Your job contains 1 sequence.
>000270
MALRKYIPSADAPSGTMKPLSFSSKVHENAQLAGSDTSQPAELDVDVDLREVYFLIMHFL
STGPCHRTYGQFWNELLEHQLLPRRYHAWYSRSGLPSGDENDDGMSFPLSYNKLVERYPH
IEKDHLVKLLKQLIINTSSPSRAMIGGDAPNAADVPTLLGRGSFSLLSYDRDKGQNEIDH
PPAHMRWPHMYADQVRGLGLREIGGGFTRHHRAPSIRAACYAIAKPSTMVQKMQNIKRVR
GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNALV
ASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR
YSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWN
ACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTPKFKNSWFC
HDNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVPPPPMPPQPPRGGPRQRILPTP
RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS
AGYDGKTIVWDIWEGIPIRIYEISRFRDGASIILSDDVGQLYILNTGQGESQKDAKYDQF
FLGDYRPLVQDTYGNVLDQETQLAPHRRNLQDPLCDSAMIPYPEPYQTMYQQRRLGALGI
EWRPSSLKLAVGPDFSLDQGYQLQPLADLDVMIDPLPEFIDVMDWEPENEVQSDDNDSEY
NVAEEYSTEEKGSLSSTSSGDSECSAEDSEDGENPMDGLRRSKRKKQKAEVEIMTSSGRR
VKRRILDESEGNAAFGNKRTRKSGNRQKSSRRKSSTSKSLRPQRAAARNARSFFSKITGA
STDGEDVDGSEGELSESESDLQDSYIESEESGRSLLNEQRKHSKGKGISLDDSEDVTKLD
TPESHVNAGIRRLVLKLPVRDSNKHELQERTSDKCNQLVSVIGTSSEAHQEATEGNGNRV
SYVGNNCSSVDANCGLMERRGRGQFDKLEDYLNLSNGYKDGKIRWGGVRARSSKRLKIGE
MMPLDANNGSGIHLDDDKEKESEVNGHVKPEKDGIDISCGEEITNCGDNTDEVPLKNVKN
LSGENNDVYSGDASCKEQQSGFSELNYYDESKCVNTTDEDTTPYPNHLQNGTIQPSELKE
ILTPVSTKLRIRSKRILRDADVENQNNGCDALHGSSLDIKPNSLPEVLESDGTNRTSSDR
GADGSQRLNAQIDSTSEHDPLGSHSHSHDPLGSHSHSHSRKMFNVVYRRSKTNRDRTNSE
GDGGGVGESTLNANNNNFHESATDGSRRTRSMGLKTTTCDPDNVSSNLRLEQHNQPEDMY
SGHNRSTSRCQLPHEEWGSSSKMTVGLRSTRNRRTSYLFCDSSPIDRRKTHQSLRKGSWL
MLSTHEEGSRYIPQLGDEVVYLRQGHQEYINYSGSREVGPWITVKGNIRAVEFCKVESLE
YATASGSGDSCCKMTLKFIDPTSSVSNMTFRLTLPEVTGFPDFLVERTRFDAAIQRNWTC
RDKCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPTETHLHSPWEL
FDSDTQWEQPRIDDDNRNKLLSAFAKLEQSANRVQDQYGVQKLKQVSQKTNFTNRFPVPL
SLDVIQSRLENNYYRGLEAVKHDIAVMLSNAESYFGRNTDLSTKIKRLSDLVTRTLSSLK
APQFHDVGQ
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000270
(1749 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2158044 - symbol:AT5G49430 "AT5G49430" species... 3346 0. 1
TAIR|locus:2061997 - symbol:AT2G47410 "AT2G47410" species... 3075 0. 3
UNIPROTKB|E1BSG1 - symbol:BRWD1 "Uncharacterized protein"... 312 5.7e-75 6
RGD|1559445 - symbol:Brwd3 "bromodomain and WD repeat dom... 315 2.1e-70 6
FB|FBgn0011785 - symbol:BRWD3 "BRWD3" species:7227 "Droso... 309 1.3e-69 4
DICTYBASE|DDB_G0285837 - symbol:DDB_G0285837 "BRWD group ... 270 8.8e-55 7
MGI|MGI:1890651 - symbol:Brwd1 "bromodomain and WD repeat... 343 4.6e-54 4
RGD|1309030 - symbol:Brwd1 "bromodomain and WD repeat dom... 343 1.8e-52 5
UNIPROTKB|Q9NSI6 - symbol:BRWD1 "Bromodomain and WD repea... 336 3.7e-52 4
UNIPROTKB|Q8WWQ0 - symbol:PHIP "PH-interacting protein" s... 351 8.9e-51 5
UNIPROTKB|F1MTQ0 - symbol:BRWD1 "Uncharacterized protein"... 335 1.2e-50 5
MGI|MGI:1932404 - symbol:Phip "pleckstrin homology domain... 349 1.2e-50 4
ZFIN|ZDB-GENE-050208-261 - symbol:phip "pleckstrin homolo... 322 2.3e-50 5
UNIPROTKB|Q6RI45 - symbol:BRWD3 "Bromodomain and WD repea... 311 1.4e-48 4
MGI|MGI:3029414 - symbol:Brwd3 "bromodomain and WD repeat... 314 7.2e-48 5
UNIPROTKB|F1NXP9 - symbol:PHIP "Uncharacterized protein" ... 350 4.9e-46 2
ZFIN|ZDB-GENE-041111-120 - symbol:brwd1 "bromodomain and ... 326 2.9e-45 5
UNIPROTKB|F1MPF7 - symbol:PHIP "Uncharacterized protein" ... 351 3.0e-45 3
UNIPROTKB|F1N8L6 - symbol:BRWD3 "Uncharacterized protein"... 324 2.7e-44 4
UNIPROTKB|F1N1C9 - symbol:BRWD3 "Uncharacterized protein"... 311 9.7e-43 3
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 159 4.8e-16 3
RGD|1564964 - symbol:Phip "pleckstrin homology domain int... 237 3.3e-15 2
SGD|S000000668 - symbol:RSA4 "WD-repeat protein involved ... 160 2.1e-14 2
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 184 3.4e-14 2
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 158 8.4e-14 3
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 158 8.4e-14 3
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 182 1.1e-13 2
POMBASE|SPCC5E4.03c - symbol:taf5 "SAGA complex subunit/T... 203 1.6e-13 2
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 175 3.4e-13 2
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 174 3.5e-13 2
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 177 3.7e-13 2
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 168 6.3e-13 3
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 190 7.0e-13 2
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 173 7.9e-13 3
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 171 9.5e-13 2
ZFIN|ZDB-GENE-051120-180 - symbol:taf5 "TAF5 RNA polymera... 183 2.3e-12 3
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 169 2.5e-12 2
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 169 4.4e-12 2
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 169 4.4e-12 2
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 169 4.4e-12 2
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 169 4.4e-12 2
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 169 4.4e-12 2
UNIPROTKB|G4NFU5 - symbol:MGG_08708 "WD repeat-containing... 200 4.9e-12 1
UNIPROTKB|E1C4U3 - symbol:E1C4U3 "Uncharacterized protein... 182 5.2e-12 2
WB|WBGene00015974 - symbol:C18E3.5 species:6239 "Caenorha... 150 8.5e-12 2
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 169 8.9e-12 2
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 145 1.1e-11 2
POMBASE|SPAC227.12 - symbol:SPAC227.12 "U4/U6 x U5 tri-sn... 160 1.2e-11 2
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 165 1.2e-11 2
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 153 1.3e-11 3
UNIPROTKB|F1S845 - symbol:TAF5 "Uncharacterized protein" ... 182 1.5e-11 2
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 145 1.6e-11 2
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 143 2.7e-11 2
UNIPROTKB|B3KPU1 - symbol:GNB2 "Guanine nucleotide-bindin... 157 3.8e-11 2
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 143 4.4e-11 2
UNIPROTKB|Q9NVX2 - symbol:NLE1 "Notchless protein homolog... 141 4.4e-11 2
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 144 4.5e-11 2
RGD|1311332 - symbol:Taf5 "TAF5 RNA polymerase II, TATA b... 182 4.7e-11 2
UNIPROTKB|E1BEN8 - symbol:TAF5 "Uncharacterized protein" ... 182 4.7e-11 2
UNIPROTKB|Q15542 - symbol:TAF5 "Transcription initiation ... 182 4.7e-11 2
UNIPROTKB|E2RE41 - symbol:TAF5 "Uncharacterized protein" ... 182 4.7e-11 2
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 151 5.5e-11 2
UNIPROTKB|G4MRA1 - symbol:MGG_04693 "WD repeat-containing... 166 6.9e-11 2
FB|FBgn0030011 - symbol:Gbeta5 "Gbeta5" species:7227 "Dro... 165 7.8e-11 2
RGD|1359321 - symbol:Gnb4 "guanine nucleotide binding pro... 163 7.9e-11 2
MGI|MGI:2442144 - symbol:Taf5 "TAF5 RNA polymerase II, TA... 179 9.8e-11 2
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 152 1.1e-10 2
TAIR|locus:2176897 - symbol:AT5G52820 "AT5G52820" species... 146 1.3e-10 2
MGI|MGI:104581 - symbol:Gnb4 "guanine nucleotide binding ... 163 1.3e-10 2
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 151 1.4e-10 2
ZFIN|ZDB-GENE-040718-126 - symbol:wdr83 "WD repeat domain... 155 1.6e-10 2
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 141 1.6e-10 2
TAIR|locus:2060560 - symbol:LIS "AT2G41500" species:3702 ... 162 1.8e-10 2
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 156 1.8e-10 2
UNIPROTKB|Q93794 - symbol:sel-10 "F-box/WD repeat-contain... 156 1.8e-10 2
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 137 1.9e-10 3
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 146 2.0e-10 3
UNIPROTKB|E7EP32 - symbol:GNB2 "Guanine nucleotide-bindin... 157 3.4e-10 2
POMBASE|SPBC354.03 - symbol:swd3 "WD repeat protein Swd3"... 148 3.7e-10 2
TAIR|locus:2148965 - symbol:TOZ "AT5G16750" species:3702 ... 159 3.8e-10 3
ASPGD|ASPL0000005389 - symbol:sconB species:162425 "Emeri... 173 3.9e-10 2
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 154 4.4e-10 2
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 154 4.4e-10 2
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 154 4.4e-10 2
SGD|S000001308 - symbol:MET30 "F-box protein containing f... 165 5.1e-10 3
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 154 5.5e-10 2
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 154 5.7e-10 3
ZFIN|ZDB-GENE-041114-104 - symbol:tbl3 "transducin (beta)... 170 6.1e-10 3
POMBASE|SPAC18B11.10 - symbol:tup11 "transcriptional core... 180 7.0e-10 2
UNIPROTKB|Q9HAV0 - symbol:GNB4 "Guanine nucleotide-bindin... 160 7.2e-10 2
WB|WBGene00001680 - symbol:gpb-2 species:6239 "Caenorhabd... 160 7.2e-10 2
DICTYBASE|DDB_G0295761 - symbol:nle1 "putative notchless"... 137 7.3e-10 2
POMBASE|SPBC1289.11 - symbol:spf38 "splicing factor Spf38... 138 7.3e-10 2
UNIPROTKB|P11017 - symbol:GNB2 "Guanine nucleotide-bindin... 157 7.7e-10 2
UNIPROTKB|E2RD95 - symbol:GNB2 "Uncharacterized protein" ... 157 7.7e-10 2
UNIPROTKB|P62879 - symbol:GNB2 "Guanine nucleotide-bindin... 157 7.7e-10 2
MGI|MGI:95784 - symbol:Gnb2 "guanine nucleotide binding p... 157 7.7e-10 2
RGD|69319 - symbol:Gnb2 "guanine nucleotide binding prote... 157 7.7e-10 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 202 8.2e-10 2
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 151 9.9e-10 2
WARNING: Descriptions of 462 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2158044 [details] [associations]
symbol:AT5G49430 "AT5G49430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0080008 KO:K11797 IPI:IPI00523511
RefSeq:NP_199754.2 UniGene:At.51087 ProteinModelPortal:F4K639
PRIDE:F4K639 EnsemblPlants:AT5G49430.1 GeneID:835003
KEGG:ath:AT5G49430 OMA:CCAFNAN Uniprot:F4K639
Length = 1677
Score = 3346 (1182.9 bits), Expect = 0., P = 0.
Identities = 732/1390 (52%), Positives = 891/1390 (64%)
Query: 1 MALRKYIPSADAPSGTMKPLSFSSKVHENAQLAGSDTSQPAELDVDVDLREVYFLIMHFL 60
MALRK P D+ S MKPL+FS K+ N Q+ D Q ++D+DLREVYFL++H L
Sbjct: 1 MALRKNTPKGDSVSLPMKPLNFSRKLPGNVQIPDPDIVQSVAPNIDLDLREVYFLMLHLL 60
Query: 61 STGPCHRTYGQFWNELLEHQLLPRRYHAWYSRSGLPSGDENDDGMSFPLSYNKLVERYPH 120
S+GPC +TY +ELLEH+LLPRRYHAWYSRSGLPSGDENDDG SFPL+Y +L +RY H
Sbjct: 61 SSGPCQKTYALLRHELLEHELLPRRYHAWYSRSGLPSGDENDDGNSFPLNYTELAKRYSH 120
Query: 121 IEKDHLVKLLKQLII--NTSSPSRAMIGGDAPNAADVPTLLGRGSFSLLSYDRDKGQNEI 178
++KDHLV+LLKQL+ N +PSR + G+ A VPTLLG GSFSLLS D++ +++
Sbjct: 121 VKKDHLVELLKQLVFVSNRPNPSRGIGDGNKMIGAGVPTLLGTGSFSLLSSDKEIVGSDL 180
Query: 179 DHPPAHMRWPHMYADQVRGLGLREIGGGFTRHHRAPSIRAACYAIAKPSTMVQKMQNIKR 238
PP MRWPHM+ADQVRG+ LREIGGGF RHHRAPSIRAACY IAKPS+MVQKMQNIKR
Sbjct: 181 KPPPIGMRWPHMHADQVRGISLREIGGGFARHHRAPSIRAACYVIAKPSSMVQKMQNIKR 240
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+RGHRNAVYCAI DRSGRYVITGSDDRLVK+WSM+TAYCLASCRGHEGDITD
Sbjct: 241 LRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNI 300
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
DC+IRVWRLPDGLP+SVLRGHT AVTAIAFSPRPGS YQLLSSSDDGTCRIWD
Sbjct: 301 FIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWD 360
Query: 359 ARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARV 418
AR +QF+PRIY+PRP G+N PSSS QSHQIFCCAFNA+G+VFVTGSSDTLARV
Sbjct: 361 ARGAQFAPRIYVPRPPSP-DGKNSGPSSSNAQQSHQIFCCAFNASGSVFVTGSSDTLARV 419
Query: 419 ---WNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTPKFK 475
W+A K NTDD +QPNHE+DVL+GHENDVNYVQFSGCA S+FS+ D SK+++ PKFK
Sbjct: 420 YSVWSANKTNTDDPEQPNHEMDVLAGHENDVNYVQFSGCAAGSKFSVTDYSKDENVPKFK 479
Query: 476 NSWFCHDNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVXXXXXXXXXXXXXXXXX 535
NSWFCHDNIVTCSRDGSAIIWIPR RRSH K+ RWT+AYHLKV
Sbjct: 480 NSWFCHDNIVTCSRDGSAIIWIPRLRRSHGKSCRWTRAYHLKVPPPPMPPQPPRGGPRQR 539
Query: 536 ILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNP 595
ILPTPRGVNMI WSLDNRFVLAAIMDCRICVWNA+DGSLVHSLTGHT STYV+DVHPFNP
Sbjct: 540 ILPTPRGVNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNP 599
Query: 596 RIAMSAGYDGKTIVWDIWEGIPIRIYEISRFR--------DGASIILSDDVGQLYILNTG 647
RIAMSAGYDGKTIVWDIWEGIPI+IY+IS ++ DG SIILSDDVGQLYIL+TG
Sbjct: 600 RIAMSAGYDGKTIVWDIWEGIPIQIYDISHYKLVDGKFSPDGTSIILSDDVGQLYILSTG 659
Query: 648 QGESQKDAKYDQFFLGDYRPLVQDTYGNVLDQETQLAPHRRNLQDPLCDSAMIPYPEPYQ 707
QG+SQKDAKYDQFFLGDYRPL+QDTYGNVLDQE+QL P+RRN++DPLCDS MIPY EPYQ
Sbjct: 660 QGDSQKDAKYDQFFLGDYRPLIQDTYGNVLDQESQLQPYRRNMEDPLCDSGMIPYEEPYQ 719
Query: 708 TMYQQRRLGALGIEWRPSSLKLAVGPDFSLDQGYQLQPLADLDVMIDPLPEFIDVMDWEP 767
T +Q+RRLGALG EWRPSSLKLAVGPD +LD+ YQ+ PLADLD + +PLPEFIDVM+WEP
Sbjct: 720 TTFQKRRLGALGKEWRPSSLKLAVGPDITLDRDYQMPPLADLD-LAEPLPEFIDVMEWEP 778
Query: 768 ENEVQSDDNDSEYNVAEEYXXXXXXX-XXXXXXXXXXXXXXDSEDGENPMDGLRRSKRKK 826
E ++ SD+NDSEYNV EEY +S + ++ + LRRSKRKK
Sbjct: 779 EVDILSDENDSEYNVPEEYSSGKEQECLNSSTSGESGSSSGESYEDDDHQNSLRRSKRKK 838
Query: 827 QKAEVEIMTSSGRRVKRRILDESEGNAAFGNKRTXXXXXXXXXXXXXXXXXXXLRPQXXX 886
K E IMTSSGRRVK+R DE EG A KRT RP+
Sbjct: 839 HKKEAGIMTSSGRRVKKRNFDELEG-APSNKKRTRKSRSGRKESKRKSSKSKSSRPRRAA 897
Query: 887 XXXXXSFFSKITGASTXXXXXXXXXXXXXXXXXXXXXXYIESE-ESGRSLLNEQRKHSKG 945
S+FSKITG S + E +LLN K SKG
Sbjct: 898 ARNALSWFSKITGTSKDAEEEEVSELSDSSESESTTQDSGTGDSELEVALLNGHGKQSKG 957
Query: 946 KGISLDDSED-VTKLDTPESHVNAGIRRLVLKLPVRDSNKHELQERT-SDKCNQLVSVIG 1003
K I + DS+D + D E+H A RRLVL+ PVR+S+K L E C+ +G
Sbjct: 958 KTILVCDSDDGAQQCDIRETHT-AERRRLVLRFPVRNSDKLTLLENLPGSSCDVPSPTLG 1016
Query: 1004 TSSEAHQEATEGNGNRVSYVGNNCSSVDANCGLME----RRGRGQFDKLEDYLNLS---- 1055
E + GN+ + G + S V G+++ +R RG+ + +
Sbjct: 1017 NGCT---EDSRIPGNQ--FEGLDVSKV--KWGMVKARTTKRIRGEAISSHELMGSDPEGK 1069
Query: 1056 -NGYK-DGKIRWGGVRARSSKRLKIG-EMMPLDANNGSGIHLDDDKEKESEVNGHVKPEK 1112
N K D R GV A S LK + M +D + L + ++ E++G
Sbjct: 1070 ENNVKEDSNHRGNGVTAPSCLELKTDIDDMAVDTDTVISNGLPNGGKRYPELDGSPSRVA 1129
Query: 1113 DGIDISCGEEITNCGDNTDEVP-LKNVKNLSGENNDVYSGDASCKEQQSGFSELNYYDES 1171
D + + +T+ D D +P + + + + D S +++ S S
Sbjct: 1130 DDKASNSSQNVTHRHDLIDSLPPISTTLKIRSKRVS-RAPDTSLRQEGKSLSIDQETGGS 1188
Query: 1172 KCVNTTDEDTTPYPNHLQNGTIQPSELKEILTPVSTKLRIRSKRILRDADVENQNNGCDA 1231
+N ED + T+ K+ + V T++ +R+ D +E CDA
Sbjct: 1189 DALNDGFEDAKC------DLTLDCQ--KDGV--VGTEISLRN-----DCVLELNPQICDA 1233
Query: 1232 LHGSSLDIK-PNSLPEVLESDGTNRTSSDRGADGSQRLNAQIDSTSEHDPLGSHSHSHDP 1290
L ++ D+ +S P+ + D R S + + R +A + T E P GS S H
Sbjct: 1234 LSIAN-DVPVSHSHPKRM-FDFVYRRKSRKHKNNLDR-DAAL--TKEVSP-GSCSQDHGS 1287
Query: 1291 LGSHSHSHSRKMFNVVYRRS--KTNRDRTNSEGDGGGVGESTLNANNNNFHESATDGSRR 1348
GS SH + F+ K+ T+ + + +S N N+ SA+ + R
Sbjct: 1288 -GSKSHEGASNGFHGTELNGLEKSEGSLTHIQDK---ISDSRGNQNSQEELRSASGATLR 1343
Query: 1349 TRSMGLKTTT 1358
RS + +T
Sbjct: 1344 LRSTRNRKST 1353
Score = 1381 (491.2 bits), Expect = 3.4e-141, P = 3.4e-141
Identities = 292/567 (51%), Positives = 381/567 (67%)
Query: 1186 NHLQNGTIQPSELKEILTPVSTKLRIRSKRILRDADVENQNNG----CDALHGSSLDIKP 1241
N QN T + +L + L P+ST L+IRSKR+ R D + G D G S D
Sbjct: 1135 NSSQNVTHR-HDLIDSLPPISTTLKIRSKRVSRAPDTSLRQEGKSLSIDQETGGS-DALN 1192
Query: 1242 NSLPEVLESDGTNRTSSDRGADGSQRLNAQIDSTSEHDP--LGSHSHSHD-PLGSHSHSH 1298
+ + + D T D G G++ ++ + D E +P + S ++D P+ SHSH
Sbjct: 1193 DGFEDA-KCDLTLDCQKD-GVVGTE-ISLRNDCVLELNPQICDALSIANDVPV---SHSH 1246
Query: 1299 SRKMFNVVYRRSKTNRDRTNSEGDGGGVGE------STLNANNNNFHESATDGSRRTRSM 1352
++MF+ VYRR K+ + + N + D E S + + + HE A++G T
Sbjct: 1247 PKRMFDFVYRR-KSRKHKNNLDRDAALTKEVSPGSCSQDHGSGSKSHEGASNGFHGTELN 1305
Query: 1353 GLKTTTCDPDNVSSNLRLEQHNQPEDMYSGHNRSTSRCQLPHEEWGSSSKMTVGLRSTRN 1412
GL+ + +L H Q D S +R Q EE S+S T+ LRSTRN
Sbjct: 1306 GLEKS-------EGSLT---HIQ--DKISD-SRGNQNSQ---EELRSASGATLRLRSTRN 1349
Query: 1413 RRTSYLFCDSSPIDRRKTHQSLRKGSWLMLSTHEEGSRYIPQLGDEVVYLRQGHQEYINY 1472
R+++Y F ++ PI+ +K Q + SWL LS HEEGSRYIPQ+GDEV YLRQGHQEY+N+
Sbjct: 1350 RKSTYPFSETKPIETKKPQQLIENVSWLTLSIHEEGSRYIPQMGDEVAYLRQGHQEYLNF 1409
Query: 1473 SGSREVGPWITVKG-NIRAVEFCKVESLEYATASGSGDSCCKMTLKFIDPTSSVSNMTFR 1531
S REV PW ++KG NI+AVE CKVESLEYAT GSGDSCCKM LK IDP S V N F+
Sbjct: 1410 SSLREVAPWTSIKGGNIKAVEICKVESLEYATLPGSGDSCCKMILKVIDPNSEVFNKAFK 1469
Query: 1532 LTLPEVTGFPDFLVERTRFDAAIQRNWTCRDKCKVWWKNESDEDGSWWDGRVLSVKPKSS 1591
LTLPEV FPDFLVER+R++AAIQRNWTCRDKCKVWW++E +EDGSWW+GR+L+VKPKS
Sbjct: 1470 LTLPEVVTFPDFLVERSRYEAAIQRNWTCRDKCKVWWRDEGEEDGSWWEGRILAVKPKSP 1529
Query: 1592 EFPDSPWERYTVQYKTEPTETHLHSPWELFDSDTQWEQPRIDDDNRNKLLSAFAKLEQSA 1651
+FPDSPWERYTV+YK++P ETHLHSPWELFD+DT+WEQP IDD+ RN+LLSA KLE S
Sbjct: 1530 DFPDSPWERYTVKYKSDPAETHLHSPWELFDADTKWEQPHIDDEQRNRLLSALTKLETSD 1589
Query: 1652 NRVQDQYGVQKLKQVSQKTNFTNRFPVPLSLDVIQSRLENNYYRGLEAVKHDIAVMLSNA 1711
R QD +G++KL Q ++++NRFPVPLSL+VI+SRLENNYYR +EA++HD++VMLSNA
Sbjct: 1590 KRTQDSFGLRKLNQTVGNSSYSNRFPVPLSLEVIRSRLENNYYRSVEALRHDVSVMLSNA 1649
Query: 1712 ESYFGRNTDLSTKIKRLSDLVTRTLSS 1738
E++FGRN ++ KI LS+ RTL S
Sbjct: 1650 ETFFGRNKSVAAKISNLSNWFDRTLPS 1676
>TAIR|locus:2061997 [details] [associations]
symbol:AT2G47410 "AT2G47410" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0009630 "gravitropism"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
EMBL:CP002685 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0080008
KO:K11797 IPI:IPI00537086 RefSeq:NP_850474.3 UniGene:At.36365
ProteinModelPortal:F4IL43 PRIDE:F4IL43 EnsemblPlants:AT2G47410.1
GeneID:819354 KEGG:ath:AT2G47410 OMA:CDSSMIP Uniprot:F4IL43
Length = 1520
Score = 3075 (1087.5 bits), Expect = 0., Sum P(3) = 0.
Identities = 594/894 (66%), Positives = 679/894 (75%)
Query: 17 MKPLSFSSKVHENAQLAGSDTSQPAELDVDVDLREVYFLIMHFLSTGPCHRTYGQFWNEL 76
M+P + + V N L D S + D+D+DLREVYFLI+HFLS GPC RT+G +E+
Sbjct: 11 MEPSNLAKLVQGNVPLQPHD-SHSSLTDLDMDLREVYFLILHFLSIGPCERTFGHLRDEI 69
Query: 77 LEHQLLPRRYHAWYSRSGLPSGDENDDGMSFPLSYNKLVERYPHIEKDHLVKLLKQLIIN 136
LE LLPRRYH+W+SRSG+ SG +DDG+S PLSY+ L+ERYPHIEKDHLVKLLKQLI+N
Sbjct: 70 LEKGLLPRRYHSWWSRSGIYSGRADDDGISLPLSYDNLIERYPHIEKDHLVKLLKQLILN 129
Query: 137 TSSPSRAMIGGDAPNAADVPTLLGRGSFSLLSYDRDKGQNEIDHPPAHMRWPHMYADQVR 196
S PS + G+APNAADVPTLLG G+FSL+ + + H +++RWPHM+ADQVR
Sbjct: 130 PSFPSHMRVEGNAPNAADVPTLLGSGTFSLVDRSNNIESQKARHVASYLRWPHMHADQVR 189
Query: 197 GLGLREIGGGFTRHHRAPSIRAACYAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGR 256
GL LREIGGGF +HHRAPSI +AC+AIAKPSTMVQKMQNIK++RGHRNAVYCAIFDRSGR
Sbjct: 190 GLSLREIGGGFRKHHRAPSILSACHAIAKPSTMVQKMQNIKKLRGHRNAVYCAIFDRSGR 249
Query: 257 YVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPD 316
YVITGSDDRLVKIWSMETA CLASCRGHEGDITD D +IRVWRLPD
Sbjct: 250 YVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVASASNDFVIRVWRLPD 309
Query: 317 GLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDA 376
G+PISVLRGHT AVTAIAFSPR SVYQLLSSSDDGTCRIWDARYSQ+ PRIY+P PSDA
Sbjct: 310 GMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYSQWLPRIYVPSPSDA 369
Query: 377 VAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEI 436
G S+S QSHQI CCA+NANGT+FVTGSSD+ ARVW+A KPN DD++QP HE+
Sbjct: 370 NTG-----STSNASQSHQILCCAYNANGTIFVTGSSDSNARVWSASKPNLDDAEQPTHEL 424
Query: 437 DVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTPKFKNSWFCHDNIVTCSRDGSAIIW 496
DVL GHENDVNYVQFSGCAVA + S AD+ KEDS PKFKNSWFCHDNIVTCSRDGSAIIW
Sbjct: 425 DVLRGHENDVNYVQFSGCAVAPKSSTADALKEDSYPKFKNSWFCHDNIVTCSRDGSAIIW 484
Query: 497 IPRSRRSHPKAARWTQAYHLKVXXXXXXXXXXXXXXXXXILPTPRGVNMIVWSLDNRFVL 556
PRSR+ H K+ RW + YHLKV LPTPRGVNMI+WSLDNRFVL
Sbjct: 485 TPRSRKFHGKSGRWMKGYHLKVPPPPLPPQPPRGGPRQRFLPTPRGVNMIIWSLDNRFVL 544
Query: 557 AAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWEGI 616
AAIMDCRICVWNAADGSLVH LTGH+ES+YVLDVHPFNPRIAMSAGYDGKTI+WDIWEGI
Sbjct: 545 AAIMDCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIAMSAGYDGKTIIWDIWEGI 604
Query: 617 PIRIYEISRFR--------DGASIILSDDVGQLYILNTGQGESQKDAKYDQFFLGDYRPL 668
PI++YEI RF+ DG SI+LSDDVGQ+Y LNTGQGESQK+AKYDQFFLGDYRPL
Sbjct: 605 PIKVYEIGRFKLVDGKFSQDGTSIVLSDDVGQIYFLNTGQGESQKNAKYDQFFLGDYRPL 664
Query: 669 VQDTYGNVLDQETQLAPHRRNLQDPLCDSAMIPYPEPYQTMYQQRRLGALGIEWRPSSLK 728
++DT G+VLDQETQL PHRRNLQD LCDS+MIPYPEP QTM+QQRRLGALG+EWRPSS+K
Sbjct: 665 IRDTNGHVLDQETQLLPHRRNLQDLLCDSSMIPYPEPDQTMFQQRRLGALGVEWRPSSIK 724
Query: 729 LAVGPDFSLDQGYQLQPLADLDVMIDPLPEFIDVMDWEPENEVQSDDNDSEYNVAEEYXX 788
+VGPDFSL Q Y + PLADLD +I+PLPEFID M WEPE+EV SDDNDSEYN AE
Sbjct: 725 FSVGPDFSLGQDYIMPPLADLDRLIEPLPEFIDAMYWEPEHEVLSDDNDSEYN-AEVSSD 783
Query: 789 XXXXXXXXXXXXXXXXXXXDSEDGENPMDGLRRSKRKKQKAEVEIMTSSGRRVKRRILDE 848
DS D EN + KR+++ +V + TSSGRR KR ILDE
Sbjct: 784 GARASPCSNSSNELECSSEDS-DVENIHESSYHWKRRRKHPKVNVSTSSGRRDKR-ILDE 841
Query: 849 SEGNAAFGNKRTXXXXXXXXXXXXXXXXXXXLRPQXXXXXXXXSFFSKITGAST 902
++ + + G KRT RPQ S SKI+G+S+
Sbjct: 842 NDSSNS-GIKRTKNRRIVVKASKRKHSDVKASRPQRAAAQNARSLLSKISGSSS 894
Score = 921 (329.3 bits), Expect = 0., Sum P(3) = 0.
Identities = 193/409 (47%), Positives = 262/409 (64%)
Query: 1332 NANNNNFHESATDGSRRTRSMGLKTTTCDPDNVSSNLRLEQHNQPEDMYSGHNRSTSRCQ 1391
+A+N F E+ D RR RS+ +++T N + +RL + + G ++
Sbjct: 1123 SAHNFEFGEATADVIRRKRSIRSESST---RNSALRIRLGSGSVDKIKKQGIPSTSVYDD 1179
Query: 1392 LPHEEWGSSSKMTVGLRSTRNRRTSYLFCDSSPIDRRKTHQSLRKGSWLMLSTHEEGSRY 1451
EEW S+SK G RS R++ + S R S K SWL+LS HEEG RY
Sbjct: 1180 ASLEEWPSTSK--AGSRS----RSASVSKPSLHTGIRLNSVS-GKISWLLLSEHEEGCRY 1232
Query: 1452 IPQLGDEVVYLRQGHQEYINYSGSREVGPWITVKGNIRAVEFCKVESLEYATASGSGDSC 1511
IPQLGDEV+Y +QGHQE++ + + N+ AVE CKVE L Y T GSGDSC
Sbjct: 1233 IPQLGDEVIYFKQGHQEFLKTKELNDRDRSRYLPRNLGAVEICKVEKLNYDTYPGSGDSC 1292
Query: 1512 CKMTLKFIDPTSS-VSNMTFRLTLPEVTGFPDFLVERTRFDAAIQRNWTCRDKCKVWWKN 1570
CKMTL+ +D +SS S F+LTLPE+ FPDF+VE+TR+DAAIQ NW ++C+VWW++
Sbjct: 1293 CKMTLRVLDSSSSHASRKEFQLTLPELINFPDFIVEKTRYDAAIQTNWKIGNECRVWWRD 1352
Query: 1571 ESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPTETHLHSPWELFDSDTQWEQP 1630
+ E G+WW+GR+ S + KS++FP+SPWERY V Y+T ET LHSPWE + + WE+
Sbjct: 1353 ATGEGGAWWEGRIESSQVKSTDFPESPWERYRVVYETG--ETSLHSPWEFDNPEFPWEKS 1410
Query: 1631 RIDDDNRNKLLSAFAKLEQSANRVQDQYGVQKLKQVSQKTNFTNRFPVPLSLDVIQSRLE 1690
I+D+ R KLLS FA L +S ++ QD YG+QKL + +QK +F NRFPVPL ++I RLE
Sbjct: 1411 TIEDERREKLLSLFAGLVKSISKHQDSYGIQKLNEAAQKMDFCNRFPVPLYPELIHERLE 1470
Query: 1691 NNYYRGLEAVKHDIAVMLSNAESYFGRNTDLSTKIKRLSDLVTRTLSSL 1739
N YYR +E+ KHD+ MLSNAE YF R+ + +KIKRL D +T+TL L
Sbjct: 1471 NQYYRSIESFKHDVDAMLSNAELYFVRSAHMLSKIKRLRDKLTKTLRKL 1519
Score = 49 (22.3 bits), Expect = 1.5e-88, Sum P(3) = 1.5e-88
Identities = 24/72 (33%), Positives = 33/72 (45%)
Query: 926 IESEESGRSLLNEQRKHSKGKGISL-DDSEDVTKLDTP--ESHVNAGIRRLVLK--LP-V 979
I+ E GR L + + G I L DD + L+T ES NA + L P +
Sbjct: 606 IKVYEIGRFKLVDGKFSQDGTSIVLSDDVGQIYFLNTGQGESQKNAKYDQFFLGDYRPLI 665
Query: 980 RDSNKHELQERT 991
RD+N H L + T
Sbjct: 666 RDTNGHVLDQET 677
Score = 46 (21.3 bits), Expect = 1.5e-88, Sum P(3) = 1.5e-88
Identities = 40/174 (22%), Positives = 65/174 (37%)
Query: 1141 LSGENNDVYSGDASCKEQQSGFSELNYYDESKCVNTTDEDTTPYPNHLQNGTIQPSELKE 1200
LS +N+ Y+ + S ++ N +E +C ++ D D N ++ K
Sbjct: 768 LSDDNDSEYNAEVSSDGARASPCS-NSSNELEC-SSEDSDVE---NIHESSYHWKRRRKH 822
Query: 1201 ILTPVSTKLRIRSKRILRDADVENQNNGCDALHGSSLDIKPNSLPEVLESDGTNRTSSDR 1260
VST R KRIL + D + N+G + +K + R SD
Sbjct: 823 PKVNVSTSSGRRDKRILDEND--SSNSGIKRTKNRRIVVK-----------ASKRKHSDV 869
Query: 1261 GADGSQRLNAQIDSTSEHDPLGSHSHSHDPLGSHSHSHSRKMFNVVYRRSKTNR 1314
A QR AQ + GS S D S+S S + + + K ++
Sbjct: 870 KASRPQRAAAQNARSLLSKISGSSSDEVDDDNDSSNSESDRSIPTLRQLDKPSQ 923
Score = 41 (19.5 bits), Expect = 1.1e-87, Sum P(3) = 1.1e-87
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 1135 LKNVKNLSGENNDVY 1149
++N+K L G N VY
Sbjct: 226 MQNIKKLRGHRNAVY 240
Score = 39 (18.8 bits), Expect = 0., Sum P(3) = 0.
Identities = 17/77 (22%), Positives = 32/77 (41%)
Query: 1121 EEITNCGDNTDEVPLKNVKNLSGENNDVYSGDASCKEQQSGFSELNYYDESKCVNTTDED 1180
E + + GD ++ L+ + + E N G S ++ G S ++ +S C +
Sbjct: 948 ESMGSKGDVINQADLEQLSSKPLEENHRVIGIYS---REPGSSSVDAKGDSGCQSIPYSM 1004
Query: 1181 TTPYPNHLQNGTIQPSE 1197
TP N I+ S+
Sbjct: 1005 NTPQREKADNQLIRSSD 1021
>UNIPROTKB|E1BSG1 [details] [associations]
symbol:BRWD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0008360 "regulation
of cell shape" evidence=IEA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005737 GO:GO:0007010
GO:GO:0005730 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0008360
InterPro:IPR019775 GO:GO:0006357 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00700000104382
InterPro:IPR011044 SUPFAM:SSF50969 EMBL:AADN02010822
EMBL:AADN02010823 IPI:IPI00586943 Ensembl:ENSGALT00000025882
OMA:SRETNST Uniprot:E1BSG1
Length = 2293
Score = 312 (114.9 bits), Expect = 5.7e-75, Sum P(6) = 5.7e-75
Identities = 96/320 (30%), Positives = 154/320 (48%)
Query: 110 SYNKLVERYPHIEKDHLVKLLKQL--IINTSSPSRAMIGGDAPNAADVPTLLGRGSFSLL 167
SY +LV H+ DHL+++ K++ I++ P P+ + V +LLG G SLL
Sbjct: 65 SYEELVLSNKHVAPDHLLQICKRIGPILDKEIP---------PSISRVNSLLGAGRQSLL 115
Query: 168 SYDRDKGQNEIDHPPA----HM-RWPHMYADQVRGLGLREIGGGFTRHHRAPSIRA-ACY 221
+D +N + A H R P + L E+ +RA + A +
Sbjct: 116 RTAKDC-RNTVWKGSAFAALHRGRPPEFPVNYGTPPNLVEV-------YRARQLTGYAKF 167
Query: 222 AIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASC 281
+ + P +M Q ++ +R+ GH ++VYC FDR+G + TGSDD LVKIWS A+
Sbjct: 168 STSFPGSMYQHVKMHRRILGHLSSVYCVAFDRTGHRIFTGSDDCLVKIWSTHNGRLFATL 227
Query: 282 RGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPR-PG 340
RGH +I+D D +IRVW L P++VL GHT ++T++ FSP G
Sbjct: 228 RGHSAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPVAVLHGHTGSITSLQFSPMVKG 287
Query: 341 SVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSH-QIFCCA 399
S+ ++S+ DG W Q+ +D++ N + P+ Q+ C +
Sbjct: 288 SLRYMVSTGADGNVCFW-----QWD--------TDSMKFSNRPVKFTEKPRPGVQMLCSS 334
Query: 400 FNANGTVFVTGSSDTLARVW 419
F+ G TGS+D + R++
Sbjct: 335 FSVGGMFLATGSTDHVIRMY 354
Score = 292 (107.8 bits), Expect = 5.7e-75, Sum P(6) = 5.7e-75
Identities = 84/294 (28%), Positives = 132/294 (44%)
Query: 440 SGHENDVNYVQFSGCAVASRFSLADSSKED-STPKFKNSWFCHDNIVTCSRDGSAIIWIP 498
+G + V + + G R + +S + + +F NS D ++ SRDG+A IW
Sbjct: 344 TGSTDHVIRMYYFGSETPERIAELESHADKVDSIQFSNSG---DRFISGSRDGTARIW-- 398
Query: 499 RSRRSHPKAARWTQAYHLKVXXXXXXXXXXXXXXXXXILPTPRGVNMIVWSLDNRFVLAA 558
R+ +A + P+ V MI W+ D+ +V+ A
Sbjct: 399 ----------RFEEAEWRSILLDMSDRLPGDMCSDEDKFMRPK-VTMIAWNQDDNYVVTA 447
Query: 559 IMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWEGIPI 618
+ + + VWN++ G L+H L GH + +VL+ HPF+ RI +SAG+DG +WDI +G
Sbjct: 448 VNNHLLKVWNSSTGQLLHDLVGHADEVFVLETHPFDSRIMLSAGHDGNIFIWDITKGTKT 507
Query: 619 R-------------IYEISRFRDGASIILSDDVGQLYILNTGQGESQKDAKYDQFFLGDY 665
+ +++ DG +D G L I G + + FF DY
Sbjct: 508 KHYFNMIEGQGHGAVFDCKFSPDGQHFACTDSHGHLLIFGFGCSKPYEKIPDQMFFHTDY 567
Query: 666 RPLVQDTYGNVLDQETQLAPHRRNLQDP--LCDSAMIPYPEPYQTMYQQRRLGA 717
RPL++D+ VLD++TQ APH L P L D P+P YQ + R A
Sbjct: 568 RPLIRDSNNYVLDEQTQQAPH---LMPPPFLVDVDGNPHPTKYQRLVPGRENSA 618
Score = 236 (88.1 bits), Expect = 5.7e-75, Sum P(6) = 5.7e-75
Identities = 63/200 (31%), Positives = 97/200 (48%)
Query: 1439 WLMLSTHEEGSRYIPQLGDEVVYLRQGHQEYIN-------YSGSREVGPWITVKGNIRAV 1491
W+ T S ++PQ+GDEV+Y RQGH+ YI Y + PW V +R
Sbjct: 949 WIT-DTALRRSPFVPQMGDEVIYFRQGHEAYIEAVRRNNIYELNPHKEPWRKVV--LRDQ 1005
Query: 1492 EFCKVESLEYATASGSGDSCCKMTLKFID-PTSSVSNMTFRLTLPEVTGFPDFLVERTRF 1550
E K+ + Y G CC + L FID T ++ +F + ++ DFL+ R +
Sbjct: 1006 ELVKIVGIRYEV--GPPTLCC-LKLAFIDHATGKHTDKSFSIKYHDMPDVIDFLILRQFY 1062
Query: 1551 DAAIQRNWTCRDKCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPT 1610
D A QRNW D+ + S D +WW G VL +P ++PDS ++ Y+V++ +
Sbjct: 1063 DEARQRNWQASDRFR------SIIDDAWWFGTVLGQEPYQPQYPDSHFQCYSVKW--DNG 1114
Query: 1611 ETHLHSPWELFDSDTQWEQP 1630
E SPW++ +QP
Sbjct: 1115 EVEKLSPWDMEPISDNVDQP 1134
Score = 127 (49.8 bits), Expect = 5.7e-75, Sum P(6) = 5.7e-75
Identities = 39/106 (36%), Positives = 55/106 (51%)
Query: 28 ENAQLAGSDTSQPAELDVDVDLREVYFLIMHFLSTGPCHRTYGQFWNELLEHQLLPRRYH 87
E++ GS TS P ++ E+YFLI FLSTGPC T EL +HQLLP+R
Sbjct: 3 ESSASFGSGTSPPL---IE---SELYFLIARFLSTGPCRGTLRVLVQELEQHQLLPKRLD 56
Query: 88 AWYSRSGLPSGDENDDGMSFPLSYNKLVERYPHIEKDHLVKLLKQL 133
W G+E+ SY +LV H+ DHL+++ K++
Sbjct: 57 -W-------EGNEHYR------SYEELVLSNKHVAPDHLLQICKRI 88
Score = 107 (42.7 bits), Expect = 5.5e-60, Sum P(5) = 5.5e-60
Identities = 55/289 (19%), Positives = 110/289 (38%)
Query: 1480 PWITVKGNIRAVEFCKVESLEYATASGSGDSCCKMTLKFIDPTSSVSNMTFRLTLPEVTG 1539
PW V +R E K+ + Y G CC T ++ +F + ++
Sbjct: 996 PWRKVV--LRDQELVKIVGIRYEV--GPPTLCCLKLAFIDHATGKHTDKSFSIKYHDMPD 1051
Query: 1540 FPDFLVERTRFDAAIQRNWTCRDKCK-----VWW----KNESDEDGSWWDG--RVLSVKP 1588
DFL+ R +D A QRNW D+ + WW + + D + SVK
Sbjct: 1052 VIDFLILRQFYDEARQRNWQASDRFRSIIDDAWWFGTVLGQEPYQPQYPDSHFQCYSVKW 1111
Query: 1589 KSSEFPD-SPWERYTVQYKTE-PTE--THLHSPWELFDS------DTQWEQPRIDDDNRN 1638
+ E SPW+ + + P E + +E + + +W R D+
Sbjct: 1112 DNGEVEKLSPWDMEPISDNVDQPEELGASVSVTFEEMEKLLYKPEEGEWGM-RSRDEACE 1170
Query: 1639 KLLSAFAKLEQSANRVQDQYGVQKLKQVSQKTNFTNRFPVPLSLDVIQSRLENNYYRGLE 1698
+++S +L + + + P L+ I++RL N +YR +
Sbjct: 1171 RIISGIDQLLT----LDISAAFAGPVDLCTYPKYCTVIAYPTDLNTIRTRLANRFYRRIS 1226
Query: 1699 AVKHDIAVMLSNAESYFGRNTDLSTKIKRLSDLVTRTLSSLKAPQFHDV 1747
A+ ++ + SNA ++ + ++ K+++ + + ++ D+
Sbjct: 1227 ALVWEVRYIESNARTFNEPGSAIARAAKKITTQLLKFINDQDCTNIFDL 1275
Score = 97 (39.2 bits), Expect = 1.4e-27, Sum P(5) = 1.4e-27
Identities = 42/152 (27%), Positives = 66/152 (43%)
Query: 306 DCIIRVWRLPDGLP--ISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQ 363
D +IR++ P I+ L H V +I FS G + +S S DGT RIW R+ +
Sbjct: 348 DHVIRMYYFGSETPERIAELESHADKVDSIQFS-NSGD--RFISGSRDGTARIW--RFEE 402
Query: 364 FSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACK 423
R + SD + G +M + ++ A+N + VT ++ L +VWN+
Sbjct: 403 AEWRSILLDMSDRLPG-DMCSDEDKFMRP-KVTMIAWNQDDNYVVTAVNNHLLKVWNSST 460
Query: 424 PNTDDSDQPNH--EIDVLSGHENDVNYVQFSG 453
D H E+ VL H D + +G
Sbjct: 461 GQLLH-DLVGHADEVFVLETHPFDSRIMLSAG 491
Score = 87 (35.7 bits), Expect = 1.5e-26, Sum P(5) = 1.5e-26
Identities = 43/188 (22%), Positives = 66/188 (35%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX---- 294
+RGH + + + GS D+++++W + T +A GH G IT
Sbjct: 227 LRGHSAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPVAVLHGHTGSITSLQFSPMVK 286
Query: 295 XXXXXXXXXXXDCIIRVWRLP-DGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D + W+ D + S T PRPG V L SS G
Sbjct: 287 GSLRYMVSTGADGNVCFWQWDTDSMKFS---NRPVKFTE---KPRPG-VQMLCSSFSVGG 339
Query: 354 CRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSH--QIFCCAFNANGTVFVTGS 411
+ Y G P A +SH ++ F+ +G F++GS
Sbjct: 340 MFLATGSTDHVIRMYYF--------GSE-TPERIAELESHADKVDSIQFSNSGDRFISGS 390
Query: 412 SDTLARVW 419
D AR+W
Sbjct: 391 RDGTARIW 398
Score = 68 (29.0 bits), Expect = 1.6e-26, Sum P(6) = 1.6e-26
Identities = 27/90 (30%), Positives = 42/90 (46%)
Query: 561 DCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI-VWDIWEGIPIR 619
DC + +W+ +G L +L GH+ + V+ N IA AG K I VW + P+
Sbjct: 210 DCLVKIWSTHNGRLFATLRGHSAEISDMAVNYENTMIA--AGSCDKMIRVWCLRTCAPVA 267
Query: 620 IYEISRFRDGASIILSDDV-GQL-YILNTG 647
+ S+ S V G L Y+++TG
Sbjct: 268 VLH-GHTGSITSLQFSPMVKGSLRYMVSTG 296
Score = 68 (29.0 bits), Expect = 1.6e-26, Sum P(6) = 1.6e-26
Identities = 31/108 (28%), Positives = 44/108 (40%)
Query: 551 DNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPF---NPRIAMSAGYDGKT 607
+N + A D I VW + V L GHT S L P + R +S G DG
Sbjct: 242 ENTMIAAGSCDKMIRVWCLRTCAPVAVLHGHTGSITSLQFSPMVKGSLRYMVSTGADGNV 301
Query: 608 IVWDIWE-------GIPIRIYEISRFRDGASIILSD-DVGQLYILNTG 647
W W+ P++ E + R G ++ S VG ++ L TG
Sbjct: 302 CFWQ-WDTDSMKFSNRPVKFTE--KPRPGVQMLCSSFSVGGMF-LATG 345
Score = 67 (28.6 bits), Expect = 1.5e-24, Sum P(5) = 1.5e-24
Identities = 33/141 (23%), Positives = 48/141 (34%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETA----YCLASCRGHEGD-- 287
+ I + H + V F SG I+GS D +IW E A L GD
Sbjct: 362 ERIAELESHADKVDSIQFSNSGDRFISGSRDGTARIWRFEEAEWRSILLDMSDRLPGDMC 421
Query: 288 ----------ITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSP 337
+T + +++VW G + L GH V + P
Sbjct: 422 SDEDKFMRPKVTMIAWNQDDNYVVTAVNNHLLKVWNSSTGQLLHDLVGHADEVFVLETHP 481
Query: 338 RPGSVYQLLSSSDDGTCRIWD 358
+ +LS+ DG IWD
Sbjct: 482 FDSRI--MLSAGHDGNIFIWD 500
Score = 65 (27.9 bits), Expect = 2.0e-49, Sum P(6) = 2.0e-49
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWN 420
++C AF+ G TGS D L ++W+
Sbjct: 192 VYCVAFDRTGHRIFTGSDDCLVKIWS 217
Score = 64 (27.6 bits), Expect = 5.7e-75, Sum P(6) = 5.7e-75
Identities = 23/84 (27%), Positives = 40/84 (47%)
Query: 1666 VSQKTNFTNRFPVPLSLDVIQSRLE-NNYYRGLEAVKHDIAVMLSNAESYF-GRNTDLST 1723
+ Q ++ + P+ ++ LE NY +E K DI ++ SNA+SY + + + +
Sbjct: 1350 LDQYPDYRHIIDTPMDFGTVKETLEAGNYDTPMELCK-DIRLIFSNAKSYTPNKKSKIYS 1408
Query: 1724 KIKRLSDL----VTRTLSSLKAPQ 1743
RLS L + R +S K Q
Sbjct: 1409 MTLRLSALFEEKIRRIVSDFKNGQ 1432
Score = 63 (27.2 bits), Expect = 3.2e-49, Sum P(6) = 3.2e-49
Identities = 20/63 (31%), Positives = 26/63 (41%)
Query: 392 SHQIFCCAFNANGTVFVTGSSDTLARVW--NACKPNTDDSDQPNHEIDVLSGHENDVNYV 449
S +I A N T+ GS D + RVW C P + VL GH + +
Sbjct: 231 SAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAP-----------VAVLHGHTGSITSL 279
Query: 450 QFS 452
QFS
Sbjct: 280 QFS 282
Score = 57 (25.1 bits), Expect = 7.9e-55, Sum P(5) = 7.9e-55
Identities = 88/412 (21%), Positives = 158/412 (38%)
Query: 1054 LSNGYKDGKIRWGGVRARS--SKRLKIGEMMPLDANNGSGIHLDDDKEKESEVNGHVKPE 1111
L++ ++GK R + RS S ++ + ++ S ++ KES V P
Sbjct: 1519 LASFERNGKARSTTLTNRSTLSSESEVEGSLASSTSSSSSTEESSEESKESSVALVSPPL 1578
Query: 1112 KDGIDISCGEEITNCGDNTDEVPL-KNVKNLSGENNDVYSGDASCKEQQSGFSELNYYDE 1170
+GI C + NC ++ K + L EN + A K SE
Sbjct: 1579 HNGI---CRRKNINCRITRNQAAQRKQIGTLPQENGNTRK--AVRKRLYESDSENTSAVT 1633
Query: 1171 SKCVNTTDEDTTPYPNHLQNGTIQPSELKEILTPVSTKLRI-RSKRI-LRDADVENQNNG 1228
S+ ++ + P ++ T+ ++L+ +++ V ++ S I ++ + ++N
Sbjct: 1634 SESLSNSTGRHRKIPR--RSATVAATKLR-LMSDVEEEVSSSESIGIGCKNRKLPHRNAS 1690
Query: 1229 CDA----LHGSSLD--IKPNSLPEVLESDGTNR------TSSD-RGADGSQRLNAQIDST 1275
A L GS D +K S E E T R TSS R S+ N DS
Sbjct: 1691 AAARRMLLEGSEDDAGLKSESEKET-EEQLTKRKVLSLSTSSAVRRKFVSESENESSDSE 1749
Query: 1276 SEHDPLGS--HSHSHDPLGSHSHSHSRKMFNVVYRRSKTNRDRTNSEGDGGGVGESTLNA 1333
++ S+ H L + S S +M + S+ + NSE E +++A
Sbjct: 1750 TDTQMKQKTWQSNGHRQLRGTALSASPEMRSPTRGFSEEDSKSHNSEDGSSQKAEQSMSA 1809
Query: 1334 N----NNNFHESATDGSR-RTRSM-GLKTTT-CDPDNVSSNLRLEQHNQPEDMYSGHN-- 1384
N +N+ E+ ++ R R + GL V S+L ++ ED G +
Sbjct: 1810 NKFVVSNSEDEACSESDRWNARKLFGLHLVAPIKKAKVLSDLEDTAESETEDRQDGRSVV 1869
Query: 1385 -RSTSRCQL---PHEEWGSSSKMTVGLRSTRNRRTSYLFCDSSPIDRRKTHQ 1432
+ C++ P+ G+ + S N S F SS ++ T +
Sbjct: 1870 SETLVPCRITASPNSGPGADFNDSCDTESETNSNNSNYFDASSKTKKKSTSE 1921
Score = 55 (24.4 bits), Expect = 1.3e-54, Sum P(5) = 1.3e-54
Identities = 40/197 (20%), Positives = 72/197 (36%)
Query: 1250 SDGTNRTSSDRGADGSQRLNAQIDSTS--EHDP-LGSHSHSHDPLGSHS--HSHSRKMFN 1304
SD N + +QR ++ S S +H + S + PL S + S F+
Sbjct: 1426 SDFKNGQKQNEKIRRNQRYTRRVQSQSSAQHPTKMPSRNLKQKPLKSQAKIESEQEDSFS 1485
Query: 1305 --VVYRRSKTNRDRTNSEG-DGGGVGESTLNANNNNFHESATDGSRRTRSMGLKTTTCDP 1361
R + +TN+ + GES+ +A +F + G R+ ++ ++T
Sbjct: 1486 QPTSSRAACVASHKTNASNYNHSSSGESSDSACLASFERN---GKARSTTLTNRSTLSSE 1542
Query: 1362 DNVSSNLRLEQHNQPEDMYSGHNRSTSRCQL--PHEEWGSSSKMTVGLRSTRNRRTSYLF 1419
V +L + S S L P G + + R TRN+
Sbjct: 1543 SEVEGSLASSTSSSSSTEESSEESKESSVALVSPPLHNGICRRKNINCRITRNQAAQRKQ 1602
Query: 1420 CDSSPIDRRKTHQSLRK 1436
+ P + T +++RK
Sbjct: 1603 IGTLPQENGNTRKAVRK 1619
Score = 53 (23.7 bits), Expect = 2.2e-53, Sum P(6) = 2.2e-53
Identities = 64/303 (21%), Positives = 109/303 (35%)
Query: 1144 ENNDVYSGDASCKEQQSGFSELNYYDESKCVNTTDEDTTPYPNHLQNGTIQP-----SEL 1198
+N G AS ++ S + D S E + N +G+ P SE
Sbjct: 1986 KNRRQLHGSASGASKKKPISSSDI-DVSVMSENEKEQDSDGKNDFCSGSSAPKRKYISES 2044
Query: 1199 KEILTPVSTKLRIRSKRILRDADVENQNNGCDALHGSSLDI-KPNSLPEVLESDGTNRTS 1257
++ T ++ + K D D + + DA ++ D + NS +E+ RTS
Sbjct: 2045 EDEKTESEVEIEVTKKE--NDNDSQTKRTESDAALKNTFDSSEENSTNHKVENGRNWRTS 2102
Query: 1258 SDRGADGSQRL-NAQIDSTSEHDPLGS-------HSHSHDPLGSHSHSHSRKMFNVVYRR 1309
+ + + N++ + +SE + + S PL S+ K +
Sbjct: 2103 GQSTSAYNHHVSNSEEEVSSELAKRETKTIRRARNKRSRAPLKRLKLSNDLKETSESAAG 2162
Query: 1310 SKTNRDRTNSEG--DGGGVGESTLNANNNNFHESATDGSRRTRSMGLKTTTCDPDNVS-S 1366
K + SE G G S N N ++ +S TD S + + K D S
Sbjct: 2163 RKIEEKSSVSENVETPGTAGSSKANLNCSSDSDSGTDNSIYSDATETKKRKTDIVRKEIS 2222
Query: 1367 NL-RLEQHNQPEDMYSGHNRSTSRCQLPHEEWGSSSKMTVGLRSTRNRRT-SYLFCDSSP 1424
NL + + Q + S L + ++ +++ T R RRT Y CD
Sbjct: 2223 NLPKTSRRPQRRKRRKPKQENDSE-DLEYTKYRRANRRTKIRTRNRGRRTVRYDDCDDDD 2281
Query: 1425 IDR 1427
DR
Sbjct: 2282 DDR 2284
Score = 52 (23.4 bits), Expect = 4.6e-15, Sum P(4) = 4.6e-15
Identities = 20/84 (23%), Positives = 31/84 (36%)
Query: 103 DGMSFPLSYNKLVERYPHIEKDHLVKLLKQLIINTSSPSRAMIGG---DAPNAADVPTLL 159
DG P Y +LV + +HL+ L + + +IG D P++L
Sbjct: 599 DGNPHPTKYQRLVPGRENSADEHLIPQLGYVATSDGEVVEQVIGQQTVDQDEQGMEPSIL 658
Query: 160 GRGSFSLLSYDRDKGQNEIDHPPA 183
G L +D+ D PA
Sbjct: 659 D-GMIRQLQLQQDQRNAAADQEPA 681
Score = 48 (22.0 bits), Expect = 5.7e-75, Sum P(6) = 5.7e-75
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 929 EESGRSLLNEQRKHSKGKGISLDDSE 954
E+ G S+L ++ + S+G G S ++ E
Sbjct: 823 EDKGSSILFQEAEESEGSGSSEEEEE 848
Score = 42 (19.8 bits), Expect = 2.8e-53, Sum P(5) = 2.8e-53
Identities = 22/94 (23%), Positives = 36/94 (38%)
Query: 1003 GTSSEAHQEATEGNGNRVSYVGNNCSSVDANCGLMERRGRG---QFDKLED--YLNLSNG 1057
GT + + +ATE + V S++ +RR R Q + ED Y
Sbjct: 2197 GTDNSIYSDATETKKRKTDIVRKEISNLPKTSRRPQRRKRRKPKQENDSEDLEYTKYRRA 2256
Query: 1058 YKDGKIRWGGVRARSSKRLKIGEMMPLDANNGSG 1091
+ KIR R R + ++ + D + G G
Sbjct: 2257 NRRTKIR---TRNRGRRTVRYDDCDDDDDDRGVG 2287
Score = 42 (19.8 bits), Expect = 3.6e-49, Sum P(5) = 3.6e-49
Identities = 28/122 (22%), Positives = 46/122 (37%)
Query: 979 VRDSNKHELQERTSDKCNQ-----LVSVIGTSSEA-HQEATEGNGNRVS-YVGNNCSSVD 1031
+RDSN + L E+T + LV V G +Q G N ++ V
Sbjct: 571 IRDSNNYVLDEQTQQAPHLMPPPFLVDVDGNPHPTKYQRLVPGRENSADEHLIPQLGYVA 630
Query: 1032 ANCGLMERRGRGQFDKLEDYLNLSNGYKDGKIRWGGVRARSSKRLKIGEMMPLDAN--NG 1089
+ G + + GQ +D + DG IR ++ + +R + P + NG
Sbjct: 631 TSDGEVVEQVIGQQTVDQDEQGMEPSILDGMIRQ--LQLQQDQRNAAADQEPASSGLQNG 688
Query: 1090 SG 1091
G
Sbjct: 689 EG 690
Score = 42 (19.8 bits), Expect = 5.2e-30, Sum P(4) = 5.2e-30
Identities = 10/55 (18%), Positives = 20/55 (36%)
Query: 668 LVQDTYGNVLDQETQLAPHRRNLQDPLCDSAMIPYPEPYQTMYQQRRLGALGIEW 722
+++ Y + Q + R++ D + EPYQ Y ++W
Sbjct: 1057 ILRQFYDEARQRNWQASDRFRSIIDDAWWFGTVLGQEPYQPQYPDSHFQCYSVKW 1111
Score = 41 (19.5 bits), Expect = 6.2e-22, Sum P(5) = 6.2e-22
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 536 ILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVH 576
I P+ VN ++ + + +L DCR VW + + +H
Sbjct: 96 IPPSISRVNSLLGA-GRQSLLRTAKDCRNTVWKGSAFAALH 135
Score = 38 (18.4 bits), Expect = 2.2e-53, Sum P(6) = 2.2e-53
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 1129 NTDEVPLKNVKNLSGENNDVYSGDASCK 1156
N + PLK+ + E D +S S +
Sbjct: 1464 NLKQKPLKSQAKIESEQEDSFSQPTSSR 1491
Score = 38 (18.4 bits), Expect = 7.2e-53, Sum P(5) = 7.2e-53
Identities = 27/138 (19%), Positives = 50/138 (36%)
Query: 1095 DDDKEKESEVNGHVKPEKDGIDISCGEEITNCGDNTDEVPLKNVKNLSGENNDVYSGDAS 1154
+D KE G EK + + E G + + + + SG +N +YS
Sbjct: 2151 NDLKETSESAAGRKIEEKSSVSENV-ETPGTAGSSKANLNCSSDSD-SGTDNSIYSDATE 2208
Query: 1155 CKEQQSGFSELNYYDESKCVNTTDEDTTPYPNHLQNGTIQPSELKEILTPVSTKLRIRSK 1214
K++++ + K P +N + K TK+R R++
Sbjct: 2209 TKKRKTDIVRKEISNLPKTSRRPQRRKRRKPKQ-ENDSEDLEYTKYRRANRRTKIRTRNR 2267
Query: 1215 --RILR--DADVENQNNG 1228
R +R D D ++ + G
Sbjct: 2268 GRRTVRYDDCDDDDDDRG 2285
Score = 37 (18.1 bits), Expect = 9.1e-53, Sum P(5) = 9.1e-53
Identities = 33/195 (16%), Positives = 71/195 (36%)
Query: 937 NEQRKHSKGKGISLDDSEDVTKLDTPESHVNAGIRRLVLKLPVRDSNKHELQERTSDKCN 996
NE+ + S GK S + ES + +++ ++ N ++ Q + ++
Sbjct: 2017 NEKEQDSDGKNDFCSGSSAPKRKYISESEDEKTESEVEIEVTKKE-NDNDSQTKRTESDA 2075
Query: 997 QLVSVIGTSSEAHQEATEGNGNRVSYVGNNCSSVDANCGLMERRGRGQFDKLEDYLNLSN 1056
L + +S E NG G + S+ + + E + K E
Sbjct: 2076 ALKNTFDSSEENSTNHKVENGRNWRTSGQSTSAYNHHVSNSEEEVSSELAKRET------ 2129
Query: 1057 GYKDGKIRWGGVRARSS-KRLKIGEMMPLDANNGSGIHLDDDKEKESEVNGHVKPEKDGI 1115
K + R R+R+ KRLK+ + + + +G +++ V
Sbjct: 2130 --KTIR-RARNKRSRAPLKRLKLSNDLKETSESAAGRKIEEKSSVSENVETPGTAGSSKA 2186
Query: 1116 DISCGEEITNCGDNT 1130
+++C + + DN+
Sbjct: 2187 NLNCSSDSDSGTDNS 2201
>RGD|1559445 [details] [associations]
symbol:Brwd3 "bromodomain and WD repeat domain containing 3"
species:10116 "Rattus norvegicus" [GO:0007010 "cytoskeleton
organization" evidence=ISO] [GO:0008360 "regulation of cell shape"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 RGD:1559445 GO:GO:0007010
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0008360 InterPro:IPR019775
Gene3D:1.20.920.10 SUPFAM:SSF47370 GeneTree:ENSGT00700000104382
OrthoDB:EOG4X3H0H InterPro:IPR011044 SUPFAM:SSF50969
IPI:IPI00361975 ProteinModelPortal:D3Z8C5
Ensembl:ENSRNOT00000050336 UCSC:RGD:1559445 Uniprot:D3Z8C5
Length = 1799
Score = 315 (115.9 bits), Expect = 2.1e-70, Sum P(6) = 2.1e-70
Identities = 101/323 (31%), Positives = 149/323 (46%)
Query: 103 DGMSFPLSYNKLVERYPHIEKDHLVKLLKQLIINTSSPSRAMIGGDAPNAAD-VPTLLGR 161
+G S+ LV HI D+L+K+ +++ P ++ + P + V TLLG
Sbjct: 49 EGKEHRRSFEDLVAANAHIPPDYLLKICERI-----GP---LLDKEIPQSVPGVQTLLGV 100
Query: 162 GSFSLLSYDRD-KGQ--NEIDHPPAHM-RWPHMYADQVRGLGLREIGGGFTRHHRAPSIR 217
G SLL +D K N H R P + + V+ + I R S R
Sbjct: 101 GRQSLLRDAKDCKNTLWNGSAFAALHRGRPPELPVNYVKPPNVVNIXS--XRQXTGCS-R 157
Query: 218 AACYAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYC 277
+ PS+ Q ++ KR+ GH ++VYC FDRSGR + TGSDD LVKIW+ +
Sbjct: 158 ---FXHXFPSSAYQHIKMHKRILGHLSSVYCVAFDRSGRRIFTGSDDCLVKIWATDDGRL 214
Query: 278 LASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSP 337
LA+ RGH +I+D D ++RVW L P++VL+GH+A++T+I F P
Sbjct: 215 LATLRGHSAEISDMAVNYENTLIAAGSCDKVVRVWCLRTCAPVAVLQGHSASITSIQFCP 274
Query: 338 RP-GSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIF 396
G+ L S+ DGT W R RP S G Q I
Sbjct: 275 STKGTTRYLTSTGADGTICFWQWHVKTMKFR---DRPV------KFTERSRPGVQ---IS 322
Query: 397 CCAFNANGTVFVTGSSDTLARVW 419
C +F++ G TGS+D + R++
Sbjct: 323 CSSFSSGGMFITTGSTDHVIRIY 345
Score = 265 (98.3 bits), Expect = 2.1e-70, Sum P(6) = 2.1e-70
Identities = 61/186 (32%), Positives = 93/186 (50%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V M+ W + V+ A+ + + VWN+ G L+H+L+GH + +VL+ HPF+ RI +SAG
Sbjct: 426 VTMVAWDRYDTTVITAVNNFLLKVWNSVTGQLLHTLSGHDDEVFVLEAHPFDQRIILSAG 485
Query: 603 YDGKTIVWDIWEGIPIR-------------IYEISRFRDGASIILSDDVGQLYILNTGQG 649
+DG +WD+ G IR +++ DG +D G L + G
Sbjct: 486 HDGNIFIWDLDRGTKIRNYFNMIEGQGHGAVFDCKFSPDGNHFACTDSHGHLLLFGFGCS 545
Query: 650 ESQKDAKYDQFFLGDYRPLVQDTYGNVLDQETQLAPHRRNLQDP--LCDSAMIPYPEPYQ 707
+ + FF DYRPL++D VLD++TQ APH L P L D P+P +Q
Sbjct: 546 KYYEKIPDQMFFHTDYRPLIRDANNYVLDEQTQQAPH---LMPPPFLVDVDGNPHPTKFQ 602
Query: 708 TMYQQR 713
+ R
Sbjct: 603 RLVPGR 608
Score = 243 (90.6 bits), Expect = 2.1e-70, Sum P(6) = 2.1e-70
Identities = 61/190 (32%), Positives = 99/190 (52%)
Query: 1439 WLMLSTHEEGSRYIPQLGDEVVYLRQGHQEYIN-------YSGSREVGPWITVKGNIRAV 1491
W+ L T S ++PQ+GDE++Y RQGH+ Y+ YS + + PW K ++R
Sbjct: 925 WI-LDTIPRRSPFVPQMGDELIYFRQGHEAYVRAVRKSKIYSVNLQKQPWN--KMDLREQ 981
Query: 1492 EFCKVESLEYATASGSGDSCCKMTLKFIDPTSS-VSNMTFRLTLPEVTGFPDFLVERTRF 1550
EF K+ ++Y G CC + L F+DP S ++ +F + ++ DFLV +
Sbjct: 982 EFVKIVGIKYEI--GPPTLCC-LKLAFLDPISGKMTGESFSIKYHDMPDVIDFLVLHQFY 1038
Query: 1551 DAAIQRNWTCRDKCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPT 1610
+ A +RNW D+ + S D +WW G V S +P E+PDS ++ Y+V + +
Sbjct: 1039 NEAKERNWQIGDRFR------SIIDDAWWFGTVESQQPFQPEYPDSSFQCYSVHW--DNN 1090
Query: 1611 ETHLHSPWEL 1620
E SPW++
Sbjct: 1091 EREKMSPWDM 1100
Score = 116 (45.9 bits), Expect = 1.0e-56, Sum P(5) = 1.0e-56
Identities = 64/300 (21%), Positives = 119/300 (39%)
Query: 1451 YIPQLGDEVVYLRQGHQEYINYSGSREVGPWITVKGNIRAVEFCKVESLEYATASGSGDS 1510
Y Q G E Y+R + I YS + + PW K ++R EF K+ ++Y G
Sbjct: 946 YFRQ-GHEA-YVRAVRKSKI-YSVNLQKQPWN--KMDLREQEFVKIVGIKYEI--GPPTL 998
Query: 1511 CCKMTLKFIDPTSSVSNMTFRLTLPEVTGFPDFLVERTRFDAAIQRNWTCRDKCK----- 1565
CC + ++ +F + ++ DFLV ++ A +RNW D+ +
Sbjct: 999 CCLKLAFLDPISGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQIGDRFRSIIDD 1058
Query: 1566 VWWKN--ESDE--DGSWWDG--RVLSVKPKSSEFPD-SPWERYTVQYKTE-PTETHLHSP 1617
WW ES + + D + SV ++E SPW+ + T P E P
Sbjct: 1059 AWWFGTVESQQPFQPEYPDSSFQCYSVHWDNNEREKMSPWDMEPIPEGTAFPDEVGAGIP 1118
Query: 1618 WELFDSDTQWEQPRIDDDNRNKLLSAFAKLEQSANRVQDQYGVQKLK---QVSQKTNFTN 1674
+ +P+ + + ++ Q N + +S +
Sbjct: 1119 VSQEELTALLYKPQEGEWGAHSRDEECERVIQGINNLLSLDFASPFAVPVDLSAYPLYCT 1178
Query: 1675 RFPVPLSLDVIQSRLENNYYRGLEAVKHDIAVMLSNAESYFGRNTDLSTKIKRLSDLVTR 1734
P L+ I+ RLEN +YR + A+ ++ + NA ++ ++ + K ++D++ R
Sbjct: 1179 VVAYPTDLNTIKQRLENRFYRRISALMWEVRYIEHNARTFNEPDSPIVKAAKIVTDVLLR 1238
Score = 109 (43.4 bits), Expect = 2.1e-70, Sum P(6) = 2.1e-70
Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 51 EVYFLIMHFLSTGPCHRTYGQFWNELLEHQLLPRRYHAWYSRSGLPSGDENDDGMSFPLS 110
E+Y+LI FL +GPC+++ EL EHQL+PRR W +G S
Sbjct: 11 ELYYLIARFLQSGPCNKSAQVLVQELEEHQLIPRRLD-W-------------EGKEHRRS 56
Query: 111 YNKLVERYPHIEKDHLVKLLKQL 133
+ LV HI D+L+K+ +++
Sbjct: 57 FEDLVAANAHIPPDYLLKICERI 79
Score = 109 (43.4 bits), Expect = 1.1e-26, Sum P(5) = 1.1e-26
Identities = 39/143 (27%), Positives = 67/143 (46%)
Query: 306 DCIIRVWRLPDGLP--ISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQ 363
D +IR++ L +P I+ L HT V A G + +S S DGT RIW +Y Q
Sbjct: 339 DHVIRIYYLGSEIPEKIAELESHTDKVVAXQXCXN-GKSLRFVSGSRDGTARIW--QYQQ 395
Query: 364 FSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACK 423
+ + + ++G N+ S+ ++ A++ T +T ++ L +VWN+
Sbjct: 396 QEWKSIVLDMATKMSGNNLT-STEDKVTKLKVTMVAWDRYDTTVITAVNNFLLKVWNSV- 453
Query: 424 PNTDDSDQPNHEIDVLSGHENDV 446
+ Q H LSGH+++V
Sbjct: 454 -----TGQLLH---TLSGHDDEV 468
Score = 73 (30.8 bits), Expect = 6.8e-22, Sum P(6) = 6.8e-22
Identities = 21/81 (25%), Positives = 36/81 (44%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V + + R + DC + +W DG L+ +L GH+ + V+ N IA AG
Sbjct: 183 VYCVAFDRSGRRIFTGSDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLIA--AG 240
Query: 603 YDGKTI-VWDIWEGIPIRIYE 622
K + VW + P+ + +
Sbjct: 241 SCDKVVRVWCLRTCAPVAVLQ 261
Score = 62 (26.9 bits), Expect = 5.9e-22, Sum P(5) = 5.9e-22
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 251 FDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDI 288
+DR VIT ++ L+K+W+ T L + GH+ ++
Sbjct: 431 WDRYDTTVITAVNNFLLKVWNSVTGQLLHTLSGHDDEV 468
Score = 62 (26.9 bits), Expect = 5.9e-22, Sum P(5) = 5.9e-22
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 308 IIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
+++VW G + L GH V + P + +LS+ DG IWD
Sbjct: 446 LLKVWNSVTGQLLHTLSGHDDEVFVLEAHPFDQRI--ILSAGHDGNIFIWD 494
Score = 61 (26.5 bits), Expect = 3.7e-44, Sum P(6) = 3.7e-44
Identities = 19/62 (30%), Positives = 25/62 (40%)
Query: 392 SHQIFCCAFNANGTVFVTGSSDTLARVW--NACKPNTDDSDQPNHEIDVLSGHENDVNYV 449
S +I A N T+ GS D + RVW C P + VL GH + +
Sbjct: 222 SAEISDMAVNYENTLIAAGSCDKVVRVWCLRTCAP-----------VAVLQGHSASITSI 270
Query: 450 QF 451
QF
Sbjct: 271 QF 272
Score = 53 (23.7 bits), Expect = 2.1e-70, Sum P(6) = 2.1e-70
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 1679 PLSLDVIQSRLEN-NYYRGLEAVKHDIAVMLSNAESYFG-RNTDLSTKIKRLSDLVTRTL 1736
P+ ++ LE+ NY LE K D+ + SN+++Y + + + + RLS L +
Sbjct: 1366 PMDFSTVKETLESGNYDSPLEFYK-DVRQIFSNSKAYTSNKKSRIYSMTLRLSALFENRI 1424
Query: 1737 SSL 1739
++
Sbjct: 1425 KNI 1427
Score = 53 (23.7 bits), Expect = 4.7e-21, Sum P(5) = 4.7e-21
Identities = 33/127 (25%), Positives = 48/127 (37%)
Query: 536 ILPTPRG----VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVH 591
+L T RG ++ + + +N + A D + VW + V L GH+ S +
Sbjct: 214 LLATLRGHSAEISDMAVNYENTLIAAGSCDKVVRVWCLRTCAPVAVLQGHSASITSIQFC 273
Query: 592 PFNP---RIAMSAGYDGKTIVWDIWE-------GIPIRIYEISRFRDGASIILSD-DVGQ 640
P R S G DG W W P++ E R R G I S G
Sbjct: 274 PSTKGTTRYLTSTGADGTICFWQ-WHVKTMKFRDRPVKFTE--RSRPGVQISCSSFSSGG 330
Query: 641 LYILNTG 647
++I TG
Sbjct: 331 MFI-TTG 336
Score = 46 (21.3 bits), Expect = 7.5e-20, Sum P(5) = 7.5e-20
Identities = 25/94 (26%), Positives = 39/94 (41%)
Query: 1191 GTIQPSELKEILTPVSTKLRIRSKRILRDA-DVENQN-NGCD--ALHGSSLDIKPNSLP- 1245
G + E+ + + V T L + + +LRDA D +N NG ALH +P LP
Sbjct: 80 GPLLDKEIPQSVPGVQTLLGVGRQSLLRDAKDCKNTLWNGSAFAALHRG----RPPELPV 135
Query: 1246 EVLESDGTNRTSSDRGADGSQRLNAQIDSTS-EH 1278
++ S R G R S++ +H
Sbjct: 136 NYVKPPNVVNIXSXRQXTGCSRFXHXFPSSAYQH 169
Score = 43 (20.2 bits), Expect = 2.1e-70, Sum P(6) = 2.1e-70
Identities = 17/66 (25%), Positives = 24/66 (36%)
Query: 762 VMDWEPENEVQSDDNDSEYNVAEEYXXXXXXXXXXXXXXXXXXXXXDSEDGENPMDGLRR 821
V++W+ E+ S D+ SEY+ SED EN R
Sbjct: 839 VVEWQSESS--SSDSSSEYSDWTADAGINLQPPKRQTRQATQKIYSSSED-ENVKSSEDR 895
Query: 822 SKRKKQ 827
K+ KQ
Sbjct: 896 QKKPKQ 901
Score = 42 (19.8 bits), Expect = 4.2e-49, Sum P(5) = 4.2e-49
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 1274 STSEHDPLGSHSHSHDPLGSHSHSHS 1299
S+SE LGS S GS S S S
Sbjct: 1599 SSSESGELGSSLSSESTSGSDSDSES 1624
Score = 41 (19.5 bits), Expect = 9.0e-28, Sum P(4) = 9.0e-28
Identities = 15/74 (20%), Positives = 27/74 (36%)
Query: 649 GESQKDAKYDQFFLGDYRPLVQDTYGNVLDQETQLAPHRRNLQDPLCDSAMIPYPEPYQT 708
GES +D + D+ L Q Y ++ Q+ R++ D + +P+Q
Sbjct: 1015 GESFSIKYHDMPDVIDFLVLHQ-FYNEAKERNWQIGDRFRSIIDDAWWFGTVESQQPFQP 1073
Query: 709 MYQQRRLGALGIEW 722
Y + W
Sbjct: 1074 EYPDSSFQCYSVHW 1087
Score = 38 (18.4 bits), Expect = 6.8e-70, Sum P(6) = 6.8e-70
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 1319 SEGDGGGVGESTLNANNNNFHESATDG 1345
+ GDG V E + N+ ES DG
Sbjct: 624 ANGDGEVV-EQVIGQQTNDQEESILDG 649
Score = 38 (18.4 bits), Expect = 6.8e-22, Sum P(6) = 6.8e-22
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 1232 LHGSSLDIKPNSLPEVLESDGTNRTSSDRGADGS 1265
L G S I S+ + GT R + GADG+
Sbjct: 260 LQGHSASI--TSIQFCPSTKGTTRYLTSTGADGT 291
Score = 38 (18.4 bits), Expect = 1.9e-18, Sum P(6) = 1.9e-18
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVH 576
GV ++ + + +L DC+ +WN + + +H
Sbjct: 93 GVQTLL-GVGRQSLLRDAKDCKNTLWNGSAFAALH 126
Score = 37 (18.1 bits), Expect = 8.6e-70, Sum P(6) = 8.6e-70
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 1210 RIRSKRILRDADVENQNNGCDALHGSSLDIKPNSLPEVLESDGTNRTSSDRGADGSQRLN 1269
R R L +++E+ + G D +S E E+ GT+ S++ Q +
Sbjct: 789 RKRQHTYLTRSNIEHNSQASSQNSGVQGDSDSSS--EEDETVGTSDASAEDPVVEWQSES 846
Query: 1270 AQIDSTSEH 1278
+ DS+SE+
Sbjct: 847 SSSDSSSEY 855
Score = 37 (18.1 bits), Expect = 2.3e-27, Sum P(4) = 2.3e-27
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 536 ILPTPRGVNMIVWSLDNRFV--LAAIM-DCRICVWNA 569
++ P +N I L+NRF ++A+M + R NA
Sbjct: 1179 VVAYPTDLNTIKQRLENRFYRRISALMWEVRYIEHNA 1215
Score = 37 (18.1 bits), Expect = 9.8e-13, Sum P(5) = 9.8e-13
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 686 HRRNLQDPLCDSAMIP 701
HRR+ +D + +A IP
Sbjct: 53 HRRSFEDLVAANAHIP 68
>FB|FBgn0011785 [details] [associations]
symbol:BRWD3 "BRWD3" species:7227 "Drosophila melanogaster"
[GO:0046427 "positive regulation of JAK-STAT cascade" evidence=IGI]
[GO:0006911 "phagocytosis, engulfment" evidence=IMP] [GO:0007095
"mitotic G2 DNA damage checkpoint" evidence=IGI] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
EMBL:AE014297 GO:GO:0007095 GO:GO:0006911 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0046427 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11798
GeneTree:ENSGT00700000104382 CTD:254065 HSSP:Q92793
FlyBase:FBgn0011785 RefSeq:NP_732982.1 UniGene:Dm.5099
ProteinModelPortal:Q9VC96 SMR:Q9VC96 IntAct:Q9VC96 STRING:Q9VC96
EnsemblMetazoa:FBtr0084604 GeneID:42898 KEGG:dme:Dmel_CG31132
UCSC:CG31132-RA InParanoid:Q9VC96 OMA:KSRFENH PhylomeDB:Q9VC96
GenomeRNAi:42898 NextBio:831161 ArrayExpress:Q9VC96 Bgee:Q9VC96
Uniprot:Q9VC96
Length = 2232
Score = 309 (113.8 bits), Expect = 1.3e-69, Sum P(4) = 1.3e-69
Identities = 112/432 (25%), Positives = 189/432 (43%)
Query: 110 SYNKLVERYPHIEKDHLVKLLKQL--IINTSSPSRAMIGGDAPNAADVPTLLGRGSFSLL 167
++ +L +Y HI +HL+++ +L +++ P P+ + +LLG G +LL
Sbjct: 60 TFEELERKYKHIGANHLLEICSRLGPLVDRELP---------PSVPGINSLLGTGRQNLL 110
Query: 168 SYD---------RD--KGQNEIDHPPAHMRWPHMYADQVRGLGLREIGGGFTRHHRAPSI 216
RD N + P + + P D+V L RE GG R
Sbjct: 111 RTKETVYCHRSLRDYCTRLNGVSLPDSVLTKPTHNLDRV--LTGREHGGEVRRK------ 162
Query: 217 RAACYAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAY 276
+ P+ + ++ + ++R GH ++VYC +FDR+GRY+ITG+DD L+KIWS
Sbjct: 163 ------LLVPTDLYRRTKLLRRTVGHLSSVYCVLFDRTGRYIITGADDLLIKIWSAADGR 216
Query: 277 CLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFS 336
LA+ RG +ITD D I+RVW + PI+VL HT +T++ F
Sbjct: 217 LLATLRGASSEITDIAINLDNTMLAAGSLDHILRVWDMQTTSPIAVLSAHTGMITSVNFC 276
Query: 337 PRPGS-VYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQI 395
P P S + L+++S DG+ W + + P+P+ + P + Q+
Sbjct: 277 PSPRSDLKYLVTTSTDGSIAFWQYSTPRGQKITFAPKPTQY--HEKLRPGQA------QM 328
Query: 396 FCCAFNANGTVFVTGSSDTLARVWNACK--PN--------TD--DSDQPNHE-IDVLSGH 442
C F+ G GS+D RV+ + P TD DS Q +H + +SG
Sbjct: 329 MCTTFSPGGIFLAAGSADHHVRVYMMGEDGPKRILETEAYTDAVDSVQWSHRGLRFISGS 388
Query: 443 ENDVNYV------QFSGCAVASRFSLADSSKEDSTPKFKNS---WFCHDN-IVTCSRDGS 492
++ ++ Q+ + LA + + + K + W D ++T D +
Sbjct: 389 KDGTAHIWTFESQQWKSSKLCMTERLASCPEPEEGKRLKVTMVAWDASDRYVITAVNDFT 448
Query: 493 AIIWIPRSRRSH 504
IW +S + H
Sbjct: 449 IKIWDSKSAKLH 460
Score = 272 (100.8 bits), Expect = 1.3e-69, Sum P(4) = 1.3e-69
Identities = 114/443 (25%), Positives = 194/443 (43%)
Query: 1329 STLNANNNNFHESATDGSRRTRSMGLKTTTCDPDNVSSNLRLEQHNQPEDMYSGHNRSTS 1388
S+ + + +N E+ D S + + + D NL + ++ + + S RS+
Sbjct: 891 SSGDTSYSNVEENLEDSSDESETDSSDYSDWVADTPGPNLEPPKRSKRKPL-SRRPRSSD 949
Query: 1389 RCQLPHEEWGSSSKMTVGLRSTRNRRTSYLFCDSSPIDRRKTHQSL-RKGSWLMLSTHEE 1447
E G S V R R+T LF P D L R WL
Sbjct: 950 DSS-DDERAGRSRGGQVTARKV-GRKT-VLF---PPTDANGEIPELYRPAEWLS-EVIPR 1002
Query: 1448 GSRYIPQLGDEVVYLRQGHQEYIN-------YSGSREVGPWITVKGNIRAVEFCKVESLE 1500
+ Y PQ+GDEVVY RQGH +Y++ Y S PW +R E +V ++
Sbjct: 1003 KAPYYPQMGDEVVYFRQGHAKYLDAVRLKKVYKLSHSSEPWNF--HTLRDHELVRVIGIK 1060
Query: 1501 YATASGSGDSCCKMTLKFIDPTSSVSNMTFRLTLPEVTGFPDFLVERTRFDAAIQRNWTC 1560
Y CC + L ID +++ TF++ ++ DFLV R FD A+QRNW+
Sbjct: 1061 YEIRPPR--LCC-LKLAIIDEEGNMTGTTFKIKYHDMPDVLDFLVLRQTFDLAVQRNWSI 1117
Query: 1561 RDK--CKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPTETHLHSPW 1618
D+ C + DG WW G++ S S++FPDS + + V++ + E SPW
Sbjct: 1118 GDRFRCMI-------VDG-WWMGQIESRHALSADFPDSSFMCFRVRW--DNGEYEFMSPW 1167
Query: 1619 ELFDSDTQ-------WEQPRIDDDNRNKLLSAFAK------LEQSANRVQDQYGVQKLKQ 1665
++ D Q P + ++ R L ++ + + R+ + G++++ +
Sbjct: 1168 DMEPIDQQRVPDEVGGAVPVLPEEIRATLYQPKSEEWHRGDRDGTCRRIIN--GLEQVMR 1225
Query: 1666 VSQKTNFT-----NRFP-------VPLSLDVIQSRLENNYYRGLEAVKHDIAVMLSNAES 1713
+S +F N +P P+ L I+SR EN++YR + + + D+ + +NAE
Sbjct: 1226 LSIAEHFLAPVDLNIYPDYAYLIEYPIDLTTIKSRFENHFYRRITSAQFDVRYLATNAEQ 1285
Query: 1714 YFGRNTDLSTKIKRLSDLVTRTL 1736
Y R+ + + ++DL R +
Sbjct: 1286 YNRRHAIIVKHSRIVTDLCLRII 1308
Score = 238 (88.8 bits), Expect = 1.3e-69, Sum P(4) = 1.3e-69
Identities = 64/215 (29%), Positives = 105/215 (48%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V M+ W +R+V+ A+ D I +W++ L L GH + YVL+ +P + + +SAG
Sbjct: 428 VTMVAWDASDRYVITAVNDFTIKIWDSKSAKLHRVLRGHKDELYVLESNPRDEHVLLSAG 487
Query: 603 YDGKTIVWDIWEGIPIR-------------IYEISRFRDGASIILSDDVGQLYILNTGQG 649
+DG+ +WDI +G+ + +++ DG I +D G + I G
Sbjct: 488 HDGQVFLWDIEQGVCVANFLNDIDGQGHGSVFDAKWSPDGTMIAATDSHGHILIFGLGVC 547
Query: 650 -ESQKDAKYDQFFLGDYRPLVQDTYGNVLDQETQLAPHRRNLQDP--LCDSAMIPYPEPY 706
E K + FF D+RPL++D +V+D++TQ+ PH L P L D+ P+P +
Sbjct: 548 IEKYKMLPTELFFHTDFRPLLRDAQHHVVDEQTQIMPH---LMPPPFLVDADGNPHPSRF 604
Query: 707 QTMYQQRRLGALGIEWRPSSLKLAVGPD-FSLDQG 740
Q R +L + P+ L VG D +D G
Sbjct: 605 QRFVPGRESCSLD-QLIPN---LTVGVDGVVIDDG 635
Score = 108 (43.1 bits), Expect = 1.3e-69, Sum P(4) = 1.3e-69
Identities = 33/99 (33%), Positives = 52/99 (52%)
Query: 36 DTSQPAELDVDVDLR-EVYFLIMHFLSTGPCHRTYGQFWNELLEHQLLPRRYHAWYSRSG 94
+T QP+ D DL+ E+YFLI FL+ GP T EL E ++LPRR W
Sbjct: 2 ETRQPSSGD---DLKPELYFLISKFLAAGPLEETAKVLIRELEEKKVLPRRLD-W----- 52
Query: 95 LPSGDENDDGMSFPLSYNKLVERYPHIEKDHLVKLLKQL 133
G+E++ ++ +L +Y HI +HL+++ +L
Sbjct: 53 --QGNEHEQ------TFEELERKYKHIGANHLLEICSRL 83
Score = 89 (36.4 bits), Expect = 2.0e-27, Sum P(3) = 2.0e-27
Identities = 37/139 (26%), Positives = 52/139 (37%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAY------C----LASC-R 282
+ I + +AV + G I+GS D IW+ E+ C LASC
Sbjct: 360 KRILETEAYTDAVDSVQWSHRGLRFISGSKDGTAHIWTFESQQWKSSKLCMTERLASCPE 419
Query: 283 GHEGD---ITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRP 339
EG +T D I++W VLRGH + + +PR
Sbjct: 420 PEEGKRLKVTMVAWDASDRYVITAVNDFTIKIWDSKSAKLHRVLRGHKDELYVLESNPRD 479
Query: 340 GSVYQLLSSSDDGTCRIWD 358
V LLS+ DG +WD
Sbjct: 480 EHV--LLSAGHDGQVFLWD 496
Score = 80 (33.2 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 20/78 (25%), Positives = 38/78 (48%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V +++ R+++ D I +W+AADG L+ +L G + + ++ N +A +
Sbjct: 186 VYCVLFDRTGRYIITGADDLLIKIWSAADGRLLATLRGASSEITDIAINLDNTMLA-AGS 244
Query: 603 YDGKTIVWDIWEGIPIRI 620
D VWD+ PI +
Sbjct: 245 LDHILRVWDMQTTSPIAV 262
Score = 72 (30.4 bits), Expect = 8.2e-49, Sum P(5) = 8.2e-49
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 808 DSEDGENPMDGLRRSKRKKQKAEVEI-MTSSGRRVKRRILDESEGNAAFG 856
DSED NP +G R S+R+ A ++G KRR L++S NAA G
Sbjct: 1648 DSEDSYNPNEG-RGSRRRPGAARPSSNRQTNGHSSKRRRLNKSPANAAPG 1696
Score = 64 (27.6 bits), Expect = 1.8e-47, Sum P(5) = 1.8e-47
Identities = 66/335 (19%), Positives = 114/335 (34%)
Query: 1095 DDDKEKESEVNGHVKPEKDGIDISCGEEITNCGDNTDEVPLKNVKNLSGENNDVYSGDAS 1154
DDD E+E+ G + ++G+ +S +N ++ + K+ S E + A
Sbjct: 1548 DDDDEEEASTRGRSR-RRNGVAVSASSSGSNRVTSSSAAQQRRGKSSSSEEEEEEETSAQ 1606
Query: 1155 CKEQQSGFSELNYYDESKCVNTTDEDTTPYPNHLQNGT-IQPSELKEILTPVSTKLRIRS 1213
S E T L + + I SE + P + R
Sbjct: 1607 ATSDASSDEEERAQSNDSSPQQTRTRRARQRQRLSDDSNINDSE--DSYNPNEGRGSRRR 1664
Query: 1214 KRILRDADVENQNNGCDALHGSSLDIKP-NSLPEVLESDGTNRTSSDRGADGSQRLNAQI 1272
R + Q NG + L+ P N+ P T R + + + ++Q
Sbjct: 1665 PGAARPSS-NRQTNGHSSKR-RRLNKSPANAAPGPSLPRRTRRIAGSSAEEAAS--HSQH 1720
Query: 1273 DSTSEHDPLG---SHSHSHDPLGSHSHSHSRKMFNVVY----RRSKTNRDRTNSEGDGGG 1325
D +++ +G S S +G+ + + N R ++ N RT+S
Sbjct: 1721 DESTQDSQIGRRKGRSASSRSIGNGPSTSAAAAANSSLESPSRNTRANGTRTSSHLGAEN 1780
Query: 1326 VGESTLNANNNNFHESATDGS--RRTRSMGLKTTTCDPDNVSSNLRLEQHNQPEDMYSGH 1383
L N ES TD R TR K D S++ E+ + ED
Sbjct: 1781 DHSYHLPVRNGRIIESDTDSPVIRPTRQSA-KRALMDWGR-GSDIEEEEEEEEEDSEEAE 1838
Query: 1384 N--RSTSRCQLPHEEWGSSSKMTVG----LRSTRN 1412
+ ++ LP + ++ G LR+ RN
Sbjct: 1839 EILPTPTKDDLPSTSRAALAQAAAGPSRQLRTNRN 1873
Score = 58 (25.5 bits), Expect = 3.2e-24, Sum P(3) = 3.2e-24
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 232 KMQNIKRV-RGHRNAVYCAIFD-RSGRYVITGSDDRLVKIWSMETAYCLAS 280
K + RV RGH++ +Y + R +++ D V +W +E C+A+
Sbjct: 455 KSAKLHRVLRGHKDELYVLESNPRDEHVLLSAGHDGQVFLWDIEQGVCVAN 505
Score = 56 (24.8 bits), Expect = 5.2e-24, Sum P(3) = 5.2e-24
Identities = 22/83 (26%), Positives = 36/83 (43%)
Query: 536 ILPTPRGVNM----IVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVH 591
+L T RG + I +LDN + A +D + VW+ S + L+ HT ++
Sbjct: 217 LLATLRGASSEITDIAINLDNTMLAAGSLDHILRVWDMQTTSPIAVLSAHTGMITSVNFC 276
Query: 592 PFNPR----IAMSAGYDGKTIVW 610
P +PR ++ DG W
Sbjct: 277 P-SPRSDLKYLVTTSTDGSIAFW 298
Score = 51 (23.0 bits), Expect = 1.9e-46, Sum P(6) = 1.9e-46
Identities = 26/117 (22%), Positives = 50/117 (42%)
Query: 1308 RRSKTNRDRTNSEGDGGGVGESTLNANNNNFHESATDGSRRTRSMGLKTTTCDPDNVSSN 1367
RR K++ E + S +++ +S ++TR+ + D+ SN
Sbjct: 1588 RRGKSSSSEEEEEEETSAQATSDASSDEEERAQSNDSSPQQTRTRRARQRQRLSDD--SN 1645
Query: 1368 LRLEQHNQPEDMYSGHNRSTSRCQLPHEEWGSSSKMTVGLRSTRNRRTSYLFCDSSP 1424
+ N ED Y+ + SR + P SS++ T G S++ RR + +++P
Sbjct: 1646 I-----NDSEDSYNPNEGRGSR-RRPGAARPSSNRQTNG-HSSKRRRLNKSPANAAP 1695
Score = 50 (22.7 bits), Expect = 8.2e-49, Sum P(5) = 8.2e-49
Identities = 21/94 (22%), Positives = 42/94 (44%)
Query: 1140 NLSGENNDVYSGDASCKEQQSGFSELNYYDESKCVNTTDEDTTPYPNHLQNGTIQPS-EL 1198
N E+++ AS + G S +Y DE + ++ ED P +++ +P +
Sbjct: 2036 NSHDEDHEEEEAAASDEGTDGGSSSQSYEDEDE--DSDSEDNQPLTSYVSPSNGRPRRKA 2093
Query: 1199 KEILTPVSTKLRI--RSKRILRDADVENQNNGCD 1230
K + +T+ R R++R + + N N+ D
Sbjct: 2094 KTSSSSATTQERPLRRTRRPPSNNSIANDNDDDD 2127
Score = 50 (22.7 bits), Expect = 1.9e-46, Sum P(6) = 1.9e-46
Identities = 14/52 (26%), Positives = 29/52 (55%)
Query: 1200 EILTPVSTKLRIRSKRI--LRDADVENQNNGCDALHGSSLDIKPNSLPEVLE 1249
E++ + K IR R+ L+ A ++ + N + G++ IK + +P+VL+
Sbjct: 1052 ELVRVIGIKYEIRPPRLCCLKLAIIDEEGN----MTGTTFKIKYHDMPDVLD 1099
Score = 49 (22.3 bits), Expect = 1.0e-48, Sum P(5) = 1.0e-48
Identities = 43/203 (21%), Positives = 77/203 (37%)
Query: 1178 DEDTTPYPNHLQNGTIQPSELKEILTPVSTKLRIRSKRILR--DADVENQNNGCDALHGS 1235
D D P N+ Q P++ T L +R +R+ + + + + S
Sbjct: 1888 DSDNEPLANNQQKNYQSPAKSSSTATVAPHPLSLR-RRLASPPERNTHMTRSHATSTTSS 1946
Query: 1236 SLDIKPNSLPEVLESD-----GTNRTSSDRGADGSQRLNA-QIDSTS---EHDPLGSHSH 1286
+ + P V D N + + R + NA ++D++ E+ L S
Sbjct: 1947 AAASRAEQQPAVSTHDHNYLGNVNSSRAPRRILSRHQRNADELDTSLDVLENSRLLSAIA 2006
Query: 1287 SHDPLGSHSHSHSRKMFNVVYRR-----SKTN-RDRTNSEGDGGGVGESTLNANNNNFHE 1340
+H S ++S+S NVV RR S+ N D + E + E T +++ +E
Sbjct: 2007 NHRRPTSTTNSNSAS--NVVTRRLRGRASQANSHDEDHEEEEAAASDEGTDGGSSSQSYE 2064
Query: 1341 SATDGSRRTRSMGLKTTTCDPDN 1363
+ S + L T+ P N
Sbjct: 2065 DEDEDSDSEDNQPL-TSYVSPSN 2086
Score = 47 (21.6 bits), Expect = 1.7e-48, Sum P(5) = 1.7e-48
Identities = 35/175 (20%), Positives = 64/175 (36%)
Query: 926 IESEESGRSLLNEQRKHSKGKGISLDDSEDVTKLDTPESHVNAGIRRLVLKLPVRDSNKH 985
+ S + R +L+ ++++ SLD E+ L +H RR P +N +
Sbjct: 1969 VNSSRAPRRILSRHQRNADELDTSLDVLENSRLLSAIANH-----RR-----PTSTTNSN 2018
Query: 986 ELQERTSDKCNQLVSVIGTSSEAHQEATEGNGNRVSYVGNNCSSVDANCGLMERRGRGQF 1045
+ + S + E H+E + + G++ S + E
Sbjct: 2019 SASNVVTRRLRGRASQANSHDEDHEEEEAAASDEGTDGGSSSQSYEDED---EDSDSEDN 2075
Query: 1046 DKLEDYLNLSNGYKDGKIRWGGVRARSSKR-LKIGEMMPLDANNGSGIHLDDDKE 1099
L Y++ SNG K + A + +R L+ P +NN DDD +
Sbjct: 2076 QPLTSYVSPSNGRPRRKAKTSSSSATTQERPLRRTRRPP--SNNSIANDNDDDDD 2128
Score = 47 (21.6 bits), Expect = 3.8e-46, Sum P(6) = 3.8e-46
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 1230 DALHGSSLDIKPNSLPEVLESDGTNRTSSDRGADGSQRLNAQIDSTSEH 1278
D H S + + +S +V+ S T T+S A QR+++ ST H
Sbjct: 1325 DVYHSSESENEVDS--DVVPSTSTGPTTSAAAAAARQRVSSARRSTRIH 1371
Score = 45 (20.9 bits), Expect = 2.7e-48, Sum P(5) = 2.7e-48
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 951 DDSEDVTKLDTPESHVNAGIRRLVLK 976
++ ED T +D+ E VN R V K
Sbjct: 2196 EEEEDGTSVDSEEQQVNVSSRGRVRK 2221
Score = 45 (20.9 bits), Expect = 1.8e-47, Sum P(5) = 1.8e-47
Identities = 25/90 (27%), Positives = 35/90 (38%)
Query: 740 GYQLQPLADLDVMIDPLPEFIDVMDWEPENE---VQSDDN-DSEYNVAEEYXXXXXXXXX 795
G Q QP + D PE D + PE E V S+ + D+ Y+ EE
Sbjct: 853 GGQPQPAYRTRAVRDQEPEHYDEVAPPPEEEEEDVSSNSSGDTSYSNVEE-NLEDSSDES 911
Query: 796 XXXXXXXXXXXXDSEDGENPMDGLRRSKRK 825
D+ G N ++ +RSKRK
Sbjct: 912 ETDSSDYSDWVADTP-GPN-LEPPKRSKRK 939
Score = 45 (20.9 bits), Expect = 4.9e-46, Sum P(4) = 4.9e-46
Identities = 13/60 (21%), Positives = 25/60 (41%)
Query: 1350 RSMGLKTTTCDPDNVSSNL-RLEQHNQPEDMYSGHNRST---SRCQLPHEEWGSSSKMTV 1405
+S+ + +P N + + RL P+ +R SR P + WG+++ V
Sbjct: 682 QSVNVNANDANPTNGNQSFERLTNRQMPDSNGRQSSRGNVLGSRLSTPRQGWGAAAAAPV 741
Score = 44 (20.5 bits), Expect = 9.7e-46, Sum P(6) = 9.7e-46
Identities = 16/75 (21%), Positives = 32/75 (42%)
Query: 976 KLPVRDSNKHELQERTSDKCNQLVSVIGTSSEAHQEATEGNGNRVSYVGNNCSSVDANCG 1035
+LPV +S++ E +E D + + + NG VS + + V ++
Sbjct: 1528 RLPVANSSEDEDEEDDDDDDDDDDE---EEASTRGRSRRRNGVAVSASSSGSNRVTSSSA 1584
Query: 1036 LMERRGRGQFDKLED 1050
+RRG+ + E+
Sbjct: 1585 AQQRRGKSSSSEEEE 1599
Score = 43 (20.2 bits), Expect = 5.1e-45, Sum P(5) = 5.1e-45
Identities = 20/84 (23%), Positives = 33/84 (39%)
Query: 1245 PEVLESDGTNRTSSDRG-ADGSQRLNAQIDSTSEHDPLGSHSHSHDPLGSHSHSHSRKMF 1303
PE E D ++ +S D ++ + L D SE D D G + R
Sbjct: 880 PEEEEEDVSSNSSGDTSYSNVEENLEDSSDE-SETDSSDYSDWVADTPGPNLEPPKRSKR 938
Query: 1304 NVVYRRSKTNRDRTNSEGDGGGVG 1327
+ RR +++ D ++ E G G
Sbjct: 939 KPLSRRPRSSDDSSDDERAGRSRG 962
Score = 42 (19.8 bits), Expect = 1.5e-45, Sum P(6) = 1.5e-45
Identities = 21/106 (19%), Positives = 40/106 (37%)
Query: 1311 KTNRDRTNSEGDGGGVGESTLNANNNNFHESATDGSRRTRSMG--LKTTTCDPDNVSSNL 1368
+ N++++ S G GG G S+ + N E +T +++ + L D +
Sbjct: 1486 RANKNKSGSSG--GGRGGSSSSPNKRVKKERSTRRNQKPTAAARRLPVANSSEDEDEEDD 1543
Query: 1369 RLEQHNQPEDMYSGHNRSTSRCQLPHEEWGSSSKMTVGLRSTRNRR 1414
+ + E+ S RS R + S S + + RR
Sbjct: 1544 DDDDDDDDEEEASTRGRSRRRNGVAVSASSSGSNRVTSSSAAQQRR 1589
Score = 40 (19.1 bits), Expect = 8.7e-48, Sum P(5) = 8.7e-48
Identities = 16/73 (21%), Positives = 30/73 (41%)
Query: 1085 DANNGSGIHLDDDKEKESEVNGHVKPEKDGIDISCGE-----EITNCGDNTDEVPLKNVK 1139
D + S + D+D++ +SE N +P + S G + ++ T E PL+ +
Sbjct: 2055 DGGSSSQSYEDEDEDSDSEDN---QPLTSYVSPSNGRPRRKAKTSSSSATTQERPLRRTR 2111
Query: 1140 NLSGENNDVYSGD 1152
N+ D
Sbjct: 2112 RPPSNNSIANDND 2124
Score = 38 (18.4 bits), Expect = 5.1e-06, Sum P(5) = 5.1e-06
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 359 ARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGP 390
A Y Q + +Y S+ ++ PS+S GP
Sbjct: 1318 AVYHQLAD-VYHSSESENEVDSDVVPSTSTGP 1348
Score = 37 (18.1 bits), Expect = 3.2e-45, Sum P(5) = 3.2e-45
Identities = 5/23 (21%), Positives = 14/23 (60%)
Query: 762 VMDWEPENEVQSDDNDSEYNVAE 784
+MDW ++++ ++ + E + E
Sbjct: 1814 LMDWGRGSDIEEEEEEEEEDSEE 1836
Score = 37 (18.1 bits), Expect = 3.2e-45, Sum P(5) = 3.2e-45
Identities = 14/70 (20%), Positives = 23/70 (32%)
Query: 768 ENEVQSDDNDSEYNVAEEYXXXXXXXXXXXXXXXXXXXXXDSEDGENPMDGLRRSKRKKQ 827
E+E + DD+D + + EE + + RR K
Sbjct: 1536 EDEDEEDDDDDDDDDDEEEASTRGRSRRRNGVAVSASSSGSNRVTSSSAAQQRRGKSSSS 1595
Query: 828 KAEVEIMTSS 837
+ E E TS+
Sbjct: 1596 EEEEEEETSA 1605
>DICTYBASE|DDB_G0285837 [details] [associations]
symbol:DDB_G0285837 "BRWD group protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 dictyBase:DDB_G0285837 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
EMBL:AAFI02000080 HSSP:Q03330 RefSeq:XP_638029.1
ProteinModelPortal:Q54MP8 EnsemblProtists:DDB0220685 GeneID:8625294
KEGG:ddi:DDB_G0285837 InParanoid:Q54MP8 OMA:DEITDIY Uniprot:Q54MP8
Length = 2200
Score = 270 (100.1 bits), Expect = 8.8e-55, Sum P(7) = 8.8e-55
Identities = 72/241 (29%), Positives = 111/241 (46%)
Query: 482 DNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVXXXXXXXXXXXXXXXXXILPTPR 541
D IV+ S DG+ IIW H +W H+ + +
Sbjct: 606 DAIVSGSYDGTVIIW------RHSGGPKWD---HVIFNIKNTQRPNQANSHPKKVARSKA 656
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
++WS D+RF++ + I VWN+ DGS + HT YV HPF+ R+ MS+
Sbjct: 657 TFKNVIWSHDDRFIITTDYNM-IRVWNSLDGSFHLEMAEHTSEVYVTSCHPFDSRLIMSS 715
Query: 602 GYDGKTIVWDIWEGIPIRIYEISR--FR----------DGASIILSDDVGQLYILNTGQG 649
GYD + I+W I G I+ + + F+ DG I+++ G+ ++ G G
Sbjct: 716 GYDSQVILWSIETGEIIKKFVLQEPGFQCQILDGCFSPDGQKFIVTNSTGKWFMFELGLG 775
Query: 650 ESQKDAKY----DQFFLGDYRPLVQDTYGNVLDQETQLAPHRRNLQDPLCDSAMIPYPEP 705
+ K +Q+FL DY PL++D GNVLD+ TQ PH + L + +PYP+
Sbjct: 776 SDINNLKKLVPNEQYFLTDYHPLIRDANGNVLDELTQTPPHLMP-RAMLVNYQGLPYPDH 834
Query: 706 Y 706
Y
Sbjct: 835 Y 835
Score = 228 (85.3 bits), Expect = 8.8e-55, Sum P(7) = 8.8e-55
Identities = 53/140 (37%), Positives = 72/140 (51%)
Query: 226 PSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHE 285
P + +N V GH+ YC FD+SGR TGSDD LVK+WS + +A+ RGH
Sbjct: 337 PISFYSNFKNSLIVYGHKAPTYCLQFDKSGRLYFTGSDDHLVKVWSTYSGRLIATLRGHL 396
Query: 286 GDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGL--PISVLRGHTAAV----TAIAFSPRP 339
GDITD D +IR+W L I+ L GH +V T+I+F P
Sbjct: 397 GDITDMCTSFDNSLLATASNDNVIRIWNLNSNQYDSIASLTGHDPSVNNTITSISFLSNP 456
Query: 340 GSVYQLLSSSDD-GTCRIWD 358
+ +LL SSD G C++W+
Sbjct: 457 TT--RLLVSSDSFGQCKLWN 474
Score = 131 (51.2 bits), Expect = 8.8e-55, Sum P(7) = 8.8e-55
Identities = 47/198 (23%), Positives = 89/198 (44%)
Query: 1489 RAVEFCKVESLEYATASGSGDSCCKMTL-----KFIDPTSSVSNMTFRLTLPEVTGFPDF 1543
++ + C +++L Y S G +TL + + P + F + V+ PD+
Sbjct: 1304 KSYQECIIKNLNYFI-SPDGTHKVVITLLPVFDQQVPPQNQNDESNFYTVIYHVSDIPDY 1362
Query: 1544 LVERTRFDAAIQRNWTCRDKCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTV 1603
LV ++ ++ +WT +K + S W++G ++ + FP+SPWE V
Sbjct: 1363 LVLASKVRKSMLTDWTVPNKRFRMFYPAS----GWYNGTIIEISDSDPLFPNSPWENIKV 1418
Query: 1604 QYKTEPTETHLHSPWEL---FDSDTQWEQPR-IDDDNRN-KLLSAFAKLEQSANRVQ-DQ 1657
+ E ++ WE+ FD D ++ + I D+N N K++ + +Q + Q Q
Sbjct: 1419 LWDDTEEEDRVNY-WEIDEKFDDDQNPQKIKEIKDENENEKVIENNQQQQQQQPQQQPQQ 1477
Query: 1658 YGVQKLKQVS-QKTNFTN 1674
+Q +Q+S TN N
Sbjct: 1478 QPIQNNQQLSINNTNVNN 1495
Score = 100 (40.3 bits), Expect = 8.8e-55, Sum P(7) = 8.8e-55
Identities = 61/286 (21%), Positives = 120/286 (41%)
Query: 1196 SELKEILTPVSTKLRI--RSKRILRDADVENQNNGCDALHGSSLDIKPNSLPEVLESDGT 1253
S+ K++ T +K++ R KR+L+ + + N + ++ LPE D
Sbjct: 969 SDGKKMSTRKKSKIKADKRKKRLLKQSKKFTRRNTSPSKFNEIMNTF--DLPE---DDDN 1023
Query: 1254 NRTSSDRGADGSQRL-NAQ-----IDSTSEHDPLGSHSHSHDPL---GSHSHSHSRKMFN 1304
N +++R A ++RL N Q + + E + + +D + + + H + N
Sbjct: 1024 NSNNNNRKAVSNKRLSNKQKKRYNLINDGEIEMDDDDQYLNDNILDSDDNDYEHRNRYDN 1083
Query: 1305 VVYRRSKTNRDRTNSEGDGGGVGESTLNANNNNFHESATDGSRRTRSMGLKTTTCDPDNV 1364
+ S++ + G GGG +S +++N++ ++S+ +GS S G K+ +
Sbjct: 1084 DEFSGSESYNG--SDGGGGGGDDDSDNSSDNSSENDSSANGSDSDYS-GSKSNKNKRGDK 1140
Query: 1365 SSNLRLEQHNQPEDMYSGHNRSTSRCQLPHEEWGSSSKMTVGLRSTRNRRTSYLFCDSSP 1424
S + + N R S SSS T +N T+ +
Sbjct: 1141 SKRNKKGKKNVKNKKVQKRGRKKSST--------SSSSST---SHNQNHLTASALKKLND 1189
Query: 1425 IDRRKTHQSLRKGSWLMLSTHEEGSRYIPQLGDEVVYLRQGHQEYI 1470
I ++K + WL +++ + Y PQ+GD + Y QGH +Y+
Sbjct: 1190 IRKKKEILPVCP-KWLSITSTTSETFYSPQVGDFIFYFYQGHTKYL 1234
Score = 87 (35.7 bits), Expect = 8.8e-55, Sum P(7) = 8.8e-55
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 1675 RF-PVPLSLDVIQSRLENNYYRGLEAVKHDIAVMLSNAESYFGRNTDLSTKIK----RLS 1729
RF P P+ + I RLE++YYR L+A+ D +++ +A Y NT ++ K R+S
Sbjct: 1758 RFVPHPMDISTIIKRLESSYYRSLDAIYFDAKLIMIDAYVYNKPNTMVAKNSKLVFHRIS 1817
Query: 1730 DLV 1732
D++
Sbjct: 1818 DIL 1820
Score = 82 (33.9 bits), Expect = 5.6e-40, Sum P(7) = 5.6e-40
Identities = 33/122 (27%), Positives = 56/122 (45%)
Query: 306 DCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFS 365
D +++VW G I+ LRGH +T + S S+ L ++S+D RIW+ +Q+
Sbjct: 375 DHLVKVWSTYSGRLIATLRGHLGDITDMCTS-FDNSL--LATASNDNVIRIWNLNSNQY- 430
Query: 366 PRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLA--RVWNACK 423
D++A S ++ I +F +N T + SSD+ ++WN K
Sbjct: 431 ---------DSIASLTGHDPSV----NNTITSISFLSNPTTRLLVSSDSFGQCKLWNLDK 477
Query: 424 PN 425
N
Sbjct: 478 SN 479
Score = 77 (32.2 bits), Expect = 2.0e-16, Sum P(6) = 2.0e-16
Identities = 37/154 (24%), Positives = 65/154 (42%)
Query: 306 DCIIRVWRLPDGLP--ISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYS- 362
D +++W P ++ L GH + A+ +S GS ++S S DGT IW R+S
Sbjct: 570 DSSLKIWSTLFNPPKLVNTLEGHPTTILALQYSH--GSD-AIVSGSYDGTVIIW--RHSG 624
Query: 363 --QFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
++ I+ + + N P A +S F ++ F+ + + RVWN
Sbjct: 625 GPKWDHVIFNIKNTQRPNQANSHPKKVA--RSKATFKNVIWSHDDRFIITTDYNMIRVWN 682
Query: 421 ACKPNTD-DSDQPNHEIDVLSGHENDVNYVQFSG 453
+ + + + E+ V S H D + SG
Sbjct: 683 SLDGSFHLEMAEHTSEVYVTSCHPFDSRLIMSSG 716
Score = 68 (29.0 bits), Expect = 7.5e-43, Sum P(6) = 7.5e-43
Identities = 34/164 (20%), Positives = 64/164 (39%)
Query: 1224 NQNNGCDALHGSSLDIKPNSLPEVLESDGTNRTSSD----RGADGSQRLNAQIDSTSEHD 1279
N NN + + S+ ++ + + + + N + +G +N + S D
Sbjct: 1536 NNNNNNNFNYNSNNNLSMSGILDYTNFNNNNNNFMNYNMYQGNYNGMMMNNNTSNYSYLD 1595
Query: 1280 PLGSHSHSHD-PLGSHSHSHSRKMFNVVYRRSK---TNRDRTNSEGDG----GGVGESTL 1331
P S+ + P S + + N +Y S+ TN + TN+ + +
Sbjct: 1596 PNNSNMYMQTYPQNSTMQNQQQPQLNNIYYNSQLQPTNYNYTNNFNTNYSNFNNSSSNIM 1655
Query: 1332 NAN-NNNFHESATDGSRRTRSMGLKTTTCDPDNVSSNLRLEQHN 1374
N N NNNF+ T + T + TTT + N ++N +N
Sbjct: 1656 NYNTNNNFNSPPTATTSNTTTT--TTTTTETSNNNNNNNNNNNN 1697
Score = 66 (28.3 bits), Expect = 4.3e-42, Sum P(7) = 4.3e-42
Identities = 41/211 (19%), Positives = 87/211 (41%)
Query: 1184 YP-NHLQNGTIQPSELKEILTPVSTKLRIRSKRILRDADVENQNNGCDALHGSSLDIKPN 1242
YP + NGTI + L P S I K + D + E++ N + D P
Sbjct: 1388 YPASGWYNGTIIEISDSDPLFPNSPWENI--KVLWDDTEEEDRVNYWEIDEKFDDDQNPQ 1445
Query: 1243 SLPEVLESDGTNRTSSDRGADGSQRLNAQIDSTSEHDPLGSH---SHSHDPLGSHSHSHS 1299
+ E+ + + + + Q+ Q + P+ ++ S ++ + +++++++
Sbjct: 1446 KIKEIKDENENEKVIENN----QQQQQQQPQQQPQQQPIQNNQQLSINNTNVNNNNNNNN 1501
Query: 1300 RKMFNVVYRRSKTNRDRTNSEGDGGGVGESTLNANNNNFHESATDGSRRTRSMGLKTTTC 1359
N + N + N+ GG+ + + N NNNN + + + G+ T
Sbjct: 1502 NNNNNNNNNNNNNNNNNNNNNSLNGGLVDYSGNNNNNNNNNFNYNSNNNLSMSGILDYT- 1560
Query: 1360 DPDNVSSNLRLEQHNQPEDMYSGH--NRSTS 1388
+ +N ++N +N + Y+G N +TS
Sbjct: 1561 NFNNNNNNFM--NYNMYQGNYNGMMMNNNTS 1589
Score = 66 (28.3 bits), Expect = 2.3e-38, Sum P(7) = 2.3e-38
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 396 FCCAFNANGTVFVTGSSDTLARVWN 420
+C F+ +G ++ TGS D L +VW+
Sbjct: 358 YCLQFDKSGRLYFTGSDDHLVKVWS 382
Score = 63 (27.2 bits), Expect = 4.5e-38, Sum P(6) = 4.5e-38
Identities = 53/224 (23%), Positives = 87/224 (38%)
Query: 1140 NLSGENNDVYSG--DASCKEQQSGFSELNYYD-ESKCVNTTDEDTTPYPNHLQN-GTIQP 1195
N S E +D G D + Q+G L+ D + K N TD D + N G
Sbjct: 1974 NQSNEESDD-DGFIDDNNSSHQNGGKILDDSDNDDKNQNGTDNDYNDDDDDDDNDGDSTN 2032
Query: 1196 SELKEIL--TPVSTKLRIRSKRILRDADVENQNNGCDAL-HGSSLDIKPNS---LPEVLE 1249
+ K I T TK + ++ I D D ++ N D + KP S P+V
Sbjct: 2033 KKRKSIKNQTEPITKRQRTNRLIFEDEDEDDNNQEEDEEDYQEKPKPKPRSKQTTPKVTT 2092
Query: 1250 SDGTNRTSSDRGADGSQRLNAQIDST--SEHDPLGSHSHSHDPLGSHSHSHSRKMFNVVY 1307
R D+ + + ++S S+++ G +S + GS S S++ ++
Sbjct: 2093 PRKRGRKKIDQSEEEEDEDQSDVNSNNNSDNESGGEDGYSGED-GSESESNNGG--DIDD 2149
Query: 1308 RRSKTNRDRTNSEGDGGGVGESTLNANNNNFHESAT-DGSRRTR 1350
++ S+ G G N NNNN + + S+R R
Sbjct: 2150 EEFLNLLEKPKSKPKGRGRPSFKNNNNNNNINNNVNLTPSKRGR 2193
Score = 61 (26.5 bits), Expect = 8.8e-55, Sum P(7) = 8.8e-55
Identities = 29/131 (22%), Positives = 58/131 (44%)
Query: 50 REVYFLIMHFLST--GPCHRTYGQFWNELLEHQLLPRRYHAWYSRSGLPSGDENDDGMSF 107
RE+ +L+ +L++ G + + ++ LLP++ + W + EN
Sbjct: 34 REINYLVYRWLNSQNGIDKNLVTSLFQDFNKNDLLPKKVN-WLGQQ------EN------ 80
Query: 108 PLSYNKLVERYPHIEKDHLVKLLKQLIINTSSPSRAMIGGDAPNAADVPTLLGRGSFSLL 167
+ N+L E+Y HI+ DH+ + I ++ G + + TLLG ++S++
Sbjct: 81 -FTSNELNEKYKHIQSDHI-----KSIFSSYRDLAIQHGHFSKLPFQINTLLGDNAYSMI 134
Query: 168 SYD-RDKGQNE 177
DK N+
Sbjct: 135 PKGFNDKKDND 145
Score = 60 (26.2 bits), Expect = 9.0e-38, Sum P(6) = 9.0e-38
Identities = 41/202 (20%), Positives = 73/202 (36%)
Query: 1073 SKRLKIGEMMPLDANNGSGIHLDD---DKEKESEVNG-HVKPEKDGIDISCGEEITNCGD 1128
SKRL G + +N + DD D S NG + + D D + + D
Sbjct: 1960 SKRLITGRLTRSRSNQSNEESDDDGFIDDNNSSHQNGGKILDDSDNDDKNQNGTDNDYND 2019
Query: 1129 NTDEVPLKNVKNLSGENNDVYSGDASCKEQQSGFSELNYYDESKCVNTTDEDTTPYPNHL 1188
+ D+ + + K Q++ + L + DE + N +ED Y
Sbjct: 2020 DDDDDDNDGDSTNKKRKSIKNQTEPITKRQRT--NRLIFEDEDEDDNNQEEDEEDYQEKP 2077
Query: 1189 QNGTIQPSELKEILTPVSTKLRIRSKRILRDADVENQNNGCDALHGSSLDIKPNSLPEVL 1248
+ P + TP T R R ++ + ++ E + D ++ D +
Sbjct: 2078 K-----PKPRSKQTTPKVTTPRKRGRKKIDQSEEEEDEDQSDVNSNNNSDNESGGEDGYS 2132
Query: 1249 ESDGTNRTSSDRG-ADGSQRLN 1269
DG+ S++ G D + LN
Sbjct: 2133 GEDGSESESNNGGDIDDEEFLN 2154
Score = 60 (26.2 bits), Expect = 9.2e-38, Sum P(7) = 9.2e-38
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 397 CCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVN 447
C +F+ ++ T S+D + R+WN N++ D I L+GH+ VN
Sbjct: 403 CTSFD--NSLLATASNDNVIRIWNL---NSNQYDS----IASLTGHDPSVN 444
Score = 56 (24.8 bits), Expect = 1.5e-16, Sum P(7) = 1.5e-16
Identities = 21/71 (29%), Positives = 32/71 (45%)
Query: 549 SLDNRFVLAAIMDCRICVWNAADGSL--VHSLTGHTESTY-VLDVHPF--NP--RIAMSA 601
S DN + A D I +WN + SLTGH S + F NP R+ +S+
Sbjct: 405 SFDNSLLATASNDNVIRIWNLNSNQYDSIASLTGHDPSVNNTITSISFLSNPTTRLLVSS 464
Query: 602 GYDGKTIVWDI 612
G+ +W++
Sbjct: 465 DSFGQCKLWNL 475
Score = 54 (24.1 bits), Expect = 8.1e-41, Sum P(5) = 8.1e-41
Identities = 22/91 (24%), Positives = 42/91 (46%)
Query: 1570 NESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPTETHLHSPWELFDSDTQWEQ 1629
++ DED DG+ +S + KS D +R Q K + T + SP + + ++
Sbjct: 961 DDDDEDYDS-DGKKMSTRKKSKIKADKRKKRLLKQSK-KFTRRNT-SPSKFNEIMNTFDL 1017
Query: 1630 PRIDDDNRNKLLSAFAKLEQSANRVQDQYGV 1660
P DD+N N ++ +N+ + +Y +
Sbjct: 1018 PEDDDNNSNNNNRKAVSNKRLSNKQKKRYNL 1048
Score = 53 (23.7 bits), Expect = 8.8e-55, Sum P(7) = 8.8e-55
Identities = 19/79 (24%), Positives = 34/79 (43%)
Query: 773 SDDNDSEYNVAEEYXXXXXXXXXXXXXXXXXXXXXDSEDGEN-PMDGLRRSKRKKQKAEV 831
SD +D ++N ++ D +D E+ DG + S RKK K +
Sbjct: 925 SDPSDEDFNPSDASENSSEDEQQQQHQQQQQDDDDDDDDDEDYDSDGKKMSTRKKSKIKA 984
Query: 832 EIMTSSGRRVKRRILDESE 850
+ +R K+R+L +S+
Sbjct: 985 D------KR-KKRLLKQSK 996
Score = 53 (23.7 bits), Expect = 6.3e-07, Sum P(3) = 6.3e-07
Identities = 40/149 (26%), Positives = 60/149 (40%)
Query: 1224 NQNNGCDALHGSSL--DIKPNSL-PEVLESDGT--NRTSSDRGADGSQRLNAQIDS--TS 1276
N NG D +SL D N L P+ + G N TS++ + I S +S
Sbjct: 45 NSQNGIDKNLVTSLFQDFNKNDLLPKKVNWLGQQENFTSNELNEKYKHIQSDHIKSIFSS 104
Query: 1277 EHDPLGSHSH-SHDP------LGSHSHSHSRKMFNVVYRRSKTNRDRTNSEGDGGGVGES 1329
D H H S P LG +++S K FN +D N+ GD + +
Sbjct: 105 YRDLAIQHGHFSKLPFQINTLLGDNAYSMIPKGFN-------DKKDNDNN-GDNNLLNKE 156
Query: 1330 TLNANNNNFHESATDGSR-RTRSMGLKTT 1357
+ NNNN + S++ S T +K +
Sbjct: 157 KIPDNNNNNNSSSSSSSNSNTNKKKIKVS 185
Score = 52 (23.4 bits), Expect = 1.4e-49, Sum P(7) = 1.4e-49
Identities = 43/200 (21%), Positives = 74/200 (37%)
Query: 951 DDSEDVT----KLDT-PESHVNAGIRRLVLKLPVRDSNKHELQERTSDKCNQLVSVIGTS 1005
DD ED K+ T +S + A R+ K ++ S K + + K N++++
Sbjct: 962 DDDEDYDSDGKKMSTRKKSKIKADKRK---KRLLKQSKKFTRRNTSPSKFNEIMNTFDLP 1018
Query: 1006 SEAHQEATEGNGNRVSYVGNNCSSVDANCGLMERRGRGQFDKLEDYLNLSNGYKDGKIRW 1065
+ + N NR + S+ + G + D + YLN + D
Sbjct: 1019 ED--DDNNSNNNNRKAVSNKRLSNKQKKRYNLINDGEIEMDDDDQYLN--DNILDSDDND 1074
Query: 1066 GGVRARSSKRLKIGEMMPLDANNGSGIHLDDDKEKESEVNGHVKPEKDGIDISCGEEITN 1125
R R G + ++G G DDD + S+ + +G D +N
Sbjct: 1075 YEHRNRYDNDEFSGSES-YNGSDGGGGGGDDDSDNSSDNSSENDSSANGSDSDYSGSKSN 1133
Query: 1126 C---GDNT--DEVPLKNVKN 1140
GD + ++ KNVKN
Sbjct: 1134 KNKRGDKSKRNKKGKKNVKN 1153
Score = 51 (23.0 bits), Expect = 7.4e-37, Sum P(6) = 7.4e-37
Identities = 56/291 (19%), Positives = 97/291 (33%)
Query: 1113 DGIDISCGEEITNCGDNTDE-VPLKNVKNLSGENNDVYSGDASCKEQQSGFSELNYYDES 1171
D D S +TN D+ D+ + N N N D GD S + + S+
Sbjct: 1857 DDEDDSMVSGVTNDDDDDDDNLANNNHGNNKSRNGDGLEGDISISDSEHDNSKTGKNITR 1916
Query: 1172 KCVNTTDEDTTPYPNHL--QNGTIQPSELKEILTPVSTKLRIRSKRILRDADVENQNNGC 1229
++ ++++ N + G + + T +T SKR++ +++N
Sbjct: 1917 SLLSPSEDEGGINVNRTPSKRGRKKANATTTTTTTTTTTSSTPSKRLITGRLTRSRSNQS 1976
Query: 1230 DALHGSSLDIKPNSLPEVLESDGTNRTSSDRGADGSQRLNAQIDSTSEHDPLGSHSHSHD 1289
+ I N+ ++ G SD D + D + D + D
Sbjct: 1977 NEESDDDGFIDDNNSSH--QNGGKILDDSDN--DDKNQNGTDNDYNDDDD---DDDNDGD 2029
Query: 1290 PLGSHSHSHSRKMFNVVYRRSKTNR--------DRTNSEGDGGGVGESTL-NANNNNFHE 1340
S + + +R +TNR D N E D E +
Sbjct: 2030 STNKKRKS-IKNQTEPITKRQRTNRLIFEDEDEDDNNQEEDEEDYQEKPKPKPRSKQTTP 2088
Query: 1341 SATDGSRRTRS---MGLKTTTCDPDNVSSNLRLEQHNQPEDMYSGHNRSTS 1388
T +R R + D +V+SN + + ED YSG + S S
Sbjct: 2089 KVTTPRKRGRKKIDQSEEEEDEDQSDVNSNNNSDNESGGEDGYSGEDGSES 2139
Score = 50 (22.7 bits), Expect = 1.1e-49, Sum P(7) = 1.1e-49
Identities = 11/48 (22%), Positives = 21/48 (43%)
Query: 1290 PLGSHSHSHSRKMFNVVYRRSKTNRDRTNSEGDGGGVGESTLNANNNN 1337
P G S+ ++ + N + + N + N+ + + N NNNN
Sbjct: 1239 PNGIESNLDNKSIVNYILNNNNINNNNNNNNNNNNNNNNN--NNNNNN 1284
Score = 50 (22.7 bits), Expect = 9.3e-37, Sum P(7) = 9.3e-37
Identities = 10/44 (22%), Positives = 19/44 (43%)
Query: 227 STMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIW 270
ST+ + + + GH + + +++GS D V IW
Sbjct: 577 STLFNPPKLVNTLEGHPTTILALQYSHGSDAIVSGSYDGTVIIW 620
Score = 50 (22.7 bits), Expect = 9.9e-36, Sum P(5) = 9.9e-36
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 808 DSEDGENPMDGLRRSKRKKQKAEVEIMTSSGRRVKRRIL-DESE 850
D +D +N D + KRK K + E +T +R R I DE E
Sbjct: 2020 DDDDDDNDGDSTNK-KRKSIKNQTEPITKR-QRTNRLIFEDEDE 2061
Score = 50 (22.7 bits), Expect = 1.9e-14, Sum P(7) = 1.9e-14
Identities = 15/66 (22%), Positives = 26/66 (39%)
Query: 308 IIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPR 367
+IRVW DG + HT+ V + P + ++SS D +W + +
Sbjct: 677 MIRVWNSLDGSFHLEMAEHTSEVYVTSCHPFDSRL--IMSSGYDSQVILWSIETGEIIKK 734
Query: 368 IYIPRP 373
+ P
Sbjct: 735 FVLQEP 740
Score = 50 (22.7 bits), Expect = 8.2e-14, Sum P(6) = 8.2e-14
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 561 DCRICVWNAADGSLVHSLTGHTESTYVLDV-HPFNPRIAMSAGYDGKTIVWDI 612
D + VW+ G L+ +L GH + D+ F+ + +A D +W++
Sbjct: 375 DHLVKVWSTYSGRLIATLRGHLGD--ITDMCTSFDNSLLATASNDNVIRIWNL 425
Score = 48 (22.0 bits), Expect = 1.3e-13, Sum P(6) = 1.3e-13
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 242 HRNAVY---CAIFDRSGRYVITGSDDRLVKIWSMET 274
H + VY C FD R +++ D V +WS+ET
Sbjct: 695 HTSEVYVTSCHPFD--SRLIMSSGYDSQVILWSIET 728
Score = 45 (20.9 bits), Expect = 5.6e-40, Sum P(7) = 5.6e-40
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 1016 NGNRVSYVGNNCSSVDANCGLMERRGRGQFDKLEDYLNLSN 1056
NG V Y GNN ++ + N L DY N +N
Sbjct: 1525 NGGLVDYSGNNNNNNNNNFNYNSNNNLSMSGIL-DYTNFNN 1564
Score = 43 (20.2 bits), Expect = 1.1e-48, Sum P(7) = 1.1e-48
Identities = 18/85 (21%), Positives = 30/85 (35%)
Query: 768 ENEVQSDDNDSEYNVAEEYXXXXXXXXXXXXXXXXXXXXXDSEDGENPMDGLRRSKRKKQ 827
+N + SDDND E+ Y D +D +N D +
Sbjct: 1065 DNILDSDDNDYEHR--NRYDNDEFSGSESYNGSDGGGGGGD-DDSDNSSDNSSENDSSAN 1121
Query: 828 KAEVEIMTSSGRRVKRRILDESEGN 852
++ + S + KR D+S+ N
Sbjct: 1122 GSDSDYSGSKSNKNKRG--DKSKRN 1144
Score = 41 (19.5 bits), Expect = 4.8e-48, Sum P(6) = 4.8e-48
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 768 ENEVQSDDNDSEYNVAEEY 786
+ ++ SDD+DS+ + + Y
Sbjct: 1288 DQQINSDDDDSQKIIKKSY 1306
Score = 40 (19.1 bits), Expect = 5.3e-50, Sum P(7) = 5.3e-50
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 1720 DLSTKIKRLSDLVTRTLSSL 1739
D+ST IKRL R+L ++
Sbjct: 1765 DISTIIKRLESSYYRSLDAI 1784
Score = 40 (19.1 bits), Expect = 1.6e-45, Sum P(7) = 1.6e-45
Identities = 12/47 (25%), Positives = 19/47 (40%)
Query: 1632 IDDDNRNKLLSAFAKLEQSANRVQDQYGVQKLKQVSQKTNF--TNRF 1676
+D +N N + + + N+ Q Q Q TN+ TN F
Sbjct: 1594 LDPNNSNMYMQTYPQNSTMQNQQQPQLNNIYYNSQLQPTNYNYTNNF 1640
Score = 40 (19.1 bits), Expect = 1.3e-34, Sum P(5) = 1.3e-34
Identities = 13/65 (20%), Positives = 28/65 (43%)
Query: 1626 QWEQPRIDDDNRNKLLSAFAKLEQSANRVQDQYGVQKLKQVSQKTNFTNRFPVPLSLDVI 1685
Q +Q DDD+ ++ + K + + + + +K + + Q FT R P + I
Sbjct: 952 QQQQDDDDDDDDDEDYDSDGKKMSTRKKSKIKADKRKKRLLKQSKKFTRRNTSPSKFNEI 1011
Query: 1686 QSRLE 1690
+ +
Sbjct: 1012 MNTFD 1016
Score = 39 (18.8 bits), Expect = 1.3e-34, Sum P(5) = 1.3e-34
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 808 DSEDGENPMDGLRRSKRKKQKAEVEIMTSSGRRVKRRILDESE 850
D+ E+ D + K K + + ++ R+ R+ +D+SE
Sbjct: 2063 DNNQEEDEEDYQEKPKPKPRSKQTTPKVTTPRKRGRKKIDQSE 2105
Score = 37 (18.1 bits), Expect = 2.2e-48, Sum P(7) = 2.2e-48
Identities = 9/44 (20%), Positives = 20/44 (45%)
Query: 1332 NANNNNFHESATDGSRRTRSMGLKTTTCDPDNVSSNLRLEQHNQ 1375
N NNNN + + + + + G+ + D+ S +++ Q
Sbjct: 1264 NNNNNNNNNNNNNNNNNNNNNGVDDQQINSDDDDSQKIIKKSYQ 1307
Score = 37 (18.1 bits), Expect = 1.1e-39, Sum P(7) = 1.1e-39
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 1312 TNRDRTNSEGDGGGVGESTLNANNNNFHES 1341
T + +N+ + + N NNNNF ++
Sbjct: 1680 TTTETSNNNNNNNNNNNN--NNNNNNFKDN 1707
>MGI|MGI:1890651 [details] [associations]
symbol:Brwd1 "bromodomain and WD repeat domain containing 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007010 "cytoskeleton organization" evidence=ISO] [GO:0008360
"regulation of cell shape" evidence=ISO] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
MGI:MGI:1890651 GO:GO:0005634 GO:GO:0005737 GO:GO:0007010
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006357
GO:GO:0006351 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 CTD:54014 HOVERGEN:HBG080933 KO:K11798
ChiTaRS:BRWD1 EMBL:AJ292467 EMBL:AJ292468 EMBL:AC144797
EMBL:AC152502 IPI:IPI00121655 IPI:IPI01007673 RefSeq:NP_001096649.1
RefSeq:NP_660107.2 UniGene:Mm.240871 UniGene:Mm.482469
ProteinModelPortal:Q921C3 SMR:Q921C3 IntAct:Q921C3
PhosphoSite:Q921C3 PRIDE:Q921C3 Ensembl:ENSMUST00000023631
Ensembl:ENSMUST00000099502 Ensembl:ENSMUST00000113829 GeneID:93871
KEGG:mmu:93871 UCSC:uc008aci.2 UCSC:uc008ack.2
GeneTree:ENSGT00700000104382 HOGENOM:HOG000095265 InParanoid:Q921C3
NextBio:351749 Bgee:Q921C3 CleanEx:MM_BRWD1 Genevestigator:Q921C3
GermOnline:ENSMUSG00000022914 Uniprot:Q921C3
Length = 2304
Score = 343 (125.8 bits), Expect = 4.6e-54, Sum P(4) = 4.6e-54
Identities = 115/438 (26%), Positives = 196/438 (44%)
Query: 306 DCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFS 365
DC++++W +G +S LRGH+A ++ +A + + + S D R+W R +
Sbjct: 207 DCLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTLI---AAGSCDKIIRVWCLRTC--A 261
Query: 366 PRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTV-FVTGSSDTLARVWNACKP 424
P + + ++ +P + GPQ + + + A+GTV F ++L + +P
Sbjct: 262 PVAVLQGHTGSITSLQFSPMAK-GPQRYMV---STGADGTVCFWQWDLESLKF---SPRP 314
Query: 425 NTDDSDQPNHEIDVLSGHENDVNYVQFSGCA--VASRFSLA-DSSK-----EDSTPKFKN 476
+++P + +L + +G V + L D+ + E T K +
Sbjct: 315 -LKFTEKPRPGVQMLCSSFSVGGMFLATGSTDHVIRMYFLGFDAPEKIAELESHTDKVDS 373
Query: 477 SWFCH--DNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVXXXXXXXXXXXXXXXX 534
FC+ D ++ SRDG+A IW R+ Q +
Sbjct: 374 IQFCNNGDRFLSGSRDGTARIW------------RFEQLEWRSILLDMSARISGDTSSEE 421
Query: 535 XILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFN 594
P+ V MI W+ D+ V+ A+ D + VW++ G L+H+L GH + +VL+ HPF+
Sbjct: 422 ERFMKPK-VTMIAWNQDDSTVVTAVNDHVLKVWSSYTGQLLHNLLGHADEVFVLETHPFD 480
Query: 595 PRIAMSAGYDGKTIVWDIWEGIPIR-------------IYEISRFRDGASIILSDDVGQL 641
RI +SAG+DG +WDI +GI ++ +++ +DG +D G L
Sbjct: 481 SRIMLSAGHDGSIFIWDITKGIKMKHYFNMIEGQGHGAVFDCKFSQDGQHFACTDSHGHL 540
Query: 642 YILNTGQGESQKDAKYDQFFLGDYRPLVQDTYGNVLDQETQLAPHRRNLQDP--LCDSAM 699
I G + + FF DYRPL++D+ VLD++TQ APH L P L D
Sbjct: 541 LIFGFGCSKPYEKIPDQMFFHTDYRPLIRDSNNYVLDEQTQQAPH---LMPPPFLVDVDG 597
Query: 700 IPYPEPYQTMYQQRRLGA 717
P+P +Q + R A
Sbjct: 598 NPHPTKFQRLVPGRENSA 615
Score = 330 (121.2 bits), Expect = 1.7e-51, Sum P(5) = 1.7e-51
Identities = 103/329 (31%), Positives = 157/329 (47%)
Query: 103 DGMSFPLSYNKLVERYPHIEKDHLVKLLKQLIINTSSPSRAMIGGDAP-NAADVPTLLGR 161
+G SY +LV H+ DHL+++ +++ P M+ + P + + V +LLG
Sbjct: 55 EGNEHNRSYEELVLSNKHVAPDHLLQICQRI-----GP---MLDKEVPPSISRVTSLLGA 106
Query: 162 GSFSLLSYDRDKGQNEIDHPPA----HM-RWPHMYADQVRGLGLREIGGGFTRHHRAPSI 216
G SLL +D ++ + A H R P M + L EI HR +
Sbjct: 107 GRQSLLRTAKDC-RHTVWKGSAFAALHRGRPPEMPVNYGPPPSLVEI-------HRGRQL 158
Query: 217 RA-ACYAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETA 275
+ ++ A P TM Q ++ +R+ GH +AVYC FDR+G + TGSDD LVKIWS
Sbjct: 159 TGCSTFSTAFPGTMYQHIKMHRRILGHLSAVYCVAFDRTGHRIFTGSDDCLVKIWSTHNG 218
Query: 276 YCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAF 335
L++ RGH +I+D D IIRVW L P++VL+GHT ++T++ F
Sbjct: 219 RLLSTLRGHSAEISDMAVNYENTLIAAGSCDKIIRVWCLRTCAPVAVLQGHTGSITSLQF 278
Query: 336 SPRP-GSVYQLLSSSDDGTCRIW--DARYSQFSPRI--YIPRPSDAVAGRNMAPSSSAGP 390
SP G ++S+ DGT W D +FSPR + +P V
Sbjct: 279 SPMAKGPQRYMVSTGADGTVCFWQWDLESLKFSPRPLKFTEKPRPGV------------- 325
Query: 391 QSHQIFCCAFNANGTVFVTGSSDTLARVW 419
Q+ C +F+ G TGS+D + R++
Sbjct: 326 ---QMLCSSFSVGGMFLATGSTDHVIRMY 351
Score = 263 (97.6 bits), Expect = 4.6e-54, Sum P(4) = 4.6e-54
Identities = 99/346 (28%), Positives = 152/346 (43%)
Query: 1295 SHSHSRKMFNVVYRRSKTNRDRTN-SEGD--GGGVGESTLNANNNNFHESATDGSRRTRS 1351
S S R S+ N D+ S G+ G V T + S D R R
Sbjct: 792 SQSRQRTCRRKYANYSRRNADQCELSSGNESSGSVRHETSYDQSEGSCSSEDDEWRNDRR 851
Query: 1352 MGLKT-TTCDPDNVSSNLRLEQ--HNQPEDMYSGHNRSTSRCQLPHEEWGSSSKMTVGLR 1408
G + ++ D + S+ + + QP S R T C +E S ++ R
Sbjct: 852 SGSDSDSSSDSSSQYSDWTADTGINLQPPLRMSCRRRVTRFCSTSEDEM-SMENISPPKR 910
Query: 1409 STRNRRTSYLFCDS----SPID-RRKTH-QSLRKGSWLMLSTHEEGSRYIPQLGDEVVYL 1462
+ R+ S +S +P + H W+ +T + S ++PQ+GDEV+Y
Sbjct: 911 RRKRRKESKPKRESLRRMTPAELANMEHLYEFHPPVWITDTTLRK-SPFVPQMGDEVMYF 969
Query: 1463 RQGHQEYIN-------YSGSREVGPWITVKGNIRAVEFCKVESLEYATASGSGDSCCKMT 1515
RQGH+ YI Y + PW K ++R E K+ L Y G CC +
Sbjct: 970 RQGHEAYIEAVRRNNIYELNPHKEPWR--KMDLRDQELVKIVGLRYEV--GPPTLCC-LK 1024
Query: 1516 LKFIDP-TSSVSNMTFRLTLPEVTGFPDFLVERTRFDAAIQRNWTCRDKCKVWWKNESDE 1574
L FIDP T +++ +F + ++ DFLV R +D A QRNW D+ + S
Sbjct: 1025 LAFIDPATGRLTDKSFSIRYHDMPDVIDFLVLRQFYDEARQRNWQPCDRFR------SII 1078
Query: 1575 DGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPTETHLHSPWEL 1620
D +WW G VLS +P ++PDS ++ Y V++ + TET SPW++
Sbjct: 1079 DDAWWFGTVLSQEPYQPQYPDSHFQCYIVRW--DNTETEKLSPWDM 1122
Score = 116 (45.9 bits), Expect = 4.6e-54, Sum P(4) = 4.6e-54
Identities = 32/94 (34%), Positives = 49/94 (52%)
Query: 40 PAELDVDVDLREVYFLIMHFLSTGPCHRTYGQFWNELLEHQLLPRRYHAWYSRSGLPSGD 99
PA V + E+YFLI +LS GPC R EL ++QLLP+R W G+
Sbjct: 6 PARRPVPLIESELYFLIARYLSAGPCRRAAQVLVQELEQYQLLPKRLD-W-------EGN 57
Query: 100 ENDDGMSFPLSYNKLVERYPHIEKDHLVKLLKQL 133
E++ SY +LV H+ DHL+++ +++
Sbjct: 58 EHNR------SYEELVLSNKHVAPDHLLQICQRI 85
Score = 113 (44.8 bits), Expect = 3.2e-38, Sum P(3) = 3.2e-38
Identities = 75/335 (22%), Positives = 131/335 (39%)
Query: 1430 THQSLRKGSWLMLSTHEEGSRYIPQLGDEVVYLRQGHQEYINYSGSREVGPWITVKGNIR 1489
T +LRK ++ E Y Q G E Y+ + I Y + PW K ++R
Sbjct: 949 TDTTLRKSPFVPQMGDEV--MYFRQ-GHEA-YIEAVRRNNI-YELNPHKEPWR--KMDLR 1001
Query: 1490 AVEFCKVESLEYATASGSGDSCCKMTLKFIDPTSSVSNMTFRLTLPEVTGFPDFLVERTR 1549
E K+ L Y G CC T +++ +F + ++ DFLV R
Sbjct: 1002 DQELVKIVGLRYEV--GPPTLCCLKLAFIDPATGRLTDKSFSIRYHDMPDVIDFLVLRQF 1059
Query: 1550 FDAAIQRNWTCRDKCK-----VWWKNE--SDE-------DGSW------WDG-RVLSVKP 1588
+D A QRNW D+ + WW S E D + WD + P
Sbjct: 1060 YDEARQRNWQPCDRFRSIIDDAWWFGTVLSQEPYQPQYPDSHFQCYIVRWDNTETEKLSP 1119
Query: 1589 KSSE-FPDS--PWERY--TVQYKTEPTETHLHSPWELFDSDTQWEQPRIDDDNRNKLLSA 1643
E PD+ P E ++ ++ E L+ P E +W Q R D+ ++++S
Sbjct: 1120 WDMEPIPDNVDPPEELGASISVTSDELEKLLYKPQE-----GEWGQ-RSRDEECDRIISG 1173
Query: 1644 FAKLEQSANRVQDQYGVQKLKQVSQKTNFTNRFPVPLSLDVIQSRLENNYYRGLEAVKHD 1703
++Q N + + + P L I+ RL N +YR L A+ +
Sbjct: 1174 ---IDQLLN-LDIAAAFAGPVDLCTYPKYCTVVAYPTDLYTIRMRLVNRFYRRLSALIWE 1229
Query: 1704 IAVMLSNAESYFGRNTDLSTKIKRLSDLVTRTLSS 1738
+ + NA ++ + ++ K+++D + + + +
Sbjct: 1230 VRYIEHNARTFNEPESVIARSAKKITDQLLKFIKN 1264
Score = 66 (28.3 bits), Expect = 5.3e-31, Sum P(5) = 5.3e-31
Identities = 30/101 (29%), Positives = 51/101 (50%)
Query: 1317 TNSEGDGGGVGESTLNANNNNFHESATDGSRRTRSMGLKTTTCDPDNVSSNLRLEQHNQP 1376
T+ + DGG V E + + N N S +G RR S + ++ D + SNL++ Q + P
Sbjct: 1853 TDVDSDGGAVREKSYS--NENGSVSLENGQRRKVS---RKSSSDKE---SNLQVTQKS-P 1903
Query: 1377 EDMYSGHNRSTSRCQLPHEEWG-SSSKMTVGLRS--TRNRR 1414
+D S +R T R + ++ +S + L S TR++R
Sbjct: 1904 KDR-SSPSRITQRASVATDKMKLTSDAEDLSLESVCTRSKR 1943
Score = 65 (27.9 bits), Expect = 3.1e-24, Sum P(5) = 3.1e-24
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWN 420
++C AF+ G TGS D L ++W+
Sbjct: 189 VYCVAFDRTGHRIFTGSDDCLVKIWS 214
Score = 65 (27.9 bits), Expect = 3.1e-24, Sum P(5) = 3.1e-24
Identities = 31/141 (21%), Positives = 49/141 (34%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMET----AYCLASCRGHEGD-- 287
+ I + H + V F +G ++GS D +IW E + L GD
Sbjct: 359 EKIAELESHTDKVDSIQFCNNGDRFLSGSRDGTARIWRFEQLEWRSILLDMSARISGDTS 418
Query: 288 ----------ITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSP 337
+T D +++VW G + L GH V + P
Sbjct: 419 SEEERFMKPKVTMIAWNQDDSTVVTAVNDHVLKVWSSYTGQLLHNLLGHADEVFVLETHP 478
Query: 338 RPGSVYQLLSSSDDGTCRIWD 358
+ +LS+ DG+ IWD
Sbjct: 479 FDSRI--MLSAGHDGSIFIWD 497
Score = 55 (24.4 bits), Expect = 4.6e-54, Sum P(4) = 4.6e-54
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 1679 PLSLDVIQSRLE-NNYYRGLEAVKHDIAVMLSNAESYF-GRNTDLSTKIKRLSDLVTRTL 1736
P+ ++ LE NY +E K DI ++ SNA++Y + + + + RLS L +
Sbjct: 1359 PMDFGTVRETLEAGNYDSPVEFCK-DIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKM 1417
Query: 1737 SSL 1739
+
Sbjct: 1418 KKI 1420
Score = 43 (20.2 bits), Expect = 1.1e-28, Sum P(5) = 1.1e-28
Identities = 21/87 (24%), Positives = 29/87 (33%)
Query: 1331 LNANNNNFHESATDGSRRTRSMGLKTTTCDPDNVSSNLRLEQHNQPEDMYSGHNRSTSRC 1390
LN+ + E S ++R MG P SS+ L Q N S
Sbjct: 2002 LNSGGGSSFEQRK--SIQSRQMGAVCVRPPPKTQSSSAGLSQENARSQTLDSETSLPSES 2059
Query: 1391 QLPHE---EWGSSSKMTVGLRSTRNRR 1414
L + E ++ GLR RR
Sbjct: 2060 VLTQKATVESNFEEELNYGLRRWNGRR 2086
Score = 41 (19.5 bits), Expect = 1.4e-29, Sum P(4) = 1.4e-29
Identities = 34/200 (17%), Positives = 70/200 (35%)
Query: 933 RSLLNEQRKHSKGKGISLDDSEDV--TKLDTPESHVNAGIRRLVLKLPVRDSNKHELQER 990
++ L+ + KH+ + +++ KL PE +A + ++R
Sbjct: 1957 KTALSSEEKHAH---CEVPEAQPACRNKLPEPEHQDSAENPSQAASADLNSGGGSSFEQR 2013
Query: 991 TSDKCNQLVSVIGTSSEAHQEATEGNGNRVSYVGNNCSSVDANCGLMERRGRGQFDKLED 1050
S + Q+ +V Q ++ G +S ++D+ L Q +E
Sbjct: 2014 KSIQSRQMGAVCVRPPPKTQSSSAG----LSQENARSQTLDSETSLPSESVLTQKATVES 2069
Query: 1051 YLNLSNGYKDGKIRWGGVRARSSKRLKIGEMMPLDANNGSGIHLDDDKEKESEVNGHVKP 1110
N G RW G R R+ + + + + + + + + + P
Sbjct: 2070 --NFEEELNYGLRRWNGRRLRTYGKAPLSRTAQVTPSLQASAEVGVKRRR-------MHP 2120
Query: 1111 EKDGIDISCGEEITNCGDNT 1130
E DG D+ + CG +T
Sbjct: 2121 EVDGEDVPGQMGSSGCGPDT 2140
Score = 40 (19.1 bits), Expect = 5.3e-31, Sum P(5) = 5.3e-31
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 808 DSEDGENPMDGLRRSKRKKQKAEVEIMTSSGRRVKRRI 845
D + G+ + LRRS+R KQ+ RR +R +
Sbjct: 1423 DFKIGQKFKEKLRRSQRFKQRQNCNGAVPGDRR-RRNV 1459
Score = 40 (19.1 bits), Expect = 1.7e-29, Sum P(4) = 1.7e-29
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 967 NAGIRRLVLKLPVRDSN 983
N GIR + KLP R ++
Sbjct: 2245 NVGIRTISRKLPYRQAS 2261
Score = 39 (18.8 bits), Expect = 1.7e-51, Sum P(5) = 1.7e-51
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 979 VRDSNKHELQERT 991
+RDSN + L E+T
Sbjct: 568 IRDSNNYVLDEQT 580
Score = 38 (18.4 bits), Expect = 2.8e-29, Sum P(4) = 2.8e-29
Identities = 34/155 (21%), Positives = 57/155 (36%)
Query: 1229 CDALHGSSLDIKPNSLPEVLESDGTNRTSSDRGADGSQR---LNAQIDST--SEHDPLGS 1283
C A+ S + + ++ ES + R R A R L+ D + SE + L
Sbjct: 1637 CAAVAASKIKLMSDAEDSSSESPCSGRKLPHRNASAVARKKLLHNSDDQSLKSETEELKD 1696
Query: 1284 HSHSHDPLGSHSHSHSRKMFNVVYRRSKTNRDRTNSEGDGGGVGESTLNANNNNFHESAT 1343
+ S G HS H+ + + R N+ G +T + ES+
Sbjct: 1697 QNQSLLISGPHS-VHNSISDSESDSDLRATRKTWNANGCTSHTA-ATCKTKSRPI-ESSE 1753
Query: 1344 DGSRRTRSMGLKTTTCDPDNVSSNLRLEQHNQPED 1378
+ SR S ++T DP LR + ++ D
Sbjct: 1754 EDSRCHGSDHGPSSTGDPSTSGQKLRADSISEEAD 1788
Score = 38 (18.4 bits), Expect = 2.1e-22, Sum P(4) = 2.1e-22
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 337 PRPGSVYQLLSSSDDGTCRIWDARYSQ 363
P+ + L+S S TCR A YS+
Sbjct: 782 PQKSNSMVLVSQSRQRTCRRKYANYSR 808
Score = 38 (18.4 bits), Expect = 1.6e-21, Sum P(5) = 1.6e-21
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 555 VLAAIMDCRICVWNAADGSLVH 576
+L DCR VW + + +H
Sbjct: 111 LLRTAKDCRHTVWKGSAFAALH 132
Score = 37 (18.1 bits), Expect = 5.3e-31, Sum P(5) = 5.3e-31
Identities = 17/54 (31%), Positives = 22/54 (40%)
Query: 1210 RIRSKR--ILRDADVENQNNGCDALHGSSLDIKPNSLPEVLESDGTNRTSSDRG 1261
R+R +R +LR V + D L SS NS E S G +S G
Sbjct: 1516 RVRRQRPEVLRSGSVLFGSEMEDFLATSSSSSASNSSEESKASPGARESSLRSG 1569
Score = 37 (18.1 bits), Expect = 3.5e-29, Sum P(4) = 3.5e-29
Identities = 26/117 (22%), Positives = 41/117 (35%)
Query: 1242 NSLPEVLESDGTNRTSSDRGADGSQRLNAQIDSTS--EHDPLGSHSHSHDPLGSHSHSHS 1299
N LPE D S AD + + + + +G+ P + S S
Sbjct: 1980 NKLPEPEHQDSAENPSQAASADLNSGGGSSFEQRKSIQSRQMGAVC-VRPPPKTQSSSAG 2038
Query: 1300 RKMFNVVYRRSKTNRDRTNSEGDGGGVGESTLNANNNNFHESATDGSRRTRSMGLKT 1356
N RS+T T+ + ++T+ +N F E G RR L+T
Sbjct: 2039 LSQENA---RSQTLDSETSLPSESVLTQKATVESN---FEEELNYGLRRWNGRRLRT 2089
Score = 37 (18.1 bits), Expect = 2.0e-14, Sum P(4) = 2.0e-14
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 103 DGMSFPLSYNKLVERYPHIEKDHLVKLL 130
DG P + +LV + +HLV L
Sbjct: 596 DGNPHPTKFQRLVPGRENSADEHLVPQL 623
>RGD|1309030 [details] [associations]
symbol:Brwd1 "bromodomain and WD repeat domain containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0007010 "cytoskeleton organization" evidence=IEA;ISO]
[GO:0008360 "regulation of cell shape" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 RGD:1309030 GO:GO:0005737 GO:GO:0007010 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0008360
InterPro:IPR019775 GO:GO:0006357 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 OMA:NDNGERS OrthoDB:EOG470TGD
GeneTree:ENSGT00700000104382 EMBL:AC112406 IPI:IPI00762963
Ensembl:ENSRNOT00000002231 UCSC:RGD:1309030 ArrayExpress:D4AAI9
Uniprot:D4AAI9
Length = 2303
Score = 343 (125.8 bits), Expect = 1.8e-52, Sum P(5) = 1.8e-52
Identities = 114/438 (26%), Positives = 192/438 (43%)
Query: 306 DCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFS 365
DC++++W +G +S LRGH+A ++ +A + + + S D R+W R +
Sbjct: 207 DCLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTLI---AAGSCDKIIRVWCLRTC--A 261
Query: 366 PRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTV-FVTGSSDTLA------RV 418
P + + ++ +P + GPQ + + + A+GTV F ++L +
Sbjct: 262 PVAVLQGHTGSITSLQFSPMAK-GPQRYMV---STGADGTVCFWQWDLESLKFSPRPLKF 317
Query: 419 WNACKPNTDD--SDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTPKFKN 476
+P S + + +G + V + F G + + E T K +
Sbjct: 318 TEKPRPGVQMLCSSFSVGGMFLATGSTDHVIRMYFLGFEAPEKIA----ELESHTDKVDS 373
Query: 477 SWFCH--DNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVXXXXXXXXXXXXXXXX 534
FC+ D ++ SRDG+A IW R+ Q +
Sbjct: 374 IQFCNNGDRFLSGSRDGTARIW------------RFEQLEWKSILLDMAARISGDTSAEE 421
Query: 535 XILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFN 594
P+ V MI W+ D+ V+ A+ D + VW++ G L+H+L GH + +VL+ HPF+
Sbjct: 422 ERFMKPK-VTMIAWNQDDSTVVTAVNDHVLKVWSSYTGQLLHNLLGHADEVFVLETHPFD 480
Query: 595 PRIAMSAGYDGKTIVWDIWEGIPIR-------------IYEISRFRDGASIILSDDVGQL 641
RI +SAG+DG +WDI +GI ++ +++ +DG +D G L
Sbjct: 481 SRIMLSAGHDGSIFIWDITKGIKMKHYFNMIEGQGHGAVFDCKFSQDGQHFACTDSHGHL 540
Query: 642 YILNTGQGESQKDAKYDQFFLGDYRPLVQDTYGNVLDQETQLAPHRRNLQDP--LCDSAM 699
I G + + FF DYRPL++D+ VLD++TQ APH L P L D
Sbjct: 541 LIFGFGCSKPYEKIPDQMFFHTDYRPLIRDSNNYVLDEQTQQAPH---LMPPPFLVDVDG 597
Query: 700 IPYPEPYQTMYQQRRLGA 717
P+P +Q + R A
Sbjct: 598 NPHPTKFQRLVPGRENSA 615
Score = 332 (121.9 bits), Expect = 2.1e-50, Sum P(6) = 2.1e-50
Identities = 103/329 (31%), Positives = 158/329 (48%)
Query: 103 DGMSFPLSYNKLVERYPHIEKDHLVKLLKQLIINTSSPSRAMIGGDAP-NAADVPTLLGR 161
+G SY +LV H+ DHL+++ +++ P M+ +AP + + V +LLG
Sbjct: 55 EGNEHNRSYEELVLSNKHVAPDHLLQICQRI-----GP---MLDKEAPPSISRVTSLLGA 106
Query: 162 GSFSLLSYDRDKGQNEIDHPPA----HM-RWPHMYADQVRGLGLREIGGGFTRHHRAPSI 216
G SLL +D ++ + A H R P M + L +I HR +
Sbjct: 107 GRQSLLRTAKDC-RHTVWKGSAFAALHRGRPPEMPVNYGPPPSLVDI-------HRGKQL 158
Query: 217 RA-ACYAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETA 275
+ ++ A P TM Q ++ +R+ GH +AVYC FDR+G + TGSDD LVKIWS
Sbjct: 159 TGCSTFSTAFPGTMYQHIKMHRRILGHLSAVYCVAFDRTGHRIFTGSDDCLVKIWSTHNG 218
Query: 276 YCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAF 335
L++ RGH +I+D D IIRVW L P++VL+GHT ++T++ F
Sbjct: 219 RLLSTLRGHSAEISDMAVNYENTLIAAGSCDKIIRVWCLRTCAPVAVLQGHTGSITSLQF 278
Query: 336 SPRP-GSVYQLLSSSDDGTCRIW--DARYSQFSPRI--YIPRPSDAVAGRNMAPSSSAGP 390
SP G ++S+ DGT W D +FSPR + +P V
Sbjct: 279 SPMAKGPQRYMVSTGADGTVCFWQWDLESLKFSPRPLKFTEKPRPGV------------- 325
Query: 391 QSHQIFCCAFNANGTVFVTGSSDTLARVW 419
Q+ C +F+ G TGS+D + R++
Sbjct: 326 ---QMLCSSFSVGGMFLATGSTDHVIRMY 351
Score = 255 (94.8 bits), Expect = 1.8e-52, Sum P(5) = 1.8e-52
Identities = 66/190 (34%), Positives = 101/190 (53%)
Query: 1439 WLMLSTHEEGSRYIPQLGDEVVYLRQGHQEYIN-------YSGSREVGPWITVKGNIRAV 1491
W+ +T + S ++PQ+GDEV+Y RQGH+ YI Y + PW K ++R
Sbjct: 947 WITDTTLRK-SPFVPQMGDEVMYFRQGHEAYIEAVRRNNIYELNPNKEPWR--KMDLRDQ 1003
Query: 1492 EFCKVESLEYATASGSGDSCCKMTLKFIDP-TSSVSNMTFRLTLPEVTGFPDFLVERTRF 1550
E K+ L Y G CC + L FIDP T +++ +F + ++ DFLV R +
Sbjct: 1004 ELVKIVGLRYEV--GPPTLCC-LKLAFIDPATGRLTDKSFSIRYHDMPDVIDFLVLRQFY 1060
Query: 1551 DAAIQRNWTCRDKCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPT 1610
D A QRNW D+ + S D +WW G VLS +P ++PDS ++ Y+V++ + T
Sbjct: 1061 DEARQRNWQPSDRFR------SIIDDAWWFGTVLSQEPYQPQYPDSHFQCYSVRW--DNT 1112
Query: 1611 ETHLHSPWEL 1620
E SPW++
Sbjct: 1113 EIEKLSPWDM 1122
Score = 119 (46.9 bits), Expect = 9.9e-38, Sum P(5) = 9.9e-38
Identities = 73/330 (22%), Positives = 131/330 (39%)
Query: 1430 THQSLRKGSWLMLSTHEEGSRYIPQLGDEVVYLRQGHQEYINYSGSREVGPWITVKGNIR 1489
T +LRK ++ E Y Q G E Y+ + I Y + PW K ++R
Sbjct: 949 TDTTLRKSPFVPQMGDEV--MYFRQ-GHEA-YIEAVRRNNI-YELNPNKEPWR--KMDLR 1001
Query: 1490 AVEFCKVESLEYATASGSGDSCCKMTLKFIDPTSSVSNMTFRLTLPEVTGFPDFLVERTR 1549
E K+ L Y G CC T +++ +F + ++ DFLV R
Sbjct: 1002 DQELVKIVGLRYEV--GPPTLCCLKLAFIDPATGRLTDKSFSIRYHDMPDVIDFLVLRQF 1059
Query: 1550 FDAAIQRNWTCRDKCK-----VWWKNE--SDE--DGSWWDG--RVLSVKPKSSEFPD-SP 1597
+D A QRNW D+ + WW S E + D + SV+ ++E SP
Sbjct: 1060 YDEARQRNWQPSDRFRSIIDDAWWFGTVLSQEPYQPQYPDSHFQCYSVRWDNTEIEKLSP 1119
Query: 1598 WERYTVQYKTEPTE------THLHSPWE--LFD-SDTQWEQPRIDDDNRNKLLSAFAKLE 1648
W+ + +P E + E L+ D +W Q R D+ +++S ++
Sbjct: 1120 WDMEPIPDNVDPPEELGASISVTSDELEKLLYKPQDGEWGQ-RSRDEECERIISG---ID 1175
Query: 1649 QSANRVQDQYGVQKLKQVSQKTNFTNRFPVPLSLDVIQSRLENNYYRGLEAVKHDIAVML 1708
Q N + + + P L I+ RL + +YR L A+ ++ +
Sbjct: 1176 QLLN-LDIAAAFAGPVDLCTYPKYCTVVAYPTDLYTIRMRLVHRFYRRLSALIWEVRYIE 1234
Query: 1709 SNAESYFGRNTDLSTKIKRLSDLVTRTLSS 1738
NA ++ + ++ K+++D + + + +
Sbjct: 1235 HNARTFNEPESVIARSAKKITDQLLKFIKN 1264
Score = 116 (45.9 bits), Expect = 1.8e-52, Sum P(5) = 1.8e-52
Identities = 32/94 (34%), Positives = 49/94 (52%)
Query: 40 PAELDVDVDLREVYFLIMHFLSTGPCHRTYGQFWNELLEHQLLPRRYHAWYSRSGLPSGD 99
PA V + E+YFLI +LS GPC R EL ++QLLP+R W G+
Sbjct: 6 PARRPVPLIESELYFLIARYLSAGPCRRAAQVLVQELEQYQLLPKRLD-W-------EGN 57
Query: 100 ENDDGMSFPLSYNKLVERYPHIEKDHLVKLLKQL 133
E++ SY +LV H+ DHL+++ +++
Sbjct: 58 EHNR------SYEELVLSNKHVAPDHLLQICQRI 85
Score = 66 (28.3 bits), Expect = 3.3e-23, Sum P(6) = 3.3e-23
Identities = 31/141 (21%), Positives = 49/141 (34%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMET----AYCLASCRGHEGD-- 287
+ I + H + V F +G ++GS D +IW E + L GD
Sbjct: 359 EKIAELESHTDKVDSIQFCNNGDRFLSGSRDGTARIWRFEQLEWKSILLDMAARISGDTS 418
Query: 288 ----------ITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSP 337
+T D +++VW G + L GH V + P
Sbjct: 419 AEEERFMKPKVTMIAWNQDDSTVVTAVNDHVLKVWSSYTGQLLHNLLGHADEVFVLETHP 478
Query: 338 RPGSVYQLLSSSDDGTCRIWD 358
+ +LS+ DG+ IWD
Sbjct: 479 FDSRI--MLSAGHDGSIFIWD 497
Score = 65 (27.9 bits), Expect = 4.2e-23, Sum P(6) = 4.2e-23
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWN 420
++C AF+ G TGS D L ++W+
Sbjct: 189 VYCVAFDRTGHRIFTGSDDCLVKIWS 214
Score = 55 (24.4 bits), Expect = 1.8e-52, Sum P(5) = 1.8e-52
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 1679 PLSLDVIQSRLE-NNYYRGLEAVKHDIAVMLSNAESYF-GRNTDLSTKIKRLSDLVTRTL 1736
P+ ++ LE NY +E K DI ++ SNA++Y + + + + RLS L +
Sbjct: 1358 PMDFGTVRETLEAGNYDSPVEFCK-DIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKM 1416
Query: 1737 SSL 1739
+
Sbjct: 1417 KKI 1419
Score = 54 (24.1 bits), Expect = 1.4e-28, Sum P(7) = 1.4e-28
Identities = 39/202 (19%), Positives = 82/202 (40%)
Query: 931 SGRSLLNEQRKHSKGKGISLDDSEDVTKLDTPESHVNAGIRRLVLKLPVRDSNKHELQER 990
+ +S+ + + KH++ + + + S + L PE +A + ++
Sbjct: 1955 TAKSIPSSEGKHARCE-VPEEQSACRSSLAEPEQQGSAENASQAANADLDFEGSSSFEQT 2013
Query: 991 TSDKCNQLVSVIGTSSEAHQEATEGNGNR--VSYVGNNCSSVDANCGLMERRGRGQFDKL 1048
S + Q+ SV + Q ++ G S+ ++ S+ + ++ ++ G+ +
Sbjct: 2014 KSIQKRQMDSVCIRAPSKTQNSSAGPSQEDPKSHTQDSDISLSSE-SVLAQKAIGE-NNF 2071
Query: 1049 EDYLNLSNGYKDGKIRWGGVRARSSKRLKIGEMMPLDANNGSGIHLDDDKEKESEVNGHV 1108
E+ LN Y G RW G R R+ + + P+ + + + + K V+
Sbjct: 2072 EEELN----Y--GLRRWNGRRLRTYGKAPLSRTAPVTPSLQAAAEV---RVKRRRVH--- 2119
Query: 1109 KPEKDGIDISCGEEITNCGDNT 1130
PE DG DI + CG +T
Sbjct: 2120 -PEVDGEDIPGQMGSSGCGPDT 2140
Score = 47 (21.6 bits), Expect = 1.2e-51, Sum P(5) = 1.2e-51
Identities = 11/18 (61%), Positives = 12/18 (66%)
Query: 1713 SYFGRNTDLSTKIKRLSD 1730
S G+NT LS K K LSD
Sbjct: 1792 SALGKNTHLSKKAKILSD 1809
Score = 46 (21.3 bits), Expect = 1.7e-28, Sum P(6) = 1.7e-28
Identities = 48/208 (23%), Positives = 84/208 (40%)
Query: 1170 ESKCVNTTDEDTTPYPNHLQNGTIQPSELKEILTPVSTKLRIRSKRILRDADVENQNNGC 1229
+S+ + +++ED+ + + +G PS + P+++ ++ + I +AD E G
Sbjct: 1743 KSRPIESSEEDSRCHES--DHG---PSSTVD---PLTSGQKLGADSISEEADSEP---GS 1791
Query: 1230 DAL-HGSSLDIKPNSLPEVLESD---GTNRTSSDRGADGSQRLNAQI---DSTSEHDPLG 1282
AL + L K L + + + G R G+ S+ L + S H P
Sbjct: 1792 SALGKNTHLSKKAKILSDSEDCEEKYGERRGPEVEGSPVSEALREAVIVPQCLSHHGPET 1851
Query: 1283 SHSHSHDPLGSHSHSH-SRKMFNVVYRRSKTNRDRTNSEGDGGGVGESTLNANNNNFHES 1341
+ SHS+ + + +R K +R R S ES L + +
Sbjct: 1852 DVDSDGSAVREKSHSNVNDSVSRENGQRKKVSRKRFCSSDS-----ESNLQVIQKSPIDQ 1906
Query: 1342 ATDGSRRTRSMGLKTT----TCDPDNVS 1365
T SR TRS G+ T T D ++VS
Sbjct: 1907 -TSPSRITRSAGMVTDKTKLTSDAEDVS 1933
Score = 43 (20.2 bits), Expect = 1.8e-52, Sum P(5) = 1.8e-52
Identities = 20/79 (25%), Positives = 37/79 (46%)
Query: 1341 SATDGSRRTRSMGLKTTTC-DPDNVSSNL--RLEQHNQPEDMYSGHNRSTSRCQLPHEEW 1397
+ +DG + + L T D SS L + Q Q +D+ G ++ + LP+EE
Sbjct: 627 ATSDGEVIEQVISLHTNDSGDASPESSVLDGMIRQLQQQQDLRLGVDQDVTANGLPNEEG 686
Query: 1398 ----GSSSKMTVGLRSTRN 1412
GS ++++ ++S N
Sbjct: 687 TPRRGSFRRLSLDIQSPPN 705
Score = 40 (19.1 bits), Expect = 5.0e-31, Sum P(4) = 5.0e-31
Identities = 13/55 (23%), Positives = 23/55 (41%)
Query: 704 EPYQTMYQQRRLGALGIEWRPSSLKLAVGPDFSLDQGYQLQPLADLDVMIDPLPE 758
EPYQ Y + W + ++ + P + ++P+ D +DP PE
Sbjct: 1091 EPYQPQYPDSHFQCYSVRWDNTEIE-KLSP-------WDMEPIPD---NVDP-PE 1133
Score = 40 (19.1 bits), Expect = 1.1e-28, Sum P(5) = 1.1e-28
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 1441 MLSTHEEGSRYIPQLGDEVVYLRQ 1464
+LS ++E I +E VYLR+
Sbjct: 2268 LLSVYKEDDALIHSENEEEVYLRR 2291
Score = 40 (19.1 bits), Expect = 1.1e-28, Sum P(5) = 1.1e-28
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 817 DGLRRSKRKKQKAEVEIMTSSGRRVKR 843
D + +RKK+K + +++ R R
Sbjct: 2159 DNTKAQRRKKRKGKTRVLSQESVRKDR 2185
Score = 39 (18.8 bits), Expect = 2.1e-50, Sum P(6) = 2.1e-50
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 979 VRDSNKHELQERT 991
+RDSN + L E+T
Sbjct: 568 IRDSNNYVLDEQT 580
Score = 39 (18.8 bits), Expect = 8.8e-28, Sum P(6) = 8.8e-28
Identities = 9/21 (42%), Positives = 10/21 (47%)
Query: 1336 NNFHESATDGSRRTRSMGLKT 1356
NNF E G RR L+T
Sbjct: 2069 NNFEEELNYGLRRWNGRRLRT 2089
Score = 38 (18.4 bits), Expect = 3.5e-29, Sum P(5) = 3.5e-29
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 808 DSEDGENPMDGLRRSKRKKQK 828
D + G+ + LRRS+R KQ+
Sbjct: 1422 DFKIGQKFKEKLRRSQRFKQR 1442
Score = 38 (18.4 bits), Expect = 1.4e-21, Sum P(4) = 1.4e-21
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 337 PRPGSVYQLLSSSDDGTCRIWDARYSQ 363
P+ + L+S S TCR A YS+
Sbjct: 782 PQKSNSMVLVSQSRQRTCRRKYANYSR 808
Score = 38 (18.4 bits), Expect = 2.0e-20, Sum P(6) = 2.0e-20
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 555 VLAAIMDCRICVWNAADGSLVH 576
+L DCR VW + + +H
Sbjct: 111 LLRTAKDCRHTVWKGSAFAALH 132
Score = 37 (18.1 bits), Expect = 1.4e-28, Sum P(7) = 1.4e-28
Identities = 15/62 (24%), Positives = 24/62 (38%)
Query: 1315 DRTNSEGDGGGVGESTLNANNNNFHESATDGSRRTRSMGLKTTTCDPDNVSSNLRLEQHN 1374
D + D G V ES ++ +N T RR + G KT ++V +
Sbjct: 2139 DTSPKSSDLGSVTESDVDCTDN------TKAQRRKKRKG-KTRVLSQESVRKDREPHTKT 2191
Query: 1375 QP 1376
+P
Sbjct: 2192 RP 2193
Score = 37 (18.1 bits), Expect = 4.2e-14, Sum P(4) = 4.2e-14
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 103 DGMSFPLSYNKLVERYPHIEKDHLVKLL 130
DG P + +LV + +HLV L
Sbjct: 596 DGNPHPTKFQRLVPGRENSADEHLVPQL 623
>UNIPROTKB|Q9NSI6 [details] [associations]
symbol:BRWD1 "Bromodomain and WD repeat-containing protein
1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0003674
"molecular_function" evidence=ND] [GO:0008360 "regulation of cell
shape" evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005737 GO:GO:0007010
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006357
GO:GO:0006351 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 EMBL:AJ238214 EMBL:AJ292465 EMBL:AJ292466
EMBL:AB080586 EMBL:AB080587 EMBL:AF064861 EMBL:AF129408
EMBL:BC064602 EMBL:AL163279 EMBL:AJ222636 EMBL:AK002177
IPI:IPI00250716 IPI:IPI00289944 IPI:IPI00746752
RefSeq:NP_001007247.1 RefSeq:NP_061836.2 RefSeq:NP_387505.1
UniGene:Hs.627139 UniGene:Hs.654740 PDB:3Q2E PDBsum:3Q2E
ProteinModelPortal:Q9NSI6 SMR:Q9NSI6 IntAct:Q9NSI6 STRING:Q9NSI6
DMDM:97535778 PaxDb:Q9NSI6 PRIDE:Q9NSI6 Ensembl:ENST00000333229
Ensembl:ENST00000341322 Ensembl:ENST00000342449
Ensembl:ENST00000380800 GeneID:54014 KEGG:hsa:54014 UCSC:uc002yxk.2
UCSC:uc021wjf.1 CTD:54014 GeneCards:GC21M040556 HGNC:HGNC:12760
HPA:HPA030945 neXtProt:NX_Q9NSI6 PharmGKB:PA134906879
HOVERGEN:HBG080933 InParanoid:Q9NSI6 KO:K11798 OMA:NDNGERS
OrthoDB:EOG470TGD PhylomeDB:Q9NSI6 ChiTaRS:BRWD1
EvolutionaryTrace:Q9NSI6 GenomeRNAi:54014 NextBio:56274
ArrayExpress:Q9NSI6 Bgee:Q9NSI6 CleanEx:HS_BRWD1
Genevestigator:Q9NSI6 GermOnline:ENSG00000185658 Uniprot:Q9NSI6
Length = 2320
Score = 336 (123.3 bits), Expect = 3.7e-52, Sum P(4) = 3.7e-52
Identities = 113/438 (25%), Positives = 190/438 (43%)
Query: 306 DCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFS 365
DC++++W +G +S LRGH+A ++ +A + + + S D R+W R +
Sbjct: 207 DCLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTMI---AAGSCDKIIRVWCLRTC--A 261
Query: 366 PRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTV-FVTGSSDTLA------RV 418
P + + ++ +P + G Q + + + A+GTV F ++L +
Sbjct: 262 PVAVLQGHTGSITSLQFSPMAK-GSQRYMV---STGADGTVCFWQWDLESLKFSPRPLKF 317
Query: 419 WNACKPNTDD--SDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTPKFKN 476
+P S + + +G + V + F G + + E T K +
Sbjct: 318 TEKPRPGVQMLCSSFSVGGMFLATGSTDHVIRMYFLGFEAPEKIA----ELESHTDKVDS 373
Query: 477 SWFCH--DNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVXXXXXXXXXXXXXXXX 534
FC+ D ++ SRDG+A IW R+ Q +
Sbjct: 374 IQFCNNGDRFLSGSRDGTARIW------------RFEQLEWRSILLDMATRISGDLSSEE 421
Query: 535 XILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFN 594
P+ V MI W+ ++ V+ A+ D + VWN+ G L+H+L GH + +VL+ HPF+
Sbjct: 422 ERFMKPK-VTMIAWNQNDSIVVTAVNDHVLKVWNSYTGQLLHNLMGHADEVFVLETHPFD 480
Query: 595 PRIAMSAGYDGKTIVWDIWEGIPIR-------------IYEISRFRDGASIILSDDVGQL 641
RI +SAG+DG +WDI +G ++ +++ +DG +D G L
Sbjct: 481 SRIMLSAGHDGSIFIWDITKGTKMKHYFNMIEGQGHGAVFDCKFSQDGQHFACTDSHGHL 540
Query: 642 YILNTGQGESQKDAKYDQFFLGDYRPLVQDTYGNVLDQETQLAPHRRNLQDP--LCDSAM 699
I G + + FF DYRPL++D+ VLD++TQ APH L P L D
Sbjct: 541 LIFGFGCSKPYEKIPDQMFFHTDYRPLIRDSNNYVLDEQTQQAPH---LMPPPFLVDVDG 597
Query: 700 IPYPEPYQTMYQQRRLGA 717
P+P YQ + R A
Sbjct: 598 NPHPTKYQRLVPGRENSA 615
Score = 336 (123.3 bits), Expect = 5.6e-51, Sum P(5) = 5.6e-51
Identities = 104/329 (31%), Positives = 158/329 (48%)
Query: 103 DGMSFPLSYNKLVERYPHIEKDHLVKLLKQLIINTSSPSRAMIGGDAP-NAADVPTLLGR 161
+G SY +LV H+ DHL+++ +++ P M+ + P + + V +LLG
Sbjct: 55 EGNEHNRSYEELVLSNKHVAPDHLLQICQRI-----GP---MLDKEIPPSISRVTSLLGA 106
Query: 162 GSFSLLSYDRDKGQNEIDHPPA----HM-RWPHMYADQVRGLGLREIGGGFTRHHRAPSI 216
G SLL +D ++ + A H R P M + L EI HR +
Sbjct: 107 GRQSLLRTAKDC-RHTVWKGSAFAALHRGRPPEMPVNYGSPPNLVEI-------HRGKQL 158
Query: 217 RA-ACYAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETA 275
+ ++ A P TM Q ++ +R+ GH +AVYC FDR+G + TGSDD LVKIWS
Sbjct: 159 TGCSTFSTAFPGTMYQHIKMHRRILGHLSAVYCVAFDRTGHRIFTGSDDCLVKIWSTHNG 218
Query: 276 YCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAF 335
L++ RGH +I+D D IIRVW L P++VL+GHT ++T++ F
Sbjct: 219 RLLSTLRGHSAEISDMAVNYENTMIAAGSCDKIIRVWCLRTCAPVAVLQGHTGSITSLQF 278
Query: 336 SPRP-GSVYQLLSSSDDGTCRIW--DARYSQFSPRI--YIPRPSDAVAGRNMAPSSSAGP 390
SP GS ++S+ DGT W D +FSPR + +P V
Sbjct: 279 SPMAKGSQRYMVSTGADGTVCFWQWDLESLKFSPRPLKFTEKPRPGV------------- 325
Query: 391 QSHQIFCCAFNANGTVFVTGSSDTLARVW 419
Q+ C +F+ G TGS+D + R++
Sbjct: 326 ---QMLCSSFSVGGMFLATGSTDHVIRMY 351
