Query 000272
Match_columns 1744
No_of_seqs 579 out of 3245
Neff 4.9
Searched_HMMs 46136
Date Fri Mar 29 02:15:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000272.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/000272hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1838 Alpha/beta hydrolase [ 100.0 3.6E-61 7.7E-66 566.0 35.6 363 110-496 39-409 (409)
2 COG0429 Predicted hydrolase of 100.0 1.8E-46 3.8E-51 429.2 25.5 313 156-478 24-343 (345)
3 PLN02511 hydrolase 100.0 2.9E-43 6.3E-48 422.2 34.3 335 121-478 28-368 (388)
4 PRK10985 putative hydrolase; P 100.0 1.2E-37 2.6E-42 364.5 30.8 307 158-476 10-321 (324)
5 PLN02385 hydrolase; alpha/beta 99.8 1.5E-19 3.3E-24 213.8 25.0 276 183-475 58-345 (349)
6 PLN02298 hydrolase, alpha/beta 99.8 1.2E-19 2.6E-24 212.3 22.9 275 184-476 30-318 (330)
7 PHA02857 monoglyceride lipase; 99.8 1.7E-19 3.7E-24 204.6 22.7 262 190-475 4-273 (276)
8 PRK10749 lysophospholipase L2; 99.8 5.1E-18 1.1E-22 199.8 21.6 271 188-474 32-328 (330)
9 COG2267 PldB Lysophospholipase 99.8 1.1E-17 2.4E-22 195.7 22.3 271 185-475 8-294 (298)
10 PRK03592 haloalkane dehalogena 99.8 1.3E-17 2.9E-22 191.5 22.6 260 188-478 9-292 (295)
11 PLN02652 hydrolase; alpha/beta 99.8 1.8E-17 3.8E-22 200.7 24.7 269 185-476 109-388 (395)
12 PRK13604 luxD acyl transferase 99.8 2.5E-17 5.5E-22 192.1 22.4 247 188-478 11-262 (307)
13 PLN02824 hydrolase, alpha/beta 99.8 8.9E-17 1.9E-21 184.6 25.5 254 188-474 10-293 (294)
14 KOG1455 Lysophospholipase [Lip 99.8 3.2E-17 7E-22 187.7 20.8 278 183-474 24-311 (313)
15 PRK00870 haloalkane dehalogena 99.8 3.1E-17 6.8E-22 189.5 20.2 266 181-474 14-300 (302)
16 TIGR03343 biphenyl_bphD 2-hydr 99.7 8.1E-17 1.8E-21 182.2 22.5 235 215-473 29-281 (282)
17 TIGR01607 PST-A Plasmodium sub 99.7 4.9E-17 1.1E-21 192.4 20.5 268 191-473 2-331 (332)
18 PF12697 Abhydrolase_6: Alpha/ 99.7 1.6E-16 3.4E-21 168.6 20.9 210 219-456 1-220 (228)
19 TIGR01738 bioH putative pimelo 99.7 1E-16 2.2E-21 173.2 19.2 231 217-472 5-245 (245)
20 TIGR02240 PHA_depoly_arom poly 99.7 2.8E-16 6E-21 179.2 23.5 254 189-478 5-269 (276)
21 TIGR02427 protocat_pcaD 3-oxoa 99.7 7.3E-17 1.6E-21 174.5 17.8 236 215-472 12-250 (251)
22 TIGR01250 pro_imino_pep_2 prol 99.7 7.3E-16 1.6E-20 171.0 25.7 258 194-473 9-288 (288)
23 TIGR03056 bchO_mg_che_rel puta 99.7 1.1E-15 2.4E-20 171.2 25.8 238 216-473 28-278 (278)
24 PRK06489 hypothetical protein; 99.7 1.3E-15 2.8E-20 181.6 25.6 241 216-476 69-358 (360)
25 PRK03204 haloalkane dehalogena 99.7 1.3E-15 2.8E-20 176.0 24.5 264 184-472 12-285 (286)
26 COG1647 Esterase/lipase [Gener 99.7 1.1E-16 2.3E-21 176.3 14.6 225 216-473 15-242 (243)
27 TIGR03695 menH_SHCHC 2-succiny 99.7 3.4E-16 7.3E-21 168.5 18.3 235 217-472 2-250 (251)
28 TIGR03611 RutD pyrimidine util 99.7 9.7E-16 2.1E-20 167.9 21.5 237 215-473 12-256 (257)
29 PRK10349 carboxylesterase BioH 99.7 9.7E-16 2.1E-20 172.2 20.7 232 217-474 14-255 (256)
30 PLN02872 triacylglycerol lipas 99.7 3.6E-16 7.8E-21 189.3 17.8 289 183-476 41-390 (395)
31 PLN02578 hydrolase 99.7 3.8E-15 8.3E-20 177.3 25.4 242 216-473 86-353 (354)
32 PLN02965 Probable pheophorbida 99.7 1.6E-15 3.4E-20 171.4 20.1 235 218-475 5-253 (255)
33 PLN02679 hydrolase, alpha/beta 99.7 1.1E-14 2.3E-19 174.1 26.6 237 216-475 88-357 (360)
34 TIGR01249 pro_imino_pep_1 prol 99.7 3.2E-15 7E-20 173.9 21.0 126 187-326 5-130 (306)
35 PRK05077 frsA fermentation/res 99.7 1.1E-14 2.4E-19 177.5 26.3 243 184-475 166-412 (414)
36 PRK10673 acyl-CoA esterase; Pr 99.7 3.6E-15 7.9E-20 166.1 20.2 231 214-473 14-253 (255)
37 PLN03087 BODYGUARD 1 domain co 99.7 8.1E-15 1.8E-19 181.1 24.5 133 184-327 174-310 (481)
38 PRK11126 2-succinyl-6-hydroxy- 99.6 2.7E-15 5.8E-20 166.2 17.7 228 216-474 2-241 (242)
39 PRK07581 hypothetical protein; 99.6 8.4E-15 1.8E-19 172.5 22.5 251 216-476 41-337 (339)
40 TIGR03008 pepcterm_CAAX CAAX p 99.6 1.7E-14 3.7E-19 162.1 21.3 134 1542-1685 67-209 (222)
41 TIGR03100 hydr1_PEP hydrolase, 99.6 1.8E-14 3.9E-19 166.0 21.8 236 216-473 26-273 (274)
42 PRK05855 short chain dehydroge 99.6 4.4E-14 9.5E-19 176.0 23.6 124 189-325 5-130 (582)
43 PLN02894 hydrolase, alpha/beta 99.6 1.2E-13 2.6E-18 167.9 26.7 106 215-325 104-210 (402)
44 PRK08775 homoserine O-acetyltr 99.6 1E-14 2.2E-19 172.8 15.4 238 218-476 59-340 (343)
45 TIGR01836 PHA_synth_III_C poly 99.6 2E-14 4.2E-19 170.9 16.9 106 216-330 62-175 (350)
46 PF00561 Abhydrolase_1: alpha/ 99.6 1.6E-14 3.5E-19 156.4 14.1 206 246-456 1-219 (230)
47 KOG1454 Predicted hydrolase/ac 99.6 3.5E-14 7.6E-19 168.3 17.0 274 186-476 25-325 (326)
48 TIGR01392 homoserO_Ac_trn homo 99.6 6.3E-14 1.4E-18 166.5 18.9 110 216-327 31-163 (351)
49 PRK14875 acetoin dehydrogenase 99.6 8.2E-14 1.8E-18 164.4 19.0 232 215-474 130-370 (371)
50 COG1506 DAP2 Dipeptidyl aminop 99.5 1.8E-13 3.9E-18 174.7 21.6 245 183-476 362-617 (620)
51 PRK00175 metX homoserine O-ace 99.5 3.3E-13 7.1E-18 162.6 22.5 105 216-327 48-183 (379)
52 PLN03084 alpha/beta hydrolase 99.5 5.8E-13 1.3E-17 161.2 23.6 104 215-327 126-233 (383)
53 PRK10566 esterase; Provisional 99.5 1.7E-13 3.7E-18 153.5 16.5 206 215-474 26-247 (249)
54 COG1266 Predicted metal-depend 99.5 5.6E-13 1.2E-17 146.8 19.8 84 1599-1683 125-212 (226)
55 KOG4178 Soluble epoxide hydrol 99.5 3.2E-13 7E-18 157.1 17.8 247 214-475 42-320 (322)
56 PF02517 Abi: CAAX protease se 99.5 7.9E-14 1.7E-18 134.9 9.9 83 1600-1683 7-90 (91)
57 PLN02211 methyl indole-3-aceta 99.5 1.3E-12 2.7E-17 150.9 20.5 106 214-325 16-121 (273)
58 KOG4409 Predicted hydrolase/ac 99.4 6.5E-12 1.4E-16 146.9 22.6 138 181-329 60-197 (365)
59 PF00326 Peptidase_S9: Prolyl 99.4 6.1E-13 1.3E-17 146.8 13.5 194 236-476 5-210 (213)
60 TIGR00976 /NonD putative hydro 99.4 2.8E-12 6.1E-17 161.7 20.4 133 191-331 1-137 (550)
61 KOG1552 Predicted alpha/beta h 99.4 7.4E-12 1.6E-16 141.8 18.3 212 191-477 40-254 (258)
62 PLN02980 2-oxoglutarate decarb 99.4 2E-11 4.3E-16 169.9 26.4 102 215-325 1370-1479(1655)
63 PF12695 Abhydrolase_5: Alpha/ 99.4 4.9E-12 1.1E-16 129.3 15.3 143 218-452 1-145 (145)
64 PRK11071 esterase YqiA; Provis 99.4 5.4E-12 1.2E-16 138.9 16.4 91 217-328 2-95 (190)
65 TIGR03101 hydr2_PEP hydrolase, 99.3 1.2E-11 2.7E-16 143.1 16.4 131 190-328 4-136 (266)
66 TIGR01838 PHA_synth_I poly(R)- 99.3 1.7E-11 3.7E-16 153.4 16.9 109 215-330 187-306 (532)
67 PRK06765 homoserine O-acetyltr 99.3 6.8E-11 1.5E-15 143.6 21.0 130 191-326 30-196 (389)
68 KOG2984 Predicted hydrolase [G 99.3 1.4E-11 3E-16 134.1 10.5 227 217-474 43-275 (277)
69 PRK07868 acyl-CoA synthetase; 99.3 1E-10 2.2E-15 156.9 20.9 252 215-478 66-364 (994)
70 PRK10115 protease 2; Provision 99.3 2.7E-10 5.8E-15 147.3 23.4 222 185-454 415-655 (686)
71 COG2945 Predicted hydrolase of 99.2 1.3E-10 2.7E-15 126.8 15.7 175 214-473 26-205 (210)
72 KOG4391 Predicted alpha/beta h 99.2 8.8E-11 1.9E-15 129.1 14.0 230 181-477 49-284 (300)
73 PLN00021 chlorophyllase 99.2 3.3E-10 7.1E-15 134.2 19.6 115 199-326 39-166 (313)
74 PF01738 DLH: Dienelactone hyd 99.2 1E-10 2.2E-15 129.9 13.8 183 214-474 12-216 (218)
75 PLN02442 S-formylglutathione h 99.2 1.4E-09 3.1E-14 126.6 21.9 190 215-454 46-264 (283)
76 PF02129 Peptidase_S15: X-Pro 99.2 2.6E-10 5.5E-15 131.6 14.6 130 195-330 1-140 (272)
77 PF06500 DUF1100: Alpha/beta h 99.1 8.6E-10 1.9E-14 133.3 18.3 233 183-475 162-409 (411)
78 TIGR02821 fghA_ester_D S-formy 99.1 5E-09 1.1E-13 121.2 23.3 111 215-328 41-175 (275)
79 KOG4667 Predicted esterase [Li 99.1 6.3E-10 1.4E-14 122.7 13.9 206 214-456 31-243 (269)
80 TIGR01840 esterase_phb esteras 99.1 1.2E-09 2.7E-14 121.3 15.9 109 214-326 11-130 (212)
81 COG0596 MhpC Predicted hydrola 99.1 4E-09 8.8E-14 112.0 18.4 102 216-327 21-124 (282)
82 COG4757 Predicted alpha/beta h 99.1 7.4E-10 1.6E-14 123.4 12.6 109 189-304 8-120 (281)
83 PRK11460 putative hydrolase; P 99.1 5.3E-09 1.2E-13 118.6 19.2 105 215-323 15-135 (232)
84 KOG2382 Predicted alpha/beta h 99.1 1.4E-09 3.1E-14 127.2 14.7 238 214-475 50-313 (315)
85 PRK05371 x-prolyl-dipeptidyl a 99.1 1.3E-08 2.8E-13 133.1 24.8 229 236-478 270-522 (767)
86 KOG2624 Triglyceride lipase-ch 99.0 4.2E-09 9E-14 127.9 18.4 286 183-476 45-399 (403)
87 TIGR01839 PHA_synth_II poly(R) 99.0 1E-09 2.2E-14 136.9 13.4 227 214-457 213-487 (560)
88 COG0412 Dienelactone hydrolase 99.0 1.2E-08 2.6E-13 116.6 20.4 202 189-476 5-234 (236)
89 PF05448 AXE1: Acetyl xylan es 99.0 1.5E-08 3.2E-13 120.7 21.8 240 181-474 51-319 (320)
90 PRK10162 acetyl esterase; Prov 99.0 4.5E-08 9.7E-13 116.0 23.9 131 184-328 55-197 (318)
91 TIGR01849 PHB_depoly_PhaZ poly 99.0 1.2E-08 2.7E-13 124.1 17.4 108 216-330 102-212 (406)
92 TIGR03502 lipase_Pla1_cef extr 98.8 2.6E-07 5.5E-12 120.0 24.3 119 190-310 421-576 (792)
93 COG3458 Acetyl esterase (deace 98.8 1E-07 2.2E-12 108.8 16.4 241 182-475 52-317 (321)
94 TIGR03230 lipo_lipase lipoprot 98.8 3.5E-08 7.5E-13 121.4 13.5 109 215-325 40-153 (442)
95 PF08538 DUF1749: Protein of u 98.8 5.8E-08 1.2E-12 113.8 13.4 242 216-473 33-303 (303)
96 cd00707 Pancreat_lipase_like P 98.7 2.6E-08 5.7E-13 116.0 9.8 109 215-326 35-147 (275)
97 COG2936 Predicted acyl esteras 98.7 1.3E-07 2.8E-12 118.1 15.5 140 185-331 18-164 (563)
98 PF02230 Abhydrolase_2: Phosph 98.7 2.5E-07 5.4E-12 103.4 16.0 181 213-475 11-215 (216)
99 PF07859 Abhydrolase_3: alpha/ 98.7 4.7E-08 1E-12 107.4 8.5 102 219-328 1-112 (211)
100 COG2021 MET2 Homoserine acetyl 98.7 6.6E-07 1.4E-11 106.6 18.4 112 215-328 50-184 (368)
101 PF02273 Acyl_transf_2: Acyl t 98.6 8.1E-07 1.8E-11 100.5 16.6 229 189-452 5-237 (294)
102 KOG2564 Predicted acetyltransf 98.6 1.1E-07 2.4E-12 108.8 9.3 104 215-322 73-178 (343)
103 COG0657 Aes Esterase/lipase [L 98.6 1.9E-06 4E-11 101.5 18.8 130 192-330 57-195 (312)
104 KOG4130 Prenyl protein proteas 98.5 2E-06 4.4E-11 96.3 16.7 78 1604-1682 135-233 (291)
105 COG3571 Predicted hydrolase of 98.5 1.2E-06 2.6E-11 93.6 14.3 164 216-452 14-181 (213)
106 KOG2100 Dipeptidyl aminopeptid 98.5 1.6E-06 3.5E-11 113.6 17.6 233 182-473 496-745 (755)
107 PF06342 DUF1057: Alpha/beta h 98.5 7E-06 1.5E-10 95.2 20.1 132 191-332 11-144 (297)
108 COG3243 PhaC Poly(3-hydroxyalk 98.5 6.5E-07 1.4E-11 107.8 11.7 253 215-476 106-400 (445)
109 KOG3043 Predicted hydrolase re 98.4 2.1E-06 4.5E-11 96.4 11.6 179 217-475 40-240 (242)
110 PF06821 Ser_hydrolase: Serine 98.4 3.2E-06 6.9E-11 92.6 12.4 91 219-326 1-91 (171)
111 PF06057 VirJ: Bacterial virul 98.3 2.2E-06 4.8E-11 94.8 10.6 103 217-326 3-107 (192)
112 PF00975 Thioesterase: Thioest 98.3 2.3E-05 5E-10 87.2 18.3 103 217-326 1-104 (229)
113 PF06028 DUF915: Alpha/beta hy 98.3 4.6E-06 9.9E-11 96.7 13.1 115 215-331 10-148 (255)
114 KOG2281 Dipeptidyl aminopeptid 98.3 5.3E-06 1.2E-10 102.8 14.2 236 182-474 606-866 (867)
115 PF12715 Abhydrolase_7: Abhydr 98.3 8.5E-07 1.9E-11 106.5 7.1 135 187-328 89-262 (390)
116 PF05728 UPF0227: Uncharacteri 98.3 2.8E-05 6.1E-10 86.5 18.0 92 219-330 2-95 (187)
117 PF12146 Hydrolase_4: Putative 98.3 3.4E-06 7.4E-11 81.3 8.5 63 215-279 15-78 (79)
118 PF09752 DUF2048: Uncharacteri 98.2 2.6E-05 5.6E-10 93.3 17.5 105 215-324 91-208 (348)
119 PF03583 LIP: Secretory lipase 98.2 5.2E-05 1.1E-09 89.5 19.7 95 232-333 13-120 (290)
120 PF10230 DUF2305: Uncharacteri 98.2 4E-05 8.7E-10 89.4 17.3 110 216-329 2-125 (266)
121 COG3208 GrsT Predicted thioest 98.2 2.1E-05 4.6E-10 89.8 14.4 203 214-451 5-216 (244)
122 PF07819 PGAP1: PGAP1-like pro 98.1 1.9E-05 4.1E-10 90.0 12.5 111 215-330 3-127 (225)
123 PLN02733 phosphatidylcholine-s 98.1 1.8E-05 3.9E-10 98.2 11.4 98 230-330 106-205 (440)
124 COG0400 Predicted esterase [Ge 98.0 6.9E-05 1.5E-09 84.7 14.4 103 214-324 16-132 (207)
125 COG4188 Predicted dienelactone 98.0 2.1E-05 4.6E-10 94.2 9.9 95 215-311 70-181 (365)
126 KOG1515 Arylacetamide deacetyl 97.9 0.00035 7.5E-09 84.2 18.7 129 194-330 69-211 (336)
127 KOG2931 Differentiation-relate 97.9 0.0022 4.8E-08 75.1 23.5 132 186-327 22-158 (326)
128 PF10503 Esterase_phd: Esteras 97.8 0.00015 3.3E-09 82.7 12.7 107 215-324 15-130 (220)
129 PF03096 Ndr: Ndr family; Int 97.8 0.00076 1.7E-08 79.2 17.7 131 189-328 2-136 (283)
130 PF12740 Chlorophyllase2: Chlo 97.7 0.00017 3.6E-09 83.8 11.6 106 212-326 13-131 (259)
131 PF01674 Lipase_2: Lipase (cla 97.7 2.2E-05 4.7E-10 89.4 3.1 90 217-308 2-94 (219)
132 PF05990 DUF900: Alpha/beta hy 97.6 0.00028 6.1E-09 81.0 11.4 113 215-328 17-139 (233)
133 COG1770 PtrB Protease II [Amin 97.6 0.0011 2.4E-08 84.1 16.3 228 187-457 420-661 (682)
134 PF08840 BAAT_C: BAAT / Acyl-C 97.6 0.00018 3.9E-09 81.3 8.1 55 273-330 4-60 (213)
135 PF03959 FSH1: Serine hydrolas 97.5 0.0005 1.1E-08 77.5 11.2 109 216-325 4-144 (212)
136 COG3509 LpqC Poly(3-hydroxybut 97.5 0.00077 1.7E-08 79.0 12.2 126 195-326 43-179 (312)
137 PF07224 Chlorophyllase: Chlor 97.5 0.00035 7.6E-09 80.5 8.9 106 212-326 42-157 (307)
138 KOG1553 Predicted alpha/beta h 97.5 0.00071 1.5E-08 79.7 11.4 131 186-328 214-347 (517)
139 PF03403 PAF-AH_p_II: Platelet 97.5 0.00026 5.6E-09 86.7 8.2 107 214-325 98-261 (379)
140 KOG3253 Predicted alpha/beta h 97.4 0.0004 8.7E-09 86.5 9.3 191 216-478 176-377 (784)
141 PF00151 Lipase: Lipase; Inte 97.4 0.00015 3.3E-09 87.3 5.2 106 214-325 69-186 (331)
142 KOG2237 Predicted serine prote 97.4 0.00098 2.1E-08 84.0 12.1 141 187-330 442-588 (712)
143 PF05677 DUF818: Chlamydia CHL 97.4 0.0012 2.6E-08 78.8 12.3 117 185-310 111-236 (365)
144 KOG4627 Kynurenine formamidase 97.3 0.00035 7.6E-09 77.8 6.6 122 195-330 52-176 (270)
145 PF05705 DUF829: Eukaryotic pr 97.3 0.0032 6.9E-08 71.9 14.6 226 218-472 1-240 (240)
146 COG3545 Predicted esterase of 97.3 0.0042 9.1E-08 68.4 14.0 92 217-326 3-94 (181)
147 COG4449 Predicted protease of 97.2 0.0002 4.3E-09 86.3 3.6 79 1605-1684 717-812 (827)
148 PF00756 Esterase: Putative es 97.2 0.0015 3.2E-08 74.2 9.8 113 214-329 22-153 (251)
149 KOG4840 Predicted hydrolases o 97.2 0.0035 7.6E-08 70.8 12.0 107 216-329 36-147 (299)
150 PRK10252 entF enterobactin syn 97.1 0.011 2.5E-07 82.2 19.7 101 215-324 1067-1169(1296)
151 COG4814 Uncharacterized protei 97.1 0.0019 4.1E-08 74.3 9.5 109 217-327 46-177 (288)
152 cd00312 Esterase_lipase Estera 96.9 0.0017 3.7E-08 81.4 8.1 128 195-327 75-214 (493)
153 COG3319 Thioesterase domains o 96.9 0.0048 1E-07 72.1 10.8 102 217-327 1-104 (257)
154 PF05057 DUF676: Putative seri 96.9 0.0029 6.3E-08 71.8 8.4 41 289-329 78-128 (217)
155 PRK04940 hypothetical protein; 96.9 0.042 9E-07 61.3 17.0 36 289-329 60-95 (180)
156 PF11339 DUF3141: Protein of u 96.8 0.046 1E-06 68.5 18.8 123 181-330 46-179 (581)
157 COG4782 Uncharacterized protei 96.8 0.0052 1.1E-07 74.0 10.2 95 215-310 115-212 (377)
158 PTZ00472 serine carboxypeptida 96.8 0.015 3.2E-07 73.4 14.6 142 183-329 44-219 (462)
159 PF02450 LCAT: Lecithin:choles 96.6 0.0039 8.4E-08 76.8 7.8 88 233-329 66-163 (389)
160 KOG3724 Negative regulator of 96.5 0.043 9.4E-07 71.0 15.8 104 215-328 88-222 (973)
161 COG1073 Hydrolases of the alph 96.5 0.01 2.2E-07 67.3 9.3 73 403-475 222-297 (299)
162 KOG3847 Phospholipase A2 (plat 96.4 0.013 2.8E-07 69.3 9.3 106 213-323 115-272 (399)
163 PF00135 COesterase: Carboxyle 96.4 0.0089 1.9E-07 75.0 8.8 129 196-326 106-245 (535)
164 COG1505 Serine proteases of th 96.3 0.02 4.3E-07 72.5 11.2 138 184-329 392-538 (648)
165 PF12048 DUF3530: Protein of u 96.3 0.06 1.3E-06 64.7 14.6 109 215-326 86-229 (310)
166 PF05577 Peptidase_S28: Serine 96.2 0.031 6.6E-07 69.6 12.3 110 216-329 29-151 (434)
167 COG4099 Predicted peptidase [G 96.1 0.025 5.4E-07 66.5 9.5 128 192-328 167-306 (387)
168 KOG3975 Uncharacterized conser 96.0 0.07 1.5E-06 61.7 12.7 112 214-327 27-148 (301)
169 PRK10439 enterobactin/ferric e 96.0 0.06 1.3E-06 67.1 13.0 106 215-326 208-323 (411)
170 COG1075 LipA Predicted acetylt 95.8 0.021 4.6E-07 69.1 8.1 108 216-331 59-169 (336)
171 PF10340 DUF2424: Protein of u 95.8 0.053 1.2E-06 66.5 11.3 109 214-329 120-238 (374)
172 smart00824 PKS_TE Thioesterase 95.7 0.074 1.6E-06 57.3 10.8 83 234-323 15-99 (212)
173 KOG1551 Uncharacterized conser 95.5 0.13 2.8E-06 59.9 11.9 59 416-478 310-369 (371)
174 KOG3967 Uncharacterized conser 95.4 0.14 2.9E-06 58.1 11.7 115 216-331 101-232 (297)
175 PLN02606 palmitoyl-protein thi 95.2 0.78 1.7E-05 55.1 17.7 109 216-331 26-137 (306)
176 KOG2565 Predicted hydrolases o 95.0 0.11 2.4E-06 62.9 10.1 93 216-313 152-253 (469)
177 PLN02633 palmitoyl protein thi 95.0 1.1 2.4E-05 54.1 18.1 108 216-331 25-136 (314)
178 KOG2551 Phospholipase/carboxyh 94.9 0.87 1.9E-05 52.5 16.2 64 408-478 159-223 (230)
179 cd00741 Lipase Lipase. Lipase 94.7 0.082 1.8E-06 56.4 7.5 54 273-326 12-67 (153)
180 KOG3101 Esterase D [General fu 94.6 0.092 2E-06 59.5 7.7 115 214-329 42-182 (283)
181 COG2272 PnbA Carboxylesterase 94.5 0.093 2E-06 65.8 8.2 128 195-327 76-218 (491)
182 PF01764 Lipase_3: Lipase (cla 94.0 0.13 2.8E-06 53.4 6.8 53 273-325 48-104 (140)
183 PLN02517 phosphatidylcholine-s 93.8 0.067 1.4E-06 68.4 5.1 94 234-329 158-266 (642)
184 PF00450 Peptidase_S10: Serine 93.8 0.61 1.3E-05 57.1 13.2 138 188-330 13-185 (415)
185 KOG2112 Lysophospholipase [Lip 93.6 0.56 1.2E-05 53.4 11.4 56 412-474 144-203 (206)
186 cd00519 Lipase_3 Lipase (class 93.3 0.17 3.6E-06 57.6 6.7 53 273-325 112-166 (229)
187 KOG2369 Lecithin:cholesterol a 92.9 0.064 1.4E-06 66.8 2.9 93 232-329 124-228 (473)
188 PF02089 Palm_thioest: Palmito 91.7 2.5 5.4E-05 50.5 13.8 40 289-329 80-119 (279)
189 COG2819 Predicted hydrolase of 91.2 3.1 6.8E-05 49.3 13.8 43 281-325 127-171 (264)
190 PF10086 DUF2324: Putative mem 90.8 2.8 6.1E-05 48.6 12.8 42 1600-1645 64-105 (223)
191 KOG2541 Palmitoyl protein thio 90.6 1.4 3E-05 52.0 10.1 106 217-329 24-131 (296)
192 PF06259 Abhydrolase_8: Alpha/ 90.5 3.1 6.8E-05 46.7 12.4 52 272-325 91-143 (177)
193 PF04083 Abhydro_lipase: Parti 89.9 0.68 1.5E-05 43.6 5.6 46 184-229 10-56 (63)
194 KOG2183 Prolylcarboxypeptidase 89.8 0.84 1.8E-05 56.4 7.8 109 217-331 81-207 (492)
195 PF08386 Abhydrolase_4: TAP-li 89.5 0.67 1.5E-05 47.1 5.8 58 412-473 34-92 (103)
196 COG3150 Predicted esterase [Ge 89.4 1.4 3.1E-05 48.9 8.3 80 219-311 2-81 (191)
197 PF01083 Cutinase: Cutinase; 89.2 0.52 1.1E-05 52.5 5.1 56 272-327 64-123 (179)
198 PLN02454 triacylglycerol lipas 88.4 0.88 1.9E-05 56.8 6.8 39 272-310 209-249 (414)
199 COG3946 VirJ Type IV secretory 88.2 0.91 2E-05 56.0 6.6 82 216-304 260-341 (456)
200 PF11144 DUF2920: Protein of u 88.1 2.9 6.4E-05 52.1 10.9 39 273-311 164-206 (403)
201 PF10142 PhoPQ_related: PhoPQ- 87.3 8.2 0.00018 48.0 14.1 70 402-478 252-323 (367)
202 PF04301 DUF452: Protein of un 87.2 7.9 0.00017 44.8 13.0 78 216-325 11-89 (213)
203 PF11187 DUF2974: Protein of u 86.8 1.3 2.7E-05 51.3 6.5 51 274-325 70-122 (224)
204 COG0627 Predicted esterase [Ge 86.3 1.6 3.5E-05 53.0 7.3 38 290-329 153-190 (316)
205 PLN00413 triacylglycerol lipas 85.7 1.7 3.7E-05 55.1 7.2 36 274-309 269-304 (479)
206 PRK12438 hypothetical protein; 85.4 24 0.00052 48.8 17.8 13 1670-1682 204-216 (991)
207 PLN02162 triacylglycerol lipas 85.4 1.8 3.8E-05 54.8 7.1 53 273-325 262-320 (475)
208 PLN02209 serine carboxypeptida 85.4 5.7 0.00012 50.4 11.7 137 189-328 42-214 (437)
209 PF11288 DUF3089: Protein of u 85.0 1.6 3.4E-05 50.2 5.9 83 245-327 45-137 (207)
210 PLN03016 sinapoylglucose-malat 84.7 8.1 0.00017 49.0 12.5 135 190-327 41-211 (433)
211 COG2339 prsW Membrane proteina 84.4 55 0.0012 39.4 18.3 14 1601-1614 108-121 (274)
212 PLN02934 triacylglycerol lipas 83.8 2 4.3E-05 54.9 6.6 37 273-309 305-341 (515)
213 PLN02408 phospholipase A1 83.1 2.1 4.5E-05 52.9 6.3 38 273-310 182-221 (365)
214 PLN02571 triacylglycerol lipas 82.4 3 6.5E-05 52.3 7.3 38 273-310 208-247 (413)
215 KOG1516 Carboxylesterase and r 81.4 4.4 9.6E-05 52.1 8.7 108 196-307 94-213 (545)
216 COG1295 Rbn Ribonuclease BN fa 81.2 30 0.00065 41.9 15.1 44 1419-1463 95-140 (303)
217 PRK00068 hypothetical protein; 81.1 19 0.00042 49.6 14.5 14 1670-1683 206-219 (970)
218 KOG4372 Predicted alpha/beta h 79.8 2.7 5.9E-05 52.2 5.7 84 215-303 79-164 (405)
219 PRK10263 DNA translocase FtsK; 79.4 8.1 0.00017 54.3 10.3 13 1633-1645 122-134 (1355)
220 PRK04214 rbn ribonuclease BN/u 79.2 57 0.0012 41.2 17.1 60 1411-1471 86-147 (412)
221 COG4377 Predicted membrane pro 78.4 54 0.0012 37.7 14.4 37 1604-1645 84-120 (258)
222 PRK12438 hypothetical protein; 78.3 47 0.001 46.1 16.7 32 1542-1573 167-200 (991)
223 PF05297 Herpes_LMP1: Herpesvi 77.9 0.71 1.5E-05 54.2 0.0 27 1529-1558 129-155 (381)
224 COG1230 CzcD Co/Zn/Cd efflux s 77.8 1.5E+02 0.0033 36.3 19.1 52 1612-1664 152-204 (296)
225 PF07082 DUF1350: Protein of u 77.4 13 0.00029 43.9 10.0 69 233-310 35-111 (250)
226 KOG4540 Putative lipase essent 76.7 4.1 8.9E-05 48.4 5.6 53 272-329 259-311 (425)
227 COG5153 CVT17 Putative lipase 76.7 4.1 8.9E-05 48.4 5.6 53 272-329 259-311 (425)
228 COG1480 Predicted membrane-ass 76.4 1E+02 0.0022 41.3 18.1 30 1166-1196 105-134 (700)
229 PLN02847 triacylglycerol lipas 76.3 4.3 9.3E-05 52.7 6.1 36 274-309 236-271 (633)
230 PF06609 TRI12: Fungal trichot 76.2 98 0.0021 41.2 18.4 44 1600-1643 280-325 (599)
231 PF03631 Virul_fac_BrkB: Virul 75.3 1.6E+02 0.0034 34.5 18.3 62 1410-1472 57-121 (260)
232 PRK10263 DNA translocase FtsK; 75.0 39 0.00085 48.0 14.8 19 1627-1645 142-160 (1355)
233 KOG4569 Predicted lipase [Lipi 74.0 4.7 0.0001 49.4 5.5 59 267-325 149-211 (336)
234 TIGR02916 PEP_his_kin putative 73.8 92 0.002 41.7 17.7 26 1423-1448 27-52 (679)
235 KOG2182 Hydrolytic enzymes of 73.7 14 0.0003 47.2 9.5 92 236-329 109-210 (514)
236 TIGR00765 yihY_not_rbn YihY fa 73.6 1.2E+02 0.0027 35.7 16.9 58 1411-1470 69-129 (259)
237 PF11700 ATG22: Vacuole efflux 73.4 26 0.00057 45.0 12.2 27 1715-1741 449-475 (477)
238 PF13367 PrsW-protease: Protea 72.7 40 0.00087 37.8 12.1 33 1654-1686 133-173 (191)
239 PLN02802 triacylglycerol lipas 72.6 6.1 0.00013 50.6 6.2 38 273-310 312-351 (509)
240 PLN02310 triacylglycerol lipas 71.7 6.2 0.00013 49.5 5.8 38 273-310 189-230 (405)
241 PF03699 UPF0182: Uncharacteri 71.6 43 0.00093 45.5 13.8 12 1672-1683 196-207 (774)
242 PLN02324 triacylglycerol lipas 71.6 5.3 0.00011 50.2 5.3 38 273-310 197-236 (415)
243 PRK00068 hypothetical protein; 71.5 99 0.0022 43.1 17.1 9 1512-1520 74-82 (970)
244 PLN03037 lipase class 3 family 71.1 6.1 0.00013 50.8 5.7 37 274-310 299-339 (525)
245 TIGR00766 ribonuclease, putati 71.1 1.3E+02 0.0027 35.6 16.2 53 1412-1465 70-126 (263)
246 PLN02719 triacylglycerol lipas 70.7 5.7 0.00012 51.0 5.3 39 272-310 276-319 (518)
247 KOG2521 Uncharacterized conser 67.9 67 0.0015 40.0 13.3 108 218-329 40-155 (350)
248 PLN02761 lipase class 3 family 67.2 7.3 0.00016 50.1 5.2 38 272-309 271-314 (527)
249 PRK10929 putative mechanosensi 66.8 84 0.0018 44.5 15.4 17 1181-1197 267-283 (1109)
250 COG4553 DepA Poly-beta-hydroxy 66.6 2.4E+02 0.0053 34.5 16.8 253 216-478 103-410 (415)
251 PLN02753 triacylglycerol lipas 66.2 7.9 0.00017 49.8 5.3 37 273-309 291-332 (531)
252 COG4232 Thiol:disulfide interc 64.9 1.2E+02 0.0026 40.0 15.2 21 1464-1484 171-191 (569)
253 PRK11281 hypothetical protein; 64.5 2E+02 0.0043 41.2 18.2 16 1649-1664 698-713 (1113)
254 PF03699 UPF0182: Uncharacteri 64.0 1.8E+02 0.0039 40.0 17.1 14 1509-1522 60-73 (774)
255 PRK10369 heme lyase subunit Nr 63.7 4.9E+02 0.011 34.8 20.7 8 1415-1422 3-10 (571)
256 COG2382 Fes Enterochelin ester 63.6 10 0.00022 45.8 5.3 108 214-327 96-213 (299)
257 PF05297 Herpes_LMP1: Herpesvi 63.4 2.4 5.1E-05 50.1 0.0 17 1457-1473 17-33 (381)
258 KOG4388 Hormone-sensitive lipa 62.6 19 0.00041 46.6 7.4 84 216-309 396-489 (880)
259 COG4858 Uncharacterized membra 61.6 28 0.00061 39.4 7.7 42 1442-1483 140-183 (226)
260 COG2830 Uncharacterized protei 61.6 74 0.0016 35.7 10.7 75 217-323 12-87 (214)
261 PRK07668 hypothetical protein; 61.4 3.5E+02 0.0076 32.6 17.1 29 1542-1570 139-167 (254)
262 TIGR03109 exosortase_1 exosort 61.3 2.3E+02 0.005 34.1 15.9 20 1647-1666 180-199 (267)
263 KOG1278 Endosomal membrane pro 59.7 2.2E+02 0.0048 37.5 15.8 118 1501-1634 435-558 (628)
264 PLN02213 sinapoylglucose-malat 59.0 30 0.00064 42.1 8.2 63 247-309 3-71 (319)
265 TIGR00844 c_cpa1 na(+)/h(+) an 58.5 6.4E+02 0.014 35.1 20.6 19 1645-1663 262-280 (810)
266 TIGR02921 PEP_integral PEP-CTE 57.8 1.3E+02 0.0027 39.6 13.2 71 1617-1687 123-201 (952)
267 PLN02436 cellulose synthase A 56.9 1.5E+02 0.0032 41.8 14.5 21 1431-1451 848-868 (1094)
268 KOG1282 Serine carboxypeptidas 55.7 77 0.0017 40.8 11.2 134 187-329 45-216 (454)
269 PF06027 DUF914: Eukaryotic pr 54.6 2.4E+02 0.0052 35.1 14.9 38 1607-1645 183-220 (334)
270 KOG1419 Voltage-gated K+ chann 54.5 20 0.00044 46.2 5.8 72 1624-1704 213-295 (654)
271 PF08237 PE-PPE: PE-PPE domain 53.9 62 0.0014 37.8 9.4 84 245-328 2-91 (225)
272 COG2939 Carboxypeptidase C (ca 53.5 34 0.00074 44.0 7.6 96 213-310 98-219 (498)
273 PRK09928 choline transport pro 53.0 33 0.00071 45.9 7.6 47 1631-1677 134-180 (679)
274 PF06638 Strabismus: Strabismu 52.4 1.2E+02 0.0026 39.3 12.0 26 1466-1491 97-122 (505)
275 PF05277 DUF726: Protein of un 51.3 26 0.00056 43.4 6.0 43 287-329 218-263 (345)
276 PRK01637 hypothetical protein; 50.7 5.2E+02 0.011 31.1 17.3 37 1428-1465 95-133 (286)
277 PRK10921 twin-arginine protein 50.2 5.3E+02 0.011 31.0 20.2 69 1600-1674 164-233 (258)
278 PF09726 Macoilin: Transmembra 50.1 70 0.0015 43.3 10.0 35 1426-1464 27-61 (697)
279 PRK05771 V-type ATP synthase s 49.8 3.9E+02 0.0086 35.9 16.9 44 1380-1429 321-373 (646)
280 PRK11465 putative mechanosensi 48.3 9.3E+02 0.02 33.3 20.9 73 1405-1483 127-203 (741)
281 PF05977 MFS_3: Transmembrane 48.2 3.3E+02 0.0071 35.8 15.5 44 1617-1660 271-321 (524)
282 PRK14013 hypothetical protein; 48.0 4.6E+02 0.0099 32.8 15.4 46 1498-1546 61-112 (338)
283 COG1377 FlhB Flagellar biosynt 45.8 2.5E+02 0.0054 35.4 13.0 74 1402-1483 22-101 (363)
284 PRK12405 electron transport co 45.8 2.6E+02 0.0056 33.2 12.6 34 1600-1635 73-106 (231)
285 PRK09776 putative diguanylate 45.7 5.6E+02 0.012 36.0 18.2 10 1427-1436 19-28 (1092)
286 PLN02400 cellulose synthase 45.4 3.1E+02 0.0068 38.9 14.9 15 1435-1449 841-855 (1085)
287 PRK03612 spermidine synthase; 44.8 8.7E+02 0.019 32.0 20.0 48 1598-1645 119-170 (521)
288 PRK11462 putative transporter; 44.7 6.9E+02 0.015 31.9 17.3 12 1728-1739 423-434 (460)
289 PRK10429 melibiose:sodium symp 43.9 7.9E+02 0.017 31.2 21.0 10 1729-1738 429-438 (473)
290 COG3673 Uncharacterized conser 43.8 83 0.0018 38.7 8.3 94 216-309 31-142 (423)
291 PF12670 DUF3792: Protein of u 43.5 4E+02 0.0086 28.1 12.5 26 1543-1568 65-90 (116)
292 PF05576 Peptidase_S37: PS-10 42.2 18 0.00039 45.5 2.8 106 215-328 62-171 (448)
293 PRK02975 putative common antig 41.7 5.4E+02 0.012 32.5 14.5 40 1626-1665 178-226 (450)
294 TIGR00353 nrfE c-type cytochro 41.6 8.8E+02 0.019 32.6 17.8 15 1669-1683 424-438 (576)
295 KOG3533 Inositol 1,4,5-trispho 40.5 2.6E+02 0.0055 40.1 12.5 19 467-485 856-874 (2706)
296 PRK14995 methyl viologen resis 40.2 8.8E+02 0.019 31.0 17.4 13 1650-1662 355-367 (495)
297 TIGR00958 3a01208 Conjugate Tr 39.9 3.2E+02 0.0069 37.1 14.0 15 1432-1446 49-63 (711)
298 PF09994 DUF2235: Uncharacteri 39.8 1.3E+02 0.0029 36.0 9.4 92 218-309 3-112 (277)
299 COG4485 Predicted membrane pro 38.8 9.5E+02 0.021 32.9 16.9 50 1632-1682 386-440 (858)
300 TIGR00400 mgtE Mg2+ transporte 38.5 9.4E+02 0.02 31.0 17.2 78 1540-1643 354-431 (449)
301 COG1480 Predicted membrane-ass 38.0 5.4E+02 0.012 34.9 14.8 17 1386-1402 227-243 (700)
302 PF07787 DUF1625: Protein of u 37.2 1E+02 0.0022 36.4 7.8 48 1430-1480 156-204 (248)
303 PF02028 BCCT: BCCT family tra 36.6 1.7E+02 0.0037 38.1 10.2 36 1632-1667 118-153 (485)
304 PRK09509 fieF ferrous iron eff 36.4 8.5E+02 0.018 29.5 17.8 13 1544-1556 79-91 (299)
305 PF09586 YfhO: Bacterial membr 36.2 1.3E+03 0.027 32.0 19.0 25 1461-1485 210-234 (843)
306 PRK09950 putative transporter; 35.9 3.4E+02 0.0073 35.7 12.7 48 1631-1678 126-174 (506)
307 PRK15419 proline:sodium sympor 35.9 6.3E+02 0.014 32.9 15.2 43 1503-1551 9-51 (502)
308 COG1269 NtpI Archaeal/vacuolar 35.8 6.7E+02 0.015 34.1 15.8 41 1404-1445 355-404 (660)
309 PF03154 Atrophin-1: Atrophin- 35.4 1.1E+02 0.0024 42.2 8.4 18 1433-1450 799-816 (982)
310 TIGR00842 bcct choline/carniti 34.6 1E+02 0.0023 39.7 7.8 47 1632-1678 81-127 (453)
311 COG0529 CysC Adenylylsulfate k 34.5 71 0.0015 36.5 5.6 40 214-253 20-59 (197)
312 PRK02983 lysS lysyl-tRNA synth 34.4 2.2E+02 0.0048 40.7 11.5 10 1613-1622 128-137 (1094)
313 PRK09442 panF sodium/panthothe 34.3 1E+03 0.022 30.8 16.6 35 1503-1537 7-41 (483)
314 COG3859 Predicted membrane pro 33.8 1.4E+02 0.003 33.7 7.5 16 1630-1645 53-68 (185)
315 TIGR01912 TatC-Arch Twin argin 33.5 8.8E+02 0.019 28.8 18.0 71 1600-1675 162-233 (237)
316 PRK03356 L-carnitine/gamma-but 33.4 4.3E+02 0.0092 34.8 13.0 47 1631-1677 128-175 (504)
317 PRK09543 znuB high-affinity zi 33.2 2.2E+02 0.0047 34.0 9.7 97 1607-1707 20-118 (261)
318 COG3336 Predicted membrane pro 33.1 1.9E+02 0.0042 35.2 9.1 60 1607-1666 99-179 (299)
319 PLN02248 cellulose synthase-li 32.6 1.1E+03 0.023 34.1 16.9 26 1423-1450 882-908 (1135)
320 PRK05419 putative sulfite oxid 32.6 8.5E+02 0.018 28.3 16.5 13 1633-1645 152-164 (205)
321 TIGR02865 spore_II_E stage II 31.4 9E+02 0.019 33.5 16.1 51 1631-1682 200-250 (764)
322 COG4200 Uncharacterized protei 31.3 9.8E+02 0.021 28.7 17.3 27 1619-1645 155-182 (239)
323 TIGR02908 CoxD_Bacillus cytoch 31.0 5.5E+02 0.012 27.4 10.9 31 1453-1483 18-48 (110)
324 PF03205 MobB: Molybdopterin g 30.8 85 0.0018 33.9 5.4 45 218-262 1-45 (140)
325 PF13347 MFS_2: MFS/sugar tran 30.6 8.2E+02 0.018 30.5 14.7 17 1331-1347 74-90 (428)
326 PF09622 DUF2391: Putative int 30.4 1.1E+03 0.023 28.9 14.6 39 1600-1645 151-189 (267)
327 PF11872 DUF3392: Protein of u 30.3 1.6E+02 0.0034 31.1 6.9 33 1452-1484 42-74 (106)
328 PRK08633 2-acyl-glycerophospho 30.0 1E+03 0.023 33.5 17.0 185 1456-1664 135-340 (1146)
329 PLN00411 nodulin MtN21 family 29.4 4.4E+02 0.0096 33.0 11.9 30 1440-1483 2-31 (358)
330 COG4858 Uncharacterized membra 29.2 4.2E+02 0.009 30.7 10.2 7 1420-1426 55-61 (226)
331 PF06609 TRI12: Fungal trichot 29.0 8.4E+02 0.018 32.9 14.8 15 1425-1439 194-208 (599)
332 PF12805 FUSC-like: FUSC-like 29.0 1.2E+02 0.0027 36.2 6.9 34 1646-1681 23-56 (284)
333 PF06570 DUF1129: Protein of u 28.7 8.6E+02 0.019 28.0 13.3 14 1412-1425 31-46 (206)
334 COG4947 Uncharacterized protei 28.5 1E+02 0.0022 35.0 5.5 51 276-329 88-139 (227)
335 TIGR00930 2a30 K-Cl cotranspor 28.4 1.9E+03 0.042 31.2 19.7 22 1542-1563 310-331 (953)
336 PLN02638 cellulose synthase A 28.4 5.3E+02 0.011 36.8 13.0 16 1435-1450 836-851 (1079)
337 PF09586 YfhO: Bacterial membr 28.3 1E+03 0.023 32.7 16.2 11 1473-1483 149-159 (843)
338 COG1615 Uncharacterized conser 27.9 5.4E+02 0.012 35.2 12.3 33 1543-1575 148-181 (885)
339 PRK02509 hypothetical protein; 27.8 1.8E+03 0.04 31.5 17.7 42 1530-1572 228-270 (973)
340 PRK11715 inner membrane protei 27.8 1E+03 0.022 31.0 14.7 21 1541-1561 331-351 (436)
341 KOG2029 Uncharacterized conser 27.4 49 0.0011 43.4 3.2 53 276-328 511-574 (697)
342 PRK00293 dipZ thiol:disulfide 27.0 1.4E+03 0.03 30.5 16.4 23 1463-1485 169-191 (571)
343 PRK13592 ubiA prenyltransferas 26.8 8E+02 0.017 30.4 12.9 30 1433-1462 56-85 (299)
344 PLN02248 cellulose synthase-li 26.6 6.7E+02 0.014 36.0 13.5 34 1612-1645 965-998 (1135)
345 KOG1532 GTPase XAB1, interacts 26.5 1.6E+02 0.0034 35.9 6.8 96 215-310 17-146 (366)
346 PF01580 FtsK_SpoIIIE: FtsK/Sp 26.4 3.4E+02 0.0073 30.5 9.4 79 195-284 27-113 (205)
347 COG3559 TnrB3 Putative exporte 26.4 1.6E+03 0.034 29.4 15.9 217 1500-1729 241-521 (536)
348 TIGR02121 Na_Pro_sym sodium/pr 26.1 1.1E+03 0.024 30.6 15.0 34 1501-1537 3-36 (487)
349 PF06899 WzyE: WzyE protein; 25.8 8.2E+02 0.018 31.5 12.8 38 1629-1666 180-226 (448)
350 COG3127 Predicted ABC-type tra 25.6 1E+03 0.022 32.9 14.3 189 1497-1731 252-491 (829)
351 COG1269 NtpI Archaeal/vacuolar 25.5 1.9E+03 0.04 30.0 19.0 25 1544-1568 458-482 (660)
352 PF06123 CreD: Inner membrane 25.2 1.3E+03 0.029 29.9 15.1 21 1541-1561 325-345 (430)
353 PF07185 DUF1404: Protein of u 25.1 2.1E+02 0.0045 32.5 7.1 67 1615-1684 35-114 (169)
354 COG2270 Permeases of the major 24.8 4.2E+02 0.0091 34.2 10.5 26 1429-1454 119-144 (438)
355 PF12270 Cyt_c_ox_IV: Cytochro 24.6 9.5E+02 0.021 26.6 11.7 54 1505-1560 43-107 (137)
356 KOG1287 Amino acid transporter 24.5 1.5E+03 0.033 29.8 15.4 32 1543-1574 235-266 (479)
357 PLN02893 Cellulose synthase-li 24.5 9E+02 0.02 33.4 13.9 45 1111-1160 109-157 (734)
358 PF02313 Fumarate_red_D: Fumar 24.5 4.4E+02 0.0096 28.4 8.9 98 1457-1558 9-113 (118)
359 PF07857 DUF1632: CEO family ( 24.4 2.2E+02 0.0048 34.2 7.6 94 1619-1734 44-137 (254)
360 COG2211 MelB Na+/melibiose sym 24.1 1.7E+03 0.038 29.2 17.8 189 1443-1686 221-434 (467)
361 COG3125 CyoD Heme/copper-type 24.0 8.2E+02 0.018 26.2 10.6 24 1460-1483 17-40 (111)
362 PF06123 CreD: Inner membrane 23.9 6.4E+02 0.014 32.6 12.0 18 1622-1639 344-361 (430)
363 PF01583 APS_kinase: Adenylyls 23.5 1.3E+02 0.0028 33.5 5.2 38 217-254 2-39 (156)
364 PRK11715 inner membrane protei 23.3 7.1E+02 0.015 32.3 12.2 18 1622-1639 350-367 (436)
365 COG4452 CreD Inner membrane pr 23.1 1.2E+03 0.027 29.8 13.5 25 1179-1203 25-49 (443)
366 PLN02915 cellulose synthase A 23.1 1.9E+03 0.042 31.5 16.7 17 1435-1451 800-816 (1044)
367 TIGR01185 devC DevC protein. T 23.0 2.5E+02 0.0054 35.3 8.2 11 1527-1537 292-302 (380)
368 PLN02189 cellulose synthase 23.0 9.6E+02 0.021 34.3 13.9 43 1602-1645 861-903 (1040)
369 TIGR02921 PEP_integral PEP-CTE 22.9 1.3E+03 0.027 31.2 13.9 31 1424-1455 27-57 (952)
370 TIGR02916 PEP_his_kin putative 22.7 2E+03 0.043 29.4 19.1 33 1610-1643 181-213 (679)
371 PF06626 DUF1152: Protein of u 22.7 1.1E+02 0.0025 37.3 4.9 41 1390-1448 159-199 (297)
372 TIGR03480 HpnN hopanoid biosyn 22.6 1.7E+03 0.036 31.2 16.6 15 1650-1664 397-411 (862)
373 PRK11281 hypothetical protein; 22.5 6E+02 0.013 36.7 12.3 48 1403-1450 770-817 (1113)
374 PF14184 YrvL: Regulatory prot 22.5 5.4E+02 0.012 28.1 9.5 37 1601-1637 46-82 (132)
375 PF03176 MMPL: MMPL family; I 22.2 1.4E+03 0.031 27.6 15.4 46 1630-1679 252-301 (333)
376 PRK10582 cytochrome o ubiquino 22.1 9.7E+02 0.021 25.5 11.5 24 1460-1483 15-38 (109)
377 TIGR00831 a_cpa1 Na+/H+ antipo 22.1 66 0.0014 42.0 3.1 50 1431-1480 345-395 (525)
378 KOG1965 Sodium/hydrogen exchan 22.0 7E+02 0.015 33.4 11.8 191 1500-1725 34-301 (575)
379 KOG2927 Membrane component of 22.0 2.3E+02 0.005 35.4 7.2 9 1244-1252 27-35 (372)
380 PF06570 DUF1129: Protein of u 21.6 6.9E+02 0.015 28.8 10.8 19 1542-1560 79-97 (206)
381 TIGR03434 ADOP Acidobacterial 21.6 4.1E+02 0.0089 36.1 10.5 16 1250-1267 143-158 (803)
382 PF05987 DUF898: Bacterial pro 21.5 1.7E+03 0.036 28.0 14.9 15 1524-1538 112-126 (338)
383 PLN00151 potassium transporter 21.5 1.4E+03 0.03 32.1 14.7 36 1607-1645 536-571 (852)
384 cd04951 GT1_WbdM_like This fam 21.4 4E+02 0.0086 31.4 9.2 38 218-255 2-39 (360)
385 PLN03159 cation/H(+) antiporte 21.3 2.4E+03 0.052 29.8 18.1 8 1380-1387 67-74 (832)
386 TIGR01257 rim_protein retinal- 21.1 6E+02 0.013 39.3 12.3 27 1613-1641 744-770 (2272)
387 KOG1202 Animal-type fatty acid 20.8 3E+02 0.0066 39.3 8.4 52 272-323 2164-2216(2376)
388 PF06309 Torsin: Torsin; Inte 20.8 1.4E+02 0.0029 32.4 4.5 34 214-247 50-83 (127)
389 TIGR03145 cyt_nit_nrfE cytochr 20.7 2.2E+03 0.049 29.2 17.9 16 1669-1684 481-496 (628)
390 CHL00182 tatC Sec-independent 20.7 1.5E+03 0.032 27.2 18.9 70 1601-1675 175-245 (249)
391 TIGR01116 ATPase-IIA1_Ca sarco 20.7 8.4E+02 0.018 34.4 13.2 15 1396-1410 630-644 (917)
392 PF11700 ATG22: Vacuole efflux 20.0 2E+03 0.043 28.4 17.3 14 1648-1661 451-464 (477)
393 PLN02638 cellulose synthase A 20.0 1.3E+03 0.028 33.2 14.3 43 1602-1645 899-941 (1079)
No 1
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=100.00 E-value=3.6e-61 Score=565.99 Aligned_cols=363 Identities=33% Similarity=0.520 Sum_probs=329.0
Q ss_pred CCceEEEeCchhhHHHHHhcCCcccccCCCchhhhhccccccccceeecccCceeeEeccccCCCCccccccCCcceEEE
Q 000272 110 IGNWVLFTSPTAFNRFVLLRCPSISFEGSDLLEDVNEKLVKEDTHFVRLNSGRIQARTGAVRDGGETESEMEGKLEYQRV 189 (1744)
Q Consensus 110 ~g~~~L~~~~t~f~~fLl~~CPsLs~~y~p~~~~~~~~l~~~~~h~~tL~~GhlQTv~~a~~~~~~~~~~~~p~V~YeRe 189 (1744)
.+.|.++|.+++|.+|++.+||.|++.|.|++|| ++||+||++..+.. ..|.+.|+|+
T Consensus 39 ~~~~~l~~~~~~f~~~l~~~~~~l~~~y~p~~w~---------------~~ghlQT~~~~~~~-------~~p~~~y~Re 96 (409)
T KOG1838|consen 39 PRKPSLFCGDSGFARFLVPKCPLLEEKYLPTLWL---------------FSGHLQTLLLSFFG-------SKPPVEYTRE 96 (409)
T ss_pred CCCCeeecCchHHHHHHHhhccccccccccceee---------------cCCeeeeeehhhcC-------CCCCCcceeE
Confidence 4455999999999999999999999999876554 37888888887744 3799999999
Q ss_pred EEEcCCCcEEEEEecCCCccc--cccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCC
Q 000272 190 CVNTEDGGVISLDWPSNLDLH--EEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLF 267 (1744)
Q Consensus 190 ~L~t~DGG~IaLDW~~p~~~~--~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly 267 (1744)
+++++|||++++||..+++.. ...++.|+||+|||++|||++.|+++++..+++.||+|||+|+||||++++++|++|
T Consensus 97 ii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f 176 (409)
T KOG1838|consen 97 IIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLF 176 (409)
T ss_pred EEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCcee
Confidence 999999999999999775421 123567999999999999999999999999999999999999999999999999999
Q ss_pred CcCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhc---cCchhHHhHHH
Q 000272 268 TAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATR---SSPHHIALDEK 344 (1744)
Q Consensus 268 ~ag~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~---slp~~~ly~~~ 344 (1744)
++++++|++++++|++++||.++++++|+||||+++++|+||.++++++.|++++|+|||.....+ ...++++|++.
