BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000238
(1805 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255560902|ref|XP_002521464.1| Myosin-13, putative [Ricinus communis]
gi|223539363|gb|EEF40954.1| Myosin-13, putative [Ricinus communis]
Length = 1155
Score = 105 bits (263), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 266/959 (27%), Positives = 423/959 (44%), Gaps = 221/959 (23%)
Query: 1 MATEADMPEPITIRKGEGEITYPGSGHFDSTADETFSRELKKFQGTLNVPPDTVEYLGET 60
MATEAD+PEP ++ + E R L G N PP+T +YL
Sbjct: 1 MATEADIPEPASLLERE------------------VHRHLNP--GEFNHPPETADYLV-- 38
Query: 61 KDMQAASDFGAEAMNTAIKFNVETAEGETFLGSPSAVQVSIEDTCRVSKSSEPEEVTLQA 120
M+ +++ +A++++ + N EG +FL SPS E+T ++ + +E+ Q+
Sbjct: 39 --MEVSTNADVKAISSSFEANAGATEGASFLKSPSVAGAPEEETRETQETHQADEIPFQS 96
Query: 121 GNEAPENGKQTQNTSTIEVAGERGTEENKVT-EDSQEKPVEDKSNEKETSAIHNYEKDGT 179
E G T VA E G++EN+V+ E + E++S+E
Sbjct: 97 -----EKGMLKDKIFT--VAEETGSKENEVSCETEEAAEKEERSHE-------------- 135
Query: 180 MTDVNTDLGSNEQVVNVLEAVSDRNKEDLIHIPDPTVISLNKSVETVVEPCVKAESTSEV 239
++D T L +N++ ++LEA S +H T L+ VET PC+ E
Sbjct: 136 ISDA-TKLKTNKE-ASILEASS------ALH----TSEDLDTIVETQRNPCLNNE----- 178
Query: 240 EFTGEEMRETSFTEAEKSSNLTDEVPEATKPSEGVADENEKEKST-YEDAEGIFPSTTDI 298
++ P +P E + ENE + E I ++ D
Sbjct: 179 ----------------------EKCPRLAQPIEKIESENEGIRHYEIEQTSSIVAASPDN 216
Query: 299 QRNEEAILKIRERDNEMLDTQSVTPATDVSGVYEAEPEESAKLKEASSILCEKKSQ---- 354
Q ++EA L I E E LD SVT D S E E KL+E +I + +SQ
Sbjct: 217 QNDKEASLTIIENVEEKLDIPSVTLTRDKSSTPEPGVEAEDKLEENFNIASKVESQDIKM 276
Query: 355 -DETELSKDI--TNNKNSIDTPA--------MQTEGK-------------DIVKESP-EE 389
DE +++ + T K+ ++ P+ +Q GK D V+ S EE
Sbjct: 277 SDENDMTSLLEETEEKSHVEIPSAPQCEEMYLQELGKTEISKAASEICPEDAVRRSQEEE 336
Query: 390 VNEQI---EMTEKSAG----KDYESRDQKGDGSIMKDEDT-SSINEELPAKEASSGGNSY 441
+ QI + KS G KD S +QK D + K E+ +I+EE +A S
Sbjct: 337 CDIQIIERTLEAKSRGAEEVKDEMSPEQKLDILLTKHEEVKQNIDEEQTVSKA-LAEESG 395
Query: 442 EEESSVTATKDDVTDREITDAFEQNQNGTTNHEDRPENLQQEKPKKEKLEGSLNLLAEEF 501
+E + +DV D A +Q++N T N EK++ SL ++ E+
Sbjct: 396 DERGHTSIAGEDVIDA--MTAPDQSKNETEN---------------EKIQTSLEMVTEKI 438
Query: 502 NKAAETEQAEAITTVNKETPIKSEEESLERE----------------IKNV-----SEVD 540
++ A E +E I ++ I+++EES +R+ I V +E+
Sbjct: 439 DRTASKEWSETIIRAKEDASIENQEESFDRKEKEDESVDNEAVRIDGIPKVEDLPPTELH 498
