Your job contains 1 sequence.
>000256
MWQLMPETDGSSHHLLHVPLKDSPLSDCGGLCGDLDVQIELENSGAFSDLYVVKGIGIGH
EMVSVHLLETEFMHMADSILLTVAEAMSIEPPSPVFVLVGAALQYKLKVIRGNIPQVVAL
PSPHHRWSVSNSSVAQVDNMMGLTQALRLGQTAVIVEDTRVAGHTQVSSLNVVLPDTLWL
YISPLSISGDPVEGTKAIPSVARWFVVSGFQYLIQMKVFSQGPGSQEIYITESDDIKLSD
NQSECWRTFSMPNDLVLKHGWRNSRILKATSQGLGKLTASLTYFSGLHDTKEVLKVVQEI
MVCDRIKFSLDQTNGVSESILLPWAPGIYQEVELMATGGCAKTSSDYKWFSSDMATVSIT
ASGVVQAKKPGKATVKVVSIFDSFNYDEIVIEVSTPSSMVMLRNFPVETVVGSHLQAAVT
MKTLNGAYFYRCDAFSSSVNWKAGSESFIVLNATKKQPFLDKLGTVEHDISLHGPPCSWA
HLYASSSGRTMLHATLSKDYQHFDRSFDGPIVLKASSRIAAYPPLIVQQAGDGSGFGGYW
FNLGQSETTTQMEALDKLYLVPRTHVDVLLVGGPEPWEEDVDFIETFEIFNGKHNHASDG
VHIHVVSGSSKNLYGVFCQTLGTFELVFKRGNLVGDDHPLPAVAEVSLSVTCSFPASIAL
LVDEPVNERKVIQTAAQADRSPGRIRVTPVTVANGQTIRIAAVGISSSGEAFANSSSLCL
GWELSNCDGLAYWDDAYGSQKSASSWERFLVLQNESGLCVVRATASGFCDAKDGHHSAQL
LEISESFLTDAVRLQLVSTLRVNPEYNLLFFNPDAKANLSIAGGSCFLEAAVNDSQVVEV
IQAPEGLRCLQLMLSPKGLGTALVTVYDVGLAPPRAASALVQVADVDWIKIMSGEEISLM
YTYMDIRVHIEDHIVELIDDDATSSPDGGYFSMSSFKIMAKHLGITTLYVSARQQSGHEI
LSQPIRVEVYAPPRIHPHDIFLVPGASYMLTLKGGPTVGVYVDYTSTDEEIATIHRSSGQ
LFAISPGNTTLIATVFGNGDVVICQAFSSVKVGVPSSVTLNAQSDQLAVGHEMPIHPLFP
EGDVFSFYELCRNYNWTIEDEKILGFWLGDQLHSENQDLQSAASGEIQFSNDLDKKELGF
IKTLYGRSAGRTDVATTFSCDFVSDSYSESRIYSASISLSVVSDLPLALGIPVTWVLPPH
YTSTSLLPSSSESHGQWDSQSHKGSIVYSLLKFCSEKNEAASKDDISIDGDTIKTTSSNH
LACIQAKDRSSGRIEIASCVRVAEVAQIRISNRYPLNVIHLAVGAECEIPISYYDALGTP
FHEAHNVILYHAETNYHDVVSINYTLNGSGKIYLKAKQHGRALVQVSMNRSPQKSDYVLV
SVGAQLYPQNPVLHVGGSLDFSVEGFSDQVSGHWFSDNESVVHVHMPSGKAEAVGIGSTK
VFFECPSMKLQTTVTVLSKNIVSIDAPKEVLTNIPYPTKGYTFAVRFGDTHKLKALENKA
ISYDCEADPPFVGYAKPWMDLDTGNLYCLFFPYSPEHLLRSVPKSKDTSPFISVSVNASL
REAHRISGSASASALFVGGFSILEMDKSSLQLNLTSDSNKTTITILGNTGVEIHWQNQDL
LKISPVHKEDIGIGGHAQYEVSVLRTKKFKDKIIFTLPANGQRVEVDVNFEPGQREESNR
IFASFIGFFAVFSLIVVFSIAILDGRKRSTRSQPSVSPATPYATAPGTPEHSIPTVSNEQ
SPRTPQPFVDYVRRTIDETPNYRREARRRFNVQNTF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000256
(1776 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
DICTYBASE|DDB_G0288545 - symbol:nup210 "nucleoporin 210" ... 239 2.8e-44 5
UNIPROTKB|F1NZB4 - symbol:NUP210 "Uncharacterized protein... 267 3.2e-36 4
UNIPROTKB|F1SPG4 - symbol:NUP210 "Uncharacterized protein... 267 5.9e-36 5
MGI|MGI:1924845 - symbol:Nup210l "nucleoporin 210-like" s... 251 2.0e-35 3
ZFIN|ZDB-GENE-050208-132 - symbol:nup210 "nucleoporin 210... 226 1.3e-34 5
UNIPROTKB|Q5VU65 - symbol:NUP210L "Nuclear pore membrane ... 240 1.2e-33 3
UNIPROTKB|Q8TEM1 - symbol:NUP210 "Nuclear pore membrane g... 253 1.3e-32 3
MGI|MGI:1859555 - symbol:Nup210 "nucleoporin 210" species... 258 7.4e-31 4
UNIPROTKB|F1MPW7 - symbol:NUP210 "Uncharacterized protein... 252 1.1e-29 5
RGD|69339 - symbol:Nup210 "nucleoporin 210" species:10116... 245 2.7e-29 3
WB|WBGene00003798 - symbol:npp-12 species:6239 "Caenorhab... 166 7.1e-20 5
FB|FBgn0033039 - symbol:Gp210 "Gp210 ortholog (H. sapiens... 113 1.0e-06 6
>DICTYBASE|DDB_G0288545 [details] [associations]
symbol:nup210 "nucleoporin 210" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0044351 "macropinocytosis" evidence=RCA] dictyBase:DDB_G0288545
GenomeReviews:CM000154_GR eggNOG:NOG315446 KO:K14314
InterPro:IPR003343 InterPro:IPR008964 SMART:SM00635 SUPFAM:SSF49373
EMBL:AAFI02000116 OMA:DIICFDS RefSeq:XP_636668.1
EnsemblProtists:DDB0235250 GeneID:8626681 KEGG:ddi:DDB_G0288545
InParanoid:Q54IS9 ProtClustDB:CLSZ2497129 Uniprot:Q54IS9
Length = 1916
Score = 239 (89.2 bits), Expect = 2.8e-44, Sum P(5) = 2.8e-44
Identities = 94/375 (25%), Positives = 169/375 (45%)
Query: 36 DVQIELENSGAFSDLYVVKGIGIGHEMVSVHLLETEFMHMADSILLTVAEAMSIEPPSPV 95
DV +++E + +V+G+ G ++ L E + + S +++ E + + P +
Sbjct: 219 DVALKMEQESLQTSFVLVQGVDTGRTEINTKLTEPTYKDIQHSTTISILEPLQLNPSYLL 278
Query: 96 FVLVGAALQYKLKVIRGNIPQVVALPSPHHRWSVSNSSVAQVDNMMGLTQALRLGQTAVI 155
+V+ G +QY+L + NI + + LP+P++ WS SNS V +VDN G AL LG+T +
Sbjct: 279 YVIPGTQIQYQLLTKKRNILENIPLPNPNYIWSSSNSKVGKVDNS-GNFMALDLGRTDLK 337
Query: 156 VEDTRVAGHTQVSSLNVVLPDTLWLYISPLSISGDPVEGTKAIPSVARWFVVSGFQYLIQ 215
V+ ++ + + +NVV P L + I PL SG + V+ W ++ Y++
Sbjct: 338 VQHKNMSDNKVQAFVNVVHPSYLAIKIEPLK-SG--------LGPVSNWNLIENRDYILV 388
Query: 216 MKVFSQGPGSQEIYITE-SDDIKLSDNQSECWRTFSMPNDLVLKHGWRNSRILKATSQGL 274
++++ +I+ +E + D+ + E + +P + + ++ LKA QGL
Sbjct: 389 VELYDAS--GHKIHSSEITFDLNIPTEYFERLPSSQIPPNTPKRS---DTFYLKAIKQGL 443
Query: 275 GKLTASLTYFSGLHDTKEVLKVVQEIMVCDRIKFSLDQTNGVSESILLPWAPGIYQEVEL 334
L ASL L+ K+ +++ I V + Q + LP+ P Q +
Sbjct: 444 VALKASLVKVYDLN-LKKYTQLLNPISVEQEVTIH-SQIQLSPPIVYLPYLPNHRQYSMI 501
Query: 335 MATGGCAK-----TSSDYKWFSSDMATVSITASG-----VVQAKKPGKATVKVVSIFDSF 384
GG + +S A S T+SG VV K P +V +
Sbjct: 502 RPIGGSGEYNWYTNNSAIVTVDPTGAITSQTSSGQTEVIVVDKKNPHNRDKVLVIVLQP- 560
Query: 385 NYDEIVIEVSTPSSM 399
DEI+I TPS +
Sbjct: 561 --DEIII---TPSQV 570
Score = 196 (74.1 bits), Expect = 2.8e-44, Sum P(5) = 2.8e-44
Identities = 99/487 (20%), Positives = 196/487 (40%)
Query: 1240 AASKDDISIDGDTIKTTSSNHLACIQAKDRSSGRIEIASCVRVAE--VAQIRISNRYPLN 1297
++ KD I I GD K S + + GR++ + ++ + + + P +
Sbjct: 1394 SSCKDVIDI-GDN-KIVSLDKIGTCYVSAVRDGRMDTSKLFKINSKPFSHLELLPINPTS 1451
Query: 1298 VIHLAVGAECEIPISYYDALGTPFHEAHNVILYHAETNYHDVVSINYTLNGSGKIYLKAK 1357
+ + +G I D +G F E + ++ +E + ++S + N + +K
Sbjct: 1452 TV-IPIGGSMSFAIYLRDDIGEVFTEYGSSAIFSSEVSNTGIISSSIDAN---VVTIKGI 1507
Query: 1358 QHGRALVQVSMNRSPQKSDYVLVSVGAQLYPQNPVLHVGGSLDFSV-------EGFSDQV 1410
+ G + V + P DY+ + VG + P P+LHVG + FS+ GFS
Sbjct: 1508 RAGLVTLHVYLKDMPHLDDYIKIFVGRLVEPHQPILHVGSMITFSIAKDQLEQRGFSLPS 1567
Query: 1411 SGH--WFSDNESVVHVHMPSGKAEAVGIGSTKV-FFECPSMKLQTTVTVLSKNIVSIDAP 1467
S W S + S++ V +GKA A+ G+T + + PS + Q ++ + + + +D
Sbjct: 1568 SDEKVWSSGDPSILQVDPITGKATAIAAGTTTINYIRNPSSQTQVVISKIGR--IKVDFS 1625
Query: 1468 KEVLTNIPYPTKGYTFAVRFGDTHKLKALENKAISYDCEADPPFVGYAKPWMDLDTGNLY 1527
+++ N K Y + ++F A + +S D D G +
Sbjct: 1626 DQIINN---SKKRYEYNLKF-----FTAGSDIELSQDSTIDQNIKGICT----IKESTFA 1673
Query: 1528 CLFFP-YSPEHLLRSV--PKSKDTSPFISVSVNASLREAHRI-SGSASASALFVGGFSIL 1583
FF + R V P TS V++ + AH+ + + F FSI+
Sbjct: 1674 TAFFEKVKGKEQYRCVVQPSGVATSSIDKVTLYVEVSNAHKTYQYDTTINLPFESTFSII 1733
Query: 1584 EMDKSSLQLNLTSDSNKTTI-TILGNTGVEIHWQNQDLLKISPVHKE--DIGIGGHAQYE 1640
+ + +QL S T I I ++ + + + LL + + D + +Y
Sbjct: 1734 NVRDNKIQL---SPRQSTFILNIQSSSPIFVESSDNSLLSVQQISSSGGDDQLNNLYKYA 1790
Query: 1641 VSVLRTK-KFKDKIIFTLPANGQ-RVEVDVNFEPGQREESNRIFASFIGFFAVFSLIVVF 1698
+ + F++ + A+G+ + V V++ S++ S++ + S +F
Sbjct: 1791 IQPMSVSTSFQNVPLLISSADGKSKTTVTVSYSKSGSTTSDQN-TSYVESSTINSHPFLF 1849
Query: 1699 SIAILDG 1705
S I+ G
Sbjct: 1850 SFIIIVG 1856
Score = 143 (55.4 bits), Expect = 2.8e-44, Sum P(5) = 2.8e-44
Identities = 74/324 (22%), Positives = 149/324 (45%)
Query: 880 LVQVAD-VDWI-KIMS--GEEI-SLMYTYMDIRVHIED-HIVELIDDDATSSPDGGYFSM 933
+VQV D ++ I K S G++ S Y YM+I HI++ +++ + T S D F++
Sbjct: 1063 MVQVGDSINLIVKGFSQNGQQFDSTQYQYMNIIPHIDNPNVLSM-----TQSSDSQVFTL 1117
Query: 934 SSFKIMAKHLGITTLYVSARQ-QSGHEILSQPIRVEVYAPPRIHPHDIFLVPGASYMLTL 992
G+ TL V+ + ++ S+ I+++V+ P R+ P + LVPG + +
Sbjct: 1118 KGLD-----QGLVTLSVTIQNPKTSFSATSKTIQIQVFPPFRVSPSVLHLVPGGHFQIHW 1172
Query: 993 KGGPTVGVYVDYTSTDEEIATIH-RSS--GQLFAISPGNTTL--IATVFG--NGD-VVIC 1044
GG + V + S+D I + R G+L A+ G T+ IA + G +I
Sbjct: 1173 TGGAPIRQDVSFVSSDPSIVNLSGREDLVGELVALKVGEATIKAIAQIVDPITGKKTIIG 1232
Query: 1045 QAFSSVKVGVPSSVTLNAQSDQLAVGHEMPIHPLFPEGDV-FSFYELCRNYNWTIEDEKI 1103
+ V V + + +++ +++ VG+E + + G+ F++ + + W D I
Sbjct: 1233 EDKLMVYVKNMTGIRIHSSINKILVGNEAKLRVVGANGETPFTYGTVDLFFKWECLDSNI 1292
Query: 1104 LGFWLGDQLHSENQDLQSAASGEIQFSNDLDKKELGFIKTLYGRSAGRTDVATTFSCDFV 1163
++ E + A G FS ++ + G++AG T + T ++ +
Sbjct: 1293 ATLL---PIY-ERANTTVEAEGS--FS----------VRVM-GKNAGSTSI-TVWA--YS 1332
Query: 1164 SDSYSESRIYSASISLSVVSDLPL 1187
++ +AS+ ++V+ D+P+
Sbjct: 1333 GGDKTKHLFQAASLQINVIPDIPI 1356
Score = 140 (54.3 bits), Expect = 4.9e-34, Sum P(5) = 4.9e-34
Identities = 58/265 (21%), Positives = 122/265 (46%)
Query: 183 SPLSISGDPVEGTKAIPSVARWFVVSGFQYLIQMKVFSQGPGSQEIYITE-SDDIKLSDN 241
S L+I +P++ + V+ W ++ Y++ ++++ +I+ +E + D+ +
Sbjct: 358 SYLAIKIEPLKS--GLGPVSNWNLIENRDYILVVELYDAS--GHKIHSSEITFDLNIPTE 413
Query: 242 QSECWRTFSMPNDLVLKHGWRNSRILKATSQGLGKLTASLTYFSGLHDTKEVLKVVQEIM 301
E + +P + + ++ LKA QGL L ASL L+ K+ +++ I
Sbjct: 414 YFERLPSSQIPPNTPKRS---DTFYLKAIKQGLVALKASLVKVYDLN-LKKYTQLLNPIS 469
Query: 302 VCDRIKFSLDQTNGVSESILLPWAPGIYQEVELMATGGCAKTSSDYKWFSSDMATVSITA 361
V + Q + LP+ P Q + GG S +Y W++++ A V++
Sbjct: 470 VEQEVTIH-SQIQLSPPIVYLPYLPNHRQYSMIRPIGG----SGEYNWYTNNSAIVTVDP 524
Query: 362 SGVVQAK-KPGKATVKVVSIFDSFNYDEIVIEVSTPSSMVMLRNFPVETVVGSHLQAAVT 420
+G + ++ G+ V VV + N D++++ V P +++ + VE VG L+ +
Sbjct: 525 TGAITSQTSSGQTEVIVVDKKNPHNRDKVLVIVLQPDEIIITPS-QVEVQVGQTLKLSTQ 583
Query: 421 M--KTLN-GAYFYRCDAFSSSVNWK 442
+ K L+ G +F C+ + W+
Sbjct: 584 LLSKQLSKGVHFDSCNL--DDLEWR 606
Score = 79 (32.9 bits), Expect = 2.8e-44, Sum P(5) = 2.8e-44
Identities = 31/105 (29%), Positives = 49/105 (46%)
Query: 566 VDVLLVGGPEPWEEDVDFIETFEIFNGKHNHASDGVHI-HVVSGSSKNLYGVFCQT---- 620
++V GGPEPW +E F ++ ++ ++ +V G+ N + V C T
Sbjct: 696 LNVFFSGGPEPWH-----LERKSHFQSIVSNLTNEQNVLSIVPGNG-NSFRVTCLTHTNP 749
Query: 621 ---LGTFELVFKRGNLVGDDHPLPAVAEVSLSVTCSFPASIALLV 662
+G EL GN V +P PA +++ +C PASI L V
Sbjct: 750 SKPIG-IELTI--GNKVTTTNPYPASPSITIPYSCRPPASIQLQV 791
Score = 76 (31.8 bits), Expect = 2.8e-44, Sum P(5) = 2.8e-44
Identities = 26/127 (20%), Positives = 51/127 (40%)
Query: 718 LCLGWELSNCDGLAYWDDAYGSQKSASSWERFLVLQNESGLCVVRATASGFCDAKDGHHS 777
L W+ S+ A W Y S+ L L E G ++ + G+ +
Sbjct: 871 LVFDWKSSD-QTQAKWLRDYNQNDHLST----LSLSKEQGKVIITVSILGYDQELLRQNK 925
Query: 778 AQLLEISESFLTDAVRLQLVSTLRVNPEYNLLFFNPDAKANLSIAGGSCFLEAAVNDSQV 837
+ ++ S L ++ L L+S++ + P+Y ++ N + GGS N+S++
Sbjct: 926 IRSSDLDTSKLVSSLELHLLSSVVLFPDYYTMYLNDKNHLKIEAIGGSKNFAFTSNNSKI 985
Query: 838 VEVIQAP 844
+ P
Sbjct: 986 ASLSYQP 992
Score = 63 (27.2 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 28/94 (29%), Positives = 46/94 (48%)
Query: 316 VSESILLPWAPGIYQEVELMATGGCAKTSSDYKWFSSDMATVSITAS----GVVQAKKPG 371
VS S+L PG + ++ TGG A D + SSD + V+++ G + A K G
Sbjct: 1155 VSPSVL-HLVPGGHFQIHW--TGG-APIRQDVSFVSSDPSIVNLSGREDLVGELVALKVG 1210
Query: 372 KATVKVVS-IFDSFNYDEIVIEVSTPSSMVMLRN 404
+AT+K ++ I D + +I MV ++N
Sbjct: 1211 EATIKAIAQIVDPITGKKTII--GEDKLMVYVKN 1242
Score = 57 (25.1 bits), Expect = 8.2e-18, Sum P(3) = 8.2e-18
Identities = 21/83 (25%), Positives = 37/83 (44%)
Query: 795 QLVSTLRVNPEYNLLFFNPDAKANLSIAG-------GSCFLEAAVNDSQVVEVIQAPEGL 847
Q+++ + EYNL FF + LS G C ++ + + E ++ E
Sbjct: 1627 QIINNSKKRYEYNLKFFTAGSDIELSQDSTIDQNIKGICTIKESTFATAFFEKVKGKEQY 1686
Query: 848 RCLQLMLSPKGLGTAL---VTVY 867
RC+ + P G+ T+ VT+Y
Sbjct: 1687 RCV---VQPSGVATSSIDKVTLY 1706
Score = 50 (22.7 bits), Expect = 3.8e-29, Sum P(3) = 3.8e-29
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 558 LYLVPRTHVDVLLVGGPEPWEEDVDFIET 586
L+LVP H + GG P +DV F+ +
Sbjct: 1160 LHLVPGGHFQIHWTGGA-PIRQDVSFVSS 1187
Score = 48 (22.0 bits), Expect = 6.1e-29, Sum P(3) = 6.1e-29
Identities = 15/64 (23%), Positives = 29/64 (45%)
Query: 965 IRVEVYAPPRIHPHDIFLVPGASYMLTLKGGPTVGVYVDYTSTDEEIATIHRSSGQLFAI 1024
I + Y P + +I L G++ + GGP +++ S + I + + + +I
Sbjct: 673 ILIFAYPPLKSDQSEILLTLGSTLNVFFSGGPEPW-HLERKSHFQSIVSNLTNEQNVLSI 731
Query: 1025 SPGN 1028
PGN
Sbjct: 732 VPGN 735
Score = 46 (21.3 bits), Expect = 1.7e-24, Sum P(5) = 1.7e-24
Identities = 17/67 (25%), Positives = 31/67 (46%)
Query: 346 DYKWFSSDMATVSITASGVVQAKKPGKATVKVVSIFDSFNYDEIVIEVSTPSSMVMLRNF 405
+Y W SS+ + SG A G+ +KV S N + + V PS + ++
Sbjct: 307 NYIWSSSNSKVGKVDNSGNFMALDLGRTDLKVQHKNMSDNKVQAFVNVVHPSYLA-IKIE 365
Query: 406 PVETVVG 412
P+++ +G
Sbjct: 366 PLKSGLG 372
Score = 45 (20.9 bits), Expect = 3.0e-19, Sum P(4) = 3.0e-19
Identities = 16/62 (25%), Positives = 28/62 (45%)
Query: 1004 YTSTDEEIATIHRSSGQLFAISPGNTTL--IATVFGNGDVVICQAFSSVKVGVPSSVTLN 1061
++S D I + +G+ AI+ G TT+ I VVI + +KV + N
Sbjct: 1573 WSSGDPSILQVDPITGKATAIAAGTTTINYIRNPSSQTQVVISK-IGRIKVDFSDQIINN 1631
Query: 1062 AQ 1063
++
Sbjct: 1632 SK 1633
Score = 44 (20.5 bits), Expect = 5.2e-41, Sum P(5) = 5.2e-41
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 852 LMLSPKGLGTALVTVYDVGLAPPRAASALVQVADVDWIKIMSGEEISLM 900
L LS K G ++TV +G ++ +D+D K++S E+ L+
Sbjct: 898 LSLS-KEQGKVIITVSILGYDQELLRQNKIRSSDLDTSKLVSSLELHLL 945
Score = 39 (18.8 bits), Expect = 7.4e-18, Sum P(5) = 7.4e-18
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 1392 VLHVGGSLDFSVEGFSDQVSGHWFSDNE 1419
++ VG S++ V+GFS +G F +
Sbjct: 1063 MVQVGDSINLIVKGFSQ--NGQQFDSTQ 1088
Score = 39 (18.8 bits), Expect = 7.4e-18, Sum P(5) = 7.4e-18
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 1580 FSILEMDKSSLQLNLTSDSNKTTITILGNTGVEIHWQNQDLLKISPVHKEDIGIGGHAQ 1638
F++ +D+ + L++T + KT+ + T ++I Q ++SP + GGH Q
Sbjct: 1115 FTLKGLDQGLVTLSVTIQNPKTSFSATSKT-IQI--QVFPPFRVSPSVLHLVP-GGHFQ 1169
Score = 38 (18.4 bits), Expect = 2.7e-17, Sum P(4) = 2.7e-17
Identities = 9/37 (24%), Positives = 20/37 (54%)
Query: 777 SAQLLEISESFLTDAVRLQLVSTLRVNPEYNLLFFNP 813
+ +L E + + + + ++ L++NP Y LL+ P
Sbjct: 247 NTKLTEPTYKDIQHSTTISILEPLQLNPSY-LLYVIP 282
>UNIPROTKB|F1NZB4 [details] [associations]
symbol:NUP210 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005635 "nuclear envelope" evidence=IEA]
Pfam:PF02368 GO:GO:0005635 InterPro:IPR003343 InterPro:IPR008964
SMART:SM00635 SUPFAM:SSF49373 GeneTree:ENSGT00390000009491
OMA:EDITTGQ EMBL:AC145911 EMBL:AADN02013943 IPI:IPI00582262
Ensembl:ENSGALT00000008142 Uniprot:F1NZB4
Length = 1888
Score = 267 (99.0 bits), Expect = 3.2e-36, Sum P(4) = 3.2e-36
Identities = 123/504 (24%), Positives = 221/504 (43%)
Query: 567 DVLLVGGPEPW-EEDVDFIETFEIFNGKHNHASDGVHIHVVSGSSKNLYG---VFCQTLG 622
D+L GGP PW +E F + S G+ + S N+ V C++LG
Sbjct: 662 DILFEGGPRPWIQEPSKFFRNITA----EDEESIGLSLFAPPMSRNNIQHWVQVSCKSLG 717
Query: 623 TFELVFKRGNLVGDDHPLPAVAEVSLSVTCSFPASIALLVDEPVNERKVIQTAAQADRSP 682
+ GN +P PAV + C+ P+ + L P+ + + +
Sbjct: 718 EQVIALTVGNNPSMTNPFPAVEPAVVKFICAVPSRLTLT---PIYGSPQLDLSCPLLQQ- 773
Query: 683 GRIRVTPVTVANGQTIRIAAVGIXXXXXXXXXXXXLCLGWE-----LSNCDG-----LAY 732
+V PV+ + +AA L + WE L+N + L