T Consensus 177 ~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~ 256 (409)
T KOG1838|consen 177 TAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRA 256 (409)
T ss_pred ecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999764333 23577899999
Q ss_pred HHHHHHHHHHhhhhhhhccCCCcCHHHHhhhhcHHHHHHHHhhhccchhhHHHHHhhcCcchhcCcCCccEEEEEe-CCC
Q 000272 345 LANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAG 423 (1744)
Q Consensus 345 L~~~Lk~~L~r~~~lf~~~~~~~Did~vlkarTirEFDd~~tap~~Gf~sv~eYY~~aS~~~~L~~IkVPVLIIhG-DDp 423 (1744)
++.++++++.+|+..+.. +..|.+.+.+++++||||+.++++.+||+++++||+++|+..++++|+||+|||++ |||
T Consensus 257 l~~~l~~~~~~~r~~~~~--~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~ina~DDP 334 (409)
T KOG1838|consen 257 LTLNLKRIVLRHRHTLFE--DPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLCINAADDP 334 (409)
T ss_pred HHHhHHHHHhhhhhhhhh--ccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccEEEEecCCCC
Confidence 999999999999884433 35788889999999999999999999999999999999999999999999999999 999
Q ss_pred CCCCCChHHHHHhcCCCeEEEEecCCCccccCCCC--chhHHHHHHHHHHHHHHHhhcccCCCCCCcccccccCC
Q 000272 424 AVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGGR--AAESWCQNLVIEWLSAVELGLLKGRHPLLKDVDVTINP 496 (1744)
Q Consensus 424 ~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~--~~~sWv~r~VlEFL~av~~~llkg~~p~~~d~~~~inp 496 (1744)
++|+.++|...+..||++.++++..|||++|.++. .+..|+.+.+.+|+..++..+..++++...++....+|
T Consensus 335 v~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (409)
T KOG1838|consen 335 VVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAIFQDEVGRHRPSDLEHVRSDP 409 (409)
T ss_pred CCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHHhhhcccccCcccccccccCC
Confidence 99999999999999999999999999999999885 66789999999999999999999999998888876654
No 2
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=100.00 E-value=1.8e-46 Score=429.20 Aligned_cols=313 Identities=26% Similarity=0.421 Sum_probs=278.4
Q ss_pred eecccCceeeEeccccCCCCccccccCCcceEEEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHH
Q 000272 156 VRLNSGRIQARTGAVRDGGETESEMEGKLEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIR 235 (1744)
Q Consensus 156 ~tL~~GhlQTv~~a~~~~~~~~~~~~p~V~YeRe~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr 235 (1744)
..|+|||+||++.+++. ..+.+.+.|+||++.++||+.+.+||..++ .....|.||++||++|++.+.|++
T Consensus 24 ~~L~ng~lqTl~~~~~~-----frr~~~~~~~re~v~~pdg~~~~ldw~~~p----~~~~~P~vVl~HGL~G~s~s~y~r 94 (345)
T COG0429 24 WGLFNGHLQTLYPSLRL-----FRRKPKVAYTRERLETPDGGFIDLDWSEDP----RAAKKPLVVLFHGLEGSSNSPYAR 94 (345)
T ss_pred ccccCcchhhhhhhHHH-----hhcccccccceEEEEcCCCCEEEEeeccCc----cccCCceEEEEeccCCCCcCHHHH
Confidence 45789999999985432 123788999999999999999999999863 234468999999999999999999
Q ss_pred HHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCC
Q 000272 236 LFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTP 315 (1744)
Q Consensus 236 ~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~ 315 (1744)
.+++.+.++||.||++|+|||++++.++|++|+.++++|++.++++++.++|..++++||+||||+++++|+++.+++.+
T Consensus 95 ~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~ 174 (345)
T COG0429 95 GLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLP 174 (345)
T ss_pred HHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEecCCCChhhhhccC--chh-HHhHHHHHHHHHHHHHhhhhhhhccCCCcC-HHHHhhhhcHHHHHHHHhhhccc
Q 000272 316 LTAVTCIDNPFDLEEATRSS--PHH-IALDEKLANGLIDILRSNKELFKGRAKGFD-VEKALSAKSVRDFEKAISMVSYG 391 (1744)
Q Consensus 316 L~AaVlISpP~Dl~es~~sl--p~~-~ly~~~L~~~Lk~~L~r~~~lf~~~~~~~D-id~vlkarTirEFDd~~tap~~G 391 (1744)
+.+++++|+|||+..+...+ .+. ++|.+++.+.|++.+.++...+.+.. +.+ .+.+.++++++|||+.+|++.+|
T Consensus 175 ~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~-p~~~~~~ik~~~ti~eFD~~~Tap~~G 253 (345)
T COG0429 175 LDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSL-PGTVLAAIKRCRTIREFDDLLTAPLHG 253 (345)
T ss_pred cceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCccc-CcHHHHHHHhhchHHhccceeeecccC
Confidence 99999999999998776543 344 89999999999999998887774322 233 67788899999999999999999
Q ss_pred hhhHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCccccCCCCchh--HHHHHHH
Q 000272 392 FEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGGRAAE--SWCQNLV 468 (1744)
Q Consensus 392 f~sv~eYY~~aS~~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~~~~--sWv~r~V 468 (1744)
|++++|||+.+|+...|.+|++|+|+||+ |||+++++.+|......+|++.+.+++.|||.+|..+.... -|..+++
T Consensus 254 f~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri 333 (345)
T COG0429 254 FADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRI 333 (345)
T ss_pred CCcHHHHHHhccccccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHH
Confidence 99999999999999999999999999999 99999999999877669999999999999999999864323 3999999
Q ss_pred HHHHHHHHhh
Q 000272 469 IEWLSAVELG 478 (1744)
Q Consensus 469 lEFL~av~~~ 478 (1744)
.+||+.+.+.
T Consensus 334 ~~~l~~~~~~ 343 (345)
T COG0429 334 LDWLDPFLEA 343 (345)
T ss_pred HHHHHHHHhh
Confidence 9999987653
No 3
>PLN02511 hydrolase
Probab=100.00 E-value=2.9e-43 Score=422.25 Aligned_cols=335 Identities=30% Similarity=0.516 Sum_probs=279.1
Q ss_pred hhHHHHHhcCCcccccCCCchhhhhccccccccceeecccCceeeEeccccCCCCccccccCCcceEEEEEEcCCCcEEE
Q 000272 121 AFNRFVLLRCPSISFEGSDLLEDVNEKLVKEDTHFVRLNSGRIQARTGAVRDGGETESEMEGKLEYQRVCVNTEDGGVIS 200 (1744)
Q Consensus 121 ~f~~fLl~~CPsLs~~y~p~~~~~~~~l~~~~~h~~tL~~GhlQTv~~a~~~~~~~~~~~~p~V~YeRe~L~t~DGG~Ia 200 (1744)
.+++||+++||+|...|.|++| |.|||+||++..... ..+.+.|+|+.+.++||+.+.
T Consensus 28 ~~~~~~~~~~~~l~~~y~p~~w---------------l~n~h~qT~~~~~~~-------~~~~~~~~re~l~~~DG~~~~ 85 (388)
T PLN02511 28 GGRDSFLPKFKSLERPYDAFPL---------------LGNRHVETIFASFFR-------SLPAVRYRRECLRTPDGGAVA 85 (388)
T ss_pred chHHHHHHhhhhhcCCccCCcc---------------CCCccHHHhhHHHhc-------CCCCCceeEEEEECCCCCEEE
Confidence 3599999999999998987644 358999999987643 267899999999999999999
Q ss_pred EEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHH
Q 000272 201 LDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQ 280 (1744)
Q Consensus 201 LDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId 280 (1744)
+||...... ....++|+||++||++|++...|++.++..+.++||+|+++|+||||+|+...++.|+.++++|+.++++
T Consensus 86 ldw~~~~~~-~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~ 164 (388)
T PLN02511 86 LDWVSGDDR-ALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVD 164 (388)
T ss_pred EEecCcccc-cCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHH
Confidence 999864210 1123568999999998877777888899889999999999999999999888888888899999999999
Q ss_pred HHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccC--chhHHhHHHHHHHHHHHHHhhhh
Q 000272 281 FIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSS--PHHIALDEKLANGLIDILRSNKE 358 (1744)
Q Consensus 281 ~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~sl--p~~~ly~~~L~~~Lk~~L~r~~~ 358 (1744)
+++.++|..+++++||||||+++++|++++++..+|.+++++++|+++..+...+ ....+|...+...+++.+.++..
T Consensus 165 ~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~ 244 (388)
T PLN02511 165 HVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNNVYDKALAKALRKIFAKHAL 244 (388)
T ss_pred HHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999889999999999999999999999876799999999999875433221 23456777777777766665555
Q ss_pred hhhccCCCcCHHHHhhhhcHHHHHHHHhhhccchhhHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhc
Q 000272 359 LFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAE 437 (1744)
Q Consensus 359 lf~~~~~~~Did~vlkarTirEFDd~~tap~~Gf~sv~eYY~~aS~~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la~~ 437 (1744)
.+......++...+.+.+++++||+.++.+.+||.+.++||+..++...+++|++|+|+|+| +|+++|....+...+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~ 324 (388)
T PLN02511 245 LFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKA 324 (388)
T ss_pred HHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhc
Confidence 55432223566667778999999999999999999999999999999999999999999999 99999987766656678
Q ss_pred CCCeEEEEecCCCccccCCCCc---hhHHHHHHHHHHHHHHHhh
Q 000272 438 NPFTSLLLCSCLPSSVIGGGRA---AESWCQNLVIEWLSAVELG 478 (1744)
Q Consensus 438 nPnv~LvLt~gGHH~gF~e~~~---~~sWv~r~VlEFL~av~~~ 478 (1744)
+|++.++++++|||+.|.+... ...|+++.+.+||+.+...
T Consensus 325 ~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~~ 368 (388)
T PLN02511 325 NPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEEG 368 (388)
T ss_pred CCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHHh
Confidence 9999999999999999887642 2469999999999988755
No 4
>PRK10985 putative hydrolase; Provisional
Probab=100.00 E-value=1.2e-37 Score=364.46 Aligned_cols=307 Identities=21% Similarity=0.329 Sum_probs=251.4
Q ss_pred cccCceeeEeccccCCCCccccccCCcceEEEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHH
Q 000272 158 LNSGRIQARTGAVRDGGETESEMEGKLEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLF 237 (1744)
Q Consensus 158 L~~GhlQTv~~a~~~~~~~~~~~~p~V~YeRe~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~L 237 (1744)
+.|||+||++..... ..+.+.++|+.++++||+.+.++|...++ ....+|+||++||++|++...|++.+
T Consensus 10 ~~~~h~qt~~~~~~~-------~~~~~~~~~~~~~~~dg~~~~l~w~~~~~---~~~~~p~vll~HG~~g~~~~~~~~~~ 79 (324)
T PRK10985 10 ASNPHLQTLLPRLIR-------RKVLFTPYWQRLELPDGDFVDLAWSEDPA---QARHKPRLVLFHGLEGSFNSPYAHGL 79 (324)
T ss_pred CCCCcHHHhhHHHhc-------CCCCCCcceeEEECCCCCEEEEecCCCCc---cCCCCCEEEEeCCCCCCCcCHHHHHH
Confidence 358999999986643 26778999999999999999999975431 22346899999999776666688889
Q ss_pred HHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCce
Q 000272 238 VCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLT 317 (1744)
Q Consensus 238 a~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~ 317 (1744)
+..+.++||+|+++|+||||+++...++.|..+.++|+..++++++++++..+++++||||||++++.|+++++++.++.
T Consensus 80 ~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~ 159 (324)
T PRK10985 80 LEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLD 159 (324)
T ss_pred HHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCcc
Confidence 99999999999999999999988766777877889999999999999888889999999999999999999987655689
Q ss_pred EEEEecCCCChhhhhccC--chhHHhHHHHHHHHHHHHHhhhhhhhccCCCcCHHHHhhhhcHHHHHHHHhhhccchhhH
Q 000272 318 AVTCIDNPFDLEEATRSS--PHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAI 395 (1744)
Q Consensus 318 AaVlISpP~Dl~es~~sl--p~~~ly~~~L~~~Lk~~L~r~~~lf~~~~~~~Did~vlkarTirEFDd~~tap~~Gf~sv 395 (1744)
+++++++|+++..+...+ ....+|.+.+...+++.+.+....+++. ...+.+.+...+++++||+.++++.+||.+.
T Consensus 160 ~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~ 238 (324)
T PRK10985 160 AAVIVSAPLMLEACSYRMEQGFSRVYQRYLLNLLKANAARKLAAYPGT-LPINLAQLKSVRRLREFDDLITARIHGFADA 238 (324)
T ss_pred EEEEEcCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccc-ccCCHHHHhcCCcHHHHhhhheeccCCCCCH
Confidence 999999999987654321 2334566666666665554444444432 2456777888899999999999999999999
Q ss_pred HHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCccccCCCC--chhHHHHHHHHHHH
Q 000272 396 EDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGGR--AAESWCQNLVIEWL 472 (1744)
Q Consensus 396 ~eYY~~aS~~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~--~~~sWv~r~VlEFL 472 (1744)
.+||...+....+++|++|+|+|+| +|+++|+...+.. .+.+|++.++++++|||+.|.++. ....|+++.+.+||
T Consensus 239 ~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~-~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~ 317 (324)
T PRK10985 239 IDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKP-ESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWL 317 (324)
T ss_pred HHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChHH-HHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHH
Confidence 9999999988999999999999999 9999987666543 456789999999998888887753 45689999999999
Q ss_pred HHHH
Q 000272 473 SAVE 476 (1744)
Q Consensus 473 ~av~ 476 (1744)
..+.
T Consensus 318 ~~~~ 321 (324)
T PRK10985 318 TTYL 321 (324)
T ss_pred HHhh
Confidence 8664
No 5
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.84 E-value=1.5e-19 Score=213.85 Aligned_cols=276 Identities=11% Similarity=0.085 Sum_probs=159.7
Q ss_pred CcceEEEEEEcCCCcEEEEE-ecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC
Q 000272 183 KLEYQRVCVNTEDGGVISLD-WPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPL 261 (1744)
Q Consensus 183 ~V~YeRe~L~t~DGG~IaLD-W~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpl 261 (1744)
.+.+++.++...||..+.+. |... ....+++||++||++ ++...|++.++..++++||+|+++|+||||.|..
T Consensus 58 ~~~~~~~~~~~~~g~~l~~~~~~p~-----~~~~~~~iv~lHG~~-~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~ 131 (349)
T PLN02385 58 GIKTEESYEVNSRGVEIFSKSWLPE-----NSRPKAAVCFCHGYG-DTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEG 131 (349)
T ss_pred CcceeeeeEEcCCCCEEEEEEEecC-----CCCCCeEEEEECCCC-CccchHHHHHHHHHHhCCCEEEEecCCCCCCCCC
Confidence 35566666667788777654 5532 112468899999984 4444567788888988999999999999999975
Q ss_pred CCCCCCC-cCcHHHHHHHHHHHHhh--CCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchh
Q 000272 262 TTSRLFT-AADSDDICTAIQFIGKA--RPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHH 338 (1744)
Q Consensus 262 tsprly~-ag~tdDL~aaId~Lrkr--yP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~ 338 (1744)
.....+. ..+.+|+.++++++..+ ++..+++++||||||++++.++.++++ .+.++|++++........... .
T Consensus 132 ~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~--~v~glVLi~p~~~~~~~~~~~--~ 207 (349)
T PLN02385 132 LHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPN--AWDGAILVAPMCKIADDVVPP--P 207 (349)
T ss_pred CCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcc--hhhheeEecccccccccccCc--h
Confidence 3222222 23467888888887653 345689999999999999999998875 589999998765433211110 0
Q ss_pred HHhHHHHHHHHHHHHHhhhhhhhccCCCcCHHHHhhhhcHHHHHHH---HhhhccchhhHHHHHhhc-CcchhcCcCCcc
Q 000272 339 IALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKA---ISMVSYGFEAIEDFYSKS-STRSVVGNIKIP 414 (1744)
Q Consensus 339 ~ly~~~L~~~Lk~~L~r~~~lf~~~~~~~Did~vlkarTirEFDd~---~tap~~Gf~sv~eYY~~a-S~~~~L~~IkVP 414 (1744)
... .+...+...+.. ..+++.. .+ .+........++.... .......+....++++.. .....+.+|++|
T Consensus 208 -~~~-~~~~~~~~~~p~-~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P 281 (349)
T PLN02385 208 -LVL-QILILLANLLPK-AKLVPQK--DL-AELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLP 281 (349)
T ss_pred -HHH-HHHHHHHHHCCC-ceecCCC--cc-ccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCC
Confidence 000 011111111000 0000000 00 0000000000000000 000000111222223221 223557889999
Q ss_pred EEEEEe-CCCCCCCCChHHHHHhc--CCCeEEEEecCCCccccCCCCch-hHHHHHHHHHHHHHH
Q 000272 415 VLFIQN-DAGAVPPFSIPRSSIAE--NPFTSLLLCSCLPSSVIGGGRAA-ESWCQNLVIEWLSAV 475 (1744)
Q Consensus 415 VLIIhG-DDp~VP~~aip~~la~~--nPnv~LvLt~gGHH~gF~e~~~~-~sWv~r~VlEFL~av 475 (1744)
+|+|+| +|.++|+..... .... +++.++.++++++|..+.+.... ..-+...+.+||+..
T Consensus 282 ~Lii~G~~D~vv~~~~~~~-l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~ 345 (349)
T PLN02385 282 LLILHGEADKVTDPSVSKF-LYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSH 345 (349)
T ss_pred EEEEEeCCCCccChHHHHH-HHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHh
Confidence 999999 999998765433 2233 46789999999999877654322 122567788999765
No 6
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.84 E-value=1.2e-19 Score=212.25 Aligned_cols=275 Identities=9% Similarity=0.089 Sum_probs=161.2
Q ss_pred cceEEEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q 000272 184 LEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTT 263 (1744)
Q Consensus 184 V~YeRe~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSplts 263 (1744)
+.++...+.+.||..+.+..+.+.. .....++||++||+++ +...++..++..+.++||+|+++|+||||.|....
T Consensus 30 ~~~~~~~~~~~dg~~l~~~~~~~~~---~~~~~~~VvllHG~~~-~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~ 105 (330)
T PLN02298 30 IKGSKSFFTSPRGLSLFTRSWLPSS---SSPPRALIFMVHGYGN-DISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLR 105 (330)
T ss_pred CccccceEEcCCCCEEEEEEEecCC---CCCCceEEEEEcCCCC-CcceehhHHHHHHHhCCCEEEEecCCCCCCCCCcc
Confidence 6778888999999999985333211 1124578999999843 33334566777888999999999999999986322
Q ss_pred CCCCC-cCcHHHHHHHHHHHHhh--CCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHH
Q 000272 264 SRLFT-AADSDDICTAIQFIGKA--RPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIA 340 (1744)
Q Consensus 264 prly~-ag~tdDL~aaId~Lrkr--yP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~l 340 (1744)
..... ....+|+.+++++++.+ ++..+++++||||||++++.++.++++ .+.++|++++.......... . +.
T Consensus 106 ~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~-~--~~ 180 (330)
T PLN02298 106 AYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPE--GFDGAVLVAPMCKISDKIRP-P--WP 180 (330)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcc--cceeEEEecccccCCcccCC-c--hH
Confidence 21111 22468999999999764 345689999999999999999988765 58999999876654322110 0 00
Q ss_pred hHHHHHHHHHHHHHhhhhhhhccCCCcCHHHHhhhhcHHHHHHHHhhhccchh------hHHHHHhhcC-cchhcCcCCc
Q 000272 341 LDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFE------AIEDFYSKSS-TRSVVGNIKI 413 (1744)
Q Consensus 341 y~~~L~~~Lk~~L~r~~~lf~~~~~~~Did~vlkarTirEFDd~~tap~~Gf~------sv~eYY~~aS-~~~~L~~IkV 413 (1744)
... +...+.+.... ...... ...++ ..........+.. .....|. ...+.++... ....+.+|++
T Consensus 181 ~~~-~~~~~~~~~~~-~~~~~~-~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 252 (330)
T PLN02298 181 IPQ-ILTFVARFLPT-LAIVPT-ADLLE--KSVKVPAKKIIAK---RNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSI 252 (330)
T ss_pred HHH-HHHHHHHHCCC-CccccC-CCccc--ccccCHHHHHHHH---hCccccCCCccHHHHHHHHHHHHHHHHhhhhcCC
Confidence 000 00001111100 000000 00000 0000000000000 0000010 0111111111 2345788999
Q ss_pred cEEEEEe-CCCCCCCCChHHHHHh--cCCCeEEEEecCCCccccCCCCc-hhHHHHHHHHHHHHHHH
Q 000272 414 PVLFIQN-DAGAVPPFSIPRSSIA--ENPFTSLLLCSCLPSSVIGGGRA-AESWCQNLVIEWLSAVE 476 (1744)
Q Consensus 414 PVLIIhG-DDp~VP~~aip~~la~--~nPnv~LvLt~gGHH~gF~e~~~-~~sWv~r~VlEFL~av~ 476 (1744)
|+|+||| +|+++|+..... .+. ..++.+++++++++|..+.+... ....+.+.+.+||.+..
T Consensus 253 PvLii~G~~D~ivp~~~~~~-l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~ 318 (330)
T PLN02298 253 PFIVLHGSADVVTDPDVSRA-LYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERC 318 (330)
T ss_pred CEEEEecCCCCCCCHHHHHH-HHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhc
Confidence 9999999 999999865433 222 24678999999988877654332 22446678889988753
No 7
>PHA02857 monoglyceride lipase; Provisional
Probab=99.84 E-value=1.7e-19 Score=204.60 Aligned_cols=262 Identities=13% Similarity=0.108 Sum_probs=156.4
Q ss_pred EEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCC-
Q 000272 190 CVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFT- 268 (1744)
Q Consensus 190 ~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~- 268 (1744)
++...||..+.+.++.+. ...+++|+++||+. ++ ..++..++.++.++||+|+++|+||||.|+........
T Consensus 4 ~~~~~~g~~l~~~~~~~~-----~~~~~~v~llHG~~-~~-~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~ 76 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPI-----TYPKALVFISHGAG-EH-SGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDF 76 (276)
T ss_pred eeecCCCCEEEEEeccCC-----CCCCEEEEEeCCCc-cc-cchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCH
Confidence 456679999998755442 23457788889984 33 44567889999999999999999999998643211111
Q ss_pred cCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHhHHHHHHH
Q 000272 269 AADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANG 348 (1744)
Q Consensus 269 ag~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly~~~L~~~ 348 (1744)
..+.+|+...+++++.+++..+++++||||||++++.++.++++ .++++|++++..+.. ..+... .+...
T Consensus 77 ~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~--~i~~lil~~p~~~~~----~~~~~~----~~~~~ 146 (276)
T PHA02857 77 GVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPN--LFTAMILMSPLVNAE----AVPRLN----LLAAK 146 (276)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCcc--ccceEEEeccccccc----cccHHH----HHHHH
Confidence 12457888888888877887899999999999999999988765 589999998865521 111111 11111
Q ss_pred HHHHHHhhhhhhhccCCCcCHHHHhhhhcHHHHHHHHhhhcc-----chhhHHHHHhh-cCcchhcCcCCccEEEEEe-C
Q 000272 349 LIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSY-----GFEAIEDFYSK-SSTRSVVGNIKIPVLFIQN-D 421 (1744)
Q Consensus 349 Lk~~L~r~~~lf~~~~~~~Did~vlkarTirEFDd~~tap~~-----Gf~sv~eYY~~-aS~~~~L~~IkVPVLIIhG-D 421 (1744)
+........ .. ..+..+.+ .+...+.......+.. ...-..+.+.. ......+.+|++|+|+|+| +
T Consensus 147 ~~~~~~~~~-~~----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~ 219 (276)
T PHA02857 147 LMGIFYPNK-IV----GKLCPESV--SRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTN 219 (276)
T ss_pred HHHHhCCCC-cc----CCCCHhhc--cCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCC
Confidence 111100000 00 00111100 0001110011111100 00000111110 1123568899999999999 9
Q ss_pred CCCCCCCChHHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHH
Q 000272 422 AGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAV 475 (1744)
Q Consensus 422 Dp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av 475 (1744)
|.++|+...........+++++.++++++|....+......-+.+.+.+||+..
T Consensus 220 D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 220 NEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred CCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 999998755432222235789999999888877764432334568888999864
No 8
>PRK10749 lysophospholipase L2; Provisional
Probab=99.78 E-value=5.1e-18 Score=199.75 Aligned_cols=271 Identities=14% Similarity=0.136 Sum_probs=153.4
Q ss_pred EEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC--
Q 000272 188 RVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSR-- 265 (1744)
Q Consensus 188 Re~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltspr-- 265 (1744)
...+...||..+.+....+. ..+++||++||++ ++.. .++.++..++++||+|+++|+||||.|......
T Consensus 32 ~~~~~~~~g~~l~~~~~~~~------~~~~~vll~HG~~-~~~~-~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~ 103 (330)
T PRK10749 32 EAEFTGVDDIPIRFVRFRAP------HHDRVVVICPGRI-ESYV-KYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPH 103 (330)
T ss_pred ceEEEcCCCCEEEEEEccCC------CCCcEEEEECCcc-chHH-HHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCC
Confidence 34456678887777543321 2357899999984 3333 345678788899999999999999999643211
Q ss_pred ---CCC-cCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHh
Q 000272 266 ---LFT-AADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIAL 341 (1744)
Q Consensus 266 ---ly~-ag~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly 341 (1744)
.+. ..+.+|+.++++++...++..+++++||||||.+++.|+.++++ .++++|++++.......... ...
T Consensus 104 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~--~v~~lvl~~p~~~~~~~~~~----~~~ 177 (330)
T PRK10749 104 RGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPG--VFDAIALCAPMFGIVLPLPS----WMA 177 (330)
T ss_pred cCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCC--CcceEEEECchhccCCCCCc----HHH
Confidence 111 23467899999888776677899999999999999999998875 58888888776543211110 000
Q ss_pred HHHHHHHHHHH--HHhhhhhhhccCC--CcCHHHHhhhh-cHHHHHHHHh-hhcc-----chhhHHHHHhh-cCcchhcC
Q 000272 342 DEKLANGLIDI--LRSNKELFKGRAK--GFDVEKALSAK-SVRDFEKAIS-MVSY-----GFEAIEDFYSK-SSTRSVVG 409 (1744)
Q Consensus 342 ~~~L~~~Lk~~--L~r~~~lf~~~~~--~~Did~vlkar-TirEFDd~~t-ap~~-----Gf~sv~eYY~~-aS~~~~L~ 409 (1744)
..+...+... +............ .+..+.+.... ....+-+.+. .+.. .+....+.+.. ......+.
T Consensus 178 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (330)
T PRK10749 178 -RRILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAG 256 (330)
T ss_pred -HHHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhcc
Confidence 0011111000 0000000000000 00000000000 0011111111 1110 11112222211 11235578
Q ss_pred cCCccEEEEEe-CCCCCCCCChHHHHHhc-------CCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHH
Q 000272 410 NIKIPVLFIQN-DAGAVPPFSIPRSSIAE-------NPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSA 474 (1744)
Q Consensus 410 ~IkVPVLIIhG-DDp~VP~~aip~~la~~-------nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~a 474 (1744)
++++|+|+|+| +|+++|+..... .+.. .++++++++++++|..+.+......-+...|.+||+.
T Consensus 257 ~i~~P~Lii~G~~D~vv~~~~~~~-~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 257 DITTPLLLLQAEEERVVDNRMHDR-FCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNR 328 (330)
T ss_pred CCCCCEEEEEeCCCeeeCHHHHHH-HHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhh
Confidence 89999999999 999999754322 1221 2567899999988887776432233355788889864
No 9
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.78 E-value=1.1e-17 Score=195.68 Aligned_cols=271 Identities=17% Similarity=0.172 Sum_probs=167.9
Q ss_pred ceEEEEEEcCCCcEEEEE-ecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCC-CC
Q 000272 185 EYQRVCVNTEDGGVISLD-WPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSP-LT 262 (1744)
Q Consensus 185 ~YeRe~L~t~DGG~IaLD-W~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSp-lt 262 (1744)
...+..+...||..+.+. |..+. ....+||++||+.+ ....| ..++..+..+||.|+++|+||||.|+ ..
T Consensus 8 ~~~~~~~~~~d~~~~~~~~~~~~~------~~~g~Vvl~HG~~E-h~~ry-~~la~~l~~~G~~V~~~D~RGhG~S~r~~ 79 (298)
T COG2267 8 TRTEGYFTGADGTRLRYRTWAAPE------PPKGVVVLVHGLGE-HSGRY-EELADDLAARGFDVYALDLRGHGRSPRGQ 79 (298)
T ss_pred ccccceeecCCCceEEEEeecCCC------CCCcEEEEecCchH-HHHHH-HHHHHHHHhCCCEEEEecCCCCCCCCCCC
Confidence 345567788899988876 55331 12378999999843 33344 46899999999999999999999997 32
Q ss_pred CCCCCC-cCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHh
Q 000272 263 TSRLFT-AADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIAL 341 (1744)
Q Consensus 263 sprly~-ag~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly 341 (1744)
....-. ..+.+|+.++++.+...++..|++++||||||.|++.|+.+++ .++.++|+.+|.+.+..... ....
T Consensus 80 rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~--~~i~~~vLssP~~~l~~~~~----~~~~ 153 (298)
T COG2267 80 RGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYP--PRIDGLVLSSPALGLGGAIL----RLIL 153 (298)
T ss_pred cCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCC--ccccEEEEECccccCChhHH----HHHH
Confidence 222221 2346899999999988888899999999999999999999987 47999999888887763000 0001
Q ss_pred HHHHHHHHHHHHHhhhhhhhccC---CCcCHHHHhhhhcHHHHHHHHhhhc--cc---hhhHHHHHhhcC--cchhcCcC
Q 000272 342 DEKLANGLIDILRSNKELFKGRA---KGFDVEKALSAKSVRDFEKAISMVS--YG---FEAIEDFYSKSS--TRSVVGNI 411 (1744)
Q Consensus 342 ~~~L~~~Lk~~L~r~~~lf~~~~---~~~Did~vlkarTirEFDd~~tap~--~G---f~sv~eYY~~aS--~~~~L~~I 411 (1744)
.......+.++. ..+.-.. .....+.+ ++..+..+..-..|. .+ +..+..+..... .......+
T Consensus 154 ~~~~~~~~~~~~----p~~~~~~~~~~~~~~~~~--sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~ 227 (298)
T COG2267 154 ARLALKLLGRIR----PKLPVDSNLLEGVLTDDL--SRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAI 227 (298)
T ss_pred HHHhcccccccc----cccccCcccccCcCcchh--hcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccc
Confidence 111111111110 0000000 01111111 111111111111221 11 112333333333 34557788
Q ss_pred CccEEEEEe-CCCCCC-CCChH-HHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHH
Q 000272 412 KIPVLFIQN-DAGAVP-PFSIP-RSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAV 475 (1744)
Q Consensus 412 kVPVLIIhG-DDp~VP-~~aip-~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av 475 (1744)
++|+|+++| +|.+++ ..... .......|++++.+++++-|-.+.+......-+.+.+.+||...
T Consensus 228 ~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~ 294 (298)
T COG2267 228 ALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEA 294 (298)
T ss_pred cCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhh
Confidence 999999999 899988 44433 33445678899999999888777775442233457788888654
No 10
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.78 E-value=1.3e-17 Score=191.53 Aligned_cols=260 Identities=11% Similarity=0.086 Sum_probs=146.6
Q ss_pred EEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCC
Q 000272 188 RVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLF 267 (1744)
Q Consensus 188 Re~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly 267 (1744)
...++. ||..+.+... +.+++||++||+. ++. ..|+.++..|.+++ +|+++|+||||.|+.......
T Consensus 9 ~~~~~~-~g~~i~y~~~---------G~g~~vvllHG~~-~~~-~~w~~~~~~L~~~~-~via~D~~G~G~S~~~~~~~~ 75 (295)
T PRK03592 9 MRRVEV-LGSRMAYIET---------GEGDPIVFLHGNP-TSS-YLWRNIIPHLAGLG-RCLAPDLIGMGASDKPDIDYT 75 (295)
T ss_pred ceEEEE-CCEEEEEEEe---------CCCCEEEEECCCC-CCH-HHHHHHHHHHhhCC-EEEEEcCCCCCCCCCCCCCCC
Confidence 344444 7777765433 2357899999984 343 34667888888775 999999999999975433222
Q ss_pred CcCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCc--hhHHhHHHH
Q 000272 268 TAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSP--HHIALDEKL 345 (1744)
Q Consensus 268 ~ag~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp--~~~ly~~~L 345 (1744)
...+.+|+.++++++. ..+++++||||||.+++.++.++|+ .++++++++++..... ...+. ....+. .+
T Consensus 76 ~~~~a~dl~~ll~~l~----~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lil~~~~~~~~~-~~~~~~~~~~~~~-~~ 147 (295)
T PRK03592 76 FADHARYLDAWFDALG----LDDVVLVGHDWGSALGFDWAARHPD--RVRGIAFMEAIVRPMT-WDDFPPAVRELFQ-AL 147 (295)
T ss_pred HHHHHHHHHHHHHHhC----CCCeEEEEECHHHHHHHHHHHhChh--heeEEEEECCCCCCcc-hhhcchhHHHHHH-HH
Confidence 2234577777777663 3689999999999999999999876 5899998886432211 00000 000000 00
Q ss_pred HH-HHHH-HHH-h---hhhhhhccC-CCcCHHHHhhhhcHHHHHHHHhhhccchhhHHHHHhhc--------------Cc
Q 000272 346 AN-GLID-ILR-S---NKELFKGRA-KGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKS--------------ST 404 (1744)
Q Consensus 346 ~~-~Lk~-~L~-r---~~~lf~~~~-~~~Did~vlkarTirEFDd~~tap~~Gf~sv~eYY~~a--------------S~ 404 (1744)
.. .+.. .+. . ....+.... ..+..+.+ ..+...+..+ .......++++.. ..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (295)
T PRK03592 148 RSPGEGEEMVLEENVFIERVLPGSILRPLSDEEM------AVYRRPFPTP-ESRRPTLSWPRELPIDGEPADVVALVEEY 220 (295)
T ss_pred hCcccccccccchhhHHhhcccCcccccCCHHHH------HHHHhhcCCc-hhhhhhhhhhhhcCCCCcchhhHhhhhHh
Confidence 00 0000 000 0 000000000 00111100 0000000000 0000011111110 01
Q ss_pred chhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHHHhh
Q 000272 405 RSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVELG 478 (1744)
Q Consensus 405 ~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~~~ 478 (1744)
...+.+|++|+|+|+| +|+++++...........++.++.+++++||..+.+. ...+.+.+.+|+.++..+
T Consensus 221 ~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~---p~~v~~~i~~fl~~~~~~ 292 (295)
T PRK03592 221 AQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDS---PEEIGAAIAAWLRRLRLA 292 (295)
T ss_pred HHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcC---HHHHHHHHHHHHHHhccc
Confidence 2457889999999999 8999855444333344567899999988888777653 446789999999877654
No 11
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.78 E-value=1.8e-17 Score=200.73 Aligned_cols=269 Identities=14% Similarity=0.135 Sum_probs=157.5
Q ss_pred ceEEEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC
Q 000272 185 EYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTS 264 (1744)
Q Consensus 185 ~YeRe~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsp 264 (1744)
.+....+..+||..+.+..+.+. ....+++||++||+++ + ...+..++..+.++||+|+++|+||||.|+....
T Consensus 109 ~~~~~~~~~~~~~~l~~~~~~p~----~~~~~~~Vl~lHG~~~-~-~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~ 182 (395)
T PLN02652 109 RWATSLFYGARRNALFCRSWAPA----AGEMRGILIIIHGLNE-H-SGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHG 182 (395)
T ss_pred eEEEEEEECCCCCEEEEEEecCC----CCCCceEEEEECCchH-H-HHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC
Confidence 34556677888887776533331 1223578999999843 3 3335688899999999999999999999975433
Q ss_pred CCCCc-CcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCC-CCCceEEEEecCCCChhhhhccCchhHHhH
Q 000272 265 RLFTA-ADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGE-RTPLTAVTCIDNPFDLEEATRSSPHHIALD 342 (1744)
Q Consensus 265 rly~a-g~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge-~s~L~AaVlISpP~Dl~es~~slp~~~ly~ 342 (1744)
..+.. ...+|+.++++++...++..+++++||||||.+++.++. +++ ...+.++|+.++.+.+.... +....+
T Consensus 183 ~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~---~~~~~~- 257 (395)
T PLN02652 183 YVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAH---PIVGAV- 257 (395)
T ss_pred CCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccch---HHHHHH-
Confidence 22222 235899999999998888789999999999999987764 443 23588888887765543211 000011
Q ss_pred HHHHHHHHHHHHhhhhhhhccCC-CcCHHHHhhhhcHHHHHHHHhhhc--cchh---hHHHHHhhcC-cchhcCcCCccE
Q 000272 343 EKLANGLIDILRSNKELFKGRAK-GFDVEKALSAKSVRDFEKAISMVS--YGFE---AIEDFYSKSS-TRSVVGNIKIPV 415 (1744)
Q Consensus 343 ~~L~~~Lk~~L~r~~~lf~~~~~-~~Did~vlkarTirEFDd~~tap~--~Gf~---sv~eYY~~aS-~~~~L~~IkVPV 415 (1744)
..+...+.... .+..... .... .+........+..+. .|+. ...+.++... ....+.+|++|+
T Consensus 258 ----~~l~~~~~p~~-~~~~~~~~~~~~-----s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPv 327 (395)
T PLN02652 258 ----APIFSLVAPRF-QFKGANKRGIPV-----SRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPF 327 (395)
T ss_pred ----HHHHHHhCCCC-cccCcccccCCc-----CCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCE
Confidence 01111110000 0100000 0000 000001111111110 0110 1111111111 235678999999
Q ss_pred EEEEe-CCCCCCCCChHHHHHh-cCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHHH
Q 000272 416 LFIQN-DAGAVPPFSIPRSSIA-ENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVE 476 (1744)
Q Consensus 416 LIIhG-DDp~VP~~aip~~la~-~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~ 476 (1744)
|+||| +|.++|+......... ..++..+.++++++|..+.+. . ...+.+.+.+||....
T Consensus 328 LIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~-~-~e~v~~~I~~FL~~~~ 388 (395)
T PLN02652 328 MVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEP-E-REEVGRDIIDWMEKRL 388 (395)
T ss_pred EEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCC-C-HHHHHHHHHHHHHHHh
Confidence 99999 9999997655432212 345678999999988776652 2 3345688999998654
No 12
>PRK13604 luxD acyl transferase; Provisional
Probab=99.76 E-value=2.5e-17 Score=192.09 Aligned_cols=247 Identities=12% Similarity=0.080 Sum_probs=153.5
Q ss_pred EEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCC-CCCCCCCCCC
Q 000272 188 RVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGC-GGSPLTTSRL 266 (1744)
Q Consensus 188 Re~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGh-GgSpltsprl 266 (1744)
...+.+.||..+...|..|.+ ......++||++||+++ .. .+...++.+|+++||.|+.||+||| |.|...-...
T Consensus 11 ~~~~~~~dG~~L~Gwl~~P~~--~~~~~~~~vIi~HGf~~-~~-~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~ 86 (307)
T PRK13604 11 DHVICLENGQSIRVWETLPKE--NSPKKNNTILIASGFAR-RM-DHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEF 86 (307)
T ss_pred hheEEcCCCCEEEEEEEcCcc--cCCCCCCEEEEeCCCCC-Ch-HHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccC
Confidence 346788999999865554421 12345689999999854 44 3467899999999999999999998 8885432222
Q ss_pred CCcCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHhHHHHH
Q 000272 267 FTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLA 346 (1744)
Q Consensus 267 y~ag~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly~~~L~ 346 (1744)
.......|+.++|+|++++. ..+++++||||||.+++..+++ .++.++|+.|+..++....+.
T Consensus 87 t~s~g~~Dl~aaid~lk~~~-~~~I~LiG~SmGgava~~~A~~----~~v~~lI~~sp~~~l~d~l~~------------ 149 (307)
T PRK13604 87 TMSIGKNSLLTVVDWLNTRG-INNLGLIAASLSARIAYEVINE----IDLSFLITAVGVVNLRDTLER------------ 149 (307)
T ss_pred cccccHHHHHHHHHHHHhcC-CCceEEEEECHHHHHHHHHhcC----CCCCEEEEcCCcccHHHHHHH------------
Confidence 12223689999999998864 4689999999999997555543 247888888887776532211
Q ss_pred HHHHHHHHhhhhhhhccC--CCcCHHHHhhhhcHHHHHHHHhhhccchhhHHHHHhhcCcchhcCcCCccEEEEEe-CCC
Q 000272 347 NGLIDILRSNKELFKGRA--KGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAG 423 (1744)
Q Consensus 347 ~~Lk~~L~r~~~lf~~~~--~~~Did~vlkarTirEFDd~~tap~~Gf~sv~eYY~~aS~~~~L~~IkVPVLIIhG-DDp 423 (1744)
.+..... .++-.. ...|..... -....|-.... .++ ++...++.+.+.++++|+|+||| +|+
T Consensus 150 -~~~~~~~----~~p~~~lp~~~d~~g~~--l~~~~f~~~~~--~~~------~~~~~s~i~~~~~l~~PvLiIHG~~D~ 214 (307)
T PRK13604 150 -ALGYDYL----SLPIDELPEDLDFEGHN--LGSEVFVTDCF--KHG------WDTLDSTINKMKGLDIPFIAFTANNDS 214 (307)
T ss_pred -hhhcccc----cCccccccccccccccc--ccHHHHHHHHH--hcC------ccccccHHHHHhhcCCCEEEEEcCCCC
Confidence 1110000 000000 000100000 00011111000 001 11223456778888999999999 999
Q ss_pred CCCCCChHH-HHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHHHhh
Q 000272 424 AVPPFSIPR-SSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVELG 478 (1744)
Q Consensus 424 ~VP~~aip~-~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~~~ 478 (1744)
+||+..... .......+..+.+++++.|.+.+. ...+..|.+.+-.+
T Consensus 215 lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~~--------~~~~~~~~~~~~~~ 262 (307)
T PRK13604 215 WVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGEN--------LVVLRNFYQSVTKA 262 (307)
T ss_pred ccCHHHHHHHHHHhccCCcEEEEeCCCccccCcc--------hHHHHHHHHHHHHH
Confidence 999865533 222334678999999999977664 13566777776555
No 13
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.76 E-value=8.9e-17 Score=184.62 Aligned_cols=254 Identities=13% Similarity=0.089 Sum_probs=143.6
Q ss_pred EEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC--
Q 000272 188 RVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSR-- 265 (1744)
Q Consensus 188 Re~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltspr-- 265 (1744)
..+++. ||..+.+....+ .+++||++||+++ +.. .|+.++..+.++ |+|+++|+||||.|+...+.
T Consensus 10 ~~~~~~-~~~~i~y~~~G~--------~~~~vlllHG~~~-~~~-~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~ 77 (294)
T PLN02824 10 TRTWRW-KGYNIRYQRAGT--------SGPALVLVHGFGG-NAD-HWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSA 77 (294)
T ss_pred CceEEE-cCeEEEEEEcCC--------CCCeEEEECCCCC-Chh-HHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccc
Confidence 334444 566676543321 2478999999854 433 356777777766 79999999999999754321
Q ss_pred ----CCCc-CcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccC-chhH
Q 000272 266 ----LFTA-ADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSS-PHHI 339 (1744)
Q Consensus 266 ----ly~a-g~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~sl-p~~~ 339 (1744)
.|+. .+.+|+.++|+.+ ...+++++||||||.+++.++.++++ .+.++|+++++.......... ....
T Consensus 78 ~~~~~~~~~~~a~~l~~~l~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lili~~~~~~~~~~~~~~~~~~ 151 (294)
T PLN02824 78 PPNSFYTFETWGEQLNDFCSDV----VGDPAFVICNSVGGVVGLQAAVDAPE--LVRGVMLINISLRGLHIKKQPWLGRP 151 (294)
T ss_pred cccccCCHHHHHHHHHHHHHHh----cCCCeEEEEeCHHHHHHHHHHHhChh--heeEEEEECCCcccccccccchhhhH
Confidence 2322 3356666666655 34689999999999999999999886 689999998754221100000 0000
Q ss_pred H---hHHHHHH-HH-HHHHHh------hhhh----hhccCCCcCHHHHhhhhcHHHHHHHHhhhcc--c-hhhHHHHHhh
Q 000272 340 A---LDEKLAN-GL-IDILRS------NKEL----FKGRAKGFDVEKALSAKSVRDFEKAISMVSY--G-FEAIEDFYSK 401 (1744)
Q Consensus 340 l---y~~~L~~-~L-k~~L~r------~~~l----f~~~~~~~Did~vlkarTirEFDd~~tap~~--G-f~sv~eYY~~ 401 (1744)
+ +...+.. .. ..+... .... +... ...+. ++-+.+..+.. + .....+++..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (294)
T PLN02824 152 FIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDD-SAVTD----------ELVEAILRPGLEPGAVDVFLDFISY 220 (294)
T ss_pred HHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccCh-hhccH----------HHHHHHHhccCCchHHHHHHHHhcc
Confidence 0 0000000 00 000000 0000 0000 00010 00001111000 0 0001111110
Q ss_pred c---CcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHH
Q 000272 402 S---STRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSA 474 (1744)
Q Consensus 402 a---S~~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~a 474 (1744)
. .....+.+|++|+|+|+| +|+++|...... .....++.++++++++||..+.+. ...+.+.+.+||+.
T Consensus 221 ~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~-~~~~~~~~~~~~i~~~gH~~~~e~---p~~~~~~i~~fl~~ 293 (294)
T PLN02824 221 SGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRA-YANFDAVEDFIVLPGVGHCPQDEA---PELVNPLIESFVAR 293 (294)
T ss_pred ccccchHHHHhhcCCCeEEEEecCCCCCChHHHHH-HHhcCCccceEEeCCCCCChhhhC---HHHHHHHHHHHHhc
Confidence 0 123458899999999999 999998765433 455677789999998888776653 44578999999974
No 14
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.75 E-value=3.2e-17 Score=187.66 Aligned_cols=278 Identities=13% Similarity=0.128 Sum_probs=174.2
Q ss_pred CcceEEEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q 000272 183 KLEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLT 262 (1744)
Q Consensus 183 ~V~YeRe~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSplt 262 (1744)
.+.+...+++.++|..+...|..+.. ....+..|++|||+++.+ ...+..++..++..||.|+++|++|||+|...
T Consensus 24 ~~~~~~~~~~n~rG~~lft~~W~p~~---~~~pr~lv~~~HG~g~~~-s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl 99 (313)
T KOG1455|consen 24 GVTYSESFFTNPRGAKLFTQSWLPLS---GTEPRGLVFLCHGYGEHS-SWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGL 99 (313)
T ss_pred ccceeeeeEEcCCCCEeEEEecccCC---CCCCceEEEEEcCCcccc-hhhHHHHHHHHHhCCCeEEEeeccCCCcCCCC
Confidence 35566778899999877765444421 123467899999984433 23456789999999999999999999999765
Q ss_pred CCCCCCcC-cHHHHHHHHHHHHhh--CCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhH
Q 000272 263 TSRLFTAA-DSDDICTAIQFIGKA--RPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHI 339 (1744)
Q Consensus 263 sprly~ag-~tdDL~aaId~Lrkr--yP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ 339 (1744)
....-... -.+|+...++.++.+ ++..|.+++||||||+|++.++.+.|+ ...+++++++..-+.+..+..+...
T Consensus 100 ~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~--~w~G~ilvaPmc~i~~~~kp~p~v~ 177 (313)
T KOG1455|consen 100 HAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPN--FWDGAILVAPMCKISEDTKPHPPVI 177 (313)
T ss_pred cccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCc--ccccceeeecccccCCccCCCcHHH
Confidence 44433332 358888888886554 567799999999999999999988654 5888999888777766554322111
Q ss_pred HhHHHHHHHHHHHHHhhhhhhhccCCCcCHHHHhhhhcHHHH--HHHHhhhcc-chhhHHHHHhhcC-cchhcCcCCccE
Q 000272 340 ALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDF--EKAISMVSY-GFEAIEDFYSKSS-TRSVVGNIKIPV 415 (1744)
Q Consensus 340 ly~~~L~~~Lk~~L~r~~~lf~~~~~~~Did~vlkarTirEF--Dd~~tap~~-Gf~sv~eYY~~aS-~~~~L~~IkVPV 415 (1744)
. ++..+...+.+.+ ..+.. ...+.+.+....+.. ++.+..... -.++..++.+... ....+++|++|.
T Consensus 178 ~----~l~~l~~liP~wk-~vp~~---d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPf 249 (313)
T KOG1455|consen 178 S----ILTLLSKLIPTWK-IVPTK---DIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPF 249 (313)
T ss_pred H----HHHHHHHhCCcee-ecCCc---cccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccE
Confidence 1 1112222222222 11111 011122221111211 011110000 1233444444332 346689999999
Q ss_pred EEEEe-CCCCCCCCChH-HHHHhcCCCeEEEEecCCCccccC-CCCchhHHHHHHHHHHHHH
Q 000272 416 LFIQN-DAGAVPPFSIP-RSSIAENPFTSLLLCSCLPSSVIG-GGRAAESWCQNLVIEWLSA 474 (1744)
Q Consensus 416 LIIhG-DDp~VP~~aip-~~la~~nPnv~LvLt~gGHH~gF~-e~~~~~sWv~r~VlEFL~a 474 (1744)
|++|| +|.++.+.... ....+.+.+..+.+|||.=|+.+. +......-+...|++||+.
T Consensus 250 lilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~ 311 (313)
T KOG1455|consen 250 LILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDE 311 (313)
T ss_pred EEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHh
Confidence 99999 77776665443 223445678899999999888775 3334445677899999975
No 15
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.75 E-value=3.1e-17 Score=189.52 Aligned_cols=266 Identities=11% Similarity=0.054 Sum_probs=145.5
Q ss_pred cCCcceEEEEEEcCC--CcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCC
Q 000272 181 EGKLEYQRVCVNTED--GGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGG 258 (1744)
Q Consensus 181 ~p~V~YeRe~L~t~D--GG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGg 258 (1744)
.+.+++...++++.+ |+.+.+.+... ..+.+|+||++||++ ++. ..|..++..|.++||+|+++|+||||.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~i~y~~~-----G~~~~~~lvliHG~~-~~~-~~w~~~~~~L~~~gy~vi~~Dl~G~G~ 86 (302)
T PRK00870 14 LPDYPFAPHYVDVDDGDGGPLRMHYVDE-----GPADGPPVLLLHGEP-SWS-YLYRKMIPILAAAGHRVIAPDLIGFGR 86 (302)
T ss_pred CcCCCCCceeEeecCCCCceEEEEEEec-----CCCCCCEEEEECCCC-Cch-hhHHHHHHHHHhCCCEEEEECCCCCCC
Confidence 566777777777765 45444333321 112357999999984 333 345678888888899999999999999
Q ss_pred CCCCCC-CCCCc-CcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhh--hcc
Q 000272 259 SPLTTS-RLFTA-ADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEA--TRS 334 (1744)
Q Consensus 259 Spltsp-rly~a-g~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es--~~s 334 (1744)
|..... ..|+. ...+|+.++++++ +..+++++||||||.+++.++.++++ .+.+++++++..-.... ...
T Consensus 87 S~~~~~~~~~~~~~~a~~l~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~ 160 (302)
T PRK00870 87 SDKPTRREDYTYARHVEWMRSWFEQL----DLTDVTLVCQDWGGLIGLRLAAEHPD--RFARLVVANTGLPTGDGPMPDA 160 (302)
T ss_pred CCCCCCcccCCHHHHHHHHHHHHHHc----CCCCEEEEEEChHHHHHHHHHHhChh--heeEEEEeCCCCCCccccchHH
Confidence 854321 22322 2346666666554 34689999999999999999998875 58888888764311110 000
Q ss_pred CchhHHhHHHHH-HHHHHHHHhhhhhhhccCCCcCHHHHhhh----------hcHHHHHHHHhhhccchhhHHHHHhhcC
Q 000272 335 SPHHIALDEKLA-NGLIDILRSNKELFKGRAKGFDVEKALSA----------KSVRDFEKAISMVSYGFEAIEDFYSKSS 403 (1744)
Q Consensus 335 lp~~~ly~~~L~-~~Lk~~L~r~~~lf~~~~~~~Did~vlka----------rTirEFDd~~tap~~Gf~sv~eYY~~aS 403 (1744)
......+..... ..+...+... + ......+..... ...+.+.. +. ..+.... .+.....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~-~~~~~~~ 230 (302)
T PRK00870 161 FWAWRAFSQYSPVLPVGRLVNGG---T---VRDLSDAVRAAYDAPFPDESYKAGARAFPL-LV--PTSPDDP-AVAANRA 230 (302)
T ss_pred HhhhhcccccCchhhHHHHhhcc---c---cccCCHHHHHHhhcccCChhhhcchhhhhh-cC--CCCCCCc-chHHHHH
Confidence 000000000000 0000000000 0 000000000000 00000000 00 0000000 0000000
Q ss_pred cchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeE---EEEecCCCccccCCCCchhHHHHHHHHHHHHH
Q 000272 404 TRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTS---LLLCSCLPSSVIGGGRAAESWCQNLVIEWLSA 474 (1744)
Q Consensus 404 ~~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la~~nPnv~---LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~a 474 (1744)
....+.+|++|+|+|+| +|+++|... .......|+.. ++++++++|..+.+. ...+.+.+.+||+.
T Consensus 231 ~~~~l~~i~~P~lii~G~~D~~~~~~~--~~~~~~~~~~~~~~~~~i~~~gH~~~~e~---p~~~~~~l~~fl~~ 300 (302)
T PRK00870 231 AWAVLERWDKPFLTAFSDSDPITGGGD--AILQKRIPGAAGQPHPTIKGAGHFLQEDS---GEELAEAVLEFIRA 300 (302)
T ss_pred HHHhhhcCCCceEEEecCCCCcccCch--HHHHhhcccccccceeeecCCCccchhhC---hHHHHHHHHHHHhc
Confidence 12457899999999999 999998754 34556677765 788998888776653 34577889999864
No 16
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.75 E-value=8.1e-17 Score=182.25 Aligned_cols=235 Identities=14% Similarity=0.073 Sum_probs=133.7
Q ss_pred CCcEEEEEcCCCCCchhHH--HHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC-CCCcCcHHHHHHHHHHHHhhCCCCcE
Q 000272 215 LDTTLLLVPGTAEGSIEKR--IRLFVCEALRRGFFPVVMNPRGCGGSPLTTSR-LFTAADSDDICTAIQFIGKARPWTTL 291 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sY--Ir~La~~La~~GYrVVVfD~RGhGgSpltspr-ly~ag~tdDL~aaId~LrkryP~spI 291 (1744)
.+|+||+|||+. ++...| +...+..+.+.||+|+++|+||||.|+..... .......+|+.++++++ ...++
T Consensus 29 ~~~~ivllHG~~-~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~ 103 (282)
T TIGR03343 29 NGEAVIMLHGGG-PGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL----DIEKA 103 (282)
T ss_pred CCCeEEEECCCC-CchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHc----CCCCe
Confidence 357899999984 333322 22334567778999999999999999643211 11223467777777776 34689
Q ss_pred EEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchh--HHhHHHH----HHHHHHHHHhhhhhhhccCC
Q 000272 292 MSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHH--IALDEKL----ANGLIDILRSNKELFKGRAK 365 (1744)
Q Consensus 292 vLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~--~ly~~~L----~~~Lk~~L~r~~~lf~~~~~ 365 (1744)
+++||||||.+++.|++++++ .++++|+++++..........+.. ..+...+ ...+...+... .+.. .
T Consensus 104 ~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~ 177 (282)
T TIGR03343 104 HLVGNSMGGATALNFALEYPD--RIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVF--LFDQ--S 177 (282)
T ss_pred eEEEECchHHHHHHHHHhChH--hhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhC--ccCc--c
Confidence 999999999999999998875 588999988653211100000000 0000000 00011111000 0000 0
Q ss_pred CcCHHHHhhhhcHHHHHHHHhhhccchhhHHHHH--------hhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHh
Q 000272 366 GFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFY--------SKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIA 436 (1744)
Q Consensus 366 ~~Did~vlkarTirEFDd~~tap~~Gf~sv~eYY--------~~aS~~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la~ 436 (1744)
..+.. ... .....+ ...+ .....+. ........+.+|++|+|+|+| +|+++|+.... ....
