Query 000266
Match_columns 1760
No_of_seqs 726 out of 4650
Neff 5.1
Searched_HMMs 29240
Date Tue Mar 26 16:00:28 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000266.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_46-50//hhsearch_pdb/000266hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ea0_A Glutamate synthase [NAD 1.0 1 1 3396.5 134.8 1463 115-1631 1-1466(1479)
2 1ofd_A Ferredoxin-dependent gl 1.0 1 1 3387.0 136.2 1455 115-1634 1-1506(1520)
3 3sr7_A Isopentenyl-diphosphate 1.0 1 1 272.6 20.1 275 982-1331 55-357 (365)
4 3sgz_A Hydroxyacid oxidase 2; 1.0 1 1 261.1 19.2 313 951-1327 4-347 (352)
5 2nzl_A Hydroxyacid oxidase 1; 1.0 1 1 259.6 18.6 324 950-1331 28-386 (392)
6 3vkj_A Isopentenyl-diphosphate 1.0 1 1 258.5 17.6 297 992-1351 38-363 (368)
7 1kbi_A Cytochrome B2, L-LCR; f 1.0 1 1 257.0 19.6 321 951-1327 124-478 (511)
8 2nli_A Lactate oxidase; flavoe 1.0 1 1 256.1 19.1 320 950-1329 14-361 (368)
9 1ecf_A Glutamine phosphoribosy 1.0 1 1 247.7 16.0 208 260-522 15-238 (504)
10 1ao0_A Glutamine phosphoribosy 1.0 1 1 239.7 18.0 182 284-520 29-221 (459)
No 1
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=1.00 E-value=1 Score=3396.46 Aligned_cols=1463 Identities=45% Similarity=0.762 Sum_probs=1391.0
Q ss_pred CEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECC
Q ss_conf 65899998479876074999999984154567778999999843241446958899999963988999995147767338
Q 000266 115 CGVGFVAELSGESSRKTITDALEMLVRMAHRGACGCETNTGDGAGILVALPHDFFKEAAKNVGFQLPPPGEYAVGMFFLP 194 (1760)
Q Consensus 115 CGVGfia~~~g~~sh~iv~~al~~L~~M~HRGa~g~d~~tGDGAGil~~iP~~ff~~~~~~~g~~lp~~g~yavG~~Flp 194 (1760)
||||||++++|++||+||++++++|+||+||||||||++||||||||+||||+||++.+.++|++||+ |+|+|||+|||
T Consensus 1 CGvg~va~~~G~~sh~~v~~al~aL~~m~HRG~~~ad~~tGDGaGil~~iP~~f~~~~~~~~g~~lp~-g~yavg~~Flp 79 (1479)
T 1ea0_A 1 CGVGFIAAIDGKPRRSVVEKGIEALKAVWHRGAVDADGKTGDGAGIHVAVPQKFFKDHVKVIGHRAPD-NKLAVGQVFLP 79 (1479)
T ss_dssp CEECEEEETTCCCBHHHHHHHHHHHTSCGGGSCCCTTSSCCSCBCEEEECCHHHHHHHHHHTTCCCCS-SCEEEEEEEEC
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCC-CCEEEEEEECC
T ss_conf 92899998379713799999999997334667667889998741562018799999999973988898-97189999858
Q ss_pred C-CHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCC-CCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 9-9879999999999999975988999786278999889752258990799999499-9892347888999999999999
Q 000266 195 Q-SENRREESKKVFTKVAESLGHTVLGWRAVPTDNSGLGNSALQTEPVVEQVFLTPS-LRSKVDFENQMYILRRVSMAAI 272 (1760)
Q Consensus 195 ~-d~~~~~~~~~~ie~~~~~~gl~vl~wR~VP~~~~~lG~~a~~~~P~i~Q~fv~~~-~~~~~~fer~Ly~lRk~~e~~i 272 (1760)
+ |+..+.+++++|+++++++||+|++||+||||+++||+.|++++|.|||+||.++ ..+..+|+|+||++|+.+|++.
T Consensus 80 ~~~~~~~~~~~~~~e~~~~~~g~~vlgwR~VPv~~~~lg~~a~~~~P~i~Q~fv~~~~~~~~~~~~r~ly~~r~~le~~~ 159 (1479)
T 1ea0_A 80 RISLDAQEACRCIVETEILAFGYYIYGWRQVPINVDIIGEKANATRPEIEQIIVGNNKGVSDEQFELDLYIIRRRIEKAV 159 (1479)
T ss_dssp SSCHHHHHHHHHHHHHHHHHTTCEEEEEEECCCCGGGSCHHHHHHCCEEEEEEEECTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHCCHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 86879999999999999998799899988489582103846774799359999977887663567898999999999865
Q ss_pred HHHHHHCCCCCCCEEEEEECCCEEEEECCCCHHCHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCC
Q ss_conf 98431015999838999956880899821151101001001479988651189985214579999989898741020045
Q 000266 273 RESLNLEHGGAKDFYICSLSSRTVVYKGQLKPIQMKDYYYADLGNERFTSYMALIHSRFSTNTFPSWDRAQPMRILGHNG 352 (1760)
Q Consensus 273 ~~~~~~~~~~~~~~yI~Sls~~tiVyKG~g~~~qv~~~y~~DL~d~~~~s~~ai~H~RySTNt~psw~~AQPfr~laHNG 352 (1760)
.. .. ..+|||||+|++++||||||+|.||++||+ ||+|++|+|++||+|+||||||+|+|.+||||++|||||
T Consensus 160 ~~-~~-----~~~~yi~Sls~~~~vyKGmgl~~~v~~~y~-dL~d~~~~g~~aigH~RySTnt~p~w~~AQPf~~laHNG 232 (1479)
T 1ea0_A 160 KG-EQ-----INDFYICSLSARSIIYKGMFLAEQLTTFYP-DLLDERFESDFAIYHQRYSTNTFPTWPLAQPFRMLAHNG 232 (1479)
T ss_dssp HH-HT-----CCSCEEEEEESSEEECCBSSCGGGHHHHCG-GGGSTTCCBSEEEEEECCCSCSCCCSTTSSCCSSEEEEE
T ss_pred HH-CC-----CCCEEEEEECCCEEEEECCCCHHHHHHHHH-HHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEECC
T ss_conf 43-45-----784899994693799934869899644555-525541360489864004678998745577617999777
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCC
Q ss_conf 55580667999997302111012488478885216955899996799999999999919999999987085331147889
Q 000266 353 EINTLRGNVNWMKAREGLLKCKELGLSKDEMKKLLPIVDVSSSDSGAFDGVLELLVRAGRSLPEAVMMMIPEAWQNDKNM 432 (1760)
Q Consensus 353 EInt~~gN~n~m~are~~~~s~~~g~~~~~l~~~~pi~~~~~SDSe~ld~~le~l~~~g~sl~eAi~~~iPeaw~~~~~m 432 (1760)
||||+++|||||+||+..++|+.|| +++++++|++++++||||+|||+||+|+++|+++++|++||+||||++++.|
T Consensus 233 eInn~~~nr~~m~are~~~~~~~~G---~~l~~~~pii~~~~SDSevld~~lelL~~~g~~l~~A~~~liPeaw~~~~~m 309 (1479)
T 1ea0_A 233 EINTVKGNVNWMKAHETRMEHPAFG---THMQDLKPVIGVGLSDSGSLDTVFEVMVRAGRTAPMVKMMLVPQALTSSQTT 309 (1479)
T ss_dssp CCTTHHHHHHHHHHHGGGCCCSTTG---GGHHHHCCSSCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHSCCCCC---CC
T ss_pred HHHCHHHHHHHHHHHHHHHCCCHHH---HHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHCCCCCC
T ss_conf 5438999999999867653173012---4588618868899983999999999998759999999998484122046557
Q ss_pred CHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEECCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCEEECCCCCCCC
Q ss_conf 98889999997711677998708994079569980698999774289984999999933654458998477716568992
Q 000266 433 DPQRKALYEYFSALMEPWDGPALISFTDGRYLGATLDRNGLRPGRFYITHSGRVIMASEVGVVDIPPEDVLRKGRLNPGM 512 (1760)
Q Consensus 433 ~~e~rafyey~~~~mepwdGPa~iv~tdg~~iga~lDrnGLRPlr~~~t~d~~~i~ASE~gaidi~~~~v~~kg~l~PGe 512 (1760)
++++|+||+|++++||||||||+++|+||+.++|+||||||||+||..++|+.|++|||+|++|+.++++++||||+|||
T Consensus 310 ~~~~~~fye~~~~~me~~dGp~slv~~dg~~l~a~~DrnGlRPl~~g~t~d~~~v~ASE~galdi~~a~~vrkg~l~PGe 389 (1479)
T 1ea0_A 310 PDNHKALIQYCNSVMEPWDGPAALAMTDGRWVVGGMDRNGLRPMRYTITTDGLIIGGSETGMVKIDETQVIEKGRLGPGE 389 (1479)
T ss_dssp CHHHHHHHHHHHHHCCCCCSSEEEEECSSSEEEEECCTTCCSCCEEEEETTSEEEECSSSTTSCCCGGGEEEEEECCTTC
T ss_pred CHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEECCCCCCCEEEEEECCCEEEEECCCCCCCCCCHHEEECCCCCCCE
T ss_conf 88899999999986304777679999859999998568888623899977987999735200157623334525789984
Q ss_pred EEEEECCCCEEECHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 99998499778042889999881299077875115323330000012467788755768999999864100110405779
Q 000266 513 MLLVDFEKRIVVDDEALKQQYSLARPYGEWLQRQKIELKNIVESIHKSERVSPGIAGVLPASNDDDNMENMGIHGLLAPL 592 (1760)
Q Consensus 513 mi~vd~~~g~i~~~~e~k~~~a~~~py~~wl~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 592 (1760)
|++||+++|+|++|+|||+++++++||++|| ++++.|++++....... ....+ .+ ..+.++|
T Consensus 390 mv~id~~~g~i~~~~eik~~~~~~~py~~wl-~~~~~l~~~~~~~~~~~-~~~~~----------~~------~~~~~~~ 451 (1479)
T 1ea0_A 390 MIAVDLQSGKLYRDRELKDHLATLKPWDKWV-QNTTHLDELVKTASLKG-EPSDM----------DK------AELRRRQ 451 (1479)
T ss_dssp EEEEETTTTEEECHHHHHHHHHHTTTHHHHH-TTCBCTTHHHHHHHHTT-CCCCC----------CT------HHHHHHH
T ss_pred EEEEECCCCEEECCHHHHHHHHHHCCCHHHH-HCCEEHHHCCCCCCCCC-CCCCC----------CH------HHHHHHH
T ss_conf 8999888990716599999998609915677-34101743665433344-56678----------87------8899999
Q ss_pred HHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCC
Q ss_conf 97499999999869889820352224567787764445675302688855043334999996432210553462049998
Q 000266 593 KAFGYTVEALEMLMLPMAKDGTEALGSMGNDAPLAVMSNREKLTFEYFKQMFAQVTNPPIDPIREKIVTSMECMIGPEGV 672 (1760)
Q Consensus 593 ~~fgyt~e~~~~~l~pMa~~g~E~igSMG~D~PLA~ls~~p~~l~dYFkQ~FAQVTNPPIDpiRE~~vmSl~~~lG~~~n 672 (1760)
++||||.||++++|.|||++|+||+|||||||||||||++||+|||||||+||||||||||||||++||||+|+|||++|
T Consensus 452 ~~fgyt~e~~~~~l~pma~~g~e~~gsMG~D~pla~ls~~~~~l~~yFkq~fAqVTNPpiD~iRE~~v~sl~~~~G~~~n 531 (1479)
T 1ea0_A 452 QAFGLTMEDMELILHPMVEDGKEAIGSMGDDSPIAVLSDKYRGLHHFFRQNFSQVTNPPIDSLRERRVMSLKTRLGNLGN 531 (1479)
T ss_dssp HTTTCCHHHHHTTTHHHHHHSSCCEECSCCCSCCGGGCSSCCCGGGTEEECCCCSSSCCCCTTTTGGGCCCCEEESCCSC
T ss_pred HHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCEEECCCCCCCCCC
T ss_conf 99789999999999999963996705588883536646797626788988753236898640121100201222268765
Q ss_pred CCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC
Q ss_conf 89899676461795377349999999996047997048999885079791239999999999999999859929998089
Q 000266 673 LTETTEEQCHRLSLKGPLLSIEEMEAIKRMNYRGWRSKVLDITYSKDHGRRGLEETLDRICAEARDAIKEGYTLLVLSDR 752 (1760)
Q Consensus 673 ~l~~~~~~~~rl~L~sPIL~~~el~~lk~~~~~~~~~~~id~tf~~~~g~~gL~~aL~~l~~eA~~Av~~G~~iiVLSDr 752 (1760)
+|++++++|++|+|+||||++.||++|+++ +.|++++||++|++.+|.++|++||++||++|++||++|++|||||||
T Consensus 532 ~l~~~~~~~~~~~l~~Pil~~~~~~~l~~~--~~~~~~~~~~~~~~~~g~~~l~~al~~l~~~a~~av~~g~~iliLsDr 609 (1479)
T 1ea0_A 532 ILDEDETQTRLLQLESPVLTTAEFRAMRDY--MGDTAAEIDATFPVDGGPEALRDALRRIRQETEDAVRGGATHVILTDE 609 (1479)
T ss_dssp TTCCSGGGSCSEEESCSBCCHHHHHHHHHH--HGGGEEEEECEEESTTCTTHHHHHHHHHHHHHHHHHHHTCCEEEEECT
T ss_pred CCCCCCCCCCEEEECCCCCCHHHHHHHHCC--CCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf 688975678879968972798999998656--898428997898777780579999999999999999879929997899
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 98899864329998899999999739777101999509878678999998408000027999999999997499999999
Q 000266 753 AFSSKRVAVSSLLAVGAVHHHLVKNLERTRIGLIVESAEPREVHHFCTLVGFGADAICPYLATEAIWRLQVDGKIPPKAS 832 (1760)
Q Consensus 753 ~~~~~~~~ip~lLAvgaVh~~Li~~glR~~vsLIvesge~RevHh~a~LlGyGAdAV~PYla~e~i~~~~~~g~~~~~~~ 832 (1760)
.++++++|||+|||||||||||+++++|+++||||||||+|||||||+|+||||+|||||||||++.+|.++|++
T Consensus 610 ~~~~~~~~ip~lla~~avh~~L~~~~~R~~~~lvvesg~~r~~Hh~a~l~GyGA~av~Pyla~e~~~~~~~~~~~----- 684 (1479)