Sbjct: 774 -NKQVVPVSNYRNPVLDLAAYD--QHGSKFDNFSSLSVVWESTKSSLANIEPDMPMELTL 830
Query: 733 WDDAYGSQKSASSWERFLVLQNESGLCVVRATASGFCDAKDGHHSAQLLEIS-ESFL--T 789
DD G Q+ + LV ++SG + ATA+G+ + H A ++ ES L +
Sbjct: 831 KDDGSG-QRKMHGLQTVLV-HHKSGTTAISATATGY---QQSHLKAAKVKTPYESLLPVS 885
Query: 790 DAVRLQLVSTLRVNPEYNLLFFNPDAKANLSIAGGSCFLEAAVNDSQVVEV-IQAPEGLR 848
+ L LV ++V+P ++ +PD +A L I GS + + + VV V ++ +G+
Sbjct: 886 ATIELILVEDVKVSPTDVSIYNHPDVQAELFIKEGSGYFFINTSVASVVSVALEETQGI- 944
Query: 849 CLQLMLSPKGLGTALVTVYDVGLAPPRAASALVQVADVDWIKIMSGEEISLMYTYMD-IR 907
+++ P G+ V V+D+ LA P A A V V+D+ + + +++ + T IR
Sbjct: 945 ---VLVHPLLPGSVTVMVHDLCLAFPAPAKAEVYVSDIQELYVRVVDKVEIGKTVKAFIR 1001
Query: 908 VHIEDH----------IVEL----IDDDATSSPDGGYFS--MSSFKIMAKHLGITTLYVS 951
V ++D +++L + P G ++F + +G T+L S
Sbjct: 1002 V-LDDSKKPFLAKYFAVMDLKLRAASQIVSLVPLGEALDDHTAAFLVHGIAIGQTSLTAS 1060
Query: 952 ARQQSGHEILSQPIRVEVYAPPRIHPHDIFLVPGASYMLTLKGGPTVGVYVDYTSTDEEI 1011
+ G I S P ++EV+ P R+ P + L+ GA +T +GGP + ++ +DE+I
Sbjct: 1061 VADRRGQRINSAPQQIEVFPPFRLLPRKVTLIIGAMIQITSEGGPQPQSNIIFSISDEKI 1120
Query: 1012 ATIHRSSGQLFAISPGNTTLIATV 1035
A+++ S+G + ++ GN T+ V
Sbjct: 1121 ASVN-STGLIRGVAIGNGTVTGVV 1143
Score = 246 (91.7 bits), Expect = 5.3e-34, Sum P(4) = 5.3e-34
Identities = 122/490 (24%), Positives = 220/490 (44%)
Query: 734 DDAYGSQKSASSWERFLVLQNESGLCVVRATASGFCDAKDGHHSAQLLEIS-ESFL--TD 790
DD G Q+ + LV ++SG + ATA+G+ + H A ++ ES L +
Sbjct: 832 DDGSG-QRKMHGLQTVLV-HHKSGTTAISATATGY---QQSHLKAAKVKTPYESLLPVSA 886
Query: 791 AVRLQLVSTLRVNPEYNLLFFNPDAKANLSIAGGSCFLEAAVNDSQVVEV-IQAPEGLRC 849
+ L LV ++V+P ++ +PD +A L I GS + + + VV V ++ +G+
Sbjct: 887 TIELILVEDVKVSPTDVSIYNHPDVQAELFIKEGSGYFFINTSVASVVSVALEETQGI-- 944
Query: 850 LQLMLSPKGLGTALVTVYDVGLAPPRAASALVQVADVD--WIKIMSGEEI---------- 897
+++ P G+ V V+D+ LA P A A V V+D+ +++++ EI
Sbjct: 945 --VLVHPLLPGSVTVMVHDLCLAFPAPAKAEVYVSDIQELYVRVVDKVEIGKTVKAFIRV 1002
Query: 898 ---------SLMYTYMDIRVHIEDHIVELIDDDATSSPDGGYFSMSSFKIMAKHLGITTL 948
+ + MD+++ IV L+ + D ++F + +G T+L
Sbjct: 1003 LDDSKKPFLAKYFAVMDLKLRAASQIVSLVP--LGEALDD---HTAAFLVHGIAIGQTSL 1057
Query: 949 YVSARQQSGHEILSQPIRVEVYAPPRIHPHDIFLVPGASYMLTLKGGPTVGVYVDYTSTD 1008
S + G I S P ++EV+ P R+ P + L+ GA +T +GGP + ++ +D
Sbjct: 1058 TASVADRRGQRINSAPQQIEVFPPFRLLPRKVTLIIGAMIQITSEGGPQPQSNIIFSISD 1117
Query: 1009 EEIATIHRSSGQLFAISPGNTTLIATVFG----NGD-VVICQAFSSVKVGVPSSVTLNAQ 1063
E+IA+++ S+G + ++ GN T+ V G VV+ Q V+V ++V + A
Sbjct: 1118 EKIASVN-STGLIRGVAIGNGTVTGVVQAVDAETGKLVVVSQDKVEVEVVQLTAVRIRAP 1176
Query: 1064 SDQLAVGHEMPIHPL-FPEGDV-FSFYELCRN--YNWTIEDEKILGFWLGDQLHSENQDL 1119
++ G +MP++ + FSF ++W++ L D+
Sbjct: 1177 ITRMKTGTQMPVYVMGITSSQTPFSFGNAVPGLTFHWSVTKRDTL-------------DV 1223
Query: 1120 QSAASGEIQFSNDLDKKELGFIKTLYGRSAGRTDVATTFSC-DFVSDS-YSESRIYSASI 1177
++ S E F L K F +YGR GRT + D ++ Y+ +R S I
Sbjct: 1224 KTRHS-EASFQ--LPAK-YNFAMDVYGRVKGRTGLKVVVKVLDPAANQFYNMARELSDEI 1279
Query: 1178 SLSVVSDLPL 1187
+ V L L
Sbjct: 1280 QIQVFEKLHL 1289
Score = 169 (64.5 bits), Expect = 3.2e-36, Sum P(4) = 3.2e-36
Identities = 86/344 (25%), Positives = 161/344 (46%)
Query: 40 ELENSGAFSDLYVVKGIGIGHEMVSVHLLETEFMHMADS-ILLTVAEAMSIEPPSPVFVL 98
E+E D +V G+ G + + E+ + H+ + + L + E + + P V++L
Sbjct: 196 EMEKVAKQGDTILVSGMKTGSSKLKARIQESVYKHVPPAEVRLLILENILLNPAYDVYLL 255
Query: 99 VGAALQYKLKVIR-GNIPQVVALPSPHHRWSVSNS----------SVAQVDNMMGLTQAL 147
VG +++Y+++ IR G I +++ +PS + + N+ VA++D + A+
Sbjct: 256 VGTSIKYRVQKIRQGKITELM-MPSDQYELQLQNNVLGPEGDPSWPVARLDQETSIVTAM 314
Query: 148 RLGQTAVIV--EDTRVAGHTQV--SSLNVVLPDTLWLYISPLSISGDPVEGTKAIPSVAR 203
+ GQT +I+ + R+ G +++ S++ VV P L + P GD R
Sbjct: 315 QQGQTNLILGHKSIRMQGVSRLPNSTIYVVNPGYLGFAVHP----GD------------R 358
Query: 204 WFVVSGFQYLIQMKVFSQGPGSQEIYITESDDIKLSDNQSECWRTFSMPNDLVLKHGWRN 263
W + +G Y I ++V+ + S ++Y+ SD+I+++ SE + F VLK
Sbjct: 359 WVLETGRFYEITIEVYDKS--SNKVYL--SDNIRINTKLSEEY--FE-----VLKSSLNG 407
Query: 264 S-RILKATSQGLGKLTASLTYF----SGLHDTKEVLKVVQEIMVCDRIKFSLDQTNGVSE 318
S +KA +G + A+LT G+H ++ Q++ + I +S
Sbjct: 408 SYHYVKAIKKGQTIIDAALTSVVDQDGGVHTLPVPVRNQQDVEIYVPIV--------LSP 459
Query: 319 SIL-LPWAP--GIYQEVELMATGGCAKTSSDYKWFSSDMATVSI 359
SIL PW P G+YQ + A GG S + + +ATV++
Sbjct: 460 SILTFPWQPKAGVYQYT-IQAHGGSGNFS--WSCSNQAVATVTV 500
Score = 139 (54.0 bits), Expect = 4.2e-32, Sum P(5) = 4.2e-32
Identities = 61/231 (26%), Positives = 108/231 (46%)
Query: 203 RWFVVSGFQYLIQMKVFSQGPGSQEIYITESDDIKLSDNQSECWRTFSMPNDLVLKHGWR 262
RW + +G Y I ++V+ + S ++Y+ SD+I+++ SE + F VLK
Sbjct: 358 RWVLETGRFYEITIEVYDKS--SNKVYL--SDNIRINTKLSEEY--FE-----VLKSSLN 406
Query: 263 NS-RILKATSQGLGKLTASLTYF----SGLHDTKEVLKVVQEIMVCDRIKFSLDQTNGVS 317
S +KA +G + A+LT G+H ++ Q++ + I +S
Sbjct: 407 GSYHYVKAIKKGQTIIDAALTSVVDQDGGVHTLPVPVRNQQDVEIYVPIV--------LS 458
Query: 318 ESIL-LPWAP--GIYQEVELMATGGCAKTSSDYKWFSSDMATVSITASGVVQAKKP-GKA 373
SIL PW P G+YQ + A GG S ++ W S+ A ++T GV+ G +
Sbjct: 459 PSILTFPWQPKAGVYQYT-IQAHGG----SGNFSWSCSNQAVATVTVKGVMTTGSDIGIS 513
Query: 374 TVKVVSIFDSFNYDEIVIEVSTPSSMVMLRNFPVETVVGSHLQAAVTMKTL 424
++ + + + +Y E+ + V+ PS M + VE VG L+ + + L
Sbjct: 514 IIQAIDVQNPLHYGEMKVYVTEPSGMEFIP-CQVEARVGQVLELPLRINGL 563
Score = 125 (49.1 bits), Expect = 3.2e-36, Sum P(4) = 3.2e-36
Identities = 48/181 (26%), Positives = 83/181 (45%)
Query: 1278 SCVRVAEVAQIRISNRYPLNVIHLAVGAECEIPISYYDALGTPFHEAHNVILYHAETNYH 1337
S +R++ +R N+ L + L +G + ++D G FH +HN +L A TN
Sbjct: 1376 SYLRISMSPILRTQNKEAL--LALPLGVTLTFTVHFHDNSGDTFH-SHNSVLNFA-TNRD 1431
Query: 1338 DVVSINYTLNGSGKIYLKAKQHGRALVQVSMNRSPQKSDYVLVSVGAQLYPQNPVLHVGG 1397
D V I + + ++ G L++V +DYV + V ++P+ + VG
Sbjct: 1432 DFVQIGKGATNNTFV-IRTVNVGLTLLKVWDAEHSGIADYVPLPVQHAIFPELTDVVVGD 1490
Query: 1398 SLDFSVEGFSDQ-VSGHWFSDNESVVHVHMPSGKAEAVGIGSTKVFFECPSMKLQTTVTV 1456
L S + + + G W S + SV+ + +G A A G V++E P + L+T V
Sbjct: 1491 VLCLSTLLTNQEGLPGIWSSSSNSVLQIDSKTGVAVAKDSGVATVYYEIPGL-LKTYREV 1549
Query: 1457 L 1457
L
Sbjct: 1550 L 1550
Score = 72 (30.4 bits), Expect = 9.3e-17, Sum P(3) = 9.3e-17
Identities = 31/109 (28%), Positives = 49/109 (44%)
Query: 891 IMSGEEISLM-YTYMDIRVHIEDHIVELIDDDATSSPDGGYFSMSSFKIMAKHLGITTLY 949
+ +GE + L ++ D+ V +E+ V P + S ++ A+ G TTL
Sbjct: 566 VETGEIVPLSDCSHFDLVVEVENRGV-FRPLQGRLKPTADF--CSGVRVKAETQGYTTLV 622
Query: 950 VSARQQSGHEILSQPIRVEVYAPPR-IHPHDIFLVP-GASYMLTLKGGP 996
VS H LS I + Y P + I P + LV G+S + +GGP
Sbjct: 623 VSYTH--AHVRLSASITIAAYLPLKTIDPPSVALVTLGSSKDILFEGGP 669
Score = 63 (27.2 bits), Expect = 3.9e-26, Sum P(3) = 3.9e-26
Identities = 25/92 (27%), Positives = 40/92 (43%)
Query: 24 PLSDCGGLCGDLDVQIELENSGAFSDLY--------VVKGIGIGHEMVSVHLLETEFMH- 74
PLSDC D+ +E+EN G F L G+ + E L + H
Sbjct: 573 PLSDCS----HFDLVVEVENRGVFRPLQGRLKPTADFCSGVRVKAETQGYTTLVVSYTHA 628
Query: 75 -MADSILLTVAEAM---SIEPPSPVFVLVGAA 102
+ S +T+A + +I+PPS V +G++
Sbjct: 629 HVRLSASITIAAYLPLKTIDPPSVALVTLGSS 660
Score = 58 (25.5 bits), Expect = 2.4e-29, Sum P(4) = 2.4e-29
Identities = 22/98 (22%), Positives = 42/98 (42%)
Query: 1264 IQAKDRSSGRIEIASCVRV-AEVAQIR-ISNRYPLNVIHLAVGAECEIPISYYDALGTPF 1321
+QA D +G++ + S +V EV Q+ + R P+ + G + + + + TPF
Sbjct: 1143 VQAVDAETGKLVVVSQDKVEVEVVQLTAVRIRAPIT--RMKTGTQMPVYVMGITSSQTPF 1200
Query: 1322 HEAHNV--ILYHAETNYHDVVSINYTLNGSGKIYLKAK 1357
+ V + +H D + + T + L AK
Sbjct: 1201 SFGNAVPGLTFHWSVTKRDTLDVK-TRHSEASFQLPAK 1237
Score = 57 (25.1 bits), Expect = 7.6e-10, Sum P(3) = 7.6e-10
Identities = 26/112 (23%), Positives = 50/112 (44%)
Query: 1368 MNRSPQKSDYVLVSVGAQLYPQNPVLHVGGSLDFSVEGFSDQVSGHWFS-DNESVVHVHM 1426
+N +PQ+ + V +L P+ L +G + + EG S FS +E + V+
Sbjct: 1069 INSAPQQIE---VFPPFRLLPRKVTLIIGAMIQITSEGGPQPQSNIIFSISDEKIASVNS 1125
Query: 1427 PSGKAEAVGIGSTKVFFECPSMKLQT-TVTVLSKNIVSIDAPKEVLTNIPYP 1477
+G V IG+ V ++ +T + V+S++ V ++ + I P
Sbjct: 1126 -TGLIRGVAIGNGTVTGVVQAVDAETGKLVVVSQDKVEVEVVQLTAVRIRAP 1176
Score = 51 (23.0 bits), Expect = 3.4e-23, Sum P(5) = 3.4e-23
Identities = 31/126 (24%), Positives = 52/126 (41%)
Query: 320 ILLPWAPGIYQEVELMATGGCAKTSSDYKWFSS----DMATVSITASGVVQAK--KPGKA 373
+LLP+ G L A+ GC + SS +S D + VVQA+ +P +
Sbjct: 34 VLLPFTRGTRVNFTLEASEGCYRWSSTRPEVASIEPADQGERQCSQKAVVQARSSQPTRL 93
Query: 374 TVKVVSIFDSFN-----YDEIV-----IEVSTPSSMVMLRNFPVETVVGSHLQAAVTMKT 423
T ++ D+ D IV I++ + + + L + P+E + + T T
Sbjct: 94 T-SIIFAEDTMTGQVLRCDAIVDIIHGIQIVSTTRELYLEDSPLELKIQALDSEGNTFST 152
Query: 424 LNGAYF 429
L G F
Sbjct: 153 LAGLVF 158
Score = 45 (20.9 bits), Expect = 9.5e-06, Sum P(3) = 9.5e-06
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 835 SQVVEVIQAPEGLRCLQLMLSPKGLGTALVTVYDVGLAPPRAAS 878
+++++ ++ G ++ K G VY V L+ PR +S
Sbjct: 1715 TEILDTLEVKCGSPTVKAFEKEKSYGLPSYIVYTVSLSDPRVSS 1758
Score = 44 (20.5 bits), Expect = 6.5e-28, Sum P(4) = 6.5e-28
Identities = 28/142 (19%), Positives = 56/142 (39%)
Query: 1362 ALVQVSMNRSPQKSDYVLVSVGAQ-LYPQNPVLHVGGSL--DFSVEGFSDQVSGHWFSDN 1418
A++Q++ PQ ++ S+ + + N + G + +V G V ++
Sbjct: 1095 AMIQITSEGGPQPQSNIIFSISDEKIASVNSTGLIRGVAIGNGTVTGVVQAVD----AET 1150
Query: 1419 ESVVHVHMPSGKAEAVGIGSTKVFFECPSMKLQTTVTVLSKNIVSIDAPKEVLTNIPYPT 1478
+V V + E V + + ++ MK T + V I S P +P T
Sbjct: 1151 GKLVVVSQDKVEVEVVQLTAVRIRAPITRMKTGTQMPVYVMGITSSQTPFSFGNAVPGLT 1210
Query: 1479 KGYTFAVRFGDTHKLKALENKA 1500
+ ++V DT +K ++A
Sbjct: 1211 --FHWSVTKRDTLDVKTRHSEA 1230
Score = 43 (20.2 bits), Expect = 3.2e-36, Sum P(4) = 3.2e-36
Identities = 18/49 (36%), Positives = 21/49 (42%)
Query: 477 CSWAHLYASSSGRTMLHATLSKDYQHFDRSFDGPIVLKASSRIAAYPPL 525
CS + A + G T TL Y H + L AS IAAY PL
Sbjct: 606 CSGVRVKAETQGYT----TLVVSYTH------AHVRLSASITIAAYLPL 644
Score = 41 (19.5 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 33/135 (24%), Positives = 59/135 (43%)
Query: 379 SIFDSFNYDEIVIEVSTPSSMVMLR-NFPVETVV---GS-----H-LQAA-VTMKTLNGA 427
S FD+F+ +V E ST SS+ + + P+E + GS H LQ V K+ A
Sbjct: 798 SKFDNFSSLSVVWE-STKSSLANIEPDMPMELTLKDDGSGQRKMHGLQTVLVHHKSGTTA 856
Query: 428 YFYRCDAFSSS----VNWKAGSESFIVLNATKKQPFLDKLGTVEHDISLHGPPCSWAHLY 483
+ S K ES + ++AT + ++ + D+S++ P A L+
Sbjct: 857 ISATATGYQQSHLKAAKVKTPYESLLPVSATIELILVEDVKVSPTDVSIYNHPDVQAELF 916
Query: 484 ASS-SGRTMLHATLS 497
SG ++ +++
Sbjct: 917 IKEGSGYFFINTSVA 931
Score = 40 (19.1 bits), Expect = 6.8e-23, Sum P(5) = 6.8e-23
Identities = 12/57 (21%), Positives = 27/57 (47%)
Query: 471 SLHGPPCSWAHLYASSSGRTMLHATLSKDYQHFDRSFDGPIVLKASSRIAAYPPLIV 527
SL+G S+ ++ A G+T++ A L+ P+ ++ + Y P+++
Sbjct: 404 SLNG---SYHYVKAIKKGQTIIDAALTSVVDQDGGVHTLPVPVRNQQDVEIYVPIVL 457
Score = 38 (18.4 bits), Expect = 4.2e-32, Sum P(5) = 4.2e-32
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 88 SIEPPSPVFVLVGAALQYKLKVIRGNIPQVVALP 121
S+ PP+P +L+ L + NIP+V+ LP
Sbjct: 5 SMAPPAPRALLLLLLLHRLAASSKLNIPKVL-LP 37
>UNIPROTKB|F1SPG4 [details] [associations]
symbol:NUP210 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005635 "nuclear envelope" evidence=IEA] Pfam:PF02368
GO:GO:0005635 InterPro:IPR003343 InterPro:IPR008964 SMART:SM00635
SUPFAM:SSF49373 GeneTree:ENSGT00390000009491 OMA:EDITTGQ
EMBL:AEMK01190886 EMBL:CU928273 EMBL:CU928600
Ensembl:ENSSSCT00000012707 Uniprot:F1SPG4
Length = 1898
Score = 267 (99.0 bits), Expect = 5.9e-36, Sum P(5) = 5.9e-36
Identities = 144/631 (22%), Positives = 258/631 (40%)
Query: 567 DVLLVGGPEPWEEDVDFIETFEIFNGKHNHASDGVHIHVVSGSSKNLYG-----VFCQTL 621
++L GGP PW +E + F + + + + + + Y V CQ L
Sbjct: 671 EMLFEGGPRPW-----VLEPSKFFRNVTSEDKESISLALFGPPASRNYQQHWILVTCQVL 725
Query: 622 GTFELVFKRGNLVGDDHPLPAVAEVSLSVTCSFPASIALLVDEPVNERKVIQTAAQADRS 681
G + GN +P PA+ + C+ P+ + L PV + + +
Sbjct: 726 GEQVIALTVGNKPSITNPFPALEPAVVKFVCAPPSRLTLT---PVYASPQLDLSCPLLQQ 782
Query: 682 PGRIRVTPVTVANGQTIRIAAVGIXXXXXXXXXXXXLCLGWELSN-------CD---GLA 731
+V PV+ + +AA L + WE S D L
Sbjct: 783 --NKQVVPVSSHRNPLLDLAAYD--QQGRRFDNFSSLSIQWESSRPSLASVELDLPLQLV 838
Query: 732 YWDDAYGSQKSASSWERFLVLQNESGLCVVRATASGFCDAKDGH-HSAQLLEISESFL-- 788
DD G QK + V SG + ATA+G+ + H +A + + + L
Sbjct: 839 SRDDGSG-QKKGHGLQAISV-HEASGTTAISATATGY---QQSHLDAAGVRQPHDPLLPV 893
Query: 789 TDAVRLQLVSTLRVNPEYNLLFFNPDAKANLSIAGGSCFLEAAVNDSQVVEVI-QAPEGL 847
+ ++ L LV +RV+PE ++ +P + L I GS + + + V+ V Q G+
Sbjct: 894 SASIELILVEDVRVSPEEVTIYNHPGVQVELHIREGSGYFFLNTSSADVIRVAYQEARGV 953
Query: 848 RCLQLMLSPKGLGTALVTVYDVGLAPPRAASALVQVADVD--WIKIMSGEEISLM---YT 902
+ +L P GT + ++D+ LA P A A V ++D+ +I+++ EI M Y
Sbjct: 954 AMVHPLL-P---GTTTIMIHDLCLAFPAPAKAAVYISDIQELYIRVVDKVEIGKMVKAYV 1009
Query: 903 ----------------YMDIRVHIEDHIVELIDDDATSSPDGGYFSMSSFKIMAKHLGIT 946
+MD+++ IV L+ D +PD Y ++F++ +G T
Sbjct: 1010 RVLDFHKKPFLAKYLAFMDLKLRAASQIVTLVALD--EAPDD-Y--TATFRVHGVAIGQT 1064
Query: 947 TLYVSARQQSGHEILSQPIRVEVYAPPRIHPHDIFLVPGASYMLTLKGGPTVGVYVDYTS 1006
+L S ++G I S P ++EV+ P R+ P + L+ GA+ +T +GGP + +
Sbjct: 1065 SLTASVTDKAGQRINSAPQQIEVFPPFRLIPRKVTLIIGATMQITSEGGPQPQSNILFAV 1124
Query: 1007 TDEEIATIHRSSGQLFAISPGNTTLIATVFG----NGD-VVICQAFSSVKVGVPSSVTLN 1061
++E +A + +G + ++ GN T+ V G V++ Q V+V +V +
Sbjct: 1125 SNESVAVV-TGAGLVRGLAVGNGTVSGVVQAVDAETGKLVIVSQDLVEVEVLRLQAVRIR 1183
Query: 1062 AQSDQLAVGHEMPIHPLFPEGDVFSFYELCRNYNWTIEDEKILGFWLGDQLHSENQDLQS 1121
A ++ G +MP+ + G + N N + G L +D+
Sbjct: 1184 APITRMRTGTQMPV---YVTG-------ITNNQNPFSFGNAVPG--LTFHWSVTKRDILD 1231
Query: 1122 AASGEIQFSNDLDKKELGFIKTLYGRSAGRT 1152
+ S L + F ++GR+ GRT
Sbjct: 1232 IRGRHHEASLRLPS-QYNFAMNVHGRAKGRT 1261
Score = 173 (66.0 bits), Expect = 5.9e-36, Sum P(5) = 5.9e-36
Identities = 95/445 (21%), Positives = 190/445 (42%)
Query: 2 WQLMPETDGSSHHLLHVPLKDSPLSDCGGLCGDLDVQIELENSGAFSDLYVVKGIGIGHE 61
W ++ +T+ + H L+ P + + + E+E + D +V G+ G
Sbjct: 164 WTIVKDTEADGYSDTHNALRILPFLESTYIPPSY-IS-EMEKAAKQGDTILVSGMKTGSS 221
Query: 62 MVSVHLLETEFMHMADS-ILLTVAEAMSIEPPSPVFVLVGAALQYKLKVIR-GNI----- 114
+ + E + ++ + + L + E + + P V+++VG +++YK++ IR G I
Sbjct: 222 KLKARIQEAVYKNVPPAEVRLLILENILLNPAYDVYLMVGTSIRYKVQKIRQGKIAVFGR 281
Query: 115 PQVVALPSPHHRWSVSNSSVAQVDNMMGLTQALRLGQTAVIV-----EDTRVAGHTQVSS 169
P++ ++PS + + ++ V + G A+ T+ + + + V GH +
Sbjct: 282 PEL-SMPSDQYELQLQDN-VWGPEGDPGRPVAVLAQDTSTVTAVQLGQSSLVLGHKSIRM 339
Query: 170 LNVV-LPDTLWLYISPLSISGDPVEGTKAIPSVARWFVVSGFQYLIQMKVFSQGPGSQEI 228
LP++ + P G V+ P RW + +G Y + ++V + +I
Sbjct: 340 QGASRLPNSTVYVVEP-GYLGFTVQ-----PG-GRWVLETGRLYEVTVEVLDKS--GNKI 390
