RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= 000266
(1760 letters)
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur
flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum
brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Length = 1479
Score = 2658 bits (6892), Expect = 0.0
Identities = 664/1532 (43%), Positives = 927/1532 (60%), Gaps = 55/1532 (3%)
Query: 115 CGVGFVAELSGESSRKTITDALEMLVRMAHRGACGCETNTGDGAGILVALPHDFFKEAAK 174
CGVGF+A + G+ R + +E L + HRGA + TGDGAGI VA+P FFK+ K
Sbjct: 1 CGVGFIAAIDGKPRRSVVEKGIEALKAVWHRGAVDADGKTGDGAGIHVAVPQKFFKDHVK 60
Query: 175 NVGFQLPPPGEYAVGMFFLPQSE-NRREESKKVFTKVAESLGHTVLGWRAVPTDNSGLGN 233
+G + P + AVG FLP+ + +E + + + G+ + GWR VP + +G
Sbjct: 61 VIGHRAPD-NKLAVGQVFLPRISLDAQEACRCIVETEILAFGYYIYGWRQVPINVDIIGE 119
Query: 234 SALQTEPVVEQVFLT-PSLRSKVDFENQMYILRRVSMAAIRESLNLEHGGAKDFYICSLS 292
A T P +EQ+ + S FE +YI+RR A++ DFYICSLS
Sbjct: 120 KANATRPEIEQIIVGNNKGVSDEQFELDLYIIRRRIEKAVKGE------QINDFYICSLS 173
Query: 293 SRTVVYKGQLKPIQMKDYYYADLGNERFTSYMALIHSRFSTNTFPSWDRAQPMRILGHNG 352
+R+++YKG Q+ +Y DL +ERF S A+ H R+STNTFP+W AQP R+L HNG
Sbjct: 174 ARSIIYKGMFLAEQLTTFY-PDLLDERFESDFAIYHQRYSTNTFPTWPLAQPFRMLAHNG 232
Query: 353 EINTLRGNVNWMKAREGLLKCKELGLSKDEMKKLLPIVDVSSSDSGAFDGVLELLVRAGR 412
EINT++GNVNWMKA E ++ G M+ L P++ V SDSG+ D V E++VRAGR
Sbjct: 233 EINTVKGNVNWMKAHETRMEHPAFG---THMQDLKPVIGVGLSDSGSLDTVFEVMVRAGR 289
Query: 413 SLPEAVMMMIPEAWQNDKNMDPQRKALYEYFSALMEPWDGPALISFTDGRYLGATLDRNG 472
+ P MM++P+A + + KAL +Y +++MEPWDGPA ++ TDGR++ +DRNG
Sbjct: 290 TAPMVKMMLVPQALTSSQTTPDNHKALIQYCNSVMEPWDGPAALAMTDGRWVVGGMDRNG 349
Query: 473 LRPGRFYITHSGRVIMASEVGVVDIPPEDVLRKGRLNPGMMLLVDFEKRIVVDDEALKQQ 532
LRP R+ IT G +I SE G+V I V+ KGRL PG M+ VD + + D LK
Sbjct: 350 LRPMRYTITTDGLIIGGSETGMVKIDETQVIEKGRLGPGEMIAVDLQSGKLYRDRELKDH 409
Query: 533 YSLARPYGEWLQRQKIELKNIVESIHKSERVSPGIAGVLPASNDDDNMENMGIHGLLAPL 592
+ +P+ +W+Q L +V++ P+ D L
Sbjct: 410 LATLKPWDKWVQNT-THLDELVKTASLKGE---------PSDMDKAE--------LRRRQ 451
Query: 593 KAFGYTVEALEMLMLPMAKDGTEALGSMGNDAPLAVMSNREKLTFEYFKQMFAQVTNPPI 652
+AFG T+E +E+++ PM +DG EA+GSMG+D+P+AV+S++ + +F+Q F+QVTNPPI
Sbjct: 452 QAFGLTMEDMELILHPMVEDGKEAIGSMGDDSPIAVLSDKYRGLHHFFRQNFSQVTNPPI 511
Query: 653 DPIREKIVTSMECMIGPEGVLTETTEEQCHRLSLKGPLLSIEEMEAIKRMNYRGWRSKVL 712
D +RE+ V S++ +G G + + E Q L L+ P+L+ E A++ +Y G + +
Sbjct: 512 DSLRERRVMSLKTRLGNLGNILDEDETQTRLLQLESPVLTTAEFRAMR--DYMGDTAAEI 569
Query: 713 DITYSKDHGRRGLEETLDRICAEARDAIKEGYTLLVLSDRAFSSKRVAVSSLLAVGAVHH 772
D T+ D G L + L RI E DA++ G T ++L+D A R A+ ++LA GAVH
Sbjct: 570 DATFPVDGGPEALRDALRRIRQETEDAVRGGATHVILTDEAMGPARAAIPAILATGAVHT 629
Query: 773 HLVKNLERTRIGLIVESAEPREVHHFCTLVGFGADAICPYLATEAIWRLQVDGKIPPKAS 832
HL+++ RT L V +AE + H+F L+G GA + YLA EAI G
Sbjct: 630 HLIRSNLRTFTSLNVRTAEGLDTHYFAVLIGVGATTVNAYLAQEAIAERHRRGLFGSM-- 687
Query: 833 GEFHSKDELVKKYFKASNYGMMKVLAKMGISTLASYKGAQIFEALGLSSEVIEKCFAGTP 892
++ + Y KA + G++K+++KMGIS ++SY+G FEA+GLS ++ + F
Sbjct: 688 ----PLEKGMANYKKAIDDGLLKIMSKMGISVISSYRGGGNFEAIGLSRALVAEHFPAMV 743
Query: 893 SRVDGATFEVLASDALHLHELAFPTRILPPGSAEAVALPNPGDYHWRKGGEIHLNDPLAI 952
SR+ G + L H A+ VALP G Y +RK G+ H + I
Sbjct: 744 SRISGIGLNGIQKKVLEQHATAYNEE--------VVALPVGGFYRFRKSGDRHGWEGGVI 795
Query: 953 AKLQEAARGNSVAAYKEYSKRIQELNKTCNLRGLLKFKEADVKIPLEEVEPASEIVKRFC 1012
LQ+A +S +K+YS+++ + LR LL+ + +P++EVE + I KRF
Sbjct: 796 HTLQQAVTNDSYTTFKKYSEQVNK-RPPMQLRDLLELRSTKAPVPVDEVESITAIRKRFI 854
Query: 1013 TGAMSYGSISLEAHTTLATAMNKIGGKSNTGEGGEQPSRMEPLSDGSMNPKRSAIKQVAS 1072
T MS G++S EAH TL AMN+IG KS++GEGGE P+R P +G + SAIKQVAS
Sbjct: 855 TPGMSMGALSPEAHGTLNVAMNRIGAKSDSGEGGEDPARFRPDKNG--DNWNSAIKQVAS 912
Query: 1073 GRFGVSSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDIAVTRNSTAGVGLISPPPHH 1132
GRFGV++ YL EL+IK+AQGAKPGEGG+LPG KV IA R+ST GV LISPPPHH
Sbjct: 913 GRFGVTAEYLNQCRELEIKVAQGAKPGEGGQLPGFKVTEMIARLRHSTPGVMLISPPPHH 972
Query: 1133 DIYSIEDLAQLIYDLKNANPGARISVKLVSEAGVGVIASGVVKGHADHVLISGHDGGTGA 1192
DIYSIEDLAQLIYDLK NP A+++VKLVS +G+G IA+GV K +AD +LISG+ GGTGA
Sbjct: 973 DIYSIEDLAQLIYDLKQINPDAKVTVKLVSRSGIGTIAAGVAKANADIILISGNSGGTGA 1032
Query: 1193 SRWTGIKNAGLPWELGLAETHQTLVANDLRGRTILQTDGQLKTGRDVAIAALLGAEEFGF 1252
S T IK AGLPWE+GL+E HQ L N LR R L+TDG LKTGRD+ IAA+LGAEEFG
Sbjct: 1033 SPQTSIKFAGLPWEMGLSEVHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAMLGAEEFGI 1092
Query: 1253 STAPLITLGCIMMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFMLAEELREIMSQ 1312
TA LI +GCIM+R+CH NTCPVG+ QD LR+KF G PE V+N F LAEE+REI++
Sbjct: 1093 GTASLIAMGCIMVRQCHSNTCPVGVCVQDDKLRQKFVGTPEKVVNLFTFLAEEVREILAG 1152
Query: 1313 LGFRTITEMIGRSDMLEVDKEVTKTNEKLENIDLSLLLRPAADLRPEAAQYCVQKQDHGL 1372
LGFR++ E+IGR+D+L V++ E L+++DL+ L E A+YC + + +
Sbjct: 1153 LGFRSLNEVIGRTDLLHQ---VSRGAEHLDDLDLNPRLAQVD--PGENARYCTLQGRNEV 1207
Query: 1373 DMALDQKLIKLSKAALEKALPVYIETPVCNVNRAVGTMLSHEVTKRYHLVGLPADTIHIK 1432
LD +++ ++ E+ + + N RA+GT LS VT+++ + GL I I+
Sbjct: 1208 PDTLDARIVADARPLFEEGEKMQLAYNARNTQRAIGTRLSSMVTRKFGMFGLQPGHITIR 1267
Query: 1433 LTGSAGQSVGAFLCPGILLELEGDSNDYVGKGLSGGKIVAYPPKGSLFDPKVNIVIGNVA 1492
L G+AGQS+GAF GI LE+ GD+NDYVGKGLSGG IV P S + N +IGN
Sbjct: 1268 LRGTAGQSLGAFAVQGIKLEVMGDANDYVGKGLSGGTIVVRPTTSSPLETNKNTIIGNTV 1327
Query: 1493 LYGATSGEAYFNGMAAERFCVRNSGARAVVEGVGDHGCEYMTGGTVVVLGKTGRNFAAGM 1552
LYGAT+G+ + G A ERF VRNSGA VVEG G +GCEYMTGGT V+LG+ G NFAAGM
Sbjct: 1328 LYGATAGKLFAAGQAGERFAVRNSGATVVVEGCGSNGCEYMTGGTAVILGRVGDNFAAGM 1387
Query: 1553 SGGIAYVLDVDGKFRSRCNPELVDLDKVEEEEDIITLRMMIQQHQRYTNSQLAKEVLADF 1612
+GG+AYV D+D N E V ++E L+ +I++H T S+ A E+L D+
Sbjct: 1388 TGGMAYVYDLDDSLPLYINDESVIFQRIEVGHYESQLKHLIEEHVTETQSRFAAEILNDW 1447
Query: 1613 ENLLPKFIKVFPRDYKRVLASMKVAAAQEAAE 1644
+ KF +V P++ L +AE
Sbjct: 1448 AREVTKFWQVVPKEMLNRLEVPVHLPKAISAE 1479
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex
enzyme, substrate channeling, amidotransferase,
flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A
{Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB:
1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Length = 1520
Score = 2612 bits (6773), Expect = 0.0
Identities = 672/1572 (42%), Positives = 922/1572 (58%), Gaps = 91/1572 (5%)
Query: 115 CGVGFVAELSGESSRKTITDALEMLVRMAHRGACGCETNTGDGAGILVALPHDFFKEAAK 174
CGVGF+A L G+ + AL+ L M HRG C + ++GDGAG++ A+P + +
Sbjct: 1 CGVGFIANLRGKPDHTLVEQALKALGCMEHRGGCSADNDSGDGAGVMTAIPRELLAQWFN 60
Query: 175 NVGFQLPPPGEYAVGMFFLPQSENRREESKKVFTKVAESLGHTVLGWRAVPTDNSGLGNS 234
+P VGM FLPQ + RE ++ +V TVLGWR VP ++ LG
Sbjct: 61 TRNLPMPDGDRLGVGMVFLPQEPSAREVARAYVEEVVRLEKLTVLGWREVPVNSDVLGIQ 120
Query: 235 ALQTEPVVEQVFLT-PSLRSKVDFENQMYILRRVSMAAIRESLNLEHGGAKDFYICSLSS 293
A +P +EQ+ +T P + + + ++YI R + + A+DFY+CS S
Sbjct: 121 AKNNQPHIEQILVTCPEGCAGDELDRRLYIARSI----------IGKKLAEDFYVCSFSC 170
Query: 294 RTVVYKGQLKPIQMKDYYYADLGNERFTSYMALIHSRFSTNTFPSWDRAQPMRILGHNGE 353
RT+VYKG ++ I + ++Y DL N +TS A+ H RFSTNT P W AQPMR+LGHNGE
Sbjct: 171 RTIVYKGMVRSIILGEFY-LDLKNPGYTSNFAVYHRRFSTNTMPKWPLAQPMRLLGHNGE 229
Query: 354 INTLRGNVNWMKAREGLLKCKELGLSKDEMKKLLPIVDVSSSDSGAFDGVLELLVRAGRS 413
INTL GN+NWM ARE L+ K E++ L PIV+ ++SDS D LELLVR GRS
Sbjct: 230 INTLLGNINWMAAREKELEVSGWT--KAELEALTPIVNQANSDSYNLDSALELLVRTGRS 287
Query: 414 LPEAVMMMIPEAWQNDKNMD--PQRKALYEYFSALMEPWDGPALISFTDGRYLGATLDRN 471
EA M+++PEA++N + P+ ++Y+S L EPWDGPAL+ F+DG+ +GA LDRN
Sbjct: 288 PLEAAMILVPEAYKNQPALKDYPEISDFHDYYSGLQEPWDGPALLVFSDGKIVGAGLDRN 347
Query: 472 GLRPGRFYITHSGRVIMASEVGVVDIPPEDVLRKGRLNPGMMLLVDFEKRIVVDDEALKQ 531
GLRP R+ IT +++ SE GVVD+P D++ KGRL PG M+ VD ++ ++ + +KQ
