179/337 (53%), Gaps = 39/337 (11%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
L TL+ YQ +G+NWLA L ++GIL D+MGLGKT+Q+ +++A + E
Sbjct: 708 LACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAH----------LAEN 757
Query: 1502 H----PSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFDKHN----- 1552
H P L++ P++ + +W EI KF+ L Y G+A DR LR+ +D+ N
Sbjct: 758 HNIWGPFLVVTPASTLHNWVNEISKFL--PQFKILPYWGNANDRKVLRKFWDRKNLRYSK 815
Query: 1553 -----VIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILS 1607
V++TSY +V DA+YL ++ W Y ILDE IK+S+S + +RL+L+
Sbjct: 816 NAPFHVMVTSYQMVVTDANYLQKMKWQYMILDEAQAIKSSQSSRWKNLLSFHCRNRLLLT 875
Query: 1608 GTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEAL 1667
GTPIQN++ +LW+L F+MP + +F + K + + ++ + + L
Sbjct: 876 GTPIQNSMQELWALLHFIMPSLFDSHDEFNEWFSKDIESHAEANTKLNQQQ-----LRRL 930
Query: 1668 HKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDE 1727
H + PF+LRR K V S+L +KI D CDL+ Q KLY+ K +IS+ E
Sbjct: 931 HMILKPFMLRRVKKNVQSELGDKIEIDVLCDLTQRQAKLYQVL-----KSQISTNYDAIE 985
Query: 1728 SADKGEGNNVSAKAS---THVFQALQYLLKLCSHPLL 1761
+A + + SA S ++ A+ K+C+HP L
Sbjct: 986 NAATNDSTSNSASNSGSDQNLINAVMQFRKVCNHPDL 1022
>sp|Q759G7|SWR1_ASHGO Helicase SWR1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=SWR1 PE=3 SV=2
Length = 1486
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 133/363 (36%), Positives = 181/363 (49%), Gaps = 57/363 (15%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
L+ TLR YQ++G+NWLA L +GIL D+MGLGKT+Q A++A E+ E
Sbjct: 667 LRGTLRTYQKQGLNWLASLYNNNTNGILADEMGLGKTIQTIALLAYLACEK------ENW 720
Query: 1502 HPSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALRE---QFDKHNVIITSY 1558
P LII P++++ +W E ++F L Y GS Q R R + D +V ITSY
Sbjct: 721 GPHLIIVPTSVLLNWEMEFKRF--APGFKVLSYYGSPQQRKEKRRGWNKLDAFHVCITSY 778
Query: 1559 DVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPIQNNITDL 1618
+V D + W Y ILDE H IKN KS A+ RL+L+GTP+QNNI +L
Sbjct: 779 QLVVHDQHSFKRKKWQYMILDEAHNIKNFKSTRWQALLNFNTRRRLLLTGTPLQNNIAEL 838
Query: 1619 WSLFDFLMP----------GFLGTERQFQATYGKP---LVAARDSKCSAKDAEAGVLAME 1665
WSL FLMP GF + FQ +GKP ++AA DS+ D E +
Sbjct: 839 WSLLYFLMPQTALENGKISGFADLD-AFQQWFGKPVDKIIAANDSE---HDDETR-RTVS 893
Query: 1666 ALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKF-SGSQAKQEISSMVK 1724
LH+ + P+LLRR K +V +P K YC LS Q LY+ F S +Q K ++S
Sbjct: 894 KLHQVLRPYLLRRLKADVEKQMPAKYEHILYCRLSKRQRFLYDDFMSRAQTKATLAS--- 950
Query: 1725 VDESADKGEGNNVSAKASTHVFQALQYLLKLCSHPLL---------VLGDKSPESLLCHL 1775
GN +S + L L K+C+HP L D+S S HL
Sbjct: 951 ---------GNFMS------IINCLMQLRKVCNHPDLFEVRPILTSFCMDRSVMSNYAHL 995
Query: 1776 SEL 1778
++L
Sbjct: 996 NQL 998
>sp|Q6BGY8|INO80_DEBHA Putative DNA helicase INO80 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=INO80 PE=3 SV=2
Length = 1364
Score = 181 bits (459), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 111/334 (33%), Positives = 178/334 (53%), Gaps = 42/334 (12%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
LK TL+ YQ +G+NWLA L ++GIL D+MGLGKT+Q+ +++A + E
Sbjct: 563 LKCTLKEYQVKGLNWLANLYEQGINGILADEMGLGKTVQSISVLAY----------LAET 612
Query: 1502 H----PSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFDKHN----- 1552
H P L++ P++ + +W EI +F V + Y G+A+DR LR+ +D+ N
Sbjct: 613 HNIWGPFLVVTPASTLHNWQQEISRF--VPEFKVIPYWGNAKDRKVLRKFWDRKNFRYGK 670
Query: 1553 -----VIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILS 1607
V++TSY +V DA Y ++ W Y ILDE IK+S+S ++ +RL+L+
Sbjct: 671 DAPFHVLVTSYQLVVADAAYFQKMKWQYMILDEAQAIKSSQSSRWKSLLSFSCRNRLLLT 730
Query: 1608 GTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEAL 1667
GTPIQN++ +LW+L F+MP + +F + K + + S + E + L
Sbjct: 731 GTPIQNSMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAQS-----NTELNEQQLRRL 785
Query: 1668 HKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDE 1727
H + PF+LRR K V S+L +K+ D +CDL+ Q K Y+ + +IS M +D
Sbjct: 786 HVILKPFMLRRIKKNVQSELGDKLEIDVFCDLTHRQKKYYQMLTS-----QISIMDLLDS 840
Query: 1728 SADKGEGNNVSAKASTHVFQALQYLLKLCSHPLL 1761
+ NN S ++ + + K+C+HP L
Sbjct: 841 A------NNSSDDSAQSLMNLVMQFRKVCNHPDL 868
>sp|O94421|SNF22_SCHPO SWI/SNF chromatin-remodeling complex subunit snf22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf22 PE=1 SV=2
Length = 1680
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 170/320 (53%), Gaps = 26/320 (8%)
Query: 1445 TLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEIHPS 1504
TL+ YQ +G+ W+ L L+GIL D+MGLGKT+Q A + I ++ P
Sbjct: 868 TLKDYQLKGLEWMLSLYNNNLNGILADEMGLGKTIQTIAFITYLIEKKNQQG------PF 921
Query: 1505 LIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQF--DKHNVIITSYDVVR 1562
LII P + + +W E EK+ + + Y G Q R L+ Q NV++T+++ +
Sbjct: 922 LIIVPLSTLTNWIMEFEKW--APSVKKIAYKGPPQLRKTLQSQIRSSNFNVLLTTFEYII 979
Query: 1563 KDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQL-KAAHRLILSGTPIQNNITDLWSL 1621
KD L ++ W + I+DEGH IKN++SK+T + + +RLIL+GTP+QNN+ +LW+L
Sbjct: 980 KDRPLLSRIKWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQYRLILTGTPLQNNLPELWAL 1039
Query: 1622 FDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEALHKQVMPFLLRRTKD 1681
+F++P + + F + P + E +L ++ LHK + PFL RR K
Sbjct: 1040 LNFVLPKIFNSIKSFDEWFNTPFANTGGQDKIGLNEEEALLIIKRLHKVLRPFLFRRLKK 1099
Query: 1682 EVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDESADKGEGNNVSAKA 1741
+V +LP+K+ + C LS +QLKLY+ Q K+ M+ VD GE K
Sbjct: 1100 DVEKELPDKVEKVIKCPLSGLQLKLYQ-----QMKKH--GMLFVD-----GEKGKTGIKG 1147
Query: 1742 STHVFQALQYLLKLCSHPLL 1761
+ L+ K+C+HP +
Sbjct: 1148 LQNTVMQLK---KICNHPFI 1164
>sp|P25439|BRM_DROME ATP-dependent helicase brm OS=Drosophila melanogaster GN=brm PE=1
SV=2
Length = 1638
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 168/320 (52%), Gaps = 24/320 (7%)
Query: 1445 TLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEIHPS 1504
TL+ YQ +G+ WL L L+GIL D+MGLGKT+Q ++V + ++ + P
Sbjct: 772 TLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKKV------MGPY 825
Query: 1505 LIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQF--DKHNVIITSYDVVR 1562
LII P + + +W E EK+ + + Y GS Q R L+ Q K NV++T+Y+ V
Sbjct: 826 LIIVPLSTLPNWVLEFEKW--APAVGVVSYKGSPQGRRLLQNQMRATKFNVLLTTYEYVI 883
Query: 1563 KDADYLGQLLWNYCILDEGHIIKNSKSKIT-VAVKQLKAAHRLILSGTPIQNNITDLWSL 1621
KD L ++ W Y I+DEGH +KN K+T V A +RL+L+GTP+QN + +LW+L
Sbjct: 884 KDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLLTGTPLQNKLPELWAL 943
Query: 1622 FDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEALHKQVMPFLLRRTKD 1681
+FL+P + F+ + P A K + E +L + LHK + PFLLRR K
Sbjct: 944 LNFLLPSIFKSCSTFEQWFNAPF-ATTGEKVELNEEET-ILIIRRLHKVLRPFLLRRLKK 1001
Query: 1682 EVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDESADKGEGNNVSAKA 1741
EV LP+K+ CD+SA+Q LY+ Q+K + + D E
Sbjct: 1002 EVEHQLPDKVEYIIKCDMSALQRVLYKHM---QSKGVLLT--------DGSEKGKHGKGG 1050
Query: 1742 STHVFQALQYLLKLCSHPLL 1761
+ + + L KLC+HP +
Sbjct: 1051 AKALMNTIVQLRKLCNHPFM 1070
>sp|Q5BAZ5|INO80_EMENI Putative DNA helicase ino80 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=ino80 PE=3
SV=1
Length = 1612
Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/354 (33%), Positives = 187/354 (52%), Gaps = 45/354 (12%)
Query: 1440 TELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIE 1499
T L L+ YQ +G+NWL L ++GIL D+MGLGKT+Q+ +++A +
Sbjct: 792 TMLTAKLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAY----------LA 841
Query: 1500 EIH----PSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFD-KH--- 1551
E+H P L+I P++ + +W EI KF V + L Y G+A+DR LR+ +D KH
Sbjct: 842 EVHNIWGPFLVIAPASTLHNWQQEITKF--VPNIKVLPYWGNAKDRKILRKFWDRKHITY 899
Query: 1552 ------NVIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLI 1605
+V++TSY +V DA Y ++ W Y ILDE IK+S+S ++ +RL+