Query: 229 YITESDDIKLSDN-QSECWRTFSMPNDLVLKHGWRNSRILKATSQGLGKLTASLTYF--- 284
Y+ SD+I++ +E + + + H ++AT +G + A+LT
Sbjct: 391 YL--SDNIRIETTLPAEFFEVLASSQNGSHHH-------VRATKKGQTAIEAALTSVVDQ 441
Query: 285 -SGLHDTKEVLKVVQEIMVCDRIKFSLDQTNGVSESIL-LPWAP--GIYQEVELMATGGC 340
G+H + + QE+ + + +L SIL PW P G YQ + A GG
Sbjct: 442 DGGVHTLRVPMWNQQEVEI--HVPITL------YPSILTFPWQPKTGAYQYT-IKAHGG- 491
Query: 341 AKTSSDYKWFSSDMATVSITASGVVQAKKP-GKATVKVVSIFDSFNYDEIVIEVSTPSSM 399
S ++ W SS ++T GV+ G + ++ + + ++ E+ + V PS M
Sbjct: 492 ---SGNFTWSSSSSMVATVTVKGVMTTGSDIGLSVIQAHDVQNPLHFGEMKVYVIEPSGM 548
Query: 400 VMLRNFPVETVVGSHLQAAVTMKTL 424
PVE VG L+ + + L
Sbjct: 549 EFAP-CPVEARVGQTLELPLRISGL 572
Score = 112 (44.5 bits), Expect = 5.9e-36, Sum P(5) = 5.9e-36
Identities = 48/189 (25%), Positives = 84/189 (44%)
Query: 1264 IQAKDRSSGRIEIASCVRVAEVAQIRISNRYPLNVIH------LAVGAECEIPISYYDAL 1317
+ A++ I V+V+ V+ +RIS L+ + L +G + ++D
Sbjct: 1363 VTAQEAFGANQTIIVAVKVSPVSYLRISMGPALHTQNKEALAALPLGVTVTFTVHFHDNS 1422
Query: 1318 GTPFHEAHNVILYHAETNYHDVVSINYTLNGSGKIYLKAKQHGRALVQVSMNRSPQKSDY 1377
G FH AHN +L A TN + V I + + ++ G L++ + SD+
Sbjct: 1423 GDVFH-AHNSVLNFA-TNRDEFVQIGKGATNNTCV-VRTVSVGLTLLRAWDSEHGGLSDF 1479
Query: 1378 VLVSVGAQLYPQ-NPVLHVGGSLDFSVEGFSDQ-VSGHWFSDNESVVHVHMPSGKAEAVG 1435
V + V + P+ + + VG L + S + V G W S S++HV +G A A
Sbjct: 1480 VPLPVLQAISPELSGAVVVGDVLCLTTVLVSPEGVPGIWSSSASSILHVDPKTGVAMARE 1539
Query: 1436 IGSTKVFFE 1444
GS +++E
Sbjct: 1540 AGSVTIYYE 1548
Score = 52 (23.4 bits), Expect = 5.9e-36, Sum P(5) = 5.9e-36
Identities = 21/53 (39%), Positives = 24/53 (45%)
Query: 474 GPP-CSWAHLYASSSGRTMLHATLSKDYQHFDRSFDGPIVLKASSRIAAYPPL 525
GP CS + A + G H TL Y+H G I L A IAAY PL
Sbjct: 611 GPEHCSGVTVRAEAQG----HTTLLVTYKH------GHIHLSARITIAAYLPL 653
Score = 52 (23.4 bits), Expect = 9.7e-08, Sum P(3) = 9.7e-08
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 836 QVVEVIQAPEGLRCLQLMLSPKGLGTALVTVYDVGLAPPRAAS 878
+V+E ++ G + + K LG Y VG++ P A S
Sbjct: 1726 EVLENLEVKSGSPAVLAFVKEKSLGLPSFITYTVGVSDPAAGS 1768
Score = 49 (22.3 bits), Expect = 2.2e-23, Sum P(5) = 2.2e-23
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 32 CGDLDVQIELENSGAFSDL 50
C D+ +E+EN G F L
Sbjct: 586 CSHFDLAVEVENQGVFQPL 604
Score = 46 (21.3 bits), Expect = 5.9e-36, Sum P(5) = 5.9e-36
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 1641 VSVLRTKKFKDKIIFTLPANGQRVEVDVNFEPGQREESNRIFAS 1684
+++ RT I P++G+++ +V F PG + I S
Sbjct: 1668 LNMRRTALLVTASILGSPSSGEQIGAEVPFSPGLYADQAEILLS 1711
Score = 44 (20.5 bits), Expect = 1.1e-22, Sum P(6) = 1.1e-22
Identities = 15/57 (26%), Positives = 24/57 (42%)
Query: 320 ILLPWAPGIYQEVELMATGGCAKTSSDYKWFSSDMATVSITASGVVQAKKPGKATVK 376
+LLP+ L A+ GC Y+W S+ I G+ + + KA V+
Sbjct: 38 VLLPFTRATRVNFTLEASEGC------YRWSSTRPEVAGIEPLGLEEQQCSQKAVVQ 88
Score = 43 (20.2 bits), Expect = 1.1e-22, Sum P(6) = 1.1e-22
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 426 GAYFYRCDAFSSSVNWKAGSESFIVLNATKK 456
GAY Y A S N+ S S +V T K
Sbjct: 480 GAYQYTIKAHGGSGNFTWSSSSSMVATVTVK 510
Score = 40 (19.1 bits), Expect = 2.4e-06, Sum P(4) = 2.4e-06
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 1570 ASASALFVGGFSILEMDKSSLQLNLTS-DSNKTTITILG---NTGVEIHW 1615
+S LF GG ++ S N+TS D ++ + G + + HW
Sbjct: 668 SSKEMLFEGGPRPWVLEPSKFFRNVTSEDKESISLALFGPPASRNYQQHW 717
>MGI|MGI:1924845 [details] [associations]
symbol:Nup210l "nucleoporin 210-like" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] MGI:MGI:1924845 GO:GO:0016021
CTD:91181 eggNOG:NOG315446 HOGENOM:HOG000115312 HOVERGEN:HBG082098
KO:K14314 OMA:IKYRVAK OrthoDB:EOG4W9J31 InterPro:IPR003343
InterPro:IPR008964 SMART:SM00635 SUPFAM:SSF49373 EMBL:AC121963
EMBL:AC145082 EMBL:AK019752 IPI:IPI00356451 RefSeq:NP_084213.1
UniGene:Mm.159949 ProteinModelPortal:Q9D2F7 SMR:Q9D2F7
PhosphoSite:Q9D2F7 PaxDb:Q9D2F7 PRIDE:Q9D2F7
Ensembl:ENSMUST00000029548 GeneID:77595 KEGG:mmu:77595
UCSC:uc012css.1 GeneTree:ENSGT00390000009491 InParanoid:Q9D2F7
NextBio:347178 Bgee:Q9D2F7 CleanEx:MM_NUP210L Genevestigator:Q9D2F7
GermOnline:ENSMUSG00000027939 Uniprot:Q9D2F7
Length = 1881
Score = 251 (93.4 bits), Expect = 2.0e-35, Sum P(3) = 2.0e-35
Identities = 150/658 (22%), Positives = 268/658 (40%)
Query: 567 DVLLVGGPEPW--EEDVDFIETFEIFNGKHNHASDGVHIHVVSGSSKNLYGVFCQTLGTF 624
+++ GGP PW E F+E + + ++ V + ++ +Y V C LG
Sbjct: 668 EMVFEGGPHPWILEPSRFFLE-LSMEKAEAIRVAE-VRLPAKRKQNQYVYRVLCLELGEQ 725
Query: 625 ELVFKRGNLVGDDHPLPAVAEVSLSVTCSFPASIALLVDEPVNERKVIQTAAQADRSPGR 684
L F+ GN G +P P+V +V + C+ PAS +LV Q +
Sbjct: 726 VLTFRIGNHPGVLNPSPSVEKVQVRFICAHPAS--MLVTPMYKAPSGTQPCPLPQYNK-- 781
Query: 685 IRVTPVTVANGQTIRIAAVGIXXXXXXXXXXXXLCLGWELSNCDGLAYWDDAY------- 737
++ PV+ + +A L L W+ SN + LA+++D+
Sbjct: 782 -QLIPVSSLRDSVLELAV--FDQHGRKFDNFSSLMLEWKSSN-ETLAHFEDSKSVEMVAR 837
Query: 738 --GSQKSASSWERFLVLQNESGLCVVRATASGFCDAKDGHHSAQLLEISESFLTDAVRLQ 795
GS ++ + L + G ++ +G+ G S + IS S + V L
Sbjct: 838 DDGSGQTRLHGHQILKVHQMKGTVLIGVNFAGY----SGKKSPK--GISNSPRSAGVELI 891
Query: 796 LVSTLRVNPEYNLLFFNPDAKANLSIAGGSCFLEAAVNDS-QVVEVIQAPEGLRCLQLML 854
LV + V PE ++ +PD K ++ GS + +N S Q + I E +QL+
Sbjct: 892 LVEDVTVQPENATIYNHPDVKEIFNLVEGSGYF--LINSSEQDIVTITYREAESSVQLV- 948
Query: 855 SPKGLGTALVTVYDVGLAPPRAASALVQVADV-----DWI-KIMSGEEISLM-------- 900
P G + VYD+ LA A A ++V+D+ D I K+ G+ + ++
Sbjct: 949 -PAHPGFLTLEVYDLCLAYLGPAVAQIRVSDIQELELDLIDKVEIGKTVLVVVRVLGSSK 1007
Query: 901 -------YTYMDIRVHIEDHIVELIDDDATSSPDGGYFSMSSFKIMAKHLGITTLYVSAR 953
+ M++R+ + IV L D +S ++ + A +G TTL A
Sbjct: 1008 HPFRNKYFRNMEVRLQLASAIVTL-----RLMEDQDEYS-ENYMLRAVTVGQTTLVAIAT 1061
Query: 954 QQSGHEILSQPIRVEVYAPPRIHPHDIFLVPGASYMLTLKGGPTVGVYVDYTSTDEEIAT 1013
+ G + S P +EV+ P R+ P + L+ + +GGP + ++ +++ +A
Sbjct: 1062 DRMGKKFTSAPRHIEVFPPFRLIPEKMTLIATNMMQIMSEGGPQPQSIIHFSISNQTVAV 1121
Query: 1014 IHRSSGQLFAISPGNTTLIATVFG-NGD----VVICQAFSSVKVGVPSSVTLNAQSDQLA 1068
++R GQ+ S G L T+ N D +V Q ++V +V + A + +L
Sbjct: 1122 VNRR-GQVTGKSVGTAVLHGTIQTVNEDTGKVIVFSQDEVQIEVVQLQAVRILAAATRLV 1180
Query: 1069 VGHEMPIHPLFPEGDV--FSFYELCR--NYNWTIEDEKILGFWLGDQLHSENQDLQSAAS 1124
EMP++ + FSF ++W++ +L HSE LQ A
Sbjct: 1181 TATEMPVYVMGVTSTQTPFSFSNASPLLTFHWSMSKRDVLDLV---PRHSE-VFLQLPA- 1235
Query: 1125 GEIQFSNDLDKKELGFIKTLYGRSAGRTDVATTFSCDFVSDSYSESRIYSASISLSVV 1182
E F ++ ++AGRT + T + S E + S + ++
Sbjct: 1236 ------------ENNFAMVVHTKAAGRTTIKVTVRSENSSSGQLEGNLLELSDEIQIL 1281
Score = 157 (60.3 bits), Expect = 2.0e-35, Sum P(3) = 2.0e-35
Identities = 90/382 (23%), Positives = 166/382 (43%)
Query: 36 DVQIELENSGAFSDLYVVKGIGIGHEMVSVHLLETEFMHMADSIL-LTVAEAMSIEPPSP 94
D IE+E D+ +V G+ G +V V + E + +A +++ L V E + + P
Sbjct: 198 DYIIEMEKQERQGDVILVSGMRTGAAVVKVRIYEPFYKKVAAALIRLLVLENIFLIPSHD 257
Query: 95 VFVLVGAALQYKL-KVIRGNIPQVVALPSPH-------HRWS---VSNSSVAQVDNMMGL 143
++LVGA ++Y++ K+++G + +V P H HR + + + SVA +D +
Sbjct: 258 TYLLVGAYIKYRVAKMVQGRMTEV-NFPLEHYTLELQDHRLTNGGLPSKSVALLDEKTAM 316
Query: 144 TQALRLGQTAVIVEDTRVAGHTQVSSLNVVLPDTLWLYISPLSISGDPVEGTKAIPSVAR 203
A++LGQT ++ V H + S LP++ +Y+ G + P R
Sbjct: 317 VTAVQLGQTNLVFVHKNV--HMRSVS---GLPNST-IYVVEPGFLGFSIH-----PG-GR 364
Query: 204 WFVVSGFQYLIQMKVFSQGPGSQEIYITESDDIKLSDNQSECWRTFSMPNDLVLKHGWRN 263
W + G Y+I ++VF + S +YI SD++K++ S+ + L +G +
Sbjct: 365 WSLEVGQVYVITVEVFDKS--STRVYI--SDNLKITFQFSKEY----FEEQLSTSNG--S 414
Query: 264 SRILKATSQGLGKLTASLTYFSGLHDTKEVLKVVQEIMVCDRIKFSLDQTNGVSESIL-L 322
++KA G+ + A+LT S L + +I +K + S L
Sbjct: 415 YHVVKALKDGVVVINATLT--SSLQERNSSQPKTYQISHQQEVKIYFPIQ--LKPSFLAF 470
Query: 323 PWAP-GIYQEVELMATGGCAK-TSSDYKWFSSDMATVSITASGVVQAKKPGKATVKVVSI 380
P P GI + GG T S + + T + +G V+ G +T+ +
Sbjct: 471 PHHPLGISNRFTVQVEGGSGNFTWSSSNETVAMVTTKGVVTAGQVR----GNSTILARDV 526
Query: 381 FDSFNYDEIVIEVSTPSSMVML 402
+ +I + V + M +L
Sbjct: 527 QNPSRSGDIKVYVMKLNKMELL 548
Score = 137 (53.3 bits), Expect = 2.0e-35, Sum P(3) = 2.0e-35
Identities = 58/226 (25%), Positives = 94/226 (41%)
Query: 1280 VRVAEVAQIRISNRYPL-------NVIHLAVGAECEIPISYYDALGTPFHEAHNVILYHA 1332
V+VA V +R+S+ YP + +G + +Y+ +G FH HN LY A
Sbjct: 1369 VQVAPVTYLRLSS-YPKLYTAQGRTLSAFPLGMSLTFIVEFYNNIGEKFH-THNTRLYMA 1426
Query: 1333 ETNYHDVVSINYTLNGSGKIYLKAKQHGRALVQVSMNRSPQKSDYVLVSVGAQLYPQNPV 1392
N D++ I N + +A G +V + R P +DY+ V+V + P +
Sbjct: 1427 -LNRDDLLLIGPG-NRNYTYMAQAVNKGVTVVGLWDQRHPGMADYIPVAVEHAIEPDTKL 1484
Query: 1393 LHVGGSLDFSVEGFSDQVS-GHWFSDNESVVHVHMPSGKAEAVGIGSTKVFFECPSM-KL 1450
+ VG + FS + + G W ++V +G A G+ +F P + K
Sbjct: 1485 IFVGDVICFSTQLVNQHGEPGVWMISTNNIVQTDTATGVGVARNPGTATIFHNIPGVVKT 1544
Query: 1451 --QTTVTVLSKNIVSIDAPKEVLTNIPYPTKGYTFAVRFGDTHKLK 1494
+ V S+ +S D K LTN P T + + G LK
Sbjct: 1545 FREVVVNASSRLTLSYDL-KTYLTNTPNAT-AFKLFISTGRNVNLK 1588
Score = 105 (42.0 bits), Expect = 4.9e-30, Sum P(3) = 4.9e-30
Identities = 62/280 (22%), Positives = 115/280 (41%)
Query: 227 EIYITESDDIKLSDNQSECWRTFSMPNDLVLKHGWRNSRILKATSQGLGKLTASLTYFSG 286
E++ S + +SDN ++ + L + ++KA G+ + A+LT S
Sbjct: 378 EVFDKSSTRVYISDNLKITFQFSKEYFEEQLSTSNGSYHVVKALKDGVVVINATLT--SS 435
Query: 287 LHDTKEVLKVVQEIMVCDRIKFSLDQTNGVSESIL-LPWAP-GIYQEVELMATGGCAKTS 344
L + +I +K + S L P P GI + GG S
Sbjct: 436 LQERNSSQPKTYQISHQQEVKIYFPIQ--LKPSFLAFPHHPLGISNRFTVQVEGG----S 489
Query: 345 SDYKWFSSDMATVSITASGVVQAKKP-GKATVKVVSIFDSFNYDEIVIEVSTPSSMVMLR 403
++ W SS+ +T GVV A + G +T+ + + +I + V + M +L
Sbjct: 490 GNFTWSSSNETVAMVTTKGVVTAGQVRGNSTILARDVQNPSRSGDIKVYVMKLNKMELLP 549
Query: 404 NFPVETVVGSHLQAAVTMKTLNGAYFYRCDAFSSSVNWKAGSESFIVLNATKKQPF-LDK 462
F + +G ++ + M +N AF+ S + LN+ K+ F L K
Sbjct: 550 -FQADVEIGQIIEVPIAMYHVN-TETKEAIAFTDC------SHLPLDLNSDKQGVFTLFK 601
Query: 463 LGTVEHDISLHGPPCSWAHLYASSSGRTMLHATLSKDYQH 502
G ++ ++H CS H+ A+S G T++ +++ +H
Sbjct: 602 EG-IQKPGAMH---CSSVHIAATSPGHTLVTVSVTGHEEH 637
Score = 63 (27.2 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 78/388 (20%), Positives = 150/388 (38%)
Query: 41 LENSGAFSDLYVVKGIGIGHEMVSVHLLETEFMHMADSILLTVAEAMSIEPPSPVFVLVG 100
+E+ +S+ Y+++ + +G ++ + T+ M + + + PP F L+
Sbjct: 1034 MEDQDEYSENYMLRAVTVGQ--TTLVAIATDRMGKK---FTSAPRHIEVFPP---FRLIP 1085
Query: 101 AALQYKLKVIRGNIPQVVAL--PSPHH--RWSVSNSSVAQVDNMMGLTQALRLGQTAVIV 156
K+ +I N+ Q+++ P P +S+SN +VA V N G +G TAV+
Sbjct: 1086 E----KMTLIATNMMQIMSEGGPQPQSIIHFSISNQTVAVV-NRRGQVTGKSVG-TAVL- 1138
Query: 157 EDTRVAGHTQVSSLNVVLPDTLWLYISPLSISGDPVEGTKAIPSVARWFVVSGFQYLIQM 216
T + + V D + + + L T+ + + V G
Sbjct: 1139 HGTIQTVNEDTGKVIVFSQDEVQIEVVQLQAVRILAAATRLVTATEMPVYVMGVTSTQTP 1198
Query: 217 KVFSQGPGSQEIY--ITESDDIKLSDNQSECWRTFSMPNDLVLK-HGWRNSRILKATSQG 273
FS + +++ D + L SE + N+ + H KA +
Sbjct: 1199 FSFSNASPLLTFHWSMSKRDVLDLVPRHSEVFLQLPAENNFAMVVH-------TKAAGRT 1251
Query: 274 LGKLTASLTYFSGLHDTKEVLKVVQEIMVCDRIKFSLDQTNGVSESILLPWAPGIYQEVE 333
K+T S +L++ EI + K L N E IL+P + ++
Sbjct: 1252 TIKVTVRSENSSSGQLEGNLLELSDEIQILVFEKLQLFYANCQPEQILMPMNSQL--KLH 1309
Query: 334 LMATGGCAKTSSDYKWFSSDMATVSITASGVVQAKK-PGKATVKVVSIFDSFNYDEIVIE 392
G +S K F + + + G++++ G A ++V SI + F ++ I
Sbjct: 1310 TNREGAAFVSSRVLKCFPNS-SVIEEDGGGLLRSGSIAGTAVLEVTSI-EPFGVNQTTIT 1367
Query: 393 -VST-PSSMVMLRNFP-VETVVGSHLQA 417
V P + + L ++P + T G L A
Sbjct: 1368 GVQVAPVTYLRLSSYPKLYTAQGRTLSA 1395
Score = 55 (24.4 bits), Expect = 5.3e-15, Sum P(3) = 5.3e-15
Identities = 28/97 (28%), Positives = 42/97 (43%)
Query: 999 GVYVDYTSTDEEIATIHRSSGQLFAISPGNTTLIATVFGNGD----VVICQAFSSVKVGV 1054
GV+ + ++ +H SS + A SPG+T + +V G+ + A+ +K
Sbjct: 595 GVFTLFKEGIQKPGAMHCSSVHIAATSPGHTLVTVSVTGHEEHAWSSATFAAYEPLKALN 654
Query: 1055 PSSVTLNA-QSDQLAVGHEMPIHPLFPEGDVFSFYEL 1090
P V L QS + V P HP E F F EL
Sbjct: 655 PVDVALVTWQSVKEMVFEGGP-HPWILEPSRF-FLEL 689
Score = 46 (21.3 bits), Expect = 4.4e-14, Sum P(3) = 4.4e-14
Identities = 17/69 (24%), Positives = 33/69 (47%)
Query: 839 EVIQAPEGLRCLQLMLSPKGLGTALVTVYDVGLAPPRAASALVQVADVDWIKIMSGEEIS 898
E IQ P + C + ++ G LVTV G +SA A + +K ++ +++
Sbjct: 602 EGIQKPGAMHCSSVHIAATSPGHTLVTVSVTGHEEHAWSSATF--AAYEPLKALNPVDVA 659
Query: 899 LMYTYMDIR 907
L+ T+ ++
Sbjct: 660 LV-TWQSVK 667
Score = 40 (19.1 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 556 DKLYLVPRTHVDVLLVGGPEP 576
+K+ L+ + ++ GGP+P
Sbjct: 1086 EKMTLIATNMMQIMSEGGPQP 1106
>ZFIN|ZDB-GENE-050208-132 [details] [associations]
symbol:nup210 "nucleoporin 210" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF02368 ZFIN:ZDB-GENE-050208-132
InterPro:IPR003343 InterPro:IPR008964 SMART:SM00635 SUPFAM:SSF49373
GeneTree:ENSGT00390000009491 EMBL:CABZ01046270 EMBL:CABZ01046271
EMBL:CABZ01046272 EMBL:CABZ01046273 EMBL:CABZ01046274
IPI:IPI00962432 Ensembl:ENSDART00000092389 Bgee:F1QC46
Uniprot:F1QC46
Length = 1869
Score = 226 (84.6 bits), Expect = 1.3e-34, Sum P(5) = 1.3e-34
Identities = 114/499 (22%), Positives = 209/499 (41%)
Query: 567 DVLLVGGPEPWE-EDVDFIETFEIFNGKHNHASDGVHIHVVSGSSKNLYGVFCQTLGTFE 625
D+ GGP PW E F + H+ S + S +L C+ LG
Sbjct: 656 DMTFEGGPRPWVLEPSKFFRNLTAED--HSSVSLALFGPAARTYSTHLVRATCRALGEQV 713
Query: 626 LVFKRGNLVGDDHPLPAVAEVSLSVTCSFPASIALLVDEPVNERKVIQTAAQADRSPGRI 685
L GN +P PAV + C+ P+ + L P+ + + +
Sbjct: 714 LAVTVGNQPTVTNPFPAVEPAVVKFVCAPPSRLTLT---PIYVNPQLDVSCPLLQQ--NK 768
Query: 686 RVTPVTVANGQTIRIAAVGIXXXXXXXXXXXXLCLGWELSNCDGLAYWDDAY-------- 737
+V PV+ + + +AA L + WE S LA +
Sbjct: 769 QVVPVSNYHNPELDVAA--FDEQGRKFDNFSSLSMIWESSKVS-LASIEPTMPMQLHVHE 825
Query: 738 -GSQKSASSWERFLVLQNESGLCVVRATASGFCDAKDGH-HSAQLLEISE--SFLTDAVR 793
QK + LV +ESG+ + TA G+ + H +A +L + S ++ +
Sbjct: 826 DNKQKKLHGHQTVLV-HHESGVAGITVTAVGY---QTSHLEAAMVLSGFDPLSAVSATLD 881
Query: 794 LQLVSTLRVNPEYNLLFFNPDAKANLSIAGGSCFLEAAVNDSQVVEV-IQAPEGLRCLQL 852
L LV +RV P+ ++ +PD A L++ GS + + V +V Q +G+ Q+
Sbjct: 882 LLLVEDVRVTPDTVTIYNHPDVAAALTLQQGSGYFFVNASVGGVADVTFQESQGIA--QV 939
Query: 853 MLSPKGLGTALVTVYDVGLAPPRAASALVQVADV--DWIKIMSGEEISL-MYTYMDI--- 906
+ P G V V+D+ L P A A V ++D+ +++++ EI + Y+ +
Sbjct: 940 V--PLQAGVLQVMVHDLCLTFPSPAKATVHISDILEVYVRVVDKVEIGKSVKAYVRVLDG 997
Query: 907 --RVHIEDHI-VELIDDDATSS-------PDGGYFSMSSFKIMAKHLGITTLYVSARQQS 956
+ + + V + A SS PD ++F + +G T++ ++
Sbjct: 998 NKKPFLSKYFSVMNLKLRAASSIISLQTLPDSSEEDTATFLVKGLVIGQTSVSAFIIDKN 1057
Query: 957 GHEILSQPIRVEVYAPPRIHPHDIFLVPGASYMLTLKGGPTVGVYVDYTSTDEEIATIHR 1016
G +I S P ++EV+ P R+ P + ++ GA +T +GGP + ++ + + IA+++