T 1ea0_A 610 AMGPARAAIPAILATGAVHTHLIRSNLRTFTSLNVRTAEGLDTHYFAVLIGVGATTVNAYLAQEAIAERHRRGLF----- 684 (1479)
T ss_dssp TCBTTEEECCHHHHHHHHHHHHHTTTCGGGCEEEEECSSCCSHHHHHHHHTTTCSEEECHHHHHHHHHHHTTTTT-----
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC-----
T ss_conf 989796680889999999999986586330108997077112889999873570434879999999999976998-----
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 99899999999999999999999998516233401333410220399978994116999777678896899999999999
Q 000266 833 GEFHSKDELVKKYFKASNYGMMKVLAKMGISTLASYKGAQIFEALGLSSEVIEKCFAGTPSRVDGATFEVLASDALHLHE 912 (1760)
Q Consensus 833 ~~~~~~~~~~~ny~~Ai~~GilKVMSKMGISTl~SY~GAQiFea~GL~~~vv~~~F~gt~sri~G~~~~~i~~~~~~~h~ 912 (1760)
. +++.+++++||+||++|||+|||||||||||+||+||||||||||+++|||+||+||+|||+|++|++|++|++.||+
T Consensus 685 ~-~~~~~~~~~ny~~a~~~Gl~KimskmGIst~~sY~gaqiFeavGl~~~~v~~~F~gt~s~i~G~~~~~i~~~~~~~h~ 763 (1479)
T 1ea0_A 685 G-SMPLEKGMANYKKAIDDGLLKIMSKMGISVISSYRGGGNFEAIGLSRALVAEHFPAMVSRISGIGLNGIQKKVLEQHA 763 (1479)
T ss_dssp T-TCCHHHHHHHHHHHHHHHHHHHHHTTTCCCHHHHTTSCCEEESSBCHHHHHHHSSSCCCSSCCBCHHHHHHHHHHHHH
T ss_pred C-CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 8-999999999999999977899970204766630577313320379879999856999756678799999999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 70899999999966867999973000248976556989999999999139989999999997600267543343344567
Q 000266 913 LAFPTRILPPGSAEAVALPNPGDYHWRKGGEIHLNDPLAIAKLQEAARGNSVAAYKEYSKRIQELNKTCNLRGLLKFKEA 992 (1760)
Q Consensus 913 ~a~~~~~~~~~~~~~~~l~~~g~y~~r~~ge~H~~~p~~i~~lq~a~~~~~~~~~~~y~~~~~~~~~~~~~r~ll~~~~~ 992 (1760)
.||+.+ ...|+.+|+||||++||+|.|+|++|+.||+++++++|+.|+.|....++ .++.++|+++.|+.+
T Consensus 764 ~a~~~~--------~~~l~~~g~~~~r~~ge~h~~~p~~i~~l~~~~~~g~~~~~~~~~~~~~~-~~~~~~~dl~~~~~~ 834 (1479)
T 1ea0_A 764 TAYNEE--------VVALPVGGFYRFRKSGDRHGWEGGVIHTLQQAVTNDSYTTFKKYSEQVNK-RPPMQLRDLLELRST 834 (1479)
T ss_dssp HHHSSC--------CSSCCCCCSSSCCSSSSCCSSCHHHHHHHHHHHHHTCHHHHHHHHHHHHT-SCCCSGGGGEEECCS
T ss_pred HHCCCC--------CCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC-CCCCCHHHHHHCCCC
T ss_conf 865864--------56688897644378997668898999999999872898899999963266-898743012103678
Q ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHEEECCC
Q ss_conf 89999888777333346447457984347499999999999970996321699999236576789998413431232144
Q 000266 993 DVKIPLEEVEPASEIVKRFCTGAMSYGSISLEAHTTLATAMNKIGGKSNTGEGGEQPSRMEPLSDGSMNPKRSAIKQVAS 1072 (1760)
Q Consensus 993 ~~~i~~~~Ve~~t~i~~Pf~isaMS~Gsls~ea~~aLA~Aa~~~G~~s~sGeGg~~~e~~~~~~~g~~~~~~s~IkQvas 1072 (1760)
.+++++++|+++++|..||+|+|||||++|+++|++||+||+++|+++++|||+++++++.+..++ +...+.|+|+++
T Consensus 835 l~~i~~~ev~~~~~I~~Pf~isaMS~GalS~ea~~aLA~Aa~~aGg~~~tGeGg~~pe~~~~~~~g--~~~~~~IrQ~as 912 (1479)
T 1ea0_A 835 KAPVPVDEVESITAIRKRFITPGMSMGALSPEAHGTLNVAMNRIGAKSDSGEGGEDPARFRPDKNG--DNWNSAIKQVAS 912 (1479)
T ss_dssp SCCCCGGGSCCHHHHHTTEEEEECCBTTBCHHHHHHHHHHHHHTTCEEECCTTCCCGGGSSBCTTS--CBCCCSEEEECS
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHCCCC--CHHHHHHHHHCC
T ss_conf 899883112430121477684474665257999999999999809904727886699886211266--126555655358
Q ss_pred CCCCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 88677956434712677766305788988987875421899988089886333389999999999989999999997399
Q 000266 1073 GRFGVSSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDIAVTRNSTAGVGLISPPPHHDIYSIEDLAQLIYDLKNANP 1152 (1760)
Q Consensus 1073 grFGvt~~~L~~a~~ieIKiaQGAKpG~GG~Lpg~kv~~~IA~~r~~~~G~~lisP~~h~diySiEdL~qlI~~Lr~~~p 1152 (1760)
++|||+.+++.+++++|||++||||||+||++|+.|++++||++|++++|++++||++|||||+++++.++|++||+.+|
T Consensus 913 g~FGVn~~~l~~a~~ieIKigQGAKpG~GG~Lp~~kv~~~IA~~R~~~~Gv~lisP~~~~d~~s~edl~~~I~~Lk~~~~ 992 (1479)
T 1ea0_A 913 GRFGVTAEYLNQCRELEIKVAQGAKPGEGGQLPGFKVTEMIARLRHSTPGVMLISPPPHHDIYSIEDLAQLIYDLKQINP 992 (1479)
T ss_dssp SCTTCCHHHHTSCSEEEEECCCTTSTTTCCEECGGGCCHHHHHHHTCCTTCCEECCSSCTTCSSHHHHHHHHHHHHHHCT
T ss_pred CCCCCCHHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 98874867714534578887526887767887899999999997189999886488877676897999999999987278
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC
Q ss_conf 99268998113688999999998499799992399998998522212468888999999999988479998409998698
Q 000266 1153 GARISVKLVSEAGVGVIASGVVKGHADHVLISGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTILQTDGQ 1232 (1760)
Q Consensus 1153 ~~pI~VKlv~~~Gig~vA~~aakaGAD~IvIsG~~GGTGaa~~~si~~~GlP~~~~L~ev~q~L~~~glr~rV~IiadGG 1232 (1760)
++||+||+++..|++++|..++++|||+|+|||++|||++++..+++++|+||+.+|+++++++.++++|++|+||+|||
T Consensus 993 ~~PV~VKlv~~~gi~~~A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt~~aL~ev~~al~~~glr~~VpVIAdGG 1072 (1479)
T 1ea0_A 993 DAKVTVKLVSRSGIGTIAAGVAKANADIILISGNSGGTGASPQTSIKFAGLPWEMGLSEVHQVLTLNRLRHRVRLRTDGG 1072 (1479)
T ss_dssp TCEEEEEEECCTTHHHHHHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCCHHHHHHHHHHHHHTTTCTTTSEEEEESS
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
T ss_conf 99779997688986999999998699699983879987887625414873659999999999998718888826999799
Q ss_pred CCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 67999999999919981123516799830100113435989873221393567420898999999999999999999995
Q 000266 1233 LKTGRDVAIAALLGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFMLAEELREIMSQ 1312 (1760)
Q Consensus 1233 IrtG~DV~KALaLGAdaVgiGta~L~algc~~~r~c~~~~cp~giatqdp~lr~~~~g~~e~V~n~l~~l~~ELr~~Ma~ 1312 (1760)
|+||.||+||++|||++|++||++|+++||.|||+||+|+||+|||||||.|+++|.+++++|.||+..+.+||+++|+.
T Consensus 1073 IrtG~DVakALaLGAdaV~iGTafL~a~gc~~~r~Ch~~~CP~Gvatqdp~l~~~~~gg~e~V~n~l~~l~~ELr~~Ma~ 1152 (1479)
T 1ea0_A 1073 LKTGRDIVIAAMLGAEEFGIGTASLIAMGCIMVRQCHSNTCPVGVCVQDDKLRQKFVGTPEKVVNLFTFLAEEVREILAG 1152 (1479)
T ss_dssp CCSHHHHHHHHHTTCSEEECCHHHHHHHTCCCCCCTTTTCCTTSSSCCCTTGGGSCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88899999999839882148199999888789865459989830277678888544773689999999999999999998
Q ss_pred CCCCCHHHHCCCCCEEECCC-CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 29988333208974132130-00133010138997234576557898755311023679876367799999999999709
Q 000266 1313 LGFRTITEMIGRSDMLEVDK-EVTKTNEKLENIDLSLLLRPAADLRPEAAQYCVQKQDHGLDMALDQKLIKLSKAALEKA 1391 (1760)
Q Consensus 1313 lG~~si~elvgr~dll~~~~-~~~~~~~~~~~~dls~~l~~~~~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~~~~~~~~ 1391 (1760)
+|+++++||+++++++...+ .. .|+++||||+||.++.. .++ +.+|+.+|+|.++..||++++++++++|+++
T Consensus 1153 lG~~si~eL~g~~~ll~~~~~~~----~k~~~ldls~~l~~~~~-~~~-~~~~~~~~~~~~~~~ld~~l~~~~~~a~~~~ 1226 (1479)
T 1ea0_A 1153 LGFRSLNEVIGRTDLLHQVSRGA----EHLDDLDLNPRLAQVDP-GEN-ARYCTLQGRNEVPDTLDARIVADARPLFEEG 1226 (1479)
T ss_dssp HTCSCSGGGTTCGGGEEEC------------CCCCHHHHCCSSC-C----------CCCCCCCCTHHHHHHHTHHHHHHC
T ss_pred HCCCCHHHHHCCHHEEECCCCCC----HHCCCCCHHHHCCCCCC-CCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 38999999837244100242210----01038896896188777-888-7512456776532378999999999998659
Q ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHCCCCCCEEEEEECCCCHHHCCCCCCEEE
Q ss_conf 96899831015676110235689987612389997229999946742022102889968999914776120089996699
Q 000266 1392 LPVYIETPVCNVNRAVGTMLSHEVTKRYHLVGLPADTIHIKLTGSAGQSVGAFLCPGILLELEGDSNDYVGKGLSGGKIV 1471 (1760)
Q Consensus 1392 ~~~~~~~~i~n~dR~vG~~ls~~i~~~~g~~gl~~~~i~i~~~G~aGq~~Gaf~~~G~~i~v~G~a~dyvGkgmsGG~Iv 1471 (1760)
.++.++++|.|+||+|||+|||+|+|+||..||+.++|+|+++|++||+||+||.+|++|+|+|||||||||+|+||+|+
T Consensus 1227 ~~~~~~~~i~n~~R~vG~~ls~~i~~~~g~~gl~~~~i~i~i~G~aGq~~Ga~m~~G~~i~v~G~A~dyvGk~m~GG~Iv 1306 (1479)
T 1ea0_A 1227 EKMQLAYNARNTQRAIGTRLSSMVTRKFGMFGLQPGHITIRLRGTAGQSLGAFAVQGIKLEVMGDANDYVGKGLSGGTIV 1306 (1479)
T ss_dssp CCEEEEEEECTTCCSTTHHHHHHHHHHTTTTSSCTTSEEEEEEEEECSSTTTTCBTTEEEEEEEEECSCTTTTCEEEEEE
T ss_pred CCEEEEECEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHCCCCCCCEEEEEEECCHHHCCCCCCCEEE
T ss_conf 96799935110444464677899999855178987856999968735776310899988999971762424887298899
Q ss_pred EECCCCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCC
Q ss_conf 93999999999865201036530375427999356654200015885999927776201235584799938878764589
Q 000266 1472 AYPPKGSLFDPKVNIVIGNVALYGATSGEAYFNGMAAERFCVRNSGARAVVEGVGDHGCEYMTGGTVVVLGKTGRNFAAG 1551 (1760)
Q Consensus 1472 V~g~~~~~f~~~~~~i~Gn~~~yGatgG~i~v~G~aG~r~gvr~sG~~~VV~G~Gd~~~eyMtgG~ivVlG~~G~~~gag 1551 (1760)
|+||+++.|.+++|+|+||+|+|||+||++||+|+||+|||+||||+++||+|+|||+|||||||+|||||++|+|||+|
T Consensus 1307 V~g~~~~~~~~~~~~~~Gn~~~~gm~gG~i~v~G~AG~R~gvr~sG~~iVV~G~Gd~~~eyMtGG~ivVlG~~G~~~gag 1386 (1479)
T 1ea0_A 1307 VRPTTSSPLETNKNTIIGNTVLYGATAGKLFAAGQAGERFAVRNSGATVVVEGCGSNGCEYMTGGTAVILGRVGDNFAAG 1386 (1479)
T ss_dssp EECCTTCCCCGGGSEEECSSTTTTCCEEEEEESSEECTTTTTTCEEEEEEESCBCSSTTTTCCEEEECCSSCBCSSBTTT
T ss_pred EECCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEHHHHHHHHCCCCEEEECCCCCCEEEECCCCEEEEECCCCCCCCCC
T ss_conf 98996454554357400178885366868999762054332641687899657741135422687899957888775578
Q ss_pred CCCEEEEEECCCCHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCHHHHH
Q ss_conf 74529999757731100259562323118988899999999999999827199999986132117994999230169999
Q 000266 1552 MSGGIAYVLDVDGKFRSRCNPELVDLDKVEEEEDIITLRMMIQQHQRYTNSQLAKEVLADFENLLPKFIKVFPRDYKRVL 1631 (1760)
Q Consensus 1552 M~gG~iyv~~~~~~~~~~~n~~~V~l~~~~~~~d~~~l~~ll~~h~~~t~s~~a~~iL~~~~~~~~~F~kv~P~~y~~~l 1631 (1760)
|+||+|||+|++++|..+||.+||++....+++|+++|+.||++|+++|+|++|+.||+||++++.+|+||+|++|+++|
T Consensus 1387 M~GG~iyv~~~~~~f~~~~n~e~V~~~~~~~~~d~~~L~~ll~~h~~~tgs~~a~~iL~~~~~~~~~F~kv~P~~~~~~~ 1466 (1479)
T 1ea0_A 1387 MTGGMAYVYDLDDSLPLYINDESVIFQRIEVGHYESQLKHLIEEHVTETQSRFAAEILNDWAREVTKFWQVVPKEMLNRL 1466 (1479)
T ss_dssp CCSSEECCCCTTSCHHHHBCGGGEEEECCCSTTHHHHHHHHHHHHHHHHCCHHHHHHHHTHHHHHTTCCEEEEGGGGGGC
T ss_pred CCCEEEEEECCCCCHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEECHHHHHHH
T ss_conf 62749999678887455268867211245777789999999999999979888999997289874385999642057774
No 2
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=1.00 E-value=1 Score=3387.02 Aligned_cols=1455 Identities=46% Similarity=0.789 Sum_probs=1387.1
Q ss_pred CEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECC
Q ss_conf 65899998479876074999999984154567778999999843241446958899999963988999995147767338
Q 000266 115 CGVGFVAELSGESSRKTITDALEMLVRMAHRGACGCETNTGDGAGILVALPHDFFKEAAKNVGFQLPPPGEYAVGMFFLP 194 (1760)
Q Consensus 115 CGVGfia~~~g~~sh~iv~~al~~L~~M~HRGa~g~d~~tGDGAGil~~iP~~ff~~~~~~~g~~lp~~g~yavG~~Flp 194 (1760)
||||||++++|++||+||++++++|+||+||||||||++||||||||+||||+||++....+|++||+.|+|||||+|||
T Consensus 1 CGvg~va~~~G~~sh~iv~~al~~L~~m~HRG~~~ad~~tGDGaGil~~iP~~f~~~~~~~~g~~l~~~g~yavg~~Flp 80 (1520)
T 1ofd_A 1 CGVGFIANLRGKPDHTLVEQALKALGCMEHRGGCSADNDSGDGAGVMTAIPRELLAQWFNTRNLPMPDGDRLGVGMVFLP 80 (1520)
T ss_dssp CEEEEEECSSSCCBSHHHHHHHHHHHHTGGGSCBCTTSSSBSCEEEEEECCHHHHHHHHHHTTCCCCCGGGCEEEEEEEC
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECC
T ss_conf 92899998079731899999999997323567566789997743562118899999999974989897787079999558
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99879999999999999975988999786278999889752258990799999499-98923478889999999999999
Q 000266 195 QSENRREESKKVFTKVAESLGHTVLGWRAVPTDNSGLGNSALQTEPVVEQVFLTPS-LRSKVDFENQMYILRRVSMAAIR 273 (1760)
Q Consensus 195 ~d~~~~~~~~~~ie~~~~~~gl~vl~wR~VP~~~~~lG~~a~~~~P~i~Q~fv~~~-~~~~~~fer~Ly~lRk~~e~~i~ 273 (1760)
+|+..+++++++|+++++++||+|++||+||||+++||+.|++++|.|||+||.++ ..+..+|+|+||++|+++ +
T Consensus 81 ~d~~~~~~~~~~~e~~~~~~g~~vlgwR~VPv~~~~lg~~a~~~~P~i~Q~fv~~~~~~~~~~~~r~ly~~r~~l----e 156 (1520)
T 1ofd_A 81 QEPSAREVARAYVEEVVRLEKLTVLGWREVPVNSDVLGIQAKNNQPHIEQILVTCPEGCAGDELDRRLYIARSII----G 156 (1520)
T ss_dssp SSHHHHHHHHHHHHHHHHHTTCEEEEEEECCBCGGGSCHHHHHHCCEEEEEEEECTTCCCHHHHHHHHHHHHHHH----G
T ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH----H
T ss_conf 998999999999999999779989998718988200376788489946999997888766336788899999999----8
Q ss_pred HHHHHCCCCCCCEEEEEECCCEEEEECCCCHHCHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCC
Q ss_conf 84310159998389999568808998211511010010014799886511899852145799999898987410200455
Q 000266 274 ESLNLEHGGAKDFYICSLSSRTVVYKGQLKPIQMKDYYYADLGNERFTSYMALIHSRFSTNTFPSWDRAQPMRILGHNGE 353 (1760)
Q Consensus 274 ~~~~~~~~~~~~~yI~Sls~~tiVyKG~g~~~qv~~~y~~DL~d~~~~s~~ai~H~RySTNt~psw~~AQPfr~laHNGE 353 (1760)
++.. ++|||||+|++++||||||+|.||++||+ ||+|++|+|++||+|+||||||+|+|.+||||++||||||
T Consensus 157 ~~~~------~~~yI~S~s~~~~vyKgmgl~~~v~~~y~-dL~~~~~~g~~aigH~RySTnt~p~w~~AQPf~~LaHNGe 229 (1520)
T 1ofd_A 157 KKLA------EDFYVCSFSCRTIVYKGMVRSIILGEFYL-DLKNPGYTSNFAVYHRRFSTNTMPKWPLAQPMRLLGHNGE 229 (1520)
T ss_dssp GGCB------TTBEEEEEESSEEEEEESSCHHHHHHHBH-HHHCTTCCBSEEEEEECCCSSSCCCGGGSSCCSSEEEEEC
T ss_pred HHCC------CCEEEEEECCCEEEEECCCCHHHHHHHHH-HCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHEEEECCH
T ss_conf 6333------87899980684799947763899865400-0035444504899871146799987455776010376655
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCC-CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCC
Q ss_conf 55806679999973021110124-88478885216955899996799999999999919999999987085331147889
Q 000266 354 INTLRGNVNWMKAREGLLKCKEL-GLSKDEMKKLLPIVDVSSSDSGAFDGVLELLVRAGRSLPEAVMMMIPEAWQNDKNM 432 (1760)
Q Consensus 354 Int~~gN~n~m~are~~~~s~~~-g~~~~~l~~~~pi~~~~~SDSe~ld~~le~l~~~g~sl~eAi~~~iPeaw~~~~~m 432 (1760)
|||+++|||||+||+..|+|+.| | +++++++|++++++||||+|||+||+|+++|++|++|++||+||||++++.|
T Consensus 230 Int~~~nrnwm~aR~~~~~s~~~~g---~~l~~~~p~i~~~~SDSe~ld~~lelL~~~g~~l~~A~~~liPeaw~~~~~m 306 (1520)
T 1ofd_A 230 INTLLGNINWMAAREKELEVSGWTK---AELEALTPIVNQANSDSYNLDSALELLVRTGRSPLEAAMILVPEAYKNQPAL 306 (1520)
T ss_dssp CTTHHHHHHHHHHHGGGCCCTTCCH---HHHHHHCCSCCTTSCHHHHHHHHHHHHHHTTCCHHHHHHHHSCCCCTTCGGG
T ss_pred HHCHHHHHHHHHHHHHHHCCCCCCH---HHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHCCCCCC
T ss_conf 4457778889998788741755462---6688608858899984999999999998649999999998485111045445
Q ss_pred C--HHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEECCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCEEECCCCCC
Q ss_conf 9--88899999977116779987089940795699806989997742899849999999336544589984777165689
Q 000266 433 D--PQRKALYEYFSALMEPWDGPALISFTDGRYLGATLDRNGLRPGRFYITHSGRVIMASEVGVVDIPPEDVLRKGRLNP 510 (1760)
Q Consensus 433 ~--~e~rafyey~~~~mepwdGPa~iv~tdg~~iga~lDrnGLRPlr~~~t~d~~~i~ASE~gaidi~~~~v~~kg~l~P 510 (1760)
+ +++|+||+|++++||||||||+++|+||+.++|+||||||||+||+.|+|+.|++|||+|++|++++++++||||+|
T Consensus 307 ~~~~~~~~fyey~~~~me~~dGpaalv~~dg~~l~a~~DrnGlRPl~~~~t~d~~~v~ASE~galdi~~a~~vrkg~l~P 386 (1520)
T 1ofd_A 307 KDYPEISDFHDYYSGLQEPWDGPALLVFSDGKIVGAGLDRNGLRPARYCITKDDYIVLGSEAGVVDLPEVDIVEKGRLAP 386 (1520)
T ss_dssp TTCHHHHHHHHHHTTTCCCCCSSEEEEEECSSEEEEEECTTCCSCCEEEEETTCCEEEESSTTCSCCCGGGEEEEEECCT
T ss_pred CCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEECCCCCCCEEEEEECCCEEEEECCCCCCCCCCHHEEECCCCCC
T ss_conf 63077899999999760257787799998599999996688887337999679879997263200476233344157899
Q ss_pred CCEEEEECCCCEEECHHHHHHHHHHCCCCHHHHHHCCCCC--CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9299998499778042889999881299077875115323--33000001246778875576899999986410011040
Q 000266 511 GMMLLVDFEKRIVVDDEALKQQYSLARPYGEWLQRQKIEL--KNIVESIHKSERVSPGIAGVLPASNDDDNMENMGIHGL 588 (1760)
Q Consensus 511 Gemi~vd~~~g~i~~~~e~k~~~a~~~py~~wl~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 588 (1760)
|||++||+++|+|++|+|||+++++++||++||+++++.| ++++.. . .+ . .+ ..+
T Consensus 387 Gemv~id~~~g~i~~~~eik~~~a~~~py~~wl~~~~~~l~~~~~~~~-~-------~~----~-----~~------~~~ 443 (1520)
T 1ofd_A 387 GQMIAVDLAEQKILKNYQIKQQAAQKYPYGEWIKIQRQTVASDSFAEK-T-------LF----N-----DA------QTV 443 (1520)
T ss_dssp TCEEEEETTTTEEECHHHHHHHHHTTSCHHHHHHHHEEEECCSCCCCS-C-------SC----S-----CH------HHH
T ss_pred CEEEEEECCCCEEECHHHHHHHHHHCCCHHHHHHHHCEECCCCCCCCC-C-------CC----C-----CH------HHH
T ss_conf 717999888992706099999998619878888621233463224555-5-------56----6-----35------779
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEC
Q ss_conf 57799749999999986988982035222456778776444567530268885504333499999643221055346204
Q 000266 589 LAPLKAFGYTVEALEMLMLPMAKDGTEALGSMGNDAPLAVMSNREKLTFEYFKQMFAQVTNPPIDPIREKIVTSMECMIG 668 (1760)
Q Consensus 589 ~~~~~~fgyt~e~~~~~l~pMa~~g~E~igSMG~D~PLA~ls~~p~~l~dYFkQ~FAQVTNPPIDpiRE~~vmSl~~~lG 668 (1760)
.++|++||||.||++++|.|||++|+||+|||||||||||||++||+|||||||+||||||||||||||++||||+|+||
T Consensus 444 ~~~q~~fgyt~e~~~~~l~pma~~g~e~~gsMG~D~plavls~~~~~l~~yFkQ~fAqVTNPpiD~iRE~~v~Sl~~~~G 523 (1520)
T 1ofd_A 444 LQQQAAFGYTAEDVEMVVVPMASQGKEPTFCMGDDTPLAVLSHKPRLLYDYFKQRFAQVTNPPIDPLRENLVMSLAMFLG 523 (1520)
T ss_dssp HHHHHHTTCCHHHHHHTHHHHHHHSSCCEECSCCCSCCTTTCSSCCCGGGGEEECCCCSSSCCCCTTTTGGGCBCCEEES
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHEEECCCCCC
T ss_conf 99999968999999999999986389670658899553664589863789998864202688863033331000022016
Q ss_pred CCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 99988989967646179537734999999999604799704899988507979123999999999999999985992999
Q 000266 669 PEGVLTETTEEQCHRLSLKGPLLSIEEMEAIKRMNYRGWRSKVLDITYSKDHGRRGLEETLDRICAEARDAIKEGYTLLV 748 (1760)
Q Consensus 669 ~~~n~l~~~~~~~~rl~L~sPIL~~~el~~lk~~~~~~~~~~~id~tf~~~~g~~gL~~aL~~l~~eA~~Av~~G~~iiV 748 (1760)
|++|+|++++++|++|+|+||||++.||++|++ +.|++++||++|++. |.++|++||++||++|++||++|++|||
T Consensus 524 ~~~n~l~~~~~~~~~~~l~~Pil~~~~~~~~~~---~~~~~~~~~~~~~~~-g~~~l~~al~~l~~~a~~av~~g~~ili 599 (1520)
T 1ofd_A 524 KRGNLLEPKAESARTIKLRSPLVNEVELQAIKT---GQLQVAEVSTLYDLD-GVNSLEDALTNLVKTAIATVQAGAEILV 599 (1520)
T ss_dssp CCCCSSSCCGGGGCEEEESCSBCCHHHHHHHHH---SSSCEEEEECEEECS-SSCCHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred CCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHC---CCCCEEEEEEEEECC-CHHHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 888778898678887986897068899999841---798439998898577-3368999999999999999987991999
Q ss_pred ECCCC----CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHH---
Q ss_conf 80899----88998643299988999999997397771019995098786789999984080000279999999999---
Q 000266 749 LSDRA----FSSKRVAVSSLLAVGAVHHHLVKNLERTRIGLIVESAEPREVHHFCTLVGFGADAICPYLATEAIWRL--- 821 (1760)
Q Consensus 749 LSDr~----~~~~~~~ip~lLAvgaVh~~Li~~glR~~vsLIvesge~RevHh~a~LlGyGAdAV~PYla~e~i~~~--- 821 (1760)
||||. ++++++|||+|||||||||||+++++|+++||||||||+||+||||+|+||||+|||||||||++.+|
T Consensus 600 LsDr~~~~~~~~~~~~ip~lla~~avh~~Li~~~~R~~~~lvvesg~~r~~Hh~a~l~GyGA~av~Pyla~e~~~~~~~~ 679 (1520)
T 1ofd_A 600 LTDRPNGAILTENQSFIPPLLAVGAVHHHLIRAGLRLKASLIVDTAQCWSTHHFACLVGYGASAICPYLALESVRQWWLD 679 (1520)
T ss_dssp EESSGGGCCCCTTEEECCHHHHHHHHHHHHHHTTCGGGCEEEEECSSCCSHHHHHHHHHTTCSEEECHHHHHHHHHHHSC
T ss_pred ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHC
T ss_conf 85899867879885680889999999999986587330108997277472999999987656131689999999998746
Q ss_pred ------HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHCCCCHHHHHHHCCCCCCCC
Q ss_conf ------97499999999998999999999999999999999985162334013334102203999789941169997776
Q 000266 822 ------QVDGKIPPKASGEFHSKDELVKKYFKASNYGMMKVLAKMGISTLASYKGAQIFEALGLSSEVIEKCFAGTPSRV 895 (1760)
Q Consensus 822 ------~~~g~~~~~~~~~~~~~~~~~~ny~~Ai~~GilKVMSKMGISTl~SY~GAQiFea~GL~~~vv~~~F~gt~sri 895 (1760)
.++|++ + .++.+++++||+||++|||+|||||||||||+||+||||||||||+++|||+||+||+|||
T Consensus 680 ~~~~~~~~~~~~-----~-~~~~~~~~~ny~~a~~~Gl~KimskmGIst~~sY~gaqiFeavGl~~~~v~~~F~gt~s~i 753 (1520)