Sbjct: 900 TKESEFHVLVTSYQLVVLDAQYFQKVKWQYMILDEAQAIKSSQSSRWKSLLGFHCRNRLL 959
Query: 1606 LSGTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAME 1665
L+GTPIQNN+ +LW+L F+MP + +F + K + + S + + +
Sbjct: 960 LTGTPIQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQ-----LR 1014
Query: 1666 ALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKV 1725
LH + PF+LRR K V +L +K+ +D +CDL+ Q LY + + +S M +
Sbjct: 1015 RLHMILKPFMLRRVKKHVQQELGDKVEKDVFCDLTYRQRALY-----TNLRNRVSIMDLI 1069
Query: 1726 DESADKGEGNNVSAKASTHVFQALQYLLKLCSHPLLV--LGDKSPESLLCHLSE 1777
+++A E + ST + + K+C+HP L KSP S L H +E
Sbjct: 1070 EKAAVGDETD------STTLMNLVMQFRKVCNHPDLFERAETKSPFS-LAHFAE 1116
>sp|A7TJI3|INO80_VANPO Putative DNA helicase INO80 OS=Vanderwaltozyma polyspora (strain ATCC
22028 / DSM 70294) GN=INO80 PE=3 SV=1
Length = 1556
Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 176/332 (53%), Gaps = 36/332 (10%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
L TL+ YQ +G+NWLA L ++GIL D+MGLGKT+Q+ +++A +AE+
Sbjct: 796 LACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAH-LAEK-----YNIW 849
Query: 1502 HPSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFDKHN--------- 1552
P L++ P++ + +W EI KF V L Y G++ DR LR +D+ N
Sbjct: 850 GPFLVVTPASTLHNWVNEISKF--VPQFKILPYWGNSNDRKILRRFWDRKNLRYNKDSPF 907
Query: 1553 -VIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPI 1611
V+ITSY +V D YL ++ W Y ILDE IK+S+S + +RL+L+GTPI
Sbjct: 908 HVMITSYQMVVSDTSYLQKMKWQYMILDEAQAIKSSQSSRWRNLLSFHCRNRLLLTGTPI 967
Query: 1612 QNNITDLWSLFDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEALHKQV 1671
QNN+ +LW+L F+MP + +F + K + + ++ + + LH +
Sbjct: 968 QNNMQELWALLHFIMPSLFDSHDEFNDWFSKDIESHAEANTKLNQQQ-----LRRLHMIL 1022
Query: 1672 MPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDESA-- 1729
PF+LRR K V S+L +KI D CDL+ Q KLY+ K ++S+ V E+A
Sbjct: 1023 KPFMLRRVKKNVQSELGDKIEIDVMCDLTQRQAKLYQIL-----KSQMSTNYDVIENAAG 1077
Query: 1730 DKGEGNNVSAKASTHVFQALQYLLKLCSHPLL 1761
D G + ++ A+ K+C+HP L
Sbjct: 1078 DDDTG------SDQNMINAVMQFRKVCNHPDL 1103
>sp|Q6CJ38|SWR1_KLULA Helicase SWR1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SWR1 PE=3
SV=1
Length = 1572
Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 118/334 (35%), Positives = 173/334 (51%), Gaps = 41/334 (12%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
L+ TLR YQ++G+NWLA L K +GIL D+MGLGKT+Q +++A E+ E
Sbjct: 761 LRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEK------ENW 814
Query: 1502 HPSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFDK---HNVIITSY 1558
P LI+ P++++ +W E ++F L Y GS Q R R+ ++K +V ITSY
Sbjct: 815 GPHLIVVPTSVLLNWEMEFKRF--APGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSY 872
Query: 1559 DVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPIQNNITDL 1618
+V D + W Y ILDE H IKN +S A+ RL+L+GTP+QNN+ +L
Sbjct: 873 QLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAEL 932
Query: 1619 WSLFDFLMP----------GFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEALH 1668
WSL FLMP GF + FQ +G+P+ ++ + + E + LH
Sbjct: 933 WSLLYFLMPQTALENGKVSGFADLD-AFQQWFGRPVDKIVETGENYEQDEETKKTVSKLH 991
Query: 1669 KQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKF-SGSQAKQEISSMVKVDE 1727
+ + P+LLRR K +V +P K YC LS Q LY+ F S +Q K+ ++S
Sbjct: 992 QVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLAS------ 1045
Query: 1728 SADKGEGNNVSAKASTHVFQALQYLLKLCSHPLL 1761
GN +S + L L K+C+HP L
Sbjct: 1046 ------GNFMS------IINCLMQLRKVCNHPDL 1067
>sp|Q1DUF9|INO80_COCIM Putative DNA helicase INO80 OS=Coccidioides immitis (strain RS)
GN=INO80 PE=3 SV=1
Length = 1662
Score = 178 bits (451), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 186/351 (52%), Gaps = 43/351 (12%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
L L+ YQ +G+NWL L ++GIL D+MGLGKT+Q+ +++A + E+
Sbjct: 792 LTCQLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTVQSISVMAY----------LAEV 841
Query: 1502 H----PSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFDKHN----- 1552
H P L++ PS+ + +W EI KF V + L Y GSA+DR LR+ +D+ N
Sbjct: 842 HDIWGPFLVVAPSSTLHNWQQEIVKF--VPDLKVLPYWGSAKDRKVLRKFWDRRNITYRK 899
Query: 1553 -----VIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILS 1607
V++TSY +V DA Y ++ W Y ILDE IK+S+S ++ + +RL+L+
Sbjct: 900 QSEFHVLVTSYQLVVGDAQYFQKIKWQYMILDEAQAIKSSQSSRWKSLLGMHCRNRLLLT 959
Query: 1608 GTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEAL 1667
GTPIQNN+ +LW+L F+MP + +F + K + + S + + ++ L
Sbjct: 960 GTPIQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQ-----LKRL 1014
Query: 1668 HKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDE 1727
H + PF+LRR K V +L +K+ +D +CDL+ Q Y + + +S M +++
Sbjct: 1015 HMILKPFMLRRIKKHVQKELGDKVEKDVFCDLTYRQRAYY-----TSLRNRVSIMDLIEK 1069
Query: 1728 SADKGEGNNVSAKASTHVFQALQYLLKLCSHP-LLVLGDKSPESLLCHLSE 1777
+A G++ ST + + K+C+HP L + + +C+ +E
Sbjct: 1070 AAI---GDDTD---STTLMNLVMQFRKVCNHPDLFERAETTSPFSVCYFAE 1114
>sp|Q4IAK7|SWR1_GIBZE Helicase SWR1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC
9075 / NRRL 31084) GN=SWR1 PE=3 SV=1
Length = 1691
Score = 177 bits (450), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 174/331 (52%), Gaps = 36/331 (10%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
L+ TLR YQ++G++WLA L +GIL D+MGLGKT+Q A++A + + E
Sbjct: 807 LRGTLREYQRDGLDWLAGLYANSTNGILADEMGLGKTIQTIALLA------HLACTHEVW 860
Query: 1502 HPSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQF---DKHNVIITSY 1558
P L+I P++++ +W E +K+ L Y GS ++R R+ + D NV ITSY
Sbjct: 861 GPHLVIVPTSVMLNWEMEFKKW--CPGFKILAYYGSQEERKRKRQGWNNDDIWNVCITSY 918
Query: 1559 DVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPIQNNITDL 1618
+V +D + W+Y ILDE H IKN KS+ + RL+L+GTP+QNN+T+L
Sbjct: 919 QLVLQDQQVFKRRRWHYMILDEAHNIKNFKSQRWQTLLGFNTQARLLLTGTPLQNNLTEL 978
Query: 1619 WSLFDFLMP-----GFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEALHKQVMP 1673
WSL FLMP G ++F + KP +S D EA + + LHK + P
Sbjct: 979 WSLLFFLMPAENGVGGFADLQEFHDWFAKPESQILESGREQMDDEARAI-ISKLHKVLRP 1037
Query: 1674 FLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKF-SGSQAKQEISSMVKVDESADKG 1732
+LLRR K +V +P K +C LS Q +LY+ F S + K+ ++S
Sbjct: 1038 YLLRRLKADVEKQMPAKYEHVEFCRLSKRQRELYDGFLSRTDTKETLNS----------- 1086
Query: 1733 EGNNVSAKASTHVFQALQYLLKLCSHPLLVL 1763
GN +S + L L K+C+HP L +
Sbjct: 1087 -GNYLS------IINCLMQLRKVCNHPDLFV 1110
>sp|A7Z019|SMCA4_BOVIN Transcription activator BRG1 OS=Bos taurus GN=SMARCA4 PE=2 SV=1
Length = 1606
Score = 177 bits (449), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 168/319 (52%), Gaps = 24/319 (7%)
Query: 1446 LRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEIHPSL 1505
L++YQ +G+ WL L L+GIL D+MGLGKT+Q A++ + +R + P L
Sbjct: 746 LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRING------PFL 799
Query: 1506 IICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQF--DKHNVIITSYDVVRK 1563
II P + + +WA+E +K+ + + Y GS R A Q K NV++T+Y+ + K
Sbjct: 800 IIVPLSTLSNWAYEFDKW--APSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIK 857
Query: 1564 DADYLGQLLWNYCILDEGHIIKNSKSKIT-VAVKQLKAAHRLILSGTPIQNNITDLWSLF 1622
D L ++ W Y I+DEGH +KN K+T V A RL+L+GTP+QN + +LW+L
Sbjct: 858 DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALL 917
Query: 1623 DFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEALHKQVMPFLLRRTKDE 1682
+FL+P + F+ + P A K + E +L + LHK + PFLLRR K E
Sbjct: 918 NFLLPTIFKSCSTFEQWFNAPF-AMTGEKVDLNEEET-ILIIRRLHKVLRPFLLRRLKKE 975
Query: 1683 VLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDESADKGEGNNVSAKAS 1742
V + LPEK+ CD+SA+Q LY QAK + + D E + +
Sbjct: 976 VEAQLPEKVEYVIKCDMSALQRVLYRHM---QAKGVLLT--------DGSEKDKKGKGGT 1024
Query: 1743 THVFQALQYLLKLCSHPLL 1761