Sbjct: 1058 GRKITSAPQQIEVFPPFRLLPRKVTVIVGAMMQITSEGGPQPQSNILFSLSHQHIASVN- 1116
Query: 1017 SSGQLFAISPGNTTLIATV 1035
S G + ++ GN T+ V
Sbjct: 1117 SLGHVQGLAVGNMTVTGVV 1135
Score = 221 (82.9 bits), Expect = 4.4e-34, Sum P(5) = 4.4e-34
Identities = 104/447 (23%), Positives = 201/447 (44%)
Query: 740 QKSASSWERFLVLQNESGLCVVRATASGFCDAKDGH-HSAQLLEISE--SFLTDAVRLQL 796
QK + LV +ESG+ + TA G+ + H +A +L + S ++ + L L
Sbjct: 829 QKKLHGHQTVLV-HHESGVAGITVTAVGY---QTSHLEAAMVLSGFDPLSAVSATLDLLL 884
Query: 797 VSTLRVNPEYNLLFFNPDAKANLSIAGGSCFLEAAVNDSQVVEV-IQAPEGLRCLQLMLS 855
V +RV P+ ++ +PD A L++ GS + + V +V Q +G+ Q++
Sbjct: 885 VEDVRVTPDTVTIYNHPDVAAALTLQQGSGYFFVNASVGGVADVTFQESQGIA--QVV-- 940
Query: 856 PKGLGTALVTVYDVGLAPPRAASALVQVAD--------VD----------WIKIMSGEE- 896
P G V V+D+ L P A A V ++D VD +++++ G +
Sbjct: 941 PLQAGVLQVMVHDLCLTFPSPAKATVHISDILEVYVRVVDKVEIGKSVKAYVRVLDGNKK 1000
Query: 897 --ISLMYTYMDIRVHIEDHIVELIDDDATSSPDGGYFSMSSFKIMAKHLGITTLYVSARQ 954
+S ++ M++++ I+ L + PD ++F + +G T++
Sbjct: 1001 PFLSKYFSVMNLKLRAASSIISL-----QTLPDSSEEDTATFLVKGLVIGQTSVSAFIID 1055
Query: 955 QSGHEILSQPIRVEVYAPPRIHPHDIFLVPGASYMLTLKGGPTVGVYVDYTSTDEEIATI 1014
++G +I S P ++EV+ P R+ P + ++ GA +T +GGP + ++ + + IA++
Sbjct: 1056 KNGRKITSAPQQIEVFPPFRLLPRKVTVIVGAMMQITSEGGPQPQSNILFSLSHQHIASV 1115
Query: 1015 HRSSGQLFAISPGNTTLIATVFG----NGD-VVICQAFSSVKVGVPSSVTLNAQSDQLAV 1069
+ S G + ++ GN T+ V G VV+ + V+V ++ + A ++
Sbjct: 1116 N-SLGHVQGLAVGNMTVTGVVQAVDTETGKLVVVSKDQVDVEVVQLKAIRIRAPITRMKT 1174
Query: 1070 GHEMPIHP--LFPEGDVFSFYELCRN--YNWTIEDEKILGFWLGDQLHSENQDLQSAASG 1125
G MP++ L F+F ++W++ IL +H+ + A
Sbjct: 1175 GTLMPVYVMGLTSSQTPFAFGNALPGLTFHWSVTKRDIL------DVHTRH------AEA 1222
Query: 1126 EIQFSNDLDKKELGFIKTLYGRSAGRT 1152
+Q S E F +++GRS GRT
Sbjct: 1223 SVQLS-----AEHNFAMSVFGRSKGRT 1244
Score = 176 (67.0 bits), Expect = 1.3e-34, Sum P(5) = 1.3e-34
Identities = 84/331 (25%), Positives = 149/331 (45%)
Query: 40 ELENSGAFSDLYVVKGIGIGHEMVSVHLLETEFMHM-ADSILLTVAEAMSIEPPSPVFVL 98
E+E G D+ +V GI GH + + E+ + + A + L + E + + P V++L
Sbjct: 193 EMERVGHQGDIVLVSGIKTGHAKLKAKIQESIYKDVGAAEVRLLILENILLSPAYDVYLL 252
Query: 99 VGAALQYKLKVIR-GNIPQVVALPSPHHRWSVSNSSVAQVDNMMGLTQALRLGQTAVIVE 157
G +++YK++ IR G I ++ ++P + + NS+VA N+ T L Q++ V
Sbjct: 253 AGTSIKYKVQKIRQGKITEL-SMPCDQYELQLQNSAVAPNGNLN--TPVANLDQSSSTVF 309
Query: 158 DTRVAGHTQV--SSLNVVLPDTLWLYISPLSISGDPVEGTKAIPSVARWFVVSGFQYLIQ 215
+ GHT + ++ + L S + + K P RW + +G +Y I
Sbjct: 310 ALQ-HGHTNILLDHKSLGMQGASRLPNSTIYVVEPGYLAFKIHPE-DRWVLETGRKYEIF 367
Query: 216 MKVFSQGPGSQEIYITESDDIKLSDNQSECWRTFSMPNDLVLKHGWRNS-RILKATSQGL 274
++VF + +IY+ SD+I++ TF VL+ S +KA QG
Sbjct: 368 IEVFDKS--GHKIYL--SDNIRIET-------TFPAEYFEVLESSVNGSYHHVKAVKQGQ 416
Query: 275 ----GKLTASLTYFSGLHDTKEVLKVVQEIMVCDRIKFSLDQTNGVSESILLPWAP--GI 328
G L A + +H ++ Q++ + D I T + + PW P G
Sbjct: 417 TVIDGTLKAVVDQAGSVHALSVPVRNEQDVEIYDPIVL----TPAI---LTFPWQPKEGA 469
Query: 329 YQEVELMATGGCAKTSSDYKWFSSDMATVSI 359
YQ + + ATGG S + +S +ATV++
Sbjct: 470 YQYI-IKATGGSGNFS--WSSTNSAVATVTV 497
Score = 140 (54.3 bits), Expect = 1.3e-34, Sum P(5) = 1.3e-34
Identities = 61/244 (25%), Positives = 115/244 (47%)
Query: 1224 GSIVYSLLKFCSEKNEAASKDDIS-IDGDTIKTTSSNHLACIQAKDRSSGRIEIASCVRV 1282
GS++Y +L C ++ DD + ++ T+S I A++ + V+V
Sbjct: 1309 GSLLYRVLD-CPDRAALVQVDDKGHLTSGSMTGTASLQ---ISAQETFGVNQTVIIAVKV 1364
Query: 1283 AEVAQIRISNR---YPLN---VIHLAVGAECEIPISYYDALGTPFHEAHNVILYHAETNY 1336
V+ +R+S Y N V + +GA + ++D+ G H +HN +L + TN
Sbjct: 1365 VPVSYLRLSTSPVIYTSNRETVSAIPLGAILTFTVHFHDSTGETLH-SHNSMLSFS-TNR 1422
Query: 1337 HDVVSINYTLNGSGKIYLKAKQHGRALVQVSMNRSPQKSDYVLVSVGAQLYP-QNPVLHV 1395
D+V ++ L+ +G + ++ G L+ V + +D++ + V ++P Q L V
Sbjct: 1423 DDLVQVSKGLS-NGTLTMRTVNVGLTLLGVWDSEQAGLADFLALPVQHAIHPAQAQRLVV 1481
Query: 1396 GGSLDFSVEGFSDQVS--GHWFSDNESVVHVHMPSGKAEAVGIGSTKVFFECPSMKLQTT 1453
G + FS + F +Q G W S + +++ V +G A A G+ V++E + L+T
Sbjct: 1482 GDVVCFSAQ-FINQAGALGVWSSSSSALLEVEPRTGAAVARDKGTVTVYYEIAGL-LRTY 1539
Query: 1454 VTVL 1457
VL
Sbjct: 1540 REVL 1543
Score = 119 (46.9 bits), Expect = 8.1e-29, Sum P(5) = 8.1e-29
Identities = 56/221 (25%), Positives = 97/221 (43%)
Query: 203 RWFVVSGFQYLIQMKVFSQGPGSQEIYITESDDIKLSDNQSECWRTFSMPNDLVLKHGWR 262
RW + +G +Y I ++VF + +IY+ SD+I++ TF VL+
Sbjct: 355 RWVLETGRKYEIFIEVFDKS--GHKIYL--SDNIRIET-------TFPAEYFEVLESSVN 403
Query: 263 NS-RILKATSQGL----GKLTASLTYFSGLHDTKEVLKVVQEIMVCDRIKFSLDQTNGVS 317
S +KA QG G L A + +H ++ Q++ + D I T +
Sbjct: 404 GSYHHVKAVKQGQTVIDGTLKAVVDQAGSVHALSVPVRNEQDVEIYDPIVL----TPAI- 458
Query: 318 ESILLPWAP--GIYQEVELMATGGCAKTSSDYKWFSSDMATVSITASGVVQAKKP-GKAT 374
+ PW P G YQ + + ATGG S ++ W S++ A ++T G++ + G +
Sbjct: 459 --LTFPWQPKEGAYQYI-IKATGG----SGNFSWSSTNSAVATVTVKGMMTTVRDVGVSV 511
Query: 375 VKVVSIFDSFNYDEIVIEVSTPSSMVMLRNFPVETVVGSHL 415
+ + + +Y ++ + V P M VE VG HL
Sbjct: 512 IYAHDMRNPLHYGDMKVYVIEPVGMEF-SPCAVEARVGLHL 551
Score = 77 (32.2 bits), Expect = 7.0e-19, Sum P(5) = 7.0e-19
Identities = 44/154 (28%), Positives = 74/154 (48%)
Query: 853 MLSPKGLGTALVTVYD-VGLA-PPRAASALVQV-ADVDWIKIMS--GEE-ISLM-YTYMD 905
M +P G V V + VG+ P A A V + D+ ++I G+E ++L ++ D
Sbjct: 517 MRNPLHYGDMKVYVIEPVGMEFSPCAVEARVGLHLDLP-LRIFGQLGDERVTLSDCSHFD 575
Query: 906 IRVHIEDH-IVELIDDDATSSPDGGYFSMSSFKIMAKHLGITTLYVSARQQSGHEILSQP 964
++V +E + ++++ P G S ++ A G TTL VS + H LS
Sbjct: 576 MQVDMESTGVFQMLE--GRLPP--GQSHCSGIRVKALIPGYTTLLVSYTHSNVH--LSAK 629
Query: 965 IRVEVYAPPR-IHPHDIFLVP-GASYMLTLKGGP 996
I + Y P + I P + +V G+S +T +GGP
Sbjct: 630 ITIAAYPPLKPIDPVSVAVVTLGSSKDMTFEGGP 663
Score = 72 (30.4 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 30/111 (27%), Positives = 50/111 (45%)
Query: 1002 VDYTSTDEEIATIHRSSGQLFAISPGNTT--LIATVFGNGDVVICQAFSSVKVGVPSSVT 1059
++ DE + HR+ Q + P T ++A G V+ C A V V S +
Sbjct: 64 IEAVDVDERQCS-HRAVLQARSTQPSRLTSIILAEDILTGQVLRCDAI----VDVISEIQ 118
Query: 1060 LNAQSDQLAVGH---EMPIHPLFPEGDVFSFYELCRNYNWTI-EDEKILGF 1106
+ + + +L + E+ IH L EG+ FS + WTI +D ++ GF
Sbjct: 119 IESTTRELHLEDSPLELKIHALDSEGNTFSTLASLL-FEWTIVKDAEMAGF 168
Score = 68 (29.0 bits), Expect = 2.4e-05, Sum P(5) = 2.4e-05
Identities = 43/174 (24%), Positives = 74/174 (42%)
Query: 51 YVVKGIGIGHEMVSVHLLETEFMHMADSIL-LTVAEAMSIEPPSPVFVLVGAALQYKLKV 109
++VKG+ IG VS +++ + + + V + P V V+VGA +Q +
Sbjct: 1037 FLVKGLVIGQTSVSAFIIDKNGRKITSAPQQIEVFPPFRLLPRK-VTVIVGAMMQITSE- 1094
Query: 110 IRGNIPQVVALPSPHHRWSVSNSSVAQVD-----NMM--GLTQAL--RLGQTAVIVEDTR 160
G PQ L S H+ S +S+ V NM G+ QA+ G+ V+ +D
Sbjct: 1095 -GGPQPQSNILFSLSHQHIASVNSLGHVQGLAVGNMTVTGVVQAVDTETGKLVVVSKDQV 1153
Query: 161 VAGHTQVSSLNVVLPDT-------LWLYISPLSISGDPVEGTKAIPSVA-RWFV 206
Q+ ++ + P T + +Y+ L+ S P A+P + W V
Sbjct: 1154 DVEVVQLKAIRIRAPITRMKTGTLMPVYVMGLTSSQTPFAFGNALPGLTFHWSV 1207
Score = 61 (26.5 bits), Expect = 5.7e-23, Sum P(5) = 5.7e-23
Identities = 25/113 (22%), Positives = 50/113 (44%)
Query: 78 SILLTVAEAMSIEPPSPVFVLVGAALQYKLKVIRGNIPQVVALP--SPHHRWSVSNSSVA 135
++ + V +E P+ VL A L + + G ++ S + WS +NS+VA
Sbjct: 435 ALSVPVRNEQDVEIYDPI-VLTPAILTFPWQPKEGAYQYIIKATGGSGNFSWSSTNSAVA 493
Query: 136 QVDNMMGLTQALR-LGQTAVIVEDTRVAGHTQVSSLNVVLPDTLWLYISPLSI 187
V + G+ +R +G + + D R H + V + + + + SP ++
Sbjct: 494 TV-TVKGMMTTVRDVGVSVIYAHDMRNPLH--YGDMKVYVIEPVGMEFSPCAV 543
Score = 53 (23.7 bits), Expect = 1.3e-34, Sum P(5) = 1.3e-34
Identities = 40/198 (20%), Positives = 75/198 (37%)
Query: 1520 DLDTGNLYC-LFFPYSPEHLLRSVPKSKDTSPFISVSVNASLREAHRISGSASASALFVG 1578
D TG C L F E ++ + S V V A+++ AH I SA
Sbjct: 1623 DASTGYYSCALSFKPMSEQQVKVLSMS-----MTEVEVTAAVQGAHFIGEQISARLPVNP 1677
Query: 1579 GFSILEMDKSSLQLNLTSDSNKTTITILGNTGVEIHWQNQDLLKISPVHKEDIGIG--GH 1636
G + D + L++ +TI G+T + + + + ++++ + +
Sbjct: 1678 GIYADQTD-----IILSNQHTSADLTIYGSTAALQQLEVKSSSPVIAIEEKEVSLSFPSY 1732
Query: 1637 AQYEVSVLRTKKFKDKIIFTLPANGQRV---EVDVNFEPGQREESN---RIFASFIG--- 1687
A+Y V V+ + + ++ +V V F E IF FI
Sbjct: 1733 ARYTVRVVNPQGALTASVSVSSSSSDQVLLIPVTTGFTLAHMVEGADGPNIFQQFIDSYQ 1792
Query: 1688 --FFAVFSLIVVFSIAIL 1703
FF +F+L+ ++ I+
Sbjct: 1793 VMFFTLFALLAATAVVII 1810
Score = 50 (22.7 bits), Expect = 7.3e-22, Sum P(5) = 7.3e-22
Identities = 26/106 (24%), Positives = 44/106 (41%)
Query: 320 ILLPWAPGIYQEVELMATGGCAKTSSDYKWFSSDMATVSITASGVVQAKKPGKATVKVVS 379
+LLP A L AT GC Y+W S+ SI A V + + +A ++ S
Sbjct: 31 VLLPLARSTKINFTLEATEGC------YRWSSNRPEVASIEAVDVDERQCSHRAVLQARS 84
Query: 380 IFDSFNYDEIVIEVSTPSSMVMLRNFPVETVVGSHLQAAVTMKTLN 425
S I++ + V+ + V+ + S +Q T + L+
Sbjct: 85 TQPS-RLTSIILAEDILTGQVLRCDAIVDVI--SEIQIESTTRELH 127
Score = 49 (22.3 bits), Expect = 2.2e-25, Sum P(5) = 2.2e-25
Identities = 24/109 (22%), Positives = 43/109 (39%)
Query: 1362 ALVQVSMNRSPQKSDYVLVSVGAQ-LYPQNPVLHVGGSL--DFSVEGFSDQVSGHWFSDN 1418
A++Q++ PQ +L S+ Q + N + HV G + +V G V ++
Sbjct: 1087 AMMQITSEGGPQPQSNILFSLSHQHIASVNSLGHVQGLAVGNMTVTGVVQAVD----TET 1142
Query: 1419 ESVVHVHMPSGKAEAVGIGSTKVFFECPSMKLQTTVTVLSKNIVSIDAP 1467
+V V E V + + ++ MK T + V + S P
Sbjct: 1143 GKLVVVSKDQVDVEVVQLKAIRIRAPITRMKTGTLMPVYVMGLTSSQTP 1191
Score = 47 (21.6 bits), Expect = 1.5e-21, Sum P(5) = 1.5e-21
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 32 CGDLDVQIELENSGAFSDL 50
C D+Q+++E++G F L
Sbjct: 571 CSHFDMQVDMESTGVFQML 589
Score = 46 (21.3 bits), Expect = 0.00067, Sum P(4) = 0.00067
Identities = 21/95 (22%), Positives = 40/95 (42%)
Query: 53 VKGIGIGHEMVS--VHLLETEFMHMA----DSILLTVAEAMSIEPPSPVFVLVGAALQ-- 104
V+G+ +G+ V+ V ++TE + D + + V + +I +P+ + L
Sbjct: 1121 VQGLAVGNMTVTGVVQAVDTETGKLVVVSKDQVDVEVVQLKAIRIRAPITRMKTGTLMPV 1180
Query: 105 YKLKVIRGNIPQVV--ALPSPHHRWSVSNSSVAQV 137
Y + + P ALP WSV+ + V
Sbjct: 1181 YVMGLTSSQTPFAFGNALPGLTFHWSVTKRDILDV 1215
Score = 43 (20.2 bits), Expect = 1.3e-34, Sum P(5) = 1.3e-34
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 493 HATLSKDYQHFDRSFDGPIVLKASSRIAAYPPL 525
+ TL Y H + + L A IAAYPPL
Sbjct: 612 YTTLLVSYTHSN------VHLSAKITIAAYPPL 638
Score = 43 (20.2 bits), Expect = 0.00067, Sum P(4) = 0.00067
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 1011 IATIHRSSGQLFAISPGNTTLI 1032
+A + +SS +FA+ G+T ++
Sbjct: 298 VANLDQSSSTVFALQHGHTNIL 319
Score = 42 (19.8 bits), Expect = 1.6e-08, Sum P(4) = 1.6e-08
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 1573 SALFVGGFSILEMDKSSLQLNLTSDSNKT--TITILGNTGV 1611
+A+ + GF L ++L L L D T T+TI + V
Sbjct: 863 AAMVLSGFDPLSAVSATLDLLLVEDVRVTPDTVTIYNHPDV 903
Score = 40 (19.1 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 17/58 (29%), Positives = 26/58 (44%)
Query: 641 PAVAEVSLSVTCSFPASIALLVDEPVNERKVIQTAAQADRSPGRIRVTPVTVANGQTI 698
P +A V+ SFP S A VN + + TA+ + S +V + V G T+
Sbjct: 1716 PVIAIEEKEVSLSFP-SYARYTVRVVNPQGAL-TASVSVSSSSSDQVLLIPVTTGFTL 1771
Score = 39 (18.8 bits), Expect = 1.8e-21, Sum P(5) = 1.8e-21
Identities = 10/53 (18%), Positives = 22/53 (41%)
Query: 478 SWAHLYASSSGRTMLHATLSKDYQHFDRSFDGPIVLKASSRIAAYPPLIVQQA 530
S+ H+ A G+T++ TL + ++ + Y P+++ A
Sbjct: 405 SYHHVKAVKQGQTVIDGTLKAVVDQAGSVHALSVPVRNEQDVEIYDPIVLTPA 457
Score = 39 (18.8 bits), Expect = 5.5e-16, Sum P(4) = 5.5e-16
Identities = 19/68 (27%), Positives = 31/68 (45%)
Query: 1015 HRSSGQLFAISPGNTTLIATVFGNGDV-----VICQAFSSVKVGVPSSV---TLNAQSDQ 1066
H S ++ A+ PG TTL+ + + + +V + A+ +K P SV TL + D
Sbjct: 599 HCSGIRVKALIPGYTTLLVS-YTHSNVHLSAKITIAAYPPLKPIDPVSVAVVTLGSSKDM 657
Query: 1067 LAVGHEMP 1074
G P
Sbjct: 658 TFEGGPRP 665
Score = 38 (18.4 bits), Expect = 4.4e-33, Sum P(5) = 4.4e-33
Identities = 6/29 (20%), Positives = 16/29 (55%)
Query: 1688 FFAVFSLIVVFSIAILDGRKRSTRSQPSV 1716
++ + L+ + +++G R++ PSV
Sbjct: 1529 YYEIAGLLRTYREVLIEGASRTSSMTPSV 1557
Score = 38 (18.4 bits), Expect = 1.0e-23, Sum P(4) = 1.0e-23
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 1264 IQAKDRSSGRIEIASCVRVAEVAQIRISNRYPLN 1297
++ S +E+ + V+ A +IS R P+N
Sbjct: 1643 VKVLSMSMTEVEVTAAVQGAHFIGEQISARLPVN 1676
Score = 38 (18.4 bits), Expect = 7.0e-19, Sum P(5) = 7.0e-19
Identities = 9/49 (18%), Positives = 22/49 (44%)
Query: 983 VPGASYMLTLKGGPTVGVYVDYTSTDEEIATIHRSSGQLFAISPGNTTL 1031
+PG ++ ++ + V+ + +++ H + +F S G T L
Sbjct: 1198 LPGLTFHWSVTKRDILDVHTRHAEASVQLSAEHNFAMSVFGRSKGRTGL 1246
Score = 37 (18.1 bits), Expect = 6.4e-15, Sum P(5) = 6.4e-15
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 354 MATVSITASGVVQAKKPGKATVKVVS 379
+A ++T +GVVQA + VVS
Sbjct: 1124 LAVGNMTVTGVVQAVDTETGKLVVVS 1149
>UNIPROTKB|Q5VU65 [details] [associations]
symbol:NUP210L "Nuclear pore membrane glycoprotein
210-like" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] Pfam:PF02368 GO:GO:0016021 EMBL:AL590431
EMBL:AL358472 EMBL:AK125924 EMBL:AK128000 EMBL:AK128108
EMBL:AL513546 EMBL:AL833964 IPI:IPI00410401 PIR:T43452
RefSeq:NP_001152956.1 RefSeq:NP_997191.2 UniGene:Hs.67639
ProteinModelPortal:Q5VU65 SMR:Q5VU65 STRING:Q5VU65
PhosphoSite:Q5VU65 DMDM:74747057 PaxDb:Q5VU65 PRIDE:Q5VU65
Ensembl:ENST00000368553 Ensembl:ENST00000368559 GeneID:91181
KEGG:hsa:91181 UCSC:uc001fdw.3 CTD:91181 GeneCards:GC01M153965
H-InvDB:HIX0001099 HGNC:HGNC:29915 neXtProt:NX_Q5VU65
PharmGKB:PA134984604 eggNOG:NOG315446 HOGENOM:HOG000115312
HOVERGEN:HBG082098 InParanoid:Q5VU65 KO:K14314 OMA:IKYRVAK
OrthoDB:EOG4W9J31 GenomeRNAi:91181 NextBio:77138
ArrayExpress:Q5VU65 Bgee:Q5VU65 CleanEx:HS_NUP210L
Genevestigator:Q5VU65 GermOnline:ENSG00000143552 InterPro:IPR003343
InterPro:IPR008964 SMART:SM00635 SUPFAM:SSF49373 Uniprot:Q5VU65
Length = 1888
Score = 240 (89.5 bits), Expect = 1.2e-33, Sum P(3) = 1.2e-33
Identities = 153/665 (23%), Positives = 272/665 (40%)
Query: 567 DVLLVGGPEPW--EEDVDFIETFEIFNGKHNHASDGVHIHVVSGSSKN--LYGVFCQTLG 622
+++ GGP PW E F+E N + + + S +N +Y + C LG
Sbjct: 672 EMVFEGGPRPWILEPSRFFLE----LNAEKTEKIGIAQVWLPSKRKQNQYIYRIQCLDLG 727
Query: 623 TFELVFKRGNLVGDDHPLPAVAEVSLSVTCSFPASIALLVDEPVNERKVIQTAAQADRSP 682
L F+ GN G +P PAV + + C+ PAS+++ PV + + AQ P
Sbjct: 728 EQVLTFRIGNHPGVLNPSPAVEVLQVRFICAHPASMSVT---PVYK---VPAGAQPCPLP 781
Query: 683 GRIR-VTPVTVANGQTIRIAAVGIXXXXXXXXXXXXLCLGWELSNCDGLAYWDDAY---- 737
+ + PV+ + +A L L W+ SN + LA+++D
Sbjct: 782 QHNKWLIPVSRLRDTVLELAV--FDQHRRKFDNFSSLMLEWKSSN-ETLAHFEDYKSVEM 838
Query: 738 -----GSQKSASSWERFLVLQNESGLCVVRATASGFCDAKDGHHSAQLLEISESFLTDAV 792
GS ++ + L + G ++ G+ + K EIS + V