T 1ofd_A 680 EKTQKLMENGRL-----D-RIDLPTALKNYRQSVEAGLFKILSKMGISLLASYHGAQIFEAIGLGAELVEYAFAGTTSRV 753 (1520)
T ss_dssp HHHHHHHTTSSC-----C-CCCHHHHHHHHHHHHHHHHHHHHHHTTCCBHHHHHTCCCEEESSBCHHHHHHHSTTCCCTT
T ss_pred CCCHHHHHCCCC-----C-CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCC
T ss_conf 441124433887-----8-8999999999999998778999702047666305773133203798799998479898577
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHC----------CCHH
Q ss_conf 788968999999999997089999999996686799997300024897655698999999999913----------9989
Q 000266 896 DGATFEVLASDALHLHELAFPTRILPPGSAEAVALPNPGDYHWRKGGEIHLNDPLAIAKLQEAARG----------NSVA 965 (1760)
Q Consensus 896 ~G~~~~~i~~~~~~~h~~a~~~~~~~~~~~~~~~l~~~g~y~~r~~ge~H~~~p~~i~~lq~a~~~----------~~~~ 965 (1760)
+|++|++|++|++.||+.||+.+ ...|+.+|+|+||++||+|.|+|++|+.||+++++ ++|+
T Consensus 754 ~G~~~~~i~~~~~~~h~~a~~~~--------~~~l~~~g~~~~r~~ge~h~~~p~~i~~l~~~~~~g~~~~~~~~~~~~~ 825 (1520)
T 1ofd_A 754 GGLTIADVAGEVMVFHGMAFPEM--------AKKLENFGFVNYRPGGEYHMNSPEMSKSLHKAVAAYKVGGNGNNGEAYD 825 (1520)
T ss_dssp CCBCHHHHHHHHHHHHHHHC------------CCCCCCSSSSCCTTSSCCSCCHHHHHHHHHHHHHC------------C
T ss_pred CCCCHHHHHHHHHHHHHHHCCCC--------CCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHH
T ss_conf 78799999999999999865864--------5768889765337898777789899999999995456755445668889
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCEECCCC
Q ss_conf 99999999760026754334334456789999888777333346447457984347499999999999970996321699
Q 000266 966 AYKEYSKRIQELNKTCNLRGLLKFKEADVKIPLEEVEPASEIVKRFCTGAMSYGSISLEAHTTLATAMNKIGGKSNTGEG 1045 (1760)
Q Consensus 966 ~~~~y~~~~~~~~~~~~~r~ll~~~~~~~~i~~~~Ve~~t~i~~Pf~isaMS~Gsls~ea~~aLA~Aa~~~G~~s~sGeG 1045 (1760)
.|+.|++..++ .++.++|+++.|+.+.+++++++|+|+++|..||+++|||+|++|+++|++||+||+++|+++++|||
T Consensus 826 ~~~~~~~~~~~-~~~~~~r~l~~~~~~~~~i~~~ev~~~~~I~~Pfii~aMS~GslS~ea~~aLA~Aas~aGg~~~tGeG 904 (1520)
T 1ofd_A 826 HYELYRQYLKD-RPVTALRDLLDFNADQPAISLEEVESVESIVKRFCTGGMSLGALSREAHETLAIAMNRLGAKSNSGEG 904 (1520)
T ss_dssp HHHHHHHHHHT-CCSCSGGGGEEECCSSCCCCGGGSCCHHHHHTTEECCCBCTTTSCHHHHHHHHHHHHHHTCBCEECTT
T ss_pred HHHHHHHHHCC-CCCCCHHHHCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEECCC
T ss_conf 99999862057-89862311012357889988033122136457668457675403699999999999971993486799
Q ss_pred CCCCCCCC------------------CCCCCCCCHHHHHEEECCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 99923657------------------678999841343123214488677956434712677766305788988987875
Q 000266 1046 GEQPSRME------------------PLSDGSMNPKRSAIKQVASGRFGVSSYYLTNADELQIKMAQGAKPGEGGELPGH 1107 (1760)
Q Consensus 1046 g~~~e~~~------------------~~~~g~~~~~~s~IkQvasgrFGvt~~~L~~a~~ieIKiaQGAKpG~GG~Lpg~ 1107 (1760)
+++++++. ..++| +...+.|+|+++++|||+.+++.++++||||++||||||+||+||+.
T Consensus 905 g~~pe~~~~eir~~~~~~~~~~p~~~~~~nG--~~~~~~I~Ql~sg~FGVn~~~l~~ad~IeIKi~QGAKpG~GG~Lp~~ 982 (1520)
T 1ofd_A 905 GEDVVRYLTLDDVDSEGNSPTLPHLHGLQNG--DTANSAIKQIASGRFGVTPEYLMSGKQLEIKMAQGAKPGEGGQLPGK 982 (1520)
T ss_dssp CCCGGGGSCCCCCCTTSCCTTSTTCCSCCTT--CCCCCSEEEECTTCTTCCHHHHHHCSEEEEECCCTTSTTSCCEECGG
T ss_pred CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC--CHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCHH
T ss_conf 8899999764201223333235322234675--06878999856888755756556367899987335777777888989
Q ss_pred CCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCC
Q ss_conf 42189998808988633338999999999998999999999739999268998113688999999998499799992399
Q 000266 1108 KVIGDIAVTRNSTAGVGLISPPPHHDIYSIEDLAQLIYDLKNANPGARISVKLVSEAGVGVIASGVVKGHADHVLISGHD 1187 (1760)
Q Consensus 1108 kv~~~IA~~r~~~~G~~lisP~~h~diySiEdL~qlI~~Lr~~~p~~pI~VKlv~~~Gig~vA~~aakaGAD~IvIsG~~ 1187 (1760)
||++++|.+|++++|++++||++|||||+++++.++|++||+.+|++||+||+++..|++++|.+++++|||+|+|||++
T Consensus 983 kV~~~iA~~R~~~~Gv~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~kAGAD~IvVsG~e 1062 (1520)
T 1ofd_A 983 KVSEYIAMLRRSKPGVTLISPPPHHDIYSIEDLAQLIYDLHQINPEAQVSVKLVAEIGIGTIAAGVAKANADIIQISGHD 1062 (1520)
T ss_dssp GCCHHHHHHHTSCTTCCEECCSSCTTCSSHHHHHHHHHHHHHHCTTSEEEEEEECSTTHHHHHHHHHHTTCSEEEEECTT
T ss_pred HHHHHHHHHCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCC
T ss_conf 99999999739999987427898767688799999999999727899779995688985999999998399899995899
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCC
Q ss_conf 99899852221246888899999999998847999840999869867999999999919981123516799830100113
Q 000266 1188 GGTGASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTILQTDGQLKTGRDVAIAALLGAEEFGFSTAPLITLGCIMMRK 1267 (1760)
Q Consensus 1188 GGTGaa~~~si~~~GlP~~~~L~ev~q~L~~~glr~rV~IiadGGIrtG~DV~KALaLGAdaVgiGta~L~algc~~~r~ 1267 (1760)
|||++++..+++++|+||+.+|+++++++..+++|++|+||+||||+||.||+||++|||++|++||++|+++||.|||+
T Consensus 1063 GGTgasp~~~~~~~GlPt~~aL~ev~~al~~~glr~~IpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~algc~~~r~ 1142 (1520)
T 1ofd_A 1063 GGTGASPLSSIKHAGSPWELGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALMGAEEYGFGSIAMIAEGCIMARV 1142 (1520)
T ss_dssp CCCSSEEHHHHHHBCCCHHHHHHHHHHHHHHTTCGGGCEEEEESSCCSHHHHHHHHHTTCSEEECSHHHHHHTTCCCCCC
T ss_pred CCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHH
T ss_conf 86688760430487420999999999999861888882699979989899999999859985677389899888789875
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEECCCCCCCCHHHHCCCCCC
Q ss_conf 43598987322139356742089899999999999999999999529988333208974132130001330101389972
Q 000266 1268 CHKNTCPVGIATQDPVLREKFAGEPEHVINFFFMLAEELREIMSQLGFRTITEMIGRSDMLEVDKEVTKTNEKLENIDLS 1347 (1760)
Q Consensus 1268 c~~~~cp~giatqdp~lr~~~~g~~e~V~n~l~~l~~ELr~~Ma~lG~~si~elvgr~dll~~~~~~~~~~~~~~~~dls 1347 (1760)
||+|+||+|||||||.|+++|.+++++|.||+..+.+||+++|+.+|+++++||+|+++++...+.+ .+||.+++||+
T Consensus 1143 Ch~~~CP~Gvatqdp~L~~~~~gg~e~V~n~l~~l~~ELr~~Ma~lG~~si~eL~gr~dll~~~~~~--~~~~~~~ldl~ 1220 (1520)
T 1ofd_A 1143 CHTNNCPVGVATQQERLRQRFKGVPGQVVNFFYFIAEEVRSLLAHLGYRSLDDIIGRTDLLKVRSDV--QLSKTQNLTLD 1220 (1520)
T ss_dssp GGGTCCTTSSSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHTCSCGGGTTTCGGGEEECSSC--CCSSSSCCCCH
T ss_pred CCCCCCCCEEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEECCCCC--CCHHHCCCCHH
T ss_conf 4589998411765788885458847899999999999999999983899999982864088536443--31766488878
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH--HHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 3457655789875531102367987636779999--99999997099689983101567611023568998761238999
Q 000266 1348 LLLRPAADLRPEAAQYCVQKQDHGLDMALDQKLI--KLSKAALEKALPVYIETPVCNVNRAVGTMLSHEVTKRYHLVGLP 1425 (1760)
Q Consensus 1348 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~ld~~~~--~~~~~~~~~~~~~~~~~~i~n~dR~vG~~ls~~i~~~~g~~gl~ 1425 (1760)
.||+++.. .++ +.+|+.+|+|.++..||++++ ++++++|+++.++.++++|.|+||++|++|||+|+++||..||
T Consensus 1221 ~~l~~~~~-~~~-~~~~~~~~~~~~~~~ld~~l~~~~~~~~a~~~~~~~~~~~~i~n~~r~~g~~l~~~i~~~~g~~Gl- 1297 (1520)
T 1ofd_A 1221 CLLNLPDT-KQN-RQWLNHEPVHSNGPVLDDDILADPDIQEAINHQTTATKTYRLVNTDRTVGTRLSGAIAKKYGNNGF- 1297 (1520)
T ss_dssp HHHCCCCC-SSC-CGGGCCCSSCCCCSCHHHHHHHSHHHHHHHHHCCEEEEEEEECTTCCSTTHHHHHHHHHHHTTTCC-
T ss_pred HHCCCCCC-CCC-CCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCCC-
T ss_conf 97088878-888-750345576652146789986508899998459957999412441020202025466776344678-
Q ss_pred CCCEEEEEECCCCCHHHHCCCCCCEEEEEECCCCHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEC
Q ss_conf 72299999467420221028899689999147761200899966999399999999986520103653037542799935
Q 000266 1426 ADTIHIKLTGSAGQSVGAFLCPGILLELEGDSNDYVGKGLSGGKIVAYPPKGSLFDPKVNIVIGNVALYGATSGEAYFNG 1505 (1760)
Q Consensus 1426 ~~~i~i~~~G~aGq~~Gaf~~~G~~i~v~G~a~dyvGkgmsGG~IvV~g~~~~~f~~~~~~i~Gn~~~yGatgG~i~v~G 1505 (1760)
.++|+|+++|+||||||+||++|++|+|+|||||||||+|+||+|+|+||+++.|.+++|+|+||+|+|||+||++||+|
T Consensus 1298 ~~~i~i~v~G~aGq~~Ga~m~~G~~i~v~G~A~dyvGkgm~GG~IvV~g~~~~~~~~~~n~i~Gn~~~~ga~gG~i~V~G 1377 (1520)
T 1ofd_A 1298 EGNITLNFQGAAGQSFGAFNLDGMTLHLQGEANDYVGKGMNGGEIVIVPHPQASFAPEDNVIIGNTCLYGATGGNLYANG 1377 (1520)
T ss_dssp CCEEEEEEEEEECTTTTTTCCTTEEEEEEEEECSCTTTTCCSSEEEEECCTTCCSCGGGSBCSCSSTTTTCCSCEEEESS
T ss_pred CCEEEEEEECCHHHHHHHHCCCCCEEEEEEECCHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEE
T ss_conf 86189999787778886227899889999606646537666988999799766555434643323544205075899975
Q ss_pred CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCHHHCCCCCCCEEEECCC--CH
Q ss_conf 6654200015885999927776201235584799938878764589745299997577311002595623231189--88
Q 000266 1506 MAAERFCVRNSGARAVVEGVGDHGCEYMTGGTVVVLGKTGRNFAAGMSGGIAYVLDVDGKFRSRCNPELVDLDKVE--EE 1583 (1760)
Q Consensus 1506 ~aG~r~gvr~sG~~~VV~G~Gd~~~eyMtgG~ivVlG~~G~~~gagM~gG~iyv~~~~~~~~~~~n~~~V~l~~~~--~~ 1583 (1760)
+||+|||+||||+++||+|+|||+|||||||+|||||++|+|+|+||+||+|||+|++++|..+||.+||++ ++ ++
T Consensus 1378 ~aG~R~gvr~sg~~iVV~G~Gd~~~eyMtGG~vvVlG~~G~~~gagM~GG~iyv~~~~~~f~~~~n~e~v~~--~~~~~~ 1455 (1520)
T 1ofd_A 1378 RAGERFAVRNSVGKAVIEGAGDHCCEYMTGGVIVVLGPVGRNVGAGMTGGLAYFLDEVGDLPEKINPEIITL--QRITAS 1455 (1520)
T ss_dssp BCCSSTTTTCSSCEEEESCCCSSTTTTCEEEEEEECSCCCSSBTTTCCEEEEEEECSSSCHHHHBCTTTCEE--ECCCCH
T ss_pred ECCHHHHHHCCCCEEEECCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHCCHHHHHH--CCCCCH
T ss_conf 430122212348779956843423301448379964777867057875718999678777444158888775--035768
Q ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHH
Q ss_conf 899999999999999827199999986132117994999230169999999
Q 000266 1584 EDIITLRMMIQQHQRYTNSQLAKEVLADFENLLPKFIKVFPRDYKRVLASM 1634 (1760)
Q Consensus 1584 ~d~~~l~~ll~~h~~~t~s~~a~~iL~~~~~~~~~F~kv~P~~y~~~l~~~ 1634 (1760)
+|+++|+.||++|+++|+|+.|+.||+||+.++.+|+||+|++||++|+..