Sbjct: 348 GLRPARYCITKDDYIVLGSEAGVVDLPEVDIVEKGRLAPGQMIAVDLAEQKILKNYQIKQ 407
Query: 532 QYSLARPYGEWLQRQKIELKNIVESIHKSERVSPGIAGVLPASNDDDNMENMGIHGLLAP 591
Q + PYGEW++ Q+ + + + ND +L
Sbjct: 408 QAAQKYPYGEWIKIQRQTVASDSFAEK-------------TLFNDAQT--------VLQQ 446
Query: 592 LKAFGYTVEALEMLMLPMAKDGTEALGSMGNDAPLAVMSNREKLTFEYFKQMFAQVTNPP 651
AFGYT E +EM+++PMA G E MG+D PLAV+S++ +L ++YFKQ FAQVTNPP
Sbjct: 447 QAAFGYTAEDVEMVVVPMASQGKEPTFCMGDDTPLAVLSHKPRLLYDYFKQRFAQVTNPP 506
Query: 652 IDPIREKIVTSMECMIGPEGVLTETTEEQCHRLSLKGPLLSIEEMEAIKRMNYRGWRSKV 711
IDP+RE +V S+ +G G L E E + L+ PL++ E++AIK +
Sbjct: 507 IDPLRENLVMSLAMFLGKRGNLLEPKAESARTIKLRSPLVNEVELQAIKTG---QLQVAE 563
Query: 712 LDITYSKDHGRRGLEETLDRICAEARDAIKEGYTLLVLSDRA----FSSKRVAVSSLLAV 767
+ Y D G LE+ L + A ++ G +LVL+DR + + + LLAV
Sbjct: 564 VSTLYDLD-GVNSLEDALTNLVKTAIATVQAGAEILVLTDRPNGAILTENQSFIPPLLAV 622
Query: 768 GAVHHHLVKNLERTRIGLIVESAEPREVHHFCTLVGFGADAICPYLATEAIWRLQVDGKI 827
GAVHHHL++ R + LIV++A+ HHF LVG+GA AICPYLA E++ + +D K
Sbjct: 623 GAVHHHLIRAGLRLKASLIVDTAQCWSTHHFACLVGYGASAICPYLALESVRQWWLDEKT 682
Query: 828 PP-KASGEFH--SKDELVKKYFKASNYGMMKVLAKMGISTLASYKGAQIFEALGLSSEVI 884
+G +K Y ++ G+ K+L+KMGIS LASY GAQIFEA+GL +E++
Sbjct: 683 QKLMENGRLDRIDLPTALKNYRQSVEAGLFKILSKMGISLLASYHGAQIFEAIGLGAELV 742
Query: 885 EKCFAGTPSRVDGATFEVLASDALHLHELAFPTRILPPGSAEAVALPNPGDYHWRKGGEI 944
E FAGT SRV G T +A + + H +AFP A L N G ++R GGE
Sbjct: 743 EYAFAGTTSRVGGLTIADVAGEVMVFHGMAFPEM--------AKKLENFGFVNYRPGGEY 794
Query: 945 HLNDPLAIAKLQEAAR----------GNSVAAYKEYSKRIQELNKTCNLRGLLKFKEADV 994
H+N P L +A G + Y+ Y + +++ LR LL F
Sbjct: 795 HMNSPEMSKSLHKAVAAYKVGGNGNNGEAYDHYELYRQYLKD-RPVTALRDLLDFNADQP 853
Query: 995 KIPLEEVEPASEIVKRFCTGAMSYGSISLEAHTTLATAMNKIGGKSNTGEGGEQPSRMEP 1054
I LEEVE IVKRFCTG MS G++S EAH TLA AMN++G KSN+GEGGE R
Sbjct: 854 AISLEEVESVESIVKRFCTGGMSLGALSREAHETLAIAMNRLGAKSNSGEGGEDVVRYLT 913
Query: 1055 LSDGSMNP----------------KRSAIKQVASGRFGVSSYYLTNADELQIKMAQGAKP 1098
L D SAIKQ+ASGRFGV+ YL + +L+IKMAQGAKP
Sbjct: 914 LDDVDSEGNSPTLPHLHGLQNGDTANSAIKQIASGRFGVTPEYLMSGKQLEIKMAQGAKP 973
Query: 1099 GEGGELPGHKVIGDIAVTRNSTAGVGLISPPPHHDIYSIEDLAQLIYDLKNANPGARISV 1158
GEGG+LPG KV IA+ R S GV LISPPPHHDIYSIEDLAQLIYDL NP A++SV
Sbjct: 974 GEGGQLPGKKVSEYIAMLRRSKPGVTLISPPPHHDIYSIEDLAQLIYDLHQINPEAQVSV 1033
Query: 1159 KLVSEAGVGVIASGVVKGHADHVLISGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVA 1218
KLV+E G+G IA+GV K +AD + ISGHDGGTGAS + IK+AG PWELG+ E H+ L+
Sbjct: 1034 KLVAEIGIGTIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWELGVTEVHRVLME 1093
Query: 1219 NDLRGRTILQTDGQLKTGRDVAIAALLGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIA 1278
N LR R +L+ DG LKTG DV +AAL+GAEE+GF + +I GCIM R CH N CPVG+A
Sbjct: 1094 NQLRDRVLLRADGGLKTGWDVVMAALMGAEEYGFGSIAMIAEGCIMARVCHTNNCPVGVA 1153
Query: 1279 TQDPVLREKFAGEPEHVINFFFMLAEELREIMSQLGFRTITEMIGRSDMLEVDKEVTKTN 1338
TQ LR++F G P V+NFF+ +AEE+R +++ LG+R++ ++IGR+D+L+V +V
Sbjct: 1154 TQQERLRQRFKGVPGQVVNFFYFIAEEVRSLLAHLGYRSLDDIIGRTDLLKVRSDV--QL 1211
Query: 1339 EKLENIDLSLLLRPAADLRPEAAQYCVQKQDHGLDMALDQKLIKLS--KAALEKALPVYI 1396
K +N+ L LL + Q+ + H LD ++ + A+
Sbjct: 1212 SKTQNLTLDCLLNLPD--TKQNRQWLNHEPVHSNGPVLDDDILADPDIQEAINHQTTATK 1269
Query: 1397 ETPVCNVNRAVGTMLSHEVTKRYHLVGLPADTIHIKLTGSAGQSVGAFLCPGILLELEGD 1456
+ N +R VGT LS + K+Y G I + G+AGQS GAF G+ L L+G+
Sbjct: 1270 TYRLVNTDRTVGTRLSGAIAKKYGNNGFE-GNITLNFQGAAGQSFGAFNLDGMTLHLQGE 1328
Query: 1457 SNDYVGKGLSGGKIVAYPPKGSLFDPKVNIVIGNVALYGATSGEAYFNGMAAERFCVRNS 1516
+NDYVGKG++GG+IV P + F P+ N++IGN LYGAT G Y NG A ERF VRNS
Sbjct: 1329 ANDYVGKGMNGGEIVIVPHPQASFAPEDNVIIGNTCLYGATGGNLYANGRAGERFAVRNS 1388
Query: 1517 GARAVVEGVGDHGCEYMTGGTVVVLGKTGRNFAAGMSGGIAYVLDVDGKFRSRCNPELVD 1576
+AV+EG GDH CEYMTGG +VVLG GRN AGM+GG+AY LD G + NPE++
Sbjct: 1389 VGKAVIEGAGDHCCEYMTGGVIVVLGPVGRNVGAGMTGGLAYFLDEVGDLPEKINPEIIT 1448
Query: 1577 LDKVEEEEDIITLRMMIQQHQRYTNSQLAKEVLADFENLLPKFIKVFPRDYKRVLASMKV 1636
L ++ + L+ +I H +T S K +LA++ + L KF + P K +
Sbjct: 1449 LQRITASKGEEQLKSLITAHVEHTGSPKGKAILANWSDYLGKFWQAVPPSEKDSPEANND 1508
Query: 1637 AAAQ-EAAEDAV 1647
+ E +V
Sbjct: 1509 VSLTGEKTLTSV 1520
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 73.0 bits (178), Expect = 8e-13
Identities = 85/645 (13%), Positives = 179/645 (27%), Gaps = 199/645 (30%)
Query: 485 RVIMASEVGVVDIPPEDVLRKGRLNPGMMLLVDFEKRIVVD--DEALKQQYS-LARPY-G 540
++ E+ + + + V RL L+ ++ +V +E L+ Y L P
Sbjct: 44 SILSKEEIDHIIMSKDAVSGTLRL---FWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKT 100
Query: 541 EWLQRQKIE---------LKNIVESIHKS--ERVSPGIAGVLPASNDDDNMENMGIHGLL 589
E Q + L N + K R+ P + A + +N+ I G+
Sbjct: 101 EQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQP-YLKLRQALLELRPAKNVLIDGV- 158
Query: 590 APLKAFGYTVEALEMLMLPMAKDGTEALG------SMGN-DAPLAVMSNREKLTFEYFKQ 642
G T AL++ + + + ++ N ++P V+ +KL ++
Sbjct: 159 ---LGSGKTWVALDVCL---SYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQ-IDP 211
Query: 643 MFAQVTNPPIDPIREKIVTSMECMIGPEGVLTETTEEQCHRL----SLKGPLL---SIEE 695
+ ++ + + + + RL + LL +++
Sbjct: 212 NWTSRSDHSSNIKLR----------------IHSIQAELRRLLKSKPYENCLLVLLNVQN 255
Query: 696 MEAIKRMNYRGWRSKVLDITYSKDHGRRGLEETLDRICAEARDAIKEGYTLLVLSDRAFS 755
+A N K+L +T T + + A + L +
Sbjct: 256 AKAWNAFNLS---CKIL-LT------------TRFKQVTDFLSAATTTHISLDHHSMTLT 299
Query: 756 SKRVAVSSLLAVGAVHHHLVKNLERTRIGLIVESAEPREVHHFCTLVGFGADAICPYLAT 815
V SLL K L+ PRE P
Sbjct: 300 PDEVK--SLLL---------KYLD------CRPQDLPRE-----------VLTTNP-RRL 330
Query: 816 EAIWRLQVDGKIPPKASGEFHSKDELVKKYFKASNYGMMKVLAKMGISTLASYKGAQIFE 875
I DG +K N + + + ++ L + ++F+
Sbjct: 331 SIIAESIRDGLATWD--------------NWKHVNCDKLTTIIESSLNVLEPAEYRKMFD 376
Query: 876 ALGL-------SSEVIEKCFAGTPSRVDGATFEVLASDAL----------HLHELAFPTR 918
L + + ++ + L +L + + +
Sbjct: 377 RLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELK 436
Query: 919 ILPPGSAEA----VA-------------LPNPGD--------YHWRKGG---------EI 944
+ V +P D +H + +
Sbjct: 437 VKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMV 496
Query: 945 HLNDPLAIAKLQEA-----ARG---NSVAAYKEYSKRIQELNKTCN---LRGLLKFKEAD 993
L+ K++ A G N++ K Y I + N + +L F
Sbjct: 497 FLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICD-NDPKYERLVNAILDF---- 551
Query: 994 VKIPLEEVE------PASEIVKRFCTGAMSY--GSISLEAHTTLA 1030
L ++E +++++ A+ +I EAH +
Sbjct: 552 ----LPKIEENLICSKYTDLLRI----ALMAEDEAIFEEAHKQVQ 588
Score = 63.7 bits (154), Expect = 5e-10
Identities = 62/432 (14%), Positives = 114/432 (26%), Gaps = 119/432 (27%)
Query: 1370 HGLDMALDQKLIKLS-KAALEKALPVYIETPVCN-VNRAVGTMLSHEVTKRYHLVGLP-- 1425
H +D + + K L +++ C V ++LS E H++
Sbjct: 5 HHMDFETGE--HQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEID--HIIMSKDA 60
Query: 1426 ---ADTIHIKLTGSAGQSVGAFLCPGILLELEGDSNDYVGKGLSGGKIVAYPPKG----- 1477
+ L + V F+ E +Y I +
Sbjct: 61 VSGTLRLFWTLLSKQEEMVQKFV-------EEVLRINY---KFLMSPI-KTEQRQPSMMT 109
Query: 1478 SLFDPKVNIVIGNVAL---YGATSGEAYFNGMAAERFCVRN------SGARAVVEGVGDH 1528
++ + + + + + Y + + Y +R +++GV
Sbjct: 110 RMYIEQRDRLYNDNQVFAKYNVSRLQPYLK--------LRQALLELRPAKNVLIDGVL-- 159
Query: 1529 GCEYMTGGTVVVLGKTGRNFA--AGMSGGIAYV-------------------LDVDGKFR 1567
G G T V L ++ M I ++ +D +
Sbjct: 160 GS----GKTWVAL-DVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWT 214
Query: 1568 SRCNPELVDLDKVEEEEDIITLRMMIQQHQRYTNSQLAKEVLADFENLLPKFIKVF---- 1623
SR + ++ + LR +++ Y N L VL + +N K F
Sbjct: 215 SRSDHSSNIKLRIHSIQA--ELRRLLKSKP-YENCLL---VLLNVQN--AKAWNAFNLSC 266
Query: 1624 -----PRDYKRVLASMKVAAAQEAAEDAVKDAEEPDEADFKEKDAFEELKKMAIASLNEK 1678
R K+V + A + D PDE K + L
Sbjct: 267 KILLTTRF-KQVTDFLSAATTTHISLDHHSMTLTPDEV----KSLLLKYLDCRPQDLPR- 320
