BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000247
(1790 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1
OS=Arabidopsis thaliana GN=At4g08350 PE=1 SV=2
Length = 1041
Score = 247 bits (630), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 134/298 (44%), Positives = 192/298 (64%), Gaps = 12/298 (4%)
Query: 174 FIPKEE-EMDEEEFDKMMEERYKSNKLIRYAEEDYEAKKMLEREYHMPCPEDPTIWKVKC 232
F+P++E + D E+ ++ ++ER+ S R+ EE E +E++ +P DP +W VKC
Sbjct: 134 FLPRDENDEDVEDLERRIQERFSS----RHHEEYDEEATEVEQQALLPSVRDPKLWMVKC 189
Query: 233 MAGRERQSAFCLMQKFVDLQSLGSKMQIISAFAVDHIKGFIFIEADKQCDINEACKGLSG 292
GRER+ A CLMQKF+D G+ +QI S A+DH+K FI++EADK+ + EA KG+
Sbjct: 190 AIGREREVAVCLMQKFIDR---GADLQIRSVVALDHLKNFIYVEADKEAHVKEAIKGMRN 246
Query: 293 IYYS-RLAPVPKNEVSHLLSAQIKRNEVSEGTWAYVKNGKYKGDLAQVVYVNNARKRATV 351
IY + ++ VP E++ +LS + K ++S TW +K G YKGDLA+VV V+N R+R TV
Sbjct: 247 IYANQKILLVPIREMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLAKVVDVDNVRQRVTV 306
Query: 352 KLIPRIDLQALAAKFGG-GVAMKKTDSPAPRLISPSELEEFRPLIQYRRDRDTGKVFENL 410
KLIPRIDLQALA+K G V+ KK P PR ++ E E ++ RRD TG FEN+
Sbjct: 307 KLIPRIDLQALASKLDGREVSKKKAFVPPPRFMNIDEARELHIRVERRRDHMTGDYFENI 366
Query: 411 DGMMLKDGYLYKKVSIDSLSCWGVVPSEEELLKF-QPSESNESADLEWLSQLYGERKK 467
GM+ KDG+ YK+VS+ S++ V P+ +EL KF +PSE+ E D LS L+ RKK
Sbjct: 367 GGMLFKDGFHYKQVSLKSITVQNVTPTFDELEKFNKPSENGE-GDFGGLSTLFANRKK 423
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 120/230 (52%), Gaps = 15/230 (6%)
Query: 481 EGSSGSSLENSFELYELVCFGRKDFGLIVGMEKDDHYKILKEGSEGPAVVTVERRTLKNG 540
E ++G + +EL++LV FG+I+ +E ++ +++LK + P V V+ R +K
Sbjct: 529 EVTTGVTKIGDYELHDLVLLDNLSFGVIIRLE-NEAFQVLKGVPDRPEVALVKLREIKCK 587
Query: 541 PFDMKFTALDQSMKVISLNDTARVSEGPSKDRQGIVKKIYRGILFIYDENETENGGYFCS 600
+ K D+ VI++ D RV EGPSK +QG VK IY+G+LFIYD + E+ G+ C+
Sbjct: 588 -LEKKINVQDRYKNVIAVKDDVRVIEGPSKGKQGPVKHIYKGVLFIYDRHHLEHAGFICA 646
Query: 601 KSQHCEKT-KVEACEGKGGGSGASGFEEFPSSPKSPLSPKRSWQ--------AREQNTEF 651
K C + + GG S + F + P SP R + + ++
Sbjct: 647 KCTSCIVVGGSRSGANRNGGDSLSRYGNFKAPAPVPSSPGRFQRGRGGGYNNSGGRHGGG 706
Query: 652 KRGDRDGMFAVGQTLRIRVGPLKGYLCRVLAVRYSDVTVKLDSQQKILTV 701
+ D + G T++IR+GP KGY V+ V+ + V V+L + KI+TV
Sbjct: 707 RGRGDDSLL--GTTVKIRLGPFKGYRGPVVEVKGNSVRVEL--EMKIVTV 752
>sp|O80770|SPT52_ARATH Putative transcription elongation factor SPT5 homolog 2
OS=Arabidopsis thaliana GN=At2g34210 PE=2 SV=2
Length = 989
Score = 236 bits (603), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 131/300 (43%), Positives = 191/300 (63%), Gaps = 17/300 (5%)
Query: 174 FIPKEEEMDEEEFDKMMEERYKSNKLIRYAEEDYEAKKM--LEREYHMPCPEDPTIWKVK 231
F P EE++DE E K ER + +YA++DYE + ++++ +P DP +W VK
Sbjct: 122 FHPHEEDVDELE--KRTLERLST----KYAKDDYELDDVNDVDQQALLPSVRDPKLWLVK 175
Query: 232 CMAGRERQSAFCLMQKFVDLQSLGSKMQIISAFAVDHIKGFIFIEADKQCDINEACKGLS 291
C GRER+ A CLMQK VD GS+ +I SA A+DH++ +++IEAD + + EA KG+
Sbjct: 176 CAIGREREVAVCLMQKIVDR---GSEFKIRSAIALDHLQNYVYIEADMEAHVKEAIKGMR 232
Query: 292 GIYYS-RLAPVPKNEVSHLLSAQIKRNEVSEGTWAYVKNGKYKGDLAQVVYVNNARKRAT 350
IY + ++ VP E++ +LS + K ++S +W +K G YKGDLAQVV V+N RKR T
Sbjct: 233 NIYANQKILLVPIKEMTAVLSVESKAIDLSRDSWVRMKLGIYKGDLAQVVDVDNVRKRVT 292
Query: 351 VKLIPRIDLQALAAKFGGGVAM-KKTDSPAPRLISPSELEEFRPLIQYRRDRDTGKVFEN 409
VKLIPRIDLQALA K G + KK +P PR ++ E E +++RRD TG FEN
Sbjct: 293 VKLIPRIDLQALANKLEGTENVKKKAFAPPPRFMNIDEARELHIRVEHRRDPMTGDYFEN 352
Query: 410 LDGMMLKDGYLYKKVSIDSLSCWGVVPSEEELLKFQPSESNESADLEWL--SQLYGERKK 467
+ GM+ KDG+LYKKVS S++ V P+ +EL +F+ NE+ +++++ S L+ RKK
Sbjct: 353 IGGMLFKDGFLYKKVSTKSIAAQNVTPTFDELERFK--RPNENGEIDFVDESTLFANRKK 410
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 124/276 (44%), Gaps = 51/276 (18%)
Query: 453 ADLEWLSQLYGERKKKRTTIVGKGGDKGEGSSGSSLENSFELYELVCFGRKDFGLIVGME 512
D L L K+ E + G + +EL++LV FG+I+ ++
Sbjct: 488 VDQHMLIILSDTTKEHICVFADHVAKSAEVTKGVTKIGDYELHDLVILSDFSFGVILKLD 547
Query: 513 KDDHYKILKEGSEGPAVVTVERRTLKNGPFDMKFTALDQSMKVISLNDTARVSEGPSKDR 572
+ +ILK + V V+ +K + K D+ V+++ D RV EGPSK +
Sbjct: 548 SEA-IQILKGVPDSSEVSIVKASEIKYKIWK-KINVQDRYKNVVAVKDVVRVIEGPSKGK 605
Query: 573 QGIVKKIYRGILFIYDENETENGGYFCSKSQHCEKTKVEACEGKGGGSGASGFEEFPSSP 632
QG V +IY+G+LFI+D + E+ G+ C T+ +C GG F +
Sbjct: 606 QGPVVQIYKGVLFIHDRHNLEHTGFIC--------TRCSSCVLAGGN--------FKTPA 649
Query: 633 KSPLSPKRSWQAREQNTEFKRGDR-------------------DGMFAVGQTLRIRVGPL 673
P SP+R F+R D D + VG ++IR+GP
Sbjct: 650 LVPPSPRR----------FQRADMGYNPGAGGRHQGGRGRRGDDHL--VGTYVKIRLGPF 697
Query: 674 KGYLCRVLAVRYSDVTVKLDSQQKILTVKGEHLAEV 709
KGY R++ V+ D V+++ + KI+TV+ + ++++
Sbjct: 698 KGYSGRLVEVK--DKLVRVELEAKIVTVERKAISDM 731
>sp|O13936|SPT5_SCHPO Transcription elongation factor spt5 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=spt5 PE=1 SV=1
Length = 990
Score = 144 bits (364), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 131/248 (52%), Gaps = 14/248 (5%)
Query: 213 LEREYHMPCPEDPTIWKVKCMAGRERQSAFCLMQKFVDLQSLGSKMQIISAFAVDHIKGF 272
+ + +P DP IW V+C G+E+ F +M+K +DLQ S ++IISAF D + G+
Sbjct: 228 VPQRLLLPSVNDPNIWAVRCKIGKEKDIVFTIMRKAMDLQYTSSPLEIISAFQRDSLVGY 287
Query: 273 IFIEADKQCDINEACKGLSGIYYSRLAPVPKNEVSHLLSAQIKRNEVSEGTWAYVKNGKY 332
I++EA KQ + +A G+ +Y + + VP E+ LL Q + E+ G + ++ GKY
Sbjct: 288 IYVEARKQSHVLDALNGVLNVYTNNMILVPIKEMPDLLKVQKQVVELLPGAYVRIRRGKY 347
Query: 333 KGDLAQVVYVNNARKRATVKLIPRIDLQALAAKFGGGVAMKKTDS-PAPRLISPSELEEF 391
GDLAQV ++ A V+++PRID + G+ K + + P RL + SE +
Sbjct: 348 AGDLAQVDNLSENGLTARVRIVPRID-------YSDGLKRKNSATRPQARLFNESEAFKS 400
Query: 392 RPLIQYRRDRDTGKVFENLDGMMLKDGYLYKKVSIDSLSCWGVVPSEEELLKFQPSESNE 451
P +R G + +DG+L K + I SL GV P+ +E+ KF P +NE
Sbjct: 401 NPSKFSKR----GPRLFLFNNEEFEDGFLVKDIRISSLITEGVNPTLDEVSKFNP--NNE 454
Query: 452 SADLEWLS 459
DL L+
Sbjct: 455 DLDLSSLA 462
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 111/230 (48%), Gaps = 22/230 (9%)
Query: 478 DKGEGSSGSSLENSFELYELVCFGRKDFGLIVGMEKDDHYKILKEGSEGPAVVTVERRTL 537
D GE SS ++ +++EL++LV I +++D YK++ + G V + T+
Sbjct: 566 DLGEASSAQAVNSAYELHDLVQLDVNTVACIFSVDRDT-YKVIDQNG-GVRTVLASQITM 623
Query: 538 KNGPFDMKFTALDQSMKVISLNDTARVSEGPSKDRQGIVKKIYRGILFIYDENETENGGY 597
++ + + A D++ I + D +V E + +QG + IYR +F+++ + EN G
Sbjct: 624 RHS--NRRGVATDRNGAEIRIGD--KVKEVGGEGKQGTILHIYRAFVFLHNRDIAENNGV 679
Query: 598 FCSKSQHCEKTKVEACEGKGGGSGASGFEEFPSSPKSPLSPKRSWQAREQNTEFKRGD-R 656
F ++S++ V KG A + P+ P P + KR R
Sbjct: 680 FSARSRN-----VATIAAKGARISADLTKMNPALSNGPALPPVA--------NLKRTIGR 726
Query: 657 DGMFAVGQTLRIRVGPLKGYLCRVLAVRYSDVTVKLDSQQKILTVKGEHL 706
D A+G T+RIR GP+KG L + ++ V+L + K++T+ E+L
Sbjct: 727 DK--AIGATVRIRRGPMKGLLGVIKDTTDANARVELHTGNKMVTIPKENL 774