Sbjct: 839 VAKDDGSGQTRLHGHQILKVHQIKGTVLIGVNFVGYSEKKSPK------EISNLPRSVDV 892
Query: 793 RLQLVSTLRVNPEYNLLFFNPDAKANLSIAGGSCFLEAAVNDS-QVVEVIQAPEGLRCLQ 851
L LV + V PE ++ +PD K S+ GS + VN S Q V I E ++
Sbjct: 893 ELLLVDDVTVVPENATIYNHPDVKETFSLVEGSGYF--LVNSSEQGVVTITYMEAESSVE 950
Query: 852 LMLSPKGLGTALVTVYDVGLAPPRAASALVQVADVDWIKIMSGEEISLMYTYM-DIRV-- 908
L+ P G + VYD+ LA A+A ++V+D+ +++ +++ + T + +RV
Sbjct: 951 LV--PLHPGFFTLEVYDLCLAFLGPATAHLRVSDIQELELDLIDKVEIDKTVLVTVRVLG 1008
Query: 909 ----HIEDHI-------VELIDDDATSSPDGGYFSMS-SFKIMAKHLGITTLYVSARQQS 956
++ ++L T +P S ++ + A +G TTL A+ +
Sbjct: 1009 SSKRPFQNKYFRNMELKLQLASAIVTLTPMEQQDEYSENYILRATTIGQTTLVAIAKDKM 1068
Query: 957 GHEILSQPIRVEVYAPPRIHPHDIFLVPGASYMLTLKGGPTVGVYVDYTSTDEEIATIHR 1016
G + S P +EV+ P R+ P + L+P + +GGP V ++ +++ +A ++R
Sbjct: 1069 GRKYTSTPRHIEVFPPFRLLPEKMTLIPMNMMQVMSEGGPQPQSIVHFSISNQTVAVVNR 1128
Query: 1017 SSGQLFAISPGNTTLIATVFG-NGDV--VICQAFSSVKVGVPS--SVTLNAQSDQLAVGH 1071
GQ+ G + T+ N D VI + V++ V +V + A + +L
Sbjct: 1129 R-GQVTGKIVGTAVVHGTIQTVNEDTGKVIVFSQDEVQIEVVQLRAVRILAAATRLITAT 1187
Query: 1072 EMPIHPLFPEGDV--FSFYELCRN--YNWTIEDEKILGFWLGDQLHSENQDLQSAASGEI 1127
+MP++ + FSF ++W++ +L HSE LQ
Sbjct: 1188 KMPVYVMGVTSTQTPFSFSNANPGLTFHWSMSKRDVLDLV---PRHSE-VFLQLPV---- 1239
Query: 1128 QFSNDLDKKELGFIKTLYGRSAGRTDVATTFSCDFVSDSYSESRIYSASISLSVVSDLPL 1187
E F ++ ++AGRT + T C S E + S + ++ L
Sbjct: 1240 ---------EHNFAMVVHTKAAGRTSIKVTVHCMNSSSGQFEGNLLELSDEVQILVFEKL 1290
Query: 1188 ALGIP 1192
L P
Sbjct: 1291 QLFYP 1295
Score = 151 (58.2 bits), Expect = 1.2e-33, Sum P(3) = 1.2e-33
Identities = 79/312 (25%), Positives = 138/312 (44%)
Query: 203 RWFVVSGFQYLIQMKVFSQGPGSQEIYITESDDIKLS-DNQSECWRTFSMPNDLVLKHGW 261
RW + G Y+I + VF + S ++YI SD+++++ D E + L +G
Sbjct: 368 RWSLEVGQVYVITVDVFDKS--STKVYI--SDNLRITYDFPKEYFE-----EQLTTVNG- 417
Query: 262 RNSRILKATSQGLGKLTASLTYF----SGLHDTKEVLKVVQEIMVCDRIKFSLDQTNGVS 317
+ I+KA G+ + ASLT + K ++K QE+ +I F + T
Sbjct: 418 -SYHIVKALKDGVVVINASLTSIIYQNKDIQPIKFLIKHQQEV----KIYFPIMLT---P 469
Query: 318 ESILLPWAP-GIYQEVELMATGGCAKTSSDYKWFSSDMATVSITASGVVQAKKP-GKATV 375
+ + P P G+ ++ GG S ++ W SS+ V +T GVV A + G +TV
Sbjct: 470 KFLAFPHHPMGMLYRYKVQVEGG----SGNFTWTSSNETVVIVTTKGVVTAGQVRGNSTV 525
Query: 376 KVVSIFDSFNYDEIVIEVSTPSSMVMLRNFPVETVVGSHLQAAVTMKTLNGAYFYRCDAF 435
+ + F Y EI I V + M +L F + +G ++ + M +N AF
Sbjct: 526 LARDVQNPFRYGEIKIHVLKLNKMELLP-FHADVEIGQIIEIPIAMYHINKET-KEAMAF 583
Query: 436 SSSVNWKAGSESFIVLNATKKQPFLDKLGTVEHDISLHGPP-CSWAHLYASSSGRTMLHA 494
+ S + LN K+ F ++ I GP CS H+ A S G T++
Sbjct: 584 TDC------SHLSLDLNMDKQGVFT----LLKEGIQRPGPMHCSSTHIAAKSLGHTLVTV 633
Query: 495 TLSKDYQHFDRS 506
++++ ++ + S
Sbjct: 634 SVNECDKYLESS 645
Score = 148 (57.2 bits), Expect = 1.8e-33, Sum P(4) = 1.8e-33
Identities = 70/267 (26%), Positives = 129/267 (48%)
Query: 40 ELENSGAFSDLYVVKGIGIGHEMVSVHLLETEFMHMADSIL-LTVAEAMSIEPPSPVFVL 98
E+E D+ +V GI G +V V + E + +A +++ L V E + + P +++L
Sbjct: 206 EMEKEEKQGDVILVSGIRTGAAVVKVRIHEPFYKKVAAALIRLLVLENIFLIPSHDIYLL 265
Query: 99 VGAALQYKL-KVIRGNIPQVVALPSPH-------HRWSVSNS---SVAQVDNMMGLTQAL 147
VG ++Y++ K+++G + +V P H HR +++ S VA +D+ + A
Sbjct: 266 VGTYIKYQVAKMVQGRVTEV-KFPLEHYILELQDHRVALNGSHSEKVAILDDKTAMVTAS 324
Query: 148 RLGQTAVIVEDTRVAGHTQVSSLNVVLPDTLWLYISPLSISGDPVEGTKAIPSVARWFVV 207
+LGQT ++ V H + S LP+ +Y+ G V+ P RW +
Sbjct: 325 QLGQTNLVFVHKNV--HMRSVS---GLPNCT-IYVVEPGFLGFTVQ-----PG-NRWSLE 372
Query: 208 SGFQYLIQMKVFSQGPGSQEIYITESDDIKLS-DNQSECWRTFSMPNDLVLKHGWRNSRI 266
G Y+I + VF + S ++YI SD+++++ D E + L +G + I
Sbjct: 373 VGQVYVITVDVFDKS--STKVYI--SDNLRITYDFPKEYFE-----EQLTTVNG--SYHI 421
Query: 267 LKATSQGLGKLTASLTYFSGLHDTKEV 293
+KA G+ + ASLT S ++ K++
Sbjct: 422 VKALKDGVVVINASLT--SIIYQNKDI 446
Score = 137 (53.3 bits), Expect = 1.2e-33, Sum P(3) = 1.2e-33
Identities = 53/204 (25%), Positives = 88/204 (43%)
Query: 1280 VRVAEVAQIRISNRYPLNVIH------LAVGAECEIPISYYDALGTPFHEAHNVILYHAE 1333
V+VA V +R+S++ L +G + +Y+++G FH HN LY A
Sbjct: 1373 VQVAPVTYLRVSSQPKLYTAQGRTLSAFPLGMSLTFTVQFYNSIGEKFH-THNTQLYLA- 1430
Query: 1334 TNYHDVVSINYTLNGSGKIYLKAKQHGRALVQVSMNRSPQKSDYVLVSVGAQLYPQNPVL 1393
N D++ I N + +A G LV + R P +DY+ V+V + P +
Sbjct: 1431 LNRDDLLHIGPG-NKNYTYMAQAVNRGLTLVGLWDRRHPGMADYIPVAVEHAIEPDTKLT 1489
Query: 1394 HVGGSLDFSVEGFSDQVS-GHWFSDNESVVHVHMPSGKAEAVGIGSTKVFFECPSM-KL- 1450
VG + FS S G W +++ + +G A G+ +F + P + K
Sbjct: 1490 FVGDIICFSTHLVSQHGEPGIWMISANNILQTDIVTGVGVARSPGTAMIFHDIPGVVKTY 1549
Query: 1451 -QTTVTVLSKNIVSIDAPKEVLTN 1473
+ V S+ ++S D K LTN
Sbjct: 1550 REVVVNASSRLMLSYDL-KTYLTN 1572
Score = 53 (23.7 bits), Expect = 1.8e-33, Sum P(4) = 1.8e-33
Identities = 21/70 (30%), Positives = 35/70 (50%)
Query: 460 LDKLGT---VEHDISLHGPP-CSWAHLYASSSGRTMLHATLSKDYQHFDRSFDGPIVLKA 515
+DK G ++ I GP CS H+ A S G T++ ++++ D+ L++
Sbjct: 595 MDKQGVFTLLKEGIQRPGPMHCSSTHIAAKSLGHTLVTVSVNE----CDK------YLES 644
Query: 516 SSRIAAYPPL 525
S+ AAY PL
Sbjct: 645 SATFAAYEPL 654
Score = 52 (23.4 bits), Expect = 9.4e-14, Sum P(3) = 9.4e-14
Identities = 19/69 (27%), Positives = 33/69 (47%)
Query: 839 EVIQAPEGLRCLQLMLSPKGLGTALVTVYDVGLAPPRAASALVQVADVDWIKIMSGEEIS 898
E IQ P + C ++ K LG LVTV V S+ A + +K ++ E++
Sbjct: 606 EGIQRPGPMHCSSTHIAAKSLGHTLVTV-SVNECDKYLESSATFAA-YEPLKALNPVEVA 663
Query: 899 LMYTYMDIR 907
L+ T+ ++
Sbjct: 664 LV-TWQSVK 671
Score = 49 (22.3 bits), Expect = 8.8e-14, Sum P(4) = 8.8e-14
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 556 DKLYLVPRTHVDVLLVGGPEP 576
+K+ L+P + V+ GGP+P
Sbjct: 1090 EKMTLIPMNMMQVMSEGGPQP 1110
Score = 39 (18.8 bits), Expect = 2.5e-22, Sum P(4) = 2.5e-22
Identities = 16/55 (29%), Positives = 20/55 (36%)
Query: 120 LPSPHHRWSVSNSSVAQVDNMMGLTQALRLGQTAVIVEDTRVAGHTQVSSLNVVL 174
L PHH + QV+ G +T VIV V QV + VL
Sbjct: 472 LAFPHHPMGMLYRYKVQVEGGSGNFTWTSSNETVVIVTTKGVVTAGQVRGNSTVL 526
Score = 38 (18.4 bits), Expect = 2.4e-23, Sum P(4) = 2.4e-23
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 1309 IPISYYDALGTP 1320
+P+ Y LGTP
Sbjct: 1842 VPVVYVPTLGTP 1853
Score = 37 (18.1 bits), Expect = 4.1e-22, Sum P(4) = 4.1e-22
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 122 SPHHRWSVSNSSVAQVDNMMGLTQALRLGQTAVIVEDTR 160
S + W+ SN +V V +T G + V+ D +
Sbjct: 493 SGNFTWTSSNETVVIVTTKGVVTAGQVRGNSTVLARDVQ 531
Score = 37 (18.1 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 1353 YLKAKQHGRALVQVSMN 1369
++ AK G LV VS+N
Sbjct: 620 HIAAKSLGHTLVTVSVN 636
>UNIPROTKB|Q8TEM1 [details] [associations]
symbol:NUP210 "Nuclear pore membrane glycoprotein 210"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005643 "nuclear pore" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0005635 "nuclear envelope" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0008645 "hexose transport" evidence=TAS] [GO:0010827
"regulation of glucose transport" evidence=TAS] [GO:0015758
"glucose transport" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0019221 "cytokine-mediated signaling pathway"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_111217 Reactome:REACT_15518 Pfam:PF02368
GO:GO:0005635 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0016032 GO:GO:0044281 GO:GO:0005789 GO:GO:0015031
GO:GO:0005975 GO:GO:0031965 GO:GO:0005643 GO:GO:0019221
GO:GO:0015758 GO:GO:0010827 GO:GO:0055085 GO:GO:0051028
EMBL:AC027124 eggNOG:NOG315446 HOGENOM:HOG000115312
HOVERGEN:HBG082098 KO:K14314 InterPro:IPR003343 InterPro:IPR008964
SMART:SM00635 SUPFAM:SSF49373 EMBL:AC069246 EMBL:BC067089
EMBL:AK026042 EMBL:AK074101 EMBL:AB020713 EMBL:AK075545
EMBL:AL117527 IPI:IPI00291755 IPI:IPI00871723 PIR:T17289
RefSeq:NP_079199.2 UniGene:Hs.475525 ProteinModelPortal:Q8TEM1
SMR:Q8TEM1 IntAct:Q8TEM1 STRING:Q8TEM1 PhosphoSite:Q8TEM1
DMDM:116242720 PaxDb:Q8TEM1 PRIDE:Q8TEM1 Ensembl:ENST00000254508
GeneID:23225 KEGG:hsa:23225 UCSC:uc003bxv.1 UCSC:uc003bxx.3
CTD:23225 GeneCards:GC03M013332 H-InvDB:HIX0003074
H-InvDB:HIX0018493 H-InvDB:HIX0024491 HGNC:HGNC:30052 MIM:607703
neXtProt:NX_Q8TEM1 PharmGKB:PA128394614 InParanoid:Q8TEM1
OMA:EDITTGQ OrthoDB:EOG4RJG0P ChiTaRS:NUP210 GenomeRNAi:23225
NextBio:44833 Bgee:Q8TEM1 CleanEx:HS_NUP210 Genevestigator:Q8TEM1
GermOnline:ENSG00000132182 Uniprot:Q8TEM1
Length = 1887
Score = 253 (94.1 bits), Expect = 1.3e-32, Sum P(3) = 1.3e-32
Identities = 135/583 (23%), Positives = 253/583 (43%)
Query: 567 DVLLVGGPEPWE-EDVDFIETFEIFNGKHNHASDGVHIHVVSGSSKNLYGVFCQTLGTFE 625
++L GGP PW E F + + H ++ V CQ LG
Sbjct: 661 EMLFEGGPRPWILEPSKFFQNVTA-EDTDSIGLALFAPHSSRNYQQHWILVTCQALGEQV 719
Query: 626 LVFKRGNLVGDDHPLPAVAEVSLSVTCSFPASIALL-------VDE--PVNERKVIQTAA 676
+ GN +P PAV + C+ P+ + L +D P+ ++
Sbjct: 720 IALSVGNKPSLTNPFPAVEPAVVKFVCAPPSRLTLAPVYTSPQLDMSCPLLQQNKQVVPV 779
Query: 677 QADRSPGRIRVTPVTVANGQTIRIAAVGIXXXXXXXXXXXXLCLGWELSNCDGLAYWDDA 736
+ R+P R+ + + +++ I + EL L DD
Sbjct: 780 SSHRNP-RLDLAAYDQEGRRFDNFSSLSIQWESTRPVLAS---IEPELPM--QLVSQDDE 833
Query: 737 YGSQKSASSWERFLVLQNESGLCVVRATASGFCDAKDGH-HSAQLLEISESF--LTDAVR 793
G QK + LV SG + ATA+G+ ++ H SA+ + + L+ ++
Sbjct: 834 SG-QKKLHGLQAILV-HEASGTTAITATATGY---QESHLSSARTKQPHDPLVPLSASIE 888
Query: 794 LQLVSTLRVNPEYNLLFFNPDAKANLSIAGGSCFLEAAVNDSQVVEVI-QAPEGLRCLQL 852
L LV +RV+PE ++ +P +A L I GS + + + VV+V Q G+ +
Sbjct: 889 LILVEDVRVSPEEVTIYNHPGIQAELRIREGSGYFFLNTSTADVVKVAYQEARGVAMVHP 948
Query: 853 MLSPKGLGTALVTVYDVGLAPPRAASALVQVADVD--WIKIMSGEEI------------- 897
+L P G++ + ++D+ L P A A+V V+D+ +I+++ EI
Sbjct: 949 LL-P---GSSTIMIHDLCLVFPAPAKAVVYVSDIQELYIRVVDKVEIGKTVKAYVRVLDL 1004
Query: 898 ------SLMYTYMDIRVHIEDHIVELID-DDATSSPDGGYFSMSSFKIMAKHLGITTLYV 950
+ + +MD+++ I+ L+ D+A + ++++ F I +G T+L
Sbjct: 1005 HKKPFLAKYFPFMDLKLRAASPIITLVALDEALDN-----YTIT-FLIRGVAIGQTSLTA 1058
Query: 951 SARQQSGHEILSQPIRVEVYAPPRIHPHDIFLVPGASYMLTLKGGPTVGVYVDYTSTDEE 1010
S ++G I S P ++EV+ P R+ P + L+ GA+ +T +GGP + ++ ++E
Sbjct: 1059 SVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLIGATMQVTSEGGPQPQSNILFSISNES 1118
Query: 1011 IATIHRSSGQLFAISPGNTT---LIATVFGN-GDVVIC-QAFSSVKVGVPSSVTLNAQSD 1065
+A + ++G + ++ GN T L+ V G VVI Q V+V + +V + A
Sbjct: 1119 VALVS-AAGLVQGLAIGNGTVSGLVQAVDAETGKVVIISQDLVQVEVLLLRAVRIRAPIM 1177
Query: 1066 QLAVGHEMPIHP--LFPEGDVFSFYELCRN--YNWTIEDEKIL 1104
++ G +MPI+ + + FSF ++W++ +L
Sbjct: 1178 RMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHWSVTKRDVL 1220
Score = 143 (55.4 bits), Expect = 1.3e-32, Sum P(3) = 1.3e-32
Identities = 82/341 (24%), Positives = 153/341 (44%)
Query: 40 ELENSGAFSDLYVVKGIGIGHEMVSVHLLETEFMHMADS-ILLTVAEAMSIEPPSPVFVL 98
E+E + D +V G+ G + + E + ++ + + L + E + + P V+++
Sbjct: 195 EMEKAAKQGDTILVSGMKTGSSKLKARIQEAVYKNVRPAEVRLLILENILLNPAYDVYLM 254
Query: 99 VGAALQYKLKVIR-GNIPQVVALPSPHHRWSVSNS----------SVAQVDNMMGLTQAL 147
VG ++ YK++ IR G I ++ ++PS + + NS VA + + AL
Sbjct: 255 VGTSIHYKVQKIRQGKITEL-SMPSDQYELQLQNSIPGPEGDPARPVAVLAQDTSMVTAL 313
Query: 148 RLGQTAVIV--EDTRVAGHTQV--SSLNVVLPDTLWLYISPLSISGDPVEGTKAIPSVAR 203
+LGQ+++++ R+ G +++ S++ VV P L + P GD R
Sbjct: 314 QLGQSSLVLGHRSIRMQGASRLPNSTIYVVEPGYLGFTVHP----GD------------R 357
Query: 204 WFVVSGFQYLIQMKVFSQGPGSQEIYITESDDIKLSDN-QSECWRTFSMPNDLVLKHGWR 262
W + +G Y I ++VF + S ++Y+ SD+I++ +E + S + +
Sbjct: 358 WVLETGRLYEITIEVFDKF--SNKVYV--SDNIRIETVLPAEFFEVLSSSQN----GSYH 409
Query: 263 NSRILKATSQGL-GKLTASLTYFSGLHDTKEVLKVVQEIMVCDRIKFSLDQTNGVSESIL 321
R LK + LT+ + G+H + + QE+ + I +L SIL
Sbjct: 410 RIRALKRGQTAIDAALTSVVDQDGGVHILQVPVWNQQEVEI--HIPITL------YPSIL 461
Query: 322 -LPWAP--GIYQEVELMATGGCAKTSSDYKWFSSDMATVSI 359
PW P G YQ + A GG S + S +ATV++
Sbjct: 462 TFPWQPKTGAYQYT-IRAHGGSGNFS--WSSSSHLVATVTV 499
Score = 122 (48.0 bits), Expect = 1.3e-32, Sum P(3) = 1.3e-32
Identities = 53/210 (25%), Positives = 98/210 (46%)
Query: 1276 IASCVRVAEVAQIRISNRYPLN------VIHLAVGAECEIPISYYDALGTPFHEAHNVIL 1329
I V+V+ V+ +R+S L+ ++ + +G + ++D G FH AH+ +L
Sbjct: 1365 IIVAVKVSPVSYLRVSMSPVLHTQNKEALVAVPLGMTVTFTVHFHDNSGDVFH-AHSSVL 1423
Query: 1330 YHAETNYHDVVSINYTLNGSGKIYLKAKQHGRALVQVSMNRSPQKSDYVLVSVGAQLYPQ 1389
A TN D V I + + ++ G L++V P SD++ + V + P+
Sbjct: 1424 NFA-TNRDDFVQIGKGPTNNTCV-VRTVSVGLTLLRVWDAEHPGLSDFMPLPVLQAISPE 1481
Query: 1390 -NPVLHVGGSLDFSVEGFS-DQVSGHWFSDNESVVHVHMPSGKAEAVGIGSTKVFFECPS 1447
+ + VG L + S + +SG W S S++H+ +G A A +GS V++E
Sbjct: 1482 LSGAMVVGDVLCLATVLTSLEGLSGTWSSSANSILHIDPKTGVAVARAVGSVTVYYEVAG 1541
Query: 1448 MKLQTTVTVLSKNIVSIDAPKEVLTNIPYP 1477
L+T V +VS+ P+ ++ +P
Sbjct: 1542 -HLRTYKEV----VVSV--PQRIMARHLHP 1564
Score = 105 (42.0 bits), Expect = 1.1e-28, Sum P(3) = 1.1e-28
Identities = 82/340 (24%), Positives = 133/340 (39%)
Query: 203 RWFVVSGFQYLIQMKVFSQGPGSQEIYITESDDIKLSDN-QSECWRTFSMPNDLVLKHGW 261
RW + +G Y I ++VF + S ++Y+ SD+I++ +E + S + +
Sbjct: 357 RWVLETGRLYEITIEVFDKF--SNKVYV--SDNIRIETVLPAEFFEVLSSSQN----GSY 408
Query: 262 RNSRILKATSQGL-GKLTASLTYFSGLHDTKEVLKVVQEIMVCDRIKFSLDQTNGVSESI 320
R LK + LT+ + G+H + + QE+ + I +L SI
Sbjct: 409 HRIRALKRGQTAIDAALTSVVDQDGGVHILQVPVWNQQEVEI--HIPITL------YPSI 460
Query: 321 L-LPWAP--GIYQEVELMATGGCAKTSSDYKWFSSDMATVSITASGVVQAKKP-GKATVK 376
L PW P G YQ + A GG S ++ W SS ++T GV+ G + ++
Sbjct: 461 LTFPWQPKTGAYQYT-IRAHGG----SGNFSWSSSSHLVATVTVKGVMTTGSDIGFSVIQ 515
Query: 377 VVSIFDSFNYDEIVIEVSTPSSMVMLRNFPVETVVGSHLQAAVTMKTLNGAYFYRCDAFS 436
+ + ++ E+ + V P SM VE VG L+ + + L S
Sbjct: 516 AHDVQNPLHFGEMKVYVIEPHSMEFAP-CQVEARVGQALELPLRISGLMPGGASEVVTLS 574
Query: 437 SSVNWKAGSESFIVLNATKKQPFLDKL--GTVEHDISLHGPPCSWAHLYASSSGRTMLHA 494
++ E V N QP +L G+ EH CS + A + G T
Sbjct: 575 DCSHFDLAVE---VENQGVFQPLPGRLPPGS-EH--------CSGIRVKAEAQGST---- 618
Query: 495 TLSKDYQHFDRSFDGPIVLKASSRIAAYPPLIVQQAGDGS 534
TL Y+H I + A + A P V GS
Sbjct: 619 TLLVSYRHGHVHLSAKITIAAYLPLKAVDPSSVALVTLGS 658
Score = 84 (34.6 bits), Expect = 5.8e-15, Sum P(3) = 5.8e-15
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 934 SSFKIMAKHLGITTLYVSARQQSGHEILSQPIRVEVYAPPR-IHPHDIFLVP-GASYMLT 991
S ++ A+ G TTL VS R GH LS I + Y P + + P + LV G+S +
Sbjct: 606 SGIRVKAEAQGSTTLLVSYRH--GHVHLSAKITIAAYLPLKAVDPSSVALVTLGSSKEML 663
Query: 992 LKGGP 996
+GGP
Sbjct: 664 FEGGP 668
Score = 76 (31.8 bits), Expect = 2.1e-09, Sum P(4) = 2.1e-09
Identities = 37/157 (23%), Positives = 70/157 (44%)
Query: 1313 YYDALGTPFHEAHNVILYHAETNYHDVVSINYTLNGS--GKIYLKAKQHGRALVQVSMNR 1370