Score = 255 (94.8 bits), Expect = 3.7e-52, Sum P(4) = 3.7e-52
Identities = 125/515 (24%), Positives = 207/515 (40%)
Query: 1130 TDEVPLKNVKNLSGENNDVYSGDASCKEQQSGFSELNYYDESKCVNTTDEDTTPYPNHLQ 1189
+D ++ + +L +ND S ++S + +L + + D+DT P L
Sbjct: 629 SDGEVIEQIISLQTNDNDERSPESSILDGM--IRQLQQQQDQRM--GADQDTIP--RGLS 682
Query: 1190 NGTIQPSE-LKEILTPVSTKLRIRSKRILRDADVENQN-NGCDALHGSSLDIKPNS---- 1243
NG P + + + + I +R + V + N + + D++
Sbjct: 683 NGEETPRRGFRRLSLDIQSPPNIGLRRSGQVEGVRQMHQNAPRSQIATERDLQAWKRRVV 742
Query: 1244 LPEVLESDGTNRTSSD-RGADGSQRLNAQIDSTSEHDPLGSHSHSHDPLGSHSHSHS-RK 1301
+PEV G R D R G + N I SH L S S + R+
Sbjct: 743 VPEV--PLGIFRKLEDFRLEKGEEERNLYIIGRKRKTLQLSHKSDSVVLVSQSRQRTCRR 800
Query: 1302 MFNVVYRRSKTNRDRTNSEGDGGGVGESTLNANNNNFHESATDGSRRTR-SMGLKTTTCD 1360
+ RR+++ R+ ++ V T + S D R R S ++ D
Sbjct: 801 KYPNYGRRNRSWRELSSGNESSSSVRHETSCDQSEGSGSSEEDEWRSDRKSESYSESSSD 860
Query: 1361 PDNVSSNLRLEQ--HNQPEDMYSGHNRSTSRCQLPHEEWGSSSKMTVGLRSTR---NRRT 1415
+ S+ + + QP S R T C +E + + R R N+
Sbjct: 861 SSSRYSDWTADAGINLQPPLRTSCRRRITRFCSSSEDEISTENLSPPKRRRKRKKENKPK 920
Query: 1416 SYLFCDSSPID-RRKTH-QSLRKGSWLMLSTHEEGSRYIPQLGDEVVYLRQGHQEYIN-- 1471
+P + H W+ +T + S ++PQ+GDEV+Y RQGH+ YI
Sbjct: 921 KENLRRMTPAELANMEHLYEFHPPVWITDTTLRK-SPFVPQMGDEVIYFRQGHEAYIEAV 979
Query: 1472 -----YSGSREVGPWITVKGNIRAVEFCKVESLEYATASGSGDSCCKMTLKFIDP-TSSV 1525
Y + PW K ++R E K+ + Y G CC + L FIDP T +
Sbjct: 980 RRNNIYELNPNKEPWR--KMDLRDQELVKIVGIRYEV--GPPTLCC-LKLAFIDPATGKL 1034
Query: 1526 SNMTFRLTLPEVTGFPDFLVERTRFDAAIQRNWTCRDKCKVWWKNESDEDGSWWDGRVLS 1585
+ +F + ++ DFLV R +D A QRNW D+ + S D +WW G VLS
Sbjct: 1035 MDKSFSIRYHDMPDVIDFLVLRQFYDEARQRNWQSCDRFR------SIIDDAWWFGTVLS 1088
Query: 1586 VKPKSSEFPDSPWERYTVQYKTEPTETHLHSPWEL 1620
+P ++PDS ++ Y V++ + TE SPW++
Sbjct: 1089 QEPYQPQYPDSHFQCYIVRW--DNTEIEKLSPWDM 1121
Score = 126 (49.4 bits), Expect = 6.0e-37, Sum P(4) = 6.0e-37
Identities = 99/463 (21%), Positives = 178/463 (38%)
Query: 1309 RSKTNRDRTNSEGDGGGV-GESTLNANNNNFHESATDGSRR----TRSMGLKTTTCDPDN 1363
R +T+ D+ SEG G E + + ++ ES++D S R T G+ P
Sbjct: 826 RHETSCDQ--SEGSGSSEEDEWRSDRKSESYSESSSDSSSRYSDWTADAGINLQP--PLR 881
Query: 1364 VSSNLRLEQH-NQPEDMYSGHNRSTSRCQLPHEEWGSSSKMTVG-LRSTRNRRTSYLFCD 1421
S R+ + + ED S N S + + ++ K + + +L+
Sbjct: 882 TSCRRRITRFCSSSEDEISTENLSPPKRRRKRKKENKPKKENLRRMTPAELANMEHLYEF 941
Query: 1422 SSPIDRRKTHQSLRKGSWLMLSTHEEGSRYIPQLGDEVVYLRQGHQEYINYSGSREVGPW 1481
P+ T +LRK ++ E Y Q G E Y+ + I Y + PW
Sbjct: 942 HPPV--WITDTTLRKSPFVPQMGDEV--IYFRQ-GHEA-YIEAVRRNNI-YELNPNKEPW 994
Query: 1482 ITVKGNIRAVEFCKVESLEYATASGSGDSCCKMTLKFIDPTSSVSNMTFRLTLPEVTGFP 1541
K ++R E K+ + Y G CC T + + +F + ++
Sbjct: 995 R--KMDLRDQELVKIVGIRYEV--GPPTLCCLKLAFIDPATGKLMDKSFSIRYHDMPDVI 1050
Query: 1542 DFLVERTRFDAAIQRNWTCRDKCK-----VWWKNE--SDE-------DGSW------WDG 1581
DFLV R +D A QRNW D+ + WW S E D + WD
Sbjct: 1051 DFLVLRQFYDEARQRNWQSCDRFRSIIDDAWWFGTVLSQEPYQPQYPDSHFQCYIVRWDN 1110
Query: 1582 -RVLSVKPKSSE-FPDS--PWERY--TVQYKTEPTETHLHSPWELFDSDTQWEQPRIDDD 1635
+ + P E PD+ P E ++ T+ E L+ P +W Q + D+
Sbjct: 1111 TEIEKLSPWDMEPIPDNVDPPEELGASISVTTDELEKLLYKP-----QAGEWGQ-KSRDE 1164
Query: 1636 NRNKLLSAFAKLEQSANRVQDQYGVQKLKQVSQKTNFTNRFPVPLSLDVIQSRLENNYYR 1695
++++S ++Q N + + + P L I+ RL N +YR
Sbjct: 1165 ECDRIISG---IDQLLN-LDIAAAFAGPVDLCTYPKYCTVVAYPTDLYTIRMRLVNRFYR 1220
Query: 1696 GLEAVKHDIAVMLSNAESYFGRNTDLSTKIKRLSDLVTRTLSS 1738
L A+ ++ + NA ++ + ++ K+++D + + + +
Sbjct: 1221 RLSALVWEVRYIEHNARTFNEPESVIARSAKKITDQLLKFIKN 1263
Score = 111 (44.1 bits), Expect = 3.7e-52, Sum P(4) = 3.7e-52
Identities = 29/83 (34%), Positives = 45/83 (54%)
Query: 51 EVYFLIMHFLSTGPCHRTYGQFWNELLEHQLLPRRYHAWYSRSGLPSGDENDDGMSFPLS 110
E+YFLI +LS GPC R EL ++QLLP+R W G+E++ S
Sbjct: 17 ELYFLIARYLSAGPCRRAAQVLVQELEQYQLLPKRLD-W-------EGNEHNR------S 62
Query: 111 YNKLVERYPHIEKDHLVKLLKQL 133
Y +LV H+ DHL+++ +++
Sbjct: 63 YEELVLSNKHVAPDHLLQICQRI 85
Score = 74 (31.1 bits), Expect = 9.3e-31, Sum P(5) = 9.3e-31
Identities = 49/180 (27%), Positives = 62/180 (34%)
Query: 1265 SQRLNAQIDSTSEHDPLGS-HSHSHDPLGSHSHSHSRKMFNVVYRRSKTNRDRTNSEGDG 1323
SQ LN DS SE D L S H H H + RK +V + SE D
Sbjct: 2011 SQALNG--DSDSE-DMLNSEHKHRHTNIHKIDAPSKRKSSSVTSSGEDSKSHIPGSETDR 2067
Query: 1324 GGVGESTLNAN---NNNFHESATDGSRRTRSMGLKTTTCDPDNVSSNLRLEQHNQPEDMY 1380
ESTL NNF G RR L+T P + + + H+ E
Sbjct: 2068 TFSSESTLAQKATAENNFEVELNYGLRRWNGRRLRTYGKAPFSKTKVI----HDSQETAE 2123
Query: 1381 SGHNRSTSRCQLPH---EEWGSSSKMTVGLRSTRNRRTSYLFCDSSPIDRRKTHQSLRKG 1437
R S +L + E +SK S + S D D KT + KG
Sbjct: 2124 KEVKRKRSHPELENVKISETTGNSKFRPDTSSKSSDLGSVTESDIDCTDNTKTKRRKTKG 2183
Score = 67 (28.6 bits), Expect = 2.8e-23, Sum P(5) = 2.8e-23
Identities = 31/141 (21%), Positives = 49/141 (34%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMET----AYCLASCRGHEGD-- 287
+ I + H + V F +G ++GS D +IW E + L GD
Sbjct: 359 EKIAELESHTDKVDSIQFCNNGDRFLSGSRDGTARIWRFEQLEWRSILLDMATRISGDLS 418
Query: 288 ----------ITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSP 337
+T D +++VW G + L GH V + P
Sbjct: 419 SEEERFMKPKVTMIAWNQNDSIVVTAVNDHVLKVWNSYTGQLLHNLMGHADEVFVLETHP 478
Query: 338 RPGSVYQLLSSSDDGTCRIWD 358
+ +LS+ DG+ IWD
Sbjct: 479 FDSRI--MLSAGHDGSIFIWD 497
Score = 65 (27.9 bits), Expect = 4.5e-23, Sum P(5) = 4.5e-23
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWN 420
++C AF+ G TGS D L ++W+
Sbjct: 189 VYCVAFDRTGHRIFTGSDDCLVKIWS 214
Score = 57 (25.1 bits), Expect = 3.7e-52, Sum P(4) = 3.7e-52
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 1679 PLSLDVIQSRLE-NNYYRGLEAVKHDIAVMLSNAESYF-GRNTDLSTKIKRLSDLVTRTL 1736
P+ ++ L+ NY LE K DI ++ SNA++Y + + + + RLS L +
Sbjct: 1357 PMDFGTVRETLDAGNYDSPLEFCK-DIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKM 1415
Query: 1737 SSLKAPQFHDVGQ 1749
+ + F +GQ
Sbjct: 1416 KKISS-DFK-IGQ 1426
Score = 46 (21.3 bits), Expect = 2.0e-28, Sum P(5) = 2.0e-28
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 1492 EFCKVESLEYATASGSGDSCCKMTLKFIDPTSSVSNM 1528
+F K+ES E + S D C T P++SV +
Sbjct: 1749 KFLKIESSEEDSKSHDSDHACNRTA---GPSTSVQKL 1782
Score = 44 (20.5 bits), Expect = 7.8e-29, Sum P(4) = 7.8e-29
Identities = 69/345 (20%), Positives = 131/345 (37%)
Query: 963 ESHVNAGIRRLVLKLPV--RDSNKHELQERTSDKCNQLVSVIGTSSEAHQEATEGNGNRV 1020
+SH A + LK+ DS H+ + SV +E+ E + R
Sbjct: 1739 KSHTPAPSKTKFLKIESSEEDSKSHDSDHACNRTAGPSTSVQKLKAESISEEADSEPGRS 1798
Query: 1021 SYVGNNCSSVDANCGLMERRGRGQFDKLEDYLNLSNGYKDGKIRWGGVRARSSKRLKIGE 1080
G ++ N ++ + D ED + +DGK + S L
Sbjct: 1799 G--GRKYNTFHKNASFFKKT-KILSDS-EDSESEEQDREDGKCHKMEMNPISGN-LNCDP 1853
Query: 1081 --MMPLDANNGSGIHLDDDKEKESEVNGHVKPEKDGIDISCGEEITN---CGDNTDEVPL 1135
M +++G LD D +K + N +K + D +I+ C ++D L
Sbjct: 1854 IAMSQCSSDHGCETDLDSDDDKIEKPNNFMK-DSASQDNGLSRKISRKRVCSSDSDS-SL 1911
Query: 1136 KNVKNLSGENNDVYSGDASCKEQQSGFSEL--NYYDES-KCVNTTDEDTTPYPNHLQNGT 1192
+ VK S + C + +L + D S + V+T ++ P HL T
Sbjct: 1912 QVVKKSSKARTGLLRITRRCAATAANKIKLMSDVEDVSLENVHTRSKNGRKKPLHLACTT 1971
Query: 1193 IQPSELKEILTPVSTKLRIRSKRILRDADVENQNN-GCDALHGSSLDIKPNSLPEVLESD 1251
+ +L + S + S++ + + ++ G + +L+ +S ++L S+
Sbjct: 1972 AK-KKLSDC--EGSVHCEVPSEQYACEGKPPDPDSEGSTKVLSQALNGDSDS-EDMLNSE 2027
Query: 1252 GTNRTSSDRGADG-SQRLNAQIDSTSEHDPLGSHSHSHDPLGSHS 1295
+R ++ D S+R ++ + S+ G S SH P GS +
Sbjct: 2028 HKHRHTNIHKIDAPSKRKSSSVTSS------GEDSKSHIP-GSET 2065
Score = 42 (19.8 bits), Expect = 9.3e-31, Sum P(5) = 9.3e-31
Identities = 13/54 (24%), Positives = 23/54 (42%)
Query: 940 RKHSKGKGISLDDSEDVTKLDTPESHVNAGIRRLVLKLPVRDSNKHELQERTSD 993
RK S+ K + DS+ ++ S G+ R+ + +NK +L D
Sbjct: 1895 RKISR-KRVCSSDSDSSLQVVKKSSKARTGLLRITRRCAATAANKIKLMSDVED 1947
Score = 42 (19.8 bits), Expect = 3.6e-30, Sum P(4) = 3.6e-30
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 927 ESEESGRSLLNEQRKHSKGKGISLDDSEDVTKLDTPESHVNAGIRRLVLKLPVRDSNKHE 986
+SE SG S +E R K + S S+ ++ + +AGI L+ P+R S +
Sbjct: 833 QSEGSGSSEEDEWRSDRKSESYSESSSDSSSRYS--DWTADAGIN---LQPPLRTSCRRR 887
Query: 987 L 987
+
Sbjct: 888 I 888
Score = 42 (19.8 bits), Expect = 2.0e-28, Sum P(5) = 2.0e-28
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 1303 FNVVYRRSKTNRDRTNSEGD 1322
FN RRS+ + R N +GD
Sbjct: 1428 FNEKLRRSQRFKQRQNCKGD 1447
Score = 40 (19.1 bits), Expect = 2.7e-15, Sum P(3) = 2.7e-15
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 103 DGMSFPLSYNKLVERYPHIEKDHLVKLL 130
DG P Y +LV + +HL+ L
Sbjct: 596 DGNPHPTKYQRLVPGRENSADEHLIPQL 623
Score = 39 (18.8 bits), Expect = 5.6e-51, Sum P(5) = 5.6e-51
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 979 VRDSNKHELQERT 991
+RDSN + L E+T
Sbjct: 568 IRDSNNYVLDEQT 580
Score = 38 (18.4 bits), Expect = 2.3e-20, Sum P(5) = 2.3e-20
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 555 VLAAIMDCRICVWNAADGSLVH 576
+L DCR VW + + +H
Sbjct: 111 LLRTAKDCRHTVWKGSAFAALH 132
Score = 37 (18.1 bits), Expect = 9.3e-31, Sum P(5) = 9.3e-31
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 808 DSEDGENPMDGLRRSKRKKQK 828
D + G+ + LRRS+R KQ+
Sbjct: 1421 DFKIGQKFNEKLRRSQRFKQR 1441
>UNIPROTKB|Q8WWQ0 [details] [associations]
symbol:PHIP "PH-interacting protein" species:9606 "Homo
sapiens" [GO:0006606 "protein import into nucleus" evidence=IEA]
[GO:0010800 "positive regulation of peptidyl-threonine
phosphorylation" evidence=IEA] [GO:0033138 "positive regulation of
peptidyl-serine phosphorylation" evidence=IEA] [GO:0040008
"regulation of growth" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005158 "insulin receptor binding" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008286 "insulin
receptor signaling pathway" evidence=NAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0001932 "regulation of
protein phosphorylation" evidence=ISS] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISS]
[GO:0043568 "positive regulation of insulin-like growth factor
receptor signaling pathway" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0007010 "cytoskeleton
organization" evidence=IMP] [GO:0022604 "regulation of cell
morphogenesis" evidence=IMP] [GO:0045840 "positive regulation of
mitosis" evidence=ISS] [GO:0070577 "histone acetyl-lysine binding"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005634 GO:GO:0008286
GO:GO:0045893 GO:GO:0007010 GO:GO:0043066 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 EMBL:CH471051
eggNOG:COG2319 GO:GO:0045944 GO:GO:0010800 GO:GO:0006606
GO:GO:0040008 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0045840
GO:GO:0001932 GO:GO:0033138 GO:GO:0043568 GO:GO:0022604
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 HOVERGEN:HBG108248 GO:GO:0005158 EMBL:AL450327
EMBL:AJ303102 EMBL:AL356776 EMBL:BC008909 EMBL:BC021905
EMBL:BC081569 EMBL:BC137488 EMBL:AK057039 EMBL:AK075124
EMBL:AL161957 EMBL:AF310250 IPI:IPI00291916 RefSeq:NP_060404.3
UniGene:Hs.511817 UniGene:Hs.606356 PDB:3MB3 PDBsum:3MB3
ProteinModelPortal:Q8WWQ0 SMR:Q8WWQ0 IntAct:Q8WWQ0
MINT:MINT-1422606 STRING:Q8WWQ0 PhosphoSite:Q8WWQ0 DMDM:308153472
PaxDb:Q8WWQ0 PRIDE:Q8WWQ0 Ensembl:ENST00000275034 GeneID:55023
KEGG:hsa:55023 UCSC:uc011dyp.2 CTD:55023 GeneCards:GC06M079644
H-InvDB:HIX0032894 HGNC:HGNC:15673 MIM:612870 neXtProt:NX_Q8WWQ0
PharmGKB:PA33265 InParanoid:Q8WWQ0 KO:K11797 OMA:PGTIQVN
OrthoDB:EOG41ZF90 ChiTaRS:PHIP EvolutionaryTrace:Q8WWQ0
GenomeRNAi:55023 NextBio:58406 ArrayExpress:Q8WWQ0 Bgee:Q8WWQ0
CleanEx:HS_PHIP Genevestigator:Q8WWQ0 Uniprot:Q8WWQ0
Length = 1821
Score = 351 (128.6 bits), Expect = 8.9e-51, Sum P(5) = 8.9e-51
Identities = 131/484 (27%), Positives = 207/484 (42%)
Query: 306 DCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFS 365
DC++++W DG ++ LRGH A ++ +A + + + S D R+W R +
Sbjct: 204 DCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTMI---AAGSCDKMIRVWCLRTC--A 258
Query: 366 PRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTV-FVTGSSDTL------ARV 418
P + S ++ +P S + + + A+GT+ F + TL A+
Sbjct: 259 PLAVLQGHSASITSLQFSPLCSGSKR----YLSSTGADGTICFWLWDAGTLKINPRPAKF 314
Query: 419 WNACKPNTDD--SDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLAD--SSKEDSTPKF 474
+P S + + +G + + V F G + S + + K DS +F
Sbjct: 315 TERPRPGVQMICSSFSAGGMFLATGSTDHIIRVYFFGSGQPEKISELEFHTDKVDSI-QF 373
Query: 475 KNSWFCHDNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVXXXXXXXXXXXXXXXX 534
N+ + V+ SRDG+A IW + R W + +
Sbjct: 374 SNT---SNRFVSGSRDGTARIWQFKRRE-------WKS---ILLDMATRPAGQNLQGIED 420
Query: 535 XILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFN 594
I T V M+ W + V+ A+ + + VWN+ G L+H L GH + +VL+ HPF+
Sbjct: 421 KI--TKMKVTMVAWDRHDNTVITAVNNMTLKVWNSYTGQLIHVLMGHEDEVFVLEPHPFD 478
Query: 595 PRIAMSAGYDGKTIVWDIWEGIPIR-------------IYEISRFRDGASIILSDDVGQL 641
PR+ SAG+DG IVWD+ G+ IR +++ DG +D G L
Sbjct: 479 PRVLFSAGHDGNVIVWDLARGVKIRSYFNMIEGQGHGAVFDCKCSPDGQHFACTDSHGHL 538
Query: 642 YILNTGQGESQKDAKYDQ-FFLGDYRPLVQDTYGNVLDQETQLAPHRRNLQDP--LCDSA 698
I G S+ D DQ FF DYRPL++D VLD++TQ APH L P L D
Sbjct: 539 LIFGFGSS-SKYDKIADQMFFHSDYRPLIRDANNFVLDEQTQQAPH---LMPPPFLVDVD 594
Query: 699 MIPYPEPYQTMYQQRRLGALGIEWRPSSLKLAVGPDFSLDQGYQLQPLADLDVMIDPLPE 758
P+P YQ + R + P + G + L Q Q ++ LD MI L +
Sbjct: 595 GNPHPSRYQRLVPGRE-NCREEQLIPQMGVTSSGLNQVLSQQAN-QEISPLDSMIQRLQQ 652
Query: 759 FIDV 762
D+
Sbjct: 653 EQDL 656
Score = 333 (122.3 bits), Expect = 7.6e-49, Sum P(5) = 7.6e-49
Identities = 109/335 (32%), Positives = 160/335 (47%)
Query: 104 GMSFPLSYNKLVERYPHIEKDHLVKLLKQLIINTSSPSRAMIGGDAPNAAD-VPTLLGRG 162
G P +Y LV+ Y H+ DHL+++ +L P ++ + P + V TLLG G
Sbjct: 53 GKEHPRTYQNLVKYYRHLAPDHLLQICHRL-----GP---LLEQEIPQSVPGVQTLLGAG 104
Query: 163 SFSLLSYDRD------KGQN----EIDHPP-AHMRW--PHMYADQVRGLGLREIGGGFTR 209
SLL ++ KG PP + + + P AD L R++ G +
Sbjct: 105 RQSLLRTNKSCKHVVWKGSALAALHCGRPPESPVNYGSPPSIADT---LFSRKLNGKYRL 161
Query: 210 HHRAPSIRAACYAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKI 269
P+ A Y Q M+ KR+ GH ++VYC FDR+GR + TGSDD LVKI
Sbjct: 162 ERLVPT---AVY---------QHMKMHKRILGHLSSVYCVTFDRTGRRIFTGSDDCLVKI 209
Query: 270 WSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAA 329
W+ + LA+ RGH +I+D D +IRVW L P++VL+GH+A+
Sbjct: 210 WATDDGRLLATLRGHAAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPLAVLQGHSAS 269
Query: 330 VTAIAFSPR-PGSVYQLLSSSDDGT-CR-IWDARYSQFSPRI--YIPRPSDAVAGRNMAP 384
+T++ FSP GS L S+ DGT C +WDA + +PR + RP V
Sbjct: 270 ITSLQFSPLCSGSKRYLSSTGADGTICFWLWDAGTLKINPRPAKFTERPRPGV------- 322
Query: 385 SSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVW 419
Q+ C +F+A G TGS+D + RV+
Sbjct: 323 ---------QMICSSFSAGGMFLATGSTDHIIRVY 348
Score = 229 (85.7 bits), Expect = 8.9e-51, Sum P(5) = 8.9e-51
Identities = 59/178 (33%), Positives = 90/178 (50%)
Query: 1451 YIPQLGDEVVYLRQGHQEYIN-------YSGSREVGPWITVKGNIRAVEFCKVESLEYAT 1503
++PQ+GDEV Y RQGH+ Y+ YS + + PW K +R E K+ ++Y
Sbjct: 956 FVPQMGDEVYYFRQGHEAYVEMARKNKIYSINPKKQPWH--KMELREQELMKIVGIKYEV 1013
Query: 1504 ASGSGDSCCKMTLKFIDP-TSSVSNMTFRLTLPEVTGFPDFLVERTRFDAAIQRNWTCRD 1562
G CC + L F+DP T ++ +F + ++ DFLV R +FD A R W D
Sbjct: 1014 --GLPTLCC-LKLAFLDPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFDDAKYRRWNIGD 1070
Query: 1563 KCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPTETHLHSPWEL 1620
+ + S D +WW G + S +P E+PDS ++ Y V + TE SPW++
Sbjct: 1071 RFR------SVIDDAWWFGTIESQEPLQLEYPDSLFQCYNVCWDNGDTEKM--SPWDM 1120
Score = 116 (45.9 bits), Expect = 8.9e-51, Sum P(5) = 8.9e-51
Identities = 32/87 (36%), Positives = 46/87 (52%)
Query: 48 DLR-EVYFLIMHFLSTGPCHRTYGQFWNELLEHQLLPRRYHAWYSRSGLPSGDENDDGMS 106
+LR E+YFLI FL GPC + E+ E +LLPRR W +G E+
Sbjct: 10 ELRSELYFLIARFLEDGPCQQAAQVLIREVAEKELLPRRTD-W-------TGKEH----- 56
Query: 107 FPLSYNKLVERYPHIEKDHLVKLLKQL 133
P +Y LV+ Y H+ DHL+++ +L
Sbjct: 57 -PRTYQNLVKYYRHLAPDHLLQICHRL 82
Score = 100 (40.3 bits), Expect = 6.5e-37, Sum P(4) = 6.5e-37
Identities = 60/305 (19%), Positives = 113/305 (37%)
Query: 1451 YIPQLGDEVVYLRQGHQEYINYSGSREVGPWITVKGNIRAVEFCKVESLEYATASGSGDS 1510
Y Q G E Y+ + I YS + + PW K +R E K+ ++Y G
Sbjct: 966 YFRQ-GHEA-YVEMARKNKI-YSINPKKQPWH--KMELREQELMKIVGIKYEV--GLPTL 1018
Query: 1511 CCKMTLKFIDPTSSVSNMTFRLTLPEVTGFPDFLVERTRFDAAIQRNWTCRDKCK----- 1565
CC T ++ +F + ++ DFLV R +FD A R W D+ +
Sbjct: 1019 CCLKLAFLDPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFDDAKYRRWNIGDRFRSVIDD 1078
Query: 1566 VWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPTETHLHSPWELFDSDT 1625
WW + + L + + W+ + K P + L +F +
Sbjct: 1079 AWWFGTIESQ----EPLQLEYPDSLFQCYNVCWDNGDTE-KMSPWDMELIPNNAVFPEEL 1133
Query: 1626 QWEQPRIDDDNRNKLLSAFA------KLEQSANRVQDQYGVQKLKQVSQKTNFT-----N 1674
P D + R+ + ++ R+ G+ +L + + F
Sbjct: 1134 GTSVPLTDGECRSLIYKPLDGEWGTNPRDEECERIVA--GINQLMTLDIASAFVAPVDLQ 1191
Query: 1675 RFPV-------PLSLDVIQSRLENNYYRGLEAVKHDIAVMLSNAESYFGRNTDLSTKIKR 1727
+P+ P L I+ RLEN +YR + ++ ++ + N ++ + + K
Sbjct: 1192 AYPMYCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEPGSPIVKSAKF 1251
Query: 1728 LSDLV 1732
++DL+
Sbjct: 1252 VTDLL 1256
Score = 71 (30.1 bits), Expect = 9.1e-22, Sum P(5) = 9.1e-22
Identities = 22/81 (27%), Positives = 35/81 (43%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V + + R + DC + +W DG L+ +L GH + V+ N IA AG
Sbjct: 186 VYCVTFDRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTMIA--AG 243
Query: 603 YDGKTI-VWDIWEGIPIRIYE 622
K I VW + P+ + +
Sbjct: 244 SCDKMIRVWCLRTCAPLAVLQ 264
Score = 60 (26.2 bits), Expect = 1.1e-20, Sum P(5) = 1.1e-20
Identities = 14/57 (24%), Positives = 27/57 (47%)
Query: 234 QNIKRVRGH--RNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDI 288
QN++ + + V +DR VIT ++ +K+W+ T + GHE ++
Sbjct: 413 QNLQGIEDKITKMKVTMVAWDRHDNTVITAVNNMTLKVWNSYTGQLIHVLMGHEDEV 469
Score = 54 (24.1 bits), Expect = 8.9e-51, Sum P(5) = 8.9e-51
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 1679 PLSLDVIQSRLE-NNYYRGLEAVKHDIAVMLSNAESYF-GRNTDLSTKIKRLS----DLV 1732
P+ ++ LE NY +E K D+ ++ SN+++Y + + + + RLS + +
Sbjct: 1360 PMDFATVRETLEAGNYESPMELCK-DVRLIFSNSKAYTPSKRSRIYSMSLRLSAFFEEHI 1418
Query: 1733 TRTLSSLK-APQFH 1745
+ LS K A +FH
Sbjct: 1419 SSVLSDYKSALRFH 1432
Score = 47 (21.6 bits), Expect = 0.00037, Sum P(4) = 0.00037
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 1578 W-WDGRVLSVKPKSSEFPDSP 1597
W WD L + P+ ++F + P
Sbjct: 298 WLWDAGTLKINPRPAKFTERP 318
Score = 44 (20.5 bits), Expect = 4.5e-19, Sum P(5) = 4.5e-19
Identities = 9/40 (22%), Positives = 17/40 (42%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSME 273
+ I + H + V F + ++GS D +IW +
Sbjct: 356 EKISELEFHTDKVDSIQFSNTSNRFVSGSRDGTARIWQFK 395
Score = 41 (19.5 bits), Expect = 1.9e-49, Sum P(5) = 1.9e-49
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 1719 TDLSTKIKRLSDLVTRTLSSL 1739
TDLST +RL + R +SSL
Sbjct: 1204 TDLSTIKQRLENRFYRRVSSL 1224
Score = 39 (18.8 bits), Expect = 8.9e-51, Sum P(5) = 8.9e-51
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 1056 NGYKDGKI--RWGGVRARSSKRLKIGEM 1081
N KDG I + + R KRL +GE+
Sbjct: 903 NEEKDGPISPKKKKPKERKQKRLAVGEL 930
Score = 39 (18.8 bits), Expect = 1.2e-30, Sum P(4) = 1.2e-30
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 812 GENPMDGLRRSKRKKQKAEVEIMTSSGRRVKRR 844
G P ++R +K K VE+ T+SG + ++
Sbjct: 1628 GGQPSKLVKRGPGRKPK--VEVNTNSGEIIHKK 1658
Score = 39 (18.8 bits), Expect = 1.2e-30, Sum P(4) = 1.2e-30
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 1200 EILTPVSTKLRIRSKRILRDADVENQNNGCDALHGS 1235
++L P S K+ RS R D ++ + + L GS
Sbjct: 1728 DLLVPASVKVLRRSNRKKIDDPIDEEEE-FEELKGS 1762
Score = 38 (18.4 bits), Expect = 1.5e-30, Sum P(4) = 1.5e-30
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 820 RRSKRKKQKAEVEIMTSSGRRVKRRIL 846
RR KR + + SS R K+RIL
Sbjct: 1440 RRKKRNRSSSVSSSAASSPER-KKRIL 1465
>UNIPROTKB|F1MTQ0 [details] [associations]
symbol:BRWD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005737 GO:GO:0007010
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 GO:GO:0006357 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 OMA:NDNGERS
GeneTree:ENSGT00700000104382 EMBL:DAAA02003179 IPI:IPI00685238
Ensembl:ENSBTAT00000018087 Uniprot:F1MTQ0
Length = 2322
Score = 335 (123.0 bits), Expect = 1.2e-50, Sum P(5) = 1.2e-50
Identities = 113/438 (25%), Positives = 190/438 (43%)
Query: 306 DCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFS 365
DC++++W +G +S LRGH+A ++ +A + + + S D R+W R +
Sbjct: 207 DCLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTMI---AAGSCDKIIRVWCLRTC--A 261
Query: 366 PRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTV-FVTGSSDTLA------RV 418
P + + ++ +P + G Q + + + A+GTV F ++L +
Sbjct: 262 PVAVLQGHTGSITSLQFSPMAK-GSQRYMV---STGADGTVCFWQWDLESLKFSPRPLKF 317
Query: 419 WNACKPNTDD--SDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTPKFKN 476
+P S + + +G + V + F G + + E T K +
Sbjct: 318 TEKPRPGVQMLCSSFSVGGMFLATGSTDHVIRMYFLGFEAPEKIA----ELESHTDKVDS 373
Query: 477 SWFCH--DNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVXXXXXXXXXXXXXXXX 534
FC+ D ++ SRDG+A IW R+ Q +
Sbjct: 374 IQFCNNGDRFLSGSRDGTARIW------------RFEQLEWRSILLDMATRISGDLSLEE 421
Query: 535 XILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFN 594
P+ V MI W+ ++ V+ A+ D + VWN+ G L+H+L GH + +VL+ HPF+
Sbjct: 422 ERFMKPK-VTMIAWNQNDSIVVTAVNDHVLKVWNSYTGQLLHNLLGHADEVFVLETHPFD 480
Query: 595 PRIAMSAGYDGKTIVWDIWEGIPIR-------------IYEISRFRDGASIILSDDVGQL 641
RI +SAG+DG +WDI +G ++ +++ +DG +D G L
Sbjct: 481 SRIMLSAGHDGSIFIWDITKGTKMKHYFNMIEGQGHGAVFDCKFSQDGQHFACTDSHGHL 540
Query: 642 YILNTGQGESQKDAKYDQFFLGDYRPLVQDTYGNVLDQETQLAPHRRNLQDP--LCDSAM 699
I G + + FF DYRPL++D+ VLD++TQ APH L P L D
Sbjct: 541 LIFGFGCSKPYEKIPDQMFFHTDYRPLIRDSNNYVLDEQTQQAPH---LMPPPFLVDVDG 597
Query: 700 IPYPEPYQTMYQQRRLGA 717
P+P YQ + R A
Sbjct: 598 NPHPTKYQRLVPGRENSA 615
Score = 331 (121.6 bits), Expect = 2.3e-49, Sum P(6) = 2.3e-49
Identities = 103/329 (31%), Positives = 157/329 (47%)
Query: 103 DGMSFPLSYNKLVERYPHIEKDHLVKLLKQLIINTSSPSRAMIGGDAP-NAADVPTLLGR 161
+G SY +LV H+ DHL+++ +++ P M+ + P + + V +LLG
Sbjct: 55 EGNEHNRSYEELVLSNKHVAPDHLLQICQRI-----GP---MLDKEIPPSISRVTSLLGA 106
Query: 162 GSFSLLSYDRDKGQNEIDHPPA----HM-RWPHMYADQVRGLGLREIGGGFTRHHRAPSI 216
G SLL +D ++ + A H R P M + L EI HR +
Sbjct: 107 GRQSLLRTAKDC-RHTVWKGSAFAALHRGRPPEMPVNYGSPPNLVEI-------HRGKQL 158
Query: 217 RA-ACYAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETA 275
+ ++ A P M Q ++ +R+ GH +AVYC FDR+G + TGSDD LVKIWS
Sbjct: 159 TGCSTFSTAFPGAMYQHIKMHRRILGHLSAVYCVAFDRTGHRIFTGSDDCLVKIWSTHNG 218
Query: 276 YCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAF 335
L++ RGH +I+D D IIRVW L P++VL+GHT ++T++ F
Sbjct: 219 RLLSTLRGHSAEISDMAVNYENTMIAAGSCDKIIRVWCLRTCAPVAVLQGHTGSITSLQF 278
Query: 336 SPRP-GSVYQLLSSSDDGTCRIW--DARYSQFSPRI--YIPRPSDAVAGRNMAPSSSAGP 390
SP GS ++S+ DGT W D +FSPR + +P V
Sbjct: 279 SPMAKGSQRYMVSTGADGTVCFWQWDLESLKFSPRPLKFTEKPRPGV------------- 325
Query: 391 QSHQIFCCAFNANGTVFVTGSSDTLARVW 419
Q+ C +F+ G TGS+D + R++
Sbjct: 326 ---QMLCSSFSVGGMFLATGSTDHVIRMY 351
Score = 247 (92.0 bits), Expect = 1.2e-50, Sum P(5) = 1.2e-50
Identities = 64/190 (33%), Positives = 98/190 (51%)
Query: 1439 WLMLSTHEEGSRYIPQLGDEVVYLRQGHQEYIN-------YSGSREVGPWITVKGNIRAV 1491
W+ +T + S ++PQ+GDEV+Y RQGH+ YI Y + PW K ++R
Sbjct: 946 WITDTTLRK-SPFVPQMGDEVIYFRQGHEAYIEAVRRNNIYELNPNKEPWR--KMDLRDQ 1002
Query: 1492 EFCKVESLEYATASGSGDSCCKMTLKFIDP-TSSVSNMTFRLTLPEVTGFPDFLVERTRF 1550
E K+ + Y G CC + L FIDP T + + +F + ++ DFLV R +
Sbjct: 1003 ELVKIVGIRYEV--GPPTLCC-LKLAFIDPATGKLMDKSFSIRYHDMPDVIDFLVLRQFY 1059
Query: 1551 DAAIQRNWTCRDKCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPT 1610
D A QRNW D+ + S D +WW G VL +P ++PDS ++ Y V++ + T
Sbjct: 1060 DEARQRNWQSCDRFR------SIIDDAWWFGTVLRQEPYQPQYPDSHFQCYIVRW--DNT 1111
Query: 1611 ETHLHSPWEL 1620
E SPW++
Sbjct: 1112 EIEKLSPWDM 1121
Score = 116 (45.9 bits), Expect = 1.2e-50, Sum P(5) = 1.2e-50
Identities = 32/94 (34%), Positives = 49/94 (52%)
Query: 40 PAELDVDVDLREVYFLIMHFLSTGPCHRTYGQFWNELLEHQLLPRRYHAWYSRSGLPSGD 99
PA V + E+YFLI +LS GPC R EL ++QLLP+R W G+
Sbjct: 6 PARRPVPLIESELYFLIARYLSAGPCRRAAQVLVQELEQYQLLPKRLD-W-------EGN 57
Query: 100 ENDDGMSFPLSYNKLVERYPHIEKDHLVKLLKQL 133
E++ SY +LV H+ DHL+++ +++
Sbjct: 58 EHNR------SYEELVLSNKHVAPDHLLQICQRI 85
Score = 66 (28.3 bits), Expect = 3.0e-22, Sum P(6) = 3.0e-22
Identities = 31/141 (21%), Positives = 49/141 (34%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMET----AYCLASCRGHEGD-- 287
+ I + H + V F +G ++GS D +IW E + L GD
Sbjct: 359 EKIAELESHTDKVDSIQFCNNGDRFLSGSRDGTARIWRFEQLEWRSILLDMATRISGDLS 418
Query: 288 ----------ITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSP 337
+T D +++VW G + L GH V + P
Sbjct: 419 LEEERFMKPKVTMIAWNQNDSIVVTAVNDHVLKVWNSYTGQLLHNLLGHADEVFVLETHP 478
Query: 338 RPGSVYQLLSSSDDGTCRIWD 358
+ +LS+ DG+ IWD
Sbjct: 479 FDSRI--MLSAGHDGSIFIWD 497
Score = 65 (27.9 bits), Expect = 3.7e-22, Sum P(6) = 3.7e-22
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWN 420
++C AF+ G TGS D L ++W+
Sbjct: 189 VYCVAFDRTGHRIFTGSDDCLVKIWS 214
Score = 60 (26.2 bits), Expect = 1.2e-50, Sum P(5) = 1.2e-50
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 1679 PLSLDVIQSRLE-NNYYRGLEAVKHDIAVMLSNAESYF-GRNTDLSTKIKRLSDLVTRTL 1736
P+ ++ LE NY LE K DI ++ SNA++Y + + + + RLS L +
Sbjct: 1358 PMDFGTVRETLEAGNYDSPLEFCK-DIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKM 1416
Query: 1737 SSLKAPQFHDVGQ 1749
+ + F +GQ
Sbjct: 1417 KKISS-DFK-IGQ 1427
Score = 58 (25.5 bits), Expect = 1.8e-21, Sum P(6) = 1.8e-21
Identities = 12/62 (19%), Positives = 31/62 (50%)
Query: 227 STMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEG 286
+T + +++ R + V ++++ V+T +D ++K+W+ T L + GH
Sbjct: 410 ATRISGDLSLEEERFMKPKVTMIAWNQNDSIVVTAVNDHVLKVWNSYTGQLLHNLLGHAD 469
Query: 287 DI 288
++
Sbjct: 470 EV 471
Score = 50 (22.7 bits), Expect = 4.0e-29, Sum P(5) = 4.0e-29
Identities = 34/156 (21%), Positives = 61/156 (39%)
Query: 1230 DALHGSSLDIKPNSLPEVLESDGTNRT--SSDRGADGSQRLNAQIDSTSEHDPLGSHSHS 1287
D+ + ++K L LE+ + T SS G D S + ++ + S +E D +
Sbjct: 2118 DSQEAAETEVKRKRLQTELENVKASETTGSSKCGPDTSPKSDSDLGSATESDADCTDDSK 2177
Query: 1288 HDPLGSHSHSHSRKMFNVVYRRSKTNRDRT--NSEGDGGGVGESTLNAN---NNNFHESA 1342
+ + + +V R + RT +++ D + TL A A
Sbjct: 2178 TKKRKTKGKAKVVRKESVPRDREPNTKMRTCVHNQKDAVPMPSETLKAKMVPEKVPRRCA 2237
Query: 1343 TDGSRRTRSMG-LKTTTCDPDNV---SSNLRLEQHN 1374
T + + + M LK T P+NV S+ +L N
Sbjct: 2238 TVAANKIKIMSNLKETISGPENVWIRKSSRKLPHRN 2273
Score = 49 (22.3 bits), Expect = 3.1e-29, Sum P(4) = 3.1e-29
Identities = 28/120 (23%), Positives = 55/120 (45%)
Query: 1304 NVVYRRSKTNRDRTNSEGDGGGVGESTLNANNNNFHESATDGSRRTRSMGLKTTTCDPDN 1363
N R +K R ++ ++ VG S + ++ SA+ + + S G+ T+ D+
Sbjct: 1452 NKSIRNTKQKRLKSQTKVISEFVG-SPIQPTSSRATYSASHKTTASVSSGV-TSGDSSDS 1509
Query: 1364 VSSNLRLEQHNQPEDMYSGHNRSTSRCQLPHEEWGSSSKMTVGLRSTRNRRTSYLFCDSS 1423
+S+ R+ + N+P + +G S S + + G+SS + S+ + S DSS
Sbjct: 1510 AASSERMRR-NRPVTLTNGSTLSESEME---DSLGTSSSSSAS-NSSEESKESPRARDSS 1564
Score = 48 (22.0 bits), Expect = 6.3e-29, Sum P(5) = 6.3e-29
Identities = 30/116 (25%), Positives = 44/116 (37%)
Query: 1249 ESDGTNRTSSDRGADGSQRLNAQI---DSTSEHDPLGSHSHSHDPLGSHSHSHSRKMFNV 1305
E G D ++GS + +Q DS SE H + H S + S+ +
Sbjct: 1990 EQSGCEGQPLDADSEGSAKSISQSLNEDSDSEGVLNSGHKNRHTRSLKTSVASSKTKNAL 2049
Query: 1306 VYRRSKTNRDRTNSEGDGGGV--GESTL--NAN-NNNFHESATDGSRRTRSMGLKT 1356
+ + ++ G+ G ESTL A NNF E G RR L+T
Sbjct: 2050 IVSLEEDSKSHI-PRGEIGRKCSSESTLVHKATAENNFEEELNYGLRRWNGRRLRT 2104
Score = 47 (21.6 bits), Expect = 4.9e-29, Sum P(4) = 4.9e-29
Identities = 22/73 (30%), Positives = 31/73 (42%)
Query: 1250 SDG-TNRTSSDRGADGSQRLNAQIDSTSEHDPLGSHSHSHDPLGSHSHSHSRKMFNVVYR 1308
S G T+ SSD A S+R+ T + S S D LG+ S S S + +
Sbjct: 1498 SSGVTSGDSSDSAAS-SERMRRNRPVTLTNGSTLSESEMEDSLGTSSSS-SASNSSEESK 1555
Query: 1309 RSKTNRDRTNSEG 1321
S RD ++ G
Sbjct: 1556 ESPRARDSSSRSG 1568
Score = 46 (21.3 bits), Expect = 4.0e-29, Sum P(5) = 4.0e-29
Identities = 25/82 (30%), Positives = 35/82 (42%)
Query: 934 SLLNEQRKHSKGKGISLDDSEDVTKLDTPES-HVNAGIRRLVL-KLPVRDSNKHELQERT 991
SL N + + K + L DS++ L T ES V AG R VL K +NK +L
Sbjct: 1591 SLENGCGRKATRKRVYLSDSDN-NSLATGESVKVRAGNNRKVLRKCAAVAANKIKLMSDV 1649
Query: 992 SDKCNQLVSVIGTSSEAHQEAT 1013
+ SV H+ A+
Sbjct: 1650 EENSTS-ESVCSGRKLPHRNAS 1670
Score = 45 (20.9 bits), Expect = 1.3e-28, Sum P(5) = 1.3e-28
Identities = 32/173 (18%), Positives = 72/173 (41%)
Query: 1193 IQPSELKEILTPVSTKLRIRSKRILRDADVENQNNGCDALHGSSLDIKPNSLPEVLESDG 1252
++ ELK+ L+P+S L ++ + D E++++ L + + N + +
Sbjct: 1690 LEEEELKDQLSPLSNSLAAQNTE---NGDSESESD----LRVARKNWHANGYKSQIPA-- 1740
Query: 1253 TNRTSSDRGADGSQRLNAQIDSTSEHDPLGSHSHSHDPLGSHSHSHSRKMFNVVYRRSKT 1312
T++T + A + + DS + H S S L + S S + N R+ +
Sbjct: 1741 TSKTKFLKIASSEEDSKSH-DSDNGHSRTAGPSTSLLKLKAESISEEEEKANSETRKYSS 1799
Query: 1313 NRDRTNSEGDGGGVGESTLNANNNNFHESATDGSRRTRSMGLKTTT----CDP 1361
+ T + + + ++ L +++ + DG R M + ++ C+P
Sbjct: 1800 RKYSTGRK-NAPFLKKAKLFSDSEDSESDKEDGQDRCHKMEMNPSSGNVECEP 1851
Score = 44 (20.5 bits), Expect = 1.6e-28, Sum P(5) = 1.6e-28
Identities = 34/163 (20%), Positives = 55/163 (33%)
Query: 1232 LHGSSLDIKPNS-LPEVLESDGTNRTSSDRGADGSQRLNAQIDSTSEHDPLGSHSHSH-D 1289
LH S D S L E D + S+ A ++ N DS SE D + + H +
Sbjct: 1677 LHNSEDDQSLKSELEEEELKDQLSPLSNSLAAQNTE--NG--DSESESDLRVARKNWHAN 1732
Query: 1290 PLGSHSHSHSRKMFNVVYRRSKTNRDRTNSEGDGGGVGEST--LNANNNNFHESATDGSR 1347
S + S+ F + + ++ + G G ST L + E +
Sbjct: 1733 GYKSQIPATSKTKFLKIASSEEDSKSHDSDNGHSRTAGPSTSLLKLKAESISEEEEKANS 1792
Query: 1348 RTRSMGLKTTTCDPDNVSSNLRLEQHNQPEDMYSGHNRSTSRC 1390
TR + + N + + + ED S RC
Sbjct: 1793 ETRKYSSRKYSTGRKNAPFLKKAKLFSDSEDSESDKEDGQDRC 1835
Score = 41 (19.5 bits), Expect = 1.4e-13, Sum P(4) = 1.4e-13
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 103 DGMSFPLSYNKLVERYPHIEKDHLVKLL 130
DG P Y +LV + +HLV L
Sbjct: 596 DGNPHPTKYQRLVPGRENSADEHLVPQL 623
Score = 39 (18.8 bits), Expect = 2.3e-49, Sum P(6) = 2.3e-49
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 979 VRDSNKHELQERT 991
+RDSN + L E+T
Sbjct: 568 IRDSNNYVLDEQT 580
Score = 38 (18.4 bits), Expect = 1.7e-19, Sum P(6) = 1.7e-19
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 555 VLAAIMDCRICVWNAADGSLVH 576
+L DCR VW + + +H
Sbjct: 111 LLRTAKDCRHTVWKGSAFAALH 132
Score = 37 (18.1 bits), Expect = 1.2e-50, Sum P(5) = 1.2e-50
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 808 DSEDGENPMDGLRRSKRKKQ 827
D EN RR KRKK+
Sbjct: 897 DEMSAENLSPPKRRRKRKKE 916
Score = 37 (18.1 bits), Expect = 2.3e-49, Sum P(6) = 2.3e-49
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 1384 NRSTSRCQLPHEEWGSSSKMTVGLRSTRNRRTSY 1417
++S C EEW S + S+ + + Y
Sbjct: 832 DQSEGSCSSEEEEWKSDRRSESDSESSSDSSSRY 865
Score = 37 (18.1 bits), Expect = 4.0e-29, Sum P(5) = 4.0e-29
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 808 DSEDGENPMDGLRRSKRKKQKAEVEIMTSSGRRVK 842
D + G+ + LRRS+R K++ + + + ++
Sbjct: 1422 DFKIGQKFSEKLRRSQRFKRRQNCNRVNQANKSIR 1456
Score = 37 (18.1 bits), Expect = 5.2e-28, Sum P(4) = 5.2e-28
Identities = 18/61 (29%), Positives = 25/61 (40%)
Query: 1210 RIRSKR--ILRDADVENQNNGCDALHGSSLDIKPNSLPEVLESDGTNRTSSDRGADGSQR 1267
R+R R L + +++ D+L SS NS E ES +SS G S
Sbjct: 1515 RMRRNRPVTLTNGSTLSESEMEDSLGTSSSSSASNSSEESKESPRARDSSSRSGLARSSN 1574
Query: 1268 L 1268
L
Sbjct: 1575 L 1575
>MGI|MGI:1932404 [details] [associations]
symbol:Phip "pleckstrin homology domain interacting protein"
species:10090 "Mus musculus" [GO:0001932 "regulation of protein
phosphorylation" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006606
"protein import into nucleus" evidence=IMP] [GO:0007010
"cytoskeleton organization" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=IGI;IMP] [GO:0008286
"insulin receptor signaling pathway" evidence=IDA] [GO:0010800
"positive regulation of peptidyl-threonine phosphorylation"
evidence=IDA] [GO:0022604 "regulation of cell morphogenesis"
evidence=ISO] [GO:0033138 "positive regulation of peptidyl-serine
phosphorylation" evidence=IDA] [GO:0040008 "regulation of growth"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IDA] [GO:0043568 "positive regulation of
insulin-like growth factor receptor signaling pathway"
evidence=IDA] [GO:0045840 "positive regulation of mitosis"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 MGI:MGI:1932404 GO:GO:0005634 GO:GO:0008286
GO:GO:0007010 GO:GO:0043066 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319 GO:GO:0045944
GO:GO:0010800 GO:GO:0006606 GO:GO:0040008 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0045840 GO:GO:0033138 GO:GO:0043568
GO:GO:0022604 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0070577 InterPro:IPR018359 HOGENOM:HOG000095265 HSSP:P16649
HOVERGEN:HBG108248 OrthoDB:EOG41ZF90 EMBL:AJ303103 EMBL:AB049460
EMBL:BC049950 EMBL:AK162189 EMBL:AF310251 IPI:IPI00311490
UniGene:Mm.221688 ProteinModelPortal:Q8VDD9 SMR:Q8VDD9
IntAct:Q8VDD9 STRING:Q8VDD9 PhosphoSite:Q8VDD9 PaxDb:Q8VDD9
PRIDE:Q8VDD9 UCSC:uc009qvv.1 InParanoid:Q8VDD9 CleanEx:MM_PHIP
Genevestigator:Q8VDD9 Uniprot:Q8VDD9
Length = 1821
Score = 349 (127.9 bits), Expect = 1.2e-50, Sum P(4) = 1.2e-50
Identities = 131/488 (26%), Positives = 213/488 (43%)
Query: 306 DCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFS 365
DC++++W DG ++ LRGH A ++ +A + + + S D R+W R +
Sbjct: 204 DCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTMI---AAGSCDKMIRVWCLRTC--A 258
Query: 366 PRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTV-FVTGSSDTLARVWNACKP 424
P + S ++ +P S + + + A+GT+ F + TL ++ N +P
Sbjct: 259 PLAVLQGHSASITSLQFSPLCSGSKR----YLSSTGADGTICFWLWDAGTL-KI-NP-RP 311
Query: 425 NTDDSDQPNHEIDVL------------SGHENDVNYVQFSGCAVASRFSLAD--SSKEDS 470
T +++P + ++ +G + + V F G + S + + K DS
Sbjct: 312 -TKFTERPRPGVQMICSSFSAGGMFLATGSTDHIIRVYFFGSGQPEKISELEFHTDKVDS 370
Query: 471 TPKFKNSWFCHDNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVXXXXXXXXXXXX 530
+F N+ + V+ SRDG+A IW + R W + +
Sbjct: 371 I-QFSNT---SNRFVSGSRDGTARIWQFKRRE-------WKS---ILLDMATRPAGQNLQ 416
Query: 531 XXXXXILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDV 590
I T V M+ W + V+ A+ + + VWN+ G L+H L GH + +VL+
Sbjct: 417 GIEDKI--TKMKVTMVAWDRHDNTVITAVNNMTLKVWNSYTGQLIHVLMGHEDEVFVLEP 474
Query: 591 HPFNPRIAMSAGYDGKTIVWDIWEGIPIR-------------IYEISRFRDGASIILSDD 637
HPF+PR+ SAG+DG IVWD+ G+ +R +++ DG +D
Sbjct: 475 HPFDPRVLFSAGHDGNVIVWDLARGVKVRSYFNMIEGQGHGAVFDCKCSPDGQHFACTDS 534
Query: 638 VGQLYILNTGQGESQKDAKYDQ-FFLGDYRPLVQDTYGNVLDQETQLAPHRRNLQDP--L 694
G L I G S+ D DQ FF DYRPL++D VLD++TQ APH L P L
Sbjct: 535 HGHLLIFGFGSS-SKYDKIADQMFFHSDYRPLIRDANNFVLDEQTQQAPH---LMPPPFL 590
Query: 695 CDSAMIPYPEPYQTMYQQRRLGALGIEWRPSSLKLAVGPDFSLDQGYQLQPLADLDVMID 754
D P+P YQ + R + P + G + L Q Q ++ LD MI
Sbjct: 591 VDVDGNPHPSRYQRLVPGRE-NCREEQLIPQMGVTSSGLNQVLSQQAN-QDISPLDSMIQ 648
Query: 755 PLPEFIDV 762
L + D+
Sbjct: 649 RLQQEQDL 656
Score = 333 (122.3 bits), Expect = 6.1e-49, Sum P(4) = 6.1e-49
Identities = 109/335 (32%), Positives = 160/335 (47%)
Query: 104 GMSFPLSYNKLVERYPHIEKDHLVKLLKQLIINTSSPSRAMIGGDAPNAAD-VPTLLGRG 162
G P +Y LV+ Y H+ DHL+++ +L P ++ + P + V TLLG G
Sbjct: 53 GKEHPRTYQNLVKYYRHLAPDHLLQICHRL-----GP---LLEQEIPQSVPGVQTLLGAG 104
Query: 163 SFSLLSYDRD------KGQN----EIDHPP-AHMRW--PHMYADQVRGLGLREIGGGFTR 209
SLL ++ KG PP + + + P AD L R++ G +
Sbjct: 105 RQSLLRTNKSCKHVVWKGSALAALHCGRPPESPVNYGSPPSIADT---LFSRKLNGKYRL 161
Query: 210 HHRAPSIRAACYAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKI 269
P+ A Y Q M+ KR+ GH ++VYC FDR+GR + TGSDD LVKI
Sbjct: 162 ERLVPT---AVY---------QHMKMHKRILGHLSSVYCVTFDRTGRRIFTGSDDCLVKI 209
Query: 270 WSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAA 329
W+ + LA+ RGH +I+D D +IRVW L P++VL+GH+A+
Sbjct: 210 WATDDGRLLATLRGHAAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPLAVLQGHSAS 269
Query: 330 VTAIAFSPR-PGSVYQLLSSSDDGT-CR-IWDARYSQFSPRI--YIPRPSDAVAGRNMAP 384
+T++ FSP GS L S+ DGT C +WDA + +PR + RP V
Sbjct: 270 ITSLQFSPLCSGSKRYLSSTGADGTICFWLWDAGTLKINPRPTKFTERPRPGV------- 322
Query: 385 SSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVW 419
Q+ C +F+A G TGS+D + RV+
Sbjct: 323 ---------QMICSSFSAGGMFLATGSTDHIIRVY 348
Score = 234 (87.4 bits), Expect = 1.2e-50, Sum P(4) = 1.2e-50
Identities = 86/325 (26%), Positives = 138/325 (42%)
Query: 1313 NRDRTNSEGDGGGVGESTLNANNNNFHESATDGSRRTRSMGLKTTTCDPD-NVSSNLRLE 1371
N ++ EG+ V T +H +DGS S T D N+ ++
Sbjct: 814 NGTSSSDEGEVLAVSGGTSEEEERAWH---SDGSSSDYSSDYSDWTADAGINLQPPKKVP 870
Query: 1372 QHN--QPEDMYSGHNRSTSRCQLPH--EEWGSSSKMTVGLRSTRNRRTSYLFCDSSPIDR 1427
+H +PE S ++ Q H +E +++ G S + ++ +
Sbjct: 871 KHKTKKPESSSDEEEESENQKQ-KHIKKERKKANEEKDGPTSPKKKKPKERKQKRLAVGE 929
Query: 1428 RKTHQSLRKGSWL----MLSTHEEGSRYIPQLGDEVVYLRQGHQEYIN-------YSGSR 1476
T L WL + T ++PQ+GDEV Y RQGH+ Y+ YS +
Sbjct: 930 L-TENGLTLEEWLPSAWITDTLPRRCPFVPQMGDEVYYFRQGHEAYVEMARKNKIYSINP 988
Query: 1477 EVGPWITVKGNIRAVEFCKVESLEYATASGSGDSCCKMTLKFIDP-TSSVSNMTFRLTLP 1535
+ PW K +R E K+ ++Y G CC + L F+DP T ++ +F +
Sbjct: 989 KKQPWH--KMELREQELMKIVGIKYEV--GLPTLCC-LKLAFLDPDTGKLTGGSFTMKYH 1043
Query: 1536 EVTGFPDFLVERTRFDAAIQRNWTCRDKCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPD 1595
++ DFLV R +FD A R W D+ + S D +WW G + S +P E+PD
Sbjct: 1044 DMPDVIDFLVLRQQFDDAKYRPWNIGDRFR------SVIDDAWWFGTIESQEPLQPEYPD 1097
Query: 1596 SPWERYTVQYKTEPTETHLHSPWEL 1620
S ++ Y V + TE SPW++
Sbjct: 1098 SLFQCYNVCWDNGDTEKM--SPWDM 1120
Score = 116 (45.9 bits), Expect = 1.2e-50, Sum P(4) = 1.2e-50
Identities = 32/87 (36%), Positives = 46/87 (52%)
Query: 48 DLR-EVYFLIMHFLSTGPCHRTYGQFWNELLEHQLLPRRYHAWYSRSGLPSGDENDDGMS 106
+LR E+YFLI FL GPC + E+ E +LLPRR W +G E+
Sbjct: 10 ELRSELYFLIARFLEDGPCQQAAQVLIREVAEKELLPRRTD-W-------TGKEH----- 56
Query: 107 FPLSYNKLVERYPHIEKDHLVKLLKQL 133
P +Y LV+ Y H+ DHL+++ +L
Sbjct: 57 -PRTYQNLVKYYRHLAPDHLLQICHRL 82
Score = 93 (37.8 bits), Expect = 2.7e-36, Sum P(4) = 2.7e-36
Identities = 64/308 (20%), Positives = 115/308 (37%)
Query: 1451 YIPQLGDEVVYLRQGHQEYINYSGSREVGPWITVKGNIRAVEFCKVESLEYATASGSGDS 1510
Y Q G E Y+ + I YS + + PW K +R E K+ ++Y G
Sbjct: 966 YFRQ-GHEA-YVEMARKNKI-YSINPKKQPWH--KMELREQELMKIVGIKYEV--GLPTL 1018
Query: 1511 CCKMTLKFIDPTSSVSNMTFRLTLPEVTGFPDFLVERTRFDAAIQRNWTCRDKCK----- 1565
CC T ++ +F + ++ DFLV R +FD A R W D+ +
Sbjct: 1019 CCLKLAFLDPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFDDAKYRPWNIGDRFRSVIDD 1078
Query: 1566 VWWKN--ESDEDGSWWDGRVLSVKPKSS-EFPDSPWERYTVQYKTEPTETHLHSPWELFD 1622
WW ES E + P S + + W+ + K P + L +F
Sbjct: 1079 AWWFGTIESQEP-------LQPEYPDSLFQCYNVCWDNGDTE-KMSPWDMELIPNNAVFP 1130
Query: 1623 SDTQWEQPRIDDDNRNKLLSAFA------KLEQSANRVQDQYGVQKLKQVSQKTNFT--- 1673
+ P D + R+ + ++ R+ G+ +L + + F
Sbjct: 1131 EELGTSVPLTDVECRSLIYKPLDGEWGANPRDEECERIVG--GINQLMTLDIASAFVAPV 1188
Query: 1674 --NRFPV-------PLSLDVIQSRLENNYYRGLEAVKHDIAVMLSNAESYFGRNTDLSTK 1724
+P+ P L I+ RLEN +YR ++ ++ + N ++ + +
Sbjct: 1189 DLQAYPMYCTVVAYPTDLSTIKQRLENRFYRRFSSLMWEVRYIEHNTRTFNEPGSPIVKS 1248
Query: 1725 IKRLSDLV 1732
K ++DL+
Sbjct: 1249 AKFVTDLL 1256
Score = 71 (30.1 bits), Expect = 1.1e-21, Sum P(4) = 1.1e-21
Identities = 22/81 (27%), Positives = 35/81 (43%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V + + R + DC + +W DG L+ +L GH + V+ N IA AG
Sbjct: 186 VYCVTFDRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTMIA--AG 243
Query: 603 YDGKTI-VWDIWEGIPIRIYE 622
K I VW + P+ + +
Sbjct: 244 SCDKMIRVWCLRTCAPLAVLQ 264
Score = 60 (26.2 bits), Expect = 1.5e-20, Sum P(4) = 1.5e-20
Identities = 14/57 (24%), Positives = 27/57 (47%)
Query: 234 QNIKRVRGH--RNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDI 288
QN++ + + V +DR VIT ++ +K+W+ T + GHE ++
Sbjct: 413 QNLQGIEDKITKMKVTMVAWDRHDNTVITAVNNMTLKVWNSYTGQLIHVLMGHEDEV 469
Score = 44 (20.5 bits), Expect = 6.2e-19, Sum P(4) = 6.2e-19
Identities = 9/40 (22%), Positives = 17/40 (42%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSME 273
+ I + H + V F + ++GS D +IW +
Sbjct: 356 EKISELEFHTDKVDSIQFSNTSNRFVSGSRDGTARIWQFK 395
Score = 42 (19.8 bits), Expect = 2.7e-36, Sum P(4) = 2.7e-36
Identities = 6/18 (33%), Positives = 13/18 (72%)
Query: 1095 DDDKEKESEVNGHVKPEK 1112
D+++E E++ H+K E+
Sbjct: 882 DEEEESENQKQKHIKKER 899
Score = 40 (19.1 bits), Expect = 1.2e-50, Sum P(4) = 1.2e-50
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 1719 TDLSTKIKRLSDLVTRTLSSL 1739
TDLST +RL + R SSL
Sbjct: 1204 TDLSTIKQRLENRFYRRFSSL 1224
Score = 40 (19.1 bits), Expect = 1.2e-30, Sum P(4) = 1.2e-30
Identities = 14/52 (26%), Positives = 19/52 (36%)
Query: 734 DFSLDQGYQLQPLADLDVMIDPLPEFIDVMDWEPENEVQSDDNDSEYNVAEE 785
D++ D G LQP + PE + E EN+ Q EE
Sbjct: 854 DWTADAGINLQPPKKVPKHKTKKPESSSDEEEESENQKQKHIKKERKKANEE 905
Score = 39 (18.8 bits), Expect = 1.6e-30, Sum P(4) = 1.6e-30
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 812 GENPMDGLRRSKRKKQKAEVEIMTSSG 838
G P ++R +K K VE+ TSSG
Sbjct: 1628 GGQPSKLVKRGPGRKPK--VEVNTSSG 1652
>ZFIN|ZDB-GENE-050208-261 [details] [associations]
symbol:phip "pleckstrin homology domain interacting
protein" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017956 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 SMART:SM00384 ZFIN:ZDB-GENE-050208-261
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:CR759802 EMBL:CR735144 IPI:IPI00634562
Ensembl:ENSDART00000138106 Bgee:E9QJ97 Uniprot:E9QJ97
Length = 1805
Score = 322 (118.4 bits), Expect = 2.3e-50, Sum P(5) = 2.3e-50
Identities = 116/435 (26%), Positives = 190/435 (43%)
Query: 306 DCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFS 365
DC++++W DG ++ LRGH A ++ +A + ++ L + S D R+W + +
Sbjct: 204 DCLVKIWATDDGHLLATLRGHAAEISDMAVNYE-NTL--LAAGSCDKMIRVWCLQTC--A 258
Query: 366 PRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTV-FVTGSSDTL------ARV 418
P + + ++ +P S + F + A+GT+ F + TL ++
Sbjct: 259 PLAVLEGHAASITSLQFSPLCSGNKR----FLSSTGADGTICFWQWDARTLKFGQRPSKF 314
Query: 419 WNACKPNTDD--SDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTPKFKN 476
+P S + + +G + + V + G + S E T K +
Sbjct: 315 IERPRPGVQMICSSFSAGGMFLATGSTDHIIRVYYFGGGQPEKIS----ELESHTDKVDS 370
Query: 477 SWFCH--DNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVXXXXXXXXXXXXXXXX 534
F H D V+ SRDG+A IW + + W ++ L +
Sbjct: 371 IQFSHSGDRFVSGSRDGTARIWQLQQQD-------W-RSILLDMATKLPGKYNPPPLEDK 422
Query: 535 XILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFN 594
T V M+ W ++ V+ A + + VWN+ G+L+H L GH + +VL+ HPF+
Sbjct: 423 V---TKLKVTMVAWDCNDNTVITAANNLTLKVWNSYTGNLIHVLMGHEDEVFVLEPHPFD 479
Query: 595 PRIAMSAGYDGKTIVWDIWEGIPIR-------------IYEISRFRDGASIILSDDVGQL 641
R+ SAG+DG IVWD+ G+ IR +++ DG +D G L
Sbjct: 480 SRVLFSAGHDGNAIVWDLARGVKIRSYFNMIEGQGHGAVFDCKCSPDGQHFACTDSHGHL 539
Query: 642 YILNTGQGESQKDAKYDQ-FFLGDYRPLVQDTYGNVLDQETQLAPHRRNLQDP--LCDSA 698
I G S+ D DQ FF DYRPL++D + VLD++TQ APH L P L D
Sbjct: 540 LIFGFGSS-SRYDKIADQMFFHTDYRPLIRDAHNFVLDEQTQQAPH---LMPPPFLVDVD 595
Query: 699 MIPYPEPYQTMYQQR 713
P+P +Q + R
Sbjct: 596 GNPHPPRFQRLVPGR 610
Score = 316 (116.3 bits), Expect = 1.0e-49, Sum P(5) = 1.0e-49
Identities = 75/199 (37%), Positives = 106/199 (53%)
Query: 226 PSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHE 285
P+ + Q M+ KR+ GH ++VYC FDR+GR + TGSDD LVKIW+ + + LA+ RGH
Sbjct: 166 PTAVYQHMKMHKRILGHLSSVYCVTFDRTGRRIFTGSDDCLVKIWATDDGHLLATLRGHA 225
Query: 286 GDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQL 345
+I+D D +IRVW L P++VL GH A++T++ FSP +
Sbjct: 226 AEISDMAVNYENTLLAAGSCDKMIRVWCLQTCAPLAVLEGHAASITSLQFSPLCSGNKRF 285
Query: 346 LSSSD-DGTCRIW--DARYSQFS--PRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAF 400
LSS+ DGT W DAR +F P +I RP V Q+ C +F
Sbjct: 286 LSSTGADGTICFWQWDARTLKFGQRPSKFIERPRPGV----------------QMICSSF 329
Query: 401 NANGTVFVTGSSDTLARVW 419
+A G TGS+D + RV+
Sbjct: 330 SAGGMFLATGSTDHIIRVY 348
Score = 232 (86.7 bits), Expect = 2.3e-50, Sum P(5) = 2.3e-50
Identities = 62/202 (30%), Positives = 99/202 (49%)
Query: 1431 HQSLRKGSWL----MLSTHEEGSRYIPQLGDEVVYLRQGHQEYINYSGSREV-------G 1479
+Q L WL + T + PQ+GDEV Y RQGH+ Y+ + ++
Sbjct: 918 NQGLTLEEWLPSNWITDTMPRRCPFTPQMGDEVYYFRQGHEAYVEMAKKNKIFSINPKKQ 977
Query: 1480 PWITVKGNIRAVEFCKVESLEYATASGSGDSCCKMTLKFIDPTSS-VSNMTFRLTLPEVT 1538
PW ++ +R E K+ ++Y G CC + L F+DP S ++ +F + ++
Sbjct: 978 PWHKLE--LREQELLKIVGIKYEV--GLPTLCC-LKLAFLDPDSGKLTGGSFSIKYHDMP 1032
Query: 1539 GFPDFLVERTRFDAAIQRNWTCRDKCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPW 1598
DFLV R +FD A QRNW D+ + + D +WW G + S +P +E+PDS +
Sbjct: 1033 DVIDFLVLRQQFDNARQRNWMIGDRFR------AVIDDAWWFGTIESQEPYQAEYPDSLF 1086
Query: 1599 ERYTVQYKTEPTETHLHSPWEL 1620
+ Y V + TE SPW++
Sbjct: 1087 QCYNVCWDNGDTEKM--SPWDM 1106
Score = 109 (43.4 bits), Expect = 2.3e-50, Sum P(5) = 2.3e-50
Identities = 29/83 (34%), Positives = 43/83 (51%)
Query: 51 EVYFLIMHFLSTGPCHRTYGQFWNELLEHQLLPRRYHAWYSRSGLPSGDENDDGMSFPLS 110
E+YFLI FL GPC E+ + +LLP+R W +G E+ P S
Sbjct: 14 ELYFLIARFLEAGPCQDAAETLIREVQQKELLPKRID-W-------TGKEH------PGS 59
Query: 111 YNKLVERYPHIEKDHLVKLLKQL 133
Y LV+ Y HI DHL+++ +++
Sbjct: 60 YENLVKLYRHISPDHLLQVCERV 82
Score = 72 (30.4 bits), Expect = 1.6e-24, Sum P(5) = 1.6e-24
Identities = 22/81 (27%), Positives = 35/81 (43%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V + + R + DC + +W DG L+ +L GH + V+ N +A AG
Sbjct: 186 VYCVTFDRTGRRIFTGSDDCLVKIWATDDGHLLATLRGHAAEISDMAVNYENTLLA--AG 243
Query: 603 YDGKTI-VWDIWEGIPIRIYE 622
K I VW + P+ + E
Sbjct: 244 SCDKMIRVWCLQTCAPLAVLE 264
Score = 64 (27.6 bits), Expect = 2.3e-50, Sum P(5) = 2.3e-50
Identities = 14/51 (27%), Positives = 28/51 (54%)
Query: 1682 LDVIQSRLENNYYRGLEAVKHDIAVMLSNAESYFGRNTDLSTKIKRLSDLV 1732
L I+ RLEN +YR + ++ ++ + NA+++ + K +SDL+
Sbjct: 1192 LSTIRQRLENRFYRRMSSLMWEVRYIEHNAQTFNEPGAFIVRTAKFVSDLM 1242
Score = 59 (25.8 bits), Expect = 2.3e-50, Sum P(5) = 2.3e-50
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 1244 LPEV-LESDGTNRTSSDRGADGSQRLNAQIDSTS-EHDP-LGSHSHSHDPLGS-HSHSHS 1299
+P++ L S G N+ S + A+GS L++ I E D LGS S ++ GS S +
Sbjct: 619 IPQMGLTSSGLNQVVSQQAAEGSSPLDSMIQRLQQEQDQRLGSDSRANR--GSVSSPTEV 676
Query: 1300 RKMFNVVYRRS 1310
NV RRS
Sbjct: 677 TSPPNVGLRRS 687
Score = 57 (25.1 bits), Expect = 5.3e-23, Sum P(5) = 5.3e-23
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSME 273
+ I + H + V F SG ++GS D +IW ++
Sbjct: 356 EKISELESHTDKVDSIQFSHSGDRFVSGSRDGTARIWQLQ 395
Score = 54 (24.1 bits), Expect = 1.1e-22, Sum P(5) = 1.1e-22
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 251 FDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDI 288
+D + VIT +++ +K+W+ T + GHE ++
Sbjct: 433 WDCNDNTVITAANNLTLKVWNSYTGNLIHVLMGHEDEV 470
Score = 47 (21.6 bits), Expect = 1.3e-48, Sum P(5) = 1.3e-48
Identities = 15/63 (23%), Positives = 32/63 (50%)
Query: 1679 PLSLDVIQSRL-ENNYYRGLEAVKHDIAVMLSNAESYF-GRNTDLSTKIKRLSDLVTRTL 1736
P+ + +RL Y ++ K D+ ++ SN+++Y + + + + RLS L +
Sbjct: 1351 PMDFGTVLNRLLAGEYDTPMDLCK-DVRLIFSNSKAYTPSKKSRIYSMSLRLSALFEEHI 1409
Query: 1737 SSL 1739
SS+
Sbjct: 1410 SSI 1412
Score = 46 (21.3 bits), Expect = 5.0e-49, Sum P(5) = 5.0e-49
Identities = 17/86 (19%), Positives = 29/86 (33%)
Query: 765 WEPENEVQSDDNDSEYN--VAEEYXXXXXXXXXXXXXXXXXXXXXDSEDGENPMDGLRRS 822
W EN S D S+Y+ A+ EDGE D +
Sbjct: 831 WPDENS-SSSDYSSDYSDWTADAGINLEPPKKTSVKKKKKKNASSSEEDGEKKKDSKKER 889
Query: 823 KRKKQKAEVEIMTSSGRRVKRRILDE 848
+++K + + + KR+ + E
Sbjct: 890 RKEKPDKDGALPKKKKPKEKRKRIPE 915
Score = 42 (19.8 bits), Expect = 4.2e-48, Sum P(5) = 4.2e-48
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 1719 TDLSTKIKRLSDLVTRTLSSL 1739
TDLST +RL + R +SSL
Sbjct: 1190 TDLSTIRQRLENRFYRRMSSL 1210
Score = 41 (19.5 bits), Expect = 0.00058, Sum P(4) = 0.00058
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 1578 W-WDGRVLSVKPKSSEFPDSP 1597
W WD R L + S+F + P
Sbjct: 298 WQWDARTLKFGQRPSKFIERP 318
Score = 38 (18.4 bits), Expect = 3.3e-48, Sum P(5) = 3.3e-48
Identities = 19/73 (26%), Positives = 27/73 (36%)
Query: 1003 GTSSEAHQEATEGNGNRVSYVGNNCSSVDANCGLMERRGRGQFDKLEDYLNLSN-GYK-D 1060
G + Q+A EG+ S + D G R RG + + N G +
Sbjct: 628 GLNQVVSQQAAEGSSPLDSMIQRLQQEQDQRLGSDSRANRGSVSSPTEVTSPPNVGLRRS 687
Query: 1061 GKIRWGGVRARSS 1073
G+I GVR S
Sbjct: 688 GQIE--GVRQMHS 698
Score = 38 (18.4 bits), Expect = 3.1e-29, Sum P(5) = 3.1e-29
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 1232 LHGSSLDIKPNSLPEVLE 1249
L G S IK + +P+V++
Sbjct: 1019 LTGGSFSIKYHDMPDVID 1036
Score = 37 (18.1 bits), Expect = 1.7e-27, Sum P(4) = 1.7e-27
Identities = 5/14 (35%), Positives = 11/14 (78%)
Query: 751 VMIDPLPEFIDVMD 764
V +D P+++D++D
Sbjct: 1336 VDLDEYPDYLDIVD 1349
Score = 37 (18.1 bits), Expect = 2.2e-27, Sum P(4) = 2.2e-27
Identities = 30/146 (20%), Positives = 55/146 (37%)
Query: 1168 YDESKCVNTTDEDTTPYPNHLQNGTIQPSELKEILTPVSTKLRIRSKRILRDADVENQNN 1227
+ SK T + + Y L+ + + ILT + S+R+ R Q
Sbjct: 1380 FSNSKAY-TPSKKSRIYSMSLRLSALFEEHISSILTDFKAAQSLHSERLTR------QRL 1432
Query: 1228 GCDALHGSSLDIKPNSLPEVLESDGTNRTSSDRGADGSQRLNAQIDSTSEHDPLGSHSHS 1287
D L S +K S ++ +S +R S R ++DS + P G S +
Sbjct: 1433 HTDRLTRQS--VKKRRRRS--SSHSSSASSPERKRRVSSRAPPRLDSAAPPTPAGP-SRA 1487
Query: 1288 HDPLGSHSHSHSRKMFNVVYRRSKTN 1313
+H + + VV R++++
Sbjct: 1488 PSLRQTHPQINGKAETPVVPGRTRSS 1513
>UNIPROTKB|Q6RI45 [details] [associations]
symbol:BRWD3 "Bromodomain and WD repeat-containing protein
3" species:9606 "Homo sapiens" [GO:0008360 "regulation of cell
shape" evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0007010 Gene3D:2.130.10.10
PROSITE:PS00678 GO:GO:0008360 InterPro:IPR019775 eggNOG:COG2319
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 KO:K11798
EMBL:AY497046 EMBL:AY497047 EMBL:AY497048 EMBL:AY497049
EMBL:AY497050 EMBL:AY497051 EMBL:AY497052 EMBL:AY497053
EMBL:AY497054 EMBL:AY497055 EMBL:AY497056 EMBL:AY497057
EMBL:AY497058 EMBL:AY497059 EMBL:AY497060 EMBL:AL590031
EMBL:AL512504 EMBL:AL669934 EMBL:BC111490 EMBL:AK095887
IPI:IPI00167547 IPI:IPI00843754 IPI:IPI00844073 IPI:IPI00844236
IPI:IPI00844349 RefSeq:NP_694984.4 UniGene:Hs.147027
UniGene:Hs.613180 HSSP:P16649 ProteinModelPortal:Q6RI45
IntAct:Q6RI45 STRING:Q6RI45 PhosphoSite:Q6RI45 PaxDb:Q6RI45
PRIDE:Q6RI45 Ensembl:ENST00000373275 GeneID:254065 KEGG:hsa:254065
UCSC:uc004edo.3 CTD:254065 GeneCards:GC0XM079926 HGNC:HGNC:17342
HPA:HPA012802 MIM:300553 MIM:300659 neXtProt:NX_Q6RI45 Orphanet:323
PharmGKB:PA134900775 HOVERGEN:HBG108248 InParanoid:Q6RI45
OMA:MTGNNLP OrthoDB:EOG4X3H0H GenomeRNAi:254065 NextBio:92253
Bgee:Q6RI45 CleanEx:HS_BRWD3 Genevestigator:Q6RI45
InterPro:IPR011044 SUPFAM:SSF50969 Uniprot:Q6RI45
Length = 1802
Score = 311 (114.5 bits), Expect = 1.4e-48, Sum P(4) = 1.4e-48
Identities = 109/436 (25%), Positives = 186/436 (42%)
Query: 306 DCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFS 365
DC++++W DG ++ LRGH+A ++ +A + + + S D R+W R +
Sbjct: 201 DCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLI---AAGSCDKVVRVWCLRTC--A 255
Query: 366 PRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTV-FVTGSSDTL------ARV 418
P + S ++ PS+ + + + A+GT+ F T+ +
Sbjct: 256 PVAVLQGHSASITSIQFCPSTKGTNR----YLTSTGADGTICFWQWHVKTMKFRDRPVKF 311
Query: 419 WNACKPNTDDSDQP--NHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTPKFKN 476
+P S + + + +G + V + + G V + + E T K
Sbjct: 312 TERSRPGVQISCSSFSSGGMFITTGSTDHVIRIYYLGSEVPEKIA----ELESHTDKVVA 367
Query: 477 SWFCH--DNI--VTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVXXXXXXXXXXXXXX 532
FC+ D++ V+ SRDG+A IW + + W + +
Sbjct: 368 VQFCNNGDSLRFVSGSRDGTARIWQYQQQE-------WKS---IVLDMATKMTGNNLPSG 417
Query: 533 XXXILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHP 592
I T V M+ W + V+ A+ + + VWN+ G L+H+L+GH + +VL+ HP
Sbjct: 418 EDKI--TKLKVTMVAWDRYDTTVITAVNNFLLKVWNSITGQLLHTLSGHDDEVFVLEAHP 475
Query: 593 FNPRIAMSAGYDGKTIVWDIWEGIPIR-------------IYEISRFRDGASIILSDDVG 639
F+ RI +SAG+DG +WD+ G IR +++ DG +D G
Sbjct: 476 FDQRIILSAGHDGNIFIWDLDRGTKIRNYFNMIEGQGHGAVFDCKFSPDGNHFACTDSHG 535
Query: 640 QLYILNTGQGESQKDAKYDQFFLGDYRPLVQDTYGNVLDQETQLAPHRRNLQDP--LCDS 697
L + G + + FF DYRPL++D VLD++TQ APH L P L D
Sbjct: 536 HLLLFGFGCSKYYEKIPDQMFFHTDYRPLIRDANNYVLDEQTQQAPH---LMPPPFLVDV 592
Query: 698 AMIPYPEPYQTMYQQR 713
P+P +Q + R
Sbjct: 593 DGNPHPTKFQRLVPGR 608
Score = 309 (113.8 bits), Expect = 2.3e-48, Sum P(4) = 2.3e-48
Identities = 99/323 (30%), Positives = 149/323 (46%)
Query: 103 DGMSFPLSYNKLVERYPHIEKDHLVKLLKQLIINTSSPSRAMIGGDAPNAAD-VPTLLGR 161
+G S+ LV HI D+L+K+ +++ P ++ + P + V TLLG
Sbjct: 49 EGKEHRRSFEDLVAANAHIPPDYLLKICERI-----GP---LLDKEIPQSVPGVQTLLGV 100
Query: 162 GSFSLLSYDRD-KGQ--NEIDHPPAHM-RWPHMYADQVRGLGLREIGGGFTRHHRAPSIR 217
G SLL +D K N H R P + + V+ + I T +
Sbjct: 101 GRQSLLRDAKDCKSTLWNGSAFAALHRGRPPELPVNYVKPPNVVNI----TSARQLTG-- 154
Query: 218 AACYAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYC 277
+ + PS+ Q ++ KR+ GH ++VYC FDRSGR + TGSDD LVKIW+ +
Sbjct: 155 CSRFGHIFPSSAYQHIKMHKRILGHLSSVYCVAFDRSGRRIFTGSDDCLVKIWATDDGRL 214
Query: 278 LASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSP 337
LA+ RGH +I+D D ++RVW L P++VL+GH+A++T+I F P
Sbjct: 215 LATLRGHSAEISDMAVNYENTLIAAGSCDKVVRVWCLRTCAPVAVLQGHSASITSIQFCP 274
Query: 338 RP-GSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIF 396
G+ L S+ DGT W R RP S G Q I
Sbjct: 275 STKGTNRYLTSTGADGTICFWQWHVKTMKFR---DRPV------KFTERSRPGVQ---IS 322
Query: 397 CCAFNANGTVFVTGSSDTLARVW 419
C +F++ G TGS+D + R++
Sbjct: 323 CSSFSSGGMFITTGSTDHVIRIY 345
Score = 263 (97.6 bits), Expect = 1.4e-48, Sum P(4) = 1.4e-48
Identities = 124/541 (22%), Positives = 227/541 (41%)
Query: 1103 EVNGHVKPEKDGIDISCGEEITNCGDNTDEVPLKNVKNLSGENNDVYSGDASCKEQQS-- 1160
+V+G+ P K + G E NC D L V N GE + G + + +S
Sbjct: 591 DVDGNPHPTKFQRLVP-GRE--NCKDEQLIPQLGYVANGDGEVVEQVIGQQTNDQDESIL 647
Query: 1161 -GF-SELNYYDESKCVNTTDEDTTPYPN-HLQNGTIQPSELKEILTPVSTKLRIRSKRIL 1217
G EL + + +N D P + NG ++ + +I + + +LR S +I
Sbjct: 648 DGIIRELQREQDLRLINEGDVPHLPVNRAYSVNGALRSPNM-DISSSPNIRLRRHSSQI- 705
Query: 1218 RDADVENQNNGCDALHGSSLDIKPNSLPEVLE--SDGTNRTSSD-RGADGSQRLNAQIDS 1274
+ + NN + + D+ S V+ ++G +R + R A G ++
Sbjct: 706 -EGVRQMHNNAPRSQMATERDLMAWSRRVVVNELNNGVSRVQEECRTAKGDIEISLYTVE 764
Query: 1275 TSEHDPLGSHSHSHDPLGSHSHSHSRKMFNVVYRRSKTNRDRTNSEGDGGGVGESTLNAN 1334
+ + + ++P S +++ Y+ + + GV E + +++
Sbjct: 765 KKKKPSYTTQRNDYEPSCGRSLRRTQRKRQHTYQTRSNIEHNSQASCQNSGVQEDSDSSS 824
Query: 1335 NNNFHESATDGSRRTRSMGLKTTTCDPDNVS--SNLRLEQ--HNQPEDMYSGHNRSTSR- 1389
+ +D S + ++ + D+ S S+ + + QP + R T+R
Sbjct: 825 EEDETVGTSDASVEDPVVEWQSESSSSDSSSEYSDWTADAGINLQPPKRQT---RQTTRK 881
Query: 1390 -CQLPHEE-WGSSSKMTVGLRSTRNRRTSYLFCDSSPIDRRKTHQSLRKGSWLMLSTHEE 1447
C EE S + + TR ++ + P + Q W+ L T
Sbjct: 882 ICSSSDEENLKSLEERQKKPKQTRKKKGGLVSIAGEPNEEWFAPQ------WI-LDTIPR 934
Query: 1448 GSRYIPQLGDEVVYLRQGHQEYIN-------YSGSREVGPWITVKGNIRAVEFCKVESLE 1500
S ++PQ+GDE++Y RQGH+ Y+ YS + + PW K ++R EF K+ ++
Sbjct: 935 RSPFVPQMGDELIYFRQGHEAYVRAVRKSKIYSVNLQKQPWN--KMDLREQEFVKIVGIK 992
Query: 1501 YATASGSGDSCCKMTLKFIDPTSS-VSNMTFRLTLPEVTGFPDFLVERTRFDAAIQRNWT 1559
Y G CC + L F+DP S ++ +F + ++ DFLV ++ A +RNW
Sbjct: 993 YEV--GPPTLCC-LKLAFLDPISGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQ 1049
Query: 1560 CRDKCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPTETHLHSPWE 1619
D+ + S D +WW G V S +P E+PDS ++ Y+V + + E SPW+
Sbjct: 1050 IGDRFR------SIIDDAWWFGTVESQQPFQPEYPDSSFQCYSVHW--DNNEREKMSPWD 1101
Query: 1620 L 1620
+
Sbjct: 1102 M 1102
Score = 116 (45.9 bits), Expect = 6.5e-34, Sum P(4) = 6.5e-34
Identities = 64/300 (21%), Positives = 119/300 (39%)
Query: 1451 YIPQLGDEVVYLRQGHQEYINYSGSREVGPWITVKGNIRAVEFCKVESLEYATASGSGDS 1510
Y Q G E Y+R + I YS + + PW K ++R EF K+ ++Y G
Sbjct: 948 YFRQ-GHEA-YVRAVRKSKI-YSVNLQKQPWN--KMDLREQEFVKIVGIKYEV--GPPTL 1000
Query: 1511 CCKMTLKFIDPTSSVSNMTFRLTLPEVTGFPDFLVERTRFDAAIQRNWTCRDKCK----- 1565
CC + ++ +F + ++ DFLV ++ A +RNW D+ +
Sbjct: 1001 CCLKLAFLDPISGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQIGDRFRSIIDD 1060
Query: 1566 VWWKN--ESDE--DGSWWDG--RVLSVKPKSSEFPD-SPWERYTVQYKTE-PTETHLHSP 1617
WW ES + + D + SV ++E SPW+ + T P E P
Sbjct: 1061 AWWFGTVESQQPFQPEYPDSSFQCYSVHWDNNEREKMSPWDMEPIPEGTAFPDEVGAGVP 1120
Query: 1618 WELFDSDTQWEQPRIDDDNRNKLLSAFAKLEQSANRVQDQYGVQKLK---QVSQKTNFTN 1674
+ +P+ + + ++ Q N + +S +
Sbjct: 1121 VSQEELTALLYKPQEGEWGAHSRDEECERVIQGINHLLSLDFASPFAVPVDLSAYPLYCT 1180
Query: 1675 RFPVPLSLDVIQSRLENNYYRGLEAVKHDIAVMLSNAESYFGRNTDLSTKIKRLSDLVTR 1734
P L+ I+ RLEN +YR + A+ ++ + NA ++ ++ + K ++D++ R
Sbjct: 1181 VVAYPTDLNTIRRRLENRFYRRISALMWEVRYIEHNARTFNEPDSPIVKAAKIVTDVLLR 1240
Score = 109 (43.4 bits), Expect = 1.4e-48, Sum P(4) = 1.4e-48
Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 51 EVYFLIMHFLSTGPCHRTYGQFWNELLEHQLLPRRYHAWYSRSGLPSGDENDDGMSFPLS 110
E+Y+LI FL +GPC+++ EL EHQL+PRR W +G S
Sbjct: 11 ELYYLIARFLQSGPCNKSAQVLVQELEEHQLIPRRLD-W-------------EGKEHRRS 56
Query: 111 YNKLVERYPHIEKDHLVKLLKQL 133
+ LV HI D+L+K+ +++
Sbjct: 57 FEDLVAANAHIPPDYLLKICERI 79
Score = 73 (30.8 bits), Expect = 6.4e-24, Sum P(4) = 6.4e-24
Identities = 21/81 (25%), Positives = 36/81 (44%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V + + R + DC + +W DG L+ +L GH+ + V+ N IA AG
Sbjct: 183 VYCVAFDRSGRRIFTGSDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLIA--AG 240
Query: 603 YDGKTI-VWDIWEGIPIRIYE 622
K + VW + P+ + +
Sbjct: 241 SCDKVVRVWCLRTCAPVAVLQ 261
Score = 61 (26.5 bits), Expect = 1.1e-22, Sum P(4) = 1.1e-22
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 251 FDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDI 288
+DR VIT ++ L+K+W+ T L + GH+ ++
Sbjct: 431 WDRYDTTVITAVNNFLLKVWNSITGQLLHTLSGHDDEV 468
Score = 60 (26.2 bits), Expect = 3.6e-27, Sum P(5) = 3.6e-27
Identities = 44/164 (26%), Positives = 69/164 (42%)
Query: 975 LKL-PVRDSNKHELQERTSDKCNQLVS--VIGTSSEAHQEATEGNGNRVSYVGNNCSSVD 1031
+KL P D N RTS + VS G S + +G + S+ G + S
Sbjct: 1474 MKLQPKNDQNTSVSHARTSSPFSSPVSDAAEGLSLYLLDDEPDGPFSSSSFGGYSRSGNS 1533
Query: 1032 ANCGLMER-RGRGQFDKLEDYLN--LSNGYKDGKIRWGGVRARSSKRLKIGEMMPLDANN 1088
+ G + R R K + L+ L+NG DG+ G++ K L E D N
Sbjct: 1534 HDPGKAKSFRNRVLPVKQDHSLDGPLTNG--DGREPRTGIKR---KLLSASEE---DENM 1585
Query: 1089 GSGIHLDDDKEKESEVNGHVKPEKDG-IDISCGEEITNCGDNTD 1131
G +D ++KE++ H+ + G + S E T CG ++D
Sbjct: 1586 GG----EDKEKKETKEKSHLSTSESGELGSSLSSEST-CGSDSD 1624
Score = 47 (21.6 bits), Expect = 7.5e-26, Sum P(5) = 7.5e-26
Identities = 13/26 (50%), Positives = 13/26 (50%)
Query: 1274 STSEHDPLGSHSHSHDPLGSHSHSHS 1299
STSE LGS S GS S S S
Sbjct: 1602 STSESGELGSSLSSESTCGSDSDSES 1627
Score = 42 (19.8 bits), Expect = 6.5e-34, Sum P(4) = 6.5e-34
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 762 VMDWEPENEVQSDDNDSEYN 781
V++W+ E+ S D+ SEY+
Sbjct: 841 VVEWQSESS--SSDSSSEYS 858
Score = 41 (19.5 bits), Expect = 1.7e-25, Sum P(4) = 1.7e-25
Identities = 15/74 (20%), Positives = 27/74 (36%)
Query: 649 GESQKDAKYDQFFLGDYRPLVQDTYGNVLDQETQLAPHRRNLQDPLCDSAMIPYPEPYQT 708
GES +D + D+ L Q Y ++ Q+ R++ D + +P+Q
Sbjct: 1017 GESFSIKYHDMPDVIDFLVLHQ-FYNEAKERNWQIGDRFRSIIDDAWWFGTVESQQPFQP 1075
Query: 709 MYQQRRLGALGIEW 722
Y + W
Sbjct: 1076 EYPDSSFQCYSVHW 1089
Score = 39 (18.8 bits), Expect = 1.8e-20, Sum P(4) = 1.8e-20
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVH 576
GV ++ + + +L DC+ +WN + + +H
Sbjct: 93 GVQTLL-GVGRQSLLRDAKDCKSTLWNGSAFAALH 126
Score = 37 (18.1 bits), Expect = 1.4e-48, Sum P(4) = 1.4e-48
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 1719 TDLSTKIKRLSDLVTRTLSSL 1739
TDL+T +RL + R +S+L
Sbjct: 1186 TDLNTIRRRLENRFYRRISAL 1206
Score = 37 (18.1 bits), Expect = 3.6e-27, Sum P(5) = 3.6e-27
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 835 TSSGRRVKRR 844
TSSGR+VK R
Sbjct: 1283 TSSGRKVKCR 1292
Score = 37 (18.1 bits), Expect = 3.7e-14, Sum P(3) = 3.7e-14
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 686 HRRNLQDPLCDSAMIP 701
HRR+ +D + +A IP
Sbjct: 53 HRRSFEDLVAANAHIP 68
>MGI|MGI:3029414 [details] [associations]
symbol:Brwd3 "bromodomain and WD repeat domain containing 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0007010 "cytoskeleton organization" evidence=ISO] [GO:0008360
"regulation of cell shape" evidence=ISO] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
MGI:MGI:3029414 GO:GO:0007010 Gene3D:2.130.10.10 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 eggNOG:COG2319 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 KO:K11798
GeneTree:ENSGT00700000104382 CTD:254065 HOVERGEN:HBG108248
OrthoDB:EOG4X3H0H InterPro:IPR011044 SUPFAM:SSF50969 EMBL:AK050539
EMBL:AK139563 EMBL:AK163354 EMBL:BX000698 EMBL:AL731764
EMBL:BC082562 IPI:IPI00652540 IPI:IPI00660178 IPI:IPI00750468
RefSeq:NP_001074946.1 UniGene:Mm.100112 UniGene:Mm.426127
ProteinModelPortal:A2AHJ4 SMR:A2AHJ4 PhosphoSite:A2AHJ4
PRIDE:A2AHJ4 Ensembl:ENSMUST00000101283 Ensembl:ENSMUST00000150434
GeneID:382236 KEGG:mmu:382236 UCSC:uc009ucm.1 UCSC:uc009ucn.1
HOGENOM:HOG000203884 InParanoid:A2AHJ4 ChiTaRS:BRWD3 NextBio:403145
Bgee:A2AHJ4 CleanEx:MM_BRWD3 Genevestigator:A2AHJ4 Uniprot:A2AHJ4
Length = 1799
Score = 314 (115.6 bits), Expect = 7.2e-48, Sum P(5) = 7.2e-48
Identities = 99/323 (30%), Positives = 148/323 (45%)
Query: 103 DGMSFPLSYNKLVERYPHIEKDHLVKLLKQLIINTSSPSRAMIGGDAPNAAD-VPTLLGR 161
+G S+ LV HI D+L+K+ +++ P ++ + P + V TLLG
Sbjct: 49 EGKEHRRSFEDLVAANAHIPPDYLLKICERI-----GP---LLDKEIPQSVPGVQTLLGV 100
Query: 162 GSFSLLSYDRD-KGQ--NEIDHPPAHM-RWPHMYADQVRGLGLREIGGGFTRHHRAPSIR 217
G SLL +D K N H R P + + V+ + I T +
Sbjct: 101 GRQSLLRDAKDCKSTLWNGSAFAALHRGRPPELPVNYVKPPNVVNI----TSARQLTGCS 156
Query: 218 AACYAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYC 277
+ PS+ Q ++ KR+ GH ++VYC FDRSGR + TGSDD LVKIW+ +
Sbjct: 157 RFSHVF--PSSAYQHIKMHKRILGHLSSVYCVAFDRSGRRIFTGSDDCLVKIWATDDGRL 214
Query: 278 LASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSP 337
LA+ RGH +I+D D ++RVW L P++VL+GH+A++T+I F P
Sbjct: 215 LATLRGHSAEISDMAVNYENTLIAAGSCDKVVRVWCLRTCAPVAVLQGHSASITSIQFCP 274
Query: 338 RP-GSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIF 396
G+ L S+ DGT W R RP S G Q I
Sbjct: 275 STKGTTRYLTSTGADGTICFWQWHVKTMKFR---DRPV------KFTERSRPGVQ---IS 322
Query: 397 CCAFNANGTVFVTGSSDTLARVW 419
C +F++ G TGS+D + R++
Sbjct: 323 CSSFSSGGMFITTGSTDHVIRIY 345
Score = 314 (115.6 bits), Expect = 7.2e-48, Sum P(5) = 7.2e-48
Identities = 107/436 (24%), Positives = 186/436 (42%)
Query: 306 DCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFS 365
DC++++W DG ++ LRGH+A ++ +A + + + S D R+W R +
Sbjct: 201 DCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLI---AAGSCDKVVRVWCLRTC--A 255
Query: 366 PRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTV-FVTGSSDTL------ARV 418
P + S ++ PS+ + + + A+GT+ F T+ +
Sbjct: 256 PVAVLQGHSASITSIQFCPSTKGTTR----YLTSTGADGTICFWQWHVKTMKFRDRPVKF 311
Query: 419 WNACKPNTDDSDQP--NHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTPKFKN 476
+P S + + + +G + V + + G + + + E T K
Sbjct: 312 TERSRPGVQISCSSFSSGGMFITTGSTDHVIRIYYLGSEIPEKIA----ELESHTDKVVA 367
Query: 477 SWFCH--DNI--VTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVXXXXXXXXXXXXXX 532
FC+ D++ V+ SRDG+A IW + + W + +
Sbjct: 368 VQFCNNGDSLRFVSGSRDGTARIWQYQQQE-------WKS---IVLDMATKMSGNNLTSA 417
Query: 533 XXXILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHP 592
+ T V M+ W + V+ A+ + + VWN+ G L+H+L+GH + +VL+ HP
Sbjct: 418 EDKV--TKLKVTMVAWDRYDTTVITAVNNFLLKVWNSVTGQLLHTLSGHDDEVFVLEAHP 475
Query: 593 FNPRIAMSAGYDGKTIVWDIWEGIPIR-------------IYEISRFRDGASIILSDDVG 639
F+ RI +SAG+DG +WD+ G IR +++ DG +D G
Sbjct: 476 FDQRIILSAGHDGNIFIWDLDRGTKIRNYFNMIEGQGHGAVFDCKFSPDGNHFACTDSHG 535
Query: 640 QLYILNTGQGESQKDAKYDQFFLGDYRPLVQDTYGNVLDQETQLAPHRRNLQDP--LCDS 697
L + G + + FF DYRPL++D VLD++TQ APH L P L D
Sbjct: 536 HLLLFGFGCSKYYEKIPDQMFFHTDYRPLIRDANNYVLDEQTQQAPH---LMPPPFLVDV 592
Query: 698 AMIPYPEPYQTMYQQR 713
P+P +Q + R
Sbjct: 593 DGNPHPTKFQRLVPGR 608
Score = 243 (90.6 bits), Expect = 7.2e-48, Sum P(5) = 7.2e-48
Identities = 61/190 (32%), Positives = 99/190 (52%)
Query: 1439 WLMLSTHEEGSRYIPQLGDEVVYLRQGHQEYIN-------YSGSREVGPWITVKGNIRAV 1491
W+ L T S ++PQ+GDE++Y RQGH+ Y+ YS + + PW K ++R
Sbjct: 925 WI-LDTIPRRSPFVPQMGDELIYFRQGHEAYVRAVRKSKIYSVNLQKQPWN--KMDLREQ 981
Query: 1492 EFCKVESLEYATASGSGDSCCKMTLKFIDPTSS-VSNMTFRLTLPEVTGFPDFLVERTRF 1550
EF K+ ++Y G CC + L F+DP S ++ +F + ++ DFLV +
Sbjct: 982 EFVKIVGIKYEI--GPPTLCC-LKLAFLDPISGKMTGESFSIKYHDMPDVIDFLVLHQFY 1038
Query: 1551 DAAIQRNWTCRDKCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPT 1610
+ A +RNW D+ + S D +WW G V S +P E+PDS ++ Y+V + +
Sbjct: 1039 NEAKERNWQIGDRFR------SIIDDAWWFGTVESQQPFQPEYPDSSFQCYSVHW--DNN 1090
Query: 1611 ETHLHSPWEL 1620
E SPW++
Sbjct: 1091 EREKMSPWDM 1100
Score = 115 (45.5 bits), Expect = 3.9e-34, Sum P(4) = 3.9e-34
Identities = 64/300 (21%), Positives = 119/300 (39%)
Query: 1451 YIPQLGDEVVYLRQGHQEYINYSGSREVGPWITVKGNIRAVEFCKVESLEYATASGSGDS 1510
Y Q G E Y+R + I YS + + PW K ++R EF K+ ++Y G
Sbjct: 946 YFRQ-GHEA-YVRAVRKSKI-YSVNLQKQPWN--KMDLREQEFVKIVGIKYEI--GPPTL 998
Query: 1511 CCKMTLKFIDPTSSVSNMTFRLTLPEVTGFPDFLVERTRFDAAIQRNWTCRDKCK----- 1565
CC + ++ +F + ++ DFLV ++ A +RNW D+ +
Sbjct: 999 CCLKLAFLDPISGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQIGDRFRSIIDD 1058
Query: 1566 VWWKN--ESDE--DGSWWDG--RVLSVKPKSSEFPD-SPWERYTVQYKTE-PTETHLHSP 1617
WW ES + + D + SV ++E SPW+ + T P E P
Sbjct: 1059 AWWFGTVESQQPFQPEYPDSSFQCYSVHWDNNEREKMSPWDMEPIPDGTAFPDEVGAGIP 1118
Query: 1618 WELFDSDTQWEQPRIDDDNRNKLLSAFAKLEQSANRVQDQYGVQKLK---QVSQKTNFTN 1674
+ +P+ + + ++ Q N + +S +
Sbjct: 1119 VSQEELTALLYKPQEGEWGAHSRDEECERVIQGINNLLSLDFASPFAVPVDLSAYPLYCT 1178
Query: 1675 RFPVPLSLDVIQSRLENNYYRGLEAVKHDIAVMLSNAESYFGRNTDLSTKIKRLSDLVTR 1734
P L+ I+ RLEN +YR + A+ ++ + NA ++ ++ + K ++D++ R
Sbjct: 1179 VVAYPTDLNTIKQRLENRFYRRISALMWEVRYIEHNARTFNEPDSPIVKAAKIVTDVLLR 1238
Score = 109 (43.4 bits), Expect = 7.2e-48, Sum P(5) = 7.2e-48
Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 51 EVYFLIMHFLSTGPCHRTYGQFWNELLEHQLLPRRYHAWYSRSGLPSGDENDDGMSFPLS 110
E+Y+LI FL +GPC+++ EL EHQL+PRR W +G S
Sbjct: 11 ELYYLIARFLQSGPCNKSAQVLVQELEEHQLIPRRLD-W-------------EGKEHRRS 56
Query: 111 YNKLVERYPHIEKDHLVKLLKQL 133
+ LV HI D+L+K+ +++
Sbjct: 57 FEDLVAANAHIPPDYLLKICERI 79
Score = 73 (30.8 bits), Expect = 5.4e-22, Sum P(6) = 5.4e-22
Identities = 21/81 (25%), Positives = 36/81 (44%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V + + R + DC + +W DG L+ +L GH+ + V+ N IA AG
Sbjct: 183 VYCVAFDRSGRRIFTGSDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLIA--AG 240
Query: 603 YDGKTI-VWDIWEGIPIRIYE 622
K + VW + P+ + +
Sbjct: 241 SCDKVVRVWCLRTCAPVAVLQ 261
Score = 62 (26.9 bits), Expect = 5.9e-22, Sum P(5) = 5.9e-22
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 251 FDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDI 288
+DR VIT ++ L+K+W+ T L + GH+ ++
Sbjct: 431 WDRYDTTVITAVNNFLLKVWNSVTGQLLHTLSGHDDEV 468
Score = 54 (24.1 bits), Expect = 7.2e-48, Sum P(5) = 7.2e-48
Identities = 17/75 (22%), Positives = 36/75 (48%)
Query: 1667 SQKTNFTNRFPVPLSLDVIQSRLEN-NYYRGLEAVKHDIAVMLSNAESYFG-RNTDLSTK 1724
S ++ + P+ ++ LE+ NY LE K D+ + SN+++Y + + + +
Sbjct: 1354 SLSEDYQDGIDTPMDFSTVKETLESGNYDSPLEFYK-DVRQIFSNSKAYTSNKKSRIYSM 1412
Query: 1725 IKRLSDLVTRTLSSL 1739
RLS L + ++
Sbjct: 1413 TLRLSALFENHIKNI 1427
Score = 42 (19.8 bits), Expect = 7.2e-48, Sum P(5) = 7.2e-48
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 762 VMDWEPENEVQSDDNDSEYN 781
V++W+ E+ S D+ SEY+
Sbjct: 840 VVEWQSESS--SSDSSSEYS 857
Score = 42 (19.8 bits), Expect = 4.5e-26, Sum P(5) = 4.5e-26
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 1274 STSEHDPLGSHSHSHDPLGSHSHSHS 1299
S+SE LGS S GS S S S
Sbjct: 1599 SSSESGELGSSLSSESTSGSDSDSES 1624
Score = 41 (19.5 bits), Expect = 2.8e-27, Sum P(5) = 2.8e-27
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 1220 ADVENQNNGCDALHGSSLDIKPNSLPEVLESDGTNRTSSDRGA 1262
+D+ + N A S D++ +S L+SDG TSS R A
Sbjct: 1246 SDILDTYNKIKAEDPDSSDLEEDSEMVDLDSDGPG-TSSGRRA 1287
Score = 41 (19.5 bits), Expect = 3.5e-27, Sum P(5) = 3.5e-27
Identities = 15/74 (20%), Positives = 27/74 (36%)
Query: 649 GESQKDAKYDQFFLGDYRPLVQDTYGNVLDQETQLAPHRRNLQDPLCDSAMIPYPEPYQT 708
GES +D + D+ L Q Y ++ Q+ R++ D + +P+Q
Sbjct: 1015 GESFSIKYHDMPDVIDFLVLHQ-FYNEAKERNWQIGDRFRSIIDDAWWFGTVESQQPFQP 1073
Query: 709 MYQQRRLGALGIEW 722
Y + W
Sbjct: 1074 EYPDSSFQCYSVHW 1087
Score = 41 (19.5 bits), Expect = 1.9e-19, Sum P(5) = 1.9e-19
Identities = 27/95 (28%), Positives = 43/95 (45%)
Query: 1191 GTIQPSELKEILTPVSTKLRIRSKRILRDA-DVENQN-NGCD--ALHGSSLDIKPNSLPE 1246
G + E+ + + V T L + + +LRDA D ++ NG ALH +P LP
Sbjct: 80 GPLLDKEIPQSVPGVQTLLGVGRQSLLRDAKDCKSTLWNGSAFAALHRG----RPPELPV 135
Query: 1247 --VLESDGTNRTSSDRGADGSQRLNAQIDSTS-EH 1278
V + N TS+ R G R + S++ +H
Sbjct: 136 NYVKPPNVVNITSA-RQLTGCSRFSHVFPSSAYQH 169
Score = 39 (18.8 bits), Expect = 1.2e-18, Sum P(6) = 1.2e-18
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVH 576
GV ++ + + +L DC+ +WN + + +H
Sbjct: 93 GVQTLL-GVGRQSLLRDAKDCKSTLWNGSAFAALH 126
Score = 38 (18.4 bits), Expect = 1.8e-47, Sum P(5) = 1.8e-47
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 1319 SEGDGGGVGESTLNANNNNFHESATDG 1345
+ GDG V E + N+ ES DG
Sbjct: 624 ANGDGEVV-EQVIGQQTNDQEESILDG 649
Score = 38 (18.4 bits), Expect = 5.4e-22, Sum P(6) = 5.4e-22
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 1232 LHGSSLDIKPNSLPEVLESDGTNRTSSDRGADGS 1265
L G S I S+ + GT R + GADG+
Sbjct: 260 LQGHSASI--TSIQFCPSTKGTTRYLTSTGADGT 291
Score = 37 (18.1 bits), Expect = 8.8e-27, Sum P(5) = 8.8e-27
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 536 ILPTPRGVNMIVWSLDNRFV--LAAIM-DCRICVWNA 569
++ P +N I L+NRF ++A+M + R NA
Sbjct: 1179 VVAYPTDLNTIKQRLENRFYRRISALMWEVRYIEHNA 1215
Score = 37 (18.1 bits), Expect = 2.4e-12, Sum P(5) = 2.4e-12
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 686 HRRNLQDPLCDSAMIP 701
HRR+ +D + +A IP
Sbjct: 53 HRRSFEDLVAANAHIP 68
>UNIPROTKB|F1NXP9 [details] [associations]
symbol:PHIP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006606 "protein
import into nucleus" evidence=IEA] [GO:0007010 "cytoskeleton
organization" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEA] [GO:0010800 "positive regulation
of peptidyl-threonine phosphorylation" evidence=IEA] [GO:0022604
"regulation of cell morphogenesis" evidence=IEA] [GO:0033138
"positive regulation of peptidyl-serine phosphorylation"
evidence=IEA] [GO:0040008 "regulation of growth" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
GO:GO:0005634 GO:GO:0008286 GO:GO:0007010 GO:GO:0043066
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284
GO:GO:0045944 GO:GO:0010800 GO:GO:0006606 GO:GO:0040008
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0033138 GO:GO:0022604
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 OMA:PGTIQVN
EMBL:AADN02002461 EMBL:AADN02002458 EMBL:AADN02002459
EMBL:AADN02002460 IPI:IPI00574522 Ensembl:ENSGALT00000025610
Uniprot:F1NXP9
Length = 1818
Score = 350 (128.3 bits), Expect = 4.9e-46, Sum P(2) = 4.9e-46
Identities = 122/439 (27%), Positives = 194/439 (44%)
Query: 306 DCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFS 365
DC++++W DG ++ LRGH A ++ +A + + + S D R+W R +
Sbjct: 194 DCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTMI---AAGSCDKMIRVWCLRTC--A 248
Query: 366 PRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTV-FVTGSSDTLARVWNACKP 424
P + S ++ +P S + + + A+GT+ F + TL ++ N +P
Sbjct: 249 PLAVLQGHSASITSLQFSPLCSGSKR----YLSSTGADGTICFWLWDAGTL-KI-NP-RP 301
Query: 425 NTDDSDQPNHEIDVL------------SGHENDVNYVQFSGCAVASRFSLAD--SSKEDS 470
T +++P + ++ +G + + V F G + S + + K DS
Sbjct: 302 -TKFTERPRPGVQMICSSFSAGGMFLATGSTDHIIRVYFFGSGQPEKISELEFHTDKVDS 360
Query: 471 TPKFKNSWFCHDNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVXXXXXXXXXXXX 530
+F NS V+ SRDG+A IW + R W + +
Sbjct: 361 I-QFSNS---SSRFVSGSRDGTARIWQFKRRE-------WKS---ILLDMATRPSGQTLQ 406
Query: 531 XXXXXILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDV 590
I T V M+ W + V+ A+ + + VWN+ G L+H L GH + +VL+
Sbjct: 407 GVEDKI--TKLKVTMVAWDRHDNSVITAVNNMTLKVWNSFTGQLIHILMGHEDEVFVLEP 464
Query: 591 HPFNPRIAMSAGYDGKTIVWDIWEGIPIR-------------IYEISRFRDGASIILSDD 637
HPF+PR+ SAG+DG IVWD+ G+ IR +++ DG +D
Sbjct: 465 HPFDPRVLFSAGHDGNVIVWDLARGVKIRSYFNMIEGQGHGAVFDCKCSPDGQHFACTDS 524
Query: 638 VGQLYILNTGQGESQKDAKYDQ-FFLGDYRPLVQDTYGNVLDQETQLAPHRRNLQDP--L 694
G L I G S+ D DQ FF DYRPL++D VLD++TQ APH L P L
Sbjct: 525 HGHLLIFGFGSS-SKYDKIADQMFFHSDYRPLIRDANNFVLDEQTQQAPH---LMPPPFL 580
Query: 695 CDSAMIPYPEPYQTMYQQR 713
D P+P YQ + R
Sbjct: 581 VDVDGNPHPARYQRLVPGR 599
Score = 316 (116.3 bits), Expect = 2.1e-42, Sum P(2) = 2.1e-42
Identities = 103/305 (33%), Positives = 146/305 (47%)
Query: 104 GMSFPLSYNKLVERYPHIEKDHLVKLLKQLIINTSSPSRAMIGGDAPNAAD-VPTLLGRG 162
G P SY LV+ Y H+ DHL+++ +L P ++ + P + V TLLG G
Sbjct: 43 GKEHPRSYQNLVKYYRHLAPDHLLQICHRL-----GP---LLEQEIPQSVPGVQTLLGAG 94
Query: 163 SFSLLSYDRD------KGQN----EIDHPPAHMRWPHMYADQ---VRGLGLREIGGGFTR 209
SLL ++ KG PP P Y V L R++ G +
Sbjct: 95 RQSLLRTNKSCKHVVWKGSALAALHCGRPPES---PVNYGSPPSIVDTLFSRKLNGKYRL 151
Query: 210 HHRAPSIRAACYAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKI 269
P+ A Y Q M+ KR+ GH ++VYC FDR+GR + TGSDD LVKI
Sbjct: 152 ERLVPT---AVY---------QHMKMHKRILGHLSSVYCVTFDRTGRRIFTGSDDCLVKI 199
Query: 270 WSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAA 329
W+ + LA+ RGH +I+D D +IRVW L P++VL+GH+A+
Sbjct: 200 WATDDGRLLATLRGHAAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPLAVLQGHSAS 259
Query: 330 VTAIAFSPR-PGSVYQLLSSSDDGT-CR-IWDARYSQFSPRI--YIPRPSDAVAGRNMAP 384
+T++ FSP GS L S+ DGT C +WDA + +PR + RP V + +
Sbjct: 260 ITSLQFSPLCSGSKRYLSSTGADGTICFWLWDAGTLKINPRPTKFTERPRPGV--QMICS 317
Query: 385 SSSAG 389
S SAG
Sbjct: 318 SFSAG 322
Score = 311 (114.5 bits), Expect = 7.3e-42, Sum P(2) = 7.3e-42
Identities = 75/199 (37%), Positives = 108/199 (54%)
Query: 226 PSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHE 285
P+ + Q M+ KR+ GH ++VYC FDR+GR + TGSDD LVKIW+ + LA+ RGH
Sbjct: 156 PTAVYQHMKMHKRILGHLSSVYCVTFDRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHA 215
Query: 286 GDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPR-PGSVYQ 344
+I+D D +IRVW L P++VL+GH+A++T++ FSP GS
Sbjct: 216 AEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPLAVLQGHSASITSLQFSPLCSGSKRY 275
Query: 345 LLSSSDDGT-CR-IWDARYSQFSPRI--YIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAF 400
L S+ DGT C +WDA + +PR + RP V Q+ C +F
Sbjct: 276 LSSTGADGTICFWLWDAGTLKINPRPTKFTERPRPGV----------------QMICSSF 319
Query: 401 NANGTVFVTGSSDTLARVW 419
+A G TGS+D + RV+
Sbjct: 320 SAGGMFLATGSTDHIIRVY 338
Score = 238 (88.8 bits), Expect = 4.9e-46, Sum P(2) = 4.9e-46
Identities = 117/502 (23%), Positives = 203/502 (40%)
Query: 1280 PLGSHSHSHDPLGSHSHSHSRKMFNVVYR---------RSKTNRDRTNSEGDGGGVGEST 1330
P S +HSHD L + S ++ YR R + +S D G V ++
Sbjct: 761 PTFSKNHSHDHLLDTNDSRKQQANQHNYRTRYAVEEPARPAEELENGHSSSDEGEVVVAS 820
Query: 1331 LNANNNNFHESATDGSRRTRSMGLKTTTCD------PDNVSSNLRLEQHNQPEDMYSGHN 1384
+ ++ +DGS S T D P L+ ++ + G
Sbjct: 821 GGTSEDDERAWHSDGSSSDYSSDYSDWTADAGINLQPPKKIPKLKTKKAESSSEDEEGPE 880
Query: 1385 RSTSRCQLPHEEWGSSSK----MTVGLRSTRNRRTSYLFCDSSPIDRRKTHQSLRKGSWL 1440
+ + + ++ GS K + R + R+ L + T + +W+
Sbjct: 881 KQKKQIKKERKK-GSEEKDGPSTSPKKRKPKERKQKRLAVGVLA-ENGLTLEEWLPSAWI 938
Query: 1441 MLSTHEEGSRYIPQLGDEVVYLRQGHQEYI-----N--YSGSREVGPWITVKGNIRAVEF 1493
T ++PQ+GDEV Y RQGH+ Y+ N YS + + PW K +R E
Sbjct: 939 T-DTVPRRCPFVPQMGDEVYYFRQGHEAYVVMAKKNKIYSINPKKQPWH--KMELREQEL 995
Query: 1494 CKVESLEYATASGSGDSCCKMTLKFIDP-TSSVSNMTFRLTLPEVTGFPDFLVERTRFDA 1552
K+ ++Y G CC + L F+DP T ++ +F + ++ DFLV R +FD
Sbjct: 996 MKIVGIKYEV--GLPTLCC-LKLAFLDPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFDD 1052
Query: 1553 AIQRNWTCRDKCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPTET 1612
A R W D+ + S D +WW G + S +P ++PDS ++ Y V + TE
Sbjct: 1053 AKHRRWNIGDRFR------SVIDDAWWFGTIESQEPLQPDYPDSLFQCYNVCWDNGDTEK 1106
Query: 1613 HLHSPWEL--------FDSDTQWEQPRIDDDNRNKLLSAFAKLE-QSANRVQDQYGVQKL 1663
SPW++ F + P D++ R L + L+ + +R +DQ + +
Sbjct: 1107 M--SPWDMELIPTNAVFPEELGTSVPLTDEERRTLL---YKPLDGEWGSRTRDQECDRII 1161
Query: 1664 KQVSQ--KTNFTNRFPVPLSLDVIQSRLENNYYRGLEAVKHDIAVMLSNAESYFGRN-TD 1720
++Q + + F P+ L Y + A D++ + ES F R +
Sbjct: 1162 AGINQLMTLDIASAFVAPVDLQAYPM------YCTVVAYPTDLSTIKQRLESRFYRRLSS 1215
Query: 1721 LSTKIKRLSDLVTRTLSSLKAP 1742
L +++ + TRT + +P
Sbjct: 1216 LMWEVRYIEHN-TRTFNEPGSP 1236
Score = 109 (43.4 bits), Expect = 3.2e-33, Sum P(3) = 3.2e-33
Identities = 65/300 (21%), Positives = 115/300 (38%)
Query: 1472 YSGSREVGPWITVKGNIRAVEFCKVESLEYATASGSGDSCCKMTLKFIDPTSSVSNMTFR 1531
YS + + PW K +R E K+ ++Y G CC T ++ +F
Sbjct: 976 YSINPKKQPWH--KMELREQELMKIVGIKYEV--GLPTLCCLKLAFLDPDTGKLTGGSFT 1031
Query: 1532 LTLPEVTGFPDFLVERTRFDAAIQRNWTCRDKCK-----VWWKN--ESDEDGSWWDGRVL 1584
+ ++ DFLV R +FD A R W D+ + WW ES E +
Sbjct: 1032 MKYHDMPDVIDFLVLRQQFDDAKHRRWNIGDRFRSVIDDAWWFGTIESQEP-------LQ 1084
Query: 1585 SVKPKSS-EFPDSPWERYTVQYKTEPTETHLHSPWELFDSDTQWEQPRIDDDNRNKLLSA 1643
P S + + W+ + K P + L +F + P D++ R L
Sbjct: 1085 PDYPDSLFQCYNVCWDNGDTE-KMSPWDMELIPTNAVFPEELGTSVPLTDEERRTLLYKP 1143
Query: 1644 FAKLEQSANRVQ--DQY--GVQKLKQVSQKTNFT-----NRFPV-------PLSLDVIQS 1687
S R Q D+ G+ +L + + F +P+ P L I+
Sbjct: 1144 LDGEWGSRTRDQECDRIIAGINQLMTLDIASAFVAPVDLQAYPMYCTVVAYPTDLSTIKQ 1203
Query: 1688 RLENNYYRGLEAVKHDIAVMLSNAESYFGRNTDLSTKIKRLSDLVTRTLSSLKAPQFHDV 1747
RLE+ +YR L ++ ++ + N ++ + + K ++DL+ L +K +D+
Sbjct: 1204 RLESRFYRRLSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLL---LHFIKDQSCYDI 1260
Score = 71 (30.1 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 22/81 (27%), Positives = 35/81 (43%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V + + R + DC + +W DG L+ +L GH + V+ N IA AG
Sbjct: 176 VYCVTFDRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTMIA--AG 233
Query: 603 YDGKTI-VWDIWEGIPIRIYE 622
K I VW + P+ + +
Sbjct: 234 SCDKMIRVWCLRTCAPLAVLQ 254
Score = 61 (26.5 bits), Expect = 3.2e-33, Sum P(3) = 3.2e-33
Identities = 27/114 (23%), Positives = 53/114 (46%)
Query: 928 SEESGRSLLNEQRKHSKGKGISLDDSEDVTKLDTPESHVNAGIR-----RLVLKLPVRDS 982
SEE + +++ ++ +K S + S D LDT +S + R ++ P R +
Sbjct: 743 SEEKRKHVMSHIQRENKIPTFSKNHSHDHL-LDTNDSRKQQANQHNYRTRYAVEEPARPA 801
Query: 983 NKHELQERTSDKCNQLVSVIGTSSEAHQEATEGNGNRVSYVGNNCSSVDANCGL 1036
+ E +SD+ ++V G +SE + A +G+ Y ++ S A+ G+
Sbjct: 802 EELENGHSSSDE-GEVVVASGGTSEDDERAWHSDGSSSDY-SSDYSDWTADAGI 853
Score = 58 (25.5 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 251 FDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDI 288
+DR VIT ++ +K+W+ T + GHE ++
Sbjct: 422 WDRHDNSVITAVNNMTLKVWNSFTGQLIHILMGHEDEV 459
Score = 54 (24.1 bits), Expect = 1.6e-27, Sum P(3) = 1.6e-27
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 1679 PLSLDVIQSRLE-NNYYRGLEAVKHDIAVMLSNAESYF-GRNTDLSTKIKRLSDLVTRTL 1736
P+ ++ LE NY +E K D+ ++ SN+++Y + + + + RLS +
Sbjct: 1353 PMDFATVRETLEAGNYESPMELCK-DVRLIFSNSKAYTPSKRSRIYSMSLRLSAFFEEHI 1411
Query: 1737 SSL 1739
SS+
Sbjct: 1412 SSI 1414
Score = 47 (21.6 bits), Expect = 5.3e-24, Sum P(4) = 5.3e-24
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 931 SGRSLLNEQRKHSKGKGI 948
SG+S+L KHSK + I
Sbjct: 1535 SGKSVLENSTKHSKNQNI 1552
Score = 46 (21.3 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSME 273
+ I + H + V F S ++GS D +IW +
Sbjct: 346 EKISELEFHTDKVDSIQFSNSSSRFVSGSRDGTARIWQFK 385
Score = 43 (20.2 bits), Expect = 2.3e-31, Sum P(3) = 2.3e-31
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 809 SEDGENPMDGLRRSKRKKQKAEVEIMTSSGRRVKRRILDESEGNAAFG 856
SED E P ++ K++++K E S KR+ + + A G
Sbjct: 873 SEDEEGPEKQKKQIKKERKKGSEEKDGPSTSPKKRKPKERKQKRLAVG 920
Score = 40 (19.1 bits), Expect = 4.4e-26, Sum P(3) = 4.4e-26
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 1200 EILTPVSTKLRIRSKRILRDADVE 1223
++L P + K++ RS+R D +E
Sbjct: 1727 DLLIPANVKMQTRSRRKKIDEPME 1750
Score = 40 (19.1 bits), Expect = 1.1e-23, Sum P(4) = 1.1e-23
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 820 RRSKRKKQKAEVEIMTSSGRRVKRRIL 846
RR K++ + + V +S KRR++
Sbjct: 1432 RRRKKRSRSSSVSSSVASSPERKRRLI 1458
Score = 39 (18.8 bits), Expect = 6.0e-31, Sum P(3) = 6.0e-31
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 808 DSEDGENPMDGLRRSKRKKQKA-EVEIMTSSG 838
+ +DG + R+ K +KQK V ++ +G
Sbjct: 895 EEKDGPSTSPKKRKPKERKQKRLAVGVLAENG 926
>ZFIN|ZDB-GENE-041111-120 [details] [associations]
symbol:brwd1 "bromodomain and WD repeat domain
containing 1" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 ZFIN:ZDB-GENE-041111-120 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR011047
SUPFAM:SSF50998 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 EMBL:BX088654
EMBL:CT573306 IPI:IPI00898300 Ensembl:ENSDART00000115034
Uniprot:E7F145
Length = 2008
Score = 326 (119.8 bits), Expect = 2.9e-45, Sum P(5) = 2.9e-45
Identities = 118/436 (27%), Positives = 184/436 (42%)
Query: 306 DCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFS 365
D ++++W DG S LRGH A ++ +A + + + S D T R+W R +
Sbjct: 32 DALVKIWSSFDGRLHSTLRGHYAEISDLAVNFENTLI---AAGSCDKTIRVWCLRTC--A 86
Query: 366 PRIYIPRPSDAVAGRNMAP---SS-----SAGPQSHQIFCCAFNANGTVFVTGSSDTLAR 417
P + S ++ +P S S G + F ++ N F SD +
Sbjct: 87 PVAVLQGHSGSITSLQFSPFVKGSKRYMVSTGTDATVCFW-QWDVNNNEF----SDRQHK 141
Query: 418 VWNACKPNTD---DSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTPKF 474
+P S P + +G +DV + + G + + DS T K
Sbjct: 142 FTERPRPGVQTVCSSFSPGGMF-LATGSTDDVIRIYYLGSGSPEKLAELDSH----TDKV 196
Query: 475 KNSWFCH--DNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVXXXXXXXXXXXXXX 532
+ FCH + V+ SRDG+A IW R + H +W L +
Sbjct: 197 DSIQFCHSGERFVSGSRDGTARIW--RLHQRH----QWKSVL-LDMSATLPGSAPLTDDE 249
Query: 533 XXXILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHP 592
P+ V M+ W + V+ A+ + + VWN+ G L+H L GH +VL+ HP
Sbjct: 250 NFF---KPK-VTMVSWDRHDNTVITAVNNHLLKVWNSYTGQLLHVLKGHEAEVFVLEPHP 305
Query: 593 FNPRIAMSAGYDGKTIVWDIWEGIPIR-------------IYEISRFRDGASIILSDDVG 639
++PRI +SAG+DG VWD+ +G +++ DG ++D G
Sbjct: 306 YDPRIMLSAGHDGNVFVWDLIKGTKTMHYFNMIEGQGHGAVFDCKFTPDGHRFAMTDSHG 365
Query: 640 QLYILNTGQGESQKDAKYDQFFLGDYRPLVQDTYGNVLDQETQLAPHRRNLQDP--LCDS 697
L I G + + FF DYRPL++DT G VLD++TQ APH L P L D
Sbjct: 366 HLVIFGFGSSKPYEKLPDQVFFHTDYRPLIRDTNGFVLDEQTQQAPH---LMPPPFLVDV 422
Query: 698 AMIPYPEPYQTMYQQR 713
P+P +Q + R
Sbjct: 423 DGNPHPPRFQRLVPGR 438
Score = 264 (98.0 bits), Expect = 2.9e-45, Sum P(5) = 2.9e-45
Identities = 86/325 (26%), Positives = 144/325 (44%)
Query: 1319 SEGDGGGVGESTLNAN---NNNFHESATDGSRRTRSMGLKTTTCDPDNVSSNLRLEQHNQ 1375
SE +G + S + +++ S++D S T G+ T D + R+ ++
Sbjct: 658 SEVEGSDIDSSAEDEEEWKSDSSSRSSSDYSDWTADAGISVRTSDSSRRRTTRRISS-SE 716
Query: 1376 PEDMYSGHNRSTSRCQLPH--EEWGSSSKMTVGLRSTRNRRTSYLFCDSSPIDRRKTHQS 1433
ED + P EE SS + +S + + P R+
Sbjct: 717 EEDEEDDEEEEEPADEEPAVGEEETSSPRKHKKAKSKTPKHSK-----PRPSINREISNE 771
Query: 1434 LRKGSWLMLSTHEEGSRYIPQLGDEVVYLRQGHQEYIN-------YSGSREVGPWITVKG 1486
R +W+ S ++PQ+GDEV+Y RQGH+ Y++ Y + + PW K
Sbjct: 772 FRPPAWIT-DVVPRKSPFVPQMGDEVIYFRQGHEAYVDAVCRMNLYPINLDKQPW--KKM 828
Query: 1487 NIRAVEFCKVESLEYATASGSGDSCCKMTLKFIDP-TSSVSNMTFRLTLPEVTGFPDFLV 1545
+R EF K+ ++Y + CC + L IDP T +++ TF + ++ DFLV
Sbjct: 829 QLRDQEFVKITGIKYEVCPPT--LCC-LKLTQIDPGTGKITDRTFSIKYHDMADVIDFLV 885
Query: 1546 ERTRFDAAIQRNWTCRDKCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQY 1605
R +D A R WT D+ + S D +WW G ++ +P SE+PDS ++ + V++
Sbjct: 886 LRQSYDEARNRVWTSNDRFR------SVIDDAWWFGAIVCHEPYQSEYPDSHFQCFKVKW 939
Query: 1606 KTEPTETHLHSPWELFDSDTQWEQP 1630
+ ET SPW++ EQP
Sbjct: 940 --DNGETEKLSPWDVEAIPENAEQP 962
Score = 260 (96.6 bits), Expect = 2.7e-38, Sum P(5) = 2.7e-38
Identities = 65/192 (33%), Positives = 95/192 (49%)
Query: 233 MQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
M+ +R+ GH +AVYC FDR+G + TGSDD LVKIWS ++ RGH +I+D
Sbjct: 1 MKMHRRILGHLSAVYCIAFDRTGSRIFTGSDDALVKIWSSFDGRLHSTLRGHYAEISDLA 60
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPR-PGSVYQLLSSSDD 351
D IRVW L P++VL+GH+ ++T++ FSP GS ++S+ D
Sbjct: 61 VNFENTLIAAGSCDKTIRVWCLRTCAPVAVLQGHSGSITSLQFSPFVKGSKRYMVSTGTD 120
Query: 352 GTCRIW--DARYSQFSPRI--YIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVF 407
T W D ++FS R + RP V Q C +F+ G
Sbjct: 121 ATVCFWQWDVNNNEFSDRQHKFTERPRPGV----------------QTVCSSFSPGGMFL 164
Query: 408 VTGSSDTLARVW 419
TGS+D + R++
Sbjct: 165 ATGSTDDVIRIY 176
Score = 142 (55.0 bits), Expect = 5.9e-31, Sum P(4) = 5.9e-31
Identities = 61/285 (21%), Positives = 114/285 (40%)
Query: 1480 PWITVKGNIRAVEFCKVESLEYATASGSGDSCCKMTLKFIDPTSSVSNMTFRLTLPEVTG 1539
PW K +R EF K+ ++Y + CC + T +++ TF + ++
Sbjct: 824 PW--KKMQLRDQEFVKITGIKYEVCPPT--LCCLKLTQIDPGTGKITDRTFSIKYHDMAD 879
Query: 1540 FPDFLVERTRFDAAIQRNWTCRDKCK-----VWWKN----ESDEDGSWWDG--RVLSVKP 1588
DFLV R +D A R WT D+ + WW + D + VK
Sbjct: 880 VIDFLVLRQSYDEARNRVWTSNDRFRSVIDDAWWFGAIVCHEPYQSEYPDSHFQCFKVKW 939
Query: 1589 KSSEFPD-SPWERYTVQYKTE-PTETHLHSPW---ELFDSDTQWEQPRIDDDNRNKLLSA 1643
+ E SPW+ + E P P E+ D + ++ D R + +
Sbjct: 940 DNGETEKLSPWDVEAIPENAEQPESASAGVPVTDEEMMDILYKPQRGEWGDRGREQESAR 999
Query: 1644 F-AKLEQSANRVQDQYGVQKLKQVSQKTNFTNRFPVPLSLDVIQSRLENNYYRGLEAVKH 1702
A +EQ V ++Q + P L+ I+ RL++N+YR L A+
Sbjct: 1000 IIAGIEQLMT-VDITAPFSGPVDLTQYPTYCTVIAYPTDLNTIKLRLKHNFYRRLSALIW 1058
Query: 1703 DIAVMLSNAESYFGRNTDLSTKIKRLSDLVTRTLSSLKAPQFHDV 1747
D+ + NA+++ + ++ K +++++ + +S L ++
Sbjct: 1059 DVKHIEQNAKTFNEPRSKIAQSAKIITNVLIKFISKLHCTDIMEI 1103
Score = 71 (30.1 bits), Expect = 3.7e-19, Sum P(5) = 3.7e-19
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 251 FDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDI 288
+DR VIT ++ L+K+W+ T L +GHE ++
Sbjct: 261 WDRHDNTVITAVNNHLLKVWNSYTGQLLHVLKGHEAEV 298
Score = 70 (29.7 bits), Expect = 4.6e-19, Sum P(5) = 4.6e-19
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWNA 421
++C AF+ G+ TGS D L ++W++
Sbjct: 14 VYCIAFDRTGSRIFTGSDDALVKIWSS 40
Score = 69 (29.3 bits), Expect = 3.4e-24, Sum P(3) = 3.4e-24
Identities = 59/256 (23%), Positives = 99/256 (38%)
Query: 1121 EEITNCGDNTDE--VPLKNVKNLSGE--------NNDVYSGDASCKEQQSGF-SELNYYD 1169
E+ N D+ D+ VP KN +N S ++D S ++ K + SE D
Sbjct: 1711 EDEENQSDDADQRRVP-KN-RNRSSNARKQKLCASSDESSSESDEKADRGRIKSEGTSSD 1768
Query: 1170 ESKCVNTTDEDTTPYPNHLQNGTIQPSELKEILTPVSTKLRIRSKRILRDADVE------ 1223
E + +T++ED +P T+ VS + R + I+ D++ E
Sbjct: 1769 EWQKSDTSEEDKKTHPQRKPCPTVASKG-------VSLRTRPKKNYIMEDSEEEFSPKMD 1821
Query: 1224 -NQNNGCDALHGSSLDIKPNSLPEVLESDGTNRTSSD----RGADGSQRLNAQIDSTSEH 1278
NG +S KP+ + G++ + +D R +DG++ AQ S
Sbjct: 1822 VQAKNGVKNQQANSRTRKPSGGGFKRKHGGSSESDADSKSSRSSDGNKLAEAQRKSAKRF 1881
Query: 1279 DPLGSHSHSHDPLGSHSHSHSRKMFNVVYRRSKTNRDRTN-SEGDGGGVGESTLNANNNN 1337
L + S + S + + + +R R SE D G N N +N
Sbjct: 1882 KQLMGSTDSESDFETRCKSENGRAQRSQGKLPTVSRQRRKQSESDKGS------NDNGSN 1935
Query: 1338 FH--ESATDGSRRTRS 1351
F ES ++ S +RS
Sbjct: 1936 FESEESESEASSGSRS 1951
Score = 66 (28.3 bits), Expect = 2.9e-45, Sum P(5) = 2.9e-45
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 1667 SQKTNFTNRFPVPLSLDVIQSRLENNYYRGLEAVKHDIAVMLSNAESYF-GRNTDLSTKI 1725
S ++TN P+ L ++ LE + Y V DI ++ +NA++Y + + + +
Sbjct: 1173 SDYPDYTNIIDTPMDLGTVRQTLEEDRYENPIDVCKDIRLIFANAKAYTPNKRSKIYSMT 1232
Query: 1726 KRLS 1729
RLS
Sbjct: 1233 LRLS 1236
Score = 59 (25.8 bits), Expect = 3.6e-23, Sum P(3) = 3.6e-23
Identities = 33/187 (17%), Positives = 60/187 (32%)
Query: 1230 DALHGSSLDIKPNSLPEVLESDGTNRTSSDRGADGSQRLNAQIDSTSEHDPLGSHSHSHD 1289
D H SS + N+ + R + ++N + S P S H+
Sbjct: 1347 DDEHSSSSRAMRRETRATRKKAAQNKGAKSRRPESHVKMNGRSRSHERQKPRTSSDSDHE 1406
Query: 1290 PLGSHSHSHSRKMFNVVYRRSKTNRDRTNSEG-----DGGGVGESTLNANNNNFHESATD 1344
P + + V RR +T + + D G E T + AT
Sbjct: 1407 PSQGSDEASENESSPSVSRRPRTRKTAMAAVNKMKLIDTLGDEEGTDDEGGGGSTRPATR 1466
Query: 1345 GSRRTRSMGLKTTTCDPDNVSSNLRLEQHNQPEDMYSGHNRSTSRCQLPHEEWGSSSKMT 1404
S+R+ + + + D + +++ E+ N+ S +S + T
Sbjct: 1467 ASKRSAVIQSSSDSDDEEEAAASQ--EESNESGSSASEGEKSAGSADSDSSSHSKKNSRT 1524
Query: 1405 VGLRSTR 1411
G R R
Sbjct: 1525 AGRRPCR 1531
Score = 50 (22.7 bits), Expect = 3.1e-22, Sum P(3) = 3.1e-22
Identities = 47/245 (19%), Positives = 84/245 (34%)
Query: 1080 EMMPLDANNGSGIHLDDDKEKESEVNGHVKPE--KDGIDISCGEEITNCGDNTDEVPLKN 1137
E PL +G+ ++ + + ++ E + D+ + T +K
Sbjct: 1538 ETSPLTNGHGTKRQWEESDDNSEDGGSPIESENLESDNDLVVRRKSTRRTAKAAVSKIKK 1597
Query: 1138 VKNLSGENNDVYSGDASCKEQQSGFSELNYYDESKCVNTTDEDTTPYPNHLQNGT-IQPS 1196
+ N E + + D K + N DE V TT T +P+ QNG +
Sbjct: 1598 INNTDAEEEENCTRDRRQKHRSITQESENSSDEE--VETTK--TLKHPH--QNGRKVDAK 1651
Query: 1197 ELKEILTPVSTKLRIRSKRILRDADVENQNNGCDALHGSSLDIKPNSLPEVLESDGTNRT 1256
ELK P R + +++ DA ++ D + L + +E T+R
Sbjct: 1652 ELKRCKAPSE---RQEQSPAAKQKTTHKKSSATDACMSTTQDSE--ELSDDVEKSVTHRK 1706
Query: 1257 SSDRGADGSQRLNAQIDSTSEHDPLGSHSHSHDPLGSHSHSHSRKMFNVVYRRSKTNRDR 1316
+ +Q +A ++ S++ S S S K +R R
Sbjct: 1707 RIASEDEENQSDDADQRRVPKNRNRSSNARKQKLCASSDESSSES-------DEKADRGR 1759
Query: 1317 TNSEG 1321
SEG
Sbjct: 1760 IKSEG 1764
Score = 49 (22.3 bits), Expect = 4.9e-22, Sum P(3) = 4.9e-22
Identities = 12/52 (23%), Positives = 27/52 (51%)
Query: 808 DSEDGENPMDGLRRSKRKKQKAEVEIMTSSGRRVKRRILDESEGNAAFGNKR 859
+SE+ E+ RS K++ + + T+ R+ RR++ + + + +F R
Sbjct: 1937 ESEESESEASSGSRSSPKRRLRDRDRGTARSRK-PRRVVSDDDSDVSFEKPR 1987
Score = 48 (22.0 bits), Expect = 1.2e-21, Sum P(4) = 1.2e-21
Identities = 21/85 (24%), Positives = 34/85 (40%)
Query: 932 GRSLLNEQRKHSKGKGISLDDSEDVTKLDTPESHVNAGIRRLVLKLPVRDSNKHELQERT 991
G L QRK +K + ++ + +T N +R KLP + + E
Sbjct: 1867 GNKLAEAQRKSAKRFKQLMGSTDSESDFETRCKSENGRAQRSQGKLPTVSRQRRKQSE-- 1924
Query: 992 SDKCNQLVSVIGTSSEAHQEATEGN 1016
SDK + S E+ EA+ G+
Sbjct: 1925 SDKGSNDNGSNFESEESESEASSGS 1949
Score = 48 (22.0 bits), Expect = 7.1e-17, Sum P(5) = 7.1e-17
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSM 272
+ + + H + V F SG ++GS D +IW +
Sbjct: 184 EKLAELDSHTDKVDSIQFCHSGERFVSGSRDGTARIWRL 222
Score = 47 (21.6 bits), Expect = 1.2e-21, Sum P(4) = 1.2e-21
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 808 DSEDGENP-MDGLRRSKRKKQKAEVEIMTSSGRRVKRRILDESEGNAAFGNKRT 860
DSE+ +P MD ++ K Q+A SG KR+ SE +A + R+
Sbjct: 1811 DSEEEFSPKMDVQAKNGVKNQQANSRTRKPSGGGFKRKHGGSSESDADSKSSRS 1864
Score = 45 (20.9 bits), Expect = 1.3e-21, Sum P(3) = 1.3e-21
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 808 DSEDGENPMDGLRRSKRKKQKAEVEIMTSSGRRVKRRILDESEGNA 853
+S+ G N +G S + +++E E + S KRR+ D G A
Sbjct: 1924 ESDKGSND-NG---SNFESEESESEASSGSRSSPKRRLRDRDRGTA 1965
Score = 43 (20.2 bits), Expect = 2.9e-45, Sum P(5) = 2.9e-45
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 1223 ENQNNGCDALHGSSLDIKPNSLPEVLESDGTNRTSSD 1259
E ++ + GS +D E +SD ++R+SSD
Sbjct: 651 ETASSEASEVEGSDIDSSAED-EEEWKSDSSSRSSSD 686
Score = 40 (19.1 bits), Expect = 2.9e-45, Sum P(5) = 2.9e-45
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 948 ISLDDSEDVTKLDTPESHVNAGIRRLVLKLPVRDSNKHELQERTS 992
++ D E V ++ + +S + +R L +R +H Q+R S
Sbjct: 453 VATSDGEVVEQVISQQSAESEEVRHSALDFAIRQLREH--QDRQS 495
Score = 40 (19.1 bits), Expect = 4.4e-16, Sum P(5) = 4.4e-16
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 103 DGMSFPLSYNKLVERYPHIEKDHLVKLL 130
DG P + +LV +I +HLV L
Sbjct: 423 DGNPHPPRFQRLVPGRENIADEHLVPQL 450
Score = 39 (18.8 bits), Expect = 8.7e-24, Sum P(3) = 8.7e-24
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 704 EPYQTMYQQRRLGALGIEW 722
EPYQ+ Y ++W
Sbjct: 921 EPYQSEYPDSHFQCFKVKW 939
>UNIPROTKB|F1MPF7 [details] [associations]
symbol:PHIP "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0040008
"regulation of growth" evidence=IEA] [GO:0033138 "positive
regulation of peptidyl-serine phosphorylation" evidence=IEA]
[GO:0022604 "regulation of cell morphogenesis" evidence=IEA]
[GO:0010800 "positive regulation of peptidyl-threonine
phosphorylation" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEA] [GO:0008284 "positive regulation
of cell proliferation" evidence=IEA] [GO:0007010 "cytoskeleton
organization" evidence=IEA] [GO:0006606 "protein import into
nucleus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 GO:GO:0005634 GO:GO:0008286 GO:GO:0007010
GO:GO:0043066 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008284 GO:GO:0045944 GO:GO:0010800 GO:GO:0006606
GO:GO:0040008 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0033138
GO:GO:0022604 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 OMA:PGTIQVN
EMBL:DAAA02025391 IPI:IPI00686987 Ensembl:ENSBTAT00000034372
Uniprot:F1MPF7
Length = 1759
Score = 351 (128.6 bits), Expect = 3.0e-45, Sum P(3) = 3.0e-45
Identities = 131/484 (27%), Positives = 207/484 (42%)
Query: 306 DCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFS 365
DC++++W DG ++ LRGH A ++ +A + + + S D R+W R +
Sbjct: 141 DCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTMI---AAGSCDKMIRVWCLRTC--A 195
Query: 366 PRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTV-FVTGSSDTL------ARV 418
P + S ++ +P S + + + A+GT+ F + TL A+
Sbjct: 196 PLAVLQGHSASITSLQFSPLCSGSKR----YLSSTGADGTICFWLWDAGTLKINPRPAKF 251
Query: 419 WNACKPNTDD--SDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLAD--SSKEDSTPKF 474
+P S + + +G + + V F G + S + + K DS +F
Sbjct: 252 TERPRPGVQMICSSFSAGGMFLATGSTDHIIRVYFFGSGQPEKISELEFHTDKVDSI-QF 310
Query: 475 KNSWFCHDNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVXXXXXXXXXXXXXXXX 534
N+ + V+ SRDG+A IW + R W + +
Sbjct: 311 SNT---SNRFVSGSRDGTARIWQFKRRE-------WKS---ILLDMATRPAGQNLQGIED 357
Query: 535 XILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFN 594
I T V M+ W + V+ A+ + + VWN+ G L+H L GH + +VL+ HPF+
Sbjct: 358 KI--TKMKVTMVAWDRHDNTVITAVNNMTLKVWNSYTGQLIHVLMGHEDEVFVLEPHPFD 415
Query: 595 PRIAMSAGYDGKTIVWDIWEGIPIR-------------IYEISRFRDGASIILSDDVGQL 641
PR+ SAG+DG IVWD+ G+ IR +++ DG +D G L
Sbjct: 416 PRVLFSAGHDGNVIVWDLARGVKIRSYFNMIEGQGHGAVFDCKCSPDGQHFACTDSHGHL 475
Query: 642 YILNTGQGESQKDAKYDQ-FFLGDYRPLVQDTYGNVLDQETQLAPHRRNLQDP--LCDSA 698
I G S+ D DQ FF DYRPL++D VLD++TQ APH L P L D
Sbjct: 476 LIFGFGSS-SKYDKIADQMFFHSDYRPLIRDANNFVLDEQTQQAPH---LMPPPFLVDVD 531
Query: 699 MIPYPEPYQTMYQQRRLGALGIEWRPSSLKLAVGPDFSLDQGYQLQPLADLDVMIDPLPE 758
P+P YQ + R + P + G + L Q Q ++ LD MI L +
Sbjct: 532 GNPHPSRYQRLVPGRE-NCREEQLIPQMGVTSSGLNQVLSQQAN-QDISPLDSMIQRLQQ 589
Query: 759 FIDV 762
D+
Sbjct: 590 EQDL 593
Score = 311 (114.5 bits), Expect = 5.7e-41, Sum P(3) = 5.7e-41
Identities = 75/199 (37%), Positives = 108/199 (54%)
Query: 226 PSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHE 285
P+ + Q M+ KR+ GH ++VYC FDR+GR + TGSDD LVKIW+ + LA+ RGH
Sbjct: 103 PTAVYQHMKMHKRILGHLSSVYCVTFDRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHA 162
Query: 286 GDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPR-PGSVYQ 344
+I+D D +IRVW L P++VL+GH+A++T++ FSP GS
Sbjct: 163 AEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPLAVLQGHSASITSLQFSPLCSGSKRY 222
Query: 345 LLSSSDDGT-CR-IWDARYSQFSPRI--YIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAF 400
L S+ DGT C +WDA + +PR + RP V Q+ C +F
Sbjct: 223 LSSTGADGTICFWLWDAGTLKINPRPAKFTERPRPGV----------------QMICSSF 266
Query: 401 NANGTVFVTGSSDTLARVW 419
+A G TGS+D + RV+
Sbjct: 267 SAGGMFLATGSTDHIIRVY 285
Score = 293 (108.2 bits), Expect = 4.7e-39, Sum P(3) = 4.7e-39
Identities = 98/294 (33%), Positives = 144/294 (48%)
Query: 115 VERYPHIEKDHLVKLLKQLIINTSSPSRAMIGGDAPNAAD-VPTLLGRGSFSLLSYDRD- 172
V+ Y H+ DHL+++ +L P ++ + P + V TLLG G SLL ++
Sbjct: 1 VKYYRHLAPDHLLQICHRL-----GP---LLEQEIPQSVPGVQTLLGAGRQSLLRTNKSC 52
Query: 173 -----KGQN----EIDHPP-AHMRW--PHMYADQVRGLGLREIGGGFTRHHRAPSIRAAC 220
KG PP + + + P AD L R++ G + P+ A
Sbjct: 53 KHVVWKGSALAALHCGRPPESPINYGSPPSIADT---LFSRKLNGKYRLERLVPT---AV 106
Query: 221 YAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLAS 280
Y Q M+ KR+ GH ++VYC FDR+GR + TGSDD LVKIW+ + LA+
Sbjct: 107 Y---------QHMKMHKRILGHLSSVYCVTFDRTGRRIFTGSDDCLVKIWATDDGRLLAT 157
Query: 281 CRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPR-P 339
RGH +I+D D +IRVW L P++VL+GH+A++T++ FSP
Sbjct: 158 LRGHAAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPLAVLQGHSASITSLQFSPLCS 217
Query: 340 GSVYQLLSSSDDGT-CR-IWDARYSQFSPRI--YIPRPSDAVAGRNMAPSSSAG 389
GS L S+ DGT C +WDA + +PR + RP V + + S SAG
Sbjct: 218 GSKRYLSSTGADGTICFWLWDAGTLKINPRPAKFTERPRPGV--QMICSSFSAG 269
Score = 230 (86.0 bits), Expect = 3.0e-45, Sum P(3) = 3.0e-45
Identities = 93/364 (25%), Positives = 150/364 (41%)
Query: 1283 SHSHSHD-PLG------SHSHSH-SRKMFNVVYRRSKTNRDRTNS--EGDGGGVGESTLN 1332
+H+H H LG ++ H++ +R R S+ + T+S EG+ V T
Sbjct: 711 NHAHEHFVDLGESKKQQANQHNYRTRSALEETPRPSEEIENGTSSSDEGEVVAVSGGTSE 770
Query: 1333 ANNNNFHESATDGSRRTRSMGLKTTTCDPD-NVSSNLRLEQHNQPEDMYSGHNRSTSRCQ 1391
+H +DGS S T D N+ ++ +H + S S Q
Sbjct: 771 EEERAWH---SDGSSSDYSSDYSDWTADAGINLQPPKKIPKHKTKKAESSSDEEEESEKQ 827
Query: 1392 LPHEEWGSSSKMTV---GLRSTRNRRTSYLFCDSSPIDRRKTHQSLRKGSWL----MLST 1444
+ K+ G S + ++ + T L WL + T
Sbjct: 828 KQKQIKKDRKKINEEKDGPVSPKKKKPKERKQKRLAVGEL-TENGLTLEEWLPSTWITDT 886
Query: 1445 HEEGSRYIPQLGDEVVYLRQGHQEYIN-------YSGSREVGPWITVKGNIRAVEFCKVE 1497
++PQ+GDEV Y RQGH+ Y+ YS + + PW K +R E K+
Sbjct: 887 LPRRCPFVPQMGDEVYYFRQGHEAYVEMARKNKIYSINPKKQPWH--KMELREQELMKIV 944
Query: 1498 SLEYATASGSGDSCCKMTLKFIDP-TSSVSNMTFRLTLPEVTGFPDFLVERTRFDAAIQR 1556
++Y G CC + L F+DP T ++ +F + ++ DFLV R +F+ A R
Sbjct: 945 GIKYEV--GLPTLCC-LKLAFLDPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFEDAKYR 1001
Query: 1557 NWTCRDKCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPTETHLHS 1616
W D+ + S D +WW G + S +P E+PDS ++ Y V + TE S
Sbjct: 1002 RWNIGDRFR------SVIDDAWWFGTIESQEPLQPEYPDSLFQCYNVCWDNGDTEKM--S 1053
Query: 1617 PWEL 1620
PW++
Sbjct: 1054 PWDM 1057
Score = 100 (40.3 bits), Expect = 4.5e-30, Sum P(3) = 4.5e-30
Identities = 68/309 (22%), Positives = 123/309 (39%)
Query: 1451 YIPQLGDEVVYLRQGHQEYINYSGSREVGPWITVKGNIRAVEFCKVESLEYATASGSGDS 1510
Y Q G E Y+ + I YS + + PW K +R E K+ ++Y G
Sbjct: 903 YFRQ-GHEA-YVEMARKNKI-YSINPKKQPWH--KMELREQELMKIVGIKYEV--GLPTL 955
Query: 1511 CCKMTLKFIDPTSSVSNMTFRLTLPEVTGFPDFLVERTRFDAAIQRNWTCRDKCK----- 1565
CC T ++ +F + ++ DFLV R +F+ A R W D+ +
Sbjct: 956 CCLKLAFLDPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFEDAKYRRWNIGDRFRSVIDD 1015
Query: 1566 VWWKN--ESDE-------DGSW------WD-GRVLSVKPKSSEF-PDS---PWERYTVQY 1605
WW ES E D + WD G + P E P++ P E T
Sbjct: 1016 AWWFGTIESQEPLQPEYPDSLFQCYNVCWDNGDTEKMSPWDMELIPNNAVFPEELGTSVP 1075
Query: 1606 KTE-PTETHLHSPWELFDSDTQW-EQPRIDDDNRNKLLSAFAKLEQSANRVQDQYGVQKL 1663
T+ T + ++ P D +W PR D+ ++++ +L + + + + V +
Sbjct: 1076 LTDVETRSLIYKPL-----DGEWGSNPR--DEECERIVTGINQL-MTLD-IASAF-VAPV 1125
Query: 1664 KQVSQKTNFTNRFPVPLSLDVIQSRLENNYYRGLEAVKHDIAVMLSNAESYFGRNTDLST 1723
+ + P L I+ RLEN +YR + ++ ++ + N ++ + +
Sbjct: 1126 -DLQAYPMYCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEPGSPIVK 1184
Query: 1724 KIKRLSDLV 1732
K ++DL+
Sbjct: 1185 SAKFVTDLL 1193
Score = 71 (30.1 bits), Expect = 5.9e-16, Sum P(3) = 5.9e-16
Identities = 22/81 (27%), Positives = 35/81 (43%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V + + R + DC + +W DG L+ +L GH + V+ N IA AG
Sbjct: 123 VYCVTFDRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTMIA--AG 180
Query: 603 YDGKTI-VWDIWEGIPIRIYE 622
K I VW + P+ + +
Sbjct: 181 SCDKMIRVWCLRTCAPLAVLQ 201
Score = 60 (26.2 bits), Expect = 7.8e-15, Sum P(3) = 7.8e-15
Identities = 14/57 (24%), Positives = 27/57 (47%)
Query: 234 QNIKRVRGH--RNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDI 288
QN++ + + V +DR VIT ++ +K+W+ T + GHE ++
Sbjct: 350 QNLQGIEDKITKMKVTMVAWDRHDNTVITAVNNMTLKVWNSYTGQLIHVLMGHEDEV 406
Score = 54 (24.1 bits), Expect = 3.0e-45, Sum P(3) = 3.0e-45
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 1679 PLSLDVIQSRLE-NNYYRGLEAVKHDIAVMLSNAESYF-GRNTDLSTKIKRLS----DLV 1732
P+ ++ LE NY +E K D+ ++ SN+++Y + + + + RLS + +
Sbjct: 1298 PMDFATVRETLEAGNYESPMELCK-DVRLIFSNSKAYTPSKRSRIYSMSLRLSAFFEEHI 1356
Query: 1733 TRTLSSLK-APQFH 1745
+ LS K A +FH
Sbjct: 1357 SSVLSDYKSALRFH 1370
Score = 50 (22.7 bits), Expect = 2.6e-22, Sum P(3) = 2.6e-22
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 653 KDAKYDQFFLGD-YRPLVQDT--YGNVLDQE 680
+DAKY ++ +GD +R ++ D +G + QE
Sbjct: 996 EDAKYRRWNIGDRFRSVIDDAWWFGTIESQE 1026
Score = 44 (20.5 bits), Expect = 3.3e-13, Sum P(3) = 3.3e-13
Identities = 9/40 (22%), Positives = 17/40 (42%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSME 273
+ I + H + V F + ++GS D +IW +
Sbjct: 293 EKISELEFHTDKVDSIQFSNTSNRFVSGSRDGTARIWQFK 332
Score = 41 (19.5 bits), Expect = 6.8e-44, Sum P(3) = 6.8e-44
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 1719 TDLSTKIKRLSDLVTRTLSSL 1739
TDLST +RL + R +SSL
Sbjct: 1141 TDLSTIKQRLENRFYRRVSSL 1161
Score = 39 (18.8 bits), Expect = 9.1e-24, Sum P(3) = 9.1e-24
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 1200 EILTPVSTKLRIRSKRILRDADVENQNNGCDALHGS 1235
+++ P S K+ RS R D D ++ + L GS
Sbjct: 1666 DLIVPTSVKMLRRSNRKKTD-DPMDEEEEFEELKGS 1700
Score = 38 (18.4 bits), Expect = 4.5e-30, Sum P(3) = 4.5e-30
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 1056 NGYKDGKI--RWGGVRARSSKRLKIGEM 1081
N KDG + + + R KRL +GE+
Sbjct: 840 NEEKDGPVSPKKKKPKERKQKRLAVGEL 867
Score = 38 (18.4 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 15/68 (22%), Positives = 25/68 (36%)
Query: 1253 TNRTSSDRGADGSQRLNAQIDSTSEHDPLGSHSHSHDPLGSHSHSHSRKMFNVVYRRSKT 1312
T + SD S ++ + + DP+ + GS H +R N R +
Sbjct: 1660 TQKLDSDLIVPTSVKMLRRSNRKKTDDPMDEEEEFEELKGSEPHMRTR---NQGRRTAFY 1716
Query: 1313 NRDRTNSE 1320
N D + E
Sbjct: 1717 NEDDSEEE 1724
Score = 37 (18.1 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 820 RRSKRKKQKAEVEIMTSSGRRVKRRIL 846
RR KR + + SS R K+RIL
Sbjct: 1378 RRRKRNRSSSVSSSAASSPER-KKRIL 1403
>UNIPROTKB|F1N8L6 [details] [associations]
symbol:BRWD3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0008360 "regulation of cell shape" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 GO:GO:0007010 Gene3D:2.130.10.10 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00700000104382
OMA:MTGNNLP InterPro:IPR011044 SUPFAM:SSF50969 EMBL:AADN02013450
EMBL:AADN02013451 IPI:IPI00578454 Ensembl:ENSGALT00000011586
Uniprot:F1N8L6
Length = 1495
Score = 324 (119.1 bits), Expect = 2.7e-44, Sum P(4) = 2.7e-44
Identities = 115/434 (26%), Positives = 190/434 (43%)
Query: 306 DCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFS 365
DC++++W DG +S LRGH+A ++ +A + ++ L + S D R+W R +
Sbjct: 138 DCLVKIWATDDGRLLSTLRGHSAEISDMAVNYE-NTL--LAAGSCDKIVRVWCLRTC--A 192
Query: 366 PRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTV-FVTGSSDTLARVWNACKP 424
P + S ++ +P+ + + + A+GT+ F ++T+ K
Sbjct: 193 PVAVLQGHSASITSIQFSPARKGTTR----YLTSTGADGTICFWQWHANTMKFKDRPVK- 247
Query: 425 NTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKE-----DS-TPKFKNSW 478
+ +P +I S + S V + L S E +S T K
Sbjct: 248 -FAERSRPGVQISCSSFSSGGMFIATGSTDHVIRIYYLGSESPEKMAELESHTDKVVAVQ 306
Query: 479 FCH--DNI--VTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVXXXXXXXXXXXXXXXX 534
FC+ D++ V+ SRDG+A +W + H + W L +
Sbjct: 307 FCNNGDSLRFVSGSRDGTARVW-----QYHQQ--EWKSVV-LDMATKMTGNNVASGEDKV 358
Query: 535 XILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFN 594
L V M+ W + V+ A+ + + VWN++ G L+HSL+GH + +VL+ HPF+
Sbjct: 359 TKLK----VTMVAWDRYDATVITAVNNFLLKVWNSSTGQLLHSLSGHDDEVFVLEAHPFD 414
Query: 595 PRIAMSAGYDGKTIVWDIWEGIPIR-------------IYEISRFRDGASIILSDDVGQL 641
RI +SAG+DG +WDI +G IR +++ DG +D G L
Sbjct: 415 QRIVLSAGHDGNIFIWDIDKGTKIRNYFNMIEGQGHGAVFDCKFSPDGQHFACTDSHGHL 474
Query: 642 YILNTGQGESQKDAKYDQFFLGDYRPLVQDTYGNVLDQETQLAPHRRNLQDP--LCDSAM 699
+ G + + FF DYRPL++D VLD++TQ APH L P L D
Sbjct: 475 LLFGFGCSKYYEKIPDQMFFHTDYRPLIRDANNYVLDEQTQQAPH---LMPPPFLVDVDG 531
Query: 700 IPYPEPYQTMYQQR 713
P+P +Q + R
Sbjct: 532 NPHPTRFQRLVPGR 545
Score = 314 (115.6 bits), Expect = 3.2e-43, Sum P(4) = 3.2e-43
Identities = 98/310 (31%), Positives = 150/310 (48%)
Query: 120 HIEKDHLVKLLKQLIINTSSPSRAMIGGDAPNAA-DVPTLLGRGSFSLLSYDRDKGQNEI 178
HI D+L+++ ++L P ++ + P + V TLLG G SLL +D
Sbjct: 3 HIPPDYLLRICERL-----GP---LLDKEIPQSVLGVQTLLGVGRQSLLRAAKDF----- 49
Query: 179 DHPPAHMRWP-HMYADQVRGLGLREIGGGFTRHHRAPSIRAA-----C--YAIAKPSTMV 230
H W +A RG E+ + + +I +A C ++ P++
Sbjct: 50 ----RHTLWKGSAFAALHRGRP-PELPVNYGKPPNVVNILSARQLTGCGRFSHLFPTSTY 104
Query: 231 QKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
Q+M+ KR+ GH ++VYC FDRSGR + TGSDD LVKIW+ + L++ RGH +I+D
Sbjct: 105 QQMKMHKRILGHLSSVYCIAFDRSGRRIFTGSDDCLVKIWATDDGRLLSTLRGHSAEISD 164
Query: 291 XXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSP-RPGSVYQLLSSS 349
D I+RVW L P++VL+GH+A++T+I FSP R G+ L S+
Sbjct: 165 MAVNYENTLLAAGSCDKIVRVWCLRTCAPVAVLQGHSASITSIQFSPARKGTTRYLTSTG 224
Query: 350 DDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVT 409
DGT W + + RP A S G Q I C +F++ G T
Sbjct: 225 ADGTICFWQWHANTMK---FKDRPV------KFAERSRPGVQ---ISCSSFSSGGMFIAT 272
Query: 410 GSSDTLARVW 419
GS+D + R++
Sbjct: 273 GSTDHVIRIY 282
Score = 246 (91.7 bits), Expect = 2.7e-44, Sum P(4) = 2.7e-44
Identities = 61/190 (32%), Positives = 98/190 (51%)
Query: 1439 WLMLSTHEEGSRYIPQLGDEVVYLRQGHQEYIN-------YSGSREVGPWITVKGNIRAV 1491
W+ L T S ++PQ+GDE++Y RQGH+ Y+ YS + + PW K +R
Sbjct: 870 WI-LDTIPRRSPFVPQMGDEIIYFRQGHEAYVRAVRKAKIYSINMQKQPWN--KMELREQ 926
Query: 1492 EFCKVESLEYATASGSGDSCCKMTLKFIDP-TSSVSNMTFRLTLPEVTGFPDFLVERTRF 1550
EF K ++Y G CC + L F+DP T ++ +F + ++ DFLV +
Sbjct: 927 EFVKTVGIKYEV--GPPTLCC-LKLAFLDPITGKMTGESFSIKYHDMPDVIDFLVLHQFY 983
Query: 1551 DAAIQRNWTCRDKCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPT 1610
+ A +RNW D+ + S D +WW G V S +P +E+PDS ++ Y+V + +
Sbjct: 984 NEAKERNWQIGDRFR------SIIDDAWWFGTVESQQPFQAEYPDSSFQCYSVHW--DNN 1035
Query: 1611 ETHLHSPWEL 1620
E SPW++
Sbjct: 1036 EREKMSPWDM 1045
Score = 120 (47.3 bits), Expect = 1.4e-30, Sum P(3) = 1.4e-30
Identities = 68/315 (21%), Positives = 126/315 (40%)
Query: 1451 YIPQLGDEVVYLRQGHQEYINYSGSREVGPWITVKGNIRAVEFCKVESLEYATASGSGDS 1510
Y Q G E Y+R + I YS + + PW K +R EF K ++Y G
Sbjct: 891 YFRQ-GHEA-YVRAVRKAKI-YSINMQKQPWN--KMELREQEFVKTVGIKYEV--GPPTL 943
Query: 1511 CCKMTLKFIDPTSSVSNMTFRLTLPEVTGFPDFLVERTRFDAAIQRNWTCRDKCK----- 1565
CC T ++ +F + ++ DFLV ++ A +RNW D+ +
Sbjct: 944 CCLKLAFLDPITGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQIGDRFRSIIDD 1003
Query: 1566 VWWKN--ESDE--DGSWWDG--RVLSVKPKSSEFPD-SPWERYTVQYKTE-PTETHLHSP 1617
WW ES + + D + SV ++E SPW+ + T P E P
Sbjct: 1004 AWWFGTVESQQPFQAEYPDSSFQCYSVHWDNNEREKMSPWDMEPIPEGTAYPEEVGAGVP 1063
Query: 1618 WELFDSDTQWEQPRIDD---DNRNKLLSAFAK-LEQSANR-VQDQYGVQKLKQVSQKTNF 1672
+ +P+ + +R++ + +EQ + + + + V +S +
Sbjct: 1064 VTPDELTALLYKPQEGEWGAHSRDEECERVIRGIEQLLSLDISNPFAVPV--DLSAYPMY 1121
Query: 1673 TNRFPVPLSLDVIQSRLENNYYRGLEAVKHDIAVMLSNAESYFGRNTDLSTKIKRLSDLV 1732
P L I+ RLEN +YR + A+ ++ + NA ++ ++ + K ++D++
Sbjct: 1122 CTVVAYPTDLTTIRRRLENRFYRRISALMWEVRYIEHNARTFNEPDSPIVKAAKIVTDVL 1181
Query: 1733 TRTLSSLKAPQFHDV 1747
R + D+
Sbjct: 1182 LRFIGDQSCTDILDI 1196
Score = 72 (30.4 bits), Expect = 3.6e-18, Sum P(4) = 3.6e-18
Identities = 21/81 (25%), Positives = 36/81 (44%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V I + R + DC + +W DG L+ +L GH+ + V+ N +A AG
Sbjct: 120 VYCIAFDRSGRRIFTGSDDCLVKIWATDDGRLLSTLRGHSAEISDMAVNYENTLLA--AG 177
Query: 603 YDGKTI-VWDIWEGIPIRIYE 622
K + VW + P+ + +
Sbjct: 178 SCDKIVRVWCLRTCAPVAVLQ 198
Score = 67 (28.6 bits), Expect = 1.2e-17, Sum P(4) = 1.2e-17
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 251 FDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDI 288
+DR VIT ++ L+K+W+ T L S GH+ ++
Sbjct: 368 WDRYDATVITAVNNFLLKVWNSSTGQLLHSLSGHDDEV 405
Score = 56 (24.8 bits), Expect = 2.7e-44, Sum P(4) = 2.7e-44
Identities = 30/128 (23%), Positives = 51/128 (39%)
Query: 1611 ETHLHSPWELFDSDTQWEQPRIDDDNRNKLLSAFAKLEQSANRVQDQYGVQKLKQVSQKT 1670
E H+ + + S Q Q R R +L S+ + S +R G QK ++ KT
Sbjct: 1367 ENHMKNIISEYKSAMQC-QKRKRPRYRKRLRSSSSS--PSTSRASSPKGKQKQMKIQPKT 1423
Query: 1671 NFTNRFPVPLSLDVIQSRLENNYYRGL-EAVKHDIAVMLS----NAESYFGRNTDLSTKI 1725
N P+ + + S + + L A ++ V S NA++ G D K+
Sbjct: 1424 NQNTSLPLTRTSSSVSSHVSDTTEEPLGSAAGEEVEVQPSSSGSNAQNRSGNTIDPG-KV 1482
Query: 1726 KRLSDLVT 1733
K + +T
Sbjct: 1483 KPIRSKLT 1490
Score = 48 (22.0 bits), Expect = 2.7e-44, Sum P(4) = 2.7e-44
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 1258 SDRGADGSQRLNAQIDSTSEHDP-LGSHSHS-HDPLGS-HSHSHS 1299
S +GA + R + DS+SE D +G+ S DP+ + S S S
Sbjct: 745 SQQGASQNSRAREESDSSSEEDETVGTSDASVDDPVATWQSDSSS 789
Score = 45 (20.9 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
Identities = 14/59 (23%), Positives = 31/59 (52%)
Query: 949 SLDDSEDVTKLDTPESH--VNAG---IRRLVLKLPVRDSNKHELQERTSDKCNQLVSVI 1002
S D+ E+V ++D ++G +RR + + P++ S + ++C QL+++I
Sbjct: 1207 STDEEEEVAEVDVDSDAPGTSSGKQRVRRRIKRQPMKGS-----PDAWKEQCKQLLNLI 1260
Score = 43 (20.2 bits), Expect = 4.5e-22, Sum P(4) = 4.5e-22
Identities = 17/79 (21%), Positives = 30/79 (37%)
Query: 646 TGQ--GESQKDAKYDQFFLGDYRPLVQDTYGNVLDQETQLAPHRRNLQDPLCDSAMIPYP 703
TG+ GES +D + D+ L Q Y ++ Q+ R++ D +
Sbjct: 955 TGKMTGESFSIKYHDMPDVIDFLVLHQ-FYNEAKERNWQIGDRFRSIIDDAWWFGTVESQ 1013
Query: 704 EPYQTMYQQRRLGALGIEW 722
+P+Q Y + W
Sbjct: 1014 QPFQAEYPDSSFQCYSVHW 1032
Score = 38 (18.4 bits), Expect = 2.9e-43, Sum P(4) = 2.9e-43
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 1319 SEGDGGGVGESTLNANNNNFHESATDGSRR 1348
+ GDG V E + N+ ES DG R
Sbjct: 561 ANGDGEVV-EQVIGQQTNDQDESILDGMIR 589
>UNIPROTKB|F1N1C9 [details] [associations]
symbol:BRWD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 GO:GO:0007010 Gene3D:2.130.10.10 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00700000104382 OMA:MTGNNLP InterPro:IPR011044
SUPFAM:SSF50969 EMBL:DAAA02072255 IPI:IPI00686367
Ensembl:ENSBTAT00000021597 Uniprot:F1N1C9
Length = 1658
Score = 311 (114.5 bits), Expect = 9.7e-43, Sum P(3) = 9.7e-43
Identities = 108/436 (24%), Positives = 186/436 (42%)
Query: 306 DCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFS 365
DC++++W DG ++ LRGH+A ++ +A + + + S D R+W R +
Sbjct: 58 DCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLI---AAGSCDKVVRVWCLRTC--A 112
Query: 366 PRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTV-FVTGSSDTL------ARV 418
P + S ++ PS+ + + + A+GT+ F T+ +
Sbjct: 113 PVAVLQGHSASITSIQFCPSTKGTTR----YLTSTGADGTICFWQWHVKTMKFKDRPVKF 168
Query: 419 WNACKPNTDDSDQP--NHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTPKFKN 476
+P S + + + +G + V + + G + + + E T K
Sbjct: 169 TERSRPGVQISCSSFSSGGMFITTGSTDHVIRIYYLGSEIPEKIA----ELESHTDKVVA 224
Query: 477 SWFCH--DNI--VTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVXXXXXXXXXXXXXX 532
FC+ D++ V+ SRDG+A IW + + W + +
Sbjct: 225 VQFCNNGDSLRFVSGSRDGTARIWQYQQQE-------WKS---IVLDMATKMTGNNLPSG 274
Query: 533 XXXILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHP 592
+ T V M+ W + V+ A+ + + VWN+ G L+H+L+GH + +VL+ HP
Sbjct: 275 EDKV--TKLKVTMVAWDRYDTTVITAVNNFLLKVWNSITGQLLHTLSGHDDEVFVLEAHP 332
Query: 593 FNPRIAMSAGYDGKTIVWDIWEGIPIR-------------IYEISRFRDGASIILSDDVG 639
F+ RI +SAG+DG VWD+ G IR +++ DG +D G
Sbjct: 333 FDQRIILSAGHDGNIFVWDLDRGTKIRNYFNMIEGQGHGAVFDCKFSPDGNHFACTDSHG 392
Query: 640 QLYILNTGQGESQKDAKYDQFFLGDYRPLVQDTYGNVLDQETQLAPHRRNLQDP--LCDS 697
L + G + + FF DYRPL++D VLD++TQ APH L P L D
Sbjct: 393 HLLLFGFGCSKYYEKIPDQMFFHTDYRPLIRDANNYVLDEQTQQAPH---LMPPPFLVDV 449
Query: 698 AMIPYPEPYQTMYQQR 713
P+P +Q + R
Sbjct: 450 DGNPHPTKFQRLVPGR 465
Score = 297 (109.6 bits), Expect = 3.1e-41, Sum P(3) = 3.1e-41
Identities = 69/195 (35%), Positives = 99/195 (50%)
Query: 226 PSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHE 285
PS Q ++ KR+ GH ++VYC FDRSGR + TGSDD LVKIW+ + LA+ RGH
Sbjct: 20 PSAAYQHIKMHKRILGHLSSVYCVAFDRSGRRIFTGSDDCLVKIWATDDGRLLATLRGHS 79
Query: 286 GDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRP-GSVYQ 344
+I+D D ++RVW L P++VL+GH+A++T+I F P G+
Sbjct: 80 AEISDMAVNYENTLIAAGSCDKVVRVWCLRTCAPVAVLQGHSASITSIQFCPSTKGTTRY 139
Query: 345 LLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANG 404
L S+ DGT W + RP S G Q I C +F++ G
Sbjct: 140 LTSTGADGTICFWQWHVKTMK---FKDRPV------KFTERSRPGVQ---ISCSSFSSGG 187
Query: 405 TVFVTGSSDTLARVW 419
TGS+D + R++
Sbjct: 188 MFITTGSTDHVIRIY 202
Score = 249 (92.7 bits), Expect = 9.7e-43, Sum P(3) = 9.7e-43
Identities = 133/552 (24%), Positives = 230/552 (41%)
Query: 1103 EVNGHVKPEKDGIDISCGEEITNCGDNTDEVPLKNVKNLSGENNDVYSGDASCKEQQS-- 1160
+V+G+ P K + G E NC D L V N GE + G + + +S