+ + L K+C+HP +
Sbjct: 1025 KTLMNTIMQLRKICNHPYM 1043
>sp|Q8K1P7|SMCA4_RAT Transcription activator BRG1 OS=Rattus norvegicus GN=Smarca4 PE=1
SV=1
Length = 1613
Score = 177 bits (449), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 168/319 (52%), Gaps = 24/319 (7%)
Query: 1446 LRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEIHPSL 1505
L++YQ +G+ WL L L+GIL D+MGLGKT+Q A++ + +R + P L
Sbjct: 754 LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRING------PFL 807
Query: 1506 IICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQF--DKHNVIITSYDVVRK 1563
II P + + +WA+E +K+ + + Y GS R A Q K NV++T+Y+ + K
Sbjct: 808 IIVPLSTLSNWAYEFDKW--APSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIK 865
Query: 1564 DADYLGQLLWNYCILDEGHIIKNSKSKIT-VAVKQLKAAHRLILSGTPIQNNITDLWSLF 1622
D L ++ W Y I+DEGH +KN K+T V A RL+L+GTP+QN + +LW+L
Sbjct: 866 DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALL 925
Query: 1623 DFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEALHKQVMPFLLRRTKDE 1682
+FL+P + F+ + P A K + E +L + LHK + PFLLRR K E
Sbjct: 926 NFLLPTIFKSCSTFEQWFNAPF-AMTGEKVDLNEEET-ILIIRRLHKVLRPFLLRRLKKE 983
Query: 1683 VLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDESADKGEGNNVSAKAS 1742
V + LPEK+ CD+SA+Q LY QAK + + D E + +
Sbjct: 984 VEAQLPEKVEYVIKCDMSALQRVLYRHM---QAKGVLLT--------DGSEKDKKGKGGT 1032
Query: 1743 THVFQALQYLLKLCSHPLL 1761
+ + L K+C+HP +
Sbjct: 1033 KTLMNTIMQLRKICNHPYM 1051
>sp|Q6CNY4|INO80_KLULA Putative DNA helicase INO80 OS=Kluyveromyces lactis (strain ATCC 8585
/ CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=INO80 PE=3 SV=1
Length = 1489
Score = 177 bits (449), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 173/330 (52%), Gaps = 32/330 (9%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
L TL+ YQ +G+NWLA L ++GIL D+MGLGKT+Q+ +++A +A+R
Sbjct: 742 LACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAH-LADR-----YNIW 795
Query: 1502 HPSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFD-KH--------- 1551
P +++ P++ + +W EI +F V L Y G+A DR LR+ +D KH
Sbjct: 796 GPFIVVTPASTLHNWVNEISRF--VPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPF 853
Query: 1552 NVIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPI 1611
+V++TSY +V DA YL ++ W Y ILDE IK+S+S + +RL+L+GTPI
Sbjct: 854 HVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPI 913
Query: 1612 QNNITDLWSLFDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEALHKQV 1671
QNN+ +LW+L F+MP + +F + K + + +S + E + LH +
Sbjct: 914 QNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAES-----NTELNQEQLRRLHMVL 968
Query: 1672 MPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDESADK 1731
PF+LRR K V S+L +KI D CDL+ Q KLY Q + S V A +
Sbjct: 969 KPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLY---------QVLKSQVSGGYDAIE 1019
Query: 1732 GEGNNVSAKASTHVFQALQYLLKLCSHPLL 1761
N + + + K+C+HP L
Sbjct: 1020 NAAGNDDVTSDQKLVNLVMEFRKVCNHPDL 1049
>sp|Q3TKT4|SMCA4_MOUSE Transcription activator BRG1 OS=Mus musculus GN=Smarca4 PE=1 SV=1
Length = 1613
Score = 177 bits (448), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 168/319 (52%), Gaps = 24/319 (7%)
Query: 1446 LRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEIHPSL 1505
L++YQ +G+ WL L L+GIL D+MGLGKT+Q A++ + +R + P L
Sbjct: 754 LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRING------PFL 807
Query: 1506 IICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQF--DKHNVIITSYDVVRK 1563
II P + + +WA+E +K+ + + Y GS R A Q K NV++T+Y+ + K
Sbjct: 808 IIVPLSTLSNWAYEFDKW--APSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIK 865
Query: 1564 DADYLGQLLWNYCILDEGHIIKNSKSKIT-VAVKQLKAAHRLILSGTPIQNNITDLWSLF 1622
D L ++ W Y I+DEGH +KN K+T V A RL+L+GTP+QN + +LW+L
Sbjct: 866 DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALL 925
Query: 1623 DFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEALHKQVMPFLLRRTKDE 1682
+FL+P + F+ + P A K + E +L + LHK + PFLLRR K E
Sbjct: 926 NFLLPTIFKSCSTFEQWFNAPF-AMTGEKVDLNEEET-ILIIRRLHKVLRPFLLRRLKKE 983
Query: 1683 VLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDESADKGEGNNVSAKAS 1742
V + LPEK+ CD+SA+Q LY QAK + + D E + +
Sbjct: 984 VEAQLPEKVEYVIKCDMSALQRVLYRHM---QAKGVLLT--------DGSEKDKKGKGGT 1032
Query: 1743 THVFQALQYLLKLCSHPLL 1761
+ + L K+C+HP +
Sbjct: 1033 KTLMNTIMQLRKICNHPYM 1051
>sp|Q2UTQ9|INO80_ASPOR Putative DNA helicase ino80 OS=Aspergillus oryzae (strain ATCC 42149
/ RIB 40) GN=ino80 PE=3 SV=1
Length = 1444
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/354 (33%), Positives = 186/354 (52%), Gaps = 45/354 (12%)
Query: 1440 TELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIE 1499
T L L+ YQ +G+NWL L ++GIL D+MGLGKT+Q+ +++A +
Sbjct: 627 TMLTAKLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAY----------LA 676
Query: 1500 EIH----PSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFD-KH--- 1551
E+H P L+I P++ + +W EI KF V + L Y GSA+DR LR+ +D KH
Sbjct: 677 EVHNIWGPFLVIAPASTLHNWQQEITKF--VPDIKVLPYWGSAKDRKILRKFWDRKHITY 734
Query: 1552 ------NVIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLI 1605
+V++TSY +V DA Y ++ W Y ILDE IK+S+S + +RL+
Sbjct: 735 TKESEFHVLVTSYQLVVLDAQYFQKVKWQYMILDEAQAIKSSQSSRWKNLLGFSCRNRLL 794
Query: 1606 LSGTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAME 1665
L+GTPIQNN+ +LW+L F+MP + +F + K + + S + + ++
Sbjct: 795 LTGTPIQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQ-----LK 849
Query: 1666 ALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKV 1725
LH + PF+LRR K V +L +K+ +D +CDL+ Q Y + + +S M +
Sbjct: 850 RLHMILKPFMLRRVKKHVQQELGDKVEKDVFCDLTYRQRAYY-----TNLRNRVSIMDLI 904
Query: 1726 DESADKGEGNNVSAKASTHVFQALQYLLKLCSHPLLV--LGDKSPESLLCHLSE 1777
+++A E + ST + + K+C+HP L KSP S + H +E
Sbjct: 905 EKAAVGDEAD------STTLMNLVMQFRKVCNHPDLFERAETKSPFS-VAHFAE 951
>sp|P94593|YWQA_BACSU Uncharacterized ATP-dependent helicase YwqA OS=Bacillus subtilis
(strain 168) GN=ywqA PE=3 SV=2
Length = 922
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 174/351 (49%), Gaps = 37/351 (10%)
Query: 1424 LEQLLDNSHIDDYKLGTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASA 1483
+ +L ++ ++K+ K TLR YQ+ G+NWL FL+ L DDMGLGKT+Q A
Sbjct: 428 IRKLTAAENLPEHKVSPSFKGTLRPYQKYGMNWLLFLRESGFGACLADDMGLGKTIQMIA 487
Query: 1484 IVASDIAERRASNSIEEIHPSLIICPSTLVGHWAFEIEKFI-DVSLMSTLQYVGSAQDRI 1542
S + P LII P++++G+W E++ F D+S+ L Y
Sbjct: 488 YFL------HVKESGRQKTPHLIIAPTSVLGNWQRELQTFAPDLSV--ALHYGPRRPKGD 539
Query: 1543 ALREQFDKHNVIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAH 1602
++ +V++TSY + D + L + WN LDE IKN+ +K + A+++LK H
Sbjct: 540 DFAAHYENADVVLTSYGLSHADTEELSSVTWNTICLDEAQNIKNAHTKQSRAIRKLKGLH 599
Query: 1603 RLILSGTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVL 1662
+ LSGTP++N +T+LWS+FDF+ G+LG+ F Y P+ RD K +
Sbjct: 600 HIALSGTPMENRLTELWSIFDFMNKGYLGSLTGFHKRYVLPIEKDRDEKRIGQ------- 652
Query: 1663 AMEALHKQVMPFLLRRTK--DEVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEIS 1720
L + + PFLLRRTK +EV +LPEK+ + + LSA Q LYE+ K
Sbjct: 653 ----LQQLIRPFLLRRTKRDEEVALNLPEKLEEKEFIPLSAEQASLYEQL----VKDTFD 704
Query: 1721 SMVKVDESADKGEGNNVSAKASTHVFQALQYLLKLCSHPLLVLGDKSPESL 1771
M + + + L L ++C HP L L ++ E L
Sbjct: 705 HMTSL-----------TGMQRKALILSMLGRLKQICDHPALYLKEEQTELL 744
>sp|P51532|SMCA4_HUMAN Transcription activator BRG1 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2
Length = 1647
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 168/319 (52%), Gaps = 24/319 (7%)
Query: 1446 LRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEIHPSL 1505
L++YQ +G+ WL L L+GIL D+MGLGKT+Q A++ + +R + P L
Sbjct: 754 LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRING------PFL 807