>sp|Q4PIC4|SPT5_USTMA Transcription elongation factor SPT5 OS=Ustilago maydis (strain 521
/ FGSC 9021) GN=SPT5 PE=3 SV=1
Length = 1057
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 161/323 (49%), Gaps = 41/323 (12%)
Query: 145 GFADDDFMEELFDAQPKV---NNEMGQAHNLPFIPKEEEMDEEEFDKMMEERYKSNKLIR 201
GF ++D ++ D Q + N + + F +EE+ + E + + +RY + R
Sbjct: 231 GFIEEDIPDDTEDVQRRAAADNQRLDR-----FRRQEEDTNAEALAEELRQRYGRSA--R 283
Query: 202 YAEE-DYEAKKMLEREYHMPCPEDPTIWKVKCMAGRERQSAFCLMQKFVDLQSLGSKMQI 260
YA + DY + + MP EDP++W V C GRER L++K + S M+I
Sbjct: 284 YAAQSDYAE---VPQRLLMPSVEDPSLWGVPCKPGRERDIVMTLVRKAMAENFTSSPMRI 340
Query: 261 ISAFAVDHIKGFIFIEADKQCDINEACKGLSGIY---YSRLAPVPKNEVSHLLSAQIKRN 317
ISAF D I G +++EA + D+ +AC GL+G Y + L +P +E++ LL Q +N
Sbjct: 341 ISAFCRDSIPGRVYVEARRADDVVKACNGLAGAYARQTTSLHLIPISEMADLLKLQKVQN 400
Query: 318 EVSEGTWAYVKNGKYKGDLAQVVYVNNARKRATVKLIPRIDLQ---------ALAAKF-- 366
E+ G W +K GKY GDLAQV+ V+ + +K+IPRIDL +L K
Sbjct: 401 EIQVGGWVRIKRGKYAGDLAQVLDVSENGEEVGLKMIPRIDLNPKDSGLYTDSLGRKRKK 460
Query: 367 -GGGVAMKKTDSPAPRLISPSELEEFRPLIQYRRDRDTGK----VFENLDGMMLKDGYLY 421
G A P R +P E+++ Y RD T + VF+N D +DGYL
Sbjct: 461 GAGSSATTVAFRPPQRFFNPEEVQK-----AYPRDTPTKRGSQWVFQN-DSY--RDGYLE 512
Query: 422 KKVSIDSLSCWGVVPSEEELLKF 444
K V + + V P+ +E+ KF
Sbjct: 513 KDVRVTGIITENVNPTLDEITKF 535
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 480 GEGSSGSSLENSFELYELVCFGRKDFGLIVGMEKDDHYKILKEGSEGPAVVTVERRTLKN 539
E SG ++ + +EL+ LV + G+I +E++ +K+L + + VVTV+ +
Sbjct: 671 AEVGSGVNVISGYELHNLVQLDAQTVGIIFNIERES-FKVLDQTGQ---VVTVKPHQIST 726
Query: 540 GPFDMKFTALDQSMKVISLNDTARVSEGP-SKDRQGIVKKIYRG-ILFIYDENETENGGY 597
+ ALD I D + GP S+ RQG V IY+ ++F+++ TENGG
Sbjct: 727 KKDTSRAFALDHDGNEIRAGDMVKEVAGPFSRLRQGQVLHIYQSMVVFLHNREYTENGGV 786
Query: 598 FCSKSQHCEKTKVEACEGK 616
F ++++ E ++ K
Sbjct: 787 FIARARSLEPLAPKSVSTK 805
>sp|Q6FRZ5|SPT5_CANGA Transcription elongation factor SPT5 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=SPT5 PE=3 SV=1
Length = 1010
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 151/300 (50%), Gaps = 32/300 (10%)
Query: 177 KEEEMDEEEFDKMMEERY--KSNKLIRYAEED-YEAKKMLEREYHMPCPEDPTIWKVKCM 233
K E D + K + ERY S+K R A +D Y ++ L +P + TIW V+C
Sbjct: 191 KSSEEDAQRLAKELRERYGRSSSKQYRAAAQDGYVPQRFL-----LPSVDTATIWGVRCR 245
Query: 234 AGRERQSAFCLMQKFVDL-QSLGS-KMQIISAFAVDHIKGFIFIEADKQCDINEACKGLS 291
G+E++ L++K +L +++G K++I+S F D+ G I+IEA KQ I + C G+
Sbjct: 246 PGKEKELVRKLLKKKFNLDRAMGKRKLKILSIFQRDNYTGRIYIEAPKQSVIEKFCNGVP 305
Query: 292 GIYYSRLAPVPKNEVSHLLSAQIKRNEVS--EGTWAYVKNGKYKGDLAQVVYVNNARKRA 349
IY S+ +P E+ LL K ++V+ EG++ VK G YKGDLA V ++
Sbjct: 306 DIYISQKLLIPVQELPLLLKPS-KSDDVALEEGSYVRVKRGIYKGDLAMVDQISENNLEV 364
Query: 350 TVKLIPRIDLQALAAKFG--GGVAMKK-------TDSPAPRLISPSELEEFRPLIQYRRD 400
+K++PR+D KF V ++ PAP+L +P+ Y+RD
Sbjct: 365 MLKIVPRLDY----GKFDEIDPVTQQRKSRRPTFAHRPAPQLFNPTMALRLDQANLYKRD 420
Query: 401 RDTGKVFENLDGMMLKDGYLYKKVSIDSLSCWGVVPSEEELLKFQPSESNESADLEWLSQ 460
D ++N D + DGYLYK I + + P+ EEL +F E + DL +SQ
Sbjct: 421 -DRHFTYKNEDYI---DGYLYKSFRIQHVETKNIQPTVEELARFGSKEG--AVDLTAISQ 474
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 95/243 (39%), Gaps = 21/243 (8%)
Query: 467 KKRTTIVGKGGDKGEGSSGSSLENSFELYELVCFGRKDFGLIVGMEKDDHYKILKEGSEG 526
++ TI K S+ +S E + L+++V K+ I+ D +K++ E +
Sbjct: 573 REEVTITANNLSKSIDSTPTSSE--YSLHDIVELSAKNVACII-QAGHDIFKVIDETGK- 628
Query: 527 PAVVTVERRTL--KNGPFDMKFTALDQSMKVISLNDTARVSEGPSKDRQGIVKKIYRGIL 584
V T+ + ++ K + T +D S I + D+ + E R+G V I +
Sbjct: 629 --VSTITKGSILSKINTSRSRLTTVDSSGNEIKIGDS--IVEKIGARREGQVLYIQSQQI 684
Query: 585 FIYDENETENGGYFCSKSQHCEKTKVEACEGKGGG-SGASGFEEFPSSPKSPLSPKRSWQ 643
F+ + EN G F VEA K + + S + P +S
Sbjct: 685 FVVSKKIVENAGVFV-----VNPVNVEAIASKDNMLNNKLDLSKMNPDIISKMGPPKSSM 739
Query: 644 AREQNTEFKRGDRDGMFAVGQTLRIRVGPLKGYLCRVLAVRYSDVTVKLDSQQKILTVKG 703
R A+G+T+R+R KG L V V TV+L S+ K +T+
Sbjct: 740 PSAAPVRTGRE-----VALGKTVRVRSAGYKGQLGIVKDVNGDKATVELHSKNKHITIDK 794
Query: 704 EHL 706
L
Sbjct: 795 RKL 797
>sp|P27692|SPT5_YEAST Transcription elongation factor SPT5 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SPT5 PE=1 SV=1
Length = 1063
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 160/322 (49%), Gaps = 28/322 (8%)
Query: 177 KEEEMDEEEFDKMMEERY--KSNKLIRYAEED-YEAKKMLEREYHMPCPEDPTIWKVKCM 233
K E D + K + ERY S+K R A +D Y ++ L +P + TIW V+C
Sbjct: 239 KTSEEDAQRLAKELRERYGRSSSKQYRAAAQDGYVPQRFL-----LPSVDTATIWGVRCR 293
Query: 234 AGRERQSAFCLMQKFVDL-QSLGSK-MQIISAFAVDHIKGFIFIEADKQCDINEACKGLS 291
G+E++ L++K +L +++G K ++I+S F D+ G I+IEA KQ I + C G+
Sbjct: 294 PGKEKELIRKLLKKKFNLDRAMGKKKLKILSIFQRDNYTGRIYIEAPKQSVIEKFCNGVP 353
Query: 292 GIYYSRLAPVPKNEVSHLLSAQIKRNEVS--EGTWAYVKNGKYKGDLAQVVYVNNARKRA 349
IY S+ +P E+ LL K ++V+ EG++ +K G YKGDLA V ++
Sbjct: 354 DIYISQKLLIPVQELPLLLKPN-KSDDVALEEGSYVRIKRGIYKGDLAMVDQISENNLEV 412
Query: 350 TVKLIPRIDLQALAAKFGGGVAMKKTDSPA------PRLISPSELEEFRPLIQYRRDRDT 403
+K++PR+D + +K+ P P+L +P+ Y+RD D
Sbjct: 413 MLKIVPRLDYGKF-DEIDPTTQQRKSRRPTFAHRAPPQLFNPTMALRLDQANLYKRD-DR 470
Query: 404 GKVFENLDGMMLKDGYLYKKVSIDSLSCWGVVPSEEELLKFQPSESNESADLEWLSQLYG 463
++N D + DGYLYK I + + P+ EEL +F E + DL +SQ
Sbjct: 471 HFTYKNEDYI---DGYLYKSFRIQHVETKNIQPTVEELARFGSKEG--AVDLTSVSQ--S 523
Query: 464 ERKKKRTTIVGKGGDKGEGSSG 485
+K + + + GD+ E +G
Sbjct: 524 IKKAQAAKVTFQPGDRIEVLNG 545
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 100/245 (40%), Gaps = 24/245 (9%)
Query: 468 KRTTIVGKGGDKGEGSSGSSLENSFELYELVCFGRKDFGLIVGMEKDDHYKILKEGSEGP 527
+ TI K ++ +S E + L+++V K+ I+ D I K E
Sbjct: 621 REVTITANNLSKSIDTTATSSE--YALHDIVELSAKNVACIIQAGHD----IFKVIDETG 674
Query: 528 AVVTVERRTL--KNGPFDMKFTALDQSMKVISLNDTARVSEGPSKDRQGIVKKIYRGILF 585
V T+ + ++ K + +++D + I + DT + E R+G V I +F
Sbjct: 675 KVSTITKGSILSKINTARARVSSVDANGNEIKIGDT--IVEKVGSRREGQVLYIQTQQIF 732
Query: 586 IYDENETENGGYFCSKSQHCEKTKVEACEGKGGG-SGASGFEEFPSSPKSPLSPK--RSW 642
+ + EN G F + VEA K S + S + P +++
Sbjct: 733 VVSKKIVENAGVFV-----VNPSNVEAVASKDNMLSNKMDLSKMNPEIISKMGPPSSKTF 787
Query: 643 QAREQNTEFKRGDRDGMFAVGQTLRIRVGPLKGYLCRVLAVRYSDVTVKLDSQQKILTVK 702
Q Q+ RG R+ A+G+T+RIR KG L V V TV+L S+ K +T+
Sbjct: 788 QQPIQS----RGGRE--VALGKTVRIRSAGYKGQLGIVKDVNGDKATVELHSKNKHITID 841
Query: 703 GEHLA 707
L
Sbjct: 842 KHKLT 846
>sp|Q2UGU3|SPT5_ASPOR Transcription elongation factor spt5 OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=spt5 PE=3 SV=1
Length = 1026
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 183/383 (47%), Gaps = 56/383 (14%)
Query: 105 KPHNRKRKNRSVLQFVEDAADVDYDDDDEEEVGNESDNSGGFADDDFMEEL---FDAQPK 161
+P R+RK V F E+ A VD D+D+ E+ +E GG D M+ L + +