Query: 541 EKTECAEVEAQNKNASDLHDIPVLDEEAGETEGKDLEEVIKTEPKGTIQEANEEYTKEEE 600
KTE AEVE NKN L+ I +L++E EG+ L++V P+ I E NE EEE
Sbjct: 499 AKTEIAEVENPNKNEDVLNAIHLLEKETLLVEGERLDKVSDFGPQDQIYETNEAAKDEEE 558
Query: 601 KDIEDAPEACQSSNSTIIEQTPLEEAESAELILKASETDEKKLQEASGLDFDKTSVIMDK 660
D D+ +AC+S+ +E + S E + SET+ + L + LD ++ +
Sbjct: 559 HDDNDS-QACESTMKPSLELPSEKGTVSTEPSSETSETEIETLSKVHKLDSEENLETTEA 617
Query: 661 GENTNQETQKIGEACDATTEEILANIADAETSVEVNNAVFVRDEKAKENIQAERSPLEVA 720
++ ++ + EAC++ +++ + +NA E+A ENIQA A
Sbjct: 618 KKSMKEDIWE--EACESEIQKLSTS----------DNAEKCHAEEANENIQA-------A 658
Query: 721 PELTDQDESGIAGDNEKRNNITHEEVHDGTKVTDSVVAIDGQVIEGNVAHISAESIEKPN 780
L D+ E D+ K +I EEV T + + A D I NVAH+S+E I +
Sbjct: 659 TPLKDEIE-----DDGKAKSIIDEEV---TGIGE---ADDESNISDNVAHLSSEIIIQER 707
Query: 781 VESSEGN--VAERSEGENDIEQVTEDSSIRCLAPEAVEEVPVKNLE-------QESTGEI 831
ES + + S+GE D E V+E E+V+E VKN++ + S+ EI
Sbjct: 708 DESPQQTEKQVDASKGE-DTEAVSE---------ESVKEGTVKNIQDDKNEIDKSSSREI 757
Query: 832 PEKSDTAEATDSIGQETSKNKESPKEIVDDSKVKGDSSLEEKRNEDINP----AMVAEE 886
E+S+TAE DSI E+ ++ E+P + S VK SL + INP A +AEE
Sbjct: 758 FEESETAEKVDSISDESKQSDENPDSTPECSLVKDQESL-----QCINPIVEQASLAEE 811
>gi|359488809|ref|XP_002272929.2| PREDICTED: uncharacterized protein LOC100264483 [Vitis vinifera]
Length = 4565
Score = 104 bits (259), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 90/156 (57%)
Query: 1 MATEADMPEPITIRKGEGEITYPGSGHFDSTADETFSRELKKFQGTLNVPPDTVEYLGET 60
MATEA +PE I+I KGE E D+TADE + ELK +G LN PP+ EY +T
Sbjct: 1 MATEAYIPEFISITKGEAEEKNLTRVQLDATADENYPGELKNVEGALNDPPEIFEYSEKT 60
Query: 61 KDMQAASDFGAEAMNTAIKFNVETAEGETFLGSPSAVQVSIEDTCRVSKSSEPEEVTLQA 120
K+MQ A+D E +T K NV T+EGE+FL SPS +V+ E+T RVS+ + E+ QA
Sbjct: 61 KNMQVANDIAIETESTVNKGNVGTSEGESFLESPSVSKVAREETDRVSEDYQAREIPNQA 120
Query: 121 GNEAPENGKQTQNTSTIEVAGERGTEENKVTEDSQE 156
E + Q +E A E G EN+ E+ +E
Sbjct: 121 EKEIFREETKLQKYKNLEGADETGKVENEGMEEIKE 156
>gi|296087613|emb|CBI34869.3| unnamed protein product [Vitis vinifera]
Length = 1608
Score = 103 bits (257), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 90/156 (57%)
Query: 1 MATEADMPEPITIRKGEGEITYPGSGHFDSTADETFSRELKKFQGTLNVPPDTVEYLGET 60
MATEA +PE I+I KGE E D+TADE + ELK +G LN PP+ EY +T
Sbjct: 1 MATEAYIPEFISITKGEAEEKNLTRVQLDATADENYPGELKNVEGALNDPPEIFEYSEKT 60
Query: 61 KDMQAASDFGAEAMNTAIKFNVETAEGETFLGSPSAVQVSIEDTCRVSKSSEPEEVTLQA 120