Query: 1506 IICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQF--DKHNVIITSYDVVRK 1563
II P + + +WA+E +K+ + + Y GS R A Q K NV++T+Y+ + K
Sbjct: 808 IIVPLSTLSNWAYEFDKW--APSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIK 865
Query: 1564 DADYLGQLLWNYCILDEGHIIKNSKSKIT-VAVKQLKAAHRLILSGTPIQNNITDLWSLF 1622
D L ++ W Y I+DEGH +KN K+T V A RL+L+GTP+QN + +LW+L
Sbjct: 866 DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALL 925
Query: 1623 DFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEALHKQVMPFLLRRTKDE 1682
+FL+P + F+ + P A K + E +L + LHK + PFLLRR K E
Sbjct: 926 NFLLPTIFKSCSTFEQWFNAPF-AMTGEKVDLNEEET-ILIIRRLHKVLRPFLLRRLKKE 983
Query: 1683 VLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDESADKGEGNNVSAKAS 1742
V + LPEK+ CD+SA+Q LY QAK + + D E + +
Sbjct: 984 VEAQLPEKVEYVIKCDMSALQRVLYRHM---QAKGVLLT--------DGSEKDKKGKGGT 1032
Query: 1743 THVFQALQYLLKLCSHPLL 1761
+ + L K+C+HP +
Sbjct: 1033 KTLMNTIMQLRKICNHPYM 1051
>sp|P31380|FUN30_YEAST ATP-dependent helicase FUN30 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=FUN30 PE=1 SV=1
Length = 1131
Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 159/278 (57%), Gaps = 25/278 (8%)
Query: 1443 KVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEIH 1502
+++L+ YQQ GINWL L + K+ IL DDMGLGKT Q + A I E
Sbjct: 569 EISLKDYQQTGINWLNLLYQNKMSCILADDMGLGKTCQVISFFA-------YLKQINEPG 621
Query: 1503 PSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFD----KHNVIITSY 1558
P L++ PS+ + +W E +KF + Y GS Q+R LR+ + K++VI+T+Y
Sbjct: 622 PHLVVVPSSTLENWLREFQKF--APALKIEPYYGSLQEREELRDILERNAGKYDVIVTTY 679
Query: 1559 DVV---RKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPIQNNI 1615
++ + D +L +N + DEGH++KNS S+ + +++A RL+L+GTP+QNN+
Sbjct: 680 NLAAGNKYDVSFLKNRNFNVVVYDEGHMLKNSTSERFAKLMKIRANFRLLLTGTPLQNNL 739
Query: 1616 TDLWSLFDFLMPG-FLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEALHK---QV 1671
+L SL +F+MP F+ + F A + + D+K +LA EA+ + +
Sbjct: 740 KELMSLLEFIMPNLFISKKESFDAIFKQRAKTTDDNKN-----HNPLLAQEAITRAKTMM 794
Query: 1672 MPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEK 1709
PF+LRR KD+VL LP K +YC+L+A+Q K+Y+K
Sbjct: 795 KPFILRRRKDQVLKHLPPKHTHIQYCELNAIQKKIYDK 832
>sp|Q59U81|SWR1_CANAL Helicase SWR1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=SWR1 PE=3 SV=1
Length = 1641
Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/381 (32%), Positives = 190/381 (49%), Gaps = 55/381 (14%)
Query: 1408 TGLTEGLSRNAEDAQFLEQLLDNSHIDDYKLGTELKVTLRRYQQEGINWLAFLKRFKLHG 1467
G + ++ ED +E +++ S + D + + L+ TLR YQ++G+NWLA L +G
Sbjct: 786 NGKIDKIASTDEDDSNVE-IVNGSKVKDVPIPSLLRGTLRPYQKQGLNWLASLYNNNTNG 844
Query: 1468 ILCDDMGLGKTLQASAIVASDIAERRASNSIEEIHPSLIICPSTLVGHWAFEIEKFIDVS 1527
IL D+MGLGKT+Q +++A E + P LII P++++ +W E +KF
Sbjct: 845 ILADEMGLGKTIQTISLLAYLACEHH------KWGPHLIIVPTSVMLNWEMEFKKF--AP 896
Query: 1528 LMSTLQYVGSAQDRIALREQFDK---HNVIITSYDVVRKDADYLGQLLWNYCILDEGHII 1584
L Y GS Q R R+ ++K +V ITSY +V +D + W Y ILDE H I
Sbjct: 897 GFKVLTYYGSPQQRAQKRKGWNKPDAFHVCITSYQLVVQDQQSFKRRRWTYMILDEAHNI 956
Query: 1585 KNSKSKITVAVKQLKAAHRLILSGTPIQNNITDLWSLFDFLMP----------GFLGTER 1634
KN +S A+ +RL+L+GTP+QNN+ +LWSL FLMP GF +
Sbjct: 957 KNFRSTRWRALLNFNTENRLLLTGTPLQNNLMELWSLLYFLMPSSKVNQAMPEGFANLD- 1015
Query: 1635 QFQATYGKPL-------------VAARDSKCSAKDAEAGVLAMEALHKQVMPFLLRRTKD 1681
FQ +GKP+ + + + + K E + LH+ + P+LLRR K
Sbjct: 1016 DFQQWFGKPVNRILEQTSAGNSDLIDENERTTQKMDEETRNTVARLHQVLRPYLLRRLKK 1075
Query: 1682 EVLSDLPEKIIQDRYCDLSAVQLKLYEKF-SGSQAKQEISSMVKVDESADKGEGNNVSAK 1740
+V +P K YC LS Q LY+ F S ++ K+ ++S GN +S
Sbjct: 1076 DVEKQMPGKYEHIVYCRLSKRQRFLYDDFMSRAKTKETLAS------------GNFLS-- 1121
Query: 1741 ASTHVFQALQYLLKLCSHPLL 1761
+ L L K+C+HP L
Sbjct: 1122 ----IINCLMQLRKVCNHPDL 1138
>sp|P47264|Y018_MYCGE Uncharacterized ATP-dependent helicase MG018 OS=Mycoplasma genitalium
(strain ATCC 33530 / G-37 / NCTC 10195) GN=MG018 PE=3
SV=3
Length = 1031
Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 160/282 (56%), Gaps = 34/282 (12%)
Query: 1428 LDNSHIDDYKLGTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVAS 1487
LDN+ I++ LR+YQ+EG+ W+ L+ + GIL D+MGLGKT Q
Sbjct: 570 LDNNQINN----------LRKYQKEGVKWIRALEDNQFGGILADEMGLGKTAQVI----- 614
Query: 1488 DIAERRASNSIEEIHPSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQ 1547
A + S + + PSLII P++L+ +W E +KF + T G+ ++R + E
Sbjct: 615 -FAMLDSYQSTKSLLPSLIIVPASLLLNWKSEFQKFAPHVKIVTAN--GNFKERSQVYES 671
Query: 1548 FDKHNVIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILS 1607
K+ +++ S++V+R D ++ Q ++Y ++DE IKN S +T A K++K L L+
Sbjct: 672 L-KNQILLMSFNVLRSDIKWISQKKFHYVVIDEAQGIKNENSTVTKAAKKIKGNFCLALT 730
Query: 1608 GTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEAL 1667
GTPI+N + DLWS FDF++P FLG ++QF + K E + + L
Sbjct: 731 GTPIENRLLDLWSCFDFVLPNFLGNKKQFSDQFEK---------------EKNDESFQKL 775
Query: 1668 HKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEK 1709
K+ PF+LRRTK++VL +LP+KII D Y +LS KLY+K
Sbjct: 776 MKKTSPFILRRTKNKVLKELPKKIITDIYVELSEEHQKLYDK 817
>sp|A1C9W6|INO80_ASPCL Putative DNA helicase ino80 OS=Aspergillus clavatus (strain ATCC 1007
/ CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=ino80
PE=3 SV=1
Length = 1707
Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/352 (32%), Positives = 184/352 (52%), Gaps = 45/352 (12%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
L L+ YQ +G+NWL L ++GIL D+MGLGKT+Q+ +++A + E+
Sbjct: 831 LTAKLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAY----------LAEV 880
Query: 1502 H----PSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFD-KH----- 1551
H P L+I P++ + +W EI KF V + L Y GSA+DR LR+ +D KH
Sbjct: 881 HNIWGPFLVIAPASTLHNWQQEITKF--VPDIKVLPYWGSAKDRKVLRKFWDRKHITYTK 938
Query: 1552 ----NVIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILS 1607
+V++TSY +V D+ Y ++ W Y ILDE IK+S+S + +RL+L+
Sbjct: 939 ESEFHVLVTSYQLVVLDSQYFQKVKWQYMILDEAQAIKSSQSSRWKNLLGFSCRNRLLLT 998
Query: 1608 GTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEAL 1667
GTPIQNN+ +LW+L F+MP + +F + K + + S + + + L
Sbjct: 999 GTPIQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQ-----LRRL 1053
Query: 1668 HKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDE 1727
H + PF+LRR K V +L +K+ +D +CDL+ Q Y + + +S M +++
Sbjct: 1054 HMILKPFMLRRVKKHVQQELGDKVEKDVFCDLTYRQRAYY-----TNLRNRVSIMDLIEK 1108
Query: 1728 SADKGEGNNVSAKASTHVFQALQYLLKLCSHPLLV--LGDKSPESLLCHLSE 1777
+A E + ST + + K+C+HP L KSP S L H +E
Sbjct: 1109 AAVGDEAD------STTLMNLVMQFRKVCNHPDLFERAETKSPFS-LAHFAE 1153
>sp|Q74Z27|INO80_ASHGO Putative DNA helicase INO80 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=INO80 PE=3 SV=2
Length = 1414
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/333 (33%), Positives = 175/333 (52%), Gaps = 31/333 (9%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
L TL+ YQ +G+NWLA L ++GIL D+MGLGKT+Q+ +++A +AER
Sbjct: 651 LACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAH-LAER-----YNIW 704
Query: 1502 HPSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFD-KH--------- 1551
P +++ P++ + +W EI+KF V L Y G+ DR LR +D KH
Sbjct: 705 GPFIVVTPASTLHNWVNEIQKF--VPDFKILPYWGNGNDRKILRRFWDRKHLRYSKDAPF 762
Query: 1552 NVIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPI 1611
+V+ITSY ++ DA YL ++ W Y ILDE IK+S+S + +RL+L+GTPI
Sbjct: 763 HVMITSYQMIVSDAAYLQKMKWQYMILDEAQAIKSSQSSRWKNLLSFHCRNRLLLTGTPI 822
Query: 1612 QNNITDLWSLFDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEALHKQV 1671
QN++ +LW+L F+MP + +F + K + + S + + LH +
Sbjct: 823 QNSMQELWALLHFIMPSLFDSHDEFNDWFSKDIESHAQSNTQLNQQQ-----LRRLHMIL 877
Query: 1672 MPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDESADK 1731
PF+LRR K V S+L +KI D CDL+ Q KLY+ K ++S+ E+A