Sbjct: 98 RPKKRRRKG-GVAHFFEEEAGVDEDEDEAEDEEDEMAELGGEMHPDDMDALPVGAETDDR 156
Query: 162 VNNEMGQAHNLPFIPKEEEMDEEEFDKMMEERYKSNKLIRYAEEDYEAKKMLEREYHMPC 221
+ ++ + L E MD E+ ++++ERY N R A D ++ + +P
Sbjct: 157 RHRQLDRQREL-----EASMDAEKQAQLLKERYGRN---RAAASD---AVVVPKRLLLPS 205
Query: 222 PEDPTIWKVKCMAGRERQSAFCLMQKFVDLQSLGSK--MQIISAFAVD-HIKGFIFIEAD 278
EDP+IW V+C G+ER+ F + QK ++ + +GS+ M+IISAF + G+I++EA
Sbjct: 206 VEDPSIWGVRCKPGKEREVIFAI-QKRIEERPMGSRNPMKIISAFERGGAMSGYIYVEAR 264
Query: 279 KQCDINEACKGLSGIY-YSRLAPVPKNEVSHLLSAQIKRNEVSEGTWAYVKNGKYKGDLA 337
+Q D+ +A + +S +Y +++ VP E+ LL Q K E+ G W +K GKY+ DLA
Sbjct: 265 RQADVMDALQDMSNVYPRTKMILVPVREMPDLLRVQ-KSEELLPGGWVRIKRGKYQNDLA 323
Query: 338 QVVYVNNARKRATVKLIPRIDL---QALAAKF--------GGGVAMKKTDSPAPRLISPS 386
Q+ V TV+L+PR+D + + A F G A+ + P RL S +
Sbjct: 324 QIEEVETNGLAVTVRLVPRLDYGMNEDIGAPFMDPKRKRPGMNPAVAR---PPQRLFSEA 380
Query: 387 ELEEFRPLIQYRRDRDTGKVFENLDGM----------MLKDGYLYKKVSIDSLSCWGVVP 436
E + + GK G+ DG+L K + + L V P
Sbjct: 381 EAK-----------KKHGKYLSATSGLGGKSWSYLGETYVDGFLIKDMKVQHLITKNVSP 429
Query: 437 SEEELLKFQPSESNESADLEWLS 459
EE+ F + +A+L+ S
Sbjct: 430 RLEEVTMFARGSEDGTANLDLAS 452
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 48/231 (20%)
Query: 492 FELYELVCFGRKDFGLIVGMEKDDHYKILKEGSEGPAVVTVERRTLKNGPFDMK-FTALD 550
F++++LV IV ++++ + + GS + T+ + N + A D
Sbjct: 581 FDVHDLVQLDAATVACIVKVDRESLRVLDQNGS----IRTILPTQVTNKITPRRDAVATD 636
Query: 551 QSMKVISLNDTARVSEGPSKDRQGIVKKIYRGILFIYDENETENGGYFCS---------- 600
++ I DT R G + R G++ I+R LF++++ + EN G
Sbjct: 637 RNGAEIRHGDTVREVYG--EQRNGVILHIHRSFLFLHNKAQAENSGITVVRTTNVVTVSA 694
Query: 601 ---KSQHCEKTKV-EACEGKGGGSGASGFEEFPSSPKSPLSPKRSWQAREQNTEFKRGDR 656
+S + TK+ A +GG SG G P +S+ R
Sbjct: 695 KGGRSTGPDLTKMNPALMSRGGPSGMMG-------------PPKSF------------GR 729
Query: 657 DGMFAVGQTLRIRVGPLKGYLCRVLAVRYSDVTVKLDSQQKILTVKGEHLA 707
D M +G+T+ +R GP KG + V V+L S+ K++++ E L
Sbjct: 730 DRM--IGKTVMVRKGPFKGLVGIVKDAGDVQARVELHSKNKLVSIPKELLV 778
>sp|Q9DDT5|SPT5H_DANRE Transcription elongation factor SPT5 OS=Danio rerio GN=supt5h PE=1
SV=1
Length = 1084
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 142/283 (50%), Gaps = 32/283 (11%)
Query: 219 MPCPEDPTIWKVKCMAGRERQSAFCLMQKFVDLQSLGSKMQIISAFAVDHIKGFIFIEAD 278
+P +DP +W VKC G ER +A LM+KFV Q + +QI S A +H+KG+I++EA
Sbjct: 170 LPGVKDPNLWTVKCKIGEERATAISLMRKFVAYQCTDTPLQIKSVVAPEHVKGYIYVEAY 229
Query: 279 KQCDINEACKGL----SGIYYSRLAPVPKNEVSHLLSAQIKRNEVSEGTWAYVKNGKYKG 334
KQ + A +G+ G + ++ P+ E++ +L + + +W +K G YK
Sbjct: 230 KQTHVKAAIEGVGNLRMGFWNQQMVPI--KEMTDVLKVVKEVTNLKPKSWVRLKRGLYKD 287
Query: 335 DLAQVVYVNNARKRATVKLIPRIDLQALAAKFGGG---VAMKKTDSPAPRLISPSELEEF 391
D+AQV YV ++ ++K+IPRIDL + A+ KK P RL + E+
Sbjct: 288 DIAQVDYVEPSQNTISLKMIPRIDLDRIKARMSMKDWFAKRKKFKRPPQRLF---DAEKI 344
Query: 392 RPLIQYRRDRDTGKVFENLDGMML------KDGYLYKKVSIDSLSCWGVVPSEEELLKFQ 445
R L G+V + D M+ + G+L+K ++ ++ GV P+ EL KF+
Sbjct: 345 RSL--------GGEVSHDGDFMIFEANRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFE 396
Query: 446 PSESNESADLEWLSQLYGERKKKRTTIVGKGGDKGEGSSGSSL 488
+ E DLE +++ G+ ++ + GD E G +
Sbjct: 397 --DQPEGIDLEVVTETTGKEREHNL----QAGDNVEVCEGELI 433
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 102/235 (43%), Gaps = 35/235 (14%)
Query: 496 ELVCFGRKDFGLIVGMEKDDHYKILKEGSEGPAVVTVERRTLKNGPFDMKF-TALDQSMK 554
ELV + G+IV +E++ +++L + V+TV + + N D +F ALD
Sbjct: 537 ELVQLDPQTVGVIVRLERET-FQVLNMHGK---VLTVRHQAV-NRRKDNRFAVALDSEQN 591
Query: 555 VISLNDTARVSEGPSKDRQGIVKKIYRGILFIYDENETENGGYFCSKSQHCEKTKVEACE 614
I + D +V +GP R+G ++ I+RG F++ + ENGG F K++H
Sbjct: 592 NIHVKDIVKVIDGPHSGREGEIRHIFRGFAFLHCKKLVENGGMFVCKARHL--------- 642
Query: 615 GKGGGSGASGFEEFPSSPKSPLSPKRSWQAR-----------------EQNTEFKRGDRD 657
GGS F +P+SP+ S R D D
Sbjct: 643 VLAGGSKPRDVTNFTVGGFAPMSPRISSPMHPGGGGQPQRGGGGGGGGGMGRGRGRRDND 702
Query: 658 GMFAVGQTLRIRVGPLKGYLCRVLAVRYSDVTVKLDSQQKILTVKGEHLAEVRGK 712
+GQT+RI GP KGY+ V S V+L S + ++V + L V GK
Sbjct: 703 ---LIGQTVRISQGPYKGYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGGK 754
>sp|Q4WP96|SPT5_ASPFU Transcription elongation factor spt5 OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=spt5 PE=3 SV=1
Length = 1058
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 141/290 (48%), Gaps = 43/290 (14%)
Query: 178 EEEMDEEEFDKMMEERYKSNKLIRYAEEDYEAKKMLEREYHMPCPEDPTIWKVKCMAGRE 237
E MD E+ ++++ERY N R A D ++ + +P +DP+IW V+C AG+E
Sbjct: 200 EASMDAEKQAQLLKERYGRN---RAAATD---AVVVPKRLLLPSVDDPSIWGVRCKAGKE 253
Query: 238 RQSAFCLMQKFVDLQSLGSK--MQIISAFAVD-HIKGFIFIEADKQCDINEACKGLSGIY 294
R+ F + QK ++ + GS+ ++IISAF + G+I++EA +Q D+ EA + +S +Y
Sbjct: 254 REVVFAI-QKRIEERPPGSRKPIRIISAFERGGAMSGYIYVEARRQADVMEALEDMSNVY 312
Query: 295 -YSRLAPVPKNEVSHLLSAQIKRNEVSEGTWAYVKNGKYKGDLAQVVYVNNARKRATVKL 353
+++ VP E+ LL Q K E++ G W +K GKY+GDLAQ+ V+ TV+L
Sbjct: 313 PRTKMILVPVREMPDLLRVQ-KSEELNPGGWVRIKRGKYQGDLAQIEEVDTNGLDVTVRL 371
Query: 354 IPRIDLQALAAKFGGGVAMKKT---------DSPAPRLISPSELEEFRPLIQYRRDRDTG 404
+PR+D L G V K P RL S +E + + G
Sbjct: 372 VPRLDY-GLNEDSGAPVVDIKRKRPGMASGGPRPPQRLFSEAEAK-----------KRHG 419
Query: 405 KVFENLDGM----------MLKDGYLYKKVSIDSLSCWGVVPSEEELLKF 444
K G+ DG+L K + + L V P EE+ F
Sbjct: 420 KYLSATSGLGGKSWSYLGETYIDGFLIKDMKVQHLITKNVNPRLEEVTMF 469
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 94/229 (41%), Gaps = 46/229 (20%)
Query: 492 FELYELVCFGRKDFGLIVGMEKDDHYKILKEGSEGPAVVTVERRTLKNGPFDMK-FTALD 550
F++++LV +V ++++ + + GS + TV + N + A D
Sbjct: 613 FDVHDLVQLDASTVACVVKVDRESLRVLDQNGS----IRTVLPSQIANKITPRRDAVATD 668
Query: 551 QSMKVISLNDTARVSEGPSKDRQGIVKKIYRGILFIYDENETENGGYFCS---------- 600
++ I + DT R G R G++ IYR LF++++ + EN G
Sbjct: 669 RNGAEIRIGDTVRELYG--DQRSGVILHIYRSFLFLHNKAQAENSGIVVVRTTNVVTVSA 726
Query: 601 ---KSQHCEKTKVEACEGKGGGSGASGFEEFPSSPKSPLSPKRSWQAREQNTEFKRGDRD 657
+S + TK+ + G GAS + P +S+ DR
Sbjct: 727 KGGRSTGPDLTKMNPALMRSGIPGAS------------MGPPKSFG----------HDR- 763
Query: 658 GMFAVGQTLRIRVGPLKGYLCRVLAVRYSDVTVKLDSQQKILTVKGEHL 706
+G+T+++R GP KG + V V+L S+ K++T+ + L
Sbjct: 764 ---LIGKTVQVRKGPYKGLVGIVKDSTDVQARVELHSRNKLVTIPKDVL 809
>sp|Q5ZI08|SPT5H_CHICK Transcription elongation factor SPT5 OS=Gallus gallus GN=SUPT5H
PE=2 SV=1
Length = 1079
Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 137/261 (52%), Gaps = 26/261 (9%)
Query: 219 MPCPEDPTIWKVKCMAGRERQSAFCLMQKFVDLQSLGSKMQIISAFAVDHIKGFIFIEAD 278
+P +DP +W VKC G ER +A LM+KF+ Q + +QI S A +H+KG+I++EA
Sbjct: 168 LPGVKDPNLWTVKCKIGEERATAIALMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAY 227
Query: 279 KQCDINEACKGLSGI---YYSRLAPVPKNEVSHLLSAQIKRNEVSEGTWAYVKNGKYKGD 335
KQ + +A +G+ + Y+++ VP E++ +L + + +W +K G YK D