K+MQ A+D E +T K NV T+EGE+FL SPS +V+ E+T RVS+ + E+ QA
Sbjct: 61 KNMQVANDIAIETESTVNKGNVGTSEGESFLESPSVSKVAREETDRVSEDYQAREIPNQA 120
Query: 121 GNEAPENGKQTQNTSTIEVAGERGTEENKVTEDSQE 156
E + Q +E A E G EN+ E+ +E
Sbjct: 121 EKEIFREETKLQKYKNLEGADETGKVENEGMEEIKE 156
Score = 60.5 bits (145), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 126/232 (54%), Gaps = 22/232 (9%)
Query: 1500 IPESVDQSPVM----NLEDNRKREDKSTREIFENSKTSGAAEIAAHETSTTIDSITEILD 1555
I +SV+ +P N DN K+++K EIFE+S+ + A E E +ILD
Sbjct: 604 IADSVEGTPGSTKEENFTDNEKQDEKCKEEIFESSEMARAVECVESE---------KILD 654
Query: 1556 SSPVKQVESVQNEENNPTATESSAEEKINEDRGLVILAEGNSNDNEPIGAEDNIEKKSSI 1615
+S VK ES+Q E N E S EE+ +E R ++ E N ++ + + + ++++S
Sbjct: 655 TSMVKPKESLQGEGENQVPIEISREERRDEHR-YSVVDEDNDDNTGLVEVKYSGKEETSK 713
Query: 1616 GKEDLQHIQQENEPEGKHERFSFVMSDENEAFSTN--ADQSPSLMEVEASGDLNEAPRKE 1673
G+E+ + I Q++E K E+ VMS EA +++ ++ + E +A D+ E KE
Sbjct: 714 GEENTEWISQKDETGEKLEQSINVMSKVTEAINSSEYTEKITYIEEEQAIQDVEETFEKE 773
Query: 1674 DNDKETEEKVDTEDNKIVDEENHEIAAESSDASKSTD--VLDLKSEEEKMLV 1723
ET + D+E+ EE+ + AA +S+ SK+T+ VL+LKSE+ +M V
Sbjct: 774 ----ETNDTKDSEERGTASEEDLKPAAVASEMSKTTESTVLELKSEKGEMEV 821
>gi|147783375|emb|CAN59884.1| hypothetical protein VITISV_026166 [Vitis vinifera]
Length = 6311
Score = 86.7 bits (213), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 81/146 (55%)
Query: 11 ITIRKGEGEITYPGSGHFDSTADETFSRELKKFQGTLNVPPDTVEYLGETKDMQAASDFG 70
++KGE E D+TADE + ELK +G LN PP+ EY +TK+MQ A+D
Sbjct: 28 FFMQKGEAEEKNLTRVQLDATADENYPGELKNVEGALNDPPEIFEYSEKTKNMQVANDIA 87
Query: 71 AEAMNTAIKFNVETAEGETFLGSPSAVQVSIEDTCRVSKSSEPEEVTLQAGNEAPENGKQ 130
E +T K NV T+EGE+FL SPS +V+ E+T RVS+ + E+ QA E +
Sbjct: 88 IETESTVNKGNVGTSEGESFLESPSVSKVAREETDRVSEDYQAREIPNQAEKEIFREETK 147
Query: 131 TQNTSTIEVAGERGTEENKVTEDSQE 156
Q +E A E G EN+ E+ +E
Sbjct: 148 LQKYKNLEGADETGKVENEGMEEIKE 173
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 131/244 (53%), Gaps = 23/244 (9%)
Query: 1484 ENSTEQNVKESNSGGLIPESVDQSPVMNLEDNRKREDKSTREIFENSKTSGAAEIAAHET 1543
E+S EQ + +S G P S + N DN K+++K EIFE+S+ + A E E
Sbjct: 605 EDSKEQTIADSVEG--TPGSTKEE---NFTDNEKQDEKCKEEIFESSEMARAVECVESE- 658
Query: 1544 STTIDSITEILDSSPVKQVESVQNEENNPTATESSAEEKINEDRGLVILAEGNSNDNEPI 1603
+ILD+S VK ES+Q E N E S EE+ +E R V+ E N ++ +
Sbjct: 659 --------KILDTSMVKPKESLQGEGENQVPIEISXEERRDEHRYSVV-DEDNDDNTGLV 709