Sbjct: 448 DVDGNPHPTKFQRLVP-GRE--NCKDEQLIPQLGYVANGDGEVVEQVIGQQTNDQDESIL 504
Query: 1161 -GF-SELNYYDESKCVNTTDEDTTPYP-NHLQNGTIQPSELKEILTPVSTKLRIRSKRIL 1217
G EL + + +N D P ++ NG ++ ++ +P + LR RS +I
Sbjct: 505 DGIIRELQREQDLRLINEGDAPHFPINRSYSSNGALRNPDMDISASP-NIGLR-RSGQI- 561
Query: 1218 RDADVENQNNGCDALHGSSLDIKPNSLPEVLE--SDGTNRTSSD-RGADGSQRLNAQIDS 1274
+ + NN + + D+ S V+ ++G +R + R G ++
Sbjct: 562 -EGVRQMHNNAPRSQMATERDLMAWSRRVVVNELNNGVSRVQEECRTVKGDIEISLY--- 617
Query: 1275 TSEHDPLGSHSHSHDPLGSHSHSHSRKMFNVVYRRSKTNRDRTNSEGDGGGVGESTLNAN 1334
T E S++ + S+ R + +R T + R+N E + S +
Sbjct: 618 TVEKKKKPSYTTQRS---DYQPSYGRSLRRTQRKRQHTYQTRSNIEHN------SRASCQ 668
Query: 1335 NNNFHESATDGSRRTRSMGLKTTTC-DP------DNVSSNLRLEQHNQPEDMYSGHN--- 1384
N+ E + S ++G + DP ++ SS+ E + D +G N
Sbjct: 669 NSGVQEDSDSSSEEDETVGTSDASIEDPVIEWQSESSSSDSSSEYSDWTAD--AGINLQP 726
Query: 1385 --RSTSR-----CQLPHEE-WGSSSKMTVGLRSTRNRRTSYLFCDSSPIDRRKTHQSLRK 1436
R T + C EE S + + TR ++ + P + Q
Sbjct: 727 PKRQTRQATQKICSSSEEENLKSLEERQKKPKQTRKKKGGLVSMAGEPNEEWFAPQ---- 782
Query: 1437 GSWLMLSTHEEGSRYIPQLGDEVVYLRQGHQEYIN-------YSGSREVGPWITVKGNIR 1489
W+ L T S ++PQ+GDE++Y RQGH+ Y+ YS + + PW K ++R
Sbjct: 783 --WI-LDTIPRRSPFVPQMGDELIYFRQGHEAYVRAVRKSKTYSVNLQKQPWN--KMDLR 837
Query: 1490 AVEFCKVESLEYATASGSGDSCCKMTLKFIDPTSS-VSNMTFRLTLPEVTGFPDFLVERT 1548
EF K+ ++Y G CC + L F+DP S ++ +F + ++ DFLV
Sbjct: 838 EQEFVKIVGIKYEI--GPPTLCC-LKLAFLDPISGKMTGESFSIKYHDMPDVIDFLVLHQ 894
Query: 1549 RFDAAIQRNWTCRDKCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTE 1608
++ A +RNW D+ + S D +WW G V S +P E+PDS ++ Y+V + +
Sbjct: 895 FYNEAKERNWQIGDRFR------SIIDDAWWFGTVESQQPFQPEYPDSSFQCYSVHW--D 946
Query: 1609 PTETHLHSPWEL 1620
E SPW++
Sbjct: 947 NNEREKMSPWDM 958
Score = 111 (44.1 bits), Expect = 1.8e-27, Sum P(3) = 1.8e-27
Identities = 63/300 (21%), Positives = 118/300 (39%)
Query: 1451 YIPQLGDEVVYLRQGHQEYINYSGSREVGPWITVKGNIRAVEFCKVESLEYATASGSGDS 1510
Y Q G E Y+R + YS + + PW K ++R EF K+ ++Y G
Sbjct: 804 YFRQ-GHEA-YVRAVRKSK-TYSVNLQKQPWN--KMDLREQEFVKIVGIKYEI--GPPTL 856
Query: 1511 CCKMTLKFIDPTSSVSNMTFRLTLPEVTGFPDFLVERTRFDAAIQRNWTCRDKCK----- 1565
CC + ++ +F + ++ DFLV ++ A +RNW D+ +
Sbjct: 857 CCLKLAFLDPISGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQIGDRFRSIIDD 916
Query: 1566 VWWKN--ESDE--DGSWWDG--RVLSVKPKSSEFPD-SPWERYTVQYKTE-PTETHLHSP 1617
WW ES + + D + SV ++E SPW+ + T P E P
Sbjct: 917 AWWFGTVESQQPFQPEYPDSSFQCYSVHWDNNEREKMSPWDMEPIPEGTAFPDEVGAGVP 976
Query: 1618 WELFDSDTQWEQPRIDDDNRNKLLSAFAKLEQSANRVQDQYGVQKLK---QVSQKTNFTN 1674
+ +P+ + + ++ Q N + +S +
Sbjct: 977 VSQEELTALLYKPQEGEWGAHSRDEECERVIQGINHLLSLDFASPFAVPVDLSAYPLYCT 1036
Query: 1675 RFPVPLSLDVIQSRLENNYYRGLEAVKHDIAVMLSNAESYFGRNTDLSTKIKRLSDLVTR 1734
P L+ I+ RLEN +YR + A+ ++ + NA ++ ++ + K ++D++ R
Sbjct: 1037 VVAYPTDLNTIRRRLENRFYRRISALMWEVRYIEHNARTFNEPDSPIVKAAKIVTDVLLR 1096
Score = 73 (30.8 bits), Expect = 6.2e-18, Sum P(3) = 6.2e-18
Identities = 21/81 (25%), Positives = 36/81 (44%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V + + R + DC + +W DG L+ +L GH+ + V+ N IA AG
Sbjct: 40 VYCVAFDRSGRRIFTGSDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLIA--AG 97
Query: 603 YDGKTI-VWDIWEGIPIRIYE 622
K + VW + P+ + +
Sbjct: 98 SCDKVVRVWCLRTCAPVAVLQ 118
Score = 61 (26.5 bits), Expect = 1.0e-16, Sum P(3) = 1.0e-16
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 251 FDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDI 288
+DR VIT ++ L+K+W+ T L + GH+ ++
Sbjct: 288 WDRYDTTVITAVNNFLLKVWNSITGQLLHTLSGHDDEV 325
Score = 51 (23.0 bits), Expect = 9.7e-43, Sum P(3) = 9.7e-43
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 1679 PLSLDVIQSRLEN-NYYRGLEAVKHDIAVMLSNAESYFG-RNTDLSTKIKRLSDLVTRTL 1736
P+ ++ LE NY LE K D+ + SN+++Y + + + + RLS L +
Sbjct: 1225 PMDFSTVKETLETGNYGSPLEFYK-DVRQIFSNSKAYTSNKKSRIYSMTLRLSALFESRI 1283
Query: 1737 SSL 1739
++
Sbjct: 1284 KNI 1286
Score = 50 (22.7 bits), Expect = 2.6e-20, Sum P(4) = 2.6e-20
Identities = 40/164 (24%), Positives = 69/164 (42%)
Query: 975 LKL-PVRDSNKHELQERTSDKCNQLVS--VIGTSSEAHQEATEGNGNRVSYVGNNCSSVD 1031
+KL P D N R S + VS G S + +G + S+ G N S
Sbjct: 1330 MKLQPKNDQNTSVSYARNSTPFSSPVSDAAEGLSLYLLDDEPDGPFSSSSFSGYNRSGNS 1389
Query: 1032 ANCGLMER-RGRGQFDKLEDYLN--LSNGYKDGKIRWGGVRARSSKRLKIGEMMPLDANN 1088
+ G + R R K + ++ L+NG DG+ G++ R + E+M
Sbjct: 1390 HDPGKAKSFRNRVLPIKQDHSIDGPLTNG--DGREPRTGIKRRLLSASEEDEIM------ 1441
Query: 1089 GSGIHLDDDKEKESEVNGHVKPEKDG-IDISCGEEITNCGDNTD 1131
G ++ ++KE++ H+ + G ++ S E T CG ++D
Sbjct: 1442 GR----EEKEKKETKEKSHLSSSESGELESSLSSEST-CGSDSD 1480
Score = 42 (19.8 bits), Expect = 1.8e-27, Sum P(3) = 1.8e-27
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 762 VMDWEPENEVQSDDNDSEYN 781
V++W+ E+ S D+ SEY+
Sbjct: 697 VIEWQSESS--SSDSSSEYS 714
Score = 42 (19.8 bits), Expect = 1.7e-19, Sum P(4) = 1.7e-19
Identities = 31/108 (28%), Positives = 41/108 (37%)
Query: 1088 NGSGIHLDDDKEKESEVNGHVKPEKDGIDISCGEEITNCGDNTDEVPLKNVKN--LSGEN 1145
N SG D K K V P K D S +TN GD + P +K LS
Sbjct: 1384 NRSGNSHDPGKAKS--FRNRVLPIKQ--DHSIDGPLTN-GDGRE--PRTGIKRRLLSASE 1436
Query: 1146 NDVYSG--DASCKE---------QQSGFSELNYYDESKCVNTTDEDTT 1182
D G + KE +SG E + ES C + +D ++T
Sbjct: 1437 EDEIMGREEKEKKETKEKSHLSSSESGELESSLSSESTCGSDSDSEST 1484
Score = 41 (19.5 bits), Expect = 7.8e-19, Sum P(4) = 7.8e-19
Identities = 15/74 (20%), Positives = 27/74 (36%)
Query: 649 GESQKDAKYDQFFLGDYRPLVQDTYGNVLDQETQLAPHRRNLQDPLCDSAMIPYPEPYQT 708
GES +D + D+ L Q Y ++ Q+ R++ D + +P+Q
Sbjct: 873 GESFSIKYHDMPDVIDFLVLHQ-FYNEAKERNWQIGDRFRSIIDDAWWFGTVESQQPFQP 931
Query: 709 MYQQRRLGALGIEW 722
Y + W
Sbjct: 932 EYPDSSFQCYSVHW 945
Score = 40 (19.1 bits), Expect = 2.1e-20, Sum P(4) = 2.1e-20
Identities = 9/10 (90%), Positives = 9/10 (90%)
Query: 835 TSSGRRVKRR 844
TSSGRRVK R
Sbjct: 1139 TSSGRRVKCR 1148
Score = 37 (18.1 bits), Expect = 2.8e-41, Sum P(3) = 2.8e-41
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 1719 TDLSTKIKRLSDLVTRTLSSL 1739
TDL+T +RL + R +S+L
Sbjct: 1042 TDLNTIRRRLENRFYRRISAL 1062
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 159 (61.0 bits), Expect = 4.8e-16, Sum P(3) = 4.8e-16
Identities = 39/143 (27%), Positives = 62/143 (43%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
I + GH ++ F G+++ T S D+ VKIW+M C + GH+ + D
Sbjct: 72 ISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSA 131
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D ++++ +P L+GHT V F+P+ V +S S D + R
Sbjct: 132 DSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLV---VSGSFDESVR 188
Query: 356 IWDARYSQFSPRIYIPRPSDAVA 378
IWD R + P SD V+
Sbjct: 189 IWDVRTGMCVKTL--PAHSDPVS 209
Score = 158 (60.7 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 36/130 (27%), Positives = 60/130 (46%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
V ++ K ++GH N V+C F+ V++GS D V+IW + T C+ + H ++
Sbjct: 150 VPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVS 209
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVL-RGHTAAVTAIAFSPRPGSVYQLLSS 348
D ++R+W +G + L V + FSP G Y +LSS
Sbjct: 210 AVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPN-GK-Y-ILSS 266
Query: 349 SDDGTCRIWD 358
+ D T ++WD
Sbjct: 267 NLDNTLKLWD 276
Score = 140 (54.3 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 33/127 (25%), Positives = 59/127 (46%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ + GH+ V + + ++T SDD+ +KI+ + T + +GH +
Sbjct: 115 RTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQ 174
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D +R+W + G+ + L H+ V+A++F+ R GS+ + S S DG RI
Sbjct: 175 SSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFN-RDGSL--ITSGSYDGLVRI 231
Query: 357 WDARYSQ 363
WD Q
Sbjct: 232 WDTANGQ 238
Score = 105 (42.0 bits), Expect = 4.8e-16, Sum P(3) = 4.8e-16
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 553 RFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI-VW 610
+++++ DC+I VWN +V SL GHT++ D HP IA A TI +W
Sbjct: 306 KWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIW 364
Score = 74 (31.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 392 SHQIFCCAFNANGTVFVTGSSDTLARVWN 420
++ +FCC FN ++ V+GS D R+W+
Sbjct: 163 TNYVFCCNFNPQSSLVVSGSFDESVRIWD 191
Score = 68 (29.0 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 19/82 (23%), Positives = 40/82 (48%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNP--RIAMS 600
V+ + ++ D + + D + +W+ A+G V +L E+ V V F+P + +S
Sbjct: 208 VSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDD-ENPPVAFVK-FSPNGKYILS 265
Query: 601 AGYDGKTIVWDIWEGIPIRIYE 622
+ D +WD +G ++ Y+
Sbjct: 266 SNLDNTLKLWDFGKGKTLKQYQ 287
Score = 65 (27.9 bits), Expect = 4.8e-16, Sum P(3) = 4.8e-16
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 392 SHQIFCCAFNANGTVFVTGSSDTLARVWNA----C-KPNTDDSDQP 432
S + +FN +G++ +GS D L R+W+ C K DD + P
Sbjct: 205 SDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPP 250
Score = 61 (26.5 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 14/72 (19%), Positives = 34/72 (47%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVL--DVHPFNPRIAMS 600
V + +S + +++L++ +D + +W+ G + GH + Y + + + +S
Sbjct: 251 VAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIIS 310
Query: 601 AGYDGKTIVWDI 612
D K VW++
Sbjct: 311 GSEDCKIYVWNL 322
Score = 42 (19.8 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAV 456
F+ NG ++ + D ++W+ K T + GHEN+ Y F+ +V
Sbjct: 256 FSPNGKYILSSNLDNTLKLWDFGKGKT---------LKQYQGHENN-KYCIFANFSV 302
Score = 38 (18.4 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 391 QSHQI--FCCAFN---ANGTVFVTGSSDTLARVWN 420
Q H+ +C N G ++GS D VWN
Sbjct: 287 QGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWN 321
>RGD|1564964 [details] [associations]
symbol:Phip "pleckstrin homology domain interacting protein"
species:10116 "Rattus norvegicus" [GO:0001932 "regulation of
protein phosphorylation" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0006606 "protein import into nucleus"
evidence=IEA;ISO] [GO:0007010 "cytoskeleton organization"
evidence=IEA;ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA;ISO] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEA;ISO] [GO:0010800 "positive
regulation of peptidyl-threonine phosphorylation" evidence=IEA;ISO]
[GO:0022604 "regulation of cell morphogenesis" evidence=IEA;ISO]
[GO:0033138 "positive regulation of peptidyl-serine
phosphorylation" evidence=IEA;ISO] [GO:0040008 "regulation of
growth" evidence=IEA;ISO] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA;ISO] [GO:0043568 "positive
regulation of insulin-like growth factor receptor signaling
pathway" evidence=ISO] [GO:0045840 "positive regulation of mitosis"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0070577 "histone acetyl-lysine binding" evidence=IEA;ISO]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 RGD:1564964 GO:GO:0005634 GO:GO:0008286 GO:GO:0007010
GO:GO:0043066 GO:GO:0008284 GO:GO:0045944 GO:GO:0010800
GO:GO:0006606 GO:GO:0040008 GO:GO:0033138 GO:GO:0022604
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 IPI:IPI00911360
Ensembl:ENSRNOT00000011864 Uniprot:F1M3B3
Length = 1196
Score = 237 (88.5 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 84/324 (25%), Positives = 137/324 (42%)
Query: 1313 NRDRTNSEGDGGGVGESTLNANNNNFHESATDGSRRTRSMGLKTTTCDPD-NVSSNLRLE 1371
N ++ EG+ V T +H +DGS S T D N+ ++
Sbjct: 188 NGTSSSDEGEVLAVSGGTSEEEERAWH---SDGSSSDYSSDYSDWTADAGINLQPPKKVP 244
Query: 1372 QHN-QPEDMYSGHNRSTSRCQLPH--EEWGSSSKMTVGLRSTRNRRTSYLFCDSSPIDRR 1428
+H + +D S + + H +E +++ G S + ++ +
Sbjct: 245 KHKTKKQDSSSDEEEESENQKQKHIKKERKKANEEKDGPTSPKKKKPKERKQKRLAVGEL 304
Query: 1429 KTHQSLRKGSWL----MLSTHEEGSRYIPQLGDEVVYLRQGHQEYIN-------YSGSRE 1477
T L WL + T ++PQ+GDEV Y RQGH+ Y+ YS + +
Sbjct: 305 -TENGLTLEEWLPSAWITDTLPRRCPFVPQMGDEVYYFRQGHEAYVEMARKNRIYSINPK 363
Query: 1478 VGPWITVKGNIRAVEFCKVESLEYATASGSGDSCCKMTLKFIDP-TSSVSNMTFRLTLPE 1536
PW K +R E K+ ++Y G CC + L F+DP T ++ +F + +
Sbjct: 364 KQPWH--KMELREQELMKIVGIKYEV--GLPTLCC-LKLAFLDPDTGKLTGGSFTMKYHD 418
Query: 1537 VTGFPDFLVERTRFDAAIQRNWTCRDKCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDS 1596
+ DFLV R +FD A R W D+ + S D +WW G + S +P E+PDS
Sbjct: 419 MPDVIDFLVLRQQFDDAKYRRWNIGDRFR------SVIDDAWWFGTIESQEPLQPEYPDS 472
Query: 1597 PWERYTVQYKTEPTETHLHSPWEL 1620
++ Y V + TE SPW++
Sbjct: 473 LFQCYNVCWDNGDTEKM--SPWDM 494
Score = 54 (24.1 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 1679 PLSLDVIQSRLE-NNYYRGLEAVKHDIAVMLSNAESYF-GRNTDLSTKIKRLS----DLV 1732
P+ ++ LE NY +E K D+ ++ SN+++Y + + + + RLS + +
Sbjct: 734 PMDFATVRETLEAGNYESPMELCK-DVRLIFSNSKAYTPSKRSRIYSMSLRLSAFFEEHI 792
Query: 1733 TRTLSSLK-APQFH 1745
+ LS K A +FH
Sbjct: 793 SSVLSDYKSALRFH 806
Score = 40 (19.1 bits), Expect = 9.4e-14, Sum P(2) = 9.4e-14
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 1719 TDLSTKIKRLSDLVTRTLSSL 1739
TDLST +RL + R SSL
Sbjct: 578 TDLSTIKQRLENRFYRRFSSL 598
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 160 (61.4 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 38/135 (28%), Positives = 66/135 (48%)
Query: 239 VRGHRNAVYCAIF-DRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXX 297
+ GH + + C+ F + ++TG+ D +IW +T + + +GH +
Sbjct: 139 IAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDG 198
Query: 298 XXXXXXXXDCIIRVWRLPDGLPIS-VLRGHTAAVTAIAFSP----RPGSVYQLLSSSDDG 352
D IR+W G + LRGH+ +T++++ P +PGS +L SSS DG
Sbjct: 199 EVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDG 258
Query: 353 TCRIWD--ARYSQFS 365
T +IWD +R Q++
Sbjct: 259 TIKIWDTVSRVCQYT 273
Score = 128 (50.1 bits), Expect = 0.00030, P = 0.00030
Identities = 41/154 (26%), Positives = 67/154 (43%)
Query: 225 KPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWS-METAYCLASCRG 283
KPST + + K + + C S ++T SDD + +W+ +++ +A G
Sbjct: 345 KPSTPEEAQK--KALENYEKI--CKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTG 400
Query: 284 HEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVY 343
H+ + D I++W DG IS RGH A+V +A+S
Sbjct: 401 HQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWS---SDCR 457
Query: 344 QLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAV 377
L+S S D T ++WD R + S + +P D V
Sbjct: 458 LLVSCSKDTTLKVWDVRTRKLS--VDLPGHKDEV 489
Score = 126 (49.4 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 34/128 (26%), Positives = 54/128 (42%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASC-RGHEGDITDXXXX--- 294
++GH N V C + G + TGS D +++W ++ CL RGH IT
Sbjct: 182 LKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIH 241
Query: 295 ----XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSD 350
D I++W + + GHT +V+ + + + G +Y S S
Sbjct: 242 LVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQ-GLLY---SGSH 297
Query: 351 DGTCRIWD 358
D T R+WD
Sbjct: 298 DRTVRVWD 305
Score = 115 (45.5 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 58/235 (24%), Positives = 95/235 (40%)
Query: 392 SHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQF 451
++ + C + G ++ +GS D RVW D + I++L H + VN++
Sbjct: 278 TNSVSCVKWGGQGLLY-SGSHDRTVRVW--------DINSQGRCINILKSHAHWVNHLSL 328
Query: 452 SGCAVASRFSLAD-SSKEDSTPK------FKN-SWFCHDN------IVTCSRDGSAIIWI 497
S A R D + K+ STP+ +N C N +VT S D + +W
Sbjct: 329 S-TDYALRIGAFDHTGKKPSTPEEAQKKALENYEKICKKNGNSEEMMVTASDDYTMFLWN 387
Query: 498 PRSRRSHPKAARWTQAYHLKVXXXXXXXXXXXXXXXXXILPTPRGVNMIVWSLDNRFVLA 557
P +S AR T H K+ VN + +S D R++++
Sbjct: 388 PL--KSTKPIARMTG--HQKL------------------------VNHVAFSPDGRYIVS 419
Query: 558 AIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDI 612
A D I +W+ DG + + GH S Y + + R+ +S D VWD+
Sbjct: 420 ASFDNSIKLWDGRDGKFISTFRGHVASVYQV-AWSSDCRLLVSCSKDTTLKVWDV 473
Score = 81 (33.6 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 19/68 (27%), Positives = 29/68 (42%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V + WS D R +++ D + VW+ L L GH + Y +D R+ S G
Sbjct: 447 VYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRVC-SGG 505
Query: 603 YDGKTIVW 610
D +W
Sbjct: 506 KDKMVRLW 513
Score = 70 (29.7 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 321 SVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
S + GH + + AF+P S ++++ + D T RIWD
Sbjct: 137 SAIAGHGSTILCSAFAPHTSS--RMVTGAGDNTARIWD 172
Score = 65 (27.9 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 36/123 (29%), Positives = 56/123 (45%)
Query: 398 CAFNANGT-VFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS--GC 454
C N N + VT S D +WN K S +P I ++GH+ VN+V FS G
Sbjct: 364 CKKNGNSEEMMVTASDDYTMFLWNPLK-----STKP---IARMTGHQKLVNHVAFSPDGR 415
Query: 455 AVASRFSLADSSK--EDSTPKFKNSWFCH-----------DN--IVTCSRDGSAIIWIPR 499
+ S S +S K + KF +++ H D +V+CS+D + +W R
Sbjct: 416 YIVSA-SFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVR 474
Query: 500 SRR 502
+R+
Sbjct: 475 TRK 477
Score = 52 (23.4 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 561 DCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDI 612
D I +W+ ++++GHT S V V + S +D VWDI
Sbjct: 257 DGTIKIWDTVSRVCQYTMSGHTNS--VSCVKWGGQGLLYSGSHDRTVRVWDI 306
Score = 52 (23.4 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 15/62 (24%), Positives = 29/62 (46%)
Query: 555 VLAAIMDCRICVWNAADGSL-VHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIW 613
++ A D + +WN + + +TGH + + P + R +SA +D +WD
Sbjct: 374 MVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSP-DGRYIVSASFDNSIKLWDGR 432
Query: 614 EG 615
+G
Sbjct: 433 DG 434
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 184 (69.8 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 38/127 (29%), Positives = 64/127 (50%)
Query: 234 QNIKRVRGHRNAVYCAIFDRS-GRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
+ + + GHRN VY F+ G + TGS D+ K+WS+ET C + RGH +I
Sbjct: 125 EELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLS 184
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
D ++W + +G + LRGH+A + +++F+ G ++++ S D
Sbjct: 185 FNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTS-GD--RIITGSFDH 241
Query: 353 TCRIWDA 359
T +WDA
Sbjct: 242 TVVVWDA 248
Score = 176 (67.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 37/122 (30%), Positives = 61/122 (50%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
+ + GH + + + FD +G+ + T S D +I+S T C+A GHEG+I+
Sbjct: 296 VATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNP 355
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D R+W G + VL GHT + + AF+ + G++ +++ S D TCR
Sbjct: 356 QGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYK-GNI--VITGSKDNTCR 412
Query: 356 IW 357
IW
Sbjct: 413 IW 414
Score = 160 (61.4 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 37/123 (30%), Positives = 58/123 (47%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH + A F+ ++TGS D+ K+W C+A+ GH+ +I D
Sbjct: 259 GHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLI 318
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
D R++ I+ L GH ++ I+F+P+ G+ LL+ S D T RIWDA+
Sbjct: 319 ATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQ-GN--HLLTGSSDKTARIWDAQ 375
Query: 361 YSQ 363
Q
Sbjct: 376 TGQ 378
Score = 155 (59.6 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 33/120 (27%), Positives = 54/120 (45%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXX 299
RGH + C F+ V TGS D K+W ++ + + RGH +I
Sbjct: 174 RGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDR 233
Query: 300 XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA 359
D + VW G +++L GH A +++ +F+ +L+ S D TC++WDA
Sbjct: 234 IITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFN---WDCSLILTGSMDKTCKLWDA 290
Score = 126 (49.4 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 33/130 (25%), Positives = 56/130 (43%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
+Q + + +RGH + F+ SG +ITGS D V +W +T + GH +I+
Sbjct: 206 IQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEIS 265
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D ++W +G ++ L GH + F G + + ++S
Sbjct: 266 SASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFD-YTGKL--IATAS 322
Query: 350 DDGTCRIWDA 359
DGT RI+ A
Sbjct: 323 ADGTARIFSA 332
Score = 115 (45.5 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 31/123 (25%), Positives = 51/123 (41%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX- 295
K ++ H + ++SG ITGS DR K+W + L + GH +
Sbjct: 86 KVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNP 145
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D ++W + G RGHTA + ++F+P+ V + S D T +
Sbjct: 146 YGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLV---ATGSMDTTAK 202
Query: 356 IWD 358
+WD
Sbjct: 203 LWD 205
Score = 84 (34.6 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 394 QIFCCAFNANGTVFVTGSSDTLARVW 419
+IF CAFN G + +TGS D R+W
Sbjct: 389 EIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 83 (34.3 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 22/87 (25%), Positives = 35/87 (40%)
Query: 271 SMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAV 330
S T Y + H +T+ D ++W G ++ L GH V
Sbjct: 78 SNHTFYLFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVV 137
Query: 331 TAIAFSPRPGSVYQLLSSSDDGTCRIW 357
AIAF+ G ++ + S D TC++W
Sbjct: 138 YAIAFNNPYGD--KIATGSFDKTCKLW 162
Score = 78 (32.5 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 23/73 (31%), Positives = 37/73 (50%)
Query: 399 AFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVAS 458
+FN G +TGSSD AR+W+A Q + VL GH +++ FS CA
Sbjct: 352 SFNPQGNHLLTGSSDKTARIWDA---------QTGQCLQVLEGHTDEI----FS-CAFNY 397
Query: 459 RFSLADSSKEDST 471
+ ++ + +D+T
Sbjct: 398 KGNIVITGSKDNT 410
Score = 78 (32.5 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 394 QIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS 452
+I C +FN T+ TGS DT A++W+ Q E+ L GH ++ + F+
Sbjct: 179 EIVCLSFNPQSTLVATGSMDTTAKLWDI---------QNGEEVYTLRGHSAEIISLSFN 228
Score = 76 (31.8 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWE 614
V MD +W+ +G V++L GH+ L + RI ++ +D +VWD
Sbjct: 192 VATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRI-ITGSFDHTVVVWDADT 250
Query: 615 GIPIRI 620
G + I
Sbjct: 251 GRKVNI 256
Score = 72 (30.4 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 30/122 (24%), Positives = 51/122 (41%)
Query: 551 DNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLD-VHPFNPRIAMSAGYDGKTIV 609
D +L MD +W+A +G V +LTGH + +LD + ++ +A DG +
Sbjct: 272 DCSLILTGSMDKTCKLWDATNGKCVATLTGHDDE--ILDSCFDYTGKLIATASADGTARI 329
Query: 610 WDI--------WEGIPIRIYEISRFRDGASIIL--SDDVGQLYILNTGQGESQKDAKYDQ 659
+ EG I +IS G ++ SD +++ TGQ + D+
Sbjct: 330 FSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDE 389
Query: 660 FF 661
F
Sbjct: 390 IF 391
Score = 64 (27.6 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 392 SHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQF 451
S +I +FN +G +TGS D VW+A D+ + ++++L GH +++ F
Sbjct: 219 SAEIISLSFNTSGDRIITGSFDHTVVVWDA------DTGR---KVNILIGHCAEISSASF 269
Query: 452 S-GCAVASRFSLADSSK 467
+ C++ S+ + K
Sbjct: 270 NWDCSLILTGSMDKTCK 286
Score = 56 (24.8 bits), Expect = 1.7e-12, Sum P(3) = 1.7e-12
Identities = 13/68 (19%), Positives = 28/68 (41%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
++ I ++ +L D +W+A G + L GHT+ + + + I ++
Sbjct: 348 ISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFN-YKGNIVITGS 406
Query: 603 YDGKTIVW 610
D +W
Sbjct: 407 KDNTCRIW 414
Score = 55 (24.4 bits), Expect = 1.7e-12, Sum P(3) = 1.7e-12
Identities = 20/78 (25%), Positives = 35/78 (44%)
Query: 375 DAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNH 434
DA G+ +A + G + C F+ G + T S+D AR+++A
Sbjct: 289 DATNGKCVA--TLTGHDDEILDSC-FDYTGKLIATASADGTARIFSAATRKC-------- 337
Query: 435 EIDVLSGHENDVNYVQFS 452
I L GHE +++ + F+
Sbjct: 338 -IAKLEGHEGEISKISFN 354
Score = 51 (23.0 bits), Expect = 4.2e-12, Sum P(3) = 4.2e-12
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 394 QIFCCAFNANGTVFVTGSSDTLARVWNA 421
+I +FN + ++ +TGS D ++W+A
Sbjct: 263 EISSASFNWDCSLILTGSMDKTCKLWDA 290
Score = 51 (23.0 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 13/61 (21%), Positives = 25/61 (40%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWE 614
++ D + VW+A G V+ L GH + ++ + ++ D +WD
Sbjct: 234 IITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFN-WDCSLILTGSMDKTCKLWDATN 292
Query: 615 G 615
G
Sbjct: 293 G 293
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 158 (60.7 bits), Expect = 9.6e-13, Sum P(2) = 9.6e-13
Identities = 35/123 (28%), Positives = 58/123 (47%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
K ++GH N V+C F+ V++GS D V+IW ++T C+ + H ++
Sbjct: 165 KTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRD 224
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVL-RGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D ++R+W +G I L V + FSP G Y +L+S+ D T +
Sbjct: 225 GSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPN-GK-Y-ILASNLDSTLK 281
Query: 356 IWD 358
+WD
Sbjct: 282 LWD 284
Score = 147 (56.8 bits), Expect = 8.4e-14, Sum P(3) = 8.4e-14
Identities = 37/140 (26%), Positives = 61/140 (43%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+ GH ++ A F G+Y+ T S D+ VKIW+M+ C + GH+ + D
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSR 142
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D ++++ + L+GH V F+P+ V +S S D + RIWD
Sbjct: 143 CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLV---VSGSFDESVRIWD 199
Query: 359 ARYSQFSPRIYIPRPSDAVA 378
+ + P SD V+
Sbjct: 200 VKTGMCIKTL--PAHSDPVS 217
Score = 143 (55.4 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 35/127 (27%), Positives = 60/127 (47%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ + GH+ V + R V++ SDD+ +KI+ + T+ + +GH +
Sbjct: 123 RTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQ 182
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D +R+W + G+ I L H+ V+A++F+ R GS+ + S S DG RI
Sbjct: 183 SSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFN-RDGSL--IASGSYDGLVRI 239
Query: 357 WDARYSQ 363
WD Q
Sbjct: 240 WDTANGQ 246
Score = 96 (38.9 bits), Expect = 8.4e-14, Sum P(3) = 8.4e-14
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 553 RFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA-GYDGKTIVW 610
+++++ DC+I +WN +V L GHT+ D HP IA A D K +W
Sbjct: 314 KWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 96 (38.9 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 30/126 (23%), Positives = 48/126 (38%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGD-ITDXXXX 294
IK + H + V F+R G + +GS D LV+IW C+ + E +
Sbjct: 206 IKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFS 265
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIA--FSPRPGSVYQLLSSSDDG 352
D +++W G + GH + I FS G ++S S+D
Sbjct: 266 PNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGK--WIISGSEDC 323
Query: 353 TCRIWD 358
IW+
Sbjct: 324 KIYIWN 329
Score = 75 (31.5 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 16/72 (22%), Positives = 36/72 (50%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVL--DVHPFNPRIAMS 600
V + +S + +++LA+ +D + +W+ + G + TGH S Y + + + +S
Sbjct: 259 VAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIIS 318
Query: 601 AGYDGKTIVWDI 612
D K +W++
Sbjct: 319 GSEDCKIYIWNL 330
Score = 75 (31.5 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 20/69 (28%), Positives = 33/69 (47%)
Query: 392 SHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQF 451
++ +FCC FN ++ V+GS D R+W+ + I L H + V+ V F
Sbjct: 171 NNYVFCCNFNPQSSLVVSGSFDESVRIWDV---------KTGMCIKTLPAHSDPVSAVSF 221
Query: 452 S--GCAVAS 458
+ G +AS
Sbjct: 222 NRDGSLIAS 230
Score = 67 (28.6 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 19/81 (23%), Positives = 33/81 (40%)
Query: 278 LASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSP 337
+ + GH I+ D +++W + + L GH V IA+S
Sbjct: 80 MCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSS 139
Query: 338 RPGSVYQLLSSSDDGTCRIWD 358
V +S+SDD T +I++
Sbjct: 140 DSRCV---VSASDDKTLKIFE 157
Score = 66 (28.3 bits), Expect = 8.4e-14, Sum P(3) = 8.4e-14
Identities = 26/97 (26%), Positives = 44/97 (45%)
Query: 392 SHQIFCCAFNANGTVFVTGSSDTLARVWNA----C-KPNTDDSDQPNHEIDVLSGHENDV 446
S + +FN +G++ +GS D L R+W+ C K DD + P + + N
Sbjct: 213 SDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPP---VAFVKFSPNG- 268
Query: 447 NYVQFSGCAVASRFSLADSSKEDSTPKF---KNSWFC 480
Y+ S + S L D SK + ++ +NS +C
Sbjct: 269 KYILASN--LDSTLKLWDFSKGKTLKQYTGHENSKYC 303
Score = 61 (26.5 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 17/81 (20%), Positives = 39/81 (48%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNP--RIAMS 600
V+ + ++ D + + D + +W+ A+G + +L E+ V V F+P + ++
Sbjct: 216 VSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDD-ENPPVAFVK-FSPNGKYILA 273
Query: 601 AGYDGKTIVWDIWEGIPIRIY 621
+ D +WD +G ++ Y
Sbjct: 274 SNLDSTLKLWDFSKGKTLKQY 294
Score = 37 (18.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 10/46 (21%), Positives = 17/46 (36%)
Query: 375 DAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
D G+ + + + IF G ++GS D +WN
Sbjct: 284 DFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWN 329
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 158 (60.7 bits), Expect = 9.6e-13, Sum P(2) = 9.6e-13
Identities = 35/123 (28%), Positives = 58/123 (47%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
K ++GH N V+C F+ V++GS D V+IW ++T C+ + H ++
Sbjct: 165 KTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRD 224
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVL-RGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D ++R+W +G I L V + FSP G Y +L+S+ D T +
Sbjct: 225 GSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPN-GK-Y-ILASNLDSTLK 281
Query: 356 IWD 358
+WD
Sbjct: 282 LWD 284
Score = 147 (56.8 bits), Expect = 8.4e-14, Sum P(3) = 8.4e-14
Identities = 37/140 (26%), Positives = 61/140 (43%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+ GH ++ A F G+Y+ T S D+ VKIW+M+ C + GH+ + D
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSR 142
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D ++++ + L+GH V F+P+ V +S S D + RIWD
Sbjct: 143 CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLV---VSGSFDESVRIWD 199
Query: 359 ARYSQFSPRIYIPRPSDAVA 378
+ + P SD V+
Sbjct: 200 VKTGMCIKTL--PAHSDPVS 217
Score = 143 (55.4 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 35/127 (27%), Positives = 60/127 (47%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ + GH+ V + R V++ SDD+ +KI+ + T+ + +GH +
Sbjct: 123 RTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQ 182
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D +R+W + G+ I L H+ V+A++F+ R GS+ + S S DG RI
Sbjct: 183 SSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFN-RDGSL--IASGSYDGLVRI 239
Query: 357 WDARYSQ 363
WD Q
Sbjct: 240 WDTANGQ 246
Score = 96 (38.9 bits), Expect = 8.4e-14, Sum P(3) = 8.4e-14
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 553 RFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA-GYDGKTIVW 610
+++++ DC+I +WN +V L GHT+ D HP IA A D K +W
Sbjct: 314 KWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 96 (38.9 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 30/126 (23%), Positives = 48/126 (38%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGD-ITDXXXX 294
IK + H + V F+R G + +GS D LV+IW C+ + E +
Sbjct: 206 IKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFS 265
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIA--FSPRPGSVYQLLSSSDDG 352
D +++W G + GH + I FS G ++S S+D
Sbjct: 266 PNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGK--WIISGSEDC 323
Query: 353 TCRIWD 358
IW+
Sbjct: 324 KIYIWN 329
Score = 75 (31.5 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 16/72 (22%), Positives = 36/72 (50%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVL--DVHPFNPRIAMS 600
V + +S + +++LA+ +D + +W+ + G + TGH S Y + + + +S
Sbjct: 259 VAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIIS 318
Query: 601 AGYDGKTIVWDI 612
D K +W++
Sbjct: 319 GSEDCKIYIWNL 330
Score = 75 (31.5 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 20/69 (28%), Positives = 33/69 (47%)
Query: 392 SHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQF 451
++ +FCC FN ++ V+GS D R+W+ + I L H + V+ V F
Sbjct: 171 NNYVFCCNFNPQSSLVVSGSFDESVRIWDV---------KTGMCIKTLPAHSDPVSAVSF 221
Query: 452 S--GCAVAS 458
+ G +AS
Sbjct: 222 NRDGSLIAS 230
Score = 67 (28.6 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 19/81 (23%), Positives = 33/81 (40%)
Query: 278 LASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSP 337
+ + GH I+ D +++W + + L GH V IA+S
Sbjct: 80 MCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSS 139
Query: 338 RPGSVYQLLSSSDDGTCRIWD 358
V +S+SDD T +I++
Sbjct: 140 DSRCV---VSASDDKTLKIFE 157
Score = 66 (28.3 bits), Expect = 8.4e-14, Sum P(3) = 8.4e-14
Identities = 26/97 (26%), Positives = 44/97 (45%)
Query: 392 SHQIFCCAFNANGTVFVTGSSDTLARVWNA----C-KPNTDDSDQPNHEIDVLSGHENDV 446
S + +FN +G++ +GS D L R+W+ C K DD + P + + N
Sbjct: 213 SDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPP---VAFVKFSPNG- 268
Query: 447 NYVQFSGCAVASRFSLADSSKEDSTPKF---KNSWFC 480
Y+ S + S L D SK + ++ +NS +C
Sbjct: 269 KYILASN--LDSTLKLWDFSKGKTLKQYTGHENSKYC 303
Score = 61 (26.5 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 17/81 (20%), Positives = 39/81 (48%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNP--RIAMS 600
V+ + ++ D + + D + +W+ A+G + +L E+ V V F+P + ++
Sbjct: 216 VSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDD-ENPPVAFVK-FSPNGKYILA 273
Query: 601 AGYDGKTIVWDIWEGIPIRIY 621
+ D +WD +G ++ Y
Sbjct: 274 SNLDSTLKLWDFSKGKTLKQY 294
Score = 37 (18.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 10/46 (21%), Positives = 17/46 (36%)
Query: 375 DAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
D G+ + + + IF G ++GS D +WN
Sbjct: 284 DFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWN 329
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 182 (69.1 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 38/124 (30%), Positives = 62/124 (50%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
++ GH N + F R++++ SDD+ +K+W +ET + + GH
Sbjct: 64 VQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP 123
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D +R+W + G + VL H+ VTA+ F+ R GS+ ++SSS DG CR
Sbjct: 124 QSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFN-RDGSL--IVSSSYDGLCR 180
Query: 356 IWDA 359
IWD+
Sbjct: 181 IWDS 184
Score = 137 (53.3 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 34/130 (26%), Positives = 54/130 (41%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
IK + GH N +C F+ +++GS D V+IW + T CL H +T
Sbjct: 106 IKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNR 165
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVL-RGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D + R+W G + L V+ + FSP G +L + D T
Sbjct: 166 DGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPN-GKF--ILVGTLDNTL 222
Query: 355 RIWDARYSQF 364
R+W+ ++F
Sbjct: 223 RLWNISSAKF 232
Score = 128 (50.1 bits), Expect = 0.00013, P = 0.00013
Identities = 33/120 (27%), Positives = 61/120 (50%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G++ + +S D RF+++A D + +W+ GSL+ +L GHT + ++ +P + I +S
Sbjct: 73 GISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMI-VSG 131
Query: 602 GYDGKTIVWDIWEG-----IPIR---IYEISRFRDGASIILSDDVGQLYILNTGQGESQK 653
+D +WD+ G +P + + RDG+ I+ S G I ++G G K
Sbjct: 132 SFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVK 191
Score = 126 (49.4 bits), Expect = 4.7e-09, Sum P(3) = 4.7e-09
Identities = 33/122 (27%), Positives = 52/122 (42%)
Query: 242 HRNAVYCAIFDRSGRYVITGSDDRLVKIWSMET-----AYCLASCRGHEGDITDXXXXXX 296
H AV F GR + + S D+ ++ +++ T A + GHE I+D
Sbjct: 23 HNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSD 82
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D +++W + G I L GHT + F+P+ + +S S D T RI
Sbjct: 83 ARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMI---VSGSFDETVRI 139
Query: 357 WD 358
WD
Sbjct: 140 WD 141
Score = 74 (31.1 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 15/72 (20%), Positives = 34/72 (47%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLD--VHPFNPRIAMS 600
V+ + +S + +F+L +D + +WN + + + TGH + Y + N + +S
Sbjct: 201 VSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVS 260
Query: 601 AGYDGKTIVWDI 612
D +W++
Sbjct: 261 GSEDNCVHMWEL 272
Score = 63 (27.2 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 553 RFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI-VW 610
R V + +C + +W L+ L GHTE+ + HP IA S D KT+ +W
Sbjct: 257 RIVSGSEDNC-VHMWELNSKKLLQKLEGHTETVMNVACHPTENLIA-SGSLD-KTVRIW 312
Score = 60 (26.2 bits), Expect = 4.7e-09, Sum P(3) = 4.7e-09
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 400 FNANGTVFVTGSSDTLARVWNA----C-KPNTDDSDQP 432
FN +G++ V+ S D L R+W++ C K DD + P
Sbjct: 163 FNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPP 200
Score = 49 (22.3 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 400 FNANGTVFVTGSSDTLARVWN 420
F+ NG + G+ D R+WN
Sbjct: 206 FSPNGKFILVGTLDNTLRLWN 226
Score = 42 (19.8 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 399 AFNA-NGTVFVTGSSDTLARVW 419
AF+ NG V+GS D +W
Sbjct: 249 AFSVTNGKRIVSGSEDNCVHMW 270
Score = 41 (19.5 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 20/82 (24%), Positives = 37/82 (45%)
Query: 536 ILPTPRG-VNMIVWSLDNRFVLAAIMD--CRICVWNAADGSLVHSLTGHTESTYVLDVHP 592
+LP V + ++ D ++++ D CRI W++ G V +L E+ V V
Sbjct: 150 VLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRI--WDSGTGHCVKTLIDD-ENPPVSFVR- 205
Query: 593 FNP--RIAMSAGYDGKTIVWDI 612
F+P + + D +W+I
Sbjct: 206 FSPNGKFILVGTLDNTLRLWNI 227
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 203 (76.5 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 58/194 (29%), Positives = 86/194 (44%)
Query: 203 IGGGFTRHH-RAPSIRAACYAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITG 261
I GF + R SI+A ++ K ST V+ R+ H VY F +Y+++
Sbjct: 339 IACGFQESYIRLWSIKADKKSLPK-STSVEDSDGSVRLLSHSGPVYGTTFSPDNKYLLSC 397
Query: 262 SDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPIS 321
S+D ++WS++T L + +GH G + D D ++W P+
Sbjct: 398 SEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLR 457
Query: 322 VLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYI--PRPSDAVA- 378
V GH + V + F P S Y L SSD TCR+WD S R++ +P AVA
Sbjct: 458 VFAGHLSDVDCVTF--HPNSAYVLTGSSDK-TCRLWDVHRGH-SVRVFNGHTQPVTAVAI 513
Query: 379 ---GRNMAPSSSAG 389
G MA + S G
Sbjct: 514 APDGHTMASADSEG 527
Score = 156 (60.0 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 37/147 (25%), Positives = 66/147 (44%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH + V C F + YV+TGS D+ ++W + + + GH +T
Sbjct: 461 GHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTM 520
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
+ +I +W + G I +RGH + +++FS R +V L+S D T R WD
Sbjct: 521 ASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFS-RESTV--LVSGGSDCTVRAWDVF 577
Query: 361 YSQFSPRIYIPRPSDAVAGRNMAPSSS 387
+ ++ + S ++ G + P S+
Sbjct: 578 KTNYNNPV-----SSSLTGSVVTPFSA 599
Score = 65 (27.9 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWNACKPN 425
I+ +F+ TV V+G SD R W+ K N
Sbjct: 550 IYSLSFSRESTVLVSGGSDCTVRAWDVFKTN 580
Score = 59 (25.8 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 15/72 (20%), Positives = 31/72 (43%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V + + D + +A + I +W+ G + ++ GH + Y L + +S G
Sbjct: 508 VTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSR-ESTVLVSGG 566
Query: 603 YDGKTIVWDIWE 614
D WD+++
Sbjct: 567 SDCTVRAWDVFK 578
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 175 (66.7 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 36/127 (28%), Positives = 63/127 (49%)
Query: 234 QNIKRVRGHRNAVYCAIFDRS-GRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
+ + + GHRN VY F+ G + TGS D+ K+WS+ET C + RGH +I
Sbjct: 125 EELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLS 184
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
D ++W + G + L GH+A + +++F+ G+ ++++ S D
Sbjct: 185 FNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTS-GN--RIITGSFDH 241
Query: 353 TCRIWDA 359
T +W+A
Sbjct: 242 TVTVWEA 248
Score = 171 (65.3 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 36/122 (29%), Positives = 59/122 (48%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
+ + GH + + + FD +G+ + T S D +I+S T C+ GHEG+I+
Sbjct: 296 VATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNP 355
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D R+W G + VL GHT + + AF+ + G + +++ S D TCR
Sbjct: 356 QGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYK-GDI--IITGSKDNTCR 412
Query: 356 IW 357
IW
Sbjct: 413 IW 414
Score = 163 (62.4 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
Identities = 36/123 (29%), Positives = 60/123 (48%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH + A+F+ ++TGS D+ K+W C+A+ GH+ +I D
Sbjct: 259 GHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLI 318
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
D R++ ++ L GH ++ I+F+P+ G+ +LL+ S D T RIWDA+
Sbjct: 319 ATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQ-GN--RLLTGSSDKTARIWDAQ 375
Query: 361 YSQ 363
Q
Sbjct: 376 TGQ 378
Score = 147 (56.8 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 32/120 (26%), Positives = 51/120 (42%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXX 299
RGH + C F+ V TGS D K+W +++ + + GH +I
Sbjct: 174 RGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNR 233
Query: 300 XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA 359
D + VW G + L GH A +++ F+ +L+ S D TC++WDA
Sbjct: 234 IITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFN---WDCSLILTGSMDKTCKLWDA 290
Score = 123 (48.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 32/130 (24%), Positives = 56/130 (43%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
+Q + + + GH + F+ SG +ITGS D V +W +T + + GH +I+
Sbjct: 206 IQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEIS 265
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D ++W +G ++ L GH + F G + + ++S
Sbjct: 266 SAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFD-YTGKL--IATAS 322
Query: 350 DDGTCRIWDA 359
DGT RI+ A
Sbjct: 323 ADGTARIFSA 332
Score = 119 (46.9 bits), Expect = 4.6e-08, Sum P(3) = 4.6e-08
Identities = 33/128 (25%), Positives = 52/128 (40%)
Query: 232 KMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDX 291
K K +R H + ++SG ITGS DR K+W + L + GH +
Sbjct: 81 KFYLFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAI 140
Query: 292 XXXX-XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSD 350
D ++W + G RGHTA + ++F+P+ V + S
Sbjct: 141 AFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLV---ATGSM 197
Query: 351 DGTCRIWD 358
D T ++WD
Sbjct: 198 DTTAKLWD 205
Score = 84 (34.6 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 394 QIFCCAFNANGTVFVTGSSDTLARVW 419
+IF CAFN G + +TGS D R+W
Sbjct: 389 EIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 78 (32.5 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 31/130 (23%), Positives = 56/130 (43%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLD-VHPFNPRIAMSA 601
++ V++ D +L MD +W+A +G V +LTGH + +LD + ++ +A
Sbjct: 264 ISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDE--ILDSCFDYTGKLIATA 321
Query: 602 GYDGKTIVWDI--------WEGIPIRIYEISRFRDGASIIL--SDDVGQLYILNTGQGES 651
DG ++ EG I +IS G ++ SD +++ TGQ
Sbjct: 322 SADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQ 381
Query: 652 QKDAKYDQFF 661
+ D+ F
Sbjct: 382 VLEGHTDEIF 391
Score = 76 (31.8 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 23/73 (31%), Positives = 36/73 (49%)
Query: 399 AFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVAS 458
+FN G +TGSSD AR+W+A Q + VL GH +++ FS CA
Sbjct: 352 SFNPQGNRLLTGSSDKTARIWDA---------QTGQCLQVLEGHTDEI----FS-CAFNY 397
Query: 459 RFSLADSSKEDST 471
+ + + +D+T
Sbjct: 398 KGDIIITGSKDNT 410
Score = 66 (28.3 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 16/57 (28%), Positives = 25/57 (43%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWD 611
V MD +W+ G V +LTGH+ L + RI ++ +D VW+
Sbjct: 192 VATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRI-ITGSFDHTVTVWE 247
Score = 60 (26.2 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 375 DAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNH 434
DAV G+ +A + G + C F+ G + T S+D AR+++A T +
Sbjct: 289 DAVNGKCVA--TLTGHDDEILDSC-FDYTGKLIATASADGTARIFSAA---TREC----- 337
Query: 435 EIDVLSGHENDVNYVQFS 452
+ L GHE +++ + F+
Sbjct: 338 -VTKLEGHEGEISKISFN 354
Score = 60 (26.2 bits), Expect = 4.6e-08, Sum P(3) = 4.6e-08
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 392 SHQIFCCAFNANGTVFVTGSSDTLARVWNA 421
S +I +FN +G +TGS D VW A
Sbjct: 219 SAEIISLSFNTSGNRIITGSFDHTVTVWEA 248
Score = 56 (24.8 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 16/64 (25%), Positives = 27/64 (42%)
Query: 552 NRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWD 611
NR + + D + VW A G V++L GH V ++ + ++ D +WD
Sbjct: 232 NRIITGSF-DHTVTVWEADTGRKVYTLIGHCAEISSA-VFNWDCSLILTGSMDKTCKLWD 289
Query: 612 IWEG 615
G
Sbjct: 290 AVNG 293
Score = 50 (22.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 394 QIFCCAFNANGTVFVTGSSDTLARVWNA 421
+I FN + ++ +TGS D ++W+A
Sbjct: 263 EISSAVFNWDCSLILTGSMDKTCKLWDA 290
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 174 (66.3 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 39/126 (30%), Positives = 59/126 (46%)
Query: 234 QNIKRVRGHRNAVYCAIFDRS-GRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
+ + + GHRN VY F+ G V TGS D+ K+WS ET C + RGH +I
Sbjct: 125 EELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLA 184
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
D ++W + G +S L GH A + ++ F+ G +L++ S D
Sbjct: 185 FNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTT-GD--RLVTGSFDH 241
Query: 353 TCRIWD 358
T +WD
Sbjct: 242 TAILWD 247
Score = 160 (61.4 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 35/124 (28%), Positives = 59/124 (47%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
Q + + GH + V F+ +G+ + T S D +++S +T CL GH+G+I+
Sbjct: 294 QCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCF 353
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D RVW + G + VL GH+ + + AF+ ++ ++ S D T
Sbjct: 354 NAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTI---ITGSKDNT 410
Query: 354 CRIW 357
CRIW
Sbjct: 411 CRIW 414
Score = 148 (57.2 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 32/124 (25%), Positives = 54/124 (43%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXX 299
RGH + C F+ V TGS D K+W +E+ +++ GH +I
Sbjct: 174 RGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDR 233
Query: 300 XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA 359
D +W +P G + VL GH ++ + F+ + ++S D +C++WDA
Sbjct: 234 LVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFN---WDCSLIATASLDKSCKVWDA 290
Query: 360 RYSQ 363
Q
Sbjct: 291 EGGQ 294
Score = 136 (52.9 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 32/117 (27%), Positives = 52/117 (44%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GHR + C F+ + T S D+ K+W E CLA+ GH ++ D
Sbjct: 259 GHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLI 318
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIW 357
D RV+ + L GH ++ + F+ + GS ++L++S D T R+W
Sbjct: 319 ATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQ-GS--RVLTASVDKTSRVW 372
Score = 124 (48.7 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 34/129 (26%), Positives = 53/129 (41%)
Query: 231 QKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
+K + ++ H + F++SG ITGS DR KIW + L + GH +
Sbjct: 80 RKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYA 139
Query: 291 XXXXX-XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D ++W G RGHTA + +AF+P+ V + S
Sbjct: 140 IAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLV---ATGS 196
Query: 350 DDGTCRIWD 358
D T ++WD
Sbjct: 197 MDTTAKLWD 205
Score = 111 (44.1 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 29/128 (22%), Positives = 55/128 (42%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
V+ + + + GH + F+ +G ++TGS D +W + + + GH G+I+
Sbjct: 206 VESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEIS 265
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D +VW G ++ L GH V + F+ G + + ++S
Sbjct: 266 CVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFN-YTGQL--IATAS 322
Query: 350 DDGTCRIW 357
DGT R++
Sbjct: 323 ADGTSRVF 330
Score = 85 (35.0 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 392 SHQIFCCAFNANGTVFVTGSSDTLARVWN 420
S +IF CAFN G +TGS D R+W+
Sbjct: 387 SDEIFSCAFNYEGDTIITGSKDNTCRIWH 415
Score = 70 (29.7 bits), Expect = 4.5e-11, Sum P(3) = 4.5e-11
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 536 ILPTPRG-VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDV-HPF 593
+L RG ++ + ++ D + A +D VW+A G + +L GH + VLDV +
Sbjct: 256 VLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDE--VLDVCFNY 313
Query: 594 NPRIAMSAGYDGKTIVW 610
++ +A DG + V+
Sbjct: 314 TGQLIATASADGTSRVF 330
Score = 54 (24.1 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 17/64 (26%), Positives = 28/64 (43%)
Query: 552 NRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWD 611
+R V + D +W+ G VH L+GH + + ++ + +A D VWD
Sbjct: 232 DRLVTGSF-DHTAILWDVPSGRKVHVLSGHRGEISCVQFN-WDCSLIATASLDKSCKVWD 289
Query: 612 IWEG 615
EG
Sbjct: 290 A-EG 292
Score = 53 (23.7 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 23/84 (27%), Positives = 39/84 (46%)
Query: 394 QIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS- 452
+I C FN + ++ T S D +VW+A + + L GH ++V V F+
Sbjct: 263 EISCVQFNWDCSLIATASLDKSCKVWDA---------EGGQCLATLLGHNDEVLDVCFNY 313
Query: 453 -GCAVASRFSLADSSKEDSTPKFK 475
G +A+ S +S+ ST F+
Sbjct: 314 TGQLIATA-SADGTSRVFSTDTFQ 336
Score = 52 (23.4 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 400 FNANGTVFVTGSSDTLARVW 419
FNA G+ +T S D +RVW
Sbjct: 353 FNAQGSRVLTASVDKTSRVW 372
Score = 47 (21.6 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTY 586
++ + ++ VL A +D VW G+ + L GH++ +
Sbjct: 348 ISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIF 391
Score = 38 (18.4 bits), Expect = 4.5e-11, Sum P(3) = 4.5e-11
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 1262 ADGSQRLNAQIDSTS 1276
A GS+ L A +D TS
Sbjct: 355 AQGSRVLTASVDKTS 369
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 177 (67.4 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 35/125 (28%), Positives = 58/125 (46%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
+N +++ GH VY F +Y+++ S+D+ V++WS++T L S +GH + D
Sbjct: 508 ENTRKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKF 567
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D R+W P+ + GH V + F P V+ + S D T
Sbjct: 568 SPLGHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVF---TGSSDKT 624
Query: 354 CRIWD 358
CR+WD
Sbjct: 625 CRMWD 629
Score = 169 (64.5 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 39/121 (32%), Positives = 58/121 (47%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH N V C F + YV TGS D+ ++W + T C+ GH +
Sbjct: 599 GHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWL 658
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHT-AAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA 359
D II VW + G + +RGH A++ ++AFS R G+V L+S D + R+WD
Sbjct: 659 ASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFS-RDGTV--LVSGCADNSVRVWDV 715
Query: 360 R 360
+
Sbjct: 716 K 716
Score = 139 (54.0 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 34/119 (28%), Positives = 50/119 (42%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXX 299
+GH V+ F G Y +T S D+ ++W+ + Y L GH D+
Sbjct: 556 KGHTQPVWDVKFSPLGHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNY 615
Query: 300 XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D R+W + G + V GHT +V +A SP G L S +DG +WD
Sbjct: 616 VFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSP-DGR--WLASGGEDGIICVWD 671
Score = 91 (37.1 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 31/107 (28%), Positives = 50/107 (46%)
Query: 375 DAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNH 434
D +GR + S G ++ AF+ +GTV V+G +D RVW+ K NT+D+ P
Sbjct: 671 DIGSGRRL--KSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWDV-KKNTNDAG-PEP 726
Query: 435 EIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDS--TPKFKNSWF 479
E + + N+ N S + SK++S T N++F
Sbjct: 727 EAFNNNVNGNETNSDGTSSTQQQQQPQQQQQSKKESIATSDHMNAFF 773
Score = 82 (33.9 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 19/70 (27%), Positives = 32/70 (45%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN + S D R++ + D ICVW+ G + S+ GH ++ + + +S
Sbjct: 646 VNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVSGC 705
Query: 603 YDGKTIVWDI 612
D VWD+
Sbjct: 706 ADNSVRVWDV 715
Score = 42 (19.8 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 1250 SDGTNRTSSDRGADGSQRLNAQIDSTSEH 1278
SDGT+ T + Q+ + +TS+H
Sbjct: 740 SDGTSSTQQQQQPQQQQQSKKESIATSDH 768
Score = 37 (18.1 bits), Expect = 4.4e-11, Sum P(3) = 4.4e-11
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1315 DRTNSEGDGGGVGESTLNANNNNFHESATDGSRRTR 1350
D + D G E+ N NN N +E+ +DG+ T+
Sbjct: 714 DVKKNTNDAGPEPEA-FN-NNVNGNETNSDGTSSTQ 747
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 168 (64.2 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 40/151 (26%), Positives = 71/151 (47%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAY-CLASCRGHEGDITDXXXX 294
I R GH + + + Y + SDD ++IW + Y CL RGH +
Sbjct: 78 IHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFN 137
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D IR+W + G + +++ H+ ++++ F+ R GS+ ++S+S DG+C
Sbjct: 138 PPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFN-RDGSL--IVSASHDGSC 194
Query: 355 RIWDARYSQFSPRIYIPRPSDAVAGRNMAPS 385
+IWDA+ + I S AV+ +P+
Sbjct: 195 KIWDAKEGTCLKTL-IDDKSPAVSFAKFSPN 224
Score = 166 (63.5 bits), Expect = 6.3e-13, Sum P(3) = 6.3e-13
Identities = 38/129 (29%), Positives = 61/129 (47%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
+++K + GH A+ C F G + + S D+ + +WS + GH I+D
Sbjct: 34 RHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAW 93
Query: 294 XXXXXXXXXXXXDCIIRVW--RLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDD 351
DC +R+W R P + VLRGHT V + F+P P ++ ++S S D
Sbjct: 94 SSDSHYTCSASDDCTLRIWDARSPYEC-LKVLRGHTNFVFCVNFNP-PSNL--IVSGSFD 149
Query: 352 GTCRIWDAR 360
T RIW+ +
Sbjct: 150 ETIRIWEVK 158
Score = 127 (49.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 32/135 (23%), Positives = 61/135 (45%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
+K +RGH N V+C F+ +++GS D ++IW ++T C+ + H I+
Sbjct: 121 LKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNR 180
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVL-RGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D ++W +G + L + AV+ FSP G +L ++ D T
Sbjct: 181 DGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPN-GKF--ILVATLDSTL 237
Query: 355 RIWDARYSQFSPRIY 369
++ + +F ++Y
Sbjct: 238 KLSNYATGKFL-KVY 251
Score = 77 (32.2 bits), Expect = 6.3e-13, Sum P(3) = 6.3e-13
Identities = 16/65 (24%), Positives = 35/65 (53%)
Query: 548 WSLDN-RFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGK 606
+S+ N +++++ D + +W+ +++ L GHT++ + HP I+ S + K
Sbjct: 265 FSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDK 324
Query: 607 TI-VW 610
TI +W
Sbjct: 325 TIRIW 329
Score = 75 (31.5 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 18/72 (25%), Positives = 33/72 (45%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLD--VHPFNPRIAMS 600
V+ +S + +F+L A +D + + N A G + TGHT + + N + +S
Sbjct: 216 VSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVS 275
Query: 601 AGYDGKTIVWDI 612
D +WD+
Sbjct: 276 GSEDNCVYLWDL 287
Score = 52 (23.4 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 392 SHQIFCC--AFNA-NGTVFVTGSSDTLARVWN 420
++++FC AF+ NG V+GS D +W+
Sbjct: 255 TNKVFCITSAFSVTNGKYIVSGSEDNCVYLWD 286
Score = 51 (23.0 bits), Expect = 6.3e-13, Sum P(3) = 6.3e-13
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 400 FNANGTVFVTGSSDTLARVWNA 421
FN +G++ V+ S D ++W+A
Sbjct: 178 FNRDGSLIVSASHDGSCKIWDA 199
Score = 42 (19.8 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 7/36 (19%), Positives = 21/36 (58%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSL 578
++ + ++ D +++A D +W+A +G+ + +L
Sbjct: 173 ISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTL 208
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 190 (71.9 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 40/142 (28%), Positives = 64/142 (45%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
K + GH VY F +Y+++GS+D+ V++WSM+T L S +GH + D
Sbjct: 519 KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPL 578
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D R+W P+ + GH V ++F P Y SSD TCR+
Sbjct: 579 GHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSF--HPNGCYVFTGSSDK-TCRM 635
Query: 357 WDARYSQFSPRIYIPRPSDAVA 378
WD S R+++ + ++
Sbjct: 636 WDVSTGD-SVRLFLGHTAPVIS 656
Score = 160 (61.4 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 38/127 (29%), Positives = 59/127 (46%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH N V C F +G YV TGS D+ ++W + T + GH +
Sbjct: 607 GHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWL 666
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTA-AVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA 359
D II VW + G + +RGH A+ ++++S + G+V L+S D T R+WD
Sbjct: 667 STGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYS-KEGNV--LISGGADHTVRVWDL 723
Query: 360 RYSQFSP 366
+ + P
Sbjct: 724 KKATTEP 730
Score = 143 (55.4 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 35/119 (29%), Positives = 51/119 (42%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXX 299
+GH + V+ F G Y T S D+ ++WS + Y L GH D+
Sbjct: 564 KGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCY 623
Query: 300 XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D R+W + G + + GHTA V +IA P G L + S+DG +WD
Sbjct: 624 VFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCP-DGR--WLSTGSEDGIINVWD 679
Score = 75 (31.5 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 24/101 (23%), Positives = 41/101 (40%)
Query: 389 GPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEI-----DVLSGHE 443
G + I+ +++ G V ++G +D RVW+ K T+ S +P+ DV +
Sbjct: 691 GHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLKKATTEPSAEPDEPFIGYLGDVTASIN 750
Query: 444 NDVNYVQFSGCAVASRFSLADSSKEDSTPKFKNSWFCHDNI 484
D+ + + L S TP FK F N+
Sbjct: 751 QDIKEYGRRRTVIPTS-DLVASFYTKKTPVFKVK-FSRSNL 789
Score = 74 (31.1 bits), Expect = 8.9e-13, Sum P(2) = 8.9e-13
Identities = 40/175 (22%), Positives = 74/175 (42%)
Query: 562 CRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIR-- 619
CR+ W+ + G V GHT + V P + R + DG VWDI G ++
Sbjct: 633 CRM--WDVSTGDSVRLFLGHTAPVISIAVCP-DGRWLSTGSEDGIINVWDIGTGKRLKQM 689
Query: 620 -------IYEISRFRDGASIILSDDVGQLYILNTGQGESQKDAKYDQFFLGDYRPLVQDT 672
IY +S ++G +I + + + + ++ A+ D+ F+G Y + D
Sbjct: 690 RGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLKKATTEPSAEPDEPFIG-Y---LGDV 745
Query: 673 YGNVLDQETQLAPHRRNLQDPLCDSAMIPYPE--P-YQTMYQQRRLGALGIEWRP 724
++ +Q+ + RR + P D Y + P ++ + + L G +RP
Sbjct: 746 TASI-NQDIKEYGRRRTVI-PTSDLVASFYTKKTPVFKVKFSRSNLALAGGAFRP 798
Score = 62 (26.9 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 17/63 (26%), Positives = 28/63 (44%)
Query: 551 DNRFVLAAIMDCRICVWNAADGSLVHSLTGHTEST-YVLDVHPFNPRIAMSAGYDGKTIV 609
D R++ D I VW+ G + + GH ++ Y L + + +S G D V
Sbjct: 662 DGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLS-YSKEGNVLISGGADHTVRV 720
Query: 610 WDI 612
WD+
Sbjct: 721 WDL 723
Score = 37 (18.1 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 403 NGTVFVTGSSDTLARVWN 420
+G TGS D + VW+
Sbjct: 662 DGRWLSTGSEDGIINVWD 679
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 173 (66.0 bits), Expect = 2.5e-12, Sum P(3) = 2.5e-12
Identities = 37/127 (29%), Positives = 62/127 (48%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
K + GH+ + + R +++GSDD+ +K+W + T L + +GH +
Sbjct: 108 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQ 167
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D +R+W + G + L H+ V+A+ F+ R GS+ ++SSS DG CRI
Sbjct: 168 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN-RDGSL--IVSSSYDGLCRI 224
Query: 357 WDARYSQ 363
WD Q
Sbjct: 225 WDTASGQ 231
Score = 158 (60.7 bits), Expect = 7.9e-13, Sum P(3) = 7.9e-13
Identities = 43/155 (27%), Positives = 68/155 (43%)
Query: 225 KPSTMVQKMQNIK-RVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRG 283
K S V+ +K + GH AV F +G ++ + S D+L+KIW + G
Sbjct: 53 KSSLSVKPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 112
Query: 284 HEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVY 343
H+ I+D D ++VW L G + L+GH+ V F+P+ +
Sbjct: 113 HKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLI- 171
Query: 344 QLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVA 378
+S S D + RIWD R + + P SD V+
Sbjct: 172 --VSGSFDESVRIWDVRTGKCLKTL--PAHSDPVS 202
Score = 151 (58.2 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 35/131 (26%), Positives = 62/131 (47%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
+++K ++GH N V+C F+ +++GS D V+IW + T CL + H ++
Sbjct: 147 KSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHF 206
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVL-RGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
D + R+W G + L V+ + FSP G Y +L+++ D
Sbjct: 207 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN-GK-Y-ILAATLDN 263
Query: 353 TCRIWDARYSQ 363
T ++WD YS+
Sbjct: 264 TLKLWD--YSK 272
Score = 122 (48.0 bits), Expect = 0.00040, Sum P(3) = 0.00040
Identities = 36/122 (29%), Positives = 60/122 (49%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPR--IAM 599
G++ + WS D+R +++ D + VW + G + +L GH S YV + FNP+ + +
Sbjct: 116 GISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGH--SNYVFCCN-FNPQSNLIV 172
Query: 600 SAGYDGKTIVWDIWEG-----IPIRIYEIS--RF-RDGASIILSDDVGQLYILNTGQGES 651
S +D +WD+ G +P +S F RDG+ I+ S G I +T G+
Sbjct: 173 SGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 232
Query: 652 QK 653
K
Sbjct: 233 LK 234
Score = 78 (32.5 bits), Expect = 7.9e-13, Sum P(3) = 7.9e-13
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 553 RFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI-VW 610
+++++ D + +WN +V L GHT++ HP IA +A + KTI +W
Sbjct: 299 KWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357
Score = 76 (31.8 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 15/72 (20%), Positives = 36/72 (50%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVL--DVHPFNPRIAMS 600
V+ + +S + +++LAA +D + +W+ + G + + TGH Y + + + +S
Sbjct: 244 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 303
Query: 601 AGYDGKTIVWDI 612
D +W++
Sbjct: 304 GSEDNMVYIWNL 315
Score = 61 (26.5 bits), Expect = 7.9e-13, Sum P(3) = 7.9e-13
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 400 FNANGTVFVTGSSDTLARVWNA----CKPNTDDSDQP 432
FN +G++ V+ S D L R+W+ C D D P
Sbjct: 206 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 242
Score = 54 (24.1 bits), Expect = 5.4e-09, Sum P(3) = 5.4e-09
Identities = 17/81 (20%), Positives = 35/81 (43%)
Query: 543 VNMIVWSLDNRFVLAAIMD--CRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
V+ + ++ D ++++ D CRI W+ A G + +L N + ++
Sbjct: 201 VSAVHFNRDGSLIVSSSYDGLCRI--WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 258
Query: 601 AGYDGKTIVWDIWEGIPIRIY 621
A D +WD +G ++ Y
Sbjct: 259 ATLDNTLKLWDYSKGKCLKTY 279
Score = 47 (21.6 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 1433 SLRKGSWLMLSTHEEGSRYIPQL-GDEVVYLRQGHQEYI 1470
S+ G W++ S E+ YI L EVV QGH + +
Sbjct: 294 SVTGGKWIV-SGSEDNMVYIWNLQSKEVVQKLQGHTDTV 331
Score = 45 (20.9 bits), Expect = 0.00040, Sum P(3) = 0.00040
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 384 PSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEID-VLSGH 442
P++ +GP S Q N+ G T SS++ A N + S +PN+ + L+GH
Sbjct: 23 PTAPSGPNSLQP-----NSVGQPGATTSSNSSAS--N----KSSLSVKPNYTLKFTLAGH 71
Query: 443 ENDVNYVQFS 452
V+ V+FS
Sbjct: 72 TKAVSAVKFS 81
Score = 44 (20.5 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 391 QSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
+ + IF G V+GS D + +WN
Sbjct: 285 EKYCIFANFSVTGGKWIVSGSEDNMVYIWN 314
Score = 39 (18.8 bits), Expect = 2.5e-12, Sum P(3) = 2.5e-12
Identities = 13/70 (18%), Positives = 29/70 (41%)
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASR 459
F+ NG + + D ++W+ K + +GH+N+ Y F+ +V
Sbjct: 249 FSPNGKYILAATLDNTLKLWDYSKGKC---------LKTYTGHKNE-KYCIFANFSVTGG 298
Query: 460 FSLADSSKED 469
+ S+++
Sbjct: 299 KWIVSGSEDN 308
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 171 (65.3 bits), Expect = 9.5e-13, Sum P(2) = 9.5e-13
Identities = 37/127 (29%), Positives = 59/127 (46%)
Query: 234 QNIKRVRGHRNAVYCAIFDRS-GRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
+ + + GHRN VY F+ G + TGS D+ K+WS ET C + RGH +I
Sbjct: 125 EELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLS 184
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
D ++W + G + L GH A + +++F G ++++ S D
Sbjct: 185 FNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTS-GD--RIITGSFDH 241
Query: 353 TCRIWDA 359
T +WDA
Sbjct: 242 TVVVWDA 248
Score = 167 (63.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 33/122 (27%), Positives = 61/122 (50%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
+ + GH + + + FD +G+ + T S D ++++ T C+ GHEG+I+
Sbjct: 296 VATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNP 355
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D R+W + G + VL GHT + + AF+ + G++ +++ S D +CR
Sbjct: 356 QGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYK-GNI--VITGSKDNSCR 412
Query: 356 IW 357
IW
Sbjct: 413 IW 414
Score = 158 (60.7 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 36/123 (29%), Positives = 58/123 (47%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH + A+F ++TGS D+ +W + C+A+ GH+ +I D
Sbjct: 259 GHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLI 318
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
D RV+ I+ L GH ++ I+F+P+ G+ +LL+ S D T RIWD +
Sbjct: 319 ATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQ-GN--RLLTGSSDKTARIWDVQ 375
Query: 361 YSQ 363
Q
Sbjct: 376 TGQ 378
Score = 142 (55.0 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 33/120 (27%), Positives = 50/120 (41%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXX 299
RGH + C F+ V TGS D K+W +++ + + GH +I
Sbjct: 174 RGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDR 233
Query: 300 XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA 359
D + VW G + L GH A +++ FS +L+ S D TC +WDA
Sbjct: 234 IITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFS---WDCSLILTGSMDKTCMLWDA 290
Score = 122 (48.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 32/130 (24%), Positives = 54/130 (41%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
+Q + + + GH + FD SG +ITGS D V +W T + + GH +I+
Sbjct: 206 IQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEIS 265
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D +W G ++ L GH + F G + + ++S
Sbjct: 266 SALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFD-YTGKL--IATAS 322
Query: 350 DDGTCRIWDA 359
DGT R+++A
Sbjct: 323 ADGTARVYNA 332
Score = 114 (45.2 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 31/123 (25%), Positives = 50/123 (40%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX- 295
K +R H + +++G ITGS DR K+W + L + GH +
Sbjct: 86 KVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNP 145
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D ++W G RGHTA + ++F+P+ V + S D T +
Sbjct: 146 YGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVV---ATGSMDTTAK 202
Query: 356 IWD 358
+WD
Sbjct: 203 LWD 205
Score = 86 (35.3 bits), Expect = 4.0e-07, Sum P(3) = 4.0e-07
Identities = 23/84 (27%), Positives = 33/84 (39%)
Query: 276 YCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAF 335
Y R H +T+ D +VW G + L GH V AIAF
Sbjct: 83 YLFKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAF 142
Query: 336 SPRPGSVYQLLSSSDDGTCRIWDA 359
+ G ++ + S D TC++W A
Sbjct: 143 NNPYGD--KIATGSFDKTCKLWSA 164
Score = 84 (34.6 bits), Expect = 9.5e-13, Sum P(2) = 9.5e-13
Identities = 32/130 (24%), Positives = 57/130 (43%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLD-VHPFNPRIAMSA 601
++ ++S D +L MD +W+A G V +LTGH + +LD + ++ +A
Sbjct: 264 ISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDE--ILDSCFDYTGKLIATA 321
Query: 602 GYDGKTIVWDIW--------EGIPIRIYEISRFRDGASIIL--SDDVGQLYILNTGQGES 651
DG V++ EG I +IS G ++ SD +++ + TGQ
Sbjct: 322 SADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQ 381
Query: 652 QKDAKYDQFF 661
+ D+ F
Sbjct: 382 VLEGHTDEIF 391
Score = 83 (34.3 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 394 QIFCCAFNANGTVFVTGSSDTLARVW 419
+IF CAFN G + +TGS D R+W
Sbjct: 389 EIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 80 (33.2 bits), Expect = 4.0e-07, Sum P(3) = 4.0e-07
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 394 QIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQF 451
+I C +FN TV TGS DT A++W+ Q E+ L+GH ++ + F
Sbjct: 179 EIVCLSFNPQSTVVATGSMDTTAKLWDI---------QSGEEVVTLTGHLAEIISLSF 227
Score = 70 (29.7 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 399 AFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVAS 458
+FN G +TGSSD AR+W+ Q + VL GH +++ FS CA
Sbjct: 352 SFNPQGNRLLTGSSDKTARIWDV---------QTGQCLQVLEGHTDEI----FS-CAFNY 397
Query: 459 RFSLADSSKEDST 471
+ ++ + +D++
Sbjct: 398 KGNIVITGSKDNS 410
Score = 70 (29.7 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 18/61 (29%), Positives = 25/61 (40%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWE 614
V MD +W+ G V +LTGH L RI ++ +D +VWD
Sbjct: 192 VATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRI-ITGSFDHTVVVWDAST 250
Query: 615 G 615
G
Sbjct: 251 G 251
Score = 69 (29.3 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGH-TESTYVLDVHPFNPRIAMSAGYDGKTIVWDIW 613
++ D + VW+A+ G VH+L GH E + L ++ + ++ D ++WD
Sbjct: 234 IITGSFDHTVVVWDASTGRKVHTLIGHCAEISSAL--FSWDCSLILTGSMDKTCMLWDAT 291
Query: 614 EG 615
G
Sbjct: 292 SG 293
Score = 65 (27.9 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 22/78 (28%), Positives = 36/78 (46%)
Query: 375 DAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNH 434
DA +G+ +A + G + C F+ G + T S+D ARV+NA
Sbjct: 289 DATSGKCVA--TLTGHDDEILDSC-FDYTGKLIATASADGTARVYNATTRKC-------- 337
Query: 435 EIDVLSGHENDVNYVQFS 452
I L GHE +++ + F+
Sbjct: 338 -ITKLEGHEGEISKISFN 354
Score = 51 (23.0 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 394 QIFCCAFNANGTVFVTGSSDTLARVWNA 421
+I +F+ +G +TGS D VW+A
Sbjct: 221 EIISLSFDTSGDRIITGSFDHTVVVWDA 248
Score = 41 (19.5 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 394 QIFCCAFNANGTVFVTGSSDTLARVWNA 421
+I F+ + ++ +TGS D +W+A
Sbjct: 263 EISSALFSWDCSLILTGSMDKTCMLWDA 290
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 183 (69.5 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 41/125 (32%), Positives = 59/125 (47%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
Q ++ GH V C F + YV TGS DR V++W + C+ GH+G I
Sbjct: 574 QPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAF 633
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D + +W + GL I+ L+GHT + A+ FS R G + + S S D T
Sbjct: 634 SPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFS-RDGEI--IASGSIDNT 690
Query: 354 CRIWD 358
R+WD
Sbjct: 691 VRLWD 695
Score = 170 (64.9 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 36/122 (29%), Positives = 55/122 (45%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
K + GH VY F Y+++ S+D +++WS++T CL +GH + D
Sbjct: 493 KILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPF 552
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D + R+W P+ + GH A VT F P S Y + + S D T R+
Sbjct: 553 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRF--HPNSNY-VATGSSDRTVRL 609
Query: 357 WD 358
WD
Sbjct: 610 WD 611
Score = 147 (56.8 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 33/119 (27%), Positives = 53/119 (44%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXX 299
+GH V+ F G Y ++G DR+ ++W+ + L GH D+T
Sbjct: 538 KGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNY 597
Query: 300 XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D +R+W + +G + + GH + ++AFSP G L S S DG +WD
Sbjct: 598 VATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPN-GKF--LASGSTDGRVLLWD 653
Score = 96 (38.9 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 27/96 (28%), Positives = 43/96 (44%)
Query: 551 DNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVW 610
++ +V D + +W+ +G+ V TGH + L P N + S DG+ ++W
Sbjct: 594 NSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSP-NGKFLASGSTDGRVLLW 652
Query: 611 DIWEGIPIR--------IYEISRFRDGASIILSDDV 638
DI G+ I IY + RDG II S +
Sbjct: 653 DIGHGLMIAELKGHTGTIYALKFSRDG-EIIASGSI 687
Score = 90 (36.7 bits), Expect = 9.3e-12, Sum P(3) = 9.3e-12
Identities = 27/109 (24%), Positives = 45/109 (41%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
++ + +S + +F+ + D R+ +W+ G ++ L GHT + Y L IA S
Sbjct: 628 IHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIA-SGS 686
Query: 603 YDGKTIVWDIWEGIPIRIYEISRFRDGASIILSDDVGQLYILNTGQGES 651
D +WD+ I E F I D Q +L T +S
Sbjct: 687 IDNTVRLWDVMRAIDD--VETDDFTAATGHIHLPDNSQELLLGTYHSKS 733
Score = 57 (25.1 bits), Expect = 5.5e-08, Sum P(4) = 5.5e-08
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGH 442
I+ F+ +G + +GS D R+W+ + DD + + +GH
Sbjct: 670 IYALKFSRDGEIIASGSIDNTVRLWDVMRA-IDDVE--TDDFTAATGH 714
Score = 46 (21.3 bits), Expect = 6.4e-07, Sum P(4) = 6.4e-07
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWN 420
I AF+ NG +GS+D +W+
Sbjct: 628 IHSLAFSPNGKFLASGSTDGRVLLWD 653
Score = 42 (19.8 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 22/79 (27%), Positives = 30/79 (37%)
Query: 50 REVYFLIMHFLSTGPCHRTYGQFWNELLEHQLL------PRRYHAWYSRSGLPSGDENDD 103
R+ Y L+ L R Q WN + EH + PR S SG +G+ +
Sbjct: 267 RDSYQLLKRHLQ----ERQNNQIWNIIQEHLYIDIFDGMPRSKSQIDSMSGSLAGEARRE 322
Query: 104 GMSFPLSYNKLVERYPHIE 122
+ Y L E P IE
Sbjct: 323 VNKVKVFYGLLKE--PEIE 339
Score = 39 (18.8 bits), Expect = 5.5e-08, Sum P(4) = 5.5e-08
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 579 TGHTESTYVLDVHPFNPRIAMSAG 602
T H++ST V+ +H + ++AG
Sbjct: 728 TYHSKSTAVIHLHFTRRNLLLAAG 751
Score = 38 (18.4 bits), Expect = 5.9e-12, Sum P(3) = 5.9e-12
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 139 SPSRAMIGGDAPNAADVPTLLGRGSFS 165
S + A GG +A D TLL R S +
Sbjct: 105 SHTDAGAGGKDGDAGDTKTLLSRVSIA 131
Score = 37 (18.1 bits), Expect = 7.4e-12, Sum P(3) = 7.4e-12
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 137 TSSPSRAMIGGDAPNAADVPTLL 159
+SSP A AP D TLL
Sbjct: 52 SSSPLTAAPAAGAPKPEDQQTLL 74
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 169 (64.5 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 36/127 (28%), Positives = 61/127 (48%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
K + GH+ + + +++ SDD+ +KIW + + CL + +GH +
Sbjct: 55 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 114
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D +R+W + G + L H+ V+A+ F+ R GS+ ++SSS DG CRI
Sbjct: 115 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSL--IVSSSYDGLCRI 171
Query: 357 WDARYSQ 363
WD Q
Sbjct: 172 WDTASGQ 178
Score = 150 (57.9 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 35/129 (27%), Positives = 61/129 (47%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
+K ++GH N V+C F+ +++GS D V+IW ++T CL + H ++
Sbjct: 96 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 155
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVL-RGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D + R+W G + L V+ + FSP G Y +L+++ D T
Sbjct: 156 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN-GK-Y-ILAATLDNTL 212
Query: 355 RIWDARYSQ 363
++WD YS+
Sbjct: 213 KLWD--YSK 219
Score = 144 (55.7 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 36/138 (26%), Positives = 61/138 (44%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH AV F +G ++ + S D+L+KIW + GH+ I+D
Sbjct: 17 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 76
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
D +++W + G + L+GH+ V F+P+ + +S S D + RIWD +
Sbjct: 77 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI---VSGSFDESVRIWDVK 133
Query: 361 YSQFSPRIYIPRPSDAVA 378
+ + P SD V+
Sbjct: 134 TGKCLKTL--PAHSDPVS 149
Score = 124 (48.7 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 35/122 (28%), Positives = 61/122 (50%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPR--IAM 599
G++ + WS D+ +++A D + +W+ + G + +L GH S YV + FNP+ + +
Sbjct: 63 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH--SNYVFCCN-FNPQSNLIV 119
Query: 600 SAGYDGKTIVWDIWEG-----IPIRIYEIS--RF-RDGASIILSDDVGQLYILNTGQGES 651
S +D +WD+ G +P +S F RDG+ I+ S G I +T G+
Sbjct: 120 SGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 179
Query: 652 QK 653
K
Sbjct: 180 LK 181
Score = 81 (33.6 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 392 SHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHEN 444
S+ +FCC FN + V+GS D R+W+ K P H V + H N
Sbjct: 103 SNYVFCCNFNPQSNLIVSGSFDESVRIWDV-KTGKCLKTLPAHSDPVSAVHFN 154
Score = 75 (31.5 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 15/72 (20%), Positives = 36/72 (50%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVL--DVHPFNPRIAMS 600
V+ + +S + +++LAA +D + +W+ + G + + TGH Y + + + +S
Sbjct: 191 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 250
Query: 601 AGYDGKTIVWDI 612
D +W++
Sbjct: 251 GSEDNLVYIWNL 262
Score = 73 (30.8 bits), Expect = 5.3e-12, Sum P(3) = 5.3e-12
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 553 RFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI-VW 610
+++++ D + +WN +V L GHT+ HP IA +A + KTI +W
Sbjct: 246 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 304
Score = 73 (30.8 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 323 LRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRI 368
L GHT AV+++ FSP G L SSS D +IW A +F I
Sbjct: 15 LAGHTKAVSSVKFSPN-GE--WLASSSADKLIKIWGAYDGKFEKTI 57
Score = 61 (26.5 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 400 FNANGTVFVTGSSDTLARVWNA----CKPNTDDSDQP 432
FN +G++ V+ S D L R+W+ C D D P
Sbjct: 153 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 189
Score = 54 (24.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 17/81 (20%), Positives = 35/81 (43%)
Query: 543 VNMIVWSLDNRFVLAAIMD--CRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
V+ + ++ D ++++ D CRI W+ A G + +L N + ++
Sbjct: 148 VSAVHFNRDGSLIVSSSYDGLCRI--WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 205
Query: 601 AGYDGKTIVWDIWEGIPIRIY 621
A D +WD +G ++ Y
Sbjct: 206 ATLDNTLKLWDYSKGKCLKTY 226
Score = 46 (21.3 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 391 QSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
+ + IF G V+GS D L +WN
Sbjct: 232 EKYCIFANFSVTGGKWIVSGSEDNLVYIWN 261
Score = 39 (18.8 bits), Expect = 5.3e-12, Sum P(3) = 5.3e-12
Identities = 13/70 (18%), Positives = 29/70 (41%)
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASR 459
F+ NG + + D ++W+ K + +GH+N+ Y F+ +V
Sbjct: 196 FSPNGKYILAATLDNTLKLWDYSKGKC---------LKTYTGHKNE-KYCIFANFSVTGG 245
Query: 460 FSLADSSKED 469
+ S+++
Sbjct: 246 KWIVSGSEDN 255
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 169 (64.5 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 36/127 (28%), Positives = 61/127 (48%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
K + GH+ + + +++ SDD+ +KIW + + CL + +GH +
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D +R+W + G + L H+ V+A+ F+ R GS+ ++SSS DG CRI
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSL--IVSSSYDGLCRI 197
Query: 357 WDARYSQ 363
WD Q
Sbjct: 198 WDTASGQ 204
Score = 152 (58.6 bits), Expect = 4.4e-12, Sum P(3) = 4.4e-12
Identities = 45/172 (26%), Positives = 75/172 (43%)
Query: 208 TRHHRAPSIRAACYAIAKPSTMVQKMQNIK-RVRGHRNAVYCAIFDRSGRYVITGSDDRL 266
T RA +A +KP T V+ +K + GH AV F +G ++ + S D+L
Sbjct: 10 TEAARAQPAPSAAATQSKP-TPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKL 68
Query: 267 VKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGH 326
+KIW + GH+ I+D D +++W + G + L+GH
Sbjct: 69 IKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 128
Query: 327 TAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVA 378
+ V F+P+ + +S S D + RIWD + + + P SD V+
Sbjct: 129 SNYVFCCNFNPQSNLI---VSGSFDESVRIWDVKTGKCLKTL--PAHSDPVS 175
Score = 150 (57.9 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 35/129 (27%), Positives = 61/129 (47%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
+K ++GH N V+C F+ +++GS D V+IW ++T CL + H ++
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVL-RGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D + R+W G + L V+ + FSP G Y +L+++ D T
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN-GK-Y-ILAATLDNTL 238
Query: 355 RIWDARYSQ 363
++WD YS+
Sbjct: 239 KLWD--YSK 245
Score = 75 (31.5 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 15/72 (20%), Positives = 36/72 (50%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVL--DVHPFNPRIAMS 600
V+ + +S + +++LAA +D + +W+ + G + + TGH Y + + + +S
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 601 AGYDGKTIVWDI 612
D +W++
Sbjct: 277 GSEDNLVYIWNL 288
Score = 73 (30.8 bits), Expect = 7.0e-12, Sum P(3) = 7.0e-12
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 553 RFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI-VW 610
+++++ D + +WN +V L GHT+ HP IA +A + KTI +W
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 61 (26.5 bits), Expect = 4.4e-12, Sum P(3) = 4.4e-12
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 400 FNANGTVFVTGSSDTLARVWNA----CKPNTDDSDQP 432
FN +G++ V+ S D L R+W+ C D D P
Sbjct: 179 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 215
Score = 54 (24.1 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 17/81 (20%), Positives = 35/81 (43%)
Query: 543 VNMIVWSLDNRFVLAAIMD--CRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
V+ + ++ D ++++ D CRI W+ A G + +L N + ++
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRI--WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 231
Query: 601 AGYDGKTIVWDIWEGIPIRIY 621
A D +WD +G ++ Y
Sbjct: 232 ATLDNTLKLWDYSKGKCLKTY 252
Score = 46 (21.3 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 391 QSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
+ + IF G V+GS D L +WN
Sbjct: 258 EKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Score = 39 (18.8 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 13/70 (18%), Positives = 29/70 (41%)
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASR 459
F+ NG + + D ++W+ K + +GH+N+ Y F+ +V
Sbjct: 222 FSPNGKYILAATLDNTLKLWDYSKGKC---------LKTYTGHKNE-KYCIFANFSVTGG 271
Query: 460 FSLADSSKED 469
+ S+++
Sbjct: 272 KWIVSGSEDN 281
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 169 (64.5 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 36/127 (28%), Positives = 61/127 (48%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
K + GH+ + + +++ SDD+ +KIW + + CL + +GH +
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D +R+W + G + L H+ V+A+ F+ R GS+ ++SSS DG CRI
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSL--IVSSSYDGLCRI 197
Query: 357 WDARYSQ 363
WD Q
Sbjct: 198 WDTASGQ 204
Score = 150 (57.9 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 35/129 (27%), Positives = 61/129 (47%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
+K ++GH N V+C F+ +++GS D V+IW ++T CL + H ++
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVL-RGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D + R+W G + L V+ + FSP G Y +L+++ D T
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN-GK-Y-ILAATLDNTL 238
Query: 355 RIWDARYSQ 363
++WD YS+
Sbjct: 239 KLWD--YSK 245
Score = 148 (57.2 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 44/172 (25%), Positives = 75/172 (43%)
Query: 208 TRHHRAPSIRAACYAIAKPSTMVQKMQNIK-RVRGHRNAVYCAIFDRSGRYVITGSDDRL 266
T RA ++ +KP T V+ +K + GH AV F +G ++ + S D+L
Sbjct: 10 TEAARAQPTPSSSATQSKP-TPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKL 68
Query: 267 VKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGH 326
+KIW + GH+ I+D D +++W + G + L+GH
Sbjct: 69 IKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 128
Query: 327 TAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVA 378
+ V F+P+ + +S S D + RIWD + + + P SD V+
Sbjct: 129 SNYVFCCNFNPQSNLI---VSGSFDESVRIWDVKTGKCLKTL--PAHSDPVS 175
Score = 75 (31.5 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 15/72 (20%), Positives = 36/72 (50%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVL--DVHPFNPRIAMS 600
V+ + +S + +++LAA +D + +W+ + G + + TGH Y + + + +S
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 601 AGYDGKTIVWDI 612
D +W++
Sbjct: 277 GSEDNLVYIWNL 288
Score = 73 (30.8 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 553 RFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI-VW 610
+++++ D + +WN +V L GHT+ HP IA +A + KTI +W
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 61 (26.5 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 400 FNANGTVFVTGSSDTLARVWNA----CKPNTDDSDQP 432
FN +G++ V+ S D L R+W+ C D D P
Sbjct: 179 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 215
Score = 54 (24.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 17/81 (20%), Positives = 35/81 (43%)
Query: 543 VNMIVWSLDNRFVLAAIMD--CRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
V+ + ++ D ++++ D CRI W+ A G + +L N + ++
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRI--WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 231
Query: 601 AGYDGKTIVWDIWEGIPIRIY 621
A D +WD +G ++ Y
Sbjct: 232 ATLDNTLKLWDYSKGKCLKTY 252
Score = 46 (21.3 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 391 QSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
+ + IF G V+GS D L +WN
Sbjct: 258 EKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Score = 39 (18.8 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 13/70 (18%), Positives = 29/70 (41%)
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASR 459
F+ NG + + D ++W+ K + +GH+N+ Y F+ +V
Sbjct: 222 FSPNGKYILAATLDNTLKLWDYSKGKC---------LKTYTGHKNE-KYCIFANFSVTGG 271
Query: 460 FSLADSSKED 469
+ S+++
Sbjct: 272 KWIVSGSEDN 281
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 169 (64.5 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 36/127 (28%), Positives = 61/127 (48%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
K + GH+ + + +++ SDD+ +KIW + + CL + +GH +
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D +R+W + G + L H+ V+A+ F+ R GS+ ++SSS DG CRI
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSL--IVSSSYDGLCRI 197
Query: 357 WDARYSQ 363
WD Q
Sbjct: 198 WDTASGQ 204
Score = 150 (57.9 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 35/129 (27%), Positives = 61/129 (47%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
+K ++GH N V+C F+ +++GS D V+IW ++T CL + H ++
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVL-RGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D + R+W G + L V+ + FSP G Y +L+++ D T
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN-GK-Y-ILAATLDNTL 238
Query: 355 RIWDARYSQ 363
++WD YS+
Sbjct: 239 KLWD--YSK 245
Score = 148 (57.2 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 44/172 (25%), Positives = 75/172 (43%)
Query: 208 TRHHRAPSIRAACYAIAKPSTMVQKMQNIK-RVRGHRNAVYCAIFDRSGRYVITGSDDRL 266
T RA ++ +KP T V+ +K + GH AV F +G ++ + S D+L
Sbjct: 10 TEAARAQPTPSSSATQSKP-TPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKL 68
Query: 267 VKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGH 326
+KIW + GH+ I+D D +++W + G + L+GH
Sbjct: 69 IKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 128
Query: 327 TAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVA 378
+ V F+P+ + +S S D + RIWD + + + P SD V+
Sbjct: 129 SNYVFCCNFNPQSNLI---VSGSFDESVRIWDVKTGKCLKTL--PAHSDPVS 175
Score = 75 (31.5 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 15/72 (20%), Positives = 36/72 (50%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVL--DVHPFNPRIAMS 600
V+ + +S + +++LAA +D + +W+ + G + + TGH Y + + + +S
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 601 AGYDGKTIVWDI 612
D +W++
Sbjct: 277 GSEDNLVYIWNL 288
Score = 73 (30.8 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 553 RFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI-VW 610
+++++ D + +WN +V L GHT+ HP IA +A + KTI +W
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 61 (26.5 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 400 FNANGTVFVTGSSDTLARVWNA----CKPNTDDSDQP 432
FN +G++ V+ S D L R+W+ C D D P
Sbjct: 179 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 215
Score = 54 (24.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 17/81 (20%), Positives = 35/81 (43%)
Query: 543 VNMIVWSLDNRFVLAAIMD--CRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
V+ + ++ D ++++ D CRI W+ A G + +L N + ++
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRI--WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 231
Query: 601 AGYDGKTIVWDIWEGIPIRIY 621
A D +WD +G ++ Y
Sbjct: 232 ATLDNTLKLWDYSKGKCLKTY 252
Score = 46 (21.3 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 391 QSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
+ + IF G V+GS D L +WN
Sbjct: 258 EKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Score = 39 (18.8 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 13/70 (18%), Positives = 29/70 (41%)
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASR 459
F+ NG + + D ++W+ K + +GH+N+ Y F+ +V
Sbjct: 222 FSPNGKYILAATLDNTLKLWDYSKGKC---------LKTYTGHKNE-KYCIFANFSVTGG 271
Query: 460 FSLADSSKED 469
+ S+++
Sbjct: 272 KWIVSGSEDN 281
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 169 (64.5 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 36/127 (28%), Positives = 61/127 (48%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
K + GH+ + + +++ SDD+ +KIW + + CL + +GH +
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D +R+W + G + L H+ V+A+ F+ R GS+ ++SSS DG CRI
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSL--IVSSSYDGLCRI 197
Query: 357 WDARYSQ 363
WD Q
Sbjct: 198 WDTASGQ 204
Score = 150 (57.9 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 35/129 (27%), Positives = 61/129 (47%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
+K ++GH N V+C F+ +++GS D V+IW ++T CL + H ++
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVL-RGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D + R+W G + L V+ + FSP G Y +L+++ D T
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN-GK-Y-ILAATLDNTL 238
Query: 355 RIWDARYSQ 363
++WD YS+
Sbjct: 239 KLWD--YSK 245
Score = 148 (57.2 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 44/172 (25%), Positives = 75/172 (43%)
Query: 208 TRHHRAPSIRAACYAIAKPSTMVQKMQNIK-RVRGHRNAVYCAIFDRSGRYVITGSDDRL 266
T RA ++ +KP T V+ +K + GH AV F +G ++ + S D+L
Sbjct: 10 TEAARAQPTPSSSATQSKP-TPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKL 68
Query: 267 VKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGH 326
+KIW + GH+ I+D D +++W + G + L+GH
Sbjct: 69 IKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 128
Query: 327 TAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVA 378
+ V F+P+ + +S S D + RIWD + + + P SD V+
Sbjct: 129 SNYVFCCNFNPQSNLI---VSGSFDESVRIWDVKTGKCLKTL--PAHSDPVS 175
Score = 75 (31.5 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 15/72 (20%), Positives = 36/72 (50%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVL--DVHPFNPRIAMS 600
V+ + +S + +++LAA +D + +W+ + G + + TGH Y + + + +S
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 601 AGYDGKTIVWDI 612
D +W++
Sbjct: 277 GSEDNLVYIWNL 288
Score = 73 (30.8 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 553 RFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI-VW 610
+++++ D + +WN +V L GHT+ HP IA +A + KTI +W
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 61 (26.5 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 400 FNANGTVFVTGSSDTLARVWNA----CKPNTDDSDQP 432
FN +G++ V+ S D L R+W+ C D D P
Sbjct: 179 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 215
Score = 54 (24.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 17/81 (20%), Positives = 35/81 (43%)
Query: 543 VNMIVWSLDNRFVLAAIMD--CRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
V+ + ++ D ++++ D CRI W+ A G + +L N + ++
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRI--WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 231
Query: 601 AGYDGKTIVWDIWEGIPIRIY 621
A D +WD +G ++ Y
Sbjct: 232 ATLDNTLKLWDYSKGKCLKTY 252
Score = 46 (21.3 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 391 QSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
+ + IF G V+GS D L +WN
Sbjct: 258 EKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Score = 39 (18.8 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 13/70 (18%), Positives = 29/70 (41%)
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASR 459
F+ NG + + D ++W+ K + +GH+N+ Y F+ +V
Sbjct: 222 FSPNGKYILAATLDNTLKLWDYSKGKC---------LKTYTGHKNE-KYCIFANFSVTGG 271
Query: 460 FSLADSSKED 469
+ S+++
Sbjct: 272 KWIVSGSEDN 281
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 169 (64.5 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 36/127 (28%), Positives = 61/127 (48%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
K + GH+ + + +++ SDD+ +KIW + + CL + +GH +
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D +R+W + G + L H+ V+A+ F+ R GS+ ++SSS DG CRI
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSL--IVSSSYDGLCRI 197
Query: 357 WDARYSQ 363
WD Q
Sbjct: 198 WDTASGQ 204
Score = 150 (57.9 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 35/129 (27%), Positives = 61/129 (47%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
+K ++GH N V+C F+ +++GS D V+IW ++T CL + H ++
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVL-RGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D + R+W G + L V+ + FSP G Y +L+++ D T
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN-GK-Y-ILAATLDNTL 238
Query: 355 RIWDARYSQ 363
++WD YS+
Sbjct: 239 KLWD--YSK 245
Score = 148 (57.2 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 44/172 (25%), Positives = 75/172 (43%)
Query: 208 TRHHRAPSIRAACYAIAKPSTMVQKMQNIK-RVRGHRNAVYCAIFDRSGRYVITGSDDRL 266
T RA ++ +KP T V+ +K + GH AV F +G ++ + S D+L
Sbjct: 10 TEAARAQPTPSSSATQSKP-TPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKL 68
Query: 267 VKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGH 326
+KIW + GH+ I+D D +++W + G + L+GH
Sbjct: 69 IKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 128
Query: 327 TAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVA 378
+ V F+P+ + +S S D + RIWD + + + P SD V+
Sbjct: 129 SNYVFCCNFNPQSNLI---VSGSFDESVRIWDVKTGKCLKTL--PAHSDPVS 175
Score = 75 (31.5 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 15/72 (20%), Positives = 36/72 (50%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVL--DVHPFNPRIAMS 600
V+ + +S + +++LAA +D + +W+ + G + + TGH Y + + + +S
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 601 AGYDGKTIVWDI 612
D +W++
Sbjct: 277 GSEDNLVYIWNL 288
Score = 73 (30.8 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 553 RFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI-VW 610
+++++ D + +WN +V L GHT+ HP IA +A + KTI +W
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 61 (26.5 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 400 FNANGTVFVTGSSDTLARVWNA----CKPNTDDSDQP 432
FN +G++ V+ S D L R+W+ C D D P
Sbjct: 179 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 215
Score = 54 (24.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 17/81 (20%), Positives = 35/81 (43%)
Query: 543 VNMIVWSLDNRFVLAAIMD--CRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
V+ + ++ D ++++ D CRI W+ A G + +L N + ++
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRI--WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 231
Query: 601 AGYDGKTIVWDIWEGIPIRIY 621
A D +WD +G ++ Y
Sbjct: 232 ATLDNTLKLWDYSKGKCLKTY 252
Score = 46 (21.3 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 391 QSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
+ + IF G V+GS D L +WN
Sbjct: 258 EKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Score = 39 (18.8 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 13/70 (18%), Positives = 29/70 (41%)
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASR 459
F+ NG + + D ++W+ K + +GH+N+ Y F+ +V
Sbjct: 222 FSPNGKYILAATLDNTLKLWDYSKGKC---------LKTYTGHKNE-KYCIFANFSVTGG 271
Query: 460 FSLADSSKED 469
+ S+++
Sbjct: 272 KWIVSGSEDN 281
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 200 (75.5 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 103/437 (23%), Positives = 157/437 (35%)
Query: 205 GGFTRHHRAPSIRAACYAIAKPSTMVQKMQNIKR----VRGHRNAVYCAIFD-RSGRYVI 259
G R H +A V K+Q + R + GH + CA F S +
Sbjct: 110 GALLRQHGIEDAFETTLTLAAEPQAVFKVQAVSRLAHRIPGHGEPILCAQFSPASSARLA 169
Query: 260 TGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLP 319
TGS D +IW ET + +GH G + D +R+W G
Sbjct: 170 TGSGDNTARIWDAETGTPKHTLKGHAGWVLGVSWSPDGTRLATCSMDKTVRIWDPETGKQ 229
Query: 320 I-SVLRGHTAAVTAIAFSP----RPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPS 374
+ S L+GH V IA+ P R G+ +L+S+S D T RIW R
Sbjct: 230 VGSELKGHAKWVQGIAWEPLHLWRDGTP-RLVSASKDFTARIWTVNTG---------RTE 279
Query: 375 DAVAGRNMAPSSSAGPQSHQIFCCAFNA-NGT-VFVTGSSDTLARVWNACKPNT-DDSDQ 431
++G + S C + A NGT V T S D +VW+A K D
Sbjct: 280 HVLSGHKGSVS-----------CVRWGAGNGTGVVYTASHDKTVKVWDAVKGTLLHDLKS 328
Query: 432 PNHEIDVLSGHENDV---NYVQFSGCAVASRFSLADSSKEDSTPKFKNSWFCHDNIVTCS 488
H ++ L+ + V + + A+ +KE + + +V+ S
Sbjct: 329 HAHWVNHLALSTDFVCRTGFFDHTKTVPATAEEKTAKAKERYEKAARVGGKIVERLVSAS 388
Query: 489 RDGSAIIWIPRSRRSHPKA---ARWTQAYHLKVXXXXXXXXXXXXXXXXXI--------L 537
D + ++ P + + P A Q H+ + +
Sbjct: 389 DDFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSPDGSMIASAGWDNATKLWNARDGKFI 448
Query: 538 PTPRG----VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPF 593
T RG V +S D+R ++ A D + VWN G L L GH + Y +D P
Sbjct: 449 NTLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWNVRTGKLATDLPGHEDEVYGVDWSPD 508
Query: 594 NPRIAMSAGYDGKTIVW 610
R+ S G D +W
Sbjct: 509 GQRVG-SGGRDKAVRLW 524
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 182 (69.1 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 41/126 (32%), Positives = 59/126 (46%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
Q ++ GH V C F + Y+ TGS DR V++W + C+ GH+G I
Sbjct: 598 QPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAF 657
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D + +W + GL + L+GHT + A+ FS R G + L S S D T
Sbjct: 658 SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFS-RDGEI--LASGSMDNT 714
Query: 354 CRIWDA 359
R+WDA
Sbjct: 715 VRLWDA 720
Score = 167 (63.8 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 37/123 (30%), Positives = 56/123 (45%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
+K + GH VY F Y+++ S+D V++WS++T CL +GH + D
Sbjct: 516 LKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 575
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D + R+W P+ + GH A VT F P S Y + + S D T R
Sbjct: 576 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRF--HPNSNY-IATGSADRTVR 632
Query: 356 IWD 358
+WD
Sbjct: 633 LWD 635
Score = 140 (54.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 31/119 (26%), Positives = 53/119 (44%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXX 299
+GH V+ F G Y ++G DR+ ++W+ + L GH D+T
Sbjct: 562 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNY 621
Query: 300 XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D +R+W + +G + + GH + ++AFSP G L + + DG +WD
Sbjct: 622 IATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPN-GRF--LATGATDGRVLLWD 677
Score = 99 (39.9 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 52/217 (23%), Positives = 84/217 (38%)
Query: 258 VITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDG 317
++ G D V++WS+ T L S + D++ D + R+
Sbjct: 465 IVGGFADSTVRVWSV-TPKKLRSVKA-AADLS---------LIDKESDDVLERIMDEKTA 513
Query: 318 LPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR-------Y--------- 361
+ +L GH+ V +FSP Y LLS S+DGT R+W + Y
Sbjct: 514 SELKILYGHSGPVYGTSFSPDRN--Y-LLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWD 570
Query: 362 SQFSPRIY--IPRPSDAVAGR----NMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTL 415
+QFSP Y + D VA + P + C F+ N TGS+D
Sbjct: 571 TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRT 630
Query: 416 ARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS 452
R+W+ N + + +GH+ ++ + FS
Sbjct: 631 VRLWDVLNGNC---------VRIFTGHKGPIHSLAFS 658
Score = 90 (36.7 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 19/69 (27%), Positives = 33/69 (47%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
++ + +S + RF+ D R+ +W+ G +V L GHT++ Y L + I S
Sbjct: 652 IHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSR-DGEILASGS 710
Query: 603 YDGKTIVWD 611
D +WD
Sbjct: 711 MDNTVRLWD 719
Score = 65 (27.9 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWNACKPNTD-DSDQPNHEIDVLSGHEN 444
I+ F+ +G + +GS D R+W+A K D ++D + +GH N
Sbjct: 694 IYALRFSRDGEILASGSMDNTVRLWDAVKAFEDLETD----DFTTATGHIN 740
Score = 47 (21.6 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWN 420
I AF+ NG TG++D +W+
Sbjct: 652 IHSLAFSPNGRFLATGATDGRVLLWD 677
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 150 (57.9 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 59/268 (22%), Positives = 110/268 (41%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYC--LASCRGHEGDITDXXXXXX 296
++GH +Y + F G ++ + D+ + +W++ C A +GH+G I +
Sbjct: 32 LQGHGGEIYTSQFSSDGSFLASAGYDQQIFLWNV-FGECENFAVLKGHKGAIMEVKFNAD 90
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D +RVW + G I + HT V ++ + R + + S+SDDGT +
Sbjct: 91 SSHLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQM--ICSASDDGTVMV 148
Query: 357 WDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFV-TGSSDTL 415
D R + + + AV + A + G +QI N +V +G DT+
Sbjct: 149 HDMRSKEAAKKFICKYQQTAVTFNDAADNVICGGIDNQIKVWDMLRNDVRYVLSGHRDTI 208
Query: 416 ARVWNACKPNTDDSDQPNHEIDVLSGHENDVN-YVQFSGCAVASRFSLADSSKEDSTPKF 474
+ + N + + + ++S D+ +V + +R+ A + E +
Sbjct: 209 TSL--SVSHNGNFLLSNSMDCSLMSW---DIRPFVPAQ--RLVARYQGASHNFEKNL--L 259
Query: 475 KNSWFCHDNIVTC-SRDGSAIIWIPRSR 501
K W DN +T S D +W +SR
Sbjct: 260 KCGWSPRDNYITAGSADRFVYVWNAKSR 287
Score = 93 (37.8 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 23/61 (37%), Positives = 32/61 (52%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKT 607
WS + ++ A D + VWNA + V+ L GH S +HP +I +SAG D KT
Sbjct: 263 WSPRDNYITAGSADRFVYVWNAKSRACVYKLPGHLGSVNCTALHP-TQQILLSAGSD-KT 320
Query: 608 I 608
I
Sbjct: 321 I 321
Score = 93 (37.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 15/57 (26%), Positives = 32/57 (56%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
+N ++GH+ A+ F+ ++++ D+ V++W MET C+ + + H DI +
Sbjct: 70 ENFAVLKGHKGAIMEVKFNADSSHLVSAGTDKTVRVWDMETGSCIRNFKSHT-DIVN 125
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 169 (64.5 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 36/127 (28%), Positives = 61/127 (48%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
K + GH+ + + +++ SDD+ +KIW + + CL + +GH +
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D +R+W + G + L H+ V+A+ F+ R GS+ ++SSS DG CRI
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSL--IVSSSYDGLCRI 197
Query: 357 WDARYSQ 363
WD Q
Sbjct: 198 WDTASGQ 204
Score = 150 (57.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 35/129 (27%), Positives = 61/129 (47%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
+K ++GH N V+C F+ +++GS D V+IW ++T CL + H ++
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVL-RGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D + R+W G + L V+ + FSP G Y +L+++ D T
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN-GK-Y-ILAATLDNTL 238
Query: 355 RIWDARYSQ 363
++WD YS+
Sbjct: 239 KLWD--YSK 245
Score = 146 (56.5 bits), Expect = 3.5e-11, Sum P(3) = 3.5e-11
Identities = 40/156 (25%), Positives = 70/156 (44%)
Query: 224 AKPSTMVQKMQNIK-RVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCR 282
+KP+ V+ +K + GH AV F +G ++ + S D+L+KIW +
Sbjct: 26 SKPAP-VKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 84
Query: 283 GHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSV 342
GH+ I+D D +++W + G + L+GH+ V F+P+ +
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI 144
Query: 343 YQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVA 378
+S S D + RIWD + + + P SD V+
Sbjct: 145 ---VSGSFDESVRIWDVKTGKCLKTL--PAHSDPVS 175
Score = 72 (30.4 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 553 RFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI-VW 610
+++++ D + +WN +V L GHT+ HP IA +A + KTI +W
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 66 (28.3 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 14/72 (19%), Positives = 35/72 (48%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVL--DVHPFNPRIAMS 600
V+ + +S + +++LAA +D + +W+ + G + + T H Y + + + +S
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVS 276
Query: 601 AGYDGKTIVWDI 612
D +W++
Sbjct: 277 GSEDNLVYIWNL 288
Score = 62 (26.9 bits), Expect = 3.5e-11, Sum P(3) = 3.5e-11
Identities = 24/92 (26%), Positives = 37/92 (40%)
Query: 400 FNANGTVFVTGSSDTLARVWNA----CKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCA 455
FN +G++ V+ S D L R+W+ C D D P + + N Y+
Sbjct: 179 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP--PVSFVKFSPNG-KYIL--AAT 233
Query: 456 VASRFSLADSSKEDSTPKFKNSWFCHDNIVTC 487
+ + L D SK K ++ CH N C
Sbjct: 234 LDNTLKLWDYSKG----KCLKTYTCHKNEKYC 261
Score = 54 (24.1 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 17/81 (20%), Positives = 35/81 (43%)
Query: 543 VNMIVWSLDNRFVLAAIMD--CRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
V+ + ++ D ++++ D CRI W+ A G + +L N + ++
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRI--WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 231
Query: 601 AGYDGKTIVWDIWEGIPIRIY 621
A D +WD +G ++ Y
Sbjct: 232 ATLDNTLKLWDYSKGKCLKTY 252
Score = 46 (21.3 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 391 QSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
+ + IF G V+GS D L +WN
Sbjct: 258 EKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 145 (56.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 35/124 (28%), Positives = 56/124 (45%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+ GH AV F +G+Y+ +GS D V+ W + T +C+GH +
Sbjct: 61 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGK 120
Query: 299 XXXXXXXDCIIRVWRLPDGLPIS-VLRGHTAAVTAIAFSP---RPGSVYQLLSSSDDGTC 354
+ I +W G + VL GH+ +T +++ P P Y + SSS DG+
Sbjct: 121 TLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRY-MASSSKDGSV 179
Query: 355 RIWD 358
R+WD
Sbjct: 180 RVWD 183
Score = 136 (52.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 43/172 (25%), Positives = 76/172 (44%)
Query: 215 SIRAACYAIAKPSTMVQKMQ-NIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWS-M 272
++R + A+ S Q +Q +++ ++ Y + + +++GSDD + +WS
Sbjct: 251 ALRTGAFEPAEASINAQDLQGSLQELKDRALRRYNLVRGQGPERLVSGSDDFTLFMWSPA 310
Query: 273 ETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTA 332
E LA GH+ I D I++W G ++ LRGH AAV
Sbjct: 311 EDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQ 370
Query: 333 IAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAP 384
IA+S L+S S D T ++WD + + + + P +D V + +P
Sbjct: 371 IAWS---ADSRLLVSGSSDSTLKVWDVKAQKLAADL--PGHADEVYAVDWSP 417
Score = 125 (49.1 bits), Expect = 0.00049, P = 0.00049
Identities = 32/122 (26%), Positives = 51/122 (41%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
+ R+ GH+ + +F R + + S D+ +K+W T LAS RGH +
Sbjct: 316 LARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 375
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D ++VW + + L GH V A+ +SP G ++ S D R
Sbjct: 376 DSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSP-DGQ--RVASGGKDKCLR 432
Query: 356 IW 357
IW
Sbjct: 433 IW 434
Score = 102 (41.0 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V I WS D+R +++ D + VW+ L L GH + Y +D P R+A S G
Sbjct: 368 VYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVA-SGG 426
Query: 603 YDGKTIVW 610
D +W
Sbjct: 427 KDKCLRIW 434
Score = 98 (39.6 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
+N +++S D+R + +A D I +W+ G + SL GH + Y + + R+ +S
Sbjct: 326 INQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI-AWSADSRLLVSGS 384
Query: 603 YDGKTIVWDI 612
D VWD+
Sbjct: 385 SDSTLKVWDV 394
Score = 89 (36.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 23/81 (28%), Positives = 32/81 (39%)
Query: 256 RYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLP 315
RY+ + S D V++W C GH +T D I+VWR
Sbjct: 168 RYMASSSKDGSVRVWDTTAGRCERILTGHTQSVT-CLRWGGDGLLYSASQDRTIKVWRAH 226
Query: 316 DGLPISVLRGHTAAVTAIAFS 336
DG+ L+GH V +A S
Sbjct: 227 DGVLCRTLQGHGHWVNTMALS 247
Score = 86 (35.3 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 31/126 (24%), Positives = 50/126 (39%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASC-RGHEGDITDXXXXXXXX 298
+GHR+ V + G+ + +G + + +W T + GH IT
Sbjct: 104 QGHRHWVLSISWSPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHA 163
Query: 299 X-----XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D +RVW G +L GHT +VT + + G +Y S+S D T
Sbjct: 164 NPECRYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGG-DGLLY---SASQDRT 219
Query: 354 CRIWDA 359
++W A
Sbjct: 220 IKVWRA 225
Score = 78 (32.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 30/132 (22%), Positives = 50/132 (37%)
Query: 277 CLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFS 336
C +S GH + D +R W L P +GH V +I++S
Sbjct: 57 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWS 116
Query: 337 PRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIF 396
P G L S +G +WD + R+ + S + G + P A P+ +
Sbjct: 117 P-DGKT--LASGCKNGQILLWDPSTGKQVGRV-LAGHSKWITGLSWEPLH-ANPECR--Y 169
Query: 397 CCAFNANGTVFV 408
+ + +G+V V
Sbjct: 170 MASSSKDGSVRV 181
Score = 65 (27.9 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDV 438
++ A++A+ + V+GSSD+ +VW+ K +D P H +V
Sbjct: 368 VYQIAWSADSRLLVSGSSDSTLKVWDV-KAQKLAADLPGHADEV 410
Score = 65 (27.9 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 19/67 (28%), Positives = 29/67 (43%)
Query: 553 RFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDI 612
R++ ++ D + VW+ G LTGHT+S L + SA D VW
Sbjct: 168 RYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWG--GDGLLYSASQDRTIKVWRA 225
Query: 613 WEGIPIR 619
+G+ R
Sbjct: 226 HDGVLCR 232
Score = 37 (18.1 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 5/26 (19%), Positives = 13/26 (50%)
Query: 394 QIFCCAFNANGTVFVTGSSDTLARVW 419
+++ ++ +G +G D R+W
Sbjct: 409 EVYAVDWSPDGQRVASGGKDKCLRIW 434
