BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000270
(1749 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8WWQ0|PHIP_HUMAN PH-interacting protein OS=Homo sapiens GN=PHIP PE=1 SV=2
Length = 1821
Score = 292 bits (747), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 222/700 (31%), Positives = 322/700 (46%), Gaps = 141/700 (20%)
Query: 51 EVYFLIMHFLSTGPCHRTYGQFWNELLEHQLLPRRYHAWYSRSGLPSGDENDDGMSFPLS 110
E+YFLI FL GPC + E+ E +LLPRR W G P +
Sbjct: 14 ELYFLIARFLEDGPCQQAAQVLIREVAEKELLPRRTD-W-------------TGKEHPRT 59
Query: 111 YNKLVERYPHIEKDHLVKLLKQLIINTSSPSRAMIGGDAPNAA-DVPTLLGRGSFSLLSY 169
Y LV+ Y H+ DHL+++ +L ++ + P + V TLLG G SLL
Sbjct: 60 YQNLVKYYRHLAPDHLLQICHRL--------GPLLEQEIPQSVPGVQTLLGAGRQSLLRT 111
Query: 170 DRDKGQNEIDHPPAHMRWPHMYADQVRGLGLREIGGGF-----TRHHRAPSIRAACYAIA 224
++ H+ W +G L + G + PSI ++
Sbjct: 112 NKS---------CKHVVW--------KGSALAALHCGRPPESPVNYGSPPSIADTLFSRK 154
Query: 225 ----------KPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMET 274
P+ + Q M+ KR+ GH ++VYC FDR+GR + TGSDD LVKIW+ +
Sbjct: 155 LNGKYRLERLVPTAVYQHMKMHKRILGHLSSVYCVTFDRTGRRIFTGSDDCLVKIWATDD 214
Query: 275 AYCLASCRGHEGDITDLAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIA 334
LA+ RGH +I+D+AV+ N ++A+ S D +IRVW L P++VL+GH+A++T++
Sbjct: 215 GRLLATLRGHAAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPLAVLQGHSASITSLQ 274
Query: 335 FSPR-PGSVYQLLSSSDDGTC--RIWDARYSQFSPR--IYIPRPSDAVAGRNMAPSSSAG 389
FSP GS L S+ DGT +WDA + +PR + RP V
Sbjct: 275 FSPLCSGSKRYLSSTGADGTICFWLWDAGTLKINPRPAKFTERPRPGV------------ 322
Query: 390 PQSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYV 449
Q+ C +F+A G TGS+D + RV+ S QP +I L H + V+ +
Sbjct: 323 ----QMICSSFSAGGMFLATGSTDHIIRVYFF------GSGQP-EKISELEFHTDKVDSI 371
Query: 450 QFSGCAVASRFSLADSSKEDSTPKFKNSWFCHDNIVTCSRDGSAIIWIPRSRRSHPKAAR 509
QFS ++RF V+ SRDG+A IW + +R K+
Sbjct: 372 QFSN--TSNRF------------------------VSGSRDGTARIW--QFKRREWKSIL 403
Query: 510 WTQAYHLKVPPPPMPPQPPRGGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNA 569
A P G +I T V M+ W + V+ A+ + + VWN+
Sbjct: 404 LDMATR--------PAGQNLQGIEDKI--TKMKVTMVAWDRHDNTVITAVNNMTLKVWNS 453
Query: 570 ADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIR---------- 619
G L+H L GH + +VL+ HPF+PR+ SAG+DG IVWD+ G+ IR
Sbjct: 454 YTGQLIHVLMGHEDEVFVLEPHPFDPRVLFSAGHDGNVIVWDLARGVKIRSYFNMIEGQG 513
Query: 620 ---IYEISRFRDGASIILSDDVGQLYILNTGQGESQKDAKYDQ-FFLGDYRPLVQDTYGN 675
+++ DG +D G L I G S+ D DQ FF DYRPL++D
Sbjct: 514 HGAVFDCKCSPDGQHFACTDSHGHLLIFGFGSS-SKYDKIADQMFFHSDYRPLIRDANNF 572
Query: 676 VLDQETQLAPHRRNLQDP--LCDSAMIPYPEPYQTMYQQR 713
VLD++TQ APH L P L D P+P YQ + R
Sbjct: 573 VLDEQTQQAPH---LMPPPFLVDVDGNPHPSRYQRLVPGR 609
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 140/316 (44%), Gaps = 49/316 (15%)
Query: 1451 YIPQLGDEVVYLRQGHQEYIN-------YSGSREVGPWITVKGNIRAVEFCKVESLEYAT 1503
++PQ+GDEV Y RQGH+ Y+ YS + + PW K +R E K+ ++Y
Sbjct: 956 FVPQMGDEVYYFRQGHEAYVEMARKNKIYSINPKKQPW--HKMELREQELMKIVGIKYEV 1013
Query: 1504 ASGSGDSCCKMTLKFIDP-TSSVSNMTFRLTLPEVTGFPDFLVERTRFDAAIQRNWTCRD 1562
G CC + L F+DP T ++ +F + ++ DFLV R +FD A R W D
Sbjct: 1014 --GLPTLCC-LKLAFLDPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFDDAKYRRWNIGD 1070
Query: 1563 KCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPTETHLHSPWEL-- 1620
+ + S D +WW G + S +P E+PDS ++ Y V + TE SPW++
Sbjct: 1071 RFR------SVIDDAWWFGTIESQEPLQLEYPDSLFQCYNVCWDNGDTEKM--SPWDMEL 1122
Query: 1621 ------FDSDTQWEQPRIDDDNRNKLLSAF------AKLEQSANRVQDQYGVQKLKQVSQ 1668
F + P D + R+ + ++ R+ G+ +L +
Sbjct: 1123 IPNNAVFPEELGTSVPLTDGECRSLIYKPLDGEWGTNPRDEECERIV--AGINQLMTLDI 1180
Query: 1669 KTNFT-----NRFPV-------PLSLDVIQSRLENNYYRGLEAVKHDIAVMLSNAESYFG 1716
+ F +P+ P L I+ RLEN +YR + ++ ++ + N ++
Sbjct: 1181 ASAFVAPVDLQAYPMYCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNE 1240
Query: 1717 RNTDLSTKIKRLSDLV 1732
+ + K ++DL+
Sbjct: 1241 PGSPIVKSAKFVTDLL 1256
>sp|Q8VDD9|PHIP_MOUSE PH-interacting protein OS=Mus musculus GN=Phip PE=1 SV=2
Length = 1821
Score = 292 bits (747), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 221/700 (31%), Positives = 322/700 (46%), Gaps = 141/700 (20%)
Query: 51 EVYFLIMHFLSTGPCHRTYGQFWNELLEHQLLPRRYHAWYSRSGLPSGDENDDGMSFPLS 110
E+YFLI FL GPC + E+ E +LLPRR W G P +
Sbjct: 14 ELYFLIARFLEDGPCQQAAQVLIREVAEKELLPRRTD-W-------------TGKEHPRT 59
Query: 111 YNKLVERYPHIEKDHLVKLLKQLIINTSSPSRAMIGGDAPNAA-DVPTLLGRGSFSLLSY 169
Y LV+ Y H+ DHL+++ +L ++ + P + V TLLG G SLL
Sbjct: 60 YQNLVKYYRHLAPDHLLQICHRL--------GPLLEQEIPQSVPGVQTLLGAGRQSLLRT 111
Query: 170 DRDKGQNEIDHPPAHMRWPHMYADQVRGLGLREIGGGF-----TRHHRAPSIRAACYAIA 224
++ H+ W +G L + G + PSI ++
Sbjct: 112 NKS---------CKHVVW--------KGSALAALHCGRPPESPVNYGSPPSIADTLFSRK 154
Query: 225 ----------KPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMET 274
P+ + Q M+ KR+ GH ++VYC FDR+GR + TGSDD LVKIW+ +
Sbjct: 155 LNGKYRLERLVPTAVYQHMKMHKRILGHLSSVYCVTFDRTGRRIFTGSDDCLVKIWATDD 214
Query: 275 AYCLASCRGHEGDITDLAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIA 334
LA+ RGH +I+D+AV+ N ++A+ S D +IRVW L P++VL+GH+A++T++
Sbjct: 215 GRLLATLRGHAAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPLAVLQGHSASITSLQ 274
Query: 335 FSPR-PGSVYQLLSSSDDGTC--RIWDARYSQFSPR--IYIPRPSDAVAGRNMAPSSSAG 389
FSP GS L S+ DGT +WDA + +PR + RP V
Sbjct: 275 FSPLCSGSKRYLSSTGADGTICFWLWDAGTLKINPRPTKFTERPRPGV------------ 322
Query: 390 PQSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYV 449
Q+ C +F+A G TGS+D + RV+ S QP +I L H + V+ +
Sbjct: 323 ----QMICSSFSAGGMFLATGSTDHIIRVYFF------GSGQP-EKISELEFHTDKVDSI 371
Query: 450 QFSGCAVASRFSLADSSKEDSTPKFKNSWFCHDNIVTCSRDGSAIIWIPRSRRSHPKAAR 509
QFS ++RF V+ SRDG+A IW + +R K+
Sbjct: 372 QFSN--TSNRF------------------------VSGSRDGTARIW--QFKRREWKSIL 403
Query: 510 WTQAYHLKVPPPPMPPQPPRGGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNA 569
A P G +I T V M+ W + V+ A+ + + VWN+
Sbjct: 404 LDMATR--------PAGQNLQGIEDKI--TKMKVTMVAWDRHDNTVITAVNNMTLKVWNS 453
Query: 570 ADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIR---------- 619
G L+H L GH + +VL+ HPF+PR+ SAG+DG IVWD+ G+ +R
Sbjct: 454 YTGQLIHVLMGHEDEVFVLEPHPFDPRVLFSAGHDGNVIVWDLARGVKVRSYFNMIEGQG 513
Query: 620 ---IYEISRFRDGASIILSDDVGQLYILNTGQGESQKDAKYDQ-FFLGDYRPLVQDTYGN 675
+++ DG +D G L I G S+ D DQ FF DYRPL++D
Sbjct: 514 HGAVFDCKCSPDGQHFACTDSHGHLLIFGFGSS-SKYDKIADQMFFHSDYRPLIRDANNF 572
Query: 676 VLDQETQLAPHRRNLQDP--LCDSAMIPYPEPYQTMYQQR 713
VLD++TQ APH L P L D P+P YQ + R
Sbjct: 573 VLDEQTQQAPH---LMPPPFLVDVDGNPHPSRYQRLVPGR 609
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 140/315 (44%), Gaps = 47/315 (14%)
Query: 1451 YIPQLGDEVVYLRQGHQEYIN-------YSGSREVGPWITVKGNIRAVEFCKVESLEYAT 1503
++PQ+GDEV Y RQGH+ Y+ YS + + PW K +R E K+ ++Y
Sbjct: 956 FVPQMGDEVYYFRQGHEAYVEMARKNKIYSINPKKQPW--HKMELREQELMKIVGIKYEV 1013
Query: 1504 ASGSGDSCCKMTLKFIDP-TSSVSNMTFRLTLPEVTGFPDFLVERTRFDAAIQRNWTCRD 1562
G CC + L F+DP T ++ +F + ++ DFLV R +FD A R W D
Sbjct: 1014 --GLPTLCC-LKLAFLDPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFDDAKYRPWNIGD 1070
Query: 1563 KCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPTETHLHSPWEL-- 1620
+ + S D +WW G + S +P E+PDS ++ Y V + TE SPW++
Sbjct: 1071 RFR------SVIDDAWWFGTIESQEPLQPEYPDSLFQCYNVCWDNGDTEKM--SPWDMEL 1122
Query: 1621 ------FDSDTQWEQPRIDDDNRNKLLSAFAKLEQSANRVQDQY-----GVQKLKQVSQK 1669
F + P D + R+ + E AN ++ G+ +L +
Sbjct: 1123 IPNNAVFPEELGTSVPLTDVECRSLIYKPLDG-EWGANPRDEECERIVGGINQLMTLDIA 1181
Query: 1670 TNFT-----NRFPV-------PLSLDVIQSRLENNYYRGLEAVKHDIAVMLSNAESYFGR 1717
+ F +P+ P L I+ RLEN +YR ++ ++ + N ++
Sbjct: 1182 SAFVAPVDLQAYPMYCTVVAYPTDLSTIKQRLENRFYRRFSSLMWEVRYIEHNTRTFNEP 1241
Query: 1718 NTDLSTKIKRLSDLV 1732
+ + K ++DL+
Sbjct: 1242 GSPIVKSAKFVTDLL 1256
>sp|Q9NSI6|BRWD1_HUMAN Bromodomain and WD repeat-containing protein 1 OS=Homo sapiens
GN=BRWD1 PE=1 SV=4
Length = 2320
Score = 291 bits (745), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 213/693 (30%), Positives = 325/693 (46%), Gaps = 128/693 (18%)
Query: 51 EVYFLIMHFLSTGPCHRTYGQFWNELLEHQLLPRRYHAWYSRSGLPSGDENDDGMSFPLS 110
E+YFLI +LS GPC R EL ++QLLP+R W G+E++ S
Sbjct: 17 ELYFLIARYLSAGPCRRAAQVLVQELEQYQLLPKRLD-W-------EGNEHNR------S 62
Query: 111 YNKLVERYPHIEKDHLVKLLKQL--IINTSSPSRAMIGGDAPNAADVPTLLGRGSFSLLS 168
Y +LV H+ DHL+++ +++ +++ P P+ + V +LLG G SLL
Sbjct: 63 YEELVLSNKHVAPDHLLQICQRIGPMLDKEIP---------PSISRVTSLLGAGRQSLLR 113
Query: 169 YDRD------KGQNEIDHPPAHM-RWPHMYADQVRGLGLREIGGGFTRHHRAPSIR-AAC 220
+D KG H R P M + L EI HR + +
Sbjct: 114 TAKDCRHTVWKGSA---FAALHRGRPPEMPVNYGSPPNLVEI-------HRGKQLTGCST 163
Query: 221 YAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLAS 280
++ A P TM Q ++ +R+ GH +AVYC FDR+G + TGSDD LVKIWS L++
Sbjct: 164 FSTAFPGTMYQHIKMHRRILGHLSAVYCVAFDRTGHRIFTGSDDCLVKIWSTHNGRLLST 223
Query: 281 CRGHEGDITDLAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRP- 339
RGH +I+D+AV+ N ++A+ S D IIRVW L P++VL+GHT ++T++ FSP
Sbjct: 224 LRGHSAEISDMAVNYENTMIAAGSCDKIIRVWCLRTCAPVAVLQGHTGSITSLQFSPMAK 283
Query: 340 GSVYQLLSSSDDGTCRI--WDARYSQFSPR--IYIPRPSDAVAGRNMAPSSSAGPQSHQI 395
GS ++S+ DGT WD +FSPR + +P V Q+
Sbjct: 284 GSQRYMVSTGADGTVCFWQWDLESLKFSPRPLKFTEKPRPGV----------------QM 327
Query: 396 FCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCA 455
C +F+ G TGS+D + R++ + +I L H + V+ +QF C
Sbjct: 328 LCSSFSVGGMFLATGSTDHVIRMYFL-------GFEAPEKIAELESHTDKVDSIQF--CN 378
Query: 456 VASRFSLADSSKEDSTPKFKNSWFCHDNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYH 515
RF ++ SRDG+A IW R + ++ A
Sbjct: 379 NGDRF------------------------LSGSRDGTARIW--RFEQLEWRSILLDMATR 412
Query: 516 LKVPPPPMPPQPPRGGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLV 575
+ +R + P+ V MI W+ ++ V+ A+ D + VWN+ G L+
Sbjct: 413 I---------SGDLSSEEERFM-KPK-VTMIAWNQNDSIVVTAVNDHVLKVWNSYTGQLL 461
Query: 576 HSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIR-------------IYE 622
H+L GH + +VL+ HPF+ RI +SAG+DG +WDI +G ++ +++
Sbjct: 462 HNLMGHADEVFVLETHPFDSRIMLSAGHDGSIFIWDITKGTKMKHYFNMIEGQGHGAVFD 521
Query: 623 ISRFRDGASIILSDDVGQLYILNTGQGESQKDAKYDQFFLGDYRPLVQDTYGNVLDQETQ 682
+DG +D G L I G + + FF DYRPL++D+ VLD++TQ
Sbjct: 522 CKFSQDGQHFACTDSHGHLLIFGFGCSKPYEKIPDQMFFHTDYRPLIRDSNNYVLDEQTQ 581
Query: 683 LAPHRRNLQDP--LCDSAMIPYPEPYQTMYQQR 713
APH L P L D P+P YQ + R
Sbjct: 582 QAPH---LMPPPFLVDVDGNPHPTKYQRLVPGR 611
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 152/330 (46%), Gaps = 46/330 (13%)
Query: 1439 WLMLSTHEEGSRYIPQLGDEVVYLRQGHQEYIN-------YSGSREVGPWITVKGNIRAV 1491
W+ +T + S ++PQ+GDEV+Y RQGH+ YI Y + PW K ++R
Sbjct: 946 WITDTTLRK-SPFVPQMGDEVIYFRQGHEAYIEAVRRNNIYELNPNKEPW--RKMDLRDQ 1002
Query: 1492 EFCKVESLEYATASGSGDSCCKMTLKFIDP-TSSVSNMTFRLTLPEVTGFPDFLVERTRF 1550
E K+ + Y G CC + L FIDP T + + +F + ++ DFLV R +
Sbjct: 1003 ELVKIVGIRYEV--GPPTLCC-LKLAFIDPATGKLMDKSFSIRYHDMPDVIDFLVLRQFY 1059
Query: 1551 DAAIQRNWTCRDKCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPT 1610
D A QRNW D+ + S D +WW G VLS +P ++PDS ++ Y V++ + T
Sbjct: 1060 DEARQRNWQSCDRFR------SIIDDAWWFGTVLSQEPYQPQYPDSHFQCYIVRW--DNT 1111
Query: 1611 ETHLHSPWELFDSDTQWEQPR-------IDDDNRNKLL---SAFAKLEQSANRVQDQY-- 1658
E SPW++ + P + D KLL A ++S + D+
Sbjct: 1112 EIEKLSPWDMEPIPDNVDPPEELGASISVTTDELEKLLYKPQAGEWGQKSRDEECDRIIS 1171
Query: 1659 GVQKLKQVSQKTNFTN-----RFP-------VPLSLDVIQSRLENNYYRGLEAVKHDIAV 1706
G+ +L + F +P P L I+ RL N +YR L A+ ++
Sbjct: 1172 GIDQLLNLDIAAAFAGPVDLCTYPKYCTVVAYPTDLYTIRMRLVNRFYRRLSALVWEVRY 1231
Query: 1707 MLSNAESYFGRNTDLSTKIKRLSDLVTRTL 1736
+ NA ++ + ++ K+++D + + +
Sbjct: 1232 IEHNARTFNEPESVIARSAKKITDQLLKFI 1261
>sp|Q921C3|BRWD1_MOUSE Bromodomain and WD repeat-containing protein 1 OS=Mus musculus
GN=Brwd1 PE=1 SV=2
Length = 2304
Score = 289 bits (739), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 217/704 (30%), Positives = 326/704 (46%), Gaps = 128/704 (18%)
Query: 40 PAELDVDVDLREVYFLIMHFLSTGPCHRTYGQFWNELLEHQLLPRRYHAWYSRSGLPSGD 99
PA V + E+YFLI +LS GPC R EL ++QLLP+R W G+
Sbjct: 6 PARRPVPLIESELYFLIARYLSAGPCRRAAQVLVQELEQYQLLPKRLD-W-------EGN 57
Query: 100 ENDDGMSFPLSYNKLVERYPHIEKDHLVKLLKQL--IINTSSPSRAMIGGDAPNAADVPT 157
E++ SY +LV H+ DHL+++ +++ +++ P P+ + V +
Sbjct: 58 EHNR------SYEELVLSNKHVAPDHLLQICQRIGPMLDKEVP---------PSISRVTS 102
Query: 158 LLGRGSFSLLSYDRD------KGQNEIDHPPAHM-RWPHMYADQVRGLGLREIGGGFTRH 210
LLG G SLL +D KG H R P M + L EI
Sbjct: 103 LLGAGRQSLLRTAKDCRHTVWKGSA---FAALHRGRPPEMPVNYGPPPSLVEI------- 152
Query: 211 HRAPSIR-AACYAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKI 269
HR + + ++ A P TM Q ++ +R+ GH +AVYC FDR+G + TGSDD LVKI
Sbjct: 153 HRGRQLTGCSTFSTAFPGTMYQHIKMHRRILGHLSAVYCVAFDRTGHRIFTGSDDCLVKI 212
Query: 270 WSMETAYCLASCRGHEGDITDLAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAA 329
WS L++ RGH +I+D+AV+ N L+A+ S D IIRVW L P++VL+GHT +
Sbjct: 213 WSTHNGRLLSTLRGHSAEISDMAVNYENTLIAAGSCDKIIRVWCLRTCAPVAVLQGHTGS 272
Query: 330 VTAIAFSPRP-GSVYQLLSSSDDGTCRI--WDARYSQFSPR--IYIPRPSDAVAGRNMAP 384
+T++ FSP G ++S+ DGT WD +FSPR + +P V
Sbjct: 273 ITSLQFSPMAKGPQRYMVSTGADGTVCFWQWDLESLKFSPRPLKFTEKPRPGV------- 325
Query: 385 SSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHEN 444
Q+ C +F+ G TGS+D + R++ D P +I L H +
Sbjct: 326 ---------QMLCSSFSVGGMFLATGSTDHVIRMYFL------GFDAP-EKIAELESHTD 369
Query: 445 DVNYVQFSGCAVASRFSLADSSKEDSTPKFKNSWFCHDNIVTCSRDGSAIIWIPRSRRSH 504
V+ +QF C RF ++ SRDG+A IW
Sbjct: 370 KVDSIQF--CNNGDRF------------------------LSGSRDGTARIW-------- 395
Query: 505 PKAARWTQAYHLKVPPPPMPPQPPRGGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRI 564
R+ Q + + P+ V MI W+ D+ V+ A+ D +
Sbjct: 396 ----RFEQLEWRSILLDMSARISGDTSSEEERFMKPK-VTMIAWNQDDSTVVTAVNDHVL 450
Query: 565 CVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIR----- 619
VW++ G L+H+L GH + +VL+ HPF+ RI +SAG+DG +WDI +GI ++
Sbjct: 451 KVWSSYTGQLLHNLLGHADEVFVLETHPFDSRIMLSAGHDGSIFIWDITKGIKMKHYFNM 510
Query: 620 --------IYEISRFRDGASIILSDDVGQLYILNTGQGESQKDAKYDQFFLGDYRPLVQD 671
+++ +DG +D G L I G + + FF DYRPL++D
Sbjct: 511 IEGQGHGAVFDCKFSQDGQHFACTDSHGHLLIFGFGCSKPYEKIPDQMFFHTDYRPLIRD 570
Query: 672 TYGNVLDQETQLAPHRRNLQDP--LCDSAMIPYPEPYQTMYQQR 713
+ VLD++TQ APH L P L D P+P +Q + R
Sbjct: 571 SNNYVLDEQTQQAPH---LMPPPFLVDVDGNPHPTKFQRLVPGR 611
Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 150/331 (45%), Gaps = 48/331 (14%)
Query: 1439 WLMLSTHEEGSRYIPQLGDEVVYLRQGHQEYIN-------YSGSREVGPWITVKGNIRAV 1491
W+ +T + S ++PQ+GDEV+Y RQGH+ YI Y + PW K ++R
Sbjct: 947 WITDTTLRK-SPFVPQMGDEVMYFRQGHEAYIEAVRRNNIYELNPHKEPW--RKMDLRDQ 1003
Query: 1492 EFCKVESLEYATASGSGDSCCKMTLKFIDP-TSSVSNMTFRLTLPEVTGFPDFLVERTRF 1550
E K+ L Y G CC + L FIDP T +++ +F + ++ DFLV R +
Sbjct: 1004 ELVKIVGLRYEV--GPPTLCC-LKLAFIDPATGRLTDKSFSIRYHDMPDVIDFLVLRQFY 1060
Query: 1551 DAAIQRNWTCRDKCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPT 1610
D A QRNW D+ + S D +WW G VLS +P ++PDS ++ Y V++ T
Sbjct: 1061 DEARQRNWQPCDRFR------SIIDDAWWFGTVLSQEPYQPQYPDSHFQCYIVRWDN--T 1112
Query: 1611 ETHLHSPWELFDSDTQWEQPR-------IDDDNRNKLLSAFAKLEQSANRVQDQYGVQKL 1663
ET SPW++ + P + D KLL + E R +D+ + +
Sbjct: 1113 ETEKLSPWDMEPIPDNVDPPEELGASISVTSDELEKLLYKPQEGEW-GQRSRDEECDRII 1171
Query: 1664 KQVSQKTN------------------FTNRFPVPLSLDVIQSRLENNYYRGLEAVKHDIA 1705
+ Q N + P L I+ RL N +YR L A+ ++
Sbjct: 1172 SGIDQLLNLDIAAAFAGPVDLCTYPKYCTVVAYPTDLYTIRMRLVNRFYRRLSALIWEVR 1231
Query: 1706 VMLSNAESYFGRNTDLSTKIKRLSDLVTRTL 1736
+ NA ++ + ++ K+++D + + +
Sbjct: 1232 YIEHNARTFNEPESVIARSAKKITDQLLKFI 1262
>sp|Q6RI45|BRWD3_HUMAN Bromodomain and WD repeat-containing protein 3 OS=Homo sapiens
GN=BRWD3 PE=1 SV=2
Length = 1802
Score = 266 bits (680), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 206/684 (30%), Positives = 311/684 (45%), Gaps = 107/684 (15%)
Query: 51 EVYFLIMHFLSTGPCHRTYGQFWNELLEHQLLPRRYHAWYSRSGLPSGDENDDGMSFPLS 110
E+Y+LI FL +GPC+++ EL EHQL+PRR W +G S
Sbjct: 11 ELYYLIARFLQSGPCNKSAQVLVQELEEHQLIPRRLD-W-------------EGKEHRRS 56
Query: 111 YNKLVERYPHIEKDHLVKLLKQLIINTSSPSRAMIGGDAPNAA-DVPTLLGRGSFSLLSY 169
+ LV HI D+L+K+ +++ ++ + P + V TLLG G SLL
Sbjct: 57 FEDLVAANAHIPPDYLLKICERI--------GPLLDKEIPQSVPGVQTLLGVGRQSLLRD 108
Query: 170 DRDKGQ---NEIDHPPAHM-RWPHMYADQVRGLGLREIGGGFTRHHRAPSIRAACYAIAK 225
+D N H R P + + V+ + I R S +
Sbjct: 109 AKDCKSTLWNGSAFAALHRGRPPELPVNYVKPPNVVNITSA--RQLTGCSRFGHIF---- 162
Query: 226 PSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHE 285
PS+ Q ++ KR+ GH ++VYC FDRSGR + TGSDD LVKIW+ + LA+ RGH
Sbjct: 163 PSSAYQHIKMHKRILGHLSSVYCVAFDRSGRRIFTGSDDCLVKIWATDDGRLLATLRGHS 222
Query: 286 GDITDLAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSP-RPGSVYQ 344
+I+D+AV+ N L+A+ S D ++RVW L P++VL+GH+A++T+I F P G+
Sbjct: 223 AEISDMAVNYENTLIAAGSCDKVVRVWCLRTCAPVAVLQGHSASITSIQFCPSTKGTNRY 282
Query: 345 LLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANG 404
L S+ DGT W R R + + + P QI C +F++ G
Sbjct: 283 LTSTGADGTICFWQWHVKTMKFR-----------DRPVKFTERSRP-GVQISCSSFSSGG 330
Query: 405 TVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLAD 464
TGS+D + R++ S+ P +I L H + V VQF + RF
Sbjct: 331 MFITTGSTDHVIRIYYL------GSEVP-EKIAELESHTDKVVAVQFCNNGDSLRF---- 379
Query: 465 SSKEDSTPKFKNSWFCHDNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVPPPPMP 524
V+ SRDG+A IW + W ++ L +
Sbjct: 380 --------------------VSGSRDGTARIW-------QYQQQEW-KSIVLDMATKMTG 411
Query: 525 PQPPRGGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTES 584
P G + T V M+ W + V+ A+ + + VWN+ G L+H+L+GH +
Sbjct: 412 NNLPSGEDK----ITKLKVTMVAWDRYDTTVITAVNNFLLKVWNSITGQLLHTLSGHDDE 467
Query: 585 TYVLDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIR-------------IYEISRFRDGAS 631
+VL+ HPF+ RI +SAG+DG +WD+ G IR +++ DG
Sbjct: 468 VFVLEAHPFDQRIILSAGHDGNIFIWDLDRGTKIRNYFNMIEGQGHGAVFDCKFSPDGNH 527
Query: 632 IILSDDVGQLYILNTGQGESQKDAKYDQFFLGDYRPLVQDTYGNVLDQETQLAPHRRNLQ 691
+D G L + G + + FF DYRPL++D VLD++TQ APH L
Sbjct: 528 FACTDSHGHLLLFGFGCSKYYEKIPDQMFFHTDYRPLIRDANNYVLDEQTQQAPH---LM 584
Query: 692 DP--LCDSAMIPYPEPYQTMYQQR 713
P L D P+P +Q + R
Sbjct: 585 PPPFLVDVDGNPHPTKFQRLVPGR 608
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 154/332 (46%), Gaps = 53/332 (15%)
Query: 1441 MLSTHEEGSRYIPQLGDEVVYLRQGHQEYIN-------YSGSREVGPWITVKGNIRAVEF 1493
+L T S ++PQ+GDE++Y RQGH+ Y+ YS + + PW K ++R EF
Sbjct: 928 ILDTIPRRSPFVPQMGDELIYFRQGHEAYVRAVRKSKIYSVNLQKQPW--NKMDLREQEF 985
Query: 1494 CKVESLEYATASGSGDSCCKMTLKFIDPTS-SVSNMTFRLTLPEVTGFPDFLVERTRFDA 1552
K+ ++Y G CC + L F+DP S ++ +F + ++ DFLV ++
Sbjct: 986 VKIVGIKYEV--GPPTLCC-LKLAFLDPISGKMTGESFSIKYHDMPDVIDFLVLHQFYNE 1042
Query: 1553 AIQRNWTCRDKCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPTET 1612
A +RNW D+ + S D +WW G V S +P E+PDS ++ Y+V + E
Sbjct: 1043 AKERNWQIGDRFR------SIIDDAWWFGTVESQQPFQPEYPDSSFQCYSVHWDN--NER 1094
Query: 1613 HLHSPWEL--------FDSDTQWEQPRIDDDNRNKLL--------SAFAKLEQSANRVQD 1656
SPW++ F + P + + LL A ++ E+ +Q
Sbjct: 1095 EKMSPWDMEPIPEGTAFPDEVGAGVP-VSQEELTALLYKPQEGEWGAHSRDEECERVIQ- 1152
Query: 1657 QYGVQKLKQVSQKTNFT-----NRFPV-------PLSLDVIQSRLENNYYRGLEAVKHDI 1704
G+ L + + F + +P+ P L+ I+ RLEN +YR + A+ ++
Sbjct: 1153 --GINHLLSLDFASPFAVPVDLSAYPLYCTVVAYPTDLNTIRRRLENRFYRRISALMWEV 1210
Query: 1705 AVMLSNAESYFGRNTDLSTKIKRLSDLVTRTL 1736
+ NA ++ ++ + K ++D++ R +
Sbjct: 1211 RYIEHNARTFNEPDSPIVKAAKIVTDVLLRFI 1242
>sp|A2AHJ4|BRWD3_MOUSE Bromodomain and WD repeat-containing protein 3 OS=Mus musculus
GN=Brwd3 PE=2 SV=1
Length = 1799
Score = 262 bits (670), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 204/684 (29%), Positives = 310/684 (45%), Gaps = 107/684 (15%)
Query: 51 EVYFLIMHFLSTGPCHRTYGQFWNELLEHQLLPRRYHAWYSRSGLPSGDENDDGMSFPLS 110
E+Y+LI FL +GPC+++ EL EHQL+PRR W +G S
Sbjct: 11 ELYYLIARFLQSGPCNKSAQVLVQELEEHQLIPRRLD-W-------------EGKEHRRS 56
Query: 111 YNKLVERYPHIEKDHLVKLLKQLIINTSSPSRAMIGGDAPNAA-DVPTLLGRGSFSLLSY 169
+ LV HI D+L+K+ +++ ++ + P + V TLLG G SLL
Sbjct: 57 FEDLVAANAHIPPDYLLKICERI--------GPLLDKEIPQSVPGVQTLLGVGRQSLLRD 108
Query: 170 DRDKGQ---NEIDHPPAHM-RWPHMYADQVRGLGLREIGGGFTRHHRAPSIRAACYAIAK 225
+D N H R P + + V+ + I R S + +
Sbjct: 109 AKDCKSTLWNGSAFAALHRGRPPELPVNYVKPPNVVNITSA--RQLTGCSRFSHVF---- 162
Query: 226 PSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHE 285
PS+ Q ++ KR+ GH ++VYC FDRSGR + TGSDD LVKIW+ + LA+ RGH
Sbjct: 163 PSSAYQHIKMHKRILGHLSSVYCVAFDRSGRRIFTGSDDCLVKIWATDDGRLLATLRGHS 222
Query: 286 GDITDLAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSP-RPGSVYQ 344
+I+D+AV+ N L+A+ S D ++RVW L P++VL+GH+A++T+I F P G+
Sbjct: 223 AEISDMAVNYENTLIAAGSCDKVVRVWCLRTCAPVAVLQGHSASITSIQFCPSTKGTTRY 282
Query: 345 LLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANG 404
L S+ DGT W R R + + + P QI C +F++ G
Sbjct: 283 LTSTGADGTICFWQWHVKTMKFR-----------DRPVKFTERSRP-GVQISCSSFSSGG 330
Query: 405 TVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLAD 464
TGS+D + R++ S+ P +I L H + V VQF + RF
Sbjct: 331 MFITTGSTDHVIRIYYL------GSEIP-EKIAELESHTDKVVAVQFCNNGDSLRF---- 379
Query: 465 SSKEDSTPKFKNSWFCHDNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVPPPPMP 524
V+ SRDG+A IW + ++ K+ A +
Sbjct: 380 --------------------VSGSRDGTARIW--QYQQQEWKSIVLDMATKMS------- 410
Query: 525 PQPPRGGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTES 584
T V M+ W + V+ A+ + + VWN+ G L+H+L+GH +
Sbjct: 411 ---GNNLTSAEDKVTKLKVTMVAWDRYDTTVITAVNNFLLKVWNSVTGQLLHTLSGHDDE 467
Query: 585 TYVLDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIR-------------IYEISRFRDGAS 631
+VL+ HPF+ RI +SAG+DG +WD+ G IR +++ DG
Sbjct: 468 VFVLEAHPFDQRIILSAGHDGNIFIWDLDRGTKIRNYFNMIEGQGHGAVFDCKFSPDGNH 527
Query: 632 IILSDDVGQLYILNTGQGESQKDAKYDQFFLGDYRPLVQDTYGNVLDQETQLAPHRRNLQ 691
+D G L + G + + FF DYRPL++D VLD++TQ APH L
Sbjct: 528 FACTDSHGHLLLFGFGCSKYYEKIPDQMFFHTDYRPLIRDANNYVLDEQTQQAPH---LM 584
Query: 692 DP--LCDSAMIPYPEPYQTMYQQR 713
P L D P+P +Q + R
Sbjct: 585 PPPFLVDVDGNPHPTKFQRLVPGR 608
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 156/338 (46%), Gaps = 57/338 (16%)
Query: 1439 WL----MLSTHEEGSRYIPQLGDEVVYLRQGHQEYIN-------YSGSREVGPWITVKGN 1487