Sbjct: 878 KPFMLRRIKKNVQSELGDKIEIDVMCDLTHRQAKLYQVL-----KSQVSASYDAIENAAS 932
Query: 1732 GEGNNVSAKAS---THVFQALQYLLKLCSHPLL 1761
+ S S + + + K+C+HP L
Sbjct: 933 NSSGDDSGNMSLSDSKIMNTVMEFRKVCNHPDL 965
>sp|Q6DIC0|SMCA2_MOUSE Probable global transcription activator SNF2L2 OS=Mus musculus
GN=Smarca2 PE=1 SV=1
Length = 1577
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/354 (33%), Positives = 183/354 (51%), Gaps = 32/354 (9%)
Query: 1445 TLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEIHPS 1504
TL+ YQ +G+ W+ L L+GIL D+MGLGKT+Q A++ + +R + P
Sbjct: 728 TLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNG------PY 781
Query: 1505 LIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQF--DKHNVIITSYDVVR 1562
LII P + + +W +E +K+ + + Y G+ R +L Q K NV++T+Y+ +
Sbjct: 782 LIIVPLSTLSNWTYEFDKW--APSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYII 839
Query: 1563 KDADYLGQLLWNYCILDEGHIIKNSKSKIT-VAVKQLKAAHRLILSGTPIQNNITDLWSL 1621
KD L ++ W Y I+DEGH +KN K+T V A R++L+GTP+QN + +LW+L
Sbjct: 840 KDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWAL 899
Query: 1622 FDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEALHKQVMPFLLRRTKD 1681
+FL+P + F+ + P A + + E +L + LHK + PFLLRR K
Sbjct: 900 LNFLLPTIFKSCSTFEQWFNAPF--AMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKK 957
Query: 1682 EVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDESADKGEGNNVSAKA 1741
EV S LPEK+ CD+SA+Q LY QAK + + D E +
Sbjct: 958 EVESQLPEKVEYVIKCDMSALQKILYRHM---QAKGILLT--------DGSEKDKKGKGG 1006
Query: 1742 STHVFQALQYLLKLCSHPLLVLGDKSPESLLCHLSELFPGSSDII--SELHKAS 1793
+ + + L K+C+HP + ES HL S+ +I +EL++AS
Sbjct: 1007 AKTLMNTIMQLRKICNHPYMF--QHIEESFAEHLGY----SNGVINGAELYRAS 1054
>sp|P51531|SMCA2_HUMAN Probable global transcription activator SNF2L2 OS=Homo sapiens
GN=SMARCA2 PE=1 SV=2
Length = 1590
Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/354 (33%), Positives = 183/354 (51%), Gaps = 32/354 (9%)
Query: 1445 TLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEIHPS 1504
TL+ YQ +G+ W+ L L+GIL D+MGLGKT+Q A++ + +R + P
Sbjct: 723 TLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNG------PY 776
Query: 1505 LIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQF--DKHNVIITSYDVVR 1562
LII P + + +W +E +K+ + + Y G+ R +L Q K NV++T+Y+ +
Sbjct: 777 LIIVPLSTLSNWTYEFDKW--APSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYII 834
Query: 1563 KDADYLGQLLWNYCILDEGHIIKNSKSKIT-VAVKQLKAAHRLILSGTPIQNNITDLWSL 1621
KD L ++ W Y I+DEGH +KN K+T V A R++L+GTP+QN + +LW+L
Sbjct: 835 KDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWAL 894
Query: 1622 FDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEALHKQVMPFLLRRTKD 1681
+FL+P + F+ + P A + + E +L + LHK + PFLLRR K
Sbjct: 895 LNFLLPTIFKSCSTFEQWFNAPF--AMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKK 952
Query: 1682 EVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDESADKGEGNNVSAKA 1741
EV S LPEK+ CD+SA+Q LY QAK + + D E +
Sbjct: 953 EVESQLPEKVEYVIKCDMSALQKILYRHM---QAKGILLT--------DGSEKDKKGKGG 1001
Query: 1742 STHVFQALQYLLKLCSHPLLVLGDKSPESLLCHLSELFPGSSDII--SELHKAS 1793
+ + + L K+C+HP + ES HL S+ +I +EL++AS
Sbjct: 1002 AKTLMNTIMQLRKICNHPYMF--QHIEESFAEHLGY----SNGVINGAELYRAS 1049
>sp|Q0UG82|INO80_PHANO Putative DNA helicase INO80 OS=Phaeosphaeria nodorum (strain SN15 /
ATCC MYA-4574 / FGSC 10173) GN=INO80 PE=3 SV=2
Length = 1673
Score = 174 bits (441), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 111/330 (33%), Positives = 177/330 (53%), Gaps = 35/330 (10%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
L TL+ YQ +G+NWL L ++GIL D+MGLGKT+Q+ +++A +AER
Sbjct: 817 LNCTLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTVQSISVMAY-LAER-----YNIW 870
Query: 1502 HPSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFD-KH--------- 1551
P L+I P++ + +W EI KF V ++ + Y G+A+DR LR+ +D KH
Sbjct: 871 GPFLVIAPASTLHNWQQEIAKF--VPDLNVIPYWGTAKDRKVLRKLWDRKHVTYTRDSPF 928
Query: 1552 NVIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPI 1611
+V+++SY +V +DA Y ++ W Y ILDE IK+S S ++ + +RL+L+GTPI
Sbjct: 929 HVVVSSYQLVVQDAQYFQKMRWQYMILDEAQAIKSSNSSRWKSLLNFHSRNRLLLTGTPI 988
Query: 1612 QNNITDLWSLFDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEALHKQV 1671
QNN+ +LW+L F+MP + +F + K + + S + + + LH +
Sbjct: 989 QNNMQELWALLHFIMPSLFDSHDEFSEWFSKDIESHAQSNTKLNEDQ-----LRRLHMIL 1043
Query: 1672 MPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDESADK 1731
PF+LRR K V +L +KI D YCDL+ Q Y + +IS M + +K
Sbjct: 1044 KPFMLRRVKKHVQKELGDKIELDVYCDLTYRQRAYYANL-----RNKISIMDLI----EK 1094
Query: 1732 GEGNNVSAKASTHVFQALQYLLKLCSHPLL 1761
G+ + S + + K+C+HP L
Sbjct: 1095 AVGDE---QDSATLMNLVMQFRKVCNHPDL 1121
>sp|Q0CA78|INO80_ASPTN Putative DNA helicase ino80 OS=Aspergillus terreus (strain NIH 2624 /
FGSC A1156) GN=ino80 PE=3 SV=1
Length = 1690
Score = 174 bits (441), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 110/334 (32%), Positives = 176/334 (52%), Gaps = 42/334 (12%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
L L+ YQ +G+NWL L ++GIL D+MGLGKT+Q+ +++A + E+
Sbjct: 814 LTAKLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAY----------LAEV 863
Query: 1502 H----PSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFD-KH----- 1551
H P L+I P++ + +W EI KF V + L Y GSA+DR LR+ +D KH
Sbjct: 864 HNIWGPFLVIAPASTLHNWQQEITKF--VPDIKVLPYWGSAKDRKILRKFWDRKHITYTK 921
Query: 1552 ----NVIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILS 1607
+V++TSY +V DA Y ++ W Y ILDE IK+S+S + +RL+L+
Sbjct: 922 ESEFHVLVTSYQLVVLDAQYFQKVKWQYMILDEAQAIKSSQSSRWKNLLGFHCRNRLLLT 981
Query: 1608 GTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEAL 1667
GTPIQNN+ +LW+L F+MP + +F + K + + S + + ++ L
Sbjct: 982 GTPIQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQ-----LKRL 1036
Query: 1668 HKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDE 1727
H + PF+LRR K V +L +K+ +D +CDL+ Q Y + +S M +++
Sbjct: 1037 HMILKPFMLRRVKKHVQQELGDKVEKDVFCDLTYRQRAYYTGL-----RDRVSIMDLIEK 1091
Query: 1728 SADKGEGNNVSAKASTHVFQALQYLLKLCSHPLL 1761
+A E + ST + + K+C+HP L
Sbjct: 1092 AAVGDEAD------STTLMNLVMQFRKVCNHPDL 1119
>sp|A2R9H9|INO80_ASPNC Putative DNA helicase ino80 OS=Aspergillus niger (strain CBS 513.88 /
FGSC A1513) GN=ino80 PE=3 SV=1
Length = 1697
Score = 174 bits (441), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 110/334 (32%), Positives = 176/334 (52%), Gaps = 42/334 (12%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
L L+ YQ +G+NWL L ++GIL D+MGLGKT+Q+ +++A + E+
Sbjct: 819 LTAKLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAY----------LAEV 868
Query: 1502 H----PSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFD-KH----- 1551
H P L+I P++ + +W EI KF V + L Y GSA+DR LR+ +D KH
Sbjct: 869 HNIWGPFLVIAPASTLHNWQQEITKF--VPDIKVLPYWGSAKDRKILRKFWDRKHITYTK 926
Query: 1552 ----NVIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILS 1607
+V++TSY +V DA Y ++ W Y ILDE IK+S+S + +RL+L+
Sbjct: 927 ESEFHVLVTSYQLVVLDAQYFQKVKWQYMILDEAQAIKSSQSSRWKNLLGFHCRNRLLLT 986
Query: 1608 GTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEAL 1667
GTPIQNN+ +LW+L F+MP + +F + K + + S + + + L
Sbjct: 987 GTPIQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQ-----LRRL 1041
Query: 1668 HKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDE 1727
H + PF+LRR K V +L +K+ +D +CDL+ Q Y + + +S M +++
Sbjct: 1042 HMILKPFMLRRVKKHVQQELGDKVEKDIFCDLTYRQRAYY-----TNLRNRVSIMDLIEK 1096
Query: 1728 SADKGEGNNVSAKASTHVFQALQYLLKLCSHPLL 1761
+A E + ST + + K+C+HP L
Sbjct: 1097 AAVGDEAD------STTLMNLVMQFRKVCNHPDL 1124
>sp|Q4WTV7|INO80_ASPFU Putative DNA helicase ino80 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=ino80 PE=3
SV=1
Length = 1708