T Consensus 1456 ~d~~~l~~ll~~h~~~tgs~~a~~iL~~~~~~~~~F~kv~P~~~~~~~~~~ 1506 (1520)
T 1ofd_A 1456 KGEEQLKSLITAHVEHTGSPKGKAILANWSDYLGKFWQAVPPSEKDSPEAN 1506 (1520)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHHHHHTHHHHHTTEEEEECTTSTTSTTTC
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHH
T ss_conf 899999999999997767888999997478775187999458779999988
No 3
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=1.00 E-value=1 Score=272.59 Aligned_cols=275 Identities=19% Similarity=0.145 Sum_probs=209.8
Q ss_pred CCCCCCCCCC-CCCCCCCCCCCCCCCCCC-----CEEECCCCCCCC-CHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCC
Q ss_conf 4334334456-789999888777333346-----447457984347-499999999999970996321699999236576
Q 000266 982 NLRGLLKFKE-ADVKIPLEEVEPASEIVK-----RFCTGAMSYGSI-SLEAHTTLATAMNKIGGKSNTGEGGEQPSRMEP 1054 (1760)
Q Consensus 982 ~~r~ll~~~~-~~~~i~~~~Ve~~t~i~~-----Pf~isaMS~Gsl-s~ea~~aLA~Aa~~~G~~s~sGeGg~~~e~~~~ 1054 (1760)
.|-++. |.. ..|.+++++||++++|++ ||+++||++|.. +.+++.+||++|.++|+.+++|++....+.-..
T Consensus 55 ~fd~i~-l~~~~lP~~~~~~vd~st~i~g~~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~vGs~~~~le~~~~ 133 (365)
T 3sr7_A 55 SFDDIE-LIHHSLPDYDLAEIDLSTHFAGQDFDFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVTGSYSTALKNPDD 133 (365)
T ss_dssp GGGGEE-ECCCSSCCSCGGGCCCCEEETTEEESSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC------------
T ss_pred CCCEEE-EECCCCCCCCCCCCCCEEEECCEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCC
T ss_conf 856699-8787787678565664488899870585475356578721527999999999982997121555224557331
Q ss_pred CCCCCCCHHHHHEEECCCCCCCC-------CHH-H-----HCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCC
Q ss_conf 78999841343123214488677-------956-4-----3471267776630578898898787542189998808988
Q 000266 1055 LSDGSMNPKRSAIKQVASGRFGV-------SSY-Y-----LTNADELQIKMAQGAKPGEGGELPGHKVIGDIAVTRNSTA 1121 (1760)
Q Consensus 1055 ~~~g~~~~~~s~IkQvasgrFGv-------t~~-~-----L~~a~~ieIKiaQGAKpG~GG~Lpg~kv~~~IA~~r~~~~ 1121 (1760)
. + ..|+|.++..+.. +.+ . ...+++++ .|.++
T Consensus 134 --~----~--~~v~r~~P~~~~ianig~~~~~e~~~~~ve~~~adal~---------------------------ihln~ 178 (365)
T 3sr7_A 134 --T----S--YQVKKSRPHLLLATNIGLDKPYQAGLQAVRDLQPLFLQ---------------------------VHINL 178 (365)
T ss_dssp -------------------CCEEEEEETTSCHHHHHHHHHHHCCSCEE---------------------------EEECH
T ss_pred --C----C--EEEHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEE---------------------------EECCC
T ss_conf --4----5--57541179973799967998989999999866999899---------------------------72645
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC-----
Q ss_conf 633338999999999998999999999739999268998113688999999998499799992399998998522-----
Q 000266 1122 GVGLISPPPHHDIYSIEDLAQLIYDLKNANPGARISVKLVSEAGVGVIASGVVKGHADHVLISGHDGGTGASRWT----- 1196 (1760)
Q Consensus 1122 G~~lisP~~h~diySiEdL~qlI~~Lr~~~p~~pI~VKlv~~~Gig~vA~~aakaGAD~IvIsG~~GGTGaa~~~----- 1196 (1760)
.+++++|+.++++ ++|.+.|.++|+.+ ++||+||++...-....|..+.++|+|+|+|+|+ |||.++...
T Consensus 179 ~qe~~~p~Gd~~~---~~~~~~I~~l~~~~-~~PVivK~vg~g~s~e~A~~l~~aGad~I~V~g~-GGt~~a~ie~~r~~ 253 (365)
T 3sr7_A 179 MQELLMPEGEREF---RSWKKHLSDYAKKL-QLPFILKEVGFGMDVKTIQTAIDLGVKTVDISGR-GGTSFAYIENRRGG 253 (365)
T ss_dssp HHHHTSSSSCCCC---HHHHHHHHHHHHHC-CSCEEEEECSSCCCHHHHHHHHHHTCCEEECCCB-C-------------
T ss_pred CCCCCCCCCCCCH---HHHHHHHHHHHHHH-CCCEEEEECCCCCCHHHHHHHHHCCCCEEEEECC-CCCCCCHHHCCCCC
T ss_conf 4313589998768---89999999999862-9988999789899899999999749999999379-97545022000024
Q ss_pred ---CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
Q ss_conf ---21246888899999999998847999840999869867999999999919981123516799830100113435989
Q 000266 1197 ---GIKNAGLPWELGLAETHQTLVANDLRGRTILQTDGQLKTGRDVAIAALLGAEEFGFSTAPLITLGCIMMRKCHKNTC 1273 (1760)
Q Consensus 1197 ---si~~~GlP~~~~L~ev~q~L~~~glr~rV~IiadGGIrtG~DV~KALaLGAdaVgiGta~L~algc~~~r~c~~~~c 1273 (1760)
...+||+|+...|+++.. ++++++||++|||++|.|++||++|||++|++||++|++++|.
T Consensus 254 ~~~~~~~~g~pt~~~L~~v~~------~~~~ipvia~GGI~~g~Dv~KaLalGAdaV~ig~~~l~a~~~~---------- 317 (365)
T 3sr7_A 254 NRSYLNQWGQTTAQVLLNAQP------LMDKVEILASGGIRHPLDIIKALVLGAKAVGLSRTMLELVEQH---------- 317 (365)
T ss_dssp -CGGGTTCSCBHHHHHHHHGG------GTTTSEEEECSSCCSHHHHHHHHHHTCSEEEESHHHHHHHHHS----------
T ss_pred CCCCCCCCCCCHHHHHHHHHH------HCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHC----------
T ss_conf 544555666569999999997------4699749985898989999999980999999879999998735----------
Q ss_pred CCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEECC
Q ss_conf 8732213935674208989999999999999999999952998833320897413213
Q 000266 1274 PVGIATQDPVLREKFAGEPEHVINFFFMLAEELREIMSQLGFRTITEMIGRSDMLEVD 1331 (1760)
Q Consensus 1274 p~giatqdp~lr~~~~g~~e~V~n~l~~l~~ELr~~Ma~lG~~si~elvgr~dll~~~ 1331 (1760)
++++|.+++..+.+||+.+|+.+|+++++|| .+.+++...
T Consensus 318 -----------------G~~~v~~~l~~l~~eL~~~m~~~G~~si~eL-~~~~~~~~~ 357 (365)
T 3sr7_A 318 -----------------SVHEVIAIVNGWKEDLRLIMCALNCQTIAEL-RNVDYLLYG 357 (365)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHHHHTTCSSTGGG-GGCCEEECH
T ss_pred -----------------CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH-CCCCEEECC
T ss_conf -----------------8699999999999999999998199379996-669889765
No 4
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=1.00 E-value=1 Score=261.06 Aligned_cols=313 Identities=17% Similarity=0.178 Sum_probs=223.4
Q ss_pred HHHHHHHHHHCC-CHHHHHHHHHHHHHCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-----CEEECCCCCCC
Q ss_conf 999999999139-9899999999976002----6754334334456789999888777333346-----44745798434
Q 000266 951 AIAKLQEAARGN-SVAAYKEYSKRIQELN----KTCNLRGLLKFKEADVKIPLEEVEPASEIVK-----RFCTGAMSYGS 1020 (1760)
Q Consensus 951 ~i~~lq~a~~~~-~~~~~~~y~~~~~~~~----~~~~~r~ll~~~~~~~~i~~~~Ve~~t~i~~-----Pf~isaMS~Gs 1020 (1760)
.+.-+++++|.. +...|.||.+.++++. |...++.+. |+ ||...+++++|++|++++ ||+++|+++..
T Consensus 4 ~~~d~~~~A~~~lp~~~~~Y~~~ga~~e~t~~~N~~af~~~~-l~-prvl~dv~~~d~~t~llG~~~~~P~~iaP~g~~~ 81 (352)
T 3sgz_A 4 CLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIR-LR-PRYLRDMSKVDTRTTIQGQEISAPICISPTAFHS 81 (352)
T ss_dssp SHHHHHHHHHHTSCHHHHHHHHCCCTTCHHHHHHHHHHHTCC-BC-CCCSSCCSSCBCCEEETTEEESSSEEECCCSCGG
T ss_pred CHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHCE-EE-CCCCCCCCCCCCCEEECCCCCCCCCEECHHHHHH
T ss_conf 899999999987899899998638863599999999998520-30-6644788889872677883147741455698887
Q ss_pred C-CHHHHHHHHHHHHHCCCC-EECCCCCCCCCCCCCCCCCCCCHHHHHEEECCCCC-CCCCHHHHCCCHHHHHHHHCCCC
Q ss_conf 7-499999999999970996-32169999923657678999841343123214488-67795643471267776630578
Q 000266 1021 I-SLEAHTTLATAMNKIGGK-SNTGEGGEQPSRMEPLSDGSMNPKRSAIKQVASGR-FGVSSYYLTNADELQIKMAQGAK 1097 (1760)
Q Consensus 1021 l-s~ea~~aLA~Aa~~~G~~-s~sGeGg~~~e~~~~~~~g~~~~~~s~IkQvasgr-FGvt~~~L~~a~~ieIKiaQGAK 1097 (1760)
+ .++++.++|+||.+.|+. +.|..++.+.|++.....+ ...++|++..+ ...+...+..+++. |.+
T Consensus 82 l~~~~ge~~~araa~~~gi~~~lSt~ss~s~e~v~~~~~~-----~~~wfQlY~~~d~~~~~~l~~ra~~a------G~~ 150 (352)
T 3sgz_A 82 IAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPE-----GFRWFQLYMKSDWDFNKQMVQRAEAL------GFK 150 (352)
T ss_dssp GTCTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHSTT-----CEEEEECCCCSCHHHHHHHHHHHHHT------TCC
T ss_pred HCCCCHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHCCC-----CCCEECCCCCCCHHHHHHHHHHHHHC------CCC
T ss_conf 4576078999999987699867579988999999973657-----66321264689889999999999986------999
Q ss_pred CCC-CCCCC--CCCCHHHHHHHHCCCC---------------CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 898-89878--7542189998808988---------------63333899999999999899999999973999926899
Q 000266 1098 PGE-GGELP--GHKVIGDIAVTRNSTA---------------GVGLISPPPHHDIYSIEDLAQLIYDLKNANPGARISVK 1159 (1760)
Q Consensus 1098 pG~-GG~Lp--g~kv~~~IA~~r~~~~---------------G~~lisP~~h~diySiEdL~qlI~~Lr~~~p~~pI~VK 1159 (1760)
.-. --..| |.. ..++..-...++ +..+.....++. .+|++ |.++|+.+ +.||++|
T Consensus 151 alvlTvD~p~~g~R-~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~w~~----i~~lr~~~-~~PvivK 223 (352)
T 3sgz_A 151 ALVITIDTPVLGNR-RRDKRNQLNLEANILKAALRALKEEKPTQSVPVLFPKAS-FCWND----LSLLQSIT-RLPIILK 223 (352)
T ss_dssp CEEEECSCSSCCCC-HHHHHHHHHSCHHHHTTCC---------------CCCTT-CCHHH----HHHHHHHC-CSCEEEE
T ss_pred EEEEEECCCCCCCC-HHHHHCCCCCCCCCCHHHHCCCCCCCCCCHHHHHCCCCC-CCHHH----HHHHHHHC-CCCEEEE
T ss_conf 89998588988864-665533777886433444303233346412555405887-89999----99999862-9987998
Q ss_pred ECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHH
Q ss_conf 81136889999999984997999923999989985222124688889999999999884799984099986986799999
Q 000266 1160 LVSEAGVGVIASGVVKGHADHVLISGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTILQTDGQLKTGRDV 1239 (1760)
Q Consensus 1160 lv~~~Gig~vA~~aakaGAD~IvIsG~~GGTGaa~~~si~~~GlP~~~~L~ev~q~L~~~glr~rV~IiadGGIrtG~DV 1239 (1760)
++... ..|..+.++|+|+|+|+||+|.. .+.++|+...|+++.+.+ +++++||++|||++|.||
T Consensus 224 ~v~~~---e~A~~a~~~GaD~I~vsn~GG~~--------~d~~~~~~~~L~~i~~av-----~~~ipVia~GGI~~g~Dv 287 (352)
T 3sgz_A 224 GILTK---EDAELAMKHNVQGIVVSNHGGRQ--------LDEVSASIDALREVVAAV-----KGKIEVYMDGGVRTGTDV 287 (352)
T ss_dssp EECSH---HHHHHHHHTTCSEEEECCGGGTS--------SCSSCCHHHHHHHHHHHH-----TTSSEEEEESSCCSHHHH
T ss_pred ECCCH---HHHHHHHHCCCCEEEEECCCCCC--------CCCCCCHHHHHHHHHHHH-----CCCCEEEEECCCCCHHHH
T ss_conf 40868---99999997599999985899776--------678862899999999983-----799829997999999999
Q ss_pred HHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 99999199811235167998301001134359898732213935674208989999999999999999999952998833
Q 000266 1240 AIAALLGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFMLAEELREIMSQLGFRTIT 1319 (1760)
Q Consensus 1240 ~KALaLGAdaVgiGta~L~algc~~~r~c~~~~cp~giatqdp~lr~~~~g~~e~V~n~l~~l~~ELr~~Ma~lG~~si~ 1319 (1760)
+|+++|||++|++||++|++++|. ++++|.++++.+.+|++..|+++|+++++
T Consensus 288 ~kaLalGA~aV~iGr~~l~~l~~~---------------------------G~~gv~~~l~~l~~el~~~m~~~G~~~i~ 340 (352)