WL +L T S ++PQ+GDE++Y RQGH+ Y+ YS + + PW K +
Sbjct: 920 WLAPQWILDTIPRRSPFVPQMGDELIYFRQGHEAYVRAVRKSKIYSVNLQKQPW--NKMD 977
Query: 1488 IRAVEFCKVESLEYATASGSGDSCCKMTLKFIDPTS-SVSNMTFRLTLPEVTGFPDFLVE 1546
+R EF K+ ++Y G CC + L F+DP S ++ +F + ++ DFLV
Sbjct: 978 LREQEFVKIVGIKYEI--GPPTLCC-LKLAFLDPISGKMTGESFSIKYHDMPDVIDFLVL 1034
Query: 1547 RTRFDAAIQRNWTCRDKCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYK 1606
++ A +RNW D+ + S D +WW G V S +P E+PDS ++ Y+V +
Sbjct: 1035 HQFYNEAKERNWQIGDRFR------SIIDDAWWFGTVESQQPFQPEYPDSSFQCYSVHWD 1088
Query: 1607 TEPTETHLHSPWEL--------FDSDTQWEQPRIDDDNRNKLL--------SAFAKLEQS 1650
E SPW++ F + P + + LL A ++ E+
Sbjct: 1089 N--NEREKMSPWDMEPIPDGTAFPDEVGAGIP-VSQEELTALLYKPQEGEWGAHSRDEEC 1145
Query: 1651 ANRVQDQYGVQKLKQVSQKTNFT-----NRFPV-------PLSLDVIQSRLENNYYRGLE 1698
+Q G+ L + + F + +P+ P L+ I+ RLEN +YR +
Sbjct: 1146 ERVIQ---GINNLLSLDFASPFAVPVDLSAYPLYCTVVAYPTDLNTIKQRLENRFYRRIS 1202
Query: 1699 AVKHDIAVMLSNAESYFGRNTDLSTKIKRLSDLVTRTL 1736
A+ ++ + NA ++ ++ + K ++D++ R +
Sbjct: 1203 ALMWEVRYIEHNARTFNEPDSPIVKAAKIVTDVLLRFI 1240
>sp|Q54MP8|Y5837_DICDI Bromodomain and WD repeat-containing DDB_G0285837 OS=Dictyostelium
discoideum GN=DDB_G0285837 PE=4 SV=1
Length = 2200
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 146/333 (43%), Gaps = 63/333 (18%)
Query: 391 QSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQ 450
++++I N GT+ V S D+ ++W+ P ++ L GH + +Q
Sbjct: 549 KTNEITGTTMNKGGTLIV-ASVDSSLKIWSTLF-------NPPKLVNTLEGHPTTILALQ 600
Query: 451 FSGCAVASRFSLADSSKEDSTPKFKNSWFCHDNIVTCSRDGSAIIWIPRSRRSHPKAARW 510
+S + D IV+ S DG+ IIW H +W
Sbjct: 601 YSHGS--------------------------DAIVSGSYDGTVIIW------RHSGGPKW 628
Query: 511 TQA-YHLKVPPPPMPPQPPRGGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNA 569
+++K P P+ ++ + ++WS D+RF++ + I VWN+
Sbjct: 629 DHVIFNIK---NTQRPNQANSHPK-KVARSKATFKNVIWSHDDRFIITTDYNM-IRVWNS 683
Query: 570 ADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIRIYEISR--FR 627
DGS + HT YV HPF+ R+ MS+GYD + I+W I G I+ + + F+
Sbjct: 684 LDGSFHLEMAEHTSEVYVTSCHPFDSRLIMSSGYDSQVILWSIETGEIIKKFVLQEPGFQ 743
Query: 628 ----------DGASIILSDDVGQLYILNTGQGESQKDAKY----DQFFLGDYRPLVQDTY 673
DG I+++ G+ ++ G G + K +Q+FL DY PL++D
Sbjct: 744 CQILDGCFSPDGQKFIVTNSTGKWFMFELGLGSDINNLKKLVPNEQYFLTDYHPLIRDAN 803
Query: 674 GNVLDQETQLAPHRRNLQDPLCDSAMIPYPEPY 706
GNVLD+ TQ PH + L + +PYP+ Y
Sbjct: 804 GNVLDELTQTPPHLM-PRAMLVNYQGLPYPDHY 835
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 84/140 (60%), Gaps = 9/140 (6%)
Query: 226 PSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHE 285
P + +N V GH+ YC FD+SGR TGSDD LVK+WS + +A+ RGH
Sbjct: 337 PISFYSNFKNSLIVYGHKAPTYCLQFDKSGRLYFTGSDDHLVKVWSTYSGRLIATLRGHL 396
Query: 286 GDITDLAVSSNNALVASASNDCIIRVWRLPDGL--PISVLRGHTAAV----TAIAFSPRP 339
GDITD+ S +N+L+A+ASND +IR+W L I+ L GH +V T+I+F P
Sbjct: 397 GDITDMCTSFDNSLLATASNDNVIRIWNLNSNQYDSIASLTGHDPSVNNTITSISFLSNP 456
Query: 340 GSVYQLLSSSDD-GTCRIWD 358
+ +LL SSD G C++W+
Sbjct: 457 TT--RLLVSSDSFGQCKLWN 474
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 70/160 (43%), Gaps = 15/160 (9%)
Query: 1489 RAVEFCKVESLEYATASGSGDSCCKMTLKFID----PTSSVSNMTFRLTLPEVTGFPDFL 1544
++ + C +++L Y + L D P + F + V+ PD+L
Sbjct: 1304 KSYQECIIKNLNYFISPDGTHKVVITLLPVFDQQVPPQNQNDESNFYTVIYHVSDIPDYL 1363
Query: 1545 VERTRFDAAIQRNWTCRDK-CKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTV 1603
V ++ ++ +WT +K ++++ W++G ++ + FP+SPWE V
Sbjct: 1364 VLASKVRKSMLTDWTVPNKRFRMFYPA-----SGWYNGTIIEISDSDPLFPNSPWENIKV 1418
Query: 1604 QYKTEPTETHLHSPWEL---FDSDTQWEQPR-IDDDNRNK 1639
+ E ++ WE+ FD D ++ + I D+N N+
Sbjct: 1419 LWDDTEEEDRVNY-WEIDEKFDDDQNPQKIKEIKDENENE 1457
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 1675 RF-PVPLSLDVIQSRLENNYYRGLEAVKHDIAVMLSNAESYFGRNTDLSTKIK----RLS 1729
RF P P+ + I RLE++YYR L+A+ D +++ +A Y NT ++ K R+S
Sbjct: 1758 RFVPHPMDISTIIKRLESSYYRSLDAIYFDAKLIMIDAYVYNKPNTMVAKNSKLVFHRIS 1817
Query: 1730 DLV 1732
D++
Sbjct: 1818 DIL 1820
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 1439 WLMLSTHEEGSRYIPQLGDEVVYLRQGHQEYI 1470
WL +++ + Y PQ+GD + Y QGH +Y+
Sbjct: 1203 WLSITSTTSETFYSPQVGDFIFYFYQGHTKYL 1234
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 183/449 (40%), Gaps = 72/449 (16%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNA 298
++GH + V +F G + +G DD++V++W + + CL + +G+ + L S N
Sbjct: 1070 LQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGV 1129
Query: 299 LVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
+A+ S+D I+R+W + + L+GHT V A+AFSP + L S S D T R+WD
Sbjct: 1130 TLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGAT---LASGSGDQTVRLWD 1186
Query: 359 ARYSQ-----------FSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFC---------- 397
S+ + ++ P S +G + S + C
Sbjct: 1187 ISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVN 1246
Query: 398 -CAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS--GC 454
FN +G++ +GSSD R+W+ + GH N VN V F+ G
Sbjct: 1247 SVVFNPDGSMLASGSSDKTVRLWDISSSKC---------LHTFQGHTNWVNSVAFNPDGS 1297
Query: 455 AVAS-------RFSLADSSKEDSTPKFKNSWFCHDNIVTCSRDGSAI----------IWI 497
+AS R SSK T + SW VT S DG+ + +W
Sbjct: 1298 MLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSS---VTFSPDGTMLASGSDDQTVRLWS 1354
Query: 498 PRSRRSHPKAARWTQAYHLKVPPPPMPPQPPRGGPRQ---------RILPTPRG----VN 544
S T + P G + + L T +G V
Sbjct: 1355 ISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVG 1414
Query: 545 MIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYD 604
IV+S D + + D + +WN + G +++L GH S V V + + +++G D
Sbjct: 1415 SIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINS--VRSVAFSSDGLILASGSD 1472
Query: 605 GKTI-VWDIWEGIPIRIYEISRFRDGASI 632
+TI +WD+ G I+ + + +G +I
Sbjct: 1473 DETIKLWDVKTGECIKTLKSEKIYEGMNI 1501
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 159/398 (39%), Gaps = 83/398 (20%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNAL 299
+GH VY F+ G + TGS D+ V++W + ++ C +GH + + SS+ A+
Sbjct: 987 QGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAM 1046
Query: 300 VASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA 359
+AS S+D +R+W + G + L+GHT+ V ++ FSP L S DD R+WD
Sbjct: 1047 LASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGA---MLASGGDDQIVRLWD- 1102
Query: 360 RYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVW 419
++ N + G S F F+ NG GSSD + R+W
Sbjct: 1103 -----------------ISSGN-CLYTLQGYTSWVRF-LVFSPNGVTLANGSSDQIVRLW 1143
Query: 420 NACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS--GCAVAS-------RFSLADSSKEDS 470
+ + L GH N VN V FS G +AS R SSK
Sbjct: 1144 DISSKKC---------LYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLY 1194
Query: 471 TPKFKNSWFCHDNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVPPPPMPPQPPRG 530
+ SW N V + DGS + S S W
Sbjct: 1195 ILQGHTSWV---NSVVFNPDGSTL----ASGSSDQTVRLWEI------------------ 1229
Query: 531 GPRQRILPTPRG----VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTY 586
+ L T +G VN +V++ D + + D + +W+ + +H+ GHT +
Sbjct: 1230 -NSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTN--W 1286
Query: 587 VLDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIRIYEIS 624
V V FNP +M A G V R++EIS
Sbjct: 1287 VNSV-AFNPDGSMLASGSGDQTV---------RLWEIS 1314
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 105/223 (47%), Gaps = 38/223 (17%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNAL 299
+GH + V F + G+ + +GSDD+ V++W + + CL + +GH + + S N+ +
Sbjct: 903 KGHNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLM 962
Query: 300 VASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA 359
+AS S+D +R+W + G + + +GHT V ++AF+ GS+ L + S D T R+WD
Sbjct: 963 LASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFN-LDGSM--LATGSGDQTVRLWDI 1019
Query: 360 RYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQ--IFCCAFNANGTVFVTGSSDTLAR 417
SQ YI Q H + F+++G + +GS D R
Sbjct: 1020 SSSQC---FYI-------------------FQGHTSCVRSVVFSSDGAMLASGSDDQTVR 1057
Query: 418 VWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS--GCAVAS 458
+W+ N + L GH + V V FS G +AS
Sbjct: 1058 LWDISSGNC---------LYTLQGHTSCVRSVVFSPDGAMLAS 1091
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 245 AVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNALVASAS 304
+V F G+ TG +V+ W T L +C+GH + + S + ++AS S
Sbjct: 866 SVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKMLASGS 925
Query: 305 NDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQF 364
+D +R+W + G + +GHT+ V ++ FSP L S S D T R+WD +
Sbjct: 926 DDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNS---LMLASGSSDQTVRLWDISSGEC 982
Query: 365 SPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACKP 424
+YI + + ++ AFN +G++ TGS D R+W+
Sbjct: 983 ---LYIFQ-----------------GHTGWVYSVAFNLDGSMLATGSGDQTVRLWDI--- 1019
Query: 425 NTDDSDQPNHEIDVLSGHENDVNYVQFS--GCAVAS 458
S Q + + GH + V V FS G +AS
Sbjct: 1020 ---SSSQCFY---IFQGHTSCVRSVVFSSDGAMLAS 1049
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 23/135 (17%)
Query: 286 GDITDLAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQL 345
G + +A S + L A+ + I+R W G + +GH + V ++ FS + G + L
Sbjct: 865 GSVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFS-QDGKM--L 921
Query: 346 LSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGT 405
S SDD T R+WD Q + + ++ F+ N
Sbjct: 922 ASGSDDQTVRLWDISSGQ--------------------CLKTFKGHTSRVRSVVFSPNSL 961
Query: 406 VFVTGSSDTLARVWN 420
+ +GSSD R+W+
Sbjct: 962 MLASGSSDQTVRLWD 976
>sp|P25382|NLE1_YEAST Ribosome assembly protein 4 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RSA4 PE=1 SV=3
Length = 515
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 167/395 (42%), Gaps = 81/395 (20%)
Query: 239 VRGHRNAVYCAIFD-RSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNN 297
+ GH + + C+ F + ++TG+ D +IW +T + + +GH + ++ S +
Sbjct: 139 IAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDG 198
Query: 298 ALVASASNDCIIRVWRLPDGLPIS-VLRGHTAAVTAIAFSP----RPGSVYQLLSSSDDG 352
++A+ S D IR+W G + LRGH+ +T++++ P +PGS +L SSS DG
Sbjct: 199 EVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDG 258
Query: 353 TCRIWD--ARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTG 410
T +IWD +R Q++ ++G ++ + C + G ++ +G
Sbjct: 259 TIKIWDTVSRVCQYT-----------MSG-----------HTNSVSCVKWGGQGLLY-SG 295
Query: 411 SSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDS 470
S D RVW D + I++L H + VN++ S + + K+ S
Sbjct: 296 SHDRTVRVW--------DINSQGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKPS 347
Query: 471 TPK------FKN-SWFCHDN------IVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLK 517
TP+ +N C N +VT S D + +W P
Sbjct: 348 TPEEAQKKALENYEKICKKNGNSEEMMVTASDDYTMFLWNPLKSTK-------------- 393
Query: 518 VPPPPMPPQPPRGGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHS 577
P R+ + VN + +S D R++++A D I +W+ DG + +
Sbjct: 394 --------------PIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFIST 439
Query: 578 LTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDI 612
GH S Y + + R+ +S D VWD+
Sbjct: 440 FRGHVASVYQV-AWSSDCRLLVSCSKDTTLKVWDV 473
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 248 CAIFDRSGRYVITGSDDRLVKIWS-METAYCLASCRGHEGDITDLAVSSNNALVASASND 306
C S ++T SDD + +W+ +++ +A GH+ + +A S + + SAS D
Sbjct: 364 CKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFD 423
Query: 307 CIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSP 366
I++W DG IS RGH A+V +A+S L+S S D T ++WD R + S
Sbjct: 424 NSIKLWDGRDGKFISTFRGHVASVYQVAWS---SDCRLLVSCSKDTTLKVWDVRTRKLS- 479
Query: 367 RIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
+ +P D +++ ++ +G +G D + R+W
Sbjct: 480 -VDLPGHKD------------------EVYTVDWSVDGKRVCSGGKDKMVRLWT 514
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 3/128 (2%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
++ + I R+ GH+ V F GRY+++ S D +K+W +++ RGH +
Sbjct: 389 LKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVY 448
Query: 290 DLAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
+A SS+ L+ S S D ++VW + L GH V + +S V S
Sbjct: 449 QVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRV---CSGG 505
Query: 350 DDGTCRIW 357
D R+W
Sbjct: 506 KDKMVRLW 513
>sp|P38129|TAF5_YEAST Transcription initiation factor TFIID subunit 5 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TAF5 PE=1
SV=1
Length = 798
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSN 296
K + GH VY F +Y+++GS+D+ V++WSM+T L S +GH + D++ S
Sbjct: 519 KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPL 578
Query: 297 NALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
A+AS+D R+W P+ + GH V ++F P V+ + S D TCR+
Sbjct: 579 GHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVF---TGSSDKTCRM 635
Query: 357 WDARYSQFSPRIYI----PRPSDAVA--GRNMAPSSS------------------AGPQS 392
WD S R+++ P S AV GR ++ S G
Sbjct: 636 WDVSTGD-SVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGK 694
Query: 393 HQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPN 433
+ I+ +++ G V ++G +D RVW+ K T+ S +P+
Sbjct: 695 NAIYSLSYSKEGNVLISGGADHTVRVWDLKKATTEPSAEPD 735
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 87/224 (38%), Gaps = 46/224 (20%)
Query: 215 SIRAACYAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMET 274
+I+ +A PS + QN + + C F R G D +KIWS++
Sbjct: 444 AIKLDNLQLALPSVCMYTFQNTNK------DMSCLDFSDDCRIAAAGFQDSYIKIWSLDG 497
Query: 275 AYCLA--------------SCR---GHEGDITDLAVSSNNALVASASNDCIIRVWRLPDG 317
+ +C+ GH G + + S +N + S S D +R+W +
Sbjct: 498 SSLNNPNIALNNNDKDEDPTCKTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTH 557
Query: 318 LPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAV 377
+ +GH V ++FSP + ++S D T R+W + IY P
Sbjct: 558 TALVSYKGHNHPVWDVSFSPLG---HYFATASHDQTARLWSCDH------IY---PLRIF 605
Query: 378 AGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNA 421
AG + + C +F+ NG TGSSD R+W+
Sbjct: 606 AG-----------HLNDVDCVSFHPNGCYVFTGSSDKTCRMWDV 638
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 51/127 (40%), Gaps = 13/127 (10%)
Query: 219 ACYAIAKPSTMVQKM------QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSM 272
CY S +M +++ GH V GR++ TGS+D ++ +W +
Sbjct: 621 GCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDI 680
Query: 273 ETAYCLASCRGH-EGDITDLAVSSNNALVASASNDCIIRVWRL------PDGLPISVLRG 325
T L RGH + I L+ S ++ S D +RVW L P P G
Sbjct: 681 GTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLKKATTEPSAEPDEPFIG 740
Query: 326 HTAAVTA 332
+ VTA
Sbjct: 741 YLGDVTA 747
>sp|O13282|TAF5_SCHPO Transcription initiation factor TFIID subunit 5
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=taf5 PE=1 SV=1
Length = 643
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 114/250 (45%), Gaps = 29/250 (11%)
Query: 203 IGGGFTRHH-RAPSIRAACYAIAKPSTMVQKMQNIKRVRGHRNAVYCAIFDRSGRYVITG 261
I GF + R SI+A ++ K ST V+ R+ H VY F +Y+++
Sbjct: 339 IACGFQESYIRLWSIKADKKSLPK-STSVEDSDGSVRLLSHSGPVYGTTFSPDNKYLLSC 397
Query: 262 SDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNALVASASNDCIIRVWRLPDGLPIS 321
S+D ++WS++T L + +GH G + D+A A+AS+D ++W P+
Sbjct: 398 SEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLR 457
Query: 322 VLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIY--IPRPSDAVA- 378
V GH + V + F P V L+ S D TCR+WD S R++ +P AVA
Sbjct: 458 VFAGHLSDVDCVTFHPNSAYV---LTGSSDKTCRLWDVHRGH-SVRVFNGHTQPVTAVAI 513
Query: 379 ---GRNMAPSSSAG---------------PQSHQ--IFCCAFNANGTVFVTGSSDTLARV 418
G MA + S G + H+ I+ +F+ TV V+G SD R
Sbjct: 514 APDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRA 573
Query: 419 WNACKPNTDD 428
W+ K N ++
Sbjct: 574 WDVFKTNYNN 583
>sp|Q8N136|WDR69_HUMAN Outer row dynein assembly protein 16 homolog OS=Homo sapiens
GN=WDR69 PE=1 SV=1
Length = 415
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 156/378 (41%), Gaps = 89/378 (23%)
Query: 234 QNIKRVRGHRNAVYCAIFDR-SGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLA 292
+ + + GHRN VY F+ G + TGS D+ K+WS+ET C + RGH +I L+
Sbjct: 125 EELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLS 184
Query: 293 VSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
+ + LVA+ S D ++W + +G + LRGH+A + +++F+ S ++++ S D
Sbjct: 185 FNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNT---SGDRIITGSFDH 241
Query: 353 TCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSS 412
T +WDA R + + G SS+ +FN + ++ +TGS
Sbjct: 242 TVVVWDAD---------TGRKVNILIGHCAEISSA-----------SFNWDCSLILTGSM 281
Query: 413 DTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTP 472
D ++W+A + L+GH++++ + S F D T
Sbjct: 282 DKTCKLWDATNGKC---------VATLTGHDDEI---------LDSCF--------DYTG 315
Query: 473 KFKNSWFCHDNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVPPPPMPPQPPRGGP 532
K I T S DG+A I+ +R+ K G
Sbjct: 316 KL---------IATASADGTARIFSAATRKCIAKL-------------------EGHEGE 347
Query: 533 RQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHP 592
+I P+G +++ S D RI W+A G + L GHT+ + +
Sbjct: 348 ISKISFNPQGNHLLTGSSDKT--------ARI--WDAQTGQCLQVLEGHTDEIFSCAFN- 396
Query: 593 FNPRIAMSAGYDGKTIVW 610
+ I ++ D +W
Sbjct: 397 YKGNIVITGSKDNTCRIW 414
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 89/232 (38%), Gaps = 65/232 (28%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMET--------------- 274
+Q + + +RGH + F+ SG +ITGS D V +W +T
Sbjct: 206 IQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEIS 265
Query: 275 ---------------------------AYCLASCRGHEGDITDLAVSSNNALVASASNDC 307
C+A+ GH+ +I D L+A+AS D
Sbjct: 266 SASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADG 325
Query: 308 IIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPR 367
R++ I+ L GH ++ I+F+P+ LL+ S D T RIWDA+ Q
Sbjct: 326 TARIFSAATRKCIAKLEGHEGEISKISFNPQGN---HLLTGSSDKTARIWDAQTGQCLQV 382
Query: 368 IYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVW 419
+ + +IF CAFN G + +TGS D R+W
Sbjct: 383 LE--------------------GHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/402 (19%), Positives = 145/402 (36%), Gaps = 99/402 (24%)
Query: 271 SMETAYCLASCRGHEGDITDLAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAV 330
S T Y + H +T++A++ + + + S D ++W G ++ L GH V
Sbjct: 78 SNHTFYLFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVV 137
Query: 331 TAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGP 390
AIAF+ G ++ + S D TC++W + + Y +
Sbjct: 138 YAIAFNNPYGD--KIATGSFDKTCKLWSVE----TGKCY----------------HTFRG 175
Query: 391 QSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQ 450
+ +I C +FN T+ TGS DT A++W+ Q E+ L GH ++ +
Sbjct: 176 HTAEIVCLSFNPQSTLVATGSMDTTAKLWDI---------QNGEEVYTLRGHSAEIISLS 226
Query: 451 FSGCAVASRFSLADSSKEDSTPKFKNSWFCHDNIVTCSRDGSAIIWIPRSRRSHPKAARW 510
F+ D I+T S D + ++W
Sbjct: 227 FNTSG--------------------------DRIITGSFDHTVVVW-------------- 246
Query: 511 TQAYHLKVPPPPMPPQPPRGGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAA 570
G ++ ++ ++ D +L MD +W+A
Sbjct: 247 ---------------DADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDAT 291
Query: 571 DGSLVHSLTGHTESTYVLD-VHPFNPRIAMSAGYDGKTIVWDI--------WEGIPIRIY 621
+G V +LTGH + +LD + ++ +A DG ++ EG I
Sbjct: 292 NGKCVATLTGHDDE--ILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEIS 349
Query: 622 EISRFRDGASIIL--SDDVGQLYILNTGQGESQKDAKYDQFF 661
+IS G ++ SD +++ TGQ + D+ F
Sbjct: 350 KISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIF 391
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSS 295
I ++ GH + F+ G +++TGS D+ +IW +T CL GH +I A +
Sbjct: 338 IAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNY 397
Query: 296 NNALVASASNDCIIRVWR 313
+V + S D R+WR
Sbjct: 398 KGNIVITGSKDNTCRIWR 415
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 156/393 (39%), Gaps = 60/393 (15%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSN 296
+ + GH ++V F G+ V +GSDD+ +KIW + + GH G + +A S +
Sbjct: 835 QTLEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPD 894
Query: 297 NALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
VAS S+D I++W G L GH V ++AFSP V S SDD T +I
Sbjct: 895 RERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRV---ASGSDDHTIKI 951
Query: 357 WDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLA 416
WDA + + + S+ + AF+ +G +GS D
Sbjct: 952 WDA--------------ASGTCTQTLEGHGSS------VLSVAFSPDGQRVASGSGDKTI 991
Query: 417 RVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS--GCAVASRFSLADSSKEDSTPKF 474
++W+ + L GH V V FS G VA S +D T K
Sbjct: 992 KIWDTASGTCTQT---------LEGHGGSVWSVAFSPDGQRVA-------SGSDDKTIKI 1035
Query: 475 KNSWFCHDNIVTCSRDG-----SAIIWIPRSRRSHPKAARWTQAYHLKVPPPPMPPQPPR 529
W T + +G ++++ P +R A + + +K+
Sbjct: 1036 ---WDTASGTCTQTLEGHGGWVQSVVFSPDGQR----VASGSDDHTIKI------WDAVS 1082
Query: 530 GGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLD 589
G Q + V + +S D + V + +D I +W+AA G+ +L GH + +
Sbjct: 1083 GTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVA 1142
Query: 590 VHPFNPRIAMSAGYDGKTIVWDIWEGIPIRIYE 622
P R+A S DG +WD G + E
Sbjct: 1143 FSPDGQRVA-SGSIDGTIKIWDAASGTCTQTLE 1174
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 91/216 (42%), Gaps = 32/216 (14%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSN 296
+ + GH +V+ F G+ V +GSDD+ +KIW + C + GH G + + S +
Sbjct: 1003 QTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPD 1062
Query: 297 NALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
VAS S+D I++W G L GH +V ++AFSP V S S DGT +I
Sbjct: 1063 GQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRV---ASGSIDGTIKI 1119
Query: 357 WDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLA 416
W DA +G G H + AF+ +G +GS D
Sbjct: 1120 W-----------------DAASGTCTQTLEGHGGWVHSV---AFSPDGQRVASGSIDGTI 1159
Query: 417 RVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS 452
++W+A + L GH V V FS
Sbjct: 1160 KIWDAASGTCTQT---------LEGHGGWVQSVAFS 1186
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 151/418 (36%), Gaps = 97/418 (23%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSN 296