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 160 (61.4 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 42/123 (34%), Positives = 55/123 (44%)
Query: 238 RVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXX 297
R+ GH V F SG Y+++ S D ++W + T L GH I
Sbjct: 260 RLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDG 319
Query: 298 XXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIW 357
D I R+W L G I VL H + A+A+SP G YQL +SS D T +IW
Sbjct: 320 SLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPN-G--YQLATSSADDTVKIW 376
Query: 358 DAR 360
D R
Sbjct: 377 DLR 379
Score = 101 (40.6 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 44/200 (22%), Positives = 74/200 (37%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
+QK + + G + F +G + +GS VK+W+ + + RGH ++
Sbjct: 159 LQKAELMGSQIGGERPIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVS 218
Query: 290 DXX---------XXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPG 340
D + +W+ P+ L GH A V +AF P G
Sbjct: 219 GLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPS-G 277
Query: 341 SVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAF 400
Y L+S+S D T R+WD G + S IF A
Sbjct: 278 D-Y-LVSASFDTTWRLWDVH-----------------TGVELLMQEG---HSEGIFSIAC 315
Query: 401 NANGTVFVTGSSDTLARVWN 420
+G++ +G +D + R+W+
Sbjct: 316 QPDGSLVSSGGNDAIGRIWD 335
Score = 100 (40.3 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 33/137 (24%), Positives = 53/137 (38%)
Query: 233 MQNIKRVRGHRNAV-----Y--CAIFDRSGRYVI--TGSDDRLVKIWSMETAYCLASCRG 283
+ ++ RGH + V Y C +D + TG+ D V +W + L G
Sbjct: 204 LSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRLEG 263
Query: 284 HEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVY 343
H + D R+W + G+ + + GH+ + +IA P GS+
Sbjct: 264 HLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQP-DGSLV 322
Query: 344 QLLSSSDDGTCRIWDAR 360
S +D RIWD R
Sbjct: 323 S--SGGNDAIGRIWDLR 337
Score = 87 (35.7 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 552 NRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVW 610
NRF+ + D + +WN + SL+ S+ GH E V+ V + R +S+GYD +W
Sbjct: 405 NRFIATSGYDGCVKLWNPLNCSLIKSMVGHEEK--VMSVDGYGDRF-ISSGYDRTIKLW 460
Score = 72 (30.4 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 22/75 (29%), Positives = 36/75 (48%)
Query: 541 RGVNMIVWSLDNRFVLA-AIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNP---R 596
R + + WS N + LA + D + +W+ SL H++ H S+ V DV R
Sbjct: 350 RQIVAMAWS-PNGYQLATSSADDTVKIWDLRKVSLAHTIPAH--SSLVSDVRYIESGVNR 406
Query: 597 IAMSAGYDGKTIVWD 611
++GYDG +W+
Sbjct: 407 FIATSGYDGCVKLWN 421
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 165 (63.1 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 36/119 (30%), Positives = 57/119 (47%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+RGHR V+ F+ R + +GS DR ++IW+++T C+ + GH G I
Sbjct: 503 LRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGT 562
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIW 357
D +++VW L G ++ L H V A+A S GS+ L+S D +W
Sbjct: 563 QVVSAAADGLVKVWSLSSGECVATLDNHEDRVWALA-SRFDGSL--LVSGGADAVVSVW 618
Score = 150 (57.9 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 37/129 (28%), Positives = 58/129 (44%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
+ IK ++ H V D + + TG + LVK+W + AY S RGH G I+
Sbjct: 94 RRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCF 153
Query: 294 XXXXXX--XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDD 351
D +R+W L ++V GH++ + + F P GS LLS S D
Sbjct: 154 GKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPT-GSF--LLSGSRD 210
Query: 352 GTCRIWDAR 360
T ++W+ +
Sbjct: 211 KTVQVWNIK 219
Score = 129 (50.5 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 27/119 (22%), Positives = 51/119 (42%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
++ H V + GR + + S D+ +K+W T + RGH +
Sbjct: 461 IKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSR 520
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIW 357
D IR+W + + L GHT A+ + + + G+ Q++S++ DG ++W
Sbjct: 521 QLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQ-GT--QVVSAAADGLVKVW 576
Score = 104 (41.7 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 22/72 (30%), Positives = 38/72 (52%)
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
R VN I S D R + +A D I +W+++ G +V L GH + +PF+ ++A
Sbjct: 466 RDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASG 525
Query: 601 AGYDGKTIVWDI 612
+G D +W++
Sbjct: 526 SG-DRTIRIWNV 536
Score = 103 (41.3 bits), Expect = 6.4e-07, Sum P(3) = 6.4e-07
Identities = 27/130 (20%), Positives = 52/130 (40%)
Query: 258 VITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDG 317
+I RL+ I+ + + + S + HE + + +++VW +
Sbjct: 76 LIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGA 135
Query: 318 LPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAV 377
RGH ++A+ F + + L S +DD R+WD S+ S ++ S +
Sbjct: 136 YVTHSFRGHGGVISALCFGKHQNT-WVLASGADDSRVRLWDLNSSR-SMAVFEGH-SSVI 192
Query: 378 AGRNMAPSSS 387
G P+ S
Sbjct: 193 RGLTFEPTGS 202
Score = 74 (31.1 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVW-DIW 613
V++A D + VW+ + G V +L H + + L F+ + +S G D VW D+
Sbjct: 564 VVSAAADGLVKVWSLSSGECVATLDNHEDRVWAL-ASRFDGSLLVSGGADAVVSVWKDVT 622
Query: 614 EG-IPIRIYEISRFRDGASIILSD 636
E I + E+ R R A +LS+
Sbjct: 623 EEYIAKQAEELER-RVEAEQLLSN 645
Score = 59 (25.8 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 32/126 (25%), Positives = 50/126 (39%)
Query: 1456 GDEVVYLRQGHQEYINYSGSREVGPWITVKGNIRAVEFCKVESLEYATASGSGDSCCKMT 1515
G +V + +GH + + S E G W+ V + ++E D+ K
Sbjct: 353 GTQVFGVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNL-NIE--------DNVYKCI 403
Query: 1516 LKFIDPTSSVSNMTFRLTLPEVTGFPDFLV----ERT--RFDAAIQRNWTCRDKCKVWWK 1569
F T+SV+ + L +V G+P FL +RT RF+ Q N + VW
Sbjct: 404 HVFTGHTASVTAVA--LGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTI 461
Query: 1570 NESDED 1575
D D
Sbjct: 462 KAHDRD 467
Score = 58 (25.5 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWN 420
++ C+FN +GS D R+WN
Sbjct: 510 VWACSFNPFSRQLASGSGDRTIRIWN 535
Score = 51 (23.0 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 554 FVLAAIMDCRICVWNAADGSLVHSL-TGHT-ESTYVLDVHPFNPRIAMSAGYDGKTIVWD 611
F+L+ D + VWN S V ++ H+ E+ ++ P +I +AG + WD
Sbjct: 203 FLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWVNGQP-EEKILYTAGEGNLILAWD 261
Query: 612 IWE 614
W+
Sbjct: 262 -WK 263
Score = 50 (22.7 bits), Expect = 6.4e-07, Sum P(3) = 6.4e-07
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVL 439
F G+ ++GS D +VWN K + + H ++ +
Sbjct: 197 FEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAI 236
Score = 46 (21.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 394 QIFCCAFNANGTVFVTGSSDTLARVW 419
+++ A +G++ V+G +D + VW
Sbjct: 593 RVWALASRFDGSLLVSGGADAVVSVW 618
Score = 44 (20.5 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 564 ICVWNAADGSLVHSL--TGHTESTYVLDVHPFNPRIAMSAGYD 604
I W+ GS + T H+E+ ++ V PF+ +S D
Sbjct: 257 ILAWDWKSGSRLDPGVDTTHSETNAIIQVVPFSENTLLSVHSD 299
Score = 44 (20.5 bits), Expect = 2.1e-05, Sum P(4) = 2.1e-05
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 1484 VKGNIRAVEFCKVESLEYATASGSGD 1509
++G+ R V C ASGSGD
Sbjct: 503 LRGHRRGVWACSFNPFSRQLASGSGD 528
Score = 44 (20.5 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 13/50 (26%), Positives = 21/50 (42%)
Query: 549 SLDNRFVLAAIMDCRICVWNA--ADG--SLVHSLTGHTESTYVLDVHPFN 594
S D ++ D + +WN D +H TGHT S + + P +
Sbjct: 373 SEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLD 422
Score = 42 (19.8 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 402 ANGTVFVTGSSDTLARVWN 420
+ GT V+ ++D L +VW+
Sbjct: 559 SQGTQVVSAAADGLVKVWS 577
Score = 38 (18.4 bits), Expect = 2.1e-05, Sum P(4) = 2.1e-05
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 1046 DKLEDYLNLSNGYKDGKIR-W 1065
D ED + L+ G KD +R W
Sbjct: 371 DSSEDGVWLATGAKDNTVRLW 391
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 153 (58.9 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 33/127 (25%), Positives = 59/127 (46%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
K + GH + + +++ SDD+ +K+W M + CL + +GH +
Sbjct: 75 KTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPP 134
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D +++W + G + L H+ ++A+ F+ GS+ ++S S DG CRI
Sbjct: 135 SNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCN-GSL--IVSGSYDGLCRI 191
Query: 357 WDARYSQ 363
WDA Q
Sbjct: 192 WDAASGQ 198
Score = 148 (57.2 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 36/129 (27%), Positives = 61/129 (47%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
+K ++GH + V+C F+ +++GS D VKIW ++T CL + H I+
Sbjct: 116 LKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNC 175
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGH-TAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D + R+W G + L V+ + FSP G Y +L+++ D T
Sbjct: 176 NGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPN-GK-Y-ILTATLDNTL 232
Query: 355 RIWDARYSQ 363
++WD YS+
Sbjct: 233 KLWD--YSR 239
Score = 136 (52.9 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 30/120 (25%), Positives = 55/120 (45%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH A+ F +G ++ + + D L+ IW C + GH +I+D
Sbjct: 37 GHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRL 96
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
D ++VW + G + L+GH+ V F+P P ++ ++S S D + +IW+ +
Sbjct: 97 VSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNP-PSNL--IVSGSFDESVKIWEVK 153
Score = 77 (32.2 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 553 RFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI-VW 610
++V++ D + +WN +V L GHT+ HP IA +A + KTI VW
Sbjct: 266 KWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVW 324
Score = 72 (30.4 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 392 SHQIFCCAFNANGTVFVTGSSDTLARVWNA 421
S I FN NG++ V+GS D L R+W+A
Sbjct: 165 SDPISAVNFNCNGSLIVSGSYDGLCRIWDA 194
Score = 72 (30.4 bits), Expect = 4.2e-11, Sum P(3) = 4.2e-11
Identities = 15/72 (20%), Positives = 34/72 (47%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVL--DVHPFNPRIAMS 600
V+ + +S + +++L A +D + +W+ + G + + TGH Y L + +S
Sbjct: 211 VSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVS 270
Query: 601 AGYDGKTIVWDI 612
D +W++
Sbjct: 271 GSEDNMVYIWNL 282
Score = 58 (25.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 19/83 (22%), Positives = 40/83 (48%)
Query: 543 VNMIVWSLDNRFVLAAIMD--CRICVWNAADGSLVHSLT--GHTESTYVLDVHPFNPRIA 598
++ + ++ + +++ D CRI W+AA G + +L G+ ++V P N +
Sbjct: 168 ISAVNFNCNGSLIVSGSYDGLCRI--WDAASGQCLRTLADEGNPPVSFV-KFSP-NGKYI 223
Query: 599 MSAGYDGKTIVWDIWEGIPIRIY 621
++A D +WD G ++ Y
Sbjct: 224 LTATLDNTLKLWDYSRGRCLKTY 246
Score = 51 (23.0 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 18/95 (18%), Positives = 41/95 (43%)
Query: 375 DAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNH 434
DA +G+ + + G + + F+ NG +T + D ++W+ +
Sbjct: 193 DAASGQCLRTLADEG--NPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRC-------- 242
Query: 435 EIDVLSGHENDVNYVQFSGCAVASRFSLADSSKED 469
+ +GH+N+ Y F+ +V R + S+++
Sbjct: 243 -LKTYTGHKNE-KYCLFASFSVTGRKWVVSGSEDN 275
Score = 46 (21.3 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 375 DAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFV-TGSSDTLARVWN 420
D GR + + + + +F +F+ G +V +GS D + +WN
Sbjct: 236 DYSRGRCLKTYTGHKNEKYCLFA-SFSVTGRKWVVSGSEDNMVYIWN 281
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 182 (69.1 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 42/126 (33%), Positives = 59/126 (46%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
Q ++ GH V C F + YV TGS DR V++W + C+ GH+G I
Sbjct: 378 QPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTF 437
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D + +W + GL + L+GHT V ++ FS R G + L S S D T
Sbjct: 438 SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS-RDGEI--LASGSMDNT 494
Query: 354 CRIWDA 359
R+WDA
Sbjct: 495 VRLWDA 500
Score = 168 (64.2 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 37/123 (30%), Positives = 56/123 (45%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
+K + GH VY A F Y+++ S+D V++WS++T CL +GH + D
Sbjct: 296 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 355
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D + R+W P+ + GH A V F P S Y + + S D T R
Sbjct: 356 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRF--HPNSNY-VATGSADRTVR 412
Query: 356 IWD 358
+WD
Sbjct: 413 LWD 415
Score = 131 (51.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 29/119 (24%), Positives = 51/119 (42%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXX 299
+GH V+ F G Y ++G DR+ ++W+ + L GH D+
Sbjct: 342 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNY 401
Query: 300 XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D +R+W + +G + + GH + ++ FSP G L + + DG +WD
Sbjct: 402 VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPN-GRF--LATGATDGRVLLWD 457
Score = 94 (38.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 20/76 (26%), Positives = 36/76 (47%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN + ++ +V D + +W+ +G+ V TGH + L P N R +
Sbjct: 390 VNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP-NGRFLATGA 448
Query: 603 YDGKTIVWDIWEGIPI 618
DG+ ++WDI G+ +
Sbjct: 449 TDGRVLLWDIGHGLMV 464
Score = 90 (36.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 39/152 (25%), Positives = 59/152 (38%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
K++R + A ++ D+ SDD L +I +TA L GH G +
Sbjct: 262 KKLRSVKQAADLSLIDKE-------SDDVLERIMDEKTASELKILYGHSGPVYGASFSPD 314
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D +R+W L + +GH V FSP G Y +S D R+
Sbjct: 315 RNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY-G--YYFVSGGHDRVARL 371
Query: 357 WDARYSQFSP-RIYIPRPSDAVAGRNMAPSSS 387
W + Q P RI+ +D R P+S+
Sbjct: 372 WATDHYQ--PLRIFAGHLADVNCTR-FHPNSN 400
Score = 80 (33.2 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 18/69 (26%), Positives = 32/69 (46%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
++ + +S + RF+ D R+ +W+ G +V L GHT++ L + I S
Sbjct: 432 IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR-DGEILASGS 490
Query: 603 YDGKTIVWD 611
D +WD
Sbjct: 491 MDNTVRLWD 499
Score = 60 (26.2 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 391 QSHQIFCCA--FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSG 441
+ H C+ F+ +G + +GS D R+W+A K +D + N + ++L G
Sbjct: 468 KGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKA-FEDLETDNSQ-ELLLG 518
Score = 43 (20.2 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWN 420
I F+ NG TG++D +W+
Sbjct: 432 IHSLTFSPNGRFLATGATDGRVLLWD 457
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 145 (56.1 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 34/124 (27%), Positives = 56/124 (45%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+ GH AV F +G+Y+ +GS D V+ W + T +C+GH +
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGK 169
Query: 299 XXXXXXXDCIIRVWRLPDGLPIS-VLRGHTAAVTAIAFSP---RPGSVYQLLSSSDDGTC 354
+ + +W GL + L GH+ +T +++ P P Y + SSS DG+
Sbjct: 170 KLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRY-VASSSKDGSV 228
Query: 355 RIWD 358
R+WD
Sbjct: 229 RVWD 232
Score = 144 (55.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 43/172 (25%), Positives = 78/172 (45%)
Query: 215 SIRAACYAIAKPSTMVQKMQ-NIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWS-M 272
++R + A+ + Q +Q ++K ++ ++ Y + + +++GSDD + +WS
Sbjct: 300 ALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPA 359
Query: 273 ETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTA 332
E LA GH+ I D I++W G ++ LRGH AAV
Sbjct: 360 EDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQ 419
Query: 333 IAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAP 384
IA+S L+S S D T ++WD + + + + P +D V + +P
Sbjct: 420 IAWS---ADSRLLVSGSSDSTLKVWDVKAQKLATDL--PGHADEVYAVDWSP 466
Score = 126 (49.4 bits), Expect = 0.00046, P = 0.00046
Identities = 33/122 (27%), Positives = 51/122 (41%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
+ R+ GH+ + +F R V + S D+ +K+W T LAS RGH +
Sbjct: 365 LARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 424
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D ++VW + + L GH V A+ +SP G ++ S D R
Sbjct: 425 DSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSP-DGQ--RVASGGKDKCLR 481
Query: 356 IW 357
IW
Sbjct: 482 IW 483
Score = 102 (41.0 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V I WS D+R +++ D + VW+ L L GH + Y +D P R+A S G
Sbjct: 417 VYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVA-SGG 475
Query: 603 YDGKTIVW 610
D +W
Sbjct: 476 KDKCLRIW 483
Score = 99 (39.9 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 21/70 (30%), Positives = 36/70 (51%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
+N +++S D+R V +A D I +W+ G + SL GH + Y + + R+ +S
Sbjct: 375 INQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI-AWSADSRLLVSGS 433
Query: 603 YDGKTIVWDI 612
D VWD+
Sbjct: 434 SDSTLKVWDV 443
Score = 92 (37.4 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 24/81 (29%), Positives = 32/81 (39%)
Query: 256 RYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLP 315
RYV + S D V++W C GH +T D I+VWR
Sbjct: 217 RYVASSSKDGSVRVWDTTAGRCERILTGHTQSVT-CLRWGGDGLLYSASQDRTIKVWRAH 275
Query: 316 DGLPISVLRGHTAAVTAIAFS 336
DG+ L+GH V +A S
Sbjct: 276 DGVLCRTLQGHGHWVNTMALS 296
Score = 90 (36.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 32/126 (25%), Positives = 51/126 (40%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLA-SCRGHEGDITDXXXXXXXX 298
+GHR+ V + G+ + +G + V +W T + + GH IT
Sbjct: 153 KGHRHWVLSISWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHM 212
Query: 299 X-----XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D +RVW G +L GHT +VT + + G +Y S+S D T
Sbjct: 213 NPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGG-DGLLY---SASQDRT 268
Query: 354 CRIWDA 359
++W A
Sbjct: 269 IKVWRA 274
Score = 69 (29.3 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 31/116 (26%), Positives = 45/116 (38%)
Query: 553 RFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDI 612
R+V ++ D + VW+ G LTGHT+S L + SA D VW
Sbjct: 217 RYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWG--GDGLLYSASQDRTIKVWRA 274
Query: 613 WEGIPIRIYEISRFRDGASIILSDDVGQLYILNTGQGESQKDAKYDQFFLGDYRPL 668
+G+ R + ++ LS D Y L TG E + Q G + L
Sbjct: 275 HDGVLCRTLQ-GHGHWVNTMALSTD----YALRTGAFEPAEATVNAQDLQGSLKEL 325
Score = 65 (27.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDV 438
++ A++A+ + V+GSSD+ +VW+ K +D P H +V
Sbjct: 417 VYQIAWSADSRLLVSGSSDSTLKVWDV-KAQKLATDLPGHADEV 459
Score = 37 (18.1 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 1362 DNVSSNLRLEQHNQPEDMYSGHNRSTSRCQLPHEEWGSSSKMT 1404
+ SS L + PE + SG + T P E+ ++MT
Sbjct: 327 ERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMT 369
Score = 37 (18.1 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 5/26 (19%), Positives = 13/26 (50%)
Query: 394 QIFCCAFNANGTVFVTGSSDTLARVW 419
+++ ++ +G +G D R+W
Sbjct: 458 EVYAVDWSPDGQRVASGGKDKCLRIW 483
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 143 (55.4 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 35/124 (28%), Positives = 56/124 (45%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+ GH AV F +G+Y+ +GS D V+ W + T +C+GH +
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGK 169
Query: 299 XXXXXXXDCIIRVWRLPDGLPIS-VLRGHTAAVTAIAFSP---RPGSVYQLLSSSDDGTC 354
+ I +W G + L GH+ +TA+++ P P Y + SSS DG+
Sbjct: 170 KLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRY-VASSSKDGSV 228
Query: 355 RIWD 358
R+WD
Sbjct: 229 RVWD 232
Score = 137 (53.3 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 43/172 (25%), Positives = 77/172 (44%)
Query: 215 SIRAACYAIAKPSTMVQKMQ-NIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWS-M 272
++R + A+ S Q ++ +++ ++ + Y + R +++GSDD + +WS
Sbjct: 300 ALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRGRGLERLVSGSDDFTLFLWSPA 359
Query: 273 ETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTA 332
E LA GH+ I D I++W G ++ LRGH AAV
Sbjct: 360 EDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQ 419
Query: 333 IAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAP 384
IA+S L+S S D T ++WD + + + + P +D V + +P
Sbjct: 420 IAWS---ADSRLLVSGSSDSTLKVWDVKAQKLAADL--PGHADEVYAVDWSP 466
Score = 125 (49.1 bits), Expect = 0.00058, P = 0.00058
Identities = 32/122 (26%), Positives = 51/122 (41%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
+ R+ GH+ + +F R + + S D+ +K+W T LAS RGH +
Sbjct: 365 LARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 424
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D ++VW + + L GH V A+ +SP G ++ S D R
Sbjct: 425 DSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSP-DGQ--RVASGGKDKCLR 481
Query: 356 IW 357
IW
Sbjct: 482 IW 483
Score = 102 (41.0 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V I WS D+R +++ D + VW+ L L GH + Y +D P R+A S G
Sbjct: 417 VYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVA-SGG 475
Query: 603 YDGKTIVW 610
D +W
Sbjct: 476 KDKCLRIW 483
Score = 98 (39.6 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
+N +++S D+R + +A D I +W+ G + SL GH + Y + + R+ +S
Sbjct: 375 INQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI-AWSADSRLLVSGS 433
Query: 603 YDGKTIVWDI 612
D VWD+
Sbjct: 434 SDSTLKVWDV 443
Score = 92 (37.4 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 24/81 (29%), Positives = 32/81 (39%)
Query: 256 RYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLP 315
RYV + S D V++W C GH +T D I+VWR
Sbjct: 217 RYVASSSKDGSVRVWDTTAGRCERILTGHTQSVT-CLRWGGDGLLYSASQDRTIKVWRAH 275
Query: 316 DGLPISVLRGHTAAVTAIAFS 336
DG+ L+GH V +A S
Sbjct: 276 DGVLCRTLQGHGHWVNTMALS 296
Score = 87 (35.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 31/126 (24%), Positives = 51/126 (40%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLA-SCRGHEGDITDXXXXXXXX 298
+GHR+ V + G+ + +G + + +W T + + GH IT
Sbjct: 153 QGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHA 212
Query: 299 X-----XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D +RVW G +L GHT +VT + + G +Y S+S D T
Sbjct: 213 NPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGG-DGLLY---SASQDRT 268
Query: 354 CRIWDA 359
++W A
Sbjct: 269 IKVWRA 274
Score = 77 (32.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 21/82 (25%), Positives = 31/82 (37%)
Query: 277 CLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFS 336
C +S GH + D +R W L P +GH V +I++S
Sbjct: 106 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWS 165
Query: 337 PRPGSVYQLLSSSDDGTCRIWD 358
P G +L S +G +WD
Sbjct: 166 P-DGK--KLASGCKNGQILLWD 184
Score = 69 (29.3 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 31/116 (26%), Positives = 46/116 (39%)
Query: 553 RFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDI 612
R+V ++ D + VW+ G LTGHT+S L + SA D VW
Sbjct: 217 RYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWG--GDGLLYSASQDRTIKVWRA 274
Query: 613 WEGIPIRIYEISRFRDGASIILSDDVGQLYILNTGQGESQKDAKYDQFFLGDYRPL 668
+G+ R + ++ LS D Y L TG E + + Q G + L
Sbjct: 275 HDGVLCRTLQ-GHGHWVNTMALSTD----YALRTGAFEPAEASVNAQDLRGSLQEL 325
Score = 65 (27.9 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDV 438
++ A++A+ + V+GSSD+ +VW+ K +D P H +V
Sbjct: 417 VYQIAWSADSRLLVSGSSDSTLKVWDV-KAQKLAADLPGHADEV 459
Score = 37 (18.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 5/26 (19%), Positives = 13/26 (50%)
Query: 394 QIFCCAFNANGTVFVTGSSDTLARVW 419
+++ ++ +G +G D R+W
Sbjct: 458 EVYAVDWSPDGQRVASGGKDKCLRIW 483
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 157 (60.3 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 36/127 (28%), Positives = 53/127 (41%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ + GH + C F +IT S D +W +ET GH GD+
Sbjct: 37 RELPGHTGYLSCCRF-LDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPD 95
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D I++W + D + GH + + A+AF P G Y + SDD TCR+
Sbjct: 96 GRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPN-G--YAFTTGSDDATCRL 152
Query: 357 WDARYSQ 363
+D R Q
Sbjct: 153 FDLRADQ 159
Score = 123 (48.4 bits), Expect = 0.00022, P = 0.00022
Identities = 34/122 (27%), Positives = 52/122 (42%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH V GR ++G+ D +K+W + + C + GHE DI
Sbjct: 82 GHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAF 141
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHT---AAVTAIAFSPRPGSVYQLLSSSDDGTCRIW 357
D R++ L + ++ H +T++AFS R G + LL+ DD C IW
Sbjct: 142 TTGSDDATCRLFDLRADQEL-LMYSHDNIICGITSVAFS-RSGRL--LLAGYDDFNCNIW 197
Query: 358 DA 359
DA
Sbjct: 198 DA 199
Score = 67 (28.6 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 17/70 (24%), Positives = 28/70 (40%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G+ + +S R +LA D +W+A G L GH L V +A +
Sbjct: 172 GITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVA-TG 230
Query: 602 GYDGKTIVWD 611
+D +W+
Sbjct: 231 SWDSFLKIWN 240
Score = 59 (25.8 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 399 AFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNY--VQFSGCAV 456
AF+ +G + + G D +W+A K D+ VL+GH+N V+ V G AV
Sbjct: 177 AFSRSGRLLLAGYDDFNCNIWDAMK-----GDRAG----VLAGHDNRVSCLGVTDDGMAV 227
Query: 457 AS 458
A+
Sbjct: 228 AT 229
Score = 55 (24.4 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 355 RIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDT 414
R+ A Y F+ I+ DA+ G AG +++ C +G TGS D+
Sbjct: 183 RLLLAGYDDFNCNIW-----DAMKGDRAGVL--AG-HDNRVSCLGVTDDGMAVATGSWDS 234
Query: 415 LARVWN 420
++WN
Sbjct: 235 FLKIWN 240
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 143 (55.4 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 35/124 (28%), Positives = 56/124 (45%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+ GH AV F +G+Y+ +GS D V+ W + T +C+GH +
Sbjct: 111 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGK 170
Query: 299 XXXXXXXDCIIRVWRLPDGLPIS-VLRGHTAAVTAIAFSP---RPGSVYQLLSSSDDGTC 354
+ I +W G + L GH+ +TA+++ P P Y + SSS DG+
Sbjct: 171 KLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRY-VASSSKDGSV 229
Query: 355 RIWD 358
R+WD
Sbjct: 230 RVWD 233
Score = 138 (53.6 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 43/172 (25%), Positives = 77/172 (44%)
Query: 215 SIRAACYAIAKPSTMVQKMQ-NIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWS-M 272
++R + A+ S Q ++ +++ ++ + Y + + +++GSDD + +WS
Sbjct: 301 ALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPA 360
Query: 273 ETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTA 332
E LA GH+ I D I++W G ++ LRGH AAV
Sbjct: 361 EDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQ 420
Query: 333 IAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAP 384
IA+S L+S S D T ++WD + + S + P +D V + +P
Sbjct: 421 IAWS---ADSRLLVSGSSDSTLKVWDVKAQKLSTDL--PGHADEVYAVDWSP 467
Score = 125 (49.1 bits), Expect = 0.00059, P = 0.00059
Identities = 32/122 (26%), Positives = 51/122 (41%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
+ R+ GH+ + +F R + + S D+ +K+W T LAS RGH +
Sbjct: 366 LARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 425
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D ++VW + + L GH V A+ +SP G ++ S D R
Sbjct: 426 DSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSP-DGQ--RVASGGKDKCLR 482
Query: 356 IW 357
IW
Sbjct: 483 IW 484
Score = 100 (40.3 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V I WS D+R +++ D + VW+ L L GH + Y +D P R+A S G
Sbjct: 418 VYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVA-SGG 476
Query: 603 YDGKTIVW 610
D +W
Sbjct: 477 KDKCLRIW 484
Score = 100 (40.3 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 21/70 (30%), Positives = 36/70 (51%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
+N +V+S D+R + +A D I +W+ G + SL GH + Y + + R+ +S
Sbjct: 376 INQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI-AWSADSRLLVSGS 434
Query: 603 YDGKTIVWDI 612
D VWD+
Sbjct: 435 SDSTLKVWDV 444
Score = 95 (38.5 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 24/81 (29%), Positives = 33/81 (40%)
Query: 256 RYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLP 315
RYV + S D V++W C + GH +T D I+VWR
Sbjct: 218 RYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVT-CLRWGGDGLLYSASQDRTIKVWRAH 276
Query: 316 DGLPISVLRGHTAAVTAIAFS 336
DG+ L+GH V +A S
Sbjct: 277 DGVLCRTLQGHGHWVNTMALS 297
Score = 79 (32.9 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 30/126 (23%), Positives = 49/126 (38%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLA-SCRGHEGDITDXXXXXXXX 298
+GHR+ V + G+ + +G + + +W T + + GH IT
Sbjct: 154 QGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHA 213
Query: 299 X-----XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D +RVW G L GH +VT + + G +Y S+S D T
Sbjct: 214 NPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWGG-DGLLY---SASQDRT 269
Query: 354 CRIWDA 359
++W A
Sbjct: 270 IKVWRA 275
Score = 77 (32.2 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 21/82 (25%), Positives = 31/82 (37%)
Query: 277 CLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFS 336
C +S GH + D +R W L P +GH V +I++S
Sbjct: 107 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWS 166
Query: 337 PRPGSVYQLLSSSDDGTCRIWD 358
P G +L S +G +WD
Sbjct: 167 P-DGK--KLASGCKNGQILLWD 185
Score = 67 (28.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDV 438
++ A++A+ + V+GSSD+ +VW+ K +D P H +V
Sbjct: 418 VYQIAWSADSRLLVSGSSDSTLKVWDV-KAQKLSTDLPGHADEV 460
Score = 67 (28.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 30/116 (25%), Positives = 46/116 (39%)
Query: 553 RFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDI 612
R+V ++ D + VW+ G +LTGH +S L + SA D VW
Sbjct: 218 RYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWG--GDGLLYSASQDRTIKVWRA 275
Query: 613 WEGIPIRIYEISRFRDGASIILSDDVGQLYILNTGQGESQKDAKYDQFFLGDYRPL 668
+G+ R + ++ LS D Y L TG E + + Q G + L
Sbjct: 276 HDGVLCRTLQ-GHGHWVNTMALSTD----YALRTGAFEPAEASVNAQDLRGSLQEL 326
Score = 37 (18.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 5/26 (19%), Positives = 13/26 (50%)
Query: 394 QIFCCAFNANGTVFVTGSSDTLARVW 419
+++ ++ +G +G D R+W
Sbjct: 459 EVYAVDWSPDGQRVASGGKDKCLRIW 484
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 141 (54.7 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 35/124 (28%), Positives = 55/124 (44%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+ GH AV F +G+Y+ +GS D V+ W + T +C+GH +
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGR 169
Query: 299 XXXXXXXDCIIRVWRLPDGLPIS-VLRGHTAAVTAIAFSP---RPGSVYQLLSSSDDGTC 354
+ I +W G + L GH+ +T +++ P P Y + SSS DG+
Sbjct: 170 KLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRY-VASSSKDGSV 228
Query: 355 RIWD 358
RIWD
Sbjct: 229 RIWD 232
Score = 124 (48.7 bits), Expect = 0.00075, P = 0.00075
Identities = 33/122 (27%), Positives = 50/122 (40%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
+ R+ GH+ + +F R V + S D+ +K+W T LAS RGH +
Sbjct: 365 LTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 424
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D ++VW + L GH V A+ +SP G ++ S D R
Sbjct: 425 DSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSP-DGQ--RVASGGKDKCLR 481
Query: 356 IW 357
IW
Sbjct: 482 IW 483
Score = 102 (41.0 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V I WS D+R +++ D + VW+ L L GH + Y +D P R+A S G
Sbjct: 417 VYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVA-SGG 475
Query: 603 YDGKTIVW 610
D +W
Sbjct: 476 KDKCLRIW 483
Score = 99 (39.9 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 21/70 (30%), Positives = 36/70 (51%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
+N +++S D+R V +A D I +W+ G + SL GH + Y + + R+ +S
Sbjct: 375 INQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI-AWSADSRLLVSGS 433
Query: 603 YDGKTIVWDI 612
D VWD+
Sbjct: 434 SDSTLKVWDV 443
Score = 93 (37.8 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 25/81 (30%), Positives = 32/81 (39%)
Query: 256 RYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLP 315
RYV + S D V+IW C GH +T D I+VWR
Sbjct: 217 RYVASSSKDGSVRIWDTTAGRCERILTGHTQSVT-CLRWGGDGLLYSASQDRTIKVWRAH 275
Query: 316 DGLPISVLRGHTAAVTAIAFS 336
DG+ L+GH V +A S
Sbjct: 276 DGVLCRTLQGHGHWVNTMALS 296
Score = 91 (37.1 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 31/126 (24%), Positives = 51/126 (40%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLA-SCRGHEGDITDXXXXXXXX 298
+GHR+ V + GR + +G + + +W T + + GH IT
Sbjct: 153 KGHRHWVLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHA 212
Query: 299 X-----XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D +R+W G +L GHT +VT + + G +Y S+S D T
Sbjct: 213 NPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGG-DGLLY---SASQDRT 268
Query: 354 CRIWDA 359
++W A
Sbjct: 269 IKVWRA 274
Score = 77 (32.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 21/82 (25%), Positives = 31/82 (37%)
Query: 277 CLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFS 336
C +S GH + D +R W L P +GH V +I++S
Sbjct: 106 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWS 165
Query: 337 PRPGSVYQLLSSSDDGTCRIWD 358
P G +L S +G +WD
Sbjct: 166 P-DGR--KLASGCKNGQILLWD 184
Score = 69 (29.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 30/116 (25%), Positives = 46/116 (39%)
Query: 553 RFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDI 612
R+V ++ D + +W+ G LTGHT+S L + SA D VW
Sbjct: 217 RYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWG--GDGLLYSASQDRTIKVWRA 274
Query: 613 WEGIPIRIYEISRFRDGASIILSDDVGQLYILNTGQGESQKDAKYDQFFLGDYRPL 668
+G+ R + ++ LS D Y L TG E + + Q G + L
Sbjct: 275 HDGVLCRTLQ-GHGHWVNTMALSTD----YALRTGAFEPAEASVNPQDLQGSLQEL 325
Score = 63 (27.2 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDV 438
++ A++A+ + V+GSSD+ +VW+ K D P H +V
Sbjct: 417 VYQIAWSADSRLLVSGSSDSTLKVWDV-KAQKLAMDLPGHADEV 459
Score = 37 (18.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 5/26 (19%), Positives = 13/26 (50%)
Query: 394 QIFCCAFNANGTVFVTGSSDTLARVW 419
+++ ++ +G +G D R+W
Sbjct: 458 EVYAVDWSPDGQRVASGGKDKCLRIW 483
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 144 (55.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 43/172 (25%), Positives = 78/172 (45%)
Query: 215 SIRAACYAIAKPSTMVQKMQ-NIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWS-M 272
++R + A+ + Q +Q ++K ++ ++ Y + + +++GSDD + +WS
Sbjct: 302 ALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPA 361
Query: 273 ETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTA 332
E LA GH+ I D I++W G ++ LRGH AAV
Sbjct: 362 EDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQ 421
Query: 333 IAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAP 384
IA+S L+S S D T ++WD + + + + P +D V + +P
Sbjct: 422 IAWS---ADSRLLVSGSSDSTLKVWDVKAQKLTTDL--PGHADEVYAVDWSP 468
Score = 141 (54.7 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 34/124 (27%), Positives = 55/124 (44%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+ GH AV F +G+Y+ +GS D V+ W + T +C+GH +
Sbjct: 112 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGK 171
Query: 299 XXXXXXXDCIIRVWRLPDGLPIS-VLRGHTAAVTAIAFSP---RPGSVYQLLSSSDDGTC 354
+ I +W G + L GH+ +T +++ P P Y + SSS DG+
Sbjct: 172 KLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRY-VASSSKDGSV 230
Query: 355 RIWD 358
R+WD
Sbjct: 231 RVWD 234
Score = 126 (49.4 bits), Expect = 0.00046, P = 0.00046
Identities = 33/122 (27%), Positives = 51/122 (41%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
+ R+ GH+ + +F R V + S D+ +K+W T LAS RGH +
Sbjct: 367 LARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 426
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D ++VW + + L GH V A+ +SP G ++ S D R
Sbjct: 427 DSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSP-DGQ--RVASGGKDKCLR 483
Query: 356 IW 357
IW
Sbjct: 484 IW 485
Score = 102 (41.0 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V I WS D+R +++ D + VW+ L L GH + Y +D P R+A S G
Sbjct: 419 VYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVA-SGG 477
Query: 603 YDGKTIVW 610
D +W
Sbjct: 478 KDKCLRIW 485
Score = 99 (39.9 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 21/70 (30%), Positives = 36/70 (51%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
+N +++S D+R V +A D I +W+ G + SL GH + Y + + R+ +S
Sbjct: 377 INQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI-AWSADSRLLVSGS 435
Query: 603 YDGKTIVWDI 612
D VWD+
Sbjct: 436 SDSTLKVWDV 445
Score = 92 (37.4 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 24/81 (29%), Positives = 32/81 (39%)
Query: 256 RYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLP 315
RYV + S D V++W C GH +T D I+VWR
Sbjct: 219 RYVASSSKDGSVRVWDTTAGRCERILTGHTQSVT-CLRWGGDGLLYSASQDRTIKVWRAH 277
Query: 316 DGLPISVLRGHTAAVTAIAFS 336
DG+ L+GH V +A S
Sbjct: 278 DGVLCRTLQGHGHWVNTMALS 298
Score = 88 (36.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 31/126 (24%), Positives = 51/126 (40%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLA-SCRGHEGDITDXXXXXXXX 298
+GHR+ V + G+ + +G + + +W T + + GH IT
Sbjct: 155 KGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHM 214
Query: 299 X-----XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D +RVW G +L GHT +VT + + G +Y S+S D T
Sbjct: 215 NPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGG-DGLLY---SASQDRT 270
Query: 354 CRIWDA 359
++W A
Sbjct: 271 IKVWRA 276
Score = 69 (29.3 bits), Expect = 6.6e-07, Sum P(3) = 6.6e-07
Identities = 31/116 (26%), Positives = 45/116 (38%)
Query: 553 RFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDI 612
R+V ++ D + VW+ G LTGHT+S L + SA D VW
Sbjct: 219 RYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWG--GDGLLYSASQDRTIKVWRA 276
Query: 613 WEGIPIRIYEISRFRDGASIILSDDVGQLYILNTGQGESQKDAKYDQFFLGDYRPL 668
+G+ R + ++ LS D Y L TG E + Q G + L
Sbjct: 277 HDGVLCRTLQ-GHGHWVNTMALSTD----YALRTGAFEPAEATVNAQDLQGSLKEL 327
Score = 66 (28.3 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDV 438
++ A++A+ + V+GSSD+ +VW+ K +D P H +V
Sbjct: 419 VYQIAWSADSRLLVSGSSDSTLKVWDV-KAQKLTTDLPGHADEV 461
Score = 37 (18.1 bits), Expect = 6.6e-07, Sum P(3) = 6.6e-07
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 1362 DNVSSNLRLEQHNQPEDMYSGHNRSTSRCQLPHEEWGSSSKMT 1404
+ SS L + PE + SG + T P E+ ++MT
Sbjct: 329 ERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMT 371
Score = 37 (18.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 5/26 (19%), Positives = 13/26 (50%)
Query: 394 QIFCCAFNANGTVFVTGSSDTLARVW 419
+++ ++ +G +G D R+W
Sbjct: 460 EVYAVDWSPDGQRVASGGKDKCLRIW 485
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 182 (69.1 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 42/126 (33%), Positives = 59/126 (46%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
Q ++ GH V C F + YV TGS DR V++W + C+ GH+G I
Sbjct: 616 QPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTF 675
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D + +W + GL + L+GHT V ++ FS R G + L S S D T
Sbjct: 676 SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS-RDGEI--LASGSMDNT 732
Query: 354 CRIWDA 359
R+WDA
Sbjct: 733 VRLWDA 738
Score = 168 (64.2 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 37/123 (30%), Positives = 56/123 (45%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
+K + GH VY A F Y+++ S+D V++WS++T CL +GH + D
Sbjct: 534 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 593
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D + R+W P+ + GH A V F P S Y + + S D T R
Sbjct: 594 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRF--HPNSNY-VATGSADRTVR 650
Query: 356 IWD 358
+WD
Sbjct: 651 LWD 653
Score = 131 (51.2 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 29/119 (24%), Positives = 51/119 (42%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXX 299
+GH V+ F G Y ++G DR+ ++W+ + L GH D+
Sbjct: 580 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNY 639
Query: 300 XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D +R+W + +G + + GH + ++ FSP G L + + DG +WD
Sbjct: 640 VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPN-GRF--LATGATDGRVLLWD 695
Score = 94 (38.1 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 20/76 (26%), Positives = 36/76 (47%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN + ++ +V D + +W+ +G+ V TGH + L P N R +
Sbjct: 628 VNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP-NGRFLATGA 686
Query: 603 YDGKTIVWDIWEGIPI 618
DG+ ++WDI G+ +
Sbjct: 687 TDGRVLLWDIGHGLMV 702
Score = 88 (36.0 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 35/127 (27%), Positives = 49/127 (38%)
Query: 262 SDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPIS 321
SDD L +I +TA L GH G + D +R+W L +
Sbjct: 518 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLV 577
Query: 322 VLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSP-RIYIPRPSDAVAGR 380
+GH V FSP G Y +S D R+W + Q P RI+ +D R
Sbjct: 578 GYKGHNYPVWDTQFSPY-G--YYFVSGGHDRVARLWATDHYQ--PLRIFAGHLADVNCTR 632
Query: 381 NMAPSSS 387
P+S+
Sbjct: 633 -FHPNSN 638
Score = 80 (33.2 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 18/69 (26%), Positives = 32/69 (46%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
++ + +S + RF+ D R+ +W+ G +V L GHT++ L + I S
Sbjct: 670 IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR-DGEILASGS 728
Query: 603 YDGKTIVWD 611
D +WD
Sbjct: 729 MDNTVRLWD 737
Score = 61 (26.5 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 391 QSHQIFCCA--FNANGTVFVTGSSDTLARVWNACKPNTD-DSDQPNHEIDVLSGHEN 444
+ H C+ F+ +G + +GS D R+W+A K D ++D + +GH N
Sbjct: 706 KGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKAFEDLETD----DFTTATGHIN 758
Score = 43 (20.2 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWN 420
I F+ NG TG++D +W+
Sbjct: 670 IHSLTFSPNGRFLATGATDGRVLLWD 695
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 182 (69.1 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 42/126 (33%), Positives = 59/126 (46%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
Q ++ GH V C F + YV TGS DR V++W + C+ GH+G I
Sbjct: 618 QPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTF 677
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D + +W + GL + L+GHT V ++ FS R G + L S S D T
Sbjct: 678 SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS-RDGEI--LASGSMDNT 734
Query: 354 CRIWDA 359
R+WDA
Sbjct: 735 VRLWDA 740
Score = 168 (64.2 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 37/123 (30%), Positives = 56/123 (45%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
+K + GH VY A F Y+++ S+D V++WS++T CL +GH + D
Sbjct: 536 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 595
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D + R+W P+ + GH A V F P S Y + + S D T R
Sbjct: 596 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRF--HPNSNY-VATGSADRTVR 652
Query: 356 IWD 358
+WD
Sbjct: 653 LWD 655
Score = 131 (51.2 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 29/119 (24%), Positives = 51/119 (42%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXX 299
+GH V+ F G Y ++G DR+ ++W+ + L GH D+
Sbjct: 582 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNY 641
Query: 300 XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D +R+W + +G + + GH + ++ FSP G L + + DG +WD
Sbjct: 642 VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPN-GRF--LATGATDGRVLLWD 697
Score = 94 (38.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 20/76 (26%), Positives = 36/76 (47%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN + ++ +V D + +W+ +G+ V TGH + L P N R +
Sbjct: 630 VNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP-NGRFLATGA 688
Query: 603 YDGKTIVWDIWEGIPI 618
DG+ ++WDI G+ +
Sbjct: 689 TDGRVLLWDIGHGLMV 704
Score = 90 (36.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 39/152 (25%), Positives = 59/152 (38%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
K++R + A ++ D+ SDD L +I +TA L GH G +
Sbjct: 502 KKLRSVKQAADLSLIDKE-------SDDVLERIMDEKTASELKILYGHSGPVYGASFSPD 554
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D +R+W L + +GH V FSP G Y +S D R+
Sbjct: 555 RNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY-G--YYFVSGGHDRVARL 611
Query: 357 WDARYSQFSP-RIYIPRPSDAVAGRNMAPSSS 387
W + Q P RI+ +D R P+S+
Sbjct: 612 WATDHYQ--PLRIFAGHLADVNCTR-FHPNSN 640
Score = 80 (33.2 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 18/69 (26%), Positives = 32/69 (46%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
++ + +S + RF+ D R+ +W+ G +V L GHT++ L + I S
Sbjct: 672 IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR-DGEILASGS 730
Query: 603 YDGKTIVWD 611
D +WD
Sbjct: 731 MDNTVRLWD 739
Score = 61 (26.5 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 391 QSHQIFCCA--FNANGTVFVTGSSDTLARVWNACKPNTD-DSDQPNHEIDVLSGHEN 444
+ H C+ F+ +G + +GS D R+W+A K D ++D + +GH N
Sbjct: 708 KGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDVETD----DFTTATGHIN 760
Score = 43 (20.2 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWN 420
I F+ NG TG++D +W+
Sbjct: 672 IHSLTFSPNGRFLATGATDGRVLLWD 697
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 182 (69.1 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 42/126 (33%), Positives = 59/126 (46%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
Q ++ GH V C F + YV TGS DR V++W + C+ GH+G I
Sbjct: 618 QPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTF 677
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D + +W + GL + L+GHT V ++ FS R G + L S S D T
Sbjct: 678 SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS-RDGEI--LASGSMDNT 734
Query: 354 CRIWDA 359
R+WDA
Sbjct: 735 VRLWDA 740
Score = 168 (64.2 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 37/123 (30%), Positives = 56/123 (45%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
+K + GH VY A F Y+++ S+D V++WS++T CL +GH + D
Sbjct: 536 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 595
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D + R+W P+ + GH A V F P S Y + + S D T R
Sbjct: 596 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRF--HPNSNY-VATGSADRTVR 652
Query: 356 IWD 358
+WD
Sbjct: 653 LWD 655
Score = 131 (51.2 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 29/119 (24%), Positives = 51/119 (42%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXX 299
+GH V+ F G Y ++G DR+ ++W+ + L GH D+
Sbjct: 582 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNY 641
Query: 300 XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D +R+W + +G + + GH + ++ FSP G L + + DG +WD
Sbjct: 642 VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPN-GRF--LATGATDGRVLLWD 697
Score = 94 (38.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 20/76 (26%), Positives = 36/76 (47%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN + ++ +V D + +W+ +G+ V TGH + L P N R +
Sbjct: 630 VNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP-NGRFLATGA 688
Query: 603 YDGKTIVWDIWEGIPI 618
DG+ ++WDI G+ +
Sbjct: 689 TDGRVLLWDIGHGLMV 704
Score = 88 (36.0 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 35/127 (27%), Positives = 49/127 (38%)
Query: 262 SDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPIS 321
SDD L +I +TA L GH G + D +R+W L +
Sbjct: 520 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLV 579
Query: 322 VLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSP-RIYIPRPSDAVAGR 380
+GH V FSP G Y +S D R+W + Q P RI+ +D R
Sbjct: 580 GYKGHNYPVWDTQFSPY-G--YYFVSGGHDRVARLWATDHYQ--PLRIFAGHLADVNCTR 634
Query: 381 NMAPSSS 387
P+S+
Sbjct: 635 -FHPNSN 640
Score = 80 (33.2 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 18/69 (26%), Positives = 32/69 (46%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
++ + +S + RF+ D R+ +W+ G +V L GHT++ L + I S
Sbjct: 672 IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR-DGEILASGS 730
Query: 603 YDGKTIVWD 611
D +WD
Sbjct: 731 MDNTVRLWD 739
Score = 61 (26.5 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 391 QSHQIFCCA--FNANGTVFVTGSSDTLARVWNACKPNTD-DSDQPNHEIDVLSGHEN 444
+ H C+ F+ +G + +GS D R+W+A K D ++D + +GH N
Sbjct: 708 KGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKAFEDLETD----DFTTATGHIN 760
Score = 43 (20.2 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWN 420
I F+ NG TG++D +W+
Sbjct: 672 IHSLTFSPNGRFLATGATDGRVLLWD 697
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 182 (69.1 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 42/126 (33%), Positives = 59/126 (46%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
Q ++ GH V C F + YV TGS DR V++W + C+ GH+G I
Sbjct: 619 QPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTF 678
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D + +W + GL + L+GHT V ++ FS R G + L S S D T
Sbjct: 679 SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS-RDGEI--LASGSMDNT 735
Query: 354 CRIWDA 359
R+WDA
Sbjct: 736 VRLWDA 741
Score = 168 (64.2 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 37/123 (30%), Positives = 56/123 (45%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
+K + GH VY A F Y+++ S+D V++WS++T CL +GH + D
Sbjct: 537 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 596
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D + R+W P+ + GH A V F P S Y + + S D T R
Sbjct: 597 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRF--HPNSNY-VATGSADRTVR 653
Query: 356 IWD 358
+WD
Sbjct: 654 LWD 656
Score = 131 (51.2 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 29/119 (24%), Positives = 51/119 (42%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXX 299
+GH V+ F G Y ++G DR+ ++W+ + L GH D+
Sbjct: 583 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNY 642
Query: 300 XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D +R+W + +G + + GH + ++ FSP G L + + DG +WD
Sbjct: 643 VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPN-GRF--LATGATDGRVLLWD 698
Score = 94 (38.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 20/76 (26%), Positives = 36/76 (47%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN + ++ +V D + +W+ +G+ V TGH + L P N R +
Sbjct: 631 VNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP-NGRFLATGA 689
Query: 603 YDGKTIVWDIWEGIPI 618
DG+ ++WDI G+ +
Sbjct: 690 TDGRVLLWDIGHGLMV 705
Score = 90 (36.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 39/152 (25%), Positives = 59/152 (38%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
K++R + A ++ D+ SDD L +I +TA L GH G +
Sbjct: 503 KKLRSVKQAADLSLIDKE-------SDDVLERIMDEKTASELKILYGHSGPVYGASFSPD 555
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D +R+W L + +GH V FSP G Y +S D R+
Sbjct: 556 RNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY-G--YYFVSGGHDRVARL 612
Query: 357 WDARYSQFSP-RIYIPRPSDAVAGRNMAPSSS 387
W + Q P RI+ +D R P+S+
Sbjct: 613 WATDHYQ--PLRIFAGHLADVNCTR-FHPNSN 641
Score = 80 (33.2 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 18/69 (26%), Positives = 32/69 (46%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
++ + +S + RF+ D R+ +W+ G +V L GHT++ L + I S
Sbjct: 673 IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR-DGEILASGS 731
Query: 603 YDGKTIVWD 611
D +WD
Sbjct: 732 MDNTVRLWD 740
Score = 61 (26.5 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 391 QSHQIFCCA--FNANGTVFVTGSSDTLARVWNACKPNTD-DSDQPNHEIDVLSGHEN 444
+ H C+ F+ +G + +GS D R+W+A K D ++D + +GH N
Sbjct: 709 KGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLETD----DFTTATGHIN 761
Score = 43 (20.2 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWN 420
I F+ NG TG++D +W+
Sbjct: 673 IHSLTFSPNGRFLATGATDGRVLLWD 698
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 151 (58.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 36/120 (30%), Positives = 52/120 (43%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+ GHR+ V IF + + + SDD VKIW T + GH +
Sbjct: 417 LEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSR 476
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D +R+W G L GH++ VT+++FS L S+S+D T RIWD
Sbjct: 477 LLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSH---DSRLLASASNDQTVRIWD 533
Score = 150 (57.9 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 38/124 (30%), Positives = 53/124 (42%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
++ + GH AV + R + + SDDR VKIW ET + GH D+
Sbjct: 289 LQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHS-DLVRSVIFS 347
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSS-SDDGTC 354
D +++W G L GH V ++ FS QLL+S SDD T
Sbjct: 348 HDSRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDS----QLLASASDDSTV 403
Query: 355 RIWD 358
+IWD
Sbjct: 404 KIWD 407
Score = 138 (53.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 35/120 (29%), Positives = 48/120 (40%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+ GHR+ V IF + + + SDD VKIW T + GH +
Sbjct: 375 LEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQ 434
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D +++W G L GH V ++ FS L S+SDD T RIWD
Sbjct: 435 LLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSH---DSRLLASASDDRTVRIWD 491
Score = 125 (49.1 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 35/121 (28%), Positives = 48/121 (39%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+ GH + V IF R + + SD VKIW T + GH +
Sbjct: 334 LEGHSDLVRSVIFSHDSRLLASASDST-VKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQ 392
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSS-SDDGTCRIW 357
D +++W G L GH V ++ FS QLL+S SDD T +IW
Sbjct: 393 LLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDS----QLLASASDDSTVKIW 448
Query: 358 D 358
D
Sbjct: 449 D 449
Score = 96 (38.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 22/82 (26%), Positives = 34/82 (41%)
Query: 277 CLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFS 336
CL + GHE + D +++W G L GH+ V ++ FS
Sbjct: 288 CLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFS 347
Query: 337 PRPGSVYQLLSSSDDGTCRIWD 358
+LL+S+ D T +IWD
Sbjct: 348 HDS----RLLASASDSTVKIWD 365
Score = 95 (38.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 25/96 (26%), Positives = 48/96 (50%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V +++S D++ + +A D + +W+ GSL H+L GH + + + + ++ SA
Sbjct: 382 VRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSV-IFSHDSQLLASAS 440
Query: 603 YDGKTIVWDIWEGIPIRIYEISRFRDGA-SIILSDD 637
D +WD G ++ + + RD S+I S D
Sbjct: 441 DDSTVKIWDTGTG-SLQ-HTLEGHRDWVRSVIFSHD 474
Score = 94 (38.1 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V +++S D++ + +A D + +W+ GSL H+L GH + + + + R+ SA
Sbjct: 424 VRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSV-IFSHDSRLLASAS 482
Query: 603 YDGKTIVWDIWEG 615
D +WD +G
Sbjct: 483 DDRTVRIWDTEKG 495
Score = 92 (37.4 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVH-PFNPRIAMSA 601
V +++S D+R + +A D + +W+ GS H+L GH S+ V V + R+ SA
Sbjct: 466 VRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGH--SSLVTSVSFSHDSRLLASA 523
Query: 602 GYDGKTIVWDI 612
D +WDI
Sbjct: 524 SNDQTVRIWDI 534
Score = 50 (22.7 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS 452
F+ + + + S D R+W D+++ +H+ L GH + V V FS
Sbjct: 471 FSHDSRLLASASDDRTVRIW--------DTEKGSHK-HTLEGHSSLVTSVSFS 514
Score = 45 (20.9 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHS 577
V + +S D+R + +A D + +W+ SL H+
Sbjct: 508 VTSVSFSHDSRLLASASNDQTVRIWDIEARSLQHT 542
Score = 39 (18.8 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 18/74 (24%), Positives = 31/74 (41%)
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASR 459
F+ + + + S D+ ++W+ + H L GH + V V FS +
Sbjct: 387 FSHDSQLLASASDDSTVKIWDT------GTGSLQH---TLEGHRDWVRSVIFSHDS---- 433
Query: 460 FSLADSSKEDSTPK 473
L S+ +DST K
Sbjct: 434 -QLLASASDDSTVK 446
Score = 37 (18.1 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 5/22 (22%), Positives = 13/22 (59%)
Query: 399 AFNANGTVFVTGSSDTLARVWN 420
+F+ + + + S+D R+W+
Sbjct: 512 SFSHDSRLLASASNDQTVRIWD 533
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 166 (63.5 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 52/199 (26%), Positives = 80/199 (40%)
Query: 222 AIAKPSTMVQKMQN-IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSME---TAYC 277
A+ + + + +Q + + GH ++CA F+ +G+Y+ +GS DR + +W Y
Sbjct: 38 ALIQAAPRLSSLQAPLMELSGHSGEIFCAKFNSAGQYIASGSMDRSILLWRANGDCENYG 97
Query: 278 LASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSP 337
+ S GH G I D D + W L G I GH + ++ S
Sbjct: 98 ILS--GHRGAILDLQWSRDSDIIFSASADMHLASWDLTTGERIRRYVGHEEVINSLDISK 155
Query: 338 RPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFC 397
R + L S SDDGT IWD R + I P AVA +G + I
Sbjct: 156 RGEEI--LFSGSDDGTIGIWDPRKKHAADYIESDFPVTAVAISEAGNEIYSGGIDNDIKV 213
Query: 398 CAFNANGTVF-VTGSSDTL 415
V+ + G DT+
Sbjct: 214 WDVRKKAVVYNMAGHRDTI 232
Score = 107 (42.7 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 34/134 (25%), Positives = 53/134 (39%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVI-TGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
+ I+R GH + + G ++ +GSDD + IW + A + +T
Sbjct: 136 ERIRRYVGHEEVINSLDISKRGEEILFSGSDDGTIGIWDPRKKHA-ADYIESDFPVTAVA 194
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
D I+VW + + + GH +T + SP S LLS + D
Sbjct: 195 ISEAGNEIYSGGIDNDIKVWDVRKKAVVYNMAGHRDTITTLKVSPDSQS---LLSYAMDS 251
Query: 353 TCRIWDARYSQFSP 366
T R WD R F+P
Sbjct: 252 TARTWDIR--PFAP 263
Score = 95 (38.5 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 22/77 (28%), Positives = 32/77 (41%)
Query: 536 ILPTPRGVNM-IVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFN 594
IL RG + + WS D+ + +A D + W+ G + GH E LD+
Sbjct: 98 ILSGHRGAILDLQWSRDSDIIFSASADMHLASWDLTTGERIRRYVGHEEVINSLDISKRG 157
Query: 595 PRIAMSAGYDGKTIVWD 611
I S DG +WD
Sbjct: 158 EEILFSGSDDGTIGIWD 174
Score = 88 (36.0 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 36/118 (30%), Positives = 49/118 (41%)
Query: 336 SPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYI-PRPSDAVAGRNMAPSSSAGPQSHQ 394
S PGS QL+ + G+ Y + S I PR S AP S +
Sbjct: 9 SDDPGSS-QLVKRQNVGSSTARSGGYGESSALIQAAPRLSSL-----QAPLMELSGHSGE 62
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS 452
IFC FN+ G +GS D +W A + D N+ I LSGH + +Q+S
Sbjct: 63 IFCAKFNSAGQYIASGSMDRSILLWRA------NGDCENYGI--LSGHRGAILDLQWS 112
Score = 68 (29.0 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 17/74 (22%), Positives = 33/74 (44%)
Query: 540 PRGV--NMIV--WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNP 595
P G+ N++ W + + V D + +W+ G L + L GH + ++ P
Sbjct: 275 PMGIEKNLVRGGWDKEGKRVAMGAADGTVVIWSNETGKLTYKLPGHKAAVNCVEFSPGTE 334
Query: 596 RIAMSAGYDGKTIV 609
+ +S D KT++
Sbjct: 335 PLILSGSSD-KTLL 347
Score = 38 (18.4 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 439 LSGHENDVNYVQFS 452
L GH+ VN V+FS
Sbjct: 317 LPGHKAAVNCVEFS 330
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 165 (63.1 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 38/138 (27%), Positives = 63/138 (45%)
Query: 226 PSTMVQKMQNIKRVRG-HRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGH 284
P T ++M KR G H + + C I+ S + ++TGS D +W +E+ L S GH
Sbjct: 140 PITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGH 199
Query: 285 EGDIT--DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSV 342
GD+ D D + +W + G + GH + V ++ F P ++
Sbjct: 200 SGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPCGDAI 259
Query: 343 YQLLSSSDDGTCRIWDAR 360
+ SDD +CR++D R
Sbjct: 260 ---ATGSDDSSCRLYDMR 274
Score = 89 (36.4 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 22/66 (33%), Positives = 31/66 (46%)
Query: 401 NANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRF 460
N G FV+GS D +A +W+ + H + GH++DVN V+F C A
Sbjct: 211 NETGNTFVSGSCDRMAFIWDM---------RSGHVVQSFEGHQSDVNSVKFHPCGDAIAT 261
Query: 461 SLADSS 466
DSS
Sbjct: 262 GSDDSS 267
Score = 76 (31.8 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 33/155 (21%), Positives = 61/155 (39%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
K ++GH+ V C + R++I+ S D + IW T + I
Sbjct: 64 KVLKGHQAKVLCTDWSPDKRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPS 123
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLR---G-HTAAVTAIAFSPRPGSVYQLLSSSDDG 352
D + V+ + ++ + G HT+ ++ + P S Q+L+ S D
Sbjct: 124 GNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIY---PNSDQQILTGSGDS 180
Query: 353 TCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSS 387
TC +WD Q + D +A ++AP+ +
Sbjct: 181 TCALWDVESGQLLQSFH-GHSGDVMA-IDLAPNET 213
Score = 69 (29.3 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 21/70 (30%), Positives = 30/70 (42%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
GVN + +S+ R + A D + +W+ V L GH + V P A+S
Sbjct: 290 GVNSVDFSVSGRLLFAGYNDYTVNLWDTLKSERVCLLYGHENKVSCVQVSPDGT--ALST 347
Query: 602 GYDGKTI-VW 610
G TI VW
Sbjct: 348 GSWDYTIRVW 357
Score = 53 (23.7 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 393 HQIFCCAFNANGTVFVTGSSDTLARVW 419
+++ C + +GT TGS D RVW
Sbjct: 331 NKVSCVQVSPDGTALSTGSWDYTIRVW 357
>RGD|1359321 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta polypeptide 4" species:10116 "Rattus norvegicus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0044297 "cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 RGD:1359321 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
GO:GO:0044297 PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 EMBL:AY552804 EMBL:BC097370 EMBL:AF022085 IPI:IPI00422067
RefSeq:NP_001013932.1 UniGene:Rn.10844 ProteinModelPortal:O35353
SMR:O35353 IntAct:O35353 STRING:O35353 PhosphoSite:O35353
PRIDE:O35353 GeneID:294962 KEGG:rno:294962 UCSC:RGD:1359321
InParanoid:O35353 NextBio:638784 ArrayExpress:O35353
Genevestigator:O35353 Uniprot:O35353
Length = 340
Score = 163 (62.4 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 36/127 (28%), Positives = 56/127 (44%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ + GH + C F G+ +IT S D +W +ET + GH GD+
Sbjct: 137 RELPGHTGYLSCCRFLDDGQ-IITSSGDTTCALWDIETGQQTTTFTGHSGDVMSLSLSPD 195
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D ++W + DG+ GH + + A++F P S Y + SDD TCR+
Sbjct: 196 LKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFP---SGYAFATGSDDATCRL 252
Query: 357 WDARYSQ 363
+D R Q
Sbjct: 253 FDLRADQ 259
Score = 70 (29.7 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 18/70 (25%), Positives = 28/70 (40%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G+ + +S R +LA D VW+A G L GH L V +A +
Sbjct: 272 GITSVAFSKSGRLLLAGYDDFNCSVWDALKGGRAGVLAGHDNRVSCLGVTDDGMAVA-TG 330
Query: 602 GYDGKTIVWD 611
+D +W+
Sbjct: 331 SWDSFLRIWN 340
Score = 56 (24.8 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 20/62 (32%), Positives = 29/62 (46%)
Query: 399 AFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNY--VQFSGCAV 456
AF+ +G + + G D VW+A K VL+GH+N V+ V G AV
Sbjct: 277 AFSKSGRLLLAGYDDFNCSVWDALKGG---------RAGVLAGHDNRVSCLGVTDDGMAV 327
Query: 457 AS 458
A+
Sbjct: 328 AT 329
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 179 (68.1 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 41/126 (32%), Positives = 59/126 (46%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
Q ++ GH V C + + YV TGS DR V++W + C+ GH+G I
Sbjct: 619 QPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTF 678
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D + +W + GL + L+GHT V ++ FS R G + L S S D T
Sbjct: 679 SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS-RDGEI--LASGSMDNT 735
Query: 354 CRIWDA 359
R+WDA
Sbjct: 736 VRLWDA 741
Score = 165 (63.1 bits), Expect = 9.8e-11, Sum P(2) = 9.8e-11
Identities = 36/123 (29%), Positives = 56/123 (45%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
+K + GH VY A F Y+++ S+D V++WS++T CL +GH + D
Sbjct: 537 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 596
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D + R+W P+ + GH A V + P S Y + + S D T R
Sbjct: 597 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRY--HPNSNY-VATGSADRTVR 653
Query: 356 IWD 358
+WD
Sbjct: 654 LWD 656
Score = 131 (51.2 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 29/119 (24%), Positives = 51/119 (42%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXX 299
+GH V+ F G Y ++G DR+ ++W+ + L GH D+
Sbjct: 583 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNY 642
Query: 300 XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D +R+W + +G + + GH + ++ FSP G L + + DG +WD
Sbjct: 643 VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPN-GRF--LATGATDGRVLLWD 698
Score = 95 (38.5 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 20/76 (26%), Positives = 36/76 (47%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN + ++ +V D + +W+ +G+ V TGH + L P N R +
Sbjct: 631 VNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP-NGRFLATGA 689
Query: 603 YDGKTIVWDIWEGIPI 618
DG+ ++WDI G+ +
Sbjct: 690 TDGRVLLWDIGHGLMV 705
Score = 87 (35.7 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 35/127 (27%), Positives = 49/127 (38%)
Query: 262 SDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPIS 321
SDD L +I +TA L GH G + D +R+W L +
Sbjct: 521 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLV 580
Query: 322 VLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSP-RIYIPRPSDAVAGR 380
+GH V FSP G Y +S D R+W + Q P RI+ +D R
Sbjct: 581 GYKGHNYPVWDTQFSPY-G--YYFVSGGHDRVARLWATDHYQ--PLRIFAGHLADVNCTR 635
Query: 381 NMAPSSS 387
P+S+
Sbjct: 636 -YHPNSN 641
Score = 80 (33.2 bits), Expect = 9.8e-11, Sum P(2) = 9.8e-11
Identities = 18/69 (26%), Positives = 32/69 (46%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
++ + +S + RF+ D R+ +W+ G +V L GHT++ L + I S
Sbjct: 673 IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR-DGEILASGS 731
Query: 603 YDGKTIVWD 611
D +WD
Sbjct: 732 MDNTVRLWD 740
Score = 61 (26.5 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 391 QSHQIFCCA--FNANGTVFVTGSSDTLARVWNACKPNTD-DSDQPNHEIDVLSGHEN 444
+ H C+ F+ +G + +GS D R+W+A K D ++D + +GH N
Sbjct: 709 KGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLETD----DFTTATGHIN 761
Score = 43 (20.2 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWN 420
I F+ NG TG++D +W+
Sbjct: 673 IHSLTFSPNGRFLATGATDGRVLLWD 698
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 152 (58.6 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 39/128 (30%), Positives = 59/128 (46%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYC--LASCRGHEGDITDXXX 293
I + GH VYC F +G + + DRL+ +W++ C A+ +GH G + +
Sbjct: 49 IMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVY-GDCENYATLKGHSGAVMELHY 107
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLL-SSSDDG 352
D + VW G + L+GHT+ V + F R G QL + SDDG
Sbjct: 108 NTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNS-CFPARRGP--QLACTGSDDG 164
Query: 353 TCRIWDAR 360
T ++WD R
Sbjct: 165 TVKLWDIR 172
Score = 144 (55.7 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 57/219 (26%), Positives = 92/219 (42%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSG-RYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
+ +KR++GH + V R G + TGSDD VK+W + + + + + +
Sbjct: 132 ERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQ-NTYQVLSVT 190
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
D I+VW L I ++GH +VT ++ S GS Y LLS+S D
Sbjct: 191 FNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSA-DGS-Y-LLSNSMDN 247
Query: 353 TCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSS 412
+ R+WD R F+P+ R G N+ + C+++A+G+ GS+
Sbjct: 248 SVRVWDIR--PFAPK---ERCVKIFQG-NVHNFEK------NLLRCSWSADGSKIAAGSA 295
Query: 413 DTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQF 451
D +W+ + L GH VN V F
Sbjct: 296 DRFVYIWDTTTRRI---------VYKLPGHAGSVNEVAF 325
Score = 102 (41.0 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 31/156 (19%), Positives = 64/156 (41%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
+N ++GH AV ++ G + + S D+ V +W ET + +GH +
Sbjct: 90 ENYATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFP 149
Query: 294 XXXXXXXX-XXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
D +++W + + + +T V ++ F+ Q++S D
Sbjct: 150 ARRGPQLACTGSDDGTVKLWDIRKKASVHTFQ-NTYQVLSVTFNDTSD---QIISGGIDN 205
Query: 353 TCRIWDARYSQFSPRIY-IPRPSDAVAGRNMAPSSS 387
++WD R ++ IY + D+V G +++ S
Sbjct: 206 DIKVWDLRQNKL---IYSMQGHGDSVTGLSLSADGS 238
Score = 81 (33.6 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKT 607
WS D + A D + +W+ +V+ L GH S + HP P I +S D +
Sbjct: 283 WSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEP-IVLSGSSDKRL 341
Query: 608 IVWDI 612
+ +I
Sbjct: 342 YIGEI 346
Score = 67 (28.6 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDI 612
+++ +D I VW+ L++S+ GH +S L + + +S D VWDI
Sbjct: 198 IISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYL-LSNSMDNSVRVWDI 254
Score = 48 (22.0 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 1238 DIKPNSLPEVLESDGTNRTSSDRGADGSQRLNAQIDST 1275
D++ N L ++ G + T ADGS L+ +D++
Sbjct: 211 DLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNS 248
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 146 (56.5 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 42/150 (28%), Positives = 64/150 (42%)
Query: 222 AIAKPSTMVQKMQNIKRVR----------GHRNAVYCAIFDRSGRYVITGSDDRLVKIWS 271
++ K T+V + Q + R+R GH AV C F G+ + +GS D V++W
Sbjct: 78 SVEKVLTIVYQQQAVFRIRPVNRCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWD 137
Query: 272 METAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDG-LPISVLRGHTAAV 330
+ T L +C+GH+ + I W G L S L GH +
Sbjct: 138 LYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWI 197
Query: 331 TAIAFSP--RPGSVYQLLSSSDDGTCRIWD 358
T I++ P + ++SS DG RIWD
Sbjct: 198 TGISWEPVHLSSPCRRFVTSSKDGDARIWD 227
Score = 92 (37.4 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 20/73 (27%), Positives = 34/73 (46%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V + WS D+R +L+ D + +W L L GH + + +D P ++ +G
Sbjct: 405 VYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVV--SG 462
Query: 603 YDGKTIVWDIWEG 615
GK V +W+G
Sbjct: 463 --GKDRVLKLWKG 473
Score = 83 (34.3 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN + +S D +++ +A D + +WN G V GH Y + + R+ +S
Sbjct: 363 VNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSA-DSRLLLSGS 421
Query: 603 YDGKTIVWDI 612
D +W+I
Sbjct: 422 KDSTLKIWEI 431
Score = 65 (27.9 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGH 581
V + W D + DC I +W G L+ L GH
Sbjct: 244 VTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLIRELKGH 281
Score = 50 (22.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 9/46 (19%), Positives = 24/46 (52%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLS 440
++ +++A+ + ++GS D+ ++W + D P H +V +
Sbjct: 405 VYQVSWSADSRLLLSGSKDSTLKIWEI-RTKKLKQDLPGHADEVFA 449
Score = 42 (19.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 6/26 (23%), Positives = 15/26 (57%)
Query: 394 QIFCCAFNANGTVFVTGSSDTLARVW 419
++F ++ +G V+G D + ++W
Sbjct: 446 EVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 39 (18.8 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 1465 GHQEYINYSGSREVGPWI 1482
GHQ+ +N+ G WI
Sbjct: 358 GHQQLVNHVYFSPDGKWI 375
>MGI|MGI:104581 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta 4" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISA] [GO:0006184 "GTP catabolic process" evidence=ISA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0044297 "cell body" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 MGI:MGI:104581
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 OMA:GACDATS EMBL:S86124 EMBL:M87286 EMBL:M63658
EMBL:AF277893 EMBL:AF501886 EMBL:AK036816 EMBL:AK152227
EMBL:AK167416 EMBL:BC028753 IPI:IPI00310220 PIR:JS0669
RefSeq:NP_038559.2 UniGene:Mm.139192 ProteinModelPortal:P29387
SMR:P29387 DIP:DIP-604N IntAct:P29387 STRING:P29387
PhosphoSite:P29387 REPRODUCTION-2DPAGE:P29387 PaxDb:P29387
PRIDE:P29387 Ensembl:ENSMUST00000108234 Ensembl:ENSMUST00000155737
GeneID:14696 KEGG:mmu:14696 InParanoid:P29387 NextBio:286647
Bgee:P29387 Genevestigator:P29387 GermOnline:ENSMUSG00000027669
Uniprot:P29387
Length = 340
Score = 163 (62.4 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 36/127 (28%), Positives = 56/127 (44%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ + GH + C F G+ +IT S D +W +ET + GH GD+
Sbjct: 137 RELPGHTGYLSCCRFLDDGQ-IITSSGDTTCALWDIETGQQTTTFTGHSGDVMSLSLSPD 195
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D ++W + DG+ GH + + A++F P S Y + SDD TCR+
Sbjct: 196 LKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFP---SGYAFATGSDDATCRL 252
Query: 357 WDARYSQ 363
+D R Q
Sbjct: 253 FDLRADQ 259
Score = 68 (29.0 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 18/70 (25%), Positives = 28/70 (40%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G+ + +S R +LA D VW+A G L GH L V +A +
Sbjct: 272 GITSVAFSKSGRLLLAGYDDFNCSVWDALKGGRSGVLAGHDNRVSCLGVTDDGMAVA-TG 330
Query: 602 GYDGKTIVWD 611
+D +W+
Sbjct: 331 SWDSFLRIWN 340
Score = 56 (24.8 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 20/62 (32%), Positives = 29/62 (46%)
Query: 399 AFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNY--VQFSGCAV 456
AF+ +G + + G D VW+A K VL+GH+N V+ V G AV
Sbjct: 277 AFSKSGRLLLAGYDDFNCSVWDALKGGRSG---------VLAGHDNRVSCLGVTDDGMAV 327
Query: 457 AS 458
A+
Sbjct: 328 AT 329
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 151 (58.2 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 35/125 (28%), Positives = 53/125 (42%)
Query: 238 RVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXX 297
R+ GHR V F GR + + S D +++W + + CL +GH+ +
Sbjct: 63 RLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDS 122
Query: 298 XXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIW 357
D VW + G + +L GH ++ + FSP S L + S D T IW
Sbjct: 123 KQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDS---LATGSWDSTVHIW 179
Query: 358 DARYS 362
D R S
Sbjct: 180 DLRAS 184
Score = 149 (57.5 bits), Expect = 4.9e-10, Sum P(3) = 4.9e-10
Identities = 42/157 (26%), Positives = 68/157 (43%)
Query: 236 IKRVR--G-HRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
+ RVR G H V C+ F GR ++T SDD V +W ++ L GH G +
Sbjct: 16 VGRVRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCC 75
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
D IR+W + + VL+GH +V ++FSP QL S D
Sbjct: 76 FSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSP---DSKQLASGGWDK 132
Query: 353 TCRIWDARYSQFSPRIYI-PRPSDAVAGRNMAPSSSA 388
+W+ Q R+++ D++ + +P+S +
Sbjct: 133 RAIVWEV---QSGRRVHLLVGHCDSIQSSDFSPTSDS 166
Score = 102 (41.0 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 23/81 (28%), Positives = 37/81 (45%)
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
R V + +S D++ + + D R VW G VH L GH +S D P + +A +
Sbjct: 111 RSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLA-T 169
Query: 601 AGYDGKTIVWDIWEGIPIRIY 621
+D +WD+ P+ Y
Sbjct: 170 GSWDSTVHIWDLRASTPVVSY 190
Score = 90 (36.7 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 34/162 (20%), Positives = 65/162 (40%)
Query: 211 HRAPSIRAACYA-----IAKPSTMVQ-KMQNIKR------VRGHRNAVYCAIFDRSGRYV 258
HR P +++ C++ IA S+ ++ ++ R ++GH+ +V F + +
Sbjct: 67 HRGP-VKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQL 125
Query: 259 ITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGL 318
+G D+ +W +++ + GH I D + +W L
Sbjct: 126 ASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRAST 185
Query: 319 PISV---LRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIW 357
P+ L GHT ++ + +S G L S S D T +W
Sbjct: 186 PVVSYHNLEGHTGNISCLCYSAS-GL---LASGSWDKTICVW 223
Score = 78 (32.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 21/55 (38%), Positives = 24/55 (43%)
Query: 561 DCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWEG 615
D ICVW +L L GHT L P ++A SAGY VWD G
Sbjct: 217 DKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLA-SAGYSRTVKVWDCLTG 270
Score = 66 (28.3 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 398 CAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS 452
C F+ +G + + SSD R+W+ + + VL GH+ V V FS
Sbjct: 74 CCFSPDGRLIASSSSDHSIRLWDVARSKC---------LHVLKGHQRSVETVSFS 119
Score = 40 (19.1 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTG 580
VN + +S D + +A + VW+ G + +L G
Sbjct: 241 VNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKG 278
Score = 38 (18.4 bits), Expect = 4.9e-10, Sum P(3) = 4.9e-10
Identities = 12/53 (22%), Positives = 23/53 (43%)
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS 452
F+ TGS D+ +W+ + +T N L GH +++ + +S
Sbjct: 160 FSPTSDSLATGSWDSTVHIWDL-RASTPVVSYHN-----LEGHTGNISCLCYS 206
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 155 (59.6 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 41/159 (25%), Positives = 68/159 (42%)
Query: 222 AIAKPSTMVQKM-QNIKR-VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLA 279
A +P ++ Q++ R V + AV F+ G Y++T D+ +K+WS+ L
Sbjct: 2 AFPQPRPQAPQLPQHLWRTVDCQQGAVRAVRFNADGNYLLTCGSDKSLKLWSVSRGTLLK 61
Query: 280 SCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRP 339
+ GH ++ D D + +W + G LRGH V + F+
Sbjct: 62 TYSGHGYEVLDADGSYDNSQLCSCSSDKTVILWDVASGQVTRKLRGHAGKVNCVQFNEE- 120
Query: 340 GSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVA 378
+V +LS S DGT R WD R + P + D ++
Sbjct: 121 ATV--MLSGSIDGTVRCWDTRSRRMEPIQILDESQDGIS 157
Score = 74 (31.1 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 17/74 (22%), Positives = 34/74 (45%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRI-AMSA 601
+ + +S D + L++ +D + + + + G ++ +GH Y LD + +S
Sbjct: 194 ITCVCFSRDGQCTLSSSLDSTVRLLDKSTGEMLGEYSGHVNKGYKLDCCLTDKDTHVLSC 253
Query: 602 GYDGKTIVWDIWEG 615
DG WD+ EG
Sbjct: 254 SEDGHVYYWDLVEG 267
Score = 65 (27.9 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 17/56 (30%), Positives = 24/56 (42%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVW 610
VL+ D + W+ +GSL L L HP PR+ S +G+ VW
Sbjct: 250 VLSCSEDGHVYYWDLVEGSLTLKLPVGKAVVQSLSFHPTEPRLLTSM--EGRVQVW 303
Score = 39 (18.8 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 5/14 (35%), Positives = 9/14 (64%)
Query: 483 NIVTCSRDGSAIIW 496
++++CS DG W
Sbjct: 249 HVLSCSEDGHVYYW 262
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 141 (54.7 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 38/128 (29%), Positives = 55/128 (42%)
Query: 239 VRGHRNAVYCAIFDRS-GRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXX 297
+ GH + A F S ++TGS D ++W +T +A+ +GH ++
Sbjct: 130 MNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDA 189
Query: 298 XXXXXXXXDCIIRVWRLPDGLPIS-VLRGHTAAVTAIAFSP---RPGS-VYQLLSSSDDG 352
D IR W G PI LR HT + A+ + P P S Y L S S D
Sbjct: 190 SIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDN 249
Query: 353 TCRIWDAR 360
T RIW+ +
Sbjct: 250 TVRIWNVK 257
Score = 128 (50.1 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 36/139 (25%), Positives = 60/139 (43%)
Query: 247 YCAIFDRSGRYVITGSDDRLVKIWS-METAYCLASCRGHEGDITDXXXXXXXXXXXXXXX 305
Y A +SG +++ SDD + +W ++ + GH+ +
Sbjct: 350 YEACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASF 409
Query: 306 DCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFS 365
D +R+W G ++ LRGH AAV A+S L+SSS D T ++WD R +
Sbjct: 410 DSSVRLWDGKTGKFLATLRGHVAAVYQCAWST---DSRLLVSSSQDTTLKVWDVRSKKM- 465
Query: 366 PRIYIPRPSDAVAGRNMAP 384
+ +P D V + +P
Sbjct: 466 -KFDLPGHEDQVFAVDWSP 483
Score = 126 (49.4 bits), Expect = 0.00048, P = 0.00048
Identities = 35/122 (28%), Positives = 51/122 (41%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
I ++ GH+ V A F GR + T S D V++W +T LA+ RGH +
Sbjct: 382 ITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWST 441
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D ++VW + L GH V A+ +SP G ++ S D R
Sbjct: 442 DSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSP-DGQ--RVASGGADKAVR 498
Query: 356 IW 357
IW
Sbjct: 499 IW 500
Score = 115 (45.5 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 39/145 (26%), Positives = 61/145 (42%)
Query: 277 CLASCRGHEGDITDXXXX-XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAF 335
C AS GH+G I D R+W PI+ ++GHT V+ +A+
Sbjct: 126 CTASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAW 185
Query: 336 SPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQI 395
+P S+ + + S D T R WD + SP DA+ R+ P + Q +
Sbjct: 186 AP-DASI--IATGSMDNTIRFWDPKKG--SPI------GDALR-RHTKPIMALCWQPLHL 233
Query: 396 FCCAFNANGTVFVTGSSDTLARVWN 420
A ++ + +GS D R+WN
Sbjct: 234 ---APDSGPYLLASGSKDNTVRIWN 255
Score = 114 (45.2 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 48/184 (26%), Positives = 77/184 (41%)
Query: 254 SGRYVI-TGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVW 312
SG Y++ +GS D V+IW+++ L + GH IT D IR+W
Sbjct: 237 SGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPIT-CVRWGGQNWIYSSSYDKTIRIW 295
Query: 313 RLPDGLPISVLRGHTAAVTAIAFSP----RPGSV----YQLLSSSDDG--TCRIWDARYS 362
DG + +L+GH A V ++ S R G+ ++ S SD+ ++A
Sbjct: 296 DAKDGKCLHILKGHAARVNHLSLSTEHVLRSGAYDHTDFKPKSFSDERRKAKERYEACLK 355
Query: 363 QFSPRIYIPRPSDAVAGRNMAPSSSAGP----QSHQ--IFCCAFNANGTVFVTGSSDTLA 416
Q R+ SD + P S P HQ + +F+ +G T S D+
Sbjct: 356 QSGERLV--SASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSV 413
Query: 417 RVWN 420
R+W+
Sbjct: 414 RLWD 417
Score = 109 (43.4 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 35/133 (26%), Positives = 51/133 (38%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASC-RGHEGDIT----- 289
I ++GH N V C + + TGS D ++ W + + R H I
Sbjct: 170 IATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQ 229
Query: 290 --DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLS 347
D +R+W + + L GHTA +T + R G + S
Sbjct: 230 PLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCV----RWGGQNWIYS 285
Query: 348 SSDDGTCRIWDAR 360
SS D T RIWDA+
Sbjct: 286 SSYDKTIRIWDAK 298
Score = 97 (39.2 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 23/78 (29%), Positives = 36/78 (46%)
Query: 537 LPTPRG----VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHP 592
L T RG V WS D+R ++++ D + VW+ + L GH + + +D P
Sbjct: 424 LATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSP 483
Query: 593 FNPRIAMSAGYDGKTIVW 610
R+A S G D +W
Sbjct: 484 DGQRVA-SGGADKAVRIW 500
Score = 82 (33.9 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 19/70 (27%), Positives = 32/70 (45%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN +S D R + A D + +W+ G + +L GH + Y + R+ +S+
Sbjct: 392 VNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQC-AWSTDSRLLVSSS 450
Query: 603 YDGKTIVWDI 612
D VWD+
Sbjct: 451 QDTTLKVWDV 460
Score = 68 (29.0 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 26/94 (27%), Positives = 44/94 (46%)
Query: 347 SSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTV 406
S S DG C I A + S R++ D G+ +A + G + ++ CA++ + +
Sbjct: 396 SFSPDGRC-IATASFDS-SVRLW-----DGKTGKFLA--TLRGHVA-AVYQCAWSTDSRL 445
Query: 407 FVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLS 440
V+ S DT +VW+ + D P HE V +
Sbjct: 446 LVSSSQDTTLKVWDV-RSKKMKFDLPGHEDQVFA 478
Score = 48 (22.0 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 28/116 (24%), Positives = 48/116 (41%)
Query: 403 NGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS--G-CAVASR 459
+G V+ S D +W+ K S +P I + GH+ VN+ FS G C +
Sbjct: 357 SGERLVSASDDLQLILWDPQK-----STKP---ITKMHGHQKVVNHASFSPDGRCIATAS 408
Query: 460 FSLADSSKEDSTPKF------------KNSWFCHDNI-VTCSRDGSAIIWIPRSRR 502
F + + T KF + +W + V+ S+D + +W RS++
Sbjct: 409 FDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKK 464
Score = 46 (21.3 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 394 QIFCCAFNANGTVFVTGSSDTLARVWN 420
Q+F ++ +G +G +D R+W+
Sbjct: 475 QVFAVDWSPDGQRVASGGADKAVRIWS 501
Score = 37 (18.1 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 6/35 (17%), Positives = 19/35 (54%)
Query: 1438 SWLMLSTHEEGSRYIPQLGDEVVYLRQGHQEYINY 1472
+W+ S++++ R + +++ +GH +N+
Sbjct: 281 NWIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNH 315
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 162 (62.1 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 39/125 (31%), Positives = 55/125 (44%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
++ GH + + F SG+Y+ T S D+ ++W + T L GH +
Sbjct: 332 LQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQ 391
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D + RVW L G I V +GH V ++ FSP G Y L S +D CR
Sbjct: 392 DGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPN-G--YHLASGGEDNQCR 448
Query: 356 IWDAR 360
IWD R
Sbjct: 449 IWDLR 453
Score = 107 (42.7 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 30/112 (26%), Positives = 48/112 (42%)
Query: 248 CAIFDRSGRYVITGSDDRLVKIWSM-ETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXD 306
C+ F R G+ + T S + K+W M + +A + H+ TD D
Sbjct: 261 CS-FSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASAD 319
Query: 307 CIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
++W+ DG + GH + +AF P Y L ++S D T R+WD
Sbjct: 320 RTAKLWKT-DGTLLQTFEGHLDRLARVAF--HPSGKY-LGTTSYDKTWRLWD 367
Score = 104 (41.7 bits), Expect = 9.1e-05, Sum P(3) = 9.1e-05
Identities = 36/151 (23%), Positives = 56/151 (37%)
Query: 212 RAPSIRAACY--AIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKI 269
R I A C + K M Q I ++ H+ +F + T S DR K+
Sbjct: 265 RDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKL 324
Query: 270 WSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAA 329
W + L + GH + D R+W + G + + GH+ +
Sbjct: 325 WKTDGTL-LQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRS 383
Query: 330 VTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
V IAF + G++ S D R+WD R
Sbjct: 384 VYGIAFQ-QDGAL--AASCGLDSLARVWDLR 411
Score = 76 (31.8 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 554 FVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVW 610
F+ A D ++ +W+ D SLV SL GH LD+ + IA + +D +W
Sbjct: 480 FLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIA-TVSHDRTIKLW 535
Score = 54 (24.1 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 18/61 (29%), Positives = 26/61 (42%)
Query: 392 SHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQF 451
S ++ AF +G + + D+LARVW+ + I V GH V V F
Sbjct: 381 SRSVYGIAFQQDGALAASCGLDSLARVWDL---------RTGRSILVFQGHIKPVFSVNF 431
Query: 452 S 452
S
Sbjct: 432 S 432
Score = 52 (23.4 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 15/62 (24%), Positives = 29/62 (46%)
Query: 378 AGRNMA-PSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEI 436
+GR+ + S AG +S ++ A+ + T S D ++W + DD D+ +
Sbjct: 494 SGRDFSLVKSLAGHES-KVASLDITADSSCIATVSHDRTIKLWTSS--GNDDEDEEKETM 550
Query: 437 DV 438
D+
Sbjct: 551 DI 552
Score = 50 (22.7 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 391 QSH--QIFCCAFNANGTVFVTGSSDTLARVWN 420
Q H +F F+ NG +G D R+W+
Sbjct: 420 QGHIKPVFSVNFSPNGYHLASGGEDNQCRIWD 451
Score = 42 (19.8 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 11/49 (22%), Positives = 18/49 (36%)
Query: 562 CRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVW 610
CRI W+ ++ + H + P +A YD K +W
Sbjct: 447 CRI--WDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIW 493
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 156 (60.0 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 37/126 (29%), Positives = 62/126 (49%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSM---ETAYCLASCRGHEGDITDXX 292
I+ + GH N VY +F+ V +GS D +++W E C+A +GH +T
Sbjct: 411 IRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTS-LTSGM 469
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
D +RVW + +G + +L GH +A+T++ + R + +SSDDG
Sbjct: 470 QLRGNILVSCNA-DSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRN----MVATSSDDG 524
Query: 353 TCRIWD 358
T ++WD
Sbjct: 525 TVKLWD 530
Score = 153 (58.9 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 55/241 (22%), Positives = 98/241 (40%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+RGH + V + ++TGSDD +K+W ++ + + GH G +
Sbjct: 251 LRGHEDHVITCMQIHDD-VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGR 309
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D ++VW DG + L+GHT+ V +A + GS+ L++ S D T R+WD
Sbjct: 310 YIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA---GSI--LVTGSRDTTLRVWD 364
Query: 359 A----------------RYSQFSPRIYIPRPSDAV-----AGRNMAPSSSAGPQSHQIFC 397
R QF + D A + G +++++
Sbjct: 365 VESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTG-HNNRVYS 423
Query: 398 CAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVA 457
F + ++ +GS DT RVW+ +P + + +L GH + + +Q G +
Sbjct: 424 LLFESERSIVCSGSLDTSIRVWDFTRPEGQEC------VALLQGHTSLTSGMQLRGNILV 477
Query: 458 S 458
S
Sbjct: 478 S 478
Score = 151 (58.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 38/132 (28%), Positives = 62/132 (46%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
V+ +++ + GH AV C FD G V++G D VKIW+ T C+ + GH +
Sbjct: 365 VESGRHLATLHGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVY 422
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRL--PDGLP-ISVLRGHTAAVTAIAFSPRPGSVYQLL 346
D IRVW P+G +++L+GHT+ + + G++ L+
Sbjct: 423 SLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR---GNI--LV 477
Query: 347 SSSDDGTCRIWD 358
S + D R+WD
Sbjct: 478 SCNADSHVRVWD 489
Score = 86 (35.3 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 550 LDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIV 609
L +++ D + VW+ +G+ VH L+GH + + + F + ++ DG +
Sbjct: 471 LRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSA--ITSLQWFGRNMVATSSDDGTVKL 528
Query: 610 WDIWEGIPIR 619
WDI G IR
Sbjct: 529 WDIERGALIR 538
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 156 (60.0 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 37/126 (29%), Positives = 62/126 (49%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSM---ETAYCLASCRGHEGDITDXX 292
I+ + GH N VY +F+ V +GS D +++W E C+A +GH +T
Sbjct: 411 IRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTS-LTSGM 469
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
D +RVW + +G + +L GH +A+T++ + R + +SSDDG
Sbjct: 470 QLRGNILVSCNA-DSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRN----MVATSSDDG 524
Query: 353 TCRIWD 358
T ++WD
Sbjct: 525 TVKLWD 530
Score = 153 (58.9 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 55/241 (22%), Positives = 98/241 (40%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+RGH + V + ++TGSDD +K+W ++ + + GH G +
Sbjct: 251 LRGHEDHVITCMQIHDD-VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGR 309
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D ++VW DG + L+GHT+ V +A + GS+ L++ S D T R+WD
Sbjct: 310 YIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA---GSI--LVTGSRDTTLRVWD 364
Query: 359 A----------------RYSQFSPRIYIPRPSDAV-----AGRNMAPSSSAGPQSHQIFC 397
R QF + D A + G +++++
Sbjct: 365 VESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTG-HNNRVYS 423
Query: 398 CAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVA 457
F + ++ +GS DT RVW+ +P + + +L GH + + +Q G +
Sbjct: 424 LLFESERSIVCSGSLDTSIRVWDFTRPEGQEC------VALLQGHTSLTSGMQLRGNILV 477
Query: 458 S 458
S
Sbjct: 478 S 478
Score = 151 (58.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 38/132 (28%), Positives = 62/132 (46%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
V+ +++ + GH AV C FD G V++G D VKIW+ T C+ + GH +
Sbjct: 365 VESGRHLATLHGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVY 422
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRL--PDGLP-ISVLRGHTAAVTAIAFSPRPGSVYQLL 346
D IRVW P+G +++L+GHT+ + + G++ L+
Sbjct: 423 SLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR---GNI--LV 477
Query: 347 SSSDDGTCRIWD 358
S + D R+WD
Sbjct: 478 SCNADSHVRVWD 489
Score = 86 (35.3 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 550 LDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIV 609
L +++ D + VW+ +G+ VH L+GH + + + F + ++ DG +
Sbjct: 471 LRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSA--ITSLQWFGRNMVATSSDDGTVKL 528
Query: 610 WDIWEGIPIR 619
WDI G IR
Sbjct: 529 WDIERGALIR 538
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 137 (53.3 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 36/124 (29%), Positives = 54/124 (43%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+ GH AV F +G+Y+ +GS D V+ W + T + +GH +
Sbjct: 123 LEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGK 182
Query: 299 XXXXXXXDCIIRVWRLPDGLPIS-VLRGHTAAVTAIAFSP---RPGSVYQLLSSSDDGTC 354
+ I +W G I VL GH+ +T + + P P Y L S+S DG+
Sbjct: 183 KLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRY-LASASKDGSI 241
Query: 355 RIWD 358
RIWD
Sbjct: 242 RIWD 245
Score = 100 (40.3 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V I WS D+R +++ D + VW+A L L GH + + D P R+A S G
Sbjct: 430 VYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVA-SGG 488
Query: 603 YDGKTIVW 610
D +W
Sbjct: 489 KDKCLRIW 496
Score = 94 (38.1 bits), Expect = 7.7e-10, Sum P(3) = 7.7e-10
Identities = 20/69 (28%), Positives = 33/69 (47%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
+N +++S D R + +A D I +W G + SL GH + Y + + R+ +S
Sbjct: 388 INQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQI-AWSADSRLLVSGS 446
Query: 603 YDGKTIVWD 611
D VWD
Sbjct: 447 SDSTLKVWD 455
Score = 88 (36.0 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 23/81 (28%), Positives = 32/81 (39%)
Query: 256 RYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLP 315
RY+ + S D ++IW C GH +T D I+VWR
Sbjct: 230 RYLASASKDGSIRIWDTLMGRCDKILTGHTQSVT-CVKWGGDGLLYSSSQDRTIKVWRSQ 288
Query: 316 DGLPISVLRGHTAAVTAIAFS 336
DG+ L+GH V +A S
Sbjct: 289 DGILCRTLQGHAHWVNTMALS 309
Score = 86 (35.3 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 31/124 (25%), Positives = 49/124 (39%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASC-RGHEGDIT-----DXXX 293
+GHR+ V + G+ + +G + + +W T + GH IT
Sbjct: 166 KGHRHWVLSIAWSPDGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHI 225
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D IR+W G +L GHT +VT + + G +Y SSS D T
Sbjct: 226 NPECRYLASASKDGSIRIWDTLMGRCDKILTGHTQSVTCVKWGG-DGLLY---SSSQDRT 281
Query: 354 CRIW 357
++W
Sbjct: 282 IKVW 285
Score = 73 (30.8 bits), Expect = 0.00077, Sum P(3) = 0.00077
Identities = 21/82 (25%), Positives = 30/82 (36%)
Query: 277 CLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFS 336
C +S GH + D +R W L P +GH V +IA+S
Sbjct: 119 CTSSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWS 178
Query: 337 PRPGSVYQLLSSSDDGTCRIWD 358
P G +L S + +WD
Sbjct: 179 P-DGK--KLASGCKNSQIFLWD 197
Score = 69 (29.3 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 36/130 (27%), Positives = 50/130 (38%)
Query: 553 RFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDI 612
R++ +A D I +W+ G LTGHT+S V V + S+ D VW
Sbjct: 230 RYLASASKDGSIRIWDTLMGRCDKILTGHTQS--VTCVKWGGDGLLYSSSQDRTIKVWRS 287
Query: 613 WEGIPIRIYEISRFRDGASIILSDDVGQLYILNTGQGESQKDAKYDQFFLGDYRPL---V 669
+GI R + ++ LS D Y+L TG E + Q G L
Sbjct: 288 QDGILCRTLQ-GHAHWVNTMALSTD----YVLRTGAFEPAEATINPQDMSGSLAELKDKA 342
Query: 670 QDTYGNVLDQ 679
Q Y V Q
Sbjct: 343 QQRYDKVRGQ 352
Score = 63 (27.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 14/46 (30%), Positives = 27/46 (58%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLS 440
++ A++A+ + V+GSSD+ +VW+A + D P H +V +
Sbjct: 430 VYQIAWSADSRLLVSGSSDSTLKVWDA-ETKKLAIDLPGHADEVFA 474
Score = 46 (21.3 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 23/89 (25%), Positives = 34/89 (38%)
Query: 409 TGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKE 468
+ S D R+W+ D +L+GH V V++ G L SS +
Sbjct: 234 SASKDGSIRIWDTLMGRCDK---------ILTGHTQSVTCVKWGGDG------LLYSSSQ 278
Query: 469 DSTPKFKNSWFCHDNIVTCSRDGSAIIWI 497
D T K W D I+ + G A W+
Sbjct: 279 DRTIKV---WRSQDGILCRTLQGHAH-WV 303
Score = 40 (19.1 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 6/26 (23%), Positives = 13/26 (50%)
Query: 394 QIFCCAFNANGTVFVTGSSDTLARVW 419
++F ++ +G +G D R+W
Sbjct: 471 EVFATDWSPDGQRVASGGKDKCLRIW 496
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 146 (56.5 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 37/117 (31%), Positives = 57/117 (48%)
Query: 242 HRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXX 301
H N V CA F GR +++ SDD+ VK+W + C+ S H G +T
Sbjct: 144 HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIA 203
Query: 302 XXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D ++VW + + H+AAV A++F P G+ Y L+++S D T +I D
Sbjct: 204 AAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPS-GN-Y-LITASSDSTLKILD 257
Score = 142 (55.0 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 36/129 (27%), Positives = 61/129 (47%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ +GHR+AV C F + +++ +GS D + IW M+ GH+ +T
Sbjct: 13 RHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPS 72
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPIS-VLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D +R+W +P+ S V R HTA V ++ F G + L+++SDD T +
Sbjct: 73 GHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCS-DGQL--LVTASDDKTVK 128
Query: 356 IWDARYSQF 364
+W +F
Sbjct: 129 VWSTHRQRF 137
Score = 86 (35.3 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKT 607
+S D R +++A D + +W+ VHS H +D HP IA +AG D
Sbjct: 153 FSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIA-AAGMDNTV 211
Query: 608 IVWD 611
VWD
Sbjct: 212 KVWD 215
Score = 68 (29.0 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 26/114 (22%), Positives = 46/114 (40%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWE 614
+ AA MD + VW+ LV H+ + L HP + ++A D + D+ E
Sbjct: 202 IAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHP-SGNYLITASSDSTLKILDLME 260
Query: 615 GIPIRIYEISRFRDGASIILSDDVGQLYILNTGQGESQK--DAKYDQFFLGDYR 666
G +Y + + A+ + G+ Y + G E + +D GD +
Sbjct: 261 GR--LLYTLHGHQGPATTVAFSRTGE-YFASGGSDEQVMVWKSNFDTVDYGDMK 311
Score = 55 (24.4 bits), Expect = 6.7e-08, Sum P(3) = 6.7e-08
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN + + +++ A D + + + +G L+++L GH + A S G
Sbjct: 232 VNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFA-SGG 290
Query: 603 YDGKTIVW 610
D + +VW
Sbjct: 291 SDEQVMVW 298
Score = 52 (23.4 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 399 AFNANGTVFVTGSSDTLARVWNACKPNTDDSD 430
AF+ G F +G SD VW K N D D
Sbjct: 278 AFSRTGEYFASGGSDEQVMVW---KSNFDTVD 306
Score = 50 (22.7 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 17/65 (26%), Positives = 28/65 (43%)
Query: 397 CCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHE-IDVLSGHENDVNYVQF--SG 453
C F+ +G + V+ S D ++W D+ + E + H V YV F SG
Sbjct: 150 CAKFSPDGRLIVSASDDKTVKLW----------DKTSRECVHSYCEHGGFVTYVDFHPSG 199
Query: 454 CAVAS 458
+A+
Sbjct: 200 TCIAA 204
Score = 44 (20.5 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 14/65 (21%), Positives = 30/65 (46%)
Query: 1404 TVGLRSTRNRR-TSYLFCDSSPIDRRKTHQSLRKGSWLMLSTHEEGSRYIPQLGDEVVYL 1462
TV + TR R + S+ ++ H S G++L+ ++ + + + + ++Y
Sbjct: 210 TVKVWDTRTHRLVQHYQLHSAAVNALSFHPS---GNYLITASSDSTLKILDLMEGRLLYT 266
Query: 1463 RQGHQ 1467
GHQ
Sbjct: 267 LHGHQ 271
Score = 39 (18.8 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 6/21 (28%), Positives = 10/21 (47%)
Query: 400 FNANGTVFVTGSSDTLARVWN 420
F+ +GT D +VW+
Sbjct: 195 FHPSGTCIAAAGMDNTVKVWD 215
Score = 39 (18.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 399 AFNANGTVFVTGSSDTLARV 418
+F+ +G +T SSD+ ++
Sbjct: 236 SFHPSGNYLITASSDSTLKI 255
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 157 (60.3 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 36/127 (28%), Positives = 53/127 (41%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ + GH + C F +IT S D +W +ET GH GD+
Sbjct: 93 RELPGHTGYLSCCRF-LDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPD 151
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D I++W + D + GH + + A+AF P G Y + SDD TCR+
Sbjct: 152 GRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPN-G--YAFTTGSDDATCRL 208
Query: 357 WDARYSQ 363
+D R Q
Sbjct: 209 FDLRADQ 215
Score = 123 (48.4 bits), Expect = 0.00039, P = 0.00039
Identities = 34/122 (27%), Positives = 52/122 (42%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH V GR ++G+ D +K+W + + C + GHE DI
Sbjct: 138 GHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAF 197
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHT---AAVTAIAFSPRPGSVYQLLSSSDDGTCRIW 357
D R++ L + ++ H +T++AFS R G + LL+ DD C IW
Sbjct: 198 TTGSDDATCRLFDLRADQEL-LMYSHDNIICGITSVAFS-RSGRL--LLAGYDDFNCNIW 253
Query: 358 DA 359
DA
Sbjct: 254 DA 255
Score = 67 (28.6 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 17/70 (24%), Positives = 28/70 (40%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G+ + +S R +LA D +W+A G L GH L V +A +
Sbjct: 228 GITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVA-TG 286
Query: 602 GYDGKTIVWD 611
+D +W+
Sbjct: 287 SWDSFLKIWN 296
Score = 59 (25.8 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 399 AFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNY--VQFSGCAV 456
AF+ +G + + G D +W+A K D+ VL+GH+N V+ V G AV
Sbjct: 233 AFSRSGRLLLAGYDDFNCNIWDAMK-----GDRAG----VLAGHDNRVSCLGVTDDGMAV 283
Query: 457 AS 458
A+
Sbjct: 284 AT 285
Score = 55 (24.4 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 355 RIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDT 414
R+ A Y F+ I+ DA+ G AG +++ C +G TGS D+
Sbjct: 239 RLLLAGYDDFNCNIW-----DAMKGDRAGVL--AG-HDNRVSCLGVTDDGMAVATGSWDS 290
Query: 415 LARVWN 420
++WN
Sbjct: 291 FLKIWN 296
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 148 (57.2 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 37/118 (31%), Positives = 54/118 (45%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH +V C + R++ T S D +KIWS T + GH I+
Sbjct: 52 GHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYL 111
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D IR+W + L+GHT V++I F+P G++ L+S S D T RIW+
Sbjct: 112 ASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPL-GTL--LVSGSWDETVRIWN 166
Score = 135 (52.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 31/124 (25%), Positives = 55/124 (44%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASC-RGHEGDITDXXXXXXXXX 299
GH + + +Y+ + SDD+ ++IW E C C +GH ++
Sbjct: 94 GHYRGISQVKWATGSKYLASASDDKTIRIWDFEKR-CSVRCLKGHTNYVSSIDFNPLGTL 152
Query: 300 XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA 359
D +R+W L DG + +L H+ + +++ S G++ ++S DG RIWD
Sbjct: 153 LVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISA-DGTL--CATASYDGMARIWDV 209
Query: 360 RYSQ 363
Q
Sbjct: 210 LSGQ 213
Score = 82 (33.9 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 561 DCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWEG 615
D + +WN DG+ + L H+E + + + + +A YDG +WD+ G
Sbjct: 159 DETVRIWNLQDGTCLRMLPAHSEPIISVSISA-DGTLCATASYDGMARIWDVLSG 212
Score = 59 (25.8 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 392 SHQIFCCAFNANGTVFVTGSSDTLARVWN 420
S I + +A+GT+ T S D +AR+W+
Sbjct: 180 SEPIISVSISADGTLCATASYDGMARIWD 208
Score = 38 (18.4 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 8/37 (21%), Positives = 19/37 (51%)
Query: 551 DNR-FVLAAIMDCRICVWNAADGSLVHSLTGHTESTY 586
+NR ++L + ++ +I +W+ +V H + Y
Sbjct: 233 ENRKYLLVSNLNSQIRLWDYRRNRVVRIFDSHVNTRY 269
Score = 37 (18.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 6/16 (37%), Positives = 8/16 (50%)
Query: 404 GTVFVTGSSDTLARVW 419
G +T +D RVW
Sbjct: 349 GPFIITSGTDPYVRVW 364
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 159 (61.0 bits), Expect = 3.8e-10, Sum P(3) = 3.8e-10
Identities = 43/175 (24%), Positives = 69/175 (39%)
Query: 188 PHMYADQVR-GLGLREI-GGG-FTRHHRAPSIRAACYAIAKPSTMVQKMQNIKR-VRGHR 243
PH R L++ GGG F I AC + + + ++K + G
Sbjct: 3 PHSLKKNYRCSRSLKQFYGGGPFIVSSDGSFIACACGDVI--NIVDSTDSSVKSTIEGES 60
Query: 244 NAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXX 303
+ + + + + R +++W +ET C+ S +GHEG +
Sbjct: 61 DTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATA 120
Query: 304 XXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D + VW + G RGH V++I F P L+S SDD T R+WD
Sbjct: 121 GADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNI-LISGSDDATVRVWD 174
Score = 120 (47.3 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 50/223 (22%), Positives = 90/223 (40%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
++ ++ I+ +GH V SG + T DR V +W ++ +C RGH+G ++
Sbjct: 89 LETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVS 148
Query: 290 DXXXX--XXXXXXXXXXXDCIIRVWRL----PDGLPISVLRGHTAAVTAIAFSPRPGSVY 343
D +RVW L + ++++ H +AVT+IA S G
Sbjct: 149 SILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALS-EDGLT- 206
Query: 344 QLLSSSDDGTCRIWDAR-YS-QFSPRIY-IPRPSDAVAGRNMAPSSSAGPQSHQIFCCAF 400
L S+ D +WD YS + + Y + V+ S A +
Sbjct: 207 -LFSAGRDKVVNLWDLHDYSCKATVATYEVLEAVTTVSSGTPFASFVASLDQKKSKKKES 265
Query: 401 NANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHE 443
++ T F+T + R+W + + + +Q + +I V S E
Sbjct: 266 DSQATYFITVGERGVVRIWKS-EGSICLYEQKSSDITVSSDDE 307
Score = 85 (35.0 bits), Expect = 3.8e-10, Sum P(3) = 3.8e-10
Identities = 51/228 (22%), Positives = 89/228 (39%)
Query: 398 CAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLS---GHENDVNYVQFSGC 454
C ++ + VTGS D R+WNA + H D+L+ ++ +V SG
Sbjct: 410 CVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGT-GHNGDILAVAFAKKSFSFFVSGSGD 468
Query: 455 AVASRFSLADSSKEDSTP---KFKNSWFCHD---NIVTCSRDGSAIIWIPRSRRSHPKAA 508
+SL S++ P K ++ HD N V +R+ S + R A+
Sbjct: 469 RTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRT----AS 524
Query: 509 RWTQAYHLKVXXXXXXXXXXXXXXXXXILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWN 568
W + V R + + +S ++ V+ A D + +W
Sbjct: 525 IWRLPDLVHVVTLKGHK---------------RRIFSVEFSTVDQCVMTASGDKTVKIWA 569
Query: 569 AADGSLVHSLTGHTES----TYVLDVHPFNPRIAMSAGYDGKTIVWDI 612
+DGS + + GHT S +++ D F +S G DG +W++
Sbjct: 570 ISDGSCLKTFEGHTSSVLRASFITDGTQF-----VSCGADGLLKLWNV 612
Score = 66 (28.3 bits), Expect = 3.1e-08, Sum P(3) = 3.1e-08
Identities = 31/130 (23%), Positives = 53/130 (40%)
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLT--GHTESTYVLDVHPFNPRIA 598
+ +N + + ++ V D +W D LVH +T GH + ++ + +
Sbjct: 500 KDINSVAVARNDSLVCTGSEDRTASIWRLPD--LVHVVTLKGHKRRIFSVEFSTVD-QCV 556
Query: 599 MSAGYDGKTI-VWDIWEGIPIRIYE--------ISRFRDGASIILSDDVGQLYILNTGQG 649
M+A D KT+ +W I +G ++ +E S DG + G L + N
Sbjct: 557 MTASGD-KTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTS 615
Query: 650 ESQKDAKYDQ 659
E A YDQ
Sbjct: 616 ECI--ATYDQ 623
Score = 64 (27.6 bits), Expect = 4.9e-08, Sum P(3) = 4.9e-08
Identities = 48/223 (21%), Positives = 78/223 (34%)
Query: 395 IFCCAFNANG-TVFVTGSSDTLARVWNACKPNTDDSDQP-NHEI-DVLSGHENDVNYVQF 451
I AF + FV+GS D +VW+ ++DS++P N + V++ H+ D+N V
Sbjct: 449 ILAVAFAKKSFSFFVSGSGDRTLKVWSL-DGISEDSEEPINLKTRSVVAAHDKDINSV-- 505
Query: 452 SGCAVASRFSLADSSKEDSTPKFKNSWFCHDNIVTCSRDGSAIIWIPRSRRSHPKAARWT 511
AVA SL + ED T W D + + G RR + ++
Sbjct: 506 ---AVARNDSLVCTGSEDRTASI---WRLPDLVHVVTLKG-------HKRRIF--SVEFS 550
Query: 512 QAYHLKVXXXXXXXXXXXXXXXXXILPTPRGVNMIV----WSLDNRFVLAAIMDCRICVW 567
+ L T G V + D ++ D + +W
Sbjct: 551 TVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLW 610
Query: 568 NAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVW 610
N + + H + + L V IA G D +W
Sbjct: 611 NVNTSECIATYDQHEDKVWALAVGKKTEMIATGGG-DAVINLW 652
Score = 48 (22.0 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 10/50 (20%), Positives = 20/50 (40%)
Query: 394 QIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHE 443
+++ A + TG D + +W+ + + D E +L G E
Sbjct: 627 KVWALAVGKKTEMIATGGGDAVINLWHDSTASDKEDDFRKEEEAILRGQE 676
Score = 45 (20.9 bits), Expect = 3.8e-10, Sum P(3) = 3.8e-10
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 1078 IGEMMPLDANNGSGIHLDDDKEKESEVNGHVKPEKD 1113
+GEM +D + D+K+KE +V ++ + D
Sbjct: 805 LGEMSVIDPETVETEYPKDEKKKEKDVIAAMEQDTD 840
Score = 42 (19.8 bits), Expect = 5.3e-05, Sum P(4) = 5.3e-05
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 1482 ITVKGNIRAVEFCKVESLEYATASGSGDSCCKM 1514
+T+KG+ R + + +++ + SGD K+
Sbjct: 535 VTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKI 567
Score = 41 (19.5 bits), Expect = 9.7e-10, Sum P(3) = 9.7e-10
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 823 KRKKQKAEVEIMTSSGRRVKRRILDESEGN 852
KRK QK S G+ K+R++ E++G+
Sbjct: 850 KRKSQK-------SKGKSNKKRLIAEAQGS 872
Score = 41 (19.5 bits), Expect = 5.3e-05, Sum P(4) = 5.3e-05
Identities = 15/63 (23%), Positives = 28/63 (44%)
Query: 551 DNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNP-RIAMSAGYDGKTI- 608
+ +F+ A + V++ A S + L GH E LD + + + G KT+
Sbjct: 370 EEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVR 429
Query: 609 VWD 611
+W+
Sbjct: 430 LWN 432
Score = 39 (18.8 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 1620 LFDSDT-QWEQPRIDDDNRNKLLSAFAKLEQSANRVQDQYGVQKLKQVSQKT 1670
+ D +T + E P+ D + K A +EQ + ++ + +K K SQK+
Sbjct: 810 VIDPETVETEYPK---DEKKKEKDVIAAMEQDTDELKQETPSRKRK--SQKS 856
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 173 (66.0 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 38/125 (30%), Positives = 62/125 (49%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
+ ++ +RGH + + C FD + +I+GS DR +K+W+ T C+++ GH G +
Sbjct: 380 EELRTLRGHESGIRCLQFDDTK--LISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHF 437
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D +++W D S LRGHT V A+ +V+ S+SDD T
Sbjct: 438 DASILASGSV--DKTVKIWNFEDKSTFS-LRGHTDWVNAVRVDTSSRTVF---SASDDCT 491
Query: 354 CRIWD 358
R+WD
Sbjct: 492 VRLWD 496
Score = 145 (56.1 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 46/134 (34%), Positives = 58/134 (43%)
Query: 235 NIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
+IK +GH N V C F+ + + TGS D +KIW ET L + RGHE I
Sbjct: 341 SIKTFKGHTNGVMCLQFEDN--ILATGSYDTTIKIWDTETGEELRTLRGHESGIR--CLQ 396
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D I+VW G IS GH V + F S+ L S S D T
Sbjct: 397 FDDTKLISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHFD---ASI--LASGSVDKTV 451
Query: 355 RIWDAR-YSQFSPR 367
+IW+ S FS R
Sbjct: 452 KIWNFEDKSTFSLR 465
Score = 114 (45.2 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 31/103 (30%), Positives = 39/103 (37%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
I GHR V FD S + +GS D+ VKIW+ E S RGH +
Sbjct: 422 ISTYTGHRGGVIGLHFDAS--ILASGSVDKTVKIWNFEDKSTF-SLRGHTDWVNAVRVDT 478
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPR 338
DC +R+W L I GH V + PR
Sbjct: 479 SSRTVFSASDDCTVRLWDLDTKTCIRTFHGHVGQVQQVVPLPR 521
Score = 64 (27.6 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 553 RFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWD 611
R+++ + +D I +W G + + GH E + L RI +S D +WD
Sbjct: 580 RYMVTSALDSTIRLWETTTGRCLRTFFGHLEGVWALGADTL--RI-VSGAEDRMIKIWD 635
Score = 51 (23.0 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 547 VWSL--DNRFVLAAIMDCRICVWNAADGSLVHSLTGHT 582
VW+L D +++ D I +W+ G + TGH+
Sbjct: 612 VWALGADTLRIVSGAEDRMIKIWDPRTGKCERTFTGHS 649
Score = 50 (22.7 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGH 581
VN + +R V +A DC + +W+ + + + GH
Sbjct: 471 VNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCIRTFHGH 509
Score = 38 (18.4 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 399 AFNANGTVFVTGSSDTLARVWN 420
A A+ V+G+ D + ++W+
Sbjct: 614 ALGADTLRIVSGAEDRMIKIWD 635
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 154 (59.3 bits), Expect = 4.6e-10, Sum P(3) = 4.6e-10