Sbjct: 228 KQTHVKQAIEGVGNLRMGYWNQQM-VPIKEMTDVLKVVKEVTNLKPKSWVRLKRGIYKDD 286
Query: 336 LAQVVYVNNARKRATVKLIPRIDLQALAAKFGGG---VAMKKTDSPAPRLISPSELEEFR 392
+AQV YV ++ + ++K+IPRID + A+ KK P RL + E+ R
Sbjct: 287 IAQVDYVEPSQNQISLKMIPRIDFDRIKARMSLKDWFAKRKKFKRPPQRLF---DAEKIR 343
Query: 393 PLIQYRRDRDTGKVFENLDGMML------KDGYLYKKVSIDSLSCWGVVPSEEELLKFQP 446
L G V + D ++ + G+L+K ++ ++ GV P+ EL KF+
Sbjct: 344 SL--------GGDVASDGDFLIFEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFE- 394
Query: 447 SESNESADLEWLSQLYGERKK 467
+ E DLE +++ G+ ++
Sbjct: 395 -DQPEGIDLEVVTESTGKERE 414
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 31/228 (13%)
Query: 496 ELVCFGRKDFGLIVGMEKDDHYKILKEGSEGPAVVTVERRTLKNGPFDMKF-TALDQSMK 554
ELV + G+IV +E++ +++L + VVTV + + D +F ALD
Sbjct: 535 ELVQLDPQTVGVIVRLERET-FQVLNMYGK---VVTVRHQAVTRKK-DNRFAVALDSEQN 589
Query: 555 VISLNDTARVSEGPSKDRQGIVKKIYRGILFIYDENETENGGYFCSKSQHCEKTKVEACE 614
I + D +V +GP R+G ++ ++RG F++ + ENGG F K++H
Sbjct: 590 NIHVKDIVKVIDGPHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTRHL--------- 640
Query: 615 GKGGGSGASGFEEF------PSSPK--SPLSP-----KRSWQAREQNTEFKRGDRDGMFA 661
GGS F P SP+ SP+ P + + + R D D
Sbjct: 641 VLAGGSKPRDVTNFTVGSFAPMSPRISSPMHPSGAGQRGGFGGGGMSRGRGRRDND---L 697
Query: 662 VGQTLRIRVGPLKGYLCRVLAVRYSDVTVKLDSQQKILTVKGEHLAEV 709
+GQT+RI GP KGY+ V S V+L S + ++V + L V
Sbjct: 698 IGQTVRISQGPYKGYIGVVKDATESTARVELHSTCQTISVDRQRLTTV 745
>sp|Q21338|SPT5H_CAEEL Transcription elongation factor SPT5 OS=Caenorhabditis elegans
GN=spt-5 PE=3 SV=3
Length = 1208
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 140/293 (47%), Gaps = 24/293 (8%)
Query: 177 KEEEMDEEEFDKMMEERYKSNK-LIRYAEEDYEAKKMLEREYHMPCPEDPTIWKVKCMAG 235
K + M E+E K E +YK +K +Y +ED A + + H+P +DP +W VKC G
Sbjct: 135 KFQNMTEDEVQKYFENKYKGDKNDSQYDDED-SAMDDISKNSHLPSTKDPNLWIVKCRMG 193
Query: 236 RERQSAFCLMQKFVDLQSLGSKMQIISAFAVDHIKGFIFIEADKQCDINEACKGLSGIYY 295
E+ A LM+K + ++ QI S + +KG I+IEA KQ + A +G S +
Sbjct: 194 EEKLVAMHLMRKCLAVEHTNEPFQIKSVVVKEGLKGMIYIEAFKQSHVMSAIEGFSALNQ 253
Query: 296 SRLAPVPKNEVSHLLSAQIKRNEVSEGTWAYVKNGKYKGDLAQVVYVNNARKRATVKLIP 355
+ VP ++ +L ++ G++ +K YK DLA V V+ A+ R +KLIP
Sbjct: 254 FTITMVPIKDMVDVLRVVKDIPQLKLGSYVRLKRTMYKDDLAVVDLVDIAQNRVNLKLIP 313
Query: 356 RIDLQ----ALAAKFGGGVAMKKTDSPAPRLISPSELEEFRPLIQYRRDRDTGKV----- 406
R+D Q A+ +K+ P P+L ++E G++
Sbjct: 314 RVDYQKRRGAMRTDADKNYKLKR--RPMPKLFDQDTIKEV-----------GGEIVTDGD 360
Query: 407 FENLDGMMLKDGYLYKKVSIDSLSCWGVVPSEEELLKFQPSESNESADLEWLS 459
F +G + G+LYK I+++ GV P+ EL KFQ S + +LE S
Sbjct: 361 FLVFEGNHFRRGFLYKYFPINAIQADGVKPTLGELEKFQESSDDLKRELETAS 413
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 96/246 (39%), Gaps = 45/246 (18%)
Query: 492 FELYELVCFGRK-DFGLIVGMEKDDHYKILKE----GSEGPAVVTVERRTLKNGPFDMKF 546
F+ ++LV + G+IV +EK+ H ++L P + ++ D++F
Sbjct: 535 FQYHDLVQLDHTGNVGVIVRLEKE-HLEVLNMHGVVNRIKPQAIIAKK--------DVRF 585
Query: 547 T-ALDQSMKVISLNDTARVSEGP-SKDRQ------GIVKKIYRGILFIYDENETENGGYF 598
LD I D +V GP +K+R+ G V +RG +F+Y T+NGG
Sbjct: 586 AKVLDSQNNSIEAKDLVKVIGGPNAKERETDEDPVGEVLYAFRGTVFVYSRKVTKNGGVL 645
Query: 599 CSKSQHC-----EKTKVEACEGKGGGSGASGFEEFPSSPKSPLSPKRSWQAREQNTEF-- 651
K + +KT + S +P SP+ +R +
Sbjct: 646 VCKPKQLILQGAKKTTSTPMVSRMASPNPMASPRHSSGGMTPRSPQDGMSSRGSSGGQTP 705
Query: 652 ----------------KRGDRDGMFAVGQTLRIRVGPLKGYLCRVLAVRYSDVTVKLDSQ 695
++ R + +G+ +RI GP+KG+ V V V+L +Q
Sbjct: 706 RQGGGGGRGGHFGTANQQKVRRDLTLIGKNVRIIKGPMKGHFGIVRDATEDTVRVELHTQ 765
Query: 696 QKILTV 701
+ ++V
Sbjct: 766 CRTISV 771
>sp|O55201|SPT5H_MOUSE Transcription elongation factor SPT5 OS=Mus musculus GN=Supt5h PE=1
SV=1
Length = 1082
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 136/261 (52%), Gaps = 26/261 (9%)
Query: 219 MPCPEDPTIWKVKCMAGRERQSAFCLMQKFVDLQSLGSKMQIISAFAVDHIKGFIFIEAD 278
+P +DP +W VKC G ER +A LM+KF+ Q + +QI S A +H+KG+I++EA
Sbjct: 169 LPGVKDPNLWTVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAY 228
Query: 279 KQCDINEACKGLSGI---YYSRLAPVPKNEVSHLLSAQIKRNEVSEGTWAYVKNGKYKGD 335
KQ + +A +G+ + Y+++ VP E++ +L + + +W +K G YK D
Sbjct: 229 KQTHVKQAIEGVGNLRLGYWNQQM-VPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDD 287
Query: 336 LAQVVYVNNARKRATVKLIPRIDLQALAAKFGGG---VAMKKTDSPAPRLISPSELEEFR 392
+AQV YV ++ ++K+IPRID + A+ KK P RL + E+ R
Sbjct: 288 IAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLF---DAEKIR 344
Query: 393 PLIQYRRDRDTGKVFENLDGMML------KDGYLYKKVSIDSLSCWGVVPSEEELLKFQP 446
L G V + D ++ + G+L+K ++ ++ GV P+ EL KF+
Sbjct: 345 SL--------GGDVASDGDFLIFEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFE- 395
Query: 447 SESNESADLEWLSQLYGERKK 467
+ E DLE +++ G+ ++
Sbjct: 396 -DQPEGIDLEVVTESTGKERE 415
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 100/229 (43%), Gaps = 32/229 (13%)
Query: 496 ELVCFGRKDFGLIVGMEKDDHYKILKEGSEGPAVVTVERRTLKNGPFDMKF-TALDQSMK 554
ELV + G+IV +E++ +++L + VVTV + + D +F ALD
Sbjct: 536 ELVQLDPRTVGVIVRLERET-FQVLNMHGK---VVTVRHQAVTQKK-DNRFAVALDSDQN 590
Query: 555 VISLNDTARVSEGPSKDRQGIVKKIYRGILFIYDENETENGGYFCSKSQHCEKTKVEACE 614
I + D +V +GP R+G ++ +YR F++ + ENGG F K++H
Sbjct: 591 NIHVKDIVKVIDGPHSGREGEIRHLYRSFAFLHCKKLVENGGMFVCKARHL--------- 641
Query: 615 GKGGGSGASGFEEF------PSSPK--SPLSPKRSWQ------AREQNTEFKRGDRDGMF 660
GGS P SP+ SP+ P Q + R D +
Sbjct: 642 VLAGGSKPRDVTNLTVGGFTPMSPRISSPMHPSAEGQHGGFGSPGGMSRGRGRRDNE--- 698
Query: 661 AVGQTLRIRVGPLKGYLCRVLAVRYSDVTVKLDSQQKILTVKGEHLAEV 709
+GQT+RI GP KGY+ V S V+L S + ++V + L V
Sbjct: 699 LIGQTVRISQGPYKGYIGVVKDATESTARVELHSTCQTISVDRQRLTTV 747
>sp|Q5R405|SPT5H_PONAB Transcription elongation factor SPT5 OS=Pongo abelii GN=SUPT5H PE=2
SV=1
Length = 1083
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 132/254 (51%), Gaps = 26/254 (10%)
Query: 219 MPCPEDPTIWKVKCMAGRERQSAFCLMQKFVDLQSLGSKMQIISAFAVDHIKGFIFIEAD 278
+P +DP +W VKC G ER +A LM+KF+ Q + +QI S A +H+KG+I++EA
Sbjct: 167 LPGVKDPNLWTVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAY 226
Query: 279 KQCDINEACKGLSGI---YYSRLAPVPKNEVSHLLSAQIKRNEVSEGTWAYVKNGKYKGD 335
KQ + +A +G+ + Y+++ VP E++ +L + + +W +K G YK D
Sbjct: 227 KQTHVKQAIEGVGNLRLGYWNQQM-VPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDD 285
Query: 336 LAQVVYVNNARKRATVKLIPRIDLQALAAKFGGG---VAMKKTDSPAPRLISPSELEEFR 392
+AQV YV ++ ++K+IPRID + A+ KK P RL + E+ R
Sbjct: 286 IAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLF---DAEKIR 342
Query: 393 PLIQYRRDRDTGKVFENLDGMML------KDGYLYKKVSIDSLSCWGVVPSEEELLKFQP 446
L G V + D ++ + G+L+K ++ ++ GV P+ EL KF+
Sbjct: 343 SL--------GGDVASDGDFLIFEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFE- 393
Query: 447 SESNESADLEWLSQ 460