+ + GH ++V F G+ V +GS D+ +KIW + C + GH G + +A S +
Sbjct: 961 QTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPD 1020
Query: 297 NALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
VAS S+D I++W G L GH V ++ FSP V S SDD T +I
Sbjct: 1021 GQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRV---ASGSDDHTIKI 1077
Query: 357 WDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLA 416
W DAV+G G ++ AF+ +G +GS D
Sbjct: 1078 W-----------------DAVSGTCTQTLEGHG---DSVWSVAFSPDGQRVASGSIDGTI 1117
Query: 417 RVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS--GCAVASRFSLADSSKEDSTPKF 474
++W+A + L GH V+ V FS G VAS
Sbjct: 1118 KIWDAASGTCTQT---------LEGHGGWVHSVAFSPDGQRVASG--------------- 1153
Query: 475 KNSWFCHDNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVPPPPMPPQPPRGGPRQ 534
S DG+ IW AA T L+ GG Q
Sbjct: 1154 -------------SIDGTIKIW---------DAASGTCTQTLE----------GHGGWVQ 1181
Query: 535 RILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFN 594
+ +P D + V + D I +W+ A G+ +L GH + P
Sbjct: 1182 SVAFSP----------DGQRVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDG 1231
Query: 595 PRIAMSAGYDGKTIVWDIWEGIPIRIYEISRFRDGASIILSDDVGQLYILNTGQGESQ 652
R+A S D +WD G + + + LS D YI NT G Q
Sbjct: 1232 QRVA-SGSSDNTIKIWDTASGTCTQTLNVG----STATCLSFDYTNAYI-NTNIGRIQ 1283
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 133/349 (38%), Gaps = 52/349 (14%)
Query: 277 CLASCRGHEGDITDLAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFS 336
C + GH + +A S++ VAS S+D I++W G L GH +V ++AFS
Sbjct: 833 CTQTLEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFS 892
Query: 337 PRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIF 396
P V S SDD T +IWDA + + + GR +
Sbjct: 893 PDRERV---ASGSDDKTIKIWDAASGTCTQTL------EGHGGR--------------VQ 929
Query: 397 CCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS--GC 454
AF+ +G +GS D ++W+A + L GH + V V FS G
Sbjct: 930 SVAFSPDGQRVASGSDDHTIKIWDAASGTCTQT---------LEGHGSSVLSVAFSPDGQ 980
Query: 455 AVASRFSLADSSKEDSTPKFKNSWFCHDNIVTCSRDG-SAIIWIPRSRRSHPKAARWTQA 513
VA S D T K W T + +G +W + A +
Sbjct: 981 RVA-------SGSGDKTIKI---WDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDD 1030
Query: 514 YHLKVPPPPMPPQPPRGGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGS 573
+K+ G Q + V +V+S D + V + D I +W+A G+
Sbjct: 1031 KTIKI------WDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGT 1084
Query: 574 LVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIRIYE 622
+L GH +S + + P R+A S DG +WD G + E
Sbjct: 1085 CTQTLEGHGDSVWSVAFSPDGQRVA-SGSIDGTIKIWDAASGTCTQTLE 1132
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 9/115 (7%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V + +S D + V + D I +W+AA G+ +L GH S + P R+A +G
Sbjct: 928 VQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSG 987
Query: 603 YDGKTIVWDIWEGIPIR--------IYEISRFRDGASIILSDDVGQLYILNTGQG 649
D +WD G + ++ ++ DG + D + I +T G
Sbjct: 988 -DKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASG 1041
>sp|Q9FLX9|NLE1_ARATH Notchless protein homolog OS=Arabidopsis thaliana GN=NLE1 PE=2 SV=1
Length = 473
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 162/413 (39%), Gaps = 81/413 (19%)
Query: 222 AIAKPSTMVQKMQNIKRVR----------GHRNAVYCAIFDRSGRYVITGSDDRLVKIWS 271
++ K T+V + Q + R+R GH AV C F G+ + +GS D V++W
Sbjct: 78 SVEKVLTIVYQQQAVFRIRPVNRCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWD 137
Query: 272 METAYCLASCRGHEGDITDLAVSSNNALVASASNDCIIRVWRLPDG-LPISVLRGHTAAV 330
+ T L +C+GH+ + +A S + + S S I W G L S L GH +
Sbjct: 138 LYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWI 197
Query: 331 TAIAFSPRPGS--VYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSA 388
T I++ P S + ++SS DG RIWD I + + ++G +A
Sbjct: 198 TGISWEPVHLSSPCRRFVTSSKDGDARIWD---------ITLKKSIICLSGHTLA----- 243
Query: 389 GPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNY 448
+ C + +G ++ TGS D ++W + I L GH + +N
Sbjct: 244 ------VTCVKWGGDGIIY-TGSQDCTIKMWETTQGKL---------IRELKGHGHWINS 287
Query: 449 VQFSGCAV--------ASRFSLADSSKEDSTPKF-KNSWFCHDNIVTCSRDGSAIIWIPR 499
+ S V R + K+ + ++ K + +V+ S D + +W P
Sbjct: 288 LALSTEYVLRTGAFDHTGRQYPPNEEKQKALERYNKTKGDSPERLVSGSDDFTMFLWEPS 347
Query: 500 SRRSHPKAARWTQAYHLKVPPPPMPPQPPRGGPRQRILPTPRGVNMIVWSLDNRFVLAAI 559
+ P++R+ + VN + +S D +++ +A
Sbjct: 348 VSKQ----------------------------PKKRLTGHQQLVNHVYFSPDGKWIASAS 379
Query: 560 MDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDI 612
D + +WN G V GH Y + + R+ +S D +W+I
Sbjct: 380 FDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSA-DSRLLLSGSKDSTLKIWEI 431
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAV 293
Q KR+ GH+ V F G+++ + S D+ V++W+ T + RGH G + ++
Sbjct: 351 QPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSW 410
Query: 294 SSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
S+++ L+ S S D +++W + L GH V A+ +SP V +S D
Sbjct: 411 SADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKV---VSGGKDRV 467
Query: 354 CRIW 357
++W
Sbjct: 468 LKLW 471
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 24/165 (14%)
Query: 258 VITGSDDRLVKIWSMETA-YCLASCRGHEGDITDLAVSSNNALVASASNDCIIRVWRLPD 316
+++GSDD + +W + GH+ + + S + +ASAS D +R+W
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGIT 391
Query: 317 GLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDA 376
G ++V RGH V +++S LLS S D T +IW+ R + +P +D
Sbjct: 392 GQFVTVFRGHVGPVYQVSWS---ADSRLLLSGSKDSTLKIWEIRTKKLKQD--LPGHAD- 445
Query: 377 VAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNA 421
++F ++ +G V+G D + ++W
Sbjct: 446 -----------------EVFAVDWSPDGEKVVSGGKDRVLKLWKG 473
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 37/80 (46%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAV 293
Q + RGH VY + R +++GS D +KIW + T GH ++ +
Sbjct: 393 QFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDW 452
Query: 294 SSNNALVASASNDCIIRVWR 313
S + V S D ++++W+
Sbjct: 453 SPDGEKVVSGGKDRVLKLWK 472
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 109/254 (42%), Gaps = 39/254 (15%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
V + + GH + V F G + +GSDD V++W + A A GH +
Sbjct: 488 VASGDELHTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVL 547
Query: 290 DLAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D+A S + ++VAS S D R+W + G +VL+GHT V A+AFSP GS+ + S S
Sbjct: 548 DIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPD-GSM--VASGS 604
Query: 350 DDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSS----------------AGPQSH 393
DGT R+WD + R + P++ V +P S +G H
Sbjct: 605 RDGTIRLWDVATGK--ERDVLQAPAENVVSLAFSPDGSMLVHGSDSTVHLWDVASGEALH 662
Query: 394 Q-------IFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDV 446
+ AF+ +G + +GS D R+W+ E L GH V
Sbjct: 663 TFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAA---------QEEHTTLEGHTEPV 713
Query: 447 NYVQF--SGCAVAS 458
+ V F G +AS
Sbjct: 714 HSVAFHPEGTTLAS 727
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 243 RNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNALVAS 302
R AV A F G + GS D+L+ +W + + L + GH + +A S + AL+AS
Sbjct: 460 REAVAVA-FSPGGSLLAGGSGDKLIHVWDVASGDELHTLEGHTDWVRAVAFSPDGALLAS 518
Query: 303 ASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYS 362
S+D +R+W + +V GHT V IAFSP GS+ + S S DGT R+W
Sbjct: 519 GSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPD-GSM--VASGSRDGTARLW----- 570
Query: 363 QFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNAC 422
+ G A + ++ AF+ +G++ +GS D R+W+
Sbjct: 571 ------------NVATGTEHAVLKG---HTDYVYAVAFSPDGSMVASGSRDGTIRLWDVA 615
Query: 423 KPNTDDSDQPNHEIDVLSGHENDVNYVQFS 452
E DVL +V + FS
Sbjct: 616 T---------GKERDVLQAPAENVVSLAFS 636
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 24/181 (13%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNA 298
++GH + VY F G V +GS D +++W + T + ++ LA S + +
Sbjct: 581 LKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSPDGS 640
Query: 299 LVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
++ S D + +W + G + GHT V A+AFSP G++ L S SDD T R+WD
Sbjct: 641 MLVHGS-DSTVHLWDVASGEALHTFEGHTDWVRAVAFSPD-GAL--LASGSDDRTIRLWD 696
Query: 359 ARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARV 418
VA + ++ + + AF+ GT + S D R+
Sbjct: 697 ------------------VAAQEE--HTTLEGHTEPVHSVAFHPEGTTLASASEDGTIRI 736
Query: 419 W 419
W
Sbjct: 737 W 737
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 128/327 (39%), Gaps = 99/327 (30%)
Query: 291 LAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSD 350
+A S +L+A S D +I VW + G + L GHT V A+AFSP G++ L S SD
Sbjct: 465 VAFSPGGSLLAGGSGDKLIHVWDVASGDELHTLEGHTDWVRAVAFSPD-GAL--LASGSD 521
Query: 351 DGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTG 410
D T R+WD ++ AV + +H + AF+ +G++ +G
Sbjct: 522 DATVRLWDVAAAE----------ERAVFEGH----------THYVLDIAFSPDGSMVASG 561
Query: 411 SSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS--GCAVASRFSLADSSKE 468
S D AR+WN E VL GH + V V FS G VAS
Sbjct: 562 SRDGTARLWNVAT---------GTEHAVLKGHTDYVYAVAFSPDGSMVAS---------- 602
Query: 469 DSTPKFKNSWFCHDNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVPPPPMPPQPP 528
SRDG+ +W +
Sbjct: 603 ------------------GSRDGTIRLWDVAT---------------------------- 616
Query: 529 RGGPRQRILPTP-RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYV 587
G + +L P V + +S D ++ D + +W+ A G +H+ GHT+
Sbjct: 617 --GKERDVLQAPAENVVSLAFSPDGSMLVHG-SDSTVHLWDVASGEALHTFEGHTDWVRA 673
Query: 588 LDVHPFNPRIAMSA-GYDGKTI-VWDI 612
+ F+P A+ A G D +TI +WD+
Sbjct: 674 VA---FSPDGALLASGSDDRTIRLWDV 697
Score = 35.4 bits (80), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 17/146 (11%)
Query: 535 RILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFN 594
RIL T R + +S + D I VW+ A G +H+L GHT+ + F+
Sbjct: 454 RILTTDREAVAVAFSPGGSLLAGGSGDKLIHVWDVASGDELHTLEGHTDWVRAVA---FS 510
Query: 595 PRIAMSA-GYDGKTI-VWD--------IWEGIPIRIYEISRFRDGASIILS---DDVGQL 641
P A+ A G D T+ +WD ++EG + +I+ DG S++ S D +L
Sbjct: 511 PDGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDG-SMVASGSRDGTARL 569
Query: 642 YILNTGQGESQKDAKYDQFFLGDYRP 667
+ + TG + D + + P
Sbjct: 570 WNVATGTEHAVLKGHTDYVYAVAFSP 595
Score = 34.3 bits (77), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 546 IVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDG 605
I +S D V + D +WN A G+ L GHT+ Y + P +A S DG
Sbjct: 549 IAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVA-SGSRDG 607
Query: 606 KTIVWDIWEG 615
+WD+ G
Sbjct: 608 TIRLWDVATG 617
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 110/486 (22%), Positives = 194/486 (39%), Gaps = 77/486 (15%)
Query: 223 IAKPSTMVQ---KMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLA 279
+A +T+ Q +MQ R+ GH++ V R G+ + +GS D+ +K+WS +
Sbjct: 1049 LATVTTLQQALFEMQERNRLEGHKDGVISISISRDGQTIASGSLDKTIKLWSRD-GRLFR 1107
Query: 280 SCRGHEGDITDLAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRP 339
+ GHE + ++ S + +AS +D I++W+ DG + + GH V + FSP
Sbjct: 1108 TLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDG 1167
Query: 340 GSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCA 399
+ L S+S D + ++WD Q + SAG +
Sbjct: 1168 KN---LASASSDHSIKLWDTTSGQLLMTL---------------TGHSAG-----VITVR 1204
Query: 400 FNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS--GCAVA 457
F+ +G GS D ++W+ Q + L+GH++ VN + FS G +A
Sbjct: 1205 FSPDGQTIAAGSEDKTVKLWH---------RQDGKLLKTLNGHQDWVNSLSFSPDGKTLA 1255
Query: 458 SR--------FSLADSSKEDSTPKFKNS-W---FCHDN--IVTCSRDGSAIIWIPRSRRS 503
S + +AD + +S W F D I + SRD + +W
Sbjct: 1256 SASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLWNRHGIEL 1315
Query: 504 HPKAARWTQAYHLKVPPPPMPP------------QPPRGGPRQRILPTPRGVNMIVWSLD 551
Y + P Q P P + +L GV + + D
Sbjct: 1316 ETFTGHSGGVYAVNFLPDSNIIASASLDNTIRLWQRPLISPLE-VLAGNSGVYAVSFLHD 1374
Query: 552 NRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWD 611
+ A D I +W++ DGSL+ +L G+ ++ Y + P IA SA D +W
Sbjct: 1375 GSIIATAGADGNIQLWHSQDGSLLKTLPGN-KAIYGISFTPQGDLIA-SANADKTVKIWR 1432
Query: 612 IWEGIPIRIY-----EISRFR---DGASIILSDDVGQLYILNTGQGESQKDAK--YDQFF 661
+ +G ++ E+++ DG ++ + + + N G+ +K K D+ F
Sbjct: 1433 VRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVF 1492
Query: 662 LGDYRP 667
+ P
Sbjct: 1493 WVSFSP 1498
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 171/433 (39%), Gaps = 63/433 (14%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSS 295
+ + GH +AVY F G+ + +G D+ +K+W L + GHE + ++ S
Sbjct: 1106 FRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSP 1165
Query: 296 NNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
+ +ASAS+D I++W G + L GH+A V + FSP ++ + S+D T +
Sbjct: 1166 DGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIA---AGSEDKTVK 1222
Query: 356 IWDARYSQFSPRI-----YIPRPSDAVAGRNMAPSS-----------------SAGPQSH 393
+W + + + ++ S + G+ +A +S + +
Sbjct: 1223 LWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLVKTLKGHND 1282
Query: 394 QIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQF-S 452
++ F+++G + S D ++WN + E++ +GH V V F
Sbjct: 1283 SVWDVNFSSDGKAIASASRDNTIKLWN----------RHGIELETFTGHSGGVYAVNFLP 1332
Query: 453 GCAVASRFSLADSSKEDSTPKFK-------NSW-----FCHDN--IVTCSRDGSAIIWIP 498
+ + SL ++ + P NS F HD I T DG+ +W
Sbjct: 1333 DSNIIASASLDNTIRLWQRPLISPLEVLAGNSGVYAVSFLHDGSIIATAGADGNIQLWHS 1392
Query: 499 RSRRSHPKAARWTQAYHLKVPPPPMPPQPPRGGPRQRI--------LPTPRG----VNMI 546
+ Y + P +I L T G VN +
Sbjct: 1393 QDGSLLKTLPGNKAIYGISFTPQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNKV 1452
Query: 547 VWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGK 606
+S D + + +A D + +WN +DG +L GHT+ + + P + +I SA D
Sbjct: 1453 NFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSP-DGKIIASASADKT 1511
Query: 607 TIVWDIWEGIPIR 619
+WD + G I+
Sbjct: 1512 IRLWDSFSGNLIK 1524
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 164/391 (41%), Gaps = 77/391 (19%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSS 295
+K ++GH ++V+ F G+ + + S D +K+W+ L + GH G + +
Sbjct: 1274 VKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLWNRH-GIELETFTGHSGGVYAVNFLP 1332
Query: 296 NNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
++ ++ASAS D IR+W+ P P+ VL G++ V A++F GS+ + ++ DG +
Sbjct: 1333 DSNIIASASLDNTIRLWQRPLISPLEVLAGNS-GVYAVSF-LHDGSI--IATAGADGNIQ 1388
Query: 356 IWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTL 415
+W ++ + P + I+ +F G + + ++D
Sbjct: 1389 LWHSQDGSLLKTL---------------------PGNKAIYGISFTPQGDLIASANADKT 1427
Query: 416 ARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTP--- 472
++W + + L GH+N+VN V FS +LA +S++++
Sbjct: 1428 VKIWRV---------RDGKALKTLIGHDNEVNKVNFS----PDGKTLASASRDNTVKLWN 1474
Query: 473 ----KFKNSWFCH-DNI--VTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVPPPPMPP 525
KFK + H D + V+ S DG I + S K R ++
Sbjct: 1475 VSDGKFKKTLKGHTDEVFWVSFSPDGKII-----ASASADKTIRLWDSF----------- 1518
Query: 526 QPPRGGPRQRILPTPRGVNMIVWSL----DNRFVLAAIMDCRICVWNAADGSLVHSLTGH 581
G + LP N +V+S+ D + + D + +W + DG L+H+ +GH
Sbjct: 1519 ----SGNLIKSLPAH---NDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGHLLHTFSGH 1571
Query: 582 TESTYVLDVHPFNPRIAMSAGYDGKTIVWDI 612
+ Y P + R SA D +W I
Sbjct: 1572 SNVVYSSSFSP-DGRYIASASEDKTVKIWQI 1601
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 81/183 (44%), Gaps = 24/183 (13%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSN 296
K ++GH + V+ F G+ + + S D+ +++W + + S H + + + +
Sbjct: 1482 KTLKGHTDEVFWVSFSPDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPD 1541
Query: 297 NALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
+++AS S D +++WR DG + GH+ V + +FSP + S+S+D T +I
Sbjct: 1542 GSMLASTSADKTVKLWRSHDGHLLHTFSGHSNVVYSSSFSPDGRYIA---SASEDKTVKI 1598
Query: 357 WDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLA 416
W Q + P AG + F+ +G ++GS DT
Sbjct: 1599 W-----QIDGHLL-----------TTLPQHQAG-----VMSAIFSPDGKTLISGSLDTTT 1637
Query: 417 RVW 419
++W
Sbjct: 1638 KIW 1640
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSS 295
IK + H + VY F+ G + + S D+ VK+W + L + GH + + S
Sbjct: 1523 IKSLPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGHLLHTFSGHSNVVYSSSFSP 1582
Query: 296 NNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
+ +ASAS D +++W++ DG ++ L H A V + FSP + L+S S D T +
Sbjct: 1583 DGRYIASASEDKTVKIWQI-DGHLLTTLPQHQAGVMSAIFSPDGKT---LISGSLDTTTK 1638
Query: 356 IW 357
IW
Sbjct: 1639 IW 1640
>sp|Q4R8E7|WDR69_MACFA Outer row dynein assembly protein 16 homolog OS=Macaca fascicularis
GN=WDR69 PE=2 SV=1
Length = 415
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 150/378 (39%), Gaps = 89/378 (23%)
Query: 234 QNIKRVRGHRNAVYCAIFDR-SGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLA 292
+ + + GHRN VY F+ G TGS D+ K+WS+ET C + RGH +I L+
Sbjct: 125 EELNTLEGHRNVVYAIAFNNPYGDKTATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLS 184
Query: 293 VSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
+ + LVA+ S D ++W + +G + LRGH+A + +++F+ S ++++ S D
Sbjct: 185 FNPQSTLVATGSMDTTAKLWNIQNGEEVCTLRGHSAEIISLSFNT---SGDRIITGSFDH 241
Query: 353 TCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSS 412
T +WDA D N+ A +I FN + ++ +TGS
Sbjct: 242 TVVVWDA---------------DTGGKVNILIGHCA-----EISSALFNWDCSLILTGSM 281
Query: 413 DTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTP 472
D +W+A + L+GH++++ + S F D T
Sbjct: 282 DKTCMLWDATNGKC---------VATLTGHDDEI---------LDSCF--------DYTG 315
Query: 473 KFKNSWFCHDNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVPPPPMPPQPPRGGP 532
K I T S DG+A I+ +R+ K + + ++ PQ R
Sbjct: 316 KL---------IATASADGTARIFSAATRKCIAKL----EGHEGEISKISFNPQGNR--- 359
Query: 533 RQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHP 592
+L D +W+A G + L GHT+ + +
Sbjct: 360 ----------------------LLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCTFN- 396
Query: 593 FNPRIAMSAGYDGKTIVW 610
+ I ++ D +W
Sbjct: 397 YKGNIVITGSKDNTCRIW 414
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 89/232 (38%), Gaps = 65/232 (28%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMET--------------- 274
+Q + + +RGH + F+ SG +ITGS D V +W +T
Sbjct: 206 IQNGEEVCTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGGKVNILIGHCAEIS 265
Query: 275 ---------------------------AYCLASCRGHEGDITDLAVSSNNALVASASNDC 307
C+A+ GH+ +I D L+A+AS D
Sbjct: 266 SALFNWDCSLILTGSMDKTCMLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADG 325
Query: 308 IIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPR 367
R++ I+ L GH ++ I+F+P+ +LL+ S D T RIWDA+ Q
Sbjct: 326 TARIFSAATRKCIAKLEGHEGEISKISFNPQGN---RLLTGSSDKTARIWDAQTGQCLQV 382
Query: 368 IYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVW 419
+ + +IF C FN G + +TGS D R+W
Sbjct: 383 LE--------------------GHTDEIFSCTFNYKGNIVITGSKDNTCRIW 414
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 82/402 (20%), Positives = 146/402 (36%), Gaps = 99/402 (24%)
Query: 271 SMETAYCLASCRGHEGDITDLAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAV 330
S T Y + H +T++A++ + + + S D ++W G ++ L GH V
Sbjct: 78 SNHTFYLFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVV 137
Query: 331 TAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGP 390
AIAF+ G + + S D TC++W + + Y +
Sbjct: 138 YAIAFNNPYGD--KTATGSFDKTCKLWSVE----TGKCY----------------HTFRG 175
Query: 391 QSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQ 450
+ +I C +FN T+ TGS DT A++WN Q E+ L GH ++ +
Sbjct: 176 HTAEIVCLSFNPQSTLVATGSMDTTAKLWNI---------QNGEEVCTLRGHSAEIISLS 226
Query: 451 FSGCAVASRFSLADSSKEDSTPKFKNSWFCHDNIVTCSRDGSAIIWIPRSRRSHPKAARW 510
F+ D I+T S D + ++W
Sbjct: 227 FNTSG--------------------------DRIITGSFDHTVVVW-------------- 246
Query: 511 TQAYHLKVPPPPMPPQPPRGGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAA 570
GG ++ ++ +++ D +L MD +W+A
Sbjct: 247 ---------------DADTGGKVNILIGHCAEISSALFNWDCSLILTGSMDKTCMLWDAT 291
Query: 571 DGSLVHSLTGHTESTYVLD-VHPFNPRIAMSAGYDGKTIVWDI--------WEGIPIRIY 621
+G V +LTGH + +LD + ++ +A DG ++ EG I
Sbjct: 292 NGKCVATLTGHDDE--ILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEIS 349
Query: 622 EISRFRDGASIIL--SDDVGQLYILNTGQGESQKDAKYDQFF 661
+IS G ++ SD +++ TGQ + D+ F
Sbjct: 350 KISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIF 391
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSS 295
I ++ GH + F+ G ++TGS D+ +IW +T CL GH +I +
Sbjct: 338 IAKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCTFNY 397
Query: 296 NNALVASASNDCIIRVWR 313
+V + S D R+WR
Sbjct: 398 KGNIVITGSKDNTCRIWR 415
>sp|Q3Y8L7|WDR69_CHLRE Outer row dynein assembly protein 16 OS=Chlamydomonas reinhardtii
GN=ODA16 PE=1 SV=1
Length = 446
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 23/192 (11%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
V+ Q + + GHR V F+ +G V++GS D ++W + + CL+ +GH ++
Sbjct: 250 VRTGQCVHVLSGHRGEVSSTQFNYAGTLVVSGSIDCTSRLWDVRSGRCLSVKQGHTDEVL 309
Query: 290 DLAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
D+A + + SAS D R++ G+ L GH ++ +AF+P+ +L+++S
Sbjct: 310 DVAFDAAGTKMVSASADGSARLYHTLTGVCQHTLVGHEGEISKVAFNPQGT---RLITAS 366
Query: 350 DDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVT 409
D TCR+WD + + G + +IF CAFN G +T
Sbjct: 367 SDKTCRLWDCDTGE---------CLQVLEG-----------HTDEIFSCAFNYEGDFIIT 406
Query: 410 GSSDTLARVWNA 421
GS D R+W A
Sbjct: 407 GSKDNTCRIWKA 418
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 100/237 (42%), Gaps = 36/237 (15%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNA 298
++GH+ + C F+ + TGS D K+W +ET A+ GH +I L ++
Sbjct: 175 LKGHQTEIVCLSFNPQSTIIATGSMDNTAKLWDVETGQERATLAGHRAEIVSLGFNTGGD 234
Query: 299 LVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
L+ + S D R+W + G + VL GH V++ F+ G++ ++S S D T R+WD
Sbjct: 235 LIVTGSFDHDSRLWDVRTGQCVHVLSGHRGEVSSTQFN-YAGTL--VVSGSIDCTSRLWD 291
Query: 359 AR------YSQFSPRIYIPRPSDAVAGRNMAPSSSAGP-----------------QSHQI 395
R Q + DA AG M +S+ G +I
Sbjct: 292 VRSGRCLSVKQGHTDEVLDVAFDA-AGTKMVSASADGSARLYHTLTGVCQHTLVGHEGEI 350