Identities = 38/128 (29%), Positives = 60/128 (46%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYC--LASCRGHEGDITDXXX 293
I + GH VYC F +G + + DRL+ +W++ C A+ +GH G + +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 118
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLL-SSSDDG 352
D + VW G + L+GHT+ V + + R G QL+ + SDDG
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGP--QLVCTGSDDG 175
Query: 353 TCRIWDAR 360
T ++WD R
Sbjct: 176 TVKLWDIR 183
Score = 150 (57.9 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 50/188 (26%), Positives = 83/188 (44%)
Query: 234 QNIKRVRGHRNAVY-CAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
+ +KR++GH + V C R + V TGSDD VK+W + + + + + +
Sbjct: 143 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVT 201
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
D I+VW L +RGH +VT ++ S GS Y LLS++ D
Sbjct: 202 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSE-GS-Y-LLSNAMDN 258
Query: 353 TCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSS 412
T R+WD R F+P+ R + N+ + C+++ +G+ GS+
Sbjct: 259 TVRVWDVR--PFAPKERCVR----IFQGNVHNFEK------NLLRCSWSPDGSKIAAGSA 306
Query: 413 DTLARVWN 420
D VW+
Sbjct: 307 DRFVYVWD 314
Score = 108 (43.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 33/155 (21%), Positives = 64/155 (41%)
Query: 235 NIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
N ++GH AV ++ G + + S D+ V +W ET + +GH +
Sbjct: 102 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPA 161
Query: 295 XXXXXXX-XXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D +++W + I + +T V A+ F+ Q++S D
Sbjct: 162 RRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSD---QIISGGIDND 217
Query: 354 CRIWDARYSQFSPRIYIPRP-SDAVAGRNMAPSSS 387
++WD R ++ + Y R +D+V G +++ S
Sbjct: 218 IKVWDLRQNKLT---YTMRGHADSVTGLSLSSEGS 249
Score = 78 (32.5 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKT 607
WS D + A D + VW+ +++ L GH S + HP P I +SA D +
Sbjct: 294 WSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEP-IILSASSDKRL 352
Query: 608 IVWDI 612
+ +I
Sbjct: 353 YMGEI 357
Score = 62 (26.9 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 17/72 (23%), Positives = 33/72 (45%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWE 614
+++ +D I VW+ L +++ GH +S L + + +S D VWD+
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL-LSNAMDNTVRVWDVRP 267
Query: 615 GIP----IRIYE 622
P +RI++
Sbjct: 268 FAPKERCVRIFQ 279
Score = 40 (19.1 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 1238 DIKPNSLPEVLESDGTNRTSSDRGADGSQRLNAQIDST 1275
D++ N L + + T ++GS L+ +D+T
Sbjct: 222 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNT 259
Score = 38 (18.4 bits), Expect = 4.6e-10, Sum P(3) = 4.6e-10
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 409 TGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSG 453
TGS D ++W+ K + Q ++ VL+ ND + SG
Sbjct: 170 TGSDDGTVKLWDIRKKAAIQTFQNTYQ--VLAVTFNDTSDQIISG 212
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 154 (59.3 bits), Expect = 4.6e-10, Sum P(3) = 4.6e-10
Identities = 38/128 (29%), Positives = 60/128 (46%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYC--LASCRGHEGDITDXXX 293
I + GH VYC F +G + + DRL+ +W++ C A+ +GH G + +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 118
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLL-SSSDDG 352
D + VW G + L+GHT+ V + + R G QL+ + SDDG
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGP--QLVCTGSDDG 175
Query: 353 TCRIWDAR 360
T ++WD R
Sbjct: 176 TVKLWDIR 183
Score = 150 (57.9 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 51/188 (27%), Positives = 83/188 (44%)
Query: 234 QNIKRVRGHRNAVY-CAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
+ +KR++GH + V C R + V TGSDD VK+W + + + + + +
Sbjct: 143 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVT 201
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
D I+VW L +RGH +VT ++ S GS Y LLS++ D
Sbjct: 202 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSE-GS-Y-LLSNAMDN 258
Query: 353 TCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSS 412
T R+WD R F+P+ R G N+ + C+++ +G+ GS+
Sbjct: 259 TVRVWDVR--PFAPK---ERCVKIFQG-NVHNFEK------NLLRCSWSPDGSKIAAGSA 306
Query: 413 DTLARVWN 420
D VW+
Sbjct: 307 DRFVYVWD 314
Score = 108 (43.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 33/155 (21%), Positives = 64/155 (41%)
Query: 235 NIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
N ++GH AV ++ G + + S D+ V +W ET + +GH +
Sbjct: 102 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPA 161
Query: 295 XXXXXXX-XXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D +++W + I + +T V A+ F+ Q++S D
Sbjct: 162 RRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSD---QIISGGIDND 217
Query: 354 CRIWDARYSQFSPRIYIPRP-SDAVAGRNMAPSSS 387
++WD R ++ + Y R +D+V G +++ S
Sbjct: 218 IKVWDLRQNKLT---YTMRGHADSVTGLSLSSEGS 249
Score = 78 (32.5 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKT 607
WS D + A D + VW+ +++ L GH S + HP P I +SA D +
Sbjct: 294 WSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEP-IILSASSDKRL 352
Query: 608 IVWDI 612
+ +I
Sbjct: 353 YMGEI 357
Score = 61 (26.5 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDI 612
+++ +D I VW+ L +++ GH +S L + + +S D VWD+
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL-LSNAMDNTVRVWDV 265
Score = 40 (19.1 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 1238 DIKPNSLPEVLESDGTNRTSSDRGADGSQRLNAQIDST 1275
D++ N L + + T ++GS L+ +D+T
Sbjct: 222 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNT 259
Score = 38 (18.4 bits), Expect = 4.6e-10, Sum P(3) = 4.6e-10
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 409 TGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSG 453
TGS D ++W+ K + Q ++ VL+ ND + SG
Sbjct: 170 TGSDDGTVKLWDIRKKAAIQTFQNTYQ--VLAVTFNDTSDQIISG 212
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 154 (59.3 bits), Expect = 4.6e-10, Sum P(3) = 4.6e-10
Identities = 38/128 (29%), Positives = 60/128 (46%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYC--LASCRGHEGDITDXXX 293
I + GH VYC F +G + + DRL+ +W++ C A+ +GH G + +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 118
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLL-SSSDDG 352
D + VW G + L+GHT+ V + + R G QL+ + SDDG
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGP--QLVCTGSDDG 175
Query: 353 TCRIWDAR 360
T ++WD R
Sbjct: 176 TVKLWDIR 183
Score = 150 (57.9 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 51/188 (27%), Positives = 83/188 (44%)
Query: 234 QNIKRVRGHRNAVY-CAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
+ +KR++GH + V C R + V TGSDD VK+W + + + + + +
Sbjct: 143 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVT 201
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
D I+VW L +RGH +VT ++ S GS Y LLS++ D
Sbjct: 202 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSE-GS-Y-LLSNAMDN 258
Query: 353 TCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSS 412
T R+WD R F+P+ R G N+ + C+++ +G+ GS+
Sbjct: 259 TVRVWDVR--PFAPK---ERCVKIFQG-NVHNFEK------NLLRCSWSPDGSKIAAGSA 306
Query: 413 DTLARVWN 420
D VW+
Sbjct: 307 DRFVYVWD 314
Score = 108 (43.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 33/155 (21%), Positives = 64/155 (41%)
Query: 235 NIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
N ++GH AV ++ G + + S D+ V +W ET + +GH +
Sbjct: 102 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPA 161
Query: 295 XXXXXXX-XXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D +++W + I + +T V A+ F+ Q++S D
Sbjct: 162 RRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSD---QIISGGIDND 217
Query: 354 CRIWDARYSQFSPRIYIPRP-SDAVAGRNMAPSSS 387
++WD R ++ + Y R +D+V G +++ S
Sbjct: 218 IKVWDLRQNKLT---YTMRGHADSVTGLSLSSEGS 249
Score = 78 (32.5 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKT 607
WS D + A D + VW+ +++ L GH S + HP P I +SA D +
Sbjct: 294 WSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEP-IILSASSDKRL 352
Query: 608 IVWDI 612
+ +I
Sbjct: 353 YMGEI 357
Score = 61 (26.5 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDI 612
+++ +D I VW+ L +++ GH +S L + + +S D VWD+
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL-LSNAMDNTVRVWDV 265
Score = 40 (19.1 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 1238 DIKPNSLPEVLESDGTNRTSSDRGADGSQRLNAQIDST 1275
D++ N L + + T ++GS L+ +D+T
Sbjct: 222 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNT 259
Score = 38 (18.4 bits), Expect = 4.6e-10, Sum P(3) = 4.6e-10
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 409 TGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSG 453
TGS D ++W+ K + Q ++ VL+ ND + SG
Sbjct: 170 TGSDDGTVKLWDIRKKAAIQTFQNTYQ--VLAVTFNDTSDQIISG 212
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 165 (63.1 bits), Expect = 5.1e-10, Sum P(3) = 5.1e-10
Identities = 39/125 (31%), Positives = 60/125 (48%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
I+R+ GH + V FD R +ITGS D+ +++W+ T C+++ RGH +
Sbjct: 335 IRRLSGHSDGVKTLYFD--DRKLITGSLDKTIRVWNYITGECISTYRGHSDSVLSVDSYQ 392
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D ++VW + + LRGHT V + P+ S + S SDD T R
Sbjct: 393 KVIVSGSA--DKTVKVWHV-ESRTCYTLRGHTEWVNCVKLHPKSFSCF---SCSDDTTIR 446
Query: 356 IWDAR 360
+WD R
Sbjct: 447 MWDIR 451
Score = 107 (42.7 bits), Expect = 0.00058, Sum P(3) = 0.00058
Identities = 27/98 (27%), Positives = 42/98 (42%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
I RGH ++V D + +++GS D+ VK+W +E+ C + RGH +
Sbjct: 375 ISTYRGHSDSVLSV--DSYQKVIVSGSADKTVKVWHVESRTCY-TLRGHTEWVNCVKLHP 431
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAI 333
D IR+W + + V RGH V I
Sbjct: 432 KSFSCFSCSDDTTIRMWDIRTNSCLKVFRGHVGQVQKI 469
Score = 105 (42.0 bits), Expect = 0.00093, Sum P(3) = 0.00093
Identities = 34/124 (27%), Positives = 51/124 (41%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
I+ +GH + V F+ R + TGS D + IW + T + GH +
Sbjct: 295 IQEFKGHMDGVLTLQFNY--RLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVK--TLYF 350
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQ--LLSSSDDGT 353
D IRVW G IS RGH+ +V ++ YQ ++S S D T
Sbjct: 351 DDRKLITGSLDKTIRVWNYITGECISTYRGHSDSVLSV-------DSYQKVIVSGSADKT 403
Query: 354 CRIW 357
++W
Sbjct: 404 VKVW 407
Score = 80 (33.2 bits), Expect = 5.1e-10, Sum P(3) = 5.1e-10
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWE 614
+L+ +D I +W+ G + + GH E + D+ N RI +S +DG VWD+
Sbjct: 525 LLSCGLDNTIKLWDVKTGKCIRTQFGHVEGVW--DIAADNFRI-ISGSHDGSIKVWDLQS 581
Query: 615 G 615
G
Sbjct: 582 G 582
Score = 52 (23.4 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 547 VWSL--DNRFVLAAIMDCRICVWNAADGSLVHSLTG 580
VW + DN +++ D I VW+ G +H+ G
Sbjct: 555 VWDIAADNFRIISGSHDGSIKVWDLQSGKCMHTFNG 590
Score = 51 (23.0 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 16/58 (27%), Positives = 25/58 (43%)
Query: 1133 VPL--KNVKNLSGENNDVYSGDASCKEQQSGFSELNYYDESKCVNTTDEDTTPYPNHL 1188
+PL K+V+NL+ +N S G E + + T ++ PYP HL
Sbjct: 470 IPLTIKDVENLATDNTSDGSSPQDDPTMTDGADESDTPSNEQ--ETVLDENIPYPTHL 525
Score = 50 (22.7 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 571 DGSLVHSLTGHTESTYVLDVH-PFNPRIAMSAGYDGKTIVWDIWEGIPIR 619
DG+ S T E VLD + P+ P +S G D +WD+ G IR
Sbjct: 499 DGA-DESDTPSNEQETVLDENIPY-PTHLLSCGLDNTIKLWDVKTGKCIR 546
Score = 46 (21.3 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 20/77 (25%), Positives = 34/77 (44%)
Query: 427 DDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLAD-SSKEDSTPKF---KNSW-FCH 481
D+SD P++E + + EN C + + L D + + +F + W
Sbjct: 502 DESDTPSNEQETVLD-ENIPYPTHLLSCGLDNTIKLWDVKTGKCIRTQFGHVEGVWDIAA 560
Query: 482 DN--IVTCSRDGSAIIW 496
DN I++ S DGS +W
Sbjct: 561 DNFRIISGSHDGSIKVW 577
Score = 37 (18.1 bits), Expect = 5.1e-10, Sum P(3) = 5.1e-10
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 414 TLARVWNACKPNTDDSDQPNHEIDVLSG-HEND 445
T+ V N NT D P + + G E+D
Sbjct: 473 TIKDVENLATDNTSDGSSPQDDPTMTDGADESD 505
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 154 (59.3 bits), Expect = 5.6e-10, Sum P(3) = 5.6e-10
Identities = 38/128 (29%), Positives = 60/128 (46%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYC--LASCRGHEGDITDXXX 293
I + GH VYC F +G + + DRL+ +W++ C A+ +GH G + +
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 117
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLL-SSSDDG 352
D + VW G + L+GHT+ V + + R G QL+ + SDDG
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGP--QLVCTGSDDG 174
Query: 353 TCRIWDAR 360
T ++WD R
Sbjct: 175 TVKLWDIR 182
Score = 150 (57.9 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 51/188 (27%), Positives = 83/188 (44%)
Query: 234 QNIKRVRGHRNAVY-CAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
+ +KR++GH + V C R + V TGSDD VK+W + + + + + +
Sbjct: 142 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVT 200
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
D I+VW L +RGH +VT ++ S GS Y LLS++ D
Sbjct: 201 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSE-GS-Y-LLSNAMDN 257
Query: 353 TCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSS 412
T R+WD R F+P+ R G N+ + C+++ +G+ GS+
Sbjct: 258 TVRVWDVR--PFAPK---ERCVKIFQG-NVHNFEK------NLLRCSWSPDGSKIAAGSA 305
Query: 413 DTLARVWN 420
D VW+
Sbjct: 306 DRFVYVWD 313
Score = 108 (43.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 33/155 (21%), Positives = 64/155 (41%)
Query: 235 NIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
N ++GH AV ++ G + + S D+ V +W ET + +GH +
Sbjct: 101 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPA 160
Query: 295 XXXXXXX-XXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D +++W + I + +T V A+ F+ Q++S D
Sbjct: 161 RRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSD---QIISGGIDND 216
Query: 354 CRIWDARYSQFSPRIYIPRP-SDAVAGRNMAPSSS 387
++WD R ++ + Y R +D+V G +++ S
Sbjct: 217 IKVWDLRQNKLT---YTMRGHADSVTGLSLSSEGS 248
Score = 77 (32.2 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKT 607
WS D + A D + VW+ +++ L GH S + HP P I +SA D +
Sbjct: 293 WSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEP-IIISASSDKRL 351
Query: 608 IVWDI 612
+ +I
Sbjct: 352 YMGEI 356
Score = 61 (26.5 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDI 612
+++ +D I VW+ L +++ GH +S L + + +S D VWD+
Sbjct: 208 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL-LSNAMDNTVRVWDV 264
Score = 40 (19.1 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 1238 DIKPNSLPEVLESDGTNRTSSDRGADGSQRLNAQIDST 1275
D++ N L + + T ++GS L+ +D+T
Sbjct: 221 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNT 258
Score = 38 (18.4 bits), Expect = 5.6e-10, Sum P(3) = 5.6e-10
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 409 TGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSG 453
TGS D ++W+ K + Q ++ VL+ ND + SG
Sbjct: 169 TGSDDGTVKLWDIRKKAAIQTFQNTYQ--VLAVTFNDTSDQIISG 211
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 154 (59.3 bits), Expect = 5.7e-10, Sum P(3) = 5.7e-10
Identities = 38/128 (29%), Positives = 60/128 (46%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYC--LASCRGHEGDITDXXX 293
I + GH VYC F +G + + DRL+ +W++ C A+ +GH G + +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 118
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLL-SSSDDG 352
D + VW G + L+GHT+ V + + R G QL+ + SDDG
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGP--QLVCTGSDDG 175
Query: 353 TCRIWDAR 360
T ++WD R
Sbjct: 176 TVKLWDIR 183
Score = 149 (57.5 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 51/188 (27%), Positives = 83/188 (44%)
Query: 234 QNIKRVRGHRNAVY-CAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
+ +KR++GH + V C R + V TGSDD VK+W + + + + + +
Sbjct: 143 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVT 201
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
D I+VW L +RGH +VT ++ S GS Y LLS++ D
Sbjct: 202 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSE-GS-Y-LLSNAMDN 258
Query: 353 TCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSS 412
T R+WD R F+P+ R G N+ + C+++ +G+ GS+
Sbjct: 259 TVRVWDVR--PFAPK---ERCVKIFQG-NVHNFEK------NLLRCSWSPDGSKIAAGSA 306
Query: 413 DTLARVWN 420
D VW+
Sbjct: 307 DRFVYVWD 314
Score = 107 (42.7 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 32/155 (20%), Positives = 64/155 (41%)
Query: 235 NIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
N ++GH AV ++ G + + S D+ V +W ET + +GH +
Sbjct: 102 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPA 161
Query: 295 XXXXXXX-XXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D +++W + + + +T V A+ F+ Q++S D
Sbjct: 162 RRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSD---QIISGGIDND 217
Query: 354 CRIWDARYSQFSPRIYIPRP-SDAVAGRNMAPSSS 387
++WD R ++ + Y R +D+V G +++ S
Sbjct: 218 IKVWDLRQNKLT---YTMRGHADSVTGLSLSSEGS 249
Score = 77 (32.2 bits), Expect = 5.7e-10, Sum P(3) = 5.7e-10
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKT 607
WS D + A D + VW+ +++ L GH S + HP P I +SA D +
Sbjct: 294 WSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEP-IILSASSDKRL 352
Query: 608 IVWDI 612
+ +I
Sbjct: 353 YMGEI 357
Score = 61 (26.5 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDI 612
+++ +D I VW+ L +++ GH +S L + + +S D VWD+
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL-LSNAMDNTVRVWDV 265
Score = 40 (19.1 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 1238 DIKPNSLPEVLESDGTNRTSSDRGADGSQRLNAQIDST 1275
D++ N L + + T ++GS L+ +D+T
Sbjct: 222 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNT 259
Score = 38 (18.4 bits), Expect = 5.7e-10, Sum P(3) = 5.7e-10
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 409 TGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSG 453
TGS D ++W+ K + Q ++ VL+ ND + SG
Sbjct: 170 TGSDDGTVKLWDIRKKAAVQTFQNTYQ--VLAVTFNDTSDQIISG 212
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 170 (64.9 bits), Expect = 6.1e-10, Sum P(3) = 6.1e-10
Identities = 57/213 (26%), Positives = 88/213 (41%)
Query: 232 KMQNIKRV-RG-HRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEG--D 287
K Q +R R H V FD + + TG D +K+W + YC + +G G
Sbjct: 93 KQQQCRRSWRAVHSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVH 152
Query: 288 ITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLS 347
+ + DC IR+W L + VL H + VTA+AFSP G + L+S
Sbjct: 153 LVEFHPDISRLQLFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSP-DG--HTLVS 209
Query: 348 SSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRN-MAPSSSAGPQSHQIFCCAFNANGTV 406
S D C +WD + + I + + V + A S G +S + + G +
Sbjct: 210 SGRDKICSVWDLQEQKVKRTIPVYEAVEGVVLLSGSADYSEMGVKSDALHLVTAGSKGVL 269
Query: 407 FVTGSSDTLARVWNACKPN----TDDSDQPNHE 435
V SS + V+ P+ T+D D + E
Sbjct: 270 RVWDSSSSRC-VFTQTLPDASSHTEDEDAEDEE 301
Score = 149 (57.5 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 35/134 (26%), Positives = 56/134 (41%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
V M+ R H V + + + +GS DR K+W++ L CRGH +
Sbjct: 471 VMMMKARSTERAHEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVW 530
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D +R+W + D + GH A+V I F R G+ QL+SS
Sbjct: 531 SVQFSPVDQILGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSR-GT--QLVSSG 587
Query: 350 DDGTCRIWDARYSQ 363
DG ++W + ++
Sbjct: 588 SDGLVKLWTIKTNE 601
Score = 78 (32.5 bits), Expect = 6.1e-10, Sum P(3) = 6.1e-10
Identities = 48/216 (22%), Positives = 81/216 (37%)
Query: 404 GTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLA 463
G++F T + D RVW D S H + +GH N V + S + +F ++
Sbjct: 398 GSMFATCAKDKSVRVWRM-----DVSSGRVHCVAQGTGHSNAVGSIACS--RMKQQFVVS 450
Query: 464 DSSKEDSTPKFKNSWFCHDNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAY---HLKVXX 520
S +D T K W D T +G ++ + R+H K L
Sbjct: 451 GS--QDCTVKV---W---DLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASG 502
Query: 521 XXXXXXXXXXXXXXXILPTPRGVNMIVWSLD----NRFVLAAIMDCRICVWNAADGSLVH 576
+L RG VWS+ ++ + +A D + +W+ D S +
Sbjct: 503 SQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSCLK 562
Query: 577 SLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDI 612
+ GH S + ++ +S+G DG +W I
Sbjct: 563 TFEGHDASVLKIIFVSRGTQL-VSSGSDGLVKLWTI 597
Score = 72 (30.4 bits), Expect = 2.4e-09, Sum P(3) = 2.4e-09
Identities = 28/129 (21%), Positives = 54/129 (41%)
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
+ VN + S +++ + + D +W +D L+ GH + + P + +I S
Sbjct: 485 KDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVD-QILGS 543
Query: 601 AGYDGKTIVWDI--------WEGIPIRIYEISRFRDGASIILS--DDVGQLYILNTGQGE 650
A DG +W I +EG + +I G ++ S D + +L+ + T +
Sbjct: 544 ASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTNECV 603
Query: 651 SQKDAKYDQ 659
DA D+
Sbjct: 604 RTLDAHQDK 612
Score = 43 (20.2 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 14/58 (24%), Positives = 22/58 (37%)
Query: 561 DCRICVWNA-ADGSLVHSL---TGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWE 614
D + VW VH + TGH+ + + + +S D VWD+ E
Sbjct: 407 DKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPE 464
Score = 42 (19.8 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 480 CHDNI-VTCSRDGSAIIWIPRSRRS 503
C D + VT S D + +W + R++
Sbjct: 620 CRDELMVTGSADSTITVWTDKLRKT 644
Score = 40 (19.1 bits), Expect = 0.00055, Sum P(3) = 0.00054
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 406 VFVTGSSDTLARVW 419
+ VTGS+D+ VW
Sbjct: 624 LMVTGSADSTITVW 637
Score = 39 (18.8 bits), Expect = 6.1e-10, Sum P(3) = 6.1e-10
Identities = 18/89 (20%), Positives = 36/89 (40%)
Query: 698 AMIPYPEPYQTMYQQRRLGALGIEWRPSSLKLAVGPDFSLDQGYQLQPLADLDVMI-DPL 756
A++PY E + + ++ +++ +++ D S++ V I D
Sbjct: 765 ALVPYTERHMQRINRLLQASMFLDYMWQKMRITGAMD-SVNMQEDEDDDGVQSVFITDKQ 823
Query: 757 PEFIDVMDWEPENEVQSDDNDSEYNVAEE 785
P + + E ENE DSE + E+
Sbjct: 824 P--MQTTEEEEENEEMQCSGDSEQRLHED 850
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 180 (68.4 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 42/126 (33%), Positives = 63/126 (50%)
Query: 234 QNIKRV-RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
Q ++ V GH +Y F +GR++++GS DR ++W +ET C+ G +T
Sbjct: 392 QKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENG-VTAIA 450
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
D IIRVW + G + L GH +V +IAFSP S+ LLS S D
Sbjct: 451 ISPNDQFIAVGSLDQIIRVWSV-SGTLVERLEGHKESVYSIAFSP-DSSI--LLSGSLDK 506
Query: 353 TCRIWD 358
T ++W+
Sbjct: 507 TIKVWE 512
Score = 100 (40.3 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 537 LPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPR 596
L GV I S +++F+ +D I VW+ + G+LV L GH ES Y + P +
Sbjct: 440 LEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVS-GTLVERLEGHKESVYSIAFSP-DSS 497
Query: 597 IAMSAGYDGKTI-VWDI 612
I +S D KTI VW++
Sbjct: 498 ILLSGSLD-KTIKVWEL 513
Score = 86 (35.3 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 33/150 (22%), Positives = 57/150 (38%)
Query: 235 NIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGD------I 288
N+ H + V C F +G+Y+ TG + + ++ ++T L + D +
Sbjct: 305 NLVHTLEHPSVVCCVKFSNNGKYLATGCN-QAANVFDVQTGKKLFTLHEESPDPSRDLYV 363
Query: 289 TDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSS 348
D I++W L V GH + ++ FS G ++S
Sbjct: 364 RTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHN-GRF--IVSG 420
Query: 349 SDDGTCRIWDARYSQFSPRIYIPRPSDAVA 378
S D T R+WD Q ++ I A+A
Sbjct: 421 SGDRTARLWDVETGQCILKLEIENGVTAIA 450
Score = 53 (23.7 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 16/64 (25%), Positives = 27/64 (42%)
Query: 549 SLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI 608
S D+R+ L+ D + W+ G + GH S + P + A +G D +
Sbjct: 547 SPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSG-DLRAR 605
Query: 609 VWDI 612
+W I
Sbjct: 606 IWSI 609
>UNIPROTKB|Q9HAV0 [details] [associations]
symbol:GNB4 "Guanine nucleotide-binding protein subunit
beta-4" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006112 "energy reserve metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006112 GO:GO:0004871
GO:GO:0071377 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 EMBL:AF300648 EMBL:AK001890
EMBL:BC000873 IPI:IPI00012451 RefSeq:NP_067642.1 UniGene:Hs.173030
ProteinModelPortal:Q9HAV0 SMR:Q9HAV0 IntAct:Q9HAV0
MINT:MINT-1135986 STRING:Q9HAV0 PhosphoSite:Q9HAV0 DMDM:22256759
OGP:Q9HAV0 PeptideAtlas:Q9HAV0 PRIDE:Q9HAV0 DNASU:59345
Ensembl:ENST00000232564 Ensembl:ENST00000468623 GeneID:59345
KEGG:hsa:59345 UCSC:uc003fjv.4 CTD:59345 GeneCards:GC03M179113
HGNC:HGNC:20731 HPA:CAB018383 HPA:CAB018737 MIM:610863
neXtProt:NX_Q9HAV0 PharmGKB:PA134864200 InParanoid:Q9HAV0 KO:K04538
OMA:GACDATS PhylomeDB:Q9HAV0 GenomeRNAi:59345 NextBio:65246
ArrayExpress:Q9HAV0 Bgee:Q9HAV0 CleanEx:HS_GNB4
Genevestigator:Q9HAV0 GermOnline:ENSG00000114450 Uniprot:Q9HAV0
Length = 340
Score = 160 (61.4 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 37/128 (28%), Positives = 57/128 (44%)
Query: 237 KRVRGHRNAVYCAIF-DRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
+ + GH + C F D S ++T S D +W +ETA + GH GD+
Sbjct: 137 RELPGHTGYLSCCRFLDDS--QIVTSSGDTTCALWDIETAQQTTTFTGHSGDVMSLSLSP 194
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D ++W + DG+ GH + + A++F P G Y + SDD TCR
Sbjct: 195 DMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPN-G--YAFATGSDDATCR 251
Query: 356 IWDARYSQ 363
++D R Q
Sbjct: 252 LFDLRADQ 259
Score = 64 (27.6 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 17/70 (24%), Positives = 27/70 (38%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G+ + +S R +LA D VW+ G L GH L V +A +
Sbjct: 272 GITSVAFSKSGRLLLAGYDDFNCNVWDTLKGDRAGVLAGHDNRVSCLGVTDDGMAVA-TG 330
Query: 602 GYDGKTIVWD 611
+D +W+
Sbjct: 331 SWDSFLRIWN 340
Score = 56 (24.8 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 399 AFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNY--VQFSGCAV 456
AF+ +G + + G D VW+ K D+ VL+GH+N V+ V G AV
Sbjct: 277 AFSKSGRLLLAGYDDFNCNVWDTLK-----GDRAG----VLAGHDNRVSCLGVTDDGMAV 327
Query: 457 AS 458
A+
Sbjct: 328 AT 329
>WB|WBGene00001680 [details] [associations]
symbol:gpb-2 species:6239 "Caenorhabditis elegans"
[GO:0040007 "growth" evidence=IMP] [GO:0030163 "protein catabolic
process" evidence=IMP] [GO:0008277 "regulation of G-protein coupled
receptor protein signaling pathway" evidence=IGI] [GO:0046662
"regulation of oviposition" evidence=IMP] [GO:0040012 "regulation
of locomotion" evidence=IMP] [GO:0007631 "feeding behavior"
evidence=IMP] [GO:0007212 "dopamine receptor signaling pathway"
evidence=IMP] [GO:0032094 "response to food" evidence=IMP]
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=IGI;IMP] [GO:0043051 "regulation of pharyngeal
pumping" evidence=IMP] [GO:0043025 "neuronal cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0040007 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007212
GO:GO:0007631 GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0040012 GO:GO:0046662
GO:GO:0043051 GO:GO:0032094 GO:GO:0007213 GO:GO:0030163
GO:GO:0008277 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 InterPro:IPR016346 PIRSF:PIRSF002394
EMBL:AF291847 EMBL:Z71263 PIR:T22478 RefSeq:NP_492072.1
UniGene:Cel.18555 ProteinModelPortal:Q20636 SMR:Q20636
STRING:Q20636 PaxDb:Q20636 EnsemblMetazoa:F52A8.2.1
EnsemblMetazoa:F52A8.2.2 GeneID:172483 KEGG:cel:CELE_F52A8.2
UCSC:F52A8.2 CTD:172483 WormBase:F52A8.2 InParanoid:Q20636
KO:K04539 OMA:ATDGLHE NextBio:875701 Uniprot:Q20636
Length = 356
Score = 160 (61.4 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 37/130 (28%), Positives = 57/130 (43%)
Query: 233 MQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDI--TD 290
+Q ++V H + + C F RS ++TGS D IW +E+ + + GH GD+ D
Sbjct: 146 IQKKRQVATHTSYMSCCTFLRSDNLILTGSGDSTCAIWDVESGQLIQNFHGHTGDVFAID 205
Query: 291 XXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSD 350
D VW + G + GH A + + F P G + + SD
Sbjct: 206 VPKCDTGNTFISAGADKHSLVWDIRSGQCVQSFEGHEADINTVRFHPN-GDAFA--TGSD 262
Query: 351 DGTCRIWDAR 360
D TCR++D R
Sbjct: 263 DATCRLFDLR 272
Score = 65 (27.9 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 19/68 (27%), Positives = 29/68 (42%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN + +SL R + A D R+ VW++ + L GH L P + SA
Sbjct: 289 VNGVDFSLSGRILFAGYGDYRVGVWDSLKCARHSVLYGHENRISCLRTSPDGTAVC-SAS 347
Query: 603 YDGKTIVW 610
+D +W
Sbjct: 348 WDCTIRIW 355
Score = 43 (20.2 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 393 HQIFCCAFNANGTVFVTGSSDTLARVW 419
++I C + +GT + S D R+W
Sbjct: 329 NRISCLRTSPDGTAVCSASWDCTIRIW 355
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 137 (53.3 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 36/122 (29%), Positives = 54/122 (44%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH AV F G+ ++ D V+IW + T+ + +GH +
Sbjct: 138 GHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSPDSKKI 197
Query: 301 XXXXXDCIIRVWRLPDGLPI-SVLRGHTAAVTAIAFSP---RPGSVYQLLSSSDDGTCRI 356
+ IR+W G + S L+GHT +T +++ P P V +L SSS D T RI
Sbjct: 198 ATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCV-RLASSSKDSTIRI 256
Query: 357 WD 358
WD
Sbjct: 257 WD 258
Score = 132 (51.5 bits), Expect = 0.00011, P = 0.00011
Identities = 32/123 (26%), Positives = 52/123 (42%)
Query: 235 NIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
+I R+ GH+ + F GRY + S D+ +K+W ++ L + RGH G +
Sbjct: 386 SISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWS 445
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D +++W + L GH V + +SP G ++ S S D
Sbjct: 446 SDSRYLVSGSKDSTLKIWDIKTKKMEKELPGHADEVYTVDWSP-DGD--RVASGSKDRLL 502
Query: 355 RIW 357
RIW
Sbjct: 503 RIW 505
Score = 95 (38.5 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 18/70 (25%), Positives = 33/70 (47%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V + WS D+R++++ D + +W+ + L GH + Y +D P R+A S
Sbjct: 439 VYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKMEKELPGHADEVYTVDWSPDGDRVA-SGS 497
Query: 603 YDGKTIVWDI 612
D +W +
Sbjct: 498 KDRLLRIWTV 507
Score = 87 (35.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 31/126 (24%), Positives = 50/126 (39%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASC-RGHEGDITDXXXXXXX 297
++GH N V + + + T + ++IW +T L S +GH IT
Sbjct: 178 LKGHTNWVLQVAWSPDSKKIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFH 237
Query: 298 XX-----XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
D IR+W + L GHT +VT + + G +Y S S D
Sbjct: 238 LNPKCVRLASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWGGE-GLIY---SGSQDR 293
Query: 353 TCRIWD 358
T R+++
Sbjct: 294 TVRVFN 299
Score = 86 (35.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 20/81 (24%), Positives = 34/81 (41%)
Query: 277 CLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFS 336
C +S GH + + D +R+W + P L+GHT V +A+S
Sbjct: 132 CASSMSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWS 191
Query: 337 PRPGSVYQLLSSSDDGTCRIW 357
P ++ ++ +G RIW
Sbjct: 192 P---DSKKIATAGMEGDIRIW 209
Score = 84 (34.6 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 18/70 (25%), Positives = 33/70 (47%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
+N++ +S D R+ +A D I +W+ G + + GH + Y + + R +S
Sbjct: 397 INLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQV-CWSSDSRYLVSGS 455
Query: 603 YDGKTIVWDI 612
D +WDI
Sbjct: 456 KDSTLKIWDI 465
Score = 84 (34.6 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 31/119 (26%), Positives = 50/119 (42%)
Query: 260 TGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLP 319
+ S D ++IW E+ L S GH +T D +RV+ DG
Sbjct: 247 SSSKDSTIRIWDTESCKNLMSLSGHTMSVT-CLKWGGEGLIYSGSQDRTVRVFNTTDGRL 305
Query: 320 ISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVA 378
+ VL GH V +A + + Y L + S D T + +D + + R+ + R +D A
Sbjct: 306 VRVLDGHAHWVNTLALN----TDYVLRTGSYDHTGKEYDTL--EEAQRVALERYNDVKA 358
Score = 52 (23.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 20/86 (23%), Positives = 34/86 (39%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V + W + + + D + V+N DG LV L GH L ++ + +
Sbjct: 275 VTCLKWGGEG-LIYSGSQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALN--TDYVLRTGS 331
Query: 603 YDGKTIVWDIWEGIPIRIYEISRFRD 628
YD +D E R+ + R+ D
Sbjct: 332 YDHTGKEYDTLEEAQ-RV-ALERYND 355
Score = 50 (22.7 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 9/44 (20%), Positives = 23/44 (52%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDV 438
++ ++++ V+GS D+ ++W+ K + + P H +V
Sbjct: 439 VYQVCWSSDSRYLVSGSKDSTLKIWDI-KTKKMEKELPGHADEV 481
Score = 48 (22.0 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 26/117 (22%), Positives = 52/117 (44%)
Query: 561 DCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI-VWDIWEGIPIR 619
D I +W+ + SL+GHT S L + + +G +T+ V++ +G +R
Sbjct: 251 DSTIRIWDTESCKNLMSLSGHTMSVTCLK---WGGEGLIYSGSQDRTVRVFNTTDGRLVR 307
Query: 620 IYEISRFRDGASIILSDDVGQLYILNTGQGESQKDAKYDQFFLGDYRPLVQDTYGNV 676
+ + ++ L+ D Y+L TG + +YD L + + + + Y +V
Sbjct: 308 VLD-GHAHWVNTLALNTD----YVLRTGSYD-HTGKEYDT--LEEAQRVALERYNDV 356
Score = 45 (20.9 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 394 QIFCCAFNANGTVFVTGSSDTLARVW 419
+++ ++ +G +GS D L R+W
Sbjct: 480 EVYTVDWSPDGDRVASGSKDRLLRIW 505
Score = 45 (20.9 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 17/52 (32%), Positives = 23/52 (44%)
Query: 925 YIESEESGRSLL---NEQRKHSKGKGISLDDSEDVTKLDTPESHVNAGIRRL 973
Y EE+ R L N+ + SKG I + S+D T + S I RL
Sbjct: 339 YDTLEEAQRVALERYNDVKAKSKGMEILISGSDDFTVIMWNPSVTKTSISRL 390
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 138 (53.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 50/190 (26%), Positives = 83/190 (43%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITG-SDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
Q I++ +GH V + G ++T SDD +K+W + C+ + + +T
Sbjct: 126 QKIRKHKGHAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRSKDCIKTIE-EKYPLTAVA 184
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
D I++W L + VL+GH +T++A S + GS LLS+S D
Sbjct: 185 IAQQGTQVFIGGIDGAIKIWDLRNNHCSHVLKGHKDIITSLAIS-KDGS--SLLSNSMDN 241
Query: 353 TCRIWDAR-YSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGS 411
T RI+D + ++ ++ I A+ G Q H + A++ N GS
Sbjct: 242 TVRIFDVKPFASAQRQLQIFE--GAIHG-----------QEHNLLGVAWSRNSRFVGAGS 288
Query: 412 SDTLARVWNA 421
SD VW+A
Sbjct: 289 SDKNVYVWSA 298
Score = 136 (52.9 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 49/177 (27%), Positives = 73/177 (41%)
Query: 208 TRHHRAPSIRAACYAIAKPSTMVQKMQ--NIKRVR--GHRNAVYCAIFDRSGRYVITGSD 263
T H IR ++ +++Q+ N+ ++ GH V A FD SG Y +G
Sbjct: 11 TNGHLVKRIRIQDSSLITEGSVLQRTSDLNVPNLQMFGHTAEVLVARFDPSGSYFASGGM 70
Query: 264 DRLVKIWSM-ETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISV 322
DR + +W++ G +G ITD D + W G I
Sbjct: 71 DRQILLWNVFGDVKNYGVLNGCKGAITDLQWSRDSRVVYCSSSDTHLMSWDAVSGQKIRK 130
Query: 323 LRGHTAAVTAIAFSPRPGSVYQLLSS-SDDGTCRIWDARYSQFSPRIYIPRPSDAVA 378
+GH V A+ + GS +LL+S SDD T ++WD+R I P AVA
Sbjct: 131 HKGHAGVVNALDVL-KVGS--ELLTSVSDDCTMKVWDSRSKDCIKTIEEKYPLTAVA 184
Score = 90 (36.7 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 24/63 (38%), Positives = 33/63 (52%)
Query: 546 IVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDG 605
+ WS ++RFV A D + VW+A G L + L GH S +D HP I +S D
Sbjct: 275 VAWSRNSRFVGAGSSDKNVYVWSAT-GDLRYVLPGHEGSVNHVDFHPHQD-IILSCSSD- 331
Query: 606 KTI 608
+TI
Sbjct: 332 RTI 334
Score = 42 (19.8 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 18/76 (23%), Positives = 27/76 (35%)
Query: 1238 DIKPNSLPEVLESDGTNRTSSDRGADGSQRLNAQIDSTSE-HD--PLGSHSHSHDPLGSH 1294
D++ N VL+ TS DGS L+ +D+T D P S
Sbjct: 205 DLRNNHCSHVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGA 264
Query: 1295 SHSHSRKMFNVVYRRS 1310
H + V + R+
Sbjct: 265 IHGQEHNLLGVAWSRN 280
Score = 40 (19.1 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 11/53 (20%), Positives = 22/53 (41%)
Query: 560 MDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDI 612
+D I +W+ + H L GH + L + + +S D ++D+
Sbjct: 197 IDGAIKIWDLRNNHCSHVLKGHKDIITSLAISKDGSSL-LSNSMDNTVRIFDV 248
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 157 (60.3 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 36/127 (28%), Positives = 53/127 (41%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ + GH + C F +IT S D +W +ET GH GD+
Sbjct: 137 RELPGHTGYLSCCRF-LDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPD 195
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D I++W + D + GH + + A+AF P G Y + SDD TCR+
Sbjct: 196 GRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPN-G--YAFTTGSDDATCRL 252
Query: 357 WDARYSQ 363
+D R Q
Sbjct: 253 FDLRADQ 259
Score = 123 (48.4 bits), Expect = 0.00052, P = 0.00052
Identities = 34/122 (27%), Positives = 52/122 (42%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH V GR ++G+ D +K+W + + C + GHE DI
Sbjct: 182 GHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAF 241
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHT---AAVTAIAFSPRPGSVYQLLSSSDDGTCRIW 357
D R++ L + ++ H +T++AFS R G + LL+ DD C IW
Sbjct: 242 TTGSDDATCRLFDLRADQEL-LMYSHDNIICGITSVAFS-RSGRL--LLAGYDDFNCNIW 297
Query: 358 DA 359
DA
Sbjct: 298 DA 299
Score = 67 (28.6 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 17/70 (24%), Positives = 28/70 (40%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G+ + +S R +LA D +W+A G L GH L V +A +
Sbjct: 272 GITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVA-TG 330
Query: 602 GYDGKTIVWD 611
+D +W+
Sbjct: 331 SWDSFLKIWN 340
Score = 59 (25.8 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 399 AFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNY--VQFSGCAV 456
AF+ +G + + G D +W+A K D+ VL+GH+N V+ V G AV
Sbjct: 277 AFSRSGRLLLAGYDDFNCNIWDAMK-----GDRAG----VLAGHDNRVSCLGVTDDGMAV 327
Query: 457 AS 458
A+
Sbjct: 328 AT 329
Score = 55 (24.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 355 RIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDT 414
R+ A Y F+ I+ DA+ G AG +++ C +G TGS D+
Sbjct: 283 RLLLAGYDDFNCNIW-----DAMKGDRAGVL--AG-HDNRVSCLGVTDDGMAVATGSWDS 334
Query: 415 LARVWN 420
++WN
Sbjct: 335 FLKIWN 340
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 157 (60.3 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 36/127 (28%), Positives = 53/127 (41%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ + GH + C F +IT S D +W +ET GH GD+
Sbjct: 137 RELPGHTGYLSCCRF-LDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPD 195
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D I++W + D + GH + + A+AF P G Y + SDD TCR+
Sbjct: 196 GRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPN-G--YAFTTGSDDATCRL 252
Query: 357 WDARYSQ 363
+D R Q
Sbjct: 253 FDLRADQ 259
Score = 123 (48.4 bits), Expect = 0.00052, P = 0.00052
Identities = 34/122 (27%), Positives = 52/122 (42%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH V GR ++G+ D +K+W + + C + GHE DI
Sbjct: 182 GHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAF 241
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHT---AAVTAIAFSPRPGSVYQLLSSSDDGTCRIW 357
D R++ L + ++ H +T++AFS R G + LL+ DD C IW
Sbjct: 242 TTGSDDATCRLFDLRADQEL-LMYSHDNIICGITSVAFS-RSGRL--LLAGYDDFNCNIW 297
Query: 358 DA 359
DA
Sbjct: 298 DA 299
Score = 67 (28.6 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 17/70 (24%), Positives = 28/70 (40%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G+ + +S R +LA D +W+A G L GH L V +A +
Sbjct: 272 GITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVA-TG 330
Query: 602 GYDGKTIVWD 611
+D +W+
Sbjct: 331 SWDSFLKIWN 340
Score = 59 (25.8 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 399 AFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNY--VQFSGCAV 456
AF+ +G + + G D +W+A K D+ VL+GH+N V+ V G AV
Sbjct: 277 AFSRSGRLLLAGYDDFNCNIWDAMK-----GDRAG----VLAGHDNRVSCLGVTDDGMAV 327
Query: 457 AS 458
A+
Sbjct: 328 AT 329
Score = 55 (24.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 355 RIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDT 414
R+ A Y F+ I+ DA+ G AG +++ C +G TGS D+
Sbjct: 283 RLLLAGYDDFNCNIW-----DAMKGDRAGVL--AG-HDNRVSCLGVTDDGMAVATGSWDS 334
Query: 415 LARVWN 420
++WN
Sbjct: 335 FLKIWN 340
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 157 (60.3 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 36/127 (28%), Positives = 53/127 (41%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ + GH + C F +IT S D +W +ET GH GD+
Sbjct: 137 RELPGHTGYLSCCRF-LDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPD 195
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D I++W + D + GH + + A+AF P G Y + SDD TCR+
Sbjct: 196 GRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPN-G--YAFTTGSDDATCRL 252
Query: 357 WDARYSQ 363
+D R Q
Sbjct: 253 FDLRADQ 259
Score = 123 (48.4 bits), Expect = 0.00052, P = 0.00052
Identities = 34/122 (27%), Positives = 52/122 (42%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH V GR ++G+ D +K+W + + C + GHE DI
Sbjct: 182 GHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAF 241
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHT---AAVTAIAFSPRPGSVYQLLSSSDDGTCRIW 357
D R++ L + ++ H +T++AFS R G + LL+ DD C IW
Sbjct: 242 TTGSDDATCRLFDLRADQEL-LMYSHDNIICGITSVAFS-RSGRL--LLAGYDDFNCNIW 297
Query: 358 DA 359
DA
Sbjct: 298 DA 299
Score = 67 (28.6 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 17/70 (24%), Positives = 28/70 (40%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G+ + +S R +LA D +W+A G L GH L V +A +
Sbjct: 272 GITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVA-TG 330
Query: 602 GYDGKTIVWD 611
+D +W+
Sbjct: 331 SWDSFLKIWN 340
Score = 59 (25.8 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 399 AFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNY--VQFSGCAV 456
AF+ +G + + G D +W+A K D+ VL+GH+N V+ V G AV
Sbjct: 277 AFSRSGRLLLAGYDDFNCNIWDAMK-----GDRAG----VLAGHDNRVSCLGVTDDGMAV 327
Query: 457 AS 458
A+
Sbjct: 328 AT 329
Score = 55 (24.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 355 RIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDT 414
R+ A Y F+ I+ DA+ G AG +++ C +G TGS D+
Sbjct: 283 RLLLAGYDDFNCNIW-----DAMKGDRAGVL--AG-HDNRVSCLGVTDDGMAVATGSWDS 334
Query: 415 LARVWN 420
++WN
Sbjct: 335 FLKIWN 340
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 157 (60.3 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 36/127 (28%), Positives = 53/127 (41%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ + GH + C F +IT S D +W +ET GH GD+
Sbjct: 137 RELPGHTGYLSCCRF-LDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPD 195
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D I++W + D + GH + + A+AF P G Y + SDD TCR+
Sbjct: 196 GRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPN-G--YAFTTGSDDATCRL 252
Query: 357 WDARYSQ 363
+D R Q
Sbjct: 253 FDLRADQ 259
Score = 123 (48.4 bits), Expect = 0.00052, P = 0.00052
Identities = 34/122 (27%), Positives = 52/122 (42%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH V GR ++G+ D +K+W + + C + GHE DI
Sbjct: 182 GHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAF 241
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHT---AAVTAIAFSPRPGSVYQLLSSSDDGTCRIW 357
D R++ L + ++ H +T++AFS R G + LL+ DD C IW
Sbjct: 242 TTGSDDATCRLFDLRADQEL-LMYSHDNIICGITSVAFS-RSGRL--LLAGYDDFNCNIW 297
Query: 358 DA 359
DA
Sbjct: 298 DA 299
Score = 67 (28.6 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 17/70 (24%), Positives = 28/70 (40%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G+ + +S R +LA D +W+A G L GH L V +A +
Sbjct: 272 GITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVA-TG 330
Query: 602 GYDGKTIVWD 611
+D +W+
Sbjct: 331 SWDSFLKIWN 340
Score = 59 (25.8 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 399 AFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNY--VQFSGCAV 456
AF+ +G + + G D +W+A K D+ VL+GH+N V+ V G AV
Sbjct: 277 AFSRSGRLLLAGYDDFNCNIWDAMK-----GDRAG----VLAGHDNRVSCLGVTDDGMAV 327
Query: 457 AS 458
A+
Sbjct: 328 AT 329
Score = 55 (24.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 355 RIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDT 414
R+ A Y F+ I+ DA+ G AG +++ C +G TGS D+
Sbjct: 283 RLLLAGYDDFNCNIW-----DAMKGDRAGVL--AG-HDNRVSCLGVTDDGMAVATGSWDS 334
Query: 415 LARVWN 420
++WN
Sbjct: 335 FLKIWN 340
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 157 (60.3 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 36/127 (28%), Positives = 53/127 (41%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ + GH + C F +IT S D +W +ET GH GD+
Sbjct: 137 RELPGHTGYLSCCRF-LDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPD 195
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D I++W + D + GH + + A+AF P G Y + SDD TCR+
Sbjct: 196 GRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPN-G--YAFTTGSDDATCRL 252
Query: 357 WDARYSQ 363
+D R Q
Sbjct: 253 FDLRADQ 259
Score = 123 (48.4 bits), Expect = 0.00052, P = 0.00052
Identities = 34/122 (27%), Positives = 52/122 (42%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH V GR ++G+ D +K+W + + C + GHE DI
Sbjct: 182 GHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAF 241
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHT---AAVTAIAFSPRPGSVYQLLSSSDDGTCRIW 357
D R++ L + ++ H +T++AFS R G + LL+ DD C IW
Sbjct: 242 TTGSDDATCRLFDLRADQEL-LMYSHDNIICGITSVAFS-RSGRL--LLAGYDDFNCNIW 297
Query: 358 DA 359
DA
Sbjct: 298 DA 299
Score = 67 (28.6 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 17/70 (24%), Positives = 28/70 (40%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G+ + +S R +LA D +W+A G L GH L V +A +
Sbjct: 272 GITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVA-TG 330
Query: 602 GYDGKTIVWD 611
+D +W+
Sbjct: 331 SWDSFLKIWN 340
Score = 59 (25.8 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 399 AFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNY--VQFSGCAV 456
AF+ +G + + G D +W+A K D+ VL+GH+N V+ V G AV
Sbjct: 277 AFSRSGRLLLAGYDDFNCNIWDAMK-----GDRAG----VLAGHDNRVSCLGVTDDGMAV 327
Query: 457 AS 458
A+
Sbjct: 328 AT 329
Score = 55 (24.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 355 RIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDT 414
R+ A Y F+ I+ DA+ G AG +++ C +G TGS D+
Sbjct: 283 RLLLAGYDDFNCNIW-----DAMKGDRAGVL--AG-HDNRVSCLGVTDDGMAVATGSWDS 334
Query: 415 LARVWN 420
++WN
Sbjct: 335 FLKIWN 340
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 202 (76.2 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 90/386 (23%), Positives = 147/386 (38%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+ H V +F G+ +++GS D VKIW T L + GH G +
Sbjct: 746 LENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGK 805
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D I +W G + GH ++ ++AF+P G +L S+SDD T +IWD
Sbjct: 806 LLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAP-DGK--ELASASDDSTIKIWD 862
Query: 359 ARYSQFSPRIYIPRPS-DAVA----GRNMAPSS--SA----GPQSHQIFCCAFNANGTVF 407
+ + S +VA G+ +A SS S P + ++ +G V
Sbjct: 863 LATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVK 922
Query: 408 VTGSSDTLARVWNACKPNTDDSDQP--NHEIDVLSGHENDVNYVQFSGCAVASRFSLADS 465
S ++ + + NT P + L GH V V FS LA S
Sbjct: 923 SVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFS----PDGKQLASS 978
Query: 466 SKEDSTPKFKNSWFCHDNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVXXXXXXX 525
S D+T K NS D +WI R+ P
Sbjct: 979 SS-DTTIKLWNSTTGELQQTFKGHD----LWI-RAVAFSPDGKHLVSGSD---DNTIKLW 1029
Query: 526 XXXXXXXXXXILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTEST 585
+ R V+ + +S D++ + ++ +D I +W++A G L +L GH++
Sbjct: 1030 DLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGV 1089
Query: 586 YVLDVHPFNPRIAMSAGYDGKTIVWD 611
+ P + ++ S YDG +W+
Sbjct: 1090 RSVTFSP-DGKLLASNSYDGTIKLWN 1114
Score = 141 (54.7 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 34/123 (27%), Positives = 53/123 (43%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
++ + GH V F G+ + +GS D + +W T L + GH I
Sbjct: 785 LQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAP 844
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D I++W L G L H+ +V ++AFSP G + L SSS D T +
Sbjct: 845 DGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSP-DGKL--LASSSLDSTIK 901
Query: 356 IWD 358
+W+
Sbjct: 902 VWN 904
Score = 135 (52.6 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 34/124 (27%), Positives = 55/124 (44%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
++ + GH +V F G+ + + S D +K+W+ T + +GH+ I
Sbjct: 953 LQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSP 1012
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D I++W L L H+ +V A+AFSP QL SSS D T +
Sbjct: 1013 DGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDK---QLASSSLDSTIK 1069
Query: 356 IWDA 359
+WD+
Sbjct: 1070 LWDS 1073
Score = 129 (50.5 bits), Expect = 0.00039, Sum P(4) = 0.00039
Identities = 30/123 (24%), Positives = 52/123 (42%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
++ GH ++++ F G+ + + SDD +KIW + T + H +
Sbjct: 827 LQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSP 886
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D I+VW G L G + V ++AFSP G +L S S+ T +
Sbjct: 887 DGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSP-DGK--KLASGSEKNTVK 943
Query: 356 IWD 358
+W+
Sbjct: 944 LWN 946
Score = 101 (40.6 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 29/111 (26%), Positives = 57/111 (51%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V+ + +S D + + + D I +W++A G L+ +L GH++ + P + ++ S
Sbjct: 1131 VDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSP-DGKLLASGS 1189
Query: 603 YDGKTIVWDIWEGIPIRIYEISRFRDGASIILSDDVGQLYILNTGQGESQK 653
YD +WD G ++I+E + S+ S D G+L + ++ GE+ K
Sbjct: 1190 YDQTAKLWDPATGELLQIFE-GHSKWVESVAFSPD-GKL-LASSSYGETIK 1237
Score = 85 (35.0 bits), Expect = 5.2e-07, Sum P(3) = 5.2e-07
Identities = 28/101 (27%), Positives = 47/101 (46%)
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
+GV + +S D + + + D I +WN G L +LTG ++ + P ++A S
Sbjct: 1087 QGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLA-S 1145
Query: 601 AGYDGKTIVWDIWEGIPIRIYEISRFRDGASIILSDDVGQL 641
YD +WD G ++ E R S++ S D G+L
Sbjct: 1146 GYYDSTIKLWDSATGELLQTLEGHSDRI-QSVVFSPD-GKL 1184
Score = 59 (25.8 bits), Expect = 2.6e-05, Sum P(4) = 2.6e-05
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V + +S D + + ++ I +W+ G L+ +L ES + P R+A
Sbjct: 1215 VESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDI 1274
Query: 603 YDGKTIVWD 611
+D K +WD
Sbjct: 1275 FDTK--IWD 1281
Score = 58 (25.5 bits), Expect = 3.2e-05, Sum P(4) = 3.2e-05
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 546 IVWSLD-NRFVLAAIMDCRICVWNAADGSLVHSLTGHTE 583
+ +S D NR I D +I W+ A G L+ +L GH++
Sbjct: 1260 VAFSPDGNRLASVDIFDTKI--WDPATGELLQALKGHSK 1296
Score = 55 (24.4 bits), Expect = 2.6e-05, Sum P(4) = 2.6e-05
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 392 SHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQF 451
S +I F+ +G + +GS D A++W+ P T + + + GH V V F
Sbjct: 1170 SDRIQSVVFSPDGKLLASGSYDQTAKLWD---PATGEL------LQIFEGHSKWVESVAF 1220
Query: 452 S 452
S
Sbjct: 1221 S 1221
Score = 42 (19.8 bits), Expect = 0.00045, Sum P(4) = 0.00045
Identities = 13/54 (24%), Positives = 25/54 (46%)
Query: 399 AFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS 452
AF+ +G +G D+ ++W++ T + + L GH + + V FS
Sbjct: 1135 AFSPDGKQLASGYYDSTIKLWDSA---TGEL------LQTLEGHSDRIQSVVFS 1179
Score = 39 (18.8 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 24 SKVHENAQLAGSDTSQPAELD 44
SK+ +N + DT Q +E+D
Sbjct: 580 SKLKKNICMLSDDTLQRSEID 600
Score = 37 (18.1 bits), Expect = 0.00016, Sum P(4) = 0.00016
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 2 ALRKYIPSADAPSGTMKPLSFS 23
A + + + D SGT++ L+FS
Sbjct: 780 ATGELLQTLDGHSGTVESLAFS 801
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 151 (58.2 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 38/128 (29%), Positives = 59/128 (46%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYC--LASCRGHEGDITDXXX 293
I + GH VYC F G + + DRL+ +W++ C A+ +GH G + +
Sbjct: 86 IMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 144
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLL-SSSDDG 352
D + VW G + L+GHT+ V + + R G QL+ + SDDG
Sbjct: 145 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGP--QLVCTGSDDG 201
Query: 353 TCRIWDAR 360
T ++WD R
Sbjct: 202 TVKLWDIR 209
Score = 148 (57.2 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 52/188 (27%), Positives = 83/188 (44%)
Query: 234 QNIKRVRGHRNAVY-CAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
+ +KR++GH + V C R + V TGSDD VK+W + + + + + +
Sbjct: 169 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVT 227
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
D I+VW L +RGH +VT ++ S GS Y LLS++ D
Sbjct: 228 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSE-GS-Y-LLSNAMDN 284
Query: 353 TCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSS 412
T RIWD R F+P+ R G N+ + C+++ +G+ GS+
Sbjct: 285 TVRIWDVR--PFAPK---ERCVKIFQG-NVHNFEK------NLLRCSWSPDGSKIAGGSA 332
Query: 413 DTLARVWN 420
D VW+
Sbjct: 333 DRFVYVWD 340
Score = 107 (42.7 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 32/155 (20%), Positives = 64/155 (41%)
Query: 235 NIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
N ++GH AV ++ G + + S D+ V +W ET + +GH +
Sbjct: 128 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPA 187
Query: 295 XXXXXXX-XXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D +++W + + + +T V A+ F+ Q++S D
Sbjct: 188 RRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSD---QIISGGIDND 243
Query: 354 CRIWDARYSQFSPRIYIPRP-SDAVAGRNMAPSSS 387
++WD R ++ + Y R +D+V G +++ S
Sbjct: 244 IKVWDLRQNKLT---YTMRGHADSVTGLSLSSEGS 275
Score = 78 (32.5 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 19/65 (29%), Positives = 29/65 (44%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKT 607
WS D + D + VW+ +++ L GH S L HP P I +SA D +
Sbjct: 320 WSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEP-IILSASSDKRL 378
Query: 608 IVWDI 612
+ +I
Sbjct: 379 YMGEI 383
Score = 60 (26.2 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 13/58 (22%), Positives = 27/58 (46%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDI 612
+++ +D I VW+ L +++ GH +S L + + +S D +WD+
Sbjct: 235 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL-LSNAMDNTVRIWDV 291
Score = 40 (19.1 bits), Expect = 9.8e-06, Sum P(3) = 9.8e-06
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 1238 DIKPNSLPEVLESDGTNRTSSDRGADGSQRLNAQIDST 1275
D++ N L + + T ++GS L+ +D+T
Sbjct: 248 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNT 285
Score = 38 (18.4 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 409 TGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSG 453
TGS D ++W+ K + Q ++ VL+ ND + SG
Sbjct: 196 TGSDDGTVKLWDIRKKAAVQTFQNTYQ--VLAVTFNDTSDQIISG 238
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 155 (59.6 bits), Expect = 3.6e-08, Sum P(4) = 3.6e-08
Identities = 34/123 (27%), Positives = 55/123 (44%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ ++GH ++V +F R + +GS+DR V+IW T + HE +
Sbjct: 341 RMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHD 400
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
+++W G +VL GH V +++FSP L S+SDD T +I
Sbjct: 401 SRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSP---DSRLLASASDDRTVKI 457
Query: 357 WDA 359
W A
Sbjct: 458 WHA 460
Score = 153 (58.9 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 34/123 (27%), Positives = 52/123 (42%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ + GH + V +F R + + SDD VKIW T + H+ +
Sbjct: 467 RTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHD 526
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D +++W G + L GH V +++FSP L S+SDDGT +I
Sbjct: 527 SRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSP---DSRLLASASDDGTVKI 583
Query: 357 WDA 359
W A
Sbjct: 584 WYA 586
Score = 147 (56.8 bits), Expect = 1.0e-09, Sum P(4) = 1.0e-09
Identities = 36/133 (27%), Positives = 52/133 (39%)
Query: 228 TMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGD 287
T +QN + GH V +F R + + SDD VKIW T +GH
Sbjct: 292 TATSFLQNT--LEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDS 349
Query: 288 ITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLS 347
+ D +R+W GL H +V A++F+ +L S
Sbjct: 350 VRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAH---DSRRLAS 406
Query: 348 SSDDGTCRIWDAR 360
+SD G +IWD R
Sbjct: 407 ASDGGNVKIWDTR 419
Score = 130 (50.8 bits), Expect = 5.3e-08, Sum P(4) = 5.3e-08
Identities = 31/119 (26%), Positives = 49/119 (41%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXX 299
+GH AV F R + + S D VKIW T++ + GH +
Sbjct: 260 KGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRL 319
Query: 300 XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D +++W G +L+GH +V ++ FS + S S+D T RIW+
Sbjct: 320 LASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLI---ASGSNDRTVRIWE 375
Score = 129 (50.5 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 36/132 (27%), Positives = 54/132 (40%)
Query: 228 TMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGD 287
T +QN+ + GH + V F R + + SDDR VKIW T + GH
Sbjct: 418 TRTGSLQNV--LEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDW 475
Query: 288 ITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPI-SVLRGHTAAVTAIAFSPRPGSVYQLL 346
+ D +++W +P+ + L H V ++ FS L
Sbjct: 476 VRSVVFSHDSRLIASASDDMTVKIWDTAT-VPLQNNLESHDNWVRSVVFSH---DSRLLA 531
Query: 347 SSSDDGTCRIWD 358
S+SDD T +IWD
Sbjct: 532 SASDDMTVKIWD 543
Score = 117 (46.2 bits), Expect = 0.00021, Sum P(4) = 0.00021
Identities = 30/117 (25%), Positives = 44/117 (37%)
Query: 242 HRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXX 301
H ++V F R + + SD VKIW T GH+ +
Sbjct: 388 HEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLA 447
Query: 302 XXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D +++W G L GH V ++ FS + S+SDD T +IWD
Sbjct: 448 SASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLI---ASASDDMTVKIWD 501
Score = 105 (42.0 bits), Expect = 1.0e-09, Sum P(4) = 1.0e-09
Identities = 45/174 (25%), Positives = 72/174 (41%)
Query: 437 DVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTPKFKNSWFCHDNIVTCSRDGSAIIW 496
+VL GH++ VN V FS SR LA +S +D T K W + + +G W
Sbjct: 425 NVLEGHDDCVNSVSFSP---DSRL-LASAS-DDRTVKI---WHAATGSLQRTLEGHND-W 475
Query: 497 IPRSRRSHPKAARWTQAYHLKVXXXXXXXXXXXXXXXXXILPTPRGVNMIVWSLDNRFVL 556
+ SH + + + V V +V+S D+R +
Sbjct: 476 VRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESH----DNWVRSVVFSHDSRLLA 531
Query: 557 AAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVW 610
+A D + +W+ A GSL ++L GH + + P + R+ SA DG +W
Sbjct: 532 SASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSP-DSRLLASASDDGTVKIW 584
Score = 97 (39.2 bits), Expect = 9.6e-05, Sum P(4) = 9.6e-05
Identities = 30/141 (21%), Positives = 60/141 (42%)
Query: 223 IAKPSTMVQKMQNIKR-VRGHRNAV-YCAIFDRSGRYV---ITGSDDRLVKIWSMETAYC 277
I + ++ + MQ ++R +R + + + + S R+ I+G +++++ +
Sbjct: 196 IQETASALSSMQRLERFIRKRSSDIDLLDVVEDSYRFALWNISGIKCAPLQVYASALLFS 255
Query: 278 LASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSP 337
A +GH+ + D +++W + L GH V ++ FS
Sbjct: 256 PAQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSH 315
Query: 338 RPGSVYQLLSSSDDGTCRIWD 358
L S+SDDGT +IWD
Sbjct: 316 ---DSRLLASASDDGTVKIWD 333
Score = 81 (33.6 bits), Expect = 3.6e-08, Sum P(4) = 3.6e-08
Identities = 31/108 (28%), Positives = 52/108 (48%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDV-HPFNPRIAMSA 601
VN + +S D+R + +A D + +W AA G++ H+ G L H N + SA
Sbjct: 560 VNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSN--LLASA 617
Query: 602 GYDGKTIVWDIWEGIPIRI-----YEISRFR-DGASIILSDDVGQLYI 643
DG +WD+ E +R +EI R + D + L +VG++ +
Sbjct: 618 MDDGTVKIWDM-EIYSLRHTFDLDHEIQRIQFDKSMSSLITNVGRIQL 664
Score = 50 (22.7 bits), Expect = 1.0e-09, Sum P(4) = 1.0e-09
Identities = 21/96 (21%), Positives = 45/96 (46%)
Query: 968 AGIRRLVLKLPVR-DSNKHELQERTSDKCNQLVSVIGTSSEAHQEATEGNGNRVSYVGNN 1026
AG R + +KL D + +++ER + +L + S E + G+ N + +
Sbjct: 1098 AG-RAISVKLKEELDRSGDDVKERLI-QVQRLFEGLSRSPELYTNPIHGSENIDNQF--S 1153
Query: 1027 CSSVDANCGLMERRGRGQFDKLEDYLN-LSNGYKDG 1061
C+ +D G+ +R G+ + ++ ++ N +K G
Sbjct: 1154 CAIIDFASGIPQRHGKSREPSIDKIISGQKNIFKQG 1189
Score = 43 (20.2 bits), Expect = 1.0e-09, Sum P(4) = 1.0e-09
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 1712 ESYFGRNTDLSTKIKRLSDLVTRTLSSLKAPQFHD 1746
E G+ D + + ++ D V S +K P+ +D
Sbjct: 1499 EGAIGQTNDETQRFRQFCDQVAEDESIMKGPRKYD 1533
Score = 42 (19.8 bits), Expect = 6.3e-09, Sum P(4) = 6.3e-09
Identities = 13/52 (25%), Positives = 29/52 (55%)
Query: 1227 NGCDALHGSSLDIKPNSLPEVLESDGTN-RTSSDRGADGSQRLNAQIDSTSE 1277
NG L+ ++++ + + ++L S+G N RT+ G S +L ++D + +
Sbjct: 1065 NGQTPLYLAAINGRLEAAQKLL-SEGANFRTTDQAGRAISVKLKEELDRSGD 1115
Score = 41 (19.5 bits), Expect = 1.6e-09, Sum P(4) = 1.6e-09
Identities = 17/63 (26%), Positives = 26/63 (41%)
Query: 1229 CDALHGSSLDIKPNSLPEVLESDGTNRTSSDRGADGSQRLNAQIDSTSEHDPLGSHSHSH 1288
C L S LD N+ PE L+ + + D +QR D +E + + +
Sbjct: 1475 CKCLT-SCLDPIINTRPE-LQFQEFYEGAIGQTNDETQRFRQFCDQVAEDESIMKGPRKY 1532
Query: 1289 DPL 1291
DPL
Sbjct: 1533 DPL 1535
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 149 (57.5 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 35/141 (24%), Positives = 61/141 (43%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
++GH ++ F G+++ + S D+ +KIW + GH+ I+D
Sbjct: 42 LKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSK 101
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D I++W + G + L+GH V ++F+P+ + +S S D RIWD
Sbjct: 102 LICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLI---VSGSFDENVRIWD 158
Query: 359 ARYSQFSPRIYIPRPSDAVAG 379
+ + I SD V G
Sbjct: 159 VNTGECTKMI--SAHSDPVTG 177
Score = 148 (57.2 bits), Expect = 8.8e-08, Sum P(3) = 8.8e-08
Identities = 31/127 (24%), Positives = 61/127 (48%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ + GH+ + + + + + + SDD+ +KIW +E+ + + +GH+ +
Sbjct: 82 RTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQ 141
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D +R+W + G ++ H+ VT + F+ R G++ ++S S DGT RI
Sbjct: 142 SNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFN-RDGTL--VVSGSYDGTVRI 198
Query: 357 WDARYSQ 363
WD Q
Sbjct: 199 WDTTTGQ 205
Score = 128 (50.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 30/129 (23%), Positives = 55/129 (42%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
V+ + +K ++GH+ V+ F+ +++GS D V+IW + T C H +T
Sbjct: 117 VESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVT 176
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAA-VTAIAFSPRPGSVYQLLSS 348
D +R+W G ++ + V+ + FSP G +L+
Sbjct: 177 GVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPN-GKF--VLAG 233
Query: 349 SDDGTCRIW 357
+ D T R+W
Sbjct: 234 TLDNTLRLW 242
Score = 61 (26.5 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS 452
FN +GT+ V+GS D R+W+ + Q + I G E V++V+FS
Sbjct: 180 FNRDGTLVVSGSYDGTVRIWDTT------TGQLLNTISTEDGKE--VSFVKFS 224
Score = 55 (24.4 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 13/59 (22%), Positives = 27/59 (45%)
Query: 553 RFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI-VW 610
++++ D I ++N +V +L GH + + HP IA A +++ +W
Sbjct: 274 KWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIW 332
Score = 43 (20.2 bits), Expect = 6.8e-08, Sum P(3) = 6.8e-08
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 400 FNANGTVFVTGSSDTLARVWN 420
F+ NG + G+ D R+W+
Sbjct: 223 FSPNGKFVLAGTLDNTLRLWS 243
Score = 43 (20.2 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 404 GTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDV 446
G VTGS D L ++N Q + L+GHE+ V
Sbjct: 273 GKWIVTGSEDNLIYIYNL---------QTREIVQTLAGHEDVV 306
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 161 (61.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 37/123 (30%), Positives = 57/123 (46%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
+K + GH V +FD + +I+G D +K+W+ T C+A+ RGHE +
Sbjct: 416 VKTLTGHTKGVRALVFDN--QKLISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTN 473
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D +RVW + D LRGHT V + +++ S+SDD T R
Sbjct: 474 KSIVSGSA--DHTVRVWHV-DSRTCYTLRGHTDWVNHVKIHSASNTIF---SASDDTTIR 527
Query: 356 IWD 358
+WD
Sbjct: 528 MWD 530
Score = 156 (60.0 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 39/127 (30%), Positives = 61/127 (48%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
IK GH + V C F+R +Y++TGS D +KIW +++ C+ + GH +
Sbjct: 376 IKTFTGHSDGVTCLQFNR--KYLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVR--ALVF 431
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D I+VW G I+ RGH AV ++ F+ + ++S S D T R
Sbjct: 432 DNQKLISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTNK-----SIVSGSADHTVR 486
Query: 356 IW--DAR 360
+W D+R
Sbjct: 487 VWHVDSR 493
Score = 73 (30.8 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 556 LAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWEG 615
L + +D I +W+ A G + + GH E + + F RI +S +D VWD+ G
Sbjct: 642 LTSALDNTIKLWDVATGKCIRTQFGHIEGVWSIAADTF--RI-ISGAHDRLIKVWDLQNG 698
Score = 49 (22.3 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 547 VWSL--DNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYV 587
VWS+ D +++ D I VW+ +G +H+ + ++ + V
Sbjct: 671 VWSIAADTFRIISGAHDRLIKVWDLQNGKCLHTFSNNSSVSCV 713
Score = 37 (18.1 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 1322 DGGGVGESTLNANNNNFHESAT 1343
D + ST +NNN +AT
Sbjct: 611 DTATINRSTFTPSNNNTATTAT 632
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 125 (49.1 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 31/138 (22%), Positives = 57/138 (41%)
Query: 221 YAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLAS 280
+AI KP+ ++ + GH + + FD S V G+ +K+W +E A + +
Sbjct: 44 WAIGKPNAILS-------LYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRT 96
Query: 281 CRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPG 340
GH + D +++W + I +GHT V + F+P G
Sbjct: 97 LTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTP-DG 155
Query: 341 SVYQLLSSSDDGTCRIWD 358
++S +D ++WD
Sbjct: 156 R--WIVSGGEDNVVKVWD 171
Score = 124 (48.7 bits), Expect = 1.1e-09, Sum P(4) = 1.1e-09
Identities = 32/120 (26%), Positives = 48/120 (40%)
Query: 242 HRNAVYCAIFDR-SGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
H AV C R S R ++TG +D V +W++ + S GH I
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLV 74
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
I++W L + + L GH + ++ F P G + S S D +IWD R
Sbjct: 75 AAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPF-GEFFA--SGSLDTNLKIWDIR 131
Score = 124 (48.7 bits), Expect = 0.00057, Sum P(4) = 0.00057
Identities = 28/129 (21%), Positives = 55/129 (42%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
+++ + ++ + GHR+ F G + +GS D +KIW + C+ + +GH +
Sbjct: 88 LEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D +++VW L G + + H + ++ F P + L + S
Sbjct: 148 VLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHE---FLLATGS 204
Query: 350 DDGTCRIWD 358
D T + WD
Sbjct: 205 ADKTVKFWD 213
Score = 100 (40.3 bits), Expect = 1.1e-09, Sum P(4) = 1.1e-09
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
RGVN++ ++ D R++++ D + VW+ G L+H H LD HP ++
Sbjct: 144 RGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHE--FLLA 201
Query: 601 AGYDGKTI-VWDI 612
G KT+ WD+
Sbjct: 202 TGSADKTVKFWDL 214
Score = 58 (25.5 bits), Expect = 1.1e-09, Sum P(4) = 1.1e-09
Identities = 28/127 (22%), Positives = 46/127 (36%)
Query: 1170 ESKC-----VNTTDEDTTPYPNHLQNGTIQPSELKEILTPVSTKL--RIRSKRILRD--A 1220
ESKC N+ +P NH +N + +P ++ R+ S + R+
Sbjct: 562 ESKCRVFGRFNSRSLVRSPPRNHDENSDLISYNANRDSSPTESRKGGRLHSLVLNRERRG 621
Query: 1221 DVENQNNGCDALHGSSLDIKPNSLPEVLESDGTNRTSSDRGADGSQRLNAQIDSTSEHDP 1280
N + G ++ PNS P + N D+G + + D +HD
Sbjct: 622 RFSNFEGPVSSSSGGNMTA-PNSRPSNMLKQRGNHVPVDQGITSASEEDIVADIMGQHDQ 680
Query: 1281 LGSHSHS 1287
S HS
Sbjct: 681 FVSSMHS 687
Score = 58 (25.5 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 27/90 (30%), Positives = 42/90 (46%)
Query: 547 VWSLD---NRFVLAA-IMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
+ SLD + F+LA D + W+ L+ S G TE+T V + FNP
Sbjct: 188 IQSLDFHPHEFLLATGSADKTVKFWDLETFELIGS--GGTETTGVRCL-TFNP------- 237
Query: 603 YDGKTIVWDIWEGIPIRIYEISRFRDGASI 632
DGK+++ + E + I +E R DG +
Sbjct: 238 -DGKSVLCGLQESLKIFSWEPIRCHDGVDV 266
Score = 48 (22.0 bits), Expect = 1.1e-09, Sum P(4) = 1.1e-09
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 1004 TSSEAHQEATEGNGNRVSYVGNNCSSV 1030
T S +H E T G+G + + +N S V
Sbjct: 309 TQSNSHPEKTSGSGRDQAGLNDNSSKV 335
Score = 46 (21.3 bits), Expect = 3.6e-08, Sum P(3) = 3.6e-08
Identities = 25/94 (26%), Positives = 42/94 (44%)
Query: 1000 SVIGTSSEAHQEATEGNGNRVSYVGNNCSS-VDANCG------LMERRGRGQFDKLEDYL 1052
S++ + H E N + +SY N SS ++ G ++ R RG+F E +
Sbjct: 575 SLVRSPPRNHDE----NSDLISYNANRDSSPTESRKGGRLHSLVLNRERRGRFSNFEGPV 630
Query: 1053 NLSNGYKDGKIRWGGVRARSSKRLKI-GEMMPLD 1085
+ S+G G + +R S LK G +P+D
Sbjct: 631 SSSSG---GNMT--APNSRPSNMLKQRGNHVPVD 659
Score = 45 (20.9 bits), Expect = 0.00024, Sum P(4) = 0.00024
Identities = 20/75 (26%), Positives = 29/75 (38%)
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASR 459
F +G V+G D + +VW+ + + HE HE + + F
Sbjct: 151 FTPDGRWIVSGGEDNVVKVWDLT------AGKLLHEF---KSHEGKIQSLDFH----PHE 197
Query: 460 FSLADSSKEDSTPKF 474
F LA S D T KF
Sbjct: 198 FLLATGSA-DKTVKF 211
Score = 41 (19.5 bits), Expect = 0.00045, Sum P(4) = 0.00045
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 387 SAGPQSHQIFCCAFNANGTVFVTGSSDTL 415
S G ++ + C FN +G + G ++L
Sbjct: 222 SGGTETTGVRCLTFNPDGKSVLCGLQESL 250
Score = 38 (18.4 bits), Expect = 0.00087, Sum P(4) = 0.00087
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 391 QSHQ--IFCCAFNANGTVFVTGSSDTLARVWN 420
+SH+ I F+ + + TGS+D + W+
Sbjct: 182 KSHEGKIQSLDFHPHEFLLATGSADKTVKFWD 213
Score = 37 (18.1 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 1346 SRRTRSMGLKTTTCDPDNVSSNLRLEQHNQPEDMYSGHNRSTSRCQLPHEEWGS 1399
S+ S L ++ +PD +S+L +QP + + + +T P +E GS
Sbjct: 503 SKAADSRRLSSSRNEPDLPTSSLLERSQSQPIEPITLQDGNT----YPSDEGGS 552
Score = 37 (18.1 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 1345 GSRRTRSMGLKTTTCDPDNVS 1365
GS T + G++ T +PD S
Sbjct: 221 GSGGTETTGVRCLTFNPDGKS 241
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 179 (68.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 38/120 (31%), Positives = 57/120 (47%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH V C F + Y+ TGS D+ V++WS + + GH G +
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYL 483
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
D +++W L G LRGHT ++T++AFSP G + S+S D + R+WD R
Sbjct: 484 ASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLI---ASASMDNSVRVWDIR 540
Score = 137 (53.3 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 55/216 (25%), Positives = 91/216 (42%)
Query: 210 HHRAPS-IRAACYAIAKPSTMVQKM-QNIKRVRGHRNAVYCAIF--DRSGRYVITGSDDR 265
HH S IR AC + + +K +RGH VY F D SG +++ S+D
Sbjct: 307 HHVDTSRIRLACDTLEEEENEEDNTGTEMKILRGHCGPVYSTRFLADSSG--LLSCSEDM 364
Query: 266 LVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRG 325
++ W + + +GH + D D R+W P+ + G
Sbjct: 365 SIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAG 424
Query: 326 HTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPS 385
H A V + F P S Y L + S D T R+W A+ S R++ V + +P+
Sbjct: 425 HLADVDCVKF--HPNSNY-LATGSTDKTVRLWSAQQGN-SVRLFTGHRGP-VLSLSFSPN 479
Query: 386 ----SSAGPQSHQIFCCAFNANGTVF--VTGSSDTL 415
+SAG + ++ A+GT+F + G +D++
Sbjct: 480 GKYLASAG-EDQRLKLWDL-ASGTLFKELRGHTDSI 513
Score = 60 (26.2 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 16/58 (27%), Positives = 25/58 (43%)
Query: 399 AFNANGTVFVTGSSDTLARVWNACKP--NTDDSDQPNHEIDVLSGHENDVNYVQFSGC 454
AF+ + + + S D RVW+ NT + V +G ++V VQF C
Sbjct: 517 AFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSNVLSVQFMAC 574
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 198 (74.8 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 46/143 (32%), Positives = 70/143 (48%)
Query: 227 STMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETA-YCLASCRGHE 285
+T+ + Q I + GH + V F GRY+ T S+D+ ++W +E+ CL GH
Sbjct: 371 ATVSIETQPILSLEGHSDVVNRCSFHPCGRYITTSSNDKSWRLWDLESGGKCLLDQEGHS 430
Query: 286 GDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQL 345
+ D ++R+W L G PI +GH+ V ++ +SP G YQL
Sbjct: 431 DGVMGISIQSDGSLLATGSQDGLVRIWDLRSGRPILYFQGHSKQVISVDWSPN-G--YQL 487
Query: 346 LSSSDDGTCRIWDARYSQFSPRI 368
SSS+D T IWD R + S +I
Sbjct: 488 ASSSEDNTVVIWDIRKKEQSCQI 510
Score = 39 (18.8 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 14/47 (29%), Positives = 17/47 (36%)
Query: 1328 ESTLNANNNNFHESATDGSRRTRSMGLKTTTCDPDNVSSNLRLEQHN 1374
+ST NNNN T S K T P+ S E H+
Sbjct: 525 QSTQTNNNNNNSSPGCVNYLATCSFDGKIKTWSPNTWSPLATFEGHS 571
Score = 38 (18.4 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 3 LRKYIPSADAPSGTMKPLSFSSKVHENAQLAGSD 36
LR+ + + GT +S + E QL GSD
Sbjct: 104 LREILIERNIIDGTPLLISNKKEQEEQEQLEGSD 137
>UNIPROTKB|B3KVK2 [details] [associations]
symbol:GNB1 "cDNA FLJ16663 fis, clone THYMU2005759, highly
similar to Guanine nucleotide-binding proteinG(I)/G(S)/G(T) subunit
beta 1" species:9606 "Homo sapiens" [GO:0001917 "photoreceptor
inner segment" evidence=IEA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IEA] [GO:0007200 "phospholipase C-activating
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010659 "cardiac muscle cell apoptotic process" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0042622 "photoreceptor
outer segment membrane" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 GO:GO:0001750
EMBL:AL109917 EMBL:AL031282 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 UniGene:Hs.430425 HGNC:HGNC:4396 ChiTaRS:GNB1
EMBL:AK122949 IPI:IPI00642117 ProteinModelPortal:B3KVK2 SMR:B3KVK2
STRING:B3KVK2 PRIDE:B3KVK2 Ensembl:ENST00000455156
OrthoDB:EOG4GHZR3 ArrayExpress:B3KVK2 Bgee:B3KVK2 Uniprot:B3KVK2
Length = 240
Score = 151 (58.2 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 33/127 (25%), Positives = 54/127 (42%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ + GH + C F ++T S D +W +ET + GH GD+
Sbjct: 37 RELAGHTGYLSCCRF-LDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 95
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D ++W + +G+ GH + + AI F P G+ + + SDD TCR+
Sbjct: 96 TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPN-GNAFA--TGSDDATCRL 152
Query: 357 WDARYSQ 363
+D R Q
Sbjct: 153 FDLRADQ 159
Score = 60 (26.2 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 17/70 (24%), Positives = 27/70 (38%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G+ + +S R +LA D VW+A L GH L V +A +
Sbjct: 172 GITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVA-TG 230
Query: 602 GYDGKTIVWD 611
+D +W+
Sbjct: 231 SWDSFLKIWN 240
Score = 58 (25.5 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 399 AFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNY--VQFSGCAV 456
+F+ +G + + G D VW+A K +D+ VL+GH+N V+ V G AV
Sbjct: 177 SFSKSGRLLLAGYDDFNCNVWDALK-----ADRAG----VLAGHDNRVSCLGVTDDGMAV 227
Query: 457 AS 458
A+
Sbjct: 228 AT 229
Score = 54 (24.1 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 388 AGPQSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
AG +++ C +G TGS D+ ++WN
Sbjct: 209 AG-HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 240
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 150 (57.9 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 33/119 (27%), Positives = 54/119 (45%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GHRN + F S +++ S+D +K+W E+ + +GH + D
Sbjct: 104 GHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLL 163
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA 359
D I++W + L GH V+ + F+P G QL+SSS D T ++W+A
Sbjct: 164 ASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPS-GD--QLISSSRDKTIKVWEA 219
Score = 148 (57.2 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 57/234 (24%), Positives = 89/234 (38%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ ++GH NAV FD++G + + S D +K+W +T C+ + GH+ +++
Sbjct: 142 RTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPS 201
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D I+VW G I L GH V I S GS + S S+D T +
Sbjct: 202 GDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVS-EDGSC--IASCSNDQTIKT 258
Query: 357 WD-------ARYSQ---------FSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAF 400
W+ A Y + FS I P ++ GP + + C +
Sbjct: 259 WNIVKGECLATYREHSHVVECLAFSTANIIDIPGSLLSTPEGKSKVKQGPGGNLVGQCGY 318
Query: 401 NANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGC 454
A TGS D ++W + GH+N V V+F C
Sbjct: 319 LA------TGSRDKTIKIWELATGRC---------LATYIGHDNWVRAVRFHPC 357
Score = 144 (55.7 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 29/101 (28%), Positives = 46/101 (45%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
+K + GH + V C F SG +I+ S D+ +K+W T YC+ + GHE +
Sbjct: 183 VKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSE 242
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFS 336
D I+ W + G ++ R H+ V +AFS
Sbjct: 243 DGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFS 283
Score = 75 (31.5 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 561 DCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI-VWDIWEG 615
D I +W A G + + GH + HP + +S G D KTI VWDI +G
Sbjct: 325 DKTIKIWELATGRCLATYIGHDNWVRAVRFHPCG-KFLLSVG-DDKTIRVWDIAQG 378
Score = 71 (30.1 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 20/61 (32%), Positives = 29/61 (47%)
Query: 553 RFVLAAIMDCRICVWNAADGSLVHSLT-GHTESTYVLDVHPFNPRIAMSAGYDGKTIVWD 611
+F+L+ D I VW+ A G + ++ HT LD NP IA + G D VW
Sbjct: 359 KFLLSVGDDKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIA-TGGVDDVIKVWK 417
Query: 612 I 612
+
Sbjct: 418 L 418
Score = 47 (21.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 13/45 (28%), Positives = 19/45 (42%)
Query: 375 DAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVW 419
D GR + + A +H I C F + TG D + +VW
Sbjct: 374 DIAQGRCIKTINEA--HTHFISCLDFCLHNPHIATGGVDDVIKVW 416
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 145 (56.1 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 35/141 (24%), Positives = 60/141 (42%)
Query: 247 YCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXD 306
Y A+ +++ SDD + +W C+ GH+ + D D
Sbjct: 337 YQAVCPDEVESLVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFD 396
Query: 307 CIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSP 366
+R+WR DG ++ RGH AV +A+S ++S S D T ++W + + +
Sbjct: 397 KSVRLWRASDGQYMATFRGHVQAVYTVAWS---ADSRLIVSGSKDSTLKVWSVQTKKLAQ 453
Query: 367 RIYIPRPSDAVAGRNMAPSSS 387
+ P +D V G + AP S
Sbjct: 454 EL--PGHADEVFGVDWAPDGS 472
Score = 130 (50.8 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 35/126 (27%), Positives = 51/126 (40%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH AV F G ++ +GS D V++W + T +C GH+ +
Sbjct: 117 GHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDGKRL 176
Query: 301 XXXXXDCIIRVWRLPDGLPIS-VLRGHTAAVTAIAFSP--RPGSVYQLLSSSDDGTCRIW 357
I +W G L GH + +A+ P R +L S+S DG CRIW
Sbjct: 177 ASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIW 236
Query: 358 DARYSQ 363
D + Q
Sbjct: 237 DVKLGQ 242
Score = 100 (40.3 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 32/129 (24%), Positives = 49/129 (37%)
Query: 213 APSIRAACYAIAKPSTMVQKMQNIKRVRGHRNAVYCAIF-----DRSGRYVITGSDDRLV 267
A +A I P T QK + + GH+ + C + D R + + S D
Sbjct: 177 ASGCKAGSIIIWDPETGQQKGRPLS---GHKKHINCLAWEPYHRDPECRKLASASGDGDC 233
Query: 268 KIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHT 327
+IW ++ CL + GH +T D +++WR DG+ GH
Sbjct: 234 RIWDVKLGQCLMNIAGHTNAVT-AVRWGGAGLIYTSSKDRTVKMWRAADGILCRTFSGHA 292
Query: 328 AAVTAIAFS 336
V IA S
Sbjct: 293 HWVNNIALS 301
Score = 98 (39.6 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 37/169 (21%), Positives = 62/169 (36%)
Query: 458 SRFSLADSSKEDSTPKFKNSWFCHDNI---VTCSRDGSAIIWIPRSRR------SHPKAA 508
S SL+ ++S K + C D + V+CS D + +W + H
Sbjct: 320 SHLSLSTEELQESALK-RYQAVCPDEVESLVSCSDDNTLYLWRNNQNKCVERMTGHQNVV 378
Query: 509 ---RWTQAYHLKVXXXXXXXXXXXXXXXXXILPTPRG----VNMIVWSLDNRFVLAAIMD 561
+++ L + T RG V + WS D+R +++ D
Sbjct: 379 NDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKD 438
Query: 562 CRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVW 610
+ VW+ L L GH + + +D P R+A S G D +W
Sbjct: 439 STLKVWSVQTKKLAQELPGHADEVFGVDWAPDGSRVA-SGGKDKVIKLW 486
Score = 63 (27.2 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 26/94 (27%), Positives = 39/94 (41%)
Query: 561 DCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIRI 620
DCRI W+ G + ++ GHT + V V + ++ D +W +GI R
Sbjct: 232 DCRI--WDVKLGQCLMNIAGHTNA--VTAVRWGGAGLIYTSSKDRTVKMWRAADGILCRT 287
Query: 621 YEISRFRDGASIILSDDVGQLYILNTGQGESQKD 654
+ +I LS D Y+L TG KD
Sbjct: 288 FS-GHAHWVNNIALSTD----YVLRTGPFHPVKD 316
Score = 54 (24.1 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDV 438
++ A++A+ + V+GS D+ +VW+ + + P H +V
Sbjct: 420 VYTVAWSADSRLIVSGSKDSTLKVWSV-QTKKLAQELPGHADEV 462
Score = 49 (22.3 bits), Expect = 0.00092, Sum P(3) = 0.00092
Identities = 36/177 (20%), Positives = 61/177 (34%)
Query: 439 LSGHENDVNYVQFSGCAVASRFSLADSSKEDSTPKFKNSWFCHDNIVTCSRDGSAIIWIP 498
++GH N V V++ G + + SSK D T K W D I+ + G A W+
Sbjct: 247 IAGHTNAVTAVRWGGAGL-----IYTSSK-DRTVKM---WRAADGILCRTFSGHAH-WVN 296
Query: 499 RSRRSHPKAARWTQAYHLKVXXXXXXXXXXXXXXXXXILPTPRGVNMIVWSLDNRFVLAA 558
S R T +H L + V + +++
Sbjct: 297 NIALSTDYVLR-TGPFHPVKDRSKSHLSLSTEELQESALKRYQAV----CPDEVESLVSC 351
Query: 559 IMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWEG 615
D + +W V +TGH + P + ++ SA +D +W +G
Sbjct: 352 SDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSP-DVKLIASASFDKSVRLWRASDG 407
Score = 37 (18.1 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 5/14 (35%), Positives = 9/14 (64%)
Query: 719 GIEWRPSSLKLAVG 732
G++W P ++A G
Sbjct: 464 GVDWAPDGSRVASG 477
>POMBASE|SPBC713.05 [details] [associations]
symbol:SPBC713.05 "WD repeat protein, human MAPK
organizer 1 (MORG1) family (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISS]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC713.05 GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0071276 GO:GO:0071585
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045292
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR RefSeq:NP_595344.1
ProteinModelPortal:Q9C1X0 EnsemblFungi:SPBC713.05.1 GeneID:2541181
KEGG:spo:SPBC713.05 OrthoDB:EOG4K9FNP NextBio:20802293
Uniprot:Q9C1X0
Length = 297
Score = 167 (63.8 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 37/133 (27%), Positives = 66/133 (49%)
Query: 251 FDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIR 310
++R+G+YV+ ++R+V++W++++ C+ GH +I D D I+
Sbjct: 22 YNRTGKYVLAAGNERVVRLWNVKSGACIHEYAGHGHEILDLDLVYDSTKFASCGGDKFIQ 81
Query: 311 VWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYI 370
VW + G L GH A + I ++ S+ L S S D R+WD R + FSP +
Sbjct: 82 VWDVNTGKVDRRLGGHLAQINTIRYN-EDSSI--LASGSFDSKVRLWDCRSNSFSPIQVL 138
Query: 371 PRPSDAVAGRNMA 383
D+V+ ++A
Sbjct: 139 ADAKDSVSSIDIA 151
Score = 48 (22.0 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 16/61 (26%), Positives = 26/61 (42%)
Query: 554 FVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPR--IAMSAGYDGKTIVWD 611
F L + ++ I + + G ++ S G Y + FN I S DGK +WD
Sbjct: 194 FSLISSLNSSIHLLDQETGKILKSYIGLKNMEYRVR-SSFNQSETIVFSGSEDGKVYLWD 252
Query: 612 I 612
+
Sbjct: 253 L 253
Score = 41 (19.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 399 AFNANGTVFVTGSSDTLARVWN 420
+FN + T+ +GS D +W+
Sbjct: 231 SFNQSETIVFSGSEDGKVYLWD 252
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 161 (61.7 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 36/120 (30%), Positives = 57/120 (47%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH + V C F + Y+ TGS D+ V++WS + GH G +
Sbjct: 436 GHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYL 495
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
D +++W L G LRGHT +++++FS + S+ + S+S D T R+WD R
Sbjct: 496 ASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFS-QDSSL--VASASMDNTVRVWDIR 552
Score = 139 (54.0 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 44/164 (26%), Positives = 68/164 (41%)
Query: 211 HRAP--SIRAACYAIAKPSTMVQKM-QNIKRVRGHRNAVYCAIF--DRSGRYVITGSDDR 265
H+A IR AC + + + IK +RGH VY F D SG +++ S+D
Sbjct: 319 HKADVSKIRLACDVLEEEADDEDASGSEIKTLRGHSGPVYRTAFLTDASG--LLSCSEDS 376
Query: 266 LVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRG 325
V+ W +++ RGH + D D R+W P+ + G
Sbjct: 377 TVRYWDLKSFTNTVLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAG 436
Query: 326 HTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIY 369
H + V + F P S Y + + S D T R+W R S R++
Sbjct: 437 HLSDVDCVKF--HPNSNY-IATGSTDKTVRLWSTRQGA-SVRLF 476
Score = 137 (53.3 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 35/129 (27%), Positives = 50/129 (38%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
++ N RGH V+ Y T S DR ++WS Y L GH D+
Sbjct: 383 LKSFTNTVLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVD 442
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D +R+W G + + GH V +AFSP G Y L S+
Sbjct: 443 CVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPN-GK-Y-LASAG 499
Query: 350 DDGTCRIWD 358
+D ++WD
Sbjct: 500 EDQRLKLWD 508
Score = 90 (36.7 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 24/73 (32%), Positives = 38/73 (52%)
Query: 541 RG-VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAM 599
RG V + +S + +++ +A D R+ +W+ A G L L GHT++ L + +A
Sbjct: 480 RGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDSSLVA- 538
Query: 600 SAGYDGKTIVWDI 612
SA D VWDI
Sbjct: 539 SASMDNTVRVWDI 551
Score = 88 (36.0 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 49/188 (26%), Positives = 65/188 (34%)
Query: 256 RYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLP 315
R + G D+ VK+WS+ A H+ D++ D
Sbjct: 293 RLLAAGFDNSAVKLWSLRARKLKAG--PHKADVSKIRLACDVLEEEADDEDA-------- 342
Query: 316 DGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR-------YS------ 362
G I LRGH+ V AF LLS S+D T R WD + Y
Sbjct: 343 SGSEIKTLRGHSGPVYRTAFLTDASG---LLSCSEDSTVRYWDLKSFTNTVLYRGHAYPV 399
Query: 363 ---QFSP-RIYIPRPS-DAVA-----GRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSS 412
SP +Y S D A R AG S + C F+ N TGS+
Sbjct: 400 WDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLS-DVDCVKFHPNSNYIATGST 458
Query: 413 DTLARVWN 420
D R+W+
Sbjct: 459 DKTVRLWS 466
Score = 50 (22.7 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 399 AFNANGTVFVTGSSDTLARVWNACKPN-TDDSDQPNHE-IDVLSGHENDVNYVQFSGC 454
+F+ + ++ + S D RVW+ + + +D + E I +G +++ VQF C
Sbjct: 529 SFSQDSSLVASASMDNTVRVWDIRNAHGSAPTDGCSSELIGQYTGSTSNILNVQFMAC 586
Score = 39 (18.8 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 6/26 (23%), Positives = 12/26 (46%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWN 420
+ AF+ NG + D ++W+
Sbjct: 483 VLTLAFSPNGKYLASAGEDQRLKLWD 508
>POMBASE|SPAC25H1.08c [details] [associations]
symbol:SPAC25H1.08c "ribosome biogenesis protein Sqt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC25H1.08c GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 HOGENOM:HOG000261676 GO:GO:0000027 HSSP:Q04724
KO:K14818 OrthoDB:EOG45TGWZ PIR:T38388 RefSeq:NP_593812.1
ProteinModelPortal:O13982 STRING:O13982 PRIDE:O13982
EnsemblFungi:SPAC25H1.08c.1 GeneID:2542715 KEGG:spo:SPAC25H1.08c
OMA:PICACAS NextBio:20803763 Uniprot:O13982
Length = 399
Score = 145 (56.1 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 47/187 (25%), Positives = 71/187 (37%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
+ I ++ GH++++ + G Y+ TG D V++W T + + +I
Sbjct: 95 EQICQLTGHKDSIVAIDWSFDGTYIATGGMDSQVRLWKSSTGFEFITAFETVDEIVWLSW 154
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D I +W LP G + V+ GHTA V A F P PG +L + D GT
Sbjct: 155 HPKGLFLAAGCNDGSIWMWSLPSGKVVQVMYGHTAPVNAGKFIP-PGVGKRLATVDDSGT 213
Query: 354 CRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSD 413
+W+ P P + P + F C NA G V G S
Sbjct: 214 LIVWN-------PATGAPECRMSSDDHRFDPGNEETAAGWTSFDC--NAEGNVLFLGGSS 264
Query: 414 TLARVWN 420
+V N
Sbjct: 265 GKVKVVN 271
Score = 78 (32.5 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 554 FVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWD 611
++L A DC I W+ G L+ TGH E + + P R+ + D + +V+D
Sbjct: 340 YLLTACADCVIRKWDVRSGQLLGEYTGHQEPILCMAITPDGKRVVTGSD-DTELLVFD 396
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 175 (66.7 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 89/402 (22%), Positives = 151/402 (37%)
Query: 239 VRGHRNAVYCAIFDR-SGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXX 297
+ GH A+ F S +++GS D +IW +T L + +GH +
Sbjct: 144 IAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPNG 203
Query: 298 XXXXXXXXDCIIRVWRLPDGLPISV-LRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D +R+W G + L+GH +T++A+ P Y L S G R+
Sbjct: 204 AMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEP-----YHLQQS---GHPRL 255
Query: 357 WDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLA 416
A + RI+ D ++ R A +G + + C + G ++ T S D
Sbjct: 256 ASASKDS-TVRIW-----DVISKR--ADIVLSGHKG-SVTCVRWGGTGKIY-TSSHDRTI 305
Query: 417 RVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAV--------ASRFSLADSSKE 468
+VWN+ Q I LS H + VN++ S + + +D+ K
Sbjct: 306 KVWNS---------QTGTLIQTLSAHAHRVNHLALSTDFILRTAYHDHTGKVPESDADKV 356
Query: 469 DSTPK-FKNSWFCHDNIV----TCSRDGSAIIWIPRSRRSHPKA---ARWTQAYHLKVXX 520
K F+ + ++ IV + S D + +W P S S P A + H+
Sbjct: 357 AMAKKRFEKAATINNKIVEKLVSASDDFTMYLWDPESS-SKPVARLLGHQKEVNHVTFSP 415
Query: 521 XXXXXXXXXXXXXXXI--------LPTPRG----VNMIVWSLDNRFVLAAIMDCRICVWN 568
+ + T RG V +S D+R ++++ D + VWN
Sbjct: 416 DMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWN 475
Query: 569 AADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVW 610
G L L GH + + +D P ++ S G D +W
Sbjct: 476 VRTGKLSEDLPGHKDEVFAVDWSPDGQKVG-SGGKDKAIRIW 516
Score = 127 (49.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 29/88 (32%), Positives = 42/88 (47%)
Query: 277 CLASCRGH-EGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAF 335
C AS GH E + D R+W G P+ L+GHT+ V A+++
Sbjct: 140 CSASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSY 199
Query: 336 SPRPGSVYQLLSSSDDGTCRIWDARYSQ 363
SP G++ + + S D T RIWDA+ Q
Sbjct: 200 SPN-GAM--IATGSMDNTVRIWDAKKGQ 224
Score = 93 (37.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 536 ILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNP 595
+L + VN + +S D ++ +A D + +WN DG + +L GH + Y +
Sbjct: 401 LLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQC-CFSADS 459
Query: 596 RIAMSAGYDGKTIVWDIWEG 615
R+ +S+ D VW++ G
Sbjct: 460 RLLVSSSKDTTLKVWNVRTG 479
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 124 (48.7 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 33/100 (33%), Positives = 49/100 (49%)
Query: 320 ISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAG 379
+ +L GHT+ V A A+SP S L S S D T RIW F ++ R +A+
Sbjct: 258 VRILEGHTSEVCACAWSP---SASLLASGSGDATARIWSIPEGSFKA-VHTGRNINALIL 313
Query: 380 RNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVW 419
++ S+ +S + +N GT+ TGS D AR+W
Sbjct: 314 KHAKGKSNE--KSKDVTTLDWNGEGTLLATGSCDGQARIW 351
Score = 105 (42.0 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 57/229 (24%), Positives = 85/229 (37%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGC 454
IF +N G +TGS D A VW+ +++ + + SG DV++
Sbjct: 368 IFSLKWNKKGDYLLTGSVDRTAVVWDV------KAEEWKQQFEFHSGPTLDVDWRNNVSF 421
Query: 455 AVASRFSLADSSKEDSTPKFKNSWFCHDNIVTCSR-DGSAIIWIPRSRRSHPKAARWTQA 513
A +S S+ K T K ++ H V C + D + + S S K W
Sbjct: 422 ATSSTDSMIYLCKIGETRPAK-TFTGHQGEVNCVKWDPTGSLLASCSDDSTAKI--WNIK 478
Query: 514 YHLKVXXXXXXXXXXXXXXXXXILPTPRGVNMIVWSLDNRFVLA-AIMDCRICVWNAADG 572
V PT G N + + + LA A D + +W+A G
Sbjct: 479 QSTFVHDLREHTKEIYTIRWS---PTGPGTN----NPNKQLTLASASFDSTVKLWDAELG 531
Query: 573 SLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIRIY 621
++ S GH E Y L P IA S D +W I EG ++ Y
Sbjct: 532 KMLCSFNGHREPVYSLAFSPNGEYIA-SGSLDKSIHIWSIKEGKIVKTY 579
Score = 73 (30.8 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 42/186 (22%), Positives = 74/186 (39%)
Query: 403 NGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSL 462
N F T S+D++ + CK +P +GH+ +VN V++ SL
Sbjct: 417 NNVSFATSSTDSMIYL---CKIG---ETRP---AKTFTGHQGEVNCVKWDPTG-----SL 462
Query: 463 ADSSKEDSTPKF---KNSWFCHDNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVX 519
S +DST K K S F HD + +++ I W P ++ + T A
Sbjct: 463 LASCSDDSTAKIWNIKQSTFVHD-LREHTKEIYTIRWSPTGPGTNNPNKQLTLA-----S 516
Query: 520 XXXXXXXXXXXXXXXXILPTPRGVNMIVWSL----DNRFVLAAIMDCRICVWNAADGSLV 575
+L + G V+SL + ++ + +D I +W+ +G +V
Sbjct: 517 ASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIV 576
Query: 576 HSLTGH 581
+ TG+
Sbjct: 577 KTYTGN 582
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 151 (58.2 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 55/211 (26%), Positives = 90/211 (42%)
Query: 242 HRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXX 301
H N V CA F GR +++ SDD+ VK+W + C+ S H G +T
Sbjct: 144 HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIA 203
Query: 302 XXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARY 361
D ++VW + + H+AAV A++F P G+ Y L+++S D T +I D
Sbjct: 204 AAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPS-GN-Y-LITASSDSTLKILDLME 260
Query: 362 SQFSPRIYIPR-PSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
+ ++ + P+ VA ++G Q+ + +N + G D AR
Sbjct: 261 GRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM--VWKSNFDIVDYG--DMKAR--- 313
Query: 421 ACKPNTDDSDQ-PNHEIDVLSGHENDVNYVQ 450
P T S P ++ V G + + VQ
Sbjct: 314 RPPPLTSSSGTLPKMDLPVPPGRDRSLESVQ 344
Score = 143 (55.4 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 41/144 (28%), Positives = 69/144 (47%)
Query: 223 IAKPSTMVQKMQNIKR-VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASC 281
+A PS Q+ +++R +GHR+AV C F + +++ +GS D + IW M+
Sbjct: 1 MAAPS---QEDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRF 57
Query: 282 RGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPIS-VLRGHTAAVTAIAFSPRPG 340
GH+ +T D +R+W +P+ S V R HTA V ++ F
Sbjct: 58 TGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQ 116
Query: 341 SVYQLLSSSDDGTCRIWDARYSQF 364
S L+++SDD T ++W +F
Sbjct: 117 S---LVTASDDKTVKVWSTHRQRF 137
Score = 85 (35.0 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKT 607
+S D R +++A D + +W+ +HS H +D HP IA +AG D
Sbjct: 153 FSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIA-AAGMDNTV 211
Query: 608 IVWD 611
VWD
Sbjct: 212 KVWD 215
Score = 71 (30.1 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 32/144 (22%), Positives = 60/144 (41%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWE 614
+ AA MD + VW+A L+ H+ + L HP + ++A D + D+ E
Sbjct: 202 IAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHP-SGNYLITASSDSTLKILDLME 260
Query: 615 GIPIRIYEISRFRDGASIILSDDVGQLYILNTGQGESQK--DAKYDQFFLGDYR----PL 668
G +Y + + A+ + G+ Y + G E + +D GD + P
Sbjct: 261 GR--LLYTLHGHQGPATTVAFSRTGE-YFASGGSDEQVMVWKSNFDIVDYGDMKARRPPP 317
Query: 669 VQDTYGNVLDQETQLAPHR-RNLQ 691
+ + G + + + P R R+L+
Sbjct: 318 LTSSSGTLPKMDLPVPPGRDRSLE 341
Score = 55 (24.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN + + +++ A D + + + +G L+++L GH + A S G
Sbjct: 232 VNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFA-SGG 290
Query: 603 YDGKTIVW 610
D + +VW
Sbjct: 291 SDEQVMVW 298
Score = 38 (18.4 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 13/65 (20%), Positives = 29/65 (44%)
Query: 1404 TVGLRSTRNRRT-SYLFCDSSPIDRRKTHQSLRKGSWLMLSTHEEGSRYIPQLGDEVVYL 1462
TV + R R + S+ ++ H S G++L+ ++ + + + + ++Y
Sbjct: 210 TVKVWDARTHRLLQHYQLHSAAVNALSFHPS---GNYLITASSDSTLKILDLMEGRLLYT 266
Query: 1463 RQGHQ 1467
GHQ
Sbjct: 267 LHGHQ 271
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 158 (60.7 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 46/183 (25%), Positives = 72/183 (39%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYC--LASCRGHEGDITDXXX 293
I + GH V+ FD + +++ +GS DR + +W+ C GH+G I D
Sbjct: 59 IMELTGHSGEVFAVRFDPTAQHIASGSMDRSILLWNTY-GQCENYGILSGHKGAILDLQW 117
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D + W + G I GH + ++ S R + L+S+SDDGT
Sbjct: 118 SRDSKTIFSASADMTLASWDIESGQRIRRYIGHEEVINSVEISKRGQEM--LVSASDDGT 175
Query: 354 CRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVF-VTGSS 412
IWD R + + P AVA +G + I V+ + G
Sbjct: 176 MGIWDPRQKEAIDYLETELPITAVAQSEAGNEVFSGGIDNAIHVWDIRKKAIVYSMAGHM 235
Query: 413 DTL 415
DT+
Sbjct: 236 DTI 238
Score = 113 (44.8 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 48/192 (25%), Positives = 73/192 (38%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGR-YVITGSDDRLVKIWSMETAYCLASCRGHEGDI 288
++ Q I+R GH + + G+ +++ SDD + IW + E I
Sbjct: 138 IESGQRIRRYIGHEEVINSVEISKRGQEMLVSASDDGTMGIWDPRQKEAIDYLET-ELPI 196
Query: 289 TDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSS 348
T D I VW + + + GH +T++ SP + LLS+
Sbjct: 197 TAVAQSEAGNEVFSGGIDNAIHVWDIRKKAIVYSMAGHMDTITSLEVSPDSQT---LLSN 253
Query: 349 SDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFV 408
S D T R WD R F+P R D AP G + + I ++N G
Sbjct: 254 SFDSTVRTWDIR--PFAPTNRHIRTYDG------AP---VGLEKNLIRA-SWNPAGDKIA 301
Query: 409 TGSSDTLARVWN 420
GS D VW+
Sbjct: 302 AGSGDRSVVVWD 313
Score = 60 (26.2 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 15/65 (23%), Positives = 29/65 (44%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKT 607
W+ + A D + VW+ G +++ L GH + + P N I +SA D
Sbjct: 293 WNPAGDKIAAGSGDRSVVVWDFKTGKILYKLPGHKGTVNDVRFTPNNEPIIVSASSDRNL 352
Query: 608 IVWDI 612
++ ++
Sbjct: 353 MLGEL 357
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 174 (66.3 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 47/170 (27%), Positives = 73/170 (42%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH V C F + Y+ TGS D+ V++WS + + GH G +
Sbjct: 442 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYL 501
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
D +++W L G LRGHT +T++ FSP S+ + S+S D + R+WD R
Sbjct: 502 ASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSP-DSSL--IASASMDNSVRVWDIR 558
Query: 361 YSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTG 410
+ Y P+D +G + + Q + F A + VTG
Sbjct: 559 NT------YCSTPADGSSGELVGVYTG---QMSNVLSVQFMACNLLLVTG 599
Score = 137 (53.3 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 33/119 (27%), Positives = 50/119 (42%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXX 299
+GH V+ Y +GS DR ++WS + Y L GH D+
Sbjct: 399 QGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNY 458
Query: 300 XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D +R+W G + + GH V ++AFSP G Y L S+ +D ++WD
Sbjct: 459 LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPN-GK-Y-LASAGEDQRLKLWD 514
Score = 126 (49.4 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 37/136 (27%), Positives = 58/136 (42%)
Query: 236 IKRVRGHRNAVYCAIF--DRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
+K +RGH VY F D SG +++ S+D ++ W + + +GH + D
Sbjct: 353 MKILRGHCGPVYSTRFLADSSG--LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDI 410
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D R+W P+ + GH A V + F P S Y L + S D T
Sbjct: 411 SPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKF--HPNSNY-LATGSTDKT 467
Query: 354 CRIWDARYSQFSPRIY 369
R+W A+ S R++
Sbjct: 468 VRLWSAQQGN-SVRLF 482
Score = 100 (40.3 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 541 RG-VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAM 599
RG V + +S + +++ +A D R+ +W+ A G+L L GHT++ L P + IA
Sbjct: 486 RGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIA- 544
Query: 600 SAGYDGKTIVWDI 612
SA D VWDI
Sbjct: 545 SASMDNSVRVWDI 557
Score = 57 (25.1 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 400 FNANGTVFVTGSSDTLARVWNA----CKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGC 454
F+ + ++ + S D RVW+ C D S + V +G ++V VQF C
Sbjct: 536 FSPDSSLIASASMDNSVRVWDIRNTYCSTPADGSS--GELVGVYTGQMSNVLSVQFMAC 592
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 141 (54.7 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 36/117 (30%), Positives = 56/117 (47%)
Query: 242 HRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXX 301
H N V CA F GR + + SDD+ VK+W + C+ S H G
Sbjct: 145 HINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIA 204
Query: 302 XXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D ++VW + + + HTAAV +++F P G+ Y L+++S+D T +I D
Sbjct: 205 AAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPS-GN-Y-LITASNDSTLKILD 258
Score = 137 (53.3 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 41/140 (29%), Positives = 68/140 (48%)
Query: 230 VQKMQNIKR-VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMET---AYCLASCRGHE 285
V++ +++R RGHR+A+ F + + + +GS D +KIWSM+ AYCL GH+
Sbjct: 6 VEEDPSLERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLV---GHK 62
Query: 286 GDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPIS-VLRGHTAAVTAIAFSPRPGSVYQ 344
+ D + +W +P S V + HTA V ++ FS S
Sbjct: 63 DAVMCVQFSPSGHLVASGSRDKTVCLW-VPSVKGESTVFKAHTATVRSVHFSSDGQS--- 118
Query: 345 LLSSSDDGTCRIWDARYSQF 364
L+++SDD T ++W +F
Sbjct: 119 LVTASDDKTIKVWTVHRQKF 138
Score = 119 (46.9 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 33/118 (27%), Positives = 48/118 (40%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH++AV C F SG V +GS D+ V +W + H +
Sbjct: 60 GHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSL 119
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D I+VW + + L H V FSP G + + S+SDD T ++WD
Sbjct: 120 VTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSP-DGRL--IASASDDKTVKLWD 174
Score = 80 (33.2 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKT 607
+S D R + +A D + +W+ +HS H ++ HP IA +AG D KT
Sbjct: 154 FSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIA-AAGTD-KT 211
Query: 608 I-VWDIWEGIPIRIYEI 623
+ VWD+ ++ Y++
Sbjct: 212 VKVWDVRMNRLLQHYQV 228
Score = 59 (25.8 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 24/111 (21%), Positives = 42/111 (37%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWE 614
+ AA D + VW+ L+ HT + L HP + ++A D + D+ E
Sbjct: 203 IAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHP-SGNYLITASNDSTLKILDLLE 261
Query: 615 GIPIRIYEISRFRDGASIILSDDVGQLYILNTGQGESQKDAKYDQFFLGDY 665
G +Y + + A+ + G + +G + Q F DY
Sbjct: 262 GR--LLYTLHGHQGPATCVAFSRTGDFFA--SGGSDEQVMVWKTNFSAADY 308
Score = 56 (24.8 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 397 CCAFNANGTVFVTGSSDTLARVW 419
C AF+ G F +G SD VW
Sbjct: 277 CVAFSRTGDFFASGGSDEQVMVW 299
Score = 52 (23.4 bits), Expect = 9.1e-07, Sum P(3) = 9.1e-07
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN + + +++ A D + + + +G L+++L GH + A S G
Sbjct: 233 VNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFA-SGG 291
Query: 603 YDGKTIVW 610
D + +VW
Sbjct: 292 SDEQVMVW 299
Score = 47 (21.6 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 16/65 (24%), Positives = 28/65 (43%)
Query: 397 CCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHE-IDVLSGHENDVNYVQF--SG 453
C F+ +G + + S D ++W D+ + E I H N+V+F SG
Sbjct: 151 CARFSPDGRLIASASDDKTVKLW----------DKTSRECIHSFCEHGGFANHVEFHPSG 200
Query: 454 CAVAS 458
+A+
Sbjct: 201 TCIAA 205
Score = 43 (20.2 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 14/65 (21%), Positives = 31/65 (47%)
Query: 1404 TVGLRSTR-NRRTSYLFCDSSPIDRRKTHQSLRKGSWLMLSTHEEGSRYIPQLGDEVVYL 1462
TV + R NR + ++ ++ H S G++L+ ++++ + + L ++Y
Sbjct: 211 TVKVWDVRMNRLLQHYQVHTAAVNSLSFHPS---GNYLITASNDSTLKILDLLEGRLLYT 267
Query: 1463 RQGHQ 1467
GHQ
Sbjct: 268 LHGHQ 272
Score = 40 (19.1 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 6/21 (28%), Positives = 11/21 (52%)
Query: 400 FNANGTVFVTGSSDTLARVWN 420
F+ +GT +D +VW+
Sbjct: 196 FHPSGTCIAAAGTDKTVKVWD 216
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 173 (66.0 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 46/170 (27%), Positives = 71/170 (41%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH V C F + Y+ TGS D+ V++WS + + GH G +
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYL 483
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
D +++W L G LRGHT +T++ FSP G + S+S D + R+WD R
Sbjct: 484 ASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLI---ASASMDNSVRVWDIR 540
Query: 361 YSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTG 410
+ Y P+D + + + Q + F A + VTG
Sbjct: 541 NT------YCSAPADGSSSELVGVYTG---QMSNVLSVQFMACNLLLVTG 581
Score = 137 (53.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 33/119 (27%), Positives = 50/119 (42%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXX 299
+GH V+ Y +GS DR ++WS + Y L GH D+
Sbjct: 381 QGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNY 440
Query: 300 XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D +R+W G + + GH V ++AFSP G Y L S+ +D ++WD
Sbjct: 441 LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPN-GK-Y-LASAGEDQRLKLWD 496
Score = 126 (49.4 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 37/136 (27%), Positives = 58/136 (42%)
Query: 236 IKRVRGHRNAVYCAIF--DRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
+K +RGH VY F D SG +++ S+D ++ W + + +GH + D
Sbjct: 335 MKILRGHCGPVYSTRFLADSSG--LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDI 392
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D R+W P+ + GH A V + F P S Y L + S D T
Sbjct: 393 SPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKF--HPNSNY-LATGSTDKT 449
Query: 354 CRIWDARYSQFSPRIY 369
R+W A+ S R++
Sbjct: 450 VRLWSAQQGN-SVRLF 464
Score = 99 (39.9 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 541 RG-VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAM 599
RG V + +S + +++ +A D R+ +W+ A G+L L GHT++ L P + IA
Sbjct: 468 RGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIA- 526
Query: 600 SAGYDGKTIVWDI 612
SA D VWDI
Sbjct: 527 SASMDNSVRVWDI 539
Score = 55 (24.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 400 FNANGTVFVTGSSDTLARVWNA----CKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGC 454
F+ + + + S D RVW+ C D S + + V +G ++V VQF C
Sbjct: 518 FSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSS--SELVGVYTGQMSNVLSVQFMAC 574
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 168 (64.2 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 38/125 (30%), Positives = 58/125 (46%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH V C F + Y+ TGS D+ V++WS + + GH G +
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYL 483
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
D +++W L G LRGHT +T++ FSP S+ + S+S D + R+WD R
Sbjct: 484 ASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSP-DSSL--IASASMDNSVRVWDIR 540
Query: 361 YSQFS 365
+ S
Sbjct: 541 NTHCS 545
Score = 138 (53.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 33/119 (27%), Positives = 50/119 (42%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXX 299
+GH V+ Y +GS DR ++WS + Y L GH D+
Sbjct: 381 QGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNY 440
Query: 300 XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D +R+W G + + GH V ++AFSP G Y L S+ +D ++WD
Sbjct: 441 LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPN-GK-Y-LASAGEDQRLKLWD 496
Score = 126 (49.4 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 37/136 (27%), Positives = 58/136 (42%)
Query: 236 IKRVRGHRNAVYCAIF--DRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
+K +RGH VY F D SG +++ S+D ++ W + + +GH + D
Sbjct: 335 MKVLRGHCGPVYSTRFLADSSG--LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDI 392
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D R+W P+ + GH A V + F P S Y L + S D T
Sbjct: 393 SPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKF--HPNSNY-LATGSTDKT 449
Query: 354 CRIWDARYSQFSPRIY 369
R+W A+ S R++
Sbjct: 450 VRLWSAQQGN-SVRLF 464
Score = 100 (40.3 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 541 RG-VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAM 599
RG V + +S + +++ +A D R+ +W+ A G+L L GHT++ L P + IA
Sbjct: 468 RGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIA- 526
Query: 600 SAGYDGKTIVWDI 612
SA D VWDI
Sbjct: 527 SASMDNSVRVWDI 539
Score = 63 (27.2 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 400 FNANGTVFVTGSSDTLARVWNA----CKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGC 454
F+ + ++ + S D RVW+ C TD S + + V +G ++V VQF C
Sbjct: 518 FSPDSSLIASASMDNSVRVWDIRNTHCSAPTDGSS--SELVGVYTGQMSNVLSVQFMAC 574
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 134 (52.2 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 33/129 (25%), Positives = 56/129 (43%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
+ K I + GH + V + ++ GS +++W +E A L + GH+ +I
Sbjct: 50 INKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANIC 109
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D I++W + + RGH+ AV + FSP G L S++
Sbjct: 110 SLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGK--WLASAA 166
Query: 350 DDGTCRIWD 358
DD T ++WD
Sbjct: 167 DDHTVKLWD 175
Score = 133 (51.9 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 34/126 (26%), Positives = 52/126 (41%)
Query: 236 IKRVRGHRNAVYCAIFDR-SGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
++ + H + V + + SGR + TG DD V +WS+ C+ S GH +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
IRVW L + L GH A + ++ F P G + S S D
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY-GEF--VASGSQDTNI 129
Query: 355 RIWDAR 360
++WD R
Sbjct: 130 KLWDIR 135
Score = 128 (50.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 32/117 (27%), Positives = 50/117 (42%)
Query: 236 IKRVRGHRNAVYCAI-FDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
++ + GH+ A C++ F G +V +GS D +K+W + C+ RGH +
Sbjct: 98 LRTLMGHK-ANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDD 351
D +++W L G +S GHT V + F P Y L S S D
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE---YLLASGSSD 210
Score = 71 (30.1 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 16/64 (25%), Positives = 31/64 (48%)
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
+ V + +S D +++ +A D + +W+ G ++ GHT V++ HP N + S
Sbjct: 148 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP-NEYLLAS 206
Query: 601 AGYD 604
D
Sbjct: 207 GSSD 210
Score = 51 (23.0 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 15/64 (23%), Positives = 29/64 (45%)
Query: 392 SHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHE--IDVLSGHENDVNYV 449
S + C F+ +G + + D ++W+ S+ P H ++V+ H N+ Y+
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM-SEFPGHTGPVNVVEFHPNE--YL 203
Query: 450 QFSG 453
SG
Sbjct: 204 LASG 207
Score = 39 (18.8 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 1486 GNIRAVEFCKVESLEYATASGSGD 1509
G + VEF EY ASGS D
Sbjct: 190 GPVNVVEF---HPNEYLLASGSSD 210
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 134 (52.2 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 34/126 (26%), Positives = 52/126 (41%)
Query: 236 IKRVRGHRNAVYCAIFDR-SGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
++ + H + V + + SGR + TG DD V +WS+ C+ S GH +
Sbjct: 17 VEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 76
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
IRVW L + L GH A + ++ F P G + S S D