Score = 174 bits (440), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 109/334 (32%), Positives = 176/334 (52%), Gaps = 42/334 (12%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
L L+ YQ +G+NWL L ++GIL D+MGLGKT+Q+ +++A + E+
Sbjct: 829 LTAKLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAY----------LAEV 878
Query: 1502 H----PSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFD-KH----- 1551
H P L+I P++ + +W EI KF V + L Y GSA+DR LR+ +D KH
Sbjct: 879 HNIWGPFLVIAPASTLHNWQQEITKF--VPDIKVLPYWGSAKDRKVLRKFWDRKHITYTK 936
Query: 1552 ----NVIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILS 1607
+V++TSY +V D+ Y ++ W Y ILDE IK+S+S + +RL+L+
Sbjct: 937 ESEFHVLVTSYQLVVLDSQYFQKVKWQYMILDEAQAIKSSQSSRWKNLLGFHCRNRLLLT 996
Query: 1608 GTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEAL 1667
GTPIQNN+ +LW+L F+MP + +F + K + + S + + + L
Sbjct: 997 GTPIQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQ-----LRRL 1051
Query: 1668 HKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDE 1727
H + PF+LRR K V +L +K+ +D +CDL+ Q Y + + +S M +++
Sbjct: 1052 HMILKPFMLRRVKKHVQQELGDKVEKDVFCDLTYRQRAYY-----TNLRNRVSIMDLIEK 1106
Query: 1728 SADKGEGNNVSAKASTHVFQALQYLLKLCSHPLL 1761
+A E + ST + + K+C+HP L
Sbjct: 1107 AAVGDEAD------STTLMNLVMQFRKVCNHPDL 1134
>sp|A7EQA8|INO80_SCLS1 Putative DNA helicase INO80 OS=Sclerotinia sclerotiorum (strain ATCC
18683 / 1980 / Ss-1) GN=INO80 PE=3 SV=1
Length = 1707
Score = 174 bits (440), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 110/330 (33%), Positives = 176/330 (53%), Gaps = 34/330 (10%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
L+ L+ YQ +G+NWL L ++GIL D+MGLGKT+Q+ +++A +AE+
Sbjct: 837 LQAQLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTVQSISVMAY-LAEKHGI-----W 890
Query: 1502 HPSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFD-KH--------- 1551
P L++ P++ + +W EI KF V + L Y G+A DR LR+ +D KH
Sbjct: 891 GPFLVVAPASTLHNWQQEITKF--VPRLKVLPYWGTAADRKVLRKFWDRKHITYTEDAPF 948
Query: 1552 NVIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPI 1611
+V++TSY +V D Y ++ W Y ILDE IK+S+S ++ +RL+L+GTPI
Sbjct: 949 HVLVTSYQLVVSDVAYFQKMKWQYMILDEAQAIKSSQSSRWKSLLGFHCRNRLLLTGTPI 1008
Query: 1612 QNNITDLWSLFDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEALHKQV 1671
QNN+ +LW+L F+MP + +F + K + + S + + ++ LH +
Sbjct: 1009 QNNMQELWALLHFIMPSLFDSHDEFSEWFSKDIESHAQSNTKLNEDQ-----LKRLHMIL 1063
Query: 1672 MPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDESADK 1731
PF+LRR K V +L +KI +D +CDL+ Q Y S + +IS M + E A
Sbjct: 1064 KPFMLRRVKKHVQKELGDKIEEDIFCDLTYRQRAYY-----SNLRNQISIMDLI-EKATI 1117
Query: 1732 GEGNNVSAKASTHVFQALQYLLKLCSHPLL 1761
G+ N+ + + K+C+HP L
Sbjct: 1118 GDDNDTGT-----LMNLVMQFRKVCNHPDL 1142
>sp|Q9NEL2|SSL1_CAEEL Helicase ssl-1 OS=Caenorhabditis elegans GN=ssl-1 PE=2 SV=4
Length = 2395
Score = 173 bits (439), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 162/323 (50%), Gaps = 33/323 (10%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
++ LR YQ G++W+ L L+GIL D+MGLGKT+Q ++ +A S SI
Sbjct: 554 IRGQLREYQMVGLDWMVTLYEKNLNGILADEMGLGKTIQTISL----LAHMACSESI--W 607
Query: 1502 HPSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFDKHN---VIITSY 1558
P LI+ P++++ +W E +K+ + L Y G+A++R R+ + K N V ITSY
Sbjct: 608 GPHLIVVPTSVILNWEMEFKKWCPA--LKILTYFGTAKERAEKRKGWMKPNCFHVCITSY 665
Query: 1559 DVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPIQNNITDL 1618
V +D Q W Y ILDE IKN KS+ A+ ++A RL+L+GTP+QN++ +L
Sbjct: 666 KTVTQDIRAFKQRAWQYLILDEAQNIKNWKSQRWQALLNVRARRRLLLTGTPLQNSLMEL 725
Query: 1619 WSLFDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEALHKQVMPFLLRR 1678
WSL FLMP + F+ + PL + + E + LHK + PF+LRR
Sbjct: 726 WSLMHFLMPTIFSSHDDFKDWFSNPLTGMMEG-----NMEFNAPLIGRLHKVLRPFILRR 780
Query: 1679 TKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDESADKGEGNNVS 1738
K EV LPEK C LS Q LY+ F ++ +E N+
Sbjct: 781 LKKEVEKQLPEKTEHIVNCSLSKRQRYLYDDFMSRRSTKE-----------------NLK 823
Query: 1739 AKASTHVFQALQYLLKLCSHPLL 1761
+ V + L K C+HP L
Sbjct: 824 SGNMMSVLNIVMQLRKCCNHPNL 846
>sp|A1CZE5|INO80_NEOFI Putative DNA helicase ino80 OS=Neosartorya fischeri (strain ATCC 1020
/ DSM 3700 / FGSC A1164 / NRRL 181) GN=ino80 PE=3 SV=1
Length = 1708
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/334 (32%), Positives = 176/334 (52%), Gaps = 42/334 (12%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
L L+ YQ +G+NWL L ++GIL D+MGLGKT+Q+ +++A + E+
Sbjct: 829 LTAKLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAY----------LAEV 878
Query: 1502 H----PSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFD-KH----- 1551
H P L+I P++ + +W EI KF V + L Y GSA+DR LR+ +D KH
Sbjct: 879 HNIWGPFLVIAPASTLHNWQQEITKF--VPDIKVLPYWGSAKDRKVLRKFWDRKHITYTK 936
Query: 1552 ----NVIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILS 1607
+V++TSY +V D+ Y ++ W Y ILDE IK+S+S + +RL+L+
Sbjct: 937 ESEFHVLVTSYQLVVLDSQYFQKVKWQYMILDEAQAIKSSQSSRWKNLLGFHCRNRLLLT 996
Query: 1608 GTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEAL 1667
GTPIQNN+ +LW+L F+MP + +F + K + + S + + + L
Sbjct: 997 GTPIQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQ-----LRRL 1051
Query: 1668 HKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDE 1727
H + PF+LRR K V +L +K+ +D +CDL+ Q Y + + +S M +++
Sbjct: 1052 HMILKPFMLRRVKKHVQQELGDKVEKDVFCDLTYRQRAYY-----ANLRNRVSIMDLIEK 1106
Query: 1728 SADKGEGNNVSAKASTHVFQALQYLLKLCSHPLL 1761
+A E + ST + + K+C+HP L
Sbjct: 1107 AAVGDEAD------STTLMNLVMQFRKVCNHPDL 1134
>sp|O13682|SWR1_SCHPO Helicase swr1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=swr1 PE=3 SV=1
Length = 1288
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 163/330 (49%), Gaps = 37/330 (11%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
+ TLR YQQ G+ WL L +GIL D+MGLGKT+Q A++A E+ E
Sbjct: 443 FRGTLREYQQYGLEWLTALHDSNTNGILADEMGLGKTIQTIALLAHLACEK------ENW 496
Query: 1502 HPSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQF---DKHNVIITSY 1558
P LII P++++ +W E +KF+ L Y G+ Q+R R + D +V ITSY
Sbjct: 497 GPHLIIVPTSVMLNWEMEFKKFL--PGFKILTYYGNPQERKEKRSGWYKPDTWHVCITSY 554
Query: 1559 DVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPIQNNITDL 1618
+V +D + W Y ILDE H IKN +S+ ++ A HRL+L+GTP+QNN+ +L
Sbjct: 555 QLVLQDHQPFRRKKWQYMILDEAHNIKNFRSQRWQSLLNFNAEHRLLLTGTPLQNNLVEL 614
Query: 1619 WSLFDFLMPGFLGTE-------RQFQATYGKPLVAARDSKCSAKDAEAGVLAMEALHKQV 1671
WSL FLMP + + FQ + KP+ + +A LH+ +
Sbjct: 615 WSLLYFLMPAGVTQNNSAFANLKDFQDWFSKPMDRLIEEGQDMNPEAMNTVA--KLHRVL 672
Query: 1672 MPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDESADK 1731
P+LLRR K EV +P K YC LS Q LY+ F +EI +
Sbjct: 673 RPYLLRRLKTEVEKQMPAKYEHVVYCQLSKRQRFLYDDFINRARTREILA---------- 722
Query: 1732 GEGNNVSAKASTHVFQALQYLLKLCSHPLL 1761
GN +S + L L K+C+HP L
Sbjct: 723 -SGNFMS------IINCLMQLRKVCNHPNL 745
>sp|P0CO18|SWR1_CRYNJ Helicase SWR1 OS=Cryptococcus neoformans var. neoformans serotype D
(strain JEC21 / ATCC MYA-565) GN=SWR1 PE=3 SV=1
Length = 1246
Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/335 (34%), Positives = 163/335 (48%), Gaps = 44/335 (13%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
L+ TLR YQQ G+ WLA L ++GIL D+MGLGKT+Q A++ ++
Sbjct: 389 LRGTLRPYQQAGLEWLASLWSNNMNGILADEMGLGKTIQTIALLGHLACDKGVWGQ---- 444
Query: 1502 HPSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFDKHN---VIITSY 1558
LII P++++ +W E +KF+ M L Y G+ ++R R + N V ITSY
Sbjct: 445 --HLIIVPTSVILNWEMEFKKFL--PGMKVLTYYGNQKERKEKRVGWHTENTWQVCITSY 500
Query: 1559 DVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPIQNNITDL 1618
+V D + W Y ILDE H IKN +S+ + KA RL+L+GTP+QNN+ +L
Sbjct: 501 QIVLADQHIFRRKNWCYMILDEAHNIKNFRSQRWQTLLGFKAQRRLLLTGTPLQNNLMEL 560