Query: 396 FCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS 452
AFN GT +T SSD R+W+ + VL GH +++ F+
Sbjct: 351 SKVAFNPQGTRLITASSDKTCRLWDC---------DTGECLQVLEGHTDEIFSCAFN 398
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 33/234 (14%)
Query: 234 QNIKRVRGHRNAVYCAIFDR-SGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLA 292
+ + + GH+N VY F+ G ++TGS D+ K+W T + +GH+ +I L+
Sbjct: 127 EEVFTLEGHKNVVYAIAFNNPYGDKIVTGSFDKTCKLWDAYTGQLYYTLKGHQTEIVCLS 186
Query: 293 VSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
+ + ++A+ S D ++W + G + L GH A + ++ F+ G + +++ S D
Sbjct: 187 FNPQSTIIATGSMDNTAKLWDVETGQERATLAGHRAEIVSLGFNT-GGDL--IVTGSFDH 243
Query: 353 TCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSS 412
R+WD R Q ++G SS+ FN GT+ V+GS
Sbjct: 244 DSRLWDVRTGQ---------CVHVLSGHRGEVSST-----------QFNYAGTLVVSGSI 283
Query: 413 DTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSS 466
D +R+W+ + + V GH ++V V F + AD S
Sbjct: 284 DCTSRLWDV---------RSGRCLSVKQGHTDEVLDVAFDAAGTKMVSASADGS 328
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 143/370 (38%), Gaps = 82/370 (22%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSS 295
K +R H + F++SG ITGS DR K+W+ T + + GH+ + A++
Sbjct: 87 FKVLRAHILPLTNCAFNKSGDRFITGSYDRTCKVWNTFTGEEVFTLEGHKNVV--YAIAF 144
Query: 296 NNAL---VASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
NN + + S D ++W G L+GH + ++F+P+ + + S D
Sbjct: 145 NNPYGDKIVTGSFDKTCKLWDAYTGQLYYTLKGHQTEIVCLSFNPQSTII---ATGSMDN 201
Query: 353 TCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSS 412
T ++WD Q ++ AG ++ +I FN G + VTGS
Sbjct: 202 TAKLWDVETGQ-------------------ERATLAGHRA-EIVSLGFNTGGDLIVTGSF 241
Query: 413 DTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQF--SGCAVAS------------ 458
D +R+W+ + + VLSGH +V+ QF +G V S
Sbjct: 242 DHDSRLWDV---------RTGQCVHVLSGHRGEVSSTQFNYAGTLVVSGSIDCTSRLWDV 292
Query: 459 RFSLADSSKEDSTPKFKNSWF--CHDNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHL 516
R S K+ T + + F +V+ S DGSA R + + T H
Sbjct: 293 RSGRCLSVKQGHTDEVLDVAFDAAGTKMVSASADGSA-----RLYHTLTGVCQHTLVGH- 346
Query: 517 KVPPPPMPPQPPRGGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVH 576
G ++ P+G +I S D CR+ W+ G +
Sbjct: 347 -------------EGEISKVAFNPQGTRLITASSDKT--------CRL--WDCDTGECLQ 383
Query: 577 SLTGHTESTY 586
L GHT+ +
Sbjct: 384 VLEGHTDEIF 393
>sp|Q0P593|WDR69_BOVIN Outer row dynein assembly protein 16 homolog OS=Bos taurus GN=WDR69
PE=2 SV=1
Length = 415
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 116/282 (41%), Gaps = 75/282 (26%)
Query: 234 QNIKRVRGHRNAVYCAIFDR-SGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLA 292
+ + + GHRN VY F+ G + TGS D+ K+WS+ET C + RGH +I L+
Sbjct: 125 EELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLS 184
Query: 293 VSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPR-----PGS------ 341
+ + LVA+ S D ++W + G + L GH+A + +++F+ GS
Sbjct: 185 FNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVT 244
Query: 342 ---------VYQL-------------------LSSSDDGTCRIWDARYSQFSPRIY---- 369
VY L L+ S D TC++WDA + +
Sbjct: 245 VWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDD 304
Query: 370 -IPRPSDAVAGRNMAPSSSAGPQSHQIFCCA-------------------FNANGTVFVT 409
I G+ +A +S+ G + +IF A FN G +T
Sbjct: 305 EILDSCFDYTGKLIATASADG--TARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLT 362
Query: 410 GSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQF 451
GSSD AR+W+A Q + VL GH +++ F
Sbjct: 363 GSSDKTARIWDA---------QTGQCLQVLEGHTDEIFSCAF 395
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 89/232 (38%), Gaps = 65/232 (28%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMET--------------- 274
+Q + + + GH + F+ SG +ITGS D V +W +T
Sbjct: 206 IQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEIS 265
Query: 275 ---------------------------AYCLASCRGHEGDITDLAVSSNNALVASASNDC 307
C+A+ GH+ +I D L+A+AS D
Sbjct: 266 SAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADG 325
Query: 308 IIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPR 367
R++ ++ L GH ++ I+F+P+ +LL+ S D T RIWDA+ Q
Sbjct: 326 TARIFSAATRECVTKLEGHEGEISKISFNPQGN---RLLTGSSDKTARIWDAQTGQCLQV 382
Query: 368 IYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVW 419
+ + +IF CAFN G + +TGS D R+W
Sbjct: 383 LE--------------------GHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 154/415 (37%), Gaps = 99/415 (23%)
Query: 229 MVQKMQN------------IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAY 276
++Q++QN K +R H + ++SG ITGS DR K+W +
Sbjct: 66 LIQRLQNKLGQHSNHKFYLFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGE 125
Query: 277 CLASCRGHEGDITDLAVSSNNAL---VASASNDCIIRVWRLPDGLPISVLRGHTAAVTAI 333
L + GH + A++ NN +A+ S D ++W + G RGHTA + +
Sbjct: 126 ELHTLEGHRNVV--YAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCL 183
Query: 334 AFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSH 393
+F+P+ V + S D T ++WD Q ++ + S
Sbjct: 184 SFNPQSTLV---ATGSMDTTAKLWDI---QSGEEVF-----------------TLTGHSA 220
Query: 394 QIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS- 452
+I +FN +G +TGS D VW A ++ L GH +++ F+
Sbjct: 221 EIISLSFNTSGNRIITGSFDHTVTVWEA---------DTGRKVYTLIGHCAEISSAVFNW 271
Query: 453 GCAVASRFSLADSSK--EDSTPKFKNSWFCHDN-------------IVTCSRDGSAIIWI 497
C++ S+ + K + K + HD+ I T S DG+A I+
Sbjct: 272 DCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFS 331
Query: 498 PRSRRSHPKAARWTQAYHLKVPPPPMPPQPPRGGPRQRILPTPRGVNMIVWSLDNRFVLA 557
+R K G +I P+G ++ S D
Sbjct: 332 AATRECVTKL-------------------EGHEGEISKISFNPQGNRLLTGSSDKT---- 368
Query: 558 AIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPR--IAMSAGYDGKTIVW 610
RI W+A G + L GHT+ + FN + I ++ D +W
Sbjct: 369 ----ARI--WDAQTGQCLQVLEGHTDEIFSC---AFNYKGDIIITGSKDNTCRIW 414
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSS 295
+ ++ GH + F+ G ++TGS D+ +IW +T CL GH +I A +
Sbjct: 338 VTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNY 397
Query: 296 NNALVASASNDCIIRVWR 313
++ + S D R+WR
Sbjct: 398 KGDIIITGSKDNTCRIWR 415
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNA 298
+RGH N VY AIF +G + T S D+ VKIW + CL + GH + D+A S +
Sbjct: 1100 LRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGK 1159
Query: 299 LVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
++ASAS+D +R+W + G + GHT V+++AFSP G V + S S D T RIW+
Sbjct: 1160 ILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSP-DGEV--VASGSQDQTVRIWN 1216
Query: 359 AR 360
+
Sbjct: 1217 VK 1218
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 34/235 (14%)
Query: 240 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNAL 299
RGH N V +F G + + D VK+WS+ C+ + GHE ++ +A +
Sbjct: 681 RGHSNWVRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGET 740
Query: 300 VASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA 359
+ASAS D I++W + DG + L GHT V +AFSP + L SS+ D T ++WD
Sbjct: 741 LASASGDKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNT---LASSAADHTIKLWDV 797
Query: 360 RYSQFSPRI-----YIPRPSDAVAGRNMAPSS-----------------SAGPQSHQIFC 397
+ + ++ + + G+ +A S + ++ ++
Sbjct: 798 SQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYS 857
Query: 398 CAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS 452
A++ + + V+GS D ++W+ Q + I L GH N+V V FS
Sbjct: 858 IAYSPDSKILVSGSGDRTIKLWDC---------QTHICIKTLHGHTNEVCSVAFS 903
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 98/448 (21%), Positives = 167/448 (37%), Gaps = 106/448 (23%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSS 295
+K GH N+VY + + +++GS DR +K+W +T C+ + GH ++ +A S
Sbjct: 845 LKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSP 904
Query: 296 NNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSS-SDDGTC 354
+ +A S D +R+W G + G+T +AFSP Q+L+S S+D T
Sbjct: 905 DGQTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWALPVAFSPDR----QILASGSNDKTV 960
Query: 355 RIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSS----------------AGPQSHQI--- 395
++WD + ++ + +D + G +P S + Q QI
Sbjct: 961 KLWDWQTGKYISS--LEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLE 1018
Query: 396 -----FCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQ 450
+ F+ G + TGS+D ++WN + LS H + +
Sbjct: 1019 HTDWVYAVVFHPQGKIIATGSADCTVKLWNI---------STGQCLKTLSEHSDKI---- 1065
Query: 451 FSGCAVASRFSLADSSKEDSTPKFKNSWFC-----------HDN-------------IVT 486
G A + L S+ D + + W C H N I T
Sbjct: 1066 -LGMAWSPDGQLLASASADQSVRL---WDCCTGRCVGILRGHSNRVYSAIFSPNGEIIAT 1121
Query: 487 CSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVPPPPMPPQPPRGGPRQRILPTPRGVNMI 546
CS D + IW W Q LK + V I
Sbjct: 1122 CSTDQTVKIW------------DWQQGKCLKT-----------------LTGHTNWVFDI 1152
Query: 547 VWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNP--RIAMSAGYD 604
+S D + + +A D + +W+ G H GH T+++ F+P + S D
Sbjct: 1153 AFSPDGKILASASHDQTVRIWDVNTGKCHHICIGH---THLVSSVAFSPDGEVVASGSQD 1209
Query: 605 GKTIVWDIWEGIPIRIYEISRFRDGASI 632
+W++ G ++I R +G +I
Sbjct: 1210 QTVRIWNVKTGECLQILRAKRLYEGMNI 1237
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 34/227 (14%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAV 293
Q + + H + VY +F G+ + TGS D VK+W++ T CL + H I +A
Sbjct: 1011 QCFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAW 1070
Query: 294 SSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
S + L+ASAS D +R+W G + +LRGH+ V + FSP G + + + S D T
Sbjct: 1071 SPDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPN-GEI--IATCSTDQT 1127
Query: 354 CRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSD 413
+IWD + G+ + + ++ +F AF+ +G + + S D
Sbjct: 1128 VKIWDWQ-----------------QGKCLKTLTG---HTNWVFDIAFSPDGKILASASHD 1167
Query: 414 TLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS--GCAVAS 458
R+W+ NT H I + GH + V+ V FS G VAS
Sbjct: 1168 QTVRIWDV---NTGKC----HHICI--GHTHLVSSVAFSPDGEVVAS 1205
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 179/432 (41%), Gaps = 62/432 (14%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
V + + ++ ++ H V F G+ + +GS DR +KIW+ T CL + GH +
Sbjct: 797 VSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVY 856
Query: 290 DLAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
+A S ++ ++ S S D I++W + I L GHT V ++AFSP + L S
Sbjct: 857 SIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQT---LACVS 913
Query: 350 DDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVT 409
D + R+W+ R Q Y + A P AF+ + + +
Sbjct: 914 LDQSVRLWNCRTGQCLKAWY-------------GNTDWALP-------VAFSPDRQILAS 953
Query: 410 GSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKED 469
GS+D ++W+ Q I L GH + + + FS +LA +S D
Sbjct: 954 GSNDKTVKLWDW---------QTGKYISSLEGHTDFIYGIAFS----PDSQTLASAST-D 999
Query: 470 STPKFKN--SWFCHDNIVTCSRDGSAIIWIPRSRRSHPKAARWT-QAYHLKVPPPPMPPQ 526
S+ + N + C ++ + A+++ P+ + +A T + +++
Sbjct: 1000 SSVRLWNISTGQCFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNIST-------- 1051
Query: 527 PPRGGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTY 586
G + + + + WS D + + +A D + +W+ G V L GH+ Y
Sbjct: 1052 ---GQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRVY 1108
Query: 587 VLDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIR--------IYEISRFRDGASIILS--D 636
P N I + D +WD +G ++ +++I+ DG + + D
Sbjct: 1109 SAIFSP-NGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILASASHD 1167
Query: 637 DVGQLYILNTGQ 648
+++ +NTG+
Sbjct: 1168 QTVRIWDVNTGK 1179
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 155/417 (37%), Gaps = 88/417 (21%)
Query: 246 VYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNALVASASN 305
+ A F G+ + T D V++W +++ L CRGH + + S + ++AS
Sbjct: 645 ILSAAFSPEGQLLATCDTDCHVRVWEVKSGKLLLICRGHSNWVRFVVFSPDGEILASCGA 704
Query: 306 DCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD------- 358
D +++W + DG+ I L GH V ++AF P + L S+S D T ++WD
Sbjct: 705 DENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGET---LASASGDKTIKLWDIQDGTCL 761
Query: 359 ---------ARYSQFSP---------RIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAF 400
R FSP + + D G+ + S + + AF
Sbjct: 762 QTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKS---HTGWVRSVAF 818
Query: 401 NANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRF 460
+A+G +GS D ++WN + GH N V + +S
Sbjct: 819 SADGQTLASGSGDRTIKIWNY---------HTGECLKTYIGHTNSVYSIAYS-----PDS 864
Query: 461 SLADSSKEDSTPKFKNSWFCHDNI--------------VTCSRDGSAIIWIP---RSRRS 503
+ S D T K W C +I V S DG + + R
Sbjct: 865 KILVSGSGDRTIKL---WDCQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLW 921
Query: 504 HPKAARWTQAYHLKVPPPPMPPQPPRGGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCR 563
+ + + +A++ G LP + +S D + + + D
Sbjct: 922 NCRTGQCLKAWY---------------GNTDWALP-------VAFSPDRQILASGSNDKT 959
Query: 564 ICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIRI 620
+ +W+ G + SL GHT+ Y + P + +A SA D +W+I G +I
Sbjct: 960 VKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLA-SASTDSSVRLWNISTGQCFQI 1015
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%)
Query: 231 QKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
Q+ + +K + GH N V+ F G+ + + S D+ V+IW + T C C GH ++
Sbjct: 1134 QQGKCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVSS 1193
Query: 291 LAVSSNNALVASASNDCIIRVWRLPDGLPISVLRG 325
+A S + +VAS S D +R+W + G + +LR
Sbjct: 1194 VAFSPDGEVVASGSQDQTVRIWNVKTGECLQILRA 1228
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 119/336 (35%), Gaps = 92/336 (27%)
Query: 286 GDITDLAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQL 345
G+I A S L+A+ DC +RVW + G + + RGH+ V + FSP G + L
Sbjct: 643 GNILSAAFSPEGQLLATCDTDCHVRVWEVKSGKLLLICRGHSNWVRFVVFSP-DGEI--L 699
Query: 346 LSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGT 405
S D ++W R D V + + H++F AF+ +G
Sbjct: 700 ASCGADENVKLWSVR--------------DGVCIKTLT------GHEHEVFSVAFHPDGE 739
Query: 406 VFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS--GCAVASRFSLA 463
+ S D ++W+ Q + L+GH + V V FS G +A
Sbjct: 740 TLASASGDKTIKLWDI---------QDGTCLQTLTGHTDWVRCVAFSPDGNTLA------ 784
Query: 464 DSSKEDSTPKFKNSWFCHDNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVPPPPM 523
SS D T K + G + R+ +SH R
Sbjct: 785 -SSAADHTIKLWD-----------VSQGKCL----RTLKSHTGWVR-------------- 814
Query: 524 PPQPPRGGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTE 583
+ +S D + + + D I +WN G + + GHT
Sbjct: 815 ---------------------SVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTN 853
Query: 584 STYVLDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIR 619
S Y + P + +I +S D +WD I I+
Sbjct: 854 SVYSIAYSP-DSKILVSGSGDRTIKLWDCQTHICIK 888
>sp|Q1LV15|WDR69_DANRE Outer row dynein assembly protein 16 homolog OS=Danio rerio
GN=wdr69 PE=2 SV=2
Length = 415
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 99/219 (45%), Gaps = 33/219 (15%)
Query: 234 QNIKRVRGHRNAVYCAIFDR-SGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLA 292
+ + + GHRN VY F+ G V TGS D+ K+WS ET C + RGH +I LA
Sbjct: 125 EELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLA 184
Query: 293 VSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
+ + LVA+ S D ++W + G +S L GH A + ++ F+ +L++ S D
Sbjct: 185 FNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGD---RLVTGSFDH 241
Query: 353 TCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSS 412
T +WD PS GR + S +I C FN + ++ T S
Sbjct: 242 TAILWDV-------------PS----GRKVHVLSG---HRGEISCVQFNWDCSLIATASL 281
Query: 413 DTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQF 451
D +VW+A + + L GH ++V V F
Sbjct: 282 DKSCKVWDA---------EGGQCLATLLGHNDEVLDVCF 311
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 80/187 (42%), Gaps = 23/187 (12%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAV 293
+ + + GHR + C F+ + T S D+ K+W E CLA+ GH ++ D+
Sbjct: 252 RKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCF 311
Query: 294 SSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
+ L+A+AS D RV+ + L GH ++ + F+ + V L++S D T
Sbjct: 312 NYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRV---LTASVDKT 368
Query: 354 CRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSD 413
R+W + A S +IF CAFN G +TGS D
Sbjct: 369 SRVWCVKTG--------------------ACLQVLEGHSDEIFSCAFNYEGDTIITGSKD 408
Query: 414 TLARVWN 420
R+W+
Sbjct: 409 NTCRIWH 415
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 106/242 (43%), Gaps = 40/242 (16%)
Query: 231 QKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
+K + ++ H + F++SG ITGS DR KIW + L + GH +
Sbjct: 80 RKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVV-- 137
Query: 291 LAVSSNNAL---VASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLS 347
A++ NN VA+ S D ++W G RGHTA + +AF+P+ V +
Sbjct: 138 YAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLV---AT 194
Query: 348 SSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVF 407
S D T ++WD + S+ AG + I C FN G
Sbjct: 195 GSMDTTAKLWDVESGE-------------------EVSTLAGHFAEIISLC-FNTTGDRL 234
Query: 408 VTGSSDTLARVWNACKPNTDDSDQPN-HEIDVLSGHENDVNYVQFS-GCAVASRFSLADS 465
VTGS D A +W D P+ ++ VLSGH +++ VQF+ C++ + SL S
Sbjct: 235 VTGSFDHTAILW----------DVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKS 284
Query: 466 SK 467
K
Sbjct: 285 CK 286
>sp|Q5BK30|WDR69_RAT Outer row dynein assembly protein 16 homolog OS=Rattus norvegicus
GN=Wdr69 PE=2 SV=1
Length = 415
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 23/186 (12%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAV 293
+ + + GH + A+F ++TGS D+ +W + C+A+ GH+ +I D
Sbjct: 252 RKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCF 311
Query: 294 SSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
L+A+AS D RV+ I+ L GH ++ I+F+P+ +LL+ S D T
Sbjct: 312 DYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGN---RLLTGSSDKT 368
Query: 354 CRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSD 413
RIWD + Q + + +IF CAFN G + +TGS D
Sbjct: 369 ARIWDVQTGQCLQVLE--------------------GHTDEIFSCAFNYKGNIVITGSKD 408
Query: 414 TLARVW 419
R+W
Sbjct: 409 NSCRIW 414
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 108/244 (44%), Gaps = 41/244 (16%)
Query: 234 QNIKRVRGHRNAVYCAIFDR-SGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLA 292
+ + + GHRN VY F+ G + TGS D+ K+WS ET C + RGH +I L+
Sbjct: 125 EELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLS 184
Query: 293 VSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
+ + +VA+ S D ++W + G + L GH A + +++F S ++++ S D
Sbjct: 185 FNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDT---SGDRIITGSFDH 241
Query: 353 TCRIWDA-----------RYSQFSPRIYIPRPS--------------DAVAGRNMAPSSS 387
T +WDA ++ S ++ S DA +G+ +A +
Sbjct: 242 TVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTG 301
Query: 388 AGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVN 447
+I F+ G + T S+D ARV+NA I L GHE +++
Sbjct: 302 ---HDDEILDSCFDYTGKLIATASADGTARVYNA---------TTRKCITKLEGHEGEIS 349
Query: 448 YVQF 451
+ F
Sbjct: 350 KISF 353
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 148/398 (37%), Gaps = 101/398 (25%)
Query: 276 YCLASCRGHEGDITDLAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAF 335
Y R H +T++A++ + + S D +VW G + L GH V AIAF
Sbjct: 83 YLFKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAF 142
Query: 336 SPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQI 395
+ G ++ + S D TC++W A + + Y + + +I
Sbjct: 143 NNPYGD--KIATGSFDKTCKLWSAE----TGKCY----------------HTFRGHTAEI 180
Query: 396 FCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCA 455
C +FN TV TGS DT A++W+ Q E+ L+GH ++ + F
Sbjct: 181 VCLSFNPQSTVVATGSMDTTAKLWDI---------QSGEEVVTLTGHLAEIISLSF---- 227
Query: 456 VASRFSLADSSKEDSTPKFKNSWFCHDNIVTCSRDGSAIIW-IPRSRRSHPKAARWTQAY 514
D+S D I+T S D + ++W R+ H +
Sbjct: 228 --------DTSG--------------DRIITGSFDHTVVVWDASTGRKVHTLIGHCAE-- 263
Query: 515 HLKVPPPPMPPQPPRGGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSL 574
++ ++S D +L MD +W+A G
Sbjct: 264 ----------------------------ISSALFSWDCSLILTGSMDKTCMLWDATSGKC 295
Query: 575 VHSLTGHTESTYVLD-VHPFNPRIAMSAGYDGKTIVWDI--------WEGIPIRIYEISR 625
V +LTGH + +LD + ++ +A DG V++ EG I +IS
Sbjct: 296 VATLTGHDDE--ILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISF 353
Query: 626 FRDGASIIL--SDDVGQLYILNTGQGESQKDAKYDQFF 661
G ++ SD +++ + TGQ + D+ F
Sbjct: 354 NPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIF 391
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/394 (20%), Positives = 146/394 (37%), Gaps = 83/394 (21%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSS 295
K +R H + +++G ITGS DR K+W + L + GH + A++
Sbjct: 85 FKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVV--YAIAF 142
Query: 296 NNAL---VASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
NN +A+ S D ++W G RGHTA + ++F+P+ V + S D
Sbjct: 143 NNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVV---ATGSMDT 199
Query: 353 TCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSS 412
T ++WD + +G + + +I +F+ +G +TGS
Sbjct: 200 TAKLWDIQ-----------------SGEEVVTLTG---HLAEIISLSFDTSGDRIITGSF 239
Query: 413 DTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS-GCAVASRFSLADSSK--ED 469
D VW+A ++ L GH +++ FS C++ S+ + +
Sbjct: 240 DHTVVVWDA---------STGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDA 290
Query: 470 STPKFKNSWFCHDN-------------IVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHL 516
++ K + HD+ I T S DG+A ++ +R+ K + +
Sbjct: 291 TSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKL----EGHEG 346
Query: 517 KVPPPPMPPQPPRGGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVH 576
++ PQ R +L D +W+ G +
Sbjct: 347 EISKISFNPQGNR-------------------------LLTGSSDKTARIWDVQTGQCLQ 381
Query: 577 SLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVW 610
L GHT+ + + + I ++ D +W
Sbjct: 382 VLEGHTDEIFSCAFN-YKGNIVITGSKDNSCRIW 414
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSS 295
I ++ GH + F+ G ++TGS D+ +IW ++T CL GH +I A +