Sbjct: 77 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY-GEF--VASGSQDTNI 133
Query: 355 RIWDAR 360
++WD R
Sbjct: 134 KLWDIR 139
Score = 134 (52.2 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 33/129 (25%), Positives = 56/129 (43%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
+ K I + GH + V + ++ GS +++W +E A L + GH+ +I
Sbjct: 54 INKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANIC 113
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D I++W + + RGH+ AV + FSP G L S++
Sbjct: 114 SLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGK--WLASAA 170
Query: 350 DDGTCRIWD 358
DD T ++WD
Sbjct: 171 DDHTVKLWD 179
Score = 120 (47.3 bits), Expect = 0.00028, P = 0.00028
Identities = 27/103 (26%), Positives = 45/103 (43%)
Query: 236 IKRVRGHRNAVYCAI-FDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
++ + GH+ A C++ F G +V +GS D +K+W + C+ RGH +
Sbjct: 102 LRTLMGHK-ANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 160
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSP 337
D +++W L G +S GHT V + F P
Sbjct: 161 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP 203
Score = 69 (29.3 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 13/52 (25%), Positives = 27/52 (51%)
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHP 592
+ V + +S D +++ +A D + +W+ G ++ GHT V++ HP
Sbjct: 152 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP 203
Score = 48 (22.0 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 12/56 (21%), Positives = 25/56 (44%)
Query: 392 SHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHE--IDVLSGHEND 445
S + C F+ +G + + D ++W+ S+ P H ++V+ H N+
Sbjct: 151 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM-SEFPGHTGPVNVVEFHPNE 205
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 145 (56.1 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 33/128 (25%), Positives = 55/128 (42%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
++GH AV A F+ G Y +T DR +++W+ + + + H ++ D
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNA 73
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D + W + G I RGH V A+ F+ SV ++S+ D + R+WD
Sbjct: 74 KFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDS-SSV--VVSAGFDRSLRVWD 130
Query: 359 ARYSQFSP 366
R P
Sbjct: 131 CRSHSVEP 138
Score = 69 (29.3 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 24/94 (25%), Positives = 40/94 (42%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN I S D VLA +D + + + G L+ GH ++ D N + G
Sbjct: 187 VNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGG 246
Query: 603 Y-DGKTIVWDIWEGIPIRIYEISRFRDGASIILS 635
DG WD+ + ++ +S+FR ++ S
Sbjct: 247 SEDGLVFFWDL---VDAKV--LSKFRAHDLVVTS 275
>UNIPROTKB|Q0VCN2 [details] [associations]
symbol:MORG1 "Mitogen-activated protein kinase organizer 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016301 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:DAAA02019387 EMBL:DAAA02019388 EMBL:BC120088 IPI:IPI00687810
RefSeq:NP_001073118.1 UniGene:Bt.64656 Ensembl:ENSBTAT00000008196
GeneID:780845 KEGG:bta:780845 InParanoid:Q0VCN2 NextBio:20924512
Uniprot:Q0VCN2
Length = 315
Score = 133 (51.9 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 36/154 (23%), Positives = 61/154 (39%)
Query: 225 KPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGH 284
KP + +K + + AV F+ G Y +T D+ +K+W+ L + GH
Sbjct: 7 KPRGPELPQKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGH 66
Query: 285 EGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQ 344
++ D D + +W + G + RGH V + F+ +V
Sbjct: 67 GYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEE-ATV-- 123
Query: 345 LLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVA 378
+LS S D T R WD R + P + D ++
Sbjct: 124 ILSGSIDSTIRCWDCRSRKPEPVQTLDEARDGIS 157
Score = 94 (38.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 35/143 (24%), Positives = 57/143 (39%)
Query: 236 IKRVRGHRNAVYCAI--FDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
++ GH V A FD S + +G D+ V +W + + + RGH G +
Sbjct: 60 LRTYSGHGYEVLDAAGSFDNSS--LCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQF 117
Query: 294 XXXXXXXXXXXXDCIIRVW----RLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D IR W R P+ P+ L ++++ S +++L+ S
Sbjct: 118 NEEATVILSGSIDSTIRCWDCRSRKPE--PVQTLDEARDGISSVKVSD-----HEVLAGS 170
Query: 350 DDGTCRIWDARYSQ-FSPRIYIP 371
DG R +D R Q FS + P
Sbjct: 171 VDGRVRRYDLRMGQLFSDYVGSP 193
Score = 82 (33.9 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLD--VHPFNPRIAMS 600
+ I +S D + L + +D + + + G L+ TGH Y LD + + + +S
Sbjct: 194 ITCICFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNKEYKLDCCLSERDTHV-VS 252
Query: 601 AGYDGKTIVWDIWEG 615
DGK WD+ EG
Sbjct: 253 CSEDGKVFFWDLVEG 267
Score = 45 (20.9 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 483 NIVTCSRDGSAIIW 496
++V+CS DG W
Sbjct: 249 HVVSCSEDGKVFFW 262
Score = 45 (20.9 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 13/56 (23%), Positives = 23/56 (41%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVW 610
V++ D ++ W+ +G+L +L L HP P + + G G W
Sbjct: 250 VVSCSEDGKVFFWDLVEGALALALPVGPGVVQSLTYHPTEPCLLTAMG--GSIQCW 303
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 173 (66.0 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 39/129 (30%), Positives = 67/129 (51%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
++GH N VY FD G +V++GS D +++W +ET C+ + GH+ +T
Sbjct: 590 LQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS-LTSGMELKDNI 646
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRG---HTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D +++W + G + L+G H +AVT + F+ +++SSDDGT +
Sbjct: 647 LVSGNA-DSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKN-----FVITSSDDGTVK 700
Query: 356 IWDARYSQF 364
+WD R +F
Sbjct: 701 LWDLRTGEF 709
Score = 148 (57.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 38/132 (28%), Positives = 60/132 (45%)
Query: 233 MQNIKRVRGHRNAVY-CAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDX 291
+++ K ++GH + V C F G +++GSDD +K+WS T CL + GH G +
Sbjct: 423 LKSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSS 480
Query: 292 XXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDD 351
D ++VW G I L GHT+ V + + +++S S D
Sbjct: 481 QMRDNIIISGST--DRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK-----RVVSGSRD 533
Query: 352 GTCRIWDARYSQ 363
T R+WD Q
Sbjct: 534 ATLRVWDIETGQ 545
Score = 145 (56.1 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 39/134 (29%), Positives = 60/134 (44%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
++ Q + + GH AV C +D GR V++G+ D +VK+W ET CL + +GH +
Sbjct: 541 IETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRV- 597
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D IRVW + G I L GH + + + L+S +
Sbjct: 598 -YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI-----LVSGN 651
Query: 350 DDGTCRIWDARYSQ 363
D T +IWD + Q
Sbjct: 652 ADSTVKIWDIKTGQ 665
Score = 67 (28.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 17/71 (23%), Positives = 33/71 (46%)
Query: 550 LDNRFVLAAIMDCRICVWNAADGSLVHSLTG-HTESTYVLDVHPFNPRIAMSAGYDGKTI 608
L + +++ D + +W+ G + +L G H + V + FN +++ DG
Sbjct: 642 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQ-FNKNFVITSSDDGTVK 700
Query: 609 VWDIWEGIPIR 619
+WD+ G IR
Sbjct: 701 LWDLRTGEFIR 711
Score = 44 (20.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 29/115 (25%), Positives = 48/115 (41%)
Query: 391 QSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQ 450
Q H + +G V+GS DT RVW+ N + H+ + SG E N +
Sbjct: 591 QGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT-LTGHQ-SLTSGMELKDN-IL 647
Query: 451 FSGCAVAS----RFSLADSSKEDSTP-KFKNSWFC---HDN-IVTCSRDGSAIIW 496
SG A ++ + P K +++ C + N ++T S DG+ +W
Sbjct: 648 VSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFVITSSDDGTVKLW 702
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 152 (58.6 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 51/180 (28%), Positives = 79/180 (43%)
Query: 242 HRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEG--DITDXXXXXXXXX 299
H V +FD + + TG D +KIW M YC + +G G + +
Sbjct: 109 HIAPVATMVFDSTSTLLATGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISRLQ 168
Query: 300 XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA 359
D IR+W L ++VL GH +AVT++AF+ G+ L+SS D C +W+
Sbjct: 169 LFSSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLAFTA-DGNT--LISSGRDKICMVWNL 225
Query: 360 RYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVW 419
+ + S R IP ++V + P G S Q+ G F+T S + +VW
Sbjct: 226 KTRE-SIRT-IPI-YESVEAAVLLPEQ--GDFS-QL---GVKKQGLHFLTAGSKGVLKVW 276
Score = 145 (56.1 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 40/147 (27%), Positives = 61/147 (41%)
Query: 217 RAACYAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAY 276
+A I+ P T+ +M RGH + + + + TGS DRL K+WS
Sbjct: 468 KAKAALISGPETLHAQMTE----RGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCS 523
Query: 277 CLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFS 336
L GH+ I D +++W L D + GH A+V I F
Sbjct: 524 LLGVFTGHKRGIWCVQFSPVDQILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKIIFV 583
Query: 337 PRPGSVYQLLSSSDDGTCRIWDARYSQ 363
R G+ QLLS DG ++W + ++
Sbjct: 584 SR-GT--QLLSGGSDGLLKLWTIKTNE 607
Score = 128 (50.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 57/228 (25%), Positives = 98/228 (42%)
Query: 231 QKMQNIKRVRGHRNAVYCAIFDRSG-RYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
Q +Q K++ G+ + V F G +++ ++ +K++ + T++C GH I
Sbjct: 332 QTLQLRKQLAGYNDEVLDVKFLGPGDSHIVVATNSPQLKVFELSTSHCQI-LYGHTETIL 390
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRL-PDGLPISVLRG--HTAAVTAIAFSPRPGSVYQLL 346
D IRVWR+ DG + V +G H V A++ S S ++
Sbjct: 391 ALDVFRKGLMFVSCAKDKSIRVWRMNKDGRVVCVAQGLGHAHGVGAVSCSRLKESF--VV 448
Query: 347 SSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNM--APSSSAGPQSHQIFCCAFNANG 404
+SS D T ++W+ S S + ++G A + G I A + N
Sbjct: 449 TSSQDCTIKVWNIPESLTSKA-----KAALISGPETLHAQMTERG-HDKDINSVAVSPND 502
Query: 405 TVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS 452
+ TGS D LA++W+ C P+ + V +GH+ + VQFS
Sbjct: 503 KLIATGSQDRLAKLWS-C-PDCS-------LLGVFTGHKRGIWCVQFS 541
Score = 75 (31.5 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 17/82 (20%), Positives = 38/82 (46%)
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
+ +N + S +++ + D +W+ D SL+ TGH + + P + +A S
Sbjct: 491 KDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQILATS 550
Query: 601 AGYDGKTIVWDIWEGIPIRIYE 622
+ DG +W + + ++ +E
Sbjct: 551 SA-DGTLKLWGLQDFSCLKTFE 571
Score = 54 (24.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHEN 444
F + GT ++G SD L ++W K N HE + H N
Sbjct: 582 FVSRGTQLLSGGSDGLLKLWTI-KTNECVKTLDGHEDKIWGLHTN 625
Score = 54 (24.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 16/72 (22%), Positives = 32/72 (44%)
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
RG+ + +S ++ + + D + +W D S + + GH S + ++ +S
Sbjct: 533 RGIWCVQFSPVDQILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGTQL-LS 591
Query: 601 AGYDGKTIVWDI 612
G DG +W I
Sbjct: 592 GGSDGLLKLWTI 603
Score = 51 (23.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 542 GVNMIVWS-LDNRFVLAAIMDCRICVWN 568
GV + S L FV+ + DC I VWN
Sbjct: 433 GVGAVSCSRLKESFVVTSSQDCTIKVWN 460
Score = 43 (20.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 414 TLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSG 453
T WN N+ + + I+ L HE N +Q+SG
Sbjct: 727 TFLVTWNT---NSRNCHEAQAVIETLLKHEAPDNLLQYSG 763
Score = 42 (19.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 13/62 (20%), Positives = 25/62 (40%)
Query: 401 NANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHE-----NDVNYVQFSGCA 455
N + VT SSD+ +W + Q E ++ E ++ Y++ G A
Sbjct: 625 NKQDDMVVTASSDSSITLWKDVTEIEQEEAQAKREEQIMKEQELSNLLHEKRYLKALGLA 684
Query: 456 VA 457
++
Sbjct: 685 IS 686
Score = 41 (19.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 578 LTGHTESTYVLDVHPFNPRIA-MSAGYDGKTIVW 610
L GHTE+ LDV F + +S D VW
Sbjct: 382 LYGHTETILALDV--FRKGLMFVSCAKDKSIRVW 413
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 154 (59.3 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 38/128 (29%), Positives = 60/128 (46%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYC--LASCRGHEGDITDXXX 293
I + GH VYC F +G + + DRL+ +W++ C A+ +GH G + +
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 117
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLL-SSSDDG 352
D + VW G + L+GHT+ V + + R G QL+ + SDDG
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGP--QLVCTGSDDG 174
Query: 353 TCRIWDAR 360
T ++WD R
Sbjct: 175 TVKLWDIR 182
Score = 150 (57.9 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 51/188 (27%), Positives = 83/188 (44%)
Query: 234 QNIKRVRGHRNAVY-CAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
+ +KR++GH + V C R + V TGSDD VK+W + + + + + +
Sbjct: 142 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVT 200
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
D I+VW L +RGH +VT ++ S GS Y LLS++ D
Sbjct: 201 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSE-GS-Y-LLSNAMDN 257
Query: 353 TCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSS 412
T R+WD R F+P+ R G N+ + C+++ +G+ GS+
Sbjct: 258 TVRVWDVR--PFAPK---ERCVKIFQG-NVHNFEK------NLLRCSWSPDGSKIAAGSA 305
Query: 413 DTLARVWN 420
D VW+
Sbjct: 306 DRFVYVWD 313
Score = 108 (43.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 33/155 (21%), Positives = 64/155 (41%)
Query: 235 NIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
N ++GH AV ++ G + + S D+ V +W ET + +GH +
Sbjct: 101 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPA 160
Query: 295 XXXXXXX-XXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D +++W + I + +T V A+ F+ Q++S D
Sbjct: 161 RRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSD---QIISGGIDND 216
Query: 354 CRIWDARYSQFSPRIYIPRP-SDAVAGRNMAPSSS 387
++WD R ++ + Y R +D+V G +++ S
Sbjct: 217 IKVWDLRQNKLT---YTMRGHADSVTGLSLSSEGS 248
Score = 68 (29.0 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRI 597
WS D + A D + VW+ +++ L GH S + HP P I
Sbjct: 293 WSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPII 342
Score = 61 (26.5 bits), Expect = 5.4e-08, Sum P(3) = 5.4e-08
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDI 612
+++ +D I VW+ L +++ GH +S L + + +S D VWD+
Sbjct: 208 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL-LSNAMDNTVRVWDV 264
Score = 40 (19.1 bits), Expect = 6.7e-06, Sum P(3) = 6.7e-06
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 1238 DIKPNSLPEVLESDGTNRTSSDRGADGSQRLNAQIDST 1275
D++ N L + + T ++GS L+ +D+T
Sbjct: 221 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNT 258
Score = 38 (18.4 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 409 TGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSG 453
TGS D ++W+ K + Q ++ VL+ ND + SG
Sbjct: 169 TGSDDGTVKLWDIRKKAAIQTFQNTYQ--VLAVTFNDTSDQIISG 211
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 136 (52.9 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 36/125 (28%), Positives = 56/125 (44%)
Query: 238 RVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXX 297
++ GH +V C F R +++GS D + IW + L GH ++
Sbjct: 256 KLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVVSENY 315
Query: 298 XXXXXXXXDCIIRVWRLPDGLP----ISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D RVWRL P + VLRGH A+V ++ +S + G + +++S D T
Sbjct: 316 IISSSR--DHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSKTGLI---VTASSDRT 370
Query: 354 CRIWD 358
R WD
Sbjct: 371 LRTWD 375
Score = 135 (52.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 36/127 (28%), Positives = 54/127 (42%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXX 299
R ++VYC +D +++GS DR V +W + + + L GH G +
Sbjct: 218 RATLDSVYCVQYD--DEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNL 275
Query: 300 XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA 359
D I +W + P+ V GHT V + S Y ++SSS D T R+W
Sbjct: 276 LVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVVSEN----Y-IISSSRDHTARVW-- 328
Query: 360 RYSQFSP 366
R SP
Sbjct: 329 RLDATSP 335
Score = 85 (35.0 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 551 DNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVW 610
+ +F+++ D I ++ A+ G L+ L GH + + V FN +S GYDG +W
Sbjct: 398 NGKFIVSGSSDLTIRIFEASSGKLLRMLQGHED--LIRTVR-FNDEKIVSGGYDGTVRIW 454
Query: 611 DIWEG 615
+ G
Sbjct: 455 NFNTG 459
Score = 62 (26.9 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 26/112 (23%), Positives = 41/112 (36%)
Query: 392 SHQ--IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYV 449
+HQ I C +N G V+GSSD R++ A Q HE + + ND V
Sbjct: 387 AHQRGIACAQYN--GKFIVSGSSDLTIRIFEASSGKLLRMLQ-GHEDLIRTVRFNDEKIV 443
Query: 450 Q--FSGCAVASRFSLADSS---KEDSTPKFKNSWFCHDNIVTCSRDGSAIIW 496
+ G F+ + + F H I+ C+ ++W
Sbjct: 444 SGGYDGTVRIWNFNTGEQHCVLHNSRNSRVFGLQFDHRRIIACTHSSEILVW 495
Score = 49 (22.3 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 536 ILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADG 572
+L R + D+R ++A I VWN DG
Sbjct: 464 VLHNSRNSRVFGLQFDHRRIIACTHSSEILVWNFDDG 500
Score = 45 (20.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 23/82 (28%), Positives = 35/82 (42%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN + +S ++ A D + W+ TGH + +H IA A
Sbjct: 350 VNSVQYSSKTGLIVTASSDRTLRTWDIT--------TGHC----IRIIHAHQRGIAC-AQ 396
Query: 603 YDGKTIVWDIWEGIPIRIYEIS 624
Y+GK IV + + IRI+E S
Sbjct: 397 YNGKFIVSGSSD-LTIRIFEAS 417
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 170 (64.9 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 39/125 (31%), Positives = 56/125 (44%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH V C F + Y+ TGS D+ V++WS + + GH G +
Sbjct: 420 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYL 479
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
D +++W L G LRGHT +T++ FSP V S+S D + R+WD R
Sbjct: 480 ASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLV---ASASMDNSVRVWDIR 536
Query: 361 YSQFS 365
S S
Sbjct: 537 SSHCS 541
Score = 132 (51.5 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 32/119 (26%), Positives = 49/119 (41%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXX 299
+GH V+ Y + S DR ++WS + Y L GH D+
Sbjct: 377 QGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNY 436
Query: 300 XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D +R+W G + + GH V ++AFSP G Y L S+ +D ++WD
Sbjct: 437 LATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPN-GK-Y-LASAGEDQRLKLWD 492
Score = 123 (48.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 36/136 (26%), Positives = 57/136 (41%)
Query: 236 IKRVRGHRNAVYCAIF--DRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
+K +RGH VY F D SG +++ S+D ++ W + + +GH + D
Sbjct: 331 MKVLRGHCGPVYSTRFLADSSG--LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDI 388
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D R+W P+ + GH A V + F P S Y L + S D T
Sbjct: 389 SPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKF--HPNSNY-LATGSTDKT 445
Query: 354 CRIWDARYSQFSPRIY 369
R+W + S R++
Sbjct: 446 VRLWSTQQGN-SVRLF 460
Score = 99 (39.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 541 RG-VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAM 599
RG V + +S + +++ +A D R+ +W+ A G+L L GHT++ L P + +A
Sbjct: 464 RGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVA- 522
Query: 600 SAGYDGKTIVWDI 612
SA D VWDI
Sbjct: 523 SASMDNSVRVWDI 535
Score = 57 (25.1 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 400 FNANGTVFVTGSSDTLARVWNACKPN-TDDSDQPNHE-IDVLSGHENDVNYVQFSGC 454
F+ + ++ + S D RVW+ + + +D + E + V +G ++V VQF C
Sbjct: 514 FSPDSSLVASASMDNSVRVWDIRSSHCSTPADGSSSELVGVYTGQMSNVLSVQFMAC 570
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 170 (64.9 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 38/129 (29%), Positives = 67/129 (51%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
++GH N VY FD G +V++GS D +++W +ET C+ + GH+ +T
Sbjct: 417 LQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS-LTSGMELKDNI 473
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRG---HTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D +++W + G + L+G H +AVT + F+ +++SSDDGT +
Sbjct: 474 LVSGNA-DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN-----FVITSSDDGTVK 527
Query: 356 IWDARYSQF 364
+WD + +F
Sbjct: 528 LWDLKTGEF 536
Score = 149 (57.5 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 38/133 (28%), Positives = 61/133 (45%)
Query: 232 KMQNIKRVRGHRNAVY-CAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
++++ K ++GH + V C F G +++GSDD +K+WS T CL + GH G +
Sbjct: 249 ELKSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS 306
Query: 291 XXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSD 350
D ++VW G I L GHT+ V + + +++S S
Sbjct: 307 SQMRDNIIISGST--DRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK-----RVVSGSR 359
Query: 351 DGTCRIWDARYSQ 363
D T R+WD Q
Sbjct: 360 DATLRVWDIETGQ 372
Score = 145 (56.1 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 39/134 (29%), Positives = 60/134 (44%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
++ Q + + GH AV C +D GR V++G+ D +VK+W ET CL + +GH +
Sbjct: 368 IETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRV- 424
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D IRVW + G I L GH + + + L+S +
Sbjct: 425 -YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI-----LVSGN 478
Query: 350 DDGTCRIWDARYSQ 363
D T +IWD + Q
Sbjct: 479 ADSTVKIWDIKTGQ 492
Score = 68 (29.0 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 550 LDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIV 609
L + +++ D + +W+ G + +L G + + FN +++ DG +
Sbjct: 469 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKL 528
Query: 610 WDIWEGIPIR 619
WD+ G IR
Sbjct: 529 WDLKTGEFIR 538
Score = 44 (20.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 29/115 (25%), Positives = 48/115 (41%)
Query: 391 QSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQ 450
Q H + +G V+GS DT RVW+ N + H+ + SG E N +
Sbjct: 418 QGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT-LTGHQ-SLTSGMELKDN-IL 474
Query: 451 FSGCAVAS----RFSLADSSKEDSTP-KFKNSWFC---HDN-IVTCSRDGSAIIW 496
SG A ++ + P K +++ C + N ++T S DG+ +W
Sbjct: 475 VSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 529
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 170 (64.9 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 38/129 (29%), Positives = 67/129 (51%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
++GH N VY FD G +V++GS D +++W +ET C+ + GH+ +T
Sbjct: 459 LQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS-LTSGMELKDNI 515
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRG---HTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D +++W + G + L+G H +AVT + F+ +++SSDDGT +
Sbjct: 516 LVSGNA-DSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN-----FVITSSDDGTVK 569
Query: 356 IWDARYSQF 364
+WD + +F
Sbjct: 570 LWDLKTGEF 578
Score = 149 (57.5 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 38/133 (28%), Positives = 61/133 (45%)
Query: 232 KMQNIKRVRGHRNAVY-CAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
++++ K ++GH + V C F G +++GSDD +K+WS T CL + GH G +
Sbjct: 291 ELRSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS 348
Query: 291 XXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSD 350
D ++VW G I L GHT+ V + + +++S S
Sbjct: 349 SQMRDNIIISGST--DRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK-----RVVSGSR 401
Query: 351 DGTCRIWDARYSQ 363
D T R+WD Q
Sbjct: 402 DATLRVWDIETGQ 414
Score = 145 (56.1 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 39/134 (29%), Positives = 60/134 (44%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
++ Q + + GH AV C +D GR V++G+ D +VK+W ET CL + +GH +
Sbjct: 410 IETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRV- 466
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D IRVW + G I L GH + + + L+S +
Sbjct: 467 -YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI-----LVSGN 520
Query: 350 DDGTCRIWDARYSQ 363
D T +IWD + Q
Sbjct: 521 ADSTVKIWDIKTGQ 534
Score = 69 (29.3 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 15/70 (21%), Positives = 32/70 (45%)
Query: 550 LDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIV 609
L + +++ D + +W+ G + +L G ++ + FN +++ DG +
Sbjct: 511 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKL 570
Query: 610 WDIWEGIPIR 619
WD+ G IR
Sbjct: 571 WDLKTGEFIR 580
Score = 44 (20.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 29/115 (25%), Positives = 48/115 (41%)
Query: 391 QSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQ 450
Q H + +G V+GS DT RVW+ N + H+ + SG E N +
Sbjct: 460 QGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT-LTGHQ-SLTSGMELKDN-IL 516
Query: 451 FSGCAVAS----RFSLADSSKEDSTP-KFKNSWFC---HDN-IVTCSRDGSAIIW 496
SG A ++ + P K +++ C + N ++T S DG+ +W
Sbjct: 517 VSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLW 571
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 157 (60.3 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 39/128 (30%), Positives = 60/128 (46%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYC--LASCRGHEGDITDXXX 293
I + GH VYC F +G + + DRL+ +WS+ C A+ +GH G + +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVY-GDCDNYATLKGHSGAVMELHY 118
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLL-SSSDDG 352
D + VW G + L+GHT+ V + + R G QL+ + SDDG
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRGP--QLVCTGSDDG 175
Query: 353 TCRIWDAR 360
T ++WD R
Sbjct: 176 TVKLWDIR 183
Score = 146 (56.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 50/189 (26%), Positives = 84/189 (44%)
Query: 234 QNIKRVRGHRNAVY-CAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
+ +KR++GH + V C R + V TGSDD VK+W + + + + + +
Sbjct: 143 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVT 201
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
D I+VW L +RGH +VT ++ S GS Y LLS++ D
Sbjct: 202 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSE-GS-Y-LLSNAMDN 258
Query: 353 TCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSS 412
T R+WD R F+P+ R G N+ + C+++ +G+ GS+
Sbjct: 259 TVRVWDVR--PFAPK---ERCVKIFQG-NVHNFEK------NLLRCSWSPDGSKIAAGSA 306
Query: 413 DTLARVWNA 421
D+ W++
Sbjct: 307 DSFLYPWHS 315
Score = 61 (26.5 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDI 612
+++ +D I VW+ L +++ GH +S L + + +S D VWD+
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL-LSNAMDNTVRVWDV 265
Score = 40 (19.1 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 1238 DIKPNSLPEVLESDGTNRTSSDRGADGSQRLNAQIDST 1275
D++ N L + + T ++GS L+ +D+T
Sbjct: 222 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNT 259
Score = 38 (18.4 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 409 TGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSG 453
TGS D ++W+ K + Q ++ VL+ ND + SG
Sbjct: 170 TGSDDGTVKLWDIRKKAAIQTFQNTYQ--VLAVTFNDTSDQIISG 212
Score = 38 (18.4 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 14/65 (21%), Positives = 24/65 (36%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKT 607
WS D + A D + W++ + + H S V P +SA D +
Sbjct: 294 WSPDGSKIAAGSADSFLYPWHSLSVRSLGQIPRHRLSRQEDSVKPQEGIXILSASSDKRL 353
Query: 608 IVWDI 612
+ +I
Sbjct: 354 YMGEI 358
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 152 (58.6 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 33/128 (25%), Positives = 54/128 (42%)
Query: 231 QKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
QK K GH VY F +Y+++ S+D ++WSMET L +GH + D
Sbjct: 667 QKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWD 726
Query: 291 XXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSD 350
D R+W P+ + GH + + F P ++ L + S+
Sbjct: 727 VSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHP---NINYLATGSN 783
Query: 351 DGTCRIWD 358
D + R+W+
Sbjct: 784 DKSARLWE 791
Score = 144 (55.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 34/120 (28%), Positives = 53/120 (44%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH + F + Y+ TGS+D+ ++W ++T C+ GH I
Sbjct: 761 GHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLL 820
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
D + +W L G + + GHT V ++ FS GS+ L S S D T R+WD +
Sbjct: 821 ATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFSC-DGSI--LASGSSDCTVRLWDVK 877
Score = 132 (51.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 33/129 (25%), Positives = 53/129 (41%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
++ M N+ +GH V+ F G Y T S DR ++W+ L GH D
Sbjct: 708 METMSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCN 767
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D R+W + G + + GH A + +AFSP G + L ++
Sbjct: 768 TVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSP-DGRL--LATAG 824
Query: 350 DDGTCRIWD 358
+D + +WD
Sbjct: 825 EDTSVILWD 833
Score = 83 (34.3 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 19/67 (28%), Positives = 31/67 (46%)
Query: 546 IVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDG 605
+ +S D R + A D + +W+ + G V + GHT+ Y LD + I S D
Sbjct: 811 VAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFS-CDGSILASGSSDC 869
Query: 606 KTIVWDI 612
+WD+
Sbjct: 870 TVRLWDV 876
Score = 71 (30.1 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 566 VWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIR 619
+W G V GH Y + P + R+ +AG D I+WD+ G ++
Sbjct: 789 LWEIQTGKCVRIFMGHRAPIYTVAFSP-DGRLLATAGEDTSVILWDLSTGKKVK 841
Score = 69 (29.3 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWNACKP-NTDDSDQPNHEID 437
++ F+ +G++ +GSSD R+W+ K N+ S QP+ I+
Sbjct: 850 VYSLDFSCDGSILASGSSDCTVRLWDVKKAFNSSLSTQPSSLIN 893
Score = 53 (23.7 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 1136 KNVKNLSGENNDVYSGDASCKEQ--QSGFSE--LNYYDESKCVNTT 1177
K VK + G VYS D SC SG S+ + +D K N++
Sbjct: 838 KKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWDVKKAFNSS 883
Score = 46 (21.3 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWN 420
I+ AF+ +G + T DT +W+
Sbjct: 808 IYTVAFSPDGRLLATAGEDTSVILWD 833
Score = 40 (19.1 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 1703 DIAVMLSNAESYFGRNTDLSTKIKRLSDLVTRTLSSLKAPQFHD 1746
D V L + + F N+ LST+ L + +R +LK+ F D
Sbjct: 868 DCTVRLWDVKKAF--NSSLSTQPSSLINDESRKRKTLKSKLFSD 909
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 170 (64.9 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 63/244 (25%), Positives = 96/244 (39%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
Q + + GH + V C FD+ +I+GS D+ ++IW+ T+ C++ GH +
Sbjct: 304 QQVALLEGHSSGVTCLQFDQCK--LISGSMDKTIRIWNYRTSECISILHGHTDSVL--CL 359
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
DC +++W G I+ LRGHT V ++ G V LS SDD T
Sbjct: 360 TFDSTLLVSGSADCTVKLWHFSGGKRIT-LRGHTGPVNSVRIIRDRGLV---LSGSDDST 415
Query: 354 CRIWDARYSQ----FSPRIYIPRPSDAVAGRNMAPSSSAGPQS----------HQIF--- 396
+IW + FS I P S A+A + S G H +F
Sbjct: 416 IKIWSLETNTCLHTFSAHIG-PVQSLALADSRLFSCSLDGTIKQWDIEKKKCVHTLFGHI 474
Query: 397 --CCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGC 454
A+ ++G+ D + +VW AC+ + L H V V C
Sbjct: 475 EGVWEIAADHLRLISGAHDGVVKVWEACEC-----------VHTLKNHSEPVTSVALGDC 523
Query: 455 AVAS 458
V S
Sbjct: 524 EVVS 527
Score = 113 (44.8 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 32/117 (27%), Positives = 50/117 (42%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH + V C R+ + +GS D +++W++ T +A GH +T
Sbjct: 271 GHSDGVMCLQLVRN--ILASGSYDATIRLWNLATFQQVALLEGHSSGVT--CLQFDQCKL 326
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIW 357
D IR+W IS+L GHT +V + F L+S S D T ++W
Sbjct: 327 ISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDST-----LLVSGSADCTVKLW 378
Score = 64 (27.6 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 551 DNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVW 610
D+R + + +D I W+ VH+L GH E + ++ + R+ +S +DG VW
Sbjct: 444 DSR-LFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVW--EIAADHLRL-ISGAHDGVVKVW 499
Query: 611 DIWE 614
+ E
Sbjct: 500 EACE 503
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 151 (58.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 33/127 (25%), Positives = 54/127 (42%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ + GH + C F ++T S D +W +ET + GH GD+
Sbjct: 137 RELAGHTGYLSCCRF-LDDNQIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPD 195
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D ++W + +G+ GH + + AI F P G+ + + SDD TCR+
Sbjct: 196 TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPN-GNAFA--TGSDDATCRL 252
Query: 357 WDARYSQ 363
+D R Q
Sbjct: 253 FDLRADQ 259
Score = 62 (26.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 17/70 (24%), Positives = 27/70 (38%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G+ + +S R +LA D VW+A L GH L V +A +
Sbjct: 272 GITSVAFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVA-TG 330
Query: 602 GYDGKTIVWD 611
+D +W+
Sbjct: 331 SWDSFLKIWN 340
Score = 54 (24.1 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 388 AGPQSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
AG +++ C +G TGS D+ ++WN
Sbjct: 309 AG-HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 142 (55.0 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 36/122 (29%), Positives = 59/122 (48%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ +GHR+A+ F SG+ + +GS D V +W+M+ GH+ +T
Sbjct: 12 RNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPS 71
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVL-RGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D +R+W +P SVL R HT +V ++ FS S LL++SDD + +
Sbjct: 72 AHLLASSSRDKTVRLW-VPSVKGESVLFRAHTGSVRSVCFSADGQS---LLTASDDQSIK 127
Query: 356 IW 357
+W
Sbjct: 128 LW 129
Score = 137 (53.3 bits), Expect = 8.4e-08, Sum P(3) = 8.4e-08
Identities = 42/154 (27%), Positives = 61/154 (39%)
Query: 213 APSIRAACYAIAKPSTMVQKMQ---NIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKI 269
+PS + S MV M+ R GH++AV C F S + + S D+ V++
Sbjct: 27 SPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLLASSSRDKTVRL 86
Query: 270 WSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAA 329
W R H G + D I++W + I LR H
Sbjct: 87 WVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNW 146
Query: 330 VTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQ 363
V FSP G + ++S SDD T ++WDA Q
Sbjct: 147 VRCARFSP-DGQL--MVSVSDDRTVKLWDASSRQ 177
Score = 77 (32.2 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 23/79 (29%), Positives = 42/79 (53%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLT---GHTESTYVLDVHPFNPRIAMSAGYD 604
+S D + +++ D + +W+A+ L+H+ G+ S+YV D HP + IA +A D
Sbjct: 152 FSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGY--SSYV-DFHPSSTCIA-TASSD 207
Query: 605 GKTIVWDIWEGIPIRIYEI 623
VWDI ++ Y++
Sbjct: 208 NTVRVWDIRTHTLLQHYQV 226
Score = 66 (28.3 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 18/68 (26%), Positives = 32/68 (47%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN + + +L A D + + + +G L+++L GH S + + A SAG
Sbjct: 231 VNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFA-SAG 289
Query: 603 YDGKTIVW 610
D + +VW
Sbjct: 290 SDQQVMVW 297
Score = 57 (25.1 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 30/146 (20%), Positives = 56/146 (38%)
Query: 483 NIVTCSRDGSAIIW-IPRSR-----RSHP---KAARWTQAYHLKVXXXXXXXXXXXXXXX 533
+++T S D S +W + R + R H + AR++ L V
Sbjct: 116 SLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASS 175
Query: 534 XXILPT---PRGVNMIV-WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLD 589
++ T P G + V + + + A D + VW+ +L+ H+ + L
Sbjct: 176 RQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALS 235
Query: 590 VHPFNPRIAMSAGYDGKTIVWDIWEG 615
HP + ++A D + D+ EG
Sbjct: 236 FHPSGNHL-LTASSDSTLKILDLLEG 260
Score = 53 (23.7 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 18/63 (28%), Positives = 29/63 (46%)
Query: 397 CCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGC-A 455
C F+ +G + V+ S D ++W+A S Q H G+ + V++ S C A
Sbjct: 149 CARFSPDGQLMVSVSDDRTVKLWDA------SSRQLIHTFCEPGGYSSYVDFHPSSTCIA 202
Query: 456 VAS 458
AS
Sbjct: 203 TAS 205
Score = 50 (22.7 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 400 FNANGTVFVTGSSDTLARVWN 420
F+ + T T SSD RVW+
Sbjct: 194 FHPSSTCIATASSDNTVRVWD 214
Score = 49 (22.3 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 397 CCAFNANGTVFVTGSSDTLARVWNACKPNTDDSD 430
C +F+ +G F + SD VW + N D D
Sbjct: 275 CVSFSRSGDQFASAGSDQQVMVW---RTNFDSVD 305
Score = 40 (19.1 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 1000 SVIGTSSEAHQEATEGNGNRVSYVGNNCSSVDANCGLMERR 1040
S + S Q A+ G+ +V N SVD + L ++R
Sbjct: 274 SCVSFSRSGDQFASAGSDQQVMVWRTNFDSVDYSRVLQQKR 314
Score = 40 (19.1 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 1158 QQSGFSE-LNYYDESKCVNTTDEDTT 1182
+ G+S ++++ S C+ T D T
Sbjct: 184 EPGGYSSYVDFHPSSTCIATASSDNT 209
Score = 39 (18.8 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 19/83 (22%), Positives = 35/83 (42%)
Query: 391 QSHQIFCCAFNA-----NGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHEND 445
Q +Q+ A NA +G +T SSD+ ++ + + + L GH+
Sbjct: 222 QHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRL---------LYTLHGHQGS 272
Query: 446 VNYVQFSGCAVASRFSLADSSKE 468
+ V FS +F+ A S ++
Sbjct: 273 ASCVSFSRSG--DQFASAGSDQQ 293
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 170 (64.9 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 38/129 (29%), Positives = 67/129 (51%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
++GH N VY FD G +V++GS D +++W +ET C+ + GH+ +T
Sbjct: 457 LQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS-LTSGMELKDNI 513
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRG---HTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D +++W + G + L+G H +AVT + F+ +++SSDDGT +
Sbjct: 514 LVSGNA-DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN-----FVITSSDDGTVK 567
Query: 356 IWDARYSQF 364
+WD + +F
Sbjct: 568 LWDLKTGEF 576
Score = 149 (57.5 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 38/133 (28%), Positives = 61/133 (45%)
Query: 232 KMQNIKRVRGHRNAVY-CAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
++++ K ++GH + V C F G +++GSDD +K+WS T CL + GH G +
Sbjct: 289 ELKSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS 346
Query: 291 XXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSD 350
D ++VW G I L GHT+ V + + +++S S
Sbjct: 347 SQMRDNIIISGST--DRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK-----RVVSGSR 399
Query: 351 DGTCRIWDARYSQ 363
D T R+WD Q
Sbjct: 400 DATLRVWDIETGQ 412
Score = 145 (56.1 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 39/134 (29%), Positives = 60/134 (44%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
++ Q + + GH AV C +D GR V++G+ D +VK+W ET CL + +GH +
Sbjct: 408 IETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRV- 464
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D IRVW + G I L GH + + + L+S +
Sbjct: 465 -YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI-----LVSGN 518
Query: 350 DDGTCRIWDARYSQ 363
D T +IWD + Q
Sbjct: 519 ADSTVKIWDIKTGQ 532
Score = 68 (29.0 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 550 LDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIV 609
L + +++ D + +W+ G + +L G + + FN +++ DG +
Sbjct: 509 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKL 568
Query: 610 WDIWEGIPIR 619
WD+ G IR
Sbjct: 569 WDLKTGEFIR 578
Score = 44 (20.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 29/115 (25%), Positives = 48/115 (41%)
Query: 391 QSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQ 450
Q H + +G V+GS DT RVW+ N + H+ + SG E N +
Sbjct: 458 QGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT-LTGHQ-SLTSGMELKDN-IL 514
Query: 451 FSGCAVAS----RFSLADSSKEDSTP-KFKNSWFC---HDN-IVTCSRDGSAIIW 496
SG A ++ + P K +++ C + N ++T S DG+ +W
Sbjct: 515 VSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 569
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 170 (64.9 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 38/129 (29%), Positives = 67/129 (51%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
++GH N VY FD G +V++GS D +++W +ET C+ + GH+ +T
Sbjct: 459 LQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS-LTSGMELKDNI 515
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRG---HTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D +++W + G + L+G H +AVT + F+ +++SSDDGT +
Sbjct: 516 LVSGNA-DSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN-----FVITSSDDGTVK 569
Query: 356 IWDARYSQF 364
+WD + +F
Sbjct: 570 LWDLKTGEF 578
Score = 149 (57.5 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 38/133 (28%), Positives = 61/133 (45%)
Query: 232 KMQNIKRVRGHRNAVY-CAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
++++ K ++GH + V C F G +++GSDD +K+WS T CL + GH G +
Sbjct: 291 ELKSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS 348
Query: 291 XXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSD 350
D ++VW G I L GHT+ V + + +++S S
Sbjct: 349 SQMRDNIIISGST--DRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK-----RVVSGSR 401
Query: 351 DGTCRIWDARYSQ 363
D T R+WD Q
Sbjct: 402 DATLRVWDIETGQ 414
Score = 145 (56.1 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 39/134 (29%), Positives = 60/134 (44%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
++ Q + + GH AV C +D GR V++G+ D +VK+W ET CL + +GH +
Sbjct: 410 IETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRV- 466
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D IRVW + G I L GH + + + L+S +
Sbjct: 467 -YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI-----LVSGN 520
Query: 350 DDGTCRIWDARYSQ 363
D T +IWD + Q
Sbjct: 521 ADSTVKIWDIKTGQ 534
Score = 69 (29.3 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 15/70 (21%), Positives = 32/70 (45%)
Query: 550 LDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIV 609
L + +++ D + +W+ G + +L G ++ + FN +++ DG +
Sbjct: 511 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKL 570
Query: 610 WDIWEGIPIR 619
WD+ G IR
Sbjct: 571 WDLKTGEFIR 580
Score = 44 (20.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 29/115 (25%), Positives = 48/115 (41%)
Query: 391 QSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQ 450
Q H + +G V+GS DT RVW+ N + H+ + SG E N +
Sbjct: 460 QGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT-LTGHQ-SLTSGMELKDN-IL 516
Query: 451 FSGCAVAS----RFSLADSSKEDSTP-KFKNSWFC---HDN-IVTCSRDGSAIIW 496
SG A ++ + P K +++ C + N ++T S DG+ +W
Sbjct: 517 VSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLW 571
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 128 (50.1 bits), Expect = 1.3e-08, Sum P(4) = 1.3e-08
Identities = 36/131 (27%), Positives = 59/131 (45%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXX 299
+GH+ A+ F +G+ + TGS D + +WS+ GH+ IT
Sbjct: 15 KGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLGNL 74
Query: 300 XXXXXXDCIIRVWRLPDGL-PISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D IR+W +PD S + HTA V ++ FS G L S+S+D + ++W+
Sbjct: 75 LASASRDRTIRLW-IPDKRGKSSEFKAHTAPVRSVDFSA-DGQF--LASASEDKSIKVWN 130
Query: 359 ARYSQFSPRIY 369
+F +Y
Sbjct: 131 MYRQRFLYSLY 141
Score = 106 (42.4 bits), Expect = 2.8e-06, Sum P(4) = 2.8e-06
Identities = 30/126 (23%), Positives = 50/126 (39%)
Query: 238 RVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXX 297
R GH++ + F G + + S DR +++W + + + H +
Sbjct: 55 RYVGHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADG 114
Query: 298 XXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIW 357
D I+VW + + L HT V FSP G + ++S S+D T +IW
Sbjct: 115 QFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSP-DGRL--IVSCSEDKTIKIW 171
Query: 358 DARYSQ 363
D Q
Sbjct: 172 DTTNKQ 177
Score = 75 (31.5 bits), Expect = 1.3e-08, Sum P(4) = 1.3e-08
Identities = 15/69 (21%), Positives = 33/69 (47%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
GVN + + +++ A D + + + +G L+++L GHT + + + S
Sbjct: 230 GVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSK-GGELFTSG 288
Query: 602 GYDGKTIVW 610
G D + ++W
Sbjct: 289 GADAQVLLW 297
Score = 63 (27.2 bits), Expect = 5.9e-06, Sum P(3) = 5.9e-06
Identities = 18/76 (23%), Positives = 35/76 (46%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKT 607
+S D R +++ D I +W+ + V++ + + +P IA SAG D
Sbjct: 152 FSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIA-SAGSDHTV 210
Query: 608 IVWDIWEGIPIRIYEI 623
+WDI ++ Y++
Sbjct: 211 KIWDIRVNKLLQHYQV 226
Score = 56 (24.8 bits), Expect = 1.3e-08, Sum P(4) = 1.3e-08
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 399 AFNANGTVFVTGSSDTLARVWN 420
AFN NGT + SD ++W+
Sbjct: 193 AFNPNGTCIASAGSDHTVKIWD 214
Score = 55 (24.4 bits), Expect = 1.8e-06, Sum P(4) = 1.8e-06
Identities = 14/72 (19%), Positives = 31/72 (43%)
Query: 544 NMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGY 603
N + ++ + + +A D + +W+ L+ H+ + HP + ++A
Sbjct: 190 NFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHP-SGNYLITASS 248
Query: 604 DGKTIVWDIWEG 615
DG + D+ EG
Sbjct: 249 DGTLKILDLLEG 260
Score = 54 (24.1 bits), Expect = 2.1e-08, Sum P(4) = 2.1e-08
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 392 SHQIFCCAFNANGTVFVTGSSDTLARVWN 420
+H + C F+ +G + V+ S D ++W+
Sbjct: 144 THWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Score = 49 (22.3 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 391 QSHQ--IFCCAFNANGTVFVTGSSDTLARVW 419
Q H +F +F+ G +F +G +D +W
Sbjct: 267 QGHTGPVFTVSFSKGGELFTSGGADAQVLLW 297
Score = 47 (21.6 bits), Expect = 1.3e-08, Sum P(4) = 1.3e-08
Identities = 17/61 (27%), Positives = 27/61 (44%)
Query: 1152 DASCKEQQSGFSELNYYDESKC-VNTTDEDTTPYPNHLQNGTIQPSELKEILTPVSTKLR 1210
DA ++ F ELNY D SK + D+ P+ + T P E + ++ KL
Sbjct: 291 DAQVLLWRTNFDELNYKDVSKRNLKRLHFDSPPHLLDIYPRTPHPHEGRIDTVEINPKLD 350
Query: 1211 I 1211
+
Sbjct: 351 V 351
Score = 44 (20.5 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 397 CCAFNANGTVFVTGSSDTLARV 418
C +F+ +G +T SSD ++
Sbjct: 233 CVSFHPSGNYLITASSDGTLKI 254
Score = 38 (18.4 bits), Expect = 7.5e-07, Sum P(4) = 7.5e-07
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 484 IVTCSRDGSAIIW 496
IV+CS D + IW
Sbjct: 159 IVSCSEDKTIKIW 171
Score = 38 (18.4 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 7/30 (23%), Positives = 17/30 (56%)
Query: 1437 GSWLMLSTHEEGSRYIPQLGDEVVYLRQGH 1466
G++L+ ++ + + + L ++Y QGH
Sbjct: 240 GNYLITASSDGTLKILDLLEGRLIYTLQGH 269
>DICTYBASE|DDB_G0275323 [details] [associations]
symbol:tipD "autophagy protein 16" species:44689
"Dictyostelium discoideum" [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0031154 "culmination involved in sorocarp
development" evidence=IMP] [GO:0034274 "Atg12-Atg5-Atg16 complex"
evidence=ISS] [GO:0019776 "Atg8 ligase activity" evidence=ISS]
[GO:0016236 "macroautophagy" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275323
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013923 Pfam:PF08614 OMA:LETECQE
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0031154
GO:GO:0016236 GO:GO:0034274 GO:GO:0019776 EMBL:AF019236 PIR:T08602
RefSeq:XP_643673.1 ProteinModelPortal:O15736 STRING:O15736
EnsemblProtists:DDB0215341 GeneID:8619939 KEGG:ddi:DDB_G0275323
ProtClustDB:CLSZ2729185 Uniprot:O15736
Length = 612
Score = 135 (52.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 39/123 (31%), Positives = 54/123 (43%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLAS--CRGHEGDITDXXXXXXXX 298
GH VY F S R V+TGS DR +K+W ++ YC + C D+
Sbjct: 406 GHIGKVYTGKFINSNR-VVTGSHDRTIKLWDLQKGYCTRTIFCFSSCNDLV--ILGGSGT 462
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRG-HTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIW 357
D +R W G P VL H +T+I SP + Q+L++S D T +I
Sbjct: 463 HLASGHVDHSVRFWDSNAGEPTQVLSSIHEGQITSITNSPT--NTNQILTNSRDHTLKII 520
Query: 358 DAR 360
D R
Sbjct: 521 DIR 523
Score = 117 (46.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 30/122 (24%), Positives = 48/122 (39%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
KR GH + +YC F+ G + TG D+ VK+W + + ++ G I
Sbjct: 318 KRWTGHNSEIYCMAFNSIGNLLATGGGDKCVKVWDVISGQQKSTLLGASQSIVSVSFSPN 377
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D R+W G L GH V F + ++++ S D T ++
Sbjct: 378 DESILGTSNDNSARLWNTELGRSRHTLTGHIGKVYTGKFI----NSNRVVTGSHDRTIKL 433
Query: 357 WD 358
WD
Sbjct: 434 WD 435
Score = 87 (35.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTG-HTESTYVLDVHPFNP--RIAMSAGYD 604
WS D R++ + +D IC+W+A +G V LT H + V ++P I +SA D
Sbjct: 547 WSPDGRYIASGSIDGSICIWDATNGKTVKVLTKVHNNGSSVCCCS-WSPLANIFISADKD 605
Query: 605 GKTIVWD 611
I W+
Sbjct: 606 KNIIQWE 612
Score = 46 (21.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 8/45 (17%), Positives = 18/45 (40%)
Query: 375 DAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVW 419
DA G+ + + + CC+++ +F++ D W
Sbjct: 567 DATNGKTVKVLTKVHNNGSSVCCCSWSPLANIFISADKDKNIIQW 611
Score = 42 (19.8 bits), Expect = 0.00056, Sum P(2) = 0.00055
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 596 RIAMSAGYDGKTIVWDIWEGIPIRI 620
R S DG +WD G +++
Sbjct: 552 RYIASGSIDGSICIWDATNGKTVKV 576
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 170 (64.9 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 38/129 (29%), Positives = 67/129 (51%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
++GH N VY FD G +V++GS D +++W +ET C+ + GH+ +T
Sbjct: 537 LQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS-LTSGMELKDNI 593
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRG---HTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D +++W + G + L+G H +AVT + F+ +++SSDDGT +
Sbjct: 594 LVSGNA-DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN-----FVITSSDDGTVK 647
Query: 356 IWDARYSQF 364
+WD + +F
Sbjct: 648 LWDLKTGEF 656
Score = 149 (57.5 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 38/133 (28%), Positives = 61/133 (45%)
Query: 232 KMQNIKRVRGHRNAVY-CAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
++++ K ++GH + V C F G +++GSDD +K+WS T CL + GH G +
Sbjct: 369 ELKSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS 426
Query: 291 XXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSD 350
D ++VW G I L GHT+ V + + +++S S
Sbjct: 427 SQMRDNIIISGST--DRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK-----RVVSGSR 479
Query: 351 DGTCRIWDARYSQ 363
D T R+WD Q
Sbjct: 480 DATLRVWDIETGQ 492
Score = 145 (56.1 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 39/134 (29%), Positives = 60/134 (44%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
++ Q + + GH AV C +D GR V++G+ D +VK+W ET CL + +GH +
Sbjct: 488 IETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRV- 544
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D IRVW + G I L GH + + + L+S +
Sbjct: 545 -YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI-----LVSGN 598
Query: 350 DDGTCRIWDARYSQ 363
D T +IWD + Q
Sbjct: 599 ADSTVKIWDIKTGQ 612
Score = 68 (29.0 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 550 LDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIV 609
L + +++ D + +W+ G + +L G + + FN +++ DG +
Sbjct: 589 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKL 648
Query: 610 WDIWEGIPIR 619
WD+ G IR
Sbjct: 649 WDLKTGEFIR 658
Score = 44 (20.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 29/115 (25%), Positives = 48/115 (41%)
Query: 391 QSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQ 450
Q H + +G V+GS DT RVW+ N + H+ + SG E N +
Sbjct: 538 QGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT-LTGHQ-SLTSGMELKDN-IL 594
Query: 451 FSGCAVAS----RFSLADSSKEDSTP-KFKNSWFC---HDN-IVTCSRDGSAIIW 496
SG A ++ + P K +++ C + N ++T S DG+ +W
Sbjct: 595 VSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 649
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 170 (64.9 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 38/129 (29%), Positives = 67/129 (51%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
++GH N VY FD G +V++GS D +++W +ET C+ + GH+ +T
Sbjct: 542 LQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS-LTSGMELKDNI 598
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRG---HTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D +++W + G + L+G H +AVT + F+ +++SSDDGT +
Sbjct: 599 LVSGNA-DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN-----FVITSSDDGTVK 652
Query: 356 IWDARYSQF 364
+WD + +F
Sbjct: 653 LWDLKTGEF 661
Score = 149 (57.5 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 38/133 (28%), Positives = 61/133 (45%)
Query: 232 KMQNIKRVRGHRNAVY-CAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
++++ K ++GH + V C F G +++GSDD +K+WS T CL + GH G +
Sbjct: 374 ELKSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS 431
Query: 291 XXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSD 350
D ++VW G I L GHT+ V + + +++S S
Sbjct: 432 SQMRDNIIISGST--DRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK-----RVVSGSR 484
Query: 351 DGTCRIWDARYSQ 363
D T R+WD Q
Sbjct: 485 DATLRVWDIETGQ 497
Score = 145 (56.1 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 39/134 (29%), Positives = 60/134 (44%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
++ Q + + GH AV C +D GR V++G+ D +VK+W ET CL + +GH +
Sbjct: 493 IETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRV- 549
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D IRVW + G I L GH + + + L+S +
Sbjct: 550 -YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI-----LVSGN 603
Query: 350 DDGTCRIWDARYSQ 363
D T +IWD + Q
Sbjct: 604 ADSTVKIWDIKTGQ 617
Score = 68 (29.0 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 550 LDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIV 609
L + +++ D + +W+ G + +L G + + FN +++ DG +
Sbjct: 594 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKL 653
Query: 610 WDIWEGIPIR 619
WD+ G IR
Sbjct: 654 WDLKTGEFIR 663
Score = 44 (20.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 29/115 (25%), Positives = 48/115 (41%)
Query: 391 QSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQ 450
Q H + +G V+GS DT RVW+ N + H+ + SG E N +
Sbjct: 543 QGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT-LTGHQ-SLTSGMELKDN-IL 599
Query: 451 FSGCAVAS----RFSLADSSKEDSTP-KFKNSWFC---HDN-IVTCSRDGSAIIW 496
SG A ++ + P K +++ C + N ++T S DG+ +W
Sbjct: 600 VSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 654
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 145 (56.1 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 59/226 (26%), Positives = 88/226 (38%)
Query: 230 VQKMQNIKRVRGHRNAVY-CAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDI 288
V+ + IK++ H + V C R +I+GSDD K+W M + + + I
Sbjct: 125 VETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPD-KYQI 183
Query: 289 TDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSS 348
T D ++VW L G L GH +T ++ SP GS Y L +
Sbjct: 184 TAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSP-DGS-YLLTNG 241
Query: 349 SDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSH---QIFCCAFNANGT 405
D+ C +WD R P Y P+ N G Q + + C+++ +GT
Sbjct: 242 MDNKLC-VWDMR-----P--YAPQ--------NRCVKIFEGHQHNFEKNLLKCSWSPDGT 285
Query: 406 VFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQF 451
GSSD + +W+ T I L GH VN F
Sbjct: 286 KVTAGSSDRMVHIWDTTSRRT---------IYKLPGHTGSVNECVF 322
Score = 141 (54.7 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 35/127 (27%), Positives = 58/127 (45%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYC--LASCRGHEGDITDXXX 293
I + GH +AVY F+ +G + +GS DR + +W + C +GH+ I D
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVH-GDCKNFMVLKGHKNAILDLHW 104
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D +R W + G I + H++ V + + R + ++S SDDGT
Sbjct: 105 TSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPL--IISGSDDGT 162
Query: 354 CRIWDAR 360
++WD R
Sbjct: 163 AKLWDMR 169
Score = 99 (39.9 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 28/155 (18%), Positives = 61/155 (39%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
+N ++GH+NA+ + G +++ S D+ V+ W +ET + H +
Sbjct: 87 KNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCP 146
Query: 294 XXXXX-XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
D ++W + I +TA++FS ++ + D
Sbjct: 147 TRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDAADKIF---TGGVDN 202
Query: 353 TCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSS 387
++WD R + + + + D + G +++P S
Sbjct: 203 DVKVWDLRKGEAT--MTLEGHQDTITGMSLSPDGS 235
Score = 72 (30.4 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 16/50 (32%), Positives = 21/50 (42%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRI 597
WS D V A D + +W+ ++ L GHT S HP P I
Sbjct: 280 WSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPII 329
Score = 66 (28.3 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 560 MDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWEGIP-- 617
+D + VW+ G +L GH ++ + + P + ++ G D K VWD+ P
Sbjct: 200 VDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYL-LTNGMDNKLCVWDMRPYAPQN 258
Query: 618 --IRIYE 622
++I+E
Sbjct: 259 RCVKIFE 265
Score = 45 (20.9 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 549 SLDNRFVLAAIMDCRICVWN 568
S D ++L MD ++CVW+
Sbjct: 231 SPDGSYLLTNGMDNKLCVWD 250
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 146 (56.5 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 37/117 (31%), Positives = 58/117 (49%)
Query: 242 HRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXX 301
H N V CA F GR +++ SDD+ VK+W + C+ S H G +T
Sbjct: 175 HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVA 234
Query: 302 XXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D ++VW + + + H+AAV A++F P G+ Y L+++S D T +I D
Sbjct: 235 AAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPS-GN-Y-LVTASSDSTLKILD 288
Score = 131 (51.2 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 34/129 (26%), Positives = 59/129 (45%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ +GHR+AV C F + + + +GS D + +W M+ GH+ +T
Sbjct: 44 RHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPS 103
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPIS-VLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D +R+W +P+ S V R HTA V ++ F G + +++SDD T +
Sbjct: 104 GHLLASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVHFCS-DGQSF--VTASDDKTIK 159
Query: 356 IWDARYSQF 364
+W +F
Sbjct: 160 VWSTHRQKF 168
Score = 88 (36.0 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKT 607
+S D R +++A D + +W+ VHS H +D HP +A +AG D
Sbjct: 184 FSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVA-AAGMDNTV 242
Query: 608 IVWDI 612
VWD+
Sbjct: 243 KVWDV 247
Score = 64 (27.6 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 23/96 (23%), Positives = 40/96 (41%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWE 614
V AA MD + VW+ L+ H+ + L HP + ++A D + D+ E
Sbjct: 233 VAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHP-SGNYLVTASSDSTLKILDLME 291
Query: 615 GIPIRIYEISRFRDGASIILSDDVGQLYILNTGQGE 650
G +Y + + A+ + G+ Y + G E
Sbjct: 292 GR--LLYTLHGHQGPATTVAFSRTGE-YFASGGSDE 324
Score = 54 (24.1 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN + + +++ A D + + + +G L+++L GH + A S G
Sbjct: 263 VNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFA-SGG 321
Query: 603 YDGKTIVW 610
D + +VW
Sbjct: 322 SDEQVMVW 329
Score = 51 (23.0 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 18/65 (27%), Positives = 28/65 (43%)
Query: 397 CCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHE-IDVLSGHENDVNYVQF--SG 453
C F+ +G + V+ S D ++W D+ + E + H V YV F SG
Sbjct: 181 CAKFSPDGRLIVSASDDKTVKLW----------DKTSRECVHSYCEHGGFVTYVDFHPSG 230
Query: 454 CAVAS 458
VA+
Sbjct: 231 TCVAA 235
Score = 50 (22.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 399 AFNANGTVFVTGSSDTLARVWNACKPNTDDSD 430
AF+ G F +G SD VW K N D D
Sbjct: 309 AFSRTGEYFASGGSDEQVMVW---KSNFDVID 337
Score = 40 (19.1 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 399 AFNANGTVFVTGSSDTLARV 418
+F+ +G VT SSD+ ++
Sbjct: 267 SFHPSGNYLVTASSDSTLKI 286
Score = 39 (18.8 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 29/122 (23%), Positives = 51/122 (41%)
Query: 1404 TVGLRSTRNRRT-SYLFCDSSPIDRRKTHQSLRKGSWLMLSTHEEGSRYIPQLGDEVVYL 1462
TV + R R + S+ ++ H S G++L+ ++ + + + + ++Y
Sbjct: 241 TVKVWDVRTHRLLQHYQLHSAAVNALSFHPS---GNYLVTASSDSTLKILDLMEGRLLYT 297
Query: 1463 RQGHQ------------EYINYSGSRE-VGPWITVKGNIRAVEFCKVESLEY--AT-ASG 1506
GHQ EY GS E V W K N +++ +V ++ AT AS
Sbjct: 298 LHGHQGPATTVAFSRTGEYFASGGSDEQVMVW---KSNFDVIDYGEVLRVQRPPATLASS 354
Query: 1507 SG 1508
SG
Sbjct: 355 SG 356
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 164 (62.8 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 38/118 (32%), Positives = 55/118 (46%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH + V C F + YV TGS DR V++W T + GH+G ++
Sbjct: 532 GHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYL 591
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D I +W L +G ++ L HT+ VT I FS R G+V L ++ D +WD
Sbjct: 592 ASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFS-RDGTV--LAAAGLDNNLTLWD 646
Score = 134 (52.2 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 32/122 (26%), Positives = 52/122 (42%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ + GH VY F +++ S+D +++WS+ T C+ + RGH + D
Sbjct: 444 RSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPH 503
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D R+W + V GH + V + F P S Y + + S D T R+
Sbjct: 504 GYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQF--HPNSNY-VATGSSDRTVRL 560
Query: 357 WD 358
WD
Sbjct: 561 WD 562
Score = 97 (39.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 58/239 (24%), Positives = 89/239 (37%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+ H+ V CA + G D V+IWS+ A L + + + D
Sbjct: 374 LNSHQG-VTCAEISDDSTMLACGFGDSSVRIWSLTPAK-LRTLK--DAD--------SLR 421
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D +R+ G L GHT V AF+P + LLS S+D T R+W
Sbjct: 422 ELDKESADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPE---MNLLLSCSEDSTIRLWS 478
Query: 359 -------ARYS---------QFSPRIY--IPRPSDAVAGRNMAPSSSAGPQ---SH--QI 395
Y +F+P Y + D A R A S+ + H +
Sbjct: 479 LLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTA-RLWATDSNQALRVFVGHLSDV 537
Query: 396 FCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGC 454
C F+ N TGSSD R+W+ + + +++GH+ V+ + FS C
Sbjct: 538 DCVQFHPNSNYVATGSSDRTVRLWD---------NMTGQSVRLMTGHKGSVSSLAFSAC 587
Score = 89 (36.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 20/69 (28%), Positives = 36/69 (52%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V+ + +S R++ + +D I +W+ ++GSLV +L HT ST + + +AG
Sbjct: 579 VSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHT-STVTTITFSRDGTVLAAAG 637
Query: 603 YDGKTIVWD 611
D +WD
Sbjct: 638 LDNNLTLWD 646
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 171 (65.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 40/137 (29%), Positives = 69/137 (50%)
Query: 231 QKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
++ + + ++GH N VY FD G +V++GS D +++W +ET C + GH+ +T
Sbjct: 1143 ERQECLHTLQGHTNRVYSLQFD--GLHVVSGSLDTSIRVWDVETGNCKHTLMGHQS-LTS 1199
Query: 291 XXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRG---HTAAVTAIAFSPRPGSVYQLLS 347
D ++VW + G + L G H +AVT + F+ R +++
Sbjct: 1200 GMELRQNILVSGNA-DSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSR-----FVVT 1253
Query: 348 SSDDGTCRIWDARYSQF 364
SSDDGT ++WD + F
Sbjct: 1254 SSDDGTVKLWDVKTGDF 1270
Score = 154 (59.3 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 38/123 (30%), Positives = 59/123 (47%)
Query: 237 KRVRGHRNAVY-CAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
K ++GH + V C F SG +++GSDD +K+WS CL + GH G +
Sbjct: 988 KVLKGHDDHVITCLQF--SGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSG 1045
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D ++VW + G + L+GHT+ V + GS +++S S D T R
Sbjct: 1046 NIIISGST--DRTLKVWDMDSGACVHTLQGHTSTVRCMHLH---GS--KVVSGSRDATLR 1098
Query: 356 IWD 358
+WD
Sbjct: 1099 VWD 1101
Score = 143 (55.4 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 67/286 (23%), Positives = 115/286 (40%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
++ + GH V+ + SG +I+GS DR +K+W M++ C+ + +GH +
Sbjct: 1028 LRTLVGHTGGVWSS--QMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVR--CMHL 1083
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D +RVW + G + VL GH AAV + + G + ++S + D +
Sbjct: 1084 HGSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYD---GKL--IVSGAYDYMVK 1138
Query: 356 IWDARYSQ-------FSPRIY-IPRPSDAVAGRNMAPSS-----SAGP-----QSHQIFC 397
IW + + R+Y + V ++ S G HQ
Sbjct: 1139 IWHPERQECLHTLQGHTNRVYSLQFDGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLT 1198
Query: 398 CAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSG---HENDVNYVQFSGC 454
+ V+G++D+ +VW+ T + LSG H + V +QF+
Sbjct: 1199 SGMELRQNILVSGNADSTVKVWDI---TTGQC------LQTLSGPNKHHSAVTCLQFN-- 1247
Query: 455 AVASRFSLADSSKEDSTPKF---KNSWFCHDNIVTCSRDGSA-IIW 496
SRF + +S +D T K K F N+V GS ++W
Sbjct: 1248 ---SRFVV--TSSDDGTVKLWDVKTGDFIR-NLVALDSGGSGGVVW 1287
Score = 75 (31.5 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 17/70 (24%), Positives = 32/70 (45%)
Query: 550 LDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIV 609
L +++ D + VW+ G + +L+G + + FN R +++ DG +
Sbjct: 1203 LRQNILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSRFVVTSSDDGTVKL 1262
Query: 610 WDIWEGIPIR 619
WD+ G IR
Sbjct: 1263 WDVKTGDFIR 1272
Score = 41 (19.5 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 7/28 (25%), Positives = 16/28 (57%)
Query: 551 DNRFVLAAIMDCRICVWNAADGSLVHSL 578
++RFV+ + D + +W+ G + +L
Sbjct: 1247 NSRFVVTSSDDGTVKLWDVKTGDFIRNL 1274
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 160 (61.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 67/265 (25%), Positives = 110/265 (41%)
Query: 173 KGQNEIDHPPAHMRWPHMYADQV-RGLGLREIGGG---FTR--HHRAPSIRAACYAIAKP 226
+ Q EI+H A R AD + R +++ G TR H +I A+C A
Sbjct: 72 ESQREINHG-APTRDKRQAADWIPRPPETQKLTGHRLPITRVIFHPLWTIMASCSEDATI 130
Query: 227 STMVQKMQNIKR-VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAY-CLASCRGH 284
+ ++R ++GH +AV D +G+ +++ S D +K+W Y CL S +GH
Sbjct: 131 KVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGH 190
Query: 285 EGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQ 344
E ++ D I+ W + G + RGH V I S G+++
Sbjct: 191 EHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRIS-NDGTLFA 249
Query: 345 LLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANG 404
S+S D T +W ++ S ++ + AV AP ++ + Q N
Sbjct: 250 --SASLDQTVTVWS--FATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQ----QPEGNS 301
Query: 405 T-VFVTGSSDTLARVWNACKPNTDD 428
T + +GS D + WN NT D
Sbjct: 302 THILFSGSRDRSIKAWNI---NTGD 323
Score = 54 (24.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 561 DCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI-VWDI 612
D I WN G ++ +L H L HP + A D KT+ VW++
Sbjct: 311 DRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVA--DDKTLRVWEL 361
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 151 (58.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 33/127 (25%), Positives = 54/127 (42%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ + GH + C F ++T S D +W +ET + GH GD+
Sbjct: 137 RELAGHTGYLSCCRF-LDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D ++W + +G+ GH + + AI F P G+ + + SDD TCR+
Sbjct: 196 TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPN-GNAFA--TGSDDATCRL 252
Query: 357 WDARYSQ 363
+D R Q
Sbjct: 253 FDLRADQ 259
Score = 60 (26.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 17/70 (24%), Positives = 27/70 (38%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G+ + +S R +LA D VW+A L GH L V +A +
Sbjct: 272 GITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVA-TG 330
Query: 602 GYDGKTIVWD 611
+D +W+
Sbjct: 331 SWDSFLKIWN 340
Score = 58 (25.5 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 399 AFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNY--VQFSGCAV 456
+F+ +G + + G D VW+A K +D+ VL+GH+N V+ V G AV
Sbjct: 277 SFSKSGRLLLAGYDDFNCNVWDALK-----ADRAG----VLAGHDNRVSCLGVTDDGMAV 327
Query: 457 AS 458
A+
Sbjct: 328 AT 329
Score = 54 (24.1 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 388 AGPQSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
AG +++ C +G TGS D+ ++WN
Sbjct: 309 AG-HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 151 (58.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 33/127 (25%), Positives = 54/127 (42%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ + GH + C F ++T S D +W +ET + GH GD+
Sbjct: 137 RELAGHTGYLSCCRF-LDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D ++W + +G+ GH + + AI F P G+ + + SDD TCR+
Sbjct: 196 TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPN-GNAFA--TGSDDATCRL 252
Query: 357 WDARYSQ 363
+D R Q
Sbjct: 253 FDLRADQ 259
Score = 60 (26.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 17/70 (24%), Positives = 27/70 (38%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G+ + +S R +LA D VW+A L GH L V +A +
Sbjct: 272 GITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVA-TG 330
Query: 602 GYDGKTIVWD 611
+D +W+
Sbjct: 331 SWDSFLKIWN 340
Score = 58 (25.5 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 399 AFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNY--VQFSGCAV 456
+F+ +G + + G D VW+A K +D+ VL+GH+N V+ V G AV
Sbjct: 277 SFSKSGRLLLAGYDDFNCNVWDALK-----ADRAG----VLAGHDNRVSCLGVTDDGMAV 327
Query: 457 AS 458
A+
Sbjct: 328 AT 329
Score = 54 (24.1 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 388 AGPQSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
AG +++ C +G TGS D+ ++WN
Sbjct: 309 AG-HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 151 (58.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 33/127 (25%), Positives = 54/127 (42%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ + GH + C F ++T S D +W +ET + GH GD+
Sbjct: 137 RELAGHTGYLSCCRF-LDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D ++W + +G+ GH + + AI F P G+ + + SDD TCR+
Sbjct: 196 TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPN-GNAFA--TGSDDATCRL 252
Query: 357 WDARYSQ 363
+D R Q
Sbjct: 253 FDLRADQ 259
Score = 60 (26.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 17/70 (24%), Positives = 27/70 (38%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G+ + +S R +LA D VW+A L GH L V +A +
Sbjct: 272 GITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVA-TG 330
Query: 602 GYDGKTIVWD 611
+D +W+
Sbjct: 331 SWDSFLKIWN 340
Score = 58 (25.5 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 399 AFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNY--VQFSGCAV 456
+F+ +G + + G D VW+A K +D+ VL+GH+N V+ V G AV
Sbjct: 277 SFSKSGRLLLAGYDDFNCNVWDALK-----ADRAG----VLAGHDNRVSCLGVTDDGMAV 327
Query: 457 AS 458
A+
Sbjct: 328 AT 329
Score = 54 (24.1 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 388 AGPQSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
AG +++ C +G TGS D+ ++WN
Sbjct: 309 AG-HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 151 (58.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 33/127 (25%), Positives = 54/127 (42%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ + GH + C F ++T S D +W +ET + GH GD+
Sbjct: 137 RELAGHTGYLSCCRF-LDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D ++W + +G+ GH + + AI F P G+ + + SDD TCR+
Sbjct: 196 TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPN-GNAFA--TGSDDATCRL 252
Query: 357 WDARYSQ 363
+D R Q
Sbjct: 253 FDLRADQ 259
Score = 60 (26.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 17/70 (24%), Positives = 27/70 (38%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G+ + +S R +LA D VW+A L GH L V +A +
Sbjct: 272 GITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVA-TG 330
Query: 602 GYDGKTIVWD 611
+D +W+
Sbjct: 331 SWDSFLKIWN 340
Score = 58 (25.5 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 399 AFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNY--VQFSGCAV 456
+F+ +G + + G D VW+A K +D+ VL+GH+N V+ V G AV
Sbjct: 277 SFSKSGRLLLAGYDDFNCNVWDALK-----ADRAG----VLAGHDNRVSCLGVTDDGMAV 327
Query: 457 AS 458
A+
Sbjct: 328 AT 329
Score = 54 (24.1 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 388 AGPQSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
AG +++ C +G TGS D+ ++WN
Sbjct: 309 AG-HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 151 (58.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 33/127 (25%), Positives = 54/127 (42%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ + GH + C F ++T S D +W +ET + GH GD+
Sbjct: 137 RELAGHTGYLSCCRF-LDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D ++W + +G+ GH + + AI F P G+ + + SDD TCR+
Sbjct: 196 TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPN-GNAFA--TGSDDATCRL 252
Query: 357 WDARYSQ 363
+D R Q
Sbjct: 253 FDLRADQ 259
Score = 60 (26.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 17/70 (24%), Positives = 27/70 (38%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G+ + +S R +LA D VW+A L GH L V +A +
Sbjct: 272 GITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVA-TG 330
Query: 602 GYDGKTIVWD 611
+D +W+
Sbjct: 331 SWDSFLKIWN 340
Score = 58 (25.5 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 399 AFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNY--VQFSGCAV 456
+F+ +G + + G D VW+A K +D+ VL+GH+N V+ V G AV
Sbjct: 277 SFSKSGRLLLAGYDDFNCNVWDALK-----ADRAG----VLAGHDNRVSCLGVTDDGMAV 327
Query: 457 AS 458
A+
Sbjct: 328 AT 329
Score = 54 (24.1 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 388 AGPQSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
AG +++ C +G TGS D+ ++WN
Sbjct: 309 AG-HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
>WB|WBGene00001679 [details] [associations]
symbol:gpb-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0040013 "negative
regulation of locomotion" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0009792 GO:GO:0000132
GO:GO:0035046 GO:GO:0018991 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0040013 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0004871
GO:GO:0046662 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 OMA:CMLWDIE
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X17497 EMBL:AF291846
EMBL:Z49127 PIR:S09591 PIR:T20830 RefSeq:NP_001254312.1
UniGene:Cel.6600 ProteinModelPortal:P17343 SMR:P17343 STRING:P17343
PaxDb:P17343 PRIDE:P17343 EnsemblMetazoa:F13D12.7a.1
EnsemblMetazoa:F13D12.7a.2 EnsemblMetazoa:F13D12.7a.3 GeneID:174803
KEGG:cel:CELE_F13D12.7 UCSC:F13D12.7.1 CTD:174803
WormBase:F13D12.7a InParanoid:P17343 KO:K07972 NextBio:885576
ArrayExpress:P17343 Uniprot:P17343
Length = 340
Score = 156 (60.0 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 34/127 (26%), Positives = 55/127 (43%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ + GH + C F ++T S D +W +ET + GH GD+
Sbjct: 137 RELPGHTGYLSCCRF-LDDNQIVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLSLSPD 195
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D ++W + DG+ GH + + A+AF P G+ + + SDD TCR+
Sbjct: 196 FRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPS-GNAFA--TGSDDATCRL 252
Query: 357 WDARYSQ 363
+D R Q
Sbjct: 253 FDIRADQ 259
Score = 54 (24.1 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 388 AGPQSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
AG +++ C +G TGS D+ ++WN
Sbjct: 309 AG-HDNRVSCLGVTEDGMAVCTGSWDSFLKIWN 340
Score = 48 (22.0 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 14/70 (20%), Positives = 25/70 (35%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G+ + +S R + A D VW++ L GH L V + +
Sbjct: 272 GITSVAFSKSGRLLFAGYDDFNCNVWDSMRQERAGVLAGHDNRVSCLGVTEDGMAVC-TG 330
Query: 602 GYDGKTIVWD 611
+D +W+
Sbjct: 331 SWDSFLKIWN 340
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 142 (55.0 bits), Expect = 2.3e-08, Sum P(4) = 2.3e-08
Identities = 33/128 (25%), Positives = 61/128 (47%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ +GH++ + CA F+ + + + TGS D+ + IW++ GH IT
Sbjct: 12 RHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPS 71
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D +R+W +V + HTA+V ++ FS R G +L+++SDD + ++
Sbjct: 72 GSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFS-RDGQ--RLVTASDDKSVKV 128
Query: 357 WDARYSQF 364
W +F
Sbjct: 129 WGVERKKF 136
Score = 134 (52.2 bits), Expect = 4.7e-05, Sum P(3) = 4.7e-05
Identities = 35/129 (27%), Positives = 55/129 (42%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
V++ + + + H N V CA F GR + + DDR V++W + C+ + G T
Sbjct: 131 VERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSAT 190
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D I++W + I + H A V +F P G+ Y L+S S
Sbjct: 191 FVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPS-GN-Y-LISGS 247
Query: 350 DDGTCRIWD 358
D T +I D
Sbjct: 248 SDSTIKILD 256
Score = 119 (46.9 bits), Expect = 7.3e-05, Sum P(3) = 7.3e-05
Identities = 31/121 (25%), Positives = 51/121 (42%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXX 299
+ H +V F R G+ ++T SDD+ VK+W +E L S H +
Sbjct: 99 KAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRL 158
Query: 300 XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA 359
D +R+W I++ + + T + F+ G+ + SS D T +IWD
Sbjct: 159 IASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSS-GTC--IASSGADNTIKIWDI 215
Query: 360 R 360
R
Sbjct: 216 R 216
Score = 63 (27.2 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 18/76 (23%), Positives = 35/76 (46%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKT 607
+S D R + + D + +W+ + ++ T + S +D + IA S+G D
Sbjct: 152 FSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIA-SSGADNTI 210
Query: 608 IVWDIWEGIPIRIYEI 623
+WDI I+ Y++
Sbjct: 211 KIWDIRTNKLIQHYKV 226
Score = 61 (26.5 bits), Expect = 2.3e-08, Sum P(4) = 2.3e-08
Identities = 15/69 (21%), Positives = 30/69 (43%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
GVN + ++++ D I + + +G L+++L GH + A S
Sbjct: 230 GVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFA-SG 288
Query: 602 GYDGKTIVW 610
G D + ++W
Sbjct: 289 GADSQVLMW 297
Score = 52 (23.4 bits), Expect = 2.3e-08, Sum P(4) = 2.3e-08
Identities = 25/107 (23%), Positives = 46/107 (42%)
Query: 387 SAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHE-IDVLSGHEND 445
S ++ + C F+ +G + + D R+W D +H+ I++ + +
Sbjct: 139 SLNRHTNWVRCARFSPDGRLIASCGDDRTVRLW----------DTSSHQCINIFTDYGGS 188
Query: 446 VNYVQF--SGCAVASRFSLADSSKE--D-STPKFKNSWFCHDNIVTC 487
+V F SG +AS S AD++ + D T K + H+ V C
Sbjct: 189 ATFVDFNSSGTCIAS--SGADNTIKIWDIRTNKLIQHYKVHNAGVNC 233
Score = 48 (22.0 bits), Expect = 2.3e-08, Sum P(4) = 2.3e-08
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 1245 PEVLESDGTNRTSSD-RGADGSQRLNAQIDSTSEHDPLGSHSHSHD 1289
P+V+E +++D R DG+ AQ S + P +H+ + +
Sbjct: 356 PQVVEVGRVVFSTTDARNYDGASSSRAQFTSGMDSGPFRTHTQARE 401
Score = 48 (22.0 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 397 CCAFNANGTVFVTGSSDTLARV 418
C +F+ +G ++GSSD+ ++
Sbjct: 233 CFSFHPSGNYLISGSSDSTIKI 254
Score = 47 (21.6 bits), Expect = 6.7e-06, Sum P(3) = 6.7e-06
Identities = 14/52 (26%), Positives = 25/52 (48%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDV 446
+ F+ +G +F +G +D+ +W K N D N+ ++LS H V
Sbjct: 273 VLTVTFSRDGDLFASGGADSQVLMW---KTNFDSL---NYR-ELLSKHSKRV 317
Score = 46 (21.3 bits), Expect = 8.4e-06, Sum P(3) = 8.4e-06
Identities = 25/110 (22%), Positives = 41/110 (37%)
Query: 561 DCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIRI 620
D I +W+ L+ H HP + +S D + D+ EG I
Sbjct: 207 DNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHP-SGNYLISGSSDSTIKILDLLEGR--LI 263
Query: 621 YEISRFRDGA-SIILSDDVGQLYILNTGQGESQKDAKYDQFFLGDYRPLV 669
Y + + ++ S D G L+ +G +SQ F +YR L+
Sbjct: 264 YTLHGHKGPVLTVTFSRD-GDLFA--SGGADSQVLMWKTNFDSLNYRELL 310
Score = 38 (18.4 bits), Expect = 2.1e-07, Sum P(4) = 2.1e-07
Identities = 38/160 (23%), Positives = 60/160 (37%)
Query: 1261 GADGSQRL--NAQIDSTSEHDPLGSHSH--SHDP----LGSHSHSHSRK--MFNVVYRRS 1310
GAD SQ L DS + + L HS + DP + + SH R V
Sbjct: 289 GAD-SQVLMWKTNFDSLNYRELLSKHSKRVTPDPPPHLMDIYPRSHHRHHPQNGTVEINP 347
Query: 1311 KTNRDRTNSEG-DGGGVGESTLNANNNNFHESATDGSRRTRSMGLKTTTCDPDNVSSNLR 1369
+ T+ + + G V ST +A N DG+ +R+ P + R
Sbjct: 348 VADTQSTDPQVVEVGRVVFSTTDARNY-------DGASSSRAQFTSGMDSGPFRTHTQAR 400
Query: 1370 LEQHNQPEDMYSGHNRSTSRCQLPHEEWGSSSKMTVGLRS 1409
E+ E+ ++G ++ P E G S +T L +
Sbjct: 401 EEEDENQEERFAGGMTAS-----PAERSGIPSSLTSTLEN 435
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 152 (58.6 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 33/127 (25%), Positives = 54/127 (42%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ + GH + C F ++T S D +W +ET + GH GD+
Sbjct: 137 RELAGHTGYLSCCRF-LDDNQIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPD 195
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D ++W + +G+ GH + + AI F P G+ + + SDD TCR+
Sbjct: 196 TRLFVSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPN-GNAFA--TGSDDATCRL 252
Query: 357 WDARYSQ 363
+D R Q
Sbjct: 253 FDLRADQ 259
Score = 58 (25.5 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 16/70 (22%), Positives = 26/70 (37%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G+ + +S R +LA D VW+ L GH L V +A +
Sbjct: 272 GITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDNRVSCLGVTDDGMAVA-TG 330
Query: 602 GYDGKTIVWD 611
+D +W+
Sbjct: 331 SWDSFLKIWN 340
Score = 54 (24.1 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 388 AGPQSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
AG +++ C +G TGS D+ ++WN
Sbjct: 309 AG-HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 163 (62.4 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 37/120 (30%), Positives = 56/120 (46%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH V C F + Y+ TGS D+ V++WS + + GH G +
Sbjct: 424 GHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYL 483
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
D +++W L G LRGHT +T++ FSP S+ + S+S D + R+WD R
Sbjct: 484 ASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSP-DSSL--IASASMDNSVRVWDIR 540
Score = 119 (46.9 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 35/136 (25%), Positives = 56/136 (41%)
Query: 236 IKRVRGHRNAVYCAIF--DRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
+K +RGH VY F D SG +++ S+D ++ W + + +GH + D
Sbjct: 335 MKILRGHCGPVYSTRFLSDSSG--LLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDI 392
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D R+W P+ + GH V + F P S Y L + S D T
Sbjct: 393 SPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKF--HPNSNY-LATGSTDKT 449
Query: 354 CRIWDARYSQFSPRIY 369
R+W + S R++
Sbjct: 450 VRLWSTQQGN-SVRLF 464
Score = 100 (40.3 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 541 RG-VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAM 599
RG V + +S + +++ +A D R+ +W+ A G+L L GHT++ L P + IA
Sbjct: 468 RGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIA- 526
Query: 600 SAGYDGKTIVWDI 612
SA D VWDI
Sbjct: 527 SASMDNSVRVWDI 539
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 144 (55.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 242 HRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXX 301
H N V CA F GR +++ SDD+ VK+W + C+ S H G +T
Sbjct: 144 HINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIA 203
Query: 302 XXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D ++VW + + + H+AAV ++F P G+ Y L+++S D T +I D
Sbjct: 204 AAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPS-GN-Y-LITASSDSTLKILD 257
Score = 131 (51.2 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 34/129 (26%), Positives = 59/129 (45%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ +GHR+AV C F + + + +GS D + +W M+ GH+ +T
Sbjct: 13 RHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPS 72
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPIS-VLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D +R+W +P+ S V R HTA V ++ F G + +++SDD T +
Sbjct: 73 GHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCS-DGQSF--VTASDDKTVK 128
Query: 356 IWDARYSQF 364
+W +F
Sbjct: 129 VWATHRQKF 137
Score = 90 (36.7 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKT 607
+S D R +++A D + +W+ + VHS H +D HP IA +AG D
Sbjct: 153 FSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIA-AAGMDNTV 211
Query: 608 IVWDI 612
VWD+
Sbjct: 212 KVWDV 216
Score = 60 (26.2 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 22/96 (22%), Positives = 40/96 (41%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWE 614
+ AA MD + VW+ L+ H+ + L HP + ++A D + D+ E
Sbjct: 202 IAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHP-SGNYLITASSDSTLKILDLME 260
Query: 615 GIPIRIYEISRFRDGASIILSDDVGQLYILNTGQGE 650
G +Y + + A+ + G+ Y + G E
Sbjct: 261 GR--LLYTLHGHQGPATTVAFSRTGE-YFASGGSDE 293
Score = 53 (23.7 bits), Expect = 6.6e-06, Sum P(3) = 6.6e-06
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN + + +++ A D + + + +G L+++L GH + A S G
Sbjct: 232 VNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFA-SGG 290
Query: 603 YDGKTIVW 610
D + +VW
Sbjct: 291 SDEQVMVW 298
Score = 50 (22.7 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 17/65 (26%), Positives = 28/65 (43%)
Query: 397 CCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHE-IDVLSGHENDVNYVQF--SG 453
C F+ +G + V+ S D ++W D+ + E + H V YV F SG
Sbjct: 150 CAKFSPDGRLIVSASDDKTVKLW----------DKSSRECVHSYCEHGGFVTYVDFHPSG 199
Query: 454 CAVAS 458
+A+
Sbjct: 200 TCIAA 204
Score = 50 (22.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 399 AFNANGTVFVTGSSDTLARVWNACKPNTDDSD 430
AF+ G F +G SD VW K N D D
Sbjct: 278 AFSRTGEYFASGGSDEQVMVW---KSNFDIVD 306
Score = 39 (18.8 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 399 AFNANGTVFVTGSSDTLARV 418
+F+ +G +T SSD+ ++
Sbjct: 236 SFHPSGNYLITASSDSTLKI 255
Score = 37 (18.1 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 13/65 (20%), Positives = 29/65 (44%)
Query: 1404 TVGLRSTRNRRT-SYLFCDSSPIDRRKTHQSLRKGSWLMLSTHEEGSRYIPQLGDEVVYL 1462
TV + R R + S+ ++ H S G++L+ ++ + + + + ++Y
Sbjct: 210 TVKVWDVRTHRLLQHYQLHSAAVNGLSFHPS---GNYLITASSDSTLKILDLMEGRLLYT 266
Query: 1463 RQGHQ 1467
GHQ
Sbjct: 267 LHGHQ 271
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 135 (52.6 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 33/122 (27%), Positives = 50/122 (40%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+ GH V C + ++ +TGS DR +KIW + + S GH +
Sbjct: 202 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSP 261
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D ++ W L I GH +AV + P ++ L++ S D T RIWD
Sbjct: 262 YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHP---TIDVLVTCSRDSTARIWD 318
Query: 359 AR 360
R
Sbjct: 319 VR 320
Score = 128 (50.1 bits), Expect = 0.00030, P = 0.00030
Identities = 34/140 (24%), Positives = 58/140 (41%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
V+ ++ + GH NAV + V+TGS D +++W + + H+ +
Sbjct: 319 VRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKKSVR 378
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D I + W+ PDG I L GH A + + + S L+S +
Sbjct: 379 AVILHPRHYTFASGSPDNI-KQWKFPDGNFIQNLSGHNAIINTLTVN----SDGVLVSGA 433
Query: 350 DDGTCRIWDARYSQFSPRIY 369
D+GT +WD R R++
Sbjct: 434 DNGTMHLWDWRTGYNFQRVH 453
Score = 82 (33.9 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 33/144 (22%), Positives = 54/144 (37%)
Query: 482 DNIVTCSRDGSAIIWIPRSRRS-HPKAARWTQAYHLKVXXXXXXXXXXXXXXXXXILPTP 540
D +VTCSRD +A IW R++ S H + +K +
Sbjct: 303 DVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLV 362
Query: 541 RGVNMIVWSLDNRFVLAAIMDCR-----------ICVWNAADGSLVHSLTGHTESTYVLD 589
G + + + V A I+ R I W DG+ + +L+GH L
Sbjct: 363 AGKTRVTLTNHKKSVRAVILHPRHYTFASGSPDNIKQWKFPDGNFIQNLSGHNAIINTLT 422
Query: 590 VHPFNPRIAMSAGYDGKTIVWDIW 613
V+ + + +S +G +WD W
Sbjct: 423 VN--SDGVLVSGADNGTMHLWD-W 443
Score = 45 (20.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 408 VTGSSDTLARVWN 420
VTGS DT R+W+
Sbjct: 348 VTGSHDTTIRLWD 360
Score = 41 (19.5 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 1483 TVKGNIRAVEFCKVESLEYATASGSGDSCCKM 1514
T+ G+ AV K ++ E +GS D+ ++
Sbjct: 327 TLSGHTNAVATVKCQAAEPQVVTGSHDTTIRL 358
>UNIPROTKB|E1BR73 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00597741
ProteinModelPortal:E1BR73 Ensembl:ENSGALT00000018802
ArrayExpress:E1BR73 Uniprot:E1BR73
Length = 1251
Score = 140 (54.3 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 35/127 (27%), Positives = 53/127 (41%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT--DX 291
+ + + H + + C F +YV T S D+ VKIW+ T CL H +
Sbjct: 647 ERLLEISAHDDEILCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQF 706
Query: 292 XXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDD 351
D I++W L D + + GH AV+ FSP Y + S S D
Sbjct: 707 NNRRGQYLLATCSDDTYIKLWDLKDKYCRNTMFGHVNAVSHCRFSPNDD--Y-IASCSTD 763
Query: 352 GTCRIWD 358
GT ++W+
Sbjct: 764 GTVKLWN 770
Score = 138 (53.6 bits), Expect = 5.0e-08, Sum P(3) = 5.0e-08
Identities = 34/132 (25%), Positives = 59/132 (44%)
Query: 231 QKMQNIKR--VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDI 288
+ ++N+ R VR HR+AVY A F R + + + D+ ++++ E+ L H+ +I
Sbjct: 600 KSLKNLSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEI 659
Query: 289 TDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSS 348
D +++W G + V HT V F+ R G Y L +
Sbjct: 660 LCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQ-YLLATC 718
Query: 349 SDDGTCRIWDAR 360
SDD ++WD +
Sbjct: 719 SDDTYIKLWDLK 730
Score = 74 (31.1 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDV 446
+ C F+++G++F+T S D R+W K E+DV+ H +V
Sbjct: 884 VHCVTFSSDGSLFLTSSEDQTIRIWETNKVCKSSDAVLKSELDVVF-HNGEV 934
Score = 62 (26.9 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 16/51 (31%), Positives = 22/51 (43%)
Query: 566 VWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYD-GKTIVWDIWEG 615
+W+ S++H L GH P N +A G D G +WDI G
Sbjct: 1113 IWSFESSSVLHELKGHEACVRCSAFSPSNKLLA--TGDDKGDIRIWDILTG 1161
Score = 62 (26.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 23/87 (26%), Positives = 37/87 (42%)
Query: 553 RFVLAAIMD-CRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWD 611
+++LA D I +W+ D +++ GH + P + IA S DG +W+
Sbjct: 712 QYLLATCSDDTYIKLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYIA-SCSTDGTVKLWN 770
Query: 612 IWEGIPIRIYEISRFRDGASIILSDDV 638
+ +R EI F A DDV
Sbjct: 771 VHSANELRTIEIKDFFRNADE-QQDDV 796
Score = 59 (25.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS 452
+ CA + +G+ F + S+D A++W+ +S HE L GHE V FS
Sbjct: 1090 VLSCAVSPDGSRFSSTSADKTAKIWSF------ESSSVLHE---LKGHEACVRCSAFS 1138
Score = 56 (24.8 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 19/68 (27%), Positives = 31/68 (45%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKT 607
++ D + ++++ D I VWN V L GH E+ + D +S +DG
Sbjct: 1013 FTTDCQTLISSAHDAVIQVWNWQLNECVF-LKGHKEA--IKDFAFLENSKLLSWSFDGTV 1069
Query: 608 IVWDIWEG 615
VW+I G
Sbjct: 1070 KVWNITTG 1077
Score = 50 (22.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 12/46 (26%), Positives = 19/46 (41%)
Query: 397 CCAFNANGTVFVTGSSDTLARVWNA--------CKPNTDDSDQPNH 434
C AF+ + + TG R+W+ C T D ++P H
Sbjct: 1134 CSAFSPSNKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEEEPTH 1179
Score = 50 (22.7 bits), Expect = 0.00059, Sum P(3) = 0.00059
Identities = 13/60 (21%), Positives = 25/60 (41%)
Query: 552 NRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWD 611
+ V A+ C I +WN S V GHT + + + + +++ D +W+
Sbjct: 851 DELVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSS-DGSLFLTSSEDQTIRIWE 909
Score = 49 (22.3 bits), Expect = 9.8e-06, Sum P(3) = 9.8e-06
Identities = 24/100 (24%), Positives = 41/100 (41%)
Query: 398 CAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVA 457
C F + ++ + D + +VWN Q N E L GH+ + F +
Sbjct: 1011 CRFTTDCQTLISSAHDAVIQVWNW---------QLN-ECVFLKGHKEAIKDFAFLENSKL 1060
Query: 458 SRFSLADSSK--EDSTPKFKNSWFCHDN-IVTC--SRDGS 492
+S + K +T K + + CH +++C S DGS
Sbjct: 1061 LSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGS 1100
Score = 48 (22.0 bits), Expect = 7.9e-07, Sum P(3) = 7.9e-07
Identities = 15/61 (24%), Positives = 22/61 (36%)
Query: 550 LDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIV 609
L+N +L+ D + VWN G H + V P R + S D +
Sbjct: 1055 LENSKLLSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGSRFS-STSADKTAKI 1113
Query: 610 W 610
W
Sbjct: 1114 W 1114
Score = 45 (20.9 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 398 CAFNANGTVFVTGSSDTLARVWNACKPN 425
C F+ N + S+D ++WN N
Sbjct: 748 CRFSPNDDYIASCSTDGTVKLWNVHSAN 775
>UNIPROTKB|F1P1P3 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00822807
Ensembl:ENSGALT00000038231 ArrayExpress:F1P1P3 Uniprot:F1P1P3
Length = 1252
Score = 140 (54.3 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 35/127 (27%), Positives = 53/127 (41%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT--DX 291
+ + + H + + C F +YV T S D+ VKIW+ T CL H +
Sbjct: 648 ERLLEISAHDDEILCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQF 707
Query: 292 XXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDD 351
D I++W L D + + GH AV+ FSP Y + S S D
Sbjct: 708 NNRRGQYLLATCSDDTYIKLWDLKDKYCRNTMFGHVNAVSHCRFSPNDD--Y-IASCSTD 764
Query: 352 GTCRIWD 358
GT ++W+
Sbjct: 765 GTVKLWN 771
Score = 138 (53.6 bits), Expect = 5.1e-08, Sum P(3) = 5.1e-08
Identities = 34/132 (25%), Positives = 59/132 (44%)
Query: 231 QKMQNIKR--VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDI 288
+ ++N+ R VR HR+AVY A F R + + + D+ ++++ E+ L H+ +I
Sbjct: 601 KSLKNLSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEI 660
Query: 289 TDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSS 348
D +++W G + V HT V F+ R G Y L +
Sbjct: 661 LCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQ-YLLATC 719
Query: 349 SDDGTCRIWDAR 360
SDD ++WD +
Sbjct: 720 SDDTYIKLWDLK 731
Score = 74 (31.1 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDV 446
+ C F+++G++F+T S D R+W K E+DV+ H +V
Sbjct: 885 VHCVTFSSDGSLFLTSSEDQTIRIWETNKVCKSSDAVLKSELDVVF-HNGEV 935
Score = 62 (26.9 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 16/51 (31%), Positives = 22/51 (43%)
Query: 566 VWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYD-GKTIVWDIWEG 615
+W+ S++H L GH P N +A G D G +WDI G
Sbjct: 1114 IWSFESSSVLHELKGHEACVRCSAFSPSNKLLA--TGDDKGDIRIWDILTG 1162
Score = 62 (26.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 23/87 (26%), Positives = 37/87 (42%)
Query: 553 RFVLAAIMD-CRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWD 611
+++LA D I +W+ D +++ GH + P + IA S DG +W+
Sbjct: 713 QYLLATCSDDTYIKLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYIA-SCSTDGTVKLWN 771
Query: 612 IWEGIPIRIYEISRFRDGASIILSDDV 638
+ +R EI F A DDV
Sbjct: 772 VHSANELRTIEIKDFFRNADE-QQDDV 797
Score = 59 (25.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS 452
+ CA + +G+ F + S+D A++W+ +S HE L GHE V FS
Sbjct: 1091 VLSCAVSPDGSRFSSTSADKTAKIWSF------ESSSVLHE---LKGHEACVRCSAFS 1139
Score = 56 (24.8 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 19/68 (27%), Positives = 31/68 (45%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKT 607
++ D + ++++ D I VWN V L GH E+ + D +S +DG
Sbjct: 1014 FTTDCQTLISSAHDAVIQVWNWQLNECVF-LKGHKEA--IKDFAFLENSKLLSWSFDGTV 1070
Query: 608 IVWDIWEG 615
VW+I G
Sbjct: 1071 KVWNITTG 1078
Score = 50 (22.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 12/46 (26%), Positives = 19/46 (41%)
Query: 397 CCAFNANGTVFVTGSSDTLARVWNA--------CKPNTDDSDQPNH 434
C AF+ + + TG R+W+ C T D ++P H
Sbjct: 1135 CSAFSPSNKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEEEPTH 1180
Score = 50 (22.7 bits), Expect = 0.00059, Sum P(3) = 0.00059
Identities = 13/60 (21%), Positives = 25/60 (41%)
Query: 552 NRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWD 611
+ V A+ C I +WN S V GHT + + + + +++ D +W+
Sbjct: 852 DELVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSS-DGSLFLTSSEDQTIRIWE 910
Score = 49 (22.3 bits), Expect = 9.8e-06, Sum P(3) = 9.8e-06
Identities = 24/100 (24%), Positives = 41/100 (41%)
Query: 398 CAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVA 457
C F + ++ + D + +VWN Q N E L GH+ + F +
Sbjct: 1012 CRFTTDCQTLISSAHDAVIQVWNW---------QLN-ECVFLKGHKEAIKDFAFLENSKL 1061
Query: 458 SRFSLADSSK--EDSTPKFKNSWFCHDN-IVTC--SRDGS 492
+S + K +T K + + CH +++C S DGS
Sbjct: 1062 LSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGS 1101
Score = 48 (22.0 bits), Expect = 7.9e-07, Sum P(3) = 7.9e-07
Identities = 15/61 (24%), Positives = 22/61 (36%)
Query: 550 LDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIV 609
L+N +L+ D + VWN G H + V P R + S D +
Sbjct: 1056 LENSKLLSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGSRFS-STSADKTAKI 1114
Query: 610 W 610
W
Sbjct: 1115 W 1115
Score = 45 (20.9 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 398 CAFNANGTVFVTGSSDTLARVWNACKPN 425
C F+ N + S+D ++WN N
Sbjct: 749 CRFSPNDDYIASCSTDGTVKLWNVHSAN 776
>RGD|620759 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein), beta
5" species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IC;ISO;TAS] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0043234 "protein complex" evidence=IDA]
[GO:0044297 "cell body" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:620759
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0004871 GO:GO:0044297 PRINTS:PR00319 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
CTD:10681 EMBL:AF001953 EMBL:AY552803 EMBL:BC089221 EMBL:AF022086
IPI:IPI00212659 RefSeq:NP_113958.1 UniGene:Rn.23042
ProteinModelPortal:P62882 SMR:P62882 PhosphoSite:P62882
PRIDE:P62882 GeneID:83579 KEGG:rno:83579 UCSC:RGD:620759
NextBio:616103 Genevestigator:P62882 Uniprot:P62882
Length = 353
Score = 132 (51.5 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 34/126 (26%), Positives = 50/126 (39%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT--DXXXX 294
K V H N + F S ++T S D +W +E+ L S GH D+ D
Sbjct: 147 KSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPS 206
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D VW + G + H + V ++ + P G + S SDD TC
Sbjct: 207 ETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPS-GDAFA--SGSDDATC 263
Query: 355 RIWDAR 360
R++D R
Sbjct: 264 RLYDLR 269
Score = 79 (32.9 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 22/69 (31%), Positives = 28/69 (40%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G + + +SL R + A D I VW+ GS V L GH L V P S
Sbjct: 285 GASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFC-SG 343
Query: 602 GYDGKTIVW 610
+D VW
Sbjct: 344 SWDHTLRVW 352
Score = 73 (30.8 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 326 HTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPS 385
HT ++A +F+ S Q+L++S DGTC +WD Q + +D + ++APS
Sbjct: 152 HTNYLSACSFT---NSDMQILTASGDGTCALWDVESGQLLQSFH-GHGADVLC-LDLAPS 206
Query: 386 SS 387
+
Sbjct: 207 ET 208
Score = 62 (26.9 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 233 MQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMET 274
M+ + ++GH N V C + + R +++ S D V +W T
Sbjct: 53 MKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFT 94
Score = 58 (25.5 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 19/57 (33%), Positives = 26/57 (45%)
Query: 404 GTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQF--SGCAVAS 458
G FV+G D A VW+ + + HE+DVN V++ SG A AS
Sbjct: 209 GNTFVSGGCDKKAMVWDM---------RSGQCVQAFETHESDVNSVRYYPSGDAFAS 256
Score = 53 (23.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS--GCAVA 457
F+ +G + G +D VW+ K + + +L GHEN V+ ++ S G A
Sbjct: 291 FSLSGRLLFAGYNDYTINVWDVLKGS---------RVSILFGHENRVSTLRVSPDGTAFC 341
Query: 458 S 458
S
Sbjct: 342 S 342
Score = 47 (21.6 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 403 NGTVFVTGSSDTLARVW 419
+GT F +GS D RVW
Sbjct: 336 DGTAFCSGSWDHTLRVW 352
>UNIPROTKB|F1SEX9 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 KO:K13124 OMA:CKQGAVR
EMBL:CU856041 RefSeq:XP_003123369.1 Ensembl:ENSSSCT00000014996
GeneID:100519823 KEGG:ssc:100519823 Uniprot:F1SEX9
Length = 311
Score = 129 (50.5 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 35/154 (22%), Positives = 61/154 (39%)
Query: 225 KPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGH 284
KP + +K + + AV F+ G Y +T D+ +K+W+ L + GH
Sbjct: 7 KPRGPELPQKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGH 66
Query: 285 EGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQ 344
++ D D + +W + G + RGH V + F+ +V
Sbjct: 67 GYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEE-ATV-- 123
Query: 345 LLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVA 378
+LS S D + R WD R + P + D ++
Sbjct: 124 ILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGIS 157
Score = 92 (37.4 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 34/143 (23%), Positives = 57/143 (39%)
Query: 236 IKRVRGHRNAVYCAI--FDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
++ GH V A FD S + +G D+ V +W + + + RGH G +
Sbjct: 60 LRTYSGHGYEVLDAAGSFDNSS--LCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQF 117
Query: 294 XXXXXXXXXXXXDCIIRVW----RLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D +R W R P+ P+ L ++++ S +++L+ S
Sbjct: 118 NEEATVILSGSIDSSVRCWDCRSRKPE--PVQTLDEARDGISSVKVSD-----HEVLAGS 170
Query: 350 DDGTCRIWDARYSQ-FSPRIYIP 371
DG R +D R Q FS + P
Sbjct: 171 VDGRVRRYDLRMGQLFSDYVGSP 193
Score = 80 (33.2 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLD--VHPFNPRIAMSAGYDG 605
+S D + L + +D + + + G L+ TGH Y LD + + + +S DG
Sbjct: 199 FSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNQEYKLDCCLSERDTHV-VSCSEDG 257
Query: 606 KTIVWDIWEGI 616
K WD+ EG+
Sbjct: 258 KVFFWDLVEGV 268
Score = 48 (22.0 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 14/56 (25%), Positives = 23/56 (41%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVW 610
V++ D ++ W+ +G LV +L L HP P + + G G W
Sbjct: 250 VVSCSEDGKVFFWDLVEGVLVLALPVGPSVVQSLAYHPTEPCLLTAMG--GSVQCW 303
Score = 45 (20.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 483 NIVTCSRDGSAIIW 496
++V+CS DG W
Sbjct: 249 HVVSCSEDGKVFFW 262
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 143 (55.4 bits), Expect = 3.3e-08, Sum P(3) = 3.3e-08
Identities = 37/125 (29%), Positives = 59/125 (47%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXX 299
RGH + + CA FD R V + S D +V +W+ + GH+G +
Sbjct: 44 RGHEDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVKYSPDGET 103
Query: 300 XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA 359
D IR+W+ S+++ H A+ +++FS G Y LLSSSDD T ++W
Sbjct: 104 IASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGG--Y-LLSSSDDKTLKLWRL 160
Query: 360 RYSQF 364
+ +F
Sbjct: 161 QDKKF 165
Score = 129 (50.5 bits), Expect = 9.5e-07, Sum P(3) = 9.5e-07
Identities = 39/173 (22%), Positives = 67/173 (38%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH+ AVYC + G + + DR +++W + + H G I
Sbjct: 87 GHKGAVYCVKYSPDGETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGGYL 146
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
D +++WRL D + GH V + SP + + S SDD T +WD
Sbjct: 147 LSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISP---DMRLVASGSDDKTVMLWDLN 203
Query: 361 YSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSD 413
+ + + Y D V ++ +S + F+ +GT ++ S D
Sbjct: 204 FQKIVSK-YSTL-DDNV---KISQINSYSDHMDTVSQVLFHPDGTCLISSSFD 251
Score = 101 (40.6 bits), Expect = 0.00075, Sum P(3) = 0.00075
Identities = 38/185 (20%), Positives = 76/185 (41%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
++ H A+ F G Y+++ SDD+ +K+W ++ + S GH+ +
Sbjct: 127 IKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMR 186
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLR--GHTAAVTAI-AFSPRPGSVYQLLSSSDDGTCR 355
D + +W L +S ++ I ++S +V Q+L D GTC
Sbjct: 187 LVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPD-GTCL 245
Query: 356 IWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTL 415
I S F +I I +D + + + ++ Q + I + + G + SD+
Sbjct: 246 I----SSSFDHKIKI---TDIRSNKLIQHYNAHDAQVNSI---SIHPTGYFLASAGSDSK 295
Query: 416 ARVWN 420
++W+
Sbjct: 296 IKIWD 300
Score = 77 (32.2 bits), Expect = 3.3e-08, Sum P(3) = 3.3e-08
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNY 448
FN +G F TG S L VW K N D + Q ++ + +NDV Y
Sbjct: 322 FNQSGDYFATGGSQNLCMVW---KTNFDQNIQNIEQVQRSTVRQNDVEY 367
Score = 48 (22.0 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 31/145 (21%), Positives = 56/145 (38%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN I F+ +A D +I +W+ G +++L + + + + A + G
Sbjct: 275 VNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDITTVQFNQSGDYFA-TGG 333
Query: 603 YDGKTIVWDIWEGIPIRIYEISRFRDGASIILSDDV----GQLY---ILNTGQGESQKDA 655
+VW I I + + S + +DV G LY + T + S +
Sbjct: 334 SQNLCMVWKT--NFDQNIQNIEQVQ--RSTVRQNDVEYSSGGLYAQTLFKTNKTASLSPS 389
Query: 656 KYDQFFLGDYRPLVQDTYGNVLDQE 680
K + + +QDT+ N D E
Sbjct: 390 KKTISIIPPQQ--LQDTFNNRGDDE 412
Score = 45 (20.9 bits), Expect = 3.3e-08, Sum P(3) = 3.3e-08
Identities = 17/60 (28%), Positives = 26/60 (43%)
Query: 1686 QSRLENNYYRGLEAVKHDIAVMLSNAESYFGRNTDLSTKIKRLSDLVTRTLSSLKAPQFH 1745
Q L N Y GLE V + + +S N + + IK +D + +S+ A FH
Sbjct: 437 QLNLSENQYPGLEIVGNQFNLQ----QSTLSNNNNQNNLIKSQNDSI---VSNKNAIPFH 489
Score = 43 (20.2 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 1462 LRQGHQEYINYSGSREV 1478
LRQG Q Y YS +++
Sbjct: 301 LRQGRQIYTLYSNDKDI 317
Score = 40 (19.1 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 1108 VKPEKDGIDISCGEEITNCGDNTDEVPLKN--VKNLSGENNDVYSGDASCKEQQSGFSEL 1165
+ P K I I +++ + +N + L N V N+ +S ++QQ SE
Sbjct: 386 LSPSKKTISIIPPQQLQDTFNNRGDDELNNGRVHENKQSNSPTFSQQQ--QQQQLNLSE- 442
Query: 1166 NYYDESKCV-NTTD-EDTTPYPNHLQNGTIQ 1194
N Y + V N + + +T N+ QN I+
Sbjct: 443 NQYPGLEIVGNQFNLQQSTLSNNNNQNNLIK 473
Score = 38 (18.4 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 19/81 (23%), Positives = 36/81 (44%)
Query: 1266 QRLNAQIDSTSEHDPLGSHSHSHDPLGSHSHSHSRKMFNVVYRRSKTNRDRTNSEGDGGG 1325
Q+L ++ + D L ++ H+ S+S + S++ S+ G+
Sbjct: 399 QQLQDTFNNRGD-DEL-NNGRVHENKQSNSPTFSQQQQQQQLNLSENQYPGLEIVGNQFN 456
Query: 1326 VGESTLNANNN--NFHESATD 1344
+ +STL+ NNN N +S D
Sbjct: 457 LQQSTLSNNNNQNNLIKSQND 477
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 127 (49.8 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 33/116 (28%), Positives = 48/116 (41%)
Query: 242 HRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXX 301
H+ ++ +++ G Y+++ D+ IW T C H D
Sbjct: 450 HKGPIFALKWNKCGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAFAS 509
Query: 302 XXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIW 357
D I V RL PI +GHT V AI + P+ G + L S SDD T +IW
Sbjct: 510 CST-DQRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQ-GQL--LASCSDDMTLKIW 561
Score = 100 (40.3 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 43/175 (24%), Positives = 67/175 (38%)
Query: 322 VLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRN 381
VLRGH + V A++P S L S S D T RIWD + + + R G
Sbjct: 350 VLRGHESEVFICAWNP---SRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAE 406
Query: 382 MAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSG 441
+ P + + +N +G++ TGS D AR+W Q I L
Sbjct: 407 V-------PSNKDVTSLDWNCDGSLLATGSYDGYARIWKTDGRLASTLGQHKGPIFALKW 459
Query: 442 HENDVNYVQFSGC---AVASRFSLADSSKE---DSTPKFKNSWFCHDNIVTCSRD 490
++ NY+ +G + S +++ S P W + +CS D
Sbjct: 460 NKCG-NYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAFASCSTD 513
Score = 96 (38.9 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 46/180 (25%), Positives = 72/180 (40%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETA------YCLASCRGHEG------ 286
+RGH + V+ ++ S + +GS D +IW M A L C G
Sbjct: 351 LRGHESEVFICAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAEVPSN 410
Query: 287 -DITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQL 345
D+T D R+W+ DG S L H + A+ ++ + G+ Y +
Sbjct: 411 KDVTSLDWNCDGSLLATGSYDGYARIWKT-DGRLASTLGQHKGPIFALKWN-KCGN-Y-I 466
Query: 346 LSSSDDGTCRIWDARYSQFSPRI-YIPRPS-DAVAGRNMAPSSSAGPQSHQIFCCAFNAN 403
LS+ D T IWDA Q + + + P+ D N A +S + Q +I C N
Sbjct: 467 LSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAFASCSTDQ--RIHVCRLGVN 524
Score = 93 (37.8 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 25/86 (29%), Positives = 39/86 (45%)
Query: 538 PTPRGVNMIVWSLDNRFVLA-AIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPR 596
PT G N + + +LA A D + +W+ GS +H+LT HTE Y + P
Sbjct: 586 PTGPGTN----NPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKH 641
Query: 597 IAMSAGYDGKTIVWDIWEGIPIRIYE 622
+A S +D +W G + Y+
Sbjct: 642 LA-SGSFDKCVHIWSTQTGQLVHSYK 666
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 135 (52.6 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 33/122 (27%), Positives = 50/122 (40%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+ GH V C + ++ +TGS DR +KIW + + S GH +
Sbjct: 199 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 258
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D ++ W L I GH +AV + P ++ L++ S D T RIWD
Sbjct: 259 YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHP---TIDVLVTCSRDSTARIWD 315
Query: 359 AR 360
R
Sbjct: 316 VR 317
Score = 129 (50.5 bits), Expect = 0.00024, P = 0.00024
Identities = 34/140 (24%), Positives = 58/140 (41%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
V+ ++ + GH NAV + +ITGS D +++W + + H+ +
Sbjct: 316 VRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVR 375
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D I + W+ PDG I L GH A + + + S L+S +
Sbjct: 376 AVVLHPRHYTFASGSPDNI-KQWKFPDGSFIQNLSGHNAIINTLTVN----SDGVLVSGA 430
Query: 350 DDGTCRIWDARYSQFSPRIY 369
D+GT +WD R R++
Sbjct: 431 DNGTMHLWDWRTGYNFQRVH 450
Score = 81 (33.6 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 32/144 (22%), Positives = 54/144 (37%)
Query: 482 DNIVTCSRDGSAIIWIPRSRRS-HPKAARWTQAYHLKVXXXXXXXXXXXXXXXXXILPTP 540
D +VTCSRD +A IW R++ S H + ++ +
Sbjct: 300 DVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLV 359
Query: 541 RGVNMIVWSLDNRFVLAAIMDCR-----------ICVWNAADGSLVHSLTGHTESTYVLD 589
G + + + V A ++ R I W DGS + +L+GH L
Sbjct: 360 AGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNIKQWKFPDGSFIQNLSGHNAIINTLT 419
Query: 590 VHPFNPRIAMSAGYDGKTIVWDIW 613
V+ + + +S +G +WD W
Sbjct: 420 VN--SDGVLVSGADNGTMHLWD-W 440
Score = 44 (20.5 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 408 VTGSSDTLARVWN 420
+TGS DT R+W+
Sbjct: 345 ITGSHDTTIRLWD 357
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 135 (52.6 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 33/122 (27%), Positives = 50/122 (40%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+ GH V C + ++ +TGS DR +KIW + + S GH +
Sbjct: 200 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 259
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D ++ W L I GH +AV + P ++ L++ S D T RIWD
Sbjct: 260 YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHP---TIDVLVTCSRDSTARIWD 316
Query: 359 AR 360
R
Sbjct: 317 VR 318
Score = 129 (50.5 bits), Expect = 0.00024, P = 0.00024
Identities = 34/140 (24%), Positives = 58/140 (41%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
V+ ++ + GH NAV + +ITGS D +++W + + H+ +
Sbjct: 317 VRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVR 376