Query: 1679 SNQEAEQVEPTKRPSRVADAVKHRGFIAYEREGVQYRDPNIRMNDWKEVMEESKPGPLLK 1738
E P I RD ++WK V + L
Sbjct: 321 ---EVLTTNPR-----------RLSII-----AESIRDGLATWDNWKHVNCDK-----LT 356
Query: 1739 TQSARCMDCGTP 1750
T ++ P
Sbjct: 357 TIIESSLNVLEP 368
Score = 52.2 bits (124), Expect = 2e-06
Identities = 78/595 (13%), Positives = 152/595 (25%), Gaps = 198/595 (33%)
Query: 9 FVQLRANSSLTSLSRKSGYPQSNIVSPLSS-GGRAKAARCAAAKKSTVLERRFFGNQLRL 67
+++LR +L L P N++ + G K S ++ +
Sbjct: 137 YLKLR--QALLELR-----PAKNVL--IDGVLGSGKTWVALDVCLSYKVQCKMDFK---- 183
Query: 68 AGSERVHLWRSDGPGKSPKLRVVVRSALSGVPEKPLGLYDPKFDKDSCGVGFVAELSGES 127
+ W + SP+ V E L + D + + + +
Sbjct: 184 -----IF-WLNLKNCNSPET----------VLEMLQKLLY-QIDPNWTSRSDHSS-NIKL 225
Query: 128 SRKTITDALEMLVRMAHRGAC------------------GCET--NTGDGAGILVALPHD 167
+I L L++ C C+ T
Sbjct: 226 RIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRF----------- 274
Query: 168 FFKEAAKNVGFQLPPPGEYAVGMFFLPQSENRREESKKVFTKVAESLGHTVLGWRAVPTD 227
K V L + + + T E +L + +
Sbjct: 275 ------KQVTDFLSAATTTHISL----------DHHSMTLTP-DEVKS--LLL-KYLDCR 314
Query: 228 NSGLGNSALQTEPVVEQVFLTPSLRSKVD-FEN-QMYILRRVSMAAIRESLNLEHGGAKD 285
L L T P + S+R + ++N + +++ I SLN
Sbjct: 315 PQDLPREVLTTNPRRLSIIAE-SIRDGLATWDNWKHVNCDKLTTI-IESSLN-------- 364
Query: 286 FYICSLSSRTVVYKGQLKPIQMKDYYYADLGNERFTSYMALIHSRFSTNTFPSWDRAQPM 345
L+P + + + L + FP P
Sbjct: 365 ---------------VLEPAEYRKMFD-RLS----------V--------FPP-SAHIPT 389
Query: 346 RILGHNGEINTLRGNVNWMKAREGLLKCKELGLSKDEMKKLLPIVDVSSSDSGAFDGVLE 405
+L + W + + ++K L+ S LE
Sbjct: 390 ILLS-----------LIWFDVIK---SDVMVVVNKLHKYSLVEK-QPKESTISIPSIYLE 434
Query: 406 LLVRAG------RSLPEAVMMMIPEAW-QNDKNMDPQRKALYEYFS---ALMEPWDGPAL 455
L V+ RS+ + IP+ + +D + Y + +E + L
Sbjct: 435 LKVKLENEYALHRSIVDHY--NIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTL 492
Query: 456 IS--FTDGRYLGATLDRNGL---RPG---------RFYITHSGRVIMASEVGVVDIPPED 501
F D R+L + + G +FY + I D
Sbjct: 493 FRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPY--------------ICDND 538
Query: 502 VLRKGRLNPGMMLLVDF----EKRIVVDDEALKQQYSLARPYGEWL-----QRQK 547
+ +N ++DF E+ ++ + +L Q Q+
Sbjct: 539 PKYERLVN----AILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQR 589
Score = 47.2 bits (111), Expect = 5e-05
Identities = 31/242 (12%), Positives = 64/242 (26%), Gaps = 64/242 (26%)
Query: 1558 YVLDVDGKFRSRCNPELVDLDKVEEEEDIITLRMMIQQHQRYTN-----------SQLAK 1606
Y+ D + N + V + + LR + + + N + +A
Sbjct: 112 YIEQRDRLYND--NQVFAKYN-VSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVAL 168
Query: 1607 EVLADFENLLPKFIKVF---------PRDYKRVLASMKVAAAQEAAEDAVKDAEEPDEAD 1657
+V ++ K+F P +L + + +
Sbjct: 169 DVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH 228
Query: 1658 FKEKDAFEELKKMAIASLNEKS-----N-QEAEQVEP---------TKRPSRVADAVKHR 1702
EL+++ + E N Q A+ T R +V D +
Sbjct: 229 ----SIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLS-- 282
Query: 1703 GFIAYEREGVQYRDPNIRMNDWKEVMEESKPGPLLKTQSARCMDCGT---PFCHQVC-IA 1758
+I ++ + + LL + +DC P +V
Sbjct: 283 --------AATTT--HISLDHHSMTLTPDEVKSLL----LKYLDCRPQDLP--REVLTTN 326
Query: 1759 PF 1760
P
Sbjct: 327 PR 328
Score = 45.6 bits (107), Expect = 2e-04
Identities = 49/330 (14%), Positives = 103/330 (31%), Gaps = 71/330 (21%)
Query: 1116 TRNSTAGVGLISPPPHHDIYSIEDLAQLIYDLKNANPGARISVKLVSEAGVG--VIASGV 1173
R+ + +++ ++ +L L P + + G G +A V
Sbjct: 115 QRDRLYNDNQVFAK--YNVSRLQPYLKLRQALLELRPAKNVLI--DGVLGSGKTWVALDV 170
Query: 1174 VKGHADHVLISGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTILQTDGQL 1233
+ + D W +KN P + E Q L + Q D
Sbjct: 171 CL---SYKVQCKMDFKI---FWLNLKNCNSPETV--LEMLQKL---------LYQIDPNW 213
Query: 1234 KTGRDVAIAALLGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLREKFAGEPE 1293
+ D + L A L L + K ++N C + VL +
Sbjct: 214 TSRSDHSSNIKLRIHSI---QAELRRL---LKSKPYEN-CLL-------VLLN--VQNAK 257
Query: 1294 HVINFFF---MLAEELREIMSQLGFRTITEMIG---RSDMLEVDKEVTKTNEKLENIDLS 1347
F +L + ++ F+ +T+ + + + +T T ++++++ L
Sbjct: 258 AWNAFNLSCKIL------LTTR--FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLK 309
Query: 1348 LLLRPAADLRPEAAQYCVQKQDHGLDMALDQKLIKLSKAALEKALPVYIETPVCN-VNRA 1406
L DL E + +++ + I+ A + + C+ +
Sbjct: 310 YLDCRPQDLPREV------LTTNPRRLSIIAESIRDGLATWD-----NWKHVNCDKLTTI 358
Query: 1407 VGTMLSH----EVTKRYH-LVGLPADTIHI 1431
+ + L+ E K + L P HI
Sbjct: 359 IESSLNVLEPAEYRKMFDRLSVFPPSA-HI 387
Score = 41.0 bits (95), Expect = 0.005
Identities = 68/463 (14%), Positives = 141/463 (30%), Gaps = 137/463 (29%)
Query: 1294 HVINFFFMLAEELREIMSQLGFRTITEMIGRS--------DMLEVDKEVTKTNEKLENID 1345
H ++F E E Q ++ I + + D+ ++ K + + E++++I
Sbjct: 5 HHMDF------ETGEH--QYQYKDILSVFEDAFVDNFDCKDVQDMPKSIL-SKEEIDHI- 54
Query: 1346 LSLLLRPAADLRPEAAQYCV-QKQDHGLDMALDQKL--------IKLSKAALEKALP--V 1394
++ A + + KQ+ + +++ L + + ++ +
Sbjct: 55 ---IMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRM 111
Query: 1395 YIET--PVCNVNRAVGTMLSHEVTKRYHLVGLPADTIHIKLTGSAGQSVGAFLCPGILLE 1452
YIE + N N+ + V+ R +KL + LLE
Sbjct: 112 YIEQRDRLYNDNQVFA---KYNVS-RLQPY--------LKLRQA-------------LLE 146
Query: 1453 LEGDSNDYVG-KGLSG-GKIV-------AYPPKGSLFDPKVN-IVIGNVALYGATSGEAY 1502
L V G+ G GK +Y + D K+ + + N S E
Sbjct: 147 L--RPAKNVLIDGVLGSGKTWVALDVCLSYKVQ-CKMDFKIFWLNLKNC-----NSPETV 198
Query: 1503 FNGMAAERFCVR---NSGARAVVEGVGDHGCEYMTGGTVVVLGKTGRNFAAGMSGGIAY- 1558
+ ++ + N +R+ DH + + R
Sbjct: 199 LEML--QKLLYQIDPNWTSRS------DHSSNIKL--RIHSIQAELRRLLKSKPYENCLL 248
Query: 1559 VLD-V-DGK----FRSRC-------NPELVDLDKVEEEEDIITLRMMIQQHQRYTNSQLA 1605
VL V + K F C ++ D I + T +
Sbjct: 249 VLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHIS----LDHHSMTLTPDE-V 303
Query: 1606 KEVLADFENL----LPKFI-KVFPRDYKRVLASMKVAAAQEAAEDAVKDAEEPDEADFKE 1660
K +L + + LP+ + PR S+ +A + ++D D +
Sbjct: 304 KSLLLKYLDCRPQDLPREVLTTNPR-----RLSI-IAES-------IRD--GLATWDNWK 348
Query: 1661 KDAFEELKKMAIASLNEKSNQEAEQV--------EPTKRPSRV 1695
++L + +SLN E ++ P+ +
Sbjct: 349 HVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTIL 391
Score = 39.8 bits (92), Expect = 0.009
Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 25/136 (18%)
Query: 1594 QQHQRYTNSQLAKEVLADFENLLPKFIKVFPRDY--KRVLASMKVAAAQEAAEDAVKDAE 1651
H + + + E ++++L F F ++ K V K ++ E
Sbjct: 1 HHHHHHMDFETG-EHQYQYKDILSVFEDAFVDNFDCKDVQDMPK----------SILSKE 49
Query: 1652 EPDEADFKEKDAFEELKKMAIASLNEKSNQEAEQ-VEPTKRPSRVADAVKHRGFIAYERE 1710
E D KDA ++ +L K + ++ VE R + F+
Sbjct: 50 EIDHI-IMSKDAVSGTLRL-FWTLLSKQEEMVQKFVEEVLRIN--------YKFL-MSPI 98
Query: 1711 GVQYRDPNIRMNDWKE 1726
+ R P++ + E
Sbjct: 99 KTEQRQPSMMTRMYIE 114
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 68.9 bits (168), Expect = 1e-11
Identities = 115/640 (17%), Positives = 179/640 (27%), Gaps = 245/640 (38%)
Query: 744 YTLLV----------LSDRAFSSKRVAVSSLLAVG---AVHHHLVKNLERTR-IGLIVES 789
+ LLV L ++ F+ + A LV + +G +
Sbjct: 18 HVLLVPTASFFIASQLQEQ-FNKILPEPTEGFAADDEPTTPAELV-----GKFLGYVSSL 71
Query: 790 AEPREVHHFCTLVGFGADAI-CPYLATEAIWRLQVDGKIPPKASGEFHSKDELVKKYFKA 848
EP +V F ++ YL I L K+ + EL+K Y A
Sbjct: 72 VEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAA--KLLQENDTTLVKTKELIKNYITA 129
Query: 849 SNYGMMKVLAKMGISTL---ASYKGAQIFEAL----GLSSEVIE---------KCFAGTP 892
+ K S L AQ+ A+ G + + E G
Sbjct: 130 RIM-AKRPFDKKSNSALFRAVGEGNAQLV-AIFGGQGNTDDYFEELRDLYQTYHVLVGDL 187
Query: 893 SRVDGATFEVLASDA----------LHLHE-LAFPTRILPPG----SAEAVALP------ 931
+ T L L++ E L P+ P S ++ P
Sbjct: 188 IKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNT-PDKDYLLSI-PISCPLIGVIQ 245