T 3sgz_A 288 LKALALGARCIFLGRPILWGLACK---------------------------GEDGVKEVLDILTAELHRCMTLSGCQSVA 340 (352)
T ss_dssp HHHHHTTCSEEEESHHHHHHHHHH---------------------------HHHHHHHHHHHHHHHHHHHHHHHTCSBGG
T ss_pred HHHHHCCCCEEEECHHHHHHHHHC---------------------------CCHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_conf 999985999999889999998855---------------------------82889999999999999999982998699
Q ss_pred HHCCCCCE
Q ss_conf 32089741
Q 000266 1320 EMIGRSDM 1327 (1760)
Q Consensus 1320 elvgr~dl 1327 (1760)
|+ .+..+
T Consensus 341 el-~~~~~ 347 (352)
T 3sgz_A 341 EI-SPDLI 347 (352)
T ss_dssp GC-CGGGB
T ss_pred HH-HHHCC
T ss_conf 98-66312
No 5
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=1.00 E-value=1 Score=259.58 Aligned_cols=324 Identities=16% Similarity=0.173 Sum_probs=227.6
Q ss_pred HHHHHHHHHHHCC-CHHHHHHHHHHHHHCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-----CEEECCCCCC
Q ss_conf 9999999999139-9899999999976002----6754334334456789999888777333346-----4474579843
Q 000266 950 LAIAKLQEAARGN-SVAAYKEYSKRIQELN----KTCNLRGLLKFKEADVKIPLEEVEPASEIVK-----RFCTGAMSYG 1019 (1760)
Q Consensus 950 ~~i~~lq~a~~~~-~~~~~~~y~~~~~~~~----~~~~~r~ll~~~~~~~~i~~~~Ve~~t~i~~-----Pf~isaMS~G 1019 (1760)
..+.-+++.+|.. +...|.||...++++. |...|..+. |+ ++...+++++|++++|++ ||+++||+++
T Consensus 28 ~~~~d~~~~A~~~lp~~~~~y~~~ga~~e~t~~~N~~~f~~i~-l~-pr~L~~~~~~d~st~i~G~~l~~Pi~iAPmg~~ 105 (392)
T 2nzl_A 28 ICINDYEQHAKSVLPKSIYDYYRSGANDEETLADNIAAFSRWK-LY-PRMLRNVAETDLSTSVLGQRVSMPICVGATAMQ 105 (392)
T ss_dssp CSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHHHHHSC-BC-CCCSSCCTTCBCCEEETTEEESSSEEECCCSCG
T ss_pred CCHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHEEE-EE-HHHCCCCCCCCCCEEECCEECCCCEEECCCCCC
T ss_conf 9999999999865897777551877884377999998643478-64-142068767776147898865785376464344
Q ss_pred CCC-HHHHHHHHHHHHHCCCCEECCCCC-CCCCCCCCCCCCCCCHHHHHEEECCC-CCCCCCHHHHCCCHHHHHH---HH
Q ss_conf 474-999999999999709963216999-99236576789998413431232144-8867795643471267776---63
Q 000266 1020 SIS-LEAHTTLATAMNKIGGKSNTGEGG-EQPSRMEPLSDGSMNPKRSAIKQVAS-GRFGVSSYYLTNADELQIK---MA 1093 (1760)
Q Consensus 1020 sls-~ea~~aLA~Aa~~~G~~s~sGeGg-~~~e~~~~~~~g~~~~~~s~IkQvas-grFGvt~~~L~~a~~ieIK---ia 1093 (1760)
.++ ++++.++|++|.+.|+.++.++.+ .+.|++..... ....+.|++. ...+.+.+.+..+++...+ +.
T Consensus 106 ~l~~~~~e~~laraA~~~G~~~~~s~~~s~~le~v~~~~~-----~~~~~~QLy~~~d~~~~~~~~~ra~~~G~~al~it 180 (392)
T 2nzl_A 106 RMAHVDGELATVRACQSLGTGMMLSSWATSSIEEVAEAGP-----EALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVT 180 (392)
T ss_dssp GGTSTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHCT-----TSEEEEEECCBSSHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCCCCHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHCC-----CCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 6664469999999999759986446447799999997457-----89679999841887899999999997799999995
Q ss_pred CCCCCCCC---------CCCCCC----CCHHHHHH-H--HCCCCCC---CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 05788988---------987875----42189998-8--0898863---3338999999999998999999999739999
Q 000266 1094 QGAKPGEG---------GELPGH----KVIGDIAV-T--RNSTAGV---GLISPPPHHDIYSIEDLAQLIYDLKNANPGA 1154 (1760)
Q Consensus 1094 QGAKpG~G---------G~Lpg~----kv~~~IA~-~--r~~~~G~---~lisP~~h~diySiEdL~qlI~~Lr~~~p~~ 1154 (1760)
.++ |..| -.+|.+ .+...+.. . +....+. .++++..++++ +++ .|.++|+.+ +.
T Consensus 181 vd~-p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~d~~~-~~~----~i~~lr~~~-~~ 253 (392)
T 2nzl_A 181 VDT-PYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSI-SWE----DIKWLRRLT-SL 253 (392)
T ss_dssp CSC-SSCCCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHHBCTTC-CHH----HHHHHC--C-CS
T ss_pred CCC-CCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHH-HHH----HHHHHHHHH-CC
T ss_conf 999-87562157675234776333145555543035765556676019999753279277-899----999999860-99
Q ss_pred CEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf 26899811368899999999849979999239999899852221246888899999999998847999840999869867
Q 000266 1155 RISVKLVSEAGVGVIASGVVKGHADHVLISGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTILQTDGQLK 1234 (1760)
Q Consensus 1155 pI~VKlv~~~Gig~vA~~aakaGAD~IvIsG~~GGTGaa~~~si~~~GlP~~~~L~ev~q~L~~~glr~rV~IiadGGIr 1234 (1760)
||+||++.. ...|..+.++|+|+|+|+||+|++ .++|+|+...|+++++.+ +++++||++|||+
T Consensus 254 PvivKgv~~---~e~A~~a~~aGad~I~vs~~ggr~--------~~~g~~~~~~l~~v~~av-----~~~ipVia~GGI~ 317 (392)
T 2nzl_A 254 PIVAKGILR---GDDAREAVKHGLNGILVSNHGARQ--------LDGVPATIDVLPEIVEAV-----EGKVEVFLDGGVR 317 (392)
T ss_dssp CEEEEEECC---HHHHHHHHHTTCCEEEECCGGGTS--------STTCCCHHHHHHHHHHHH-----TTSSEEEECSSCC
T ss_pred CEEEEECCC---HHHHHHHHHCCCCEEEECCCCCCC--------CCCCCCHHHHHHHHHHHC-----CCCCEEEEECCCC
T ss_conf 989994698---999999997599999957998776--------888867599999999980-----8998799979999
Q ss_pred CHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999991998112351679983010011343598987322139356742089899999999999999999999529
Q 000266 1235 TGRDVAIAALLGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFMLAEELREIMSQLG 1314 (1760)
Q Consensus 1235 tG~DV~KALaLGAdaVgiGta~L~algc~~~r~c~~~~cp~giatqdp~lr~~~~g~~e~V~n~l~~l~~ELr~~Ma~lG 1314 (1760)
+|.||+|+++||||+|++||++|++++|. ++++|.+++..+.+|++..|+.+|
T Consensus 318 ~g~Dv~kalalGAd~V~iGr~~l~~~~~~---------------------------g~~gv~~~l~~l~~el~~~m~~~G 370 (392)
T 2nzl_A 318 KGTDVLKALALGAKAVFVGRPIVWGLAFQ---------------------------GEKGVQDVLEILKEEFRLAMALSG 370 (392)
T ss_dssp SHHHHHHHHHTTCSEEEECHHHHHHHHHH---------------------------HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHCCCEEEECHHHHHHHHHC---------------------------CHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999994899268889999988744---------------------------748899999999999999999838
Q ss_pred CCCHHHHCCCCCEEECC
Q ss_conf 98833320897413213
Q 000266 1315 FRTITEMIGRSDMLEVD 1331 (1760)
Q Consensus 1315 ~~si~elvgr~dll~~~ 1331 (1760)
+++++|+ .+.++...+
T Consensus 371 ~~~i~el-~~~~l~~~~ 386 (392)
T 2nzl_A 371 CQNVKVI-DKTLVRKNP 386 (392)
T ss_dssp CSBGGGC-CGGGBC---
T ss_pred CCCHHHH-HHHHHHHCC
T ss_conf 8769897-665603176
No 6
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=1.00 E-value=1 Score=258.53 Aligned_cols=297 Identities=17% Similarity=0.178 Sum_probs=216.5
Q ss_pred CCCCCCCCCCCCCCCCCC-----CEEECCCCCCCC-CHHHHHHHHHHHHHCCCCEECCCCCC---CCCCCCCCCCCCCCH
Q ss_conf 789999888777333346-----447457984347-49999999999997099632169999---923657678999841
Q 000266 992 ADVKIPLEEVEPASEIVK-----RFCTGAMSYGSI-SLEAHTTLATAMNKIGGKSNTGEGGE---QPSRMEPLSDGSMNP 1062 (1760)
Q Consensus 992 ~~~~i~~~~Ve~~t~i~~-----Pf~isaMS~Gsl-s~ea~~aLA~Aa~~~G~~s~sGeGg~---~~e~~~~~~~g~~~~ 1062 (1760)
+.|.+++++||++++|++ ||+++||++|+. ..+.++.||.+|.++|+.+.+||+.. +|+.. ++
T Consensus 38 ~lp~~~~~~vd~st~~~g~~l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~~--------~s 109 (368)
T 3vkj_A 38 GFPGISFSEINTKTKFFRKEISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEAR--------ES 109 (368)
T ss_dssp SSCBSBGGGCBCCEEETTEEESSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEECCCCHHHHHCGGGS--------HH
T ss_pred CCCCCCCCCCCCEEEECCEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCHHCCCCHHHH--------HH
T ss_conf 7876671115522678987136885873577887226579999999999839773640222104797788--------65
Q ss_pred HHHHEEECCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCHH---HHHHHHCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 3431232144886779564347126777663057889889878754218---9998808988633338999999999998
Q 000266 1063 KRSAIKQVASGRFGVSSYYLTNADELQIKMAQGAKPGEGGELPGHKVIG---DIAVTRNSTAGVGLISPPPHHDIYSIED 1139 (1760)
Q Consensus 1063 ~~s~IkQvasgrFGvt~~~L~~a~~ieIKiaQGAKpG~GG~Lpg~kv~~---~IA~~r~~~~G~~lisP~~h~diySiEd 1139 (1760)
. ..+++.++..+ .+.+....|++-+.+.+. ..+..+ .-|..-|.++.+++++|++++|++ ..
T Consensus 110 ~-~~vr~~ap~~~-----~~anlg~~ql~~~~~~~~-------~~~av~~~~a~al~Ihln~~~~~~~p~g~~~~~--~~ 174 (368)
T 3vkj_A 110 F-AIVRKVAPTIP-----IIANLGMPQLVKGYGLKE-------FQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQ--IY 174 (368)
T ss_dssp H-HHHHHHCSSSC-----EEEEEEGGGGGTTCCHHH-------HHHHHHHTTCSEEEEECCHHHHHHSSSCCCBCB--TH
T ss_pred H-HHHHHHCCCCC-----EECCCCEEECCCCCCHHH-------HHHHHHHHCCCCEEEEECCHHHHHCCCCCCHHH--HH
T ss_conf 9-99998676765-----203767012279899899-------999999960898499756606540888881266--78
Q ss_pred HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC----------------CCCCCCC
Q ss_conf 999999999739999268998113688999999998499799992399998998522----------------2124688
Q 000266 1140 LAQLIYDLKNANPGARISVKLVSEAGVGVIASGVVKGHADHVLISGHDGGTGASRWT----------------GIKNAGL 1203 (1760)
Q Consensus 1140 L~qlI~~Lr~~~p~~pI~VKlv~~~Gig~vA~~aakaGAD~IvIsG~~GGTGaa~~~----------------si~~~Gl 1203 (1760)
+.+.|.++++.+ ++||+||++...-....|..+.++|+|+|+|+|| |||+++... ...+||+
T Consensus 175 ~~~~i~~i~~~~-~vPVivK~vG~g~s~~~A~~l~~aGad~I~V~g~-GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~ 252 (368)
T 3vkj_A 175 ALEKLRDISKEL-SVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQ-GGTNWIAIEMIRDIRRGNWKAESAKNFLDWGV 252 (368)
T ss_dssp HHHHHHHHHTTC-SSCEEEECSSSCCCHHHHHHHHHTTCCEEECCCB-TSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSC
T ss_pred HHHHHHHHHHHC-CCCEEEEECCCCCCHHHHHHHHHCCCCEEEEECC-CCCCCCCHHHHHCCCCCCCCHHHCCCCCCCCC
T ss_conf 999999999972-9988999578999999999998489998999089-98764202322023432110010001245666
Q ss_pred CHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 88999999999988479998409998698679999999999199811235167998301001134359898732213935
Q 000266 1204 PWELGLAETHQTLVANDLRGRTILQTDGQLKTGRDVAIAALLGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPV 1283 (1760)
Q Consensus 1204 P~~~~L~ev~q~L~~~glr~rV~IiadGGIrtG~DV~KALaLGAdaVgiGta~L~algc~~~r~c~~~~cp~giatqdp~ 1283 (1760)
|+..+|.++++.+ .+++||++|||++|.|++|+++|||++|++||++|+++.