T Consensus 178 ~~~~~-~~~-~~~~~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~-~~~~ 247 (282)
T TIGR03343 178 LITEE-LLQ-GRWENI---QRQP----EHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGL-KLLW 247 (282)
T ss_pred cCcHH-HHH-hHHHHh---hcCH----HHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHH-HHHH
Confidence 00000 000 000000 0000 0000110 111123457899999999999 99999876543 4456
Q ss_pred cCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHH
Q 000272 437 ENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLS 473 (1744)
Q Consensus 437 ~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~ 473 (1744)
..|++++++++++||....+. +..+.+.+.+||+
T Consensus 248 ~~~~~~~~~i~~agH~~~~e~---p~~~~~~i~~fl~ 281 (282)
T TIGR03343 248 NMPDAQLHVFSRCGHWAQWEH---ADAFNRLVIDFLR 281 (282)
T ss_pred hCCCCEEEEeCCCCcCCcccC---HHHHHHHHHHHhh
Confidence 789999999998888776653 4457788999985
No 17
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.74 E-value=4.9e-17 Score=192.43 Aligned_cols=268 Identities=12% Similarity=0.138 Sum_probs=152.0
Q ss_pred EEcCCCcEEEEE-ecCCCccccccCCCcEEEEEcCCCCCchhHHH------------------------HHHHHHHHhCC
Q 000272 191 VNTEDGGVISLD-WPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRI------------------------RLFVCEALRRG 245 (1744)
Q Consensus 191 L~t~DGG~IaLD-W~~p~~~~~~~g~~P~VVLLHGltGGS~~sYI------------------------r~La~~La~~G 245 (1744)
+...||..+.+. |... ..+.+|+++||+++++...|+ ..++..|.++|
T Consensus 2 ~~~~~g~~l~~~~~~~~-------~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G 74 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK-------NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNG 74 (332)
T ss_pred ccCCCCCeEEEeeeecc-------CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCC
Confidence 455688887664 5421 235799999999776643444 35789999999
Q ss_pred cEEEEEcCCCCCCCCCCCC-CCC--Cc-CcHHHHHHHHHHHHh-------------------hCC-CCcEEEEEecHHHH
Q 000272 246 FFPVVMNPRGCGGSPLTTS-RLF--TA-ADSDDICTAIQFIGK-------------------ARP-WTTLMSVGWGYGAN 301 (1744)
Q Consensus 246 YrVVVfD~RGhGgSpltsp-rly--~a-g~tdDL~aaId~Lrk-------------------ryP-~spIvLVGhSMGG~ 301 (1744)
|+|+++|+||||+|..... +.+ .+ ...+|+..+++.+++ .+| ..|++++||||||+
T Consensus 75 ~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~ 154 (332)
T TIGR01607 75 YSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGN 154 (332)
T ss_pred CcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccH
Confidence 9999999999999864322 222 11 224788888888765 466 67999999999999
Q ss_pred HHHHHHHHhCCC------CCceEEEEecCCCChhhhhcc--CchhHHhHHHHHHHHHHHHHhhhhhhhccCCCcCHHHHh
Q 000272 302 MLTKYLAEVGER------TPLTAVTCIDNPFDLEEATRS--SPHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKAL 373 (1744)
Q Consensus 302 IaL~YLae~ge~------s~L~AaVlISpP~Dl~es~~s--lp~~~ly~~~L~~~Lk~~L~r~~~lf~~~~~~~Did~vl 373 (1744)
+++.|+.+++.. ..+.|+|++++++.+...... ...... ...+...+..+..+.. +.. ...+..+..
T Consensus 155 i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~-~~~l~~~~~~~~p~~~--~~~-~~~~~~~~~- 229 (332)
T TIGR01607 155 IALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYF-YLPVMNFMSRVFPTFR--ISK-KIRYEKSPY- 229 (332)
T ss_pred HHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhh-HHHHHHHHHHHCCccc--ccC-ccccccChh-
Confidence 999999776532 258899999998865321100 000011 0111111111110000 000 000110000
Q ss_pred hhhcHHHHHHHHhhhccchhhHHHHHhhcC-cchhcCcC--CccEEEEEe-CCCCCCCCChHHHH-HhcCCCeEEEEecC
Q 000272 374 SAKSVRDFEKAISMVSYGFEAIEDFYSKSS-TRSVVGNI--KIPVLFIQN-DAGAVPPFSIPRSS-IAENPFTSLLLCSC 448 (1744)
Q Consensus 374 karTirEFDd~~tap~~Gf~sv~eYY~~aS-~~~~L~~I--kVPVLIIhG-DDp~VP~~aip~~l-a~~nPnv~LvLt~g 448 (1744)
.......|.........+....+++.... ....+..+ ++|+|+|+| +|+++++....... ....++..+.++++
T Consensus 230 -~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g 308 (332)
T TIGR01607 230 -VNDIIKFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLED 308 (332)
T ss_pred -hhhHHhcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECC
Confidence 00011111111000001112222222211 12235556 799999999 99999876443221 22347889999999
Q ss_pred CCccccCCCCchhHHHHHHHHHHHH
Q 000272 449 LPSSVIGGGRAAESWCQNLVIEWLS 473 (1744)
Q Consensus 449 GHH~gF~e~~~~~sWv~r~VlEFL~ 473 (1744)
++|..+.+.. ..-+...+.+||.
T Consensus 309 ~~H~i~~E~~--~~~v~~~i~~wL~ 331 (332)
T TIGR01607 309 MDHVITIEPG--NEEVLKKIIEWIS 331 (332)
T ss_pred CCCCCccCCC--HHHHHHHHHHHhh
Confidence 9898887632 2335678888874
No 18
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.73 E-value=1.6e-16 Score=168.58 Aligned_cols=210 Identities=17% Similarity=0.218 Sum_probs=122.4
Q ss_pred EEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-CCCC-cCcHHHHHHHHHHHHhhCCCCcEEEEEe
Q 000272 219 LLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTS-RLFT-AADSDDICTAIQFIGKARPWTTLMSVGW 296 (1744)
Q Consensus 219 VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsp-rly~-ag~tdDL~aaId~LrkryP~spIvLVGh 296 (1744)
||++||+++ +. .++..++..+ ++||+|+++|+||||.|..... ..+. ..+.+|+.++++.+ ...+++++||
T Consensus 1 vv~~hG~~~-~~-~~~~~~~~~l-~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~lvG~ 73 (228)
T PF12697_consen 1 VVFLHGFGG-SS-ESWDPLAEAL-ARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDAL----GIKKVILVGH 73 (228)
T ss_dssp EEEE-STTT-TG-GGGHHHHHHH-HTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHT----TTSSEEEEEE
T ss_pred eEEECCCCC-CH-HHHHHHHHHH-hCCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccc----cccccccccc
Confidence 799999843 44 4455678877 5899999999999999975432 1111 12345555555544 3368999999
Q ss_pred cHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHhHHHHH---HHHHHHHHhhhhhhhccCCCcCHHHHh
Q 000272 297 GYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLA---NGLIDILRSNKELFKGRAKGFDVEKAL 373 (1744)
Q Consensus 297 SMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly~~~L~---~~Lk~~L~r~~~lf~~~~~~~Did~vl 373 (1744)
||||.+++.|+.++++ .+.++++++++..............++...+. ..+...... .+.
T Consensus 74 S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------------ 136 (228)
T PF12697_consen 74 SMGGMIALRLAARYPD--RVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASR---FFY------------ 136 (228)
T ss_dssp THHHHHHHHHHHHSGG--GEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH---HHH------------
T ss_pred cccccccccccccccc--ccccceeecccccccccccccccchhhhhhhhcccccccccccc---ccc------------
Confidence 9999999999999876 69999999988876543200000001111000 000000000 000
Q ss_pred hhhcHHHHHHHHhhhccchhhHHHHH----hhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecC
Q 000272 374 SAKSVRDFEKAISMVSYGFEAIEDFY----SKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSC 448 (1744)
Q Consensus 374 karTirEFDd~~tap~~Gf~sv~eYY----~~aS~~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la~~nPnv~LvLt~g 448 (1744)
......++.+.+... .....+++ ........+..+++|+++|+| +|.++|.... .......|++++.++++
T Consensus 137 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~ 212 (228)
T PF12697_consen 137 RWFDGDEPEDLIRSS---RRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESA-EELADKLPNAELVVIPG 212 (228)
T ss_dssp HHHTHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHH-HHHHHHSTTEEEEEETT
T ss_pred ccccccccccccccc---ccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHH-HHHHHHCCCCEEEEECC
Confidence 000001111111100 00111111 112234667888999999999 8988884433 34455689999999999
Q ss_pred CCccccCC
Q 000272 449 LPSSVIGG 456 (1744)
Q Consensus 449 GHH~gF~e 456 (1744)
++|+.+.+
T Consensus 213 ~gH~~~~~ 220 (228)
T PF12697_consen 213 AGHFLFLE 220 (228)
T ss_dssp SSSTHHHH
T ss_pred CCCccHHH
Confidence 88887765
No 19
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.73 E-value=1e-16 Score=173.22 Aligned_cols=231 Identities=15% Similarity=0.138 Sum_probs=127.6
Q ss_pred cEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEEEEe
Q 000272 217 TTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGW 296 (1744)
Q Consensus 217 P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIvLVGh 296 (1744)
|+||++||+ +++.. +++.++..+. .+|+|+++|+||||.|+.... + ++..+++.+.... ..+++++||
T Consensus 5 ~~iv~~HG~-~~~~~-~~~~~~~~l~-~~~~vi~~d~~G~G~s~~~~~--~------~~~~~~~~~~~~~-~~~~~lvG~ 72 (245)
T TIGR01738 5 VHLVLIHGW-GMNAE-VFRCLDEELS-AHFTLHLVDLPGHGRSRGFGP--L------SLADAAEAIAAQA-PDPAIWLGW 72 (245)
T ss_pred ceEEEEcCC-CCchh-hHHHHHHhhc-cCeEEEEecCCcCccCCCCCC--c------CHHHHHHHHHHhC-CCCeEEEEE
Confidence 789999997 44444 4567777665 579999999999999864321 1 2333333333333 258999999
Q ss_pred cHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhh--hccCchhHHhH---HHHHHHHHHHHHhhhhhhhccCCCcCHHH
Q 000272 297 GYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEA--TRSSPHHIALD---EKLANGLIDILRSNKELFKGRAKGFDVEK 371 (1744)
Q Consensus 297 SMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es--~~slp~~~ly~---~~L~~~Lk~~L~r~~~lf~~~~~~~Did~ 371 (1744)
||||.+++.++.++++ .+.++|++++....... .........+. ..+.......+........ .......
T Consensus 73 S~Gg~~a~~~a~~~p~--~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-- 147 (245)
T TIGR01738 73 SLGGLVALHIAATHPD--RVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQT-LGTPTAR-- 147 (245)
T ss_pred cHHHHHHHHHHHHCHH--hhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHH-hcCCccc--
Confidence 9999999999998775 47888877654322111 00000000010 0011111111111100000 0000000
Q ss_pred HhhhhcHHHHHHHHhhhc----cchhhHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEe
Q 000272 372 ALSAKSVRDFEKAISMVS----YGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLC 446 (1744)
Q Consensus 372 vlkarTirEFDd~~tap~----~Gf~sv~eYY~~aS~~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la~~nPnv~LvLt 446 (1744)
.....+...+.... ..+....+.+...+....+.+|++|+|+|+| +|+++|+.... ......|++++.++
T Consensus 148 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~-~~~~~~~~~~~~~~ 222 (245)
T TIGR01738 148 ----QDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVP-YLDKLAPHSELYIF 222 (245)
T ss_pred ----hHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHH-HHHHhCCCCeEEEe
Confidence 00111111111100 0111111122223334568899999999999 99999876443 34567899999999
Q ss_pred cCCCccccCCCCchhHHHHHHHHHHH
Q 000272 447 SCLPSSVIGGGRAAESWCQNLVIEWL 472 (1744)
Q Consensus 447 ~gGHH~gF~e~~~~~sWv~r~VlEFL 472 (1744)
+++||..+.+. ...+.+.+.+|+
T Consensus 223 ~~~gH~~~~e~---p~~~~~~i~~fi 245 (245)
T TIGR01738 223 AKAAHAPFLSH---AEAFCALLVAFK 245 (245)
T ss_pred CCCCCCccccC---HHHHHHHHHhhC
Confidence 98888777752 445678888874
No 20
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.73 E-value=2.8e-16 Score=179.24 Aligned_cols=254 Identities=13% Similarity=0.190 Sum_probs=145.0
Q ss_pred EEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCC
Q 000272 189 VCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFT 268 (1744)
Q Consensus 189 e~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ 268 (1744)
+++++ ||.++++.-... ....++|||+||++ ++.. .++.++..|. .+|+|+++|+||||.|+... ..+.
T Consensus 5 ~~~~~-~~~~~~~~~~~~------~~~~~plvllHG~~-~~~~-~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~-~~~~ 73 (276)
T TIGR02240 5 RTIDL-DGQSIRTAVRPG------KEGLTPLLIFNGIG-ANLE-LVFPFIEALD-PDLEVIAFDVPGVGGSSTPR-HPYR 73 (276)
T ss_pred EEecc-CCcEEEEEEecC------CCCCCcEEEEeCCC-cchH-HHHHHHHHhc-cCceEEEECCCCCCCCCCCC-CcCc
Confidence 44454 677777622111 11247899999974 3443 4556676664 47999999999999996432 2232
Q ss_pred -cCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHhHHHHHH
Q 000272 269 -AADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLAN 347 (1744)
Q Consensus 269 -ag~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly~~~L~~ 347 (1744)
....+|+.++++++. ..+++++||||||.+++.++.++++ .++++|+++++........ .+. ... .+..
T Consensus 74 ~~~~~~~~~~~i~~l~----~~~~~LvG~S~GG~va~~~a~~~p~--~v~~lvl~~~~~~~~~~~~-~~~-~~~--~~~~ 143 (276)
T TIGR02240 74 FPGLAKLAARMLDYLD----YGQVNAIGVSWGGALAQQFAHDYPE--RCKKLILAATAAGAVMVPG-KPK-VLM--MMAS 143 (276)
T ss_pred HHHHHHHHHHHHHHhC----cCceEEEEECHHHHHHHHHHHHCHH--HhhheEEeccCCccccCCC-chh-HHH--HhcC
Confidence 234577777777763 3579999999999999999999876 6999999987654321000 000 000 0000
Q ss_pred HHHHHHHh------hhhhhhccCCCcCHHHHhhhhcHHHHHHHH-hhhccchhhHHHHHh--hcCcchhcCcCCccEEEE
Q 000272 348 GLIDILRS------NKELFKGRAKGFDVEKALSAKSVRDFEKAI-SMVSYGFEAIEDFYS--KSSTRSVVGNIKIPVLFI 418 (1744)
Q Consensus 348 ~Lk~~L~r------~~~lf~~~~~~~Did~vlkarTirEFDd~~-tap~~Gf~sv~eYY~--~aS~~~~L~~IkVPVLII 418 (1744)
....+.. ....+.... ..+.+.+ ..+.... .....++ ...++. .......+.+|++|+|+|
T Consensus 144 -~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~i~~P~lii 213 (276)
T TIGR02240 144 -PRRYIQPSHGIHIAPDIYGGAF-RRDPELA------MAHASKVRSGGKLGY--YWQLFAGLGWTSIHWLHKIQQPTLVL 213 (276)
T ss_pred -chhhhccccccchhhhhcccee-eccchhh------hhhhhhcccCCCchH--HHHHHHHcCCchhhHhhcCCCCEEEE
Confidence 0000000 000000000 0000000 0000000 0000011 011111 112235588999999999
Q ss_pred Ee-CCCCCCCCChHHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHHHhh
Q 000272 419 QN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVELG 478 (1744)
Q Consensus 419 hG-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~~~ 478 (1744)
+| +|+++|+.... .+....|+++++++++ +|..+.+. +..+.+.+.+|+++....
T Consensus 214 ~G~~D~~v~~~~~~-~l~~~~~~~~~~~i~~-gH~~~~e~---p~~~~~~i~~fl~~~~~~ 269 (276)
T TIGR02240 214 AGDDDPIIPLINMR-LLAWRIPNAELHIIDD-GHLFLITR---AEAVAPIIMKFLAEERQR 269 (276)
T ss_pred EeCCCCcCCHHHHH-HHHHhCCCCEEEEEcC-CCchhhcc---HHHHHHHHHHHHHHhhhh
Confidence 99 99999886543 3456789999999987 56555542 345789999999987765
No 21
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.73 E-value=7.3e-17 Score=174.51 Aligned_cols=236 Identities=12% Similarity=0.117 Sum_probs=132.2
Q ss_pred CCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEEE
Q 000272 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSV 294 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIvLV 294 (1744)
.+|+||++||+ +++.. .++.++..+ ..||+|+++|+||||.|+............+|+.++++.+ +..+++++
T Consensus 12 ~~~~li~~hg~-~~~~~-~~~~~~~~l-~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~----~~~~v~li 84 (251)
T TIGR02427 12 GAPVLVFINSL-GTDLR-MWDPVLPAL-TPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHL----GIERAVFC 84 (251)
T ss_pred CCCeEEEEcCc-ccchh-hHHHHHHHh-hcccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCceEEE
Confidence 35889999997 44443 345666655 4789999999999999864322211122345555555544 44689999
Q ss_pred EecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHhHHHHHHHHHHHHHhh-hhhhhccCCCcCHHHHh
Q 000272 295 GWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSN-KELFKGRAKGFDVEKAL 373 (1744)
Q Consensus 295 GhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly~~~L~~~Lk~~L~r~-~~lf~~~~~~~Did~vl 373 (1744)
||||||.+++.++.+.++ .+.++++++++........ +...+.......+....... ...+.......+.
T Consensus 85 G~S~Gg~~a~~~a~~~p~--~v~~li~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 155 (251)
T TIGR02427 85 GLSLGGLIAQGLAARRPD--RVRALVLSNTAAKIGTPES---WNARIAAVRAEGLAALADAVLERWFTPGFREAHP---- 155 (251)
T ss_pred EeCchHHHHHHHHHHCHH--HhHHHhhccCccccCchhh---HHHHHhhhhhccHHHHHHHHHHHHcccccccCCh----
Confidence 999999999999988764 4777777765533211100 00000000000000000000 0001100000000
Q ss_pred hhhcHHHHHHHHh-hhccchhhHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCc
Q 000272 374 SAKSVRDFEKAIS-MVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPS 451 (1744)
Q Consensus 374 karTirEFDd~~t-ap~~Gf~sv~eYY~~aS~~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH 451 (1744)
.....+.+.+. ....+|.....++........+.++++|+|+|+| +|+++|..... ......++.+++++++++|
T Consensus 156 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~gH 232 (251)
T TIGR02427 156 --ARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVR-EIADLVPGARFAEIRGAGH 232 (251)
T ss_pred --HHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHH-HHHHhCCCceEEEECCCCC
Confidence 00111111111 1112233233334444445668889999999999 99999876443 3456678889999998888
Q ss_pred cccCCCCchhHHHHHHHHHHH
Q 000272 452 SVIGGGRAAESWCQNLVIEWL 472 (1744)
Q Consensus 452 ~gF~e~~~~~sWv~r~VlEFL 472 (1744)
..+.+. ...+.+.+.+||
T Consensus 233 ~~~~~~---p~~~~~~i~~fl 250 (251)
T TIGR02427 233 IPCVEQ---PEAFNAALRDFL 250 (251)
T ss_pred cccccC---hHHHHHHHHHHh
Confidence 776652 334567888886
No 22
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.73 E-value=7.3e-16 Score=170.95 Aligned_cols=258 Identities=13% Similarity=0.147 Sum_probs=135.0
Q ss_pred CCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC--CCCcCc
Q 000272 194 EDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSR--LFTAAD 271 (1744)
Q Consensus 194 ~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltspr--ly~ag~ 271 (1744)
.||+.+.+....+ .+.+++||++||++++ ...|+..+...+.+.||+|+++|+||||.|...... .+.
T Consensus 9 ~~~~~~~~~~~~~------~~~~~~vl~~hG~~g~-~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~--- 78 (288)
T TIGR01250 9 VDGGYHLFTKTGG------EGEKIKLLLLHGGPGM-SHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWT--- 78 (288)
T ss_pred CCCCeEEEEeccC------CCCCCeEEEEcCCCCc-cHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCccccccc---
Confidence 4666666544432 1235789999997554 445666666666666999999999999998643211 122
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHhHHHHHHHHHH
Q 000272 272 SDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLID 351 (1744)
Q Consensus 272 tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly~~~L~~~Lk~ 351 (1744)
.+++.+.+..+.+.....+++++||||||.+++.++..+++ .+.+++++++........... .... ..+......
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~--~~~~-~~~~~~~~~ 153 (288)
T TIGR01250 79 IDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQ--HLKGLIISSMLDSAPEYVKEL--NRLR-KELPPEVRA 153 (288)
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCcc--ccceeeEecccccchHHHHHH--HHHH-hhcChhHHH
Confidence 33333333333334444679999999999999999999875 578888776543322111100 0000 000000000
Q ss_pred HHHhhhhhhhccCCCcCHHHHhh-------------hhcHHHHHHH----Hhhhccchhh--HHHHHhhcCcchhcCcCC
Q 000272 352 ILRSNKELFKGRAKGFDVEKALS-------------AKSVRDFEKA----ISMVSYGFEA--IEDFYSKSSTRSVVGNIK 412 (1744)
Q Consensus 352 ~L~r~~~lf~~~~~~~Did~vlk-------------arTirEFDd~----~tap~~Gf~s--v~eYY~~aS~~~~L~~Ik 412 (1744)
.+..... ... ....+...... ......+... +.....+... ....+........+.+|+
T Consensus 154 ~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 231 (288)
T TIGR01250 154 AIKRCEA-SGD-YDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIK 231 (288)
T ss_pred HHHHHHh-ccC-cchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccC
Confidence 0000000 000 00000000000 0000000000 0000000000 000111122335678899
Q ss_pred ccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHH
Q 000272 413 IPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLS 473 (1744)
Q Consensus 413 VPVLIIhG-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~ 473 (1744)
+|+|+++| +|.+ ++... .......+++++++++++||..+.+. +..+.+.+.+||+
T Consensus 232 ~P~lii~G~~D~~-~~~~~-~~~~~~~~~~~~~~~~~~gH~~~~e~---p~~~~~~i~~fl~ 288 (288)
T TIGR01250 232 VPTLLTVGEFDTM-TPEAA-REMQELIAGSRLVVFPDGSHMTMIED---PEVYFKLLSDFIR 288 (288)
T ss_pred CCEEEEecCCCcc-CHHHH-HHHHHhccCCeEEEeCCCCCCcccCC---HHHHHHHHHHHhC
Confidence 99999999 7764 44433 34456678899999998888777652 4457788888873
No 23
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.72 E-value=1.1e-15 Score=171.18 Aligned_cols=238 Identities=16% Similarity=0.126 Sum_probs=132.5
Q ss_pred CcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCc-CcHHHHHHHHHHHHhhCCCCcEEEE
Q 000272 216 DTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTA-ADSDDICTAIQFIGKARPWTTLMSV 294 (1744)
Q Consensus 216 ~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~a-g~tdDL~aaId~LrkryP~spIvLV 294 (1744)
+|+||++||+ +++... ++.++..+. ++|+|+++|+||||.|.......++. ...+|+.++++++ ...+++++
T Consensus 28 ~~~vv~~hG~-~~~~~~-~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~----~~~~~~lv 100 (278)
T TIGR03056 28 GPLLLLLHGT-GASTHS-WRDLMPPLA-RSFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAE----GLSPDGVI 100 (278)
T ss_pred CCeEEEEcCC-CCCHHH-HHHHHHHHh-hCcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHc----CCCCceEE
Confidence 5899999998 445444 455666665 47999999999999986443322322 2345666655543 34678999
Q ss_pred EecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccC--chh-HH-hHHHHHHHHHHHHHh----hhhhhhccCCC
Q 000272 295 GWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSS--PHH-IA-LDEKLANGLIDILRS----NKELFKGRAKG 366 (1744)
Q Consensus 295 GhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~sl--p~~-~l-y~~~L~~~Lk~~L~r----~~~lf~~~~~~ 366 (1744)
||||||++++.++..+++ .+.+++++++.+......... ++. .. ....+...+...... ....+......
T Consensus 101 G~S~Gg~~a~~~a~~~p~--~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (278)
T TIGR03056 101 GHSAGAAIALRLALDGPV--TPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQRVERLIRDTGSL 178 (278)
T ss_pred EECccHHHHHHHHHhCCc--ccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCcchhHHhhccccc
Confidence 999999999999988765 577888887765432211110 100 00 000000000000000 00000000000
Q ss_pred cCHHHHhhhhcHHHHHHHHhhhccchhhHHHHHhhc---CcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeE
Q 000272 367 FDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKS---STRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTS 442 (1744)
Q Consensus 367 ~Did~vlkarTirEFDd~~tap~~Gf~sv~eYY~~a---S~~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la~~nPnv~ 442 (1744)
.+ ....+.+...+... ..+....++.... .....+++|++|+|+|+| +|.++|+... .......|++.
T Consensus 179 ~~------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~-~~~~~~~~~~~ 250 (278)
T TIGR03056 179 LD------KAGMTYYGRLIRSP-AHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDES-KRAATRVPTAT 250 (278)
T ss_pred cc------cchhhHHHHhhcCc-hhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHH-HHHHHhccCCe
Confidence 00 00111111111110 0111111221111 123457889999999999 8999987643 34556789999
Q ss_pred EEEecCCCccccCCCCchhHHHHHHHHHHHH
Q 000272 443 LLLCSCLPSSVIGGGRAAESWCQNLVIEWLS 473 (1744)
Q Consensus 443 LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~ 473 (1744)
+.+++++||..+.+. ...+.+.|.+||+
T Consensus 251 ~~~~~~~gH~~~~e~---p~~~~~~i~~f~~ 278 (278)
T TIGR03056 251 LHVVPGGGHLVHEEQ---ADGVVGLILQAAE 278 (278)
T ss_pred EEEECCCCCcccccC---HHHHHHHHHHHhC
Confidence 999999889877752 3456788888873
No 24
>PRK06489 hypothetical protein; Provisional
Probab=99.70 E-value=1.3e-15 Score=181.62 Aligned_cols=241 Identities=15% Similarity=0.165 Sum_probs=129.6
Q ss_pred CcEEEEEcCCCCCchhHHH-HHHHHHH-------HhCCcEEEEEcCCCCCCCCCCCCC------CCCcCcHHHHH-HHHH
Q 000272 216 DTTLLLVPGTAEGSIEKRI-RLFVCEA-------LRRGFFPVVMNPRGCGGSPLTTSR------LFTAADSDDIC-TAIQ 280 (1744)
Q Consensus 216 ~P~VVLLHGltGGS~~sYI-r~La~~L-------a~~GYrVVVfD~RGhGgSpltspr------ly~ag~tdDL~-aaId 280 (1744)
+|+||++||+++ +...|. ..+...+ ...+|+|+++|+||||.|...... .|+ .+|+. .++.
T Consensus 69 gpplvllHG~~~-~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~---~~~~a~~~~~ 144 (360)
T PRK06489 69 DNAVLVLHGTGG-SGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYD---YDDMVEAQYR 144 (360)
T ss_pred CCeEEEeCCCCC-chhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCccc---HHHHHHHHHH
Confidence 688999999854 443332 2343333 257899999999999998643221 122 23443 2333
Q ss_pred HHHhhCCCCcEE-EEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHhHHHHH-------------
Q 000272 281 FIGKARPWTTLM-SVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLA------------- 346 (1744)
Q Consensus 281 ~LrkryP~spIv-LVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly~~~L~------------- 346 (1744)
.+.++.+..++. ++||||||++++.++.++|+ .+.++|++++........ ...........+.
T Consensus 145 ~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~--~V~~LVLi~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (360)
T PRK06489 145 LVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPD--FMDALMPMASQPTEMSGR-NWMWRRMLIESIRNDPAWNNGNYTTQ 221 (360)
T ss_pred HHHHhcCCCceeEEEEECHHHHHHHHHHHhCch--hhheeeeeccCcccccHH-HHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 344444555774 89999999999999999886 588899886542110000 0000000000000
Q ss_pred -HHHHHHHHhhh-------hhhhccCCCcCHHHHhhhhcHHHHHHHHhhhccchhhHHHHH------hhcCcchhcCcCC
Q 000272 347 -NGLIDILRSNK-------ELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFY------SKSSTRSVVGNIK 412 (1744)
Q Consensus 347 -~~Lk~~L~r~~-------~lf~~~~~~~Did~vlkarTirEFDd~~tap~~Gf~sv~eYY------~~aS~~~~L~~Ik 412 (1744)
..+........ ..+... ..+... ....++..+..... .+...|. ...+....+.+|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~L~~I~ 292 (360)
T PRK06489 222 PPSLKRANPMFAIATSGGTLAYQAQ--APTRAA-----ADKLVDERLAAPVT--ADANDFLYQWDSSRDYNPSPDLEKIK 292 (360)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHh--cCChHH-----HHHHHHHHHHhhhh--cCHHHHHHHHHHhhccChHHHHHhCC
Confidence 00000000000 000000 000000 00011111110000 0111111 1123356789999
Q ss_pred ccEEEEEe-CCCCCCCCCh-HHHHHhcCCCeEEEEecCC----CccccCCCCchhHHHHHHHHHHHHHHH
Q 000272 413 IPVLFIQN-DAGAVPPFSI-PRSSIAENPFTSLLLCSCL----PSSVIGGGRAAESWCQNLVIEWLSAVE 476 (1744)
Q Consensus 413 VPVLIIhG-DDp~VP~~ai-p~~la~~nPnv~LvLt~gG----HH~gF~e~~~~~sWv~r~VlEFL~av~ 476 (1744)
+|+|+|+| +|.++|+... ........|+.++++++++ ||..+ + . +..+.+.|.+||..+.
T Consensus 293 ~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e--~-P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 293 APVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-G--S-AKFWKAYLAEFLAQVP 358 (360)
T ss_pred CCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-c--C-HHHHHHHHHHHHHhcc
Confidence 99999999 8988887643 2345678899999999974 77665 3 3 4457899999998764
No 25
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.70 E-value=1.3e-15 Score=175.96 Aligned_cols=264 Identities=13% Similarity=0.078 Sum_probs=139.2
Q ss_pred cceEEEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q 000272 184 LEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTT 263 (1744)
Q Consensus 184 V~YeRe~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSplts 263 (1744)
.+++...+++ +|..+.+... +.+|+||++||+. .+. ..++.++..+. ++|+|+++|+||||.|....
T Consensus 12 ~~~~~~~~~~-~~~~i~y~~~---------G~~~~iv~lHG~~-~~~-~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~ 78 (286)
T PRK03204 12 YPFESRWFDS-SRGRIHYIDE---------GTGPPILLCHGNP-TWS-FLYRDIIVALR-DRFRCVAPDYLGFGLSERPS 78 (286)
T ss_pred ccccceEEEc-CCcEEEEEEC---------CCCCEEEEECCCC-ccH-HHHHHHHHHHh-CCcEEEEECCCCCCCCCCCC
Confidence 3456667777 5666654322 2357899999974 232 22455665554 57999999999999986443
Q ss_pred CCCCCcCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHhHH
Q 000272 264 SRLFTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDE 343 (1744)
Q Consensus 264 prly~ag~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly~~ 343 (1744)
...| ..+|+...+..+.++.+..+++++||||||.+++.|+..+++ .++++|+++++.-.........+..++..
T Consensus 79 ~~~~---~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 153 (286)
T PRK03204 79 GFGY---QIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERAD--RVRGVVLGNTWFWPADTLAMKAFSRVMSS 153 (286)
T ss_pred cccc---CHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChh--heeEEEEECccccCCCchhHHHHHHHhcc
Confidence 2222 245666666665555566789999999999999999998875 68888887665311100000000000000
Q ss_pred -HHHHHHH--HHHHhhhhhhhccC-CCcCHHH---HhhhhcHHHHHHHHhhhccchhhHHHHHhhcCcchhcCc--CCcc
Q 000272 344 -KLANGLI--DILRSNKELFKGRA-KGFDVEK---ALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGN--IKIP 414 (1744)
Q Consensus 344 -~L~~~Lk--~~L~r~~~lf~~~~-~~~Did~---vlkarTirEFDd~~tap~~Gf~sv~eYY~~aS~~~~L~~--IkVP 414 (1744)
.....+. ..+. ..+++... ...+... ........+....+......+....++... ....+.. +++|
T Consensus 154 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P 229 (286)
T PRK03204 154 PPVQYAILRRNFFV--ERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLAR--LAREVPATLGTKP 229 (286)
T ss_pred ccchhhhhhhhHHH--HHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHH--hhhhhhhhcCCCC
Confidence 0000000 0000 00111000 0010000 000000000000000000001000000000 0011111 3899
Q ss_pred EEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHH
Q 000272 415 VLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWL 472 (1744)
Q Consensus 415 VLIIhG-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL 472 (1744)
+|+|+| +|.++++........+..|+.++++++++||..+.+. +.-+.+.+.+||
T Consensus 230 tliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~---Pe~~~~~i~~~~ 285 (286)
T PRK03204 230 TLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDA---PDRIAAAIIERF 285 (286)
T ss_pred eEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccC---HHHHHHHHHHhc
Confidence 999999 8888876544445567889999999999888877763 345678888887
No 26
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.70 E-value=1.1e-16 Score=176.28 Aligned_cols=225 Identities=16% Similarity=0.205 Sum_probs=148.7
Q ss_pred CcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEEEE
Q 000272 216 DTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVG 295 (1744)
Q Consensus 216 ~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIvLVG 295 (1744)
+..||+|||++|.+++ +|.++++|.++||.|.++++||||-.+-.--......|.+|+....+++.+. +...|.++|
T Consensus 15 ~~AVLllHGFTGt~~D--vr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~-gy~eI~v~G 91 (243)
T COG1647 15 NRAVLLLHGFTGTPRD--VRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA-GYDEIAVVG 91 (243)
T ss_pred CEEEEEEeccCCCcHH--HHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc-CCCeEEEEe
Confidence 3789999999876554 7899999999999999999999997652111122234789999999999843 346899999
Q ss_pred ecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHhHHHHHHHHHHHHHhhhhhhhccCCCcCHHHHhhh
Q 000272 296 WGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSA 375 (1744)
Q Consensus 296 hSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly~~~L~~~Lk~~L~r~~~lf~~~~~~~Did~vlka 375 (1744)
.||||.++++.+..+ +++++|.+|+|.+...... +..++..+.+.... +. ..|.+.+ .
T Consensus 92 lSmGGv~alkla~~~----p~K~iv~m~a~~~~k~~~~-----------iie~~l~y~~~~kk-~e----~k~~e~~--~ 149 (243)
T COG1647 92 LSMGGVFALKLAYHY----PPKKIVPMCAPVNVKSWRI-----------IIEGLLEYFRNAKK-YE----GKDQEQI--D 149 (243)
T ss_pred ecchhHHHHHHHhhC----CccceeeecCCcccccchh-----------hhHHHHHHHHHhhh-cc----CCCHHHH--H
Confidence 999999999999876 4899999999988653221 12222333322211 11 1121111 1
Q ss_pred hcHHHHHHHHhhhccchhhHHHHHhhc-CcchhcCcCCccEEEEEe-CCCCCCCCChHH-HHHhcCCCeEEEEecCCCcc
Q 000272 376 KSVRDFEKAISMVSYGFEAIEDFYSKS-STRSVVGNIKIPVLFIQN-DAGAVPPFSIPR-SSIAENPFTSLLLCSCLPSS 452 (1744)
Q Consensus 376 rTirEFDd~~tap~~Gf~sv~eYY~~a-S~~~~L~~IkVPVLIIhG-DDp~VP~~aip~-~la~~nPnv~LvLt~gGHH~ 452 (1744)
+.++.|.+.+.. ...+++.-. ...+.+..|.+|+++++| +|++||.++... ........-+|.++++.||.
T Consensus 150 ~e~~~~~~~~~~------~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHV 223 (243)
T COG1647 150 KEMKSYKDTPMT------TTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHV 223 (243)
T ss_pred HHHHHhhcchHH------HHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCce
Confidence 122223221111 122222211 234678899999999999 999999875543 22334556789999998886
Q ss_pred ccCCCCchhHHHHHHHHHHHH
Q 000272 453 VIGGGRAAESWCQNLVIEWLS 473 (1744)
Q Consensus 453 gF~e~~~~~sWv~r~VlEFL~ 473 (1744)
.-.. ..+.-+.+.|.+||+
T Consensus 224 It~D--~Erd~v~e~V~~FL~ 242 (243)
T COG1647 224 ITLD--KERDQVEEDVITFLE 242 (243)
T ss_pred eecc--hhHHHHHHHHHHHhh
Confidence 5554 334457899999986
No 27
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.70 E-value=3.4e-16 Score=168.50 Aligned_cols=235 Identities=14% Similarity=0.186 Sum_probs=129.3
Q ss_pred cEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHH-HHHHHhhCCCCcEEEEE
Q 000272 217 TTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTA-IQFIGKARPWTTLMSVG 295 (1744)
Q Consensus 217 P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aa-Id~LrkryP~spIvLVG 295 (1744)
|+||++||++ ++... ++.++..|. +||+|+++|+||||.|..... ......+++... +..+.++.+..+++++|
T Consensus 2 ~~vv~~hG~~-~~~~~-~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 76 (251)
T TIGR03695 2 PVLVFLHGFL-GSGAD-WQALIELLG-PHFRCLAIDLPGHGSSQSPDE--IERYDFEEAAQDILATLLDQLGIEPFFLVG 76 (251)
T ss_pred CEEEEEcCCC-Cchhh-HHHHHHHhc-ccCeEEEEcCCCCCCCCCCCc--cChhhHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 7899999984 44443 567777777 899999999999999864321 111223344433 56666666678999999
Q ss_pred ecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhcc---CchhHHhHHHHHH-HHHHHHHhhh--hhhhccCCCcCH
Q 000272 296 WGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRS---SPHHIALDEKLAN-GLIDILRSNK--ELFKGRAKGFDV 369 (1744)
Q Consensus 296 hSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~s---lp~~~ly~~~L~~-~Lk~~L~r~~--~lf~~~~~~~Di 369 (1744)
|||||.+++.|++.+++ .+.+++++++.......... ......+...+.. ....++.... ..+... ...+.
T Consensus 77 ~S~Gg~ia~~~a~~~~~--~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 153 (251)
T TIGR03695 77 YSMGGRIALYYALQYPE--RVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQ-KNLPP 153 (251)
T ss_pred eccHHHHHHHHHHhCch--heeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeec-ccCCh
Confidence 99999999999999875 58888888765443321110 0000000011110 0011111100 001000 00010
Q ss_pred HHHhhhhcHHHHHHHHhhhccchhhHHHHHh------hcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeE
Q 000272 370 EKALSAKSVRDFEKAISMVSYGFEAIEDFYS------KSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTS 442 (1744)
Q Consensus 370 d~vlkarTirEFDd~~tap~~Gf~sv~eYY~------~aS~~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la~~nPnv~ 442 (1744)
... ..+...... . .......++. .......+..|++|+|+|+| +|+.++. .........++++
T Consensus 154 ~~~------~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~--~~~~~~~~~~~~~ 223 (251)
T TIGR03695 154 EQR------QALRAKRLA-N-NPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFVQ--IAKEMQKLLPNLT 223 (251)
T ss_pred HHh------HHHHHhccc-c-cchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHHH--HHHHHHhcCCCCc
Confidence 000 000000000 0 0000111111 11223457889999999999 8876542 2233456778999
Q ss_pred EEEecCCCccccCCCCchhHHHHHHHHHHH
Q 000272 443 LLLCSCLPSSVIGGGRAAESWCQNLVIEWL 472 (1744)
Q Consensus 443 LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL 472 (1744)
+++++++||+.+.+. ..-+.+.+.+||
T Consensus 224 ~~~~~~~gH~~~~e~---~~~~~~~i~~~l 250 (251)
T TIGR03695 224 LVIIANAGHNIHLEN---PEAFAKILLAFL 250 (251)
T ss_pred EEEEcCCCCCcCccC---hHHHHHHHHHHh
Confidence 999998888777653 233567788887
No 28
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.70 E-value=9.7e-16 Score=167.92 Aligned_cols=237 Identities=16% Similarity=0.080 Sum_probs=130.7
Q ss_pred CCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCc-CcHHHHHHHHHHHHhhCCCCcEEE
Q 000272 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTA-ADSDDICTAIQFIGKARPWTTLMS 293 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~a-g~tdDL~aaId~LrkryP~spIvL 293 (1744)
..|+||++||+++ +. .++..++..+ .+||+|+++|+||||.|....+..++. .+.+|+.++++++ ...++++
T Consensus 12 ~~~~iv~lhG~~~-~~-~~~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~----~~~~~~l 84 (257)
T TIGR03611 12 DAPVVVLSSGLGG-SG-SYWAPQLDVL-TQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL----NIERFHF 84 (257)
T ss_pred CCCEEEEEcCCCc-ch-hHHHHHHHHH-HhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh----CCCcEEE
Confidence 4688999999853 43 3455566555 468999999999999997543333332 2345666666655 3367999
Q ss_pred EEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHhHHHHHHH-HHHHHHhhh-hhhhccCCCcCHHH
Q 000272 294 VGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANG-LIDILRSNK-ELFKGRAKGFDVEK 371 (1744)
Q Consensus 294 VGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly~~~L~~~-Lk~~L~r~~-~lf~~~~~~~Did~ 371 (1744)
+||||||.+++.+++.+++ .+.++|++++........... . ......+... ......... ..+.. ..
T Consensus 85 ~G~S~Gg~~a~~~a~~~~~--~v~~~i~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 153 (257)
T TIGR03611 85 VGHALGGLIGLQLALRYPE--RLLSLVLINAWSRPDPHTRRC-F-DVRIALLQHAGPEAYVHAQALFLYPA-------DW 153 (257)
T ss_pred EEechhHHHHHHHHHHChH--HhHHheeecCCCCCChhHHHH-H-HHHHHHHhccCcchhhhhhhhhhccc-------cH
Confidence 9999999999999998765 588888877543321111000 0 0000000000 000000000 00000 00
Q ss_pred Hhhhh-cHHHHHHHHhhhccchhh---HHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEe
Q 000272 372 ALSAK-SVRDFEKAISMVSYGFEA---IEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLC 446 (1744)
Q Consensus 372 vlkar-TirEFDd~~tap~~Gf~s---v~eYY~~aS~~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la~~nPnv~LvLt 446 (1744)
+.... .....+........+... ....+...+....+.+|++|+|+++| +|+++|+.... ......|++.+.++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~-~~~~~~~~~~~~~~ 232 (257)
T TIGR03611 154 ISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSL-RLAAALPNAQLKLL 232 (257)
T ss_pred hhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHH-HHHHhcCCceEEEE
Confidence 00000 000000000000000000 01112223344668899999999999 89999876543 34566789999999
Q ss_pred cCCCccccCCCCchhHHHHHHHHHHHH
Q 000272 447 SCLPSSVIGGGRAAESWCQNLVIEWLS 473 (1744)
Q Consensus 447 ~gGHH~gF~e~~~~~sWv~r~VlEFL~ 473 (1744)
+++||..+.+ .+..+.+.+.+||+
T Consensus 233 ~~~gH~~~~~---~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 233 PYGGHASNVT---DPETFNRALLDFLK 256 (257)
T ss_pred CCCCCCcccc---CHHHHHHHHHHHhc
Confidence 9877765554 24456788888885
No 29
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.69 E-value=9.7e-16 Score=172.22 Aligned_cols=232 Identities=13% Similarity=0.117 Sum_probs=130.1
Q ss_pred cEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEEEEe
Q 000272 217 TTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGW 296 (1744)
Q Consensus 217 P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIvLVGh 296 (1744)
|+||++||+ +++.. .|+.++..|.+ .|+|+++|+||||.|... ..+ ..+++...+. .. ...+++++||
T Consensus 14 ~~ivllHG~-~~~~~-~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~--~~~---~~~~~~~~l~---~~-~~~~~~lvGh 81 (256)
T PRK10349 14 VHLVLLHGW-GLNAE-VWRCIDEELSS-HFTLHLVDLPGFGRSRGF--GAL---SLADMAEAVL---QQ-APDKAIWLGW 81 (256)
T ss_pred CeEEEECCC-CCChh-HHHHHHHHHhc-CCEEEEecCCCCCCCCCC--CCC---CHHHHHHHHH---hc-CCCCeEEEEE
Confidence 579999997 44443 45677777764 599999999999998632 222 2334333333 22 2368999999
Q ss_pred cHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCch-h-HH---hHHHHHHHHHHHHHhhhhhhhccCCCcCHHH
Q 000272 297 GYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPH-H-IA---LDEKLANGLIDILRSNKELFKGRAKGFDVEK 371 (1744)
Q Consensus 297 SMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~-~-~l---y~~~L~~~Lk~~L~r~~~lf~~~~~~~Did~ 371 (1744)
||||.+++.++.++++ .+.++++++++...... ..++. . .. +...+.......+........ .... ..
T Consensus 82 S~Gg~ia~~~a~~~p~--~v~~lili~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~-- 154 (256)
T PRK10349 82 SLGGLVASQIALTHPE--RVQALVTVASSPCFSAR-DEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQT-MGTE-TA-- 154 (256)
T ss_pred CHHHHHHHHHHHhChH--hhheEEEecCccceecC-CCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHH-ccCc-hH--
Confidence 9999999999988765 68888888653222110 00110 0 00 000011101111111000000 0000 00
Q ss_pred HhhhhcHHHHHHHHhh-hccch---hhHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEe
Q 000272 372 ALSAKSVRDFEKAISM-VSYGF---EAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLC 446 (1744)
Q Consensus 372 vlkarTirEFDd~~ta-p~~Gf---~sv~eYY~~aS~~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la~~nPnv~LvLt 446 (1744)
....+++...+.. +.... ....+++...+....+.+|++|+|+|+| +|.++|.... .......|+++++++
T Consensus 155 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~-~~~~~~i~~~~~~~i 230 (256)
T PRK10349 155 ---RQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVV-PMLDKLWPHSESYIF 230 (256)
T ss_pred ---HHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHH-HHHHHhCCCCeEEEe
Confidence 0001111111111 10001 1112233344556778999999999999 8998886543 345567899999999
Q ss_pred cCCCccccCCCCchhHHHHHHHHHHHHH
Q 000272 447 SCLPSSVIGGGRAAESWCQNLVIEWLSA 474 (1744)
Q Consensus 447 ~gGHH~gF~e~~~~~sWv~r~VlEFL~a 474 (1744)
+++||..+.+ .+..+.+.+.+|-++
T Consensus 231 ~~~gH~~~~e---~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 231 AKAAHAPFIS---HPAEFCHLLVALKQR 255 (256)
T ss_pred CCCCCCcccc---CHHHHHHHHHHHhcc
Confidence 9888877775 244677888877543
No 30
>PLN02872 triacylglycerol lipase
Probab=99.69 E-value=3.6e-16 Score=189.30 Aligned_cols=289 Identities=16% Similarity=0.116 Sum_probs=166.7
Q ss_pred CcceEEEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHH-----HHHHHHHHHhCCcEEEEEcCCCCC
Q 000272 183 KLEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKR-----IRLFVCEALRRGFFPVVMNPRGCG 257 (1744)
Q Consensus 183 ~V~YeRe~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sY-----Ir~La~~La~~GYrVVVfD~RGhG 257 (1744)
..+.++..++++||..+.++|..+.........+|+|+++||+.. +...| .+.++..|+++||+|+++|+||++
T Consensus 41 gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~-ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~ 119 (395)
T PLN02872 41 GYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFM-AGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTR 119 (395)
T ss_pred CCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccc-cccceeecCcccchHHHHHhCCCCcccccccccc
Confidence 467789999999999999999853211111224689999999854 33433 245677788999999999999998
Q ss_pred CCCC------CCCCCCCcCc----HHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCC-CCceEEEEecCCC
Q 000272 258 GSPL------TTSRLFTAAD----SDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGER-TPLTAVTCIDNPF 326 (1744)
Q Consensus 258 gSpl------tsprly~ag~----tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~-s~L~AaVlISpP~ 326 (1744)
.+.. ..+.++.+.+ ..|+.++|+++.+..+ .++++|||||||.+++.++ .+++. ..+.++++++|..
T Consensus 120 ~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~-~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~ 197 (395)
T PLN02872 120 WSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITN-SKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPIS 197 (395)
T ss_pred cccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccC-CceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchh
Confidence 6522 1122222222 3699999999976544 6899999999999998666 34432 2466667766654
Q ss_pred ChhhhhccC----------------------chhHHhHHHHHHHHHHHHHhhh---hhhhccCCCcCHHHHh--------
Q 000272 327 DLEEATRSS----------------------PHHIALDEKLANGLIDILRSNK---ELFKGRAKGFDVEKAL-------- 373 (1744)
Q Consensus 327 Dl~es~~sl----------------------p~~~ly~~~L~~~Lk~~L~r~~---~lf~~~~~~~Did~vl-------- 373 (1744)
.+......+ +...++ ..+...++.....+. ..+.+....++...+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pa 276 (395)
T PLN02872 198 YLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVL-VKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEPH 276 (395)
T ss_pred hhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHH-HHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCCC
Confidence 332111000 000000 001111110000000 0111111112221111
Q ss_pred --hhhcHHHHHHHHhhhc---cch--hhHHHHHhhcC-cchhcCcC--CccEEEEEe-CCCCCCCCChHHHHHhcCCC-e
Q 000272 374 --SAKSVRDFEKAISMVS---YGF--EAIEDFYSKSS-TRSVVGNI--KIPVLFIQN-DAGAVPPFSIPRSSIAENPF-T 441 (1744)
Q Consensus 374 --karTirEFDd~~tap~---~Gf--~sv~eYY~~aS-~~~~L~~I--kVPVLIIhG-DDp~VP~~aip~~la~~nPn-v 441 (1744)
+.+.+..|-+.+.... |-| .....+|.... |...+.+| ++|+++++| +|.++++..... .....|+ +
T Consensus 277 gtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~-l~~~Lp~~~ 355 (395)
T PLN02872 277 PSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEH-TLAELPSKP 355 (395)
T ss_pred cchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHH-HHHHCCCcc
Confidence 1233444444443321 222 12233454444 44568888 589999999 999998765543 3445555 5
Q ss_pred EEEEecCCCccccCCCCchhHHHHHHHHHHHHHHH
Q 000272 442 SLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVE 476 (1744)
Q Consensus 442 ~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~ 476 (1744)
.+..+++.+|..|.-..+.+..+.+.|.+||++..
T Consensus 356 ~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~ 390 (395)
T PLN02872 356 ELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLG 390 (395)
T ss_pred EEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhh
Confidence 77788888887665334445557899999998543
No 31
>PLN02578 hydrolase
Probab=99.68 E-value=3.8e-15 Score=177.30 Aligned_cols=242 Identities=17% Similarity=0.177 Sum_probs=130.3
Q ss_pred CcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCc-CcHHHHHHHHHHHHhhCCCCcEEEE
Q 000272 216 DTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTA-ADSDDICTAIQFIGKARPWTTLMSV 294 (1744)
Q Consensus 216 ~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~a-g~tdDL~aaId~LrkryP~spIvLV 294 (1744)
+|+||++||+. ++. ..++..+..+. .+|+|+++|+||||.|..... .|.. .+.+|+.++++.+. ..+++++
T Consensus 86 g~~vvliHG~~-~~~-~~w~~~~~~l~-~~~~v~~~D~~G~G~S~~~~~-~~~~~~~a~~l~~~i~~~~----~~~~~lv 157 (354)
T PLN02578 86 GLPIVLIHGFG-ASA-FHWRYNIPELA-KKYKVYALDLLGFGWSDKALI-EYDAMVWRDQVADFVKEVV----KEPAVLV 157 (354)
T ss_pred CCeEEEECCCC-CCH-HHHHHHHHHHh-cCCEEEEECCCCCCCCCCccc-ccCHHHHHHHHHHHHHHhc----cCCeEEE
Confidence 57899999984 443 33555666665 579999999999999865422 2322 23466776666653 3689999
Q ss_pred EecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCc-----hhHHhHHHHHHHHHHHHHhhhh--h-hhccCCC
Q 000272 295 GWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSP-----HHIALDEKLANGLIDILRSNKE--L-FKGRAKG 366 (1744)
Q Consensus 295 GhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp-----~~~ly~~~L~~~Lk~~L~r~~~--l-f~~~~~~ 366 (1744)
||||||.+++.|+.++++ .+.++++++++........... ....+...+...+...+.+... . +... ..
T Consensus 158 G~S~Gg~ia~~~A~~~p~--~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 234 (354)
T PLN02578 158 GNSLGGFTALSTAVGYPE--LVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQAK-QP 234 (354)
T ss_pred EECHHHHHHHHHHHhChH--hcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhc-CH
Confidence 999999999999999876 5888888865432211100000 0000111011111110000000 0 0000 00
Q ss_pred cCHHHHh----h-hhcHHHH-HHHHhhhccchhhHHHHHh----------hcCcchhcCcCCccEEEEEe-CCCCCCCCC
Q 000272 367 FDVEKAL----S-AKSVRDF-EKAISMVSYGFEAIEDFYS----------KSSTRSVVGNIKIPVLFIQN-DAGAVPPFS 429 (1744)
Q Consensus 367 ~Did~vl----k-arTirEF-Dd~~tap~~Gf~sv~eYY~----------~aS~~~~L~~IkVPVLIIhG-DDp~VP~~a 429 (1744)
....... . ...+.++ .+.+..+.........||+ .....+.+.+|++|+|+|+| +|+++|...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~ 314 (354)
T PLN02578 235 SRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAK 314 (354)
T ss_pred HHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHH
Confidence 0000000 0 0000011 1111111111111111111 11234568899999999999 899888764
Q ss_pred hHHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHH
Q 000272 430 IPRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLS 473 (1744)
Q Consensus 430 ip~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~ 473 (1744)
.. ......|+..+++++ +||+.+.+ .+..+.+.|.+|+.
T Consensus 315 ~~-~l~~~~p~a~l~~i~-~GH~~~~e---~p~~~~~~I~~fl~ 353 (354)
T PLN02578 315 AE-KIKAFYPDTTLVNLQ-AGHCPHDE---VPEQVNKALLEWLS 353 (354)
T ss_pred HH-HHHHhCCCCEEEEeC-CCCCcccc---CHHHHHHHHHHHHh
Confidence 43 345667899988885 56666665 24467889999985
No 32
>PLN02965 Probable pheophorbidase
Probab=99.67 E-value=1.6e-15 Score=171.38 Aligned_cols=235 Identities=11% Similarity=0.086 Sum_probs=131.9
Q ss_pred EEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCc-CcHHHHHHHHHHHHhhCCCCcEEEEEe
Q 000272 218 TLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTA-ADSDDICTAIQFIGKARPWTTLMSVGW 296 (1744)
Q Consensus 218 ~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~a-g~tdDL~aaId~LrkryP~spIvLVGh 296 (1744)
.|||+||++ ++. ..|+.++..|.+.||+|+++|+||||.|+......|.. ...+|+.++++.+.. ..+++++||
T Consensus 5 ~vvllHG~~-~~~-~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~---~~~~~lvGh 79 (255)
T PLN02965 5 HFVFVHGAS-HGA-WCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPP---DHKVILVGH 79 (255)
T ss_pred EEEEECCCC-CCc-CcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCC---CCCEEEEec
Confidence 499999984 333 34567778887899999999999999996443323332 335677777776521 148999999
Q ss_pred cHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHhHHHHHHHHHHHHHhhhhhhhccC-CCc-----CHH
Q 000272 297 GYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRA-KGF-----DVE 370 (1744)
Q Consensus 297 SMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly~~~L~~~Lk~~L~r~~~lf~~~~-~~~-----Did 370 (1744)
||||.+++.|+.++|+ .|.++|++++........ . .... ...+..........+.... ... ..+
T Consensus 80 SmGG~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~-~--~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (255)
T PLN02965 80 SIGGGSVTEALCKFTD--KISMAIYVAAAMVKPGSI-I--SPRL-----KNVMEGTEKIWDYTFGEGPDKPPTGIMMKPE 149 (255)
T ss_pred CcchHHHHHHHHhCch--heeEEEEEccccCCCCCC-c--cHHH-----HhhhhccccceeeeeccCCCCCcchhhcCHH
Confidence 9999999999998876 588888887642110000 0 0000 0000000000000000000 000 000
Q ss_pred HH----hhhhcHHHHHH--HHhhhccchhhHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEE
Q 000272 371 KA----LSAKSVRDFEK--AISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSL 443 (1744)
Q Consensus 371 ~v----lkarTirEFDd--~~tap~~Gf~sv~eYY~~aS~~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la~~nPnv~L 443 (1744)
.. .......+... .... ...+.....+ ......+..|++|+|+|+| +|..+|+.. ...+.+..|++++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~i~vP~lvi~g~~D~~~~~~~-~~~~~~~~~~a~~ 224 (255)
T PLN02965 150 FVRHYYYNQSPLEDYTLSSKLLR-PAPVRAFQDL---DKLPPNPEAEKVPRVYIKTAKDNLFDPVR-QDVMVENWPPAQT 224 (255)
T ss_pred HHHHHHhcCCCHHHHHHHHHhcC-CCCCcchhhh---hhccchhhcCCCCEEEEEcCCCCCCCHHH-HHHHHHhCCcceE
Confidence 00 00000000000 0000 0001111111 0112245679999999999 999998753 3456678999999
Q ss_pred EEecCCCccccCCCCchhHHHHHHHHHHHHHH
Q 000272 444 LLCSCLPSSVIGGGRAAESWCQNLVIEWLSAV 475 (1744)
Q Consensus 444 vLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av 475 (1744)
++++++||+.+.+. +.-+.+.+.+|++.+
T Consensus 225 ~~i~~~GH~~~~e~---p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 225 YVLEDSDHSAFFSV---PTTLFQYLLQAVSSL 253 (255)
T ss_pred EEecCCCCchhhcC---HHHHHHHHHHHHHHh
Confidence 99998888877763 334678888887654
No 33
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.66 E-value=1.1e-14 Score=174.10 Aligned_cols=237 Identities=14% Similarity=0.168 Sum_probs=132.4
Q ss_pred CcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCc-CcHHHHHHHHHHHHhhCCCCcEEEE
Q 000272 216 DTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTA-ADSDDICTAIQFIGKARPWTTLMSV 294 (1744)
Q Consensus 216 ~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~a-g~tdDL~aaId~LrkryP~spIvLV 294 (1744)
+|+|||+||++ ++.. .|+.++..+. .+|+|+++|+||||.|.......|.. .+.+|+.++++.+ ...+++++
T Consensus 88 gp~lvllHG~~-~~~~-~w~~~~~~L~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l----~~~~~~lv 160 (360)
T PLN02679 88 GPPVLLVHGFG-ASIP-HWRRNIGVLA-KNYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV----VQKPTVLI 160 (360)
T ss_pred CCeEEEECCCC-CCHH-HHHHHHHHHh-cCCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh----cCCCeEEE
Confidence 48899999984 4443 3556666665 48999999999999996543223332 3446666666654 34689999
Q ss_pred EecHHHHHHHHHHHH-hCCCCCceEEEEecCCCChhhh--hcc------CchhHHhHH-----HHHHHHHH------HHH
Q 000272 295 GWGYGANMLTKYLAE-VGERTPLTAVTCIDNPFDLEEA--TRS------SPHHIALDE-----KLANGLID------ILR 354 (1744)
Q Consensus 295 GhSMGG~IaL~YLae-~ge~s~L~AaVlISpP~Dl~es--~~s------lp~~~ly~~-----~L~~~Lk~------~L~ 354 (1744)
||||||.+++.+++. +++ ++.++|+++++...... ... .+...++.. .+...+.. .++
T Consensus 161 GhS~Gg~ia~~~a~~~~P~--rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (360)
T PLN02679 161 GNSVGSLACVIAASESTRD--LVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLK 238 (360)
T ss_pred EECHHHHHHHHHHHhcChh--hcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHH
Confidence 999999999888875 454 68999998765322100 000 000000000 00000000 000
Q ss_pred hhh-hhhhccCCCcCHHHHhhhhcHHHHHHHHhhhcc---chhhHHHHHhh---cCcchhcCcCCccEEEEEe-CCCCCC
Q 000272 355 SNK-ELFKGRAKGFDVEKALSAKSVRDFEKAISMVSY---GFEAIEDFYSK---SSTRSVVGNIKIPVLFIQN-DAGAVP 426 (1744)
Q Consensus 355 r~~-~lf~~~~~~~Did~vlkarTirEFDd~~tap~~---Gf~sv~eYY~~---aS~~~~L~~IkVPVLIIhG-DDp~VP 426 (1744)
... ..+... ..++. ++.+.+..+.. .......++.. ......+.+|++|+|+|+| +|+++|
T Consensus 239 ~~~~~~~~~~-~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p 307 (360)
T PLN02679 239 NILLSVYGNK-EAVDD----------ELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTP 307 (360)
T ss_pred HHHHHhccCc-ccCCH----------HHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcC
Confidence 000 001000 00110 01011100000 01111111111 1223567899999999999 999998
Q ss_pred CCCh----HHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHH
Q 000272 427 PFSI----PRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAV 475 (1744)
Q Consensus 427 ~~ai----p~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av 475 (1744)
+... ...+.+..|++++++++++||..+.+. +..+.+.+.+||..+
T Consensus 308 ~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~---Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 308 LDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDR---PDLVHEKLLPWLAQL 357 (360)
T ss_pred chhhHHHHHHhhhccCCceEEEEcCCCCCCccccC---HHHHHHHHHHHHHhc
Confidence 7531 123445679999999998888766652 445788999999764
No 34
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.66 E-value=3.2e-15 Score=173.95 Aligned_cols=126 Identities=13% Similarity=0.152 Sum_probs=85.3
Q ss_pred EEEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCC
Q 000272 187 QRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRL 266 (1744)
Q Consensus 187 eRe~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprl 266 (1744)
...++...||..+.+.-..+ ..+++||++||+.++.... .+...+...+|+|+++|+||||.|.....