+ E DLE +++
Sbjct: 394 -DQPEGIDLEVVTE 406
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 30/230 (13%)
Query: 496 ELVCFGRKDFGLIVGMEKDDHYKILKEGSEGPAVVTVERRTLKNGPFDMKF-TALDQSMK 554
ELV + G+IV +E++ +++L + VVTV + + D +F ALD
Sbjct: 534 ELVQLDPQTVGVIVRLERET-FQVLNMYGK---VVTVRHQAVTRKK-DNRFAVALDSEQN 588
Query: 555 VISLNDTARVSEGPSKDRQGIVKKIYRGILFIYDENETENGGYFCSKSQHCEKTKVEACE 614
I + D +V +GP R+G ++ ++R F++ + ENGG F K++H
Sbjct: 589 NIHVKDIVKVIDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHL--------- 639
Query: 615 GKGGGSGASGFEEF------PSSPK--SPLSPKRSWQAREQNTEFKRGDRDGMF------ 660
GGS F P SP+ SP+ P Q +
Sbjct: 640 VLAGGSKPRDVTNFTVGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDN 699
Query: 661 -AVGQTLRIRVGPLKGYLCRVLAVRYSDVTVKLDSQQKILTVKGEHLAEV 709
+GQT+RI GP KGY+ V S V+L S + ++V + L V
Sbjct: 700 ELIGQTVRISQGPYKGYIGVVKDATESTARVELHSTCQTISVDRQRLTTV 749
>sp|O00267|SPT5H_HUMAN Transcription elongation factor SPT5 OS=Homo sapiens GN=SUPT5H PE=1
SV=1
Length = 1087
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 134/263 (50%), Gaps = 30/263 (11%)
Query: 219 MPCPEDPTIWKVKCMAGRERQSAFCLMQKFVDLQSLGSKMQIISAFAVDHIKGFIFIEAD 278
+P +DP +W VKC G ER +A LM+KF+ Q + +QI S A +H+KG+I++EA
Sbjct: 171 LPGVKDPNLWTVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAY 230
Query: 279 KQCDINEACKGLSGIYYSRL-----APVPKNEVSHLLSAQIKRNEVSEGTWAYVKNGKYK 333
KQ + +A +G+ + RL VP E++ +L + + +W +K G YK
Sbjct: 231 KQTHVKQAIEGVGNL---RLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYK 287
Query: 334 GDLAQVVYVNNARKRATVKLIPRIDLQALAAKFGGG---VAMKKTDSPAPRLISPSELEE 390
D+AQV YV ++ ++K+IPRID + A+ KK P RL + E+
Sbjct: 288 DDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLF---DAEK 344
Query: 391 FRPLIQYRRDRDTGKVFENLDGMML------KDGYLYKKVSIDSLSCWGVVPSEEELLKF 444
R L G V + D ++ + G+L+K ++ ++ GV P+ EL KF
Sbjct: 345 IRSL--------GGDVASDGDFLIFEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKF 396
Query: 445 QPSESNESADLEWLSQLYGERKK 467
+ + E DLE +++ G+ ++
Sbjct: 397 E--DQPEGIDLEVVTESTGKERE 417
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 30/230 (13%)
Query: 496 ELVCFGRKDFGLIVGMEKDDHYKILKEGSEGPAVVTVERRTLKNGPFDMKF-TALDQSMK 554
ELV + G+IV +E++ +++L + VVTV + + D +F ALD
Sbjct: 538 ELVQLDPQTVGVIVRLERET-FQVLNMYGK---VVTVRHQAVTRKK-DNRFAVALDSEQN 592
Query: 555 VISLNDTARVSEGPSKDRQGIVKKIYRGILFIYDENETENGGYFCSKSQHCEKTKVEACE 614
I + D +V +GP R+G ++ ++R F++ + ENGG F K++H
Sbjct: 593 NIHVKDIVKVIDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHL--------- 643
Query: 615 GKGGGSGASGFEEF------PSSPK--SPLSPKRSWQAREQNTEFKRGDRDGMF------ 660
GGS F P SP+ SP+ P Q +
Sbjct: 644 VLAGGSKPRDVTNFTVGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDN 703
Query: 661 -AVGQTLRIRVGPLKGYLCRVLAVRYSDVTVKLDSQQKILTVKGEHLAEV 709
+GQT+RI GP KGY+ V S V+L S + ++V + L V
Sbjct: 704 ELIGQTVRISQGPYKGYIGVVKDATESTARVELHSTCQTISVDRQRLTTV 753
>sp|Q6CC84|SPT5_YARLI Transcription elongation factor SPT5 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=SPT5 PE=3 SV=1
Length = 980
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 128/275 (46%), Gaps = 9/275 (3%)
Query: 212 MLEREYHMPCPEDPTIWKVKCMAGRERQSAFCLMQKFVDLQSLGSKMQIISAFAVDHIKG 271
++ + +P +P+IW ++C G+E++ ++K + LQ + ++I+S F D G
Sbjct: 164 VIPQHLLLPSVNEPSIWGIRCKPGKEKELVRQCLRKKLSLQKSRNPLEIMSVFQRDTFTG 223
Query: 272 FIFIEADKQCDINEACKGLSGIYYSRLAPVPKNEVSHLLSA-QIKRNEVSEGTWAYVKNG 330
+I++EA Q + A KGL +Y + VP E LL A + E+ G + +K G
Sbjct: 224 YIYMEARNQQAVTVALKGLVNVYPQNMILVPIKEYVDLLRATKSAETELVPGAYVRLKRG 283
Query: 331 KYKGDLAQVVYVNNARKRATVKLIPRIDLQALAAKFGGGVAMKKTDSPAPRLISPSELEE 390
KY GDLA V ++ +KL+PR+D A G + P PRL S E +
Sbjct: 284 KYGGDLAIVENLSENGLEVRLKLVPRLDYGRNAEAGIDGKRKRVARIPPPRLFSEQEASQ 343
Query: 391 FRPLIQYRRDRDTGKVFENLDGMMLKDGYLYKKVSIDSLSCWGVVPSEEELLKFQPSESN 450
+ P R + G G G+LYK I ++ V P EEL +F SE
Sbjct: 344 YDP----RNLQKRGPNAYVYAGDEYIGGFLYKDFKITLVNAENVAPKLEELTRFN-SEET 398
Query: 451 ESADLEWLSQLYGERKKKRTTIVGKGGDKGEGSSG 485
+ DL L+Q +K + +GGD E S G
Sbjct: 399 DGIDLASLAQ---SLRKSAAAVQFQGGDVVEVSEG 430
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 21/148 (14%)
Query: 461 LYGERKKKRTTIVGKGGDKGEGSSGSSLENSFELYELVCFGRKDFGLIVGMEKDDHYKIL 520
L + KK T+ K K GS +EL++ V G IV +E+D +
Sbjct: 502 LLSDLNKKEVTVFAKDLKKVSDIGGSHQVGDYELHDFVQLDALHVGCIVKVERDSLKVLD 561
Query: 521 KEGSEGPAVVTVERRTLKNGPFDMKFT------ALDQSMKVISLNDTARVSEGPSKDRQG 574
+EG+ R++ MK T A D + I + DT R + G + RQG
Sbjct: 562 QEGTV---------RSVTPSSITMKLTRNMEGLATDSNGSEIKIGDTVRETVG--EGRQG 610
Query: 575 IVKKIYRGILFIYDENETENGGYFCSKS 602
V IY+ LF+ + + G F +K+
Sbjct: 611 AVLHIYKNTLFL----SSRSLGVFVAKA 634
>sp|Q5BCN2|SPT5_EMENI Transcription elongation factor spt5 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=spt5 PE=3 SV=1
Length = 1016
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 143/295 (48%), Gaps = 29/295 (9%)
Query: 181 MDEEEFDKMMEERYKSNKLIRYAEEDYEAKKMLEREYHMPCPEDPTIWKVKCMAGRERQS 240
+D E+ ++++ERY N R A D ++ + +P +DP+IW V+C AG+ER+
Sbjct: 162 LDAEKQAQLLKERYGRN---RAAATD---AVIVPKRLLLPSVDDPSIWGVRCKAGKEREV 215
Query: 241 AFCLMQKFVDLQSLGSK--MQIISAFAVD-HIKGFIFIEADKQCDINEACKGLSGIY-YS 296
F + QK ++ + GS+ ++IISAF + G+I++EA +Q D+ +A + +S +Y +
Sbjct: 216 VFSI-QKRIEDRPPGSRNPIKIISAFERGGAMSGYIYVEARRQADVMDALQDMSNVYPRT 274
Query: 297 RLAPVPKNEVSHLLSAQIKRNEVSEGTWAYVKNGKYKGDLAQVVYVNNARKRATVKLIPR 356
++ VP E+ LL Q K E++ G W +K GKY DLAQ+ V TV+L+PR
Sbjct: 275 KMILVPVKEMPDLLRVQ-KSEELNPGGWVRIKRGKYMNDLAQIEEVETNGLAVTVRLVPR 333
Query: 357 IDLQALAAKFGGGVAMKKTDSPA--PRLISPSELEEFRPLIQYRRDRDTGKVFE------ 408
+D + G + K P P + P + R + + K
Sbjct: 334 LDY-GMNEDSGAPIMDPKRKRPGANPAVARPPQ----RLFSEAEAKKKHSKYLTATAGLG 388
Query: 409 ----NLDGMMLKDGYLYKKVSIDSLSCWGVVPSEEELLKFQPSESNESADLEWLS 459
N G DG+L K + + L V P EE+ F N +++L+ S
Sbjct: 389 AKSWNYLGETYIDGFLIKDMKVQHLITKNVNPRLEEVTMFARDSENGTSNLDLAS 443
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 106/274 (38%), Gaps = 43/274 (15%)
Query: 492 FELYELVCFGRKDFGLIVGMEKDDHYKILKEGSEGPAVVTVERRTLKNGPFDMKFT---- 547
F++++LV IV ++++ + + GS RT+ K T
Sbjct: 572 FDVHDLVQLDAATVACIVKVDRESLRVLDQNGSI---------RTILPSQVTNKITPRRD 622
Query: 548 --ALDQSMKVISLNDTARVSEGPSKDRQGIVKKIYRGILFIYDENETENGGYFCSKSQHC 605
A D++ I DT R G + R G++ I+R LFI+++ + EN G ++ +
Sbjct: 623 AVATDRNGAEIRHGDTVREVYG--EQRSGVILHIHRSFLFIHNKAQAENAGIVVVRTTNV 680
Query: 606 EKTKVEACEGKGGGSGASGFEEF-PS-----SPKSPLSPKRSWQAREQNTEFKRGDRDGM 659
KGG + P+ +P ++P S K RD +
Sbjct: 681 VT-----VSAKGGRPTGPDLSKMNPALMRNGAPGGMMAPPPS----------KTFGRDRL 725
Query: 660 FAVGQTLRIRVGPLKGYLCRVLAVRYSDVTVKLDSQQKILTVKGEHLAEVRGKSFITSTS 719
G+T+ ++ GP KG L V V+L S+ K++T+ E L K +T +