Sbjct: 338 ITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNY 397
Query: 296 NNALVASASNDCIIRVWR 313
+V + S D R+WR
Sbjct: 398 KGNIVITGSKDNSCRIWR 415
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIW 270
VQ Q ++ + GH + ++ F+ G VITGS D +IW
Sbjct: 374 VQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
>sp|Q09715|TUP11_SCHPO Transcriptional repressor tup11 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tup11 PE=1 SV=1
Length = 614
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 42/223 (18%)
Query: 234 QNIKRV-RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLA 292
Q ++ V GH +Y F +GR++++GS DR ++W +ET C+ G +T +A
Sbjct: 392 QKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENG-VTAIA 450
Query: 293 VSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
+S N+ +A S D IIRVW + G + L GH +V +IAFSP S+ LLS S D
Sbjct: 451 ISPNDQFIAVGSLDQIIRVWSV-SGTLVERLEGHKESVYSIAFSPD-SSI--LLSGSLDK 506
Query: 353 TCRIWDARYSQFSPRIYIPRP-----------SDAVAGRNMAPSSSAGP----------- 390
T ++W+ + ++ S + +P +D V ++P S G
Sbjct: 507 TIKVWELQATR-SVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFW 565
Query: 391 -----------QSHQ--IFCCAFNANGTVFVTGSSDTLARVWN 420
Q H+ + F+ +G F +GS D AR+W+
Sbjct: 566 DLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWS 608
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNALV 300
GH + V R+ ++GS DR ++ W ++T +C+GH+ + + S +
Sbjct: 536 GHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQF 595
Query: 301 ASASNDCIIRVWRLPDGLP 319
AS S D R+W + P
Sbjct: 596 ASGSGDLRARIWSIDPASP 614
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
GV I S +++F+ +D I VW+ + G+LV L GH ES Y + P + I +S
Sbjct: 445 GVTAIAISPNDQFIAVGSLDQIIRVWSVS-GTLVERLEGHKESVYSIAFSP-DSSILLSG 502
Query: 602 GYDGKTIVWDI 612
D VW++
Sbjct: 503 SLDKTIKVWEL 513
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
V I +S D ++++ D +I +W+ + + + +GH + Y LD N R +S
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFS-HNGRFIVSGS 421
Query: 603 YDGKTIVWDIWEGIPIRIYEI 623
D +WD+ G I EI
Sbjct: 422 GDRTARLWDVETGQCILKLEI 442
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETA 275
+Q Q+ +GH+N+V F GR +GS D +IWS++ A
Sbjct: 567 LQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSIDPA 612
>sp|Q54KL5|WDR5_DICDI WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum
GN=wdr5 PE=3 SV=1
Length = 335
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 31/214 (14%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNA 298
++GH ++ F G+++ + S D+ +KIW + GH+ I+D+A S ++
Sbjct: 42 LKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSK 101
Query: 299 LVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
L+ SAS+D I++W + G + L+GH V ++F+P+ ++S S D RIWD
Sbjct: 102 LICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSN---LIVSGSFDENVRIWD 158
Query: 359 ARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARV 418
+ + I SD V G + FN +GT+ V+GS D R+
Sbjct: 159 VNTGECTKM--ISAHSDPVTGVH------------------FNRDGTLVVSGSYDGTVRI 198
Query: 419 WNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS 452
W+ + Q + I G E V++V+FS
Sbjct: 199 WDTT------TGQLLNTISTEDGKE--VSFVKFS 224
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 101/237 (42%), Gaps = 39/237 (16%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSN 296
+ + GH+ + + + + + + SDD+ +KIW +E+ + + +GH+ + ++ +
Sbjct: 82 RTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQ 141
Query: 297 NALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
+ L+ S S D +R+W + G ++ H+ VT + F+ R G++ ++S S DGT RI
Sbjct: 142 SNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFN-RDGTL--VVSGSYDGTVRI 198
Query: 357 WDARYSQFSPRI------------YIPRPSDAVAG---------------RNMAPSSSAG 389
WD Q I + P +AG + + +
Sbjct: 199 WDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHK 258
Query: 390 PQSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDV 446
+ + IF G VTGS D L ++N Q + L+GHE+ V
Sbjct: 259 NEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNL---------QTREIVQTLAGHEDVV 306
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 21/175 (12%)
Query: 531 GPRQRILPTPR-GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLD 589
G +R L + G++ I WS D++ + +A D I +W+ G +V +L GH E YV
Sbjct: 78 GKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKE--YVFG 135
Query: 590 VHPFNPR--IAMSAGYDGKTIVWDIWEGIPIRIYE--------ISRFRDGASIILSDDVG 639
V FNP+ + +S +D +WD+ G ++ + RDG ++ G
Sbjct: 136 V-SFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDG 194
Query: 640 QLYILNTGQGE-----SQKDAKYDQFFLGDYRPLVQDTYGNVLDQETQLAPHRRN 689
+ I +T G+ S +D K F + P + LD +L + N
Sbjct: 195 TVRIWDTTTGQLLNTISTEDGKEVSFV--KFSPNGKFVLAGTLDNTLRLWSYNNN 247
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 236 IKRVRGHRNAVYCAIFDRS---GRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLA 292
+K GH+N YC S G++++TGS+D L+ I++++T + + GHE + +A
Sbjct: 251 LKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVA 310
Query: 293 VSSNNALVASAS--NDCIIRVWR 313
++AS + D +++W+
Sbjct: 311 CHPTENIIASGALEKDRSVKIWK 333
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 525 PQPPRGGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTES 584
PQ P + + + ++ + +S D +++ +A D I +W A DG +L GH E
Sbjct: 31 PQTPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEG 90
Query: 585 TYVLDVHPFNPRIAMSAGYDGKTI-VWDIWEGIPIR--------IYEISRFRDGASIILS 635
+ D+ + + D KTI +WD+ G ++ ++ +S F +++I+S
Sbjct: 91 --ISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVS-FNPQSNLIVS 147
Query: 636 ---DDVGQLYILNTGQ 648
D+ +++ +NTG+
Sbjct: 148 GSFDENVRIWDVNTGE 163
>sp|Q93794|SEL10_CAEEL F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis elegans
GN=sel-10 PE=1 SV=3
Length = 587
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 119/280 (42%), Gaps = 46/280 (16%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
+ K + + + GH V+ + + GRY+++GS DR VK+WS L + +GH +
Sbjct: 283 IDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVR 342
Query: 290 DLAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
+A++ +++ + S D +RVW + G ++ L GH AAV + F ++S
Sbjct: 343 CMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTT-----VVSGG 395
Query: 350 DDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVT 409
D T +IW+A + R + G N ++++ F + ++ +
Sbjct: 396 YDFTVKIWNA---------HTGRCIRTLTGHN-----------NRVYSLLFESERSIVCS 435
Query: 410 GSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSG-----CAVASRFSLAD 464
GS DT RVW+ +P + + +L GH + + +Q G C S + D
Sbjct: 436 GSLDTSIRVWDFTRPEGQEC------VALLQGHTSLTSGMQLRGNILVSCNADSHVRVWD 489
Query: 465 SSKEDSTPKFKN--------SWFCHDNIVTCSRDGSAIIW 496
+ WF + + T S DG+ +W
Sbjct: 490 IHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLW 529
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 68/126 (53%), Gaps = 9/126 (7%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSM---ETAYCLASCRGHEGDITDLA 292
I+ + GH N VY +F+ V +GS D +++W E C+A +GH + +
Sbjct: 411 IRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQ 470
Query: 293 VSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
+ N ++ S + D +RVW + +G + +L GH +A+T++ + R + +SSDDG
Sbjct: 471 LRGN--ILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRN----MVATSSDDG 524
Query: 353 TCRIWD 358
T ++WD
Sbjct: 525 TVKLWD 530
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 155/437 (35%), Gaps = 76/437 (17%)
Query: 196 RGLGLREIGGGFTRHHRAPSIRAAC----YAIAKPSTMVQKMQ----NIKRVRGHRNAVY 247
+ LG+ E +HH P+ R AIA T+ +Q N+ R + +
Sbjct: 165 KSLGVEEF-----KHHPDPTDRVTGAWQGTAIAAGVTIPDHIQPCDLNVHRFLKLQK--F 217
Query: 248 CAIFDRSG---RYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNALVASAS 304
IF+R+ RY+ D++ K W+ A RGHE + ++ LV + S
Sbjct: 218 GDIFERAADKSRYL---RADKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDDVLV-TGS 273
Query: 305 NDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQF 364
+D ++VW + G + L GHT V S ++S S D T ++W
Sbjct: 274 DDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQ---CGRYIVSGSTDRTVKVWSTVDGSL 330
Query: 365 SPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACKP 424
+ Q H G++ VTGS DT RVW+
Sbjct: 331 LHTL----------------------QGHTSTVRCMAMAGSILVTGSRDTTLRVWDV--- 365
Query: 425 NTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTPKFKNSWFCHDNI 484
+ + L GH V VQF G V S D T K N+
Sbjct: 366 ------ESGRHLATLHGHHAAVRCVQFDGTTVV-------SGGYDFTVKIWNAHTGRCIR 412
Query: 485 VTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVPPPPMPPQPPRGGPRQRILPTPRGVN 544
+ + S RS + L P G Q + +G
Sbjct: 413 TLTGHNNRVYSLLFESERSIVCSGS------LDTSIRVWDFTRPEG---QECVALLQGHT 463
Query: 545 MIVWSLDNR--FVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
+ + R +++ D + VW+ +G+ VH L+GH + + + F + ++
Sbjct: 464 SLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSA--ITSLQWFGRNMVATSS 521
Query: 603 YDGKTIVWDIWEGIPIR 619
DG +WDI G IR
Sbjct: 522 DDGTVKLWDIERGALIR 538
>sp|Q9V3J8|WDS_DROME Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1
Length = 361
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 39/218 (17%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNA 298
+ GH AV F +G ++ + S D+L+KIW + GH+ I+D+A SS++
Sbjct: 68 LAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 127
Query: 299 LVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
L+ S S+D ++VW L G + L+GH+ V F+P+ + +S S D + RIWD
Sbjct: 128 LLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLI---VSGSFDESVRIWD 184
Query: 359 ARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARV 418
R + +P SD V+ + FN +G++ V+ S D L R+
Sbjct: 185 VRTGKCLKT--LPAHSDPVSAVH------------------FNRDGSLIVSSSYDGLCRI 224
Query: 419 WNA----CKPNTDDSDQPNHEIDVLSGHENDVNYVQFS 452
W+ C D D P V++V+FS
Sbjct: 225 WDTASGQCLKTLIDDDNP------------PVSFVKFS 250
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 38/236 (16%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSN 296
K + GH+ + + R +++GSDD+ +K+W + T L + +GH + +
Sbjct: 108 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQ 167
Query: 297 NALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
+ L+ S S D +R+W + G + L H+ V+A+ F+ R GS+ ++SSS DG CRI
Sbjct: 168 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN-RDGSL--IVSSSYDGLCRI 224
Query: 357 WD-----------------ARYSQFSPR-IYIPRPS--------DAVAGRNMAPSSSAGP 390
WD + +FSP YI + D G+ + +
Sbjct: 225 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 284
Query: 391 QSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDV 446
+ + IF G V+GS D + +WN Q + L GH + V
Sbjct: 285 EKYCIFANFSVTGGKWIVSGSEDNMVYIWNL---------QSKEVVQKLQGHTDTV 331
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 232 KMQNIKRVRGHRNAVYCAIFDRS---GRYVITGSDDRLVKIWSMETAYCLASCRGHEGDI 288
K + +K GH+N YC + S G+++++GS+D +V IW++++ + +GH +
Sbjct: 272 KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTV 331
Query: 289 TDLAVSSNNALVASAS--NDCIIRVWR 313
A ++ASA+ ND I++W+
Sbjct: 332 LCTACHPTENIIASAALENDKTIKLWK 358
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Query: 251 FDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGD----ITDLAVSSNNALVASASND 306
F +G+Y++ + D +K+W CL + GH+ + + +V+ +V S S D
Sbjct: 249 FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV-SGSED 307
Query: 307 CIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIW 357
++ +W L + L+GHT V A P ++ + +D T ++W
Sbjct: 308 NMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTE-NIIASAALENDKTIKLW 357
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 13/122 (10%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPR--IAM 599
G++ + WS D+R +++ D + VW + G + +L GH+ + + FNP+ + +
Sbjct: 116 GISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCN---FNPQSNLIV 172
Query: 600 SAGYDGKTIVWDIWEGIPIR--------IYEISRFRDGASIILSDDVGQLYILNTGQGES 651
S +D +WD+ G ++ + + RDG+ I+ S G I +T G+
Sbjct: 173 SGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 232
Query: 652 QK 653
K
Sbjct: 233 LK 234
>sp|Q39190|PRL2_ARATH Protein pleiotropic regulator PRL2 OS=Arabidopsis thaliana GN=PRL2
PE=2 SV=2
Length = 479
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 115/260 (44%), Gaps = 43/260 (16%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAV 293
+N + ++GH V FD S + TGS DR +KIW + T + GH G + LAV
Sbjct: 161 KNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAV 220
Query: 294 SSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
S+ + + SA +D ++ W L I GH V +A P ++ +L+ D
Sbjct: 221 SNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHP---TLDVVLTGGRDSV 277
Query: 354 CRIWDARYSQFSPRIYI-PRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSS 412
CR+WD R +I++ P SD S A P Q+ +TGS
Sbjct: 278 CRVWDIRTKM---QIFVLPHDSDVF-------SVLARPTDPQV------------ITGSH 315
Query: 413 DTLARVWNACKPNTDDSDQPNHE--IDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDS 470
D+ + W+ + + NH+ + ++ H + ++V S AD+ K+ S
Sbjct: 316 DSTIKFWD-LRYGKSMATITNHKKTVRAMALHPKENDFVSAS----------ADNIKKFS 364
Query: 471 TPKFKNSWFCHDNIVTCSRD 490
PK + FCH N+++ RD
Sbjct: 365 LPKGE---FCH-NMLSLQRD 380
>sp|Q91WQ5|TAF5L_MOUSE TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2
SV=1
Length = 589
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 12/170 (7%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNALV 300
GH V C F + Y+ TGS D+ V++WS + + GH G + L+ S N +
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYL 483
Query: 301 ASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
ASA D +++W L G LRGHT ++T++AFSP G + S+S D + R+WD R
Sbjct: 484 ASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLI---ASASMDNSVRVWDIR 540
Query: 361 YSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTG 410
+ + P+D +G + + Q + F A + VTG
Sbjct: 541 STCCNT------PADGSSGELVGVYTG---QMSNVLSVQFMACNLLLVTG 581
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 85/224 (37%), Gaps = 29/224 (12%)
Query: 235 NIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVS 294
N +GH V+ Y +GS DR ++WS + Y L GH D+ +
Sbjct: 376 NTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFH 435
Query: 295 SNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
N+ +A+ S D +R+W G + + GH V +++FSP L S+ +D
Sbjct: 436 PNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGK---YLASAGEDQRL 492
Query: 355 RIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDT 414
++WD + + I AF+ + + + S D
Sbjct: 493 KLWDLASGTLFKEL--------------------RGHTDSITSLAFSPDSGLIASASMDN 532
Query: 415 LARVWN----ACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGC 454
RVW+ C D S + V +G ++V VQF C
Sbjct: 533 SVRVWDIRSTCCNTPADGSS--GELVGVYTGQMSNVLSVQFMAC 574
Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%)
Query: 231 QKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
Q+ +++ GHR V F +G+Y+ + +D+ +K+W + + RGH IT
Sbjct: 456 QQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITS 515
Query: 291 LAVSSNNALVASASNDCIIRVW 312
LA S ++ L+ASAS D +RVW
Sbjct: 516 LAFSPDSGLIASASMDNSVRVW 537
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 125/361 (34%), Gaps = 106/361 (29%)
Query: 256 RYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNALVASASNDCIIRVWRLP 315
+ + G D+ +K+WS+ + H D + + ++ + D
Sbjct: 281 KLLAAGFDNSCIKLWSLRSKKL--KSEPHHVDTSRIRLACDTLEEEENEED--------N 330
Query: 316 DGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSD 375
G + +LRGH V + F LLS S+D + R WD F+ + +
Sbjct: 331 TGTEMKILRGHCGPVYSTRFLADSSG---LLSCSEDMSIRYWDL--GSFTNTVLYQGHAY 385
Query: 376 AVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHE 435
V +++P S F +GS D AR+W S +
Sbjct: 386 PVWDVDISPFS------------------LYFASGSHDRTARLW---------SFDRTYP 418
Query: 436 IDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTPKFKNSWFCHDN---IVTCSRDGS 492
+ + +GH DV+ V+F H N + T S D +
Sbjct: 419 LRIYAGHLADVDCVKF-----------------------------HPNSNYLATGSTDKT 449
Query: 493 AIIWIPRSRRSHPKAARWTQAYHLKVPPPPMPPQPPRGGPRQRILPTPRG-VNMIVWSLD 551
+W + G R+ RG V + +S +
Sbjct: 450 VRLW------------------------------SAQQGNSVRLFTGHRGPVLSLSFSPN 479
Query: 552 NRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWD 611
+++ +A D R+ +W+ A G+L L GHT+S L P + IA SA D VWD
Sbjct: 480 GKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIA-SASMDNSVRVWD 538
Query: 612 I 612
I
Sbjct: 539 I 539
>sp|A8X8C6|TG125_CAEBR WD repeat-containing protein tag-125 OS=Caenorhabditis briggsae
GN=tag-125 PE=4 SV=1
Length = 368
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 28/202 (13%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSS 295
I + GH ++ F G+++ T S D+ VKIW+M C + GH+ + D A S+
Sbjct: 72 ISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSA 131
Query: 296 NNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
++ + +AS+D ++++ +P L+GHT V F+P+ V +S S D + R
Sbjct: 132 DSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLV---VSGSFDESVR 188
Query: 356 IWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTL 415
IWD R +P SD V+ +FN +G++ +GS D L
Sbjct: 189 IWDVRTGMCVKT--LPAHSDPVSA------------------VSFNRDGSLITSGSYDGL 228
Query: 416 ARVWN-----ACKPNTDDSDQP 432
R+W+ K DD + P
Sbjct: 229 VRIWDTANGQCVKTLVDDENPP 250
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
V ++ K ++GH N V+C F+ V++GS D V+IW + T C+ + H ++
Sbjct: 150 VPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVS 209
Query: 290 DLAVSSNNALVASASNDCIIRVWRLPDGLPISVLR-GHTAAVTAIAFSPRPGSVYQLLSS 348
++ + + +L+ S S D ++R+W +G + L V + FSP +LSS
Sbjct: 210 AVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGK---YILSS 266
Query: 349 SDDGTCRIWD 358
+ D T ++WD
Sbjct: 267 NLDNTLKLWD 276
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Query: 251 FDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGD----ITDLAVSSNNALVASASND 306
F +G+Y+++ + D +K+W L +GHE + + +V+ ++ S S D
Sbjct: 256 FSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWII-SGSED 314
Query: 307 CIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSD---DGTCRIW 357
C I VW L + L GHT AV A P + +++S D T RIW
Sbjct: 315 CKIYVWNLQTKEVVQSLEGHTQAVIASDCHP----MQNMIASGALEPDNTIRIW 364
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 13/122 (10%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPR--IAM 599
GVN WS D++ ++ A D + ++ + +L GHT + + FNP+ + +
Sbjct: 123 GVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCN---FNPQSSLVV 179
Query: 600 SAGYDGKTIVWDIWEGIPIR--------IYEISRFRDGASIILSDDVGQLYILNTGQGES 651
S +D +WD+ G+ ++ + +S RDG+ I G + I +T G+
Sbjct: 180 SGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQC 239
Query: 652 QK 653
K
Sbjct: 240 VK 241
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 553 RFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTI-VW 610
+++++ DC+I VWN +V SL GHT++ D HP IA A TI +W
Sbjct: 306 KWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIW 364
>sp|O75529|TAF5L_HUMAN TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1
SV=1
Length = 589
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 78/170 (45%), Gaps = 12/170 (7%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNALV 300
GH V C F + Y+ TGS D+ V++WS + + GH G + LA S N +
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYL 483
Query: 301 ASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
ASA D +++W L G LRGHT +T++ FSP G + S+S D + R+WD R
Sbjct: 484 ASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLI---ASASMDNSVRVWDIR 540
Query: 361 YSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTG 410
Y P+D + + + Q + F A + VTG
Sbjct: 541 ------NTYCSAPADGSSSELVGVYTG---QMSNVLSVQFMACNLLLVTG 581
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 89/226 (39%), Gaps = 33/226 (14%)
Query: 235 NIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVS 294
N +GH V+ Y +GS DR ++WS + Y L GH D+ +
Sbjct: 376 NTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFH 435
Query: 295 SNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTC 354
N+ +A+ S D +R+W G + + GH V ++AFSP L S+ +D
Sbjct: 436 PNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGK---YLASAGEDQRL 492
Query: 355 RIWDARYSQFSPRIY--IPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSS 412
++WD S +Y + +D + +P S + + S
Sbjct: 493 KLWDLA----SGTLYKELRGHTDNITSLTFSPDSG------------------LIASASM 530
Query: 413 DTLARVWNA----CKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGC 454
D RVW+ C D S + + V +G ++V VQF C
Sbjct: 531 DNSVRVWDIRNTYCSAPADGSS--SELVGVYTGQMSNVLSVQFMAC 574
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%)
Query: 231 QKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
Q+ +++ GHR V F +G+Y+ + +D+ +K+W + + RGH +IT
Sbjct: 456 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITS 515
Query: 291 LAVSSNNALVASASNDCIIRVW 312
L S ++ L+ASAS D +RVW
Sbjct: 516 LTFSPDSGLIASASMDNSVRVW 537
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 129/358 (36%), Gaps = 100/358 (27%)
Query: 256 RYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNALVASASNDCIIRVWRLP 315
+ + G D+ +K+WS+ + H+ D++ + ++ + +D
Sbjct: 281 KLLAAGFDNSCIKLWSLRSKKL--KSEPHQVDVSRIHLACDILEEEDDEDD--------N 330
Query: 316 DGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSD 375
G + +LRGH V + F LLS S+D + R WD F+ + +
Sbjct: 331 AGTEMKILRGHCGPVYSTRFLADSSG---LLSCSEDMSIRYWDL--GSFTNTVLYQGHAY 385
Query: 376 AVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHE 435
V +++P S F +GS D AR+W S +
Sbjct: 386 PVWDLDISPYS------------------LYFASGSHDRTARLW---------SFDRTYP 418
Query: 436 IDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTPKFKNSWFCHDNIVTCSRDGSAII 495
+ + +GH DV+ V+F NS + + T S D + +
Sbjct: 419 LRIYAGHLADVDCVKFH----------------------PNS----NYLATGSTDKTVRL 452
Query: 496 WIPRSRRSHPKAARWTQAYHLKVPPPPMPPQPPRGGPRQRILPTPRG-VNMIVWSLDNRF 554
W + G R+ RG V + +S + ++
Sbjct: 453 W------------------------------SAQQGNSVRLFTGHRGPVLSLAFSPNGKY 482
Query: 555 VLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDI 612
+ +A D R+ +W+ A G+L L GHT++ L P + IA SA D VWDI
Sbjct: 483 LASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIA-SASMDNSVRVWDI 539