T Consensus 5 ~~~~~~~~~~~~l~y~~~g~-------~~~~~lvllHG~~~~~~~~---~~~~~~~~~~~~vi~~D~~G~G~S~~~~~-- 72 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSGN-------PDGKPVVFLHGGPGSGTDP---GCRRFFDPETYRIVLFDQRGCGKSTPHAC-- 72 (306)
T ss_pred cCCeEEcCCCcEEEEEECcC-------CCCCEEEEECCCCCCCCCH---HHHhccCccCCEEEEECCCCCCCCCCCCC--
Confidence 44578888998887633221 1246899999975443221 22334445789999999999999964321
Q ss_pred CCcCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCC
Q 000272 267 FTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPF 326 (1744)
Q Consensus 267 y~ag~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~ 326 (1744)
+.....+|+.+.+..+.++.+..+++++||||||.+++.|+.++++ .+.++|++++..
T Consensus 73 ~~~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~--~v~~lvl~~~~~ 130 (306)
T TIGR01249 73 LEENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPE--VVTGLVLRGIFL 130 (306)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChH--hhhhheeecccc
Confidence 1112334555555555555555789999999999999999999876 477888876543
No 35
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.66 E-value=1.1e-14 Score=177.52 Aligned_cols=243 Identities=16% Similarity=0.135 Sum_probs=146.1
Q ss_pred cceEEEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q 000272 184 LEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTT 263 (1744)
Q Consensus 184 V~YeRe~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSplts 263 (1744)
.++++..|+..||..+...++.|. ..+..|+||++||+ ++....+++.++..++++||+|+++|+||||.|....
T Consensus 166 ~~~e~v~i~~~~g~~l~g~l~~P~----~~~~~P~Vli~gG~-~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~ 240 (414)
T PRK05077 166 GELKELEFPIPGGGPITGFLHLPK----GDGPFPTVLVCGGL-DSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWK 240 (414)
T ss_pred CceEEEEEEcCCCcEEEEEEEECC----CCCCccEEEEeCCc-ccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC
Confidence 456778888888877765444442 12345677776665 4444456667888999999999999999999885321
Q ss_pred CCCCCcCcHHHHHHHHHHHHhhC--CCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHh
Q 000272 264 SRLFTAADSDDICTAIQFIGKAR--PWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIAL 341 (1744)
Q Consensus 264 prly~ag~tdDL~aaId~Lrkry--P~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly 341 (1744)
..........++++++..+. ...++.++||||||++++++++.+++ +++++|+++++++........ ...
T Consensus 241 ---~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~--ri~a~V~~~~~~~~~~~~~~~-~~~-- 312 (414)
T PRK05077 241 ---LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPP--RLKAVACLGPVVHTLLTDPKR-QQQ-- 312 (414)
T ss_pred ---ccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCc--CceEEEEECCccchhhcchhh-hhh--
Confidence 11112233457888887653 34689999999999999999987654 689999999887532111000 000
Q ss_pred HHHHHHHHHHHHHhhhhhhhccCCCcCHHHHhhhhcHHHHHHHHhhhccchhhHHHHHhhcCcchhc-CcCCccEEEEEe
Q 000272 342 DEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVV-GNIKIPVLFIQN 420 (1744)
Q Consensus 342 ~~~L~~~Lk~~L~r~~~lf~~~~~~~Did~vlkarTirEFDd~~tap~~Gf~sv~eYY~~aS~~~~L-~~IkVPVLIIhG 420 (1744)
+.......+... +. ....+.+.+ ...+. .+... ....+ .+|++|+|+|+|
T Consensus 313 ---~p~~~~~~la~~---lg--~~~~~~~~l---------~~~l~--~~sl~----------~~~~l~~~i~~PvLiI~G 363 (414)
T PRK05077 313 ---VPEMYLDVLASR---LG--MHDASDEAL---------RVELN--RYSLK----------VQGLLGRRCPTPMLSGYW 363 (414)
T ss_pred ---chHHHHHHHHHH---hC--CCCCChHHH---------HHHhh--hccch----------hhhhhccCCCCcEEEEec
Confidence 000000111100 00 001111111 11010 00000 00112 579999999999
Q ss_pred -CCCCCCCCChHHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHH
Q 000272 421 -DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAV 475 (1744)
Q Consensus 421 -DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av 475 (1744)
+|+++|+.... ......|+.+++++++.+| +.. ...+...+.+||...
T Consensus 364 ~~D~ivP~~~a~-~l~~~~~~~~l~~i~~~~~--~e~----~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 364 KNDPFSPEEDSR-LIASSSADGKLLEIPFKPV--YRN----FDKALQEISDWLEDR 412 (414)
T ss_pred CCCCCCCHHHHH-HHHHhCCCCeEEEccCCCc--cCC----HHHHHHHHHHHHHHH
Confidence 99999987554 3356678999999998643 221 334678899998754
No 36
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.66 E-value=3.6e-15 Score=166.15 Aligned_cols=231 Identities=13% Similarity=0.175 Sum_probs=132.6
Q ss_pred CCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEE
Q 000272 214 GLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMS 293 (1744)
Q Consensus 214 g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIvL 293 (1744)
..+|+||++||+++ +... +..++..+. .+|+|+++|+||||.|.... ........+|+.++++++ ...++++
T Consensus 14 ~~~~~iv~lhG~~~-~~~~-~~~~~~~l~-~~~~vi~~D~~G~G~s~~~~-~~~~~~~~~d~~~~l~~l----~~~~~~l 85 (255)
T PRK10673 14 HNNSPIVLVHGLFG-SLDN-LGVLARDLV-NDHDIIQVDMRNHGLSPRDP-VMNYPAMAQDLLDTLDAL----QIEKATF 85 (255)
T ss_pred CCCCCEEEECCCCC-chhH-HHHHHHHHh-hCCeEEEECCCCCCCCCCCC-CCCHHHHHHHHHHHHHHc----CCCceEE
Confidence 35689999999854 4443 445666654 57999999999999986432 222223467888888776 3357999
Q ss_pred EEecHHHHHHHHHHHHhCCCCCceEEEEecC-CCChhhhhccCchhHHhHHHHHHHHHH--HHH--hhhhhhhccCCCcC
Q 000272 294 VGWGYGANMLTKYLAEVGERTPLTAVTCIDN-PFDLEEATRSSPHHIALDEKLANGLID--ILR--SNKELFKGRAKGFD 368 (1744)
Q Consensus 294 VGhSMGG~IaL~YLae~ge~s~L~AaVlISp-P~Dl~es~~slp~~~ly~~~L~~~Lk~--~L~--r~~~lf~~~~~~~D 368 (1744)
+||||||.+++.++.++++ .+.++++++. |....... ....+. .+. .+.. ... .....+... +.
T Consensus 86 vGhS~Gg~va~~~a~~~~~--~v~~lvli~~~~~~~~~~~----~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~---~~ 154 (255)
T PRK10673 86 IGHSMGGKAVMALTALAPD--RIDKLVAIDIAPVDYHVRR----HDEIFA-AIN-AVSEAGATTRQQAAAIMRQH---LN 154 (255)
T ss_pred EEECHHHHHHHHHHHhCHh--hcceEEEEecCCCCccchh----hHHHHH-HHH-HhhhcccccHHHHHHHHHHh---cC
Confidence 9999999999999988765 5888888753 22211000 000000 000 0000 000 000000000 00
Q ss_pred HHHHhhhhcHHHHHH-HHhhh--ccchhhHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEE
Q 000272 369 VEKALSAKSVRDFEK-AISMV--SYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLL 444 (1744)
Q Consensus 369 id~vlkarTirEFDd-~~tap--~~Gf~sv~eYY~~aS~~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la~~nPnv~Lv 444 (1744)
...+..+.. .+... .++.....+.|........+..+++|+|+|+| +|++++.... ....+..|++.++
T Consensus 155 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~-~~~~~~~~~~~~~ 227 (255)
T PRK10673 155 ------EEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYR-DDLLAQFPQARAH 227 (255)
T ss_pred ------CHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHH-HHHHHhCCCcEEE
Confidence 000111100 00000 01111112223333334557789999999999 8998886543 3446778999999
Q ss_pred EecCCCccccCCCCchhHHHHHHHHHHHH
Q 000272 445 LCSCLPSSVIGGGRAAESWCQNLVIEWLS 473 (1744)
Q Consensus 445 Lt~gGHH~gF~e~~~~~sWv~r~VlEFL~ 473 (1744)
++++++|..+.+. +..+.+.+.+||.
T Consensus 228 ~~~~~gH~~~~~~---p~~~~~~l~~fl~ 253 (255)
T PRK10673 228 VIAGAGHWVHAEK---PDAVLRAIRRYLN 253 (255)
T ss_pred EeCCCCCeeeccC---HHHHHHHHHHHHh
Confidence 9998777655542 4457788888886
No 37
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.65 E-value=8.1e-15 Score=181.11 Aligned_cols=133 Identities=11% Similarity=0.136 Sum_probs=85.9
Q ss_pred cceEEEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHH---hCCcEEEEEcCCCCCCCC
Q 000272 184 LEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEAL---RRGFFPVVMNPRGCGGSP 260 (1744)
Q Consensus 184 V~YeRe~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La---~~GYrVVVfD~RGhGgSp 260 (1744)
..+...++.+++ ..+.+.-..+. ....+|+|||+||+. ++...|...+...+. +.||+|+++|+||||.|+
T Consensus 174 ~~~~~~~~~~~~-~~l~~~~~gp~----~~~~k~~VVLlHG~~-~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~ 247 (481)
T PLN03087 174 CKFCTSWLSSSN-ESLFVHVQQPK----DNKAKEDVLFIHGFI-SSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSP 247 (481)
T ss_pred cceeeeeEeeCC-eEEEEEEecCC----CCCCCCeEEEECCCC-ccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCc
Confidence 334445555544 45655433332 112347899999984 444433222333333 479999999999999997
Q ss_pred CCCCCCCCcCcHHHHHHHH-HHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCC
Q 000272 261 LTTSRLFTAADSDDICTAI-QFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFD 327 (1744)
Q Consensus 261 ltsprly~ag~tdDL~aaI-d~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~D 327 (1744)
......|. .+++.+.+ ..+..+.+..+++++||||||.+++.++.++|+ .+.++++++++..
T Consensus 248 ~p~~~~yt---l~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe--~V~~LVLi~~~~~ 310 (481)
T PLN03087 248 KPADSLYT---LREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPG--AVKSLTLLAPPYY 310 (481)
T ss_pred CCCCCcCC---HHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChH--hccEEEEECCCcc
Confidence 54333343 23333333 233344456789999999999999999999876 5899999987654
No 38
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.65 E-value=2.7e-15 Score=166.22 Aligned_cols=228 Identities=12% Similarity=0.100 Sum_probs=123.2
Q ss_pred CcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEEEE
Q 000272 216 DTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVG 295 (1744)
Q Consensus 216 ~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIvLVG 295 (1744)
+|+||++||++ ++... |+.++..+ .+|+|+++|+||||.|...... ......+|+.++++++ +..+++++|
T Consensus 2 ~p~vvllHG~~-~~~~~-w~~~~~~l--~~~~vi~~D~~G~G~S~~~~~~-~~~~~~~~l~~~l~~~----~~~~~~lvG 72 (242)
T PRK11126 2 LPWLVFLHGLL-GSGQD-WQPVGEAL--PDYPRLYIDLPGHGGSAAISVD-GFADVSRLLSQTLQSY----NILPYWLVG 72 (242)
T ss_pred CCEEEEECCCC-CChHH-HHHHHHHc--CCCCEEEecCCCCCCCCCcccc-CHHHHHHHHHHHHHHc----CCCCeEEEE
Confidence 47899999984 44444 45666666 4799999999999999643221 1112345555555543 457999999
Q ss_pred ecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhc---cCchhHHhHHHHHH-HHHHHHHhhhhhhhc-cCCCcCHH
Q 000272 296 WGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATR---SSPHHIALDEKLAN-GLIDILRSNKELFKG-RAKGFDVE 370 (1744)
Q Consensus 296 hSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~---slp~~~ly~~~L~~-~Lk~~L~r~~~lf~~-~~~~~Did 370 (1744)
|||||.+++.+++++++. .++++++++++........ .+.....+...+.. .+...+.. .+.. ....+..+
T Consensus 73 ~S~Gg~va~~~a~~~~~~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 148 (242)
T PRK11126 73 YSLGGRIAMYYACQGLAG-GLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLAD---WYQQPVFASLNAE 148 (242)
T ss_pred ECHHHHHHHHHHHhCCcc-cccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHH---HHhcchhhccCcc
Confidence 999999999999997542 4888888776543321110 00000000000000 00011110 0000 00000000
Q ss_pred HHhhhhcHHHHHHHHhhhccchhhHHHHHhh------cCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEE
Q 000272 371 KALSAKSVRDFEKAISMVSYGFEAIEDFYSK------SSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSL 443 (1744)
Q Consensus 371 ~vlkarTirEFDd~~tap~~Gf~sv~eYY~~------aS~~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la~~nPnv~L 443 (1744)
....+.... ....++ ....++.. ......+.+|++|+|+|+| +|+.+. ..+. .+++++
T Consensus 149 ------~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~------~~~~-~~~~~~ 213 (242)
T PRK11126 149 ------QRQQLVAKR-SNNNGA-AVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ------ALAQ-QLALPL 213 (242)
T ss_pred ------HHHHHHHhc-ccCCHH-HHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH------HHHH-HhcCeE
Confidence 000000000 000011 11222221 1223568899999999999 787442 1222 247899
Q ss_pred EEecCCCccccCCCCchhHHHHHHHHHHHHH
Q 000272 444 LLCSCLPSSVIGGGRAAESWCQNLVIEWLSA 474 (1744)
Q Consensus 444 vLt~gGHH~gF~e~~~~~sWv~r~VlEFL~a 474 (1744)
++++++||..+.+. +..+.+.|.+||..
T Consensus 214 ~~i~~~gH~~~~e~---p~~~~~~i~~fl~~ 241 (242)
T PRK11126 214 HVIPNAGHNAHREN---PAAFAASLAQILRL 241 (242)
T ss_pred EEeCCCCCchhhhC---hHHHHHHHHHHHhh
Confidence 99998777666652 45677888888863
No 39
>PRK07581 hypothetical protein; Validated
Probab=99.65 E-value=8.4e-15 Score=172.48 Aligned_cols=251 Identities=12% Similarity=0.096 Sum_probs=130.7
Q ss_pred CcEEEEEcCCCCCchhHHHHHHH---HHHHhCCcEEEEEcCCCCCCCCCCCC--CCCCcC------cHHHHHHHHHHHHh
Q 000272 216 DTTLLLVPGTAEGSIEKRIRLFV---CEALRRGFFPVVMNPRGCGGSPLTTS--RLFTAA------DSDDICTAIQFIGK 284 (1744)
Q Consensus 216 ~P~VVLLHGltGGS~~sYIr~La---~~La~~GYrVVVfD~RGhGgSpltsp--rly~ag------~tdDL~aaId~Lrk 284 (1744)
+|+||++||+ +++...+ ..++ ..+...+|+|+++|+||||.|..... ..|... ..+|+.+....+..
T Consensus 41 ~~~vll~~~~-~~~~~~~-~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 118 (339)
T PRK07581 41 DNAILYPTWY-SGTHQDN-EWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTE 118 (339)
T ss_pred CCEEEEeCCC-CCCcccc-hhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHH
Confidence 4667777775 4343332 2222 24555789999999999999864321 123322 24777775555554
Q ss_pred hCCCCc-EEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhcc------------Cchh-HHhH---HHHHH
Q 000272 285 ARPWTT-LMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRS------------SPHH-IALD---EKLAN 347 (1744)
Q Consensus 285 ryP~sp-IvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~s------------lp~~-~ly~---~~L~~ 347 (1744)
..+..+ .++|||||||++++.++.++|+ .+.++|++++.......... ..+. ..+. .....
T Consensus 119 ~lgi~~~~~lvG~S~GG~va~~~a~~~P~--~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 196 (339)
T PRK07581 119 KFGIERLALVVGWSMGAQQTYHWAVRYPD--MVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFNGGWYAEPPERGLR 196 (339)
T ss_pred HhCCCceEEEEEeCHHHHHHHHHHHHCHH--HHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHH
Confidence 455678 4799999999999999999986 58888888655432110000 0000 0000 00000
Q ss_pred HHHHHHHh---hhhhhhcc-CCCcCHHHHhhhhcHHH-HHHHHh-hhccchhhHHH-HH-----hh----cCcchhcCcC
Q 000272 348 GLIDILRS---NKELFKGR-AKGFDVEKALSAKSVRD-FEKAIS-MVSYGFEAIED-FY-----SK----SSTRSVVGNI 411 (1744)
Q Consensus 348 ~Lk~~L~r---~~~lf~~~-~~~~Did~vlkarTirE-FDd~~t-ap~~Gf~sv~e-YY-----~~----aS~~~~L~~I 411 (1744)
.+.+.... ....+... ......... ...+.. +...+. ....++...-. ++ .. ......+.+|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I 274 (339)
T PRK07581 197 AHARVYAGWGFSQAFYRQELWRAMGYASL--EDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSI 274 (339)
T ss_pred HHHHHHHHHHhHHHHHHhhhccccChhhH--HHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcC
Confidence 00000000 00000000 000000000 000000 000000 01111211111 11 11 1234568899
Q ss_pred CccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecC-CCccccCCCCchhHHHHHHHHHHHHHHH
Q 000272 412 KIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSC-LPSSVIGGGRAAESWCQNLVIEWLSAVE 476 (1744)
Q Consensus 412 kVPVLIIhG-DDp~VP~~aip~~la~~nPnv~LvLt~g-GHH~gF~e~~~~~sWv~r~VlEFL~av~ 476 (1744)
++|+|+|+| +|.++|+.... ...+..|+++++++++ +||..+.+. ...+.+.|.+||.++.
T Consensus 275 ~~PtLvI~G~~D~~~p~~~~~-~l~~~ip~a~l~~i~~~~GH~~~~~~---~~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 275 TAKTFVMPISTDLYFPPEDCE-AEAALIPNAELRPIESIWGHLAGFGQ---NPADIAFIDAALKELL 337 (339)
T ss_pred CCCEEEEEeCCCCCCCHHHHH-HHHHhCCCCeEEEeCCCCCccccccC---cHHHHHHHHHHHHHHH
Confidence 999999999 89999876543 4456789999999997 677666542 3345788888888764
No 40
>TIGR03008 pepcterm_CAAX CAAX prenyl protease-related protein. The CAAX prenyl protease, in eukaryotes, catalyzes three covalent modifications, including cleavage and acylation, at the C-terminus of certain proteins in a process connected to protein sorting. This family describes a bacterial protein family homologous to one domain of the CAAX-processing enzyme. Members of this protein family are found in genomes that carry a predicted protein sorting system, PEP-CTERM/exosortase, usually in the vicinity of the EpsH homolog that is the hallmark of the system. The function of this protein is unknown, but it may relate to protein motification.
Probab=99.63 E-value=1.7e-14 Score=162.09 Aligned_cols=134 Identities=19% Similarity=0.137 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCccccchhhHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 000272 1542 VQNFLKGLIAGVMLVLLIQSLNAVLGCVSFSWPSIVTSSLTAMAWLKVY-GNISMLACQGIVTATVVVLVEELLFRSWLP 1620 (1744)
Q Consensus 1542 ~r~ll~GLllGvlli~lv~li~~llG~i~~~~~~~~~s~~~~~~ll~~~-~~~~~lil~~lllallv~l~EELLFRG~L~ 1620 (1744)
.+..+.|++.|++++++.+...++..... .... +++..+.... .....+++..+..++++|++||++||||++
T Consensus 67 ~~~~l~gi~~Gv~~f~lwi~~~~~~~~~~-~~~~-----~~~~~i~~~~~~~~~l~~~~l~~~~l~vpi~EElfFRG~l~ 140 (222)
T TIGR03008 67 PRHLLFSAAVGVAVFVLWVNLDWLLPFQG-EPAG-----FDPSQIGNAGLTRWVLIAFRLAGATLVVPVMEELFWRSFLL 140 (222)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcC-Cccc-----cchhhhhcccchhhHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 57889999999998887776555543321 1111 1221111110 122222233455567789999999999999
Q ss_pred HHHHhh-c-------CCchhhHHHHHHHhHhcCCcchHHHHHHHHHHHHHHHHhcCCcchHHHHHHhHHhhhh
Q 000272 1621 EEIAAD-L-------DYHRGIIISGLAFALSQRSPQAIPGLWLLSLALAGVRQRSQGSLSVPIGLRTGIMASS 1685 (1744)
Q Consensus 1621 ~~L~~~-~-------g~~~AIIISSLLFALlHlsl~~~i~lfLlGLvLa~aylrttGSLWlpIGLHagWn~~~ 1685 (1744)
+.+.++ + ..|.|+++||++||+.|. .++..+++|++++++|.| |||||.||.+|+.||...
T Consensus 141 ~~l~~~~f~~~~~~~~~~~a~lisSllFal~H~---~~~~~~l~Gli~~~l~~~-tgsL~~~I~~H~~~N~ll 209 (222)
T TIGR03008 141 RYLQQSDFESVPGGRFHWPSFLAVTLLFGLEHH---LIVAGLIAGLAYNLLLLR-TGSIMACILAHAVTNGLL 209 (222)
T ss_pred HHHHHhcccccccccccHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHHHH
Confidence 999753 2 147899999999999996 466778899999999999 789999999999999753
No 41
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.62 E-value=1.8e-14 Score=165.99 Aligned_cols=236 Identities=17% Similarity=0.208 Sum_probs=134.6
Q ss_pred CcEEEEEcCCCCCch--hHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCC-CCcEE
Q 000272 216 DTTLLLVPGTAEGSI--EKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARP-WTTLM 292 (1744)
Q Consensus 216 ~P~VVLLHGltGGS~--~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP-~spIv 292 (1744)
.+.||++||+++... ...+..++..++++||+|+++|+||||.|+.... ....+.+|+.++++++++..+ ..+++
T Consensus 26 ~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~~--~~~~~~~d~~~~~~~l~~~~~g~~~i~ 103 (274)
T TIGR03100 26 TTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGENL--GFEGIDADIAAAIDAFREAAPHLRRIV 103 (274)
T ss_pred CCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC--CHHHHHHHHHHHHHHHHhhCCCCCcEE
Confidence 467888887643211 1224577889999999999999999999864321 112356899999999987764 46799
Q ss_pred EEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHhHHHHHHHHHHHHHhhhhhhhccCCCcCHHHH
Q 000272 293 SVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKA 372 (1744)
Q Consensus 293 LVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly~~~L~~~Lk~~L~r~~~lf~~~~~~~Did~v 372 (1744)
++||||||.+++.|+... ..++++|++++++........ ......+...+... .....++++ .++...+
T Consensus 104 l~G~S~Gg~~a~~~a~~~---~~v~~lil~~p~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~g---~~~~~~~ 172 (274)
T TIGR03100 104 AWGLCDAASAALLYAPAD---LRVAGLVLLNPWVRTEAAQAA----SRIRHYYLGQLLSA-DFWRKLLSG---EVNLGSS 172 (274)
T ss_pred EEEECHHHHHHHHHhhhC---CCccEEEEECCccCCcccchH----HHHHHHHHHHHhCh-HHHHHhcCC---CccHHHH
Confidence 999999999999987543 369999999877543221110 00111111111100 000111222 1232222
Q ss_pred hhhhcHHHHHHHHh-h-hccchhhHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCC-----hHH-HHHhcCCCeEE
Q 000272 373 LSAKSVRDFEKAIS-M-VSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFS-----IPR-SSIAENPFTSL 443 (1744)
Q Consensus 373 lkarTirEFDd~~t-a-p~~Gf~sv~eYY~~aS~~~~L~~IkVPVLIIhG-DDp~VP~~a-----ip~-~la~~nPnv~L 443 (1744)
.+ .+...+. . +.........+ .......+..+++|+|+++| .|+..+... .+. .....++++++
T Consensus 173 ~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~~v~~ 245 (274)
T TIGR03100 173 LR-----GLGDALLKARQKGDEVAHGGL--AERMKAGLERFQGPVLFILSGNDLTAQEFADSVLGEPAWRGALEDPGIER 245 (274)
T ss_pred HH-----HHHHHHHhhhhcCCCcccchH--HHHHHHHHHhcCCcEEEEEcCcchhHHHHHHHhccChhhHHHhhcCCeEE
Confidence 11 1111110 0 00000000000 01122456788999999999 887753210 011 11123589999
Q ss_pred EEecCCCccccCCCCchhHHHHHHHHHHHH
Q 000272 444 LLCSCLPSSVIGGGRAAESWCQNLVIEWLS 473 (1744)
Q Consensus 444 vLt~gGHH~gF~e~~~~~sWv~r~VlEFL~ 473 (1744)
+.+++++|+...+ ..+..+.+.|.+||+
T Consensus 246 ~~~~~~~H~l~~e--~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 246 VEIDGADHTFSDR--VWREWVAARTTEWLR 273 (274)
T ss_pred EecCCCCcccccH--HHHHHHHHHHHHHHh
Confidence 9999999954443 344568899999985
No 42
>PRK05855 short chain dehydrogenase; Validated
Probab=99.60 E-value=4.4e-14 Score=175.99 Aligned_cols=124 Identities=17% Similarity=0.157 Sum_probs=84.6
Q ss_pred EEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-CCC
Q 000272 189 VCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTS-RLF 267 (1744)
Q Consensus 189 e~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsp-rly 267 (1744)
+++...||..+++.++.+ ...|+||++||+. ++. .+++.++..| ..||+|+++|+||||.|....+ ..|
T Consensus 5 ~~~~~~~g~~l~~~~~g~-------~~~~~ivllHG~~-~~~-~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~ 74 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGD-------PDRPTVVLVHGYP-DNH-EVWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAY 74 (582)
T ss_pred EEEEeeCCEEEEEEEcCC-------CCCCeEEEEcCCC-chH-HHHHHHHHHh-hcceEEEEecCCCCCCCCCCCccccc
Confidence 444556898998876643 1358999999984 333 3456677776 6789999999999999964332 223
Q ss_pred Cc-CcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCC
Q 000272 268 TA-ADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNP 325 (1744)
Q Consensus 268 ~a-g~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP 325 (1744)
+. ...+|+..+++++. +..+++++||||||.+++.++.+......+...+.++.+
T Consensus 75 ~~~~~a~dl~~~i~~l~---~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~ 130 (582)
T PRK05855 75 TLARLADDFAAVIDAVS---PDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGP 130 (582)
T ss_pred CHHHHHHHHHHHHHHhC---CCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCC
Confidence 22 34678888888763 234699999999999998887663222234445555544
No 43
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.60 E-value=1.2e-13 Score=167.87 Aligned_cols=106 Identities=16% Similarity=0.189 Sum_probs=69.6
Q ss_pred CCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHH-HHHHHHHHHHhhCCCCcEEE
Q 000272 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSD-DICTAIQFIGKARPWTTLMS 293 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~td-DL~aaId~LrkryP~spIvL 293 (1744)
.+|+||++||++ ++...|. ..+..+.+ +|+|+++|+||||.|.............. ++.+.+....+.....++++
T Consensus 104 ~~p~vvllHG~~-~~~~~~~-~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~l 180 (402)
T PLN02894 104 DAPTLVMVHGYG-ASQGFFF-RNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFIL 180 (402)
T ss_pred CCCEEEEECCCC-cchhHHH-HHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCCeEE
Confidence 468999999984 4444444 44556554 69999999999999864321111111111 12222222222334468999
Q ss_pred EEecHHHHHHHHHHHHhCCCCCceEEEEecCC
Q 000272 294 VGWGYGANMLTKYLAEVGERTPLTAVTCIDNP 325 (1744)
Q Consensus 294 VGhSMGG~IaL~YLae~ge~s~L~AaVlISpP 325 (1744)
+||||||.+++.|+.++++ .+.++|+++++
T Consensus 181 vGhS~GG~la~~~a~~~p~--~v~~lvl~~p~ 210 (402)
T PLN02894 181 LGHSFGGYVAAKYALKHPE--HVQHLILVGPA 210 (402)
T ss_pred EEECHHHHHHHHHHHhCch--hhcEEEEECCc
Confidence 9999999999999999875 58888888654
No 44
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.59 E-value=1e-14 Score=172.77 Aligned_cols=238 Identities=13% Similarity=0.115 Sum_probs=125.6
Q ss_pred EEEEEcCCCCCchh----------HHHHHHHH---HHHhCCcEEEEEcCCCCCCCCCCCCCCCC-cCcHHHHHHHHHHHH
Q 000272 218 TLLLVPGTAEGSIE----------KRIRLFVC---EALRRGFFPVVMNPRGCGGSPLTTSRLFT-AADSDDICTAIQFIG 283 (1744)
Q Consensus 218 ~VVLLHGltGGS~~----------sYIr~La~---~La~~GYrVVVfD~RGhGgSpltsprly~-ag~tdDL~aaId~Lr 283 (1744)
++||+||+.+++.. .+|..++. .|...+|+|+++|+||||.|... .+. ....+|+.++++++.
T Consensus 59 p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~---~~~~~~~a~dl~~ll~~l~ 135 (343)
T PRK08775 59 PVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDV---PIDTADQADAIALLLDALG 135 (343)
T ss_pred CEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCC---CCCHHHHHHHHHHHHHHcC
Confidence 46666665444332 14555554 34456899999999999987422 222 234577777777653
Q ss_pred hhCCCCc-EEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHhHHHH---------HH--HHHH
Q 000272 284 KARPWTT-LMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKL---------AN--GLID 351 (1744)
Q Consensus 284 kryP~sp-IvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly~~~L---------~~--~Lk~ 351 (1744)
..+ ++++||||||++++.++.++|+ .+.++|++++..........+ ........ .. .+.+
T Consensus 136 ----l~~~~~lvG~SmGG~vA~~~A~~~P~--~V~~LvLi~s~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (343)
T PRK08775 136 ----IARLHAFVGYSYGALVGLQFASRHPA--RVRTLVVVSGAHRAHPYAAAW--RALQRRAVALGQLQCAEKHGLALAR 207 (343)
T ss_pred ----CCcceEEEEECHHHHHHHHHHHHChH--hhheEEEECccccCCHHHHHH--HHHHHHHHHcCCCCCCchhHHHHHH
Confidence 334 5799999999999999999876 589999998754322110000 00000000 00 0000
Q ss_pred -H-HH------hhhhhhhccCC------CcCHHHHhhhhcHHHHHHHHhhhccchhhHHHHHhhcC-cchhcCcCCccEE
Q 000272 352 -I-LR------SNKELFKGRAK------GFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSS-TRSVVGNIKIPVL 416 (1744)
Q Consensus 352 -~-L~------r~~~lf~~~~~------~~Did~vlkarTirEFDd~~tap~~Gf~sv~eYY~~aS-~~~~L~~IkVPVL 416 (1744)
. +. .....|..... ..+..... ......+.. .........+.+... ....+.+|++|+|
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~I~~PtL 281 (343)
T PRK08775 208 QLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYL-----DAAGAQYVA-RTPVNAYLRLSESIDLHRVDPEAIRVPTV 281 (343)
T ss_pred HHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHH-----HHHHHHHHH-hcChhHHHHHHHHHhhcCCChhcCCCCeE
Confidence 0 00 00001100000 00000000 000000000 000000001111111 1224789999999
Q ss_pred EEEe-CCCCCCCCChHHHHHhcC-CCeEEEEecC-CCccccCCCCchhHHHHHHHHHHHHHHH
Q 000272 417 FIQN-DAGAVPPFSIPRSSIAEN-PFTSLLLCSC-LPSSVIGGGRAAESWCQNLVIEWLSAVE 476 (1744)
Q Consensus 417 IIhG-DDp~VP~~aip~~la~~n-Pnv~LvLt~g-GHH~gF~e~~~~~sWv~r~VlEFL~av~ 476 (1744)
+|+| +|.++|+..... ..... |+.+++++++ +||..+.+. +..+.+.+.+||.++.
T Consensus 282 vi~G~~D~~~p~~~~~~-~~~~i~p~a~l~~i~~~aGH~~~lE~---Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 282 VVAVEGDRLVPLADLVE-LAEGLGPRGSLRVLRSPYGHDAFLKE---TDRIDAILTTALRSTG 340 (343)
T ss_pred EEEeCCCEeeCHHHHHH-HHHHcCCCCeEEEEeCCccHHHHhcC---HHHHHHHHHHHHHhcc
Confidence 9999 898898764433 34444 7899999974 666666652 4568899999998764
No 45
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.58 E-value=2e-14 Score=170.90 Aligned_cols=106 Identities=18% Similarity=0.184 Sum_probs=85.4
Q ss_pred CcEEEEEcCCCCCchhHHH------HHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcC-cH-HHHHHHHHHHHhhCC
Q 000272 216 DTTLLLVPGTAEGSIEKRI------RLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAA-DS-DDICTAIQFIGKARP 287 (1744)
Q Consensus 216 ~P~VVLLHGltGGS~~sYI------r~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag-~t-dDL~aaId~LrkryP 287 (1744)
+++||++||+.. ..|+ +.++.+|+++||+|+++|+||+|.+.. .+... +. +|+.+++++++++.+
T Consensus 62 ~~pvl~v~~~~~---~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~----~~~~~d~~~~~~~~~v~~l~~~~~ 134 (350)
T TIGR01836 62 KTPLLIVYALVN---RPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADR----YLTLDDYINGYIDKCVDYICRTSK 134 (350)
T ss_pred CCcEEEeccccc---cceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHh----cCCHHHHHHHHHHHHHHHHHHHhC
Confidence 457999999732 2233 578999999999999999999987642 12222 22 568999999999888
Q ss_pred CCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhh
Q 000272 288 WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEE 330 (1744)
Q Consensus 288 ~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~e 330 (1744)
..+++++||||||.+++.|++.+++ .+.+++++++|+++..
T Consensus 135 ~~~i~lvGhS~GG~i~~~~~~~~~~--~v~~lv~~~~p~~~~~ 175 (350)
T TIGR01836 135 LDQISLLGICQGGTFSLCYAALYPD--KIKNLVTMVTPVDFET 175 (350)
T ss_pred CCcccEEEECHHHHHHHHHHHhCch--heeeEEEeccccccCC
Confidence 8899999999999999999998765 5899999999998753
No 46
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.57 E-value=1.6e-14 Score=156.35 Aligned_cols=206 Identities=20% Similarity=0.218 Sum_probs=121.3
Q ss_pred cEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCC
Q 000272 246 FFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNP 325 (1744)
Q Consensus 246 YrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP 325 (1744)
|+|+++|+||+|.|.......+..-..+|+.+.+++++++.+..+++++||||||++++.|++++|+ .+.++++++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~--~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPE--RVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGG--GEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCch--hhcCcEEEeee
Confidence 8999999999999873111223334578999999999999898899999999999999999999987 79999999887
Q ss_pred CC--hhhhhccCchhHHhHHHHHHHHHH----HHHhhhhhhh----c--cCCCcCHHHHhhhhcHHHHHHHHhhhccchh
Q 000272 326 FD--LEEATRSSPHHIALDEKLANGLID----ILRSNKELFK----G--RAKGFDVEKALSAKSVRDFEKAISMVSYGFE 393 (1744)
Q Consensus 326 ~D--l~es~~slp~~~ly~~~L~~~Lk~----~L~r~~~lf~----~--~~~~~Did~vlkarTirEFDd~~tap~~Gf~ 393 (1744)
.. .......... ..+...+...... ........+. . .....+............+.. .......+.
T Consensus 79 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 156 (230)
T PF00561_consen 79 PDLPDGLWNRIWPR-GNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAE-TDAFDNMFW 156 (230)
T ss_dssp SHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCH-HHHHHHHHH
T ss_pred ccchhhhhHHHHhh-hhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHH-HHHHhhhcc
Confidence 31 1111110000 0111111111100 0000000000 0 000000000000000111000 000000111
Q ss_pred hHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCccccCC
Q 000272 394 AIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGG 456 (1744)
Q Consensus 394 sv~eYY~~aS~~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e 456 (1744)
....++........+.+|++|+|+++| +|+++|+..... ..+..|+.++++++++||..+.+
T Consensus 157 ~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~-~~~~~~~~~~~~~~~~GH~~~~~ 219 (230)
T PF00561_consen 157 NALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQ-LAKLIPNSQLVLIEGSGHFAFLE 219 (230)
T ss_dssp HHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHH-HHHHSTTEEEEEETTCCSTHHHH
T ss_pred ccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHH-HHHhcCCCEEEECCCCChHHHhc
Confidence 244556666667789999999999999 999999876654 56789999999999977777664
No 47
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.56 E-value=3.5e-14 Score=168.32 Aligned_cols=274 Identities=17% Similarity=0.141 Sum_probs=150.9
Q ss_pred eEEEEEEcCCCc-EEEEEecCCCcc--ccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhC-CcEEEEEcCCCCC-CCC
Q 000272 186 YQRVCVNTEDGG-VISLDWPSNLDL--HEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRR-GFFPVVMNPRGCG-GSP 260 (1744)
Q Consensus 186 YeRe~L~t~DGG-~IaLDW~~p~~~--~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~-GYrVVVfD~RGhG-gSp 260 (1744)
++...++.+.|. .+..-|...... .+....+++||++|||. ++. .++++.+..+.+. |++|+++|..|+| .|+
T Consensus 25 ~~~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~-~~~-~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~ 102 (326)
T KOG1454|consen 25 LRSTSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFG-ASS-FSWRRVVPLLSKAKGLRVLAIDLPGHGYSSP 102 (326)
T ss_pred ccceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEecccc-CCc-ccHhhhccccccccceEEEEEecCCCCcCCC
Confidence 344556666674 566678765310 01113578999999994 343 3456666666555 6999999999999 444
Q ss_pred CCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEE---EecCCCChhhhhccCch
Q 000272 261 LTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVT---CIDNPFDLEEATRSSPH 337 (1744)
Q Consensus 261 ltsprly~ag~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaV---lISpP~Dl~es~~slp~ 337 (1744)
......|. ..+....+..+...+...+++++||||||.+++.||+.+|+ .++.++ +++++..........
T Consensus 103 ~~~~~~y~---~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~--~V~~lv~~~~~~~~~~~~~~~~~~-- 175 (326)
T KOG1454|consen 103 LPRGPLYT---LRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPE--TVDSLVLLDLLGPPVYSTPKGIKG-- 175 (326)
T ss_pred CCCCCcee---hhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcc--cccceeeecccccccccCCcchhH--
Confidence 44333343 35566666666566667789999999999999999999987 477777 666665543322110
Q ss_pred hHHhHHHHHHHHHHHHHhhhhhhhccCCCcCHHHHhh---------hhcHHHHHHHHhhhc--cchhh-HHHHHhh----
Q 000272 338 HIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALS---------AKSVRDFEKAISMVS--YGFEA-IEDFYSK---- 401 (1744)
Q Consensus 338 ~~ly~~~L~~~Lk~~L~r~~~lf~~~~~~~Did~vlk---------arTirEFDd~~tap~--~Gf~s-v~eYY~~---- 401 (1744)
..+.+.. .....+.................+.. ......+...+..+. +.+++ ..+++..
T Consensus 176 ---~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (326)
T KOG1454|consen 176 ---LRRLLDK-FLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGF 251 (326)
T ss_pred ---HHHhhhh-hccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCc
Confidence 0000000 00000000000000000000000000 001111111111110 00000 0011110
Q ss_pred -cCcchhcCcCC-ccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHHH
Q 000272 402 -SSTRSVVGNIK-IPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVE 476 (1744)
Q Consensus 402 -aS~~~~L~~Ik-VPVLIIhG-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~ 476 (1744)
......+.+|. +|+|+|+| .|+++|.+ ......+.+|++++++++++||+-..+ .+.-+.+.+..|+....
T Consensus 252 ~~~~~~~~~~i~~~pvlii~G~~D~~~p~~-~~~~~~~~~pn~~~~~I~~~gH~~h~e---~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 252 DENLLSLIKKIWKCPVLIIWGDKDQIVPLE-LAEELKKKLPNAELVEIPGAGHLPHLE---RPEEVAALLRSFIARLR 325 (326)
T ss_pred cchHHHhhccccCCceEEEEcCcCCccCHH-HHHHHHhhCCCceEEEeCCCCcccccC---CHHHHHHHHHHHHHHhc
Confidence 12234567777 99999999 99999987 334555667999999999666655554 24457889999998653
No 48
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.56 E-value=6.3e-14 Score=166.51 Aligned_cols=110 Identities=13% Similarity=0.115 Sum_probs=72.8
Q ss_pred CcEEEEEcCCCCCchhH---------HHHHHH---HHHHhCCcEEEEEcCCC--CCCCCCCC----CCCCC----cCcHH
Q 000272 216 DTTLLLVPGTAEGSIEK---------RIRLFV---CEALRRGFFPVVMNPRG--CGGSPLTT----SRLFT----AADSD 273 (1744)
Q Consensus 216 ~P~VVLLHGltGGS~~s---------YIr~La---~~La~~GYrVVVfD~RG--hGgSplts----prly~----ag~td 273 (1744)
+++||++||++++++.. +|..++ ..+...+|+|+++|+|| ||.|.... ...|. .-..+
T Consensus 31 ~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~ 110 (351)
T TIGR01392 31 SNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIR 110 (351)
T ss_pred CCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHH
Confidence 47899999986543322 354454 25667899999999999 44443211 11111 01234
Q ss_pred HHHHHHHHHHhhCCCCc-EEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCC
Q 000272 274 DICTAIQFIGKARPWTT-LMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFD 327 (1744)
Q Consensus 274 DL~aaId~LrkryP~sp-IvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~D 327 (1744)
|+.+.+..+.++.+..+ ++++||||||++++.|+.++|+ .+.++|++++...
T Consensus 111 ~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~ 163 (351)
T TIGR01392 111 DDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPE--RVRAIVVLATSAR 163 (351)
T ss_pred HHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChH--hhheEEEEccCCc
Confidence 44444444444445567 9999999999999999999875 5889999887654
No 49
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.56 E-value=8.2e-14 Score=164.45 Aligned_cols=232 Identities=16% Similarity=0.151 Sum_probs=126.1
Q ss_pred CCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEEE
Q 000272 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSV 294 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIvLV 294 (1744)
..++||++||+. ++... +..++..+. .+|+|+++|+||||.|...... ...+++.+.+..+...++..+++++
T Consensus 130 ~~~~vl~~HG~~-~~~~~-~~~~~~~l~-~~~~v~~~d~~g~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~lv 202 (371)
T PRK14875 130 DGTPVVLIHGFG-GDLNN-WLFNHAALA-AGRPVIALDLPGHGASSKAVGA----GSLDELAAAVLAFLDALGIERAHLV 202 (371)
T ss_pred CCCeEEEECCCC-Cccch-HHHHHHHHh-cCCEEEEEcCCCCCCCCCCCCC----CCHHHHHHHHHHHHHhcCCccEEEE
Confidence 358899999984 44444 345555554 4599999999999998532221 2344555555555555565689999
Q ss_pred EecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHhHHHHHHHHHHHHHhhhhhhhccCCCcCH---HH
Q 000272 295 GWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRAKGFDV---EK 371 (1744)
Q Consensus 295 GhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly~~~L~~~Lk~~L~r~~~lf~~~~~~~Di---d~ 371 (1744)
||||||.+++.++..+++ .+.++++++++.........+ ...+........+...+.. .+... ..+.. +.
T Consensus 203 G~S~Gg~~a~~~a~~~~~--~v~~lv~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~ 275 (371)
T PRK14875 203 GHSMGGAVALRLAARAPQ--RVASLTLIAPAGLGPEINGDY-IDGFVAAESRRELKPVLEL---LFADP-ALVTRQMVED 275 (371)
T ss_pred eechHHHHHHHHHHhCch--heeEEEEECcCCcCcccchhH-HHHhhcccchhHHHHHHHH---HhcCh-hhCCHHHHHH
Confidence 999999999999988764 588888887653221110000 0000000000011111110 01000 00000 00
Q ss_pred HhhhhcHHHHHHHHhhhccchhhHHHHH-h----hcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEE
Q 000272 372 ALSAKSVRDFEKAISMVSYGFEAIEDFY-S----KSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLL 445 (1744)
Q Consensus 372 vlkarTirEFDd~~tap~~Gf~sv~eYY-~----~aS~~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la~~nPnv~LvL 445 (1744)
.........+...+ .....++ . ..+....+.++++|+|+|+| +|.++|+.... ...+++.+.+
T Consensus 276 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~----~l~~~~~~~~ 344 (371)
T PRK14875 276 LLKYKRLDGVDDAL-------RALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQ----GLPDGVAVHV 344 (371)
T ss_pred HHHHhccccHHHHH-------HHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHh----hccCCCeEEE
Confidence 00000000000000 0001111 0 11223467789999999999 89988864321 2245788999
Q ss_pred ecCCCccccCCCCchhHHHHHHHHHHHHH
Q 000272 446 CSCLPSSVIGGGRAAESWCQNLVIEWLSA 474 (1744)
Q Consensus 446 t~gGHH~gF~e~~~~~sWv~r~VlEFL~a 474 (1744)
++++||..+.+. ..++.+.+.+||+.
T Consensus 345 ~~~~gH~~~~e~---p~~~~~~i~~fl~~ 370 (371)
T PRK14875 345 LPGAGHMPQMEA---AADVNRLLAEFLGK 370 (371)
T ss_pred eCCCCCChhhhC---HHHHHHHHHHHhcc
Confidence 998888766652 45677888888853
No 50
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.54 E-value=1.8e-13 Score=174.66 Aligned_cols=245 Identities=17% Similarity=0.166 Sum_probs=161.6
Q ss_pred CcceEEEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q 000272 183 KLEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLT 262 (1744)
Q Consensus 183 ~V~YeRe~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSplt 262 (1744)
....+...+...||.++.. |...++........|+||++||.+.+.....+....+.++.+||.|+.+|+||.++-...
T Consensus 362 ~~~~e~~~~~~~dG~~i~~-~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~ 440 (620)
T COG1506 362 LAEPEPVTYKSNDGETIHG-WLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGRE 440 (620)
T ss_pred cCCceEEEEEcCCCCEEEE-EEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHH
Confidence 4556778899999999885 554332222222358999999976433332355677889999999999999998774211
Q ss_pred ----CCCCCCcCcHHHHHHHHHHHHhhCCC---CcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccC
Q 000272 263 ----TSRLFTAADSDDICTAIQFIGKARPW---TTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSS 335 (1744)
Q Consensus 263 ----sprly~ag~tdDL~aaId~LrkryP~---spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~sl 335 (1744)
...-+.....+|+.++++++.+ +|. .++.++|||+||.+++..++..+ .++++++..+..+.......
T Consensus 441 F~~~~~~~~g~~~~~D~~~~~~~l~~-~~~~d~~ri~i~G~SyGGymtl~~~~~~~---~f~a~~~~~~~~~~~~~~~~- 515 (620)
T COG1506 441 FADAIRGDWGGVDLEDLIAAVDALVK-LPLVDPERIGITGGSYGGYMTLLAATKTP---RFKAAVAVAGGVDWLLYFGE- 515 (620)
T ss_pred HHHhhhhccCCccHHHHHHHHHHHHh-CCCcChHHeEEeccChHHHHHHHHHhcCc---hhheEEeccCcchhhhhccc-
Confidence 1223444568999999996644 442 48999999999999999988764 47888877665543321100
Q ss_pred chhHHhHHHHHHHHHHHHHhhhhhhhccCCCcCHHHHhhhhcHHHHHHHHhhhccchhhHHHHHhhcCcchhcCcCCccE
Q 000272 336 PHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPV 415 (1744)
Q Consensus 336 p~~~ly~~~L~~~Lk~~L~r~~~lf~~~~~~~Did~vlkarTirEFDd~~tap~~Gf~sv~eYY~~aS~~~~L~~IkVPV 415 (1744)
....+. ++++ + . ..+.....++|...|+....++|++|+
T Consensus 516 ---------~~~~~~----------------~~~~------------~-~---~~~~~~~~~~~~~~sp~~~~~~i~~P~ 554 (620)
T COG1506 516 ---------STEGLR----------------FDPE------------E-N---GGGPPEDREKYEDRSPIFYADNIKTPL 554 (620)
T ss_pred ---------cchhhc----------------CCHH------------H-h---CCCcccChHHHHhcChhhhhcccCCCE
Confidence 000000 0000 0 0 001000356788889999999999999
Q ss_pred EEEEe-CCCCCCCCChH---HHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHHH
Q 000272 416 LFIQN-DAGAVPPFSIP---RSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVE 476 (1744)
Q Consensus 416 LIIhG-DDp~VP~~aip---~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~ 476 (1744)
|+||| .|+.||.+... ..+....-.++++++|+.+|.+-.. .+..-..+.+++||+...
T Consensus 555 LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~--~~~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 555 LLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRP--ENRVKVLKEILDWFKRHL 617 (620)
T ss_pred EEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCc--hhHHHHHHHHHHHHHHHh
Confidence 99999 99999875432 2333456778999999999955542 222224578888887654
No 51
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.54 E-value=3.3e-13 Score=162.59 Aligned_cols=105 Identities=13% Similarity=0.142 Sum_probs=71.4
Q ss_pred CcEEEEEcCCCCCchhH------------HHHHHHH---HHHhCCcEEEEEcCCC-CCCCCCCC---C---C-------C
Q 000272 216 DTTLLLVPGTAEGSIEK------------RIRLFVC---EALRRGFFPVVMNPRG-CGGSPLTT---S---R-------L 266 (1744)
Q Consensus 216 ~P~VVLLHGltGGS~~s------------YIr~La~---~La~~GYrVVVfD~RG-hGgSplts---p---r-------l 266 (1744)
+|+||++||+++ +... +|..++. .+...+|+|+++|+|| ||+|.... + . .
T Consensus 48 ~p~vvl~HG~~~-~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~ 126 (379)
T PRK00175 48 SNAVLICHALTG-DHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPV 126 (379)
T ss_pred CCEEEEeCCcCC-chhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCc
Confidence 589999999865 4442 3444442 4446799999999998 35553211 0 0 1
Q ss_pred CCc-CcHHHHHHHHHHHHhhCCCCc-EEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCC
Q 000272 267 FTA-ADSDDICTAIQFIGKARPWTT-LMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFD 327 (1744)
Q Consensus 267 y~a-g~tdDL~aaId~LrkryP~sp-IvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~D 327 (1744)
|+. .+.+|+.++++++ +..+ .+++||||||++++.|+.++++ .+.++|++++...
T Consensus 127 ~~~~~~~~~~~~~l~~l----~~~~~~~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~ 183 (379)
T PRK00175 127 ITIRDWVRAQARLLDAL----GITRLAAVVGGSMGGMQALEWAIDYPD--RVRSALVIASSAR 183 (379)
T ss_pred CCHHHHHHHHHHHHHHh----CCCCceEEEEECHHHHHHHHHHHhChH--hhhEEEEECCCcc
Confidence 221 2345556666554 4456 5899999999999999999876 6889999876543
No 52
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.53 E-value=5.8e-13 Score=161.16 Aligned_cols=104 Identities=14% Similarity=0.171 Sum_probs=78.1
Q ss_pred CCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC---CCCc-CcHHHHHHHHHHHHhhCCCCc
Q 000272 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSR---LFTA-ADSDDICTAIQFIGKARPWTT 290 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltspr---ly~a-g~tdDL~aaId~LrkryP~sp 290 (1744)
.+|+||++||+. ++... ++.++..|. .+|+|+++|+||||.|...... .|+. .+.+|+.++++++. ..+
T Consensus 126 ~~~~ivllHG~~-~~~~~-w~~~~~~L~-~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~----~~~ 198 (383)
T PLN03084 126 NNPPVLLIHGFP-SQAYS-YRKVLPVLS-KNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELK----SDK 198 (383)
T ss_pred CCCeEEEECCCC-CCHHH-HHHHHHHHh-cCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhC----CCC
Confidence 358999999984 34333 567777765 5899999999999999654321 2322 34567777777663 357
Q ss_pred EEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCC
Q 000272 291 LMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFD 327 (1744)
Q Consensus 291 IvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~D 327 (1744)
++++||||||++++.|+.++++ .+.++|+++++..
T Consensus 199 ~~LvG~s~GG~ia~~~a~~~P~--~v~~lILi~~~~~ 233 (383)
T PLN03084 199 VSLVVQGYFSPPVVKYASAHPD--KIKKLILLNPPLT 233 (383)
T ss_pred ceEEEECHHHHHHHHHHHhChH--hhcEEEEECCCCc
Confidence 9999999999999999999876 5999999988753
No 53
>PRK10566 esterase; Provisional
Probab=99.52 E-value=1.7e-13 Score=153.51 Aligned_cols=206 Identities=14% Similarity=0.113 Sum_probs=120.5
Q ss_pred CCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC--CC---CCc--CcHHHHHHHHHHHHhhC-
Q 000272 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTS--RL---FTA--ADSDDICTAIQFIGKAR- 286 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsp--rl---y~a--g~tdDL~aaId~Lrkry- 286 (1744)
..|+||++||+. ++.. .+..++..++++||+|+++|+||||.+....+ .. +.. ...+|+.++++++.++.
T Consensus 26 ~~p~vv~~HG~~-~~~~-~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (249)
T PRK10566 26 PLPTVFFYHGFT-SSKL-VYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGW 103 (249)
T ss_pred CCCEEEEeCCCC-cccc-hHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 468999999984 3433 34568889999999999999999997521111 11 100 12478888888887653
Q ss_pred -CCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHhHHHHHHHHHHHHHhhhhhhhccCC
Q 000272 287 -PWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRAK 365 (1744)
Q Consensus 287 -P~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly~~~L~~~Lk~~L~r~~~lf~~~~~ 365 (1744)
...+++++||||||.+++.+++..++ +.+++.+..+..... +.+.+ ++....