Sbjct: 726 L--GKTVLVKKGPFKGLLGIVKDTTDVQARVELHSKNKLVTIPKELLVV---KDPVTGQT 780
Query: 720 DDQGSASFKPFDPLGAGGGSGDWMSAATTSAEGD 753
D G P P + S W T A D
Sbjct: 781 IDIGRGRGGPRVPQNSAAPSSGWQGGRTPMAAAD 814
>sp|Q6CWW9|SPT5_KLULA Transcription elongation factor SPT5 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=SPT5 PE=3 SV=1
Length = 1036
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 193/444 (43%), Gaps = 87/444 (19%)
Query: 129 DDDDEEEVGNESDNSGGFADDDFMEELFDAQPKVNNEMGQAHNLPFIPKEEEMDEEEFDK 188
D++DEE+ GG DD EL NL ++ +E+ K
Sbjct: 172 DEEDEED-------RGGRVDDRLHREL-------------DQNL------QKTADEDMHK 205
Query: 189 MMEERYKSNKLIRY---AEEDYEAKK---MLEREYHMPCPEDPTIWKVKCMAGRERQSAF 242
+ E+ K RY + +DY + + + + +P + IW V+C G+E++
Sbjct: 206 IAEDFKK-----RYGRDSSKDYRVQTQGGYVPQRFMLPSVDTAIIWSVRCRPGKEKELVR 260
Query: 243 CLMQKFVDL-QSLGSK-MQIISAFAVDHIKGFIFIEADKQCDINEACKGLSGIYYSRLAP 300
L+ K +L +S+GSK ++I+S F D+ G I+IEA KQ I + G+ +Y ++
Sbjct: 261 KLLNKKFNLDKSMGSKKLKILSIFQRDNYTGRIYIEAPKQSVIEKFVNGVPDVYSNQKLL 320
Query: 301 VPKNEVSHLLSAQIKRNEVS--EGTWAYVKNGKYKGDLAQVVYVNNARKRATVKLIPRID 358
+P E+ LL K +EV G++ +K G YK DLA + ++ A +K++PR+D
Sbjct: 321 IPVQELPLLLKPT-KSDEVRLDVGSYVRIKRGIYKNDLAVIDQISQNNLEALLKIVPRLD 379
Query: 359 L-------------QALAAKFGGGVAMKKTDSPAPRLISPSELEEFRPLIQYRRDRDTGK 405
+A A F P P+L +P+ ++RD D
Sbjct: 380 YGKNDEIDPDTNQRKAKRATFAS--------RPPPQLFNPTMALRLDQANLFKRD-DRHF 430
Query: 406 VFENLDGMMLKDGYLYKKVSIDSLSCWGVVPSEEELLKFQPSESNESADLEWLSQLYGER 465
+ D + DGYL+K I L + P+ EEL +F E + DL ++Q +
Sbjct: 431 TYRKEDYV---DGYLFKSFKIQYLDTKNIQPTVEELSRFGSKEGD--VDLAAIAQTM--K 483
Query: 466 KKKRTTIVGKGGDKGE-------GSSGSSLENSFELYELVCFGRKDFGL---IVGMEKD- 514
K + + + + GD+ E GS G +S ++ + G D L I + K
Sbjct: 484 KAQASKAMFQPGDRVEVLTGEQRGSRGVVTRSSKDVISVKLSGFSDKSLEFPIASLRKIF 543
Query: 515 ---DHYKILKEGSEGPA--VVTVE 533
DH ++ EG A V+ V+
Sbjct: 544 ELGDHVTVIAGEHEGNAGLVLLVQ 567
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 107/263 (40%), Gaps = 29/263 (11%)
Query: 453 ADLEWLSQ-----LYGERKKKRTTIVGKGGDKGEGSSGSSLENSFELYELVCFGRKDFGL 507
A L L Q ++ ++ TI K S+ +S E + L+++V K+
Sbjct: 560 AGLVLLVQNGQVTFVSDQTRENLTISANNLSKSMDSTPTSSE--YALHDIVELSAKNVAC 617
Query: 508 IVGMEKDDHYKILKEGSEGPAVVTVERRTL--KNGPFDMKFTALDQSMKVISLNDTARVS 565
++ D +KI+ + + V TV + ++ K K A+D + + I + D R
Sbjct: 618 VI-QAGHDIFKIIDDSGK---VATVTKGSILAKINVARAKVAAVDGNGREIKIGDVVR-- 671
Query: 566 EGPSKDRQGIVKKIYRGILFIYDENETENGGYFCSKSQHCEKTKVEACEGK-GGGSGASG 624
E R+G V + +FI + TEN G F VEA K S A
Sbjct: 672 EKIGSRREGQVLYVQNQHIFIRSKTITENAGVFV-----VNPMNVEAVASKENLMSSALD 726
Query: 625 FEEFPSSPKSPLSPKRSWQAREQNTEFKRGDRDGMFAVGQTLRIRVGPLKGYLCRVLAVR 684
+ + S + P ++ Q + + RD A+ +T+RIR KG L V V
Sbjct: 727 LSKINPNIASKMGPPQTTQ------QTRLVGRD--VALNKTVRIRSAGYKGQLGIVKDVN 778
Query: 685 YSDVTVKLDSQQKILTVKGEHLA 707
T++L S+ K +T+ L
Sbjct: 779 GDKATIELHSKNKHITIDKRKLT 801
>sp|P0CR71|SPT5_CRYNB Transcription elongation factor SPT5 OS=Cryptococcus neoformans
var. neoformans serotype D (strain B-3501A) GN=SPT5 PE=3
SV=1
Length = 1152
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 135/278 (48%), Gaps = 26/278 (9%)
Query: 177 KEEEMDEEEFDKMMEERYKSNKLIRY-AEEDYEAKKMLEREYHMPCPEDPTIWKVKCMAG 235
+ EE D + + ++ER+ RY + D +++L MP DP++WKV +G
Sbjct: 162 RNEEEDVHDIVQRLKERHAGAA--RYNGDSDAVPQRLL-----MPGVNDPSLWKVVVKSG 214
Query: 236 RERQSAFCLMQKFVDLQSLGSKMQIISAFAVDHIKGFIFIEADKQCDINEACKGLSGIYY 295
RE + +K Q + + +IS F D I G IFIEA + ++ A G+ GI+
Sbjct: 215 REHAICASIFRKVFAQQYSANPIDVISVFCRDSIPGMIFIEARQSASVSAAVNGIVGIFM 274
Query: 296 SR-LAPVPKNEVSHLLSAQIKRNEVSEGTWAYVKNGKYKGDLAQVVYVNNARKRAT-VKL 353
SR + VP E++ LL + K ++ G W +K GK+ GDLAQVV V+ +K
Sbjct: 275 SRGVNLVPIEEMAPLLKMKKKDVNLTPGMWVRMKRGKHAGDLAQVVDVDQITSGVVGIKF 334
Query: 354 IPRIDL-------QALAAKFGGGVAMKKTDSPAPRLISPSELEEFRPLIQYRRDRDTGKV 406
IPRIDL + +A GGV P RL + ++ + R+ +
Sbjct: 335 IPRIDLTPREKRKERIAIGKPGGV------RPPARLFAYDDVRKIYGRQSVRQGAQGSYL 388
Query: 407 FENLDGMMLKDGYLYKKVSIDSLSCWGVVPSEEELLKF 444
F+N + + DG+ K V I +++ V P+ EE+ +F
Sbjct: 389 FDNDEYV---DGFCIKDVKIPAVATEDVNPTLEEISRF 423
>sp|P0CR70|SPT5_CRYNJ Transcription elongation factor SPT5 OS=Cryptococcus neoformans
var. neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=SPT5 PE=3 SV=1
Length = 1152
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 135/278 (48%), Gaps = 26/278 (9%)
Query: 177 KEEEMDEEEFDKMMEERYKSNKLIRY-AEEDYEAKKMLEREYHMPCPEDPTIWKVKCMAG 235
+ EE D + + ++ER+ RY + D +++L MP DP++WKV +G
Sbjct: 162 RNEEEDVHDIVQRLKERHAGAA--RYNGDSDAVPQRLL-----MPGVNDPSLWKVVVKSG 214
Query: 236 RERQSAFCLMQKFVDLQSLGSKMQIISAFAVDHIKGFIFIEADKQCDINEACKGLSGIYY 295
RE + +K Q + + +IS F D I G IFIEA + ++ A G+ GI+
Sbjct: 215 REHAICASIFRKVFAQQYSANPIDVISVFCRDSIPGMIFIEARQSASVSAAVNGIVGIFM 274
Query: 296 SR-LAPVPKNEVSHLLSAQIKRNEVSEGTWAYVKNGKYKGDLAQVVYVNNARKRAT-VKL 353
SR + VP E++ LL + K ++ G W +K GK+ GDLAQVV V+ +K
Sbjct: 275 SRGVNLVPIEEMAPLLKMKKKDVNLTPGMWVRMKRGKHAGDLAQVVDVDQITSGVVGIKF 334
Query: 354 IPRIDL-------QALAAKFGGGVAMKKTDSPAPRLISPSELEEFRPLIQYRRDRDTGKV 406
IPRIDL + +A GGV P RL + ++ + R+ +
Sbjct: 335 IPRIDLTPREKRKERIAIGKPGGV------RPPARLFAYDDVRKIYGRQSVRQGAQGSYL 388
Query: 407 FENLDGMMLKDGYLYKKVSIDSLSCWGVVPSEEELLKF 444
F+N + + DG+ K V I +++ V P+ EE+ +F
Sbjct: 389 FDNDEYV---DGFCIKDVKIPAVATEDVNPTLEEISRF 423
>sp|Q759T6|SPT5_ASHGO Transcription elongation factor SPT5 OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=SPT5 PE=3 SV=2
Length = 958
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 180/396 (45%), Gaps = 51/396 (12%)
Query: 175 IPKEEEMDEEEFDKMMEERY--KSNKLIRYAEEDYEAKKMLEREYHMPCPEDPTIWKVKC 232
+ K E D ++ K + ERY S+K R A +D + + + +P + T+W V+C
Sbjct: 141 LQKSSEEDAQKLAKELRERYGRSSSKQYRAAAQD----GYVPQRFMLPSVDTATVWGVRC 196
Query: 233 MAGRERQSAFCLMQKFVDLQ-SLGSK-MQIISAFAVDHIKGFIFIEADKQCDINEACKGL 290
G+E+ L++K +L S+GSK ++I+S F D G I+IEA KQ I + C G+
Sbjct: 197 RPGKEKDLVKKLLKKKFNLDKSMGSKKLKILSIFQRDSFSGRIYIEAPKQSVIEKFCNGV 256
Query: 291 SGIYYSRLAPVPKNEVSHLLSAQIKRNEV--SEGTWAYVKNGKYKGDLAQVVYVNNARKR 348
IY ++ +P E+ LL K ++V G++ +K G YKGDLA V +++
Sbjct: 257 PDIYVNQKLLIPVQELPLLLKPS-KSDDVRLEPGSYVRIKRGIYKGDLAVVEQLSDNNLE 315
Query: 349 ATVKLIPRIDL----------QALAAKFGGGVAMKKTDSPAPRLISPSELEEFRPLIQYR 398
+K++PR+D Q AK + P P+L +P+ Y+
Sbjct: 316 CMLKVVPRLDYGKNDEVDPDTQQKKAK-----KVSFAQRPPPQLFNPTMALRMDQANLYK 370
Query: 399 RDRDTGKVFENLDGMMLKDGYLYKKVSIDSLSCWGVVPSEEELLKFQPSESNESADLEWL 458
RD + + N D + DGYL K I L + P+ EEL +F + + DL +
Sbjct: 371 RD-EKHFTYRNEDYI---DGYLIKVFKIQYLKTANIHPTVEELARF--GSKDGAVDLTTI 424
Query: 459 SQLYGERKKKRTTIVGKGGDKGE-------GSSGSSLENSFELY--ELVCFGRKDFGLIV 509