Y+ + A +I A D +I + + G G+ L A +A ++ N
Sbjct: 1013 YFPFMDLKLRAASPIITLVALDEALDNYTITFLIRGVAIGQTSLTASVTNKAGQRI--NS 1070
Query: 1371 SPQKSDYVLVSVGAQLYPQNPVLHVGGSLDFSVEGFSDQVSGHWFS-DNESVVHVHMPSG 1429
+PQ+ + V +L P+ L +G ++ + EG S FS NESV V +G
Sbjct: 1071 APQQIE---VFPPFRLMPRKVTLLIGATMQVTSEGGPQPQSNILFSISNESVALVSA-AG 1126
Query: 1430 KAEAVGIGSTKVFFECPSMKLQT-TVTVLSKNIVSID 1465
+ + IG+ V ++ +T V ++S+++V ++
Sbjct: 1127 LVQGLAIGNGTVSGLVQAVDAETGKVVIISQDLVQVE 1163
Score = 49 (22.3 bits), Expect = 6.7e-23, Sum P(3) = 6.7e-23
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 32 CGDLDVQIELENSGAFSDL 50
C D+ +E+EN G F L
Sbjct: 576 CSHFDLAVEVENQGVFQPL 594
Score = 49 (22.3 bits), Expect = 6.7e-23, Sum P(3) = 6.7e-23
Identities = 16/57 (28%), Positives = 25/57 (43%)
Query: 320 ILLPWAPGIYQEVELMATGGCAKTSSDYKWFSSDMATVSITASGVVQAKKPGKATVK 376
+LLP+ L A+ GC Y+W S+ SI G+ + + KA V+
Sbjct: 33 VLLPFTRATRVNFTLEASEGC------YRWLSTRPEVASIEPLGLDEQQCSQKAVVQ 83
Score = 43 (20.2 bits), Expect = 8.4e-11, Sum P(3) = 8.4e-11
Identities = 16/72 (22%), Positives = 34/72 (47%)
Query: 332 VELMATGGCAKTSSDYKWFSSDMATVSITASGVVQAKKPGKATVK-VVSIFDSFNYDEIV 390
+++ + GG + S+ + S+ + ++A+G+VQ G TV +V D+ ++
Sbjct: 1096 MQVTSEGG-PQPQSNILFSISNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKVVI 1154
Query: 391 IEVSTPSSMVML 402
I V+L
Sbjct: 1155 ISQDLVQVEVLL 1166
Score = 40 (19.1 bits), Expect = 2.1e-09, Sum P(4) = 2.1e-09
Identities = 16/82 (19%), Positives = 32/82 (39%)
Query: 1259 NHLACIQAKDRSSGRIEIASCVRVAEVAQIRISNRYPLNVIHLAVGAECEIP--ISYY-- 1314
+HL+ + K + +++ + + V +R+S H + AE I Y+
Sbjct: 866 SHLSSARTKQPHDPLVPLSASIELILVEDVRVSPEEVTIYNHPGIQAELRIREGSGYFFL 925
Query: 1315 -----DALGTPFHEAHNVILYH 1331
D + + EA V + H
Sbjct: 926 NTSTADVVKVAYQEARGVAMVH 947
>MGI|MGI:1859555 [details] [associations]
symbol:Nup210 "nucleoporin 210" species:10090 "Mus musculus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005643 "nuclear pore" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
Pfam:PF02368 MGI:MGI:1859555 GO:GO:0005789 GO:GO:0015031
GO:GO:0031965 GO:GO:0005643 GO:GO:0051028 eggNOG:NOG315446
HOGENOM:HOG000115312 HOVERGEN:HBG082098 KO:K14314
InterPro:IPR003343 InterPro:IPR008964 SMART:SM00635 SUPFAM:SSF49373
GeneTree:ENSGT00390000009491 CTD:23225 OMA:EDITTGQ ChiTaRS:NUP210
EMBL:AF113751 EMBL:BC052468 EMBL:AK173056 EMBL:AK157272
IPI:IPI00342158 RefSeq:NP_061285.2 UniGene:Mm.28162
ProteinModelPortal:Q9QY81 SMR:Q9QY81 IntAct:Q9QY81 STRING:Q9QY81
PhosphoSite:Q9QY81 PaxDb:Q9QY81 PRIDE:Q9QY81
Ensembl:ENSMUST00000032179 Ensembl:ENSMUST00000113509 GeneID:54563
KEGG:mmu:54563 UCSC:uc009cxt.1 InParanoid:Q9QY81 NextBio:311384
Bgee:Q9QY81 CleanEx:MM_NUP210 Genevestigator:Q9QY81
GermOnline:ENSMUSG00000030091 Uniprot:Q9QY81
Length = 1886
Score = 258 (95.9 bits), Expect = 7.4e-31, Sum P(4) = 7.4e-31
Identities = 129/579 (22%), Positives = 242/579 (41%)
Query: 567 DVLLVGGPEPWEEDVDFIETFEIFNGKHNHASDGVHIHVVSGSSKNLYGVF--CQTLGTF 624
++L GGP PW + + F + + + + + + V CQ LG
Sbjct: 661 EMLFEGGPRPWVLEPS--KFFRNVTSEDTGSISLSLLGPPASRNYQQHRVLMTCQALGEQ 718
Query: 625 ELVFKRGNLVGDDHPLPAVAEVSLSVTCSFPASIALLVDEPVNERKVIQTAAQADRS--P 682
+ GN +P PAV + C+ P+ + L+ + + + Q ++ P
Sbjct: 719 VIALSVGNRPSLSNPFPAVEPTVVKSICAPPSRLTLMPVYALPQLDLSCPLLQQNKQVVP 778
Query: 683 GRIRVTPVTV--ANGQTIRIAAVGIXXXXXXXXXXXXLCLGWELSNCDGLAYWDDAYGSQ 740
P+ A Q R L EL L DD G Q
Sbjct: 779 VSSHRNPLLDLGAYDQQGR-RFDNFSSLSIQWESSRPLLASIELDQPMQLVSQDDGNG-Q 836
Query: 741 KSASSWERFLVLQNESGLCVVRATASGFCDAKDGHHS-AQLLEISESFL--TDAVRLQLV 797
K + V SG + ATA+G+ + H S A++ + + + + ++ L LV
Sbjct: 837 KKLHGLQTVSV-HEASGTTAISATATGY---QQSHLSEARVKQPHDPLVPVSASIELILV 892
Query: 798 STLRVNPEYNLLFFNPDAKANLSIAGGSCFLEAAVNDSQVVEVI-QAPEGLRCLQLMLSP 856
+RV+PE ++ +P + L I GS + + +++V Q G+ + +L P
Sbjct: 893 EDVRVSPEEMTIYNHPGVQVELYITEGSGYFFLNTSTQDIIKVAYQDTRGVALVHPLL-P 951
Query: 857 KGLGTALVTVYDVGLAPPRAASALVQVADVD--WIKIMSGEEI----------------- 897
G++ V V+D+ LA P A A++ V+D+ +++++ EI
Sbjct: 952 ---GSSTVMVHDLCLAFPAPAKAIIHVSDIQELYVRVVDKVEIGKAVKAYVRVLDFYKKP 1008
Query: 898 --SLMYTYMDIRVHIEDHIVELID-DDATSSPDGGYFSMSSFKIMAKHLGITTLYVSARQ 954
+ +T+MD+++ I+ L+ D+A + Y ++F + +G T+L S
Sbjct: 1009 FLAKYFTFMDLKLQAASQIITLVTLDEALDN----Y--TATFLVHGVAIGQTSLSASVTD 1062
Query: 955 QSGHEILSQPIRVEVYAPPRIHPHDIFLVPGASYMLTLKGGPTVGVYVDYTSTDEEIATI 1014
+SG + S P ++EV+ P R+ P + L+ GA +T +GGP + ++ +E +A +
Sbjct: 1063 KSGQRVSSTPQQIEVFPPFRLIPRKVTLIIGAMMQITSEGGPQPQSNILFSINNESVAAV 1122
Query: 1015 HRSSGQLFAISPGNTTLIATVFG----NGDVVIC-QAFSSVKVGVPSSVTLNAQSDQLAV 1069
SSG + + GN +++ V G V+I Q V+V +V + A ++
Sbjct: 1123 S-SSGLVRGLMVGNGSVLGVVQAVDAETGKVIIVSQDLVEVEVLQLQAVRIRAPITRMRT 1181
Query: 1070 GHEMPIHP--LFPEGDVFSFYELCRN--YNWTIEDEKIL 1104
G +MP+ + FSF ++W++ +L
Sbjct: 1182 GTQMPVFVTGITSNQSPFSFGNAVPGLTFHWSVTKRDVL 1220
Score = 143 (55.4 bits), Expect = 7.4e-31, Sum P(4) = 7.4e-31
Identities = 80/331 (24%), Positives = 145/331 (43%)
Query: 40 ELENSGAFSDLYVVKGIGIGHEMVSVHLLETEFMHMADS-ILLTVAEAMSIEPPSPVFVL 98
E+E + D +V G+ G + + E + ++ + + L + E + + P V++L
Sbjct: 195 EMEKAAKQGDTILVSGMKTGSSKLKARIQEAVYKNVRPAEVRLLILENILLNPAYDVYLL 254
Query: 99 VGAALQYKLKVIR-GNIPQVVALPSPHHRWSVSNSSV-AQVDNMMG---LTQALRLGQTA 153
VG ++ YK++ IR G I ++ ++PS + + NS Q D LTQ
Sbjct: 255 VGTSIHYKVQKIRQGKITEL-SMPSDQYELQLQNSIPDPQGDPARPVAILTQDTSRVTAM 313
Query: 154 VIVEDTRVAGHTQVSSLNVV-LPDTLWLYISPLSISGDPVEGTKAIPSVARWFVVSGFQY 212
+ + V GH + LP++ +Y+ G V P RW + +G Y
Sbjct: 314 QMGQSNLVLGHRSIRMQGASRLPNST-IYVVEAGYLGFTV-----YPG-DRWVLETGHLY 366
Query: 213 LIQMKVFSQGPGSQEIYITESDDIKLSDN-QSECWRTFSMPNDLVLKHGWRNSRILKATS 271
I ++VF + S ++Y SD+I++ +E + S + H ++A
Sbjct: 367 AITIEVFDRS--SNKVY--PSDNIRIEAVLPAEFFEVLSSSQNGSYHH-------IRAIQ 415
Query: 272 QGLGKLTASLTYFSGLHDTKEVLKVVQEIMVCDRIKFSLDQTNGVSESIL-LPWAP--GI 328
G ++A+LT + D + V+Q + V ++ + + + SIL PW P G
Sbjct: 416 SGQTAISATLT---SVVDQDGGVHVLQ-VPVWNQQEVDIHIPITLYPSILTFPWQPKTGA 471
Query: 329 YQEVELMATGGCAKTSSDYKWFSSDMATVSI 359
YQ + A GG S + SS +ATV++
Sbjct: 472 YQYT-IKAHGGSGNFS--WSSSSSMVATVTV 499
Score = 127 (49.8 bits), Expect = 3.2e-29, Sum P(4) = 3.2e-29
Identities = 83/338 (24%), Positives = 137/338 (40%)
Query: 203 RWFVVSGFQYLIQMKVFSQGPGSQEIYITESDDIKLSDN-QSECWRTFSMPNDLVLKHGW 261
RW + +G Y I ++VF + S ++Y SD+I++ +E + S + H
Sbjct: 357 RWVLETGHLYAITIEVFDRS--SNKVY--PSDNIRIEAVLPAEFFEVLSSSQNGSYHH-- 410
Query: 262 RNSRILKATSQGLGKLTASLTYFSGLHDTKEVLKVVQEIMVCDRIKFSLDQTNGVSESIL 321
++A G ++A+LT + D + V+Q + V ++ + + + SIL
Sbjct: 411 -----IRAIQSGQTAISATLT---SVVDQDGGVHVLQ-VPVWNQQEVDIHIPITLYPSIL 461
Query: 322 -LPWAP--GIYQEVELMATGGCAKTSSDYKWFSSDMATVSITASGVVQAK-KPGKATVKV 377
PW P G YQ + A GG S ++ W SS ++T GV+ G + ++
Sbjct: 462 TFPWQPKTGAYQYT-IKAHGG----SGNFSWSSSSSMVATVTVKGVMTTSGDTGLSVIRA 516
Query: 378 VSIFDSFNYDEIVIEVSTPSSMVMLRNFPVETVVGSHLQAAVTMKTLNGAYFYRCDAFSS 437
+ + ++ E+ + V PSSM VE VG L+ +T ++G + S
Sbjct: 517 HDVQNPLHFGEMKVYVIEPSSMEFAP-CQVEARVGHTLELPLT---ISG---FMPGGGSE 569
Query: 438 SVNWKAGSESFIVLNATKKQPFLDKLGTVEHDISLHGPP-CSWAHLYASSSGRTMLHATL 496
V S +V+ + F G + GP CS + A + G T TL
Sbjct: 570 VVTLSDCSHFDLVVEVENQGVFQPLPGRLPP-----GPEHCSGVKVKADAQGST----TL 620
Query: 497 SKDYQHFDRSFDGPIVLKASSRIAAYPPLIVQQAGDGS 534
Y H D I L A + A P V GS
Sbjct: 621 LVSYTHGHVHLDAKITLAAYLPLKAVDPSSVAVVTLGS 658
Score = 114 (45.2 bits), Expect = 7.4e-31, Sum P(4) = 7.4e-31
Identities = 53/177 (29%), Positives = 79/177 (44%)
Query: 1276 IASCVRVAEVAQIRISNRYPLNVIH------LAVGAECEIPISYYDALGTPFHEAHNVIL 1329
I V+V+ V+ +RIS L+ H L +G + ++D+ G FH AHN +L
Sbjct: 1365 ILVAVKVSPVSYLRISMSPVLHTQHKEALTALPLGMTVTFIVHFHDSSGDIFH-AHNSVL 1423
Query: 1330 YHAETNYHDVVSINYTLNGSGKIYLKAKQHGRALVQVSMNRSPQKSDYVLVSVGAQLYPQ 1389
A TN D V I + I ++ G L+ V SD+V + V + P+
Sbjct: 1424 NFA-TNRDDFVQIGKGATNNTCI-IRTVSVGLTLLHVWDVEHLGLSDFVPLPVLQAITPE 1481
Query: 1390 -NPVLHVGGSLDF-SVEGFSDQVSGHWFSDNESVVHVHMPSGKAEAVGIGSTKVFFE 1444
+ + VG L SV VSG W S V++V +G A A GS V++E
Sbjct: 1482 LSGAVVVGDILCLASVLTSLGGVSGTWSSSASHVLYVDPKTGVAIARDAGSVTVYYE 1538
Score = 69 (29.3 bits), Expect = 2.2e-11, Sum P(4) = 2.2e-11
Identities = 22/65 (33%), Positives = 31/65 (47%)
Query: 934 SSFKIMAKHLGITTLYVSARQQSGHEILSQPIRVEVYAPPR-IHPHDIFLVP-GASYMLT 991
S K+ A G TTL VS GH L I + Y P + + P + +V G+S +
Sbjct: 606 SGVKVKADAQGSTTLLVSYTH--GHVHLDAKITLAAYLPLKAVDPSSVAVVTLGSSKEML 663
Query: 992 LKGGP 996
+GGP
Sbjct: 664 FEGGP 668
Score = 53 (23.7 bits), Expect = 1.1e-21, Sum P(4) = 1.1e-21
Identities = 15/44 (34%), Positives = 19/44 (43%)
Query: 14 HLLHVPLKDSPLSDCGGL-------CGDLDVQIELENSGAFSDL 50
H L +PL S GG C D+ +E+EN G F L
Sbjct: 551 HTLELPLTISGFMPGGGSEVVTLSDCSHFDLVVEVENQGVFQPL 594
Score = 52 (23.4 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 20/86 (23%), Positives = 40/86 (46%)
Query: 1261 LACIQAKDRSSGRIEIASCVRV-AEVAQIR-ISNRYPLNVIHLAVGAECEIPISYYDALG 1318
L +QA D +G++ I S V EV Q++ + R P+ + G + + ++ +
Sbjct: 1139 LGVVQAVDAETGKVIIVSQDLVEVEVLQLQAVRIRAPIT--RMRTGTQMPVFVTGITSNQ 1196
Query: 1319 TPFHEAHNV--ILYHAETNYHDVVSI 1342
+PF + V + +H DV+ +
Sbjct: 1197 SPFSFGNAVPGLTFHWSVTKRDVLDL 1222
Score = 49 (22.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 18/83 (21%), Positives = 35/83 (42%)
Query: 936 FKIMAKHLGITTLYVSARQQSG-HEILSQPIRVEVYAPPRIHPHDIFLVPGASYMLTLKG 994
F + +G++TL V A++ G ++ + ++V + RI + + L
Sbjct: 1339 FLVSGSGIGVSTLEVIAQEPFGTNQTILVAVKVSPVSYLRISMSPVLHTQHKEALTALPL 1398
Query: 995 GPTVGVYVDYTSTDEEIATIHRS 1017
G TV V + + +I H S
Sbjct: 1399 GMTVTFIVHFHDSSGDIFHAHNS 1421
Score = 45 (20.9 bits), Expect = 7.4e-21, Sum P(4) = 7.4e-21
Identities = 16/57 (28%), Positives = 24/57 (42%)
Query: 320 ILLPWAPGIYQEVELMATGGCAKTSSDYKWFSSDMATVSITASGVVQAKKPGKATVK 376
+LLP+ L A+ GC Y+W S+ SI G + + KA V+
Sbjct: 33 VLLPFTRATRVNFTLEASEGC------YRWSSTRPEVASIEPLGSSEQQCSQKAVVQ 83
Score = 42 (19.8 bits), Expect = 1.5e-20, Sum P(4) = 1.5e-20
Identities = 20/88 (22%), Positives = 35/88 (39%)
Query: 122 SPHHRWSVSNSSVAQVDNMMGLTQALRLGQTAVIVEDTRVAGHTQVSSLNVVLPDTLWLY 181
S + WS S+S VA V +T + G + + D + H + V+ P ++
Sbjct: 482 SGNFSWSSSSSMVATVTVKGVMTTSGDTGLSVIRAHDVQNPLHFGEMKVYVIEPSSM--E 539
Query: 182 ISPLSISGDPVEGTKAIPSVARWFVVSG 209
+P + V T +P F+ G
Sbjct: 540 FAPCQVEAR-VGHTLELPLTISGFMPGG 566
Score = 37 (18.1 bits), Expect = 7.4e-31, Sum P(4) = 7.4e-31
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 1137 ELGFIKTLYGRSAGRT 1152
+ F +YGR GRT
Sbjct: 1236 QYNFAMNVYGRVKGRT 1251
>UNIPROTKB|F1MPW7 [details] [associations]
symbol:NUP210 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005635 "nuclear envelope" evidence=IEA] Pfam:PF02368
GO:GO:0005635 InterPro:IPR003343 InterPro:IPR008964 SMART:SM00635
SUPFAM:SSF49373 GeneTree:ENSGT00390000009491 OMA:EDITTGQ
EMBL:DAAA02054639 EMBL:DAAA02054640 EMBL:DAAA02054641
IPI:IPI01017851 Ensembl:ENSBTAT00000043850 Uniprot:F1MPW7
Length = 1830
Score = 252 (93.8 bits), Expect = 1.1e-29, Sum P(5) = 1.1e-29
Identities = 133/579 (22%), Positives = 244/579 (42%)
Query: 567 DVLLVGGPEPWE-EDVDFIETFEIFNGKHNHASDGVHIHVVSGS-SKNLYGVFCQTLGTF 624
++L GGP PW E F + + + S + S + ++ V CQ LG
Sbjct: 604 EMLFEGGPGPWVLEPSKFFRN--VTSEDADSISLALFGPPASRNYQQHWILVTCQVLGEQ 661
Query: 625 ELVFKRGNLVGDDHPLPAVAEVSLSVTCSFPASIAL--LVDEPVNERK--VIQTAAQA-D 679
+ GN +P PA+ + C+ P+ + L + P + ++Q Q
Sbjct: 662 VIALTVGNKPSVTNPFPALEPAVVKFVCAPPSRLTLTPVYASPQLDLSCPLLQQNKQVVP 721
Query: 680 RSPGRIRVTPVTVANGQTIRIAAVGIXXXXXXXXXXXXLCLGWELSNCDGLAYWDDAYGS 739
S R + + + Q R L E + L DD G
Sbjct: 722 VSSHRSPLLDLAAYDQQGRRFD--NFSSLSIQWESSRPLLASIEPAPPLQLVSQDDGSG- 778
Query: 740 QKSASSWERFLVLQNESGLCVVRATASGFCDAKDGHHSAQLLEISESFLTD---AVRLQL 796
Q+ + V Q SG + ATA+G+ + H ++ LT ++ L L
Sbjct: 779 QRKLHGLQAISVHQ-ASGTTAISATATGY---QQPHLDLARVKQPHDPLTPVSVSIELML 834
Query: 797 VSTLRVNPEYNLLFFNPDAKANLSIAGGSCFLEAAVNDSQVVEVI-QAPEGLRCLQLMLS 855
V +RV+PE ++ +PD +A L + GS + + + VV V Q G+ + +L
Sbjct: 835 VEDVRVSPEELTIYNHPDVQAELHVREGSGYFFLNTSSADVVRVAYQEARGVATVHPLL- 893
Query: 856 PKGLGTALVTVYDVGLAPPRAASALVQVADVD--WIKIMSGEEIS--------------- 898
P GT+ + ++D+ LA P A A V V+D+ +I+++ EI
Sbjct: 894 P---GTSTIMIHDLCLAFPAPAKADVYVSDIQELYIRVVDKVEIGKTVKAHVRVLDFHKK 950
Query: 899 ---LMY-TYMDIRVHIEDHIVELIDDDATSSPDGGYFSMSSFKIMAKHLGITTLYVSARQ 954
Y +MD+++ IV L+ +PD Y +SF++ +G T+L +
Sbjct: 951 PFLAKYLAFMDLKLRAASQIVTLVA--LNEAPDD-Y--TASFRVHGVAIGQTSLTATVTD 1005
Query: 955 QSGHEILSQPIRVEVYAPPRIHPHDIFLVPGASYMLTLKGGPTVGVYVDYTSTDEEIATI 1014
++G I S P ++EV+ P R+ P + L+ GA+ +T +GGP + ++ ++E +A +
Sbjct: 1006 KAGQRINSAPQQIEVFPPFRLIPRKVTLIIGATMQITSEGGPQPQSNILFSMSNESVALV 1065
Query: 1015 HRSSGQLFAISPGNTTLIATVFG----NGD-VVICQAFSSVKVGVPSSVTLNAQSDQLAV 1069
+G + ++ G+ + V G VV+ Q V+V + +V + A ++
Sbjct: 1066 S-GAGLVRGLAVGHGAVSGVVQAVDAETGKLVVVSQDLVEVEVLLLQAVRIRAPITRMRT 1124
Query: 1070 GHEMPIHP--LFPEGDVFSFYELCRN--YNWTIEDEKIL 1104
G +MP++ + + FSF ++W++ +L
Sbjct: 1125 GTQMPVYVTGITNNQNPFSFGNAVPGLTFHWSVTKRDVL 1163
Score = 127 (49.8 bits), Expect = 1.1e-29, Sum P(5) = 1.1e-29
Identities = 73/325 (22%), Positives = 140/325 (43%)
Query: 40 ELENSGAFSDLYVVKGIGIGHEMVSVHLLETEF--MHMADSILLTVAEAMSIEPPSPVFV 97
E+E + D +V G+ G + + ET + +H A+ + L + E + + P V++
Sbjct: 139 EMEKAAKQGDTILVSGLKTGSSKLKARIQETVYKNVHPAE-VRLLILENILLNPAYDVYL 197
Query: 98 LVGAALQYKLKVIR-GNIPQVVALPSPHHRWSVSNS---------SVAQVDNMMGLTQAL 147
LVG +++Y+++ IR G I ++ ++PS + + N+ VA + A+
Sbjct: 198 LVGTSIRYRVQKIRQGKITEL-SMPSDQYELQLLNNVWDPQGDPRPVAVLAQDTSTVTAV 256
Query: 148 RLGQTAVIVEDTRVAGHTQVSSLNVV-LPDTLWLYISPLSISGDPVEGTKAIPSVARWFV 206
+LGQ+++++ GH + LP++ +Y+ G V P RW +
Sbjct: 257 QLGQSSLVL------GHRSIRMQGASRLPNST-IYVVEPGYLGFTVH-----PG-GRWVL 303
Query: 207 VSGFQYLIQMKVFSQGPGSQEIYITESDDIKLSDNQS-ECWRTFSMPNDLVLKHGWRNSR 265
+G Y I ++V + ++Y+ SD+I++ E + + + H
Sbjct: 304 ETGRLYEITVEVLDKS--GNKVYL--SDNIRIETMLPVEFFEVLASSQNGSYHH------ 353
Query: 266 ILKATSQGLGKLTASLTYF----SGLHDTKEVLKVVQEIMVCDRIKFSLDQTNGVSESIL 321
++AT +G + A+LT G+H + + QE+ + I +
Sbjct: 354 -VRATKRGQTVIEAALTSVVDQDGGVHTLRVPVWNQQEVEIHSPITLH-------PSILT 405
Query: 322 LPWAP--GIYQEVELMATGGCAKTS 344
PW P G YQ V + A GG S
Sbjct: 406 FPWQPKAGAYQYV-IKAHGGSGNFS 429
Score = 122 (48.0 bits), Expect = 1.1e-29, Sum P(5) = 1.1e-29