T Consensus 104 ~~~~~i~v~G~S~Gg~~al~~~~~~~~---~~~~~~~~~~~~~~~------------------~~~~~------~~~~~~ 156 (249)
T PRK10566 104 LLDDRLAVGGASMGGMTALGIMARHPW---VKCVASLMGSGYFTS------------------LARTL------FPPLIP 156 (249)
T ss_pred cCccceeEEeecccHHHHHHHHHhCCC---eeEEEEeeCcHHHHH------------------HHHHh------cccccc
Confidence 34689999999999999988877653 555554432211100 00000 000000
Q ss_pred CcCHHHHhhhhcHHHHHHHHhhhccchhhHHHHHhhcCcchhcCcC-CccEEEEEe-CCCCCCCCChHH--HHHhc--CC
Q 000272 366 GFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNI-KIPVLFIQN-DAGAVPPFSIPR--SSIAE--NP 439 (1744)
Q Consensus 366 ~~Did~vlkarTirEFDd~~tap~~Gf~sv~eYY~~aS~~~~L~~I-kVPVLIIhG-DDp~VP~~aip~--~la~~--nP 439 (1744)
.. ......++..+ .+ +...+....+.++ ++|+|+||| +|+++|+..... +.... .+
T Consensus 157 -~~------~~~~~~~~~~~-~~----------~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~ 218 (249)
T PRK10566 157 -ET------AAQQAEFNNIV-AP----------LAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLD 218 (249)
T ss_pred -cc------cccHHHHHHHH-HH----------HhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCC
Confidence 00 00111111111 00 1111233446666 699999999 999999754322 11122 22
Q ss_pred -CeEEEEecCCCccccCCCCchhHHHHHHHHHHHHH
Q 000272 440 -FTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSA 474 (1744)
Q Consensus 440 -nv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~a 474 (1744)
++.++++++.+|... +. ..+.+.+||+.
T Consensus 219 ~~~~~~~~~~~~H~~~-----~~--~~~~~~~fl~~ 247 (249)
T PRK10566 219 KNLTCLWEPGVRHRIT-----PE--ALDAGVAFFRQ 247 (249)
T ss_pred cceEEEecCCCCCccC-----HH--HHHHHHHHHHh
Confidence 467888999888532 12 34789999974
No 54
>COG1266 Predicted metal-dependent membrane protease [General function prediction only]
Probab=99.51 E-value=5.6e-13 Score=146.83 Aligned_cols=84 Identities=35% Similarity=0.324 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCchhhHHHHHHHhHhcCC----cchHHHHHHHHHHHHHHHHhcCCcchHH
Q 000272 1599 QGIVTATVVVLVEELLFRSWLPEEIAADLDYHRGIIISGLAFALSQRS----PQAIPGLWLLSLALAGVRQRSQGSLSVP 1674 (1744)
Q Consensus 1599 ~~lllallv~l~EELLFRG~L~~~L~~~~g~~~AIIISSLLFALlHls----l~~~i~lfLlGLvLa~aylrttGSLWlp 1674 (1744)
..+.+.+++|++||++|||++++.+.++++.+.|+++||++||++|.. +..++..+.+|++++++|.| +||||.+
T Consensus 125 ~~~~~~i~~~l~EEl~fRg~l~~~l~~~~~~~~a~iissllFal~H~~~~~~~~~~~~~~~~gli~~~~~~~-t~~l~~~ 203 (226)
T COG1266 125 FFLVLLILAPLAEELLFRGYLLGALARRFGPLLAIIISSLLFALLHLPNGLLLLYFLLYFIAGLILGLLYLR-TGSLWVP 203 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHhcCcHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHH-hCCcHHH
Confidence 345556677999999999999999999999999999999999999994 47788899999999999999 5689999
Q ss_pred HHHHhHHhh
Q 000272 1675 IGLRTGIMA 1683 (1744)
Q Consensus 1675 IGLHagWn~ 1683 (1744)
|++|+.||.
T Consensus 204 i~~H~~~N~ 212 (226)
T COG1266 204 ILLHALINL 212 (226)
T ss_pred HHHHHHHHH
Confidence 999999995
No 55
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.51 E-value=3.2e-13 Score=157.13 Aligned_cols=247 Identities=17% Similarity=0.177 Sum_probs=146.4
Q ss_pred CCCcEEEEEcCCCCCchhHH-HHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-CCCCc-CcHHHHHHHHHHHHhhCCCCc
Q 000272 214 GLDTTLLLVPGTAEGSIEKR-IRLFVCEALRRGFFPVVMNPRGCGGSPLTTS-RLFTA-ADSDDICTAIQFIGKARPWTT 290 (1744)
Q Consensus 214 g~~P~VVLLHGltGGS~~sY-Ir~La~~La~~GYrVVVfD~RGhGgSpltsp-rly~a-g~tdDL~aaId~LrkryP~sp 290 (1744)
+.+|+|+++||+.. ..| +|+....++.+||||+++|+||+|.|..... ..|+. ....|+..+|+++. ..+
T Consensus 42 ~~gP~illlHGfPe---~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg----~~k 114 (322)
T KOG4178|consen 42 GDGPIVLLLHGFPE---SWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLG----LKK 114 (322)
T ss_pred CCCCEEEEEccCCc---cchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhc----cce
Confidence 46899999999964 233 7788889999999999999999999965443 33333 23578888888885 579
Q ss_pred EEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChh-----hhhccCc---hh-----------HHhHHHHHHHHHH
Q 000272 291 LMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLE-----EATRSSP---HH-----------IALDEKLANGLID 351 (1744)
Q Consensus 291 IvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~-----es~~slp---~~-----------~ly~~~L~~~Lk~ 351 (1744)
++++||+|||+++...+..+|+ ++.+.|+++.++... ......+ +. ..+....++.+..
T Consensus 115 ~~lvgHDwGaivaw~la~~~Pe--rv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~ 192 (322)
T KOG4178|consen 115 AFLVGHDWGAIVAWRLALFYPE--RVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVK 192 (322)
T ss_pred eEEEeccchhHHHHHHHHhChh--hcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccchhHHhHH
Confidence 9999999999999999999887 699999998777611 0111100 00 0111111122221
Q ss_pred HHHhhhhhhhccCC---CcCHHHHhhhhcHHHHHHHHhhhccchhhHHHHHhhcC-----cchhcCcCCccEEEEEe-CC
Q 000272 352 ILRSNKELFKGRAK---GFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSS-----TRSVVGNIKIPVLFIQN-DA 422 (1744)
Q Consensus 352 ~L~r~~~lf~~~~~---~~Did~vlkarTirEFDd~~tap~~Gf~sv~eYY~~aS-----~~~~L~~IkVPVLIIhG-DD 422 (1744)
.+.......+...+ ... ........++-++..+ ..-||...-.||+... ....+.+|++|+++|+| .|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~-~~w~t~edi~~~~~~f--~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D 269 (322)
T KOG4178|consen 193 TFRTRKTPGPLIVPKQPNEN-PLWLTEEDIAFYVSKF--QIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLD 269 (322)
T ss_pred hhhccccCCccccCCCCCCc-cchhhHHHHHHHHhcc--ccccccccchhhHHHhhCchhccccccccccceEEEEecCc
Confidence 11111100000000 000 0000111222222222 1123333344555432 24568899999999999 89
Q ss_pred CCCCCCChHHHHHhcCCCe-EEEEecCCCccccCCCCchhHHHHHHHHHHHHHH
Q 000272 423 GAVPPFSIPRSSIAENPFT-SLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAV 475 (1744)
Q Consensus 423 p~VP~~aip~~la~~nPnv-~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av 475 (1744)
++.+.........+..|+. +.++.+++||..-.+ ...-+.+.+.+||++.
T Consensus 270 ~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe---~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 270 PVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQE---KPQEVNQAILGFINSF 320 (322)
T ss_pred ccccchhHHHHHHHhhccccceEEecCCccccccc---CHHHHHHHHHHHHHhh
Confidence 8877542211222334554 667888988844433 2445789999999865
No 56
>PF02517 Abi: CAAX protease self-immunity; InterPro: IPR003675 Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide is removed by one of the CAAX prenyl proteases). The family contains the Q03530 from SWISSPROT CAAX prenyl protease []. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding []. While these proteins are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity []. This family also includes lysostaphin resistance protein A [].; GO: 0016020 membrane
Probab=99.49 E-value=7.9e-14 Score=134.93 Aligned_cols=83 Identities=25% Similarity=0.257 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHhhcCCchhhHHHHHHHhHhcCCc-chHHHHHHHHHHHHHHHHhcCCcchHHHHHH
Q 000272 1600 GIVTATVVVLVEELLFRSWLPEEIAADLDYHRGIIISGLAFALSQRSP-QAIPGLWLLSLALAGVRQRSQGSLSVPIGLR 1678 (1744)
Q Consensus 1600 ~lllallv~l~EELLFRG~L~~~L~~~~g~~~AIIISSLLFALlHlsl-~~~i~lfLlGLvLa~aylrttGSLWlpIGLH 1678 (1744)
.+...++.|+.||++|||++++.+.++.+.+.++++++++||++|... +.++..+++|++++++|.| +||||.++.+|
T Consensus 7 ~~~~~~~~~~~EEl~fRg~l~~~l~~~~~~~~a~~is~~~f~~~H~~~~~~~~~~~~~g~~~~~~~~~-t~sl~~~i~~H 85 (91)
T PF02517_consen 7 FLVMILIAPIAEELFFRGFLFNRLRRRFNPWFAILISSLLFALWHLPNGPQFIYAFLFGLLFGYLYLR-TGSLWAAIIAH 85 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-cCChHHHHHHH
Confidence 455567789999999999999999999888999999999999999954 4589999999999999999 68999999999
Q ss_pred hHHhh
Q 000272 1679 TGIMA 1683 (1744)
Q Consensus 1679 agWn~ 1683 (1744)
+.||+
T Consensus 86 ~~~n~ 90 (91)
T PF02517_consen 86 ALWNL 90 (91)
T ss_pred HHHHc
Confidence 99985
No 57
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.48 E-value=1.3e-12 Score=150.87 Aligned_cols=106 Identities=11% Similarity=0.122 Sum_probs=74.0
Q ss_pred CCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEE
Q 000272 214 GLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMS 293 (1744)
Q Consensus 214 g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIvL 293 (1744)
+.+|+|||+||+.+ +.. .|..++..|.+.||+|+++|+||||.|+......++ ..++...+++++.......++++
T Consensus 16 ~~~p~vvliHG~~~-~~~-~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~--~~~~~~~l~~~i~~l~~~~~v~l 91 (273)
T PLN02211 16 RQPPHFVLIHGISG-GSW-CWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTT--FDEYNKPLIDFLSSLPENEKVIL 91 (273)
T ss_pred CCCCeEEEECCCCC-CcC-cHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCC--HHHHHHHHHHHHHhcCCCCCEEE
Confidence 34689999999843 433 356778888888999999999999987532222222 22233334444443323468999
Q ss_pred EEecHHHHHHHHHHHHhCCCCCceEEEEecCC
Q 000272 294 VGWGYGANMLTKYLAEVGERTPLTAVTCIDNP 325 (1744)
Q Consensus 294 VGhSMGG~IaL~YLae~ge~s~L~AaVlISpP 325 (1744)
|||||||.++..++..+++ .+.++|.+++.
T Consensus 92 vGhS~GG~v~~~~a~~~p~--~v~~lv~~~~~ 121 (273)
T PLN02211 92 VGHSAGGLSVTQAIHRFPK--KICLAVYVAAT 121 (273)
T ss_pred EEECchHHHHHHHHHhChh--heeEEEEeccc
Confidence 9999999999999987765 58888888653
No 58
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.44 E-value=6.5e-12 Score=146.87 Aligned_cols=138 Identities=17% Similarity=0.184 Sum_probs=94.7
Q ss_pred cCCcceEEEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCC
Q 000272 181 EGKLEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSP 260 (1744)
Q Consensus 181 ~p~V~YeRe~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSp 260 (1744)
.-+++|..+.+.++++..+..--.. .+.....++|++||+ |++...|++.+- .|++ .+.|+++|++|+|+|.
T Consensus 60 ~~~v~~~~~~v~i~~~~~iw~~~~~-----~~~~~~~plVliHGy-GAg~g~f~~Nf~-~La~-~~~vyaiDllG~G~SS 131 (365)
T KOG4409|consen 60 SVPVPYSKKYVRIPNGIEIWTITVS-----NESANKTPLVLIHGY-GAGLGLFFRNFD-DLAK-IRNVYAIDLLGFGRSS 131 (365)
T ss_pred hcCCCcceeeeecCCCceeEEEeec-----ccccCCCcEEEEecc-chhHHHHHHhhh-hhhh-cCceEEecccCCCCCC
Confidence 3468899999998866554321111 122457889999998 445556666653 4444 7999999999999996
Q ss_pred CCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChh
Q 000272 261 LTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLE 329 (1744)
Q Consensus 261 ltsprly~ag~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~ 329 (1744)
.+.-..-......-+.+.|+.-+...+-.+++++||||||.++..||.++|+ +|..+|+++| |.+.
T Consensus 132 RP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPe--rV~kLiLvsP-~Gf~ 197 (365)
T KOG4409|consen 132 RPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPE--RVEKLILVSP-WGFP 197 (365)
T ss_pred CCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChH--hhceEEEecc-cccc
Confidence 4321111111223455556666667777899999999999999999999998 4787777754 4443
No 59
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.44 E-value=6.1e-13 Score=146.78 Aligned_cols=194 Identities=19% Similarity=0.172 Sum_probs=123.8
Q ss_pred HHHHHHHhCCcEEEEEcCCCCCCCCCC----CCCCCCcCcHHHHHHHHHHHHhhCC--CCcEEEEEecHHHHHHHHHHHH
Q 000272 236 LFVCEALRRGFFPVVMNPRGCGGSPLT----TSRLFTAADSDDICTAIQFIGKARP--WTTLMSVGWGYGANMLTKYLAE 309 (1744)
Q Consensus 236 ~La~~La~~GYrVVVfD~RGhGgSplt----sprly~ag~tdDL~aaId~LrkryP--~spIvLVGhSMGG~IaL~YLae 309 (1744)
.....++++||.|+++|+||.++.... ....+.....+|+.++++++.+++. ..++.++|+|+||.+++..+..
T Consensus 5 ~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~ 84 (213)
T PF00326_consen 5 WNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQ 84 (213)
T ss_dssp HHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcc
Confidence 345678899999999999999865211 1112223457899999999988753 3699999999999999999987
Q ss_pred hCCCCCceEEEEecCCCChhhhhccCchhHHhHHHHHHHHHHHHHhhhhhhhccCCCcCHHHHhhhhcHHHHHHHHhhhc
Q 000272 310 VGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVS 389 (1744)
Q Consensus 310 ~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly~~~L~~~Lk~~L~r~~~lf~~~~~~~Did~vlkarTirEFDd~~tap~ 389 (1744)
+++ .++++++.++.+|+......... + .. . ++.. ...
T Consensus 85 ~~~--~f~a~v~~~g~~d~~~~~~~~~~---~----~~--------~-----------------------~~~~-~~~-- 121 (213)
T PF00326_consen 85 HPD--RFKAAVAGAGVSDLFSYYGTTDI---Y----TK--------A-----------------------EYLE-YGD-- 121 (213)
T ss_dssp TCC--GSSEEEEESE-SSTTCSBHHTCC---H----HH--------G-----------------------HHHH-HSS--
T ss_pred cce--eeeeeeccceecchhcccccccc---c----cc--------c-----------------------cccc-cCc--
Confidence 765 58899999888877543211000 0 00 0 0000 000
Q ss_pred cchhhHHHHHhhcCcchhcCc--CCccEEEEEe-CCCCCCCCChH---HHHHhcCCCeEEEEecCCCccccCCCCchhHH
Q 000272 390 YGFEAIEDFYSKSSTRSVVGN--IKIPVLFIQN-DAGAVPPFSIP---RSSIAENPFTSLLLCSCLPSSVIGGGRAAESW 463 (1744)
Q Consensus 390 ~Gf~sv~eYY~~aS~~~~L~~--IkVPVLIIhG-DDp~VP~~aip---~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sW 463 (1744)
.....+.|+..++...+.+ +++|+|++|| +|+.||+.... ..+.+....++++++++++|.+... .....
T Consensus 122 --~~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~-~~~~~- 197 (213)
T PF00326_consen 122 --PWDNPEFYRELSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNP-ENRRD- 197 (213)
T ss_dssp --TTTSHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSH-HHHHH-
T ss_pred --cchhhhhhhhhccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCc-hhHHH-
Confidence 0012334455556666667 8999999999 89999875332 2334445569999999999943332 22233
Q ss_pred HHHHHHHHHHHHH
Q 000272 464 CQNLVIEWLSAVE 476 (1744)
Q Consensus 464 v~r~VlEFL~av~ 476 (1744)
..+.+.+||+...
T Consensus 198 ~~~~~~~f~~~~l 210 (213)
T PF00326_consen 198 WYERILDFFDKYL 210 (213)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 3678889998654
No 60
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.44 E-value=2.8e-12 Score=161.72 Aligned_cols=133 Identities=17% Similarity=0.107 Sum_probs=101.0
Q ss_pred EEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchh---HHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCC
Q 000272 191 VNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIE---KRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLF 267 (1744)
Q Consensus 191 L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~---sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly 267 (1744)
|++.||..+..+++.|.. .+..|+||++||+.. ... .+....+..++++||.|+++|+||+|.|.......
T Consensus 1 i~~~DG~~L~~~~~~P~~----~~~~P~Il~~~gyg~-~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~- 74 (550)
T TIGR00976 1 VPMRDGTRLAIDVYRPAG----GGPVPVILSRTPYGK-DAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLL- 74 (550)
T ss_pred CcCCCCCEEEEEEEecCC----CCCCCEEEEecCCCC-chhhccccccccHHHHHhCCcEEEEEeccccccCCCceEec-
Confidence 467899999988886631 235689999999743 321 12233456788999999999999999997543222
Q ss_pred CcCcHHHHHHHHHHHHhh-CCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhh
Q 000272 268 TAADSDDICTAIQFIGKA-RPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEA 331 (1744)
Q Consensus 268 ~ag~tdDL~aaId~Lrkr-yP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es 331 (1744)
.....+|+.++|+++.++ +...+++++|+||||.+++.+++.++. .+++++..++..++...
T Consensus 75 ~~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~--~l~aiv~~~~~~d~~~~ 137 (550)
T TIGR00976 75 GSDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPP--ALRAIAPQEGVWDLYRD 137 (550)
T ss_pred CcccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCC--ceeEEeecCcccchhHh
Confidence 245679999999999876 234699999999999999999988654 68999998888887654
No 61
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.40 E-value=7.4e-12 Score=141.84 Aligned_cols=212 Identities=17% Similarity=0.091 Sum_probs=136.7
Q ss_pred EEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcC
Q 000272 191 VNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAA 270 (1744)
Q Consensus 191 L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag 270 (1744)
+++.-|..+.--.+.++ ....++|+++||.... -.....-+.......++.++.||++|.|.|.++... ..
T Consensus 40 ~~t~rgn~~~~~y~~~~-----~~~~~~lly~hGNa~D-lgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE---~n 110 (258)
T KOG1552|consen 40 VKTSRGNEIVCMYVRPP-----EAAHPTLLYSHGNAAD-LGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSE---RN 110 (258)
T ss_pred eecCCCCEEEEEEEcCc-----cccceEEEEcCCcccc-hHHHHHHHHHHhhcccceEEEEecccccccCCCccc---cc
Confidence 44555655543333332 1235899999996321 111111222222235899999999999999765332 25
Q ss_pred cHHHHHHHHHHHHhhC-CCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHhHHHHHHHH
Q 000272 271 DSDDICTAIQFIGKAR-PWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGL 349 (1744)
Q Consensus 271 ~tdDL~aaId~Lrkry-P~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly~~~L~~~L 349 (1744)
..+|+.++.+++++++ +..+++++|+|||...++.+|++.+ +.|+|+.+|-.+..+..
T Consensus 111 ~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~----~~alVL~SPf~S~~rv~----------------- 169 (258)
T KOG1552|consen 111 LYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP----LAAVVLHSPFTSGMRVA----------------- 169 (258)
T ss_pred chhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC----cceEEEeccchhhhhhh-----------------
Confidence 6789999999999999 5889999999999999999998864 77888887654432211
Q ss_pred HHHHHhhhhhhhccCCCcCHHHHhhhhcHHHHHHHHhhhccchhhHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCC
Q 000272 350 IDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPF 428 (1744)
Q Consensus 350 k~~L~r~~~lf~~~~~~~Did~vlkarTirEFDd~~tap~~Gf~sv~eYY~~aS~~~~L~~IkVPVLIIhG-DDp~VP~~ 428 (1744)
++.. -++ ..|| .....+.+..|++|+|++|| +|+++|..
T Consensus 170 ----------~~~~-----------~~~-~~~d------------------~f~~i~kI~~i~~PVLiiHgtdDevv~~s 209 (258)
T KOG1552|consen 170 ----------FPDT-----------KTT-YCFD------------------AFPNIEKISKITCPVLIIHGTDDEVVDFS 209 (258)
T ss_pred ----------ccCc-----------ceE-Eeec------------------cccccCcceeccCCEEEEecccCceeccc
Confidence 0000 000 0111 11226778999999999999 99999986
Q ss_pred ChHHHHHhcCCC-eEEEEecCCCccccCCCCchhHHHHHHHHHHHHHHHh
Q 000272 429 SIPRSSIAENPF-TSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVEL 477 (1744)
Q Consensus 429 aip~~la~~nPn-v~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~~ 477 (1744)
.... +.+..+. .+-.+..|++|+..+.. .. +...+..|+..+..
T Consensus 210 Hg~~-Lye~~k~~~epl~v~g~gH~~~~~~---~~-yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 210 HGKA-LYERCKEKVEPLWVKGAGHNDIELY---PE-YIEHLRRFISSVLP 254 (258)
T ss_pred ccHH-HHHhccccCCCcEEecCCCcccccC---HH-HHHHHHHHHHHhcc
Confidence 5432 2333333 46677888888777752 33 45678888876653
No 62
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.40 E-value=2e-11 Score=169.89 Aligned_cols=102 Identities=16% Similarity=0.194 Sum_probs=72.3
Q ss_pred CCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-------CCCCc-CcHHHHHHHHHHHHhhC
Q 000272 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTS-------RLFTA-ADSDDICTAIQFIGKAR 286 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsp-------rly~a-g~tdDL~aaId~Lrkry 286 (1744)
.+++||++||+. ++... |+.++..+. .+|+|+++|+||||.|..... ..+.. ...+|+.++++++
T Consensus 1370 ~~~~vVllHG~~-~s~~~-w~~~~~~L~-~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l---- 1442 (1655)
T PLN02980 1370 EGSVVLFLHGFL-GTGED-WIPIMKAIS-GSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI---- 1442 (1655)
T ss_pred CCCeEEEECCCC-CCHHH-HHHHHHHHh-CCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh----
Confidence 357999999985 44444 456666665 469999999999999864321 11211 1234454555443
Q ss_pred CCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCC
Q 000272 287 PWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNP 325 (1744)
Q Consensus 287 P~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP 325 (1744)
...+++++||||||.+++.++.++++ .+.+++++++.
T Consensus 1443 ~~~~v~LvGhSmGG~iAl~~A~~~P~--~V~~lVlis~~ 1479 (1655)
T PLN02980 1443 TPGKVTLVGYSMGARIALYMALRFSD--KIEGAVIISGS 1479 (1655)
T ss_pred CCCCEEEEEECHHHHHHHHHHHhChH--hhCEEEEECCC
Confidence 44689999999999999999999876 58888888754
No 63
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.40 E-value=4.9e-12 Score=129.29 Aligned_cols=143 Identities=21% Similarity=0.263 Sum_probs=104.6
Q ss_pred EEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhh-CCCCcEEEEEe
Q 000272 218 TLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKA-RPWTTLMSVGW 296 (1744)
Q Consensus 218 ~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~Lrkr-yP~spIvLVGh 296 (1744)
+||++||+. ++... +..+++.++++||.|+++|+||+|.+. ..+++.++++.+.+. ....+++++||
T Consensus 1 ~vv~~HG~~-~~~~~-~~~~~~~l~~~G~~v~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~i~l~G~ 68 (145)
T PF12695_consen 1 VVVLLHGWG-GSRRD-YQPLAEALAEQGYAVVAFDYPGHGDSD----------GADAVERVLADIRAGYPDPDRIILIGH 68 (145)
T ss_dssp EEEEECTTT-TTTHH-HHHHHHHHHHTTEEEEEESCTTSTTSH----------HSHHHHHHHHHHHHHHCTCCEEEEEEE
T ss_pred CEEEECCCC-CCHHH-HHHHHHHHHHCCCEEEEEecCCCCccc----------hhHHHHHHHHHHHhhcCCCCcEEEEEE
Confidence 589999984 44444 568899999999999999999999762 124778888876443 35579999999
Q ss_pred cHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHhHHHHHHHHHHHHHhhhhhhhccCCCcCHHHHhhhh
Q 000272 297 GYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAK 376 (1744)
Q Consensus 297 SMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly~~~L~~~Lk~~L~r~~~lf~~~~~~~Did~vlkar 376 (1744)
||||.+++.++.+. .+++++|++++..+
T Consensus 69 S~Gg~~a~~~~~~~---~~v~~~v~~~~~~~------------------------------------------------- 96 (145)
T PF12695_consen 69 SMGGAIAANLAARN---PRVKAVVLLSPYPD------------------------------------------------- 96 (145)
T ss_dssp THHHHHHHHHHHHS---TTESEEEEESESSG-------------------------------------------------
T ss_pred ccCcHHHHHHhhhc---cceeEEEEecCccc-------------------------------------------------
Confidence 99999999999875 36999999877200
Q ss_pred cHHHHHHHHhhhccchhhHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCcc
Q 000272 377 SVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSS 452 (1744)
Q Consensus 377 TirEFDd~~tap~~Gf~sv~eYY~~aS~~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~ 452 (1744)
...+..+++|+++++| +|+++|+............+.++.++++++|+
T Consensus 97 ----------------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 ----------------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp ----------------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred ----------------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 0012234459999999 99999876554322223357899999999995
No 64
>PRK11071 esterase YqiA; Provisional
Probab=99.39 E-value=5.4e-12 Score=138.86 Aligned_cols=91 Identities=14% Similarity=0.004 Sum_probs=65.9
Q ss_pred cEEEEEcCCCCCchhHHH-HHHHHHHHh--CCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEE
Q 000272 217 TTLLLVPGTAEGSIEKRI-RLFVCEALR--RGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMS 293 (1744)
Q Consensus 217 P~VVLLHGltGGS~~sYI-r~La~~La~--~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIvL 293 (1744)
|+||++||+. ++...+- ..+...+.+ .+|+|+++|+|||+ +++.+.+..+.++++..++++
T Consensus 2 p~illlHGf~-ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~---------------~~~~~~l~~l~~~~~~~~~~l 65 (190)
T PRK11071 2 STLLYLHGFN-SSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP---------------ADAAELLESLVLEHGGDPLGL 65 (190)
T ss_pred CeEEEECCCC-CCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH---------------HHHHHHHHHHHHHcCCCCeEE
Confidence 5799999985 4555443 344555554 37999999999984 234444454444556678999
Q ss_pred EEecHHHHHHHHHHHHhCCCCCceEEEEecCCCCh
Q 000272 294 VGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDL 328 (1744)
Q Consensus 294 VGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl 328 (1744)
+||||||.+++.++.+++. .+++++++.+.
T Consensus 66 vG~S~Gg~~a~~~a~~~~~-----~~vl~~~~~~~ 95 (190)
T PRK11071 66 VGSSLGGYYATWLSQCFML-----PAVVVNPAVRP 95 (190)
T ss_pred EEECHHHHHHHHHHHHcCC-----CEEEECCCCCH
Confidence 9999999999999998762 35778887763
No 65
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.35 E-value=1.2e-11 Score=143.09 Aligned_cols=131 Identities=14% Similarity=0.131 Sum_probs=93.3
Q ss_pred EEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCch--hHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCC
Q 000272 190 CVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSI--EKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLF 267 (1744)
Q Consensus 190 ~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~--~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly 267 (1744)
+++.++|..+.+ |+.+. .....++||++||+.+... ...++.++..|.++||+|+++|+||||.|........
T Consensus 4 ~l~~~~g~~~~~-~~~p~----~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~ 78 (266)
T TIGR03101 4 FLDAPHGFRFCL-YHPPV----AVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAAR 78 (266)
T ss_pred EecCCCCcEEEE-EecCC----CCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCC
Confidence 455666665543 33332 1223578999999843211 1235667889999999999999999999864322211
Q ss_pred CcCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCCh
Q 000272 268 TAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDL 328 (1744)
Q Consensus 268 ~ag~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl 328 (1744)
...+.+|+..+++++++. +..+++++||||||.+++.++.++++ .+.++|++++....
T Consensus 79 ~~~~~~Dv~~ai~~L~~~-~~~~v~LvG~SmGG~vAl~~A~~~p~--~v~~lVL~~P~~~g 136 (266)
T TIGR03101 79 WDVWKEDVAAAYRWLIEQ-GHPPVTLWGLRLGALLALDAANPLAA--KCNRLVLWQPVVSG 136 (266)
T ss_pred HHHHHHHHHHHHHHHHhc-CCCCEEEEEECHHHHHHHHHHHhCcc--ccceEEEeccccch
Confidence 123569999999999875 45799999999999999999988764 57888888776553
No 66
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.32 E-value=1.7e-11 Score=153.44 Aligned_cols=109 Identities=19% Similarity=0.256 Sum_probs=82.2
Q ss_pred CCcEEEEEcCCCCCchhHHH------HHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcH-HHHHHHHHHHHhhCC
Q 000272 215 LDTTLLLVPGTAEGSIEKRI------RLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADS-DDICTAIQFIGKARP 287 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sYI------r~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~t-dDL~aaId~LrkryP 287 (1744)
..++|||+||+.. ..|+ +.++.+|.++||+|+++|+||+|.+..... + ..+. +++.++|+++++..+
T Consensus 187 ~~~PlLiVp~~i~---k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~--~-ddY~~~~i~~al~~v~~~~g 260 (532)
T TIGR01838 187 HKTPLLIVPPWIN---KYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKT--F-DDYIRDGVIAALEVVEAITG 260 (532)
T ss_pred CCCcEEEECcccc---cceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCC--h-hhhHHHHHHHHHHHHHHhcC
Confidence 4688999999743 3443 369999999999999999999997742211 1 1233 568899999988888
Q ss_pred CCcEEEEEecHHHHHHHH----HHHHhCCCCCceEEEEecCCCChhh
Q 000272 288 WTTLMSVGWGYGANMLTK----YLAEVGERTPLTAVTCIDNPFDLEE 330 (1744)
Q Consensus 288 ~spIvLVGhSMGG~IaL~----YLae~ge~s~L~AaVlISpP~Dl~e 330 (1744)
..+++++||||||.++.. |++.. ...++.++++++++.|+..
T Consensus 261 ~~kv~lvG~cmGGtl~a~ala~~aa~~-~~~rv~slvll~t~~Df~~ 306 (532)
T TIGR01838 261 EKQVNCVGYCIGGTLLSTALAYLAARG-DDKRIKSATFFTTLLDFSD 306 (532)
T ss_pred CCCeEEEEECcCcHHHHHHHHHHHHhC-CCCccceEEEEecCcCCCC
Confidence 889999999999998633 34433 2236899999999998764
No 67
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.31 E-value=6.8e-11 Score=143.61 Aligned_cols=130 Identities=11% Similarity=0.057 Sum_probs=83.8
Q ss_pred EEcCCCcE-----EEEEecCCCccccccCCCcEEEEEcCCCCCchh-----------HHHHHHHH---HHHhCCcEEEEE
Q 000272 191 VNTEDGGV-----ISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIE-----------KRIRLFVC---EALRRGFFPVVM 251 (1744)
Q Consensus 191 L~t~DGG~-----IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~-----------sYIr~La~---~La~~GYrVVVf 251 (1744)
|++..|++ ++|..+...+ ....++||++|+++|.++. .||..++- .+--.-|.||++
T Consensus 30 f~l~~G~~l~~~~~~Y~t~G~ln----~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~ 105 (389)
T PRK06765 30 FTTEGGRTIPDVQMGYETYGTLN----RAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVIST 105 (389)
T ss_pred EEccCCCCcCCceEEEEeccccC----CCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEe
Confidence 66666654 4555444321 1245899999999875532 24544442 122345999999
Q ss_pred cCCCCCCC--C-----------CCCCCCC----CcCcHHHHHHHHHHHHhhCCCCcEE-EEEecHHHHHHHHHHHHhCCC
Q 000272 252 NPRGCGGS--P-----------LTTSRLF----TAADSDDICTAIQFIGKARPWTTLM-SVGWGYGANMLTKYLAEVGER 313 (1744)
Q Consensus 252 D~RGhGgS--p-----------ltsprly----~ag~tdDL~aaId~LrkryP~spIv-LVGhSMGG~IaL~YLae~ge~ 313 (1744)
|.-|-|.| | ..+++.| ..-..+|+.+.+..+.++.+..++. ++||||||++++.++.++|+
T Consensus 106 n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~- 184 (389)
T PRK06765 106 DTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPH- 184 (389)
T ss_pred cccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChH-
Confidence 99987642 1 0111111 1123566666666555666767776 99999999999999999987
Q ss_pred CCceEEEEecCCC
Q 000272 314 TPLTAVTCIDNPF 326 (1744)
Q Consensus 314 s~L~AaVlISpP~ 326 (1744)
.+.++|++++..
T Consensus 185 -~v~~lv~ia~~~ 196 (389)
T PRK06765 185 -MVERMIGVIGNP 196 (389)
T ss_pred -hhheEEEEecCC
Confidence 588888887554
No 68
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.27 E-value=1.4e-11 Score=134.14 Aligned_cols=227 Identities=15% Similarity=0.152 Sum_probs=135.5
Q ss_pred cEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcC-cHHHHHHHHHHHHhhCCCCcEEEEE
Q 000272 217 TTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAA-DSDDICTAIQFIGKARPWTTLMSVG 295 (1744)
Q Consensus 217 P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag-~tdDL~aaId~LrkryP~spIvLVG 295 (1744)
..|++++|..|++.+.|--.+....-..-+.+|++|.||+|.|..+. |-+... ..+|...+++-++.. ...|+.++|
T Consensus 43 ~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~-Rkf~~~ff~~Da~~avdLM~aL-k~~~fsvlG 120 (277)
T KOG2984|consen 43 NYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPE-RKFEVQFFMKDAEYAVDLMEAL-KLEPFSVLG 120 (277)
T ss_pred ceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCc-ccchHHHHHHhHHHHHHHHHHh-CCCCeeEee
Confidence 46999999887766665333333333334999999999999985443 333332 346777777665542 346899999
Q ss_pred ecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHhHHHHHHHHHHHHHhhhhhhhccCCCcCHHHHhhh
Q 000272 296 WGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSA 375 (1744)
Q Consensus 296 hSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly~~~L~~~Lk~~L~r~~~lf~~~~~~~Did~vlka 375 (1744)
||-||..++..|+++++ .+...++.++...+..... ...++++..-+ .... .+ . .+++....
T Consensus 121 WSdGgiTalivAak~~e--~v~rmiiwga~ayvn~~~~----------ma~kgiRdv~k-Ws~r--~R-~--P~e~~Yg~ 182 (277)
T KOG2984|consen 121 WSDGGITALIVAAKGKE--KVNRMIIWGAAAYVNHLGA----------MAFKGIRDVNK-WSAR--GR-Q--PYEDHYGP 182 (277)
T ss_pred ecCCCeEEEEeeccChh--hhhhheeecccceecchhH----------HHHhchHHHhh-hhhh--hc-c--hHHHhcCH
Confidence 99999999999988765 4556666544332221110 00111111100 0000 00 0 01111111
Q ss_pred hcHHH-HHHHHhhhccchhhHHHHHhhc---CcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCC
Q 000272 376 KSVRD-FEKAISMVSYGFEAIEDFYSKS---STRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLP 450 (1744)
Q Consensus 376 rTirE-FDd~~tap~~Gf~sv~eYY~~a---S~~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la~~nPnv~LvLt~gGH 450 (1744)
.+++. |...+ ..++.||... -|+..+.+|+||+|++|| .||+++...++.. ....+.+++.+.+.|+
T Consensus 183 e~f~~~wa~wv-------D~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi-~~~~~~a~~~~~peGk 254 (277)
T KOG2984|consen 183 ETFRTQWAAWV-------DVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFI-PVLKSLAKVEIHPEGK 254 (277)
T ss_pred HHHHHHHHHHH-------HHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccch-hhhcccceEEEccCCC
Confidence 11111 11111 0122222221 256789999999999999 9999997666543 3456889999999888
Q ss_pred ccccCCCCchhHHHHHHHHHHHHH
Q 000272 451 SSVIGGGRAAESWCQNLVIEWLSA 474 (1744)
Q Consensus 451 H~gF~e~~~~~sWv~r~VlEFL~a 474 (1744)
|-+... -..|+++.+.+||+.
T Consensus 255 Hn~hLr---ya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 255 HNFHLR---YAKEFNKLVLDFLKS 275 (277)
T ss_pred cceeee---chHHHHHHHHHHHhc
Confidence 877664 356899999999974
No 69
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.27 E-value=1e-10 Score=156.93 Aligned_cols=252 Identities=15% Similarity=0.141 Sum_probs=132.0
Q ss_pred CCcEEEEEcCCCCCchhHHH----HHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHH---HHHHHHHHhhCC
Q 000272 215 LDTTLLLVPGTAEGSIEKRI----RLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDI---CTAIQFIGKARP 287 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sYI----r~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL---~aaId~LrkryP 287 (1744)
.+++|||+||+.. +...|- +.++..|.++||+|+++|+ |.+... ...+.....+++ .++++.++...
T Consensus 66 ~~~plllvhg~~~-~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~-~~~~~~~l~~~i~~l~~~l~~v~~~~- 139 (994)
T PRK07868 66 VGPPVLMVHPMMM-SADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKV-EGGMERNLADHVVALSEAIDTVKDVT- 139 (994)
T ss_pred CCCcEEEECCCCC-CccceecCCcccHHHHHHHCCCEEEEEcC---CCCChh-HcCccCCHHHHHHHHHHHHHHHHHhh-
Confidence 4689999999843 332221 1247889999999999996 433221 111222223444 44444444333
Q ss_pred CCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhc-cCchh-----------HHhH-----HH------
Q 000272 288 WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATR-SSPHH-----------IALD-----EK------ 344 (1744)
Q Consensus 288 ~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~-slp~~-----------~ly~-----~~------ 344 (1744)
..+++++||||||.+++.|++.+++ .++.+++++++|+|+..... .++.. .+.. ..
T Consensus 140 ~~~v~lvG~s~GG~~a~~~aa~~~~-~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 218 (994)
T PRK07868 140 GRDVHLVGYSQGGMFCYQAAAYRRS-KDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGF 218 (994)
T ss_pred CCceEEEEEChhHHHHHHHHHhcCC-CccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHH
Confidence 3589999999999999999986543 36899999999987643211 00000 0000 00
Q ss_pred -HHHHHHHHHHhhhhhhhccCCCcCHHHHhhhhcHHHHHHHHhh-hccc--hhh-HHHHHhhcCc----------chhcC
Q 000272 345 -LANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISM-VSYG--FEA-IEDFYSKSST----------RSVVG 409 (1744)
Q Consensus 345 -L~~~Lk~~L~r~~~lf~~~~~~~Did~vlkarTirEFDd~~ta-p~~G--f~s-v~eYY~~aS~----------~~~L~ 409 (1744)
+...+. .+.....++... .+.+.+......+.|-..... ...| +.. ...+|..... ...+.
T Consensus 219 ~~l~p~~-~~~~~~~~~~~l---~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~ 294 (994)
T PRK07868 219 QMLDPVK-TAKARVDFLRQL---HDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLA 294 (994)
T ss_pred HhcChhH-HHHHHHHHHHhc---CchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchh
Confidence 000000 011111111110 011111100111111111000 0001 111 2333322111 12589
Q ss_pred cCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEE-EEecCCCccccCCCCchhHHHHHHHHHHHHHHHhh
Q 000272 410 NIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSL-LLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVELG 478 (1744)
Q Consensus 410 ~IkVPVLIIhG-DDp~VP~~aip~~la~~nPnv~L-vLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~~~ 478 (1744)
+|++|+|+|+| +|+++|+.+... .....|+..+ .+++++||.++..+.....-+...+.+||...+..
T Consensus 295 ~i~~P~L~i~G~~D~ivp~~~~~~-l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~~ 364 (994)
T PRK07868 295 DITCPVLAFVGEVDDIGQPASVRG-IRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEGD 364 (994)
T ss_pred hCCCCEEEEEeCCCCCCCHHHHHH-HHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhccC
Confidence 99999999999 999999865543 3456788877 56666666655544433332338899999876643
No 70
>PRK10115 protease 2; Provisional
Probab=99.26 E-value=2.7e-10 Score=147.34 Aligned_cols=222 Identities=16% Similarity=0.136 Sum_probs=149.6
Q ss_pred ceEEEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC-
Q 000272 185 EYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTT- 263 (1744)
Q Consensus 185 ~YeRe~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSplts- 263 (1744)
..++..++..||..|.+.+..+++.. ..+..|+||++||..+.+....+......++++||.|+..|.||.|+-...-
T Consensus 415 ~~e~v~~~s~DG~~Ip~~l~~~~~~~-~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~ 493 (686)
T PRK10115 415 RSEHLWITARDGVEVPVSLVYHRKHF-RKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWY 493 (686)
T ss_pred EEEEEEEECCCCCEEEEEEEEECCCC-CCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHH
Confidence 44666688899999887544432211 2345699999999887776665555667889999999999999988753211
Q ss_pred ---CCCCCcCcHHHHHHHHHHHHhhC--CCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhc--cCc
Q 000272 264 ---SRLFTAADSDDICTAIQFIGKAR--PWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATR--SSP 336 (1744)
Q Consensus 264 ---prly~ag~tdDL~aaId~Lrkry--P~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~--slp 336 (1744)
....-....+|+.++++|+.++. ...++.+.|.|.||.++...+.++|+ .++|+|+..+..|+...+. .++
T Consensus 494 ~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pd--lf~A~v~~vp~~D~~~~~~~~~~p 571 (686)
T PRK10115 494 EDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPE--LFHGVIAQVPFVDVVTTMLDESIP 571 (686)
T ss_pred HhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChh--heeEEEecCCchhHhhhcccCCCC
Confidence 11111245799999999997763 13589999999999999988888776 6899999888888764321 111
Q ss_pred hhHHhHHHHHHHHHHHHHhhhhhhhccCCCcCHHHHhhhhcHHHHHHHHhhhccchh---hHHHHHhhcCcchhcCcCCc
Q 000272 337 HHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFE---AIEDFYSKSSTRSVVGNIKI 413 (1744)
Q Consensus 337 ~~~ly~~~L~~~Lk~~L~r~~~lf~~~~~~~Did~vlkarTirEFDd~~tap~~Gf~---sv~eYY~~aS~~~~L~~IkV 413 (1744)
. +..++++ +|.. ...+|+...||.+.+.+++.
T Consensus 572 ~---------------------------------------~~~~~~e------~G~p~~~~~~~~l~~~SP~~~v~~~~~ 606 (686)
T PRK10115 572 L---------------------------------------TTGEFEE------WGNPQDPQYYEYMKSYSPYDNVTAQAY 606 (686)
T ss_pred C---------------------------------------ChhHHHH------hCCCCCHHHHHHHHHcCchhccCccCC
Confidence 0 0001111 1211 23456777899999999999
Q ss_pred c-EEEEEe-CCCCCCCCChHH---HHHhcCCCeEEEEe---cCCCcccc
Q 000272 414 P-VLFIQN-DAGAVPPFSIPR---SSIAENPFTSLLLC---SCLPSSVI 454 (1744)
Q Consensus 414 P-VLIIhG-DDp~VP~~aip~---~la~~nPnv~LvLt---~gGHH~gF 454 (1744)
| +|+++| +|+.||+..... .+......+.++++ +++||.+-
T Consensus 607 P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~ 655 (686)
T PRK10115 607 PHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGK 655 (686)
T ss_pred CceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCC
Confidence 9 567799 999998754321 22222334455565 78888633
No 71
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.24 E-value=1.3e-10 Score=126.78 Aligned_cols=175 Identities=17% Similarity=0.218 Sum_probs=126.5
Q ss_pred CCCcEEEEEc--CCCCCchhH-HHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCc
Q 000272 214 GLDTTLLLVP--GTAEGSIEK-RIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTT 290 (1744)
Q Consensus 214 g~~P~VVLLH--GltGGS~~s-YIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~sp 290 (1744)
...|+.|+|| .+.||++.. -+..++..|.++||.|+.||+||.|+|... .....+..+|..++++|++.++|..+
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~--fD~GiGE~~Da~aaldW~~~~hp~s~ 103 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGE--FDNGIGELEDAAAALDWLQARHPDSA 103 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCc--ccCCcchHHHHHHHHHHHHhhCCCch
Confidence 3467888887 345666655 467888899999999999999999999754 23346789999999999999999888
Q ss_pred E-EEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHhHHHHHHHHHHHHHhhhhhhhccCCCcCH
Q 000272 291 L-MSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRAKGFDV 369 (1744)
Q Consensus 291 I-vLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly~~~L~~~Lk~~L~r~~~lf~~~~~~~Di 369 (1744)
. .+.|||+|+.|++..|.+.++ ....+.++++.+. +
T Consensus 104 ~~~l~GfSFGa~Ia~~la~r~~e---~~~~is~~p~~~~---~------------------------------------- 140 (210)
T COG2945 104 SCWLAGFSFGAYIAMQLAMRRPE---ILVFISILPPINA---Y------------------------------------- 140 (210)
T ss_pred hhhhcccchHHHHHHHHHHhccc---ccceeeccCCCCc---h-------------------------------------
Confidence 7 789999999999999988765 3344445444331 0
Q ss_pred HHHhhhhcHHHHHHHHhhhccchhhHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecC
Q 000272 370 EKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSC 448 (1744)
Q Consensus 370 d~vlkarTirEFDd~~tap~~Gf~sv~eYY~~aS~~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la~~nPnv~LvLt~g 448 (1744)
++ ..+..+.+|.|+|+| .|+++++... .. ..+.....++..++
T Consensus 141 ---------------------------df-------s~l~P~P~~~lvi~g~~Ddvv~l~~~-l~-~~~~~~~~~i~i~~ 184 (210)
T COG2945 141 ---------------------------DF-------SFLAPCPSPGLVIQGDADDVVDLVAV-LK-WQESIKITVITIPG 184 (210)
T ss_pred ---------------------------hh-------hhccCCCCCceeEecChhhhhcHHHH-HH-hhcCCCCceEEecC
Confidence 00 123455689999999 8888876432 22 23335567788889
Q ss_pred CCccccCCCCchhHHHHHHHHHHHH
Q 000272 449 LPSSVIGGGRAAESWCQNLVIEWLS 473 (1744)
Q Consensus 449 GHH~gF~e~~~~~sWv~r~VlEFL~ 473 (1744)
..|.+... ...+.+.+.+|+.
T Consensus 185 a~HFF~gK----l~~l~~~i~~~l~ 205 (210)
T COG2945 185 ADHFFHGK----LIELRDTIADFLE 205 (210)
T ss_pred CCceeccc----HHHHHHHHHHHhh
Confidence 88855553 2345678888885
No 72
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.23 E-value=8.8e-11 Score=129.10 Aligned_cols=230 Identities=16% Similarity=0.184 Sum_probs=148.6
Q ss_pred cCCcceEEEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCC
Q 000272 181 EGKLEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSP 260 (1744)
Q Consensus 181 ~p~V~YeRe~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSp 260 (1744)
...++|+|..+.++|..++...|... ....|+++++||-+ |++...+...--.....+..|+.+++||+|.|.
T Consensus 49 ~~n~pye~i~l~T~D~vtL~a~~~~~------E~S~pTlLyfh~NA-GNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~ 121 (300)
T KOG4391|consen 49 EFNMPYERIELRTRDKVTLDAYLMLS------ESSRPTLLYFHANA-GNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSE 121 (300)
T ss_pred ccCCCceEEEEEcCcceeEeeeeecc------cCCCceEEEEccCC-CcccchhhHHHHHHHHcCceEEEEEeeccccCC
Confidence 45689999999999998887666653 12579999999974 455443322223445678999999999999986
Q ss_pred CCCCCCCCcCcHHHHHHHHHHHHhhC--CCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCC-hhhhhccCch
Q 000272 261 LTTSRLFTAADSDDICTAIQFIGKAR--PWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFD-LEEATRSSPH 337 (1744)
Q Consensus 261 ltsprly~ag~tdDL~aaId~Lrkry--P~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~D-l~es~~slp~ 337 (1744)
+. ....+..-|-+++|+|+..+. ...++++.|-|+||.+++..+++..+ ++.|+++ .+.|. .......+
T Consensus 122 Gs---psE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~--ri~~~iv-ENTF~SIp~~~i~~-- 193 (300)
T KOG4391|consen 122 GS---PSEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD--RISAIIV-ENTFLSIPHMAIPL-- 193 (300)
T ss_pred CC---ccccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchh--heeeeee-echhccchhhhhhe--
Confidence 43 233455679999999998764 35689999999999999988887643 4555543 33332 21111100
Q ss_pred hHHhHHHHHHHHHHHHHhhhhhhhccCCCcCHHHHhhhhcHHHHHHHHhhhccchhhHHHHHhhcCcchhcCcCCccEEE
Q 000272 338 HIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLF 417 (1744)
Q Consensus 338 ~~ly~~~L~~~Lk~~L~r~~~lf~~~~~~~Did~vlkarTirEFDd~~tap~~Gf~sv~eYY~~aS~~~~L~~IkVPVLI 417 (1744)
.|+ +-. +.+. ..+ |.+ .....+.+...+.|.|+
T Consensus 194 ---------------------v~p-----~~~------k~i~---~lc------~kn------~~~S~~ki~~~~~P~LF 226 (300)
T KOG4391|consen 194 ---------------------VFP-----FPM------KYIP---LLC------YKN------KWLSYRKIGQCRMPFLF 226 (300)
T ss_pred ---------------------ecc-----chh------hHHH---HHH------HHh------hhcchhhhccccCceEE
Confidence 000 000 0000 000 100 01223456678899999
Q ss_pred EEe-CCCCCCCCChHHHHHhcC--CCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHHHh
Q 000272 418 IQN-DAGAVPPFSIPRSSIAEN--PFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVEL 477 (1744)
Q Consensus 418 IhG-DDp~VP~~aip~~la~~n--Pnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~~ 477 (1744)
|.| .|.+|||..... +...+ ...++..+|+|.|..-+-. .. +.+.+.+||.++..
T Consensus 227 iSGlkDelVPP~~Mr~-Ly~~c~S~~Krl~eFP~gtHNDT~i~--dG--Yfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 227 ISGLKDELVPPVMMRQ-LYELCPSRTKRLAEFPDGTHNDTWIC--DG--YFQAIEDFLAEVVK 284 (300)
T ss_pred eecCccccCCcHHHHH-HHHhCchhhhhheeCCCCccCceEEe--cc--HHHHHHHHHHHhcc
Confidence 999 999999876643 23444 4567888998888644421 22 34799999987765
No 73
>PLN00021 chlorophyllase
Probab=99.22 E-value=3.3e-10 Score=134.16 Aligned_cols=115 Identities=15% Similarity=0.113 Sum_probs=81.0
Q ss_pred EEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHH
Q 000272 199 ISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTA 278 (1744)
Q Consensus 199 IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aa 278 (1744)
+.++++.|. ..+..|+||++||+.+ ... ++..++.+++++||.|+++|++|++... .....+|..++
T Consensus 39 ~p~~v~~P~----~~g~~PvVv~lHG~~~-~~~-~y~~l~~~Las~G~~VvapD~~g~~~~~-------~~~~i~d~~~~ 105 (313)
T PLN00021 39 KPLLVATPS----EAGTYPVLLFLHGYLL-YNS-FYSQLLQHIASHGFIVVAPQLYTLAGPD-------GTDEIKDAAAV 105 (313)
T ss_pred ceEEEEeCC----CCCCCCEEEEECCCCC-Ccc-cHHHHHHHHHhCCCEEEEecCCCcCCCC-------chhhHHHHHHH
Confidence 445555542 2345799999999843 433 4567888999999999999999975421 12234677777
Q ss_pred HHHHHhhC----------CCCcEEEEEecHHHHHHHHHHHHhCCC---CCceEEEEecCCC
Q 000272 279 IQFIGKAR----------PWTTLMSVGWGYGANMLTKYLAEVGER---TPLTAVTCIDNPF 326 (1744)
Q Consensus 279 Id~Lrkry----------P~spIvLVGhSMGG~IaL~YLae~ge~---s~L~AaVlISpP~ 326 (1744)
++++.... ...+++++||||||.+++.++.++++. .++.+++++.+..
T Consensus 106 ~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 106 INWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred HHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 77776521 125799999999999999999887643 2577777776543
No 74
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.21 E-value=1e-10 Score=129.95 Aligned_cols=183 Identities=13% Similarity=0.149 Sum_probs=114.6
Q ss_pred CCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCC-CCCCCCC---CCC-------cCcHHHHHHHHHHH
Q 000272 214 GLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGG-SPLTTSR---LFT-------AADSDDICTAIQFI 282 (1744)
Q Consensus 214 g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGg-Spltspr---ly~-------ag~tdDL~aaId~L 282 (1744)
+..|.||++|++.| - ..+++.++..++++||.|+++|+-+-.. .+..... .+. .....|+.++++++
T Consensus 12 ~~~~~Vvv~~d~~G-~-~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l 89 (218)
T PF01738_consen 12 GPRPAVVVIHDIFG-L-NPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYL 89 (218)
T ss_dssp SSEEEEEEE-BTTB-S--HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCC-C-chHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 35789999999854 2 3678899999999999999999754433 1111111 110 01247888999999
Q ss_pred HhhC--CCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHhHHHHHHHHHHHHHhhhhhh
Q 000272 283 GKAR--PWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELF 360 (1744)
Q Consensus 283 rkry--P~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly~~~L~~~Lk~~L~r~~~lf 360 (1744)
+.+. ...++.++|||+||.+++.++.+. ..+.++++..++....
T Consensus 90 ~~~~~~~~~kig~vGfc~GG~~a~~~a~~~---~~~~a~v~~yg~~~~~------------------------------- 135 (218)
T PF01738_consen 90 RAQPEVDPGKIGVVGFCWGGKLALLLAARD---PRVDAAVSFYGGSPPP------------------------------- 135 (218)
T ss_dssp HCTTTCEEEEEEEEEETHHHHHHHHHHCCT---TTSSEEEEES-SSSGG-------------------------------
T ss_pred HhccccCCCcEEEEEEecchHHhhhhhhhc---cccceEEEEcCCCCCC-------------------------------
Confidence 8875 356999999999999999887654 2588888775510000
Q ss_pred hccCCCcCHHHHhhhhcHHHHHHHHhhhccchhhHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCCh---HHHHHh
Q 000272 361 KGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSI---PRSSIA 436 (1744)
Q Consensus 361 ~~~~~~~Did~vlkarTirEFDd~~tap~~Gf~sv~eYY~~aS~~~~L~~IkVPVLIIhG-DDp~VP~~ai---p~~la~ 436 (1744)
.......++++|+|+++| +|+.+|.+.. ...+..
T Consensus 136 ------------------------------------------~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~ 173 (218)
T PF01738_consen 136 ------------------------------------------PPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKA 173 (218)
T ss_dssp ------------------------------------------GHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHC
T ss_pred ------------------------------------------cchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHh
Confidence 001124467899999999 9999987643 223334
Q ss_pred cCCCeEEEEecCCCccccCCCCc-----hhHHHHHHHHHHHHH
Q 000272 437 ENPFTSLLLCSCLPSSVIGGGRA-----AESWCQNLVIEWLSA 474 (1744)
Q Consensus 437 ~nPnv~LvLt~gGHH~gF~e~~~-----~~sWv~r~VlEFL~a 474 (1744)
....+++.++++.+|+++..... ...-..+.+.+||++
T Consensus 174 ~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~ 216 (218)
T PF01738_consen 174 AGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKR 216 (218)
T ss_dssp TTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC
T ss_pred cCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHh
Confidence 56789999999999988876543 111223677778764
No 75
>PLN02442 S-formylglutathione hydrolase
Probab=99.18 E-value=1.4e-09 Score=126.64 Aligned_cols=190 Identities=12% Similarity=0.033 Sum_probs=109.5
Q ss_pred CCcEEEEEcCCCCCchhHHH--HHHHHHHHhCCcEEEEEcCCCCCCC-CCC--------CCCCCC---------cC----
Q 000272 215 LDTTLLLVPGTAEGSIEKRI--RLFVCEALRRGFFPVVMNPRGCGGS-PLT--------TSRLFT---------AA---- 270 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sYI--r~La~~La~~GYrVVVfD~RGhGgS-plt--------sprly~---------ag---- 270 (1744)
..|+|+++||+. ++...+. ..+...+...||.||++|.+++|.- ... ....|. ..
T Consensus 46 ~~Pvv~~lHG~~-~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (283)
T PLN02442 46 KVPVLYWLSGLT-CTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDY 124 (283)
T ss_pred CCCEEEEecCCC-cChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhh
Confidence 568999999975 4444442 2244566778999999998776610 000 000010 01
Q ss_pred cHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHhHHHHHHHHH
Q 000272 271 DSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLI 350 (1744)
Q Consensus 271 ~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly~~~L~~~Lk 350 (1744)
..+++...++.........+++++||||||.+++.++.++++ .+.+++++++..+..... +. ...