SQ +K + + + + GD+ E GS G S ++ L F K G V
Sbjct: 425 SQTI--KKAQASKAMFQPGDRVEILNGEQRGSKGYVTRTSTDIISVSLTGFNAKPLGFPV 482
Query: 510 G-----MEKDDHYKILKEGSEGPAVVTVERRTLKNG 540
E DH ++ +G A + + +KNG
Sbjct: 483 SSLRKIFEPGDHVSVMSGDHQGDAGLVL---IVKNG 515
>sp|Q6BZG0|SPT5_DEBHA Transcription elongation factor SPT5 OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=SPT5 PE=3 SV=2
Length = 967
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 173/419 (41%), Gaps = 63/419 (15%)
Query: 179 EEMDEEEFDKMMEERYKSNKLIRYAEEDYEAKKMLEREYHMPCPEDPTIWKVKCMAGRER 238
E+ D E + +++RY+ + D A + ++ MP DP I+ ++C GRE+
Sbjct: 202 EDQDAEVLAETLKQRYRKTHTVYRG--DTTASGTVSQKLLMPSINDPAIYAIRCTPGREK 259
Query: 239 QSAFCLMQKFVDLQSLGSKMQIISAFAVDHIKGFIFIEADKQCDINEACKGLSGIYYSRL 298
L +K L + + ++I++ F D KG+I+IEA K I A G+ IY +
Sbjct: 260 DLVRKLYEKKRTL-ARSNPLEILTVFQRDSFKGYIYIEAKKPEAIERALTGMVNIYAKQR 318
Query: 299 APVPKNEVSHLLSAQIKRN--EVSEGTWAYVKNGKYKGDLAQVVYVNNARKRATVKLIPR 356
VP E LL Q+K + E+ G + + GKYK DLA V ++ KL+PR
Sbjct: 319 LLVPVREYPDLLK-QVKSSDVEIVPGIYVRITRGKYKNDLAIVDNLSENGLDVRCKLVPR 377
Query: 357 IDLQALAAKFGGGVAMKKTDSPAPRLISPSELEEF-----------RPLIQYRRDRDTGK 405
+D G ++ P PRL S E + R I YR
Sbjct: 378 LDYGKNDDFDKDGKRIRSKTKPIPRLFSEQEARMYDGEYLQSGRGPRAFI-YR------- 429
Query: 406 VFENLDGMMLKDGYLYKKVSIDSLSCWGVVPSEEELLKFQPSESNES-ADLEWLSQLYGE 464
G +G+L+K + + V P EEL +FQ + E DL ++
Sbjct: 430 ------GEEYNEGFLFKDFKLQFIQTKDVHPKLEELDRFQTGDPEEDGLDLAAIA----- 478
Query: 465 RKKKRTTIVGKGGDKGEGSSGSSLENSFELYELVCFGR----KDFGLIVGMEKDDHYKIL 520
++ K +G G S ++F+ + V R K G ++ ++ IL
Sbjct: 479 -----ASLKNKNNSEGAGRS-----SAFQPGDKVEIRRGEQAKTIGKVLSTSLNE-ITIL 527
Query: 521 KEGSEGPAVVTVERRTLKNGPFDMKFTALDQSMKVISLNDTARVSEGPSKDRQGIVKKI 579
S P V +R T+ D++ K+ S D RV EG D G+V KI
Sbjct: 528 VTDSGDPKFVN-QRLTVPAN--DLR--------KLFSAGDHVRVIEGKHSDETGLVIKI 575
>sp|Q5ALX3|SPT5_CANAL Transcription elongation factor SPT5 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=SPT5 PE=3 SV=1
Length = 956
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 144/315 (45%), Gaps = 24/315 (7%)
Query: 179 EEMDEEEFDKMMEERYKSNKLIRYAEEDYEAKKMLEREYHMPCPEDPTIWKVKCMAGRER 238
E+ D E+ + +++RY+ + E A + ++ MP DP+I+ ++C GRE+
Sbjct: 168 EDQDAEQLAETLKQRYRKTHSVYRGET--AASGTVSQKLLMPSINDPSIYAIRCTPGREK 225
Query: 239 QSAFCLMQKFVDLQSLGSKMQIISAFAVDHIKGFIFIEADKQCDINEACKGLSGIYYSRL 298
+ L +K L+ G+ + I++ F D G+I+IEA + I++A G+ ++
Sbjct: 226 ELVRKLYEKKRTLERQGNPLDILTVFQRDAFTGYIYIEAKRPDAIDKALVGMVNVFVRDK 285
Query: 299 APVPKNEVSHLLSAQIKRN--EVSEGTWAYVKNGKYKGDLAQVVYVNNARKRATVKLIPR 356
VP E LL Q+K + E+ G + +K G Y+GDLA V ++ +++PR
Sbjct: 286 LLVPVKEYPDLLK-QVKSSDVEIRPGIYVRIKRGIYRGDLAIVDNLSENGLDVRCQVVPR 344
Query: 357 IDLQALAAKFGGGVAMKKTDSPAPRLISPSELEEFRPLIQYRRDRDTGKVFENLD--GMM 414
+D G +K P P L S + + P Y+ G+V + G
Sbjct: 345 LDYGQNDEIGPDGKVIKSKIKPLPALFSEQKARMYDP---YK--LQMGRVPNSFIYRGNE 399
Query: 415 LKDGYLYKKVSIDSLSCWGVVPSEEELLKFQPSESNESADLEWLSQLYGERKKKRTTIVG 474
DGYLYK + + V P+ EEL +FQ + +L+ ++
Sbjct: 400 YYDGYLYKDFKLQFIQTKDVNPTLEELDRFQNQNDEDGLNLQAIAATL------------ 447
Query: 475 KGGDKGEGSSGSSLE 489
KG + GEG S ++ +
Sbjct: 448 KGNNAGEGKSSTAFQ 462
>sp|Q7S3C4|SPT5_NEUCR Transcription elongation factor spt-5 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=spt-5 PE=3 SV=2
Length = 1052
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 144/318 (45%), Gaps = 21/318 (6%)
Query: 178 EEEMDEEEFDKMMEERYKSNKLIRYAEEDYEAKKMLEREYHMPCPEDPTIWKVKCMAGRE 237
E +D E+ +++ ERY R Y ++ R +P EDP+IW V+C G+E
Sbjct: 194 EASLDAEKQAEILRERYGK----RAPARGYGDMAIVPRRLLLPSVEDPSIWAVRCKEGKE 249
Query: 238 RQSAFCLMQKFVDLQSLGSKMQIISAFA---VDHI-KGFIFIEADKQCDINEACKGLSGI 293
R+ F +M++ + +++ I +AF ++ + KG+I++EA +Q DI A G+ +
Sbjct: 250 REVIFSIMRRIEERMGTKNEVPITAAFERGGINSVMKGYIYVEAQRQNDILVALDGILNV 309
Query: 294 Y-YSRLAPVPKNEVSHLLSAQIKRNEVSEGTWAYVKN-GKYKGDLAQVVYVNNARKRATV 351
Y S + V ++ LL IK + G W +K K+ GDLAQV+ V A V
Sbjct: 310 YPRSNMHLVEIKDMPDLLRV-IKTPNLEPGAWVRLKKPAKHAGDLAQVIDVTENGLEARV 368
Query: 352 KLIPRIDL-----QALAAKFGGGVAMKKTDSPAPRLISPSELEEFRPLIQYRRDRDTGKV 406
+ IPR+D A P RL S +E + P +Y +
Sbjct: 369 RFIPRLDYGVRDDPVFQADGKRKRPGVPGPRPPQRLFSEAEARKRHP--RYLQGNPQTNS 426
Query: 407 FENLDGMMLKDGYLYKKVSIDSLSCWGVVPSEEELLKFQ--PSESNESADLEWLSQLYGE 464
+ N +G ++G+ K + I L V P+ EE+ KF + E+ DL+ L+ +
Sbjct: 427 W-NYNGDDFENGFQVKDIKIQQLEVKNVNPTLEEVTKFASGAEDGTENLDLKALAATLKD 485
Query: 465 RKKKRTTIVGKGGDKGEG 482
K + G + EG
Sbjct: 486 SAKSVAYVPGDIIEVYEG 503
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 105/244 (43%), Gaps = 34/244 (13%)
Query: 480 GEGSSGSSLENSFELYELVCFGRKDFGLIVGMEKDDHYKILKEGSEGPAVVTVERRTLKN 539
G+GS G + L +LV G IV ++++ + + G V+ + N
Sbjct: 600 GQGSLGQ-----YSLLDLVQLDATTVGCIVKVDRESVVVLDQNGDTK----QVQPSQITN 650
Query: 540 GPFDMKF-TALDQSMKVISLNDTARVSEGPSKDRQGIVKKIYRGILFIYDENETENGGYF 598
KF A D++ I L+D R G + RQG + I+R +F++ EN G F
Sbjct: 651 KLPKRKFAVAADRNGSEIRLDDVVREYGG--QQRQGKIIHIHRSYIFLHTTTTNENAGVF 708
Query: 599 CSKSQHCEKTKVEACEGKGGGSGASGFEEFPSSPKSPLSP--KRSWQAREQNTEFKR--- 653
+++ V KGG + A+ + S ++P KR+ A + R
Sbjct: 709 VTRAN-----SVTTVAAKGGRNTATAGPDL-----SAMNPALKRNPTASGKQMPAPRTFG 758
Query: 654 GDRDGMFAVGQTLRIRVGPLKGYLCRVLAVRYSDVTVKLDSQQKILTVKGEHLA---EVR 710
DR A+ QT+ IR G KG L V + V+L S+ KI+T+ L+ +V
Sbjct: 759 PDR----AINQTVVIRRGGYKGLLGIVKDTTDTHARVELHSRGKIITIPKADLSFKDKVT 814
Query: 711 GKSF 714
GK+
Sbjct: 815 GKTI 818
>sp|Q9V460|SPT5H_DROME Transcription elongation factor SPT5 OS=Drosophila melanogaster
GN=Spt5 PE=1 SV=1
Length = 1078
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 142/299 (47%), Gaps = 43/299 (14%)
Query: 183 EEEFDKMMEERYKSNKLIRYAEEDY-----EAKKMLEREYHMPCPEDPTIWKVKCMAGRE 237
E+E ++ + ++Y + A+ + E + ++ +P +DP +W VKC G E
Sbjct: 170 EDEIEEYLRKKYADESI---AKRHFGDGGEEMSDEITQQTLLPGIKDPNLWMVKCRIGEE 226
Query: 238 RQSAFCLMQKFVDLQSLGSKMQIISAFAVDHIKGFIFIEADKQCDINEACKGLSGIYYS- 296
+ +A LM+K++ + +QI S A + +KG+I++EA KQ + + +
Sbjct: 227 KATALLLMRKYLTYLNTDDPLQIKSIIAPEGVKGYIYLEAYKQTHVKTCIDNVGNLRMGK 286
Query: 297 -RLAPVPKNEVSHLLSAQIKRNEVSEGTWAYVKNGKYKGDLAQVVYVNNARKRATVKLIP 355
+ VP E++ +L ++ + W +K G YK D+AQV YV+ A+ + +KL+P
Sbjct: 287 WKQEMVPIKEMTDVLKVVKEQVGLKVKQWVRLKRGLYKDDIAQVDYVDLAQNQVHLKLLP 346
Query: 356 RIDLQALAAKFGGGVAMKKTDS----------PAPRLISPSELEEFRPLIQYRRDRDTGK 405
RID + G + T+S PA + P + E R + G+
Sbjct: 347 RID----YTRMRGALRTTATESDDSKRKKKRRPAAK---PFDPEAVRAI--------GGE 391
Query: 406 VFENLDGMML------KDGYLYKKVSIDSLSCWGVVPSEEELLKFQPSESNESADLEWL 458
V + D ++ + G+LYK ++ ++ GV P+ EL +F+ ES E +LE +
Sbjct: 392 VHSDGDFLLFEGNRYSRKGFLYKNFTMSAILSDGVKPTLAELERFE--ESPEEVNLEIM 448