>sp|Q61FW2|SEL10_CAEBR F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis
briggsae GN=sel-10 PE=3 SV=1
Length = 589
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 118/294 (40%), Gaps = 51/294 (17%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNA 298
+RGH V + ++TGSDD +K+WS++ + GH G + +S
Sbjct: 253 LRGHEEHVITCM-QIHNDLLVTGSDDNTLKVWSIDDGEVKHTLNGHSGGVWTSQISQCGR 311
Query: 299 LVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
+ S S D ++VWR DG + L+GHT+ V +A + L++ S D T R+WD
Sbjct: 312 YIVSGSTDRTVKVWRAEDGFLLHTLQGHTSTVRCMAMANTT-----LVTGSRDCTLRVWD 366
Query: 359 ----------------ARYSQFSPRIYIP-------RPSDAVAGRNMAPSSSAGPQSHQI 395
R QF I + + DA +G+ + + S+++
Sbjct: 367 IETGLHVRTLQGHQAAVRCVQFDGNIVVSGGYDFTVKIWDAFSGKCL---RTLIGHSNRV 423
Query: 396 FCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSG-- 453
+ + + ++ +GS DT RVW+ +P + I LSGH + + +Q G
Sbjct: 424 YSLLYESERSIVCSGSLDTSIRVWDFSRP------EGQELIAFLSGHTSLTSGMQLRGNI 477
Query: 454 ---CAVASRFSLADSSKEDSTPKFKN--------SWFCHDNIVTCSRDGSAIIW 496
C S + D + WF + T S DGS +W
Sbjct: 478 LVSCNADSHVRVWDIYEGTCIHILSGHRSAITSLQWFGRGLVATSSDDGSVKLW 531
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 10/127 (7%)
Query: 235 NIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVS 294
+++ ++GH+ AV C FD G V++G D VKIW + CL + GH + L
Sbjct: 372 HVRTLQGHQAAVRCVQFD--GNIVVSGGYDFTVKIWDAFSGKCLRTLIGHSNRVYSLLYE 429
Query: 295 SNNALVASASNDCIIRVWRL--PDGLP-ISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDD 351
S ++V S S D IRVW P+G I+ L GHT+ + + G++ L+S + D
Sbjct: 430 SERSIVCSGSLDTSIRVWDFSRPEGQELIAFLSGHTSLTSGMQLR---GNI--LVSCNAD 484
Query: 352 GTCRIWD 358
R+WD
Sbjct: 485 SHVRVWD 491
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 66/126 (52%), Gaps = 9/126 (7%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSM---ETAYCLASCRGHEGDITDLA 292
++ + GH N VY +++ V +GS D +++W E +A GH + +
Sbjct: 413 LRTLIGHSNRVYSLLYESERSIVCSGSLDTSIRVWDFSRPEGQELIAFLSGHTSLTSGMQ 472
Query: 293 VSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
+ N ++ S + D +RVW + +G I +L GH +A+T++ + R + +SSDDG
Sbjct: 473 LRGN--ILVSCNADSHVRVWDIYEGTCIHILSGHRSAITSLQWFGRG----LVATSSDDG 526
Query: 353 TCRIWD 358
+ ++WD
Sbjct: 527 SVKLWD 532
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 146/380 (38%), Gaps = 65/380 (17%)
Query: 247 YCAIFDRSG---RYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNALVASA 303
Y I++RS RY+ +++ K W A RGHE + + +N L+ +
Sbjct: 219 YGPIYERSADKSRYL---RGEKIEKNWHSRPIMGSAILRGHEEHVIT-CMQIHNDLLVTG 274
Query: 304 SNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQ 363
S+D ++VW + DG L GH+ V S ++S S D T ++W
Sbjct: 275 SDDNTLKVWSIDDGEVKHTLNGHSGGVWTSQISQ---CGRYIVSGSTDRTVKVW------ 325
Query: 364 FSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACK 423
R D + +S + C A AN T VTGS D RVW+
Sbjct: 326 --------RAEDGFLLHTLQGHTST------VRCMAM-AN-TTLVTGSRDCTLRVWDI-- 367
Query: 424 PNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTPKFKNSWF--CH 481
+ + L GH+ V VQF G V S D T K +++ C
Sbjct: 368 -------ETGLHVRTLQGHQAAVRCVQFDGNIVVS-------GGYDFTVKIWDAFSGKCL 413
Query: 482 DNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVPPPPMPPQPPRGGPRQRILPTPR 541
++ S ++++ S RS + L P G Q ++
Sbjct: 414 RTLIGHSNRVYSLLY--ESERSIVCSGS------LDTSIRVWDFSRPEG---QELIAFLS 462
Query: 542 GVNMIVWSLDNR--FVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAM 599
G + + R +++ D + VW+ +G+ +H L+GH + + + F +
Sbjct: 463 GHTSLTSGMQLRGNILVSCNADSHVRVWDIYEGTCIHILSGHRSA--ITSLQWFGRGLVA 520
Query: 600 SAGYDGKTIVWDIWEGIPIR 619
++ DG +WDI G+ IR
Sbjct: 521 TSSDDGSVKLWDIERGVLIR 540
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 553 RFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKTIVWDI 612
R++++ D + VW A DG L+H+L GHT + + ++ D VWDI
Sbjct: 311 RYIVSGSTDRTVKVWRAEDGFLLHTLQGHTSTVRCM---AMANTTLVTGSRDCTLRVWDI 367
Query: 613 WEGIPIRIYE 622
G+ +R +
Sbjct: 368 ETGLHVRTLQ 377
>sp|Q42384|PRL1_ARATH Protein pleiotropic regulatory locus 1 OS=Arabidopsis thaliana
GN=PRL1 PE=1 SV=1
Length = 486
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 108/252 (42%), Gaps = 37/252 (14%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAV 293
+N + ++GH V FD S + TGS DR +KIW + T + GH + LAV
Sbjct: 167 KNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAV 226
Query: 294 SSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
S+ + + SA +D ++ W L I GH + V +A P ++ LL+ D
Sbjct: 227 SNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHP---TLDVLLTGGRDSV 283
Query: 354 CRIWDARYSQFSPRIYIPRPSDAVAGR-NMAPSSSAGPQSHQIFCCAFNANGTVFVTGSS 412
CR+WD R +I+ A++G N S P Q+ VTGS
Sbjct: 284 CRVWDIRTKM---QIF------ALSGHDNTVCSVFTRPTDPQV------------VTGSH 322
Query: 413 DTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTP 472
DT + W+ T + L+ H+ V + A + AD++K+ S P
Sbjct: 323 DTTIKFWDLRYGKT---------MSTLTHHKKSVRAMTLHPKENAFASASADNTKKFSLP 373
Query: 473 KFKNSWFCHDNI 484
K + FCH+ +
Sbjct: 374 KGE---FCHNML 382
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 82/193 (42%), Gaps = 27/193 (13%)
Query: 232 KMQNIKRVRGHRNAVYCAIFDR-SGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
KMQ I + GH N V C++F R + V+TGS D +K W + +++ H+ +
Sbjct: 292 KMQ-IFALSGHDNTV-CSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRA 349
Query: 291 LAVSSNNALVASASNDCIIRVWRLPDG-LPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
+ + ASAS D + + LP G ++L + A+A + +++
Sbjct: 350 MTLHPKENAFASASADN-TKKFSLPKGEFCHNMLSQQKTIINAMAVN----EDGVMVTGG 404
Query: 350 DDGTCRIWDARYS---QFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTV 406
D+G+ WD + Q S I P ++ AG I+ ++ G+
Sbjct: 405 DNGSIWFWDWKSGHSFQQSETIVQPGSLESEAG---------------IYAACYDNTGSR 449
Query: 407 FVTGSSDTLARVW 419
VT +D ++W
Sbjct: 450 LVTCEADKTIKMW 462
>sp|Q15542|TAF5_HUMAN Transcription initiation factor TFIID subunit 5 OS=Homo sapiens
GN=TAF5 PE=1 SV=3
Length = 800
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 66/126 (52%), Gaps = 3/126 (2%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAV 293
Q ++ GH V C F + YV TGS DR V++W + C+ GH+G I L
Sbjct: 618 QPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTF 677
Query: 294 SSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
S N +A+ + D + +W + GL + L+GHT V ++ FS R G + L S S D T
Sbjct: 678 SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS-RDGEI--LASGSMDNT 734
Query: 354 CRIWDA 359
R+WDA
Sbjct: 735 VRLWDA 740
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 90/215 (41%), Gaps = 27/215 (12%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSS 295
+K + GH VY A F Y+++ S+D V++WS++T CL +GH + D S
Sbjct: 536 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 595
Query: 296 NNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
S +D + R+W P+ + GH A V F P V + S D T R
Sbjct: 596 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYV---ATGSADRTVR 652
Query: 356 IWDARYSQFSPRIY------IPRPSDAVAGRNMAPSSSAG---------------PQSHQ 394
+WD RI+ I + + GR +A ++ G + H
Sbjct: 653 LWDVLNGN-CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHT 711
Query: 395 IFCCA--FNANGTVFVTGSSDTLARVWNACKPNTD 427
C+ F+ +G + +GS D R+W+A K D
Sbjct: 712 DTVCSLRFSRDGEILASGSMDNTVRLWDAIKAFED 746
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 85/216 (39%), Gaps = 39/216 (18%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSN 296
K++R + A ++ D+ SDD L +I +TA L GH G + + S +
Sbjct: 502 KKLRSVKQASDLSLIDKE-------SDDVLERIMDEKTASELKILYGHSGPVYGASFSPD 554
Query: 297 NALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
+ S+S D +R+W L + +GH V FSP Y +S D R+
Sbjct: 555 RNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYG---YYFVSGGHDRVARL 611
Query: 357 WDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLA 416
W + Q RI+ +D + C F+ N TGS+D
Sbjct: 612 WATDHYQ-PLRIFAGHLAD-------------------VNCTRFHPNSNYVATGSADRTV 651
Query: 417 RVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS 452
R+W+ N + + +GH+ ++ + FS
Sbjct: 652 RLWDVLNGNC---------VRIFTGHKGPIHSLTFS 678
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN + ++ +V D + +W+ +G+ V TGH + L P N R +
Sbjct: 630 VNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP-NGRFLATGA 688
Query: 603 YDGKTIVWDIWEGIPI 618
DG+ ++WDI G+ +
Sbjct: 689 TDGRVLLWDIGHGLMV 704
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 535 RILPTPRG-VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPF 593
RI +G ++ + +S + RF+ D R+ +W+ G +V L GHT++ L
Sbjct: 663 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR- 721
Query: 594 NPRIAMSAGYDGKTIVWD 611
+ I S D +WD
Sbjct: 722 DGEILASGSMDNTVRLWD 739
>sp|Q5M786|WDR5_XENTR WD repeat-containing protein 5 OS=Xenopus tropicalis GN=wdr5 PE=2
SV=1
Length = 334
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 69/258 (26%), Positives = 113/258 (43%), Gaps = 50/258 (19%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNALV 300
GH AV F +G ++ + S D+L+KIW + GH+ I+D+A SS++ L+
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 102
Query: 301 ASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
SAS+D +++W + G + L+GH+ V F+P+ + +S S D + RIWD +
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI---VSGSFDESVRIWDVK 159
Query: 361 YSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
+ +P SD V+ + FN +G++ V+ S D L R+W+
Sbjct: 160 TGKCLKT--LPAHSDPVSAVH------------------FNRDGSLIVSSSYDGLCRIWD 199
Query: 421 A----CKPNTDDSDQPNHEIDVLSGHENDVNYVQFS-------GCAVASRFSLADSSKED 469
C D D P V++V+FS + + L D SK
Sbjct: 200 TASGQCLKTLIDDDNP------------PVSFVKFSPNGKYILAATLDNTLKLWDYSKG- 246
Query: 470 STPKFKNSWFCHDNIVTC 487
K ++ CH N C
Sbjct: 247 ---KCLKTYTCHKNEKYC 261
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 29/210 (13%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSN 296
K + GH+ + + +++ SDD+ +KIW + + CL + +GH + +
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 297 NALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
+ L+ S S D +R+W + G + L H+ V+A+ F+ R GS+ ++SSS DG CRI
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSL--IVSSSYDGLCRI 197
Query: 357 WDARYSQ-----------------FSPR-IYIPRPS--------DAVAGRNMAPSSSAGP 390
WD Q FSP YI + D G+ + +
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKN 257
Query: 391 QSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
+ + IF G V+GS D L +WN
Sbjct: 258 EKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 232 KMQNIKRVRGHRNAVYCAIFDRS---GRYVITGSDDRLVKIWSMETAYCLASCRGHEGDI 288
K + +K H+N YC + S G+++++GS+D LV IW+++T + +GH +
Sbjct: 245 KGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVV 304
Query: 289 TDLAVSSNNALVASAS--NDCIIRVWR 313
A ++ASA+ ND I++W+
Sbjct: 305 ISTACHPTENIIASAALENDKTIKLWK 331
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G++ + WS D+ +++A D + +W+ + G + +L GH+ + + +P + +S
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSG 147
Query: 602 GYDGKTIVWDIWEG-----IPIRIYEISRF---RDGASIILSDDVGQLYILNTGQGESQK 653
+D +WD+ G +P +S RDG+ I+ S G I +T G+ K
Sbjct: 148 SFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 207
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 251 FDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGD----ITDLAVSSNNALVASASND 306
F +G+Y++ + D +K+W CL + H+ + + +V+ +V S S D
Sbjct: 222 FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIV-SGSED 280
Query: 307 CIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA 359
++ +W L + L+GHT V + A P ++ + +D T ++W +
Sbjct: 281 NLVYIWNLQTKEVVQKLQGHTDVVISTACHPTE-NIIASAALENDKTIKLWKS 332
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 64/288 (22%), Positives = 103/288 (35%), Gaps = 88/288 (30%)
Query: 323 LRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPR--PSDAV--A 378
L GHT AV+++ FSP + L SSS D +IW A +F I + SD +
Sbjct: 41 LAGHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 97
Query: 379 GRNMAPSSSAGP------------------QSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
N+ S+S S+ +FCC FN + V+GS D R+W+
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 421 ACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTPKFKNSWFC 480
+ + L H + V+ V F+ D S
Sbjct: 158 V---------KTGKCLKTLPAHSDPVSAVHFN----------RDGSL------------- 185
Query: 481 HDNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVPPPPMPPQPPRGGPRQRILPTP 540
IV+ S DG IW A+ + PP
Sbjct: 186 ---IVSSSYDGLCRIW--------DTASGQCLKTLIDDDNPP------------------ 216
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVL 588
V+ + +S + +++LAA +D + +W+ + G + + T H Y +
Sbjct: 217 --VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCI 262
>sp|Q6P2Y2|WDR69_XENTR Outer row dynein assembly protein 16 homolog OS=Xenopus tropicalis
GN=wdr69 PE=2 SV=1
Length = 415
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 145/379 (38%), Gaps = 103/379 (27%)
Query: 234 QNIKRVRGHRNAVYCAIFDR-SGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLA 292
+ + + GHRN VY F+ G + TGS D+ K+WS ET C + RGH +I LA
Sbjct: 125 EELHTLEGHRNVVYAIQFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLA 184
Query: 293 VSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
+ + L+A+ S D ++W + G L GH A + +++F+ +L++ S D
Sbjct: 185 FNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGD---RLITGSFDH 241
Query: 353 TCRIWDARYSQFSPRIYIP--RPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTG 410
T +W+ IP R + G SS+ FN + ++ T
Sbjct: 242 TVSVWE-----------IPSGRRIHTLIGHRGEISSA-----------QFNWDCSLIATA 279
Query: 411 SSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDS 470
S D ++W++ + L+GHE++V V F DS
Sbjct: 280 SMDKSCKLWDSLNGKC---------VATLTGHEDEVLDVTF-----------------DS 313
Query: 471 TPKFKNSWFCHDNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVPPPPMPPQPPRG 530
T + + T S DG+A ++ SR+ K
Sbjct: 314 TGQL---------VATASADGTARVYSASSRKCLAKL-------------------EGHE 345
Query: 531 GPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDV 590
G +I +G NR +L A D +WN G + L GHT+ +
Sbjct: 346 GEISKICFNAQG---------NR-ILTASSDKTSRLWNPHTGECLQVLKGHTDEIFSC-- 393
Query: 591 HPFNPRIAMSAGYDGKTIV 609
FN Y+G TI+
Sbjct: 394 -AFN--------YEGNTII 403
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 23/184 (12%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSS 295
I + GHR + A F+ + T S D+ K+W C+A+ GHE ++ D+ S
Sbjct: 254 IHTLIGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNGKCVATLTGHEDEVLDVTFDS 313
Query: 296 NNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
LVA+AS D RV+ ++ L GH ++ I F+ + ++L++S D T R
Sbjct: 314 TGQLVATASADGTARVYSASSRKCLAKLEGHEGEISKICFNAQGN---RILTASSDKTSR 370
Query: 356 IWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTL 415
+W+ P + + + +IF CAFN G +TGS D
Sbjct: 371 LWN------------PHTGECL--------QVLKGHTDEIFSCAFNYEGNTIITGSKDNT 410
Query: 416 ARVW 419
R+W
Sbjct: 411 CRIW 414
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 126/339 (37%), Gaps = 95/339 (28%)
Query: 276 YCLASCRGHEGDITDLAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAF 335
Y R H +T++A + + + + S D +VW G + L GH V AI F
Sbjct: 83 YLFKVLRAHILPLTNVAFNKSGSSFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIQF 142
Query: 336 SPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQI 395
+ G ++ + S D TC++W A + + Y + + +I
Sbjct: 143 NNPYGD--KIATGSFDKTCKLWSAE----TGKCY----------------HTFRGHTAEI 180
Query: 396 FCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCA 455
C AFN T+ TGS DT A++W+ Q E LSGH ++ + F+
Sbjct: 181 VCLAFNPQSTLIATGSMDTTAKLWDI---------QSGEEALTLSGHAAEIISLSFNTTG 231
Query: 456 VASRFSLADSSKEDSTPKFKNSWFCHDNIVTCSRDGSAIIW-IPRSRRSHPKAARWTQAY 514
D ++T S D + +W IP RR H
Sbjct: 232 --------------------------DRLITGSFDHTVSVWEIPSGRRIHT--------- 256
Query: 515 HLKVPPPPMPPQPPRGGPRQRILPTPRG-VNMIVWSLDNRFVLAAIMDCRICVWNAADGS 573
L RG ++ ++ D + A MD +W++ +G
Sbjct: 257 ----------------------LIGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNGK 294
Query: 574 LVHSLTGHTESTYVLDVHPFNP--RIAMSAGYDGKTIVW 610
V +LTGH + VLDV F+ ++ +A DG V+
Sbjct: 295 CVATLTGHEDE--VLDV-TFDSTGQLVATASADGTARVY 330
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 37/78 (47%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSS 295
+ ++ GH + F+ G ++T S D+ ++W+ T CL +GH +I A +
Sbjct: 338 LAKLEGHEGEISKICFNAQGNRILTASSDKTSRLWNPHTGECLQVLKGHTDEIFSCAFNY 397
Query: 296 NNALVASASNDCIIRVWR 313
+ + S D R+WR
Sbjct: 398 EGNTIITGSKDNTCRIWR 415
>sp|Q498M4|WDR5_RAT WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2
SV=1
Length = 334
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 56/196 (28%), Positives = 93/196 (47%), Gaps = 27/196 (13%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNALV 300
GH AV F +G ++ + S D+L+KIW + GH+ I+D+A SS++ L+
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 102
Query: 301 ASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
SAS+D +++W + G + L+GH+ V F+P+ + +S S D + RIWD +
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI---VSGSFDESVRIWDVK 159
Query: 361 YSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
+ +P SD V+ + FN +G++ V+ S D L R+W+
Sbjct: 160 TGKCLKT--LPAHSDPVSAVH------------------FNRDGSLIVSSSYDGLCRIWD 199
Query: 421 A----CKPNTDDSDQP 432
C D D P
Sbjct: 200 TASGQCLKTLIDDDNP 215
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 29/210 (13%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSN 296
K + GH+ + + +++ SDD+ +KIW + + CL + +GH + +
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 297 NALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
+ L+ S S D +R+W + G + L H+ V+A+ F+ R GS+ ++SSS DG CRI
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSL--IVSSSYDGLCRI 197
Query: 357 WDARYSQ-----------------FSPR-IYIPRPS--------DAVAGRNMAPSSSAGP 390
WD Q FSP YI + D G+ + +
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 257
Query: 391 QSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
+ + IF G V+GS D L +WN
Sbjct: 258 EKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 232 KMQNIKRVRGHRNAVYCAIFDRS---GRYVITGSDDRLVKIWSMETAYCLASCRGHEGDI 288
K + +K GH+N YC + S G+++++GS+D LV IW+++T + +GH +
Sbjct: 245 KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
Query: 289 TDLAVSSNNALVASAS--NDCIIRVWR 313
A ++ASA+ ND I++W+
Sbjct: 305 ISTACHPTENIIASAALENDKTIKLWK 331
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 65/288 (22%), Positives = 104/288 (36%), Gaps = 88/288 (30%)
Query: 323 LRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPR--PSDAV--A 378
L GHT AV+++ FSP + L SSS D +IW A +F I + SD +
Sbjct: 41 LAGHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 97
Query: 379 GRNMAPSSSAGP------------------QSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
N+ S+S S+ +FCC FN + V+GS D R+W+
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 421 ACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTPKFKNSWFC 480
+ + L H + V+ V F+ D S
Sbjct: 158 V---------KTGKCLKTLPAHSDPVSAVHFN----------RDGSL------------- 185
Query: 481 HDNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVPPPPMPPQPPRGGPRQRILPTP 540
IV+ S DG IW A+ + PP
Sbjct: 186 ---IVSSSYDGLCRIW--------DTASGQCLKTLIDDDNPP------------------ 216
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVL 588
V+ + +S + +++LAA +D + +W+ + G + + TGH Y +
Sbjct: 217 --VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 262
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Query: 251 FDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGD----ITDLAVSSNNALVASASND 306
F +G+Y++ + D +K+W CL + GH+ + + +V+ +V S S D
Sbjct: 222 FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV-SGSED 280
Query: 307 CIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA 359
++ +W L + L+GHT V + A P ++ + +D T ++W +
Sbjct: 281 NLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE-NIIASAALENDKTIKLWKS 332
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G++ + WS D+ +++A D + +W+ + G + +L GH+ + + +P + +S
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSG 147
Query: 602 GYDGKTIVWDIWEG-----IPIRIYEISRF---RDGASIILSDDVGQLYILNTGQGESQK 653
+D +WD+ G +P +S RDG+ I+ S G I +T G+ K
Sbjct: 148 SFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 207
>sp|P61965|WDR5_MOUSE WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=1 SV=1
Length = 334
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 56/196 (28%), Positives = 93/196 (47%), Gaps = 27/196 (13%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNALV 300
GH AV F +G ++ + S D+L+KIW + GH+ I+D+A SS++ L+
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 102
Query: 301 ASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
SAS+D +++W + G + L+GH+ V F+P+ + +S S D + RIWD +
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI---VSGSFDESVRIWDVK 159
Query: 361 YSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
+ +P SD V+ + FN +G++ V+ S D L R+W+
Sbjct: 160 TGKCLKT--LPAHSDPVSAVH------------------FNRDGSLIVSSSYDGLCRIWD 199
Query: 421 A----CKPNTDDSDQP 432
C D D P
Sbjct: 200 TASGQCLKTLIDDDNP 215
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 29/210 (13%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSN 296
K + GH+ + + +++ SDD+ +KIW + + CL + +GH + +
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 297 NALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
+ L+ S S D +R+W + G + L H+ V+A+ F+ R GS+ ++SSS DG CRI
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSL--IVSSSYDGLCRI 197
Query: 357 WDARYSQ-----------------FSPR-IYIPRPS--------DAVAGRNMAPSSSAGP 390
WD Q FSP YI + D G+ + +
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 257
Query: 391 QSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
+ + IF G V+GS D L +WN
Sbjct: 258 EKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 232 KMQNIKRVRGHRNAVYCAIFDRS---GRYVITGSDDRLVKIWSMETAYCLASCRGHEGDI 288
K + +K GH+N YC + S G+++++GS+D LV IW+++T + +GH +
Sbjct: 245 KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
Query: 289 TDLAVSSNNALVASAS--NDCIIRVWR 313
A ++ASA+ ND I++W+
Sbjct: 305 ISTACHPTENIIASAALENDKTIKLWK 331