T Consensus 125 ~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~--~~~~~~~~~~~~~~~~~~----~~-------~~~-- 189 (283)
T PLN02442 125 VVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPD--KYKSVSAFAPIANPINCP----WG-------QKA-- 189 (283)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCch--hEEEEEEECCccCcccCc----hh-------hHH--
Confidence 124444444443222344689999999999999999998875 578888888876643110 00 000
Q ss_pred HHHHhhhhhhhccCCCcCHHHHhhhhcHHHHHHHHhhhccchhhHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCC-
Q 000272 351 DILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPF- 428 (1744)
Q Consensus 351 ~~L~r~~~lf~~~~~~~Did~vlkarTirEFDd~~tap~~Gf~sv~eYY~~aS~~~~L~~IkVPVLIIhG-DDp~VP~~- 428 (1744)
+.. .+.. +. ..+ . -|...++...+..+++|+|++|| +|+++|..
T Consensus 190 --~~~---~~g~-----~~---------~~~--------------~-~~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~ 235 (283)
T PLN02442 190 --FTN---YLGS-----DK---------ADW--------------E-EYDATELVSKFNDVSATILIDQGEADKFLKEQL 235 (283)
T ss_pred --HHH---HcCC-----Ch---------hhH--------------H-HcChhhhhhhccccCCCEEEEECCCCccccccc
Confidence 000 0100 00 000 0 01222334455667899999999 89898863
Q ss_pred -C--hHHHHHhcCCCeEEEEecCCCcccc
Q 000272 429 -S--IPRSSIAENPFTSLLLCSCLPSSVI 454 (1744)
Q Consensus 429 -a--ip~~la~~nPnv~LvLt~gGHH~gF 454 (1744)
+ +.....+...++++.++++++|.+.
T Consensus 236 ~s~~~~~~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 236 LPENFEEACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred cHHHHHHHHHHcCCCeEEEEeCCCCccHH
Confidence 1 1122223445688999999888644
No 76
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.17 E-value=2.6e-10 Score=131.59 Aligned_cols=130 Identities=22% Similarity=0.228 Sum_probs=89.3
Q ss_pred CCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHH-HH-HHH------HHHHhCCcEEEEEcCCCCCCCCCCCCCC
Q 000272 195 DGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKR-IR-LFV------CEALRRGFFPVVMNPRGCGGSPLTTSRL 266 (1744)
Q Consensus 195 DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sY-Ir-~La------~~La~~GYrVVVfD~RGhGgSpltsprl 266 (1744)
||..|+.|.+.| . ....+.-|+||..|+...+..... .. ... ..++++||.||+.|.||+|.|.......
T Consensus 1 DGv~L~adv~~P-~-~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~ 78 (272)
T PF02129_consen 1 DGVRLAADVYRP-G-ADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM 78 (272)
T ss_dssp TS-EEEEEEEEE----TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT
T ss_pred CCCEEEEEEEec-C-CCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC
Confidence 889999998776 1 123455788999999743221111 11 111 1289999999999999999997553222
Q ss_pred CCcCcHHHHHHHHHHHHhhCCC--CcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhh
Q 000272 267 FTAADSDDICTAIQFIGKARPW--TTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEE 330 (1744)
Q Consensus 267 y~ag~tdDL~aaId~LrkryP~--spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~e 330 (1744)
.....+|..++|+++..+ |. .++.++|.|++|...+..|+..+. .|+|++..++..|+..
T Consensus 79 -~~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p--~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 79 -SPNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPP--HLKAIVPQSGWSDLYR 140 (272)
T ss_dssp -SHHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-T--TEEEEEEESE-SBTCC
T ss_pred -ChhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCC--CceEEEecccCCcccc
Confidence 344679999999999887 64 489999999999998888875443 6999999988888875
No 77
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.15 E-value=8.6e-10 Score=133.32 Aligned_cols=233 Identities=16% Similarity=0.117 Sum_probs=126.3
Q ss_pred CcceEEEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q 000272 183 KLEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLT 262 (1744)
Q Consensus 183 ~V~YeRe~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSplt 262 (1744)
+.+.++..|+.++ +.|..-...|. ..+..|+||++.|+ .+-.+.+++.+..++..+|+.++++|.||.|.|+..
T Consensus 162 ~~~i~~v~iP~eg-~~I~g~LhlP~----~~~p~P~VIv~gGl-Ds~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~ 235 (411)
T PF06500_consen 162 DYPIEEVEIPFEG-KTIPGYLHLPS----GEKPYPTVIVCGGL-DSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKW 235 (411)
T ss_dssp SSEEEEEEEEETT-CEEEEEEEESS----SSS-EEEEEEE--T-TS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT
T ss_pred CCCcEEEEEeeCC-cEEEEEEEcCC----CCCCCCEEEEeCCc-chhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccC
Confidence 3445777788866 56654333332 23345777777775 666667776677789999999999999999988522
Q ss_pred CCCCCCcCcHHHHHHHHHHHHhhC--CCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhh-cc-Cchh
Q 000272 263 TSRLFTAADSDDICTAIQFIGKAR--PWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEAT-RS-SPHH 338 (1744)
Q Consensus 263 sprly~ag~tdDL~aaId~Lrkry--P~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~-~s-lp~~ 338 (1744)
. +......=..++++|+...- ...+|.++|+|+||+++++.+.-+.. +|+|+|+.+++.+-.-+. .. ....
T Consensus 236 ~---l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~--RlkavV~~Ga~vh~~ft~~~~~~~~P 310 (411)
T PF06500_consen 236 P---LTQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDP--RLKAVVALGAPVHHFFTDPEWQQRVP 310 (411)
T ss_dssp ----S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTT--T-SEEEEES---SCGGH-HHHHTTS-
T ss_pred C---CCcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhccc--ceeeEeeeCchHhhhhccHHHHhcCC
Confidence 1 11111133568889987642 24599999999999999999876433 799999999885433211 00 0000
Q ss_pred HHhHHHHHHHHHHHHHhhhhhhhccCCCcCHHHHhhhhcHHHHHHHHhhhccchh--hHHHHH---hhcCcc--hhc--C
Q 000272 339 IALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFE--AIEDFY---SKSSTR--SVV--G 409 (1744)
Q Consensus 339 ~ly~~~L~~~Lk~~L~r~~~lf~~~~~~~Did~vlkarTirEFDd~~tap~~Gf~--sv~eYY---~~aS~~--~~L--~ 409 (1744)
.+|... + +...|+. +.+.+. ...|.. ..| .
T Consensus 311 ~my~d~--------L---------------------------------A~rlG~~~~~~~~l~~el~~~SLk~qGlL~~r 349 (411)
T PF06500_consen 311 DMYLDV--------L---------------------------------ASRLGMAAVSDESLRGELNKFSLKTQGLLSGR 349 (411)
T ss_dssp HHHHHH--------H---------------------------------HHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS
T ss_pred HHHHHH--------H---------------------------------HHHhCCccCCHHHHHHHHHhcCcchhccccCC
Confidence 111000 0 0111111 111111 112322 234 6
Q ss_pred cCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEec-CCCccccCCCCchhHHHHHHHHHHHHHH
Q 000272 410 NIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCS-CLPSSVIGGGRAAESWCQNLVIEWLSAV 475 (1744)
Q Consensus 410 ~IkVPVLIIhG-DDp~VP~~aip~~la~~nPnv~LvLt~-gGHH~gF~e~~~~~sWv~r~VlEFL~av 475 (1744)
+.++|+|.+++ +|+++|.+.... .+..+.+-.+..++ ..=|.+|.. ....+.+||+..
T Consensus 350 r~~~plL~i~~~~D~v~P~eD~~l-ia~~s~~gk~~~~~~~~~~~gy~~-------al~~~~~Wl~~~ 409 (411)
T PF06500_consen 350 RCPTPLLAINGEDDPVSPIEDSRL-IAESSTDGKALRIPSKPLHMGYPQ-------ALDEIYKWLEDK 409 (411)
T ss_dssp -BSS-EEEEEETT-SSS-HHHHHH-HHHTBTT-EEEEE-SSSHHHHHHH-------HHHHHHHHHHHH
T ss_pred CCCcceEEeecCCCCCCCHHHHHH-HHhcCCCCceeecCCCccccchHH-------HHHHHHHHHHHh
Confidence 78899999999 899998765433 23444444555555 444766663 346788898754
No 78
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.13 E-value=5e-09 Score=121.25 Aligned_cols=111 Identities=13% Similarity=0.035 Sum_probs=69.6
Q ss_pred CCcEEEEEcCCCCCchhHHHH-H-HHHHHHhCCcEEEEEcC--CCCCCCCCCC-------CCCC----------CcCcHH
Q 000272 215 LDTTLLLVPGTAEGSIEKRIR-L-FVCEALRRGFFPVVMNP--RGCGGSPLTT-------SRLF----------TAADSD 273 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sYIr-~-La~~La~~GYrVVVfD~--RGhGgSplts-------prly----------~ag~td 273 (1744)
..|+|+++||+ +++...+.. . +...+.+.||.|+++|. ||+|.+.... ...| .....+
T Consensus 41 ~~P~vvllHG~-~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~ 119 (275)
T TIGR02821 41 PVPVLWYLSGL-TCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYS 119 (275)
T ss_pred CCCEEEEccCC-CCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHH
Confidence 36899999997 445554422 2 23344567999999997 7776432110 0001 001122
Q ss_pred HH-HHHHHHHHhhCC--CCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCCh
Q 000272 274 DI-CTAIQFIGKARP--WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDL 328 (1744)
Q Consensus 274 DL-~aaId~LrkryP--~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl 328 (1744)
.+ .+++..+...++ ..+++++||||||.+++.++.++++ .+.+++++++..+.
T Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~--~~~~~~~~~~~~~~ 175 (275)
T TIGR02821 120 YIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPD--RFKSVSAFAPIVAP 175 (275)
T ss_pred HHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcc--cceEEEEECCccCc
Confidence 22 233333444343 3589999999999999999999876 57888888877654
No 79
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.11 E-value=6.3e-10 Score=122.72 Aligned_cols=206 Identities=14% Similarity=0.200 Sum_probs=127.2
Q ss_pred CCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC-CCCCCcCcHHHHHHHHHHHHhhCCCCcE-
Q 000272 214 GLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTT-SRLFTAADSDDICTAIQFIGKARPWTTL- 291 (1744)
Q Consensus 214 g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSplts-prly~ag~tdDL~aaId~LrkryP~spI- 291 (1744)
+...+||+|||+-..-...++..+|..+.+.||-++.||+||.|.|...- +..|. ...+||..+++|+... .++
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~-~eadDL~sV~q~~s~~---nr~v 106 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYN-TEADDLHSVIQYFSNS---NRVV 106 (269)
T ss_pred CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCccc-chHHHHHHHHHHhccC---ceEE
Confidence 44678999999854444458889999999999999999999999986432 11221 2359999999999763 232
Q ss_pred -EEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHhHHHHHHHHHHHHHhh-hhhhhccCCCcCH
Q 000272 292 -MSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSN-KELFKGRAKGFDV 369 (1744)
Q Consensus 292 -vLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly~~~L~~~Lk~~L~r~-~~lf~~~~~~~Di 369 (1744)
+++|||=||.+++.|+..+.+ +.-++-++.-++...... ..+.+....++... ..-.+++...+.
T Consensus 107 ~vi~gHSkGg~Vvl~ya~K~~d---~~~viNcsGRydl~~~I~---------eRlg~~~l~~ike~Gfid~~~rkG~y~- 173 (269)
T KOG4667|consen 107 PVILGHSKGGDVVLLYASKYHD---IRNVINCSGRYDLKNGIN---------ERLGEDYLERIKEQGFIDVGPRKGKYG- 173 (269)
T ss_pred EEEEeecCccHHHHHHHHhhcC---chheEEcccccchhcchh---------hhhcccHHHHHHhCCceecCcccCCcC-
Confidence 689999999999999999865 455565666666543221 01111000011000 000000000000
Q ss_pred HHHhhhhcHHHHHHHHhhhccchhhHHHHHhhcCcchhcC--cCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEe
Q 000272 370 EKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVG--NIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLC 446 (1744)
Q Consensus 370 d~vlkarTirEFDd~~tap~~Gf~sv~eYY~~aS~~~~L~--~IkVPVLIIhG-DDp~VP~~aip~~la~~nPnv~LvLt 446 (1744)
.+... + +..+ .-...+..... .++||+|-+|| .|.+||.+... +.++..|+-.|.++
T Consensus 174 -----~rvt~---e----------Slmd-rLntd~h~aclkId~~C~VLTvhGs~D~IVPve~Ak-efAk~i~nH~L~iI 233 (269)
T KOG4667|consen 174 -----YRVTE---E----------SLMD-RLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAK-EFAKIIPNHKLEII 233 (269)
T ss_pred -----ceecH---H----------HHHH-HHhchhhhhhcCcCccCceEEEeccCCceeechhHH-HHHHhccCCceEEe
Confidence 00000 0 0000 01111222222 34799999999 99999987653 55788999999999
Q ss_pred cCCCccccCC
Q 000272 447 SCLPSSVIGG 456 (1744)
Q Consensus 447 ~gGHH~gF~e 456 (1744)
+++.|++...
T Consensus 234 EgADHnyt~~ 243 (269)
T KOG4667|consen 234 EGADHNYTGH 243 (269)
T ss_pred cCCCcCccch
Confidence 9999977664
No 80
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.10 E-value=1.2e-09 Score=121.28 Aligned_cols=109 Identities=13% Similarity=0.106 Sum_probs=80.0
Q ss_pred CCCcEEEEEcCCCCCchhHHH--HHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCC-------CcCcHHHHHHHHHHHHh
Q 000272 214 GLDTTLLLVPGTAEGSIEKRI--RLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLF-------TAADSDDICTAIQFIGK 284 (1744)
Q Consensus 214 g~~P~VVLLHGltGGS~~sYI--r~La~~La~~GYrVVVfD~RGhGgSpltsprly-------~ag~tdDL~aaId~Lrk 284 (1744)
+..|+||++||++ ++...+. ..+...+.+.||.|+++|+||++.+... ...+ ......|+..+++++..
T Consensus 11 ~~~P~vv~lHG~~-~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 88 (212)
T TIGR01840 11 GPRALVLALHGCG-QTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNC-WDWFFTHHRARGTGEVESLHQLIDAVKA 88 (212)
T ss_pred CCCCEEEEeCCCC-CCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCC-CCCCCccccCCCCccHHHHHHHHHHHHH
Confidence 3578999999974 4444443 2355666778999999999999854321 1111 12356889999999988
Q ss_pred hCCC--CcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCC
Q 000272 285 ARPW--TTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPF 326 (1744)
Q Consensus 285 ryP~--spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~ 326 (1744)
+++. .+++++||||||.+++.++.++++ .+.++++++++.
T Consensus 89 ~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~--~~~~~~~~~g~~ 130 (212)
T TIGR01840 89 NYSIDPNRVYVTGLSAGGGMTAVLGCTYPD--VFAGGASNAGLP 130 (212)
T ss_pred hcCcChhheEEEEECHHHHHHHHHHHhCch--hheEEEeecCCc
Confidence 8753 489999999999999999998875 577777777553
No 81
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.09 E-value=4e-09 Score=112.01 Aligned_cols=102 Identities=17% Similarity=0.191 Sum_probs=68.2
Q ss_pred CcEEEEEcCCCCCchhHHHHHHHHH--HHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEE
Q 000272 216 DTTLLLVPGTAEGSIEKRIRLFVCE--ALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMS 293 (1744)
Q Consensus 216 ~P~VVLLHGltGGS~~sYIr~La~~--La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIvL 293 (1744)
.|+|+++||+.+ +...|....... .... |+|+++|+||||.|. .. ........+|+..+++.+ +..++++
T Consensus 21 ~~~i~~~hg~~~-~~~~~~~~~~~~~~~~~~-~~~~~~d~~g~g~s~-~~-~~~~~~~~~~~~~~~~~~----~~~~~~l 92 (282)
T COG0596 21 GPPLVLLHGFPG-SSSVWRPVFKVLPALAAR-YRVIAPDLRGHGRSD-PA-GYSLSAYADDLAALLDAL----GLEKVVL 92 (282)
T ss_pred CCeEEEeCCCCC-chhhhHHHHHHhhccccc-eEEEEecccCCCCCC-cc-cccHHHHHHHHHHHHHHh----CCCceEE
Confidence 358999999854 444443311111 1113 999999999999986 11 000011145555555544 4456999
Q ss_pred EEecHHHHHHHHHHHHhCCCCCceEEEEecCCCC
Q 000272 294 VGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFD 327 (1744)
Q Consensus 294 VGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~D 327 (1744)
+||||||.+++.|+.++++ .+.++++++++..
T Consensus 93 ~G~S~Gg~~~~~~~~~~p~--~~~~~v~~~~~~~ 124 (282)
T COG0596 93 VGHSMGGAVALALALRHPD--RVRGLVLIGPAPP 124 (282)
T ss_pred EEecccHHHHHHHHHhcch--hhheeeEecCCCC
Confidence 9999999999999999876 6888888887654
No 82
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.08 E-value=7.4e-10 Score=123.35 Aligned_cols=109 Identities=24% Similarity=0.248 Sum_probs=81.0
Q ss_pred EEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC--C
Q 000272 189 VCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSR--L 266 (1744)
Q Consensus 189 e~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltspr--l 266 (1744)
..+.++||..+..+.+... +..+--+++.|-+ |-...|+|.++..+.++||.|+.+|+||.|.|..+..+ .
T Consensus 8 ~~l~~~DG~~l~~~~~pA~------~~~~g~~~va~a~-Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~ 80 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPAD------GKASGRLVVAGAT-GVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQ 80 (281)
T ss_pred cccccCCCccCccccccCC------CCCCCcEEecccC-CcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCc
Confidence 4578899999887755331 2223244444433 34556789999999999999999999999999655433 2
Q ss_pred CCcC-c-HHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHH
Q 000272 267 FTAA-D-SDDICTAIQFIGKARPWTTLMSVGWGYGANMLT 304 (1744)
Q Consensus 267 y~ag-~-tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL 304 (1744)
+.+. | ..|+.++|+.+++..|.-|.+.|||||||.++.
T Consensus 81 ~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~g 120 (281)
T COG4757 81 WRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALG 120 (281)
T ss_pred cchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeec
Confidence 2222 2 379999999999988888999999999997654
No 83
>PRK11460 putative hydrolase; Provisional
Probab=99.06 E-value=5.3e-09 Score=118.57 Aligned_cols=105 Identities=12% Similarity=0.038 Sum_probs=66.2
Q ss_pred CCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC-CCCCCC------cCcH-------HHHHHHHH
Q 000272 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLT-TSRLFT------AADS-------DDICTAIQ 280 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSplt-sprly~------ag~t-------dDL~aaId 280 (1744)
..|+||++||+ |++... +..++..+.+.++.+.+++.||....... ....|. .... +++.+.++
T Consensus 15 ~~~~vIlLHG~-G~~~~~-~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 15 AQQLLLLFHGV-GDNPVA-MGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCcEEEEEeCC-CCChHH-HHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 46899999997 555444 56788888888888888888886433111 111111 0111 23344555
Q ss_pred HHHhhCC--CCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEec
Q 000272 281 FIGKARP--WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCID 323 (1744)
Q Consensus 281 ~LrkryP--~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlIS 323 (1744)
++..++. ..+++++||||||.+++.++..+++ .+.++++++
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~--~~~~vv~~s 135 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALEAVKAEPG--LAGRVIAFS 135 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCC--cceEEEEec
Confidence 5555543 4589999999999999998877653 344455443
No 84
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.06 E-value=1.4e-09 Score=127.17 Aligned_cols=238 Identities=17% Similarity=0.132 Sum_probs=134.9
Q ss_pred CCCcEEEEEcCCCCCchhHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEE
Q 000272 214 GLDTTLLLVPGTAEGSIEKRIRLFVCEALR-RGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLM 292 (1744)
Q Consensus 214 g~~P~VVLLHGltGGS~~sYIr~La~~La~-~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIv 292 (1744)
...|+++++||+.| +... |+.+...|.+ .|-+++..|.|-||.|+..+...|. ...+|+..+|+..+..+...++.
T Consensus 50 ~~~Pp~i~lHGl~G-S~~N-w~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~-~ma~dv~~Fi~~v~~~~~~~~~~ 126 (315)
T KOG2382|consen 50 ERAPPAIILHGLLG-SKEN-WRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYE-AMAEDVKLFIDGVGGSTRLDPVV 126 (315)
T ss_pred CCCCceEEeccccc-CCCC-HHHHHHHhcccccCceEEEecccCCCCccccccCHH-HHHHHHHHHHHHcccccccCCce
Confidence 45799999999965 5544 5666666554 5789999999999999877766643 34688998888876544456899
Q ss_pred EEEecHHH-HHHHHHHHHhCCCCCceEEEEe-cCCCChhhhhccCchhHHhHHHH----H----HHHHHHHHhhhhhhhc
Q 000272 293 SVGWGYGA-NMLTKYLAEVGERTPLTAVTCI-DNPFDLEEATRSSPHHIALDEKL----A----NGLIDILRSNKELFKG 362 (1744)
Q Consensus 293 LVGhSMGG-~IaL~YLae~ge~s~L~AaVlI-SpP~Dl~es~~slp~~~ly~~~L----~----~~Lk~~L~r~~~lf~~ 362 (1744)
++|||||| -+++.+....++ .+..++++ .+|.-....... +..++.... . ...+..+.+..
T Consensus 127 l~GHsmGG~~~~m~~t~~~p~--~~~rliv~D~sP~~~~~~~~e--~~e~i~~m~~~d~~~~~~~~rke~~~~l~----- 197 (315)
T KOG2382|consen 127 LLGHSMGGVKVAMAETLKKPD--LIERLIVEDISPGGVGRSYGE--YRELIKAMIQLDLSIGVSRGRKEALKSLI----- 197 (315)
T ss_pred ecccCcchHHHHHHHHHhcCc--ccceeEEEecCCccCCcccch--HHHHHHHHHhccccccccccHHHHHHHHH-----
Confidence 99999999 555666666655 34455554 334211111000 000000000 0 00000000000
Q ss_pred cCCCcCHHHHhhhhcHHHHHHHHhh-----hccch----hhHHHHHhh---cCcchhc--CcCCccEEEEEe-CCCCCCC
Q 000272 363 RAKGFDVEKALSAKSVRDFEKAISM-----VSYGF----EAIEDFYSK---SSTRSVV--GNIKIPVLFIQN-DAGAVPP 427 (1744)
Q Consensus 363 ~~~~~Did~vlkarTirEFDd~~ta-----p~~Gf----~sv~eYY~~---aS~~~~L--~~IkVPVLIIhG-DDp~VP~ 427 (1744)
.+.....+++|-..-.. ..+.| .++.++|.. .+....+ ..-..|+|+|+| +++++|.
T Consensus 198 --------~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~ 269 (315)
T KOG2382|consen 198 --------EVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPD 269 (315)
T ss_pred --------HHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcCh
Confidence 01111122222111000 00111 122333322 1222222 555789999999 9999998
Q ss_pred CChHHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHH
Q 000272 428 FSIPRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAV 475 (1744)
Q Consensus 428 ~aip~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av 475 (1744)
...++. .+..|++++++++.+||....+ + +.-+...|.+|+...
T Consensus 270 ~~~~~~-~~~fp~~e~~~ld~aGHwVh~E--~-P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 270 EHYPRM-EKIFPNVEVHELDEAGHWVHLE--K-PEEFIESISEFLEEP 313 (315)
T ss_pred hHHHHH-HHhccchheeecccCCceeecC--C-HHHHHHHHHHHhccc
Confidence 877653 4667999999999666655554 2 334567888888654
No 85
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.06 E-value=1.3e-08 Score=133.12 Aligned_cols=229 Identities=14% Similarity=0.116 Sum_probs=129.8
Q ss_pred HHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCC----------------CCcEEEEEecHH
Q 000272 236 LFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARP----------------WTTLMSVGWGYG 299 (1744)
Q Consensus 236 ~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP----------------~spIvLVGhSMG 299 (1744)
.+..+++.+||.||++|.||+|+|.+.. ..+.....+|..++|+|+..+.. +.++.++|.|||
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~-~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~ 348 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCP-TTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYL 348 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcC-ccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHH
Confidence 4567899999999999999999997642 22334467899999999985321 469999999999
Q ss_pred HHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccC--c-hhHHhHHHHHHHHHHHH-HhhhhhhhccCCCcCHHHHhhh
Q 000272 300 ANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSS--P-HHIALDEKLANGLIDIL-RSNKELFKGRAKGFDVEKALSA 375 (1744)
Q Consensus 300 G~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~sl--p-~~~ly~~~L~~~Lk~~L-~r~~~lf~~~~~~~Did~vlka 375 (1744)
|.+.+..|+..+. .++++|.+++..+........ . +...+...-...+...+ .+.. ..+.. ........
T Consensus 349 G~~~~~aAa~~pp--~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~--~~~~~--~~~~~~~~- 421 (767)
T PRK05371 349 GTLPNAVATTGVE--GLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNL--LAGDY--LRHNEACE- 421 (767)
T ss_pred HHHHHHHHhhCCC--cceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhccc--Ccchh--hcchHHHH-
Confidence 9999988877544 588999887766554322110 0 00000000000000000 0000 00000 00000000
Q ss_pred hcHHHHHHHHhhhccchhhHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCC-hHH-HHHh-cCCCeEEEEecCCCc
Q 000272 376 KSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFS-IPR-SSIA-ENPFTSLLLCSCLPS 451 (1744)
Q Consensus 376 rTirEFDd~~tap~~Gf~sv~eYY~~aS~~~~L~~IkVPVLIIhG-DDp~VP~~a-ip~-~la~-~nPnv~LvLt~gGHH 451 (1744)
..+.++...... .. .+..+||...+....+++|++|+|+||| .|..+++.. ... .... .....++.+.+++|+
T Consensus 422 ~~~~~~~~~~~~-~~--~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~g~H~ 498 (767)
T PRK05371 422 KLLAELTAAQDR-KT--GDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQGGHV 498 (767)
T ss_pred HHHhhhhhhhhh-cC--CCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeCCCcc
Confidence 000111111111 11 1345788888888899999999999999 999998643 222 2222 234567766666654
Q ss_pred cccCCCCchhHHHHHHHHHHHHHHHhh
Q 000272 452 SVIGGGRAAESWCQNLVIEWLSAVELG 478 (1744)
Q Consensus 452 ~gF~e~~~~~sWv~r~VlEFL~av~~~ 478 (1744)
.... .....| .+.+.+||+....+
T Consensus 499 -~~~~-~~~~d~-~e~~~~Wfd~~LkG 522 (767)
T PRK05371 499 -YPNN-WQSIDF-RDTMNAWFTHKLLG 522 (767)
T ss_pred -CCCc-hhHHHH-HHHHHHHHHhcccc
Confidence 3222 122334 46778888765544
No 86
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.05 E-value=4.2e-09 Score=127.94 Aligned_cols=286 Identities=17% Similarity=0.151 Sum_probs=176.6
Q ss_pred CcceEEEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHH----HHHHHHHHHhCCcEEEEEcCCCCCC
Q 000272 183 KLEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKR----IRLFVCEALRRGFFPVVMNPRGCGG 258 (1744)
Q Consensus 183 ~V~YeRe~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sY----Ir~La~~La~~GYrVVVfD~RGhGg 258 (1744)
..+.+...+++.||..+.++..... .+.+|+|++.||+..+|.... -+.++-.|+.+||+|+.-|.||---
T Consensus 45 gy~~E~h~V~T~DgYiL~lhRIp~~-----~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~y 119 (403)
T KOG2624|consen 45 GYPVEEHEVTTEDGYILTLHRIPRG-----KKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTY 119 (403)
T ss_pred CCceEEEEEEccCCeEEEEeeecCC-----CCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCccc
Confidence 3567888999999998888766432 167899999999986554432 3567888999999999999999665
Q ss_pred CCC-------CCCCCCCcCc----HHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCC-CCceEEEEecCCC
Q 000272 259 SPL-------TTSRLFTAAD----SDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGER-TPLTAVTCIDNPF 326 (1744)
Q Consensus 259 Spl-------tsprly~ag~----tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~-s~L~AaVlISpP~ 326 (1744)
|.. ....+|.+.+ ..||.++|+|+...-+..+++.||||-|+.+...++.+.++. ..|+.+++++|..
T Consensus 120 Sr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 120 SRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred chhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 521 1222444443 369999999999888888999999999999999999887543 3588888888766
Q ss_pred ChhhhhccC-------------------------chhHHhHHHHHHHHHH---HHHhhhh----hhhcc-CCCcCHH---
Q 000272 327 DLEEATRSS-------------------------PHHIALDEKLANGLID---ILRSNKE----LFKGR-AKGFDVE--- 370 (1744)
Q Consensus 327 Dl~es~~sl-------------------------p~~~ly~~~L~~~Lk~---~L~r~~~----lf~~~-~~~~Did--- 370 (1744)
-...+ ..+ +.+. +.+.+.+.++. ....... ++-+. ...++..
T Consensus 200 ~~k~~-~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~-~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~ 277 (403)
T KOG2624|consen 200 FPKHI-KSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNL-FIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLP 277 (403)
T ss_pred hhccc-ccHHHHhhhhhhhhhhHHHHhcCCccccchhh-HHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccc
Confidence 32211 100 0000 00111111111 0000000 00000 0000000
Q ss_pred ----HH---hhhhcHHHHHHHHhh---hccchhh--HHHHHhh-cCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHh
Q 000272 371 ----KA---LSAKSVRDFEKAISM---VSYGFEA--IEDFYSK-SSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIA 436 (1744)
Q Consensus 371 ----~v---lkarTirEFDd~~ta---p~~Gf~s--v~eYY~~-aS~~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la~ 436 (1744)
.. .+.+.+..|-+.+.. +.|.|.+ ...+|.. ..|...+.+|++|+.+.+| +|.++.++.+.... .
T Consensus 278 ~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~-~ 356 (403)
T KOG2624|consen 278 VYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILL-L 356 (403)
T ss_pred hhhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHH-H
Confidence 00 122344445443322 1222222 2233443 3456779999999999999 88888877665433 3
Q ss_pred cCCCeEEEE---ecCCCccccCCCCchhHHHHHHHHHHHHHHH
Q 000272 437 ENPFTSLLL---CSCLPSSVIGGGRAAESWCQNLVIEWLSAVE 476 (1744)
Q Consensus 437 ~nPnv~LvL---t~gGHH~gF~e~~~~~sWv~r~VlEFL~av~ 476 (1744)
..+++.+.. .+.-.|..|.-+.+.+..+.+.|++.++..+
T Consensus 357 ~~~~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 357 VLPNSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred hcccccccccccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 344444322 5777888888777777778899999998765
No 87
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.05 E-value=1e-09 Score=136.95 Aligned_cols=227 Identities=13% Similarity=0.091 Sum_probs=135.9
Q ss_pred CCCcEEEEEcCCCCCchhHHH------HHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCc-CcHHHHHHHHHHHHhhC
Q 000272 214 GLDTTLLLVPGTAEGSIEKRI------RLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTA-ADSDDICTAIQFIGKAR 286 (1744)
Q Consensus 214 g~~P~VVLLHGltGGS~~sYI------r~La~~La~~GYrVVVfD~RGhGgSpltsprly~a-g~tdDL~aaId~Lrkry 286 (1744)
..+.+|||+|.+. ...|+ +.++++|.++||.|+++|+|+-+... +.+.. .+.+.+.++|+.++...
T Consensus 213 v~~~PLLIVPp~I---NK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~----r~~~ldDYv~~i~~Ald~V~~~t 285 (560)
T TIGR01839 213 QHARPLLVVPPQI---NKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH----REWGLSTYVDALKEAVDAVRAIT 285 (560)
T ss_pred cCCCcEEEechhh---hhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh----cCCCHHHHHHHHHHHHHHHHHhc
Confidence 3467899999974 34553 67999999999999999999865442 22222 23468899999999988
Q ss_pred CCCcEEEEEecHHHHHHHH----HHHHhCCCCCceEEEEecCCCChhhhhcc-Cch--hHH--hHHHH----------HH
Q 000272 287 PWTTLMSVGWGYGANMLTK----YLAEVGERTPLTAVTCIDNPFDLEEATRS-SPH--HIA--LDEKL----------AN 347 (1744)
Q Consensus 287 P~spIvLVGhSMGG~IaL~----YLae~ge~s~L~AaVlISpP~Dl~es~~s-lp~--~~l--y~~~L----------~~ 347 (1744)
+..++.++||||||.+++. |++.+++ .+|+.++++.+++|+.....- ... ..+ ....+ ..
T Consensus 286 G~~~vnl~GyC~GGtl~a~~~a~~aA~~~~-~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~G~lpg~~ma 364 (560)
T TIGR01839 286 GSRDLNLLGACAGGLTCAALVGHLQALGQL-RKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQAGVLDGSEMA 364 (560)
T ss_pred CCCCeeEEEECcchHHHHHHHHHHHhcCCC-CceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhcCCcCHHHHH
Confidence 8889999999999999987 6666542 369999999999997642211 000 000 00000 00
Q ss_pred HHHHHHHhhh---------hhhhccCCCcCHHHHhhhhcHHHHH-HHHhhhccchhhHHHHHhhcCcc-----------h
Q 000272 348 GLIDILRSNK---------ELFKGRAKGFDVEKALSAKSVRDFE-KAISMVSYGFEAIEDFYSKSSTR-----------S 406 (1744)
Q Consensus 348 ~Lk~~L~r~~---------~lf~~~~~~~Did~vlkarTirEFD-d~~tap~~Gf~sv~eYY~~aS~~-----------~ 406 (1744)
..-.+++.+. .++.+....+|+ ..|. +....+..-|....++|.+.... -
T Consensus 365 ~~F~~LrP~dliw~y~v~~yllg~~p~~fdl---------l~Wn~D~t~lPg~~~~e~l~ly~~N~L~~pG~l~v~G~~i 435 (560)
T TIGR01839 365 KVFAWMRPNDLIWNYWVNNYLLGNEPPAFDI---------LYWNNDTTRLPAAFHGDLLDMFKSNPLTRPDALEVCGTPI 435 (560)
T ss_pred HHHHhcCchhhhHHHHHHHhhcCCCcchhhH---------HHHhCcCccchHHHHHHHHHHHhcCCCCCCCCEEECCEEe
Confidence 0000011000 000000011111 1110 00001111122233466554432 2
Q ss_pred hcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCccccCCC
Q 000272 407 VVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGG 457 (1744)
Q Consensus 407 ~L~~IkVPVLIIhG-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~ 457 (1744)
.|.+|++|+|++.+ +|.++|+++............++++.++||..++...
T Consensus 436 dL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~~gGHIggivnp 487 (560)
T TIGR01839 436 DLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKRRFVLSNSGHIQSILNP 487 (560)
T ss_pred chhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCeEEEecCCCccccccCC
Confidence 48999999999999 9999998765332212223588999999998887754
No 88
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.03 E-value=1.2e-08 Score=116.57 Aligned_cols=202 Identities=13% Similarity=0.157 Sum_probs=135.2
Q ss_pred EEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCC-CCCCCCC--CC
Q 000272 189 VCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGC-GGSPLTT--SR 265 (1744)
Q Consensus 189 e~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGh-GgSplts--pr 265 (1744)
..+..+| +.+.--|..|. ..+..|.||++|++.|- ..+++..++.++..||.|+++|+=+. |...... +.
T Consensus 5 v~~~~~~-~~~~~~~a~P~----~~~~~P~VIv~hei~Gl--~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~ 77 (236)
T COG0412 5 VTIPAPD-GELPAYLARPA----GAGGFPGVIVLHEIFGL--NPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPA 77 (236)
T ss_pred eEeeCCC-ceEeEEEecCC----cCCCCCEEEEEecccCC--chHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHH
Confidence 3456667 45554455542 22233899999998543 34899999999999999999999663 2221111 10
Q ss_pred ---------CCCcCcHHHHHHHHHHHHhhC--CCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhcc
Q 000272 266 ---------LFTAADSDDICTAIQFIGKAR--PWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRS 334 (1744)
Q Consensus 266 ---------ly~ag~tdDL~aaId~Lrkry--P~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~s 334 (1744)
........|+.++++|+..+. ...+|.++||||||.+++.++...+ .++++++.-+..-..
T Consensus 78 ~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~---~v~a~v~fyg~~~~~----- 149 (236)
T COG0412 78 ELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP---EVKAAVAFYGGLIAD----- 149 (236)
T ss_pred HHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC---CccEEEEecCCCCCC-----
Confidence 111233589999999998654 2468999999999999999998754 488888762211000
Q ss_pred CchhHHhHHHHHHHHHHHHHhhhhhhhccCCCcCHHHHhhhhcHHHHHHHHhhhccchhhHHHHHhhcCcchhcCcCCcc
Q 000272 335 SPHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIP 414 (1744)
Q Consensus 335 lp~~~ly~~~L~~~Lk~~L~r~~~lf~~~~~~~Did~vlkarTirEFDd~~tap~~Gf~sv~eYY~~aS~~~~L~~IkVP 414 (1744)
......++++|
T Consensus 150 ---------------------------------------------------------------------~~~~~~~~~~p 160 (236)
T COG0412 150 ---------------------------------------------------------------------DTADAPKIKVP 160 (236)
T ss_pred ---------------------------------------------------------------------cccccccccCc
Confidence 00113478999
Q ss_pred EEEEEe-CCCCCCCCChH---HHHHhcCCCeEEEEecCCCccccCCC----C------chhHHHHHHHHHHHHHHH
Q 000272 415 VLFIQN-DAGAVPPFSIP---RSSIAENPFTSLLLCSCLPSSVIGGG----R------AAESWCQNLVIEWLSAVE 476 (1744)
Q Consensus 415 VLIIhG-DDp~VP~~aip---~~la~~nPnv~LvLt~gGHH~gF~e~----~------~~~sWv~r~VlEFL~av~ 476 (1744)
+|+++| .|+.+|..... .........+.+.++++.+|+++... . ....| +.+.+||++..
T Consensus 161 vl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~--~~~~~ff~~~~ 234 (236)
T COG0412 161 VLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAW--QRVLAFFKRLL 234 (236)
T ss_pred EEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHH--HHHHHHHHHhc
Confidence 999999 99999875432 22222224788999999999988542 1 12234 78888988654
No 89
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.03 E-value=1.5e-08 Score=120.65 Aligned_cols=240 Identities=15% Similarity=0.119 Sum_probs=131.8
Q ss_pred cCCcceEEEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCC
Q 000272 181 EGKLEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSP 260 (1744)
Q Consensus 181 ~p~V~YeRe~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSp 260 (1744)
.+.+.+....++..+|..|....+.|.+ ..+.-|.||.+||.. +....+. ..+ .++.+||.|+.+|.||+|+..
T Consensus 51 ~~~~~vy~v~f~s~~g~~V~g~l~~P~~---~~~~~Pavv~~hGyg-~~~~~~~-~~~-~~a~~G~~vl~~d~rGqg~~~ 124 (320)
T PF05448_consen 51 TPGVEVYDVSFESFDGSRVYGWLYRPKN---AKGKLPAVVQFHGYG-GRSGDPF-DLL-PWAAAGYAVLAMDVRGQGGRS 124 (320)
T ss_dssp BSSEEEEEEEEEEGGGEEEEEEEEEES----SSSSEEEEEEE--TT---GGGHH-HHH-HHHHTT-EEEEE--TTTSSSS
T ss_pred CCCEEEEEEEEEccCCCEEEEEEEecCC---CCCCcCEEEEecCCC-CCCCCcc-ccc-ccccCCeEEEEecCCCCCCCC
Confidence 4567777888888899888754444421 235678999999974 4433332 222 467899999999999999431
Q ss_pred CC-------CCCCC------------Cc-CcHHHHHHHHHHHHhhCC--CCcEEEEEecHHHHHHHHHHHHhCCCCCceE
Q 000272 261 LT-------TSRLF------------TA-ADSDDICTAIQFIGKARP--WTTLMSVGWGYGANMLTKYLAEVGERTPLTA 318 (1744)
Q Consensus 261 lt-------sprly------------~a-g~tdDL~aaId~LrkryP--~spIvLVGhSMGG~IaL~YLae~ge~s~L~A 318 (1744)
.. ....+ .+ ....|...+++++..+.. ..+|.+.|.|.||.+++..++-.+ +|++
T Consensus 125 ~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~---rv~~ 201 (320)
T PF05448_consen 125 PDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP---RVKA 201 (320)
T ss_dssp -B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS---T-SE
T ss_pred CCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc---cccE
Confidence 10 00000 00 124789999999987643 369999999999999999998754 4888
Q ss_pred EEEecCCC-Chhhhhcc----CchhHHhHHHHHHHHHHHHHhhhhhhhccCCCcCHHHHhhhhcHHHHHHHHhhhccchh
Q 000272 319 VTCIDNPF-DLEEATRS----SPHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFE 393 (1744)
Q Consensus 319 aVlISpP~-Dl~es~~s----lp~~~ly~~~L~~~Lk~~L~r~~~lf~~~~~~~Did~vlkarTirEFDd~~tap~~Gf~ 393 (1744)
++...|.+ |....... .++. .+..+++... .. .... ++.+
T Consensus 202 ~~~~vP~l~d~~~~~~~~~~~~~y~---------~~~~~~~~~d----~~-----------~~~~---~~v~-------- 246 (320)
T PF05448_consen 202 AAADVPFLCDFRRALELRADEGPYP---------EIRRYFRWRD----PH-----------HERE---PEVF-------- 246 (320)
T ss_dssp EEEESESSSSHHHHHHHT--STTTH---------HHHHHHHHHS----CT-----------HCHH---HHHH--------
T ss_pred EEecCCCccchhhhhhcCCccccHH---------HHHHHHhccC----CC-----------cccH---HHHH--------
Confidence 88776544 33322110 0111 1111111000 00 0000 0000
Q ss_pred hHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcC-CCeEEEEecCCCccccCCCCchhHHHHHHHHHH
Q 000272 394 AIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAEN-PFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEW 471 (1744)
Q Consensus 394 sv~eYY~~aS~~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la~~n-Pnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEF 471 (1744)
....|| +..+..++|++|+|+-.| .|++||+.+.- ...... -..++.+++.+||-... .+..+...+|
T Consensus 247 ~~L~Y~---D~~nfA~ri~~pvl~~~gl~D~~cPP~t~f-A~yN~i~~~K~l~vyp~~~He~~~------~~~~~~~~~~ 316 (320)
T PF05448_consen 247 ETLSYF---DAVNFARRIKCPVLFSVGLQDPVCPPSTQF-AAYNAIPGPKELVVYPEYGHEYGP------EFQEDKQLNF 316 (320)
T ss_dssp HHHHTT----HHHHGGG--SEEEEEEETT-SSS-HHHHH-HHHCC--SSEEEEEETT--SSTTH------HHHHHHHHHH
T ss_pred HHHhhh---hHHHHHHHcCCCEEEEEecCCCCCCchhHH-HHHhccCCCeeEEeccCcCCCchh------hHHHHHHHHH
Confidence 011222 344567889999999999 99999986532 222222 24789999999984443 2335778888
Q ss_pred HHH
Q 000272 472 LSA 474 (1744)
Q Consensus 472 L~a 474 (1744)
|..
T Consensus 317 l~~ 319 (320)
T PF05448_consen 317 LKE 319 (320)
T ss_dssp HHH
T ss_pred Hhc
Confidence 864
No 90
>PRK10162 acetyl esterase; Provisional
Probab=98.99 E-value=4.5e-08 Score=116.01 Aligned_cols=131 Identities=11% Similarity=0.063 Sum_probs=89.4
Q ss_pred cceEEEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCC--CchhHHHHHHHHHHHh-CCcEEEEEcCCCCCCCC
Q 000272 184 LEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAE--GSIEKRIRLFVCEALR-RGFFPVVMNPRGCGGSP 260 (1744)
Q Consensus 184 V~YeRe~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltG--GS~~sYIr~La~~La~-~GYrVVVfD~RGhGgSp 260 (1744)
+..+...+...+| .+.++++.|.. ...|+||++||+.. |+... +..++..++. .||.|+.+|||.....+
T Consensus 55 ~~~~~~~i~~~~g-~i~~~~y~P~~-----~~~p~vv~~HGGg~~~g~~~~-~~~~~~~la~~~g~~Vv~vdYrlape~~ 127 (318)
T PRK10162 55 MATRAYMVPTPYG-QVETRLYYPQP-----DSQATLFYLHGGGFILGNLDT-HDRIMRLLASYSGCTVIGIDYTLSPEAR 127 (318)
T ss_pred ceEEEEEEecCCC-ceEEEEECCCC-----CCCCEEEEEeCCcccCCCchh-hhHHHHHHHHHcCCEEEEecCCCCCCCC
Confidence 3334445666666 57888887631 23589999999531 23333 3345666665 69999999999764322
Q ss_pred CCCCCCCCcCcHHHHHHHHHHHHhh---CC--CCcEEEEEecHHHHHHHHHHHHhCC----CCCceEEEEecCCCCh
Q 000272 261 LTTSRLFTAADSDDICTAIQFIGKA---RP--WTTLMSVGWGYGANMLTKYLAEVGE----RTPLTAVTCIDNPFDL 328 (1744)
Q Consensus 261 ltsprly~ag~tdDL~aaId~Lrkr---yP--~spIvLVGhSMGG~IaL~YLae~ge----~s~L~AaVlISpP~Dl 328 (1744)
|. ...+|+.++++|+.+. ++ ..+++++|+|+||++++..+....+ ...+.+++++++.++.
T Consensus 128 ------~p-~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 128 ------FP-QAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred ------CC-CcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCC
Confidence 21 2468999999998653 32 3589999999999999988865322 1357888888887775
No 91
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.95 E-value=1.2e-08 Score=124.11 Aligned_cols=108 Identities=16% Similarity=0.129 Sum_probs=75.9
Q ss_pred CcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEEEE
Q 000272 216 DTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVG 295 (1744)
Q Consensus 216 ~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIvLVG 295 (1744)
.|+||+++.+. +......|.++++|+. ||.|++.||+--+..+....++-...+.+-+.++|+++ +. ++.++|
T Consensus 102 ~~pvLiV~Pl~-g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~----G~-~v~l~G 174 (406)
T TIGR01849 102 GPAVLIVAPMS-GHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFL----GP-DIHVIA 174 (406)
T ss_pred CCcEEEEcCCc-hHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHh----CC-CCcEEE
Confidence 37899999985 3333457899999999 99999999976665543323322222233334444444 33 399999
Q ss_pred ecHHHHHHHHHHHHhCCC---CCceEEEEecCCCChhh
Q 000272 296 WGYGANMLTKYLAEVGER---TPLTAVTCIDNPFDLEE 330 (1744)
Q Consensus 296 hSMGG~IaL~YLae~ge~---s~L~AaVlISpP~Dl~e 330 (1744)
+|+||.+++.|++...+. ..++.++++++|+|...
T Consensus 175 vCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 175 VCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARA 212 (406)
T ss_pred EchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCC
Confidence 999999999888775432 35899999999999865
No 92
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.84 E-value=2.6e-07 Score=119.96 Aligned_cols=119 Identities=12% Similarity=0.084 Sum_probs=79.9
Q ss_pred EEEcCCCcEEEEEecCCCc--cccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC-----
Q 000272 190 CVNTEDGGVISLDWPSNLD--LHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLT----- 262 (1744)
Q Consensus 190 ~L~t~DGG~IaLDW~~p~~--~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSplt----- 262 (1744)
.+.++||..+.+--..... ........|+||++||+++ ... .++.++..+.++||+|+++|+||||.+...
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g-~~~-~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~ 498 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITG-AKE-NALAFAGTLAAAGVATIAIDHPLHGARSFDANASG 498 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCC-CHH-HHHHHHHHHHhCCcEEEEeCCCCCCcccccccccc
Confidence 4566777766543221100 0001122478999999854 433 356788899999999999999999998332
Q ss_pred ----CCC--CC-C-----------cCcHHHHHHHHHHHH------hh------CCCCcEEEEEecHHHHHHHHHHHHh
Q 000272 263 ----TSR--LF-T-----------AADSDDICTAIQFIG------KA------RPWTTLMSVGWGYGANMLTKYLAEV 310 (1744)
Q Consensus 263 ----spr--ly-~-----------ag~tdDL~aaId~Lr------kr------yP~spIvLVGhSMGG~IaL~YLae~ 310 (1744)
... .| + .....|+..+...++ .. ++..+++++||||||.+...|++..
T Consensus 499 ~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 499 VNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred ccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 111 11 1 112478888888887 33 5678999999999999999999763
No 93
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.80 E-value=1e-07 Score=108.80 Aligned_cols=241 Identities=15% Similarity=0.122 Sum_probs=143.7
Q ss_pred CCcceEEEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC
Q 000272 182 GKLEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPL 261 (1744)
Q Consensus 182 p~V~YeRe~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpl 261 (1744)
+.++--+.+++.-+|.+|. .|+.-+. .+.+..|.||-.||..|+.... ..+. .....||.|+++|-||.|.+..
T Consensus 52 ~~ve~ydvTf~g~~g~rI~-gwlvlP~--~~~~~~P~vV~fhGY~g~~g~~--~~~l-~wa~~Gyavf~MdvRGQg~~~~ 125 (321)
T COG3458 52 PRVEVYDVTFTGYGGARIK-GWLVLPR--HEKGKLPAVVQFHGYGGRGGEW--HDML-HWAVAGYAVFVMDVRGQGSSSQ 125 (321)
T ss_pred CceEEEEEEEeccCCceEE-EEEEeec--ccCCccceEEEEeeccCCCCCc--cccc-cccccceeEEEEecccCCCccc
Confidence 4455556778888999998 5665332 1236789999999986544321 1222 3456899999999999998832
Q ss_pred CC--------------------CCCC-CcCcHHHHHHHHHHHHhhCC--CCcEEEEEecHHHHHHHHHHHHhCCCCCceE
Q 000272 262 TT--------------------SRLF-TAADSDDICTAIQFIGKARP--WTTLMSVGWGYGANMLTKYLAEVGERTPLTA 318 (1744)
Q Consensus 262 ts--------------------prly-~ag~tdDL~aaId~LrkryP--~spIvLVGhSMGG~IaL~YLae~ge~s~L~A 318 (1744)
.+ +..| .-+...|+..+++.+...++ ..+|.+.|.|-||+|++..++-.+ ++++
T Consensus 126 dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~---rik~ 202 (321)
T COG3458 126 DTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP---RIKA 202 (321)
T ss_pred cCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh---hhhc
Confidence 11 1111 12345799999998877654 469999999999999998887644 5888
Q ss_pred EEEecCCCChhhhhccCchhHHhHHHHHHHHHHHHHhhhhhhhccCCCcCHHHHhhhhcHHHHHHHHhhhccchhhHHHH
Q 000272 319 VTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDF 398 (1744)
Q Consensus 319 aVlISpP~Dl~es~~slp~~~ly~~~L~~~Lk~~L~r~~~lf~~~~~~~Did~vlkarTirEFDd~~tap~~Gf~sv~eY 398 (1744)
++++-|-+.-..-...+.-..-| ..+.+++++|... +..--.++.-||
T Consensus 203 ~~~~~Pfl~df~r~i~~~~~~~y-----dei~~y~k~h~~~-----------e~~v~~TL~yfD---------------- 250 (321)
T COG3458 203 VVADYPFLSDFPRAIELATEGPY-----DEIQTYFKRHDPK-----------EAEVFETLSYFD---------------- 250 (321)
T ss_pred ccccccccccchhheeecccCcH-----HHHHHHHHhcCch-----------HHHHHHHHhhhh----------------
Confidence 88775544222111000000001 1223344433210 111112233222
Q ss_pred HhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcC-CCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHH
Q 000272 399 YSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAEN-PFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAV 475 (1744)
Q Consensus 399 Y~~aS~~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la~~n-Pnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av 475 (1744)
..+..++|++|+|+.-| .|++|||.+.- ...... ....+.+++.-.|-.... +..+.+..|+...
T Consensus 251 -----~~n~A~RiK~pvL~svgL~D~vcpPstqF-A~yN~l~~~K~i~iy~~~aHe~~p~------~~~~~~~~~l~~l 317 (321)
T COG3458 251 -----IVNLAARIKVPVLMSVGLMDPVCPPSTQF-AAYNALTTSKTIEIYPYFAHEGGPG------FQSRQQVHFLKIL 317 (321)
T ss_pred -----hhhHHHhhccceEEeecccCCCCCChhhH-HHhhcccCCceEEEeeccccccCcc------hhHHHHHHHHHhh
Confidence 23446689999999999 99999986532 112222 234567777655644443 3456677787643
No 94
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.79 E-value=3.5e-08 Score=121.39 Aligned_cols=109 Identities=15% Similarity=0.231 Sum_probs=78.3
Q ss_pred CCcEEEEEcCCCCCc-hhHHHHHHHHHHHh--CCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhh--CCCC
Q 000272 215 LDTTLLLVPGTAEGS-IEKRIRLFVCEALR--RGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKA--RPWT 289 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS-~~sYIr~La~~La~--~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~Lrkr--yP~s 289 (1744)
.+|++|++|||.+.. ...|+..++..+.. ..|+|+++|+||+|.+.......+.....+++.++|+++... ++..
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~ 119 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWD 119 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 468999999996533 24466667766653 369999999999998754322222222346788888888644 3457
Q ss_pred cEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCC
Q 000272 290 TLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNP 325 (1744)
Q Consensus 290 pIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP 325 (1744)
++++|||||||.++..++...+. +|.+++++.|.
T Consensus 120 ~VhLIGHSLGAhIAg~ag~~~p~--rV~rItgLDPA 153 (442)
T TIGR03230 120 NVHLLGYSLGAHVAGIAGSLTKH--KVNRITGLDPA 153 (442)
T ss_pred cEEEEEECHHHHHHHHHHHhCCc--ceeEEEEEcCC
Confidence 99999999999999988776654 58888888653
No 95
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.76 E-value=5.8e-08 Score=113.81 Aligned_cols=242 Identities=16% Similarity=0.253 Sum_probs=97.2
Q ss_pred CcEEEEEcCCCCCchh-HHHHHHHHHHHhCCcEEEEEcCCC----CCCCCCCCCCCCCcCcHHHHHHHHHHHHhhC----
Q 000272 216 DTTLLLVPGTAEGSIE-KRIRLFVCEALRRGFFPVVMNPRG----CGGSPLTTSRLFTAADSDDICTAIQFIGKAR---- 286 (1744)
Q Consensus 216 ~P~VVLLHGltGGS~~-sYIr~La~~La~~GYrVVVfD~RG----hGgSpltsprly~ag~tdDL~aaId~Lrkry---- 286 (1744)
+..||++.|++.|-.+ .|+..++..+...||.++-+.++- +|-+. ...+++|+.++|+|++...
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~S-------L~~D~~eI~~~v~ylr~~~~g~~ 105 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSS-------LDRDVEEIAQLVEYLRSEKGGHF 105 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S---------HHHHHHHHHHHHHHHHHHS----
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcch-------hhhHHHHHHHHHHHHHHhhcccc
Confidence 4589999999877655 589999999988999999999863 33221 1246799999999999874
Q ss_pred CCCcEEEEEecHHHHHHHHHHHHhCC---CCCceEEEEecCCCChhhhhccCchhHHhHHHHHHHHHHHHHhh--hhhhh
Q 000272 287 PWTTLMSVGWGYGANMLTKYLAEVGE---RTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSN--KELFK 361 (1744)
Q Consensus 287 P~spIvLVGhSMGG~IaL~YLae~ge---~s~L~AaVlISpP~Dl~es~~slp~~~ly~~~L~~~Lk~~L~r~--~~lf~ 361 (1744)
...+|+++|||.|-.-++.|+..... ..+|.++|+-+|.-|.............+.+.+.. -++.+... ..+++
T Consensus 106 ~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~-A~~~i~~g~~~~~lp 184 (303)
T PF08538_consen 106 GREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVAL-AKELIAEGKGDEILP 184 (303)
T ss_dssp --S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHH-HHHHHHCT-TT-GG-
T ss_pred CCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHH-HHHHHHcCCCCceee
Confidence 46799999999999999999988653 45799999999887765432110000111111110 01111110 01111
Q ss_pred ccCCC-cCHHHHhhhhcHHHHHHHHhhhccchhhHHHHHhhc----CcchhcCcCCccEEEEEe-CCCCCCCCChHHHHH
Q 000272 362 GRAKG-FDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKS----STRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSI 435 (1744)
Q Consensus 362 ~~~~~-~Did~vlkarTirEFDd~~tap~~Gf~sv~eYY~~a----S~~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la 435 (1744)
..... +-.+ ..-+.+.|-.. ......+|||... .....+..|++|+|++.+ .|..||...-...+.