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D I + W+ PDG I L GH A + + + S L+S +
Sbjct: 377 AVVLHPRHYTFASGSPDNI-KQWKFPDGSFIQNLSGHNAIINTLTVN----SDGVLVSGA 431
Query: 350 DDGTCRIWDARYSQFSPRIY 369
D+GT +WD R R++
Sbjct: 432 DNGTMHLWDWRTGYNFQRVH 451
Score = 81 (33.6 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 32/144 (22%), Positives = 54/144 (37%)
Query: 482 DNIVTCSRDGSAIIWIPRSRRS-HPKAARWTQAYHLKVXXXXXXXXXXXXXXXXXILPTP 540
D +VTCSRD +A IW R++ S H + ++ +
Sbjct: 301 DVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLV 360
Query: 541 RGVNMIVWSLDNRFVLAAIMDCR-----------ICVWNAADGSLVHSLTGHTESTYVLD 589
G + + + V A ++ R I W DGS + +L+GH L
Sbjct: 361 AGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNIKQWKFPDGSFIQNLSGHNAIINTLT 420
Query: 590 VHPFNPRIAMSAGYDGKTIVWDIW 613
V+ + + +S +G +WD W
Sbjct: 421 VN--SDGVLVSGADNGTMHLWD-W 441
Score = 44 (20.5 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 408 VTGSSDTLARVWN 420
+TGS DT R+W+
Sbjct: 346 ITGSHDTTIRLWD 358
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 135 (52.6 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 33/122 (27%), Positives = 50/122 (40%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+ GH V C + ++ +TGS DR +KIW + + S GH +
Sbjct: 201 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 260
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D ++ W L I GH +AV + P ++ L++ S D T RIWD
Sbjct: 261 YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHP---TIDVLVTCSRDSTARIWD 317
Query: 359 AR 360
R
Sbjct: 318 VR 319
Score = 129 (50.5 bits), Expect = 0.00024, P = 0.00024
Identities = 34/140 (24%), Positives = 58/140 (41%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
V+ ++ + GH NAV + +ITGS D +++W + + H+ +
Sbjct: 318 VRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVR 377
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D I + W+ PDG I L GH A + + + S L+S +
Sbjct: 378 AVVLHPRHYTFASGSPDNI-KQWKFPDGSFIQNLSGHNAIINTLTVN----SDGVLVSGA 432
Query: 350 DDGTCRIWDARYSQFSPRIY 369
D+GT +WD R R++
Sbjct: 433 DNGTMHLWDWRTGYNFQRVH 452
Score = 81 (33.6 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 32/144 (22%), Positives = 54/144 (37%)
Query: 482 DNIVTCSRDGSAIIWIPRSRRS-HPKAARWTQAYHLKVXXXXXXXXXXXXXXXXXILPTP 540
D +VTCSRD +A IW R++ S H + ++ +
Sbjct: 302 DVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLV 361
Query: 541 RGVNMIVWSLDNRFVLAAIMDCR-----------ICVWNAADGSLVHSLTGHTESTYVLD 589
G + + + V A ++ R I W DGS + +L+GH L
Sbjct: 362 AGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNIKQWKFPDGSFIQNLSGHNAIINTLT 421
Query: 590 VHPFNPRIAMSAGYDGKTIVWDIW 613
V+ + + +S +G +WD W
Sbjct: 422 VN--SDGVLVSGADNGTMHLWD-W 442
Score = 44 (20.5 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 408 VTGSSDTLARVWN 420
+TGS DT R+W+
Sbjct: 347 ITGSHDTTIRLWD 359
>FB|FBgn0001105 [details] [associations]
symbol:Gbeta13F "G protein beta-subunit 13F" species:7227
"Drosophila melanogaster" [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS;NAS] [GO:0003924 "GTPase activity"
evidence=ISS;NAS] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISS;NAS] [GO:0055059 "asymmetric neuroblast
division" evidence=IMP] [GO:0007015 "actin filament organization"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=TAS] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005886 GO:GO:0005875 GO:GO:0007015
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 ChiTaRS:Gbeta13F EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0045176
PRINTS:PR00319 GO:GO:0055059 GeneTree:ENSGT00550000074331 KO:K04536
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:M22567
EMBL:AY058566 PIR:A40489 RefSeq:NP_525090.1 RefSeq:NP_727907.1
RefSeq:NP_996459.1 RefSeq:NP_996460.1 RefSeq:NP_996461.1
RefSeq:NP_996462.1 UniGene:Dm.7041 ProteinModelPortal:P26308
SMR:P26308 DIP:DIP-18432N MINT:MINT-1016369 STRING:P26308
PaxDb:P26308 PRIDE:P26308 EnsemblMetazoa:FBtr0074106
EnsemblMetazoa:FBtr0074107 EnsemblMetazoa:FBtr0074108
EnsemblMetazoa:FBtr0074110 EnsemblMetazoa:FBtr0074111
EnsemblMetazoa:FBtr0331597 GeneID:32544 KEGG:dme:Dmel_CG10545
CTD:32544 FlyBase:FBgn0001105 InParanoid:P26308 OrthoDB:EOG4NS1T0
PhylomeDB:P26308 GenomeRNAi:32544 NextBio:779043 Bgee:P26308
GermOnline:CG10545 Uniprot:P26308
Length = 340
Score = 145 (56.1 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 33/127 (25%), Positives = 54/127 (42%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ + GH + C F ++T S D +W +ET + S GH GD+
Sbjct: 137 RELPGHGGYLSCCRF-LDDNQIVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSLAPQ 195
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D ++W + +G+ GH + + A+ F P G + + SDD TCR+
Sbjct: 196 CKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPN-GQAFA--TGSDDATCRL 252
Query: 357 WDARYSQ 363
+D R Q
Sbjct: 253 FDIRADQ 259
Score = 64 (27.6 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 388 AGPQSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
AG +++ C NG TGS D+ RVWN
Sbjct: 309 AG-HDNRVSCLGVTENGMAVATGSWDSFLRVWN 340
Score = 57 (25.1 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 17/70 (24%), Positives = 26/70 (37%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G+ + +S R +LA D VW+ L GH L V +A +
Sbjct: 272 GITSVAFSKSGRLLLAGYDDFNCNVWDTMKAERSGILAGHDNRVSCLGVTENGMAVA-TG 330
Query: 602 GYDGKTIVWD 611
+D VW+
Sbjct: 331 SWDSFLRVWN 340
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 142 (55.0 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 39/148 (26%), Positives = 62/148 (41%)
Query: 235 NIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
N+ + GH N V + + +ITGS D V++W + + + H+ +
Sbjct: 290 NVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLH 349
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D I + WR P+G + + GHT+ V +A + S L+S D+GT
Sbjct: 350 PSLYMFASASPDNI-KQWRCPEGKFVQNISGHTSIVNCMAAN----SEGVLVSGGDNGTM 404
Query: 355 RIWDARYSQFSPRIYIP-RPS--DAVAG 379
WD R R P +P D+ AG
Sbjct: 405 FFWDWRTGYNFQRFQAPVQPGSMDSEAG 432
Score = 137 (53.3 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 37/140 (26%), Positives = 57/140 (40%)
Query: 222 AIAKPSTMVQ-KMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLAS 280
+I KP K+ + + GH V C + + TG+ DR++KIW + + S
Sbjct: 152 SIPKPKWHAPWKLSRV--ISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLS 209
Query: 281 CRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPG 340
GH + D ++ W L I GH +AV ++A P
Sbjct: 210 LTGHVSTVRGVAVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHP--- 266
Query: 341 SVYQLLSSSDDGTCRIWDAR 360
++ L +S D T RIWD R
Sbjct: 267 TIDVLATSGRDSTARIWDMR 286
Score = 112 (44.5 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 29/119 (24%), Positives = 46/119 (38%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH + V Y+ + +DR VK W +E + GH +
Sbjct: 212 GHVSTVRGVAVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVL 271
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAI-AFSPRPGSVYQLLSSSDDGTCRIWD 358
D R+W + + L GHT V ++ A + P Q+++ S D T R+WD
Sbjct: 272 ATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQATNP----QIITGSHDSTVRLWD 326
Score = 78 (32.5 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 566 VWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWEG 615
+W+ + VH+LTGHT + + NP+I ++ +D +WD+ G
Sbjct: 282 IWDMRTKANVHTLTGHTNTVASVVAQATNPQI-ITGSHDSTVRLWDLAAG 330
Score = 63 (27.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 14/60 (23%), Positives = 27/60 (45%)
Query: 554 FVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIW 613
++ A+ I W +G V +++GHT + + + + +S G +G WD W
Sbjct: 353 YMFASASPDNIKQWRCPEGKFVQNISGHTSIVNCMAAN--SEGVLVSGGDNGTMFFWD-W 409
Score = 61 (26.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHP 592
V +V N ++ D + +W+ A G V +LT H +S + +HP
Sbjct: 301 VASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLHP 350
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 127 (49.8 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 29/129 (22%), Positives = 56/129 (43%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
+++ + ++ + GHR+ F G + +GS D +KIW + C+ + +GH +
Sbjct: 88 LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D I++VW L G ++ + H + ++ F P + L + S
Sbjct: 148 VLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHE---FLLATGS 204
Query: 350 DDGTCRIWD 358
D T + WD
Sbjct: 205 ADRTVKFWD 213
Score = 122 (48.0 bits), Expect = 3.6e-08, Sum P(3) = 3.6e-08
Identities = 32/120 (26%), Positives = 48/120 (40%)
Query: 242 HRNAVYCAIFDR-SGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
H AV C R S R ++TG +D V +W++ + S GH I
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLV 74
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
I++W L + + L GH + ++ F P G + S S D +IWD R
Sbjct: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPF-GEFFA--SGSLDTNLKIWDIR 131
Score = 122 (48.0 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 28/108 (25%), Positives = 44/108 (40%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
++K I +GH V F GR+V++G +D +VK+W + L + HEG I
Sbjct: 130 IRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQ 189
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSP 337
D ++ W L I TA V ++F+P
Sbjct: 190 SLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNP 237
Score = 121 (47.7 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 31/138 (22%), Positives = 57/138 (41%)
Query: 221 YAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLAS 280
+AI KP+ ++ + GH + + FD S V G+ +K+W +E A + +
Sbjct: 44 WAIGKPNAILS-------LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRT 96
Query: 281 CRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPG 340
GH + D +++W + I +GHT V + F+P G
Sbjct: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTP-DG 155
Query: 341 SVYQLLSSSDDGTCRIWD 358
++S +D ++WD
Sbjct: 156 R--WVVSGGEDNIVKVWD 171
Score = 88 (36.0 bits), Expect = 3.6e-08, Sum P(3) = 3.6e-08
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
RGVN++ ++ D R+V++ D + VW+ G L+ H LD HP ++
Sbjct: 144 RGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHE--FLLA 201
Query: 601 AGYDGKTI-VWDI 612
G +T+ WD+
Sbjct: 202 TGSADRTVKFWDL 214
Score = 60 (26.2 bits), Expect = 3.6e-08, Sum P(3) = 3.6e-08
Identities = 31/150 (20%), Positives = 55/150 (36%)
Query: 1218 RDADVENQNNGCDALHGSSLDIKPNSLPEVLESDGTNRTSSDRGADGSQRLNAQIDSTSE 1277
RD V N NN L L + N P + E+ R S + +D S + I +S
Sbjct: 324 RDPVVLNDNNSKTVL--GKLSVSQNVDPLLKETKSLGRLSVSQNSDPSTKETKSIGRSST 381
Query: 1278 HDPLGSHSHSHDPLGSHSHSHSRKMFNVVYRRSKTNRDRTNSEGDGGGVGESTLNANNNN 1337
S PLG S S + V + S+T + G V + ++ +
Sbjct: 382 SQNSESSMKESKPLGRLSVSQNSD----VSKESRTFSSTGSLPGTPHRVSSTNVSKATSG 437
Query: 1338 FHESATDGSRRTRSMGLKTTTCDPDNVSSN 1367
+ ++ + R+ +P N +++
Sbjct: 438 VSTAVSNAATSRRNFTKANPKANPVNKAAD 467
Score = 52 (23.4 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 387 SAGPQSHQIFCCAFNANGTVFVTGSSDTL 415
S GP++ + C +FN +G + G ++L
Sbjct: 222 SGGPETAGVRCLSFNPDGKTVLCGLQESL 250
Score = 51 (23.0 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 26/90 (28%), Positives = 40/90 (44%)
Query: 547 VWSLD---NRFVLAA-IMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
+ SLD + F+LA D + W+ L+ S G E+ V + FNP
Sbjct: 188 IQSLDFHPHEFLLATGSADRTVKFWDLETFELIGS--GGPETAGVRCLS-FNP------- 237
Query: 603 YDGKTIVWDIWEGIPIRIYEISRFRDGASI 632
DGKT++ + E + I +E R DG +
Sbjct: 238 -DGKTVLCGLQESLKIFSWEPIRCHDGVDV 266
Score = 49 (22.3 bits), Expect = 4.5e-07, Sum P(3) = 4.5e-07
Identities = 29/149 (19%), Positives = 60/149 (40%)
Query: 1262 ADGSQRLNAQIDSTSEHDPLGSHSHSHDPLGSHSHSHSRKMFNVVYRRSKTNRDRTNSEG 1321
++ R+ + + E+ L SH + DP + S R ++V R + R +N EG
Sbjct: 569 SNSRSRMGSPPRNHDENYDLVSHRSNRDPSPTESQKGGRFQ-SLVINRERRGRF-SNFEG 626
Query: 1322 DGGGVGESTLNANN---NNFHESATDGSRRTRSMGLKTTTCDPDNVSSNLRLEQHNQPED 1378
+ A N +N + G+ G+ + + +N+ ++ + +HNQ
Sbjct: 627 PVSNFSSGNMPAPNIRPSNMFKQR--GNHMPVEQGIDSPS--EENIVEDI-MGKHNQ--- 678
Query: 1379 MYSGHNRSTSRCQLPHEEWGSSS-KMTVG 1406
S ++ Q+ W + K ++G
Sbjct: 679 FVSSMQSRLAKLQVVRRYWERNDVKNSIG 707
Score = 44 (20.5 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 400 FNANGTVFVTGSSDTLARVWN 420
F +G V+G D + +VW+
Sbjct: 151 FTPDGRWVVSGGEDNIVKVWD 171
Score = 39 (18.8 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 1235 SSLDIKPNSLPEVLESDGTNRTSSDRGADGSQRLNAQIDSTSEHDPL 1281
+ LDI ++P L++ + R+ S R + +A + SE P+
Sbjct: 488 AELDIIARTMPYSLQAADSRRSPSSR--NNPDLPDASVLEMSESQPV 532
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 173 (66.0 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 58/231 (25%), Positives = 98/231 (42%)
Query: 222 AIAKPSTMVQKMQNIKRVRGHRNAVYC--AIFDRSGRYVITGSDDRLVKIWSMETAYCLA 279
A+ + + + ++N+ + +Y F G+++ TG++DRL++IW +E +
Sbjct: 420 AMTSAAELAKDVENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVM 479
Query: 280 SCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRP 339
+GHE DI D +R+W L G S+ VT +A SP
Sbjct: 480 ILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG-QCSLTLSIEDGVTTVAVSPGD 538
Query: 340 GSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCA 399
G Y + + S D R+WD+ R+ D+ N S G + ++
Sbjct: 539 GK-Y-IAAGSLDRAVRVWDSETGFLVERL------DS---EN---ESGTGHKD-SVYSVV 583
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNT-DDSDQPNH---EIDVLSGHENDV 446
F +G V+GS D ++WN N DS PN E+ + GH++ V
Sbjct: 584 FTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYI-GHKDFV 633
Score = 50 (22.7 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 16/66 (24%), Positives = 28/66 (42%)
Query: 551 DNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDV---HPFNPR---IAMSAGYD 604
++ ++L+ D + W+ G+ + L GH S + V P P A +G D
Sbjct: 641 NDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSPLGPEYNVFATGSG-D 699
Query: 605 GKTIVW 610
K +W
Sbjct: 700 CKARIW 705
Score = 42 (19.8 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 7 IPSADAPSGTMKPL----SFSSKVHENAQLAGSDTSQPAELDV 45
+PS AP T+K + +SK+++ + T+ E ++
Sbjct: 225 LPSVKAPESTLKETEPENNNTSKINDTGSATTATTTTATETEI 267
>ASPGD|ASPL0000042645 [details] [associations]
symbol:AN1468 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR027106 PANTHER:PTHR19846
EMBL:AACD01000022 InterPro:IPR014906 Pfam:PF08799
HOGENOM:HOG000157615 KO:K12662 OMA:CKIWDLR OrthoDB:EOG4V1B90
RefSeq:XP_659072.1 ProteinModelPortal:Q5BDB2 SMR:Q5BDB2
STRING:Q5BDB2 EnsemblFungi:CADANIAT00008085 GeneID:2875152
KEGG:ani:AN1468.2 Uniprot:Q5BDB2
Length = 521
Score = 146 (56.5 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 37/131 (28%), Positives = 56/131 (42%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
+ K Q + + GH V F SG+Y+ + S D ++W +ET L GH ++
Sbjct: 279 LDKDQPLATLEGHSGRVCRTEFHPSGKYIASASYDTTWRLWDVETTAELQLQEGHSREVY 338
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D I RVW L G + +L GH + + + G Y++LS S
Sbjct: 339 TVAFNNDGSLLASGGLDSIGRVWDLRTGRTVMILEGHIREIFGLDWGV-DG--YRVLSGS 395
Query: 350 DDGTCRIWDAR 360
DG + WD R
Sbjct: 396 GDGWVKCWDLR 406
Score = 69 (29.3 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 554 FVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDI 612
F +++ D + +++A D SL+ +L+GH+ + D+ N + S G+D +W I
Sbjct: 463 FFVSSGFDKNVNIFSADDWSLIKTLSGHSGNVLSADISN-NAQWIASCGHDRTVKLWGI 520
Score = 46 (21.3 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 1108 VKPEKDG-IDISCG-EEITNCGDNTDEVPLKNVKNLSGENNDVYSGDASCKEQ 1158
V+P K G +S G ++ N + D+ L +K LSG + +V S D S Q
Sbjct: 455 VQPRKSGTFFVSSGFDKNVNIF-SADDWSL--IKTLSGHSGNVLSADISNNAQ 504
>UNIPROTKB|A5PJS1 [details] [associations]
symbol:GNB5 "GNB5 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ
EMBL:DAAA02028995 EMBL:DAAA02028996 EMBL:BC142218 IPI:IPI00695391
RefSeq:NP_001092540.1 UniGene:Bt.48572 SMR:A5PJS1 MINT:MINT-6824860
STRING:A5PJS1 Ensembl:ENSBTAT00000004896 GeneID:535365
KEGG:bta:535365 InParanoid:A5PJS1 NextBio:20876717 Uniprot:A5PJS1
Length = 353
Score = 131 (51.2 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 33/126 (26%), Positives = 50/126 (39%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT--DXXXX 294
K V H N + F S ++T S D +W +E+ L S GH D+ D
Sbjct: 147 KSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPS 206
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D VW + G + H + + ++ + P G + S SDD TC
Sbjct: 207 ETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPS-GDAFA--SGSDDATC 263
Query: 355 RIWDAR 360
R++D R
Sbjct: 264 RLYDLR 269
Score = 79 (32.9 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 22/69 (31%), Positives = 28/69 (40%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G + + +SL R + A D I VW+ GS V L GH L V P S
Sbjct: 285 GASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFC-SG 343
Query: 602 GYDGKTIVW 610
+D VW
Sbjct: 344 SWDHTLRVW 352
Score = 73 (30.8 bits), Expect = 2.7e-05, Sum P(4) = 2.7e-05
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 326 HTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPS 385
HT ++A +F+ S Q+L++S DGTC +WD Q + +D + ++APS
Sbjct: 152 HTNYLSACSFT---NSDMQILTASGDGTCALWDVESGQLLQSFH-GHGADVLC-LDLAPS 206
Query: 386 SS 387
+
Sbjct: 207 ET 208
Score = 60 (26.2 bits), Expect = 2.7e-05, Sum P(4) = 2.7e-05
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 233 MQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMET 274
M+ + ++GH N V C + + R +++ S D V +W T
Sbjct: 53 MKTRRTLKGHGNKVLCMDWCKDKRRLVSSSQDGKVIVWDSFT 94
Score = 57 (25.1 bits), Expect = 2.7e-05, Sum P(4) = 2.7e-05
Identities = 18/57 (31%), Positives = 26/57 (45%)
Query: 404 GTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQF--SGCAVAS 458
G FV+G D A VW+ + + HE+D+N V++ SG A AS
Sbjct: 209 GNTFVSGGCDKKAMVWDM---------RSGQCVQAFETHESDINSVRYYPSGDAFAS 256
Score = 53 (23.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS--GCAVA 457
F+ +G + G +D VW+ K + + +L GHEN V+ ++ S G A
Sbjct: 291 FSLSGRLLFAGYNDYTINVWDVLKGS---------RVSILFGHENRVSTLRVSPDGTAFC 341
Query: 458 S 458
S
Sbjct: 342 S 342
Score = 47 (21.6 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 403 NGTVFVTGSSDTLARVW 419
+GT F +GS D RVW
Sbjct: 336 DGTAFCSGSWDHTLRVW 352
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 163 (62.4 bits), Expect = 3.8e-07, Sum P(3) = 3.8e-07
Identities = 41/129 (31%), Positives = 61/129 (47%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
V K I + GH +AV C F+ S V+ GS +++W +E A L + GH+ I+
Sbjct: 50 VSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASIS 109
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D I++W + + +GHT AV +AFSP G L S+S
Sbjct: 110 SLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSP-DGK--WLASAS 166
Query: 350 DDGTCRIWD 358
DD T ++WD
Sbjct: 167 DDSTVKLWD 175
Score = 147 (56.8 bits), Expect = 6.8e-05, Sum P(3) = 6.8e-05
Identities = 32/123 (26%), Positives = 54/123 (43%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXX 295
++ + GH+ ++ F G Y+ +GS D +K+W + C+ +GH +
Sbjct: 98 LRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSP 157
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D +++W L G I+ HT+AV + F P Y L S S D T +
Sbjct: 158 DGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNE---YLLASGSADRTVK 214
Query: 356 IWD 358
+WD
Sbjct: 215 LWD 217
Score = 130 (50.8 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 33/126 (26%), Positives = 55/126 (43%)
Query: 236 IKRVRGHRNAVYCAIFDRS-GRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
++ + H + V + +S GR + TG +D V IW++ C+ S GH +
Sbjct: 13 LQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFN 72
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
+R+W L + L GH A+++++ F P G Y L S S D
Sbjct: 73 SSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPM-GE-Y-LASGSVDSNI 129
Query: 355 RIWDAR 360
++WD R
Sbjct: 130 KLWDVR 135
Score = 91 (37.1 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
+ V + +S D +++ +A D + +W+ G ++ T HT + V+ HP N + S
Sbjct: 148 QAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHP-NEYLLAS 206
Query: 601 AGYDGKTIVWDI 612
D +WD+
Sbjct: 207 GSADRTVKLWDL 218
Score = 59 (25.8 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 17/61 (27%), Positives = 32/61 (52%)
Query: 397 CCAFNANGTVFVTGSSDTLARVWN--ACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGC 454
C AF+ +G + S D+ ++W+ A K T+ + + ++V+ H N+ Y+ SG
Sbjct: 152 CLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTS-AVNVVQFHPNE--YLLASGS 208
Query: 455 A 455
A
Sbjct: 209 A 209
Score = 47 (21.6 bits), Expect = 3.8e-07, Sum P(3) = 3.8e-07
Identities = 13/57 (22%), Positives = 27/57 (47%)
Query: 375 DAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQ 431
D +AG+ + +S + + F+ N + +GS+D ++W+ K N S +
Sbjct: 175 DLIAGKMITEFTS---HTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSE 228
Score = 45 (20.9 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 15/74 (20%), Positives = 28/74 (37%)
Query: 929 EESGRSLLNEQRKHSKGKGISLDDSEDVTKLDTPESHVNAGIRRLVLKLPVRDSNKHELQ 988
E RS +E K K + + ED ++ P S ++ + P +H
Sbjct: 360 EGERRSPSSEDEKEDKESSAEITNPEDYKEIFQPRSVISRTPPKTTEPFPA--PLEHSFS 417
Query: 989 ERTSDKCNQLVSVI 1002
E +K +V ++
Sbjct: 418 ESVLEKPGPVVKIV 431
Score = 41 (19.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 1479 GPWIT-VKGNIRAVEFCKVESLEYATASGSGDSCCKM 1514
G IT + AV + EY ASGS D K+
Sbjct: 179 GKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKL 215
Score = 41 (19.5 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 381 NMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVW 419
NM SS ++ + FN +G+ +GS +TL RV+
Sbjct: 222 NMIGSSEG--ETGVVRSVLFNPDGSCLYSGSENTL-RVY 257
Score = 38 (18.4 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 697 SAMIPYPEPYQTMYQQR 713
SA I PE Y+ ++Q R
Sbjct: 378 SAEITNPEDYKEIFQPR 394
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 146 (56.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 37/117 (31%), Positives = 58/117 (49%)
Query: 242 HRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXX 301
H N V CA F GR +++ SDD+ VK+W + C+ S H G +T
Sbjct: 144 HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIA 203
Query: 302 XXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D ++VW + + + H+AAV A++F P G+ Y L+++S D T +I D
Sbjct: 204 AAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPS-GN-Y-LVTASSDSTLKILD 257
Score = 124 (48.7 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 33/129 (25%), Positives = 58/129 (44%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ +GHR+AV F + + + +GS D + +W M+ GH+ +T
Sbjct: 13 RHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPS 72
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPIS-VLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D +R+W +P+ S V R HTA V ++ F G + +++SDD T +
Sbjct: 73 GHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCS-DGQSF--VTASDDKTVK 128
Query: 356 IWDARYSQF 364
+W +F
Sbjct: 129 VWSTHRQKF 137
Score = 89 (36.4 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 21/65 (32%), Positives = 31/65 (47%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKT 607
+S D R +++A D + +W+ VHS H +D HP IA +AG D
Sbjct: 153 FSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIA-AAGMDNTV 211
Query: 608 IVWDI 612
VWD+
Sbjct: 212 KVWDV 216
Score = 65 (27.9 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 26/111 (23%), Positives = 45/111 (40%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWE 614
+ AA MD + VW+ L+ H+ + L HP + ++A D + D+ E
Sbjct: 202 IAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHP-SGNYLVTASSDSTLKILDLME 260
Query: 615 GIPIRIYEISRFRDGASIILSDDVGQLYILNTGQGESQKDAKYDQFFLGDY 665
G +Y + + A+ + G+ Y + G E K F + DY
Sbjct: 261 GR--LLYTLHGHQGPATTVAFSRTGE-YFASGGSDEQVMVWK-SNFDIVDY 307
Score = 57 (25.1 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 28/116 (24%), Positives = 51/116 (43%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN + + +++ A D + + + +G L+++L GH + A S G
Sbjct: 232 VNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFA-SGG 290
Query: 603 YDGKTIVW----DIWE-GIPIRIYEISRFRDGASIILSDDVGQLYILNTGQGESQK 653
D + +VW DI + G +R+ R +S L + V L + G+G SQ+
Sbjct: 291 SDEQVMVWKSNFDIVDYGEVLRVQRPPATRASSSGTLPE-VDPL--VPPGRGRSQE 343
Score = 50 (22.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 399 AFNANGTVFVTGSSDTLARVWNACKPNTDDSD 430
AF+ G F +G SD VW K N D D
Sbjct: 278 AFSRTGEYFASGGSDEQVMVW---KSNFDIVD 306
Score = 50 (22.7 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 17/65 (26%), Positives = 28/65 (43%)
Query: 397 CCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHE-IDVLSGHENDVNYVQF--SG 453
C F+ +G + V+ S D ++W D+ + E + H V YV F SG
Sbjct: 150 CAKFSPDGRLIVSASDDKTVKLW----------DKTSRECVHSYCEHGGFVTYVDFHPSG 199
Query: 454 CAVAS 458
+A+
Sbjct: 200 TCIAA 204
Score = 43 (20.2 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 30/132 (22%), Positives = 54/132 (40%)
Query: 1404 TVGLRSTRNRRT-SYLFCDSSPIDRRKTHQSLRKGSWLMLSTHEEGSRYIPQLGDEVVYL 1462
TV + R R + S+ ++ H S G++L+ ++ + + + + ++Y
Sbjct: 210 TVKVWDVRTHRLLQHYQLHSAAVNALSFHPS---GNYLVTASSDSTLKILDLMEGRLLYT 266
Query: 1463 RQGHQ------------EYINYSGSRE-VGPWITVKGNIRAVEFCKVESLEYATASGSGD 1509
GHQ EY GS E V W K N V++ +V ++ A+ +
Sbjct: 267 LHGHQGPATTVAFSRTGEYFASGGSDEQVMVW---KSNFDIVDYGEVLRVQRPPATRASS 323
Query: 1510 SCCKMTLKFIDP 1521
S TL +DP
Sbjct: 324 SG---TLPEVDP 332
>MGI|MGI:101848 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein),
beta 5" species:10090 "Mus musculus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0032794 "GTPase activating protein binding" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0044297 "cell body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:U69145 InterPro:IPR001632 MGI:MGI:101848
GO:GO:0005886 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ EMBL:L34290 EMBL:BC016135
IPI:IPI00127930 IPI:IPI00378017 PIR:A54969 RefSeq:NP_034443.1
RefSeq:NP_619733.1 UniGene:Mm.17604 PDB:2PBI PDBsum:2PBI
ProteinModelPortal:P62881 SMR:P62881 DIP:DIP-264N IntAct:P62881
STRING:P62881 PhosphoSite:P62881 PaxDb:P62881 PRIDE:P62881
Ensembl:ENSMUST00000076889 GeneID:14697 KEGG:mmu:14697
UCSC:uc009qry.1 InParanoid:P62881 EvolutionaryTrace:P62881
NextBio:286651 Bgee:P62881 Genevestigator:P62881
GermOnline:ENSMUSG00000032192 Uniprot:P62881
Length = 395
Score = 132 (51.5 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 34/126 (26%), Positives = 50/126 (39%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT--DXXXX 294
K V H N + F S ++T S D +W +E+ L S GH D+ D
Sbjct: 189 KSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPS 248
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D VW + G + H + V ++ + P G + S SDD TC
Sbjct: 249 ETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPS-GDAFA--SGSDDATC 305
Query: 355 RIWDAR 360
R++D R
Sbjct: 306 RLYDLR 311
Score = 79 (32.9 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 22/69 (31%), Positives = 28/69 (40%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G + + +SL R + A D I VW+ GS V L GH L V P S
Sbjct: 327 GASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFC-SG 385
Query: 602 GYDGKTIVW 610
+D VW
Sbjct: 386 SWDHTLRVW 394
Score = 73 (30.8 bits), Expect = 2.5e-05, Sum P(4) = 2.5e-05
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 326 HTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPS 385
HT ++A +F+ S Q+L++S DGTC +WD Q + +D + ++APS
Sbjct: 194 HTNYLSACSFT---NSDMQILTASGDGTCALWDVESGQLLQSFH-GHGADVLC-LDLAPS 248
Query: 386 SS 387
+
Sbjct: 249 ET 250
Score = 62 (26.9 bits), Expect = 2.5e-05, Sum P(4) = 2.5e-05
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 233 MQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMET 274
M+ + ++GH N V C + + R +++ S D V +W T
Sbjct: 95 MKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFT 136
Score = 58 (25.5 bits), Expect = 2.5e-05, Sum P(4) = 2.5e-05
Identities = 19/57 (33%), Positives = 26/57 (45%)
Query: 404 GTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQF--SGCAVAS 458
G FV+G D A VW+ + + HE+DVN V++ SG A AS
Sbjct: 251 GNTFVSGGCDKKAMVWDM---------RSGQCVQAFETHESDVNSVRYYPSGDAFAS 298
Score = 53 (23.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS--GCAVA 457
F+ +G + G +D VW+ K + + +L GHEN V+ ++ S G A
Sbjct: 333 FSLSGRLLFAGYNDYTINVWDVLKGS---------RVSILFGHENRVSTLRVSPDGTAFC 383
Query: 458 S 458
S
Sbjct: 384 S 384
Score = 47 (21.6 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 403 NGTVFVTGSSDTLARVW 419
+GT F +GS D RVW
Sbjct: 378 DGTAFCSGSWDHTLRVW 394
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 152 (58.6 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 36/124 (29%), Positives = 54/124 (43%)
Query: 236 IKRVRGHRNAVYCAI-FDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
++ + GH+ A C++ F G +V +GS D +K+W + C+ RGH +
Sbjct: 98 LRTLMGHK-ANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D +++W L G +S GHT V + F P Y L S S D T
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE---YLLASGSSDRTI 213
Query: 355 RIWD 358
R WD
Sbjct: 214 RFWD 217
Score = 134 (52.2 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 33/129 (25%), Positives = 56/129 (43%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
+ K I + GH + V + ++ GS +++W +E A L + GH+ +I
Sbjct: 50 INKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANIC 109
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D I++W + + RGH+ AV + FSP G L S++
Sbjct: 110 SLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGK--WLASAA 166
Query: 350 DDGTCRIWD 358
DD T ++WD
Sbjct: 167 DDHTVKLWD 175
Score = 133 (51.9 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 34/126 (26%), Positives = 52/126 (41%)
Query: 236 IKRVRGHRNAVYCAIFDR-SGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
++ + H + V + + SGR + TG DD V +WS+ C+ S GH +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
IRVW L + L GH A + ++ F P G + S S D
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY-GEF--VASGSQDTNI 129
Query: 355 RIWDAR 360
++WD R
Sbjct: 130 KLWDIR 135
Score = 83 (34.3 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 19/73 (26%), Positives = 39/73 (53%)
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
+ V + +S D +++ +A D + +W+ G ++ GHT V++ HP N + ++
Sbjct: 148 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP-NEYL-LA 205
Query: 601 AGYDGKTI-VWDI 612
+G +TI WD+
Sbjct: 206 SGSSDRTIRFWDL 218
Score = 51 (23.0 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 15/64 (23%), Positives = 29/64 (45%)
Query: 392 SHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHE--IDVLSGHENDVNYV 449
S + C F+ +G + + D ++W+ S+ P H ++V+ H N+ Y+
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM-SEFPGHTGPVNVVEFHPNE--YL 203
Query: 450 QFSG 453
SG
Sbjct: 204 LASG 207
Score = 47 (21.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 14/47 (29%), Positives = 21/47 (44%)
Query: 375 DAVAGRNMAP-SSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
D AG+ M+ GP + F+ N + +GSSD R W+
Sbjct: 175 DLTAGKMMSEFPGHTGP----VNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 41 (19.5 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 1486 GNIRAVEFCKVESLEYATASGSGDSCCKMTLKFID 1520
G + VEF EY ASGS D T++F D
Sbjct: 190 GPVNVVEF---HPNEYLLASGSSDR----TIRFWD 217
>DICTYBASE|DDB_G0277143 [details] [associations]
symbol:gpbA "G protein b" species:44689
"Dictyostelium discoideum" [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0031982 "vesicle" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0032320 "positive regulation
of Ras GTPase activity" evidence=IMP] [GO:0008047 "enzyme activator
activity" evidence=TAS] [GO:0031682 "G-protein gamma-subunit
binding" evidence=IDA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030826 "regulation
of cGMP biosynthetic process" evidence=TAS] [GO:0007190 "activation
of adenylate cyclase activity" evidence=TAS] [GO:0046578
"regulation of Ras protein signal transduction" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043327 "chemotaxis to cAMP"
evidence=IMP] [GO:0043326 "chemotaxis to folate" evidence=IMP]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP;TAS] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006935 "chemotaxis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277143 InterPro:IPR001632
GO:GO:0045335 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0019933 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007190 GO:GO:0007188
GenomeReviews:CM000151_GR GO:GO:0043326 GO:GO:0004871
EMBL:AAFI02000019 GO:GO:0031152 PRINTS:PR00319 GO:GO:0005834
GO:GO:0043327 GO:GO:0030826 GO:GO:0032320 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X73641 PIR:A47370 RefSeq:XP_642759.1
ProteinModelPortal:P36408 SMR:P36408 IntAct:P36408 STRING:P36408
PRIDE:P36408 EnsemblProtists:DDB0252679 GeneID:8620948
KEGG:ddi:DDB_G0277143 OMA:YTHDNIL ProtClustDB:CLSZ2430844
GO:GO:0031682 Uniprot:P36408
Length = 347
Score = 130 (50.8 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 30/130 (23%), Positives = 53/130 (40%)
Query: 231 QKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
Q ++ + + H + C F + R ++T S D +W +E + H GD+
Sbjct: 138 QPIRVCRELNSHTGYLSCCRF-LNDRQIVTSSGDMTCILWDVENGTKITEFSDHNGDVMS 196
Query: 291 XXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSD 350
D ++W L G + GH A + A+ + P G + + SD
Sbjct: 197 VSVSPDKNYFISGACDATAKLWDLRSGKCVQTFTGHEADINAVQYFPN-GLSFG--TGSD 253
Query: 351 DGTCRIWDAR 360
D +CR++D R
Sbjct: 254 DASCRLFDIR 263
Score = 79 (32.9 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 20/69 (28%), Positives = 29/69 (42%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G+ + +S RF+ A D VW+ G V SLTGH L V P + +
Sbjct: 279 GITSVGFSFSGRFLFAGYDDFTCNVWDTLKGERVLSLTGHGNRVSCLGV-PTDGMALCTG 337
Query: 602 GYDGKTIVW 610
+D +W
Sbjct: 338 SWDSLLKIW 346
Score = 53 (23.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 14/61 (22%), Positives = 27/61 (44%)
Query: 359 ARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARV 418
A Y F+ ++ D + G + + G +++ C +G TGS D+L ++
Sbjct: 294 AGYDDFTCNVW-----DTLKGERVLSLTGHG---NRVSCLGVPTDGMALCTGSWDSLLKI 345
Query: 419 W 419
W
Sbjct: 346 W 346
Score = 37 (18.1 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 1015 GNGNRVSYVG 1024
G+GNRVS +G
Sbjct: 317 GHGNRVSCLG 326
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 154 (59.3 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 38/121 (31%), Positives = 56/121 (46%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH +Y F R GR + +GS DR V++W +E L +G +T
Sbjct: 386 GHEQDIYSLDFARDGRTIASGSGDRTVRLWDIENGTALTVFTIEDG-VTTVAISPDTKYV 444
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRG---HTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIW 357
D +RVW L G P+ L G H +V ++AFSP G L++ S D T ++W
Sbjct: 445 AAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPN-GR--DLVTGSLDKTIKLW 501
Query: 358 D 358
+
Sbjct: 502 E 502
Score = 128 (50.1 bits), Expect = 5.1e-08, Sum P(3) = 5.1e-08
Identities = 29/108 (26%), Positives = 50/108 (46%)
Query: 251 FDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIR 310
F G+Y+ TG++D+ +++W + T GHE DI D +R
Sbjct: 354 FSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVR 413
Query: 311 VWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
+W + +G ++V VT +A SP + Y + + S D + R+WD
Sbjct: 414 LWDIENGTALTVFTIEDG-VTTVAISP--DTKY-VAAGSLDKSVRVWD 457
Score = 75 (31.5 bits), Expect = 5.1e-08, Sum P(3) = 5.1e-08
Identities = 18/63 (28%), Positives = 29/63 (46%)
Query: 389 GPQSHQ--IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHE---IDVLSGHE 443
GP H+ ++ AF+ NG VTGS D ++W P + +Q + + GH
Sbjct: 469 GPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHR 528
Query: 444 NDV 446
+ V
Sbjct: 529 DFV 531
Score = 60 (26.2 bits), Expect = 5.1e-08, Sum P(3) = 5.1e-08
Identities = 16/60 (26%), Positives = 26/60 (43%)
Query: 551 DNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVW 610
DN++V++ D + W+ GS L GH S + P A +G D + +W
Sbjct: 539 DNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFATGSG-DMRARIW 597
Score = 55 (24.4 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 391 QSHQ--IFCCAFNANGTVFVTGSSDTLARVWN 420
Q H+ + A + G F TGS D AR+W+
Sbjct: 567 QGHKNSVISVAPSPTGGFFATGSGDMRARIWS 598
>DICTYBASE|DDB_G0278353 [details] [associations]
symbol:smu1 "suppressor of mec-8 and unc-52-like
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
dictyBase:DDB_G0278353 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P26449
PROSITE:PS50897 KO:K13111 OMA:NGHWDTV RefSeq:XP_642306.2
ProteinModelPortal:Q54Y96 EnsemblProtists:DDB0233537 GeneID:8621512
KEGG:ddi:DDB_G0278353 ProtClustDB:CLSZ2430773 Uniprot:Q54Y96
Length = 530
Score = 163 (62.4 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 43/181 (23%), Positives = 77/181 (42%)
Query: 242 HRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCR-GHEGDITDXXXXXXXXXX 300
H +A+ C F + G ++ TGS D +K+W +++ CL H +T
Sbjct: 274 HDDAILCIAFSKDGEFLATGSLDNKIKVWQIKSGKCLRKFEPAHTNGVTCLQFSRNSTQI 333
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
D +++ L G + + RGH + V F+ V +S S DG +IWDA+
Sbjct: 334 LSGSFDSSLKIHGLKSGKALKIFRGHQSFVNDCCFNHDEDRV---ISCSSDGKIKIWDAK 390
Query: 361 YSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
S I P+ V R+++ S + F N++ V+ S T+++ +
Sbjct: 391 SSDCLQTI---TPTSVVTVRDISIRSITILLKNPEFLLVCNSSQISIVSMKSQTISKTFT 447
Query: 421 A 421
+
Sbjct: 448 S 448
>FB|FBgn0038617 [details] [associations]
symbol:CG12333 species:7227 "Drosophila melanogaster"
[GO:0046331 "lateral inhibition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046331 HSSP:P16649
GeneTree:ENSGT00640000091456 OMA:TGLPRDM EMBL:AY094717
RefSeq:NP_650723.1 UniGene:Dm.12926 SMR:Q9VE73 IntAct:Q9VE73
MINT:MINT-1593181 EnsemblMetazoa:FBtr0083655 GeneID:42218
KEGG:dme:Dmel_CG12333 UCSC:CG12333-RA FlyBase:FBgn0038617
InParanoid:Q9VE73 OrthoDB:EOG434TNF GenomeRNAi:42218 NextBio:827735
Uniprot:Q9VE73
Length = 487
Score = 162 (62.1 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 39/121 (32%), Positives = 58/121 (47%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH + V A + S +ITGS DR +W +ET L GH+ ++T
Sbjct: 276 GHLSVVVAADWLSSMDQIITGSWDRTAILWDVETGLPLQPLTGHDHELTHVSAHPTQRLV 335
Query: 301 XXXXXDCIIRVWRLPDGLP-ISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA 359
D R+W + +P +SV +GHT VT+ F+ R V +S SDD T ++W+
Sbjct: 336 VTASRDTTFRLWDFREAIPAVSVFQGHTETVTSSVFA-RDDKV---VSGSDDRTIKVWEL 391
Query: 360 R 360
R
Sbjct: 392 R 392
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 139 (54.0 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 29/97 (29%), Positives = 46/97 (47%)
Query: 264 DRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVL 323
D+ V++WS + + GH G + D +++W L G L
Sbjct: 1 DKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKEL 60
Query: 324 RGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
RGHT ++T++AFSP G + S+S D + R+WD R
Sbjct: 61 RGHTDSITSLAFSPDSGLI---ASASMDNSVRVWDIR 94
Score = 107 (42.7 bits), Expect = 0.00015, P = 0.00015
Identities = 20/82 (24%), Positives = 35/82 (42%)
Query: 231 QKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
Q+ +++ GHR V F +G+Y+ + +D+ +K+W + + RGH IT
Sbjct: 10 QQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITS 69
Query: 291 XXXXXXXXXXXXXXXDCIIRVW 312
D +RVW
Sbjct: 70 LAFSPDSGLIASASMDNSVRVW 91
>UNIPROTKB|O14775 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0003924 "GTPase activity" evidence=NAS]
[GO:0004871 "signal transducer activity" evidence=NAS] [GO:0007165
"signal transduction" evidence=NAS] [GO:0005834 "heterotrimeric
G-protein complex" evidence=NAS] [GO:0006184 "GTP catabolic
process" evidence=NAS] Reactome:REACT_13685 Reactome:REACT_604
Reactome:REACT_111217 Reactome:REACT_15518 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005634
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
Pathway_Interaction_DB:txa2pathway
Pathway_Interaction_DB:cone_pathway
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
GO:GO:0005834 HOGENOM:HOG000176356 HOVERGEN:HBG000188
InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE
EMBL:AF017656 EMBL:AL117471 EMBL:AF501885 EMBL:AF300650
EMBL:BC013997 IPI:IPI00151607 IPI:IPI00745232 IPI:IPI00967497
PIR:T17256 RefSeq:NP_006569.1 RefSeq:NP_057278.2 UniGene:Hs.155090
ProteinModelPortal:O14775 SMR:O14775 IntAct:O14775
MINT:MINT-1399610 STRING:O14775 PhosphoSite:O14775 PaxDb:O14775
PRIDE:O14775 DNASU:10681 Ensembl:ENST00000261837
Ensembl:ENST00000358784 Ensembl:ENST00000396335 GeneID:10681
KEGG:hsa:10681 UCSC:uc002abr.1 UCSC:uc002abs.1 CTD:10681
GeneCards:GC15M052413 HGNC:HGNC:4401 HPA:CAB032353 HPA:HPA041942
MIM:604447 neXtProt:NX_O14775 PharmGKB:PA28780 InParanoid:O14775
OrthoDB:EOG4XWFXZ PhylomeDB:O14775 ChiTaRS:GNB5 GenomeRNAi:10681
NextBio:40605 ArrayExpress:O14775 Bgee:O14775 CleanEx:HS_GNB5
Genevestigator:O14775 GermOnline:ENSG00000069966 Uniprot:O14775
Length = 395
Score = 131 (51.2 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 33/126 (26%), Positives = 50/126 (39%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT--DXXXX 294
K V H N + F S ++T S D +W +E+ L S GH D+ D
Sbjct: 189 KSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPS 248
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D VW + G + H + + ++ + P G + S SDD TC
Sbjct: 249 ETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPS-GDAFA--SGSDDATC 305
Query: 355 RIWDAR 360
R++D R
Sbjct: 306 RLYDLR 311
Score = 79 (32.9 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 22/69 (31%), Positives = 28/69 (40%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G + + +SL R + A D I VW+ GS V L GH L V P S
Sbjct: 327 GASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFC-SG 385
Query: 602 GYDGKTIVW 610
+D VW
Sbjct: 386 SWDHTLRVW 394
Score = 73 (30.8 bits), Expect = 3.1e-05, Sum P(4) = 3.1e-05
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 326 HTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPS 385
HT ++A +F+ S Q+L++S DGTC +WD Q + +D + ++APS
Sbjct: 194 HTNYLSACSFT---NSDMQILTASGDGTCALWDVESGQLLQSFH-GHGADVLC-LDLAPS 248
Query: 386 SS 387
+
Sbjct: 249 ET 250
Score = 62 (26.9 bits), Expect = 3.1e-05, Sum P(4) = 3.1e-05
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 233 MQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMET 274
M+ + ++GH N V C + + R +++ S D V +W T
Sbjct: 95 MKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFT 136
Score = 57 (25.1 bits), Expect = 3.1e-05, Sum P(4) = 3.1e-05
Identities = 18/57 (31%), Positives = 26/57 (45%)
Query: 404 GTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQF--SGCAVAS 458
G FV+G D A VW+ + + HE+D+N V++ SG A AS
Sbjct: 251 GNTFVSGGCDKKAMVWDM---------RSGQCVQAFETHESDINSVRYYPSGDAFAS 298
Score = 53 (23.7 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS--GCAVA 457
F+ +G + G +D VW+ K + + +L GHEN V+ ++ S G A
Sbjct: 333 FSLSGRLLFAGYNDYTINVWDVLKGS---------RVSILFGHENRVSTLRVSPDGTAFC 383
Query: 458 S 458
S
Sbjct: 384 S 384
Score = 47 (21.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 403 NGTVFVTGSSDTLARVW 419
+GT F +GS D RVW
Sbjct: 378 DGTAFCSGSWDHTLRVW 394
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 161 (61.7 bits), Expect = 6.4e-08, Sum P(3) = 6.4e-08
Identities = 42/133 (31%), Positives = 64/133 (48%)
Query: 236 IKRVR-GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
I+RV GHR AV FD RY+++ S DR +K+WSM+T + + GH I
Sbjct: 337 IRRVLVGHRAAVNVVDFD--DRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIA--CLQ 392
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D IR+W + G+ + VL GH V I F + +++S + DG
Sbjct: 393 YRGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEK-----RIVSGAYDGKI 447
Query: 355 RIWDARYSQFSPR 367
++WD + + PR
Sbjct: 448 KVWDLQ-AALDPR 459
Score = 127 (49.8 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 33/130 (25%), Positives = 56/130 (43%)
Query: 233 MQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
++ ++ + GHR + C + GR V++GS D +++W + + CL GHE +
Sbjct: 375 LEFVRTLAGHRRGIACLQY--RGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVR--C 430
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSV----YQLLSS 348
D I+VW L L L + + + R + +Q++SS
Sbjct: 431 IRFDEKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVSS 490
Query: 349 SDDGTCRIWD 358
S D T IWD
Sbjct: 491 SHDDTILIWD 500
Score = 126 (49.4 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 38/127 (29%), Positives = 57/127 (44%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH +V C +D R +I+GS D V++W +ET C+ + H +
Sbjct: 260 GHTGSVLCLQYDN--RVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFANGIMVT 317
Query: 301 XXXXXDCIIRVWRL--PDGLPIS-VLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIW 357
D I VW + P + I VL GH AAV + F R Y ++S+S D T ++W
Sbjct: 318 CSK--DRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDR----Y-IVSASGDRTIKVW 370
Query: 358 DARYSQF 364
+F
Sbjct: 371 SMDTLEF 377
Score = 102 (41.0 bits), Expect = 8.1e-07, Sum P(4) = 8.1e-07
Identities = 31/127 (24%), Positives = 49/127 (38%)
Query: 232 KMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDX 291
KM I + VYC +D +++G D +KIW + C GH G +
Sbjct: 211 KMTRINCQSENSKGVYCLQYDDDK--IVSGLRDNTIKIWDRKDYSCSRILSGHTGSVL-- 266
Query: 292 XXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDD 351
D +RVW + G I L H AV + F+ + +++ S D
Sbjct: 267 CLQYDNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFA---NGI--MVTCSKD 321
Query: 352 GTCRIWD 358
+ +WD
Sbjct: 322 RSIAVWD 328
Score = 94 (38.1 bits), Expect = 8.1e-07, Sum P(4) = 8.1e-07
Identities = 23/80 (28%), Positives = 39/80 (48%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN++ D+R++++A D I VW+ V +L GH L + R+ +S
Sbjct: 348 VNVV--DFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQ---YRGRLVVSGS 402
Query: 603 YDGKTIVWDIWEGIPIRIYE 622
D +WDI G+ +R+ E
Sbjct: 403 SDNTIRLWDIHSGVCLRVLE 422
Score = 80 (33.2 bits), Expect = 1.8e-05, Sum P(4) = 1.8e-05
Identities = 36/148 (24%), Positives = 56/148 (37%)
Query: 479 FCHDNIVTCSRDGSAIIW---IPRS---RR---SHPKAAR---WTQAYHLKVXXXXXXX- 525
F + +VTCS+D S +W PR RR H A + Y +
Sbjct: 310 FANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKV 369
Query: 526 -XXXXXXXXXXILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTES 584
+ RG+ + + R V++ D I +W+ G + L GH E
Sbjct: 370 WSMDTLEFVRTLAGHRRGIACLQYR--GRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEEL 427
Query: 585 TYVLDVHPFNPRIAMSAGYDGKTIVWDI 612
+ F+ + +S YDGK VWD+
Sbjct: 428 VRCIR---FDEKRIVSGAYDGKIKVWDL 452
Score = 52 (23.4 bits), Expect = 6.4e-08, Sum P(3) = 6.4e-08
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 1500 EYATASGSGDSCCKMTLKFID-PTSSVSNMTFRLTLPEVTGFPDFLVERTRFDAAIQRNW 1558
++ S S D + F+D P S + + T R TLPE+ + F+ A +R
Sbjct: 484 DFQIVSSSHDDTI-LIWDFLDAPPSGLPSSTNRATLPELPNQAAVARAQMLFEMAARREI 542
Query: 1559 TCRDK 1563
RD+
Sbjct: 543 ERRDR 547
Score = 49 (22.3 bits), Expect = 6.4e-08, Sum P(3) = 6.4e-08
Identities = 17/69 (24%), Positives = 34/69 (49%)
Query: 65 CHRTYGQFWNELLEHQLLPRRYHAWYSRSGLPSGDENDDGMSFPLSYNKLVERYPH---I 121
C GQ W +L+E + R W+ S D+ + +S +S ++ E++ + I
Sbjct: 116 CALARGQHWKKLIEKNV--RSDSLWWGLSEKRQWDKFLN-ISRDMSVRRICEKFNYDVNI 172
Query: 122 EKDHLVKLL 130
++D L +L+
Sbjct: 173 KRDKLDQLI 181
Score = 49 (22.3 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 18/76 (23%), Positives = 32/76 (42%)
Query: 551 DNRFVLAAIMDCRICVWN---AADGSLVHS------LTGHTESTYVLDVHPFNPRIAMSA 601
D + +++ D +I VW+ A D + S L HT + L F +S+
Sbjct: 434 DEKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQFDDFQ---IVSS 490
Query: 602 GYDGKTIVWDIWEGIP 617
+D ++WD + P
Sbjct: 491 SHDDTILIWDFLDAPP 506
Score = 38 (18.4 bits), Expect = 1.8e-05, Sum P(4) = 1.8e-05
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 1034 CGLMERRGRGQFDKLEDYLNLSNGYKDGKIRW 1065
C L++ GR + +D+ +S+ + D + W
Sbjct: 468 CSLVQHTGRVFRLQFDDFQIVSSSHDDTILIW 499
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 161 (61.7 bits), Expect = 6.4e-08, Sum P(3) = 6.4e-08
Identities = 42/133 (31%), Positives = 64/133 (48%)
Query: 236 IKRVR-GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
I+RV GHR AV FD RY+++ S DR +K+WSM+T + + GH I
Sbjct: 337 IRRVLVGHRAAVNVVDFD--DRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIA--CLQ 392
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D IR+W + G+ + VL GH V I F + +++S + DG
Sbjct: 393 YRGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEK-----RIVSGAYDGKI 447
Query: 355 RIWDARYSQFSPR 367
++WD + + PR
Sbjct: 448 KVWDLQ-AALDPR 459
Score = 127 (49.8 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 33/130 (25%), Positives = 56/130 (43%)
Query: 233 MQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
++ ++ + GHR + C + GR V++GS D +++W + + CL GHE +
Sbjct: 375 LEFVRTLAGHRRGIACLQY--RGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVR--C 430
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSV----YQLLSS 348
D I+VW L L L + + + R + +Q++SS
Sbjct: 431 IRFDEKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVSS 490
Query: 349 SDDGTCRIWD 358
S D T IWD
Sbjct: 491 SHDDTILIWD 500
Score = 126 (49.4 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 38/127 (29%), Positives = 57/127 (44%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH +V C +D R +I+GS D V++W +ET C+ + H +
Sbjct: 260 GHTGSVLCLQYDN--RVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFANGIMVT 317
Query: 301 XXXXXDCIIRVWRL--PDGLPIS-VLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIW 357
D I VW + P + I VL GH AAV + F R Y ++S+S D T ++W
Sbjct: 318 CSK--DRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDR----Y-IVSASGDRTIKVW 370
Query: 358 DARYSQF 364
+F
Sbjct: 371 SMDTLEF 377
Score = 102 (41.0 bits), Expect = 8.1e-07, Sum P(4) = 8.1e-07
Identities = 31/127 (24%), Positives = 49/127 (38%)
Query: 232 KMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDX 291
KM I + VYC +D +++G D +KIW + C GH G +
Sbjct: 211 KMTRINCQSENSKGVYCLQYDDDK--IVSGLRDNTIKIWDRKDYSCSRILSGHTGSVL-- 266
Query: 292 XXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDD 351
D +RVW + G I L H AV + F+ + +++ S D
Sbjct: 267 CLQYDNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFA---NGI--MVTCSKD 321
Query: 352 GTCRIWD 358
+ +WD
Sbjct: 322 RSIAVWD 328
Score = 94 (38.1 bits), Expect = 8.1e-07, Sum P(4) = 8.1e-07
Identities = 23/80 (28%), Positives = 39/80 (48%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN++ D+R++++A D I VW+ V +L GH L + R+ +S
Sbjct: 348 VNVV--DFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQ---YRGRLVVSGS 402
Query: 603 YDGKTIVWDIWEGIPIRIYE 622
D +WDI G+ +R+ E
Sbjct: 403 SDNTIRLWDIHSGVCLRVLE 422
Score = 80 (33.2 bits), Expect = 1.8e-05, Sum P(4) = 1.8e-05
Identities = 36/148 (24%), Positives = 56/148 (37%)
Query: 479 FCHDNIVTCSRDGSAIIW---IPRS---RR---SHPKAAR---WTQAYHLKVXXXXXXX- 525
F + +VTCS+D S +W PR RR H A + Y +
Sbjct: 310 FANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKV 369
Query: 526 -XXXXXXXXXXILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTES 584
+ RG+ + + R V++ D I +W+ G + L GH E
Sbjct: 370 WSMDTLEFVRTLAGHRRGIACLQYR--GRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEEL 427
Query: 585 TYVLDVHPFNPRIAMSAGYDGKTIVWDI 612
+ F+ + +S YDGK VWD+
Sbjct: 428 VRCIR---FDEKRIVSGAYDGKIKVWDL 452
Score = 52 (23.4 bits), Expect = 6.4e-08, Sum P(3) = 6.4e-08
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 1500 EYATASGSGDSCCKMTLKFID-PTSSVSNMTFRLTLPEVTGFPDFLVERTRFDAAIQRNW 1558
++ S S D + F+D P S + + T R TLPE+ + F+ A +R
Sbjct: 484 DFQIVSSSHDDTI-LIWDFLDAPPSGLPSSTNRATLPELPNQAAVARAQMLFEMAARREI 542
Query: 1559 TCRDK 1563
RD+
Sbjct: 543 ERRDR 547
Score = 49 (22.3 bits), Expect = 6.4e-08, Sum P(3) = 6.4e-08
Identities = 17/69 (24%), Positives = 34/69 (49%)
Query: 65 CHRTYGQFWNELLEHQLLPRRYHAWYSRSGLPSGDENDDGMSFPLSYNKLVERYPH---I 121
C GQ W +L+E + R W+ S D+ + +S +S ++ E++ + I
Sbjct: 116 CALARGQHWKKLIEKNV--RSDSLWWGLSEKRQWDKFLN-ISRDMSVRRICEKFNYDVNI 172
Query: 122 EKDHLVKLL 130
++D L +L+
Sbjct: 173 KRDKLDQLI 181
Score = 49 (22.3 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 18/76 (23%), Positives = 32/76 (42%)
Query: 551 DNRFVLAAIMDCRICVWN---AADGSLVHS------LTGHTESTYVLDVHPFNPRIAMSA 601
D + +++ D +I VW+ A D + S L HT + L F +S+
Sbjct: 434 DEKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQFDDFQ---IVSS 490
Query: 602 GYDGKTIVWDIWEGIP 617
+D ++WD + P
Sbjct: 491 SHDDTILIWDFLDAPP 506
Score = 38 (18.4 bits), Expect = 1.8e-05, Sum P(4) = 1.8e-05
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 1034 CGLMERRGRGQFDKLEDYLNLSNGYKDGKIRW 1065
C L++ GR + +D+ +S+ + D + W
Sbjct: 468 CSLVQHTGRVFRLQFDDFQIVSSSHDDTILIW 499
>UNIPROTKB|O14727 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0006309
"apoptotic DNA fragmentation" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000166 "nucleotide binding" evidence=TAS]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=NAS] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IDA;TAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0043293
"apoptosome" evidence=IDA;TAS] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_578 InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 Pathway_Interaction_DB:p75ntrpathway GO:GO:0007399
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000166 DrugBank:DB00171 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
Pathway_Interaction_DB:caspase_pathway EMBL:CH471054 GO:GO:0043531
GO:GO:0001843 GO:GO:0097193 GO:GO:0006309 GO:GO:0008656
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 EMBL:AF013263 EMBL:AJ243003
EMBL:AJ243004 EMBL:AJ243005 EMBL:AJ243006 EMBL:AJ243007
EMBL:AJ243008 EMBL:AJ243009 EMBL:AJ243010 EMBL:AJ243011
EMBL:AJ243048 EMBL:AJ243107 EMBL:AF134397 EMBL:AF149794
EMBL:AB007873 EMBL:AB103079 EMBL:BC136531 EMBL:BC136532
EMBL:AJ133643 EMBL:AJ133644 EMBL:AJ133645 EMBL:AF248734
IPI:IPI00023630 IPI:IPI00217460 IPI:IPI00217461 IPI:IPI00217462
IPI:IPI00217463 IPI:IPI00375875 PIR:T03818 RefSeq:NP_001151.1
RefSeq:NP_037361.1 RefSeq:NP_863651.1 RefSeq:NP_863658.1
RefSeq:NP_863659.1 UniGene:Hs.552567 PDB:1C15 PDB:1CWW PDB:1CY5
PDB:1Z6T PDB:2P1H PDB:2YGS PDB:3IZA PDB:3YGS PDBsum:1C15
PDBsum:1CWW PDBsum:1CY5 PDBsum:1Z6T PDBsum:2P1H PDBsum:2YGS
PDBsum:3IZA PDBsum:3YGS ProteinModelPortal:O14727 SMR:O14727
DIP:DIP-27624N IntAct:O14727 MINT:MINT-96751 STRING:O14727
PhosphoSite:O14727 PaxDb:O14727 PRIDE:O14727
Ensembl:ENST00000333991 Ensembl:ENST00000357310
Ensembl:ENST00000359972 Ensembl:ENST00000547045
Ensembl:ENST00000550527 Ensembl:ENST00000551964
Ensembl:ENST00000552268 GeneID:317 KEGG:hsa:317 UCSC:uc001tfy.3
UCSC:uc001tfz.3 UCSC:uc001tga.3 UCSC:uc001tgb.3 UCSC:uc001tgc.3
CTD:317 GeneCards:GC12P099039 HGNC:HGNC:576 HPA:HPA031373
MIM:602233 neXtProt:NX_O14727 PharmGKB:PA24868 HOVERGEN:HBG018730
InParanoid:O14727 KO:K02084 OMA:KVCKNSA PhylomeDB:O14727
Pathway_Interaction_DB:hivnefpathway BindingDB:O14727
ChEMBL:CHEMBL1795093 EvolutionaryTrace:O14727 GenomeRNAi:317
NextBio:1287 PMAP-CutDB:O14727 ArrayExpress:O14727 Bgee:O14727
Genevestigator:O14727 GermOnline:ENSG00000120868 InterPro:IPR017251
PIRSF:PIRSF037646 Uniprot:O14727
Length = 1248
Score = 141 (54.7 bits), Expect = 6.7e-08, Sum P(4) = 6.7e-08
Identities = 35/129 (27%), Positives = 57/129 (44%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT--DX 291
+ + ++ H + V C F R++ T S D+ VKIW+ T + + H +
Sbjct: 648 EKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHF 707
Query: 292 XXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSS-SD 350
DC +++W L + + GHT +V FSP +LL+S S
Sbjct: 708 TNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDD----KLLASCSA 763
Query: 351 DGTCRIWDA 359
DGT ++WDA
Sbjct: 764 DGTLKLWDA 772
Score = 107 (42.7 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 29/132 (21%), Positives = 55/132 (41%)
Query: 231 QKMQNIKR--VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDI 288
+ + N+ R VR H +AVY A F G+ + + D+ ++++ ET L + HE ++
Sbjct: 601 KNITNLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEV 660
Query: 289 TDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSS 348
D +++W G + H+ V F+ S + LL +
Sbjct: 661 LCCAFSTDDRFIATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFT---NSSHHLLLA 717
Query: 349 SDDGTC--RIWD 358
+ C ++WD
Sbjct: 718 TGSSDCFLKLWD 729
Score = 65 (27.9 bits), Expect = 6.7e-08, Sum P(4) = 6.7e-08
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDV 446
F+ +G+ F+T S D R+W K + + E+DV+ EN+V
Sbjct: 890 FSPDGSSFLTSSDDQTIRLWETKKVCKNSAVMLKQEVDVVF-QENEV 935
Score = 65 (27.9 bits), Expect = 6.7e-08, Sum P(4) = 6.7e-08
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 546 IVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPF-NPRIAMSAGYD 604
I ++ D + ++++ D I VWN + L GH E+ V D N R+ +S +D
Sbjct: 1009 IQFTADEKTLISSSDDAEIQVWNWQLDKCIF-LRGHQET--VKDFRLLKNSRL-LSWSFD 1064
Query: 605 GKTIVWDIWEG 615
G VW+I G
Sbjct: 1065 GTVKVWNIITG 1075
Score = 59 (25.8 bits), Expect = 3.9e-07, Sum P(3) = 3.9e-07
Identities = 30/120 (25%), Positives = 55/120 (45%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVH-----SLTGH-TESTYVLDVHPFNP- 595
V +S+D+ + + I +WN ++G L+H S G T +V D+ F+P
Sbjct: 1130 VRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPLSEEGAATHGGWVTDLC-FSPD 1188
Query: 596 -RIAMSAGYDGKTIVWDIWEGIPIRIY-----EISRFR---DGASIILSDDVGQLYILNT 646
++ +SAG G W++ G + + + + D + + D++G LYIL T
Sbjct: 1189 GKMLISAG--GYIKWWNVVTGESSQTFYTNGTNLKKIHVSPDFKTYVTVDNLGILYILQT 1246
Score = 57 (25.1 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 397 CCAFNANGTVFVTGSSDTLARVWN 420
C AF+ + T+ TG + R+WN
Sbjct: 1132 CSAFSVDSTLLATGDDNGEIRIWN 1155
Score = 53 (23.7 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 26/110 (23%), Positives = 39/110 (35%)
Query: 550 LDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDV-HPFNPRIAMSAGYDGKTI 608
L N +L+ D + VWN G+ H + D+ H + SA K
Sbjct: 1053 LKNSRLLSWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFSSTSADKTAK-- 1110
Query: 609 VWDIWEGIPIR-------IYEISRFR-DGASIILSDDVGQLYILNTGQGE 650
+W +P+ S F D + DD G++ I N GE
Sbjct: 1111 IWSFDLLLPLHELRGHNGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGE 1160
Score = 51 (23.0 bits), Expect = 9.6e-06, Sum P(3) = 9.6e-06
Identities = 19/62 (30%), Positives = 27/62 (43%)
Query: 393 HQ--IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQ 450
HQ + C + + T F + S+D A++W+ D P HE L GH V
Sbjct: 1084 HQGTVLSCDISHDATKFSSTSADKTAKIWSF------DLLLPLHE---LRGHNGCVRCSA 1134
Query: 451 FS 452
FS
Sbjct: 1135 FS 1136
Score = 50 (22.7 bits), Expect = 0.00031, Sum P(4) = 0.00031
Identities = 24/110 (21%), Positives = 49/110 (44%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKT 607
+S N + A+ + +WN S V GH + + P S+ D +T
Sbjct: 848 FSPQNHLAVVALSQYCVELWNTDSRSKVADCRGHLSWVHGVMFSPDGSSFLTSS--DDQT 905
Query: 608 I-VWD---IWEGIPIRI-YEISR-FRDGASIILS-DDVGQLYILN--TGQ 648
I +W+ + + + + E+ F++ ++L+ D + +L ++N TGQ
Sbjct: 906 IRLWETKKVCKNSAVMLKQEVDVVFQENEVMVLAVDHIRRLQLINGRTGQ 955
Score = 48 (22.0 bits), Expect = 6.7e-08, Sum P(4) = 6.7e-08
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 944 KGKGISLDDSEDVTKLDTPESHVNAGIRRLVLKLPVRDSNKH 985
+G +S D S D TK + + A I L LP+ + H
Sbjct: 1085 QGTVLSCDISHDATKFSSTSADKTAKIWSFDLLLPLHELRGH 1126
Score = 42 (19.8 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 25/110 (22%), Positives = 43/110 (39%)
Query: 345 LLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANG 404
L S S DGT ++WDA + I + + N+ + CC+++A+G
Sbjct: 758 LASCSADGTLKLWDATSANERKSINVKQ-----FFLNLEDPQE--DMEVIVKCCSWSADG 810
Query: 405 TVFVTGSSDTLARVWNACKPNTDDSDQPNHEI--DVLSGHENDVNYVQFS 452
AR+ A K D + ++ +GH + + Y FS
Sbjct: 811 -----------ARIMVAAKNKIFLFDIHTSGLLGEIHTGHHSTIQYCDFS 849
Score = 42 (19.8 bits), Expect = 0.00090, Sum P(3) = 0.00090
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSL-TGHTESTYVLDVHPFN 594
WS D ++ A + +I +++ L+ + TGH + D P N
Sbjct: 806 WSADGARIMVAAKN-KIFLFDIHTSGLLGEIHTGHHSTIQYCDFSPQN 852
>UNIPROTKB|E2RRL3 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 CTD:84292 KO:K13124
OMA:CKQGAVR EMBL:AAEX03012407 RefSeq:XP_542047.1
ProteinModelPortal:E2RRL3 Ensembl:ENSCAFT00000027316 GeneID:484931
KEGG:cfa:484931 NextBio:20858998 Uniprot:E2RRL3
Length = 315
Score = 130 (50.8 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 35/154 (22%), Positives = 61/154 (39%)
Query: 225 KPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGH 284
KP + +K + + AV F+ G Y +T D+ +K+W+ L + GH
Sbjct: 7 KPRGPELPQKRVKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGH 66
Query: 285 EGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQ 344
++ D D + +W + G + RGH V + F+ +V
Sbjct: 67 GYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEE-ATV-- 123
Query: 345 LLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVA 378
+LS S D + R WD R + P + D ++
Sbjct: 124 ILSGSIDSSIRCWDCRSRRPEPVQTLDEARDGIS 157
Score = 96 (38.9 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 36/143 (25%), Positives = 57/143 (39%)
Query: 236 IKRVRGHRNAVYCAI--FDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
++ GH V A FD S + +G D+ V +W + + + RGH G +
Sbjct: 60 LRTYSGHGYEVLDAAGSFDNSS--LCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQF 117
Query: 294 XXXXXXXXXXXXDCIIRVW----RLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D IR W R P+ P+ L ++++ S +++LS S
Sbjct: 118 NEEATVILSGSIDSSIRCWDCRSRRPE--PVQTLDEARDGISSVKVSD-----HEVLSGS 170
Query: 350 DDGTCRIWDARYSQ-FSPRIYIP 371
DG R +D R Q FS + P
Sbjct: 171 VDGRVRRYDLRMGQLFSDYVGSP 193
Score = 76 (31.8 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLD--VHPFNPRIAMSAGYDG 605
+S D + L + +D + + + G L+ TGH Y LD + + + +S DG
Sbjct: 199 FSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNQEYKLDCCLSERDTHV-VSCSEDG 257
Query: 606 KTIVWDIWEG 615
K WD+ EG
Sbjct: 258 KVYFWDLVEG 267
Score = 45 (20.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 13/56 (23%), Positives = 23/56 (41%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVW 610
V++ D ++ W+ +G+L +L L HP P + + G G W
Sbjct: 250 VVSCSEDGKVYFWDLVEGALALALPVGPGVVQSLAYHPTEPCLLTAMG--GSVHCW 303
Score = 44 (20.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 483 NIVTCSRDGSAIIW 496
++V+CS DG W
Sbjct: 249 HVVSCSEDGKVYFW 262
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 133 (51.9 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 36/126 (28%), Positives = 53/126 (42%)
Query: 236 IKRVRGHRNAVYCAIFDRS-GRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
++ + H + V + +S GR + TG DD V +WS+ C+ S GH I
Sbjct: 13 LQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQIS 72
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
IRVW L + L GH A + ++ F P GS + S S D
Sbjct: 73 AKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPY-GSF--VASGSLDTDI 129
Query: 355 RIWDAR 360
++WD R
Sbjct: 130 KLWDVR 135
Score = 83 (34.3 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 18/73 (24%), Positives = 38/73 (52%)
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
+ V + +S D +++ +A D + +W+ G ++ TGH+ V++ HP ++
Sbjct: 148 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHP--SEYLLA 205
Query: 601 AGYDGKTI-VWDI 612
+G +TI WD+
Sbjct: 206 SGSSDRTIRFWDL 218
Score = 47 (21.6 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 24/99 (24%), Positives = 42/99 (42%)
Query: 391 QSHQ--IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNY 448
+SH + C F+ +G + + D ++W+ + + E +GH VN
Sbjct: 144 KSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLT------AGKVMFEF---TGHSGPVNV 194
Query: 449 VQFSGCAVASRFSLADSSKEDSTPKFKNSWFCHDNIVTC 487
V+F S + LA S D T +F + H +V+C
Sbjct: 195 VEFH----PSEYLLASGSS-DRTIRFWDLEKFH--VVSC 226
>UNIPROTKB|C9JLV4 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
InterPro:IPR011047 SUPFAM:SSF50998 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 EMBL:AC011248
HOGENOM:HOG000290173 HGNC:HGNC:576 EMBL:AC013283 IPI:IPI00953387
SMR:C9JLV4 STRING:C9JLV4 Ensembl:ENST00000339433
Ensembl:ENST00000549007 Uniprot:C9JLV4
Length = 1163
Score = 141 (54.7 bits), Expect = 7.7e-08, Sum P(3) = 7.7e-08
Identities = 35/129 (27%), Positives = 57/129 (44%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT--DX 291
+ + ++ H + V C F R++ T S D+ VKIW+ T + + H +
Sbjct: 648 EKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHF 707
Query: 292 XXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSS-SD 350
DC +++W L + + GHT +V FSP +LL+S S
Sbjct: 708 TNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDD----KLLASCSA 763
Query: 351 DGTCRIWDA 359
DGT ++WDA
Sbjct: 764 DGTLKLWDA 772
Score = 107 (42.7 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 29/132 (21%), Positives = 55/132 (41%)
Query: 231 QKMQNIKR--VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDI 288
+ + N+ R VR H +AVY A F G+ + + D+ ++++ ET L + HE ++
Sbjct: 601 KNITNLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEV 660
Query: 289 TDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSS 348
D +++W G + H+ V F+ S + LL +
Sbjct: 661 LCCAFSTDDRFIATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFT---NSSHHLLLA 717
Query: 349 SDDGTC--RIWD 358
+ C ++WD
Sbjct: 718 TGSSDCFLKLWD 729
Score = 65 (27.9 bits), Expect = 7.7e-08, Sum P(3) = 7.7e-08
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDV 446
F+ +G+ F+T S D R+W K + + E+DV+ EN+V
Sbjct: 847 FSPDGSSFLTSSDDQTIRLWETKKVCKNSAVMLKQEVDVVF-QENEV 892
Score = 65 (27.9 bits), Expect = 7.7e-08, Sum P(3) = 7.7e-08
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 546 IVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPF-NPRIAMSAGYD 604
I ++ D + ++++ D I VWN + L GH E+ V D N R+ +S +D
Sbjct: 966 IQFTADEKTLISSSDDAEIQVWNWQLDKCIF-LRGHQET--VKDFRLLKNSRL-LSWSFD 1021
Query: 605 GKTIVWDIWEG 615
G VW+I G
Sbjct: 1022 GTVKVWNIITG 1032
Score = 61 (26.5 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 26/110 (23%), Positives = 51/110 (46%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKT 607
WS D ++ A + +I +WN S V GH + + P S+ D +T
Sbjct: 806 WSADGARIMVAAKN-KIFLWNTDSRSKVADCRGHLSWVHGVMFSPDGSSFLTSS--DDQT 862
Query: 608 I-VWD---IWEGIPIRI-YEISR-FRDGASIILS-DDVGQLYILN--TGQ 648
I +W+ + + + + E+ F++ ++L+ D + +L ++N TGQ
Sbjct: 863 IRLWETKKVCKNSAVMLKQEVDVVFQENEVMVLAVDHIRRLQLINGRTGQ 912
Score = 53 (23.7 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 26/97 (26%), Positives = 46/97 (47%)
Query: 566 VWNAADGSLVH-----SLTGH-TESTYVLDVHPFNP--RIAMSAGYDGKTIVWDIWEGIP 617
+WN ++G L+H S G T +V D+ F+P ++ +SAG G W++ G
Sbjct: 1068 IWNVSNGELLHLCAPLSEEGAATHGGWVTDLC-FSPDGKMLISAG--GYIKWWNVVTGES 1124
Query: 618 IRIY-----EISRFR---DGASIILSDDVGQLYILNT 646
+ + + + D + + D++G LYIL T
Sbjct: 1125 SQTFYTNGTNLKKIHVSPDFKTYVTVDNLGILYILQT 1161
Score = 52 (23.4 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 393 HQ--IFCCAFNANGTVFVTGSSDTLARVWN 420
HQ + C + + T F + S+D A++WN
Sbjct: 1041 HQGTVLSCDISHDATKFSSTSADKTAKIWN 1070
Score = 45 (20.9 bits), Expect = 7.6e-06, Sum P(3) = 7.6e-06
Identities = 16/67 (23%), Positives = 26/67 (38%)
Query: 550 LDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDV-HPFNPRIAMSAGYDGKTI 608
L N +L+ D + VWN G+ H + D+ H + SA K
Sbjct: 1010 LKNSRLLSWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFSSTSADKTAK-- 1067
Query: 609 VWDIWEG 615
+W++ G
Sbjct: 1068 IWNVSNG 1074
Score = 40 (19.1 bits), Expect = 0.00036, Sum P(3) = 0.00036
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 400 FNANGTVFVTGSSDTLARVWN 420
F A+ ++ S D +VWN
Sbjct: 968 FTADEKTLISSSDDAEIQVWN 988
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 145 (56.1 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 43/197 (21%), Positives = 85/197 (43%)
Query: 227 STMVQKMQNIKRVRGHRNAVYCAIFDRSGRY--VITGSDDRLVKIWSMETAYCLASCRGH 284
+T+ + I GH+ V C F + +++ S D+ VK+W+++ + GH
Sbjct: 133 NTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGH 192
Query: 285 EGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQ 344
G + D +I +W L +G + L + + ++ FSP Y
Sbjct: 193 SGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSI-IHSLCFSPNR---YW 248
Query: 345 LLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFN--A 402
L +++++ + RIWD + + ++A S+ G ++ I+C + N A
Sbjct: 249 LCAATEN-SIRIWDLESKSVVEDLKVDLKAEA---EKTDGSTGIGNKTKVIYCTSLNWSA 304
Query: 403 NGTVFVTGSSDTLARVW 419
+G +G +D + RVW
Sbjct: 305 DGNTLFSGYTDGVIRVW 321
Score = 121 (47.7 bits), Expect = 8.0e-08, Sum P(3) = 8.0e-08
Identities = 31/124 (25%), Positives = 55/124 (44%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+R+ GH + V + G++ ++GS D +++W + T GH D+
Sbjct: 57 RRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTD 116
Query: 297 XXXXXXXXXDCIIRVWR-LPD-GLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D I++W L + IS GH V+ + FSP V ++S+S D T
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNT-LVPTIVSASWDKTV 175
Query: 355 RIWD 358
++W+
Sbjct: 176 KVWN 179
Score = 100 (40.3 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 43/175 (24%), Positives = 67/175 (38%)
Query: 258 VITGSDDRLVKIWSM---ETAYCLASCR--GHEGDITDXXXXXXXXXXXXXXXDCIIRVW 312
++T S D+ + +W + + +Y +A R GH + D D +R+W
Sbjct: 31 IVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLW 90
Query: 313 RLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPR 372
L G GHT V ++AFS Q++S+S D T ++W+
Sbjct: 91 DLATGESTRRFVGHTKDVLSVAFST---DNRQIVSASRDRTIKLWNT------------- 134
Query: 373 PSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTV--FVTGSSDTLARVWNA--CK 423
G S A + C F+ N V V+ S D +VWN CK
Sbjct: 135 -----LGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCK 184
Score = 86 (35.3 bits), Expect = 8.0e-08, Sum P(3) = 8.0e-08
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWE 614
+++A D + VWN + L ++L GH+ + V P + + S G DG ++WD+ E
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSP-DGSLCASGGKDGVILLWDLAE 224
Query: 615 G 615
G
Sbjct: 225 G 225
Score = 54 (24.1 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 17/71 (23%), Positives = 33/71 (46%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNP-RIAMSA 601
+N + S D + D I +W+ A+G ++SL E+ ++ F+P R + A
Sbjct: 196 LNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSL----EAGSIIHSLCFSPNRYWLCA 251
Query: 602 GYDGKTIVWDI 612
+ +WD+
Sbjct: 252 ATENSIRIWDL 262
Score = 42 (19.8 bits), Expect = 8.0e-08, Sum P(3) = 8.0e-08
Identities = 9/14 (64%), Positives = 10/14 (71%)
Query: 1054 LSNGYKDGKIR-WG 1066
L +GY DG IR WG
Sbjct: 309 LFSGYTDGVIRVWG 322
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 160 (61.4 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 42/183 (22%), Positives = 84/183 (45%)
Query: 241 GHRNAVYCAIFDRSGRY--VITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
GHR+ V C F + +++ S D+ VK+W++ ++ GH G ++
Sbjct: 148 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGS 207
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D ++ +W L +G + L ++ + A+ FSP Y L ++++ G +IWD
Sbjct: 208 LCASGGKDGVVLLWDLAEGKKLYSLEANSV-IHALCFSPNR---YWLCAATEHGI-KIWD 262
Query: 359 ARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFN--ANGTVFVTGSSDTLA 416
+ + ++A N P+++ + I+C + N A+G+ +G +D +
Sbjct: 263 LESKSIVEDLKVDLKAEAEKADNSGPAAT---KRKVIYCTSLNWSADGSTLFSGYTDGVI 319
Query: 417 RVW 419
RVW
Sbjct: 320 RVW 322
Score = 103 (41.3 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 26/125 (20%), Positives = 51/125 (40%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+R+ GH + V + G++ ++GS D +++W + GH D+
Sbjct: 57 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLD 116
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRG---HTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D I++W ++ G H V+ + FSP ++S+S D T
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQP-TIVSASWDKT 175
Query: 354 CRIWD 358
++W+
Sbjct: 176 VKVWN 180
Score = 92 (37.4 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWE 614
+++A D + VWN ++ L +L GHT + V P + + S G DG ++WD+ E
Sbjct: 167 IVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSP-DGSLCASGGKDGVVLLWDLAE 225
Query: 615 G 615
G
Sbjct: 226 G 226
Score = 43 (20.2 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 1050 DYLNLSNGYKDGKIR-WG 1066
D L +GY DG IR WG
Sbjct: 306 DGSTLFSGYTDGVIRVWG 323
>UNIPROTKB|Q6PNB6 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9986 "Oryctolagus cuniculus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:10681
OrthoDB:EOG4XWFXZ EMBL:AY591252 RefSeq:NP_001075639.1
UniGene:Ocu.3141 ProteinModelPortal:Q6PNB6 SMR:Q6PNB6
GeneID:100008941 Uniprot:Q6PNB6
Length = 353
Score = 131 (51.2 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 33/126 (26%), Positives = 50/126 (39%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT--DXXXX 294
K V H N + F S ++T S D +W +E+ L S GH D+ D
Sbjct: 147 KSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPS 206
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D VW + G + H + + ++ + P G + S SDD TC
Sbjct: 207 ETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPS-GDAFA--SGSDDATC 263
Query: 355 RIWDAR 360
R++D R
Sbjct: 264 RLYDLR 269
Score = 76 (31.8 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 21/69 (30%), Positives = 28/69 (40%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G + + +SL R + A D I VW+ G+ V L GH L V P S
Sbjct: 285 GASSVDFSLSGRLLFAGYNDYTINVWDVLKGARVSILFGHENRVSTLRVSPDGTAFC-SG 343
Query: 602 GYDGKTIVW 610
+D VW
Sbjct: 344 SWDHTLRVW 352
Score = 73 (30.8 bits), Expect = 3.6e-05, Sum P(4) = 3.6e-05
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 326 HTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPS 385
HT ++A +F+ S Q+L++S DGTC +WD Q + +D + ++APS
Sbjct: 152 HTNYLSACSFT---NSDMQILTASGDGTCALWDVESGQLLQSFH-GHGADVLC-LDLAPS 206
Query: 386 SS 387
+
Sbjct: 207 ET 208
Score = 62 (26.9 bits), Expect = 3.6e-05, Sum P(4) = 3.6e-05
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 233 MQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMET 274
M+ + ++GH N V C + + R +++ S D V +W T
Sbjct: 53 MKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFT 94
Score = 57 (25.1 bits), Expect = 3.6e-05, Sum P(4) = 3.6e-05
Identities = 18/57 (31%), Positives = 26/57 (45%)
Query: 404 GTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQF--SGCAVAS 458
G FV+G D A VW+ + + HE+D+N V++ SG A AS
Sbjct: 209 GNTFVSGGCDKKAMVWDM---------RSGQCVQAFETHESDINSVRYYPSGDAFAS 256
Score = 52 (23.4 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 17/61 (27%), Positives = 27/61 (44%)
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS--GCAVA 457
F+ +G + G +D VW+ K + +L GHEN V+ ++ S G A
Sbjct: 291 FSLSGRLLFAGYNDYTINVWDVLK---------GARVSILFGHENRVSTLRVSPDGTAFC 341
Query: 458 S 458
S
Sbjct: 342 S 342
Score = 47 (21.6 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 403 NGTVFVTGSSDTLARVW 419
+GT F +GS D RVW
Sbjct: 336 DGTAFCSGSWDHTLRVW 352
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 133 (51.9 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 37/154 (24%), Positives = 63/154 (40%)
Query: 225 KPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGH 284
+P + QK +K + + AV F+ G Y +T D+ +K+W+ L + GH
Sbjct: 9 RPPELPQK--RLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGH 66
Query: 285 EGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQ 344
++ D D + +W + G + RGH V + F+ +V
Sbjct: 67 GYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEE-ATV-- 123
Query: 345 LLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVA 378
+LS S D + R WD R + P + D V+
Sbjct: 124 ILSGSIDSSIRCWDCRSRRPEPVQTLDEARDGVS 157
Score = 71 (30.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 19/70 (27%), Positives = 32/70 (45%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLD--VHPFNPRIAMSAGYDG 605
+S D + L + +D + + + G L+ GH Y LD + + + +S DG
Sbjct: 199 FSRDGQCTLVSSLDSTLRLLDKDTGELLGEYKGHKNQEYKLDCCLSERDTHV-VSCSEDG 257
Query: 606 KTIVWDIWEG 615
K WD+ EG
Sbjct: 258 KVFFWDLVEG 267
Score = 47 (21.6 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVW 610
V++ D ++ W+ +G+L +L + L HP P + + G G W
Sbjct: 250 VVSCSEDGKVFFWDLVEGALALALPVGSGVVQSLAYHPTEPCLLTAMG--GSVQCW 303
Score = 45 (20.9 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 483 NIVTCSRDGSAIIW 496
++V+CS DG W
Sbjct: 249 HVVSCSEDGKVFFW 262
>UNIPROTKB|E1BVN4 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 EMBL:AADN02045388
EMBL:AADN02045389 IPI:IPI00572484 RefSeq:XP_413801.2
ProteinModelPortal:E1BVN4 Ensembl:ENSGALT00000007455 GeneID:415417
KEGG:gga:415417 NextBio:20819029 Uniprot:E1BVN4
Length = 395
Score = 130 (50.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 34/126 (26%), Positives = 50/126 (39%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT--DXXXX 294
K V H N + F S ++T S D +W +E+ L S GH D+ D
Sbjct: 189 KSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPS 248
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D VW + G I H + + ++ + P G + S SDD TC
Sbjct: 249 ETGNTFVSGGCDKKAMVWDMRSGQCIQSFETHDSDINSVRYYPS-GDAFA--SGSDDATC 305
Query: 355 RIWDAR 360
R++D R
Sbjct: 306 RLYDLR 311
Score = 78 (32.5 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 21/69 (30%), Positives = 28/69 (40%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G + + +SL R + A D I VW+ GS V L GH L V P S
Sbjct: 327 GASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFC-SG 385
Query: 602 GYDGKTIVW 610
+D +W
Sbjct: 386 SWDHTLRIW 394
Score = 73 (30.8 bits), Expect = 9.6e-05, Sum P(4) = 9.6e-05
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 326 HTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPS 385
HT ++A +F+ S Q+L++S DGTC +WD Q + +D + ++APS
Sbjct: 194 HTNYLSACSFT---NSDMQILTASGDGTCALWDVESGQLLQSFH-GHGADVLC-LDLAPS 248
Query: 386 SS 387
+
Sbjct: 249 ET 250
Score = 62 (26.9 bits), Expect = 9.6e-05, Sum P(4) = 9.6e-05
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 233 MQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMET 274
M+ + ++GH N V C + + R +++ S D V +W T
Sbjct: 95 MKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFT 136
Score = 53 (23.7 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS--GCAVA 457
F+ +G + G +D VW+ K + + +L GHEN V+ ++ S G A
Sbjct: 333 FSLSGRLLFAGYNDYTINVWDVLKGS---------RVSILFGHENRVSTLRVSPDGTAFC 383
Query: 458 S 458
S
Sbjct: 384 S 384
Score = 53 (23.7 bits), Expect = 9.6e-05, Sum P(4) = 9.6e-05
Identities = 18/57 (31%), Positives = 26/57 (45%)
Query: 404 GTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQF--SGCAVAS 458
G FV+G D A VW+ + I H++D+N V++ SG A AS
Sbjct: 251 GNTFVSGGCDKKAMVWDM---------RSGQCIQSFETHDSDINSVRYYPSGDAFAS 298
Score = 46 (21.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 403 NGTVFVTGSSDTLARVW 419
+GT F +GS D R+W
Sbjct: 378 DGTAFCSGSWDHTLRIW 394
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 147 (56.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 45/197 (22%), Positives = 83/197 (42%)
Query: 227 STMVQKMQNIKRVRGHRNAVYCAIFDRSGRY--VITGSDDRLVKIWSMETAYCLASCRGH 284
+T+ + I GH+ V C F + +++ S D+ VK+W+++ S GH
Sbjct: 133 NTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGH 192
Query: 285 EGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQ 344
G + D +I +W L +G + L + + ++ FSP Y
Sbjct: 193 SGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSI-IHSLCFSPNR---YW 248
Query: 345 LLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFN--A 402
L +++++ + RIWD + + S+A G Q I+C + N A
Sbjct: 249 LCAATEN-SIRIWDLESKSVVEDLKVDLKSEAEKNEG---GVGTGNQKKVIYCTSLNWSA 304
Query: 403 NGTVFVTGSSDTLARVW 419
+G+ +G +D + RVW
Sbjct: 305 DGSTLFSGYTDGVVRVW 321
Score = 117 (46.2 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 31/124 (25%), Positives = 55/124 (44%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+R+ GH + V + G++ ++GS D +++W + T GH D+
Sbjct: 57 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTD 116
Query: 297 XXXXXXXXXDCIIRVWR-LPD-GLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D I++W L + IS GH V+ + FSP V ++S+S D T
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNT-LVPTIVSASWDKTV 175
Query: 355 RIWD 358
++W+
Sbjct: 176 KVWN 179
Score = 100 (40.3 bits), Expect = 8.3e-06, Sum P(3) = 8.3e-06
Identities = 33/127 (25%), Positives = 55/127 (43%)
Query: 239 VRGHRNAVYCAI--FDRSGRYVITGSDDRLVKIWSM---ETAYCLASCR--GHEGDITDX 291
+R H + V D S ++T S D+ + +W + + +Y +A R GH + D
Sbjct: 11 MRAHTDIVTAIATPIDNSD-IIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDV 69
Query: 292 XXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDD 351
D +R+W L G GHT V ++AFS Q++S+S D
Sbjct: 70 VLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFST---DNRQIVSASRD 126
Query: 352 GTCRIWD 358
T ++W+
Sbjct: 127 RTIKLWN 133
Score = 89 (36.4 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWE 614
+++A D + VWN + L +SL GH+ + V P + + S G DG ++WD+ E
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSP-DGSLCASGGKDGVILLWDLAE 224
Query: 615 G 615
G
Sbjct: 225 G 225
Score = 54 (24.1 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 17/71 (23%), Positives = 33/71 (46%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNP-RIAMSA 601
+N + S D + D I +W+ A+G ++SL E+ ++ F+P R + A
Sbjct: 196 LNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSL----EAGSIIHSLCFSPNRYWLCA 251
Query: 602 GYDGKTIVWDI 612
+ +WD+
Sbjct: 252 ATENSIRIWDL 262
Score = 42 (19.8 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 1050 DYLNLSNGYKDGKIR-WG 1066
D L +GY DG +R WG
Sbjct: 305 DGSTLFSGYTDGVVRVWG 322
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 160 (61.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 43/147 (29%), Positives = 62/147 (42%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+ GH V ++ SGR++ T DR ++W +E + GH + D
Sbjct: 318 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS 377
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D RVW L G I L GH + I+FSP G Y + + S D TC++WD
Sbjct: 378 LAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISFSPN-G--YHIATGSGDNTCKVWD 434
Query: 359 ARYSQFSPRIY-IPRPSDAVAGRNMAP 384
R + +Y IP + V G P
Sbjct: 435 LRQRRC---VYTIPAHQNLVTGVKFEP 458
Score = 130 (50.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 35/148 (23%), Positives = 53/148 (35%)
Query: 210 HHRAPSIRAACYAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKI 269
H + CY + ++ + I GH VY F + G TG D ++
Sbjct: 331 HPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRV 390
Query: 270 WSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAA 329
W + T C+ GH +I D +VW L + + H
Sbjct: 391 WDLRTGRCIMFLEGHLKEIYGISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNL 450
Query: 330 VTAIAFSPRPGSVYQLLSSSDDGTCRIW 357
VT + F P G LL+ + D T +IW
Sbjct: 451 VTGVKFEPIHGDF--LLTGAYDNTAKIW 476
Score = 50 (22.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 15/57 (26%), Positives = 22/57 (38%)
Query: 554 FVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVW 610
F+L D +W S + +L GH LD+ IA + YD +W
Sbjct: 463 FLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIA-TCSYDRTFKLW 518
Score = 48 (22.0 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 578 LTGHTESTYVLDVHP-FNPRIAMSAGYDGKTIVWDI 612
LTG ++T + HP ++P + AG++GK + DI
Sbjct: 465 LTGAYDNTAKIWTHPGWSP-LKTLAGHEGKVMGLDI 499
Score = 43 (20.2 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 403 NGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDV 446
+G +TG+ D A++W T P + L+GHE V
Sbjct: 460 HGDFLLTGAYDNTAKIW------THPGWSP---LKTLAGHEGKV 494
>FB|FBgn0011569 [details] [associations]
symbol:can "cannonball" species:7227 "Drosophila
melanogaster" [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0007141 "male meiosis I" evidence=IMP] [GO:0048515 "spermatid
differentiation" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0005669 "transcription factor TFIID
complex" evidence=ISS] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=ISS]
[GO:0007126 "meiosis" evidence=TAS] [GO:0007286 "spermatid
development" evidence=IMP;TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0001673
"male germ cell nucleus" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0005730 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007286 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001673 GO:GO:0006367 GO:GO:0010468
GO:GO:0007141 HSSP:P16649 GO:GO:0005669
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:AF346730
RefSeq:NP_524827.1 UniGene:Dm.1796 SMR:Q9VT91 IntAct:Q9VT91
MINT:MINT-834439 STRING:Q9VT91 EnsemblMetazoa:FBtr0076299
GeneID:45432 KEGG:dme:Dmel_CG6577 UCSC:CG6577-RA CTD:12329
FlyBase:FBgn0011569 InParanoid:Q9VT91 OMA:RIWDIVK OrthoDB:EOG4F4QS8
GenomeRNAi:45432 NextBio:838153 Uniprot:Q9VT91
Length = 942
Score = 150 (57.9 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 36/132 (27%), Positives = 58/132 (43%)
Query: 229 MVQKMQNIKR--VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEG 286
M+ ++ R + GH+ VY F+ R++IT S+D V++W + + C+ GH
Sbjct: 610 MIDPIKKFTRRTLYGHQGPVYGCSFNPEDRFLITCSEDFSVRLWCLLSWSCVVIFSGHLA 669
Query: 287 DITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLL 346
+ DC RVW + P +L+GH A + F P + +
Sbjct: 670 PVCFVVFAPRGYYFATASDDCTARVWMQDNTKPARILQGHLAELGVCLFHPNR---HYMA 726
Query: 347 SSSDDGTCRIWD 358
+ S D T RIWD
Sbjct: 727 TGSADCTVRIWD 738
Score = 138 (53.6 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 32/118 (27%), Positives = 50/118 (42%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH V +F G Y T SDD ++W + +GH ++
Sbjct: 666 GHLAPVCFVVFAPRGYYFATASDDCTARVWMQDNTKPARILQGHLAELGVCLFHPNRHYM 725
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
DC +R+W + + + + RGH + +TA+ +S G Y L+S DD IWD
Sbjct: 726 ATGSADCTVRIWDIVKAVQVRIFRGHKSRITALIYSIC-GR-Y-LVSGGDDNLIMIWD 780
Score = 67 (28.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 15/69 (21%), Positives = 34/69 (49%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
+ +++S+ R++++ D I +W+ A+ L+ H S +++ N I + G
Sbjct: 755 ITALIYSICGRYLVSGGDDNLIMIWDTANEILMQFFDHHKASINTMEISLDN-NILVVGG 813
Query: 603 YDGKTIVWD 611
D + +WD
Sbjct: 814 QDCQLTLWD 822
Score = 67 (28.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 17/72 (23%), Positives = 30/72 (41%)
Query: 552 NRFVLAA-IMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVW 610
NR +A DC + +W+ V GH L ++ R +S G D ++W
Sbjct: 721 NRHYMATGSADCTVRIWDIVKAVQVRIFRGHKSRITAL-IYSICGRYLVSGGDDNLIMIW 779
Query: 611 DIWEGIPIRIYE 622
D I ++ ++
Sbjct: 780 DTANEILMQFFD 791
Score = 39 (18.8 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 394 QIFCCAFNANGTVFVTGSSDTLARVWN 420
+I ++ G V+G D L +W+
Sbjct: 754 RITALIYSICGRYLVSGGDDNLIMIWD 780
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 152 (58.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 35/127 (27%), Positives = 52/127 (40%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
+N + ++GH V FD S + TGS DR +KIW + T + GH +
Sbjct: 167 KNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAV 226
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D ++ W L I GH + V +A P ++ LL+ D
Sbjct: 227 SNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHP---TLDVLLTGGRDSV 283
Query: 354 CRIWDAR 360
CR+WD R
Sbjct: 284 CRVWDIR 290
Score = 125 (49.1 bits), Expect = 0.00059, P = 0.00059
Identities = 33/123 (26%), Positives = 50/123 (40%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH V Y+ + DD+ VK W +E + S GH +
Sbjct: 216 GHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVL 275
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
D + RVW + + I L GH V ++ F+ RP Q+++ S D T + WD R
Sbjct: 276 LTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSV-FT-RPTDP-QVVTGSHDTTIKFWDLR 332
Query: 361 YSQ 363
Y +
Sbjct: 333 YGK 335
Score = 57 (25.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 12/53 (22%), Positives = 26/53 (49%)
Query: 564 IC-VWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWEG 615
+C VW+ + +L+GH + + P +P++ ++ +D WD+ G
Sbjct: 283 VCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQV-VTGSHDTTIKFWDLRYG 334
Score = 53 (23.7 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYD 604
V+ D I W+ G + +LT H +S + +HP A SA D
Sbjct: 317 VVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFA-SASAD 365
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 138 (53.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 30/122 (24%), Positives = 56/122 (45%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ ++GH ++V FD +G+ + + S D +K+W + C+ + GH+ +++
Sbjct: 144 RTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLL-SSSDDGTCR 355
D I++W + G + GH V + RP L+ SSS+D T R
Sbjct: 204 GDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV----RPNQDGTLIASSSNDQTVR 259
Query: 356 IW 357
+W
Sbjct: 260 VW 261
Score = 130 (50.8 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 30/118 (25%), Positives = 52/118 (44%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GHR+ V IF +++ S+D +K+W ET + +GH + D
Sbjct: 106 GHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLL 165
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D I++W I + GH V+++A P G ++S+S D T ++W+
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN-GD--HIVSASRDKTIKMWE 220
Score = 110 (43.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 25/107 (23%), Positives = 47/107 (43%)
Query: 231 QKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
Q + I+ + GH + V +G ++++ S D+ +K+W + T YC+ + GH +
Sbjct: 180 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRM 239
Query: 291 XXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSP 337
D +RVW + + LR H V I+++P
Sbjct: 240 VRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Score = 69 (29.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 554 FVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI-VWD 611
F+L+ D I +W+ + G + +L GH + VHP I A D KT+ +WD
Sbjct: 310 FLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCA--DDKTLRIWD 366
Score = 63 (27.2 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI-VW 610
+++A D I +W A G V + TGH E +V V P +++ + +T+ VW
Sbjct: 207 IVSASRDKTIKMWEVATGYCVKTFTGHRE--WVRMVRPNQDGTLIASSSNDQTVRVW 261
Score = 51 (23.0 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 401 NANGTVFVTGSSDTLARVWN-ACKPNTDDSDQPNHEIDVLS 440
N +GT+ + S+D RVW A K + + H ++ +S
Sbjct: 243 NQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Score = 51 (23.0 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 11/59 (18%), Positives = 26/59 (44%)
Query: 553 RFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWD 611
+++++ D + +W+ + +L+ H LD H P + ++ D VW+
Sbjct: 351 KYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYV-VTGSVDQTVKVWE 408
Score = 48 (22.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 380 RNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACK 423
+N + + H + F+ VTGS D +VW C+
Sbjct: 368 KNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE-CR 410
Score = 37 (18.1 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 484 IVTCSRDGSAIIWIPRSRR 502
IV+C+ D + IW +++R
Sbjct: 353 IVSCADDKTLRIWDYKNKR 371
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 155 (59.6 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 46/180 (25%), Positives = 75/180 (41%)
Query: 242 HRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXX 301
H++ V C F + +++GS D VKIW +++ C + H G +
Sbjct: 155 HQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCA 214
Query: 302 XXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARY 361
D +W L G P+ L + A+AFSP Y L +++DD IWD
Sbjct: 215 SGGKDTFACLWELSSGKPLYKLEARNT-INALAFSPNK---YWLSAATDDKII-IWDLLT 269
Query: 362 SQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNA 421
Q I +P + S P++ A++A+G+V G +D L RV+ +
Sbjct: 270 KQVLAEI-VPEVKEQAFDSKKKKESK--PKAPACLSLAWSADGSVLYAGYNDGLIRVYKS 326
Score = 115 (45.5 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 29/127 (22%), Positives = 52/127 (40%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ ++GH + V + G++ ++GS D +++W + +GH D+
Sbjct: 64 RSLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSD 123
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRG---HTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D I+VW + L G H V+ I FSP ++ +S S D
Sbjct: 124 NRQIISGSRDATIKVWNTLGECKFT-LEGPEAHQDWVSCIRFSPNTPTI---VSGSWDNK 179
Query: 354 CRIWDAR 360
+IWD +
Sbjct: 180 VKIWDIK 186
Score = 112 (44.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 30/125 (24%), Positives = 53/125 (42%)
Query: 241 GHRNAVYC-AIFDRSGRYVITGSDDRLVKIWSMETAYCLA------SCRGHEGDITDXXX 293
GH V A+ + +I+ S D+ V +W + + S +GH + D
Sbjct: 19 GHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVI 78
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D +R+W + G+ + +GHT V ++AFS Q++S S D T
Sbjct: 79 SHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFS---SDNRQIISGSRDAT 135
Query: 354 CRIWD 358
++W+
Sbjct: 136 IKVWN 140
Score = 74 (31.1 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNP-RIAMSA 601
VN + S D + D C+W + G ++ L E+ ++ F+P + +SA
Sbjct: 201 VNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKL----EARNTINALAFSPNKYWLSA 256
Query: 602 GYDGKTIVWDI 612
D K I+WD+
Sbjct: 257 ATDDKIIIWDL 267
Score = 73 (30.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 17/76 (22%), Positives = 36/76 (47%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V+ I +S + +++ D ++ +W+ H+LT HT + + P + + S G
Sbjct: 159 VSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISP-DGSLCASGG 217
Query: 603 YDGKTIVWDIWEGIPI 618
D +W++ G P+
Sbjct: 218 KDTFACLWELSSGKPL 233
>TAIR|locus:2089303 [details] [associations]
symbol:AT3G16650 "AT3G16650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB022217 GO:GO:0080008 HOGENOM:HOG000207595
ProtClustDB:CLSN2685622 EMBL:X82826 EMBL:AY054181 EMBL:BT020378
IPI:IPI00521576 RefSeq:NP_566557.1 UniGene:At.104
ProteinModelPortal:Q39190 SMR:Q39190 IntAct:Q39190 STRING:Q39190
EnsemblPlants:AT3G16650.1 GeneID:820917 KEGG:ath:AT3G16650
GeneFarm:2851 TAIR:At3g16650 InParanoid:Q39190 OMA:HKKTVRA
PhylomeDB:Q39190 Genevestigator:Q39190 GermOnline:AT3G16650
Uniprot:Q39190
Length = 479
Score = 158 (60.7 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 45/163 (27%), Positives = 66/163 (40%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
+N + ++GH V FD S + TGS DR +KIW + T + GH G +
Sbjct: 161 KNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAV 220
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D ++ W L I GH V +A P ++ +L+ D
Sbjct: 221 SNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHP---TLDVVLTGGRDSV 277
Query: 354 CRIWDARYSQFSPRIYI-PRPSD--AVAGRNMAPSSSAGPQSH 393
CR+WD R +I++ P SD +V R P G SH
Sbjct: 278 CRVWDIRTKM---QIFVLPHDSDVFSVLARPTDPQVITG--SH 315
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 159 (61.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 51/201 (25%), Positives = 87/201 (43%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH +Y F + G+ +++GS DR V +W +E +G +T
Sbjct: 386 GHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHTDDG-VTTVMFSPDGQFI 444
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
D +IR+W G + L GH +V ++AFSP G Y L+S S D T ++W+ +
Sbjct: 445 AAGSLDKVIRIWT-SSGTLVEQLHGHEESVYSVAFSP-DGK-Y-LVSGSLDNTIKLWELQ 500
Query: 361 -YSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVW 419
S +P +Y G + + G + I + +G ++GS D + W
Sbjct: 501 CVSNVAPSMY------KEGG--ICKQTFTGHKDF-ILSVTVSPDGKWIISGSKDRTIQFW 551
Query: 420 NACKPNTDDSDQPNHEIDVLS 440
+ P++ + Q H V+S
Sbjct: 552 SPDSPHSQLTLQ-GHNNSVIS 571
Score = 109 (43.4 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 25/77 (32%), Positives = 42/77 (54%)
Query: 536 ILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNP 595
IL T GV +++S D +F+ A +D I +W ++ G+LV L GH ES Y + P +
Sbjct: 425 ILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSS-GTLVEQLHGHEESVYSVAFSP-DG 482
Query: 596 RIAMSAGYDGKTIVWDI 612
+ +S D +W++
Sbjct: 483 KYLVSGSLDNTIKLWEL 499
Score = 83 (34.3 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 31/140 (22%), Positives = 57/140 (40%)
Query: 225 KPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGH 284
+P VQ + ++ H + + F G+++ TG + R ++++ET + +
Sbjct: 285 EPPISVQLLHTLE----HTSVICYVRFSADGKFLATGCN-RAAMVFNVETGKLITLLQEE 339
Query: 285 ----EGD--ITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPR 338
EGD + D IR+W + +L GH + ++ FS +
Sbjct: 340 SSKREGDLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFS-K 398
Query: 339 PGSVYQLLSSSDDGTCRIWD 358
G L+S S D T +WD
Sbjct: 399 DGKT--LVSGSGDRTVCLWD 416
Score = 38 (18.4 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 1465 GHQEYINYSGSREVGPWITVKGNIRAVEFCKVES 1498
GH+++I G WI R ++F +S
Sbjct: 522 GHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDS 555
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 142 (55.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 44/157 (28%), Positives = 69/157 (43%)
Query: 225 KPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGH 284
KP ++ + + + +RGH V F + +G D VK+W+ T + + GH
Sbjct: 160 KPESVNYRQKFL--LRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGH 217
Query: 285 EGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGL--PISVLRGHTAAVTAIAFSPRPGSV 342
I+ D IR+W + G P + GH V AIAFSP+ G++
Sbjct: 218 LAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFI-GHHNYVYAIAFSPK-GNM 275
Query: 343 YQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAG 379
L+S S D +WD R ++ + P SD V+G
Sbjct: 276 --LVSGSYDEAVFLWDVRSARVMKSL--PAHSDPVSG 308
Score = 125 (49.1 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 32/119 (26%), Positives = 50/119 (42%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH N VY F G +++GS D V +W + +A + S H ++
Sbjct: 259 GHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLI 318
Query: 301 XXXXXDCIIRVWRLPDGLPISVL-RGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D ++R+W G + L V+++ FSP G Y L + DD R+WD
Sbjct: 319 ASCATDGLVRIWDTSTGQCLRTLVHEDNPPVSSVKFSPN-GK-YVLAWTLDD-CVRLWD 374
Score = 67 (28.6 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 28/118 (23%), Positives = 54/118 (45%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLD----VH----PFN 594
V+ + +S + ++VLA +D + +W+ +G + + GH+ Y L V+ P
Sbjct: 349 VSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGR 408
Query: 595 -P--RIAMSAGYDGKTIVWDIWEGIPIRIYEISRFRDGASIILSDDVGQLYILNTGQG 649
P A+S DG + WD+ + ++ + DG ++L D +TG+G
Sbjct: 409 TPGYAFAVSGSEDGAILCWDV---VTKKVLQRIEAHDG--VVLGVDT-----CSTGEG 456
Score = 65 (27.9 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 19/83 (22%), Positives = 40/83 (48%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNP--RIAM 599
G++ +VW D + + D + +W+ + G + +L H ++ V V F+P + +
Sbjct: 308 GID-VVW--DGTLIASCATDGLVRIWDTSTGQCLRTLV-HEDNPPVSSVK-FSPNGKYVL 362
Query: 600 SAGYDGKTIVWDIWEGIPIRIYE 622
+ D +WD EG ++ Y+
Sbjct: 363 AWTLDDCVRLWDYVEGRCLKTYQ 385
Score = 48 (22.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 13/59 (22%), Positives = 22/59 (37%)
Query: 554 FVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNP-RIAMSAGYDGKTIVWD 611
F ++ D I W+ ++ + H +D R +S G DG VW+
Sbjct: 414 FAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTCSTGEGRFMVSCGLDGTVRVWE 472
Score = 37 (18.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 5/13 (38%), Positives = 9/13 (69%)
Query: 484 IVTCSRDGSAIIW 496
+V+C DG+ +W
Sbjct: 459 MVSCGLDGTVRVW 471
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 133 (51.9 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 36/126 (28%), Positives = 53/126 (42%)
Query: 236 IKRVRGHRNAVYCAIFDRS-GRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
++ + H + V + +S GR + TG DD V +WS+ C+ S GH I
Sbjct: 13 LQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQIS 72
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
IRVW L + L GH A + ++ F P GS + S S D
Sbjct: 73 AKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPY-GSF--VASGSLDTDI 129
Query: 355 RIWDAR 360
++WD R
Sbjct: 130 KLWDVR 135
Score = 127 (49.8 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 32/129 (24%), Positives = 53/129 (41%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
V K + + GH + ++ GS +++W +E A L + GH+ +I
Sbjct: 50 VNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANIC 109
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D I++W + I + HT AV + FSP G L S++
Sbjct: 110 SLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSP-DGK--WLASAA 166
Query: 350 DDGTCRIWD 358
DD T ++WD
Sbjct: 167 DDHTVKLWD 175
Score = 79 (32.9 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 18/73 (24%), Positives = 37/73 (50%)
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
+ V + +S D +++ +A D + +W+ G ++ TGH V++ HP + ++
Sbjct: 148 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHP-SIEYLLA 206
Query: 601 AGYDGKTI-VWDI 612
+G TI WD+
Sbjct: 207 SGSSSMTIRFWDL 219
Score = 49 (22.3 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 1486 GNIRAVEFCKVESLEYATASGSGDSCCKMTLKFID 1520
G + VEF S+EY ASGS MT++F D
Sbjct: 190 GPVNVVEFHP--SIEYLLASGSSS----MTIRFWD 218
>UNIPROTKB|I3LLQ2 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000024996 Uniprot:I3LLQ2
Length = 354
Score = 125 (49.1 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 34/127 (26%), Positives = 51/127 (40%)
Query: 237 KRVRGHRNAVYCAIFDRSG-RYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT--DXXX 293
K V H N + F S + ++T S D +W +E+ L S GH D+ D
Sbjct: 147 KSVAMHTNYLSACSFTNSDMQQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAP 206
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D VW + G I H + + ++ + P G + S SDD T
Sbjct: 207 SETGNTFVSGGCDKKAMVWDMRSGQCIQAFETHESDINSVRYYPS-GDAFA--SGSDDAT 263
Query: 354 CRIWDAR 360
CR++D R
Sbjct: 264 CRLYDLR 270
Score = 79 (32.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 22/69 (31%), Positives = 28/69 (40%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G + + +SL R + A D I VW+ GS V L GH L V P S
Sbjct: 286 GASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFC-SG 344
Query: 602 GYDGKTIVW 610
+D VW
Sbjct: 345 SWDHTLRVW 353
Score = 73 (30.8 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 326 HTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPS 385
HT ++A +F+ + Q+L++S DGTC +WD Q + +D + ++APS
Sbjct: 152 HTNYLSACSFTN--SDMQQILTASGDGTCALWDVESGQLLQSFH-GHGADVLC-LDLAPS 207
Query: 386 SS 387
+
Sbjct: 208 ET 209
Score = 62 (26.9 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 233 MQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMET 274
M+ + ++GH N V C + + R +++ S D V +W T
Sbjct: 53 MKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFT 94
Score = 58 (25.5 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 19/57 (33%), Positives = 26/57 (45%)
Query: 404 GTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQF--SGCAVAS 458
G FV+G D A VW+ + I HE+D+N V++ SG A AS
Sbjct: 210 GNTFVSGGCDKKAMVWDM---------RSGQCIQAFETHESDINSVRYYPSGDAFAS 257
Score = 53 (23.7 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS--GCAVA 457
F+ +G + G +D VW+ K + + +L GHEN V+ ++ S G A
Sbjct: 292 FSLSGRLLFAGYNDYTINVWDVLKGS---------RVSILFGHENRVSTLRVSPDGTAFC 342
Query: 458 S 458
S
Sbjct: 343 S 343
Score = 47 (21.6 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 403 NGTVFVTGSSDTLARVW 419
+GT F +GS D RVW
Sbjct: 337 DGTAFCSGSWDHTLRVW 353
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 157 (60.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 43/147 (29%), Positives = 61/147 (41%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+ GH V ++ SGR++ T DR ++W +E + GH + D
Sbjct: 319 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS 378
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D RVW L G I L GH + I FSP G Y + + S D TC++WD
Sbjct: 379 LAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPN-G--YHIATGSGDNTCKVWD 435
Query: 359 ARYSQFSPRIY-IPRPSDAVAGRNMAP 384
R + +Y IP + V G P
Sbjct: 436 LRQRRC---VYTIPAHQNLVTGVKFEP 459
Score = 130 (50.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 35/148 (23%), Positives = 54/148 (36%)
Query: 210 HHRAPSIRAACYAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKI 269
H + CY + ++ + I GH VY F + G TG D ++
Sbjct: 332 HPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRV 391
Query: 270 WSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAA 329
W + T C+ GH +I D +VW L + + H
Sbjct: 392 WDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNL 451
Query: 330 VTAIAFSPRPGSVYQLLSSSDDGTCRIW 357
VT + F P G+ LL+ + D T +IW
Sbjct: 452 VTGVKFEPIHGNF--LLTGAYDNTAKIW 477
Score = 51 (23.0 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 15/61 (24%), Positives = 23/61 (37%)
Query: 550 LDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIV 609
+ F+L D +W S + +L GH LD+ IA + YD +
Sbjct: 460 IHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIA-TCSYDRTFKL 518
Query: 610 W 610
W
Sbjct: 519 W 519
Score = 48 (22.0 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 578 LTGHTESTYVLDVHP-FNPRIAMSAGYDGKTIVWDI 612
LTG ++T + HP ++P + AG++GK + DI
Sbjct: 466 LTGAYDNTAKIWTHPGWSP-LKTLAGHEGKVMGLDI 500
Score = 44 (20.5 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 403 NGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDV 446
+G +TG+ D A++W T P + L+GHE V
Sbjct: 461 HGNFLLTGAYDNTAKIW------THPGWSP---LKTLAGHEGKV 495
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 157 (60.3 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 43/147 (29%), Positives = 61/147 (41%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+ GH V ++ SGR++ T DR ++W +E + GH + D
Sbjct: 334 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS 393
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D RVW L G I L GH + I FSP G Y + + S D TC++WD
Sbjct: 394 LAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPN-G--YHIATGSGDNTCKVWD 450
Query: 359 ARYSQFSPRIY-IPRPSDAVAGRNMAP 384
R + +Y IP + V G P
Sbjct: 451 LRQRRC---VYTIPAHQNLVTGVKFEP 474
Score = 130 (50.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 35/148 (23%), Positives = 54/148 (36%)
Query: 210 HHRAPSIRAACYAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKI 269
H + CY + ++ + I GH VY F + G TG D ++
Sbjct: 347 HPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRV 406
Query: 270 WSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAA 329
W + T C+ GH +I D +VW L + + H
Sbjct: 407 WDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNL 466
Query: 330 VTAIAFSPRPGSVYQLLSSSDDGTCRIW 357
VT + F P G+ LL+ + D T +IW
Sbjct: 467 VTGVKFEPIHGNF--LLTGAYDNTAKIW 492
Score = 51 (23.0 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 15/61 (24%), Positives = 23/61 (37%)
Query: 550 LDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIV 609
+ F+L D +W S + +L GH LD+ IA + YD +
Sbjct: 475 IHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIA-TCSYDRTFKL 533
Query: 610 W 610
W
Sbjct: 534 W 534
Score = 48 (22.0 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 578 LTGHTESTYVLDVHP-FNPRIAMSAGYDGKTIVWDI 612
LTG ++T + HP ++P + AG++GK + DI
Sbjct: 481 LTGAYDNTAKIWTHPGWSP-LKTLAGHEGKVMGLDI 515
Score = 44 (20.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 403 NGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDV 446
+G +TG+ D A++W T P + L+GHE V
Sbjct: 476 HGNFLLTGAYDNTAKIW------THPGWSP---LKTLAGHEGKV 510
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 157 (60.3 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 43/147 (29%), Positives = 61/147 (41%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+ GH V ++ SGR++ T DR ++W +E + GH + D
Sbjct: 336 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS 395
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D RVW L G I L GH + I FSP G Y + + S D TC++WD
Sbjct: 396 LAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPN-G--YHIATGSGDNTCKVWD 452
Query: 359 ARYSQFSPRIY-IPRPSDAVAGRNMAP 384
R + +Y IP + V G P
Sbjct: 453 LRQRRC---VYTIPAHQNLVTGVKFEP 476
Score = 130 (50.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 35/148 (23%), Positives = 54/148 (36%)
Query: 210 HHRAPSIRAACYAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKI 269
H + CY + ++ + I GH VY F + G TG D ++
Sbjct: 349 HPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRV 408
Query: 270 WSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAA 329
W + T C+ GH +I D +VW L + + H
Sbjct: 409 WDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNL 468
Query: 330 VTAIAFSPRPGSVYQLLSSSDDGTCRIW 357
VT + F P G+ LL+ + D T +IW
Sbjct: 469 VTGVKFEPIHGNF--LLTGAYDNTAKIW 494
Score = 51 (23.0 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 15/61 (24%), Positives = 23/61 (37%)
Query: 550 LDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIV 609
+ F+L D +W S + +L GH LD+ IA + YD +
Sbjct: 477 IHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIA-TCSYDRTFKL 535
Query: 610 W 610
W
Sbjct: 536 W 536
Score = 48 (22.0 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 578 LTGHTESTYVLDVHP-FNPRIAMSAGYDGKTIVWDI 612
LTG ++T + HP ++P + AG++GK + DI
Sbjct: 483 LTGAYDNTAKIWTHPGWSP-LKTLAGHEGKVMGLDI 517
Score = 44 (20.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 403 NGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDV 446
+G +TG+ D A++W T P + L+GHE V
Sbjct: 478 HGNFLLTGAYDNTAKIW------THPGWSP---LKTLAGHEGKV 512
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 146 (56.5 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 39/133 (29%), Positives = 62/133 (46%)
Query: 236 IKRVR-GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
++RV GHR AV FD +Y+++ S DR +K+WS T + + GH+ I
Sbjct: 306 LRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIA--CLQ 361
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D IR+W + G + VL GH V I F + +++S + DG
Sbjct: 362 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK-----RIVSGAYDGKI 416
Query: 355 RIWDARYSQFSPR 367
++WD + + PR
Sbjct: 417 KVWDLQ-AALDPR 428
Score = 125 (49.1 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 36/135 (26%), Positives = 59/135 (43%)
Query: 233 MQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
++ +K + GH +V C +D R ++TGS D V++W + T L + H +
Sbjct: 221 LECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR 278
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPIS---VLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D I VW + I+ VL GH AAV + F + Y ++S+S
Sbjct: 279 FSNGLMVTCSK--DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK----Y-IVSAS 331
Query: 350 DDGTCRIWDARYSQF 364
D T ++W +F
Sbjct: 332 GDRTIKVWSTSTCEF 346
Score = 109 (43.4 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 33/127 (25%), Positives = 54/127 (42%)
Query: 235 NIKRVR---GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDX 291
N++R++ + VYC +D +I+G D +KIW + CL GH G +
Sbjct: 180 NLQRIQCRSENSKGVYCLQYDDDK--IISGLRDNSIKIWDKSSLECLKVLTGHTGSVL-- 235
Query: 292 XXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDD 351
D +RVW + G ++ L H AV + FS G +++ S D
Sbjct: 236 CLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN--GL---MVTCSKD 290
Query: 352 GTCRIWD 358
+ +WD
Sbjct: 291 RSIAVWD 297
Score = 88 (36.0 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 22/80 (27%), Positives = 39/80 (48%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN++ D++++++A D I VW+ + V +L GH L + R+ +S
Sbjct: 317 VNVV--DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ---YRDRLVVSGS 371
Query: 603 YDGKTIVWDIWEGIPIRIYE 622
D +WDI G +R+ E
Sbjct: 372 SDNTIRLWDIECGACLRVLE 391
Score = 83 (34.3 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
RG+ + + +R V++ D I +W+ G+ + L GH E V + N RI +S
Sbjct: 355 RGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRI-VS 409
Query: 601 AGYDGKTIVWDI 612
YDGK VWD+
Sbjct: 410 GAYDGKIKVWDL 421
>RGD|620694 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog (C.