Query: 1619 WSLFDFLMPGFLGTE----------RQFQATYGKPLVAARDSKCSAKDA--EAGVLAMEA 1666
WSL FLMPG +G + ++F + P+ D DA E + +
Sbjct: 561 WSLLYFLMPGGIGADATAVVGFANHKEFMEWFSNPM----DKAIETGDAMDEETLETVAK 616
Query: 1667 LHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVD 1726
LH + PF+LRR K EV + LP K YC LS Q LY++F + E
Sbjct: 617 LHTLLRPFILRRLKSEVETQLPGKFEHVVYCRLSKRQRFLYDEFMSRASTHEA------- 669
Query: 1727 ESADKGEGNNVSAKASTHVFQALQYLLKLCSHPLL 1761
++ V L L K+C+HP L
Sbjct: 670 ----------LTTGGYLGVMNTLMQLRKVCNHPDL 694
>sp|P0CO19|SWR1_CRYNB Helicase SWR1 OS=Cryptococcus neoformans var. neoformans serotype D
(strain B-3501A) GN=SWR1 PE=3 SV=1
Length = 1246
Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/335 (34%), Positives = 163/335 (48%), Gaps = 44/335 (13%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
L+ TLR YQQ G+ WLA L ++GIL D+MGLGKT+Q A++ ++
Sbjct: 389 LRGTLRPYQQAGLEWLASLWSNNMNGILADEMGLGKTIQTIALLGHLACDKGVWGQ---- 444
Query: 1502 HPSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFDKHN---VIITSY 1558
LII P++++ +W E +KF+ M L Y G+ ++R R + N V ITSY
Sbjct: 445 --HLIIVPTSVILNWEMEFKKFL--PGMKVLTYYGNQKERKEKRVGWHTENTWQVCITSY 500
Query: 1559 DVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPIQNNITDL 1618
+V D + W Y ILDE H IKN +S+ + KA RL+L+GTP+QNN+ +L
Sbjct: 501 QIVLADQHIFRRKNWCYMILDEAHNIKNFRSQRWQTLLGFKAQRRLLLTGTPLQNNLMEL 560
Query: 1619 WSLFDFLMPGFLGTE----------RQFQATYGKPLVAARDSKCSAKDA--EAGVLAMEA 1666
WSL FLMPG +G + ++F + P+ D DA E + +
Sbjct: 561 WSLLYFLMPGGIGADATAVVGFANHKEFMEWFSNPM----DKAIETGDAMDEETLETVAK 616
Query: 1667 LHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVD 1726
LH + PF+LRR K EV + LP K YC LS Q LY++F + E
Sbjct: 617 LHTLLRPFILRRLKSEVETQLPGKFEHVVYCRLSKRQRFLYDEFMSRASTHEA------- 669
Query: 1727 ESADKGEGNNVSAKASTHVFQALQYLLKLCSHPLL 1761
++ V L L K+C+HP L
Sbjct: 670 ----------LTTGGYLGVMNTLMQLRKVCNHPDL 694
>sp|Q59KI4|INO80_CANAL Putative DNA helicase INO80 OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=INO80 PE=3 SV=1
Length = 1387
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/279 (36%), Positives = 159/279 (56%), Gaps = 23/279 (8%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
LK TL+ YQ +G+NWLA L ++GIL D+MGLGKT+Q+ +++A +AE +
Sbjct: 668 LKCTLKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISVLAY-LAE-----TYNMW 721
Query: 1502 HPSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFDKH---------- 1551
P L++ P++ + +W EI KF V L Y G+A+DR LR+ +D+
Sbjct: 722 GPFLVVTPASTLHNWQQEITKF--VPEFKVLPYWGNAKDRKILRKFWDRKSLRYDKDSPF 779
Query: 1552 NVIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPI 1611
+V++TSY ++ D Y ++ W Y ILDE IK+S S ++ L +RL+L+GTPI
Sbjct: 780 HVLVTSYQLIVADIAYFQKMKWQYMILDEAQAIKSSSSSRWKSLLNLTCRNRLLLTGTPI 839
Query: 1612 QNNITDLWSLFDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEALHKQV 1671
QN++ +LW+L F+MP + +F + K + + S S + + + LH +
Sbjct: 840 QNSMQELWALLHFIMPSIFDSHDEFSDWFAKDIESHAQSNTSLDEQQ-----LRRLHMIL 894
Query: 1672 MPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKF 1710
PF+LRR K V S+L +K+ D YCDL+ Q KLY++
Sbjct: 895 KPFMLRRIKKNVQSELGDKVEIDVYCDLTTRQKKLYQQL 933
>sp|A4R227|INO80_MAGO7 Putative DNA helicase INO80 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=INO80 PE=3 SV=1
Length = 1944
Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 178/351 (50%), Gaps = 43/351 (12%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
L TL+ YQ +G+NWL L ++GIL D+MGLGKT+Q+ +++A + E
Sbjct: 1074 LTATLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAY----------LAEH 1123
Query: 1502 H----PSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFD-KH----- 1551
H P L++ P++ + +W EI++F V + + Y GSA DR LR+ +D KH
Sbjct: 1124 HDIWGPFLVVAPASTLHNWEQEIKRF--VPDLKIVPYWGSASDRKILRKFWDRKHSTYKR 1181
Query: 1552 ----NVIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILS 1607
+V ITSY +V D Y ++ W Y ILDE IK+S+S + +RL+L+
Sbjct: 1182 DAQFHVAITSYQMVVSDVAYFQKMKWQYMILDEAQAIKSSQSSRWKCLLSFHCRNRLLLT 1241
Query: 1608 GTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEAL 1667
GTPIQNN+ +LW+L F+MP + +F + K + + S + + ++ L
Sbjct: 1242 GTPIQNNMQELWALLHFIMPSLFDSHEEFSDWFSKDIESHAQSNSKLNEDQ-----LKRL 1296
Query: 1668 HKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDE 1727
H + PF+LRR K V +L +KI D YCDL+ Q Y + +IS M + E
Sbjct: 1297 HMILKPFMLRRVKKHVQKELGDKIELDVYCDLTYRQRAYYANL-----RNQISIMDLI-E 1350
Query: 1728 SADKGEGNNVSAKASTHVFQALQYLLKLCSHP-LLVLGDKSPESLLCHLSE 1777
A G+ N+ S + + K+C+HP L D S L +E
Sbjct: 1351 KATLGDDND-----SGTLMNLVMQFRKVCNHPDLFERADTSSPLALVRFAE 1396
>sp|Q9UTN6|SNF21_SCHPO Chromatin structure-remodeling complex subunit snf21
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf21 PE=1 SV=1
Length = 1199
Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 1446 LRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEIHPSL 1505
L+ YQ G+ W+ L L+GIL D+MGLGKT+Q +++ I ++R + P L
Sbjct: 417 LKEYQLRGLQWMISLYNNHLNGILADEMGLGKTIQTISLITHLIEKKRQNG------PFL 470
Query: 1506 IICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFDKHN--VIITSYDVVRK 1563
+I P + + +W E E++ + + Y G Q R AL Q N V++T+Y+ + K
Sbjct: 471 VIVPLSTLTNWTMEFERW--APSIVKIVYKGPPQVRKALHPQVRHSNFQVLLTTYEYIIK 528
Query: 1564 DADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAA-HRLILSGTPIQNNITDLWSLF 1622
D L ++ W Y I+DEGH +KN++SK+T + ++ +RLIL+GTP+QNN+ +LW+L
Sbjct: 529 DRPLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRLILTGTPLQNNLPELWALL 588
Query: 1623 DFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEALHKQVMPFLLRRTKDE 1682
+F++P + + F + P E +L + LHK + PFLLRR K +
Sbjct: 589 NFVLPRIFNSIKSFDEWFNTPFANTGGQDKMELTEEESLLVIRRLHKVLRPFLLRRLKKD 648
Query: 1683 VLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDESADKGEGNNVSAKAS 1742
V ++LP+K+ + C +S +Q KLY + M+ V E A +G+ + +
Sbjct: 649 VEAELPDKVEKVIRCQMSGLQQKLYYQMKK-------HGMLYV-EDAKRGK-TGIKGLQN 699
Query: 1743 THVFQALQYLLKLCSHPLL 1761
T V Q L K+C+HP +
Sbjct: 700 T-VMQ----LKKICNHPFV 713
>sp|Q5ARK3|SWR1_EMENI Helicase swr1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=swr1 PE=3 SV=2
Length = 1698
Score = 171 bits (434), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/333 (34%), Positives = 172/333 (51%), Gaps = 41/333 (12%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
L+ TLR YQ G++WLA L ++GIL D+MGLGKT+Q A++A E
Sbjct: 821 LRGTLREYQHFGLDWLAGLYSNHINGILADEMGLGKTIQTIALLAHLAVEHGVWG----- 875
Query: 1502 HPSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQF---DKHNVIITSY 1558
P L++ P++++ +W E +K+ + Y G+ ++R R + + NV+ITSY
Sbjct: 876 -PHLVVVPTSVILNWEMEFKKW--CPGFKIMTYYGNQEERRQKRRGWMDDNSWNVLITSY 932
Query: 1559 DVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPIQNNITDL 1618
+V +D L + W+Y ILDE H IKN +S+ A+ + RL+L+GTP+QNN+T+L
Sbjct: 933 QLVLQDQQVLKRRSWHYMILDEAHNIKNFRSQRWQALLTFRTRARLLLTGTPLQNNLTEL 992
Query: 1619 WSLFDFLMP---------GFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEALHK 1669
WSL FLMP GF R F + +P+ + D EA + + LH
Sbjct: 993 WSLLFFLMPTDGDEAGIEGFADL-RNFSEWFRRPVEQILEHGRETMDDEAKQVVTK-LHT 1050
Query: 1670 QVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKF-SGSQAKQEISSMVKVDES 1728
+ P++LRR K +V +P K YC LS Q LY+ F S +Q K+ ++S
Sbjct: 1051 VLRPYILRRLKADVEKQMPGKYEHVVYCRLSKRQRYLYDGFMSRAQTKETLAS------- 1103
Query: 1729 ADKGEGNNVSAKASTHVFQALQYLLKLCSHPLL 1761
GN +S + L L K+C+HP L
Sbjct: 1104 -----GNYLS------IINCLMQLRKVCNHPDL 1125
>sp|Q872I5|INO80_NEUCR Putative DNA helicase ino-80 OS=Neurospora crassa (strain ATCC 24698
/ 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=ino-80 PE=3 SV=3
Length = 1997
Score = 171 bits (433), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 114/347 (32%), Positives = 181/347 (52%), Gaps = 36/347 (10%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