Identities = 58/225 (25%), Positives = 98/225 (43%)
Query: 1264 IQAKDRSSGRIEIASCVRVAEVAQIRISNRYPLN------VIHLAVGAECEIPISYYDAL 1317
+ A++ I V+V+ V+ +RIS L+ ++ L +G + ++D
Sbjct: 1296 VTAQEAFGANQTIIVAVKVSPVSYLRISMSPALHTRNKEALVALPLGVTVTFTVHFHDNS 1355
Query: 1318 GTPFHEAHNVILYHAETNYHDVVSINYTLNGSGKIYLKAKQHGRALVQVSMNRSPQKSDY 1377
G FH AHN +L A TN + V I + + ++ G L++ SD+
Sbjct: 1356 GDVFH-AHNSVLNFA-TNRDEFVQIGKGV-ANNTCVIRTVSVGLTLLRAWDAAHGGLSDF 1412
Query: 1378 VLVSVGAQLYPQ-NPVLHVGGSLDFSVEGFSDQ-VSGHWFSDNESVVHVHMPSGKAEAVG 1435
V + V + P + + VG L + S + V G W S S++HV +G A A
Sbjct: 1413 VPLPVLQAISPDLSGAVVVGDVLCLATVLVSPEGVPGTWSSSASSILHVDPKTGVAVAWQ 1472
Query: 1436 IGSTKVFFECPSMKLQTTVTVLSKNIVSIDAPKEVLTNIPYPTKG 1480
GS V++E S L+T K IV + P+ ++ P +G
Sbjct: 1473 PGSVTVYYEV-SGHLRTY-----KEIV-VSLPQRIVARYTRPVQG 1510
Score = 110 (43.8 bits), Expect = 2.4e-28, Sum P(4) = 2.4e-28
Identities = 54/219 (24%), Positives = 96/219 (43%)
Query: 203 RWFVVSGFQYLIQMKVFSQGPGSQEIYITESDDIKLSDNQS-ECWRTFSMPNDLVLKHGW 261
RW + +G Y I ++V + G++ +Y+ SD+I++ E + + + H
Sbjct: 300 RWVLETGRLYEITVEVLDKS-GNK-VYL--SDNIRIETMLPVEFFEVLASSQNGSYHH-- 353
Query: 262 RNSRILKATSQGLGKLTASLTYFSGLHDTKEVLKVVQEIMVCDRIKFSLDQTNGVSESIL 321
++AT +G + A+LT L+V V ++ + + + SIL
Sbjct: 354 -----VRATKRGQTVIEAALTSVVDQDGGVHTLRVP----VWNQQEVEIHSPITLHPSIL 404
Query: 322 -LPWAP--GIYQEVELMATGGCAKTSSDYKWFSSDMATVSITASGVVQA-KKPGKATVKV 377
PW P G YQ V + A GG S ++ W SS ++T GV+ G + ++
Sbjct: 405 TFPWQPKAGAYQYV-IKAHGG----SGNFSWSSSSSVVATVTVKGVMTTGSDTGVSVIQA 459
Query: 378 VSIFDSFNYDEIVIEVSTPSSMVMLRNFPVETVVGSHLQ 416
+ + ++ E+ + V PS M PVE VG L+
Sbjct: 460 HDVQNPLHFGEMKVYVIEPSGMEF-GPCPVEARVGQSLE 497
Score = 86 (35.3 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 54/216 (25%), Positives = 93/216 (43%)
Query: 903 YMDIRVHIEDHI-VELIDDDATSSPDGGYFSMSSFKIMAKHLGITTLYVSARQQSGHEIL 961
Y+ + IE + VE + A SS +G Y + + K + + L Q G L
Sbjct: 324 YLSDNIRIETMLPVEFFEVLA-SSQNGSYHHVRATK-RGQTVIEAALTSVVDQDGGVHTL 381
Query: 962 SQPI----RVEVYAPPRIHPHDIFLVP----GASYMLTLKGGPTVGVYVDYTSTDEEIAT 1013
P+ VE+++P +HP I P +Y +K G + ++S+ +AT
Sbjct: 382 RVPVWNQQEVEIHSPITLHP-SILTFPWQPKAGAYQYVIKAHGGSGNF-SWSSSSSVVAT 439
Query: 1014 IHRSSGQLFAISPGNTTLIATVFGNGDVVICQAFSSVKVGV--PSSVTLNAQSDQLAVGH 1071
+ G ++ G+ T ++ + + DV F +KV V PS + + VG
Sbjct: 440 V-TVKG---VMTTGSDTGVSVIQAH-DVQNPLHFGEMKVYVIEPSGMEFGPCPVEARVGQ 494
Query: 1072 --EMP--IHPLFPEG--DVFSFYELCRNYNWTIEDE 1101
E+P IH L P G DV + + C +++ +E E
Sbjct: 495 SLELPLRIHGLMPGGADDVVTLSD-CSHFDLVVEVE 529
Score = 69 (29.3 bits), Expect = 2.7e-11, Sum P(4) = 2.7e-11
Identities = 48/193 (24%), Positives = 76/193 (39%)
Query: 486 SSGRTMLHATLSKDYQ--HFDRSFDGPIVLKASSR-----IAAYPPLIVQQAGDGSG--- 535
SS R+ L + D Q FD +F + SSR I PPL + DGSG
Sbjct: 723 SSHRSPLLDLAAYDQQGRRFD-NFSSLSIQWESSRPLLASIEPAPPLQLVSQDDGSGQRK 781
Query: 536 -FGGYWFNLGQSETTTQMEALDKLYLVPRTHVDVLLVGGPE----PWEEDVDF--IETFE 588
G ++ Q+ TT + A Y P H+D+ V P P ++ +E
Sbjct: 782 LHGLQAISVHQASGTTAISATATGYQQP--HLDLARVKQPHDPLTPVSVSIELMLVEDVR 839
Query: 589 IFNGK---HNHASDGVHIHVVSGSSKNLYGVFCQTLGTFELVFKRGNLVGDDHPL-PAVA 644
+ + +NH +HV GS + + + + ++ V HPL P +
Sbjct: 840 VSPEELTIYNHPDVQAELHVREGSG--YFFLNTSSADVVRVAYQEARGVATVHPLLPGTS 897
Query: 645 EVSLSVTC-SFPA 656
+ + C +FPA
Sbjct: 898 TIMIHDLCLAFPA 910
Score = 54 (24.1 bits), Expect = 0.00012, Sum P(4) = 0.00012
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 836 QVVEVIQAPEGLRCLQLMLSPKGLGTALVTVYDVGLAPPRAAS 878
+V+E ++ G + + K LG Y VG++ P A S
Sbjct: 1659 EVLEHLEVKSGSPAVLAFVKEKSLGLPSFVTYTVGISDPAAGS 1701
Score = 53 (23.7 bits), Expect = 2.9e-23, Sum P(3) = 2.9e-23
Identities = 39/152 (25%), Positives = 64/152 (42%)
Query: 55 GIGIGHEMVSVHLLETEFMHMADSILLTVAEAMSIE-PPSPVFVLVGAALQYKLKV---I 110
G G ++ H ++ +H + + + V E +E P PV VG +L+ L++ +
Sbjct: 449 GSDTGVSVIQAHDVQNP-LHFGE-MKVYVIEPSGMEFGPCPVEARVGQSLELPLRIHGLM 506
Query: 111 RGNIPQVVALPSPHHR---WSVSNSSVAQV---------DNMMGLT-QALRLGQTAVIVE 157
G VV L H V N V Q D+ G+T +A G TA++V
Sbjct: 507 PGGADDVVTLSDCSHFDLVVEVENQGVFQPLPGRLRPGPDHCSGVTVRAEAQGYTALLVS 566
Query: 158 DTRVAGHTQVSSLNVVLPDTLWLY-ISPLSIS 188
GH +S+ V + L L + P S++
Sbjct: 567 YRH--GHVHLSA-RVTIAAYLPLKAVDPSSVA 595
Score = 48 (22.0 bits), Expect = 5.1e-22, Sum P(4) = 5.1e-22
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 32 CGDLDVQIELENSGAFSDL 50
C D+ +E+EN G F L
Sbjct: 519 CSHFDLVVEVENQGVFQPL 537
Score = 44 (20.5 bits), Expect = 1.1e-29, Sum P(5) = 1.1e-29
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 426 GAYFYRCDAFSSSVNWKAGSESFIVLNATKK 456
GAY Y A S N+ S S +V T K
Sbjct: 413 GAYQYVIKAHGGSGNFSWSSSSSVVATVTVK 443
Score = 43 (20.2 bits), Expect = 1.1e-29, Sum P(5) = 1.1e-29
Identities = 19/53 (35%), Positives = 24/53 (45%)
Query: 474 GPP-CSWAHLYASSSGRTMLHATLSKDYQHFDRSFDGPIVLKASSRIAAYPPL 525
GP CS + A + G T L + Y+H G + L A IAAY PL
Sbjct: 544 GPDHCSGVTVRAEAQGYTALLVS----YRH------GHVHLSARVTIAAYLPL 586
Score = 39 (18.8 bits), Expect = 8.2e-22, Sum P(3) = 8.2e-22
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 478 SWAHLYASSSGRTMLHATLS 497
S+ H+ A+ G+T++ A L+
Sbjct: 350 SYHHVRATKRGQTVIEAALT 369
Score = 37 (18.1 bits), Expect = 6.7e-21, Sum P(4) = 6.7e-21
Identities = 14/54 (25%), Positives = 22/54 (40%)
Query: 122 SPHHRWSVSNSSVAQVDNMMGLTQALRLGQTAVIVEDTRVAGHTQVSSLNVVLP 175
S + WS S+S VA V +T G + + D + H + V+ P
Sbjct: 425 SGNFSWSSSSSVVATVTVKGVMTTGSDTGVSVIQAHDVQNPLHFGEMKVYVIEP 478
>RGD|69339 [details] [associations]
symbol:Nup210 "nucleoporin 210" species:10116 "Rattus norvegicus"
[GO:0005635 "nuclear envelope" evidence=ISO] [GO:0005643 "nuclear
pore" evidence=TAS] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0017056 "structural constituent of nuclear pore" evidence=NAS]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IDA] [GO:0051028 "mRNA transport"
evidence=IEA] EMBL:Y00826 RGD:69339 GO:GO:0005789 GO:GO:0015031
GO:GO:0031965 GO:GO:0005643 GO:GO:0046983 GO:GO:0051028
GO:GO:0017056 eggNOG:NOG315446 HOGENOM:HOG000115312
HOVERGEN:HBG082098 KO:K14314 InterPro:IPR003343 InterPro:IPR008964
SMART:SM00635 SUPFAM:SSF49373 GeneTree:ENSGT00390000009491 CTD:23225
OrthoDB:EOG4RJG0P IPI:IPI00195875 PIR:S04921 RefSeq:NP_445774.1
UniGene:Rn.3189 STRING:P11654 PhosphoSite:P11654 PRIDE:P11654
Ensembl:ENSRNOT00000008888 GeneID:58958 KEGG:rno:58958
UCSC:RGD:69339 InParanoid:P11654 NextBio:611588
Genevestigator:P11654 GermOnline:ENSRNOG00000005390 Uniprot:P11654
Length = 1886
Score = 245 (91.3 bits), Expect = 2.7e-29, Sum P(3) = 2.7e-29
Identities = 129/579 (22%), Positives = 237/579 (40%)
Query: 567 DVLLVGGPEPW--EEDVDFIETFEIFNGKHNHASDGVHIHVVSGSSKNLYGVFCQTLGTF 624
++L GGP PW E F G + + G + L V CQ LG
Sbjct: 661 EMLFEGGPRPWVLEPSKFFRNVTSEDTGSISLSLLGPPASRNYQQHRVL--VTCQALGEQ 718
Query: 625 ELVFKRGNLVGDDHPLPAVAEVSLSVTCSFPASIALLVDEPVNERKVIQTAAQADRS--P 682
+ GN +P PAV + C+ P+ + L+ + + + Q ++ P
Sbjct: 719 VIALSVGNRPSLSNPFPAVEPTVVKSVCAPPSRLTLMPVYALPQLDLSCPLLQQNKQVVP 778
Query: 683 GRIRVTPVTV--ANGQTIRIAAVGIXXXXXXXXXXXXLCLGWELSNCDGLAYWDDAYGSQ 740
P+ A Q R L E+ L DD G Q
Sbjct: 779 VSSHRNPLLDLGAYDQQGR-RFDNFSSLSIQWESFRPLLASIEVDQPMQLVSQDDGNG-Q 836
Query: 741 KSASSWERFLVLQNESGLCVVRATASGFCDAKDGHHSAQ-LLEISESFL--TDAVRLQLV 797
K + V SG + ATA+G+ + H SA + ++ + + + ++ L LV
Sbjct: 837 KKLHGLQTVSV-HEASGTTAISATATGY---QQSHLSAAGVKQLRDPLVPVSASIELILV 892
Query: 798 STLRVNPEYNLLFFNPDAKANLSIAGGSCFLEAAVNDSQVVEVI-QAPEGLRCLQLMLSP 856
+RV+PE ++ +P + L I GS + + ++ V Q G+ M+ P
Sbjct: 893 EDVRVSPEEVTIYNHPGVQVELHITEGSGYFFLNTSTQDIINVAYQDTRGVA----MVHP 948
Query: 857 KGLGTALVTVYDVGLAPPRAASALVQVADVD--WIKIMSGEEI----------------- 897
G++ V V+D+ L P A A + V+D+ +++++ EI
Sbjct: 949 LFPGSSTVMVHDLCLTFPAPAKATIHVSDIQELYVRVVDKVEIGKAVKAYVRVLDFYKKP 1008
Query: 898 --SLMYTYMDIRVHIEDHIVELID-DDATSSPDGGYFSMSSFKIMAKHLGITTLYVSARQ 954
+ +T+MD+++ I+ L+ D+A + Y ++F + +G T+L S
Sbjct: 1009 FLAKYFTFMDLKLRAASQIITLVTLDEALDN----Y--TATFLVHGVAIGQTSLSASVTD 1062
Query: 955 QSGHEILSQPIRVEVYAPPRIHPHDIFLVPGASYMLTLKGGPTVGVYVDYTSTDEEIATI 1014
+SG + S ++EV+ P R+ P + L+ GA +T +GGP + ++ +E +A +
Sbjct: 1063 KSGQRVSSTAQQIEVFPPFRLIPRKVTLIIGAMIQITSEGGPQPQSNILFSINNESVAAV 1122
Query: 1015 HRSSGQLFAISPGNTTLIATVFG----NGDVVIC-QAFSSVKVGVPSSVTLNAQSDQLAV 1069
S+G + + GN +++ V G V+I Q V+V +V + A ++
Sbjct: 1123 S-SAGLVRGLMVGNGSVLGVVQAVDAETGKVIIVSQDHVEVEVLQLQAVRIRAPITRMRT 1181
Query: 1070 GHEMPIHP--LFPEGDVFSFYELCRN--YNWTIEDEKIL 1104
G +MP++ + FSF ++W++ +L
Sbjct: 1182 GTQMPVYVTGITSNQSPFSFGNAVPGLTFHWSVTKRDVL 1220
Score = 138 (53.6 bits), Expect = 2.7e-29, Sum P(3) = 2.7e-29
Identities = 77/322 (23%), Positives = 140/322 (43%)
Query: 40 ELENSGAFSDLYVVKGIGIGHEMVSVHLLETEFMHMADS-ILLTVAEAMSIEPPSPVFVL 98
E+E + D +V G+ G + + E + ++ + + L + E + + P V++L
Sbjct: 195 EMEKAAKQGDTILVSGMKTGSSKLKARIQEAVYKNVRPAEVRLLILENILLNPAYDVYLL 254
Query: 99 VGAALQYKLKVIR-GNIPQVVALPSPHHRWSVSNSSV-AQVDN---MMGLTQALRLGQTA 153
VG ++ YK++ IR G I ++ ++PS + + NS Q D + LTQ
Sbjct: 255 VGTSIHYKVQKIRQGKITEL-SMPSDQYELQLQNSIPDPQGDPARPVAVLTQDTSRVTAM 313
Query: 154 VIVEDTRVAGHTQVSSLNVV-LPDTLWLYISPLSISGDPVEGTKAIPSVARWFVVSGFQY 212
+ + V GH + LP++ +Y+ G V P RW + +G Y
Sbjct: 314 QMGQSNLVLGHRSIRMQGASRLPNST-IYVVEAGYLGFTVH-----PG-DRWVLETGHLY 366
Query: 213 LIQMKVFSQGPGSQEIYITESDDIKLSDN-QSECWRTFSMPNDLVLKHGWRNSRILKATS 271
+ ++VF + S ++Y SD+I++ +E + S + H ++A
Sbjct: 367 AVTIEVFDRS--SNKVY--PSDNIRIEAVFPAEFFEVLSSSQNGSYHH-------VRAIQ 415
Query: 272 QGLGKLTASLTYFSGLHDTKEVLKVVQEIMVCDRIKFSLDQTNGVSESIL-LPWAP--GI 328
G ++ASLT + D + V+Q + V ++ + + + SIL PW P G
Sbjct: 416 SGQTTISASLT---SVVDQDGGVHVLQ-VPVWNQQEVDIHIPITLYPSILTFPWQPKTGA 471
Query: 329 YQEVELMATGGCAK---TSSDY 347
YQ + A GG +SS Y
Sbjct: 472 YQYT-IKAHGGSGNFTWSSSSY 492
Score = 121 (47.7 bits), Expect = 1.6e-27, Sum P(3) = 1.6e-27
Identities = 57/227 (25%), Positives = 102/227 (44%)
Query: 203 RWFVVSGFQYLIQMKVFSQGPGSQEIYITESDDIKLSDN-QSECWRTFSMPNDLVLKHGW 261
RW + +G Y + ++VF + S ++Y SD+I++ +E + S + H
Sbjct: 357 RWVLETGHLYAVTIEVFDRS--SNKVY--PSDNIRIEAVFPAEFFEVLSSSQNGSYHH-- 410
Query: 262 RNSRILKATSQGLGKLTASLTYFSGLHDTKEVLKVVQEIMVCDRIKFSLDQTNGVSESIL 321
++A G ++ASLT + D + V+Q + V ++ + + + SIL
Sbjct: 411 -----VRAIQSGQTTISASLT---SVVDQDGGVHVLQ-VPVWNQQEVDIHIPITLYPSIL 461
Query: 322 -LPWAP--GIYQEVELMATGGCAKTSSDYKWFSSDMATVSITASGVVQAK-KPGKATVKV 377
PW P G YQ + A GG S ++ W SS ++T GV+ G + ++
Sbjct: 462 TFPWQPKTGAYQYT-IKAHGG----SGNFTWSSSSYMVATVTVKGVMTTGGDTGLSVIRA 516
Query: 378 VSIFDSFNYDEIVIEVSTPSSMVMLRNFPVETVVGSHLQAAVTMKTL 424
+ + ++ E+ + V PSSM VE VG L+ +T+ L
Sbjct: 517 HDVQNPLHFGEMKVYVIEPSSMEFAP-CQVEARVGHTLELPLTISGL 562
Score = 103 (41.3 bits), Expect = 2.7e-29, Sum P(3) = 2.7e-29
Identities = 54/194 (27%), Positives = 86/194 (44%)
Query: 1280 VRVAEVAQIRISNRYPLNVIH------LAVGAECEIPISYYDALGTPFHEAHNVILYHAE 1333
V+V+ ++ +RIS L+ H L +G + ++D+ G FH AHN L A
Sbjct: 1369 VKVSPISYLRISMSPVLHTQHKEVLTALPLGMTVTFTVHFHDSSGDIFH-AHNSDLNFA- 1426
Query: 1334 TNYHDVVSINYTLNGSGKIYLKAKQHGRALVQVSMNRSPQKSDYVLVSVGAQLYPQ-NPV 1392
TN D V I + I ++ G L+ V SD+V + V + P+ +
Sbjct: 1427 TNRDDFVQIGKGATNNTCI-IRTVSVGLTLLHVWDVEHLGLSDFVPLPVLQAITPELSGA 1485
Query: 1393 LHVGGSLDFSVEGFS-DQVSGHWFSDNESVVHVHMPSGKAEAVGIGSTKVFFECPS-MK- 1449
+ VG L + S VSG W S +V++V +G A A G V++E +K
Sbjct: 1486 VVVGDILCLASVLISLGGVSGTWSSSAGNVLYVDPKTGVAIARDAGPVTVYYEIAGHLKT 1545
Query: 1450 LQTTVTVLSKNIVS 1463
+ V V + IV+
Sbjct: 1546 FKEIVVVTPQKIVA 1559
Score = 72 (30.4 bits), Expect = 2.7e-11, Sum P(3) = 2.7e-11
Identities = 29/108 (26%), Positives = 49/108 (45%)
Query: 893 SGEEISLM-YTYMDIRVHIEDH-IVELIDDDATSSPDGGYFSMSSFKIMAKHLGITTLYV 950
S E ++L ++ D+ V +E+ + + + P+ S K+ A G TTL V
Sbjct: 567 SSEVVTLSDCSHFDLVVEVENQGVFQPLPGRLPPGPE----HCSGVKVRADAQGSTTLLV 622
Query: 951 SARQQSGHEILSQPIRVEVYAPPR-IHPHDIFLVP-GASYMLTLKGGP 996
S GH L I + Y P + + P + +V G+S + +GGP
Sbjct: 623 SYTH--GHVHLGAKITLAAYLPLKAVDPSSVAVVTLGSSKEMLFEGGP 668
Score = 55 (24.4 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 20/86 (23%), Positives = 40/86 (46%)
Query: 1261 LACIQAKDRSSGRIEIASCVRV-AEVAQIR-ISNRYPLNVIHLAVGAECEIPISYYDALG 1318
L +QA D +G++ I S V EV Q++ + R P+ + G + + ++ +
Sbjct: 1139 LGVVQAVDAETGKVIIVSQDHVEVEVLQLQAVRIRAPIT--RMRTGTQMPVYVTGITSNQ 1196
Query: 1319 TPFHEAHNV--ILYHAETNYHDVVSI 1342
+PF + V + +H DV+ +
Sbjct: 1197 SPFSFGNAVPGLTFHWSVTKRDVLDL 1222
Score = 53 (23.7 bits), Expect = 5.3e-20, Sum P(4) = 5.3e-20
Identities = 26/94 (27%), Positives = 43/94 (45%)
Query: 365 VQAKKPGKATVK--VVSIFDSFNYDEIVIEVSTPSSMVMLRNFPVETVVGSHLQAAVTMK 422
V+A + G+ T+ + S+ D + V++V + + + P+ T+ S L K
Sbjct: 411 VRAIQSGQTTISASLTSVVDQ-DGGVHVLQVPVWNQQEVDIHIPI-TLYPSILTFPWQPK 468
Query: 423 TLNGAYFYRCDAFSSSVNWKAGSESFIVLNATKK 456
T GAY Y A S N+ S S++V T K
Sbjct: 469 T--GAYQYTIKAHGGSGNFTWSSSSYMVATVTVK 500
Score = 51 (23.0 bits), Expect = 5.4e-19, Sum P(4) = 5.4e-19
Identities = 15/44 (34%), Positives = 19/44 (43%)
Query: 14 HLLHVPLKDSPLSDCGGL-------CGDLDVQIELENSGAFSDL 50
H L +PL S L G C D+ +E+EN G F L
Sbjct: 551 HTLELPLTISGLMPGGSSEVVTLSDCSHFDLVVEVENQGVFQPL 594
Score = 45 (20.9 bits), Expect = 5.3e-20, Sum P(4) = 5.3e-20
Identities = 16/57 (28%), Positives = 24/57 (42%)
Query: 320 ILLPWAPGIYQEVELMATGGCAKTSSDYKWFSSDMATVSITASGVVQAKKPGKATVK 376
+LLP+ L A+ GC Y+W S+ SI G + + KA V+
Sbjct: 33 VLLPFTRATRVNFTLEASEGC------YRWSSTRPEVASIEPLGSSEQQCSQKAVVQ 83
Score = 40 (19.1 bits), Expect = 4.5e-08, Sum P(3) = 4.5e-08
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 546 SETTTQMEALDKLYLVPR-------THVDVLLVGGPEP 576
S T Q+E L+PR + + GGP+P
Sbjct: 1069 SSTAQQIEVFPPFRLIPRKVTLIIGAMIQITSEGGPQP 1106
Score = 39 (18.8 bits), Expect = 1.4e-18, Sum P(4) = 1.4e-18
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 478 SWAHLYASSSGRTMLHATLS 497
S+ H+ A SG+T + A+L+
Sbjct: 407 SYHHVRAIQSGQTTISASLT 426
Score = 38 (18.4 bits), Expect = 0.00087, Sum P(4) = 0.00087
Identities = 16/70 (22%), Positives = 27/70 (38%)
Query: 1259 NHLACIQAKDRSSGRIEIASCVRVAEVAQIRISNRYPLNVIHLAVGAECEIPI-SYYDAL 1317
+HL+ K + +++ + + V +R+S H V E I S Y L
Sbjct: 866 SHLSAAGVKQLRDPLVPVSASIELILVEDVRVSPEEVTIYNHPGVQVELHITEGSGYFFL 925
Query: 1318 GTPFHEAHNV 1327
T + NV
Sbjct: 926 NTSTQDIINV 935
Score = 37 (18.1 bits), Expect = 4.0e-21, Sum P(4) = 4.0e-21
