STRING 9.05 
  AT5G49430 protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
AT5G49430
transducin family protein / WD-40 repeat family protein; transducin family protein / WD-40 repeat family protein; FUNCTIONS IN- nucleotide binding; INVOLVED IN- biological_process unknown; LOCATED IN- CUL4 RING ubiquitin ligase complex; EXPRESSED IN- 17 plant structures; EXPRESSED DURING- 6 growth stages; CONTAINS InterPro DOMAIN/s- WD40 repeat-like (InterPro-IPR011046), WD40 repeat, region (InterPro-IPR017986), WD40/YVTN repeat-like (InterPro-IPR015943), WD40 repeat (InterPro-IPR001680), Bromodomain (InterPro-IPR001487); BEST Arabidopsis thaliana protein match is- nucleotide binding ( [...] (1677 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT1G65030
transducin family protein / WD-40 repeat family protein; This gene is predicted to encode a pro [...] (345 aa)
       0.599
AT2G19430
transducin family protein / WD-40 repeat family protein; This gene is predicted to encode a pro [...] (367 aa)
       0.538
AT1G61210
WD-40 repeat family protein / katanin p80 subunit, putative; WD-40 repeat family protein / kata [...] (1180 aa)
      0.536
SPA2
SPA2 (SPA1-RELATED 2); protein binding / signal transducer; Encodes a member of the SPA (suppre [...] (1036 aa)
       0.467
SCD1
SCD1 (STOMATAL CYTOKINESIS-DEFECTIVE 1); protein binding; Encodes soluble protein containing N- [...] (1187 aa)
      0.443
 
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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
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Co-expression Experiments Databases Textmining
 
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