T Consensus 185 ~~~~~~~~~~---~PiTA~Rf~SL-----~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll 256 (303)
T PF08538_consen 185 REFTPLVFYD---TPITAYRFLSL-----ASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALL 256 (303)
T ss_dssp ---GGTTT-S---S---HHHHHT------S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT------------
T ss_pred ccccccccCC---CcccHHHHHhc-----cCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceecccccccccc
Confidence 10000 0000 01111222111 1111345555431 223568899999999999 999998632111111
Q ss_pred hc-----CCC---eEEEEecCCCccccCCCC-chhHHHHHHHHHHHH
Q 000272 436 AE-----NPF---TSLLLCSCLPSSVIGGGR-AAESWCQNLVIEWLS 473 (1744)
Q Consensus 436 ~~-----nPn---v~LvLt~gGHH~gF~e~~-~~~sWv~r~VlEFL~ 473 (1744)
++ .+. ..-.+++|+.|..-.... .+..|+.++|..||+
T Consensus 257 ~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 257 ERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp -----------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 11 111 124578898885443322 235588888888874
No 96
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.74 E-value=2.6e-08 Score=116.02 Aligned_cols=109 Identities=12% Similarity=0.103 Sum_probs=77.0
Q ss_pred CCcEEEEEcCCCCCchhHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCCCCCCCc-CcHHHHHHHHHHHHhh--CCCCc
Q 000272 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALR-RGFFPVVMNPRGCGGSPLTTSRLFTA-ADSDDICTAIQFIGKA--RPWTT 290 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sYIr~La~~La~-~GYrVVVfD~RGhGgSpltsprly~a-g~tdDL~aaId~Lrkr--yP~sp 290 (1744)
..|++|++|||.+.....|...++..++. .+|+|+++|++|++..... ...+.. ...+++..+|+++.+. .+..+
T Consensus 35 ~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~-~a~~~~~~v~~~la~~l~~L~~~~g~~~~~ 113 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYP-QAVNNTRVVGAELAKFLDFLVDNTGLSLEN 113 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChH-HHHHhHHHHHHHHHHHHHHHHHhcCCChHH
Confidence 46899999999654434566666665554 6899999999998432111 000111 1236888889988775 34568
Q ss_pred EEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCC
Q 000272 291 LMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPF 326 (1744)
Q Consensus 291 IvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~ 326 (1744)
+++|||||||.++..++...++ ++.+++.+.+..
T Consensus 114 i~lIGhSlGa~vAg~~a~~~~~--~v~~iv~LDPa~ 147 (275)
T cd00707 114 VHLIGHSLGAHVAGFAGKRLNG--KLGRITGLDPAG 147 (275)
T ss_pred EEEEEecHHHHHHHHHHHHhcC--ccceeEEecCCc
Confidence 9999999999999998888765 688888886553
No 97
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.72 E-value=1.3e-07 Score=118.15 Aligned_cols=140 Identities=17% Similarity=0.047 Sum_probs=102.4
Q ss_pred ceEEEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCch---hHHHHHHHH---HHHhCCcEEEEEcCCCCCC
Q 000272 185 EYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSI---EKRIRLFVC---EALRRGFFPVVMNPRGCGG 258 (1744)
Q Consensus 185 ~YeRe~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~---~sYIr~La~---~La~~GYrVVVfD~RGhGg 258 (1744)
-++.+.++|.||.+|+.|.+.|. ..+..|+++..+-++=... ......+.. .++.+||.||..|-||+|+
T Consensus 18 ~~~~v~V~MRDGvrL~~dIy~Pa----~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~ 93 (563)
T COG2936 18 IERDVMVPMRDGVRLAADIYRPA----GAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGG 93 (563)
T ss_pred eeeeeeEEecCCeEEEEEEEccC----CCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEeccccccc
Confidence 34567799999999999987763 2356788888871110111 011223334 5788999999999999999
Q ss_pred CCCCCCCCCCcCcHHHHHHHHHHHHhh-CCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhh
Q 000272 259 SPLTTSRLFTAADSDDICTAIQFIGKA-RPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEA 331 (1744)
Q Consensus 259 Spltsprly~ag~tdDL~aaId~Lrkr-yP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es 331 (1744)
|.......++ ...+|-..+|++|.++ +-+.++..+|.|++|...+..|+..+. .+++++..++.+|....
T Consensus 94 SeG~~~~~~~-~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pP--aLkai~p~~~~~D~y~d 164 (563)
T COG2936 94 SEGVFDPESS-REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPP--ALKAIAPTEGLVDRYRD 164 (563)
T ss_pred CCcccceecc-ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCc--hheeecccccccccccc
Confidence 9876555555 5678999999999774 236799999999999998888887653 48888888888886543
No 98
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.71 E-value=2.5e-07 Score=103.41 Aligned_cols=181 Identities=15% Similarity=0.042 Sum_probs=93.0
Q ss_pred cCCCcEEEEEcCCCCCchhHHHHHHHH-HHHhCCcEEEEEcCCC------CCC---CC--CCCCCCCCcCcHHHH-----
Q 000272 213 HGLDTTLLLVPGTAEGSIEKRIRLFVC-EALRRGFFPVVMNPRG------CGG---SP--LTTSRLFTAADSDDI----- 275 (1744)
Q Consensus 213 ~g~~P~VVLLHGltGGS~~sYIr~La~-~La~~GYrVVVfD~RG------hGg---Sp--ltsprly~ag~tdDL----- 275 (1744)
....++||+|||+ |++. ..+..+.. .+.....+++.++-+- .|. +- ..........+.+++
T Consensus 11 ~~~~~lvi~LHG~-G~~~-~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~ 88 (216)
T PF02230_consen 11 GKAKPLVILLHGY-GDSE-DLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAE 88 (216)
T ss_dssp ST-SEEEEEE--T-TS-H-HHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHH
T ss_pred CCCceEEEEECCC-CCCc-chhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHH
Confidence 3457899999997 5555 33323332 2233567788776642 121 10 000000000122333
Q ss_pred --HHHHHHHHhh-CCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHhHHHHHHHHHHH
Q 000272 276 --CTAIQFIGKA-RPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDI 352 (1744)
Q Consensus 276 --~aaId~Lrkr-yP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly~~~L~~~Lk~~ 352 (1744)
.++|+...+. .+..++++.|||.||++++.++.+++. ++.+++++|+.+-.....
T Consensus 89 ~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~--~~~gvv~lsG~~~~~~~~-------------------- 146 (216)
T PF02230_consen 89 RLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPE--PLAGVVALSGYLPPESEL-------------------- 146 (216)
T ss_dssp HHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSS--TSSEEEEES---TTGCCC--------------------
T ss_pred HHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCc--CcCEEEEeeccccccccc--------------------
Confidence 3334432222 356799999999999999999998876 688999887643221000
Q ss_pred HHhhhhhhhccCCCcCHHHHhhhhcHHHHHHHHhhhccchhhHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCCh-
Q 000272 353 LRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSI- 430 (1744)
Q Consensus 353 L~r~~~lf~~~~~~~Did~vlkarTirEFDd~~tap~~Gf~sv~eYY~~aS~~~~L~~IkVPVLIIhG-DDp~VP~~ai- 430 (1744)
. ....... ++|++++|| +|+++|....
T Consensus 147 --------~-----------------------------------------~~~~~~~--~~pi~~~hG~~D~vvp~~~~~ 175 (216)
T PF02230_consen 147 --------E-----------------------------------------DRPEALA--KTPILIIHGDEDPVVPFEWAE 175 (216)
T ss_dssp --------H-----------------------------------------CCHCCCC--TS-EEEEEETT-SSSTHHHHH
T ss_pred --------c-----------------------------------------ccccccC--CCcEEEEecCCCCcccHHHHH
Confidence 0 0000111 689999999 9999996432
Q ss_pred --HHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHH
Q 000272 431 --PRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAV 475 (1744)
Q Consensus 431 --p~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av 475 (1744)
...+.+...++++..+++++|..-. . ..+.+.+||+..
T Consensus 176 ~~~~~L~~~~~~v~~~~~~g~gH~i~~-----~--~~~~~~~~l~~~ 215 (216)
T PF02230_consen 176 KTAEFLKAAGANVEFHEYPGGGHEISP-----E--ELRDLREFLEKH 215 (216)
T ss_dssp HHHHHHHCTT-GEEEEEETT-SSS--H-----H--HHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEEcCCCCCCCCH-----H--HHHHHHHHHhhh
Confidence 2223344557999999988874322 2 346788888753
No 99
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.67 E-value=4.7e-08 Score=107.36 Aligned_cols=102 Identities=19% Similarity=0.176 Sum_probs=70.6
Q ss_pred EEEEcCCCCC--chhHHHHHHHHHHH-hCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhh-----CCCCc
Q 000272 219 LLLVPGTAEG--SIEKRIRLFVCEAL-RRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKA-----RPWTT 290 (1744)
Q Consensus 219 VVLLHGltGG--S~~sYIr~La~~La-~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~Lrkr-----yP~sp 290 (1744)
||++||+..- +... ...++..++ +.||.|+++|||=+ |..-.....+|+.++++|+.++ +...+
T Consensus 1 v~~~HGGg~~~g~~~~-~~~~~~~la~~~g~~v~~~~Yrl~-------p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~ 72 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKES-HWPFAARLAAERGFVVVSIDYRLA-------PEAPFPAALEDVKAAYRWLLKNADKLGIDPER 72 (211)
T ss_dssp EEEE--STTTSCGTTT-HHHHHHHHHHHHTSEEEEEE---T-------TTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CEEECCcccccCChHH-HHHHHHHHHhhccEEEEEeecccc-------ccccccccccccccceeeeccccccccccccc
Confidence 7899985332 2222 345555555 48999999999932 2222234579999999999887 55679
Q ss_pred EEEEEecHHHHHHHHHHHHhCCC--CCceEEEEecCCCCh
Q 000272 291 LMSVGWGYGANMLTKYLAEVGER--TPLTAVTCIDNPFDL 328 (1744)
Q Consensus 291 IvLVGhSMGG~IaL~YLae~ge~--s~L~AaVlISpP~Dl 328 (1744)
++++|+|.||++++.++....+. ..+++++++++..|+
T Consensus 73 i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 73 IVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred eEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 99999999999999998764432 358999999997776
No 100
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.66 E-value=6.6e-07 Score=106.61 Aligned_cols=112 Identities=16% Similarity=0.140 Sum_probs=76.4
Q ss_pred CCcEEEEEcCCCCCchhH---------HHHHHHH---HHHhCCcEEEEEcCCCCC-CCCCC--C-C--CCCCc----CcH
Q 000272 215 LDTTLLLVPGTAEGSIEK---------RIRLFVC---EALRRGFFPVVMNPRGCG-GSPLT--T-S--RLFTA----ADS 272 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~s---------YIr~La~---~La~~GYrVVVfD~RGhG-gSplt--s-p--rly~a----g~t 272 (1744)
....||+|||++|.++.. ||..++- .+--.-|.|+++|.-|.+ +|..+ . + +.|.. -..
T Consensus 50 ~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti 129 (368)
T COG2021 50 KDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITI 129 (368)
T ss_pred CCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccH
Confidence 356899999998754432 4444431 122234999999999876 55222 1 1 12222 235
Q ss_pred HHHHHHHHHHHhhCCCCcEE-EEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCCh
Q 000272 273 DDICTAIQFIGKARPWTTLM-SVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDL 328 (1744)
Q Consensus 273 dDL~aaId~LrkryP~spIv-LVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl 328 (1744)
+|...+-..+.++.+..++. +||-||||+.++.++..+|+ .+..++.++.+...
T Consensus 130 ~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd--~V~~~i~ia~~~r~ 184 (368)
T COG2021 130 RDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPD--RVRRAIPIATAARL 184 (368)
T ss_pred HHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChH--HHhhhheecccccC
Confidence 67777777777888888886 89999999999999999987 46677777655443
No 101
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.62 E-value=8.1e-07 Score=100.45 Aligned_cols=229 Identities=16% Similarity=0.191 Sum_probs=112.5
Q ss_pred EEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCC-CCCCCCCCCCC
Q 000272 189 VCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGC-GGSPLTTSRLF 267 (1744)
Q Consensus 189 e~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGh-GgSpltsprly 267 (1744)
..+.+.||..|.+ |...|. .......++||+.+|+ +-.+..| ..++.+++..||+|+.||.--| |.|.+.-..+.
T Consensus 5 hvi~~~~~~~I~v-wet~P~-~~~~~~~~tiliA~Gf-~rrmdh~-agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eft 80 (294)
T PF02273_consen 5 HVIRLEDGRQIRV-WETRPK-NNEPKRNNTILIAPGF-ARRMDHF-AGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFT 80 (294)
T ss_dssp EEEEETTTEEEEE-EEE----TTS---S-EEEEE-TT--GGGGGG-HHHHHHHHTTT--EEEE---B-------------
T ss_pred ceeEcCCCCEEEE-eccCCC-CCCcccCCeEEEecch-hHHHHHH-HHHHHHHhhCCeEEEeccccccccCCCCChhhcc
Confidence 5678899999987 765443 1233456899999998 4455554 4889999999999999999877 55654433332
Q ss_pred CcCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHhHHHHHH
Q 000272 268 TAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLAN 347 (1744)
Q Consensus 268 ~ag~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly~~~L~~ 347 (1744)
...-..|+..+++|++ +.+..++.++.-|+-|-|++..+++- .+.-+++.-...++..+.. +
T Consensus 81 ms~g~~sL~~V~dwl~-~~g~~~~GLIAaSLSaRIAy~Va~~i----~lsfLitaVGVVnlr~TLe-------------~ 142 (294)
T PF02273_consen 81 MSIGKASLLTVIDWLA-TRGIRRIGLIAASLSARIAYEVAADI----NLSFLITAVGVVNLRDTLE-------------K 142 (294)
T ss_dssp HHHHHHHHHHHHHHHH-HTT---EEEEEETTHHHHHHHHTTTS------SEEEEES--S-HHHHHH-------------H
T ss_pred hHHhHHHHHHHHHHHH-hcCCCcchhhhhhhhHHHHHHHhhcc----CcceEEEEeeeeeHHHHHH-------------H
Confidence 2233589999999999 55667899999999999999998753 2444555445555544321 1
Q ss_pred HHH-HHHHhhhhhhhccCCCcCHHHHhhhhcHHHHHHHHhhhccchhhHHHHHhhcCcchhcCcCCccEEEEEe-CCCCC
Q 000272 348 GLI-DILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAV 425 (1744)
Q Consensus 348 ~Lk-~~L~r~~~lf~~~~~~~Did~vlkarTirEFDd~~tap~~Gf~sv~eYY~~aS~~~~L~~IkVPVLIIhG-DDp~V 425 (1744)
.+. .++......++. ..|.+... .. ..-|-.. |--.||.+.+ |....+.++.+|++.++| +|..|
T Consensus 143 al~~Dyl~~~i~~lp~---dldfeGh~-l~-~~vFv~d--c~e~~w~~l~------ST~~~~k~l~iP~iaF~A~~D~WV 209 (294)
T PF02273_consen 143 ALGYDYLQLPIEQLPE---DLDFEGHN-LG-AEVFVTD--CFEHGWDDLD------STINDMKRLSIPFIAFTANDDDWV 209 (294)
T ss_dssp HHSS-GGGS-GGG--S---EEEETTEE-EE-HHHHHHH--HHHTT-SSHH------HHHHHHTT--S-EEEEEETT-TTS
T ss_pred HhccchhhcchhhCCC---cccccccc-cc-hHHHHHH--HHHcCCccch------hHHHHHhhCCCCEEEEEeCCCccc
Confidence 110 111111111111 11111000 00 0112111 1123444332 345678889999999999 88888
Q ss_pred CCCChHHHH-HhcCCCeEEEEecCCCcc
Q 000272 426 PPFSIPRSS-IAENPFTSLLLCSCLPSS 452 (1744)
Q Consensus 426 P~~aip~~l-a~~nPnv~LvLt~gGHH~ 452 (1744)
-...+.... ....+.+++...+|..|-
T Consensus 210 ~q~eV~~~~~~~~s~~~klysl~Gs~Hd 237 (294)
T PF02273_consen 210 KQSEVEELLDNINSNKCKLYSLPGSSHD 237 (294)
T ss_dssp -HHHHHHHHTT-TT--EEEEEETT-SS-
T ss_pred cHHHHHHHHHhcCCCceeEEEecCccch
Confidence 654443221 124567788888898883
No 102
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.61 E-value=1.1e-07 Score=108.76 Aligned_cols=104 Identities=19% Similarity=0.235 Sum_probs=72.3
Q ss_pred CCcEEEEEcCCCCCchhHHHHHHHHHHH-hCCcEEEEEcCCCCCCCCCCCCCCCCcC-cHHHHHHHHHHHHhhCCCCcEE
Q 000272 215 LDTTLLLVPGTAEGSIEKRIRLFVCEAL-RRGFFPVVMNPRGCGGSPLTTSRLFTAA-DSDDICTAIQFIGKARPWTTLM 292 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sYIr~La~~La-~~GYrVVVfD~RGhGgSpltsprly~ag-~tdDL~aaId~LrkryP~spIv 292 (1744)
.+|.++++||. |.|.-+ +-.++..+. ....+|+++|+||||.+.......+... ...|+-++|.++-...+ .+++
T Consensus 73 ~gpil~l~HG~-G~S~LS-fA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~-~~ii 149 (343)
T KOG2564|consen 73 EGPILLLLHGG-GSSALS-FAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELP-PQII 149 (343)
T ss_pred CccEEEEeecC-cccchh-HHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCC-CceE
Confidence 47889999995 444444 446666554 3468899999999999977665554433 34788888877743333 4799
Q ss_pred EEEecHHHHHHHHHHHHhCCCCCceEEEEe
Q 000272 293 SVGWGYGANMLTKYLAEVGERTPLTAVTCI 322 (1744)
Q Consensus 293 LVGhSMGG~IaL~YLae~ge~s~L~AaVlI 322 (1744)
+|||||||.|+...+...- -..+.|++.|
T Consensus 150 lVGHSmGGaIav~~a~~k~-lpsl~Gl~vi 178 (343)
T KOG2564|consen 150 LVGHSMGGAIAVHTAASKT-LPSLAGLVVI 178 (343)
T ss_pred EEeccccchhhhhhhhhhh-chhhhceEEE
Confidence 9999999999977665532 1236666666
No 103
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.57 E-value=1.9e-06 Score=101.47 Aligned_cols=130 Identities=15% Similarity=0.105 Sum_probs=90.1
Q ss_pred EcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCC--CchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCc
Q 000272 192 NTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAE--GSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTA 269 (1744)
Q Consensus 192 ~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltG--GS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~a 269 (1744)
...++..+.++++.+. .......|+||++||+.. |+...+.......+...||.|+++|||=.- .....
T Consensus 57 ~~~~~~~~~~~~y~p~--~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaP-------e~~~p 127 (312)
T COG0657 57 AGPSGDGVPVRVYRPD--RKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAP-------EHPFP 127 (312)
T ss_pred cCCCCCceeEEEECCC--CCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCC-------CCCCC
Confidence 3445555778888761 112335799999998522 122333345566778899999999998432 22223
Q ss_pred CcHHHHHHHHHHHHhhC-----CCCcEEEEEecHHHHHHHHHHHHhCCC--CCceEEEEecCCCChhh
Q 000272 270 ADSDDICTAIQFIGKAR-----PWTTLMSVGWGYGANMLTKYLAEVGER--TPLTAVTCIDNPFDLEE 330 (1744)
Q Consensus 270 g~tdDL~aaId~Lrkry-----P~spIvLVGhSMGG~IaL~YLae~ge~--s~L~AaVlISpP~Dl~e 330 (1744)
...+|+.+++.++..+. ...+|.++|+|.||++++.++..-.+. ....+.+++++..|...
T Consensus 128 ~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 128 AALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred chHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc
Confidence 45789999999998663 246899999999999998887664332 34778888888878765
No 104
>KOG4130 consensus Prenyl protein protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.54 E-value=2e-06 Score=96.27 Aligned_cols=78 Identities=19% Similarity=0.114 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHHhhHHHHHhh-cCCchhhHHHHHHHhHhcC--------------------CcchHHHHHHHHHHHHH
Q 000272 1604 ATVVVLVEELLFRSWLPEEIAAD-LDYHRGIIISGLAFALSQR--------------------SPQAIPGLWLLSLALAG 1662 (1744)
Q Consensus 1604 allv~l~EELLFRG~L~~~L~~~-~g~~~AIIISSLLFALlHl--------------------sl~~~i~lfLlGLvLa~ 1662 (1744)
.+++|+.||++||..++..+... ++...|+.+.-++||+.|+ +..+|....++|..-+.
T Consensus 135 ~iiaPLtEElvfracmlp~~l~~~~s~l~avF~~PLfFGvAH~HHiyEqL~~g~~~~~~ilL~t~fQfsYTtlFG~yTaf 214 (291)
T KOG4130|consen 135 FIIAPLTEELVFRACMLPTYLNLIQSSLQAVFWQPLFFGVAHAHHIYEQLQEGSMTTVSILLTTCFQFSYTTLFGGYTAF 214 (291)
T ss_pred hhhccchHHHHHHHHHHHHHHHhhhcchhhHHHhhHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45569999999999999999887 8999999999999999998 12567888899998899
Q ss_pred HHHhcCCcchHHHHHHhHHh
Q 000272 1663 VRQRSQGSLSVPIGLRTGIM 1682 (1744)
Q Consensus 1663 aylrttGSLWlpIGLHagWn 1682 (1744)
++.| ||+||.||.+|+-=|
T Consensus 215 lF~r-Tghl~~~iLvHAfCN 233 (291)
T KOG4130|consen 215 LFVR-TGHLWCPILVHAFCN 233 (291)
T ss_pred Hhhh-cCCchHHHHHHHHHh
Confidence 9999 789999999998554
No 105
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.54 E-value=1.2e-06 Score=93.56 Aligned_cols=164 Identities=15% Similarity=0.167 Sum_probs=113.3
Q ss_pred CcEEEEEcCCCCCchhH-HHHHHHHHHHhCCcEEEEEcCCCCCCC--CCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEE
Q 000272 216 DTTLLLVPGTAEGSIEK-RIRLFVCEALRRGFFPVVMNPRGCGGS--PLTTSRLFTAADSDDICTAIQFIGKARPWTTLM 292 (1744)
Q Consensus 216 ~P~VVLLHGltGGS~~s-YIr~La~~La~~GYrVVVfD~RGhGgS--pltsprly~ag~tdDL~aaId~LrkryP~spIv 292 (1744)
..+||+.|| .|+++++ .+...+..++.+||.|+.|+++--..- ....|..-....-.....++..++...-..|++
T Consensus 14 ~~tilLaHG-AGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi 92 (213)
T COG3571 14 PVTILLAHG-AGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLI 92 (213)
T ss_pred CEEEEEecC-CCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCcee
Confidence 347888999 4777776 688888899999999999998532211 111111111112244566666777766566999
Q ss_pred EEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHhHHHHHHHHHHHHHhhhhhhhccCCCcCHHHH
Q 000272 293 SVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKA 372 (1744)
Q Consensus 293 LVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly~~~L~~~Lk~~L~r~~~lf~~~~~~~Did~v 372 (1744)
+-|+||||-++...+.+... +|.+.+|++-||....--..
T Consensus 93 ~GGkSmGGR~aSmvade~~A--~i~~L~clgYPfhppGKPe~-------------------------------------- 132 (213)
T COG3571 93 IGGKSMGGRVASMVADELQA--PIDGLVCLGYPFHPPGKPEQ-------------------------------------- 132 (213)
T ss_pred eccccccchHHHHHHHhhcC--CcceEEEecCccCCCCCccc--------------------------------------
Confidence 99999999999998887643 59999999877654211000
Q ss_pred hhhhcHHHHHHHHhhhccchhhHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCc
Q 000272 373 LSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPS 451 (1744)
Q Consensus 373 lkarTirEFDd~~tap~~Gf~sv~eYY~~aS~~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH 451 (1744)
+ ....|..+++|+||.|| .|++-..+.+. ....++.+++++..++.|
T Consensus 133 -----~-------------------------Rt~HL~gl~tPtli~qGtrD~fGtr~~Va--~y~ls~~iev~wl~~adH 180 (213)
T COG3571 133 -----L-------------------------RTEHLTGLKTPTLITQGTRDEFGTRDEVA--GYALSDPIEVVWLEDADH 180 (213)
T ss_pred -----c-------------------------hhhhccCCCCCeEEeecccccccCHHHHH--hhhcCCceEEEEeccCcc
Confidence 0 01346678999999999 99987755443 235678899999998888
Q ss_pred c
Q 000272 452 S 452 (1744)
Q Consensus 452 ~ 452 (1744)
-
T Consensus 181 D 181 (213)
T COG3571 181 D 181 (213)
T ss_pred c
Confidence 3
No 106
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.51 E-value=1.6e-06 Score=113.61 Aligned_cols=233 Identities=19% Similarity=0.178 Sum_probs=147.5
Q ss_pred CCcceEEEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchh---HHHHHHH-HHHHhCCcEEEEEcCCCCC
Q 000272 182 GKLEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIE---KRIRLFV-CEALRRGFFPVVMNPRGCG 257 (1744)
Q Consensus 182 p~V~YeRe~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~---sYIr~La-~~La~~GYrVVVfD~RGhG 257 (1744)
|...+.+..+ ||....+-...|++.. ....-|.||.+||+++ |.. .+.-.+. ..+...||.|+.+|.||.|
T Consensus 496 p~~~~~~i~~---~~~~~~~~~~lP~~~~-~~~kyPllv~~yGGP~-sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~ 570 (755)
T KOG2100|consen 496 PIVEFGKIEI---DGITANAILILPPNFD-PSKKYPLLVVVYGGPG-SQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSG 570 (755)
T ss_pred CcceeEEEEe---ccEEEEEEEecCCCCC-CCCCCCEEEEecCCCC-cceeeeeEEecHHHHhhccCCeEEEEEcCCCcC
Confidence 4455554444 7777666555554332 3346788999999764 221 1211222 2467789999999999999
Q ss_pred CCCCC----CCCCCCcCcHHHHHHHHHHHHhhC--CCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhh
Q 000272 258 GSPLT----TSRLFTAADSDDICTAIQFIGKAR--PWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEA 331 (1744)
Q Consensus 258 gSplt----sprly~ag~tdDL~aaId~Lrkry--P~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es 331 (1744)
+-... .++-......+|...++.++.+.. ...++.++|||.||.++++.++..+. ..++++++++|..|+. .
T Consensus 571 ~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~-~~fkcgvavaPVtd~~-~ 648 (755)
T KOG2100|consen 571 GYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPG-DVFKCGVAVAPVTDWL-Y 648 (755)
T ss_pred CcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcC-ceEEEEEEecceeeee-e
Confidence 76432 122333346789999999887654 23589999999999999999988653 3577779998887765 1
Q ss_pred hccCchhHHhHHHHHHHHHHHHHhhhhhhhccCCCcCHHHHhhhhcHHHHHHHHhhhccchhh-HHHHHhhcCcchhcCc
Q 000272 332 TRSSPHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEA-IEDFYSKSSTRSVVGN 410 (1744)
Q Consensus 332 ~~slp~~~ly~~~L~~~Lk~~L~r~~~lf~~~~~~~Did~vlkarTirEFDd~~tap~~Gf~s-v~eYY~~aS~~~~L~~ 410 (1744)
..+ ..+. + + .|+.+ ...-|.+.+....+..
T Consensus 649 yds---------~~te-------r-----------------------------y----mg~p~~~~~~y~e~~~~~~~~~ 679 (755)
T KOG2100|consen 649 YDS---------TYTE-------R-----------------------------Y----MGLPSENDKGYEESSVSSPANN 679 (755)
T ss_pred ecc---------cccH-------h-----------------------------h----cCCCccccchhhhccccchhhh
Confidence 111 0000 0 0 01110 0111566667777788
Q ss_pred CCccE-EEEEe-CCCCCCCCChH---HHHH-hcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHH
Q 000272 411 IKIPV-LFIQN-DAGAVPPFSIP---RSSI-AENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLS 473 (1744)
Q Consensus 411 IkVPV-LIIhG-DDp~VP~~aip---~~la-~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~ 473 (1744)
++.|. |+||| .|+-|+.+... ..+. +..+ +++.++|+-.|...... ....+...+..||.
T Consensus 680 ~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~-~~~~vypde~H~is~~~--~~~~~~~~~~~~~~ 745 (755)
T KOG2100|consen 680 IKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVP-FRLLVYPDENHGISYVE--VISHLYEKLDRFLR 745 (755)
T ss_pred hccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCc-eEEEEeCCCCccccccc--chHHHHHHHHHHHH
Confidence 88887 99999 88888754321 1222 2345 88999999999666642 22345578888887
No 107
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.49 E-value=7e-06 Score=95.25 Aligned_cols=132 Identities=15% Similarity=0.200 Sum_probs=86.8
Q ss_pred EEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcC
Q 000272 191 VNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAA 270 (1744)
Q Consensus 191 L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag 270 (1744)
+...+|..+.++-..... .+......+||-+||-+ ||+.. ++.+...|.+.|.|++..|+||+|.++......|+..
T Consensus 11 ~~~~~~~~~~~~a~y~D~-~~~gs~~gTVv~~hGsP-GSH~D-FkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~ 87 (297)
T PF06342_consen 11 FQAENGKIVTVQAVYEDS-LPSGSPLGTVVAFHGSP-GSHND-FKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNE 87 (297)
T ss_pred cccccCceEEEEEEEEec-CCCCCCceeEEEecCCC-CCccc-hhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChH
Confidence 455677777765322111 12233455899999975 56655 4566778899999999999999999876544444322
Q ss_pred c-HHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCC-CChhhhh
Q 000272 271 D-SDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNP-FDLEEAT 332 (1744)
Q Consensus 271 ~-tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP-~Dl~es~ 332 (1744)
. ..=+.++++.+.- ..+++++|||.|+-.++..+..+ +..++++++++ +....+.
T Consensus 88 er~~~~~~ll~~l~i---~~~~i~~gHSrGcenal~la~~~----~~~g~~lin~~G~r~HkgI 144 (297)
T PF06342_consen 88 ERQNFVNALLDELGI---KGKLIFLGHSRGCENALQLAVTH----PLHGLVLINPPGLRPHKGI 144 (297)
T ss_pred HHHHHHHHHHHHcCC---CCceEEEEeccchHHHHHHHhcC----ccceEEEecCCccccccCc
Confidence 1 2233344444432 36899999999999999999887 36688888654 3444433
No 108
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.48 E-value=6.5e-07 Score=107.82 Aligned_cols=253 Identities=17% Similarity=0.174 Sum_probs=144.8
Q ss_pred CCcEEEEEcCCCCCchhHH------HHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcH-HHHHHHHHHHHhhCC
Q 000272 215 LDTTLLLVPGTAEGSIEKR------IRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADS-DDICTAIQFIGKARP 287 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sY------Ir~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~t-dDL~aaId~LrkryP 287 (1744)
-.++++++|-+.. ..| -+.++..++++|+.|+++++|+=..+.. .+.+ ..+. +++.++|+.+++..+
T Consensus 106 ~~~PlLiVpP~iN---k~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~--~~~~-edYi~e~l~~aid~v~~itg 179 (445)
T COG3243 106 LKRPLLIVPPWIN---KFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA--AKNL-EDYILEGLSEAIDTVKDITG 179 (445)
T ss_pred CCCceEeeccccC---ceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh--hccH-HHHHHHHHHHHHHHHHHHhC
Confidence 3578999998742 334 3567899999999999999986544321 1111 1233 788899999999888
Q ss_pred CCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhcc-CchhHHhHHHHHHHHH-------HHHHhhhhh
Q 000272 288 WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRS-SPHHIALDEKLANGLI-------DILRSNKEL 359 (1744)
Q Consensus 288 ~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~s-lp~~~ly~~~L~~~Lk-------~~L~r~~~l 359 (1744)
...|.++||+.||+++..+++.++.+ +++.++.+.+++|+...... .+.+...-..+...+. ..+..-..+
T Consensus 180 ~~~InliGyCvGGtl~~~ala~~~~k-~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~m 258 (445)
T COG3243 180 QKDINLIGYCVGGTLLAAALALMAAK-RIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFL 258 (445)
T ss_pred ccccceeeEecchHHHHHHHHhhhhc-ccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHh
Confidence 88999999999999999999998765 69999999999998764321 1111100000000000 000000011
Q ss_pred hhcc--CCCcCHHHHhhhhcHHHHHHHH--------hhhccchhhHHHHHhhcC----------cchhcCcCCccEEEEE
Q 000272 360 FKGR--AKGFDVEKALSAKSVRDFEKAI--------SMVSYGFEAIEDFYSKSS----------TRSVVGNIKIPVLFIQ 419 (1744)
Q Consensus 360 f~~~--~~~~Did~vlkarTirEFDd~~--------tap~~Gf~sv~eYY~~aS----------~~~~L~~IkVPVLIIh 419 (1744)
+++. ...+.++..+..+....||-.+ ..+.+++ -..++|.... ..-.|++|+||++++.
T Consensus 259 Lrpndliw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~-~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~pvy~~a 337 (445)
T COG3243 259 LRPNDLIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSE-YLRNFYLENRLIRGGLEVSGTMVDLGDITCPVYNLA 337 (445)
T ss_pred cCccccchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHH-HHHHHHHhChhhccceEECCEEechhhcccceEEEe
Confidence 1100 0001111111111111122111 0111111 1223333321 1345899999999999
Q ss_pred e-CCCCCCCCChHHHHHhcCC-CeEEEEecCCCccccCCCCch---hHHH--HHHHHHHHHHHH
Q 000272 420 N-DAGAVPPFSIPRSSIAENP-FTSLLLCSCLPSSVIGGGRAA---ESWC--QNLVIEWLSAVE 476 (1744)
Q Consensus 420 G-DDp~VP~~aip~~la~~nP-nv~LvLt~gGHH~gF~e~~~~---~sWv--~r~VlEFL~av~ 476 (1744)
| +|.++|..++-. .....+ .+.+++.+.||-.+....+.. ..|. .....+|+....
T Consensus 338 ~~~DhI~P~~Sv~~-g~~l~~g~~~f~l~~sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a~ 400 (445)
T COG3243 338 AEEDHIAPWSSVYL-GARLLGGEVTFVLSRSGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGAK 400 (445)
T ss_pred ecccccCCHHHHHH-HHHhcCCceEEEEecCceEEEEeCCcchhhhhcCCCCcchHHHHHHhhc
Confidence 9 999999876643 233344 488888888888877764321 2231 225677776543
No 109
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.37 E-value=2.1e-06 Score=96.37 Aligned_cols=179 Identities=18% Similarity=0.229 Sum_probs=117.2
Q ss_pred cEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcC-CCCCCCCCCCC--------CCCCcCcHHHHHHHHHHHHhhCC
Q 000272 217 TTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNP-RGCGGSPLTTS--------RLFTAADSDDICTAIQFIGKARP 287 (1744)
Q Consensus 217 P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~-RGhGgSpltsp--------rly~ag~tdDL~aaId~LrkryP 287 (1744)
..||++--+. |-.....+..+..++..||.|+++|+ ||=-.++.... +........|+..++++|+.+.+
T Consensus 40 ~~li~i~Dvf-G~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~ 118 (242)
T KOG3043|consen 40 KVLIVIQDVF-GFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGD 118 (242)
T ss_pred eEEEEEEeee-ccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCC
Confidence 4566666553 34455688999999999999999998 55222221111 01111235799999999999888
Q ss_pred CCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHhHHHHHHHHHHHHHhhhhhhhccCCCc
Q 000272 288 WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRAKGF 367 (1744)
Q Consensus 288 ~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly~~~L~~~Lk~~L~r~~~lf~~~~~~~ 367 (1744)
...|.++|+.|||-++..|....+ .+.++++.-+.+
T Consensus 119 ~kkIGv~GfCwGak~vv~~~~~~~---~f~a~v~~hps~----------------------------------------- 154 (242)
T KOG3043|consen 119 SKKIGVVGFCWGAKVVVTLSAKDP---EFDAGVSFHPSF----------------------------------------- 154 (242)
T ss_pred cceeeEEEEeecceEEEEeeccch---hheeeeEecCCc-----------------------------------------
Confidence 899999999999988777766543 355555442111
Q ss_pred CHHHHhhhhcHHHHHHHHhhhccchhhHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHH--HHHhcCCCe--E
Q 000272 368 DVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPR--SSIAENPFT--S 442 (1744)
Q Consensus 368 Did~vlkarTirEFDd~~tap~~Gf~sv~eYY~~aS~~~~L~~IkVPVLIIhG-DDp~VP~~aip~--~la~~nPnv--~ 442 (1744)
.+ ...+.++++|+|++.| .|.++|+..+.. +..+.+|.+ +
T Consensus 155 -------------------------~d----------~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~ 199 (242)
T KOG3043|consen 155 -------------------------VD----------SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQ 199 (242)
T ss_pred -------------------------CC----------hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCccccee
Confidence 00 1234578899999999 799999865432 334556654 4
Q ss_pred EEEecCCCccccCCC-----Cc---hhHHHHHHHHHHHHHH
Q 000272 443 LLLCSCLPSSVIGGG-----RA---AESWCQNLVIEWLSAV 475 (1744)
Q Consensus 443 LvLt~gGHH~gF~e~-----~~---~~sWv~r~VlEFL~av 475 (1744)
+.++++-||++.... +. ......+.++.||..+
T Consensus 200 v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 200 VKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred EEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 889999999887522 11 1122346677777654
No 110
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.36 E-value=3.2e-06 Score=92.57 Aligned_cols=91 Identities=13% Similarity=0.042 Sum_probs=55.2
Q ss_pred EEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEEEEecH
Q 000272 219 LLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGWGY 298 (1744)
Q Consensus 219 VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIvLVGhSM 298 (1744)
|+++||+.++....|...+.+.+... ++|-..|+ . .| ..++....++..... ...+.++||||+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~----~----~P------~~~~W~~~l~~~i~~-~~~~~ilVaHSL 64 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW----D----NP------DLDEWVQALDQAIDA-IDEPTILVAHSL 64 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC------T----S--------HHHHHHHHHHCCHC--TTTEEEEEETH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc----C----CC------CHHHHHHHHHHHHhh-cCCCeEEEEeCH
Confidence 68999996655555666666676666 88887776 1 11 122333333221111 235799999999
Q ss_pred HHHHHHHHHHHhCCCCCceEEEEecCCC
Q 000272 299 GANMLTKYLAEVGERTPLTAVTCIDNPF 326 (1744)
Q Consensus 299 GG~IaL~YLae~ge~s~L~AaVlISpP~ 326 (1744)
|...+++|++. ....++.++++++++.
T Consensus 65 Gc~~~l~~l~~-~~~~~v~g~lLVAp~~ 91 (171)
T PF06821_consen 65 GCLTALRWLAE-QSQKKVAGALLVAPFD 91 (171)
T ss_dssp HHHHHHHHHHH-TCCSSEEEEEEES--S
T ss_pred HHHHHHHHHhh-cccccccEEEEEcCCC
Confidence 99999999973 3345899999998764
No 111
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.34 E-value=2.2e-06 Score=94.79 Aligned_cols=103 Identities=13% Similarity=0.146 Sum_probs=77.9
Q ss_pred cEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEEEEe
Q 000272 217 TTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGW 296 (1744)
Q Consensus 217 P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIvLVGh 296 (1744)
..+|++-|= | .....-+.++..|+++|+-|+.+|-+-+=-+. ++| .....|+..+|++..++++..+++++|+
T Consensus 3 t~~v~~SGD-g-Gw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~-rtP----~~~a~Dl~~~i~~y~~~w~~~~vvLiGY 75 (192)
T PF06057_consen 3 TLAVFFSGD-G-GWRDLDKQIAEALAKQGVPVVGVDSLRYFWSE-RTP----EQTAADLARIIRHYRARWGRKRVVLIGY 75 (192)
T ss_pred EEEEEEeCC-C-CchhhhHHHHHHHHHCCCeEEEechHHHHhhh-CCH----HHHHHHHHHHHHHHHHHhCCceEEEEee
Confidence 467888873 3 33456778999999999999999986554332 222 2236899999999999999899999999
Q ss_pred cHHHHHHHHHHHHhCCC--CCceEEEEecCCC
Q 000272 297 GYGANMLTKYLAEVGER--TPLTAVTCIDNPF 326 (1744)
Q Consensus 297 SMGG~IaL~YLae~ge~--s~L~AaVlISpP~ 326 (1744)
|+|+-++-....+.|.. ..|..++++++.-
T Consensus 76 SFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 76 SFGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred cCCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 99998887777666643 4588888886543
No 112
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.31 E-value=2.3e-05 Score=87.20 Aligned_cols=103 Identities=16% Similarity=0.183 Sum_probs=71.6
Q ss_pred cEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEEEEe
Q 000272 217 TTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGW 296 (1744)
Q Consensus 217 P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIvLVGh 296 (1744)
++|+++||. ||+...| +.+++.+...++.|+.+.++|.+... +.. ....+=+...++.|+...|..|++++||
T Consensus 1 ~~lf~~p~~-gG~~~~y-~~la~~l~~~~~~v~~i~~~~~~~~~---~~~--~si~~la~~y~~~I~~~~~~gp~~L~G~ 73 (229)
T PF00975_consen 1 RPLFCFPPA-GGSASSY-RPLARALPDDVIGVYGIEYPGRGDDE---PPP--DSIEELASRYAEAIRARQPEGPYVLAGW 73 (229)
T ss_dssp -EEEEESST-TCSGGGG-HHHHHHHTTTEEEEEEECSTTSCTTS---HEE--SSHHHHHHHHHHHHHHHTSSSSEEEEEE
T ss_pred CeEEEEcCC-ccCHHHH-HHHHHhCCCCeEEEEEEecCCCCCCC---CCC--CCHHHHHHHHHHHhhhhCCCCCeeehcc
Confidence 369999996 5565555 57887776556999999999997221 111 1112334556677888788889999999
Q ss_pred cHHHHHHHHHHHHhCCC-CCceEEEEecCCC
Q 000272 297 GYGANMLTKYLAEVGER-TPLTAVTCIDNPF 326 (1744)
Q Consensus 297 SMGG~IaL~YLae~ge~-s~L~AaVlISpP~ 326 (1744)
|+||.++...|.+-.+. ..+..++++.++.
T Consensus 74 S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 74 SFGGILAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp THHHHHHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred CccHHHHHHHHHHHHHhhhccCceEEecCCC
Confidence 99999999888664222 3477788887543
No 113
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.31 E-value=4.6e-06 Score=96.74 Aligned_cols=115 Identities=17% Similarity=0.253 Sum_probs=73.4
Q ss_pred CCcEEEEEcCCCCCchhHHHHHHHHHHH-hCCcE----EEEEcCCCCCCC----CC--CCCC---CCC-------cCcHH
Q 000272 215 LDTTLLLVPGTAEGSIEKRIRLFVCEAL-RRGFF----PVVMNPRGCGGS----PL--TTSR---LFT-------AADSD 273 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sYIr~La~~La-~~GYr----VVVfD~RGhGgS----pl--tspr---ly~-------ag~td 273 (1744)
...|.|++||+ +|+... ...|+..+. +.|.. ++.++.-|+=.. +. ..|- .|. .....
T Consensus 10 ~~tPTifihG~-~gt~~s-~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~ 87 (255)
T PF06028_consen 10 STTPTIFIHGY-GGTANS-FNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAK 87 (255)
T ss_dssp S-EEEEEE--T-TGGCCC-CHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHH
T ss_pred CCCcEEEECCC-CCChhH-HHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHH
Confidence 35689999998 444443 457788886 66643 444455553111 11 1110 010 11346
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCC---CceEEEEecCCCChhhh
Q 000272 274 DICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERT---PLTAVTCIDNPFDLEEA 331 (1744)
Q Consensus 274 DL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s---~L~AaVlISpP~Dl~es 331 (1744)
=+..+|.+|+++|...++.+|||||||..++.|+..++.+. .+...|.|++||+....
T Consensus 88 wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~ 148 (255)
T PF06028_consen 88 WLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILG 148 (255)
T ss_dssp HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTC
T ss_pred HHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCcccc
Confidence 68899999999999999999999999999999999987654 47999999999998654
No 114
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.31 E-value=5.3e-06 Score=102.80 Aligned_cols=236 Identities=14% Similarity=0.149 Sum_probs=140.7
Q ss_pred CCcceEE-EE--EEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCch--h-----HHHHHHHHHHHhCCcEEEEE
Q 000272 182 GKLEYQR-VC--VNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSI--E-----KRIRLFVCEALRRGFFPVVM 251 (1744)
Q Consensus 182 p~V~YeR-e~--L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~--~-----sYIr~La~~La~~GYrVVVf 251 (1744)
++..|-. ++ +++..|.+++.-.+.|.+.. .....|+|+.+-|+++-.- . .|+| .+.|+.+||.|+++
T Consensus 606 ~~Pdy~p~eif~fqs~tg~~lYgmiyKPhn~~-pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR--~~~LaslGy~Vv~I 682 (867)
T KOG2281|consen 606 PPPDYVPPEIFSFQSKTGLTLYGMIYKPHNFQ-PGKKYPTVLNVYGGPGVQLVNNSFKGIQYLR--FCRLASLGYVVVFI 682 (867)
T ss_pred CCCccCChhheeeecCCCcEEEEEEEccccCC-CCCCCceEEEEcCCCceEEeeccccceehhh--hhhhhhcceEEEEE
Confidence 4444543 44 46744545544455554332 2345789999999753211 1 1232 35788899999999
Q ss_pred cCCCCCCCCCCCCC----CCCcCcHHHHHHHHHHHHhhCC---CCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecC
Q 000272 252 NPRGCGGSPLTTSR----LFTAADSDDICTAIQFIGKARP---WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDN 324 (1744)
Q Consensus 252 D~RGhGgSpltspr----ly~ag~tdDL~aaId~LrkryP---~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISp 324 (1744)
|.||...-.++-.. -......+|-.+.++++..+++ -.++.+.|||+||.+.+..++++|+ .+++||+-+
T Consensus 683 DnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~--IfrvAIAGa- 759 (867)
T KOG2281|consen 683 DNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPN--IFRVAIAGA- 759 (867)
T ss_pred cCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcc--eeeEEeccC-
Confidence 99998644332111 1122346899999999998875 3599999999999999999999986 355554433
Q ss_pred CCChhhhhccCchhHHhHHHHHHHHHHHHHhhhhhhhccCCCcCHHHHhhhhcHHHHHHHHhhhccchh-hHHHHHhhcC
Q 000272 325 PFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFE-AIEDFYSKSS 403 (1744)
Q Consensus 325 P~Dl~es~~slp~~~ly~~~L~~~Lk~~L~r~~~lf~~~~~~~Did~vlkarTirEFDd~~tap~~Gf~-sv~eYY~~aS 403 (1744)
|...... |+-. +|.+.-|++ +.++-|...|
T Consensus 760 pVT~W~~---------YDTg----------------------------------------YTERYMg~P~~nE~gY~agS 790 (867)
T KOG2281|consen 760 PVTDWRL---------YDTG----------------------------------------YTERYMGYPDNNEHGYGAGS 790 (867)
T ss_pred cceeeee---------eccc----------------------------------------chhhhcCCCccchhcccchh
Confidence 3221111 1111 111112222 1122222222
Q ss_pred cc---hhcCcCCccEEEEEe-CCCCCCCCChH---HHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHH
Q 000272 404 TR---SVVGNIKIPVLFIQN-DAGAVPPFSIP---RSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSA 474 (1744)
Q Consensus 404 ~~---~~L~~IkVPVLIIhG-DDp~VP~~aip---~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~a 474 (1744)
.. ..+.+=.--+|++|| -|.-|...+.. -.+.+....-+|+++|.-.|..-. .+...+++..+..|++.
T Consensus 791 V~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~--~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 791 VAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRN--PESGIYYEARLLHFLQE 866 (867)
T ss_pred HHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCC--CccchhHHHHHHHHHhh
Confidence 22 223333345799999 78777654332 244566677799999998885433 23456788999999874
No 115
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.31 E-value=8.5e-07 Score=106.50 Aligned_cols=135 Identities=16% Similarity=0.106 Sum_probs=74.6
Q ss_pred EEEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHH-----------------HHHHHHHHHhCCcEEE
Q 000272 187 QRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKR-----------------IRLFVCEALRRGFFPV 249 (1744)
Q Consensus 187 eRe~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sY-----------------Ir~La~~La~~GYrVV 249 (1744)
++..|.+.++..+....+.|.. ..+.-|.||++||- |+..+.. -+.++.+|+++||-|+
T Consensus 89 EKv~f~~~p~~~vpaylLvPd~---~~~p~PAVL~lHgH-g~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvl 164 (390)
T PF12715_consen 89 EKVEFNTTPGSRVPAYLLVPDG---AKGPFPAVLCLHGH-GGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVL 164 (390)
T ss_dssp EEEEE--STTB-EEEEEEEETT-----S-EEEEEEE--T-T--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEE
T ss_pred EEEEEEccCCeeEEEEEEecCC---CCCCCCEEEEeCCC-CCCcccccCCcccccccchhhccccccHHHHHHhCCCEEE
Confidence 4555677788887765555432 13456889999995 3333221 1346789999999999
Q ss_pred EEcCCCCCCCCCCCCCC--CC------------cCc------HHHHHHHHHHHHhhCC--CCcEEEEEecHHHHHHHHHH
Q 000272 250 VMNPRGCGGSPLTTSRL--FT------------AAD------SDDICTAIQFIGKARP--WTTLMSVGWGYGANMLTKYL 307 (1744)
Q Consensus 250 VfD~RGhGgSpltsprl--y~------------ag~------tdDL~aaId~LrkryP--~spIvLVGhSMGG~IaL~YL 307 (1744)
++|.+|+|.-....... .+ .++ ..|...+++|+..+-- ..+|.++||||||..++..+
T Consensus 165 a~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~La 244 (390)
T PF12715_consen 165 APDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLA 244 (390)
T ss_dssp EE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHH
T ss_pred EEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHH
Confidence 99999999653221100 00 011 2344558999976532 35999999999999977776
Q ss_pred HHhCCCCCceEEEEecCCCCh
Q 000272 308 AEVGERTPLTAVTCIDNPFDL 328 (1744)
Q Consensus 308 ae~ge~s~L~AaVlISpP~Dl 328 (1744)
+-.. +|+++|..+.....
T Consensus 245 ALDd---RIka~v~~~~l~~~ 262 (390)
T PF12715_consen 245 ALDD---RIKATVANGYLCTT 262 (390)
T ss_dssp HH-T---T--EEEEES-B--H
T ss_pred Hcch---hhHhHhhhhhhhcc
Confidence 6632 58777776544333
No 116
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.29 E-value=2.8e-05 Score=86.49 Aligned_cols=92 Identities=12% Similarity=0.044 Sum_probs=57.5
Q ss_pred EEEEcCCCCCchhHHHHHHHHHHHhCCc--EEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEEEEe
Q 000272 219 LLLVPGTAEGSIEKRIRLFVCEALRRGF--FPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGW 296 (1744)
Q Consensus 219 VVLLHGltGGS~~sYIr~La~~La~~GY--rVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIvLVGh 296 (1744)
|+.+||+..+..+.-.+.+.+++.+.|. .+.++|++- ..++..+.+..+-...+...+.+||.
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~---------------~p~~a~~~l~~~i~~~~~~~~~liGS 66 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPP---------------FPEEAIAQLEQLIEELKPENVVLIGS 66 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCc---------------CHHHHHHHHHHHHHhCCCCCeEEEEE
Confidence 7899999654444445566667777653 445444431 12333344444334444445999999
Q ss_pred cHHHHHHHHHHHHhCCCCCceEEEEecCCCChhh
Q 000272 297 GYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEE 330 (1744)
Q Consensus 297 SMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~e 330 (1744)
||||..+..++.+++ +.+ |++.|.+....
T Consensus 67 SlGG~~A~~La~~~~----~~a-vLiNPav~p~~ 95 (187)
T PF05728_consen 67 SLGGFYATYLAERYG----LPA-VLINPAVRPYE 95 (187)
T ss_pred ChHHHHHHHHHHHhC----CCE-EEEcCCCCHHH
Confidence 999999987776664 444 88888776543
No 117
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.25 E-value=3.4e-06 Score=81.33 Aligned_cols=63 Identities=19% Similarity=0.201 Sum_probs=44.8
Q ss_pred CCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCc-CcHHHHHHHH
Q 000272 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTA-ADSDDICTAI 279 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~a-g~tdDL~aaI 279 (1744)
.+.+|+++||+.+ +......++..|+++||.|+++|+||||.|.......-.. ...+|+..++
T Consensus 15 ~k~~v~i~HG~~e--h~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 15 PKAVVVIVHGFGE--HSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CCEEEEEeCCcHH--HHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 4789999999843 3345678999999999999999999999997432221111 2245665554
No 118
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.25 E-value=2.6e-05 Score=93.25 Aligned_cols=105 Identities=15% Similarity=0.208 Sum_probs=74.1
Q ss_pred CCcEEEEEcCCCCCchhH-HHHHH-HHHHHhCCcEEEEEcCCCCCCCCCCCCCCCC-----------cCcHHHHHHHHHH
Q 000272 215 LDTTLLLVPGTAEGSIEK-RIRLF-VCEALRRGFFPVVMNPRGCGGSPLTTSRLFT-----------AADSDDICTAIQF 281 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~s-YIr~L-a~~La~~GYrVVVfD~RGhGgSpltsprly~-----------ag~tdDL~aaId~ 281 (1744)
.+|.+|.++|. |. +.. +-+.+ +..|++.|+..+++..+=||.=......-.. .+...+.+.++.|
T Consensus 91 ~rp~~IhLagT-GD-h~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~W 168 (348)
T PF09752_consen 91 YRPVCIHLAGT-GD-HGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHW 168 (348)
T ss_pred CCceEEEecCC-Cc-cchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHH
Confidence 36888999994 43 332 23445 7889999999999999988753221111111 1234677888999
Q ss_pred HHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecC
Q 000272 282 IGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDN 324 (1744)
Q Consensus 282 LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISp 324 (1744)
+..+ +..++.+.|.||||.++...++..+. ++..+-|+++
T Consensus 169 l~~~-G~~~~g~~G~SmGG~~A~laa~~~p~--pv~~vp~ls~ 208 (348)
T PF09752_consen 169 LERE-GYGPLGLTGISMGGHMAALAASNWPR--PVALVPCLSW 208 (348)
T ss_pred HHhc-CCCceEEEEechhHhhHHhhhhcCCC--ceeEEEeecc
Confidence 9887 77899999999999999988887765 5655556544
No 119
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.23 E-value=5.2e-05 Score=89.50 Aligned_cols=95 Identities=17% Similarity=0.174 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCc--HHHHHHHHHHHHhhC------CCCcEEEEEecHHHHHH
Q 000272 232 KRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAAD--SDDICTAIQFIGKAR------PWTTLMSVGWGYGANML 303 (1744)
Q Consensus 232 sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~--tdDL~aaId~Lrkry------P~spIvLVGhSMGG~Ia 303 (1744)
.+-..++..++++||.|++.||.|.|. .|..+. ..++...|+..++.. +..+++++|||-||.-+
T Consensus 13 ~~e~~~l~~~L~~GyaVv~pDY~Glg~-------~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa 85 (290)
T PF03583_consen 13 EYEAPFLAAWLARGYAVVAPDYEGLGT-------PYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAA 85 (290)
T ss_pred HhHHHHHHHHHHCCCEEEecCCCCCCC-------cccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHH
Confidence 355567788899999999999999986 222221 123333333333221 24689999999999776
Q ss_pred HHHHHH---hCCCCC--ceEEEEecCCCChhhhhc
Q 000272 304 TKYLAE---VGERTP--LTAVTCIDNPFDLEEATR 333 (1744)
Q Consensus 304 L~YLae---~ge~s~--L~AaVlISpP~Dl~es~~ 333 (1744)
+..+.. +..+.. +.++++.++|.|+.....
T Consensus 86 ~~AA~l~~~YApeL~~~l~Gaa~gg~~~dl~~~~~ 120 (290)
T PF03583_consen 86 LWAAELAPSYAPELNRDLVGAAAGGPPADLAALLR 120 (290)
T ss_pred HHHHHHhHHhCcccccceeEEeccCCccCHHHHHh
Confidence 544322 233345 889999999999876544
No 120
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.19 E-value=4e-05 Score=89.36 Aligned_cols=110 Identities=20% Similarity=0.301 Sum_probs=78.8
Q ss_pred CcEEEEEcCCCCCchhHHHHHHHHHHHh---CCcEEEEEcCCCCCCCCCC-----CCCCCCcCcHHHHHHHHHHHHhh--
Q 000272 216 DTTLLLVPGTAEGSIEKRIRLFVCEALR---RGFFPVVMNPRGCGGSPLT-----TSRLFTAADSDDICTAIQFIGKA-- 285 (1744)
Q Consensus 216 ~P~VVLLHGltGGS~~sYIr~La~~La~---~GYrVVVfD~RGhGgSplt-----sprly~ag~tdDL~aaId~Lrkr-- 285 (1744)
++.++++||-+| -. .|...+...+.+ ..|.|++..+.||..++.. ..+.|+ ..+.+...++++++.
T Consensus 2 ~~li~~IPGNPG-lv-~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~s--L~~QI~hk~~~i~~~~~ 77 (266)
T PF10230_consen 2 RPLIVFIPGNPG-LV-EFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFS--LQDQIEHKIDFIKELIP 77 (266)
T ss_pred cEEEEEECCCCC-hH-HHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccC--HHHHHHHHHHHHHHHhh
Confidence 467999999754 44 455567766664 4799999999999877544 223332 334555555555433
Q ss_pred -C--CCCcEEEEEecHHHHHHHHHHHHhC-CCCCceEEEEecCCCChh
Q 000272 286 -R--PWTTLMSVGWGYGANMLTKYLAEVG-ERTPLTAVTCIDNPFDLE 329 (1744)
Q Consensus 286 -y--P~spIvLVGhSMGG~IaL~YLae~g-e~s~L~AaVlISpP~Dl~ 329 (1744)
+ +..+++++|||+|+.|++..+-+.+ ...+|..++++.|...-.