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 65/288 (22%), Positives = 104/288 (36%), Gaps = 88/288 (30%)
Query: 323 LRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPR--PSDAV--A 378
L GHT AV+++ FSP + L SSS D +IW A +F I + SD +
Sbjct: 41 LAGHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 97
Query: 379 GRNMAPSSSAGP------------------QSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
N+ S+S S+ +FCC FN + V+GS D R+W+
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 421 ACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTPKFKNSWFC 480
+ + L H + V+ V F+ D S
Sbjct: 158 V---------KTGKCLKTLPAHSDPVSAVHFN----------RDGSL------------- 185
Query: 481 HDNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVPPPPMPPQPPRGGPRQRILPTP 540
IV+ S DG IW A+ + PP
Sbjct: 186 ---IVSSSYDGLCRIW--------DTASGQCLKTLIDDDNPP------------------ 216
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVL 588
V+ + +S + +++LAA +D + +W+ + G + + TGH Y +
Sbjct: 217 --VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 262
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Query: 251 FDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGD----ITDLAVSSNNALVASASND 306
F +G+Y++ + D +K+W CL + GH+ + + +V+ +V S S D
Sbjct: 222 FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV-SGSED 280
Query: 307 CIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA 359
++ +W L + L+GHT V + A P ++ + +D T ++W +
Sbjct: 281 NLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE-NIIASAALENDKTIKLWKS 332
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G++ + WS D+ +++A D + +W+ + G + +L GH+ + + +P + +S
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSG 147
Query: 602 GYDGKTIVWDIWEG-----IPIRIYEISRF---RDGASIILSDDVGQLYILNTGQGESQK 653
+D +WD+ G +P +S RDG+ I+ S G I +T G+ K
Sbjct: 148 SFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 207
>sp|P61964|WDR5_HUMAN WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1
Length = 334
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 56/196 (28%), Positives = 93/196 (47%), Gaps = 27/196 (13%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNALV 300
GH AV F +G ++ + S D+L+KIW + GH+ I+D+A SS++ L+
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 102
Query: 301 ASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
SAS+D +++W + G + L+GH+ V F+P+ + +S S D + RIWD +
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI---VSGSFDESVRIWDVK 159
Query: 361 YSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
+ +P SD V+ + FN +G++ V+ S D L R+W+
Sbjct: 160 TGKCLKT--LPAHSDPVSAVH------------------FNRDGSLIVSSSYDGLCRIWD 199
Query: 421 A----CKPNTDDSDQP 432
C D D P
Sbjct: 200 TASGQCLKTLIDDDNP 215
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 29/210 (13%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSN 296
K + GH+ + + +++ SDD+ +KIW + + CL + +GH + +
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 297 NALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
+ L+ S S D +R+W + G + L H+ V+A+ F+ R GS+ ++SSS DG CRI
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSL--IVSSSYDGLCRI 197
Query: 357 WDARYSQ-----------------FSPR-IYIPRPS--------DAVAGRNMAPSSSAGP 390
WD Q FSP YI + D G+ + +
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 257
Query: 391 QSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
+ + IF G V+GS D L +WN
Sbjct: 258 EKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 232 KMQNIKRVRGHRNAVYCAIFDRS---GRYVITGSDDRLVKIWSMETAYCLASCRGHEGDI 288
K + +K GH+N YC + S G+++++GS+D LV IW+++T + +GH +
Sbjct: 245 KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
Query: 289 TDLAVSSNNALVASAS--NDCIIRVWR 313
A ++ASA+ ND I++W+
Sbjct: 305 ISTACHPTENIIASAALENDKTIKLWK 331
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 65/288 (22%), Positives = 104/288 (36%), Gaps = 88/288 (30%)
Query: 323 LRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPR--PSDAV--A 378
L GHT AV+++ FSP + L SSS D +IW A +F I + SD +
Sbjct: 41 LAGHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 97
Query: 379 GRNMAPSSSAGP------------------QSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
N+ S+S S+ +FCC FN + V+GS D R+W+
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 421 ACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTPKFKNSWFC 480
+ + L H + V+ V F+ D S
Sbjct: 158 V---------KTGKCLKTLPAHSDPVSAVHFN----------RDGSL------------- 185
Query: 481 HDNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVPPPPMPPQPPRGGPRQRILPTP 540
IV+ S DG IW A+ + PP
Sbjct: 186 ---IVSSSYDGLCRIW--------DTASGQCLKTLIDDDNPP------------------ 216
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVL 588
V+ + +S + +++LAA +D + +W+ + G + + TGH Y +
Sbjct: 217 --VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 262
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Query: 251 FDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGD----ITDLAVSSNNALVASASND 306
F +G+Y++ + D +K+W CL + GH+ + + +V+ +V S S D
Sbjct: 222 FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV-SGSED 280
Query: 307 CIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA 359
++ +W L + L+GHT V + A P ++ + +D T ++W +
Sbjct: 281 NLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE-NIIASAALENDKTIKLWKS 332
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G++ + WS D+ +++A D + +W+ + G + +L GH+ + + +P + +S
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSG 147
Query: 602 GYDGKTIVWDIWEG-----IPIRIYEISRF---RDGASIILSDDVGQLYILNTGQGESQK 653
+D +WD+ G +P +S RDG+ I+ S G I +T G+ K
Sbjct: 148 SFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 207
>sp|Q2KIG2|WDR5_BOVIN WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1
Length = 334
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 56/196 (28%), Positives = 93/196 (47%), Gaps = 27/196 (13%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNALV 300
GH AV F +G ++ + S D+L+KIW + GH+ I+D+A SS++ L+
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 102
Query: 301 ASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
SAS+D +++W + G + L+GH+ V F+P+ + +S S D + RIWD +
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI---VSGSFDESVRIWDVK 159
Query: 361 YSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
+ +P SD V+ + FN +G++ V+ S D L R+W+
Sbjct: 160 TGKCLKT--LPAHSDPVSAVH------------------FNRDGSLIVSSSYDGLCRIWD 199
Query: 421 A----CKPNTDDSDQP 432
C D D P
Sbjct: 200 TASGQCLKTLIDDDNP 215
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 29/210 (13%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSN 296
K + GH+ + + +++ SDD+ +KIW + + CL + +GH + +
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 297 NALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
+ L+ S S D +R+W + G + L H+ V+A+ F+ R GS+ ++SSS DG CRI
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSL--IVSSSYDGLCRI 197
Query: 357 WDARYSQ-----------------FSPR-IYIPRPS--------DAVAGRNMAPSSSAGP 390
WD Q FSP YI + D G+ + +
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 257
Query: 391 QSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
+ + IF G V+GS D L +WN
Sbjct: 258 EKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 232 KMQNIKRVRGHRNAVYCAIFDRS---GRYVITGSDDRLVKIWSMETAYCLASCRGHEGDI 288
K + +K GH+N YC + S G+++++GS+D LV IW+++T + +GH +
Sbjct: 245 KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
Query: 289 TDLAVSSNNALVASAS--NDCIIRVWR 313
A ++ASA+ ND I++W+
Sbjct: 305 ISTACHPTENIIASAALENDKTIKLWK 331
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 65/288 (22%), Positives = 104/288 (36%), Gaps = 88/288 (30%)
Query: 323 LRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPR--PSDAV--A 378
L GHT AV+++ FSP + L SSS D +IW A +F I + SD +
Sbjct: 41 LAGHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 97
Query: 379 GRNMAPSSSAGP------------------QSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
N+ S+S S+ +FCC FN + V+GS D R+W+
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 421 ACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTPKFKNSWFC 480
+ + L H + V+ V F+ D S
Sbjct: 158 V---------KTGKCLKTLPAHSDPVSAVHFN----------RDGSL------------- 185
Query: 481 HDNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVPPPPMPPQPPRGGPRQRILPTP 540
IV+ S DG IW A+ + PP
Sbjct: 186 ---IVSSSYDGLCRIW--------DTASGQCLKTLIDDDNPP------------------ 216
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVL 588
V+ + +S + +++LAA +D + +W+ + G + + TGH Y +
Sbjct: 217 --VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 262
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Query: 251 FDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGD----ITDLAVSSNNALVASASND 306
F +G+Y++ + D +K+W CL + GH+ + + +V+ +V S S D
Sbjct: 222 FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV-SGSED 280
Query: 307 CIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDA 359
++ +W L + L+GHT V + A P ++ + +D T ++W +
Sbjct: 281 NLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE-NIIASAALENDKTIKLWKS 332
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G++ + WS D+ +++A D + +W+ + G + +L GH+ + + +P + +S
Sbjct: 89 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSG 147
Query: 602 GYDGKTIVWDIWEG-----IPIRIYEISRF---RDGASIILSDDVGQLYILNTGQGESQK 653
+D +WD+ G +P +S RDG+ I+ S G I +T G+ K
Sbjct: 148 SFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 207
>sp|P87053|POF1_SCHPO F-box/WD repeat-containing protein pof1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pof1 PE=1 SV=1
Length = 605
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 106/248 (42%), Gaps = 39/248 (15%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
+ Q + + GH + V C FD+ +I+GS D+ ++IW+ T+ C++ GH +
Sbjct: 300 LATFQQVALLEGHSSGVTCLQFDQCK--LISGSMDKTIRIWNYRTSECISILHGHTDSV- 356
Query: 290 DLAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
L ++ ++ L+ S S DC +++W G I+ LRGHT V ++ G V LS S
Sbjct: 357 -LCLTFDSTLLVSGSADCTVKLWHFSGGKRIT-LRGHTGPVNSVRIIRDRGLV---LSGS 411
Query: 350 DDGTCRIW----DARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQS----------HQI 395
DD T +IW + FS I P S A+A + S G H +
Sbjct: 412 DDSTIKIWSLETNTCLHTFSAHIG-PVQSLALADSRLFSCSLDGTIKQWDIEKKKCVHTL 470
Query: 396 F-----CCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQ 450
F A+ ++G+ D + +VW AC+ + L H V V
Sbjct: 471 FGHIEGVWEIAADHLRLISGAHDGVVKVWEACEC-----------VHTLKNHSEPVTSVA 519
Query: 451 FSGCAVAS 458
C V S
Sbjct: 520 LGDCEVVS 527
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 123/334 (36%), Gaps = 99/334 (29%)
Query: 283 GHEGDITDLAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSV 342
GH + L + N ++AS S D IR+W L +++L GH++ VT + F
Sbjct: 271 GHSDGVMCLQLVRN--ILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQ----- 323
Query: 343 YQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNA 402
+L+S S D T RIW+ R S+ ++ + + C F++
Sbjct: 324 CKLISGSMDKTIRIWNYRTSECISILH--------------------GHTDSVLCLTFDS 363
Query: 403 NGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSL 462
T+ V+GS+D ++W+ + L GH VN V+ + L
Sbjct: 364 --TLLVSGSADCTVKLWHF----------SGGKRITLRGHTGPVNSVR-----IIRDRGL 406
Query: 463 ADSSKEDSTPKFKNSWFCHDNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVPPPP 522
S +DST K W N TC SA I
Sbjct: 407 VLSGSDDSTIKI---WSLETN--TCLHTFSAHI--------------------------- 434
Query: 523 MPPQPPRGGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHT 582
GP Q + +L + + + +D I W+ VH+L GH
Sbjct: 435 --------GPVQSL------------ALADSRLFSCSLDGTIKQWDIEKKKCVHTLFGHI 474
Query: 583 ESTYVLDVHPFNPRIAMSAGYDGKTIVWDIWEGI 616
E + ++ + R+ +S +DG VW+ E +
Sbjct: 475 EGVW--EIAADHLRL-ISGAHDGVVKVWEACECV 505
>sp|C3XVT5|LIS1_BRAFL Lissencephaly-1 homolog OS=Branchiostoma floridae
GN=BRAFLDRAFT_59218 PE=3 SV=1
Length = 406
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 231 QKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
Q +NIK + GH + V F +G ++I+ S D+ +K+W + T YC+ + GH +
Sbjct: 178 QTFENIKTMHGHDHNVSSVHFMPNGDFLISASRDKTIKMWELATGYCVKTFTGHREWVRT 237
Query: 291 LAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRP--GSVYQ---- 344
+ V+ + +L+AS SND +RVW + + + LR H V IA++P G V +
Sbjct: 238 VRVNQDGSLLASCSNDQTVRVWVVANKECKAELREHEHVVECIAWAPESCNGHVSEVMGA 297
Query: 345 ---------LLSSSDDGTCRIWD----------------ARYSQFSP-RIYIPRPSDAVA 378
LLS S D T ++WD R + P YI SD
Sbjct: 298 EKKGRSGPFLLSGSRDKTIKMWDISTGVCIMTLVGHDNWVRGVVWHPGGKYIISASDDKT 357
Query: 379 GRNM---APSSSAGPQSHQIFCCA--FNANGTVFVTGSSDTLARVW 419
R ++HQ FC + F+ + +TGS D +VW
Sbjct: 358 IRVWDYKNKRCQKTLEAHQHFCTSIDFHRSAPYVITGSVDQTVKVW 403
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 5/184 (2%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSN 296
+ ++GH +AV FD+ G+ + + S D +K+W +T + + GH+ +++ + N
Sbjct: 142 RTLKGHTDAVQDVSFDQQGKLLASCSADMTIKLWDFQTFENIKTMHGHDHNVSSVHFMPN 201
Query: 297 NALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
+ SAS D I++W L G + GH V + + + GS+ L S S+D T R+
Sbjct: 202 GDFLISASRDKTIKMWELATGYCVKTFTGHREWVRTVRVN-QDGSL--LASCSNDQTVRV 258
Query: 357 WDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLA 416
W + + V AP S G S + +G ++GS D
Sbjct: 259 WVVANKECKAE--LREHEHVVECIAWAPESCNGHVSEVMGAEKKGRSGPFLLSGSRDKTI 316
Query: 417 RVWN 420
++W+
Sbjct: 317 KMWD 320
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNALV 300
GHR+ + +F +++ S+D +KIW ET + +GH + D++ L+
Sbjct: 104 GHRSPITRVLFHPVYSVMVSASEDATIKIWDYETGDFERTLKGHTDAVQDVSFDQQGKLL 163
Query: 301 ASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
AS S D I++W I + GH V+++ F P L+S+S D T ++W+
Sbjct: 164 ASCSADMTIKLWDFQTFENIKTMHGHDHNVSSVHFMPNGDF---LISASRDKTIKMWE 218
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 253 RSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNALVASASNDCIIRVW 312
RSG ++++GS D+ +K+W + T C+ + GH+ + + + SAS+D IRVW
Sbjct: 302 RSGPFLLSGSRDKTIKMWDISTGVCIMTLVGHDNWVRGVVWHPGGKYIISASDDKTIRVW 361
Query: 313 RLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
+ L H T+I F S +++ S D T ++W+ R
Sbjct: 362 DYKNKRCQKTLEAHQHFCTSIDFHR---SAPYVITGSVDQTVKVWECR 406
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 113/311 (36%), Gaps = 72/311 (23%)
Query: 323 LRGHTAAVTAIAFSPRPGSVYQLL-SSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRN 381
L GH + +T + F P VY ++ S+S+D T +IWD F + +DAV
Sbjct: 102 LSGHRSPITRVLFHP----VYSVMVSASEDATIKIWDYETGDFERT--LKGHTDAVQD-- 153
Query: 382 MAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSG 441
+F+ G + + S+D ++W+ Q I + G
Sbjct: 154 ----------------VSFDQQGKLLASCSADMTIKLWDF---------QTFENIKTMHG 188
Query: 442 HENDVNYVQFSGCAVASRFSLADSSKEDSTPKFKN--SWFCHDN---------------- 483
H+++V+ V F S+ D T K + +C
Sbjct: 189 HDHNVSSVHF-----MPNGDFLISASRDKTIKMWELATGYCVKTFTGHREWVRTVRVNQD 243
Query: 484 ---IVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVPPPPMPPQPPRGGPRQRILPTP 540
+ +CS D + +W+ ++ A + H+ V P+ G + +
Sbjct: 244 GSLLASCSNDQTVRVWVVANKEC---KAELREHEHV-VECIAWAPESCNGHVSEVMGAEK 299
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
+G + F+L+ D I +W+ + G + +L GH + HP I +S
Sbjct: 300 KGRS-------GPFLLSGSRDKTIKMWDISTGVCIMTLVGHDNWVRGVVWHPGGKYI-IS 351
Query: 601 AGYDGKTIVWD 611
A D VWD
Sbjct: 352 ASDDKTIRVWD 362
>sp|Q55563|Y163_SYNY3 Uncharacterized WD repeat-containing protein sll0163 OS=Synechocystis
sp. (strain PCC 6803 / Kazusa) GN=sll0163 PE=4 SV=1
Length = 1693
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 151/385 (39%), Gaps = 75/385 (19%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNA 298
+ GH + V A F+ G ++T S D+ ++W+ E C+A H+G + + S +
Sbjct: 1338 LTGHSHWVRNAHFNPKGDRLLTVSRDKTARLWTTE-GECVAVLADHQGWVREGQFSPDGQ 1396
Query: 299 LVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
+ + S D ++W + G ++VLRGH AV + FSP S Y ++++S DGT R+W+
Sbjct: 1397 WIVTGSADKTAQLWNVL-GKKLTVLRGHQDAVLNVRFSP--DSQY-IVTASKDGTARVWN 1452
Query: 359 ARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARV 418
GR +A IF F+A+G VT S D A +
Sbjct: 1453 N------------------TGRELAVLRHY---EKNIFAAEFSADGQFIVTASDDNTAGI 1491
Query: 419 WNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTPKFKNSW 478
W E+ + GHE V + QFS ADS
Sbjct: 1492 WEIV----------GREVGICRGHEGPVYFAQFS----------ADSRY----------- 1520
Query: 479 FCHDNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVPPPP----------MPPQPP 528
I+T S D +A IW R A + Y + P
Sbjct: 1521 -----ILTASVDNTARIWDFLGRPLLTLAGHQSIVYQARFSPEGNLIATVSADHTARLWD 1575
Query: 529 RGGPRQRILPTPRG-VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYV 587
R G +L +G V + WS D + ++ A D +W+ + L+ +L GH
Sbjct: 1576 RSGKTVAVLYGHQGLVGTVDWSPDGQMLVTASNDGTARLWDLSGRELL-TLEGHGNWVRS 1634
Query: 588 LDVHPFNPRIAMSAGYDGKTIVWDI 612
+ P + R +++ DG +W +
Sbjct: 1635 AEFSP-DGRWVLTSSADGTAKLWPV 1658
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 124/301 (41%), Gaps = 56/301 (18%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAV 293
+ + +RGH + V F ++++T D +IW+ L C+GH + +
Sbjct: 1087 EEVATLRGHEDWVRSVHFSPHHQFLVTSGQDNTARIWNF-AGEQLTLCQGHADWVRNAEF 1145
Query: 294 SSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
+ + ++ +AS D R+W L +G I + +GHT+ V FSP + ++ S DGT
Sbjct: 1146 NCHGQILLTASRDGTARLWDL-EGREIGLCQGHTSWVRNAQFSPDGQWI---VTCSADGT 1201
Query: 354 CRIWDARYSQFSP----RIYIPRPSDAVAGRNMAPSSSAGP----------------QSH 393
R+WD F+ + ++ + G+++ SSS G H
Sbjct: 1202 ARLWDLSSQCFAVLKGHQNWVNNALWSPDGQHIITSSSDGTARVWSRHGKCLGTLRGHDH 1261
Query: 394 QIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSG 453
I F+ +G VT S+D AR+W + + +L GH+ +V FS
Sbjct: 1262 NIHGARFSLDGQKIVTYSTDNTARLWT----------KEGTLLTILRGHQKEVYDADFSA 1311
Query: 454 CAVASRFSLA----------DSSKEDSTPKFKNSWFCH--------DNIVTCSRDGSAII 495
RF D S++D+ +S + D ++T SRD +A +
Sbjct: 1312 ---DGRFVFTVSADQTARQWDISQKDTITLTGHSHWVRNAHFNPKGDRLLTVSRDKTARL 1368
Query: 496 W 496
W
Sbjct: 1369 W 1369
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 108/237 (45%), Gaps = 35/237 (14%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSS 295
I +RGH+ A+ + G+Y T S D VK+W +A+ RGHE + + S
Sbjct: 1048 INVLRGHQEAITALDWSADGQYFATASADHTVKLWQRHGEE-VATLRGHEDWVRSVHFSP 1106
Query: 296 NNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
++ + ++ D R+W G +++ +GH V F+ G + LL++S DGT R
Sbjct: 1107 HHQFLVTSGQDNTARIWNFA-GEQLTLCQGHADWVRNAEFNCH-GQI--LLTASRDGTAR 1162
Query: 356 IWD---------------ARYSQFSP--RIYIPRPSDAVAGR-NMAPSSSAGPQSHQIFC 397
+WD R +QFSP + + +D A +++ A + HQ +
Sbjct: 1163 LWDLEGREIGLCQGHTSWVRNAQFSPDGQWIVTCSADGTARLWDLSSQCFAVLKGHQNWV 1222
Query: 398 --CAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS 452
++ +G +T SSD ARVW+ + + L GH+++++ +FS
Sbjct: 1223 NNALWSPDGQHIITSSSDGTARVWS----------RHGKCLGTLRGHDHNIHGARFS 1269
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 20/176 (11%)
Query: 199 GLREIGG---GFTRHHRAPSIRAACYAIAKPSTMVQKMQNIKRV-----------RGHRN 244
G+ EI G G R H P + A ++ + + N R+ GH++
Sbjct: 1490 GIWEIVGREVGICRGHEGP-VYFAQFSADSRYILTASVDNTARIWDFLGRPLLTLAGHQS 1548
Query: 245 AVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNALVASAS 304
VY A F G + T S D ++W + +A GH+G + + S + ++ +AS
Sbjct: 1549 IVYQARFSPEGNLIATVSADHTARLWD-RSGKTVAVLYGHQGLVGTVDWSPDGQMLVTAS 1607
Query: 305 NDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
ND R+W L G + L GH V + FSP V L+SS DGT ++W +
Sbjct: 1608 NDGTARLWDL-SGRELLTLEGHGNWVRSAEFSPDGRWV---LTSSADGTAKLWPVK 1659
>sp|Q17963|TG125_CAEEL WD repeat-containing protein tag-125 OS=Caenorhabditis elegans
GN=tag-125 PE=4 SV=1
Length = 376
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 23/182 (12%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNA 298
+ GH ++ A F G+Y+ T S D+ VKIW+M+ C + GH+ + D+A SS++
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSR 142
Query: 299 LVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
V SAS+D ++++ + L+GH V F+P+ V +S S D + RIWD
Sbjct: 143 CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLV---VSGSFDESVRIWD 199
Query: 359 ARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARV 418
+ +P SD V+ +FN +G++ +GS D L R+
Sbjct: 200 VKTGMCIKT--LPAHSDPVSA------------------VSFNRDGSLIASGSYDGLVRI 239
Query: 419 WN 420
W+
Sbjct: 240 WD 241
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 30/211 (14%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSN 296
K ++GH N V+C F+ V++GS D V+IW ++T C+ + H ++ ++ + +
Sbjct: 165 KTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRD 224
Query: 297 NALVASASNDCIIRVWRLPDGLPISVLR-GHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
+L+AS S D ++R+W +G I L V + FSP +L+S+ D T +
Sbjct: 225 GSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGK---YILASNLDSTLK 281
Query: 356 IWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTL 415
+WD FS G+ + + + IF G ++GS D
Sbjct: 282 LWD-----FS------------KGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCK 324
Query: 416 ARVWNACKPNTDDSDQPNHEIDVLSGHENDV 446
+WN Q + L GH V
Sbjct: 325 IYIWNL---------QTREIVQCLEGHTQPV 346
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 3/127 (2%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSN 296
+ + GH+ V + R V++ SDD+ +KI+ + T+ + +GH + +
Sbjct: 123 RTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQ 182
Query: 297 NALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
++LV S S D +R+W + G+ I L H+ V+A++F+ R GS+ + S S DG RI
Sbjct: 183 SSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFN-RDGSL--IASGSYDGLVRI 239
Query: 357 WDARYSQ 363
WD Q
Sbjct: 240 WDTANGQ 246
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 34/183 (18%)
Query: 278 LASCRGHEGDITDLAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSP 337
+ + GH I+ S + ++S D +++W + + L GH V IA+S
Sbjct: 80 MCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSS 139
Query: 338 RPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFC 397
V +S+SDD T +I++ I R + + G N + +FC
Sbjct: 140 DSRCV---VSASDDKTLKIFE---------IVTSRMTKTLKGHN-----------NYVFC 176
Query: 398 CAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS--GCA 455