Query: 932 -------------NPGD-YHWRKGGEIHLND---PLAIAK-----------------L-- 955
PG+ + KG H +AIA+ L
Sbjct: 246 LAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFF 305
Query: 956 -----QEAARGNSV-AAYKEYSKRIQELNKTC--NLRGLLKFKEADVKIPLEEVE----- 1002
EA S+ + E S E + ++ L E+V+
Sbjct: 306 IGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNL----------TQEQVQDYVNK 355
Query: 1003 -----PASEIV--------KRF-CTGAMSYGSISLEAHTTLATAMNKIGGKSNTGEGGEQ 1048
PA + V K +G SL L + K S G +Q
Sbjct: 356 TNSHLPAGKQVEISLVNGAKNLVVSGP----PQSLYG---LNLTLRKAKAPS----GLDQ 404
Query: 1049 PSRMEPLSDGSMNPKRSAIKQVASGRFG-VS----SYYLTNADELQIKMAQGAKPGEGGE 1103
SR+ P S +R K S RF V+ S+ L A +L K +
Sbjct: 405 -SRI-PFS------ER---KLKFSNRFLPVASPFHSHLLVPASDLINK-----------D 442
Query: 1104 LPGHKVIGDIAVTRNSTAGVGLISPPPHHDIYSIEDLAQLIYDLKNANPGA--RISVKLV 1161
L + V ++ +D+ +YD + G+ R+ +
Sbjct: 443 LVKNNV------------------------SFNAKDIQIPVYDTFD---GSDLRVLSGSI 475
Query: 1162 SEAGVGVIASGVV------KGHADHVLISGHDGGTGASRWTGIKNAGLPWELGLAETHQT 1215
SE V I V + A H+L D G G + GL
Sbjct: 476 SERIVDCIIRLPVKWETTTQFKATHIL----DFGPGGA-------------SGLG----V 514
Query: 1216 LVANDLRGRTILQTDGQLKTGRDVAIAALLG---AEEFGF 1252
L + G TG V +A L +++GF
Sbjct: 515 LTHRNKDG-----------TGVRVIVAGTLDINPDDDYGF 543
Score = 68.2 bits (166), Expect = 3e-11
Identities = 102/538 (18%), Positives = 161/538 (29%), Gaps = 190/538 (35%)
Query: 725 LEETLDRICAEARDAIKEGYTLLVLSDRAFSSKRVAVSSLL-AVGAVHHHLVK------N 777
L + D + ++ IK T +++ R F + + S+L AVG + LV N
Sbjct: 108 LLQENDTTLVKTKELIKNYITARIMAKRPFD--KKSNSALFRAVGEGNAQLVAIFGGQGN 165
Query: 778 LE-------------RTRIG-LIVESAEPREVHHFCTLVGFGADAICPYLATEAI----W 819
+ +G LI SAE L+ D + T+ + W
Sbjct: 166 TDDYFEELRDLYQTYHVLVGDLIKFSAE-----TLSELIRTTLD--AEKVFTQGLNILEW 218
Query: 820 RLQVDGKIPPKASGEFHSKDELVKKYFKASNYGMMKVLAKMGISTLASYKGAQIFEALGL 879
L+ P K Y + L +G+ LA Y + LG
Sbjct: 219 -LENPSNTPDKD-------------YLLSIPISC--PL--IGVIQLAHY--VVTAKLLGF 258
Query: 880 SSEVIEKCFAGTPSRVDG-------------ATFEVLASDALHL--------HELAFPTR 918
+ + G G +F V A+ + +E A+P
Sbjct: 259 TPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYE-AYPNT 317
Query: 919 ILPPGSAEAVALPNPGDYHWRKGGEIHLNDP---LAIAKLQEAARGNSVAAYKEYSKRIQ 975
LPP S +L N E P L+I + ++ +
Sbjct: 318 SLPP-SILEDSLEN---------NE---GVPSPMLSI-------SNLT---QEQVQDYVN 354
Query: 976 ELNKTCNLRGLLKFKEADVKIPLEEVEPASEIVKRFCTGAMSYGSISLEAHTTLATAMNK 1035
+ N V+I L V A +V +G SL L + K
Sbjct: 355 KTNSH-------LPAGKQVEISL--VNGAKNLV---VSGP----PQSLYG---LNLTLRK 395
Query: 1036 IGGKSNTGEGGEQPSRMEPLSDGSMNPKRSAIKQVASGRFG-VS----SYYLTNADELQI 1090
S G +Q SR+ P S +R K S RF V+ S+ L A +L
Sbjct: 396 AKAPS----GLDQ-SRI-PFS------ER---KLKFSNRFLPVASPFHSHLLVPASDLIN 440
Query: 1091 K-MAQGAKPGEGGELPGHKVIGDIAV--TRNSTAGVGLISPPPHHDI----YSI-EDLAQ 1142
K + + ++ I V T + G D+ SI E +
Sbjct: 441 KDLVKNNVSFNAKDI-------QIPVYDTFD-----G-------SDLRVLSGSISERIVD 481
Query: 1143 LIY----DLKNAN-----------PG--ARISVKLVSE----AGVGVIASGVVKGHAD 1179
I + PG + + L GV VI +G + + D
Sbjct: 482 CIIRLPVKWETTTQFKATHILDFGPGGASGLG-VLTHRNKDGTGVRVIVAGTLDINPD 538
Score = 63.9 bits (155), Expect = 4e-10
Identities = 110/652 (16%), Positives = 191/652 (29%), Gaps = 226/652 (34%)
Query: 267 VSMAAIRESLNLEHGGAKDFYICSLSSRTVVYKGQLKPIQMKDYYYADLGNERFTSYMAL 326
+ + R L L HG SL +V P ++ A E+F
Sbjct: 1 MDAYSTR-PLTLSHG--------SLEHVLLV------PTAS--FFIASQLQEQFNK---- 39
Query: 327 IHSRFSTNTFPSWDRAQPMRILGHNGEINTLRGNVNWMKAREGLLKCKELGLSKDEMKKL 386
P +P + E L+ K LG
Sbjct: 40 --------ILP-----EPTEGFAADDEP----------TTPAELV-GKFLGYVSSL---- 71
Query: 387 LPIVDVSSSDSGAFDGVLELLVRA-------GRSLPEAVMMMIPEAWQNDKNMDPQRKAL 439
V S G FD VL L + G + ++ E ND + ++ +
Sbjct: 72 -----VEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQE---NDTTLVKTKELI 123
Query: 440 YEYFSALM---EPWDGP---ALI-SFTDGR---YL-----GATLDR-NGLRPGRFYITHS 483
Y +A + P+D AL + +G G T D LR Y T+
Sbjct: 124 KNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFEELR--DLYQTYH 181
Query: 484 GRVIMASEVGVVDIPPEDVLRK--GRLNPGMMLLVDFEKRIVVDDEALKQQYSLARPYGE 541
V D+++ L+ L+ R +D E + ++ E
Sbjct: 182 VLV-------------GDLIKFSAETLSE----LI----RTTLDAEKV---FTQGLNILE 217
Query: 542 WLQRQKIELKNIVESIHKSE-----RVS-PGIAGVLPASNDDDNMENMGIHGLLAPLKAF 595
WL+ + + +S P I GV+ ++ + K
Sbjct: 218 WLENP--------SNTPDKDYLLSIPISCPLI-GVIQLAH------------YVVTAKLL 256
Query: 596 GYTVEALEMLMLPMAKDGTEALGSMGNDAPLAV---MSNREKLTFEYFKQ--------MF 644
G+T L + + AV ++ ++E F +F
Sbjct: 257 GFTPGEL--------RSYLKGATGHSQGLVTAVAIAETD----SWESFFVSVRKAITVLF 304
Query: 645 -----AQVTNPPIDPIREKIVTSMECMIGPEGVLTETTEEQCHRLSLKGPLLSIEEMEA- 698
P + I+ + + EGV + LS+ L+ E+++
Sbjct: 305 FIGVRCYEAYPNTS-LPPSILE--DSLENNEGVPS-------PMLSISN--LTQEQVQDY 352
Query: 699 IKRMNYRGWRSKVLDITYSKDHGRR-----GLEETLDRICAEARDAIKEGYTLLVLSDRA 753
+ + N K ++I S +G + G ++L + R K L D++
Sbjct: 353 VNKTNSHLPAGKQVEI--SLVNGAKNLVVSGPPQSLYGLNLTLR-KAKAPSGL----DQS 405
Query: 754 ---FSSKRVAVS-SLLAVGA-VH-HHL-------VKNLERTRIGLIVES-AEPREVHHFC 799
FS +++ S L V + H H L K+L + + + P V+
Sbjct: 406 RIPFSERKLKFSNRFLPVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIP--VYDTF 463
Query: 800 TLVGFGAD----------AICPYLATEAI-WRLQVDGKI-------PPKASG 833
G+D I + + W K P ASG
Sbjct: 464 D----GSDLRVLSGSISERIVDCIIRLPVKWETTTQFKATHILDFGPGGASG 511
Score = 63.9 bits (155), Expect = 5e-10
Identities = 53/300 (17%), Positives = 87/300 (29%), Gaps = 115/300 (38%)
Query: 334 NTFPS----WDRA------------------QPMRILGHNGEINTLRGNVNWMKAREGLL 371
T + W+RA P+ + H G R N+ +
Sbjct: 1637 KTSKAAQDVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRENYSA-----M 1691
Query: 372 KCKELGLSKDEMKKLLPIVDVSSSDSGAFDGVLELLVRAGRSLPE----AVM---MMIPE 424
+ + K + +K+ ++ S+ S F LL S + A+ E
Sbjct: 1692 IFETIVDGKLKTEKIFKEINEHST-SYTFRSEKGLL-----SATQFTQPALTLMEKAAFE 1745
Query: 425 AWQNDKNMDPQRKA-----LYEYFSALMEPWDGPA-LISFTDGRYLGATLDRNGLRPGRF 478
+ K + P L EY +AL A ++S + R G
Sbjct: 1746 DLK-SKGLIPADATFAGHSLGEY-AALA----SLADVMSIESL----VEVVF--YR-GMT 1792
Query: 479 YITHSGRVIMASEVGVVDIPPEDVLRKGRLNPGMMLLVDFEKRIVVDDEALK-------- 530
M V P D GR N GM+ + EAL+
Sbjct: 1793 ---------MQVAV------PRD--ELGRSNYGMIAINPGRVAASFSQEALQYVVERVGK 1835
Query: 531 ---------------QQYSLARPYGE------------WLQRQKIELKNIVESIHKSERV 563
QQY A G+ +++ QKI++ + +S+ E V
Sbjct: 1836 RTGWLVEIVNYNVENQQYVAA---GDLRALDTVTNVLNFIKLQKIDIIELQKSLS-LEEV 1891
Score = 53.5 bits (128), Expect = 8e-07
Identities = 99/555 (17%), Positives = 167/555 (30%), Gaps = 221/555 (39%)
Query: 99 PEKPLGLYDPKFDKDSCGVGFVAELSGESSRKTITDALEMLVRMAHRGA-CGCETNTGDG 157
P P L KF +G+V+ L S L + + G + +
Sbjct: 54 PTTPAELV-GKF------LGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHA--- 103
Query: 158 AGILVALPHDF------FKEAAKNVGFQLPPPGEYAVGMFFLPQSENRREESKKVFTKVA 211
+ L + KE KN Y + +++ S
Sbjct: 104 --LAAKLLQENDTTLVKTKELIKN----------YITARIMAKRPFDKKSNS-------- 143
Query: 212 ESLGHTVLGWRAVPTDNSGL-------GNSA-----LQT-----EPVVEQVF------LT 248
+L +RAV N+ L GN+ L+ +V + L+
Sbjct: 144 -AL------FRAVGEGNAQLVAIFGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLS 196
Query: 249 PSLRSKVDFE--------------------NQMYILR-RVSM-----------AAIRESL 276
+R+ +D E ++ Y+L +S + L
Sbjct: 197 ELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLL 256
Query: 277 NLEHG-------GA-------------------KDFYICSLSSRTVV----YKGQ----- 301
G GA + F++ + TV+ +
Sbjct: 257 GFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPN 316
Query: 302 --LKPIQMKDYYYADLGNERFTSYMALIH--SR-------FSTNT-FPSWDRAQPMRILG 349
L P ++D + NE S M I ++ TN+ P+ + + I
Sbjct: 317 TSLPPSILED---SLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPA---GKQVEISL 370