elegans)" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620694
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0 EMBL:AY029526
IPI:IPI00197468 RefSeq:NP_476543.1 UniGene:Rn.54978
ProteinModelPortal:Q99M63 STRING:Q99M63 PRIDE:Q99M63 GeneID:117541
KEGG:rno:117541 UCSC:RGD:620694 InParanoid:Q99M63 NextBio:620357
Genevestigator:Q99M63 GermOnline:ENSRNOG00000007671 Uniprot:Q99M63
Length = 513
Score = 159 (61.0 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 64/265 (24%), Positives = 109/265 (41%)
Query: 244 NAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASC-RGHEGDITDXXXXXXXXXXXX 302
+AV C F R + TG+ D +K+W +++ CL R H +T
Sbjct: 265 DAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILS 324
Query: 303 XXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYS 362
D IR+ L G + RGH++ V F+ + G + ++S+S DGT +IW+ + +
Sbjct: 325 ASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFT-QDG--HYIISASSDGTVKIWNMKTT 381
Query: 363 QFSPRIYIPRPSDAVAGRNMAPSS----SAGPQSHQIFCCAFNANGTVFVTGSSDTLARV 418
+ S + + AG ++ +S P+ H + C N + TV + + R
Sbjct: 382 ECSNTF---KSLGSTAGTDITVNSVILLPKNPE-HFVVC---NRSNTVVIMNMQGQIVRS 434
Query: 419 WNACKPNTDD----SDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTPKF 474
+++ K D + P E G E+ V Y FS V + + E
Sbjct: 435 FSSGKREGGDFVCCALSPRGEWIYCVG-EDFVLYC-FS--TVTGKLERTLTVHEKDVIGI 490
Query: 475 KNSWFCHDNIV-TCSRDGSAIIWIP 498
+ H N++ T S DG +W P
Sbjct: 491 AHH--PHQNLIATYSEDGLLKLWKP 513
Score = 48 (22.0 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 43 LDVDVDLREVYFLIMHFLSTGPCHRTYGQFWNE 75
+ ++++ +V LIM +L HR F E
Sbjct: 1 MSIEIESSDVIRLIMQYLKENSLHRALATFTEE 33
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 142 (55.0 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 49/191 (25%), Positives = 74/191 (38%)
Query: 231 QKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
Q + IK + GH + V F +G YV++ S DR +K+W + T YC+ + GH +
Sbjct: 181 QSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRM 240
Query: 291 XXXXXXXXXXXXXXXDCIIRVWRLPDGLPISV-LRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D IRVW L + V LR H V IA++P + ++
Sbjct: 241 VRVHIEGSIFATCSNDQTIRVW-LTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAG 299
Query: 350 DDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVT 409
D + R R D G + S + + AF+ G V+
Sbjct: 300 ADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSG---HDNWVRGLAFHPGGKYLVS 356
Query: 410 GSSDTLARVWN 420
S D RVW+
Sbjct: 357 ASDDKTIRVWD 367
Score = 135 (52.6 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 33/119 (27%), Positives = 54/119 (45%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GHR ++ IF +++ S+D ++IW ET S +GH + D
Sbjct: 106 GHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLL 165
Query: 301 XXXXXDCIIRVWRLPDGLP-ISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D I++W I + GH V+++AF P G Y +LS+S D T ++W+
Sbjct: 166 ASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPA-GD-Y-VLSASRDRTIKMWE 221
Score = 135 (52.6 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 38/187 (20%), Positives = 76/187 (40%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAY-CLASCRGHEGDITDXXXXX 295
+ ++GH ++V FD G+ + + S D +K+W + +Y C+ + GH+ +++
Sbjct: 144 RSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVP 203
Query: 296 XXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D I++W + G + GH V + GS++ + S+D T R
Sbjct: 204 AGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIE-GSIFA--TCSNDQTIR 260
Query: 356 IWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNAN--GTVFVTGSSD 413
+W ++ + V AP ++A + + G +GS D
Sbjct: 261 VWLTNSKDC--KVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRD 318
Query: 414 TLARVWN 420
R+W+
Sbjct: 319 KTIRIWD 325
Score = 70 (29.7 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 554 FVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI-VWDI 612
F+ + D I +W+ + G + +L+GH L HP + +SA D KTI VWD+
Sbjct: 311 FLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHP-GGKYLVSAS-DDKTIRVWDL 368
Score = 69 (29.3 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 19/57 (33%), Positives = 26/57 (45%)
Query: 554 FVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVW 610
+VL+A D I +W A G V + TGH E ++ VH I + D VW
Sbjct: 207 YVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVH-IEGSIFATCSNDQTIRVW 262
Score = 57 (25.1 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 14/59 (23%), Positives = 28/59 (47%)
Query: 553 RFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWD 611
+++++A D I VW+ + + +L H +D H +P + +S D VW+
Sbjct: 352 KYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYV-ISGSVDQTVKVWE 409
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 157 (60.3 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 43/147 (29%), Positives = 61/147 (41%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+ GH V ++ SGR++ T DR ++W +E + GH + D
Sbjct: 318 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS 377
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D RVW L G I L GH + I FSP G Y + + S D TC++WD
Sbjct: 378 LAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPN-G--YHIATGSGDNTCKVWD 434
Query: 359 ARYSQFSPRIY-IPRPSDAVAGRNMAP 384
R + +Y IP + V G P
Sbjct: 435 LRQRRC---VYTIPAHQNLVTGVKFEP 458
Score = 129 (50.5 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 35/148 (23%), Positives = 53/148 (35%)
Query: 210 HHRAPSIRAACYAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKI 269
H + CY + ++ + I GH VY F + G TG D ++
Sbjct: 331 HPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRV 390
Query: 270 WSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAA 329
W + T C+ GH +I D +VW L + + H
Sbjct: 391 WDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNL 450
Query: 330 VTAIAFSPRPGSVYQLLSSSDDGTCRIW 357
VT + F P G LL+ + D T +IW
Sbjct: 451 VTGVKFEPIHGDF--LLTGAYDNTAKIW 476
Score = 50 (22.7 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 15/57 (26%), Positives = 22/57 (38%)
Query: 554 FVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVW 610
F+L D +W S + +L GH LD+ IA + YD +W
Sbjct: 463 FLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIA-TCSYDRTFKLW 518
Score = 48 (22.0 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 578 LTGHTESTYVLDVHP-FNPRIAMSAGYDGKTIVWDI 612
LTG ++T + HP ++P + AG++GK + DI
Sbjct: 465 LTGAYDNTAKIWTHPGWSP-LKTLAGHEGKVMGLDI 499
Score = 43 (20.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 403 NGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDV 446
+G +TG+ D A++W T P + L+GHE V
Sbjct: 460 HGDFLLTGAYDNTAKIW------THPGWSP---LKTLAGHEGKV 494
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 146 (56.5 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 39/133 (29%), Positives = 62/133 (46%)
Query: 236 IKRVR-GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
++RV GHR AV FD +Y+++ S DR +K+WS T + + GH+ I
Sbjct: 323 LRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIA--CLQ 378
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D IR+W + G + VL GH V I F + +++S + DG
Sbjct: 379 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK-----RIVSGAYDGKI 433
Query: 355 RIWDARYSQFSPR 367
++WD + + PR
Sbjct: 434 KVWDLQ-AALDPR 445
Score = 125 (49.1 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 36/135 (26%), Positives = 59/135 (43%)
Query: 233 MQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
++ +K + GH +V C +D R ++TGS D V++W + T L + H +
Sbjct: 238 LECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR 295
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPIS---VLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D I VW + I+ VL GH AAV + F + Y ++S+S
Sbjct: 296 FSNGLMVTCSK--DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK----Y-IVSAS 348
Query: 350 DDGTCRIWDARYSQF 364
D T ++W +F
Sbjct: 349 GDRTIKVWSTSTCEF 363
Score = 109 (43.4 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 33/127 (25%), Positives = 54/127 (42%)
Query: 235 NIKRVR---GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDX 291
N++R++ + VYC +D +I+G D +KIW + CL GH G +
Sbjct: 197 NLQRIQCRSENSKGVYCLQYD--DEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVL-- 252
Query: 292 XXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDD 351
D +RVW + G ++ L H AV + FS G +++ S D
Sbjct: 253 CLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN--GL---MVTCSKD 307
Query: 352 GTCRIWD 358
+ +WD
Sbjct: 308 RSIAVWD 314
Score = 88 (36.0 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 22/80 (27%), Positives = 39/80 (48%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN++ D++++++A D I VW+ + V +L GH L + R+ +S
Sbjct: 334 VNVV--DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ---YRDRLVVSGS 388
Query: 603 YDGKTIVWDIWEGIPIRIYE 622
D +WDI G +R+ E
Sbjct: 389 SDNTIRLWDIECGACLRVLE 408
Score = 83 (34.3 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
RG+ + + +R V++ D I +W+ G+ + L GH E V + N RI +S
Sbjct: 372 RGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRI-VS 426
Query: 601 AGYDGKTIVWDI 612
YDGK VWD+
Sbjct: 427 GAYDGKIKVWDL 438
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 146 (56.5 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 39/133 (29%), Positives = 62/133 (46%)
Query: 236 IKRVR-GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
++RV GHR AV FD +Y+++ S DR +K+WS T + + GH+ I
Sbjct: 323 LRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIA--CLQ 378
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D IR+W + G + VL GH V I F + +++S + DG
Sbjct: 379 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK-----RIVSGAYDGKI 433
Query: 355 RIWDARYSQFSPR 367
++WD + + PR
Sbjct: 434 KVWDLQ-AALDPR 445
Score = 125 (49.1 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 36/135 (26%), Positives = 59/135 (43%)
Query: 233 MQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
++ +K + GH +V C +D R ++TGS D V++W + T L + H +
Sbjct: 238 LECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR 295
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPIS---VLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D I VW + I+ VL GH AAV + F + Y ++S+S
Sbjct: 296 FSNGLMVTCSK--DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK----Y-IVSAS 348
Query: 350 DDGTCRIWDARYSQF 364
D T ++W +F
Sbjct: 349 GDRTIKVWSTSTCEF 363
Score = 109 (43.4 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 33/127 (25%), Positives = 54/127 (42%)
Query: 235 NIKRVR---GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDX 291
N++R++ + VYC +D +I+G D +KIW + CL GH G +
Sbjct: 197 NLQRIQCRSENSKGVYCLQYD--DEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVL-- 252
Query: 292 XXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDD 351
D +RVW + G ++ L H AV + FS G +++ S D
Sbjct: 253 CLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN--GL---MVTCSKD 307
Query: 352 GTCRIWD 358
+ +WD
Sbjct: 308 RSIAVWD 314
Score = 88 (36.0 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 22/80 (27%), Positives = 39/80 (48%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN++ D++++++A D I VW+ + V +L GH L + R+ +S
Sbjct: 334 VNVV--DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ---YRDRLVVSGS 388
Query: 603 YDGKTIVWDIWEGIPIRIYE 622
D +WDI G +R+ E
Sbjct: 389 SDNTIRLWDIECGACLRVLE 408
Score = 83 (34.3 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
RG+ + + +R V++ D I +W+ G+ + L GH E V + N RI +S
Sbjct: 372 RGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRI-VS 426
Query: 601 AGYDGKTIVWDI 612
YDGK VWD+
Sbjct: 427 GAYDGKIKVWDL 438
>UNIPROTKB|J9NS21 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
RefSeq:XP_003432082.1 ProteinModelPortal:J9NS21
Ensembl:ENSCAFT00000049144 GeneID:482620 KEGG:cfa:482620
Uniprot:J9NS21
Length = 1250
Score = 138 (53.6 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 41/187 (21%), Positives = 78/187 (41%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT--DX 291
+ + ++ H + V C F R++ T S D+ VKIW+ T + H +
Sbjct: 649 EKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHF 708
Query: 292 XXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSS-SD 350
DC +++W L + + GHT +V FSP +LL+S S
Sbjct: 709 TNNSHYLLLATASSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDD----KLLASCSA 764
Query: 351 DGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIF--CCAFNANGTVFV 408
DGT ++WD + + I + + +S + ++ CC+++A+GT +
Sbjct: 765 DGTLKLWDVKSANERKSINV---------KQFFLNSEEPQEDMEVIVKCCSWSADGTRIM 815
Query: 409 TGSSDTL 415
+ + +
Sbjct: 816 VAAKNKI 822
Score = 114 (45.2 bits), Expect = 0.00025, Sum P(4) = 0.00025
Identities = 32/131 (24%), Positives = 58/131 (44%)
Query: 231 QKMQNIKR--VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDI 288
+ ++N+ R VR H +AVY A F G+ + + D+ ++++ ET L + HE ++
Sbjct: 602 KNIKNLSRLVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEV 661
Query: 289 TDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSS 348
D +++W G + V H+ V F+ S Y LL++
Sbjct: 662 LCCAFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNN--SHYLLLAT 719
Query: 349 -SDDGTCRIWD 358
S D ++WD
Sbjct: 720 ASSDCFLKLWD 730
Score = 73 (30.8 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDV 446
+ C F+ +G+ F+T S D R+W K + + EIDV+ EN+V
Sbjct: 886 VHCVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSAIVLKQEIDVVF-QENEV 936
Score = 57 (25.1 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 26/110 (23%), Positives = 50/110 (45%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKT 607
+S N + A+ C + +WN V GH + + P S+ D +T
Sbjct: 849 FSPQNHLAVVALSQCCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSS--DDQT 906
Query: 608 I-VWD---IWEGIPIRI-YEISR-FRDGASIILS-DDVGQLYILN--TGQ 648
I +W+ + + I + EI F++ ++L+ D++ +L ++N TGQ
Sbjct: 907 IRLWETKKVCKNSAIVLKQEIDVVFQENEVMVLAVDNIKRLQLINGKTGQ 956
Score = 56 (24.8 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 23/109 (21%), Positives = 39/109 (35%)
Query: 550 LDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIV 609
L N +L+ D + +W+ G + H ++ D+ P + + S D +
Sbjct: 1054 LKNSKLLSWSFDGTVKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFS-STSADKTAKI 1112
Query: 610 WDIWEGIPIR-------IYEISRFR-DGASIILSDDVGQLYILNTGQGE 650
W P+ S F D + DD G++ I N GE
Sbjct: 1113 WSFELLSPLHELRGHKGCVRCSVFSVDSTLLATGDDNGEIRIWNVSNGE 1161
Score = 56 (24.8 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 20/73 (27%), Positives = 31/73 (42%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V I ++ D + ++++ D I VWN V L H E+ V D +S
Sbjct: 1007 VRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYVF-LQAHQET--VKDFKLLKNSKLLSWS 1063
Query: 603 YDGKTIVWDIWEG 615
+DG +W I G
Sbjct: 1064 FDGTVKIWSIITG 1076
Score = 55 (24.4 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 27/117 (23%), Positives = 48/117 (41%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLT-------GHTESTYVLDVHPFNP 595
V V+S+D+ + + I +WN ++G L+H T +V D+ F+P
Sbjct: 1131 VRCSVFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPILVEEGAATHGGWVTDLC-FSP 1189
Query: 596 RIAMSAGYDGKTIVWDIWEGIPIRIY--------EISRFRDGASIILSDDVGQLYIL 644
M G W++ G + + +I D + + D++G LYIL
Sbjct: 1190 DSKMLVSAGGYLKWWNVVTGESSQTFYTNGTCLKKIHVSSDFKTYVTVDNLGILYIL 1246
Score = 53 (23.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 397 CCAFNANGTVFVTGSSDTLARVWN 420
C F+ + T+ TG + R+WN
Sbjct: 1133 CSVFSVDSTLLATGDDNGEIRIWN 1156
Score = 50 (22.7 bits), Expect = 6.1e-05, Sum P(3) = 6.1e-05
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 393 HQ--IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQ 450
HQ + C + + T F + S+D A++W+ + P HE L GH+ V
Sbjct: 1085 HQDTVLSCDISPDATKFSSTSADKTAKIWSF------ELLSPLHE---LRGHKGCVRCSV 1135
Query: 451 FS 452
FS
Sbjct: 1136 FS 1137
Score = 40 (19.1 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 948 ISLDDSEDVTKLDTPESHVNAGIRRLVLKLPVRDSNKHE 986
+S D S D TK + + A I L P+ + H+
Sbjct: 1090 LSCDISPDATKFSSTSADKTAKIWSFELLSPLHELRGHK 1128
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 141 (54.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 41/187 (21%), Positives = 76/187 (40%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ ++GH ++V FD SG+ + + S D +K+W + C+ + GH+ +++
Sbjct: 79 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 138
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSS-SDDGTCR 355
D I++W + G + GH V + RP L++S S+D T R
Sbjct: 139 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV----RPNQDGTLIASCSNDQTVR 194
Query: 356 IWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNAN--GTVFVTGSSD 413
+W + + V + AP SS S + G ++GS D
Sbjct: 195 VWVVATKECKAELR--EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 252
Query: 414 TLARVWN 420
++W+
Sbjct: 253 KTIKMWD 259
Score = 130 (50.8 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 30/120 (25%), Positives = 53/120 (44%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GHR+ V IF +++ S+D +K+W ET + +GH + D
Sbjct: 41 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 100
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
D I++W I + GH V+++A P G ++S+S D T ++W+ +
Sbjct: 101 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN-GD--HIVSASRDKTIKMWEVQ 157
Score = 114 (45.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 28/119 (23%), Positives = 53/119 (44%)
Query: 231 QKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
Q + I+ + GH + V +G ++++ S D+ +K+W ++T YC+ + GH +
Sbjct: 115 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 174
Query: 291 XXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D +RVW + + LR H V I+++P S Y +S +
Sbjct: 175 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEA 231
Score = 60 (26.2 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 15/69 (21%), Positives = 30/69 (43%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V +++ +F+L+ D + VW+ + + +L H LD H P + ++
Sbjct: 276 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV-VTGS 334
Query: 603 YDGKTIVWD 611
D VW+
Sbjct: 335 VDQTVKVWE 343
Score = 57 (25.1 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 554 FVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI-VWD 611
F+L+ D I +W+ + G + +L GH + H I A D KT+ VWD
Sbjct: 245 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA--DDKTLRVWD 301
Score = 46 (21.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 11/44 (25%), Positives = 17/44 (38%)
Query: 380 RNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACK 423
+N + H + F+ VTGS D +VW C+
Sbjct: 303 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE-CR 345
>UNIPROTKB|E1BS49 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006952 "defense response" evidence=IEA] [GO:0043531
"ADP binding" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IEA] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IEA] [GO:0016505
"apoptotic protease activator activity" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0051402 "neuron apoptotic
process" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0005634 GO:GO:0005794
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051402
GO:GO:0043531 GO:GO:0006309 GO:GO:0008635 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293 GO:GO:0016505
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AADN02005970
IPI:IPI00822148 ProteinModelPortal:E1BS49
Ensembl:ENSGALT00000038230 ArrayExpress:E1BS49 Uniprot:E1BS49
Length = 1254
Score = 131 (51.2 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 35/136 (25%), Positives = 60/136 (44%)
Query: 231 QKMQNIKR--VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDI 288
+ ++N+ R VR HR+AVY A F R + + + D+ ++++ E+ L H+ +I
Sbjct: 600 KSLKNLSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEI 659
Query: 289 TDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSS 348
D +++W G + V HT V F+ R G Y L +
Sbjct: 660 LCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQ-YLLATC 718
Query: 349 SDD----GTCRIWDAR 360
SDD T ++WD +
Sbjct: 719 SDDTYIKNTVQLWDLK 734
Score = 125 (49.1 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 35/131 (26%), Positives = 53/131 (40%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT--DX 291
+ + + H + + C F +YV T S D+ VKIW+ T CL H +
Sbjct: 647 ERLLEISAHDDEILCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQF 706
Query: 292 XXXXXXXXXXXXXXDCIIR----VWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLS 347
D I+ +W L D + + GH AV+ FSP Y + S
Sbjct: 707 NNRRGQYLLATCSDDTYIKNTVQLWDLKDKYCRNTMFGHVNAVSHCRFSPNDD--Y-IAS 763
Query: 348 SSDDGTCRIWD 358
S DGT ++W+
Sbjct: 764 CSTDGTVKLWN 774
Score = 74 (31.1 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDV 446
+ C F+++G++F+T S D R+W K E+DV+ H +V
Sbjct: 888 VHCVTFSSDGSLFLTSSEDQTIRIWETNKVCKSSDAVLKSELDVVF-HNGEV 938
Score = 62 (26.9 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 16/51 (31%), Positives = 22/51 (43%)
Query: 566 VWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYD-GKTIVWDIWEG 615
+W+ S++H L GH P N +A G D G +WDI G
Sbjct: 1117 IWSFESSSVLHELKGHEACVRCSAFSPSNKLLA--TGDDKGDIRIWDILTG 1165
Score = 59 (25.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS 452
+ CA + +G+ F + S+D A++W+ +S HE L GHE V FS
Sbjct: 1094 VLSCAVSPDGSRFSSTSADKTAKIWSF------ESSSVLHE---LKGHEACVRCSAFS 1142
Score = 56 (24.8 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 19/68 (27%), Positives = 31/68 (45%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKT 607
++ D + ++++ D I VWN V L GH E+ + D +S +DG
Sbjct: 1017 FTTDCQTLISSAHDAVIQVWNWQLNECVF-LKGHKEA--IKDFAFLENSKLLSWSFDGTV 1073
Query: 608 IVWDIWEG 615
VW+I G
Sbjct: 1074 KVWNITTG 1081
Score = 56 (24.8 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 19/73 (26%), Positives = 30/73 (41%)
Query: 566 VWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIRIYEISR 625
+W+ D +++ GH + P + IA S DG +W++ +R EI
Sbjct: 730 LWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYIA-SCSTDGTVKLWNVHSANELRTIEIKD 788
Query: 626 FRDGASIILSDDV 638
F A DDV
Sbjct: 789 FFRNADE-QQDDV 800
Score = 49 (22.3 bits), Expect = 8.1e-05, Sum P(3) = 8.1e-05
Identities = 24/100 (24%), Positives = 41/100 (41%)
Query: 398 CAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVA 457
C F + ++ + D + +VWN Q N E L GH+ + F +
Sbjct: 1015 CRFTTDCQTLISSAHDAVIQVWNW---------QLN-ECVFLKGHKEAIKDFAFLENSKL 1064
Query: 458 SRFSLADSSK--EDSTPKFKNSWFCHDN-IVTC--SRDGS 492
+S + K +T K + + CH +++C S DGS
Sbjct: 1065 LSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGS 1104
Score = 48 (22.0 bits), Expect = 6.6e-06, Sum P(3) = 6.6e-06
Identities = 15/61 (24%), Positives = 22/61 (36%)
Query: 550 LDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIV 609
L+N +L+ D + VWN G H + V P R + S D +
Sbjct: 1059 LENSKLLSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGSRFS-STSADKTAKI 1117
Query: 610 W 610
W
Sbjct: 1118 W 1118
Score = 45 (20.9 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 398 CAFNANGTVFVTGSSDTLARVWNACKPN 425
C F+ N + S+D ++WN N
Sbjct: 752 CRFSPNDDYIASCSTDGTVKLWNVHSAN 779
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 146 (56.5 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 39/133 (29%), Positives = 62/133 (46%)
Query: 236 IKRVR-GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
++RV GHR AV FD +Y+++ S DR +K+WS T + + GH+ I
Sbjct: 340 LRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIA--CLQ 395
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D IR+W + G + VL GH V I F + +++S + DG
Sbjct: 396 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK-----RIVSGAYDGKI 450
Query: 355 RIWDARYSQFSPR 367
++WD + + PR
Sbjct: 451 KVWDLQ-AALDPR 462
Score = 125 (49.1 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 36/135 (26%), Positives = 59/135 (43%)
Query: 233 MQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
++ +K + GH +V C +D R ++TGS D V++W + T L + H +
Sbjct: 255 LECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR 312
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPIS---VLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D I VW + I+ VL GH AAV + F + Y ++S+S
Sbjct: 313 FSNGLMVTCSK--DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK----Y-IVSAS 365
Query: 350 DDGTCRIWDARYSQF 364
D T ++W +F
Sbjct: 366 GDRTIKVWSTSTCEF 380
Score = 109 (43.4 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 33/127 (25%), Positives = 54/127 (42%)
Query: 235 NIKRVR---GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDX 291
N++R++ + VYC +D +I+G D +KIW + CL GH G +
Sbjct: 214 NLQRIQCRSENSKGVYCLQYDDDK--IISGLRDNSIKIWDKSSLECLKVLTGHTGSVL-- 269
Query: 292 XXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDD 351
D +RVW + G ++ L H AV + FS G +++ S D
Sbjct: 270 CLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN--GL---MVTCSKD 324
Query: 352 GTCRIWD 358
+ +WD
Sbjct: 325 RSIAVWD 331
Score = 88 (36.0 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 22/80 (27%), Positives = 39/80 (48%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN++ D++++++A D I VW+ + V +L GH L + R+ +S
Sbjct: 351 VNVV--DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ---YRDRLVVSGS 405
Query: 603 YDGKTIVWDIWEGIPIRIYE 622
D +WDI G +R+ E
Sbjct: 406 SDNTIRLWDIECGACLRVLE 425
Score = 83 (34.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
RG+ + + +R V++ D I +W+ G+ + L GH E V + N RI +S
Sbjct: 389 RGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRI-VS 443
Query: 601 AGYDGKTIVWDI 612
YDGK VWD+
Sbjct: 444 GAYDGKIKVWDL 455
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 122 (48.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 27/123 (21%), Positives = 51/123 (41%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
KR+ GH + + + G Y ++GS D+ +++W + GH D+
Sbjct: 58 KRLYGHSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSAD 117
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLR-GHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D I++W ++ GHT V+ + FSP + ++S D T +
Sbjct: 118 NRQIVSGSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPI-IVSCGWDRTVK 176
Query: 356 IWD 358
+W+
Sbjct: 177 VWN 179
Score = 79 (32.9 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 552 NRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWD 611
N +++ D + VWN A+ L ++ GH + V P + + S G D K ++WD
Sbjct: 163 NPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSP-DGSLCTSGGKDSKALLWD 221
Query: 612 IWEG 615
+ +G
Sbjct: 222 LNDG 225
Score = 54 (24.1 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 15/71 (21%), Positives = 32/71 (45%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNP-RIAMSA 601
+N + S D + D + +W+ DG +++L H + +++ F+P R +
Sbjct: 196 LNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLE-HND---IINALCFSPNRYWLCV 251
Query: 602 GYDGKTIVWDI 612
Y +WD+
Sbjct: 252 AYGPSIKIWDL 262
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 146 (56.5 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 39/133 (29%), Positives = 62/133 (46%)
Query: 236 IKRVR-GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
++RV GHR AV FD +Y+++ S DR +K+WS T + + GH+ I
Sbjct: 342 LRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIA--CLQ 397
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D IR+W + G + VL GH V I F + +++S + DG
Sbjct: 398 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK-----RIVSGAYDGKI 452
Query: 355 RIWDARYSQFSPR 367
++WD + + PR
Sbjct: 453 KVWDLQ-AALDPR 464
Score = 125 (49.1 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 36/135 (26%), Positives = 59/135 (43%)
Query: 233 MQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
++ +K + GH +V C +D R ++TGS D V++W + T L + H +
Sbjct: 257 LECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR 314
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPIS---VLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D I VW + I+ VL GH AAV + F + Y ++S+S
Sbjct: 315 FSNGLMVTCSK--DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK----Y-IVSAS 367
Query: 350 DDGTCRIWDARYSQF 364
D T ++W +F
Sbjct: 368 GDRTIKVWSTSTCEF 382
Score = 109 (43.4 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 33/127 (25%), Positives = 54/127 (42%)
Query: 235 NIKRVR---GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDX 291
N++R++ + VYC +D +I+G D +KIW + CL GH G +
Sbjct: 216 NLQRIQCRSENSKGVYCLQYD--DEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVL-- 271
Query: 292 XXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDD 351
D +RVW + G ++ L H AV + FS G +++ S D
Sbjct: 272 CLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN--GL---MVTCSKD 326
Query: 352 GTCRIWD 358
+ +WD
Sbjct: 327 RSIAVWD 333
Score = 88 (36.0 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 22/80 (27%), Positives = 39/80 (48%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN++ D++++++A D I VW+ + V +L GH L + R+ +S
Sbjct: 353 VNVV--DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ---YRDRLVVSGS 407
Query: 603 YDGKTIVWDIWEGIPIRIYE 622
D +WDI G +R+ E
Sbjct: 408 SDNTIRLWDIECGACLRVLE 427
Score = 83 (34.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
RG+ + + +R V++ D I +W+ G+ + L GH E V + N RI +S
Sbjct: 391 RGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRI-VS 445
Query: 601 AGYDGKTIVWDI 612
YDGK VWD+
Sbjct: 446 GAYDGKIKVWDL 457
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 146 (56.5 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 39/133 (29%), Positives = 62/133 (46%)
Query: 236 IKRVR-GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
++RV GHR AV FD +Y+++ S DR +K+WS T + + GH+ I
Sbjct: 343 LRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIA--CLQ 398
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D IR+W + G + VL GH V I F + +++S + DG
Sbjct: 399 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK-----RIVSGAYDGKI 453
Query: 355 RIWDARYSQFSPR 367
++WD + + PR
Sbjct: 454 KVWDLQ-AALDPR 465
Score = 125 (49.1 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 36/135 (26%), Positives = 59/135 (43%)
Query: 233 MQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
++ +K + GH +V C +D R ++TGS D V++W + T L + H +
Sbjct: 258 LECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR 315
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPIS---VLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D I VW + I+ VL GH AAV + F + Y ++S+S
Sbjct: 316 FSNGLMVTCSK--DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK----Y-IVSAS 368
Query: 350 DDGTCRIWDARYSQF 364
D T ++W +F
Sbjct: 369 GDRTIKVWSTSTCEF 383
Score = 109 (43.4 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 33/127 (25%), Positives = 54/127 (42%)
Query: 235 NIKRVR---GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDX 291
N++R++ + VYC +D +I+G D +KIW + CL GH G +
Sbjct: 217 NLQRIQCRSENSKGVYCLQYD--DEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVL-- 272
Query: 292 XXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDD 351
D +RVW + G ++ L H AV + FS G +++ S D
Sbjct: 273 CLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN--GL---MVTCSKD 327
Query: 352 GTCRIWD 358
+ +WD
Sbjct: 328 RSIAVWD 334
Score = 88 (36.0 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 22/80 (27%), Positives = 39/80 (48%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN++ D++++++A D I VW+ + V +L GH L + R+ +S
Sbjct: 354 VNVV--DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ---YRDRLVVSGS 408
Query: 603 YDGKTIVWDIWEGIPIRIYE 622
D +WDI G +R+ E
Sbjct: 409 SDNTIRLWDIECGACLRVLE 428
Score = 83 (34.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
RG+ + + +R V++ D I +W+ G+ + L GH E V + N RI +S
Sbjct: 392 RGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRI-VS 446
Query: 601 AGYDGKTIVWDI 612
YDGK VWD+
Sbjct: 447 GAYDGKIKVWDL 458
>UNIPROTKB|F1RZC0 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 OMA:ATDGLHE EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000005105 Uniprot:F1RZC0
Length = 396
Score = 125 (49.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 34/127 (26%), Positives = 51/127 (40%)
Query: 237 KRVRGHRNAVYCAIFDRSG-RYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT--DXXX 293
K V H N + F S + ++T S D +W +E+ L S GH D+ D
Sbjct: 189 KSVAMHTNYLSACSFTNSDMQQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAP 248
Query: 294 XXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
D VW + G I H + + ++ + P G + S SDD T
Sbjct: 249 SETGNTFVSGGCDKKAMVWDMRSGQCIQAFETHESDINSVRYYPS-GDAFA--SGSDDAT 305
Query: 354 CRIWDAR 360
CR++D R
Sbjct: 306 CRLYDLR 312
Score = 79 (32.9 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 22/69 (31%), Positives = 28/69 (40%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G + + +SL R + A D I VW+ GS V L GH L V P S
Sbjct: 328 GASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFC-SG 386
Query: 602 GYDGKTIVW 610
+D VW
Sbjct: 387 SWDHTLRVW 395
Score = 73 (30.8 bits), Expect = 2.5e-05, Sum P(4) = 2.5e-05
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 326 HTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPS 385
HT ++A +F+ + Q+L++S DGTC +WD Q + +D + ++APS
Sbjct: 194 HTNYLSACSFTN--SDMQQILTASGDGTCALWDVESGQLLQSFH-GHGADVLC-LDLAPS 249
Query: 386 SS 387
+
Sbjct: 250 ET 251
Score = 62 (26.9 bits), Expect = 2.5e-05, Sum P(4) = 2.5e-05
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 233 MQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMET 274
M+ + ++GH N V C + + R +++ S D V +W T
Sbjct: 95 MKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFT 136
Score = 58 (25.5 bits), Expect = 2.5e-05, Sum P(4) = 2.5e-05
Identities = 19/57 (33%), Positives = 26/57 (45%)
Query: 404 GTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQF--SGCAVAS 458
G FV+G D A VW+ + I HE+D+N V++ SG A AS
Sbjct: 252 GNTFVSGGCDKKAMVWDM---------RSGQCIQAFETHESDINSVRYYPSGDAFAS 299
Score = 53 (23.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS--GCAVA 457
F+ +G + G +D VW+ K + + +L GHEN V+ ++ S G A
Sbjct: 334 FSLSGRLLFAGYNDYTINVWDVLKGS---------RVSILFGHENRVSTLRVSPDGTAFC 384
Query: 458 S 458
S
Sbjct: 385 S 385
Score = 47 (21.6 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 403 NGTVFVTGSSDTLARVW 419
+GT F +GS D RVW
Sbjct: 379 DGTAFCSGSWDHTLRVW 395
>ASPGD|ASPL0000054735 [details] [associations]
symbol:AN0292 species:162425 "Emericella nidulans"
[GO:0000124 "SAGA complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 HOGENOM:HOG000212424 ProteinModelPortal:C8VUA4
EnsemblFungi:CADANIAT00002423 OMA:GGIWSLS Uniprot:C8VUA4
Length = 606
Score = 157 (60.3 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 45/155 (29%), Positives = 66/155 (42%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH V C F + YV TGS DR V++W++ T + GH G+IT
Sbjct: 401 GHEQDVDCVCFHPNSAYVFTGSSDRTVRMWAVTTGNAVRMFTGHTGNITALACSRDGKTL 460
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGH-TAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA 359
I +W L G + +RGH + ++++S +V L+S DGT R+WD
Sbjct: 461 ASADDHGSILLWDLGPGRLLKRMRGHGKGGIWSLSWSVE-SNV--LVSGGADGTVRVWDV 517
Query: 360 RYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQ 394
P + AG + +SSA S Q
Sbjct: 518 MGPAHDPS-QGRVAGEGGAGTKIDGASSAAANSTQ 551
Score = 129 (50.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 31/119 (26%), Positives = 51/119 (42%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXX 299
+GH V+ + G Y ++G D+ ++W + GHE D+
Sbjct: 358 KGHDQPVWDLQWGPFGHYFVSGGHDKTARLWVTDHIRQQRIFVGHEQDVDCVCFHPNSAY 417
Query: 300 XXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D +R+W + G + + GHT +TA+A S R G L S+ D G+ +WD
Sbjct: 418 VFTGSSDRTVRMWAVTTGNAVRMFTGHTGNITALACS-RDGKT--LASADDHGSILLWD 473
Score = 115 (45.5 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 33/135 (24%), Positives = 54/135 (40%)
Query: 235 NIKRVRGHRNAVYCAIFDRSG------------RYVITGSDDRLVKIWSMETAYCLASCR 282
N +R+ GH VY F S R++++ S DR +++WS++ C+ +
Sbjct: 299 NSRRLIGHSGPVYAVAFAPSATPSENAVAPTNARWLLSSSADRTIRLWSLDLWQCMVVYK 358
Query: 283 GHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSV 342
GH+ + D D R+W + GH V + F P S
Sbjct: 359 GHDQPVWDLQWGPFGHYFVSGGHDKTARLWVTDHIRQQRIFVGHEQDVDCVCF--HPNSA 416
Query: 343 YQLLSSSDDGTCRIW 357
Y + + S D T R+W
Sbjct: 417 Y-VFTGSSDRTVRMW 430
Score = 64 (27.6 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 16/70 (22%), Positives = 29/70 (41%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
+ + S D + + +A I +W+ G L+ + GH + + +S G
Sbjct: 448 ITALACSRDGKTLASADDHGSILLWDLGPGRLLKRMRGHGKGGIWSLSWSVESNVLVSGG 507
Query: 603 YDGKTIVWDI 612
DG VWD+
Sbjct: 508 ADGTVRVWDV 517
Score = 55 (24.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDS 429
I+ +++ V V+G +D RVW+ P D S
Sbjct: 491 IWSLSWSVESNVLVSGGADGTVRVWDVMGPAHDPS 525
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 129 (50.5 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 35/154 (22%), Positives = 61/154 (39%)
Query: 225 KPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGH 284
KP + +K + + AV F+ G Y +T D+ +K+W+ L + GH
Sbjct: 7 KPRAPELPQKRMKTLDCSQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGH 66
Query: 285 EGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQ 344
++ D D + +W + G + RGH V + F+ +V
Sbjct: 67 GYEVLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEE-ATV-- 123
Query: 345 LLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVA 378
+LS S D + R WD R + P + D ++
Sbjct: 124 ILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGIS 157
Score = 101 (40.6 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 35/144 (24%), Positives = 58/144 (40%)
Query: 236 IKRVRGHRNAVYCAI--FDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
++ GH V A FD S ++ +G D+ V +W + T + RGH G +
Sbjct: 60 LRTYSGHGYEVLDAAGSFDNS--HLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQF 117
Query: 294 XXXXXXXXXXXXDCIIRVW----RLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D +R W R P+ P+ L ++++ S +++L+ S
Sbjct: 118 NEEATVILSGSIDSSVRCWDCRSRKPE--PVQTLDEARDGISSVKVSD-----HEILAGS 170
Query: 350 DDGTCRIWDARYSQFSPRIYIPRP 373
DG R +D R Q S Y+ P
Sbjct: 171 VDGRVRRYDLRMGQVSSD-YVGSP 193
Score = 71 (30.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 19/70 (27%), Positives = 32/70 (45%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLD--VHPFNPRIAMSAGYDG 605
+S D + L + +D + + + G L+ GH Y LD + + + +S DG
Sbjct: 199 FSRDGQCTLISSLDSTLRLLDKDTGELLGEYVGHKNQQYKLDCCLSERDTHV-VSCSEDG 257
Query: 606 KTIVWDIWEG 615
K WD+ EG
Sbjct: 258 KVFFWDLVEG 267
Score = 48 (22.0 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVW 610
V++ D ++ W+ +G+L +L + L HP P + + G G W
Sbjct: 250 VVSCSEDGKVFFWDLVEGALALALPVGSNVVQSLAYHPTEPCLLTAMG--GSIQYW 303
Score = 45 (20.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 483 NIVTCSRDGSAIIW 496
++V+CS DG W
Sbjct: 249 HVVSCSEDGKVFFW 262
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 146 (56.5 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 39/133 (29%), Positives = 62/133 (46%)
Query: 236 IKRVR-GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
++RV GHR AV FD +Y+++ S DR +K+WS T + + GH+ I
Sbjct: 355 LRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIA--CLQ 410
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D IR+W + G + VL GH V I F + +++S + DG
Sbjct: 411 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK-----RIVSGAYDGKI 465
Query: 355 RIWDARYSQFSPR 367
++WD + + PR
Sbjct: 466 KVWDLQ-AALDPR 477
Score = 125 (49.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 36/135 (26%), Positives = 59/135 (43%)
Query: 233 MQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
++ +K + GH +V C +D R ++TGS D V++W + T L + H +
Sbjct: 270 LECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR 327
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPIS---VLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D I VW + I+ VL GH AAV + F + Y ++S+S
Sbjct: 328 FSNGLMVTCSK--DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK----Y-IVSAS 380
Query: 350 DDGTCRIWDARYSQF 364
D T ++W +F
Sbjct: 381 GDRTIKVWSTSTCEF 395
Score = 109 (43.4 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 33/127 (25%), Positives = 54/127 (42%)
Query: 235 NIKRVR---GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDX 291
N++R++ + VYC +D +I+G D +KIW + CL GH G +
Sbjct: 229 NLQRIQCRSENSKGVYCLQYD--DEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVL-- 284
Query: 292 XXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDD 351
D +RVW + G ++ L H AV + FS G +++ S D
Sbjct: 285 CLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN--GL---MVTCSKD 339
Query: 352 GTCRIWD 358
+ +WD
Sbjct: 340 RSIAVWD 346
Score = 88 (36.0 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 22/80 (27%), Positives = 39/80 (48%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN++ D++++++A D I VW+ + V +L GH L + R+ +S
Sbjct: 366 VNVV--DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ---YRDRLVVSGS 420
Query: 603 YDGKTIVWDIWEGIPIRIYE 622
D +WDI G +R+ E
Sbjct: 421 SDNTIRLWDIECGACLRVLE 440
Score = 83 (34.3 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
RG+ + + +R V++ D I +W+ G+ + L GH E V + N RI +S
Sbjct: 404 RGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRI-VS 458
Query: 601 AGYDGKTIVWDI 612
YDGK VWD+
Sbjct: 459 GAYDGKIKVWDL 470
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 146 (56.5 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 39/133 (29%), Positives = 62/133 (46%)
Query: 236 IKRVR-GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
++RV GHR AV FD +Y+++ S DR +K+WS T + + GH+ I
Sbjct: 355 LRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIA--CLQ 410
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D IR+W + G + VL GH V I F + +++S + DG
Sbjct: 411 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK-----RIVSGAYDGKI 465
Query: 355 RIWDARYSQFSPR 367
++WD + + PR
Sbjct: 466 KVWDLQ-AALDPR 477
Score = 125 (49.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 36/135 (26%), Positives = 59/135 (43%)
Query: 233 MQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
++ +K + GH +V C +D R ++TGS D V++W + T L + H +
Sbjct: 270 LECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR 327
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPIS---VLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D I VW + I+ VL GH AAV + F + Y ++S+S
Sbjct: 328 FSNGLMVTCSK--DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK----Y-IVSAS 380
Query: 350 DDGTCRIWDARYSQF 364
D T ++W +F
Sbjct: 381 GDRTIKVWSTSTCEF 395
Score = 109 (43.4 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 33/127 (25%), Positives = 54/127 (42%)
Query: 235 NIKRVR---GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDX 291
N++R++ + VYC +D +I+G D +KIW + CL GH G +
Sbjct: 229 NLQRIQCRSENSKGVYCLQYD--DEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVL-- 284
Query: 292 XXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDD 351
D +RVW + G ++ L H AV + FS G +++ S D
Sbjct: 285 CLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN--GL---MVTCSKD 339
Query: 352 GTCRIWD 358
+ +WD
Sbjct: 340 RSIAVWD 346
Score = 88 (36.0 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 22/80 (27%), Positives = 39/80 (48%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN++ D++++++A D I VW+ + V +L GH L + R+ +S
Sbjct: 366 VNVV--DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ---YRDRLVVSGS 420
Query: 603 YDGKTIVWDIWEGIPIRIYE 622
D +WDI G +R+ E
Sbjct: 421 SDNTIRLWDIECGACLRVLE 440
Score = 83 (34.3 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
RG+ + + +R V++ D I +W+ G+ + L GH E V + N RI +S
Sbjct: 404 RGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRI-VS 458
Query: 601 AGYDGKTIVWDI 612
YDGK VWD+
Sbjct: 459 GAYDGKIKVWDL 470
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 146 (56.5 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 39/133 (29%), Positives = 62/133 (46%)
Query: 236 IKRVR-GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
++RV GHR AV FD +Y+++ S DR +K+WS T + + GH+ I
Sbjct: 355 LRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIA--CLQ 410
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D IR+W + G + VL GH V I F + +++S + DG
Sbjct: 411 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK-----RIVSGAYDGKI 465
Query: 355 RIWDARYSQFSPR 367
++WD + + PR
Sbjct: 466 KVWDLQ-AALDPR 477
Score = 125 (49.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 36/135 (26%), Positives = 59/135 (43%)
Query: 233 MQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
++ +K + GH +V C +D R ++TGS D V++W + T L + H +
Sbjct: 270 LECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR 327
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPIS---VLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D I VW + I+ VL GH AAV + F + Y ++S+S
Sbjct: 328 FSNGLMVTCSK--DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDK----Y-IVSAS 380
Query: 350 DDGTCRIWDARYSQF 364
D T ++W +F
Sbjct: 381 GDRTIKVWSTSTCEF 395
Score = 109 (43.4 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 33/127 (25%), Positives = 54/127 (42%)
Query: 235 NIKRVR---GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDX 291
N++R++ + VYC +D +I+G D +KIW + CL GH G +
Sbjct: 229 NLQRIQCRSENSKGVYCLQYDDDK--IISGLRDNSIKIWDKSSLECLKVLTGHTGSVL-- 284
Query: 292 XXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDD 351
D +RVW + G ++ L H AV + FS G +++ S D
Sbjct: 285 CLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN--GL---MVTCSKD 339
Query: 352 GTCRIWD 358
+ +WD
Sbjct: 340 RSIAVWD 346
Score = 88 (36.0 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 22/80 (27%), Positives = 39/80 (48%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN++ D++++++A D I VW+ + V +L GH L + R+ +S
Sbjct: 366 VNVV--DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ---YRDRLVVSGS 420
Query: 603 YDGKTIVWDIWEGIPIRIYE 622
D +WDI G +R+ E
Sbjct: 421 SDNTIRLWDIECGACLRVLE 440
Score = 83 (34.3 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
RG+ + + +R V++ D I +W+ G+ + L GH E V + N RI +S
Sbjct: 404 RGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRI-VS 458
Query: 601 AGYDGKTIVWDI 612
YDGK VWD+
Sbjct: 459 GAYDGKIKVWDL 470
>TAIR|locus:2050064 [details] [associations]
symbol:AT2G21390 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0006886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC006841 GO:GO:0030126 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 ProtClustDB:CLSN2914500
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AK228692 IPI:IPI00534598
PIR:F84600 RefSeq:NP_179734.1 UniGene:At.28070
ProteinModelPortal:Q9SJT9 SMR:Q9SJT9 STRING:Q9SJT9 PaxDb:Q9SJT9
PRIDE:Q9SJT9 EnsemblPlants:AT2G21390.1 GeneID:816678
KEGG:ath:AT2G21390 GeneFarm:3755 TAIR:At2g21390 InParanoid:Q9SJT9
OMA:GMENTDI PhylomeDB:Q9SJT9 Genevestigator:Q9SJT9 Uniprot:Q9SJT9
Length = 1218
Score = 167 (63.8 bits), Expect = 3.0e-07, Sum P(3) = 3.0e-07
Identities = 63/253 (24%), Positives = 98/253 (38%)
Query: 206 GFTRHHRAPSIRAACYAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDR 265
G + H + P I A+ ++ + I R H V F S ++G DD
Sbjct: 14 GLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDY 73
Query: 266 LVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRG 325
+K+W+ +T CL + GH I D IR+W ISVL G
Sbjct: 74 KIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTG 133
Query: 326 HTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA---RYSQFSPRIYIPR----PSDAVA 378
H V +F P+ V +S+S D T R+WD + SP + R SD
Sbjct: 134 HNHYVMCASFHPKEDLV---VSASLDQTVRVWDIGALKKKSASPADDLMRFSQMNSDLFG 190
Query: 379 GRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDV 438
G + + +F+ + V+G+ D ++W ++ E+D
Sbjct: 191 GVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRM-------NETKAWEVDT 243
Query: 439 LSGHENDVNYVQF 451
L GH N+V+ V F
Sbjct: 244 LRGHMNNVSSVMF 256
Score = 55 (24.4 bits), Expect = 3.0e-07, Sum P(3) = 3.0e-07
Identities = 16/71 (22%), Positives = 35/71 (49%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHP-FNPRIAMSA 601
V+ +++ +++ D I VW+A + + + + ++L VHP N ++A
Sbjct: 251 VSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHPEIN---LLAA 307
Query: 602 GYDGKTIVWDI 612
G+D IV+ +
Sbjct: 308 GHDNGMIVFKL 318
Score = 43 (20.2 bits), Expect = 3.0e-07, Sum P(3) = 3.0e-07
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 926 IESEESGRSLLNEQRKHSKGKGISLDDSEDVTKLDTPESHVNA 968
IE+ G E+ G G+ LD + LDTP++ NA
Sbjct: 858 IEAILDGAEAGEEEDDEEGGWGLDLDLPPE---LDTPKASANA 897
Score = 39 (18.8 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 1569 KNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPTETHLHSPW 1618
+ E DE+G W G L + P+ + P + + + T P + W
Sbjct: 869 EEEDDEEGGW--GLDLDLPPEL-DTPKASANARSSTFVTPPQGMPVSQIW 915
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 155 (59.6 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 43/147 (29%), Positives = 60/147 (40%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+ GH V + SGR++ T DR ++W +E + GH + D
Sbjct: 318 IEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS 377
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D RVW L G I L GH + I FSP G Y + + S D TC++WD
Sbjct: 378 LAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPN-G--YHIATGSGDNTCKVWD 434
Query: 359 ARYSQFSPRIY-IPRPSDAVAGRNMAP 384
R + +Y IP + V G P
Sbjct: 435 LRQRRC---VYTIPAHQNLVTGVKFEP 458
Score = 132 (51.5 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 36/150 (24%), Positives = 55/150 (36%)
Query: 208 TRHHRAPSIRAACYAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLV 267
T H + CY + ++ + I GH VY F + G TG D
Sbjct: 329 TWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFG 388
Query: 268 KIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHT 327
++W + T C+ GH +I D +VW L + + H
Sbjct: 389 RVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 448
Query: 328 AAVTAIAFSPRPGSVYQLLSSSDDGTCRIW 357
VT + F P G+ LL+ + D T +IW
Sbjct: 449 NLVTGVKFEPIHGNF--LLTGAYDNTAKIW 476
Score = 51 (23.0 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 15/61 (24%), Positives = 23/61 (37%)
Query: 550 LDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIV 609
+ F+L D +W S + +L GH LD+ IA + YD +
Sbjct: 459 IHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIA-TCSYDRTFKL 517
Query: 610 W 610
W
Sbjct: 518 W 518
Score = 48 (22.0 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 578 LTGHTESTYVLDVHP-FNPRIAMSAGYDGKTIVWDI 612
LTG ++T + HP ++P + AG++GK + DI
Sbjct: 465 LTGAYDNTAKIWTHPGWSP-LKTLAGHEGKVMGLDI 499
Score = 44 (20.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 403 NGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDV 446
+G +TG+ D A++W T P + L+GHE V
Sbjct: 460 HGNFLLTGAYDNTAKIW------THPGWSP---LKTLAGHEGKV 494
>UNIPROTKB|F1Q410 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000010576 Uniprot:F1Q410
Length = 1258
Score = 138 (53.6 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 41/187 (21%), Positives = 78/187 (41%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT--DX 291
+ + ++ H + V C F R++ T S D+ VKIW+ T + H +
Sbjct: 656 EKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHF 715
Query: 292 XXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSS-SD 350
DC +++W L + + GHT +V FSP +LL+S S
Sbjct: 716 TNNSHYLLLATASSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDD----KLLASCSA 771
Query: 351 DGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIF--CCAFNANGTVFV 408
DGT ++WD + + I + + +S + ++ CC+++A+GT +
Sbjct: 772 DGTLKLWDVKSANERKSINV---------KQFFLNSEEPQEDMEVIVKCCSWSADGTRIM 822
Query: 409 TGSSDTL 415
+ + +
Sbjct: 823 VAAKNKI 829
Score = 73 (30.8 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 395 IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDV 446
+ C F+ +G+ F+T S D R+W K + + EIDV+ EN+V
Sbjct: 893 VHCVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSAIVLKQEIDVVF-QENEV 943
Score = 57 (25.1 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 26/110 (23%), Positives = 50/110 (45%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKT 607
+S N + A+ C + +WN V GH + + P S+ D +T
Sbjct: 856 FSPQNHLAVVALSQCCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSS--DDQT 913
Query: 608 I-VWD---IWEGIPIRI-YEISR-FRDGASIILS-DDVGQLYILN--TGQ 648
I +W+ + + I + EI F++ ++L+ D++ +L ++N TGQ
Sbjct: 914 IRLWETKKVCKNSAIVLKQEIDVVFQENEVMVLAVDNIKRLQLINGKTGQ 963
Score = 55 (24.4 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 27/117 (23%), Positives = 48/117 (41%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLT-------GHTESTYVLDVHPFNP 595
V V+S+D+ + + I +WN ++G L+H T +V D+ F+P
Sbjct: 1139 VRCSVFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPILVEEGAATHGGWVTDLC-FSP 1197
Query: 596 RIAMSAGYDGKTIVWDIWEGIPIRIY--------EISRFRDGASIILSDDVGQLYIL 644
M G W++ G + + +I D + + D++G LYIL
Sbjct: 1198 DSKMLVSAGGYLKWWNVVTGESSQTFYTNGTCLKKIHVSSDFKTYVTVDNLGILYIL 1254
Score = 53 (23.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 397 CCAFNANGTVFVTGSSDTLARVWN 420
C F+ + T+ TG + R+WN
Sbjct: 1141 CSVFSVDSTLLATGDDNGEIRIWN 1164
Score = 50 (22.7 bits), Expect = 6.2e-05, Sum P(3) = 6.2e-05
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 393 HQ--IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQ 450
HQ + C + + T F + S+D A++W+ + P HE L GH+ V
Sbjct: 1093 HQDTVLSCDISPDATKFSSTSADKTAKIWSF------ELLSPLHE---LRGHKGCVRCSV 1143
Query: 451 FS 452
FS
Sbjct: 1144 FS 1145
Score = 48 (22.0 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 19/93 (20%), Positives = 32/93 (34%)
Query: 566 VWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIR------ 619
+W+ G + H ++ D+ P + + S D +W P+
Sbjct: 1078 IWSIITGRIEKDFVCHQDTVLSCDISPDATKFS-STSADKTAKIWSFELLSPLHELRGHK 1136
Query: 620 -IYEISRFR-DGASIILSDDVGQLYILNTGQGE 650
S F D + DD G++ I N GE
Sbjct: 1137 GCVRCSVFSVDSTLLATGDDNGEIRIWNVSNGE 1169
Score = 48 (22.0 bits), Expect = 6.2e-06, Sum P(4) = 6.2e-06
Identities = 21/75 (28%), Positives = 33/75 (44%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V I ++ D + ++++ D I VWN V L H E+ V D +S
Sbjct: 1014 VRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYVF-LQAHQET--VKDFKLLKNSKLLSWS 1070
Query: 603 YDGKTI--VWDIWEG 615
+DG T+ +W I G
Sbjct: 1071 FDG-TVKKIWSIITG 1084
Score = 44 (20.5 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 400 FNANGTVFVTGSSDTLARVWN 420
F +G ++ S D+ +VWN
Sbjct: 1019 FTDDGKTLISSSDDSSIQVWN 1039
Score = 40 (19.1 bits), Expect = 6.2e-06, Sum P(4) = 6.2e-06
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 948 ISLDDSEDVTKLDTPESHVNAGIRRLVLKLPVRDSNKHE 986
+S D S D TK + + A I L P+ + H+
Sbjct: 1098 LSCDISPDATKFSSTSADKTAKIWSFELLSPLHELRGHK 1136
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 152 (58.6 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 36/124 (29%), Positives = 54/124 (43%)
Query: 236 IKRVRGHRNAVYCAI-FDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
++ + GH+ A C++ F G +V +GS D +K+W + C+ RGH +
Sbjct: 98 LRTLMGHK-ANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D +++W L G +S GHT V + F P Y L S S D T
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE---YLLASGSSDRTI 213
Query: 355 RIWD 358
R WD
Sbjct: 214 RFWD 217
Score = 134 (52.2 bits), Expect = 0.00094, Sum P(3) = 0.00094
Identities = 33/129 (25%), Positives = 56/129 (43%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
+ K I + GH + V + ++ GS +++W +E A L + GH+ +I
Sbjct: 50 INKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANIC 109
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D I++W + + RGH+ AV + FSP G L S++
Sbjct: 110 SLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGK--WLASAA 166
Query: 350 DDGTCRIWD 358
DD T ++WD
Sbjct: 167 DDHTVKLWD 175
Score = 133 (51.9 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 34/126 (26%), Positives = 52/126 (41%)
Query: 236 IKRVRGHRNAVYCAIFDR-SGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
++ + H + V + + SGR + TG DD V +WS+ C+ S GH +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
IRVW L + L GH A + ++ F P G + S S D
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY-GEF--VASGSQDTNI 129
Query: 355 RIWDAR 360
++WD R
Sbjct: 130 KLWDIR 135
Score = 83 (34.3 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 19/73 (26%), Positives = 39/73 (53%)
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
+ V + +S D +++ +A D + +W+ G ++ GHT V++ HP N + ++
Sbjct: 148 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP-NEYL-LA 205
Query: 601 AGYDGKTI-VWDI 612
+G +TI WD+
Sbjct: 206 SGSSDRTIRFWDL 218
Score = 51 (23.0 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 15/64 (23%), Positives = 29/64 (45%)
Query: 392 SHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHE--IDVLSGHENDVNYV 449
S + C F+ +G + + D ++W+ S+ P H ++V+ H N+ Y+
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM-SEFPGHTGPVNVVEFHPNE--YL 203
Query: 450 QFSG 453
SG
Sbjct: 204 LASG 207
Score = 47 (21.6 bits), Expect = 0.00094, Sum P(3) = 0.00094
Identities = 14/47 (29%), Positives = 21/47 (44%)
Query: 375 DAVAGRNMAP-SSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
D AG+ M+ GP + F+ N + +GSSD R W+
Sbjct: 175 DLTAGKMMSEFPGHTGP----VNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 40 (19.1 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 1110 PEKDGIDISCGEEITNCGDNTDEVPLKNVKNLSGENNDVYSGDASCKEQQSGFSELN 1166
P G+DIS E + C + K +K++SG V S + S F EL+
Sbjct: 600 PPSVGVDISREERLHKC-----RLCYKQLKSISGL---VKSKSSLSGRHGSAFRELH 648
>GENEDB_PFALCIPARUM|PFC0100c [details] [associations]
symbol:PFC0100c "regulatory protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 141 (54.7 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 35/122 (28%), Positives = 50/122 (40%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+ GH V C D S + TGS+DRL+KIW + + + GH I D
Sbjct: 282 ILGHSGWVNCVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDIKISKKNP 341
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D ++ W L I GH + V ++ P S+ L+S D R+WD
Sbjct: 342 YLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHP---SLDLLMSGGRDAVVRVWD 398
Query: 359 AR 360
R
Sbjct: 399 IR 400
Score = 126 (49.4 bits), Expect = 0.00062, P = 0.00062
Identities = 42/175 (24%), Positives = 70/175 (40%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH N++ + Y+ + +D VK W +E + GH +
Sbjct: 326 GHINSIRDIKISKKNPYLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLL 385
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAF-SPRPGSVYQLLSSSDDGTCRIWDA 359
D ++RVW + + VL GHT V +I S P Q++S S D R+WD
Sbjct: 386 MSGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQSVEP----QVVSGSQDKMIRLWDL 441
Query: 360 RYSQFSPRIYIPRPSDAVAGRNMAPSS----SAGPQSHQIFCCA---FNANGTVF 407
+ RI + ++ ++ P S G + +++C A F+ N T F
Sbjct: 442 NNGKC--RISLTHHKKSIRSLSIHPFEYSFCSCGTDNVKVWCGADAEFDRNITGF 494
Score = 67 (28.6 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVW 610
V++ D I +W+ +G SLT H +S L +HPF S G D VW
Sbjct: 427 VVSGSQDKMIRLWDLNNGKCRISLTHHKKSIRSLSIHPFEYSFC-SCGTDNVK-VW 480
Score = 53 (23.7 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 38/153 (24%), Positives = 58/153 (37%)
Query: 1085 DANNGS-GIHLDDDKEKESEVNGHVKPEKDGIDISCGEEITN--CGDNTDE----VPLKN 1137
D NNG I L K+ ++ H P + SCG + CG + + +
Sbjct: 440 DLNNGKCRISLTHHKKSIRSLSIH--PFEYSF-CSCGTDNVKVWCGADAEFDRNITGFNS 496
Query: 1138 VKNLSGENNDVYSGDASCKEQQSGFSELNYYDESKCV--NTTDEDTTPYPNHLQNGTIQ- 1194
+ N S D Y D+S S +L++YD S +T P +N T+
Sbjct: 497 IINCSLIKQDPYFNDSSILILGSNNGQLHFYDWSSGYKYDTLSNKVVPGTVECENSTLSM 556
Query: 1195 ---PSELKEILTPVSTKLRIRSKRILRDADVEN 1224
SE + I T ++I + DA EN
Sbjct: 557 AFDKSESRLITTHGDKSIKIWKEN--EDATPEN 587
Score = 39 (18.8 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 408 VTGSSDTLARVWN 420
V+GS D + R+W+
Sbjct: 428 VSGSQDKMIRLWD 440
>UNIPROTKB|O97334 [details] [associations]
symbol:PFC0100c "Regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 141 (54.7 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 35/122 (28%), Positives = 50/122 (40%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+ GH V C D S + TGS+DRL+KIW + + + GH I D
Sbjct: 282 ILGHSGWVNCVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDIKISKKNP 341
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D ++ W L I GH + V ++ P S+ L+S D R+WD
Sbjct: 342 YLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHP---SLDLLMSGGRDAVVRVWD 398
Query: 359 AR 360
R
Sbjct: 399 IR 400
Score = 126 (49.4 bits), Expect = 0.00062, P = 0.00062
Identities = 42/175 (24%), Positives = 70/175 (40%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GH N++ + Y+ + +D VK W +E + GH +
Sbjct: 326 GHINSIRDIKISKKNPYLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLL 385
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAF-SPRPGSVYQLLSSSDDGTCRIWDA 359
D ++RVW + + VL GHT V +I S P Q++S S D R+WD
Sbjct: 386 MSGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQSVEP----QVVSGSQDKMIRLWDL 441
Query: 360 RYSQFSPRIYIPRPSDAVAGRNMAPSS----SAGPQSHQIFCCA---FNANGTVF 407
+ RI + ++ ++ P S G + +++C A F+ N T F
Sbjct: 442 NNGKC--RISLTHHKKSIRSLSIHPFEYSFCSCGTDNVKVWCGADAEFDRNITGF 494
Score = 67 (28.6 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVW 610
V++ D I +W+ +G SLT H +S L +HPF S G D VW
Sbjct: 427 VVSGSQDKMIRLWDLNNGKCRISLTHHKKSIRSLSIHPFEYSFC-SCGTDNVK-VW 480
Score = 53 (23.7 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 38/153 (24%), Positives = 58/153 (37%)
Query: 1085 DANNGS-GIHLDDDKEKESEVNGHVKPEKDGIDISCGEEITN--CGDNTDE----VPLKN 1137
D NNG I L K+ ++ H P + SCG + CG + + +
Sbjct: 440 DLNNGKCRISLTHHKKSIRSLSIH--PFEYSF-CSCGTDNVKVWCGADAEFDRNITGFNS 496
Query: 1138 VKNLSGENNDVYSGDASCKEQQSGFSELNYYDESKCV--NTTDEDTTPYPNHLQNGTIQ- 1194
+ N S D Y D+S S +L++YD S +T P +N T+
Sbjct: 497 IINCSLIKQDPYFNDSSILILGSNNGQLHFYDWSSGYKYDTLSNKVVPGTVECENSTLSM 556
Query: 1195 ---PSELKEILTPVSTKLRIRSKRILRDADVEN 1224
SE + I T ++I + DA EN
Sbjct: 557 AFDKSESRLITTHGDKSIKIWKEN--EDATPEN 587
Score = 39 (18.8 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 408 VTGSSDTLARVWN 420
V+GS D + R+W+
Sbjct: 428 VSGSQDKMIRLWD 440
>UNIPROTKB|F1NLV4 [details] [associations]
symbol:GNB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001750 "photoreceptor outer segment" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0005834 GeneTree:ENSGT00550000074331
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:AADN02040871
IPI:IPI00596111 Ensembl:ENSGALT00000002040
Ensembl:ENSGALT00000040376 Uniprot:F1NLV4
Length = 403
Score = 150 (57.9 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 33/127 (25%), Positives = 54/127 (42%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ + GH + C F ++T S D +W +ET + GH GD+
Sbjct: 137 RELAGHTGYLSCCRF-LDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
D ++W + +G+ GH + + AI F P G+ + + SDD TCR+
Sbjct: 196 ARCFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPN-GNAFA--TGSDDATCRL 252
Query: 357 WDARYSQ 363
+D R Q
Sbjct: 253 FDLRADQ 259
Score = 52 (23.4 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 399 AFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVN 447
AF+ +G + + G D VW+ K +D+ VL+GH+N V+
Sbjct: 277 AFSKSGRLLLAGYDDFNCNVWDTLK-----ADRAG----VLAGHDNRVS 316
Score = 52 (23.4 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 13/49 (26%), Positives = 18/49 (36%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDV 590
G+ + +S R +LA D VW+ L GH L V
Sbjct: 272 GITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDNRVSCLGV 320
>ZFIN|ZDB-GENE-070112-342 [details] [associations]
symbol:gnb5a "guanine nucleotide binding protein (G
protein), beta 5a" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 ZFIN:ZDB-GENE-070112-342 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE OrthoDB:EOG4XWFXZ EMBL:AL954697 EMBL:BC129375
IPI:IPI00512905 RefSeq:NP_001073650.1 UniGene:Dr.108630 SMR:A1L271
Ensembl:ENSDART00000027720 GeneID:562813 KEGG:dre:562813 CTD:562813
InParanoid:A1L271 NextBio:20884602 Uniprot:A1L271
Length = 355
Score = 130 (50.8 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 32/126 (25%), Positives = 50/126 (39%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
K V H N + F S ++T S D +W +E+ L S GH D+
Sbjct: 149 KSVAMHTNYLSACCFTNSDMQILTSSGDGTCALWDVESGQMLQSFHGHAADVLCLDLAPS 208
Query: 297 XXXXXXXXXDCIIR--VWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
C + VW + G + H + + ++ + P G + S SDD TC
Sbjct: 209 ETGNTFVSGGCDKKACVWDMRTGQCVQSFESHDSDINSVRYYPS-GDAFA--SGSDDATC 265
Query: 355 RIWDAR 360
R++D R
Sbjct: 266 RLYDLR 271
Score = 76 (31.8 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 326 HTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPS 385
HT ++A F+ S Q+L+SS DGTC +WD Q + +D + ++APS
Sbjct: 154 HTNYLSACCFT---NSDMQILTSSGDGTCALWDVESGQMLQSFH-GHAADVLC-LDLAPS 208
Query: 386 SS 387
+
Sbjct: 209 ET 210
Score = 71 (30.1 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 19/69 (27%), Positives = 27/69 (39%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G + + +SL R + D I VW+ G+ V L GH L V P S
Sbjct: 287 GASSVDFSLSGRLLFGGYNDYTINVWDVLKGARVSILFGHENRVSTLRVSPDGTAFC-SG 345
Query: 602 GYDGKTIVW 610
+D +W
Sbjct: 346 SWDHTLRIW 354
Score = 62 (26.9 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 233 MQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMET 274
M+ + ++GH N V C + + R +++ S D V +W T
Sbjct: 55 MKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDAFT 96
Score = 52 (23.4 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 17/57 (29%), Positives = 26/57 (45%)
Query: 404 GTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQF--SGCAVAS 458
G FV+G D A VW+ + + H++D+N V++ SG A AS
Sbjct: 211 GNTFVSGGCDKKACVWDM---------RTGQCVQSFESHDSDINSVRYYPSGDAFAS 258
Score = 50 (22.7 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 17/61 (27%), Positives = 27/61 (44%)
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS--GCAVA 457
F+ +G + G +D VW+ K + +L GHEN V+ ++ S G A
Sbjct: 293 FSLSGRLLFGGYNDYTINVWDVLK---------GARVSILFGHENRVSTLRVSPDGTAFC 343
Query: 458 S 458
S
Sbjct: 344 S 344
Score = 46 (21.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 403 NGTVFVTGSSDTLARVW 419
+GT F +GS D R+W
Sbjct: 338 DGTAFCSGSWDHTLRIW 354
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 128 (50.1 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 35/154 (22%), Positives = 61/154 (39%)
Query: 225 KPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGH 284
KP + +K + + AV F+ G Y +T D+ +K+W+ L + GH
Sbjct: 7 KPRAPELPRKQLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGH 66
Query: 285 EGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQ 344
++ D D + +W + G + RGH V + F+ +V
Sbjct: 67 GYEVLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEE-ATV-- 123
Query: 345 LLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVA 378
+LS S D + R WD R + P + D ++
Sbjct: 124 ILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGIS 157
Score = 98 (39.6 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 34/144 (23%), Positives = 58/144 (40%)
Query: 236 IKRVRGHRNAVYCAI--FDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXX 293
++ GH V A FD S ++ +G D+ V +W + T + RGH G +
Sbjct: 60 LRTYSGHGYEVLDAAGSFDNS--HLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQF 117
Query: 294 XXXXXXXXXXXXDCIIRVW----RLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D +R W R P+ P+ L ++++ S +++L+ S
Sbjct: 118 NEEATVILSGSIDSSVRCWDCRSRKPE--PVQTLDEARDGISSVKVSD-----HEILAGS 170
Query: 350 DDGTCRIWDARYSQFSPRIYIPRP 373
DG R +D R Q + Y+ P
Sbjct: 171 VDGRVRRYDLRMGQVTSD-YVGSP 193
Score = 71 (30.1 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 19/70 (27%), Positives = 32/70 (45%)
Query: 548 WSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLD--VHPFNPRIAMSAGYDG 605
+S D + L + +D + + + G L+ GH Y LD + + + +S DG
Sbjct: 199 FSRDGQCTLISSLDSTLRLLDKDTGELLGEYVGHKNQKYKLDCCLSERDTHV-VSCSEDG 257
Query: 606 KTIVWDIWEG 615
K WD+ EG
Sbjct: 258 KVFFWDLVEG 267
Score = 52 (23.4 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVW 610
V++ D ++ W+ +GSL +L + L HP +P + + G G W
Sbjct: 250 VVSCSEDGKVFFWDLVEGSLALALPVGSNVVQSLAYHPADPCLLTAMG--GSIQYW 303
Score = 45 (20.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 483 NIVTCSRDGSAIIW 496
++V+CS DG W
Sbjct: 249 HVVSCSEDGKVFFW 262
>TAIR|locus:2036823 [details] [associations]
symbol:AT1G62020 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0030244 "cellulose biosynthetic
process" evidence=RCA] [GO:0048193 "Golgi vesicle transport"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 EMBL:AC004392 EMBL:AY050400
EMBL:BT001048 IPI:IPI00528095 PIR:T02146 RefSeq:NP_176393.1
UniGene:At.48329 ProteinModelPortal:Q94A40 SMR:Q94A40 IntAct:Q94A40
STRING:Q94A40 PaxDb:Q94A40 PRIDE:Q94A40 EnsemblPlants:AT1G62020.1
GeneID:842497 KEGG:ath:AT1G62020 GeneFarm:2989 TAIR:At1g62020
HOGENOM:HOG000195913 InParanoid:Q94A40 KO:K05236 OMA:PLAADHI
PhylomeDB:Q94A40 ProtClustDB:CLSN2914500 Genevestigator:Q94A40
InterPro:IPR016391 PIRSF:PIRSF003354 Uniprot:Q94A40
Length = 1216
Score = 169 (64.5 bits), Expect = 3.8e-07, Sum P(3) = 3.8e-07
Identities = 64/253 (25%), Positives = 97/253 (38%)
Query: 206 GFTRHHRAPSIRAACYAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDR 265
G + H + P I A+ ++ + I R H V F S ++G DD
Sbjct: 14 GLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDY 73
Query: 266 LVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRG 325
+K+W+ + CL + GH I D IR+W +SVL G
Sbjct: 74 KIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTG 133
Query: 326 HTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA---RYSQFSPRIYIPR----PSDAVA 378
H V +F P+ V +S+S D T R+WD R SP I R SD
Sbjct: 134 HNHYVMCASFHPKEDLV---VSASLDQTVRVWDIGALRKKTVSPADDIMRLTQMNSDLFG 190
Query: 379 GRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDV 438
G + + AF+ + V+G+ D ++W ++ E+D
Sbjct: 191 GVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRM-------NETKAWEVDT 243
Query: 439 LSGHENDVNYVQF 451
L GH N+V+ V F
Sbjct: 244 LRGHMNNVSSVMF 256
Score = 53 (23.7 bits), Expect = 3.8e-07, Sum P(3) = 3.8e-07
Identities = 16/70 (22%), Positives = 34/70 (48%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V+ +++ +++ D I VW+A + + + + ++L VHP +A AG
Sbjct: 251 VSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHPEMNLLA--AG 308
Query: 603 YDGKTIVWDI 612
+D IV+ +
Sbjct: 309 HDSGMIVFKL 318
Score = 42 (19.8 bits), Expect = 3.8e-07, Sum P(3) = 3.8e-07
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 938 EQRKHSKGKGISLDDSEDVTKLDTPESHVNA 968
E+ +G G L+D +LDTP++ NA
Sbjct: 867 EEENDEEG-GWGLEDLVLPPELDTPKASANA 896
Score = 41 (19.5 bits), Expect = 3.3e-06, Sum P(4) = 3.3e-06
Identities = 12/50 (24%), Positives = 20/50 (40%)
Query: 1569 KNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPTETHLHSPW 1618
+ E+DE+G W G V P + P + + + T P + W
Sbjct: 867 EEENDEEGGW--GLEDLVLPPELDTPKASANARSSVFVTPPQGMPVSQSW 914
Score = 37 (18.1 bits), Expect = 3.3e-06, Sum P(4) = 3.3e-06
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 1456 GDEVVYLRQGHQEYINYSGSRE 1477
GD + Y + Y YS R+
Sbjct: 329 GDSLFYAKDRFLRYYEYSTQRD 350
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 123 (48.4 bits), Expect = 4.0e-07, Sum P(3) = 4.0e-07
Identities = 25/123 (20%), Positives = 53/123 (43%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ + GH + V + G Y ++ S D+ +++W + + + GH D+
Sbjct: 57 RSLEGHSHIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSAD 116
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVL-RGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
D I++W ++ +GHT V+ + FSP P + ++S+ D +
Sbjct: 117 NRQIVSGSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPV-IVSAGWDKLVK 175
Query: 356 IWD 358
+W+
Sbjct: 176 VWE 178
Score = 107 (42.7 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 29/106 (27%), Positives = 48/106 (45%)
Query: 258 VITGSDDRLVKIWSM---ETAYCLA--SCRGHEGDITDXXXXXXXXXXXXXXXDCIIRVW 312
+++GS D+ + IW++ E AY S GH ++D D +R+W
Sbjct: 31 LLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDCVISSDGAYALSASWDKSLRLW 90
Query: 313 RLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
L G GHT V +++FS Q++S S D T ++W+
Sbjct: 91 ELSSGQTTRTFVGHTNDVLSVSFS---ADNRQIVSGSRDRTIKLWN 133
Score = 74 (31.1 bits), Expect = 4.0e-07, Sum P(3) = 4.0e-07
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 552 NRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWD 611
N +++A D + VW A L GHT + + P + + S G DG T++WD
Sbjct: 162 NPVIVSAGWDKLVKVWELASCRLQTDHIGHTGYINTVTISP-DGSLCASGGKDGVTMLWD 220
Query: 612 IWE 614
+ E
Sbjct: 221 LNE 223
Score = 44 (20.5 bits), Expect = 4.0e-07, Sum P(3) = 4.0e-07
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 1050 DYLNLSNGYKDGKIRWGGVRARS 1072
D L GY D KIR GV +R+
Sbjct: 294 DGQTLFAGYTDNKIRAWGVMSRA 316
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 146 (56.5 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 39/133 (29%), Positives = 62/133 (46%)
Query: 236 IKRVR-GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
++RV GHR AV FD +Y+++ S DR +K+WS T + + GH+ I
Sbjct: 328 LRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIA--CLQ 383
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D IR+W + G + VL GH V I F + +++S + DG
Sbjct: 384 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK-----RIVSGAYDGKI 438
Query: 355 RIWDARYSQFSPR 367
++WD + + PR
Sbjct: 439 KVWDLQ-AALDPR 450
Score = 123 (48.4 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 36/135 (26%), Positives = 59/135 (43%)
Query: 233 MQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXX 292
++ +K + GH +V C +D R ++TGS D V++W + T L + H +
Sbjct: 243 LECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR 300
Query: 293 XXXXXXXXXXXXXDCIIRVWRLPDGLPIS---VLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D I VW + I+ VL GH AAV + F + Y ++S+S
Sbjct: 301 FSNGLMVTCSK--DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK----Y-IVSAS 353
Query: 350 DDGTCRIWDARYSQF 364
D T ++W +F
Sbjct: 354 GDRTIKVWSTSTCEF 368
Score = 109 (43.4 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 33/127 (25%), Positives = 54/127 (42%)
Query: 235 NIKRVR---GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDX 291
N++R++ + VYC +D +I+G D +KIW + CL GH G +
Sbjct: 202 NLQRIQCRSENSKGVYCLQYD--DEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVL-- 257
Query: 292 XXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDD 351
D +RVW + G ++ L H AV + FS G +++ S D
Sbjct: 258 CLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSN--GL---MVTCSKD 312
Query: 352 GTCRIWD 358
+ +WD
Sbjct: 313 RSIAVWD 319
Score = 88 (36.0 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 22/80 (27%), Positives = 39/80 (48%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN++ D++++++A D I VW+ + V +L GH L + R+ +S
Sbjct: 339 VNVV--DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ---YRDRLVVSGS 393
Query: 603 YDGKTIVWDIWEGIPIRIYE 622
D +WDI G +R+ E
Sbjct: 394 SDNTIRLWDIECGACLRVLE 413
Score = 83 (34.3 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
RG+ + + +R V++ D I +W+ G+ + L GH E V + N RI +S
Sbjct: 377 RGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRI-VS 431
Query: 601 AGYDGKTIVWDI 612
YDGK VWD+
Sbjct: 432 GAYDGKIKVWDL 443
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 135 (52.6 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 33/122 (27%), Positives = 50/122 (40%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXX 298
+ GH V C + ++ +TGS DR +KIW + + S GH +
Sbjct: 200 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 259
Query: 299 XXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
D ++ W L I GH +AV + P ++ L++ S D T RIWD
Sbjct: 260 YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHP---TIDVLVTCSRDSTARIWD 316
Query: 359 AR 360
R
Sbjct: 317 VR 318
Score = 130 (50.8 bits), Expect = 0.00018, P = 0.00018
Identities = 35/140 (25%), Positives = 59/140 (42%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
V+ ++ + GH NAV + +ITGS D +++W + + H+ +
Sbjct: 317 VRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVR 376
Query: 290 DXXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D I + W+ PDG I L GH A + +A + G L+S +
Sbjct: 377 AVVLHPLHYTFASGSPDNI-KQWKFPDGGFIQNLSGHNAIINTLAVNT-DGV---LVSGA 431
Query: 350 DDGTCRIWDARYSQFSPRIY 369
D+GT +WD R R++
Sbjct: 432 DNGTMHLWDWRTGYNFQRVH 451
Score = 70 (29.7 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 30/144 (20%), Positives = 51/144 (35%)
Query: 482 DNIVTCSRDGSAIIWIPRSRRS-HPKAARWTQAYHLKVXXXXXXXXXXXXXXXXXILPTP 540
D +VTCSRD +A IW R++ S H + ++ +
Sbjct: 301 DVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLV 360
Query: 541 RGVNMIVWSLDNRFVLAAIMDC-----------RICVWNAADGSLVHSLTGHTESTYVLD 589
G + + + V A ++ I W DG + +L+GH L
Sbjct: 361 AGKTRVTLTNHKKSVRAVVLHPLHYTFASGSPDNIKQWKFPDGGFIQNLSGHNAIINTLA 420
Query: 590 VHPFNPRIAMSAGYDGKTIVWDIW 613
V+ + +S +G +WD W
Sbjct: 421 VN--TDGVLVSGADNGTMHLWD-W 441
Score = 48 (22.0 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 408 VTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSG 453
+TGS DT R+W+ T + NH+ V + + ++Y SG
Sbjct: 346 ITGSHDTTIRLWDLVAGKTRVT-LTNHKKSVRAVVLHPLHYTFASG 390
Score = 40 (19.1 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 1482 ITVKGNIRAVEFCKVESLEYATASGSGDS 1510
+T+ + ++V + L Y ASGS D+
Sbjct: 366 VTLTNHKKSVRAVVLHPLHYTFASGSPDN 394
>UNIPROTKB|O76071 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IGI] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0097361 "CIA complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HOGENOM:HOG000208901
OMA:SWKCVCT CTD:9391 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:U63810 EMBL:EF011618 EMBL:AC004020 EMBL:CR456802
EMBL:AK223257 EMBL:BC001395 EMBL:BC032812 IPI:IPI00008791
RefSeq:NP_004795.1 UniGene:Hs.12109 PDB:3FM0 PDBsum:3FM0
ProteinModelPortal:O76071 SMR:O76071 IntAct:O76071
MINT:MINT-1416717 STRING:O76071 PhosphoSite:O76071 PaxDb:O76071
PeptideAtlas:O76071 PRIDE:O76071 DNASU:9391 Ensembl:ENST00000488633
GeneID:9391 KEGG:hsa:9391 UCSC:uc002svs.3 GeneCards:GC02P096931
HGNC:HGNC:14280 HPA:HPA017882 MIM:604333 neXtProt:NX_O76071
PharmGKB:PA162382269 InParanoid:O76071 PhylomeDB:O76071
ChiTaRS:CIAO1 EvolutionaryTrace:O76071 GenomeRNAi:9391
NextBio:35187 Bgee:O76071 CleanEx:HS_CIAO1 Genevestigator:O76071
GermOnline:ENSG00000144021 Uniprot:O76071
Length = 339
Score = 153 (58.9 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 61/229 (26%), Positives = 92/229 (40%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSM--ETAY-CLASCRGHEGDITDXX 292
+ + GH N V + SG + T S D+ V +W + E Y C++ H D+
Sbjct: 98 VTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVV 157
Query: 293 XXXXXXXXXXXXXDCIIRVWRLP--DGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSD 350
D ++++R D + + L GH + V ++AF P S +L S SD
Sbjct: 158 WHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDP---SGQRLASCSD 214
Query: 351 DGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPS-----SSAGPQSHQIFCCAFNANGT 405
D T RIW R Y+P VA PS + +G S I+ A+
Sbjct: 215 DRTVRIW---------RQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTG 265
Query: 406 VFVTGSSDTLARVWNACKPNTDDSDQPNHEID--VLSGHENDVNYVQFS 452
T D RV+ PN+D QP + + H DVN V ++
Sbjct: 266 ALATACGDDAIRVFQE-DPNSDPQ-QPTFSLTAHLHQAHSQDVNCVAWN 312
Score = 44 (20.5 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 577 SLTGHTESTYVLDVH-----PFNPRIAMSAGYDGKTIVW 610
SLT H + DV+ P P + S DG+ W
Sbjct: 293 SLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFW 331
>UNIPROTKB|P49027 [details] [associations]
symbol:RACK1A "Guanine nucleotide-binding protein subunit
beta-like protein A" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0050832 "defense response to fungus" evidence=IMP] [GO:0060267
"positive regulation of respiratory burst" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005737 GO:GO:0009507 GO:GO:0046686
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0050832 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048364 GO:GO:0004871 GO:GO:0048367
GO:GO:0022626 EMBL:AP008207 EMBL:CM000138 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM ProtClustDB:CLSN2682135 EMBL:D38231
EMBL:AP003452 EMBL:AK060428 EMBL:AK098893 EMBL:AK121587 PIR:T03764
RefSeq:NP_001043910.1 UniGene:Os.4684 ProteinModelPortal:P49027
SMR:P49027 STRING:P49027 PRIDE:P49027
EnsemblPlants:LOC_Os01g49290.1 GeneID:4324115
KEGG:dosa:Os01t0686800-02 KEGG:osa:4324115 Gramene:P49027
GO:GO:0060267 Uniprot:P49027
Length = 334
Score = 112 (44.5 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 30/130 (23%), Positives = 57/130 (43%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+R+ GH + V + G++ ++GS D +++W + T GH+ D+
Sbjct: 69 RRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVD 128
Query: 297 XXXXXXXXXDCIIRVWR-LPD-----GLPISVLRGHTAAVTAIAFSPRPGSVYQ--LLSS 348
D I++W L + G + GH V+ + FSP + +Q ++S
Sbjct: 129 NRQIVSASRDRTIKLWNTLGECKYTIGGDLGGGEGHNGWVSCVRFSP---NTFQPTIVSG 185
Query: 349 SDDGTCRIWD 358
S D T ++W+
Sbjct: 186 SWDRTVKVWN 195
Score = 88 (36.0 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 26/81 (32%), Positives = 40/81 (49%)
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWE 614
+++ D + VWN + L +L GH + V P + + S G DG T++WD+ E
Sbjct: 182 IVSGSWDRTVKVWNLTNCKLRCNLEGHGGYVNAVAVSP-DGSLCASGGKDGVTLLWDLAE 240
Query: 615 GIPIRIYEISRFRDGASIILS 635
G R+Y + D SII S
Sbjct: 241 GK--RLYSL----DAGSIIHS 255
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 152 (58.6 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 36/124 (29%), Positives = 54/124 (43%)
Query: 236 IKRVRGHRNAVYCAI-FDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
++ + GH+ A C++ F G +V +GS D +K+W + C+ RGH +
Sbjct: 98 LRTLMGHK-ANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
D +++W L G +S GHT V + F P Y L S S D T
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE---YLLASGSSDRTI 213
Query: 355 RIWD 358
R WD
Sbjct: 214 RFWD 217
Score = 133 (51.9 bits), Expect = 5.0e-07, Sum P(4) = 5.0e-07
Identities = 34/126 (26%), Positives = 52/126 (41%)
Query: 236 IKRVRGHRNAVYCAIFDR-SGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXX 294
++ + H + V + + SGR + TG DD V +WS+ C+ S GH +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 295 XXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
IRVW L + L GH A + ++ F P G + S S D
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY-GEF--VASGSQDTNI 129
Query: 355 RIWDAR 360
++WD R
Sbjct: 130 KLWDIR 135
Score = 83 (34.3 bits), Expect = 5.0e-07, Sum P(4) = 5.0e-07
Identities = 19/73 (26%), Positives = 39/73 (53%)
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
+ V + +S D +++ +A D + +W+ G ++ GHT V++ HP N + ++
Sbjct: 148 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP-NEYL-LA 205
Query: 601 AGYDGKTI-VWDI 612
+G +TI WD+
Sbjct: 206 SGSSDRTIRFWDL 218
Score = 51 (23.0 bits), Expect = 0.00059, Sum P(4) = 0.00059
Identities = 15/64 (23%), Positives = 29/64 (45%)
Query: 392 SHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHE--IDVLSGHENDVNYV 449
S + C F+ +G + + D ++W+ S+ P H ++V+ H N+ Y+
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM-SEFPGHTGPVNVVEFHPNE--YL 203
Query: 450 QFSG 453
SG
Sbjct: 204 LASG 207
Score = 41 (19.5 bits), Expect = 5.0e-07, Sum P(4) = 5.0e-07
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 928 SEESGRSLLNEQRKHSKGKGISLDDSEDVTKLDTPESHVN 967
SE RS +E K + + ++ED ++ P++ ++
Sbjct: 354 SESERRSPSSEDDKDERESRAEIQNAEDYNEIFQPKNSIS 393
Score = 40 (19.1 bits), Expect = 5.0e-07, Sum P(4) = 5.0e-07
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 1110 PEKDGIDISCGEEITNCGDNTDEVPLKNVKNLSG 1143
P G+DIS E + C + K +K++SG
Sbjct: 600 PPSVGVDISREERLHKC-----RLCFKQLKSISG 628
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 141 (54.7 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 41/187 (21%), Positives = 76/187 (40%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ ++GH ++V FD SG+ + + S D +K+W + C+ + GH+ +++
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSS-SDDGTCR 355
D I++W + G + GH V + RP L++S S+D T R
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV----RPNQDGTLIASCSNDQTVR 259
Query: 356 IWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNAN--GTVFVTGSSD 413
+W + + V + AP SS S + G ++GS D
Sbjct: 260 VWVVATKECKAELR--EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317
Query: 414 TLARVWN 420
++W+
Sbjct: 318 KTIKMWD 324
Score = 130 (50.8 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 30/120 (25%), Positives = 53/120 (44%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GHR+ V IF +++ S+D +K+W ET + +GH + D
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
D I++W I + GH V+++A P G ++S+S D T ++W+ +
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN-GD--HIVSASRDKTIKMWEVQ 222
Score = 114 (45.2 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 28/119 (23%), Positives = 53/119 (44%)
Query: 231 QKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
Q + I+ + GH + V +G ++++ S D+ +K+W ++T YC+ + GH +
Sbjct: 180 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 239
Query: 291 XXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D +RVW + + LR H V I+++P S Y +S +
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEA 296
Score = 60 (26.2 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 15/69 (21%), Positives = 30/69 (43%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V +++ +F+L+ D + VW+ + + +L H LD H P + ++
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV-VTGS 399
Query: 603 YDGKTIVWD 611
D VW+
Sbjct: 400 VDQTVKVWE 408
Score = 57 (25.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 554 FVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI-VWD 611
F+L+ D I +W+ + G + +L GH + H I A D KT+ VWD
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA--DDKTLRVWD 366
Score = 46 (21.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 11/44 (25%), Positives = 17/44 (38%)
Query: 380 RNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACK 423
+N + H + F+ VTGS D +VW C+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE-CR 410
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 141 (54.7 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 41/187 (21%), Positives = 76/187 (40%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ ++GH ++V FD SG+ + + S D +K+W + C+ + GH+ +++
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSS-SDDGTCR 355
D I++W + G + GH V + RP L++S S+D T R
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV----RPNQDGTLIASCSNDQTVR 259
Query: 356 IWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNAN--GTVFVTGSSD 413
+W + + V + AP SS S + G ++GS D
Sbjct: 260 VWVVATKECKAELR--EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317
Query: 414 TLARVWN 420
++W+
Sbjct: 318 KTIKMWD 324
Score = 130 (50.8 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 30/120 (25%), Positives = 53/120 (44%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GHR+ V IF +++ S+D +K+W ET + +GH + D
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
D I++W I + GH V+++A P G ++S+S D T ++W+ +
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN-GD--HIVSASRDKTIKMWEVQ 222
Score = 114 (45.2 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 28/119 (23%), Positives = 53/119 (44%)
Query: 231 QKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
Q + I+ + GH + V +G ++++ S D+ +K+W ++T YC+ + GH +
Sbjct: 180 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 239
Query: 291 XXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D +RVW + + LR H V I+++P S Y +S +
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEA 296
Score = 60 (26.2 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 15/69 (21%), Positives = 30/69 (43%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V +++ +F+L+ D + VW+ + + +L H LD H P + ++
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV-VTGS 399
Query: 603 YDGKTIVWD 611
D VW+
Sbjct: 400 VDQTVKVWE 408
Score = 57 (25.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 554 FVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI-VWD 611
F+L+ D I +W+ + G + +L GH + H I A D KT+ VWD
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA--DDKTLRVWD 366
Score = 46 (21.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 11/44 (25%), Positives = 17/44 (38%)
Query: 380 RNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACK 423
+N + H + F+ VTGS D +VW C+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE-CR 410
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 141 (54.7 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 41/187 (21%), Positives = 76/187 (40%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ ++GH ++V FD SG+ + + S D +K+W + C+ + GH+ +++
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSS-SDDGTCR 355
D I++W + G + GH V + RP L++S S+D T R
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV----RPNQDGTLIASCSNDQTVR 259
Query: 356 IWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNAN--GTVFVTGSSD 413
+W + + V + AP SS S + G ++GS D
Sbjct: 260 VWVVATKECKAELR--EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317
Query: 414 TLARVWN 420
++W+
Sbjct: 318 KTIKMWD 324
Score = 130 (50.8 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 30/120 (25%), Positives = 53/120 (44%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GHR+ V IF +++ S+D +K+W ET + +GH + D
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
D I++W I + GH V+++A P G ++S+S D T ++W+ +
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN-GD--HIVSASRDKTIKMWEVQ 222
Score = 114 (45.2 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 28/119 (23%), Positives = 53/119 (44%)
Query: 231 QKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
Q + I+ + GH + V +G ++++ S D+ +K+W ++T YC+ + GH +
Sbjct: 180 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 239
Query: 291 XXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D +RVW + + LR H V I+++P S Y +S +
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEA 296
Score = 60 (26.2 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 15/69 (21%), Positives = 30/69 (43%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V +++ +F+L+ D + VW+ + + +L H LD H P + ++
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV-VTGS 399
Query: 603 YDGKTIVWD 611
D VW+
Sbjct: 400 VDQTVKVWE 408
Score = 57 (25.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 554 FVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI-VWD 611
F+L+ D I +W+ + G + +L GH + H I A D KT+ VWD
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA--DDKTLRVWD 366
Score = 46 (21.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 11/44 (25%), Positives = 17/44 (38%)
Query: 380 RNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACK 423
+N + H + F+ VTGS D +VW C+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE-CR 410
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 141 (54.7 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 41/187 (21%), Positives = 76/187 (40%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ ++GH ++V FD SG+ + + S D +K+W + C+ + GH+ +++
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSS-SDDGTCR 355
D I++W + G + GH V + RP L++S S+D T R
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV----RPNQDGTLIASCSNDQTVR 259
Query: 356 IWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNAN--GTVFVTGSSD 413
+W + + V + AP SS S + G ++GS D
Sbjct: 260 VWVVATKECKAELR--EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317
Query: 414 TLARVWN 420
++W+
Sbjct: 318 KTIKMWD 324
Score = 130 (50.8 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 30/120 (25%), Positives = 53/120 (44%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GHR+ V IF +++ S+D +K+W ET + +GH + D
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
D I++W I + GH V+++A P G ++S+S D T ++W+ +
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN-GD--HIVSASRDKTIKMWEVQ 222
Score = 114 (45.2 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 28/119 (23%), Positives = 53/119 (44%)
Query: 231 QKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
Q + I+ + GH + V +G ++++ S D+ +K+W ++T YC+ + GH +
Sbjct: 180 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 239
Query: 291 XXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D +RVW + + LR H V I+++P S Y +S +
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEA 296
Score = 60 (26.2 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 15/69 (21%), Positives = 30/69 (43%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V +++ +F+L+ D + VW+ + + +L H LD H P + ++
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV-VTGS 399
Query: 603 YDGKTIVWD 611
D VW+
Sbjct: 400 VDQTVKVWE 408
Score = 57 (25.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 554 FVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI-VWD 611
F+L+ D I +W+ + G + +L GH + H I A D KT+ VWD
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA--DDKTLRVWD 366
Score = 46 (21.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 11/44 (25%), Positives = 17/44 (38%)
Query: 380 RNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACK 423
+N + H + F+ VTGS D +VW C+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE-CR 410
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 141 (54.7 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 41/187 (21%), Positives = 76/187 (40%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ ++GH ++V FD SG+ + + S D +K+W + C+ + GH+ +++
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSS-SDDGTCR 355
D I++W + G + GH V + RP L++S S+D T R
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV----RPNQDGTLIASCSNDQTVR 259
Query: 356 IWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNAN--GTVFVTGSSD 413
+W + + V + AP SS S + G ++GS D
Sbjct: 260 VWVVATKECKAELR--EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317
Query: 414 TLARVWN 420
++W+
Sbjct: 318 KTIKMWD 324
Score = 130 (50.8 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 30/120 (25%), Positives = 53/120 (44%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GHR+ V IF +++ S+D +K+W ET + +GH + D
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
D I++W I + GH V+++A P G ++S+S D T ++W+ +
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN-GD--HIVSASRDKTIKMWEVQ 222
Score = 114 (45.2 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 28/119 (23%), Positives = 53/119 (44%)
Query: 231 QKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
Q + I+ + GH + V +G ++++ S D+ +K+W ++T YC+ + GH +
Sbjct: 180 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 239
Query: 291 XXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D +RVW + + LR H V I+++P S Y +S +
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEA 296
Score = 60 (26.2 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 15/69 (21%), Positives = 30/69 (43%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V +++ +F+L+ D + VW+ + + +L H LD H P + ++
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV-VTGS 399
Query: 603 YDGKTIVWD 611
D VW+
Sbjct: 400 VDQTVKVWE 408
Score = 57 (25.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 554 FVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI-VWD 611
F+L+ D I +W+ + G + +L GH + H I A D KT+ VWD
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA--DDKTLRVWD 366
Score = 46 (21.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 11/44 (25%), Positives = 17/44 (38%)
Query: 380 RNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACK 423
+N + H + F+ VTGS D +VW C+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE-CR 410
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 141 (54.7 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 41/187 (21%), Positives = 76/187 (40%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ ++GH ++V FD SG+ + + S D +K+W + C+ + GH+ +++
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSS-SDDGTCR 355
D I++W + G + GH V + RP L++S S+D T R
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV----RPNQDGTLIASCSNDQTVR 259
Query: 356 IWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNAN--GTVFVTGSSD 413
+W + + V + AP SS S + G ++GS D
Sbjct: 260 VWVVATKECKAELR--EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317
Query: 414 TLARVWN 420
++W+
Sbjct: 318 KTIKMWD 324
Score = 130 (50.8 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 30/120 (25%), Positives = 53/120 (44%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GHR+ V IF +++ S+D +K+W ET + +GH + D
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
D I++W I + GH V+++A P G ++S+S D T ++W+ +
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN-GD--HIVSASRDKTIKMWEVQ 222
Score = 114 (45.2 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 28/119 (23%), Positives = 53/119 (44%)
Query: 231 QKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
Q + I+ + GH + V +G ++++ S D+ +K+W ++T YC+ + GH +
Sbjct: 180 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 239
Query: 291 XXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D +RVW + + LR H V I+++P S Y +S +
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEA 296
Score = 60 (26.2 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 15/69 (21%), Positives = 30/69 (43%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V +++ +F+L+ D + VW+ + + +L H LD H P + ++
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV-VTGS 399
Query: 603 YDGKTIVWD 611
D VW+
Sbjct: 400 VDQTVKVWE 408
Score = 57 (25.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 554 FVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI-VWD 611
F+L+ D I +W+ + G + +L GH + H I A D KT+ VWD
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA--DDKTLRVWD 366
Score = 46 (21.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 11/44 (25%), Positives = 17/44 (38%)
Query: 380 RNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACK 423
+N + H + F+ VTGS D +VW C+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE-CR 410
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 141 (54.7 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 41/187 (21%), Positives = 76/187 (40%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXX 296
+ ++GH ++V FD SG+ + + S D +K+W + C+ + GH+ +++
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 297 XXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSS-SDDGTCR 355
D I++W + G + GH V + RP L++S S+D T R
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV----RPNQDGTLIASCSNDQTVR 259
Query: 356 IWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNAN--GTVFVTGSSD 413
+W + + V + AP SS S + G ++GS D
Sbjct: 260 VWVVATKECKAELR--EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317
Query: 414 TLARVWN 420
++W+
Sbjct: 318 KTIKMWD 324
Score = 130 (50.8 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 30/120 (25%), Positives = 53/120 (44%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDXXXXXXXXXX 300
GHR+ V IF +++ S+D +K+W ET + +GH + D
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 301 XXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
D I++W I + GH V+++A P G ++S+S D T ++W+ +
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN-GD--HIVSASRDKTIKMWEVQ 222
Score = 114 (45.2 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 28/119 (23%), Positives = 53/119 (44%)
Query: 231 QKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
Q + I+ + GH + V +G ++++ S D+ +K+W ++T YC+ + GH +
Sbjct: 180 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 239
Query: 291 XXXXXXXXXXXXXXXDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D +RVW + + LR H V I+++P S Y +S +
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEA 296
Score = 60 (26.2 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 15/69 (21%), Positives = 30/69 (43%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V +++ +F+L+ D + VW+ + + +L H LD H P + ++
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV-VTGS 399
Query: 603 YDGKTIVWD 611
D VW+
Sbjct: 400 VDQTVKVWE 408
Score = 57 (25.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 554 FVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI-VWD 611
F+L+ D I +W+ + G + +L GH + H I A D KT+ VWD
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA--DDKTLRVWD 366
Score = 46 (21.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 11/44 (25%), Positives = 17/44 (38%)
Query: 380 RNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACK 423
+N + H + F+ VTGS D +VW C+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE-CR 410
WARNING: HSPs involving 312 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.132 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1749 1647 0.00085 125 3 11 22 0.44 34
40 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 562
No. of states in DFA: 638 (68 KB)
Total size of DFA: 759 KB (2322 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 158.90u 0.17s 159.07t Elapsed: 00:00:08
Total cpu time: 159.00u 0.17s 159.17t Elapsed: 00:00:08
Start: Fri May 10 18:05:09 2013 End: Fri May 10 18:05:17 2013
WARNINGS ISSUED: 2