L L+ YQ +G+NWL L ++GIL D+MGLGKT+Q+ +++A +AE+ +
Sbjct: 1114 LNCQLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTVQSISVMAY-LAEK-----YDIW 1167
Query: 1502 HPSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFD-KH--------- 1551
P L++ P++ + +W EI KF V L Y G+A DR LR+ +D KH
Sbjct: 1168 GPFLVVAPASTLHNWQQEITKF--VPQFKVLPYWGTAGDRKVLRKFWDRKHTTYKKDAPF 1225
Query: 1552 NVIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPI 1611
+V+ITSY +V D Y ++ W Y ILDE IK+S+S + +RL+L+GTPI
Sbjct: 1226 HVMITSYQLVVSDVAYFQKMKWQYMILDEAQAIKSSQSSRWKCLLGFHCRNRLLLTGTPI 1285
Query: 1612 QNNITDLWSLFDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEALHKQV 1671
QNN+ +LW+L F+MP + +F + K + + S + + ++ LH +
Sbjct: 1286 QNNMQELWALLHFIMPSLFDSHDEFSEWFSKDIESHAQSNTKLNEDQ-----LKRLHMIL 1340
Query: 1672 MPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDESADK 1731
PF+LRR K V +L +KI D +CDL+ Q +Y + + +IS M ++++
Sbjct: 1341 KPFMLRRVKKHVQKELGDKIEMDVFCDLTYRQRAMY-----ANLRNQISIMDLIEKAT-- 1393
Query: 1732 GEGNNVSAKASTHVFQALQYLLKLCSHP-LLVLGDKSPESLLCHLSE 1777
G++ SA V Q K+C+HP L D + H +E
Sbjct: 1394 -LGDDDSASLMNLVMQ----FRKVCNHPDLFERADTASPYSFGHFAE 1435
>sp|O14148|INO80_SCHPO Putative DNA helicase ino80 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=ino80 PE=1 SV=4
Length = 1604
Score = 171 bits (433), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 181/346 (52%), Gaps = 44/346 (12%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
L L+ YQ +G+NWLA L ++GIL D+MGLGKT+Q+ +++A + E
Sbjct: 838 LMCKLKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISVMAY----------LAET 887
Query: 1502 H----PSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFDKHN----- 1552
H P L+I P++ + +W EI +F V + + Y GS +DR LR+ + + N
Sbjct: 888 HNIWGPFLVIAPASTLHNWQQEITRF--VPKLKCIPYWGSTKDRKILRKFWCRKNMTYDE 945
Query: 1553 -----VIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILS 1607
V++TSY +V DA Y + W Y ILDE IK+S S ++ K +RL+L+
Sbjct: 946 NSPFHVVVTSYQLVVLDAQYFQSVKWQYMILDEAQAIKSSSSSRWKSLLAFKCRNRLLLT 1005
Query: 1608 GTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEAL 1667
GTPIQN + +LW+L F+MP + +F + K + + S + + ++ L
Sbjct: 1006 GTPIQNTMQELWALLHFIMPSLFDSHNEFSEWFSKDIESHAQSNTQLNEQQ-----LKRL 1060
Query: 1668 HKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDE 1727
H + PF+LRR K V S+L EKI ++ YCDL+ Q LY QA + S+ ++ E
Sbjct: 1061 HMILKPFMLRRVKKNVQSELGEKIEKEVYCDLTQRQKILY------QALRRQISIAELLE 1114
Query: 1728 SADKGEGNNVSAKASTHVFQALQYLLKLCSHPLLVLGD--KSPESL 1771
A G + V++ + + K+C+HP L + +SP SL
Sbjct: 1115 KAILGGDDTVAS-----IMNLVMQFRKVCNHPDLFEREDVRSPLSL 1155
>sp|P75093|Y020_MYCPN Uncharacterized ATP-dependent helicase MPN_020 OS=Mycoplasma
pneumoniae (strain ATCC 29342 / M129) GN=MPN_020 PE=3
SV=1
Length = 1030
Score = 171 bits (432), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 114/335 (34%), Positives = 174/335 (51%), Gaps = 50/335 (14%)
Query: 1430 NSHIDDYKLGTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDI 1489
N+++ D L + +LR YQQEG+ W+ L+ K GIL D+MGLGKT+Q V +
Sbjct: 562 NNNVFDLSLEHKKITSLRNYQQEGVKWIRGLEENKFGGILADEMGLGKTVQ----VIFAL 617
Query: 1490 AERRASNSIEEIHPSLIICPSTLVGHWAFEIEKF---IDVSLMSTLQYVGSAQDRIALRE 1546
+ N + PSLII P++L+ +W E EKF I V + + +++R L E
Sbjct: 618 LDSYLKNHVN--LPSLIIVPASLLLNWKSEFEKFAPQIKVKVANI-----PSKERGELYE 670
Query: 1547 QFDKHNVIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLIL 1606
+ + ++I S++V+R D + + ++Y ++DE IKN S IT A K++K L L
Sbjct: 671 KLT-NEILIVSFNVLRSDVKLITKQRFHYVVIDEAQGIKNDSSSITKAAKKVKGNFCLAL 729
Query: 1607 SGTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEA 1666
+GTPI+N + DLWS FDF++P FLG ++QF + K E +
Sbjct: 730 TGTPIENRLLDLWSCFDFVLPSFLGNKKQFTDQFEK---------------EKTDQSFHL 774
Query: 1667 LHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVD 1726
L ++ PF+LRRTK +VL +LP KI D Y +L+ + KLYE
Sbjct: 775 LMQRTSPFILRRTKSKVLKELPNKITTDIYVELNPMHQKLYE------------------ 816
Query: 1727 ESADKG--EGNNVSAKASTHVFQALQYLLKLCSHP 1759
E D+G E + K+S ++ + L LCS P
Sbjct: 817 EERDRGLEEIKQIQDKSSFNILTLILKLRHLCSLP 851
>sp|Q4PGL2|INO80_USTMA Putative DNA helicase INO80 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=INO80 PE=3 SV=1
Length = 1910
Score = 171 bits (432), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 173/334 (51%), Gaps = 42/334 (12%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
L L+ YQ +G+NWLA L ++GIL D+MGLGKT+Q+ +++A + E+
Sbjct: 994 LTCQLKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISLMAY----------LAEV 1043
Query: 1502 H----PSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFDKH------ 1551
H P L+I P++ + +W EI KF V + L Y G+ +DR LR+ +++
Sbjct: 1044 HDIWGPFLVIAPASTLHNWQQEISKF--VPTLKALPYWGNVKDRAVLRKFWNRKQISYNR 1101
Query: 1552 ----NVIITSYDVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILS 1607
+V++TSY +V D Y ++ W Y ILDE IK+S S + +RL+L+
Sbjct: 1102 DAPFHVLVTSYQLVVSDEKYFQRVKWQYMILDEAQAIKSSSSIRWKTLLGFNCRNRLLLT 1161
Query: 1608 GTPIQNNITDLWSLFDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEAL 1667
GTP+QN++ +LW+L F+MP + +F + K + + + K + + + + L
Sbjct: 1162 GTPVQNSMQELWALLHFIMPSLFDSHDEFSEWFSKDIESHAEQKGTLNEHQ-----LRRL 1216
Query: 1668 HKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISSMVKVDE 1727
H + PF+LRR K V ++L +KI D +CDLSA Q LY + + V E
Sbjct: 1217 HMILKPFMLRRIKKNVQNELGDKIEIDVFCDLSARQKMLYRGLRAN---------ISVAE 1267
Query: 1728 SADKGEGNNVSAKASTHVFQALQYLLKLCSHPLL 1761
D+ N+ + S + + K+C+HP L
Sbjct: 1268 LMDRATSNDEAGLKS--LMNLVMQFRKVCNHPEL 1299
>sp|Q4WAS9|SWR1_ASPFU Helicase swr1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 /
CBS 101355 / FGSC A1100) GN=swr1 PE=3 SV=1
Length = 1695
Score = 171 bits (432), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 116/348 (33%), Positives = 176/348 (50%), Gaps = 41/348 (11%)
Query: 1442 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEEI 1501
L+ TLR YQ G++WLA L ++GIL D+MGLGKT+Q A++A E E
Sbjct: 826 LRGTLREYQHYGLDWLAGLYNNHINGILADEMGLGKTIQTIALLAHLAVEH------EVW 879
Query: 1502 HPSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFDKH---NVIITSY 1558
P L++ P++++ +W E +K+ + Y GS ++R R+ + NV+ITSY
Sbjct: 880 GPHLVVVPTSVILNWEMEFKKW--CPGFKIMTYYGSIEERRQKRKGWTDDTSWNVLITSY 937
Query: 1559 DVVRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPIQNNITDL 1618
+V +D L + W+Y +LDE H IKN +S+ + + RL+L+GTP+QNN+T+L
Sbjct: 938 QLVLQDQQVLKRRNWHYMVLDEAHNIKNFRSQKWQTLLTFRTRARLLLTGTPLQNNLTEL 997
Query: 1619 WSLFDFLMP---------GFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEALHK 1669
WSL FLMP GF R F + +P+ + D E + + LH
Sbjct: 998 WSLLFFLMPSDGDGTGIEGFADL-RNFSEWFRRPVEQILEHGRETMDDETKRVVTK-LHT 1055
Query: 1670 QVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSAVQLKLYEKF-SGSQAKQEISSMVKVDES 1728
+ P++LRR K +V +P K YC LS Q LY+ F S +Q K+ ++S
Sbjct: 1056 ILRPYILRRLKADVEKQMPAKYEHVVYCRLSKRQRFLYDGFMSMAQTKETLAS------- 1108
Query: 1729 ADKGEGNNVSAKASTHVFQALQYLLKLCSHPLLVLGDKSPESLLCHLS 1776
GN +S + L L K+C+HP L + S + H S
Sbjct: 1109 -----GNYLS------IINCLMQLRKVCNHPDLFETRQISTSFVMHHS 1145
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 639,189,891
Number of Sequences: 539616
Number of extensions: 26761691
Number of successful extensions: 73392
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 225
Number of HSP's successfully gapped in prelim test: 169
Number of HSP's that attempted gapping in prelim test: 72183
Number of HSP's gapped (non-prelim): 725
length of query: 1806
length of database: 191,569,459
effective HSP length: 132
effective length of query: 1674
effective length of database: 120,340,147
effective search space: 201449406078
effective search space used: 201449406078
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)