Query: 350 HNGEIN--------TLRGNVNW---MKAREGLLKCKELGLSKDEMKKL------LPIVDV 392
NG N +L G KA GL + + + S+ +KL LP+
Sbjct: 371 VNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLDQSR-IPFSE---RKLKFSNRFLPV--- 423
Query: 393 SS---SD--SGAFDGVLELLVRAGRSLPEAVMMMIP----EAWQNDKNMDPQ-RKALYEY 442
+S S A D + + LV+ S A + IP + + + + + +
Sbjct: 424 ASPFHSHLLVPASDLINKDLVKNNVSFN-AKDIQIPVYDTFDGSDLRVLSGSISERIVD- 481
Query: 443 FSALMEP--WD-------------GPALISFTDGRYLGATLDRNGLRPGRFYITHSG-RV 486
+ P W+ GP S G LG RN + G G RV
Sbjct: 482 -CIIRLPVKWETTTQFKATHILDFGPGGAS---G--LGVLTHRN--KDGT------GVRV 527
Query: 487 IMASEVGVVDIPPED 501
I+A G +DI P+D
Sbjct: 528 IVA---GTLDINPDD 539
Score = 48.9 bits (116), Expect = 2e-05
Identities = 37/261 (14%), Positives = 82/261 (31%), Gaps = 88/261 (33%)
Query: 631 NREKLTFEYFKQMFAQVTNPPIDPIREKIVTSMECMIGPEGVLTETTEEQCHRLSLKGPL 690
N + FE + T I E ++ +G+L+ T Q P
Sbjct: 1687 NYSAMIFETIVDGKLK-TEKIFKEINEH--STSYTFRSEKGLLSATQFTQ--------PA 1735
Query: 691 LSIEEMEAIKRMNYRGWRSKVLDITYSKDHGRRGLEETLDRICA-----EARDAIKEGYT 745
L++ E A + +SK GL D A E Y
Sbjct: 1736 LTLMEK-AA----FEDLKSK-------------GLIP-ADATFAGHSLGE--------YA 1768
Query: 746 LLVLSDRAFSSKRVAVSSLLAVG-AVHHHLVKNLERTRIGLIVESAEPRE---------- 794
L +++ ++++ V +V R G+ ++ A PR+
Sbjct: 1769 AL-----------ASLADVMSIESLV--EVV----FYR-GMTMQVAVPRDELGRSNYGMI 1810
Query: 795 -VHHFCTLVGFGADA---ICPYLATEAIWRLQV-----DGK--IPPKASGEFHSKDELVK 843
++ F +A + + W +++ + + + A+G+ + D +
Sbjct: 1811 AINPGRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVENQQYV---AAGDLRALDTVTN 1867
Query: 844 --KYFKASNYGMMKVLAKMGI 862
+ K ++++ + +
Sbjct: 1868 VLNFIKLQKIDIIELQKSLSL 1888
Score = 47.4 bits (112), Expect = 6e-05
Identities = 76/422 (18%), Positives = 135/422 (31%), Gaps = 126/422 (29%)
Query: 1251 GFSTAPL-ITLGCIMMRKCHKNTCPV-----GIATQDPVLREKF-AGEPEHVINFFFMLA 1303
+ST PL ++ G + ++ V IA+Q L+E+F PE F
Sbjct: 3 AYSTRPLTLSHGSL------EHVLLVPTASFFIASQ---LQEQFNKILPEPTEGF--AAD 51
Query: 1304 EELR---EIMSQ-LGFRTITEMI---GRSDMLEVDKEVTKTNEK--LENIDL-SLLLRPA 1353
+E E++ + LG+ ++ ++ +V E LE D+ +L A
Sbjct: 52 DEPTTPAELVGKFLGY--VSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHAL----A 105
Query: 1354 ADLRPEAAQYCVQKQD-----HGLDMALDQKLIK-----LSKAALEKALPVYIETPVCNV 1403
A L E V+ ++ + + K L +A E +
Sbjct: 106 AKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLV-------- 157
Query: 1404 NRAV----GTM------LSHEVTKRYHLVGLPADTIHIKLTGSAGQSVGAFLCPGILLEL 1453
A+ G L ++ + YH L D I L L+
Sbjct: 158 --AIFGGQGNTDDYFEELR-DLYQTYH--VLVGDLIK---------FSAETLSE--LIRT 201
Query: 1454 EGDSNDYVGKGLSGGKIVAY-------PPKGSLFDPKVNI-VIGNVAL--YGATSGEAYF 1503
D+ +GL+ I+ + P K L ++ +IG + L Y T A
Sbjct: 202 TLDAEKVFTQGLN---ILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVT---AKL 255
Query: 1504 NGMAAERFCVRNSGARAVVEGVGDHGCEYMTGGTVVVLGKTGRNFAAGMSGGIAYVLDVD 1563
G GA +G+ + + +F + I + +
Sbjct: 256 LGFTPGELRSYLKGATGHSQGL--------VTAVAIAETDSWESFFVSVRKAITVLFFI- 306
Query: 1564 GKFRSRC---------NPELVDLDKVEEEEDIITLRMM---------IQQHQRYTNSQLA 1605
G RC P +++ D +E E + + M+ +Q + TNS L
Sbjct: 307 G---VRCYEAYPNTSLPPSILE-DSLENNEGVPSP-MLSISNLTQEQVQDYVNKTNSHLP 361
Query: 1606 KE 1607
Sbjct: 362 AG 363
Score = 45.0 bits (106), Expect = 3e-04
Identities = 103/675 (15%), Positives = 184/675 (27%), Gaps = 261/675 (38%)
Query: 914 AFPTR--ILPPGSAEAVALPNPGDYHWRKGGEIHLNDPLAIAKLQEAARGNSVAAYKEYS 971
A+ TR L GS E L P + L + L E G AA E +
Sbjct: 3 AYSTRPLTLSHGSLE-HVLLVPTASFFI--ASQ-LQEQFN-KILPEPTEG--FAADDEPT 55
Query: 972 KRIQELNKTCNLRGLLKF-------KEADVKIPLEEVEPASEIVKRFCTGAMSYGSISLE 1024
EL + KF E ++V + + F + I
Sbjct: 56 TPA-EL--------VGKFLGYVSSLVEPSKVGQFDQV--LNLCLTEFENCYLEGNDI--- 101
Query: 1025 AHTTLATAMNKIGGKSNTGEGGEQP-------SRM---EPLSDGSMNPKRSA-IKQVASG 1073
H A + +++T + +R+ P SA + V G
Sbjct: 102 -HALAAK----LLQENDTTLVKTKELIKNYITARIMAKRPFD----KKSNSALFRAVGEG 152
Query: 1074 R------F---GVSSYYLTNADELQ-------------IKMAQG------AKPGEGGELP 1105
F G + Y +EL+ IK + + ++
Sbjct: 153 NAQLVAIFGGQGNTDDYF---EELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVF 209
Query: 1106 GHKVIGDIAV---TRNSTAGVG-LISPP---PHHDIYSIEDLAQLIYDLKNA--NPGA-R 1155
+ +I ++T L+S P P + LA + K PG R
Sbjct: 210 TQGL--NILEWLENPSNTPDKDYLLSIPISCPLIGVIQ---LAHYVVTAKLLGFTPGELR 264
Query: 1156 ISVKLVSEAGVGVIASGVVKGHADHVLISGHDGGTGASRWTGIKNA--GLPWELGLAETH 1213
+K + G++ + V I+ + S + ++ A L + +G+ +
Sbjct: 265 SYLKGATGHSQGLVTA---------VAIAE--TDSWESFFVSVRKAITVLFF-IGV-RCY 311
Query: 1214 QTL-------------VAND---------LRG-------RTILQTDGQLKTGRDVAIAAL 1244
+ + N+ + + +T+ L G+ V I+ +
Sbjct: 312 EAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLV 371
Query: 1245 LGAEEF---GFSTAPLITLGCIMMRKCHKNTCPVGIATQD--------PVLREKF--AGE 1291
GA+ G + L L + +RK P G+ Q +F
Sbjct: 372 NGAKNLVVSGPPQS-LYGL-NLTLRKAK---APSGL-DQSRIPFSERKLKFSNRFLPVAS 425
Query: 1292 PEHVINFFFMLAEELREIMSQLGFRTITEMIGRSDMLEVDKEVTKTNEKLENIDLSLLLR 1351
P H S LL
Sbjct: 426 PFH----------------------------------------------------SHLLV 433
Query: 1352 PAADLRPEAAQYCVQKQDHGLDMALDQKLIKLSKAALEKALPVY-IETPVCNVN-RAVGT 1409
PA+DL +D L + + + + +PVY + R +
Sbjct: 434 PASDL---------INKD------LVKNNVSFNAKDI--QIPVYDTFD---GSDLRVLSG 473
Query: 1410 MLSHEVTKRYHLVGLPAD--------TIHI------------KLTGSAGQSVGAFLCPGI 1449
+S + ++ LP HI LT G +
Sbjct: 474 SISERIVDC--IIRLPVKWETTTQFKATHILDFGPGGASGLGVLTHRNKDGTGV----RV 527
Query: 1450 LL--ELEGDSNDYVG 1462
++ L+ + +D G
Sbjct: 528 IVAGTLDINPDDDYG 542
Score = 42.7 bits (100), Expect = 0.001
Identities = 56/365 (15%), Positives = 94/365 (25%), Gaps = 175/365 (47%)
Query: 694 EEMEAIKRMNYRGWRSKVLDI-----TYSKDH--GRRGLEETLDRICAEARDAIKEGYTL 746
+ + Y G+ +LDI H G +G I+E Y+
Sbjct: 1647 NRADNHFKDTY-GFS--ILDIVINNPVNLTIHFGGEKGK-------------RIRENYSA 1690
Query: 747 LV---LSDRAFSSKRVAVSSLLAVGAVHHHLVKN--------LERTRIGLIVESAEPREV 795
++ + D ++++ ++ H L T + +P
Sbjct: 1691 MIFETIVDGKLKTEKI-------FKEINEHSTSYTFRSEKGLLSAT------QFTQP--- 1734
Query: 796 HHFCTLVGFGADAICPYLATE-AIWR-LQVDGKIPPKA-----S-GEFHS---------- 837
A+ E A + L+ G IP A S GE+ +
Sbjct: 1735 ------------AL---TLMEKAAFEDLKSKGLIPADATFAGHSLGEY-AALASLADVMS 1778
Query: 838 -KD--ELVKK------------YFKASNYGMMKVLAKMGISTLASYKGAQIFEALGLSSE 882
+ E+V SNYGM+ + ++ A S E
Sbjct: 1779 IESLVEVVFYRGMTMQVAVPRDELGRSNYGMIAI------------NPGRV--AASFSQE 1824
Query: 883 VIEKCFAGTPSRVDGATFEVLASDALHLHELAFPTRILPPGSAEAVALPNPGDYHWRKGG 942
++ RV T ++ E V N Y
Sbjct: 1825 ALQYVVE----RVGKRTGWLV----------------------EIV---N---Y------ 1846
Query: 943 EIHLNDP---LAIAKLQEAARGNSVAAYKEYSKRIQELNKTCNLRGL--LKFKEADVKIP 997
N A G+ A + + N L + E +
Sbjct: 1847 ----NVENQQYVAA-------GDLRA--------LDTVTNVLNFIKLQKIDIIELQKSLS 1887
Query: 998 LEEVE 1002
LEEVE
Sbjct: 1888 LEEVE 1892
Score = 35.4 bits (81), Expect = 0.25
Identities = 61/333 (18%), Positives = 110/333 (33%), Gaps = 84/333 (25%)
Query: 1207 LGLAETHQTLVAN--------DLRGRTILQT--DGQLKTGRDVAIA---ALLGAEEFGFS 1253
L + H L A ++ + +++ ++ R AL A G
Sbjct: 96 LEGNDIH-ALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEG-- 152
Query: 1254 TAPLITL----GCIMMRKCHKNTCPVGIATQDPV--LREKFAGEPEHVINFFFMLAEELR 1307
A L+ + G T D LR+ + V + AE L
Sbjct: 153 NAQLVAIFGGQG----------------NTDDYFEELRDLYQTYHVLVGDLIKFSAETLS 196
Query: 1308 EIMSQLGFRTITEMIGRS-DMLEV--DKEVTKTNEKLENIDLSLLLRPAADLRPEAAQYC 1364
E++ ++ + ++LE + T + L +I +S P + + A Y
Sbjct: 197 ELIRTT--LDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISC---PLIGVI-QLAHYV 250
Query: 1365 VQKQDHGLDMALDQKLIKLSKAAL--EKALP--VYI------ETPVCNVNRAVGTML--- 1411
V + G +L K A + L V I E+ +V +A+ +