T Consensus 253 pt~~~l~~v~~~~------~~ipvia~GGI~~~~d~~kal~lGA~~v~ig~~~l~~~~---------------------- 304 (368)
T 3vkj_A 253 PTAASIMEVRYSV------PDSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKSAI---------------------- 304 (368)
T ss_dssp BHHHHHHHHHHHS------TTCEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHH----------------------
T ss_pred CHHHHHHHHHHHC------CCCCEEEECCCCCHHHHHHHHHCCCCEEEECHHHHHHHH----------------------
T ss_conf 5899999999975------898599879999999999999809998888399999984----------------------
Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEECCCCCCCCHH-HHCCCCCCCCCC
Q ss_conf 67420898999999999999999999995299883332089741321300013301-013899723457
Q 000266 1284 LREKFAGEPEHVINFFFMLAEELREIMSQLGFRTITEMIGRSDMLEVDKEVTKTNE-KLENIDLSLLLR 1351 (1760)
Q Consensus 1284 lr~~~~g~~e~V~n~l~~l~~ELr~~Ma~lG~~si~elvgr~dll~~~~~~~~~~~-~~~~~dls~~l~ 1351 (1760)
.++++|.+++..+.+||+.+|+.+|+++++|| .+.+++... .+ .+| +.+++|++.+..
T Consensus 305 ------~G~~~v~~~l~~l~~eL~~~m~~~G~~~i~el-~~~~l~~~~-~l--~~~~~~r~~~~~~~~~ 363 (368)
T 3vkj_A 305 ------EGKESLEQFFRKIIFELKAAMMLTGSKDVDAL-KKTSIVILG-KL--KEWAEYRGINLSIYEK 363 (368)
T ss_dssp ------HCHHHHHHHHHHHHHHHHHHHHHTTCCBHHHH-HTCCEEECH-HH--HHHHHHHTCCHHHHHH
T ss_pred ------CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH-CCCCEEECH-HH--HHHHHHCCCCHHHHHH
T ss_conf ------29199999999999999999998099889896-538788463-67--9999975998288876
No 7
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=1.00 E-value=1 Score=256.97 Aligned_cols=321 Identities=17% Similarity=0.178 Sum_probs=224.9
Q ss_pred HHHHHHHHHHCC-CHHHHHHHHHHHHHCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-----CEEECCCCCCC
Q ss_conf 999999999139-9899999999976002----6754334334456789999888777333346-----44745798434
Q 000266 951 AIAKLQEAARGN-SVAAYKEYSKRIQELN----KTCNLRGLLKFKEADVKIPLEEVEPASEIVK-----RFCTGAMSYGS 1020 (1760)
Q Consensus 951 ~i~~lq~a~~~~-~~~~~~~y~~~~~~~~----~~~~~r~ll~~~~~~~~i~~~~Ve~~t~i~~-----Pf~isaMS~Gs 1020 (1760)
.+.-+.+.+|.. +...|.||.+.++++. |...|..+. |+ ++..++++++|++++|++ ||+++||+++.
T Consensus 124 ~~~d~~~~A~~~l~~~~~~y~~~ga~~e~t~~~N~~af~~i~-l~-pr~L~dv~~~d~st~i~G~~l~~Pi~iAPma~~~ 201 (511)
T 1kbi_A 124 NLYDFEYLASQTLTKQAWAYYSSGANDEVTHRENHNAYHRIF-FK-PKILVDVRKVDISTDMLGSHVDVPFYVSATALCK 201 (511)
T ss_dssp SHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGCE-EC-CCCSCCCSSCBCCEEETTEEESSSEEECCCSCGG
T ss_pred CHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHC-CC-CCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHCC
T ss_conf 889999999854998774310678773157898998741211-56-4013576566674010783688874765602204
Q ss_pred CC-H-HHHHHHHHHHHH--CCCCEECCCC-CCCCCCCCCCC-CCCCCHHHHHEEECCCCC-CCCCHHHHCCC-----HHH
Q ss_conf 74-9-999999999997--0996321699-99923657678-999841343123214488-67795643471-----267
Q 000266 1021 IS-L-EAHTTLATAMNK--IGGKSNTGEG-GEQPSRMEPLS-DGSMNPKRSAIKQVASGR-FGVSSYYLTNA-----DEL 1088 (1760)
Q Consensus 1021 ls-~-ea~~aLA~Aa~~--~G~~s~sGeG-g~~~e~~~~~~-~g~~~~~~s~IkQvasgr-FGvt~~~L~~a-----~~i 1088 (1760)
+. + +++.++|++|.+ .|+.++.++. ..+.+++.... .+ ....++|++.++ .......+..+ ++|
T Consensus 202 l~~~~~~e~alaraA~~~~~G~~~~~s~~a~~s~e~v~~~~~~~----~~~~~~QLy~~~d~~~~~~~~~rae~aG~~al 277 (511)
T 1kbi_A 202 LGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSD----KQIQWYQLYVNSDRKITDDLVKNVEKLGVKAL 277 (511)
T ss_dssp GTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSCHHHHHHTCCCS----SCCEEEEECCCSSHHHHHHHHHHHHHHTCSCE
T ss_pred CCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCCC----CCCEEEEEEECCCHHHHHHHHHHHHHCCCCEE
T ss_conf 65802479999999787679924980776337899999634788----88748998636988999999999998599989
Q ss_pred HHHHHCCCCCCC-------CCCCCCCCCHHHHHHHHC--CCCCCC---CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCE
Q ss_conf 776630578898-------898787542189998808--988633---33899999999999899999999973999926
Q 000266 1089 QIKMAQGAKPGE-------GGELPGHKVIGDIAVTRN--STAGVG---LISPPPHHDIYSIEDLAQLIYDLKNANPGARI 1156 (1760)
Q Consensus 1089 eIKiaQGAKpG~-------GG~Lpg~kv~~~IA~~r~--~~~G~~---lisP~~h~diySiEdL~qlI~~Lr~~~p~~pI 1156 (1760)
.|++.-. ..|. |-.+|..++.. ..+ ...+.. +++...++++ +++ .|.++|+.+ +.||
T Consensus 278 ~itvd~p-~~g~R~~~~r~g~~~p~~~~~~----~~g~~~~~~~g~~~~~~~~~d~~~-~~~----~i~~lr~~~-~~Pv 346 (511)
T 1kbi_A 278 FVTVDAP-SLGQREKDMKLKFSNTKAGPKA----MKKTNVEESQGASRALSKFIDPSL-TWK----DIEELKKKT-KLPI 346 (511)
T ss_dssp EEECSCS-SCCCCHHHHHHHHTTCC-----------CCCCSSCCCGGGGCBTTBCTTC-CHH----HHHHHHHHC-SSCE
T ss_pred EEECCCC-CCCCCHHHHHCCCCCCCCCCCC----CCCCCCCCCCCHHHHHHHCCCHHH-HHH----HHHHHHHHH-CCCE
T ss_conf 9968888-7664178785267787533322----245666554207888753048075-799----999999974-9827
Q ss_pred EEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCH
Q ss_conf 89981136889999999984997999923999989985222124688889999999999884799984099986986799
Q 000266 1157 SVKLVSEAGVGVIASGVVKGHADHVLISGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTILQTDGQLKTG 1236 (1760)
Q Consensus 1157 ~VKlv~~~Gig~vA~~aakaGAD~IvIsG~~GGTGaa~~~si~~~GlP~~~~L~ev~q~L~~~glr~rV~IiadGGIrtG 1236 (1760)
+||++.. ...|..+.++|+|+|+|+||+| + ..+.+.|+...|+++.+.+...+++++++||++|||++|
T Consensus 347 ivKgv~~---~e~A~~a~~aGad~I~vs~hgG-~-------~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g 415 (511)
T 1kbi_A 347 VIKGVQR---TEDVIKAAEIGVSGVVLSNHGG-R-------QLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRG 415 (511)
T ss_dssp EEEEECS---HHHHHHHHHTTCSEEEECCTTT-T-------SSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSH
T ss_pred EEEECCC---HHHHHHHHHCCCCEEEECCCCC-C-------CCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCH
T ss_conf 9980798---9999999982998799838997-6-------677887639999999999875256798189997999989
Q ss_pred HHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999199811235167998301001134359898732213935674208989999999999999999999952998
Q 000266 1237 RDVAIAALLGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFMLAEELREIMSQLGFR 1316 (1760)
Q Consensus 1237 ~DV~KALaLGAdaVgiGta~L~algc~~~r~c~~~~cp~giatqdp~lr~~~~g~~e~V~n~l~~l~~ELr~~Ma~lG~~ 1316 (1760)
.||+|||+|||++|++||++|++++|. ++++|.+++..+.+||+..|+.+|++
T Consensus 416 ~Dv~kaLalGAdaV~iGr~~l~~~~~~---------------------------G~~gv~~~l~~l~~el~~~m~~~G~~ 468 (511)
T 1kbi_A 416 TDVLKALCLGAKGVGLGRPFLYANSCY---------------------------GRNGVEKAIEILRDEIEMSMRLLGVT 468 (511)
T ss_dssp HHHHHHHHHTCSEEEECHHHHHHHHHH---------------------------HHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHCCCCEEEECHHHHHHHHHC---------------------------CHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999980999899889999987744---------------------------71889999999999999999972877
Q ss_pred CHHHHCCCCCE
Q ss_conf 83332089741
Q 000266 1317 TITEMIGRSDM 1327 (1760)
Q Consensus 1317 si~elvgr~dl 1327 (1760)
++.|| .+..+
T Consensus 469 ~i~el-~~~~l 478 (511)
T 1kbi_A 469 SIAEL-KPDLL 478 (511)
T ss_dssp BGGGC-CGGGE
T ss_pred CHHHH-HHHHH
T ss_conf 49999-69871
No 8
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=1.00 E-value=1 Score=256.11 Aligned_cols=320 Identities=15% Similarity=0.144 Sum_probs=227.6
Q ss_pred HHHHHHHHHHHCC-CHHHHHHHHHHHHHCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-----CEEECCCCCC
Q ss_conf 9999999999139-9899999999976002----6754334334456789999888777333346-----4474579843
Q 000266 950 LAIAKLQEAARGN-SVAAYKEYSKRIQELN----KTCNLRGLLKFKEADVKIPLEEVEPASEIVK-----RFCTGAMSYG 1019 (1760)
Q Consensus 950 ~~i~~lq~a~~~~-~~~~~~~y~~~~~~~~----~~~~~r~ll~~~~~~~~i~~~~Ve~~t~i~~-----Pf~isaMS~G 1019 (1760)
..+.-+++.+|.. +...|.||...+.++. |...+.++. |+ ++...+++++|++++|++ ||+++||+++
T Consensus 14 ~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~-l~-pr~L~~~~~~d~st~i~G~~l~~Pi~iAPma~~ 91 (368)
T 2nli_A 14 VNTYDLEEEASKVVPHGGFNYIAGASGDEWTKRANDRAWKHKL-LY-PRLAQDVEAPDTSTEILGHKIKAPFIMAPIAAH 91 (368)
T ss_dssp SCSHHHHHHHHTTSCHHHHHHHHCCSBTSHHHHHHHHGGGGEE-EC-CCCCCCCSCCCCCEEETTEEESSSEEECCCSCG
T ss_pred CCHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHEE-EE-CCCCCCCCCCCCCEEECCEECCCCEEECCHHHC
T ss_conf 9999999999986798787532667875478999999875025-54-323588766776247898766886053635430
Q ss_pred CC-CHHHHHHHHHHHHHCCCCEECCCCC-CCCCCCCCC-CCCCCCHHHHHEEECCC-CCCCCCHHHHCCCHH-----HHH
Q ss_conf 47-4999999999999709963216999-992365767-89998413431232144-886779564347126-----777
Q 000266 1020 SI-SLEAHTTLATAMNKIGGKSNTGEGG-EQPSRMEPL-SDGSMNPKRSAIKQVAS-GRFGVSSYYLTNADE-----LQI 1090 (1760)
Q Consensus 1020 sl-s~ea~~aLA~Aa~~~G~~s~sGeGg-~~~e~~~~~-~~g~~~~~~s~IkQvas-grFGvt~~~L~~a~~-----ieI 1090 (1760)
.+ .++++.++|++|.+.|+.++.++.+ .+.|++... ++ ...+.|++. ...+.+.+.+..+++ |.|
T Consensus 92 g~~~~~~e~~la~aa~~~G~~~~~s~~~s~~le~v~~~~~~------~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~i 165 (368)
T 2nli_A 92 GLAHTTKEAGTARAVSEFGTIMSISAYSGATFEEISEGLNG------GPRWFQIYMAKDDQQNRDILDEAKSDGATAIIL 165 (368)
T ss_dssp GGTCTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHHHTT------CCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEE
T ss_pred CCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHCCC------CCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 68784799999999998499988224475899999974779------977999953588789999999999779989998
Q ss_pred HHH---CCCCCCC---CCCCCCC-CCHHHHHHHHCCCCCCCC--CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 663---0578898---8987875-421899988089886333--389999999999989999999997399992689981
Q 000266 1091 KMA---QGAKPGE---GGELPGH-KVIGDIAVTRNSTAGVGL--ISPPPHHDIYSIEDLAQLIYDLKNANPGARISVKLV 1161 (1760)
Q Consensus 1091 Kia---QGAKpG~---GG~Lpg~-kv~~~IA~~r~~~~G~~l--isP~~h~diySiEdL~qlI~~Lr~~~p~~pI~VKlv 1161 (1760)
.++ +|.++-. +-++|.. ++.. ...+....|..+ +++..++++ ++++ |.++|+.+ +.||+||++
T Consensus 166 t~d~p~~g~r~~d~~~~~~~p~~~~~~~--~~~~~~~~g~~l~~~~~~~d~~~-~~~~----i~~lr~~~-~~PvivK~v 237 (368)
T 2nli_A 166 TADSTVSGNRDRDVKNKFVYPFGMPIVQ--RYLRGTAEGMSLNNIYGASKQKI-SPRD----IEEIAGHS-GLPVFVKGI 237 (368)
T ss_dssp ESBCC---CBC--------CCSCCHHHH--HHHTTSGGGC-----CTTBCSBC-CHHH----HHHHHHHS-SSCEEEEEE
T ss_pred CCCCCCCCCHHHHHHHCCCCCCHHHHHH--CCCCCCCCCCHHHHHHHCCCCHH-HHHH----HHHHHHHC-CCCEEEECC
T ss_conf 3899864540677750334763166663--11246778710776642258333-6999----99999972-998899758
Q ss_pred CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHH
Q ss_conf 13688999999998499799992399998998522212468888999999999988479998409998698679999999
Q 000266 1162 SEAGVGVIASGVVKGHADHVLISGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTILQTDGQLKTGRDVAI 1241 (1760)
Q Consensus 1162 ~~~Gig~vA~~aakaGAD~IvIsG~~GGTGaa~~~si~~~GlP~~~~L~ev~q~L~~~glr~rV~IiadGGIrtG~DV~K 1241 (1760)
.. ...|..+.++|+|+|+|+||+|+. .++|+|+...|+++++.+ .++++||++|||++|.|++|
T Consensus 238 ~~---~e~a~~a~~~Gad~I~vs~~ggr~--------~~~g~~~~~~l~~v~~~v-----~~~ipVia~GGI~~g~D~~k 301 (368)
T 2nli_A 238 QH---PEDADMAIKRGASGIWVSNHGARQ--------LYEAPGSFDTLPAIAERV-----NKRVPIVFDSGVRRGEHVAK 301 (368)
T ss_dssp CS---HHHHHHHHHTTCSEEEECCGGGTS--------CSSCCCHHHHHHHHHHHH-----TTSSCEEECSSCCSHHHHHH
T ss_pred CC---HHHHHHHHHCCCCEEEECCCCCCC--------CCCCCCHHHHHHHHHHHH-----CCCCEEEEECCCCCHHHHHH
T ss_conf 97---999999997699899982898677--------888878599999999983-----79986999799999999999
Q ss_pred HHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 99919981123516799830100113435989873221393567420898999999999999999999995299883332
Q 000266 1242 AALLGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFMLAEELREIMSQLGFRTITEM 1321 (1760)
Q Consensus 1242 ALaLGAdaVgiGta~L~algc~~~r~c~~~~cp~giatqdp~lr~~~~g~~e~V~n~l~~l~~ELr~~Ma~lG~~si~el 1321 (1760)
+++|||++|++||++|++++|. ++++|.+++..+.+|++..|+.+|++++.|+
T Consensus 302 alalGAd~V~iGr~~l~~~~~~---------------------------G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l 354 (368)
T 2nli_A 302 ALASGADVVALGRPVLFGLALG---------------------------GWQGAYSVLDYFQKDLTRVMQLTGSQNVEDL 354 (368)
T ss_dssp HHHTTCSEEEECHHHHHHHHHH---------------------------HHHHHHHHHHHHHHHHHHHHHHHTCSSHHHH
T ss_pred HHHCCCCEEEECHHHHHHHHHC---------------------------CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 9983999999989999988751---------------------------7588999999999999999998587679896
Q ss_pred CCCCCEEE
Q ss_conf 08974132
Q 000266 1322 IGRSDMLE 1329 (1760)
Q Consensus 1322 vgr~dll~ 1329 (1760)
.+..+..