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 1109 GDQLHSENQDLQSAAS 1124
GD H+ N DL A +
Sbjct: 1413 GDIFHAHNSDLNFATN 1428
Score = 37 (18.1 bits), Expect = 4.0e-21, Sum P(4) = 4.0e-21
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 1283 AEVAQIRISNRYPLNVIHL 1301
A A+I +SN YP + + +
Sbjct: 1693 ANQAEILLSNHYPSSEVKI 1711
Score = 37 (18.1 bits), Expect = 5.4e-19, Sum P(4) = 5.4e-19
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 311 DQTNGVSESILLPWAPGIYQEVELMAT 337
+ T +S S+L P A YQ+ ++ T
Sbjct: 685 EDTGSISLSLLGPPASRNYQQHRVLVT 711
Score = 37 (18.1 bits), Expect = 0.00087, Sum P(4) = 0.00087
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 1362 ALVQVSMNRSPQKSDYVLVSV 1382
A++Q++ PQ +L S+
Sbjct: 1094 AMIQITSEGGPQPQSNILFSI 1114
>WB|WBGene00003798 [details] [associations]
symbol:npp-12 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0005643 "nuclear pore" evidence=IDA]
Pfam:PF02368 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
GO:GO:0005643 eggNOG:NOG315446 KO:K14314 InterPro:IPR003343
InterPro:IPR008964 SMART:SM00635 SUPFAM:SSF49373
GeneTree:ENSGT00390000009491 OMA:DIICFDS EMBL:FO081319 PIR:T28969
RefSeq:NP_491855.1 ProteinModelPortal:P91495 SMR:P91495
STRING:P91495 PaxDb:P91495 EnsemblMetazoa:T23H2.1 GeneID:172348
KEGG:cel:CELE_T23H2.1 UCSC:T23H2.1 CTD:172348 WormBase:T23H2.1
HOGENOM:HOG000019782 InParanoid:P91495 NextBio:875149
Uniprot:P91495
Length = 1847
Score = 166 (63.5 bits), Expect = 7.1e-20, Sum P(5) = 7.1e-20
Identities = 73/329 (22%), Positives = 137/329 (41%)
Query: 754 NESGLCVVRATASGFCDAKDGHHSAQL-LEISESFLTDAVRLQLVSTLRVNPEYNLLFFN 812
++SGL V DA G Q+ ++ L+ + + L V P +L+
Sbjct: 778 SDSGLLTVNRHGIE-ADATSGKKEGQVTIQAQAGSLSTKYEITVKKGLNVEPARLVLWNE 836
Query: 813 PDAKANLSIAGGSCFLEAAVNDSQVVEVIQAPEGLRCLQLMLSPKGLGTALVTVYDVGLA 872
+K +I GGS D+ LR L ++PK G + + D L
Sbjct: 837 AVSKGTFTITGGSGHFHV---DNLPTSDSPVAIALRARSLTVTPKNNGQVNLRISDACLV 893
Query: 873 PPRAASALVQVADVDWIKIMS------GEEISLMYTYMD-IRVHIEDHIVELIDDDATSS 925
A A V++AD+ + I + G+E+ + D E L D +S
Sbjct: 894 GQHA-DASVRIADIHSLAIDAPQFVEIGQEVEVEILAQDETGASFEKEHRPLADAQLDAS 952
Query: 926 PDGGYFSMSS---FKIMAKHLGITTLYVSARQQSGHEILSQPIRVEVYAPPRIHPHDIFL 982
+ + + + A +G +L S++ SG + S+P V++++P + P + L
Sbjct: 953 NNHVILTKVDGLRYTLRANSIGTVSLSASSKSSSGRVLSSRPHTVQIFSPIFLQPKRLTL 1012
Query: 983 VPGASYMLTLKGGPTVGVYVDYTSTDEEIATIHRSSGQLFAISPGNTTLIATV-FGNGDV 1041
+P + + L + GGP +D++ + IA+I ++ + + G T + TV G+G V
Sbjct: 1013 IPDSKFQLEVVGGPQPTPPLDFSLNNSMIASIEPNA-LITSSELGYTAITGTVRVGDGHV 1071
Query: 1042 VICQAFSSVKVGVPSSVTLNAQSDQLAVG 1070
+ ++V + L+A S ++ G
Sbjct: 1072 TLDTVV--LRVASLGGIILSASSRKVETG 1098
Score = 122 (48.0 bits), Expect = 7.1e-20, Sum P(5) = 7.1e-20
Identities = 35/184 (19%), Positives = 86/184 (46%)
Query: 39 IELENSGAFSDLYVVKGIGIGHEMVSVHLLETEFMHMA-DSILLTVAEAMSIEPPSPVFV 97
++LE + L +++G+G G ++ + +A ++ L V + + P V++
Sbjct: 189 VKLEKNRKKGYLILIEGVGTGTATLTTKFSDAYLQKVAAHNVELAVVANLLLVPSQDVYL 248
Query: 98 LVGAALQYKLKVIRGNIPQVVALPSPHHRWSVSNSSVAQVDNMMGLTQALRLGQTAVIVE 157
V + L +++ +++ ++V +P+P + + VA +D +AL +G TAV +
Sbjct: 249 PVHSVLPFQVLIVKQRGTEIVNMPNPSYELQIDGGDVASLDKKSSSVRALTIGNTAVHL- 307
Query: 158 DTRVAGHTQVSSLNVVLPDTLWLYISPLSISGDPVEGTKAIPSVARWFVVSGFQYLIQMK 217
++ H V + + P + +++ + + V+ S W + +G QY I ++
Sbjct: 308 ---LSSHVDVRAKAGLRPPSTVIHV----VDAESVQWHV---SGDNWMLETGKQYTINVE 357
Query: 218 VFSQ 221
+ +
Sbjct: 358 LLDE 361
Score = 77 (32.2 bits), Expect = 7.1e-07, Sum P(3) = 7.1e-07
Identities = 40/136 (29%), Positives = 65/136 (47%)
Query: 909 HIEDHIVELIDDDATSSPDGGYFSMSSFKIMAKHLGITTLYVSARQQSGHEIL-SQPI-- 965
HI++ + +D S +G +F ++ K + T +V+ G+ I S I
Sbjct: 377 HIDEQFLH-VD---FKSENGTWFLVTPLK--PSKTTLRTKFVAIIDAKGNRIAQSGKIGG 430
Query: 966 --RVEVYAPPRIHPHDIFLVPGASYM-----LTLKGGPTVGVYVDYTSTDEEIATIHRSS 1018
RV + P RI P I+L P S LT GG G++ ++TS D +AT+ +
Sbjct: 431 EQRVTIVDPVRIVPPVIYL-PFVSEKRSQIDLTATGGS--GLF-EWTSEDGHVATVDLLT 486
Query: 1019 GQLFAISPGNTTLIAT 1034
G++ A S G+T + AT
Sbjct: 487 GRMTANSLGSTKVKAT 502
Score = 74 (31.1 bits), Expect = 7.1e-20, Sum P(5) = 7.1e-20
Identities = 29/99 (29%), Positives = 46/99 (46%)
Query: 564 THVDVLLVGGPEPWEED-VDFIETFEIFNGKHNHASDGVHIHVVSGSSKNLYGVFCQTLG 622
TH + + GGP PW D +F +T E K + + V + K L+ C +
Sbjct: 639 TH-PLTVSGGPRPWILDPANFYKTQET---KQSQ------LQVTFENEKVLFK--CGSSE 686
Query: 623 TFELVFKR-GNLVGDDHPLPAVAEVSLSVTCSFPASIAL 660
E V R GNL PLP +E+++S+ C+ P + +
Sbjct: 687 VTEAVRLRIGNLKSSTLPLPIHSEITVSICCAKPTRLEI 725
Score = 70 (29.7 bits), Expect = 7.1e-20, Sum P(5) = 7.1e-20
Identities = 37/163 (22%), Positives = 69/163 (42%)
Query: 1235 SEKNEAASKDDISIDGDTIKTTSSNHLACIQAKDRSSGRIE-IASCVRVAEVAQIRISNR 1293
S ++ +S+ IS DG I T A I ++ +S E + V V+ VA + +
Sbjct: 1236 SVPSDFSSRIVISADGHLI-TNGKEGSAAITVRNVNSPDNETVLIPVTVSRVASLDVHPT 1294
Query: 1294 YPLN-------VIHLAVGAECEIPISYYDALGTPFHEAHNVILYHAETNYHDVVSINYTL 1346
L +IHL VGA+ ++ + DA G A N I + D+ I T
Sbjct: 1295 IELKSAFENSPLIHLPVGAQIQLNVVPRDARGRRLAAASNSINFRPHR--FDLTDIVAT- 1351
Query: 1347 NGSGKIYLKAKQHGRALVQVSMNRSPQKSDYVLVSVGAQLYPQ 1389
N + + + K G ++++ + + ++ +S + P+
Sbjct: 1352 NSNQTLTITLKTAGDTVLRIGDASNTHIATFIRLSASESILPR 1394
Score = 62 (26.9 bits), Expect = 7.1e-20, Sum P(5) = 7.1e-20
Identities = 22/69 (31%), Positives = 33/69 (47%)
Query: 310 LDQTNGVSESILLPWAPGIYQEVELMATGGCAKTSSDYKWFSSD--MATVSITASGVVQA 367
+D V I LP+ +++L ATGG S ++W S D +ATV + +G + A
Sbjct: 437 VDPVRIVPPVIYLPFVSEKRSQIDLTATGG----SGLFEWTSEDGHVATVDLL-TGRMTA 491
Query: 368 KKPGKATVK 376
G VK
Sbjct: 492 NSLGSTKVK 500
Score = 54 (24.1 bits), Expect = 1.4e-11, Sum P(4) = 1.4e-11
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 127 WSVSNSSVAQVDNMMGLTQALRLGQTAVIVEDTRVAGHTQVSSLNVV 173
W+ + VA VD + G A LG T V D R ++S++++
Sbjct: 472 WTSEDGHVATVDLLTGRMTANSLGSTKVKATDKRNDQLRDIASVHIL 518
Score = 50 (22.7 bits), Expect = 0.00057, Sum P(4) = 0.00057
Identities = 48/232 (20%), Positives = 83/232 (35%)
Query: 1247 SIDGDTIKTTSSNHLACIQAKDRSSGRIEIASCVRVAE-VAQIRISNRYPLNVIHLAVGA 1305
S+ +K T + Q +D +S I S + E V + + + LN+ A G
Sbjct: 493 SLGSTKVKATDKRN---DQLRDIASVHILEVSGIGFGETVRETFVGDTLTLNI--KATGL 547
Query: 1306 ECE-IPISYYDALGTPFHE--AHNVILYHAETNYHDVVSINYTLNGSGKIYLKAKQHGRA 1362
+ + + D H N +L H E++ + + T G G I K G A
Sbjct: 548 TSDGLLVEMSDCRNIRAHVQITDNALLRH-ESSADSSLPMMGT--GCGTITFKGLSSGDA 604
Query: 1363 LVQVSMNRSPQKSDYVLVSVGAQLYPQNPVLHVGGSLDFSVEGFSDQVSGHWFSDNESVV 1422
V +S D V V + ++ + +G + +V G W D +
Sbjct: 605 RVSISYLGHKASID-VAVYEKLSISEESSSIALGSTHPLTVSGGPRP----WILDPANFY 659
Query: 1423 HVHMPSGKAEAVGIGSTKVFFECPSMKLQTTVTVLSKNIVSIDAPKEVLTNI 1474
V + KV F+C S ++ V + N+ S P + + I
Sbjct: 660 KTQETKQSQLQVTFENEKVLFKCGSSEVTEAVRLRIGNLKSSTLPLPIHSEI 711
Score = 47 (21.6 bits), Expect = 2.7e-05, Sum P(4) = 2.7e-05
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 557 KLYLVPRTHVDVLLVGGPEPWEEDVDF 583
+L L+P + + +VGGP+P +DF
Sbjct: 1009 RLTLIPDSKFQLEVVGGPQP-TPPLDF 1034
Score = 47 (21.6 bits), Expect = 0.00071, Sum P(4) = 0.00071
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 348 KWFSSDMATVSITASGV----VQAKKPGKATVKVVSIFDSFNYDEIVIE 392
KW +SD +++ G+ KK G+ T++ + S Y EI ++
Sbjct: 774 KWTTSDSGLLTVNRHGIEADATSGKKEGQVTIQAQAGSLSTKY-EITVK 821
Score = 46 (21.3 bits), Expect = 3.3e-05, Sum P(4) = 3.3e-05
Identities = 28/115 (24%), Positives = 48/115 (41%)
Query: 1007 TDEEIATIHRSSGQ--LFAISPGNTTLIATVFGNGDVVICQAF----SSVKVGVPSSVTL 1060
TD + H SS L + G T+ +GD + ++ +S+ V V +++
Sbjct: 569 TDNALLR-HESSADSSLPMMGTGCGTITFKGLSSGDARVSISYLGHKASIDVAVYEKLSI 627
Query: 1061 NAQSDQLAVGHEMPIHPLFPEG-------DVFSFYELCRN----YNWTIEDEKIL 1104
+ +S +A+G HPL G D +FY+ T E+EK+L
Sbjct: 628 SEESSSIALGST---HPLTVSGGPRPWILDPANFYKTQETKQSQLQVTFENEKVL 679
Score = 44 (20.5 bits), Expect = 5.1e-05, Sum P(4) = 5.1e-05
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 965 IRVEVYAPPRIHPHDIFLVPGASYMLTLKGGP 996
I V VY I + G+++ LT+ GGP
Sbjct: 617 IDVAVYEKLSISEESSSIALGSTHPLTVSGGP 648
Score = 38 (18.4 bits), Expect = 1.1e-16, Sum P(5) = 1.1e-16
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 1302 AVGAECEIP-ISYYDALGTPF 1321
++ EC I +DA+G PF
Sbjct: 1511 SIYGECTADQIRSFDAIGAPF 1531
Score = 38 (18.4 bits), Expect = 8.0e-05, Sum P(4) = 8.0e-05
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 1461 IVSIDAPKEVLTNIPYPTKGYTFAVRFGDTH 1491
I SI+ P ++T+ T VR GD H
Sbjct: 1041 IASIE-PNALITSSELGYTAITGTVRVGDGH 1070
Score = 37 (18.1 bits), Expect = 1.7e-11, Sum P(5) = 1.7e-11
Identities = 27/106 (25%), Positives = 49/106 (46%)
Query: 95 VFVLVGAALQYKLKVIRGNIPQVVALPSPHHRWSVSNSSVAQVDNMMGLTQALRLGQTAV 154
V LV + Y+L N+P+V+ P+H +V S V +V + G R + +
Sbjct: 9 VLALVQITISYRL-----NVPRVLL---PYHP-TVPVSFVLEVTHPTGGCFTWRSTRPDI 59
Query: 155 I-VE--DTRVAGHTQVSSL-NVVLPDTLWLY-ISPLSISGDPVEGT 195
+ V+ +T AG + + + +V P T+ +S + + D GT
Sbjct: 60 VSVKRIETNEAGCSDKAEIRSVAKPGTVGSSELSAVIFAEDKGSGT 105
>FB|FBgn0033039 [details] [associations]
symbol:Gp210 "Gp210 ortholog (H. sapiens)" species:7227
"Drosophila melanogaster" [GO:0016021 "integral to membrane"
evidence=NAS] [GO:0007611 "learning or memory" evidence=IMP]
[GO:0008355 "olfactory learning" evidence=IMP] [GO:0044611 "nuclear
pore inner ring" evidence=IDA] [GO:0044615 "nuclear pore nuclear
basket" evidence=IDA] [GO:0006999 "nuclear pore organization"
evidence=ISS] [GO:0006606 "protein import into nucleus"
evidence=ISS] [GO:0070762 "nuclear pore transmembrane ring"
evidence=ISS] EMBL:AE013599 GO:GO:0008355 eggNOG:NOG315446
KO:K14314 InterPro:IPR008964 SUPFAM:SSF49373
GeneTree:ENSGT00390000009491 RefSeq:NP_610184.2 UniGene:Dm.3364
ProteinModelPortal:A1Z6H7 SMR:A1Z6H7 IntAct:A1Z6H7 STRING:A1Z6H7
PaxDb:A1Z6H7 PRIDE:A1Z6H7 EnsemblMetazoa:FBtr0086044 GeneID:35512
KEGG:dme:Dmel_CG7897 UCSC:CG7897-RA CTD:35512 FlyBase:FBgn0033039
InParanoid:A1Z6H7 OMA:DIICFDS OrthoDB:EOG4PNVXN PhylomeDB:A1Z6H7
GenomeRNAi:35512 NextBio:793773 Bgee:A1Z6H7 Uniprot:A1Z6H7
Length = 1876
Score = 113 (44.8 bits), Expect = 1.0e-06, Sum P(6) = 1.0e-06
Identities = 71/316 (22%), Positives = 131/316 (41%)
Query: 788 LTDAVRLQLVSTLRVNPEYNLLFFNPDAKANLSIAGGSCFLEAAVNDSQVVEV------- 840
+ + +RL V++ + +Y +F + IA GS +L+ ++++ +V+V
Sbjct: 872 IENEIRLHAVNSTLLPKDYMSIFLASGYSERIPIAQGSGYLQLELSEAGIVQVEYNENTR 931
Query: 841 --IQAPEGL---------RCLQ-----LMLSPKGLGTALVTVYDVGLAPPRAASALVQVA 884
+ P L RCL L +S G+G V D L A+V++
Sbjct: 932 ILVLTPLRLGHVRLELTDRCLMNEPSHLSISVVGIGAIEVVSMD-RLERTTRIEAIVRLF 990
Query: 885 DV-DWIKIMSGEEISLMYTYMDIRVHIEDHIVELIDDDATSSPDGGYFSMSSFKIMAKHL 943
D D + ++ ++S Y D+ + D + + + G + I +
Sbjct: 991 DTNDNLLLVDQSKLS---AY-DLSEVVADQSILSVRLGEQENVGPGEIR---YTITGNQV 1043
Query: 944 GITTLYVSARQQSGHEILSQPIRVEVYAPPRIHPHDIFLVPGASYMLTLKGGPTVGVYVD 1003
G T + + + +++ S P+ ++V+AP R+ P D LV G+S + GGP +
Sbjct: 1044 GETKILFQSGKGI-YKVASDPLNIQVFAPIRLFPRDSTLVVGSSIQVYFHGGPHPNTNMI 1102
Query: 1004 YTSTDEEIATIHRSSGQLFAISPGNTTLIAT-VFGN---G-DVVICQAFSSVKVGVPSSV 1058
+ E++ATI SS + A G T ++ + N G D V+ Q V V V
Sbjct: 1103 ISVEKEQVATI--SSTVVTAHKLGTTKIVGKCLLKNPVTGKDEVVSQDSVEVHVVALKGV 1160
Query: 1059 TLNAQSDQLAVGHEMP 1074
+ ++ G MP
Sbjct: 1161 QIRTPLVRIHSGAVMP 1176
Score = 94 (38.1 bits), Expect = 1.0e-06, Sum P(6) = 1.0e-06
Identities = 32/151 (21%), Positives = 72/151 (47%)
Query: 40 ELENSGAFSDLYVVKGIGIGHEMVSVHLLETEFMHMAD-SILLTVAEAMSIEPPSPVFVL 98
+ E G + +++GI G V++ + + E+ H+ + ++V + IEP S V ++
Sbjct: 187 KFEADGKKGHMILLEGINTGTAKVTIAMPQAEYKHVRPVEVYISVLANIIIEP-SEVTIM 245
Query: 99 VGAALQYKLKVIRGNIPQVVALPSPHHRWSVSNSSVAQVDNMMGLTQALRLGQTAVIVED 158
G ++ +++ ++ + ++ + + + V +SS+A + AL G+T V + D
Sbjct: 246 AGDSVSFRILQLK--MDRLHVIDNNQYYLEVEDSSIAYLRGNSATGAAL--GRTQVFLRD 301
Query: 159 TRVAGHTQVSS-----LNVVLPDTLWLYISP 184
+A +V L V P+ L + + P
Sbjct: 302 RNMADSDEVQKGPSALLTVAYPNRLSISLLP 332
Score = 65 (27.9 bits), Expect = 1.0e-06, Sum P(6) = 1.0e-06
Identities = 29/132 (21%), Positives = 58/132 (43%)
Query: 1311 ISYYDALGTPFHEAHNVILYHA---ETNYHDVVSINYTLNGSGKIYLKAKQHGRALVQVS 1367
+S +D LG +HN+ ++ E D V + N + + L + + ++ +S
Sbjct: 1375 VSLHDNLGNEL--SHNIEDFNGLRYELGNKDDVDVQIDNNLTFALNLMRETNN--VIGIS 1430
Query: 1368 MNRSP---QKSDYVLVSV--GAQLYPQNPVLHVGGSLDFSVEGFSDQVSGHWFSDNESVV 1422
+ S D++ +SV L+P + VG + F +S W S NE +V
Sbjct: 1431 LKDSTGVKHSMDFIKLSVVESDNLFPTKTIFSVGDIICFDSPL---TLSSTWRSSNEQIV 1487
Query: 1423 HVHMPSGKAEAV 1434
+++ +G A+ +
Sbjct: 1488 YINKHTGIAQVL 1499
Score = 55 (24.4 bits), Expect = 1.0e-06, Sum P(6) = 1.0e-06
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 320 ILLPWAPGIYQEVELM--ATGGCAKTSSDYKWFSSDMATVSITASG 363
++LP+ P + ++L A+GG ++Y WFS + + I G
Sbjct: 425 VVLPYDPNSLKPLKLQFHASGG----DNNYAWFSGNPQVIQIDTQG 466
Score = 41 (19.5 bits), Expect = 1.0e-06, Sum P(6) = 1.0e-06
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 360 TASGVVQAKKPGKATVKVVSIFDSFNYDEIVIEVS 394
++ ++ A P ++ I S +DE +++VS
Sbjct: 639 SSRNIIYANGPQRSFTVAAEIIQSTAFDEKILKVS 673
Score = 38 (18.4 bits), Expect = 0.00030, Sum P(6) = 0.00030
Identities = 24/122 (19%), Positives = 53/122 (43%)
Query: 1228 YSLLKFCSEKNEAASKDDISIDGDTIKTTS------SNHLACIQAKDRSSGRIEIASCVR 1281
+++ F + E +KDD+ + D T + +N++ I KD S+G + +
Sbjct: 1387 HNIEDFNGLRYELGNKDDVDVQIDNNLTFALNLMRETNNVIGISLKD-STG---VKHSMD 1442
Query: 1282 VAEVAQIRISNRYPLNVIHLAVGAEC-EIPISYYDALGTPFHEAHNVILY-HAETNYHDV 1339
+++ + N +P I C + P++ L + + ++ I+Y + T V
Sbjct: 1443 FIKLSVVESDNLFPTKTIFSVGDIICFDSPLT----LSSTWRSSNEQIVYINKHTGIAQV 1498
Query: 1340 VS 1341
+S
Sbjct: 1499 LS 1500
Score = 37 (18.1 bits), Expect = 1.0e-06, Sum P(6) = 1.0e-06
Identities = 11/47 (23%), Positives = 20/47 (42%)
Query: 614 YGVFCQTLGTFELVFKRGNLVGDDHPLPAVAEVSLSVTCSFPASIAL 660
+ V C+ LG + ++ N + +EV+ V C P + L
Sbjct: 686 FTVLCRELGETQFTYRVHNSLPTSSFALYQSEVTTKVHCVRPRFLKL 732
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.395 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1776 1734 0.00090 125 3 11 22 0.40 34
40 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 634 (67 KB)
Total size of DFA: 698 KB (2302 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 138.68u 0.11s 138.79t Elapsed: 00:00:07
Total cpu time: 138.70u 0.11s 138.81t Elapsed: 00:00:08
Start: Tue May 21 02:29:10 2013 End: Tue May 21 02:29:18 2013