Sbjct: 251 VTAKLLGFTPG---ELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIG 307
Query: 1412 --SHEVTKRYHLVGLPADTIHIKLTGSAGQSVGAFLCPGILLELEGDSNDYVGKGLSGGK 1469
+E Y LP + L + G P +L + + + V ++ K
Sbjct: 308 VRCYEA---YPNTSLPPSILEDSLENNEGV-------PSPMLSISNLTQEQVQDYVN--K 355
Query: 1470 IVAYPPKG-----SLFD-PKVNIVIGN-VALYG 1495
++ P G SL + K +V G +LYG
Sbjct: 356 TNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYG 388
Score = 33.9 bits (77), Expect = 0.74
Identities = 30/194 (15%), Positives = 50/194 (25%), Gaps = 74/194 (38%)
Query: 1594 Q--QHQ-----RYTNSQLAKEVL--AD--FENLL-----------PKFIKVFPRDYK-RV 1630
Q Q Q Y S+ A++V AD F++ P + + K +
Sbjct: 1624 QGSQEQGMGMDLYKTSKAAQDVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKR 1683
Query: 1631 LASMKVAAAQEAAEDAVKDAEEPDEADFKEKDAFEELKKMAIAS----LNEKSN-Q---- 1681
+ A E D E+ FKE + E S L+ Q
Sbjct: 1684 IRENYSAMIFETIVDGKLKTEKI----FKEIN--EHSTSYTFRSEKGLLSATQFTQPALT 1737
Query: 1682 ----------EAEQVEPTKRPSRVA--------------------DA---VKHRG-FIAY 1707
+++ + P + A V +RG +
Sbjct: 1738 LMEKAAFEDLKSKGLIPA--DATFAGHSLGEYAALASLADVMSIESLVEVVFYRGMTMQV 1795
Query: 1708 EREGVQYRDPNIRM 1721
+ N M
Sbjct: 1796 AVPRDELGRSNYGM 1809
Score = 30.8 bits (69), Expect = 6.3
Identities = 46/238 (19%), Positives = 81/238 (34%), Gaps = 81/238 (34%)
Query: 432 MDPQRKALYEYFSALMEPWDGPALISFTDGRYLGATLD--RNGLRPGRFYITH----SGR 485
MD LY+ A + W+ A F D Y + LD N P I H G+
Sbjct: 1633 MD-----LYKTSKAAQDVWNR-ADNHFKD-TYGFSILDIVINN--PVNLTI-HFGGEKGK 1682
Query: 486 VI------MASEVGVVD--IPPEDVLR--------------KGRLN------PGMML--- 514
I M E +VD + E + + KG L+ P + L
Sbjct: 1683 RIRENYSAMIFE-TIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPALTLMEK 1741
Query: 515 --LVDFEKRIVVDDEALKQQY----SLARPYGEW---------LQRQKIELKNIVESIHK 559
D + + ++ +A SL GE+ + ++++VE +
Sbjct: 1742 AAFEDLKSKGLIPADA----TFAGHSL----GEYAALASLADVM-----SIESLVEVVFY 1788
Query: 560 SERVSPGIAGVLPASNDDDNMENMGIHGLLAPLKAFGYTVEALEMLMLPMAKDGTEAL 617
R G+ + D+ N G+ + A ++ EAL+ ++ + K +
Sbjct: 1789 --R---GMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTGWLV 1841
Score = 30.4 bits (68), Expect = 6.5
Identities = 11/48 (22%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Query: 1663 AFEELKKMAIASLNEKSNQEAEQVEPTKRPSRVADAVKHRGFIAYERE 1710
+L++ L E + A EPT V K G+++ E
Sbjct: 29 IASQLQEQFNKILPEPTEGFAADDEPTTPAELVG---KFLGYVSSLVE 73
Score = 30.0 bits (67), Expect = 9.4
Identities = 53/307 (17%), Positives = 92/307 (29%), Gaps = 116/307 (37%)
Query: 40 GRAKAARCAAAKKSTVLER--RFFGNQLRLAGSERV-----HLWRSDGPGKSPKLR---- 88
G AA+ V R F + + + V +L G K ++R
Sbjct: 1632 GMDLYKTSKAAQD--VWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRENYS 1689
Query: 89 -VVVRSALSGVPE-KPLGLYDPKFDKDSCGVGFVAELSGESSRKTITD----ALEMLVRM 142
++ + + G + + + + ++ S F E + T AL L+
Sbjct: 1690 AMIFETIVDGKLKTEKI---FKEINEHSTSYTF----RSEKGLLSATQFTQPAL-TLMEK 1741
Query: 143 AHRGACGCETNTGDGAGILVALPHDFFKEAAKNV-GFQLPPPGEY----AVG--MFFLPQ 195
A L A G L GEY ++ M
Sbjct: 1742 A----------------AFEDLKSKGLIPADATFAGHSL---GEYAALASLADVMSI--- 1779
Query: 196 SENRREESKK-VFTKVAESLGHTVLGWRAVPTDNSGLGNSAL---------------QTE 239
E + VF + G T+ AVP D G N + +
Sbjct: 1780 -----ESLVEVVFYR-----GMTMQ--VAVPRDELGRSNYGMIAINPGRVAASFSQEALQ 1827
Query: 240 PVVEQV------FLTPSLRSKVDF--ENQMYI-------------------LRRVSMAAI 272
VVE+V + V++ ENQ Y+ L+++ + +
Sbjct: 1828 YVVERVGKRTGWLVEI-----VNYNVENQQYVAAGDLRALDTVTNVLNFIKLQKIDIIEL 1882
Query: 273 RESLNLE 279
++SL+LE
Sbjct: 1883 QKSLSLE 1889
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase,
amidotransferase, ammonia assimilation, iron, zymogen;
HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Length = 456
Score = 57.5 bits (140), Expect = 2e-08
Identities = 11/34 (32%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1723 DWKEVMEESKPGPLLKTQSARCMDCGTPFCHQVC 1756
D+ E+ Q+ RC CG PFC C
Sbjct: 2 DFAEIYARFSD-ERANEQANRCSQCGVPFCQVHC 34
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural
genomics, riken structural genomics/P initiative, RSGI;
HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB:
1vcg_A* 3dh7_A*
Length = 332
Score = 52.3 bits (125), Expect = 7e-07
Identities = 64/325 (19%), Positives = 95/325 (29%), Gaps = 60/325 (18%)
Query: 1011 FCTGAMSYGSISLEA-HTTLATAMNKIGGKSNTGEGGEQPSRMEPLSDGSMNPKRSAIKQ 1069
F GAM+ G + E + LA A +G G S L
Sbjct: 61 FLIGAMTGGEENGERINLALAEAAEALGVGMMLG------SGRILLERPE---------- 104
Query: 1070 VASGRFGVSSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDIAVTRNSTAGVGLISPP 1129
A F V + +AQ + G + + + A ++P
Sbjct: 105 -ALRSFRVRKVAPKALLIANLGLAQLRRYGR-------DDLLRLVEMLEADALAFHVNPL 156
Query: 1130 PHHDIYSIEDLAQLIYDLKNANP-GARISVKLVSEAGVGVIASGVVKGHADHVLISGHDG 1188
D L+ L P + VK V A + V ++G G
Sbjct: 157 QEAVQRGDTDFRGLVERLAELLPLPFPVMVKEVGHGLSREAALALRDLPLAAVDVAGA-G 215
Query: 1189 GT-----GASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTILQTDGQLKTGRDVAIAA 1243
GT G E+G+ L ++ L G + TG D A A
Sbjct: 216 GTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLPHLPLVASGGVYTGTDGAKAL 275
Query: 1244 LLGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFMLA 1303
LGA+ + +A P+LR G E V +
Sbjct: 276 ALGADL-------------------------LAVAR--PLLRPALEGA-ERVAAWIGDYL 307
Query: 1304 EELREIMSQLGFRTITEMIGRSDML 1328
EELR + +G R E GR + +
Sbjct: 308 EELRTALFAIGARNPKEARGRVERV 332
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 49.0 bits (116), Expect = 2e-06
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 1636 VAAA---QEAAEDAVKDAEEPD----EADFKEKDAFEELKKMAIASLNEKSNQEAEQVEP 1688
+A A + E K EE E D K +E ++ A L E + +++EQVE
Sbjct: 74 IAQADRLTQEPESIRKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSEQVEK 133
Query: 1689 TKRPSRVADAVKHRGFIAYERE 1710
K +R+AD F + +
Sbjct: 134 NKINNRIADKA----FYQ-QPD 150
Score = 31.7 bits (71), Expect = 1.6
Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 19/68 (27%)
Query: 499 PEDVLRKGRLNPGMMLLVDFEKRIVVDDEALKQQYSLARPYGEWLQRQKIEL----KNIV 554
PE +RK R + KR+ D A K EW ++ K +L +
Sbjct: 84 PE-SIRKWRE--------EQRKRLQELDAASKVMEQ------EWREKAKKDLEEWNQRQS 128
Query: 555 ESIHKSER 562
E + K++
Sbjct: 129 EQVEKNKI 136
Score = 30.9 bits (69), Expect = 2.4
Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 14/54 (25%)
Query: 694 EEMEAIKRMNYRGWR---SKVLDITYSKDHGRRGLEETLDRICAEARDAIKEGY 744
+E E+I++ WR K L D + +A+ ++E
Sbjct: 82 QEPESIRK-----WREEQRKRLQ---ELDAAS---KVMEQEWREKAKKDLEEWN 124
Score = 30.1 bits (67), Expect = 4.5
Identities = 16/90 (17%), Positives = 28/90 (31%), Gaps = 24/90 (26%)
Query: 669 PEGVLTETTEEQCHRLSLKGPLLSIEEMEAIKRMNYRGWRSKVLDITYSKDHGRRGLEET 728
PE + + EEQ RL + + +R K L+ + E
Sbjct: 84 PE-SIRKWREEQRKRLQEL------DAASKVMEQEWREKAKKDLEEWN------QRQSEQ 130
Query: 729 LDRICAEARDAIKEGYTLLVLSDRAFSSKR 758
+++ R A D+AF +
Sbjct: 131 VEKNKINNRIA-----------DKAFYQQP 149
Score = 29.7 bits (66), Expect = 6.3
Identities = 14/92 (15%), Positives = 28/92 (30%), Gaps = 30/92 (32%)
Query: 1565 KFRSRCNPELVDLDKVEEEEDIITLRMMIQQHQRYTNSQLAKEVLADFENLLPKFIKVFP 1624
K+R L +LD + + ++ AK+ L ++
Sbjct: 89 KWREEQRKRLQELDAASKVM----EQEWREK---------AKKDLEEW------------ 123
Query: 1625 RDYKRVLASM-KVAAAQEAAEDAVKDAEEPDE 1655
+R + K A+ A ++PD
Sbjct: 124 --NQRQSEQVEKNKINNRIADKAFY--QQPDA 151
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis,
dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus
subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Length = 349
Score = 39.7 bits (93), Expect = 0.007
Identities = 39/190 (20%), Positives = 64/190 (33%), Gaps = 40/190 (21%)
Query: 1136 SIEDLAQLIYDLKNANPGARISVKLVSEAGVGVIASGVVKGHADHVLISGHDGGTG---- 1191