Query: 1604 GAEDNIEKKSSIGKEDLQHIQQENEPEGKHERFSFVMSDENEAFSTN--ADQSPSLMEVE 1661
+ + ++++S G+E+ + I Q++E K E+ VMS EA +++ ++ + E +
Sbjct: 710 EVKYSGKEETSKGEENTEWISQKDETGEKLEQSINVMSKVTEAINSSEYTEKITYIEEEQ 769
Query: 1662 ASGDLNEAPRKEDNDKETEEKVDTEDNKIVDEENHEIAAESSDASKSTD--VLDLKSEEE 1719
A D+ E KE ET + D+E+ EE+ + AA +S+ SK+T+ VL+LKSE+
Sbjct: 770 AIQDVEETFEKE----ETNDTKDSEERGTASEEDLKPAAVASEMSKTTESTVLELKSEKG 825
Query: 1720 KMLV 1723
+M V
Sbjct: 826 EMEV 829
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 154/282 (54%), Gaps = 45/282 (15%)
Query: 1078 PLSIEQETLVT----EGNIHEEEKSEGENNGHHDMEESNSRGLIPESESVEQSPV----K 1129
P SIE+ET+ + E + +EKS GE E+S + + ++SVE +P +
Sbjct: 577 PESIEEETVKSFQDDEKVLLADEKSRGE-------EDSKEQTI---ADSVEGTPGSTKEE 626
Query: 1130 NLENDNTEEDKSAGEIFDNSEALGTGESTVHKTSTTVESTTEILDPSHMKHGDSSQNE-E 1188
N ++ +++K EIF++SE + + VES +ILD S +K +S Q E E
Sbjct: 627 NFTDNEKQDEKCKEEIFESSE--------MARAVECVESE-KILDTSMVKPKESLQGEGE 677
Query: 1189 NQLTAVEPSAEDKGNEDRGPAMMAEEKSNENELLAVKDNSENKPSIGQEDSKHILQENEL 1248
NQ+ +E S E++ +E R +++ E+ + L+ VK + + + S G+E+++ I Q++E
Sbjct: 678 NQV-PIEISXEERRDEHRY-SVVDEDNDDNTGLVEVKYSGKEETSKGEENTEWISQKDET 735
Query: 1249 QKKNAQSLSVRSDENEESVVDADKSPCLMEI----GTQDLNEAPWKKDNDKDTEEKNDTK 1304
+K QS++V S E ++ ++ + + I QD+ E K EE NDTK
Sbjct: 736 GEKLEQSINVMSKVTE-AINSSEYTEKITYIEEEQAIQDVEETFEK-------EETNDTK 787
Query: 1305 DNQ---IAMEENLEINAESSDASKTTENAVSELKSEKDQMLV 1343
D++ A EE+L+ A +S+ SKTTE+ V ELKSEK +M V
Sbjct: 788 DSEERGTASEEDLKPAAVASEMSKTTESTVLELKSEKGEMEV 829
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.296 0.118 0.299
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,275,330,085
Number of Sequences: 23463169
Number of extensions: 1243287891
Number of successful extensions: 6174272
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3494
Number of HSP's successfully gapped in prelim test: 115742
Number of HSP's that attempted gapping in prelim test: 4188610
Number of HSP's gapped (non-prelim): 1080070
length of query: 1805
length of database: 8,064,228,071
effective HSP length: 157
effective length of query: 1648
effective length of database: 8,675,477,834
effective search space: 14297187470432
effective search space used: 14297187470432
T: 11
A: 40
X1: 17 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (21.8 bits)
S2: 85 (37.4 bits)