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 496 ELVCFGRKDFGLIVGMEKDDHYKILKEGSEGPAVVTVERRTLKNGPFDMKFTALDQSMKV 555
++V ++ G+IV +E+++ + + G G + + L + ALD
Sbjct: 579 DMVQLDSQNVGVIVRLERENFHVL---GMNG-KCIECKPTALHKRKENRHTVALDADQNQ 634
Query: 556 ISLNDTARVSEGPSKDRQGIVKKIYRGILFIYDENETENGGYFCSKSQHCE-----KTKV 610
I D +V EGP R G +K +YR + F++ TENGG F K++H + KT V
Sbjct: 635 IRRRDVVKVMEGPHAGRSGEIKHLYRSLAFLHCRMYTENGGIFVCKTRHLQLAGGSKTTV 694
Query: 611 EACEGKGGGSGASGFEEFPSSPK--SPLSPKRSWQAREQNTEFK---RGDRDGMFAVGQT 665
G G GF SP+ SP+ P AR + R RD +G+T
Sbjct: 695 ----SNAGIVGGLGF----MSPRIQSPMHPSGGRGARGGARGGRGGFRVTRDREI-LGKT 745
Query: 666 LRIRVGPLKGYLCRVLAVRYSDVTVKLDSQQKILTVKGEHLAEV 709
++I GP KG + V S V+L + + ++V H+A V
Sbjct: 746 IKISGGPYKGAVGIVKDATESTARVELHTSCQTISVDRNHIAIV 789
>sp|Q4I5I4|SPT5_GIBZE Transcription elongation factor SPT5 OS=Gibberella zeae (strain
PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=SPT5
PE=3 SV=1
Length = 1042
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 164/361 (45%), Gaps = 34/361 (9%)
Query: 181 MDEEEFDKMMEERYKSNKLIRYAEEDYEAKKMLEREYHMPCPEDPTIWKVKCMAGRERQS 240
MD E+ +++ +RY + R + + + ++ + +P +DP+IW V+C G+ER+
Sbjct: 174 MDAEKQAEILRQRYGN----RRSGKGFRDVSVVPKRLLLPSVDDPSIWAVRCKEGKEREV 229
Query: 241 AFCLMQKFVDLQSLGSKMQIISAFA---VDHI-KGFIFIEADKQCDINEACKGLSGIY-Y 295
F +M++ + ++ I +AF ++ + KGF+++EA +Q DI + + +Y +
Sbjct: 230 VFSIMKRIEERAGTKDELAITAAFERGGIESVMKGFVYVEARRQTDILKGLDSMMNVYPH 289
Query: 296 SRLAPVPKNEVSHLLSAQIKRNEVSEGTWAYVKN-GKYKGDLAQVVYVNNARKRATVKLI 354
S++ V ++ L K + G W ++ K+ GDLAQV+ V A V+ I
Sbjct: 290 SKMILVDIKDMPELFRIS-KTPTLEPGAWVRLRRPPKHNGDLAQVIDVTENGLEARVRFI 348
Query: 355 PRIDL----QALAA------KFGGGVAMKKTDSPAPRLISPSELEEFRPLIQYRRDRDTG 404
PR+D AL+A FG G P RL S E + P + + TG
Sbjct: 349 PRLDYGMRDDALSADGKRKRPFGNG------PKPPQRLFSEIEARKRNPR-AIQGNPSTG 401
Query: 405 K-VFENLDGMMLKDGYLYKKVSIDSLSCWGVVPSEEELLKFQ--PSESNESADLEWLSQL 461
+ N + ++G+ + V I L+ V PS EE+ +F + E+ DL+ L+
Sbjct: 402 TWTYNNEE---FENGFQVRDVKIQQLTVTDVNPSLEEVTRFASGAEDGTENLDLKALAHS 458
Query: 462 YGERKKKRTTIVGKGGDKGEGSSGSSLENSFELYELVCFGRKDFGLIVGMEKDDHYKILK 521
+ T + G + G + + ++ V G +VG E D + L+
Sbjct: 459 LKDSNALATYLPGDVVEVYTGEQKGVVGKAMRVHSDVVSITVTEGELVGQEIDVPIRALR 518
Query: 522 E 522
+
Sbjct: 519 K 519
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 100/238 (42%), Gaps = 36/238 (15%)
Query: 480 GEGSSGSSLENSFELYELVCFGRKDFGLIVGMEKDDHYKILKEGSEGPAVVTVERRTLKN 539
G+GS G + L++LV G +V ++++ + + G+ P V + + K
Sbjct: 576 GQGSLGQ-----YSLHDLVQLDPTTVGCVVKVDRESLVALDQFGT--PRQVMPSQISNKI 628
Query: 540 GPFDMKFTALDQSMKVISLNDTARVSEGPSKDRQGIVKKIYRGILFIYDENETENGGYFC 599
P A+D+ I L D V E + RQG + I+R +F++ + E+ G F
Sbjct: 629 -PKRKTAVAVDRHGSEIRLEDV--VKEYTGQQRQGKIIHIHRSYIFLHSNDNKEHAGVFV 685
Query: 600 SKSQHCEKTKVEACEGKGGGSGASGFEEFPSSPK----------SPLSPKRSWQAREQNT 649
+K+ V A G+ + A+G + +P P+ P RS+ +
Sbjct: 686 TKANMVN--TVAAKGGRVNTAAATGPDLTAMNPALKLHKNGSENKPVPPPRSFGKDK--- 740
Query: 650 EFKRGDRDGMFAVGQTLRIRVGPLKGYLCRVLAVRYSDVTVKLDSQQKILTVKGEHLA 707
A+ QT+ I+ G KG L V + V+L ++ K +TV + LA
Sbjct: 741 -----------AIEQTVVIKKGAYKGLLGIVKDTTDTHARVELHTKSKTITVPKDCLA 787
>sp|P82003|PTSP_BOMMO Prothoracicostatic peptide OS=Bombyx mori PE=1 SV=2
Length = 274
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 92/177 (51%), Gaps = 48/177 (27%)
Query: 1001 SSWAK---QDGGSSWGKKNGGSLMGKQDGGSSWGKQDGGSSLGKQDGGSSWGKQDGRSSL 1057
S WAK QD S+WGK+ QD S+WGK+ G QD S+WGK+
Sbjct: 50 SGWAKRAWQDMSSAWGKR------AWQDLNSAWGKR------GWQDLNSAWGKR------ 91
Query: 1058 AKQDGGSSWGK---QDRGSSWGKQDEGSSWSKR---DGGSSWGKQDGGSSLAKQDGGSSW 1111
A QD S+WGK QD S+WGK+D+ + K+ D S WGK+ A QD S+W
Sbjct: 92 AWQDLNSAWGKRGWQDLNSAWGKRDDDEAMEKKSWQDLNSVWGKR------AWQDLNSAW 145
Query: 1112 GKQDGGSSLGKQDGGSSWSKQ---DGGSSWGK---QDGGSSWGK---QDGGSSWGKQ 1159
GK+ QD S+W K+ D S WGK QD S+WGK QD S+WGK+
Sbjct: 146 GKR------AWQDLNSAWGKRGWNDISSVWGKRAWQDLNSAWGKRAWQDMSSAWGKR 196
>sp|Q86B20|EIF3A_DICDI Eukaryotic translation initiation factor 3 subunit A OS=Dictyostelium
discoideum GN=eif3A PE=1 SV=1
Length = 1030
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 1067 GKQDRGSSWGKQDEGSSWSKRDGGSSWGKQDGGSSLAKQDGGSSWGKQDGGSSLGKQDGG 1126
K D G WG++++ + +GG WG+++ + +GG WGK++ + +GG
Sbjct: 808 SKADEGDRWGRREDAPPPRRDEGGDRWGRREDAPPPRRDEGGDRWGKREDAPPPRRDEGG 867
Query: 1127 SSWSKQDGGSSWGKQDGGSSWGKQDGGSSWG 1157
WG++D + +GG WG
Sbjct: 868 -----------WGRRDDAPPPRRDEGGDRWG 887
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 63/153 (41%), Gaps = 26/153 (16%)
Query: 1007 DGGSSWGKKNGGSLMGKQDGGSSWGKQDGGSSLGKQDGGSSWGKQDGRSSLAKQDGGSSW 1066
+GG WG++ + +GG WGK++ + +GG WG++D + +GG W
Sbjct: 829 EGGDRWGRREDAPPPRRDEGGDRWGKREDAPPPRRDEGG--WGRRDDAPPPRRDEGGDRW 886
Query: 1067 GKQDR------------------------GSSWGKQDEGSSWSKRDGGSSWGKQDGGSSL 1102
G++D G WG++D+ G +G + +
Sbjct: 887 GRRDDAPPRRDDAPPPRRDDAPPPRRDEGGDRWGRRDDAPPRRDGGGSGGFGGRRDDAPP 946
Query: 1103 AKQDGGSSWGKQDGGSSLGKQDGGSSWSKQDGG 1135
+ +GG WG+++ + +GG W ++D
Sbjct: 947 RRDEGGDRWGRREDAPPPRRDEGGDRWGRRDDA 979
>sp|Q54G14|Y0266_DICDI Uncharacterized protein DDB_G0290685 OS=Dictyostelium discoideum
GN=DDB_G0290685 PE=2 SV=2
Length = 1081
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 95/206 (46%), Gaps = 13/206 (6%)
Query: 1528 GGWNNNDSGDYKSFDSSQGVKNGGEWSRS---NDGAGSWSQGGGTWKSGNSGASSQDGGW 1584
GG NN GD + D + ++GGE ++ N+ G +Q GG +SG ++QDGG
Sbjct: 461 GGENN--QGDQNNQDGGENNQDGGENNQDGHGNNQDGENNQDGGENNQ-DSGENNQDGGE 517
Query: 1585 SSQGSGWNNSNTTNEVKGLSDQGGGWNKGAGG-SAQAGGWGRQGSGWSSGTSTGNRGSND 1643
++Q G NN + G ++Q GG N GG + Q GG Q G ++ N+ +N
Sbjct: 518 NNQDGGENNQDG-----GENNQDGGENNQDGGENNQDGGENNQ-DGENNQDGENNQENNR 571
Query: 1644 SSIANDVKGPNDQVVGRNKGSNGSAQSGGWGNQGSGWSSGTGSGNKGSNDSNISNKGPND 1703
N G N+Q G N + Q GG NQ G + G N N + G N+
Sbjct: 572 DGENNQDGGENNQDGGENNQDGENNQDGGENNQDDGENKQDGGENNQDGGENNQDDGENN 631
Query: 1704 QGGGWNKGSGGSAQSGAWGNQGSGWN 1729
Q G N+ G + Q G NQ SG N
Sbjct: 632 QDGENNQDGGENNQDGDENNQDSGEN 657
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.307 0.129 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 830,084,235
Number of Sequences: 539616
Number of extensions: 45705391
Number of successful extensions: 302129
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 1652
Number of HSP's that attempted gapping in prelim test: 104972
Number of HSP's gapped (non-prelim): 62565
length of query: 1790
length of database: 191,569,459
effective HSP length: 132
effective length of query: 1658
effective length of database: 120,340,147
effective search space: 199523963726
effective search space used: 199523963726
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 69 (31.2 bits)