+++ + Q+ + + VK V A + + A V I G+ GGT
Sbjct: 166 ALKRIEQICSRVS-----VPVIVKEVGFGMSKASAGKLYEAGAAAVDIGGY-GGTNFSKI 219
Query: 1192 -ASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTILQTDGQLKTGRDVAIAALLGAEEF 1250
R + W + A + + + G L+ DVA A LGA
Sbjct: 220 ENLRRQRQISFFNSWGISTAAS--LAEIRSEFPASTMIASGGLQDALDVAKAIALGA--- 274
Query: 1251 GFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFMLAEELREIM 1310
C G+A L+ E ++ ++ EEL+ IM
Sbjct: 275 ----------------SC------TGMAG--HFLKALTDSGEEGLLEEIQLILEELKLIM 310
Query: 1311 SQLGFRTITE 1320
+ LG RTI +
Sbjct: 311 TVLGARTIAD 320
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate
isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Length = 365
Score = 39.4 bits (92), Expect = 0.008
Identities = 36/170 (21%), Positives = 52/170 (30%), Gaps = 36/170 (21%)
Query: 1156 ISVKLVSEAGVGVIASGVVKGHADHVLISGHDGGTGASRWTGIKNAGLP-----WELGLA 1210
+K V + V ISG GGT + I+N + G
Sbjct: 209 FILKEVGFGMDVKTIQTAIDLGVKTVDISGR-GGT---SFAYIENRRGGNRSYLNQWGQT 264
Query: 1211 ETHQTLVANDLRGRTILQTDGQLKTGRDVAIAALLGAEEFGFSTAPLITLGCIMMRKCHK 1270
L A L + + G ++ D+ A +LGA K
Sbjct: 265 TAQVLLNAQPLMDKVEILASGGIRHPLDIIKALVLGA-------------------KA-- 303
Query: 1271 NTCPVGIATQDPVLREKFAGEPEHVINFFFMLAEELREIMSQLGFRTITE 1320
VG++ +L VI E+LR IM L +TI E
Sbjct: 304 ----VGLSR--TMLELVEQHSVHEVIAIVNGWKEDLRLIMCALNCQTIAE 347
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl
diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus
shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A*
3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Length = 368
Score = 38.7 bits (90), Expect = 0.015
Identities = 45/256 (17%), Positives = 80/256 (31%), Gaps = 54/256 (21%)
Query: 1083 TNADELQIKMAQGAKPGEGGELPGHK----VIGDIAVTRNSTAGVGLISPPPHHD--IYS 1136
I + +G L + +I A+ + + P + IY+
Sbjct: 116 VAPTIPIIANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYA 175
Query: 1137 IEDLAQLIYDLKNANPGARISVKLVSEAGVGVIASGVVKGHADHVLISGHDGGT------ 1190
+E L + +L I VK A + + SG GGT
Sbjct: 176 LEKLRDISKELS-----VPIIVKESGNGISMETAKLLYSYGIKNFDTSGQ-GGTNWIAIE 229
Query: 1191 ----GASRWTGIKNAGLPWELGLAETHQTL--VANDLRGRTILQTDGQLKTGRDVAIAAL 1244
++A + G+ T ++ V + ++ G +++G D A A
Sbjct: 230 MIRDIRRGNWKAESAKNFLDWGVP-TAASIMEVRYSVPDSFLV-GSGGIRSGLDAAKAIA 287
Query: 1245 LGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFMLAE 1304
LGA+ G+A PVL+ G+ E + FF +
Sbjct: 288 LGADI-------------------------AGMAL--PVLKSAIEGK-ESLEQFFRKIIF 319
Query: 1305 ELREIMSQLGFRTITE 1320
EL+ M G + +
Sbjct: 320 ELKAAMMLTGSKDVDA 335
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin,
iron-sulfur clusters, pyrimidine catabolism,
5-fluorouracil degradation, oxidoreductase; HET: FMN FAD;
1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1
d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Length = 1025
Score = 38.3 bits (89), Expect = 0.027
Identities = 6/41 (14%), Positives = 15/41 (36%)
Query: 1716 DPNIRMNDWKEVMEESKPGPLLKTQSARCMDCGTPFCHQVC 1756
N++ ++ + ++ RC+ C C + C
Sbjct: 51 HCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSC 91
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty
acid synthase, acyl-carrier-protein, beta-ketoacyl RED
beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces
cerevisiae}
Length = 1688
Score = 36.8 bits (85), Expect = 0.079
Identities = 74/370 (20%), Positives = 119/370 (32%), Gaps = 111/370 (30%)
Query: 771 HHHLVKNLERTRIGLIVESAEPREVHHFCTLV--------G-FGADAICPYLATEAIWRL 821
H ++ N+ R +G + + R + V G FG D + Y
Sbjct: 593 HRIMLTNILRM-MGCVKKQKSARGIETRPAQVILPMSPNHGTFGGDGM--Y--------- 640
Query: 822 QVDGKIPPKASGEFHSK---DELVKKYFKA---SNY--------------GMMK---VLA 858
E SK + L + + + +N G+M ++A
Sbjct: 641 -----------SE--SKLSLETLFNR-WHSESWANQLTVCGAIIGWTRGTGLMSANNIIA 686
Query: 859 ----KMGISTLASYKGAQI-FEALGL-SSEVIEKCFAGTPSRVD---GATF-----EVLA 904
KMG+ T + ++ F LGL + EV+E C +P D G F E A
Sbjct: 687 EGIEKMGVRT---FSQKEMAFNLLGLLTPEVVELC-QKSPVMADLNGGLQFVPELKEFTA 742
Query: 905 SDALHLHELAFPTRILPPGSAEAVALPNPGDYHWRKGGEIHLNDPLAIAKLQEAARGNSV 964
L E + +AV++ ++ G A A+++ R N
Sbjct: 743 KLRKELVETS--------EVRKAVSIETALEHKVVNGNS----ADAAYAQVEIQPRANIQ 790
Query: 965 AAY---KEYSKRIQELNKTCNLRGLLKFKEADVKIPLEEVEPASEIVKRFCTGAMSYGSI 1021
+ K Y + Q L GLL + V EV P R+ ++G
Sbjct: 791 LDFPELKPYKQVKQIAPA--ELEGLLDLERVIVVTGFAEVGPWGSARTRW--EMEAFGEF 846
Query: 1022 SLEAHTTLATAMNKIGGKSNTGEGGEQPSRM-------EPLSDGSMNPK-------RSAI 1067
SLE +A M I + G +P EP+ D + K S I
Sbjct: 847 SLEGCVEMAWIMGFI--SYHNGNLKGRPYTGWVDSKTKEPVDDKDVKAKYETSILEHSGI 904
Query: 1068 KQVASGRFGV 1077
+ + F
Sbjct: 905 RLIEPELFNG 914
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET:
DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A*
1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X*
1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Length = 197
Score = 35.0 bits (80), Expect = 0.12
Identities = 23/115 (20%), Positives = 37/115 (32%), Gaps = 12/115 (10%)
Query: 1607 EVLADFENLLPKFI-KVFPRDYKRVLASMKVAAAQEAAEDAVKDAEEPDEADFKEKDAFE 1665
VLADFE + FP L + E E + ++ K+ F
Sbjct: 13 GVLADFEGGFLRKFRARFPDQPFIALEDRRGFWVSEQYGRLRPGLSEKAISIWESKNFFF 72
Query: 1666 ELKKM--AIASLNE-KSNQEAEQVEPTKRPSRVADAV--------KHRGFIAYER 1709
EL+ + A+ ++ E S Q + T K+ G E+
Sbjct: 73 ELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQ 127
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal
binding protein; NMR {Entamoeba histolytica} SCOP:
a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Length = 134
Score = 32.1 bits (74), Expect = 0.55
Identities = 5/30 (16%), Positives = 10/30 (33%), Gaps = 5/30 (16%)
Query: 1303 AEELREIMSQLGFRTITEMIGRSDMLEVDK 1332
EE+ + G + E + + D
Sbjct: 94 KEEVTSFFKKHGIEKVAEQVM-----KADA 118
>3qtc_A Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP B O-methyl
tyrosine binding, magnesium binding, aminoacylatio
esterification; HET: 0A1 ANP; 1.75A {Methanosarcina
mazei} PDB: 2q7e_A* 2q7g_A* 2q7h_A* 2zim_A* 2zin_A*
2e3c_A* 2zcd_A* 2zce_A* 2zio_A*
Length = 290
Score = 32.9 bits (75), Expect = 0.87
Identities = 20/84 (23%), Positives = 30/84 (35%), Gaps = 13/84 (15%)
Query: 1292 PEHVINFFFMLAEELREIMSQLGFRTI-------TEMIGRSDMLEVDKEVTKTNEKLENI 1344
E N+ L E+ GF I E I R + + D E++K + +
Sbjct: 72 AEERENYLGKLEREITRFFVDRGFLEIKSPILIPLEYIERMGI-DNDTELSKQIFR---V 127
Query: 1345 DLSLLLRPAADLRPEAAQYCVQKQ 1368
D + LRP L P Y +
Sbjct: 128 DKNFCLRP--MLTPNLYNYLRKLD 149
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A
{Arthrobacter SP}
Length = 288
Score = 32.8 bits (75), Expect = 0.98
Identities = 8/49 (16%), Positives = 14/49 (28%), Gaps = 2/49 (4%)
Query: 892 PSRVDGATFEVLASDALHLHELAFPTRILPPGSAEAVAL--PNPGDYHW 938
+ G F + + T G + L P PG + +
Sbjct: 220 SFHIHGNFFHYYPTGTMLTPSEYTDTISQVQGQRGILELRFPYPGKFMF 268
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily,
NYSGXRC, target 9265J, lyase, structural genomics,
PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Length = 455
Score = 32.4 bits (74), Expect = 1.5
Identities = 12/57 (21%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 692 SIEEMEAIKRMNYRGWRSKVLDITYSKDHGRRGLEETLDRICAEARDAIKEGYTLLV 748
+ E A K M + G + + + + D G GL + ++ + + R+A+ + ++V
Sbjct: 169 TGPEPTAAKAMGFWGGK---VPLPFCPDDGHEGLRKNVEFL-RKHREAVGPDFPIMV 221
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid
degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP:
b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*
Length = 452
Score = 31.2 bits (70), Expect = 3.3