C FN ++ V+GS D R+W+ + I L H + V+ V F+ G
Sbjct: 177 CNFNPQSSLVVSGSFDESVRIWDV---------KTGMCIKTLPAHSDPVSAVSFNRDGSL 227
Query: 456 VAS 458
+AS
Sbjct: 228 IAS 230
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 13/122 (10%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPR--IAM 599
GVN I WS D+R V++A D + ++ + +L GH + + FNP+ + +
Sbjct: 131 GVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCN---FNPQSSLVV 187
Query: 600 SAGYDGKTIVWDIWEGIPIR--------IYEISRFRDGASIILSDDVGQLYILNTGQGES 651
S +D +WD+ G+ I+ + +S RDG+ I G + I +T G+
Sbjct: 188 SGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQC 247
Query: 652 QK 653
K
Sbjct: 248 IK 249
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 5/134 (3%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEG-DI 288
V+ IK + H + V F+R G + +GS D LV+IW C+ + E +
Sbjct: 200 VKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPV 259
Query: 289 TDLAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIA--FSPRPGSVYQLL 346
+ S N + +++ D +++W G + GH + I FS G ++
Sbjct: 260 AFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGK--WII 317
Query: 347 SSSDDGTCRIWDAR 360
S S+D IW+ +
Sbjct: 318 SGSEDCKIYIWNLQ 331
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 232 KMQNIKRVRGHRNAVYCAIFDRS---GRYVITGSDDRLVKIWSMETAYCLASCRGHEGDI 288
K + +K+ GH N+ YC + S G+++I+GS+D + IW+++T + GH +
Sbjct: 287 KGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPV 346
Query: 289 TDLAVSSNNALVASAS--NDCIIRVWR 313
++AS + D I +WR
Sbjct: 347 LASDCHPVQNIIASGALEPDNKIHIWR 373
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
Query: 251 FDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGD----ITDLAVSSNNALVASASND 306
F +G+Y++ + D +K+W L GHE + +V+ ++ S S D
Sbjct: 264 FSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWII-SGSED 322
Query: 307 CIIRVWRLPDGLPISVLRGHTAAVTA 332
C I +W L + L GHT V A
Sbjct: 323 CKIYIWNLQTREIVQCLEGHTQPVLA 348
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 553 RFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA-GYDGKTIVW 610
+++++ DC+I +WN +V L GHT+ D HP IA A D K +W
Sbjct: 314 KWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
>sp|Q8C092|TAF5_MOUSE Transcription initiation factor TFIID subunit 5 OS=Mus musculus
GN=Taf5 PE=2 SV=1
Length = 801
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 66/126 (52%), Gaps = 3/126 (2%)
Query: 234 QNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAV 293
Q ++ GH V C + + YV TGS DR V++W + C+ GH+G I L
Sbjct: 619 QPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTF 678
Query: 294 SSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGT 353
S N +A+ + D + +W + GL + L+GHT V ++ FS R G + L S S D T
Sbjct: 679 SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS-RDGEI--LASGSMDNT 735
Query: 354 CRIWDA 359
R+WDA
Sbjct: 736 VRLWDA 741
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 27/215 (12%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSS 295
+K + GH VY A F Y+++ S+D V++WS++T CL +GH + D S
Sbjct: 537 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 596
Query: 296 NNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
S +D + R+W P+ + GH A V + P V + S D T R
Sbjct: 597 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYV---ATGSADRTVR 653
Query: 356 IWDARYSQFSPRIY------IPRPSDAVAGRNMAPSSSAG---------------PQSHQ 394
+WD RI+ I + + GR +A ++ G + H
Sbjct: 654 LWDVLNGN-CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHT 712
Query: 395 IFCCA--FNANGTVFVTGSSDTLARVWNACKPNTD 427
C+ F+ +G + +GS D R+W+A K D
Sbjct: 713 DTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFED 747
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 85/216 (39%), Gaps = 39/216 (18%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSN 296
K++R + A ++ D+ SDD L +I +TA L GH G + + S +
Sbjct: 503 KKLRSVKQASDLSLIDKE-------SDDVLERIMDEKTASELKILYGHSGPVYGASFSPD 555
Query: 297 NALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
+ S+S D +R+W L + +GH V FSP Y +S D R+
Sbjct: 556 RNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYG---YYFVSGGHDRVARL 612
Query: 357 WDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLA 416
W + Q RI+ +D + C ++ N TGS+D
Sbjct: 613 WATDHYQ-PLRIFAGHLAD-------------------VNCTRYHPNSNYVATGSADRTV 652
Query: 417 RVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFS 452
R+W+ N + + +GH+ ++ + FS
Sbjct: 653 RLWDVLNGNC---------VRIFTGHKGPIHSLTFS 679
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
VN + ++ +V D + +W+ +G+ V TGH + L P N R +
Sbjct: 631 VNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP-NGRFLATGA 689
Query: 603 YDGKTIVWDIWEGIPI 618
DG+ ++WDI G+ +
Sbjct: 690 TDGRVLLWDIGHGLMV 705
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 535 RILPTPRG-VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPF 593
RI +G ++ + +S + RF+ D R+ +W+ G +V L GHT++ L
Sbjct: 664 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR- 722
Query: 594 NPRIAMSAGYDGKTIVWD 611
+ I S D +WD
Sbjct: 723 DGEILASGSMDNTVRLWD 740
>sp|O22212|PRP4L_ARATH U4/U6 small nuclear ribonucleoprotein PRP4-like protein
OS=Arabidopsis thaliana GN=EMB2776 PE=2 SV=1
Length = 554
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 26/226 (11%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSS 295
++ GH + + F SG+Y+ T S D+ ++W + T L GH + +A
Sbjct: 332 LQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQ 391
Query: 296 NNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
+ AL AS D + RVW L G I V +GH V ++ FSP + Y L S +D CR
Sbjct: 392 DGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSP---NGYHLASGGEDNQCR 448
Query: 356 IWDARYSQ-----------FSPRIYIPRPSDAVA------------GRNMAPSSSAGPQS 392
IWD R + S Y P+ +A GR+ + S
Sbjct: 449 IWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHE 508
Query: 393 HQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDV 438
++ A+ + T S D ++W + + +D ++ +ID+
Sbjct: 509 SKVASLDITADSSCIATVSHDRTIKLWTSSGNDDEDEEKETMDIDL 554
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 130/363 (35%), Gaps = 93/363 (25%)
Query: 251 FDRSGRYVITGSDDRLVKIWSM-ETAYCLASCRGHEGDITDLAVSSNNALVASASNDCII 309
F R G+ + T S + K+W M + +A + H+ TD+ S + +A+AS D
Sbjct: 263 FSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTA 322
Query: 310 RVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIY 369
++W+ DG + GH + +AF P S L ++S D T R+WD
Sbjct: 323 KLWK-TDGTLLQTFEGHLDRLARVAFHP---SGKYLGTTSYDKTWRLWDIN--------- 369
Query: 370 IPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWNACKPNTDDS 429
G + S ++ AF +G + + D+LARVW+
Sbjct: 370 --------TGAELLLQEG---HSRSVYGIAFQQDGALAASCGLDSLARVWDL-------- 410
Query: 430 DQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTPKFKNSWFCHDNIVTCSR 489
+ I V GH V V FS N + ++ +
Sbjct: 411 -RTGRSILVFQGHIKPVFSVNFS----------------------PNGY----HLASGGE 443
Query: 490 DGSAIIWIPRSRRSHPKAARWTQAYHLKVPPPPMPPQPPRGGPRQRILPTPRG-VNMIVW 548
D IW R R+S I+P V+ + +
Sbjct: 444 DNQCRIWDLRMRKS------------------------------LYIIPAHANLVSQVKY 473
Query: 549 SLDNRFVLA-AIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGKT 607
+ LA A D ++ +W+ D SLV SL GH LD+ + IA + +D
Sbjct: 474 EPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIA-TVSHDRTI 532
Query: 608 IVW 610
+W
Sbjct: 533 KLW 535
>sp|Q23256|YH92_CAEEL Uncharacterized WD repeat-containing protein ZC302.2
OS=Caenorhabditis elegans GN=ZC302.2 PE=4 SV=1
Length = 501
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 115/284 (40%), Gaps = 58/284 (20%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSS 295
+K + GH +V F G+Y+ TGS D+ +K+W+ L + H+ I D + SS
Sbjct: 206 VKTISGHTKSVSVIKFSYCGKYLGTGSADKQIKVWNTVDMTYLQTLASHQLGINDFSWSS 265
Query: 296 NNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
N+ +ASAS+D ++++ + G + +RGHT V +F+P+ + S+ D T R
Sbjct: 266 NSQFIASASDDTTVKIFDVISGACLRTMRGHTNYVFCCSFNPQSSLI---ASAGFDETVR 322
Query: 356 IWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTL 415
+WD + IP SD + ++N +G T S D
Sbjct: 323 VWDFKTGLCVK--CIPAHSDPITS------------------ISYNHDGNTMATSSYDGC 362
Query: 416 ARVWNA----CKPNTDDSDQPNHEIDVLSGHENDVNYVQFS-------GCAVASRFSLAD 464
RVW+A C D+D V +V FS + S L D
Sbjct: 363 IRVWDAASGSCLKTLVDTD------------HAPVTFVCFSPNGKYLLSAQLDSSLKLWD 410
Query: 465 SSKEDSTPKF---KNSWFC---------HDNIVTCSRDGSAIIW 496
K + KN +C +I++ S DG ++W
Sbjct: 411 PKKAKPLKYYNGHKNKKYCLFANMSVPLGKHIISGSEDGRILVW 454
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 69/127 (54%), Gaps = 3/127 (2%)
Query: 233 MQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLA 292
M ++ + H+ + + + +++ + SDD VKI+ + + CL + RGH + +
Sbjct: 245 MTYLQTLASHQLGINDFSWSSNSQFIASASDDTTVKIFDVISGACLRTMRGHTNYVFCCS 304
Query: 293 VSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
+ ++L+ASA D +RVW GL + + H+ +T+I+++ G+ + +SS DG
Sbjct: 305 FNPQSSLIASAGFDETVRVWDFKTGLCVKCIPAHSDPITSISYN-HDGNT--MATSSYDG 361
Query: 353 TCRIWDA 359
R+WDA
Sbjct: 362 CIRVWDA 368
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 231 QKMQNIKRVRGHRNAVYCAIFDRS---GRYVITGSDDRLVKIWSMETAYCLASCRGHEGD 287
+K + +K GH+N YC + S G+++I+GS+D + +WS++T + GH
Sbjct: 412 KKAKPLKYYNGHKNKKYCLFANMSVPLGKHIISGSEDGRILVWSIQTKQIVQILEGHTTP 471
Query: 288 ITDLAVSSNNALVASASN----DCIIRVWR 313
+ LA S+ L AS D +IR+WR
Sbjct: 472 V--LATDSHPTLNIIASGGLEPDNVIRIWR 499
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 542 GVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMSA 601
G+N WS +++F+ +A D + +++ G+ + ++ GHT + +P + IA SA
Sbjct: 257 GINDFSWSSNSQFIASASDDTTVKIFDVISGACLRTMRGHTNYVFCCSFNPQSSLIA-SA 315
Query: 602 GYDGKTIVWDIWEGIPIR--------IYEISRFRDGASIILSDDVGQLYILNTGQGESQK 653
G+D VWD G+ ++ I IS DG ++ S G + + + G K
Sbjct: 316 GFDETVRVWDFKTGLCVKCIPAHSDPITSISYNHDGNTMATSSYDGCIRVWDAASGSCLK 375
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 10/118 (8%)
Query: 246 VYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNAL---VAS 302
V F +G+Y+++ D +K+W + A L GH+ L + + L + S
Sbjct: 385 VTFVCFSPNGKYLLSAQLDSSLKLWDPKKAKPLKYYNGHKNKKYCLFANMSVPLGKHIIS 444
Query: 303 ASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS---DDGTCRIW 357
S D I VW + + +L GHT V A P +++S D RIW
Sbjct: 445 GSEDGRILVWSIQTKQIVQILEGHTTPVLATDSHP----TLNIIASGGLEPDNVIRIW 498
>sp|Q5FWQ6|WDR69_XENLA Outer row dynein assembly protein 16 homolog OS=Xenopus laevis
GN=wdr69 PE=2 SV=1
Length = 415
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 23/184 (12%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSS 295
I + GHR + A F+ + T S D+ K+W C+A+ GH+ ++ D+ S
Sbjct: 254 IHTLIGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNGKCVATLTGHDDEVLDVTFDS 313
Query: 296 NNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCR 355
LVA+AS D RV+ ++ L GH ++ I F+ + +++++S D T R
Sbjct: 314 TGQLVATASADGTARVYSASSRKCLAKLEGHEGEISKICFNAQGN---RIVTASSDKTSR 370
Query: 356 IWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTL 415
+WD P + + + +IF CAFN G +TGS D
Sbjct: 371 LWD------------PHTGECL--------QVLKGHTDEIFSCAFNYEGNTIITGSKDNT 410
Query: 416 ARVW 419
R+W
Sbjct: 411 CRIW 414
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 114/276 (41%), Gaps = 63/276 (22%)
Query: 234 QNIKRVRGHRNAVYCAIFDR-SGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLA 292
+ + + GHRN VY F+ G + TGS D+ K+WS ET C + RGH +I L
Sbjct: 125 EELHTLEGHRNVVYAIQFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLV 184
Query: 293 VSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDG 352
+ + L+A+ S D ++W + G L GH A + +++F+ +L++ S D
Sbjct: 185 FNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGD---RLITGSFDH 241
Query: 353 TCRIWDARYSQFSPRIYIP--RPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTG 410
T +W+ IP R + G SS+ FN + ++ T
Sbjct: 242 TVSVWE-----------IPSGRRIHTLIGHRGEISSA-----------QFNWDCSLIATA 279
Query: 411 SSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDS 470
S D ++W++ + L+GH+++V V F DS
Sbjct: 280 SMDKSCKLWDSLNGKC---------VATLTGHDDEVLDVTF-----------------DS 313
Query: 471 TPKFKNSWFCHDNIVTCSRDGSAIIWIPRSRRSHPK 506
T + + T S DG+A ++ SR+ K
Sbjct: 314 TGQL---------VATASADGTARVYSASSRKCLAK 340
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 125/339 (36%), Gaps = 95/339 (28%)
Query: 276 YCLASCRGHEGDITDLAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAF 335
Y R H +T++A + + + + S D +VW G + L GH V AI F
Sbjct: 83 YLFKVLRAHILPLTNVAFNKSGSSFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIQF 142
Query: 336 SPRPGSVYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQI 395
+ G ++ + S D TC++W A + + Y + + +I
Sbjct: 143 NNPYGD--KIATGSFDKTCKLWSAE----TGKCY----------------HTFRGHTAEI 180
Query: 396 FCCAFNANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCA 455
C FN T+ TGS DT A++W+ Q E LSGH ++ + F+
Sbjct: 181 VCLVFNPQSTLIATGSMDTTAKLWDI---------QSGEEALTLSGHAAEIISLSFNTTG 231
Query: 456 VASRFSLADSSKEDSTPKFKNSWFCHDNIVTCSRDGSAIIW-IPRSRRSHPKAARWTQAY 514
D ++T S D + +W IP RR H
Sbjct: 232 --------------------------DRLITGSFDHTVSVWEIPSGRRIHT--------- 256
Query: 515 HLKVPPPPMPPQPPRGGPRQRILPTPRG-VNMIVWSLDNRFVLAAIMDCRICVWNAADGS 573
L RG ++ ++ D + A MD +W++ +G
Sbjct: 257 ----------------------LIGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNGK 294
Query: 574 LVHSLTGHTESTYVLDVHPFNP--RIAMSAGYDGKTIVW 610
V +LTGH + VLDV F+ ++ +A DG V+
Sbjct: 295 CVATLTGHDDE--VLDV-TFDSTGQLVATASADGTARVY 330
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 36/78 (46%)
Query: 236 IKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSS 295
+ ++ GH + F+ G ++T S D+ ++W T CL +GH +I A +
Sbjct: 338 LAKLEGHEGEISKICFNAQGNRIVTASSDKTSRLWDPHTGECLQVLKGHTDEIFSCAFNY 397
Query: 296 NNALVASASNDCIIRVWR 313
+ + S D R+WR
Sbjct: 398 EGNTIITGSKDNTCRIWR 415
>sp|D3BUN1|LIS1_POLPA Lissencephaly-1 homolog OS=Polysphondylium pallidum PE=3 SV=1
Length = 417
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 95/241 (39%), Gaps = 54/241 (22%)
Query: 231 QKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
Q IK + GH + V C F SG +++ S D+ +K+W T YC + GHE +
Sbjct: 176 QSFDCIKTLHGHDHNVSCVRFLPSGDQLVSSSRDKSIKVWETATGYCTKTLTGHEDWVRK 235
Query: 291 LAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPR-----PGSVYQ- 344
+ VS + +AS SND RVW L G + R H+ V +A+SP PGS+
Sbjct: 236 VIVSEDGTTLASCSNDQTARVWNLAKGECLLTFREHSHVVECLAYSPANIVEVPGSLLST 295
Query: 345 ---------------------LLSSSDDGTCRIWD----------------ARYSQFSP- 366
L + S D T +IW+ R +F P
Sbjct: 296 PEGKAKAKAGAGGTSFGQAGYLATGSRDKTIKIWELATGRCLQTYIGHDNWVRSIKFHPC 355
Query: 367 -RIYIP-------RPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARV 418
+ I R D GR + + A SH I C F ++ TG D + ++
Sbjct: 356 GKYLISVGDDKSIRVWDIAQGRCIKTINEA--HSHFISCLDFCSHNPHIATGGVDDIIKI 413
Query: 419 W 419
W
Sbjct: 414 W 414
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 144/376 (38%), Gaps = 61/376 (16%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNA 298
+ GHRN + F +++ S+D ++IW ++ + +GH + D+ +
Sbjct: 100 LTGHRNCINAVRFHPLFSVIVSASEDATMRIWDFDSGDFERTLKGHTNAVQDIDFDKSGN 159
Query: 299 LVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
L+AS S D I++W I L GH V+ + F P S QL+SSS D + ++W+
Sbjct: 160 LLASCSADLTIKLWDFQSFDCIKTLHGHDHNVSCVRFLP---SGDQLVSSSRDKSIKVWE 216
Query: 359 ARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARV 418
+ + D V R + S +GT + S+D ARV
Sbjct: 217 TATGYCTKT--LTGHEDWV--RKVIVSE----------------DGTTLASCSNDQTARV 256
Query: 419 WNACKPNTDDS-DQPNHEIDVLSGHENDVNYVQFSGCAVASRFSLADSSKEDSTPKFKNS 477
WN K + + +H ++ L+ + N V+ G +++ A + F +
Sbjct: 257 WNLAKGECLLTFREHSHVVECLA--YSPANIVEVPGSLLSTPEGKAKAKAGAGGTSFGQA 314
Query: 478 WFCHDNIVTCSRDGSAIIWIPRSRRSHPKAARWTQAYHLKVPPPPMPPQPPRGGPRQRIL 537
+ + T SRD + IW + G Q +
Sbjct: 315 GY----LATGSRDKTIKIW-----------------------------ELATGRCLQTYI 341
Query: 538 PTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLT-GHTESTYVLDVHPFNPR 596
V I + +++++ D I VW+ A G + ++ H+ LD NP
Sbjct: 342 GHDNWVRSIKFHPCGKYLISVGDDKSIRVWDIAQGRCIKTINEAHSHFISCLDFCSHNPH 401
Query: 597 IAMSAGYDGKTIVWDI 612
IA + G D +W +
Sbjct: 402 IA-TGGVDDIIKIWKL 416
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 91/230 (39%), Gaps = 24/230 (10%)
Query: 237 KRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSN 296
+ ++GH NAV FD+SG + + S D +K+W ++ C+ + GH+ +++ + +
Sbjct: 140 RTLKGHTNAVQDIDFDKSGNLLASCSADLTIKLWDFQSFDCIKTLHGHDHNVSCVRFLPS 199
Query: 297 NALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRI 356
+ S+S D I+VW G L GH V + S + L S S+D T R+
Sbjct: 200 GDQLVSSSRDKSIKVWETATGYCTKTLTGHEDWVRKVIVSEDGTT---LASCSNDQTARV 256
Query: 357 WD-------ARYSQFSPRI----YIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGT 405
W+ + + S + Y P V G ++ +F G
Sbjct: 257 WNLAKGECLLTFREHSHVVECLAYSPANIVEVPGSLLSTPEGKAKAKAGAGGTSFGQAG- 315
Query: 406 VFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCA 455
TGS D ++W + GH+N V ++F C
Sbjct: 316 YLATGSRDKTIKIWELATGRC---------LQTYIGHDNWVRSIKFHPCG 356
>sp|O43017|SWD3_SCHPO Set1 complex component swd3 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=swd3 PE=1 SV=1
Length = 380
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 23/181 (12%)
Query: 241 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNALV 300
GH +V C + R++ T S D +KIWS T + GH I+ + ++ + +
Sbjct: 52 GHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYL 111
Query: 301 ASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDAR 360
ASAS+D IR+W + L+GHT V++I F+P G++ L+S S D T RIW+ +
Sbjct: 112 ASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPL-GTL--LVSGSWDETVRIWNLQ 168
Query: 361 YSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFNANGTVFVTGSSDTLARVWN 420
D R M P+ S I + +A+GT+ T S D +AR+W+
Sbjct: 169 --------------DGTCLR-MLPA-----HSEPIISVSISADGTLCATASYDGMARIWD 208
Query: 421 A 421
Sbjct: 209 V 209
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 231 QKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITD 290
+K +++ ++GH N V F+ G +++GS D V+IW+++ CL H I
Sbjct: 126 EKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIIS 185
Query: 291 LAVSSNNALVASASNDCIIRVWRLPDGLPI-SVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
+++S++ L A+AS D + R+W + G + +++ ++ + F+ LL S+
Sbjct: 186 VSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSNLQFTENRK---YLLVSN 242
Query: 350 DDGTCRIWDAR 360
+ R+WD R
Sbjct: 243 LNSQIRLWDYR 253
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 541 RGVNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHTESTYVLDVHPFNPRIAMS 600
RG++ + W+ ++++ +A D I +W+ V L GHT +D +P + +S
Sbjct: 97 RGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLG-TLLVS 155
Query: 601 AGYDGKTIVWDIWEGIPIRI 620
+D +W++ +G +R+
Sbjct: 156 GSWDETVRIWNLQDGTCLRM 175
>sp|C5FP68|SCONB_ARTOC Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Arthroderma otae (strain ATCC MYA-4605 / CBS 113480)
GN=sconB PE=3 SV=1
Length = 674
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 73/129 (56%), Gaps = 8/129 (6%)
Query: 230 VQKMQNIKRVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDIT 289
++ + I+ +RGH + + C FD + +I+GS DR +K+WS + C+++ GH+G +
Sbjct: 365 IETGKEIRTLRGHESTIRCLQFDDTK--LISGSLDRTIKVWSWRSGECISTYTGHQGGV- 421
Query: 290 DLAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSS 349
L + ++ +AS S D I++W D +LRGHT V A+ +V+ S+S
Sbjct: 422 -LCLHFDSTTLASGSKDNTIKIWNFQDK-STQILRGHTDWVNAVKLDTASRTVF---SAS 476
Query: 350 DDGTCRIWD 358
DD T RIWD
Sbjct: 477 DDLTVRIWD 485
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNA 298
RGH N V C FD + + TGS D +KIW +ET + + RGHE I L ++
Sbjct: 334 FRGHTNGVMCLQFDDN--ILATGSYDATIKIWDIETGKEIRTLRGHESTIRCLQF--DDT 389
Query: 299 LVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGSVYQLLSSSDDGTCRIWD 358
+ S S D I+VW G IS GH V + F L S S D T +IW+
Sbjct: 390 KLISGSLDRTIKVWSWRSGECISTYTGHQGGVLCLHFDS-----TTLASGSKDNTIKIWN 444
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 75/183 (40%), Gaps = 40/183 (21%)
Query: 282 RGHEGDITDLAVSSNNALVASASNDCIIRVWRLPDGLPISVLRGHTAAVTAIAFSPRPGS 341
RGH + L N ++A+ S D I++W + G I LRGH + + + F
Sbjct: 335 RGHTNGVMCLQFDDN--ILATGSYDATIKIWDIETGKEIRTLRGHESTIRCLQFDD---- 388
Query: 342 VYQLLSSSDDGTCRIWDARYSQFSPRIYIPRPSDAVAGRNMAPSSSAGPQSHQIFCCAFN 401
+L+S S D T ++W R + S+ G Q + C F+
Sbjct: 389 -TKLISGSLDRTIKVWSWRSGE-------------------CISTYTGHQG-GVLCLHFD 427
Query: 402 ANGTVFVTGSSDTLARVWNACKPNTDDSDQPNHEIDVLSGHENDVNYVQFSGCAVASRFS 461
+ T +GS D ++WN D S Q +L GH + VN V+ A + FS
Sbjct: 428 S--TTLASGSKDNTIKIWNF----QDKSTQ------ILRGHTDWVNAVKLDT-ASRTVFS 474
Query: 462 LAD 464
+D
Sbjct: 475 ASD 477
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 239 VRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDI 288
+RGH + V D + R V + SDD V+IW ++T C+ + GH G +
Sbjct: 453 LRGHTDWVNAVKLDTASRTVFSASDDLTVRIWDLDTGKCIHTYAGHVGQV 502
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 256 RYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNALVASASNDCIIRVWRLP 315
RY++T + D +++W + T CL + GH + LA ++ + S + D + +VW
Sbjct: 576 RYMLTAALDSTLRLWEVHTGRCLRTFFGHIEGVWGLA--ADTLRLVSGAQDHMTKVWDPR 633
Query: 316 DGLPISVLRGHTAAVTAIAFS 336
G GH VT ++ S
Sbjct: 634 TGTCERTFTGHRGPVTCVSLS 654
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 258 VITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNALVASASNDCIIRVW 312
+++G+ D + K+W T C + GH G +T VS +++ +A+ S DC +R++
Sbjct: 618 LVSGAQDHMTKVWDPRTGTCERTFTGHRGPVT--CVSLSDSRMATGSEDCEVRMY 670
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 695,342,578
Number of Sequences: 539616
Number of extensions: 31957719
Number of successful extensions: 108582
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 1215
Number of HSP's that attempted gapping in prelim test: 88110
Number of HSP's gapped (non-prelim): 15140
length of query: 1749
length of database: 191,569,459
effective HSP length: 132
effective length of query: 1617
effective length of database: 120,340,147
effective search space: 194590017699
effective search space used: 194590017699
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 69 (31.2 bits)