T Consensus 355 -~~~~l~~ 361 (368)
T 2nli_A 355 -KGLDLFD 361 (368)
T ss_dssp -HTCCEEE
T ss_pred -CCCCEEE
T ss_conf -5160862
No 9
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=1.00 E-value=1 Score=247.66 Aligned_cols=208 Identities=19% Similarity=0.160 Sum_probs=156.6
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC-CCEE-EEECCCCHHCHHHHHCCCCCCCCCCCCEEEEEECCCCCCCC
Q ss_conf 899999999999998431015999838999956-8808-99821151101001001479988651189985214579999
Q 000266 260 QMYILRRVSMAAIRESLNLEHGGAKDFYICSLS-SRTV-VYKGQLKPIQMKDYYYADLGNERFTSYMALIHSRFSTNTFP 337 (1760)
Q Consensus 260 ~Ly~lRk~~e~~i~~~~~~~~~~~~~~yI~Sls-~~ti-VyKG~g~~~qv~~~y~~DL~d~~~~s~~ai~H~RySTNt~p 337 (1760)
.+|.....+ .|+. .+.++|++.+ +..+ ++|++|++.++|.... + ..+.++++|+|+||||++.+
T Consensus 15 ~l~~~l~~L----qhRG------~D~aGi~~~~~~~~~~~~k~~g~v~~vf~~~~--~--~~l~g~~~igH~R~sT~G~~ 80 (504)
T 1ecf_A 15 SIYDALTVL----QHRG------QDAAGIITIDANNCFRLRKANGLVSDVFEARH--M--QRLQGNMGIGHVRYPTAGSS 80 (504)
T ss_dssp HHHHHHHHT----GGGC------CSEEEEEEECTTSCEEEEEEESCHHHHCCHHH--H--HHCCSSEEEEEEECCBTTBC
T ss_pred HHHHHHHHH----HHCC------CCCCEEEEECCCCCEEEEECCCCHHHHCCCCC--C--CCCCCCEEEEEECCCCCCCC
T ss_conf 999999999----8549------98432999849980999916885654137122--1--34788789999735768999
Q ss_pred CCCCCCCCE-------EEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH-
Q ss_conf 989898741-------020045555806679999973021110124884788852169558999967999999999999-
Q 000266 338 SWDRAQPMR-------ILGHNGEINTLRGNVNWMKAREGLLKCKELGLSKDEMKKLLPIVDVSSSDSGAFDGVLELLVR- 409 (1760)
Q Consensus 338 sw~~AQPfr-------~laHNGEInt~~gN~n~m~are~~~~s~~~g~~~~~l~~~~pi~~~~~SDSe~ld~~le~l~~- 409 (1760)
+|.++|||. .++|||||+|+..+++.+. ..+...+.+.||||++.++++....
T Consensus 81 ~~~n~QP~~~~~~~~~~l~hNG~i~N~~eLr~~L~-------------------~~g~~~f~s~sDsEvi~~l~~~~~~~ 141 (504)
T 1ecf_A 81 SASEAQPFYVNSPYGITLAHNGNLTNAHELRKKLF-------------------EEKRRHINTTSDSEILLNIFASELDN 141 (504)
T ss_dssp TTSCCSCEEECSSSCEEEEEEEEETTHHHHHHHHH-------------------HHHCCCCCSSCHHHHHHHHHHHHHTT
T ss_pred CCCCCCCEEECCCCCEEEEEEEEECCHHHHHHHHH-------------------HHCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 85566985851689899999642469999999998-------------------60788777898899999999998874
Q ss_pred CCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEE-CCCCEEEECCCCCCCCCCEEEEEE---C--
Q ss_conf 1999999998708533114788998889999997711677998708994-079569980698999774289984---9--
Q 000266 410 AGRSLPEAVMMMIPEAWQNDKNMDPQRKALYEYFSALMEPWDGPALISF-TDGRYLGATLDRNGLRPGRFYITH---S-- 483 (1760)
Q Consensus 410 ~g~sl~eAi~~~iPeaw~~~~~m~~e~rafyey~~~~mepwdGPa~iv~-tdg~~iga~lDrnGLRPlr~~~t~---d-- 483 (1760)
.|. +.+...++++....+++.|+|+|++++ +++..+.++|||+|+||| |++.. +
T Consensus 142 ~g~-------------------~~~~~~~~~~a~~~~~~~l~G~fa~v~~~~~~~l~a~RD~~GirPL-~~g~~~~~~g~ 201 (504)
T 1ecf_A 142 FRH-------------------YPLEADNIFAAIAATNRLIRGAYACVAMIIGHGMVAFRDPNGIRPL-VLGKRDIDENR 201 (504)
T ss_dssp CCS-------------------SSCCHHHHHHHHHHHHHHCCEEEEEEEEETTTEEEEEECTTCCSCC-EEEEEECSSSC
T ss_pred CCC-------------------CCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCCCE-EEEECCCCCCC
T ss_conf 333-------------------4666336999999856533764237899749828999888999854-88620368885
Q ss_pred CEEEEEECCCCCCCCCCCEEECCCCCCCCEEEEECCCCE
Q ss_conf 999999336544589984777165689929999849977
Q 000266 484 GRVIMASEVGVVDIPPEDVLRKGRLNPGMMLLVDFEKRI 522 (1760)
Q Consensus 484 ~~~i~ASE~gaidi~~~~v~~kg~l~PGemi~vd~~~g~ 522 (1760)
+.+++|||+++++..+.+.++ +|.|||++.++.++..
T Consensus 202 ~~~~~ASE~~al~~~~~~~v~--~l~PGe~v~i~~~g~~ 238 (504)
T 1ecf_A 202 TEYMVASESVALDTLGFDFLR--DVAPGEAIYITEEGQL 238 (504)
T ss_dssp EEEEEESSTHHHHHHTCEEEE--ECCTTEEEEEETTCCE
T ss_pred EEEEEEECCHHHHCCCCCEEE--ECCCCEEEEEECCCCE
T ss_conf 389999373686366860899--9899819999589850
No 10
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=1.00 E-value=1 Score=239.72 Aligned_cols=182 Identities=22% Similarity=0.265 Sum_probs=149.3
Q ss_pred CCEEEEEECCCEE-EEECCCCHHCHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEE---------EECCCC
Q ss_conf 8389999568808-998211511010010014799886511899852145799999898987410---------200455
Q 000266 284 KDFYICSLSSRTV-VYKGQLKPIQMKDYYYADLGNERFTSYMALIHSRFSTNTFPSWDRAQPMRI---------LGHNGE 353 (1760)
Q Consensus 284 ~~~yI~Sls~~ti-VyKG~g~~~qv~~~y~~DL~d~~~~s~~ai~H~RySTNt~psw~~AQPfr~---------laHNGE 353 (1760)
+.++|+..++..+ +||++|++.+++... +| ..+.++++|+|+||||++.++|.++|||.. ++||||
T Consensus 29 D~~Gi~~~~~~~~~~~k~~g~v~~~~~~~--~l--~~l~g~~~igH~R~at~g~~~~~n~qP~~~~~~~~g~~~l~hNG~ 104 (459)
T 1ao0_A 29 EGAGIVATDGEKLTAHKGQGLITEVFQNG--EL--SKVKGKGAIGHVRYATAGGGGYENVQPLLFRSQNNGSLALAHNGN 104 (459)
T ss_dssp SEEEEEEECSSCEEEEEEESCHHHHTTSS--CT--TTCCBSEEEEEEECCC----CGGGSSSEEEBCTTTCCEEEEEEEE
T ss_pred CCCCEEEEECCEEEEEECCCCHHHHCCHH--HH--HCCCCCEEEEEEECCCCCCCCCCCCCCCEECCCCCCCEEEEEEEE
T ss_conf 85878998099489996687376523522--34--116877899999457789988667799463137888699999999
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC-CCHHHHHHHCCCCCCCCCCCC
Q ss_conf 5580667999997302111012488478885216955899996799999999999919-999999987085331147889
Q 000266 354 INTLRGNVNWMKAREGLLKCKELGLSKDEMKKLLPIVDVSSSDSGAFDGVLELLVRAG-RSLPEAVMMMIPEAWQNDKNM 432 (1760)
Q Consensus 354 Int~~gN~n~m~are~~~~s~~~g~~~~~l~~~~pi~~~~~SDSe~ld~~le~l~~~g-~sl~eAi~~~iPeaw~~~~~m 432 (1760)
|+|+..+++.+.. .+. .+.+.||||++.++++ +.+ .++.+++..
T Consensus 105 I~N~~~Lr~~L~~-------------------~g~-~f~~~sDsEvi~~l~~---~~~~~~~~~a~~~------------ 149 (459)
T 1ao0_A 105 LVNATQLKQQLEN-------------------QGS-IFQTSSDTEVLAHLIK---RSGHFTLKDQIKN------------ 149 (459)
T ss_dssp ETTHHHHHHHHHH-------------------TTC-CCCSSCHHHHHHHHHH---TCCCSSHHHHHHH------------
T ss_pred ECCHHHHHHHHHH-------------------CCC-CCCCCCHHHHHHHHHH---HHCCCCHHHHHHH------------
T ss_conf 6288999999985-------------------698-6778988999999999---7545889999999------------
Q ss_pred CHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEECCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCEEECCCCCCCC
Q ss_conf 98889999997711677998708994079569980698999774289984999999933654458998477716568992
Q 000266 433 DPQRKALYEYFSALMEPWDGPALISFTDGRYLGATLDRNGLRPGRFYITHSGRVIMASEVGVVDIPPEDVLRKGRLNPGM 512 (1760)
Q Consensus 433 ~~e~rafyey~~~~mepwdGPa~iv~tdg~~iga~lDrnGLRPlr~~~t~d~~~i~ASE~gaidi~~~~v~~kg~l~PGe 512 (1760)
.++.|+|+|++++.|++.+.++|||+|+||| |++..++.+++|||.++++..+.+.++ +|.||+
T Consensus 150 -------------~~~~l~G~fa~~i~d~~~l~~~RD~~G~rPL-~~~~~~~~~~~ASE~~al~~~~~~~i~--~l~pG~ 213 (459)
T 1ao0_A 150 -------------SLSMLKGAYAFLIMTETEMIVALDPNGLRPL-SIGMMGDAYVVASETCAFDVVGATYLR--EVEPGE 213 (459)
T ss_dssp -------------HHTTCCEEEEEEEECSSEEEEEECTTCCSCC-EEEEETTEEEEESSTHHHHHHTCEEEE--ECCTTE
T ss_pred -------------HHHHHCCCEEEEEEECCEEEEEECCCCCCCE-EEEECCCEEEEEECCHHHHCCCCCEEE--EECCCE
T ss_conf -------------9986163048999729999999888899975-898519999999785687467874599--979897
Q ss_pred EEEEECCC
Q ss_conf 99998499
Q 000266 513 MLLVDFEK 520 (1760)
Q Consensus 513 mi~vd~~~ 520 (1760)
++.++.++
T Consensus 214 ~~~i~~~~ 221 (459)
T 1ao0_A 214 MLIINDEG 221 (459)
T ss_dssp EEEEETTE
T ss_pred EEEEECCC
T ss_conf 99997894
Done!