Identities = 20/95 (21%), Positives = 31/95 (32%), Gaps = 21/95 (22%)
Query: 1391 ALPVYIETPVCNVNRAVGTMLSHEVTKRYHLVGLPADTIHIKLTGSAGQSVGAFLCPGIL 1450
+ Y N R VG ++ V +G + +H+ G S+GA + G
Sbjct: 112 SRTEYT-QASYNT-RVVGAEIAFLVQVLSTEMGYSPENVHL-----IGHSLGAHVV-G-- 161
Query: 1451 LELEGDSNDYVGKGLSG--GKIVAYPPKGSLFDPK 1483
G+ L G G+I P F
Sbjct: 162 ---------EAGRRLEGHVGRITGLDPAEPCFQGL 187
>1fcd_A Flavocytochrome C sulfide dehydrogenase (flavin- binding subunit);
electron transport(flavocytochrome); HET: FAD HEM; 2.53A
{Allochromatium vinosum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Length = 401
Score = 31.3 bits (71), Expect = 3.5
Identities = 11/60 (18%), Positives = 19/60 (31%), Gaps = 18/60 (30%)
Query: 755 SSKRVAVSSLLAVGA------VHHHLVKNLERTRIGLIVESAEPREVHHFC---TLVGFG 805
+ ++V V VG ++ + LI EP ++ C V G
Sbjct: 1 AGRKVVV-----VGGGTGGATAAKYIKLADPSIEVTLI----EPNTDYYTCYLSNEVIGG 51
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM
barrel, oxidoreductase; HET: MLY FMN; 2.40A
{Streptococcus mutans}
Length = 345
Score = 31.0 bits (70), Expect = 3.6
Identities = 26/210 (12%), Positives = 57/210 (27%), Gaps = 27/210 (12%)
Query: 1135 YSIEDLAQLIYDLKNANPGARISVKLVSEAGVGVIASGVVKGHADHVLISGHDGGTGASR 1194
S E+ ++ ++ + + + L G D +L +
Sbjct: 138 MSPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQIL------SEVFTY 191
Query: 1195 WTGIKNAGLPWELGLAETHQTLVANDLRGRTILQTDGQLKTGRDVAIAAL---LGAEEFG 1251
+T LP + Q + T + + G + + G
Sbjct: 192 FTKPLGIKLPPYFDIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGG 251
Query: 1252 FSTAPLITLGCIMMRKCHKNT---CPV----GIATQDPVLREKF-AG---------EPEH 1294
+ + +K + G+ T E G +
Sbjct: 252 IGGDYVKPTALANVHAFYKRLNPSIQIIGTGGVXTGRDAF-EHILCGASMVQIGTALHQE 310
Query: 1295 VINFFFMLAEELREIMSQLGFRTITEMIGR 1324
F + +EL IM++ G+ T+ + G+
Sbjct: 311 GPQIFKRITKELXAIMTEKGYETLEDFRGK 340
>3mwd_A ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid,
lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB:
3mwe_A*
Length = 425
Score = 31.1 bits (71), Expect = 4.2
Identities = 13/97 (13%), Positives = 27/97 (27%), Gaps = 26/97 (26%)
Query: 463 YLGATLDRNGLRPGRFYITHSGRVIMASEVGVVDIPPEDVLRKGRLNPGMMLLVDFEKRI 522
Y+ R G ++ G VD+ DV K + +
Sbjct: 120 YVCIYATR------------EGDYVLFHHEGGVDV--GDVDAK---AQ--------KLLV 154
Query: 523 VVDDEALKQQYSLARPYGEWLQRQKIELKNIVESIHK 559
VD++ + + +K L + + +
Sbjct: 155 GVDEKLNPEDIK-KHLLVHAPEDKKEILASFISGLFN 190
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas,
glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP:
b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A
Length = 432
Score = 30.7 bits (69), Expect = 4.2
Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 7/56 (12%)
Query: 1391 ALPVYIETPVCNVNRAVGTMLSHEVTKRYHLVGLPADTIHIKLTGSAGQSVGAFLC 1446
+ Y N+ R VG +++ V + + +HI G S+GA
Sbjct: 112 SKAQYS-QASQNI-RVVGAEVAYLVQVLSTSLNYAPENVHI-----IGHSLGAHTA 160
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 29.5 bits (65), Expect = 5.2
Identities = 10/43 (23%), Positives = 14/43 (32%), Gaps = 15/43 (34%)
Query: 427 QNDKNMDPQRKALYEYFSALMEPWDGPALISFTDGRYLGATLD 469
Q K + K LY PAL + AT++
Sbjct: 20 QALKKLQASLK-LYA-------DDSAPALA-------IKATME 47
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine
biosynthesis, fumarate reductase, energy metabolism,
redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A
{Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A*
2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Length = 314
Score = 30.2 bits (69), Expect = 6.8
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 1302 LAEELREIMSQLGFRTITEMIGRSDMLE 1329
L +EL EIM++ G+RT+ E GR +E
Sbjct: 287 LEDELLEIMARKGYRTLEEFRGRVKTIE 314
>4a15_A XPD helicase, ATP-dependent DNA helicase TA0057; hydrolase,
nucleotide excision repair,; 2.20A {Thermoplasma
acidophilum} PDB: 2vsf_A*
Length = 620
Score = 30.1 bits (68), Expect = 7.6
Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 4/71 (5%)
Query: 1302 LAEELREIMSQLGFRTITEMIGRSDML---EVDKEVTKTNEKLENIDLSLLLRPAADLRP 1358
+ +ELR + S + R I M GR +M + ++ + N + ++ R
Sbjct: 67 VIKELRSLSSTMKIRAIP-MQGRVNMCILYRMVDDLHEINAESLAKFCNMKKREVMAGNE 125
Query: 1359 EAAQYCVQKQD 1369
A Y K
Sbjct: 126 AACPYFNFKIR 136
>1vpr_A Luciferase; beta barrel, fatty acid binding protein, lipocalin, PH
regulation, luminescent protein; 1.80A {Lingulodinium
polyedrum} SCOP: b.60.1.7
Length = 374
Score = 30.1 bits (67), Expect = 7.8
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 1203 LPWELGLAETHQTLVANDLRGRTILQTDGQLKTGRDVAIAALLGAEE 1249
LPW GL E N L GR I + GQ ++ + +LGA E
Sbjct: 143 LPWPAGLPEPGYVPKTNPLHGRWITVSGGQAAFIKEAIKSGMLGAAE 189
>2a0b_A HPT domain; sensory transduction, histidine kinase, phosphotransfer,
two-component system, four-helix bundle; 1.57A
{Escherichia coli} SCOP: a.24.10.1 PDB: 1bdj_B 1fr0_A
1a0b_A
Length = 125
Score = 28.4 bits (63), Expect = 9.0
Identities = 21/115 (18%), Positives = 46/115 (40%), Gaps = 18/115 (15%)
Query: 1578 DKVEEEEDIITLRMMIQQHQRYTNSQLAKEVLADFENLLPKFIKVF-----PRDYKRVLA 1632
++ + E ++ + M ++Q+ +L + LA FE ++P ++ V +D K ++
Sbjct: 3 EENSKSEALLDIPM-LEQYLELVGPKLITDGLAVFEKMMPGYVSVLESNLTAQDKKGIVE 61
Query: 1633 ---SMKVAAA-------QEAAEDAVKDAEEPDEADFKEKDAFEELKKMAIASLNE 1677
+K AA Q+ + E + E EE+K+ +
Sbjct: 62 EGHKIKGAAGSVGLRHLQQLGQQIQSPDLPAWEDNVGEW--IEEMKEEWRHDVEV 114
>2zt5_A Glycyl-tRNA synthetase; ligase, AP4A, glycine, ATP, Gly-AMP,
aminoacyl-tRNA synthetase, ATP-binding,
charcot-marie-tooth disease, disease mutation; HET: B4P;
2.50A {Homo sapiens} PDB: 2pme_A* 2zt6_A* 2zt7_A* 2zt8_A*
2zxf_A* 2pmf_A 2q5h_A 2q5i_A
Length = 693
Score = 30.0 bits (67), Expect = 9.1
Identities = 18/80 (22%), Positives = 29/80 (36%), Gaps = 4/80 (5%)
Query: 1626 DYKRVLASMKVAAAQEAAEDAVKDAEEPDEADFKEKDAFEELKKMAIASLNEKSNQEAEQ 1685
+ VLA ++ A D V+ +E A ELK L K +
Sbjct: 5 GAEEVLAPLR--LAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRV-LEAKELALQPK 61
Query: 1686 VEPTKRPSRVADAVKHRGFI 1705
+ R +++ D +K R F
Sbjct: 62 DDIVDR-AKMEDTLKRRFFY 80
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel,
flavoprotein, mutant enzyme, oxidoreductase; HET: FMN;
1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A*
1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A*
1jrc_A* 1jqx_A*
Length = 311
Score = 29.5 bits (67), Expect = 9.1
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 1299 FFMLAEELREIMSQLGFRTITEMIGR 1324
F + +EL EIM+Q G+++I + G+
Sbjct: 282 FDRIIKELEEIMNQKGYQSIADFHGK 307
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active
site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus
scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B*
2fpp_B* 1euc_B* 1eud_B*
Length = 395
Score = 29.8 bits (68), Expect = 9.5
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 12/40 (30%)
Query: 463 YLGATLDRNGLRPGRFYITHSGRVIMASEVGVVDIPPEDV 502
YL +DR+ P V++ S G VDI E+V
Sbjct: 116 YLAILMDRSCNGP----------VLVGSPQGGVDI--EEV 143
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.317 0.134 0.391
Gapped
Lambda K H
0.267 0.0686 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 27,741,175
Number of extensions: 1827610
Number of successful extensions: 4803
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4720
Number of HSP's successfully gapped: 74
Length of query: 1760
Length of database: 6,701,793
Length adjustment: 107
Effective length of query: 1653
Effective length of database: 3,714,246
Effective search space: 6139648638
Effective search space used: 6139648638
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (28.5 bits)