T Consensus 78 ~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~i 125 (266)
T PF10230_consen 78 QKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDI 125 (266)
T ss_pred hhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccc
Confidence 2 5678999999999999999999987 345789999998876443
No 121
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.18 E-value=2.1e-05 Score=89.80 Aligned_cols=203 Identities=14% Similarity=0.077 Sum_probs=104.8
Q ss_pred CCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHh----hCCCC
Q 000272 214 GLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGK----ARPWT 289 (1744)
Q Consensus 214 g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~Lrk----ryP~s 289 (1744)
+.++.++++|- .||+...| +.+...+-. -+.++++.++|+|.--.. + ...|+..+.+.|.. -++..
T Consensus 5 ~~~~~L~cfP~-AGGsa~~f-r~W~~~lp~-~iel~avqlPGR~~r~~e-p------~~~di~~Lad~la~el~~~~~d~ 74 (244)
T COG3208 5 GARLRLFCFPH-AGGSASLF-RSWSRRLPA-DIELLAVQLPGRGDRFGE-P------LLTDIESLADELANELLPPLLDA 74 (244)
T ss_pred CCCceEEEecC-CCCCHHHH-HHHHhhCCc-hhheeeecCCCcccccCC-c------ccccHHHHHHHHHHHhccccCCC
Confidence 34567888885 56666554 455554433 489999999999853211 1 12344444444432 34577
Q ss_pred cEEEEEecHHHHHHHHHHHHhCCC-CCceEEEEec-CCCChhhhhccCchhHHhHHHHHHHHHHHHHhhhhhhhccCCCc
Q 000272 290 TLMSVGWGYGANMLTKYLAEVGER-TPLTAVTCID-NPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRAKGF 367 (1744)
Q Consensus 290 pIvLVGhSMGG~IaL~YLae~ge~-s~L~AaVlIS-pP~Dl~es~~slp~~~ly~~~L~~~Lk~~L~r~~~lf~~~~~~~ 367 (1744)
|+.++||||||+++...|.+.... .+..+..+.+ .+.... ..+. ....-+..|...++.+-.....
T Consensus 75 P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~-~~~~--i~~~~D~~~l~~l~~lgG~p~e--------- 142 (244)
T COG3208 75 PFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYD-RGKQ--IHHLDDADFLADLVDLGGTPPE--------- 142 (244)
T ss_pred CeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCc-ccCC--ccCCCHHHHHHHHHHhCCCChH---------
Confidence 999999999999999988775332 2333443332 221111 1111 0011122233333322111111
Q ss_pred CHHHHhhhhcHHHHH-HHHhhhccchhhHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChH-HHHHhcCCCeEEE
Q 000272 368 DVEKALSAKSVRDFE-KAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIP-RSSIAENPFTSLL 444 (1744)
Q Consensus 368 Did~vlkarTirEFD-d~~tap~~Gf~sv~eYY~~aS~~~~L~~IkVPVLIIhG-DDp~VP~~aip-~~la~~nPnv~Lv 444 (1744)
++....++++- ..+.+ -|.-++.| +- ..-..+.||+.++.| +|..+..+.+. +... ......+.
T Consensus 143 ----~led~El~~l~LPilRA---D~~~~e~Y-~~----~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~-t~~~f~l~ 209 (244)
T COG3208 143 ----LLEDPELMALFLPILRA---DFRALESY-RY----PPPAPLACPIHAFGGEKDHEVSRDELGAWREH-TKGDFTLR 209 (244)
T ss_pred ----HhcCHHHHHHHHHHHHH---HHHHhccc-cc----CCCCCcCcceEEeccCcchhccHHHHHHHHHh-hcCCceEE
Confidence 11111222211 11111 12212222 11 112578999999999 89988765543 4432 33467899
Q ss_pred EecCCCc
Q 000272 445 LCSCLPS 451 (1744)
Q Consensus 445 Lt~gGHH 451 (1744)
+++|||.
T Consensus 210 ~fdGgHF 216 (244)
T COG3208 210 VFDGGHF 216 (244)
T ss_pred EecCcce
Confidence 9998883
No 122
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.12 E-value=1.9e-05 Score=90.03 Aligned_cols=111 Identities=17% Similarity=0.237 Sum_probs=74.5
Q ss_pred CCcEEEEEcCCCCCchhHHHHHHHHHHHh--------CCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhC
Q 000272 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALR--------RGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKAR 286 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sYIr~La~~La~--------~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~Lrkry 286 (1744)
.+.+|||+||.. |+... +|.++..+.+ ..++++.+|+...... .. .... ....+-+.++++++.+.|
T Consensus 3 ~g~pVlFIhG~~-Gs~~q-~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~-~~-g~~l-~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 3 SGIPVLFIHGNA-GSYKQ-VRSLASELQRKALLNDNSSHFDFFTVDFNEELSA-FH-GRTL-QRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCCEEEEECcCC-CCHhH-HHHHHHHHhhhhhhccCccceeEEEeccCccccc-cc-cccH-HHHHHHHHHHHHHHHHhh
Confidence 357899999974 45443 4566655522 2588999998765321 11 1111 123466777888887777
Q ss_pred -----CCCcEEEEEecHHHHHHHHHHHHhCC-CCCceEEEEecCCCChhh
Q 000272 287 -----PWTTLMSVGWGYGANMLTKYLAEVGE-RTPLTAVTCIDNPFDLEE 330 (1744)
Q Consensus 287 -----P~spIvLVGhSMGG~IaL~YLae~ge-~s~L~AaVlISpP~Dl~e 330 (1744)
+..++++|||||||.++-.++..... ...+..+++++.|.....
T Consensus 78 ~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 78 KSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGSP 127 (225)
T ss_pred hhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCcc
Confidence 67899999999999887777655432 235999999999886543
No 123
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.05 E-value=1.8e-05 Score=98.21 Aligned_cols=98 Identities=11% Similarity=0.106 Sum_probs=78.6
Q ss_pred hhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHH
Q 000272 230 IEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAE 309 (1744)
Q Consensus 230 ~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae 309 (1744)
...|+..+++.|.+.||.+ ..|++|+|.+...... .....+++.+.|+.+.++++..+++++||||||.++..|+..
T Consensus 106 ~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~--~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 106 EVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNR--LPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred hHHHHHHHHHHHHHcCCcc-CCCcccCCCCcccccc--HHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHH
Confidence 3467889999999999876 7899999987433211 122468999999999888888899999999999999999988
Q ss_pred hCCC--CCceEEEEecCCCChhh
Q 000272 310 VGER--TPLTAVTCIDNPFDLEE 330 (1744)
Q Consensus 310 ~ge~--s~L~AaVlISpP~Dl~e 330 (1744)
+++. ..++..|++++||+...
T Consensus 183 ~p~~~~k~I~~~I~la~P~~Gs~ 205 (440)
T PLN02733 183 HSDVFEKYVNSWIAIAAPFQGAP 205 (440)
T ss_pred CCHhHHhHhccEEEECCCCCCCc
Confidence 7653 34899999999998653
No 124
>COG0400 Predicted esterase [General function prediction only]
Probab=98.03 E-value=6.9e-05 Score=84.66 Aligned_cols=103 Identities=14% Similarity=0.220 Sum_probs=61.3
Q ss_pred CCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCC--------CcC----cHHHHHHHHHH
Q 000272 214 GLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLF--------TAA----DSDDICTAIQF 281 (1744)
Q Consensus 214 g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly--------~ag----~tdDL~aaId~ 281 (1744)
...|+||++||+ |++...++- +......+ + ..+..||-=... ...++| ... .+..+.+.|..
T Consensus 16 p~~~~iilLHG~-Ggde~~~~~-~~~~~~P~-~--~~is~rG~v~~~-g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~ 89 (207)
T COG0400 16 PAAPLLILLHGL-GGDELDLVP-LPELILPN-A--TLVSPRGPVAEN-GGPRFFRRYDEGSFDQEDLDLETEKLAEFLEE 89 (207)
T ss_pred CCCcEEEEEecC-CCChhhhhh-hhhhcCCC-C--eEEcCCCCcccc-CcccceeecCCCccchhhHHHHHHHHHHHHHH
Confidence 346789999997 666665543 33333322 3 334455532211 111221 111 12445556666
Q ss_pred HHhhCC--CCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecC
Q 000272 282 IGKARP--WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDN 324 (1744)
Q Consensus 282 LrkryP--~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISp 324 (1744)
+..+++ ..+++++|||=||++++..+..++. .+.+++++++
T Consensus 90 ~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~--~~~~ail~~g 132 (207)
T COG0400 90 LAEEYGIDSSRIILIGFSQGANIALSLGLTLPG--LFAGAILFSG 132 (207)
T ss_pred HHHHhCCChhheEEEecChHHHHHHHHHHhCch--hhccchhcCC
Confidence 666665 3799999999999999999888765 5777766644
No 125
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=97.98 E-value=2.1e-05 Score=94.23 Aligned_cols=95 Identities=15% Similarity=0.203 Sum_probs=69.3
Q ss_pred CCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCC--CCCCCCCCCC--CC----cCcHHHHHHHHHHHHhh-
Q 000272 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGC--GGSPLTTSRL--FT----AADSDDICTAIQFIGKA- 285 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGh--GgSpltsprl--y~----ag~tdDL~aaId~Lrkr- 285 (1744)
.-|+|++-||. |++.+. +-.+++.+++.||.|.+++++|. |+.+...... |. .....|+..+|+++.++
T Consensus 70 ~~PlvvlshG~-Gs~~~~-f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~ 147 (365)
T COG4188 70 LLPLVVLSHGS-GSYVTG-FAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLT 147 (365)
T ss_pred cCCeEEecCCC-CCCccc-hhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhh
Confidence 46889999996 555444 44678999999999999999994 4443221110 11 24468999999998776
Q ss_pred -CC-------CCcEEEEEecHHHHHHHHHHHHhC
Q 000272 286 -RP-------WTTLMSVGWGYGANMLTKYLAEVG 311 (1744)
Q Consensus 286 -yP-------~spIvLVGhSMGG~IaL~YLae~g 311 (1744)
-| ..++.++|||+||..++..++.+.
T Consensus 148 ~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~ 181 (365)
T COG4188 148 ASPALAGRLDPQRVGVLGHSFGGYTAMELAGAEL 181 (365)
T ss_pred cCcccccccCccceEEEecccccHHHHHhccccc
Confidence 12 358999999999999988876643
No 126
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=97.93 E-value=0.00035 Score=84.24 Aligned_cols=129 Identities=13% Similarity=0.045 Sum_probs=83.8
Q ss_pred CCCcEEEEEecCCCccccccCCCcEEEEEcCCCCC--ch-hHHHHHHHHH-HHhCCcEEEEEcCCCCCCCCCCCCCCCCc
Q 000272 194 EDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEG--SI-EKRIRLFVCE-ALRRGFFPVVMNPRGCGGSPLTTSRLFTA 269 (1744)
Q Consensus 194 ~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGG--S~-~sYIr~La~~-La~~GYrVVVfD~RGhGgSpltsprly~a 269 (1744)
.....+.+..|.|.... .....|.||++||++.. |. ....-.++.. +.+.+..||.+|||= . |.....
T Consensus 69 ~~~~~l~vRly~P~~~~-~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRL---A----PEh~~P 140 (336)
T KOG1515|consen 69 DPFTNLPVRLYRPTSSS-SETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRL---A----PEHPFP 140 (336)
T ss_pred cCCCCeEEEEEcCCCCC-cccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCccc---C----CCCCCC
Confidence 34444555556554322 11467999999996321 11 1122233333 466799999999992 2 222223
Q ss_pred CcHHHHHHHHHHHHhh------CCCCcEEEEEecHHHHHHHHHHHHhCC----CCCceEEEEecCCCChhh
Q 000272 270 ADSDDICTAIQFIGKA------RPWTTLMSVGWGYGANMLTKYLAEVGE----RTPLTAVTCIDNPFDLEE 330 (1744)
Q Consensus 270 g~tdDL~aaId~Lrkr------yP~spIvLVGhSMGG~IaL~YLae~ge----~s~L~AaVlISpP~Dl~e 330 (1744)
...+|...++.|+.++ ...++++++|-|.||||+...+.+..+ ...+++.+++-|.+...+
T Consensus 141 a~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 141 AAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTD 211 (336)
T ss_pred ccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCC
Confidence 3458888888888764 234689999999999999888766442 356999999988877654
No 127
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=97.89 E-value=0.0022 Score=75.12 Aligned_cols=132 Identities=15% Similarity=0.179 Sum_probs=90.0
Q ss_pred eEEEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHH-----HHHHHhCCcEEEEEcCCCCCCCC
Q 000272 186 YQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLF-----VCEALRRGFFPVVMNPRGCGGSP 260 (1744)
Q Consensus 186 YeRe~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~L-----a~~La~~GYrVVVfD~RGhGgSp 260 (1744)
.+.+.+.++-| .+.+-.+..+ .+.+|++|-.|.+ |-++.+....+ +..+..+ |.++-+|.+||-.-.
T Consensus 22 ~~e~~V~T~~G-~v~V~V~Gd~-----~~~kpaiiTyhDl-glN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gA 93 (326)
T KOG2931|consen 22 CQEHDVETAHG-VVHVTVYGDP-----KGNKPAIITYHDL-GLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGA 93 (326)
T ss_pred ceeeeeccccc-cEEEEEecCC-----CCCCceEEEeccc-ccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCC
Confidence 46667888775 4444444332 1256888889997 45555422222 2344555 999999999995332
Q ss_pred CCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCC
Q 000272 261 LTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFD 327 (1744)
Q Consensus 261 ltsprly~ag~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~D 327 (1744)
..-|..|.+-..+|+.+.|-.+.+++.-..++.+|...|++|+++||..+++ +|.|+|+|.+...
T Consensus 94 p~~p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~--rV~GLvLIn~~~~ 158 (326)
T KOG2931|consen 94 PSFPEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPE--RVLGLVLINCDPC 158 (326)
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChh--heeEEEEEecCCC
Confidence 2334455555566777666666666666789999999999999999999887 6899999965443
No 128
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=97.82 E-value=0.00015 Score=82.67 Aligned_cols=107 Identities=15% Similarity=0.131 Sum_probs=71.9
Q ss_pred CCcEEEEEcCCCCCchhHHHH--HHHHHHHhCCcEEEEEcCCCCC---CCCC--CCCCCCCcCcHHHHHHHHHHHHhhCC
Q 000272 215 LDTTLLLVPGTAEGSIEKRIR--LFVCEALRRGFFPVVMNPRGCG---GSPL--TTSRLFTAADSDDICTAIQFIGKARP 287 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sYIr--~La~~La~~GYrVVVfD~RGhG---gSpl--tsprly~ag~tdDL~aaId~LrkryP 287 (1744)
..|.||++||. +++...+.. .+...+.+.||.|+.++..... ++-. ........++...+..+|+++..+|+
T Consensus 15 ~~PLVv~LHG~-~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~ 93 (220)
T PF10503_consen 15 PVPLVVVLHGC-GQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYN 93 (220)
T ss_pred CCCEEEEeCCC-CCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcc
Confidence 46899999995 556555432 3445566789999988853211 1100 00011112345678899999998886
Q ss_pred --CCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecC
Q 000272 288 --WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDN 324 (1744)
Q Consensus 288 --~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISp 324 (1744)
..|+++.|+|.||+++..+++.+|+ .+.++.+++.
T Consensus 94 iD~~RVyv~G~S~Gg~ma~~la~~~pd--~faa~a~~sG 130 (220)
T PF10503_consen 94 IDPSRVYVTGLSNGGMMANVLACAYPD--LFAAVAVVSG 130 (220)
T ss_pred cCCCceeeEEECHHHHHHHHHHHhCCc--cceEEEeecc
Confidence 4599999999999999999999987 4666555543
No 129
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=97.78 E-value=0.00076 Score=79.25 Aligned_cols=131 Identities=13% Similarity=0.162 Sum_probs=73.9
Q ss_pred EEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHH----HHHHHhCCcEEEEEcCCCCCCCCCCCC
Q 000272 189 VCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLF----VCEALRRGFFPVVMNPRGCGGSPLTTS 264 (1744)
Q Consensus 189 e~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~L----a~~La~~GYrVVVfD~RGhGgSpltsp 264 (1744)
+.++++-| .+.+--...+ .+.+|++|-.|-+ |-++.+.+..| .-......|-++=+|.|||..-...-|
T Consensus 2 h~v~t~~G-~v~V~v~G~~-----~~~kp~ilT~HDv-GlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p 74 (283)
T PF03096_consen 2 HDVETPYG-SVHVTVQGDP-----KGNKPAILTYHDV-GLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLP 74 (283)
T ss_dssp EEEEETTE-EEEEEEESS-------TTS-EEEEE--T-T--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----
T ss_pred ceeccCce-EEEEEEEecC-----CCCCceEEEeccc-cccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCccccc
Confidence 34566666 3443323221 2258999999986 45555521122 112234669999999999975444445
Q ss_pred CCCCcCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCCh
Q 000272 265 RLFTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDL 328 (1744)
Q Consensus 265 rly~ag~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl 328 (1744)
..|.+-..+++.+.|..+.++++-..++.+|...||+|+++||..+++ ++.|+|++++....
T Consensus 75 ~~y~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~--~V~GLiLvn~~~~~ 136 (283)
T PF03096_consen 75 EGYQYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPE--RVLGLILVNPTCTA 136 (283)
T ss_dssp TT-----HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGG--GEEEEEEES---S-
T ss_pred ccccccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCcc--ceeEEEEEecCCCC
Confidence 556666667777666666666666789999999999999999999886 69999999765544
No 130
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.75 E-value=0.00017 Score=83.85 Aligned_cols=106 Identities=15% Similarity=0.220 Sum_probs=79.3
Q ss_pred ccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhC----C
Q 000272 212 EHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKAR----P 287 (1744)
Q Consensus 212 ~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~Lrkry----P 287 (1744)
..+.-|+||++||+. ....+...+..+++..||-||.+|....+.- -.....+++.++++|+.+.. |
T Consensus 13 ~~g~yPVv~f~~G~~--~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~-------~~~~~~~~~~~vi~Wl~~~L~~~l~ 83 (259)
T PF12740_consen 13 SAGTYPVVLFLHGFL--LINSWYSQLLEHVASHGYIVVAPDLYSIGGP-------DDTDEVASAAEVIDWLAKGLESKLP 83 (259)
T ss_pred CCCCcCEEEEeCCcC--CCHHHHHHHHHHHHhCceEEEEecccccCCC-------CcchhHHHHHHHHHHHHhcchhhcc
Confidence 346689999999984 4444567889999999999999997665431 12235678889999976532 1
Q ss_pred ------CCcEEEEEecHHHHHHHHHHHHhCC---CCCceEEEEecCCC
Q 000272 288 ------WTTLMSVGWGYGANMLTKYLAEVGE---RTPLTAVTCIDNPF 326 (1744)
Q Consensus 288 ------~spIvLVGhSMGG~IaL~YLae~ge---~s~L~AaVlISpP~ 326 (1744)
..++.+.|||-||-++...+....+ ...+++++++.|.-
T Consensus 84 ~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 84 LGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred ccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 3489999999999999988877633 34688999887654
No 131
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.68 E-value=2.2e-05 Score=89.36 Aligned_cols=90 Identities=16% Similarity=0.199 Sum_probs=54.7
Q ss_pred cEEEEEcCCCCCchhHHHHHHHHHHHhCCcE---EEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEE
Q 000272 217 TTLLLVPGTAEGSIEKRIRLFVCEALRRGFF---PVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMS 293 (1744)
Q Consensus 217 P~VVLLHGltGGS~~sYIr~La~~La~~GYr---VVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIvL 293 (1744)
-||||+||.. ++...-|..++++|.++||. +++++|-.....+..............++++|+.+++.-+. ++-+
T Consensus 2 ~PVVlVHG~~-~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDI 79 (219)
T PF01674_consen 2 RPVVLVHGTG-GNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDI 79 (219)
T ss_dssp --EEEE--TT-TTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEE
T ss_pred CCEEEECCCC-cchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEE
Confidence 4699999974 43444466889999999999 79999944433111100001123347899999999887777 9999
Q ss_pred EEecHHHHHHHHHHH
Q 000272 294 VGWGYGANMLTKYLA 308 (1744)
Q Consensus 294 VGhSMGG~IaL~YLa 308 (1744)
|||||||.++-.|+-
T Consensus 80 VgHS~G~~iaR~yi~ 94 (219)
T PF01674_consen 80 VGHSMGGTIARYYIK 94 (219)
T ss_dssp EEETCHHHHHHHHHH
T ss_pred EEcCCcCHHHHHHHH
Confidence 999999988777764
No 132
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.64 E-value=0.00028 Score=80.99 Aligned_cols=113 Identities=15% Similarity=0.128 Sum_probs=76.8
Q ss_pred CCcEEEEEcCCCCCchhHHHHHHHHHHHhCCc--EEEEEcCCCCCCCCCC-CCCCCCcCcHHHHHHHHHHHHhhCCCCcE
Q 000272 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGF--FPVVMNPRGCGGSPLT-TSRLFTAADSDDICTAIQFIGKARPWTTL 291 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sYIr~La~~La~~GY--rVVVfD~RGhGgSplt-sprly~ag~tdDL~aaId~LrkryP~spI 291 (1744)
.+.++|++||+. .+.+.-++.+++.....|| .+++|.||+.|..... ..+........++..+|..+....+..+|
T Consensus 17 ~~~vlvfVHGyn-~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 17 DKEVLVFVHGYN-NSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCeEEEEEeCCC-CCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 467899999984 4444446667766666666 6999999988752110 01110011236888888888877677899
Q ss_pred EEEEecHHHHHHHHHHHHhCCC-------CCceEEEEecCCCCh
Q 000272 292 MSVGWGYGANMLTKYLAEVGER-------TPLTAVTCIDNPFDL 328 (1744)
Q Consensus 292 vLVGhSMGG~IaL~YLae~ge~-------s~L~AaVlISpP~Dl 328 (1744)
.+++||||+.+++..+...... ..+..+++++|-.+.
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 9999999999999887663322 246677777666555
No 133
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=97.59 E-value=0.0011 Score=84.13 Aligned_cols=228 Identities=14% Similarity=0.128 Sum_probs=137.3
Q ss_pred EEEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC---C
Q 000272 187 QRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLT---T 263 (1744)
Q Consensus 187 eRe~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSplt---s 263 (1744)
+|...+..||..|-+-.....+ ....+..|.+|.--|-.|.++..++....--|+.+||--.+..-||=|.-... .
T Consensus 420 ~riwa~a~dgv~VPVSLvyrkd-~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~ 498 (682)
T COG1770 420 RRIWATADDGVQVPVSLVYRKD-TKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYED 498 (682)
T ss_pred EEEEEEcCCCcEeeEEEEEecc-cCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHh
Confidence 4455666788766544322211 12345678999999988888877665555578899999999999998754211 1
Q ss_pred CCCCC-cCcHHHHHHHHHHHHhh-CC-CCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHH
Q 000272 264 SRLFT-AADSDDICTAIQFIGKA-RP-WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIA 340 (1744)
Q Consensus 264 prly~-ag~tdDL~aaId~Lrkr-yP-~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~l 340 (1744)
.+..+ .....|+.++.+||.+. +. ..+|+++|-|.||+++...+-+.|+ .+.++|+-.|-.|...++..-
T Consensus 499 GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~--lf~~iiA~VPFVDvltTMlD~----- 571 (682)
T COG1770 499 GKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPD--LFAGIIAQVPFVDVLTTMLDP----- 571 (682)
T ss_pred hhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChh--hhhheeecCCccchhhhhcCC-----
Confidence 11111 12358999999998754 33 3489999999999999999988776 577777766666766543210
Q ss_pred hHHHHHHHHHHHHHhhhhhhhccCCCcCHHHHhhhhcHHHHHHHHhhhccchhhHHHHHhhcCcchhcCcCC-ccEEEEE
Q 000272 341 LDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIK-IPVLFIQ 419 (1744)
Q Consensus 341 y~~~L~~~Lk~~L~r~~~lf~~~~~~~Did~vlkarTirEFDd~~tap~~Gf~sv~eYY~~aS~~~~L~~Ik-VPVLIIh 419 (1744)
.. .-+..||++.= .|. -+..-+|....||.+.+..=. -|+|++.
T Consensus 572 ---------------sl-----------------PLT~~E~~EWG-NP~--d~e~y~yikSYSPYdNV~a~~YP~ilv~~ 616 (682)
T COG1770 572 ---------------SL-----------------PLTVTEWDEWG-NPL--DPEYYDYIKSYSPYDNVEAQPYPAILVTT 616 (682)
T ss_pred ---------------CC-----------------CCCccchhhhC-CcC--CHHHHHHHhhcCchhccccCCCCceEEEc
Confidence 00 11222333210 000 112234455556665554433 4667777
Q ss_pred e-CCCCCCCCChHH-----HHHhcCCCeEEEEec-CCCccccCCC
Q 000272 420 N-DAGAVPPFSIPR-----SSIAENPFTSLLLCS-CLPSSVIGGG 457 (1744)
Q Consensus 420 G-DDp~VP~~aip~-----~la~~nPnv~LvLt~-gGHH~gF~e~ 457 (1744)
| .|+-|..---.. ..++.-.+-.|.-+. .+||+++.++
T Consensus 617 Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHgG~SgR 661 (682)
T COG1770 617 GLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGGASGR 661 (682)
T ss_pred cccCCccccchHHHHHHHHhhcccCCCcEEEEecccccCCCCCCc
Confidence 7 999987422111 112222333444454 6889888874
No 134
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=97.55 E-value=0.00018 Score=81.32 Aligned_cols=55 Identities=15% Similarity=0.137 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHhhCC--CCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhh
Q 000272 273 DDICTAIQFIGKARP--WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEE 330 (1744)
Q Consensus 273 dDL~aaId~LrkryP--~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~e 330 (1744)
+-+..+++|++++-. ..+|.++|.|.||-+++..++.++ .+.++|+++++.-...
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~---~i~avVa~~ps~~~~~ 60 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP---QISAVVAISPSSVVFQ 60 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS---SEEEEEEES--SB--S
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC---CccEEEEeCCceeEec
Confidence 447889999987632 258999999999999999999987 4999999877655443
No 135
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=97.53 E-value=0.0005 Score=77.50 Aligned_cols=109 Identities=13% Similarity=0.107 Sum_probs=48.5
Q ss_pred CcEEEEEcCCCCCchhHH---HHHHHHHHHhCCcEEEEEcCCCCC-----CCCC---------CCCCCCCc---Cc----
Q 000272 216 DTTLLLVPGTAEGSIEKR---IRLFVCEALRRGFFPVVMNPRGCG-----GSPL---------TTSRLFTA---AD---- 271 (1744)
Q Consensus 216 ~P~VVLLHGltGGS~~sY---Ir~La~~La~~GYrVVVfD~RGhG-----gSpl---------tsprly~a---g~---- 271 (1744)
++-||+|||+ +.+.+.+ ...+...+.+.+|..+.+|-+=-- -.+. .....|.+ ..
T Consensus 4 k~riLcLHG~-~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 4 KPRILCLHGY-GQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp --EEEEE--T-T--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CceEEEeCCC-CcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 5789999997 4555544 334444454448999998875221 1110 01111111 11
Q ss_pred HHHHHHHHHHHHhhCC-CCc-EEEEEecHHHHHHHHHHHHhC------CCCCceEEEEecCC
Q 000272 272 SDDICTAIQFIGKARP-WTT-LMSVGWGYGANMLTKYLAEVG------ERTPLTAVTCIDNP 325 (1744)
Q Consensus 272 tdDL~aaId~LrkryP-~sp-IvLVGhSMGG~IaL~YLae~g------e~s~L~AaVlISpP 325 (1744)
..++...++++.+... ..| ..++|||.||.+++.++.... ...+++-+|++|+.
T Consensus 83 ~~~~~~sl~~l~~~i~~~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~ 144 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGF 144 (212)
T ss_dssp G---HHHHHHHHHHHHHH---SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES--
T ss_pred ccCHHHHHHHHHHHHHhcCCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEccc
Confidence 2345555555443211 123 479999999999998886532 12346777777654
No 136
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.49 E-value=0.00077 Score=79.03 Aligned_cols=126 Identities=15% Similarity=0.137 Sum_probs=85.9
Q ss_pred CCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHH--HHHHHHHHhCCcEEEEEc-------CCCCCCCCCCCCC
Q 000272 195 DGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRI--RLFVCEALRRGFFPVVMN-------PRGCGGSPLTTSR 265 (1744)
Q Consensus 195 DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYI--r~La~~La~~GYrVVVfD-------~RGhGgSpltspr 265 (1744)
+|..-.+..+.|+. .....|.||+|||. +++...+. -.+-..+.+.||-|+.+| --||+.+....++
T Consensus 43 ~g~~r~y~l~vP~g---~~~~apLvv~LHG~-~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~ 118 (312)
T COG3509 43 NGLKRSYRLYVPPG---LPSGAPLVVVLHGS-GGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADR 118 (312)
T ss_pred CCCccceEEEcCCC---CCCCCCEEEEEecC-CCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccc
Confidence 34444455555532 22345899999995 45555442 122334556899999883 2345555444444
Q ss_pred CCCcCcHHHHHHHHHHHHhhCCCC--cEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCC
Q 000272 266 LFTAADSDDICTAIQFIGKARPWT--TLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPF 326 (1744)
Q Consensus 266 ly~ag~tdDL~aaId~LrkryP~s--pIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~ 326 (1744)
.-...+..++++++..+..+|... ++++.|.|-||.++..+++++++ .+.++..++...
T Consensus 119 ~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~--~faa~A~VAg~~ 179 (312)
T COG3509 119 RRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPD--IFAAIAPVAGLL 179 (312)
T ss_pred cCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcc--cccceeeeeccc
Confidence 455667889999999999998754 99999999999999999999876 466666665554
No 137
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.47 E-value=0.00035 Score=80.49 Aligned_cols=106 Identities=15% Similarity=0.153 Sum_probs=79.7
Q ss_pred ccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhC----C
Q 000272 212 EHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKAR----P 287 (1744)
Q Consensus 212 ~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~Lrkry----P 287 (1744)
+.+.-|.|+++||+. -...|+..+..+.+.+||-|++++.-... + .......++...+++|+.+.. |
T Consensus 42 ~~G~yPVilF~HG~~--l~ns~Ys~lL~HIASHGfIVVAPQl~~~~--~-----p~~~~Ei~~aa~V~~WL~~gL~~~Lp 112 (307)
T PF07224_consen 42 EAGTYPVILFLHGFN--LYNSFYSQLLAHIASHGFIVVAPQLYTLF--P-----PDGQDEIKSAASVINWLPEGLQHVLP 112 (307)
T ss_pred cCCCccEEEEeechh--hhhHHHHHHHHHHhhcCeEEEechhhccc--C-----CCchHHHHHHHHHHHHHHhhhhhhCC
Confidence 456789999999984 34556667888999999999999985431 1 123345688999999997652 1
Q ss_pred ------CCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCC
Q 000272 288 ------WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPF 326 (1744)
Q Consensus 288 ------~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~ 326 (1744)
-.++.++|||.||-.+...+..+.....+.++|.+.|.-
T Consensus 113 ~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 113 ENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred CCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccC
Confidence 248999999999999999888776555687877775543
No 138
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=97.46 E-value=0.00071 Score=79.73 Aligned_cols=131 Identities=17% Similarity=0.162 Sum_probs=84.0
Q ss_pred eEEEEEEcCCCcEEEEEecCCCccccccCC-CcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC
Q 000272 186 YQRVCVNTEDGGVISLDWPSNLDLHEEHGL-DTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTS 264 (1744)
Q Consensus 186 YeRe~L~t~DGG~IaLDW~~p~~~~~~~g~-~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsp 264 (1744)
-+|-.+...||..|.--+.+..+ +..++ ...||++-|-.| .|--..+..-++.||.|+.+|++|+++|....
T Consensus 214 G~R~kiks~dgneiDtmF~d~r~--n~~~ngq~LvIC~EGNAG----FYEvG~m~tP~~lgYsvLGwNhPGFagSTG~P- 286 (517)
T KOG1553|consen 214 GQRLKIKSSDGNEIDTMFLDGRP--NQSGNGQDLVICFEGNAG----FYEVGVMNTPAQLGYSVLGWNHPGFAGSTGLP- 286 (517)
T ss_pred CeEEEEeecCCcchhheeecCCC--CCCCCCceEEEEecCCcc----ceEeeeecChHHhCceeeccCCCCccccCCCC-
Confidence 46777888888877544444321 11222 345666677432 23112233446689999999999999986432
Q ss_pred CCCCcCcHHHHHHHHHHHHhh--CCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCCh
Q 000272 265 RLFTAADSDDICTAIQFIGKA--RPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDL 328 (1744)
Q Consensus 265 rly~ag~tdDL~aaId~Lrkr--yP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl 328 (1744)
|......-+.+++++.-+. ++...|++.|||.||.-++..|..+|+ ++|+|+-+.--|+
T Consensus 287 --~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd---VkavvLDAtFDDl 347 (517)
T KOG1553|consen 287 --YPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD---VKAVVLDATFDDL 347 (517)
T ss_pred --CcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC---ceEEEeecchhhh
Confidence 3333345566777776443 567789999999999988888887875 7777665443344
No 139
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=97.45 E-value=0.00026 Score=86.70 Aligned_cols=107 Identities=13% Similarity=0.166 Sum_probs=62.1
Q ss_pred CCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCC-C-C-CCCC----------C-------CC---c-
Q 000272 214 GLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGS-P-L-TTSR----------L-------FT---A- 269 (1744)
Q Consensus 214 g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgS-p-l-tspr----------l-------y~---a- 269 (1744)
+.-|+||+-||+ +|+...|- .++..|+.+||-|++++||....+ . . ..+. . +. .
T Consensus 98 ~~~PvvIFSHGl-gg~R~~yS-~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T PF03403_consen 98 GKFPVVIFSHGL-GGSRTSYS-AICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPE 175 (379)
T ss_dssp S-EEEEEEE--T-T--TTTTH-HHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GG
T ss_pred CCCCEEEEeCCC-CcchhhHH-HHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccch
Confidence 346899999998 56777664 778899999999999999965322 0 0 0000 0 00 0
Q ss_pred -----------CcHHHHHHHHHHHHhhC----------------------CCCcEEEEEecHHHHHHHHHHHHhCCCCCc
Q 000272 270 -----------ADSDDICTAIQFIGKAR----------------------PWTTLMSVGWGYGANMLTKYLAEVGERTPL 316 (1744)
Q Consensus 270 -----------g~tdDL~aaId~Lrkry----------------------P~spIvLVGhSMGG~IaL~YLae~ge~s~L 316 (1744)
...+|+..+++.|+.-. ...++.++|||+||..++..+... .++
T Consensus 176 ~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d---~r~ 252 (379)
T PF03403_consen 176 EEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD---TRF 252 (379)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH----TT-
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc---cCc
Confidence 02357778887775310 124789999999999999888774 468
Q ss_pred eEEEEecCC
Q 000272 317 TAVTCIDNP 325 (1744)
Q Consensus 317 ~AaVlISpP 325 (1744)
+++|++.+.
T Consensus 253 ~~~I~LD~W 261 (379)
T PF03403_consen 253 KAGILLDPW 261 (379)
T ss_dssp -EEEEES--
T ss_pred ceEEEeCCc
Confidence 888888554
No 140
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.42 E-value=0.0004 Score=86.47 Aligned_cols=191 Identities=16% Similarity=0.182 Sum_probs=110.2
Q ss_pred CcEEEEEcCCC-CCchhHHHHHHHHHHHhCC--cEEEEEcCC-CCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcE
Q 000272 216 DTTLLLVPGTA-EGSIEKRIRLFVCEALRRG--FFPVVMNPR-GCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTL 291 (1744)
Q Consensus 216 ~P~VVLLHGlt-GGS~~sYIr~La~~La~~G--YrVVVfD~R-GhGgSpltsprly~ag~tdDL~aaId~LrkryP~spI 291 (1744)
.|.++++||.. ......+++.+-+.+...| -.+..||++ ++|+-......-| ...-.+..+..++.+||..+|
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG~nI~h~ae~---~vSf~r~kvlei~gefpha~I 252 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGGANIKHAAEY---SVSFDRYKVLEITGEFPHAPI 252 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCCcchHHHHHH---HHHHhhhhhhhhhccCCCCce
Confidence 57889999875 2223334444444444445 346777876 3444211100000 011122223344556899999
Q ss_pred EEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhhccCchhHHhHHHHHHHHHHHHHhhhhhhhccCCCcCHHH
Q 000272 292 MSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEK 371 (1744)
Q Consensus 292 vLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~~slp~~~ly~~~L~~~Lk~~L~r~~~lf~~~~~~~Did~ 371 (1744)
+++|+|||+.+++.......+ ..|.++||++-|++.....+
T Consensus 253 iLvGrsmGAlVachVSpsnsd-v~V~~vVCigypl~~vdgpr-------------------------------------- 293 (784)
T KOG3253|consen 253 ILVGRSMGALVACHVSPSNSD-VEVDAVVCIGYPLDTVDGPR-------------------------------------- 293 (784)
T ss_pred EEEecccCceeeEEeccccCC-ceEEEEEEecccccCCCccc--------------------------------------
Confidence 999999998887776655433 34899999977766543321
Q ss_pred HhhhhcHHHHHHHHhhhccchhhHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCC
Q 000272 372 ALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLP 450 (1744)
Q Consensus 372 vlkarTirEFDd~~tap~~Gf~sv~eYY~~aS~~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la~~nPnv~LvLt~gGH 450 (1744)
|.+ .+.+-+++.|+|++.| .|..+++..+.....+--...+++++.+++
T Consensus 294 -------------------gir-----------DE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~ad 343 (784)
T KOG3253|consen 294 -------------------GIR-----------DEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGAD 343 (784)
T ss_pred -------------------CCc-----------chhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCC
Confidence 111 1234467899999999 999998765532111122346789999988
Q ss_pred ccccCCCC----chh--HHHHHHHHHHHHHHHhh
Q 000272 451 SSVIGGGR----AAE--SWCQNLVIEWLSAVELG 478 (1744)
Q Consensus 451 H~gF~e~~----~~~--sWv~r~VlEFL~av~~~ 478 (1744)
|..-.... ... .-++..+.+||.++-..
T Consensus 344 hsmaipk~k~esegltqseVd~~i~~aI~efvt~ 377 (784)
T KOG3253|consen 344 HSMAIPKRKVESEGLTQSEVDSAIAQAIKEFVTI 377 (784)
T ss_pred ccccCCccccccccccHHHHHHHHHHHHHHHHHH
Confidence 87655431 111 23556667777655433
No 141
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.40 E-value=0.00015 Score=87.26 Aligned_cols=106 Identities=13% Similarity=0.194 Sum_probs=64.1
Q ss_pred CCCcEEEEEcCCCCCc-hhHHHHHHHHHHHhC---CcEEEEEcCCCCCCCCCCCCCCCCc--CcH----HHHHHHHHHHH
Q 000272 214 GLDTTLLLVPGTAEGS-IEKRIRLFVCEALRR---GFFPVVMNPRGCGGSPLTTSRLFTA--ADS----DDICTAIQFIG 283 (1744)
Q Consensus 214 g~~P~VVLLHGltGGS-~~sYIr~La~~La~~---GYrVVVfD~RGhGgSpltsprly~a--g~t----dDL~aaId~Lr 283 (1744)
...|++|++|||.+.. ...++..+...+.++ ++.|+++||...... .|.. ..+ ..+..+|..|.
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~------~Y~~a~~n~~~vg~~la~~l~~L~ 142 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN------NYPQAVANTRLVGRQLAKFLSFLI 142 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc------cccchhhhHHHHHHHHHHHHHHHH
Confidence 4689999999998766 456788888766664 899999999644321 2221 122 34555566665
Q ss_pred hh--CCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCC
Q 000272 284 KA--RPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNP 325 (1744)
Q Consensus 284 kr--yP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP 325 (1744)
.. .+...+++|||||||.++............|..+..+.|.
T Consensus 143 ~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPA 186 (331)
T PF00151_consen 143 NNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPA 186 (331)
T ss_dssp HHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B
T ss_pred hhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcc
Confidence 32 3567999999999999987655554332357777776543
No 142
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=97.38 E-value=0.00098 Score=84.02 Aligned_cols=141 Identities=19% Similarity=0.171 Sum_probs=92.7
Q ss_pred EEEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC---C
Q 000272 187 QRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLT---T 263 (1744)
Q Consensus 187 eRe~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSplt---s 263 (1744)
+|..+...||..|.+-..... .....+..|.+|..+|..|-+...+++.--.-|..+|+-.+..|-||=|.-... .
T Consensus 442 ~r~~~~SkDGt~VPM~Iv~kk-~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~ 520 (712)
T KOG2237|consen 442 ERIEVSSKDGTKVPMFIVYKK-DIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKD 520 (712)
T ss_pred EEEEEecCCCCccceEEEEec-hhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhc
Confidence 455677788887766543321 112345689999999987777777665544456779999999999998765321 1
Q ss_pred CCCCC-cCcHHHHHHHHHHHHhh-CC-CCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhh
Q 000272 264 SRLFT-AADSDDICTAIQFIGKA-RP-WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEE 330 (1744)
Q Consensus 264 prly~-ag~tdDL~aaId~Lrkr-yP-~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~e 330 (1744)
.+... ....+|+.++.+||... |- ..++.+.|+|-||.++..+.-.+|+ .+.++++--+..|+..
T Consensus 521 G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPd--LF~avia~VpfmDvL~ 588 (712)
T KOG2237|consen 521 GRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPD--LFGAVIAKVPFMDVLN 588 (712)
T ss_pred cchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCch--HhhhhhhcCcceehhh
Confidence 22111 12468999999998754 32 3589999999999888777766654 3444444334445543
No 143
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.38 E-value=0.0012 Score=78.81 Aligned_cols=117 Identities=18% Similarity=0.161 Sum_probs=77.5
Q ss_pred ceEEEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhH-HH-----HHHHHHHHhCCcEEEEEcCCCCCC
Q 000272 185 EYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEK-RI-----RLFVCEALRRGFFPVVMNPRGCGG 258 (1744)
Q Consensus 185 ~YeRe~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~s-YI-----r~La~~La~~GYrVVVfD~RGhGg 258 (1744)
.+.|..++. |+..|.---...+ ....+..||++-|- |+..+. ++ ..+...+.+.|-.|++|||||.|.
T Consensus 111 ~~kRv~Iq~-D~~~IDt~~I~~~----~a~~~RWiL~s~GN-g~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~ 184 (365)
T PF05677_consen 111 SVKRVPIQY-DGVKIDTMAIHQP----EAKPQRWILVSNGN-GECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGS 184 (365)
T ss_pred ceeeEEEee-CCEEEEEEEeeCC----CCCCCcEEEEEcCC-hHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCcccc
Confidence 456777776 6654432111111 12345688998885 444444 12 234455566899999999999999
Q ss_pred CCCCCCCCCCcCcHHHHHHHHHHHHhhC---CCCcEEEEEecHHHHHHHHHHHHh
Q 000272 259 SPLTTSRLFTAADSDDICTAIQFIGKAR---PWTTLMSVGWGYGANMLTKYLAEV 310 (1744)
Q Consensus 259 Spltsprly~ag~tdDL~aaId~Lrkry---P~spIvLVGhSMGG~IaL~YLae~ 310 (1744)
|.+... ......|..++++|++.+. ....|++.|||+||.++...+..+
T Consensus 185 S~G~~s---~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 185 STGPPS---RKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred CCCCCC---HHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 864432 2445789999999998643 235899999999999988766553
No 144
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=97.34 E-value=0.00035 Score=77.84 Aligned_cols=122 Identities=19% Similarity=0.232 Sum_probs=83.6
Q ss_pred CCcEEEEE-ecCCCccccccCCCcEEEEEcCCCCCchhH-HHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcH
Q 000272 195 DGGVISLD-WPSNLDLHEEHGLDTTLLLVPGTAEGSIEK-RIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADS 272 (1744)
Q Consensus 195 DGG~IaLD-W~~p~~~~~~~g~~P~VVLLHGltGGS~~s-YIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~t 272 (1744)
-|+.-.+| |+.. ...+..|++||+.+--... .....+..+.++||+|+.+++- .++. .+ .-....
T Consensus 52 ~~g~q~VDIwg~~-------~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~---l~~q--~h-tL~qt~ 118 (270)
T KOG4627|consen 52 EGGRQLVDIWGST-------NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYN---LCPQ--VH-TLEQTM 118 (270)
T ss_pred CCCceEEEEecCC-------CCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccC---cCcc--cc-cHHHHH
Confidence 34444556 6532 2468999999965432222 2335677889999999998773 2221 11 112235
Q ss_pred HHHHHHHHHHHhhCCCCc-EEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhh
Q 000272 273 DDICTAIQFIGKARPWTT-LMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEE 330 (1744)
Q Consensus 273 dDL~aaId~LrkryP~sp-IvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~e 330 (1744)
.|+.+-++++.+.+++.+ +.+-|||.|+.+++..+.+.- +.++.|+++.|..+++.+
T Consensus 119 ~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r-~prI~gl~l~~GvY~l~E 176 (270)
T KOG4627|consen 119 TQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQR-SPRIWGLILLCGVYDLRE 176 (270)
T ss_pred HHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhc-CchHHHHHHHhhHhhHHH
Confidence 788899999999988664 567799999999999998853 346888888888777765
No 145
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.33 E-value=0.0032 Score=71.91 Aligned_cols=226 Identities=12% Similarity=0.099 Sum_probs=113.7
Q ss_pred EEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCC--CcEEEEE
Q 000272 218 TLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPW--TTLMSVG 295 (1744)
Q Consensus 218 ~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~--spIvLVG 295 (1744)
++|++=||. |+...++..++....+.|+.++++-.+-..-. .+. .....-+..+++.+.+.... .++++..
T Consensus 1 plvvl~gW~-gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~---~~~---~~~~~~~~~l~~~l~~~~~~~~~~il~H~ 73 (240)
T PF05705_consen 1 PLVVLLGWM-GAKPKHLAKYSDLYQDPGFDILLVTSPPADFF---WPS---KRLAPAADKLLELLSDSQSASPPPILFHS 73 (240)
T ss_pred CEEEEEeCC-CCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHe---eec---cchHHHHHHHHHHhhhhccCCCCCEEEEE
Confidence 366777887 46666777777777779999999876532111 010 11122333444555443222 2899999
Q ss_pred ecHHHHHHHHHHHH---h----CCCCC-ceEEEEecCCCChhhhhccCchhHHhHHHHHHHHHHHHHhhhhhhhccCCCc
Q 000272 296 WGYGANMLTKYLAE---V----GERTP-LTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRAKGF 367 (1744)
Q Consensus 296 hSMGG~IaL~YLae---~----ge~s~-L~AaVlISpP~Dl~es~~slp~~~ly~~~L~~~Lk~~L~r~~~lf~~~~~~~ 367 (1744)
+|+||...+..+.+ . +...+ ++|.|.-|+|-........ ..+...+...-...+.....
T Consensus 74 FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~--------- 140 (240)
T PF05705_consen 74 FSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSA----RAFSAALPKSSPRWFVPLWP--------- 140 (240)
T ss_pred EECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHH----HHHHHHcCccchhhHHHHHH---------
Confidence 99999888887663 1 11123 8888888877543321000 00000000000000000000
Q ss_pred CHHHHhhhhcHHHHHHHHhhhccchhhHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHH---HHHhcCCCeEE
Q 000272 368 DVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPR---SSIAENPFTSL 443 (1744)
Q Consensus 368 Did~vlkarTirEFDd~~tap~~Gf~sv~eYY~~aS~~~~L~~IkVPVLIIhG-DDp~VP~~aip~---~la~~nPnv~L 443 (1744)
+. ...+... .......++.....+++..-.........+|-|+|.+ .|+++|.+.+.. +..+..-.+..
T Consensus 141 ----~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~ 213 (240)
T PF05705_consen 141 ----LL-QFLLRLS--IISYFIFGYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRA 213 (240)
T ss_pred ----HH-HHHHHHH--HHHHHHhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEE
Confidence 00 0000000 0001122334444444443222334455699999999 999999765532 22223334667
Q ss_pred EEecCCCccccCCCCchhHHHHHHHHHHH
Q 000272 444 LLCSCLPSSVIGGGRAAESWCQNLVIEWL 472 (1744)
Q Consensus 444 vLt~gGHH~gF~e~~~~~sWv~r~VlEFL 472 (1744)
..+++..|+..... .+.. +.+.+.+|+
T Consensus 214 ~~f~~S~HV~H~r~-~p~~-Y~~~v~~fw 240 (240)
T PF05705_consen 214 EKFEDSPHVAHLRK-HPDR-YWRAVDEFW 240 (240)
T ss_pred ecCCCCchhhhccc-CHHH-HHHHHHhhC
Confidence 77788888766542 2333 346666663
No 146
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=97.28 E-value=0.0042 Score=68.41 Aligned_cols=92 Identities=15% Similarity=0.155 Sum_probs=54.9
Q ss_pred cEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEEEEe
Q 000272 217 TTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGW 296 (1744)
Q Consensus 217 P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIvLVGh 296 (1744)
+.+|++||+.+++ ..+|+..-+..... +-.+++ ..+..-..+|..+.++.-.... ..+.++|+|
T Consensus 3 ~~~lIVpG~~~Sg-~~HWq~~we~~l~~---a~rveq-----------~~w~~P~~~dWi~~l~~~v~a~-~~~~vlVAH 66 (181)
T COG3545 3 TDVLIVPGYGGSG-PNHWQSRWESALPN---ARRVEQ-----------DDWEAPVLDDWIARLEKEVNAA-EGPVVLVAH 66 (181)
T ss_pred ceEEEecCCCCCC-hhHHHHHHHhhCcc---chhccc-----------CCCCCCCHHHHHHHHHHHHhcc-CCCeEEEEe
Confidence 5699999986544 44433322221111 111222 1122223455555554332222 357999999
Q ss_pred cHHHHHHHHHHHHhCCCCCceEEEEecCCC
Q 000272 297 GYGANMLTKYLAEVGERTPLTAVTCIDNPF 326 (1744)
Q Consensus 297 SMGG~IaL~YLae~ge~s~L~AaVlISpP~ 326 (1744)
|+|...+++|+.+... +|.|++++++|.
T Consensus 67 SLGc~~v~h~~~~~~~--~V~GalLVAppd 94 (181)
T COG3545 67 SLGCATVAHWAEHIQR--QVAGALLVAPPD 94 (181)
T ss_pred cccHHHHHHHHHhhhh--ccceEEEecCCC
Confidence 9999999999988654 799999998764
No 147
>COG4449 Predicted protease of the Abi (CAAX) family [General function prediction only]
Probab=97.23 E-value=0.0002 Score=86.27 Aligned_cols=79 Identities=20% Similarity=0.059 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHhhHHHHHhhcCCchhhHHHHH--HHhHhcC----Cc----------chHH-HHHHHHHHHHHHHHhc
Q 000272 1605 TVVVLVEELLFRSWLPEEIAADLDYHRGIIISGL--AFALSQR----SP----------QAIP-GLWLLSLALAGVRQRS 1667 (1744)
Q Consensus 1605 llv~l~EELLFRG~L~~~L~~~~g~~~AIIISSL--LFALlHl----sl----------~~~i-~lfLlGLvLa~aylrt 1667 (1744)
+.-+++|||+||-.|+..=.+...+|..+.+.-. +|-|+|- ++ +.|+ ..-++|+..+..|..
T Consensus 717 l~PAl~EElvFRvvLlP~P~E~r~~W~tl~a~~~l~LfvLyHplnA~T~y~rg~PvFf~PiFL~ltglLGL~Ctvty~v- 795 (827)
T COG4449 717 LIPALGEELVFRVVLLPGPGEGRRPWVTLGAATGLVLFVLYHPLNALTFYPRGAPVFFRPIFLLLTGLLGLGCTVTYRV- 795 (827)
T ss_pred ehhhccccceeEEEecCCCCccccchHhHHHHHHHHHHHHhhhhhhhhccccCCcceeccHHHHHHHHHhhhhhhhHHh-
Confidence 3348999999999999765555446665555444 8999997 11 1222 234678888888887
Q ss_pred CCcchHHHHHHhHHhhh
Q 000272 1668 QGSLSVPIGLRTGIMAS 1684 (1744)
Q Consensus 1668 tGSLWlpIGLHagWn~~ 1684 (1744)
|||||..+.+|++.+..
T Consensus 796 T~SlW~iV~lHW~vVvV 812 (827)
T COG4449 796 TGSLWPIVLLHWAVVVV 812 (827)
T ss_pred ccchHHHHHHHHHHHHH
Confidence 79999999999876543
No 148
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.18 E-value=0.0015 Score=74.18 Aligned_cols=113 Identities=13% Similarity=0.065 Sum_probs=68.7
Q ss_pred CCCcEEEEEcCCCCCchhH-HHHHHHHHHHhCC----cEEEEEcCCCCCCC--CCCCC-----CCCCcC---cH-HHH-H
Q 000272 214 GLDTTLLLVPGTAEGSIEK-RIRLFVCEALRRG----FFPVVMNPRGCGGS--PLTTS-----RLFTAA---DS-DDI-C 276 (1744)
Q Consensus 214 g~~P~VVLLHGltGGS~~s-YIr~La~~La~~G----YrVVVfD~RGhGgS--pltsp-----rly~ag---~t-dDL-~ 276 (1744)
..-|+|+++||. ++.... .+...+..+...| .-+|+++.-+.+.. ....+ ...... .. +.+ .
T Consensus 22 ~~~PvlylldG~-~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 100 (251)
T PF00756_consen 22 KPYPVLYLLDGQ-SGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTE 100 (251)
T ss_dssp TTEEEEEEESHT-THHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHT
T ss_pred CCCEEEEEccCC-ccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhc
Confidence 456889999995 211111 1333344444443 55677777655411 10000 011111 11 222 3
Q ss_pred HHHHHHHhhCCCC--cEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChh
Q 000272 277 TAIQFIGKARPWT--TLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLE 329 (1744)
Q Consensus 277 aaId~LrkryP~s--pIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~ 329 (1744)
+++.+|.++|+.. +..++|+||||..++.++.++|+ .+.+++++|+.++..
T Consensus 101 el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd--~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 101 ELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPD--LFGAVIAFSGALDPS 153 (251)
T ss_dssp HHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTT--TESEEEEESEESETT
T ss_pred cchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCcc--ccccccccCcccccc
Confidence 7778888888633 27999999999999999999987 688999998776654
No 149
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.16 E-value=0.0035 Score=70.78 Aligned_cols=107 Identities=18% Similarity=0.174 Sum_probs=81.2
Q ss_pred CcEEEEEcCCCCC-chhHHHHHHHHHHHhCCcEEEEEcCCC----CCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCc
Q 000272 216 DTTLLLVPGTAEG-SIEKRIRLFVCEALRRGFFPVVMNPRG----CGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTT 290 (1744)
Q Consensus 216 ~P~VVLLHGltGG-S~~sYIr~La~~La~~GYrVVVfD~RG----hGgSpltsprly~ag~tdDL~aaId~LrkryP~sp 290 (1744)
...||++-|++.| -...|...++.++.+.+|-.|-+-.|- +|-+.+ -.+.+|+..+|+||...--...
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~sl-------k~D~edl~~l~~Hi~~~~fSt~ 108 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSL-------KDDVEDLKCLLEHIQLCGFSTD 108 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccccc-------cccHHHHHHHHHHhhccCcccc
Confidence 3568888887443 224589999999999999999988773 332221 2467999999999977655668
Q ss_pred EEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChh
Q 000272 291 LMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLE 329 (1744)
Q Consensus 291 IvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~ 329 (1744)
++++|||.|-.=++.|+...-....+.++|+.+|.-|..
T Consensus 109 vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 109 VVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred eEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 999999999999999995543334588888888877765
No 150
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=97.13 E-value=0.011 Score=82.17 Aligned_cols=101 Identities=10% Similarity=0.098 Sum_probs=65.5
Q ss_pred CCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCc-CcHHHHHHHHHHHHhhCCCCcEEE
Q 000272 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTA-ADSDDICTAIQFIGKARPWTTLMS 293 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~a-g~tdDL~aaId~LrkryP~spIvL 293 (1744)
.+++++++||+. |+.. .++.++..+ ..+|+|++++.+|++... +..+.. ...+|+.+.+. ...+..++.+
T Consensus 1067 ~~~~l~~lh~~~-g~~~-~~~~l~~~l-~~~~~v~~~~~~g~~~~~---~~~~~l~~la~~~~~~i~---~~~~~~p~~l 1137 (1296)
T PRK10252 1067 DGPTLFCFHPAS-GFAW-QFSVLSRYL-DPQWSIYGIQSPRPDGPM---QTATSLDEVCEAHLATLL---EQQPHGPYHL 1137 (1296)
T ss_pred CCCCeEEecCCC-CchH-HHHHHHHhc-CCCCcEEEEECCCCCCCC---CCCCCHHHHHHHHHHHHH---hhCCCCCEEE
Confidence 356899999974 4443 345666655 457999999999998642 122221 12234433333 3345568999
Q ss_pred EEecHHHHHHHHHHHHhCCC-CCceEEEEecC
Q 000272 294 VGWGYGANMLTKYLAEVGER-TPLTAVTCIDN 324 (1744)
Q Consensus 294 VGhSMGG~IaL~YLae~ge~-s~L~AaVlISp 324 (1744)
+||||||.++..++.+..+. ..+..++++.+
T Consensus 1138 ~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1138 LGYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred EEechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 99999999999998764221 25666666653
No 151
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.11 E-value=0.0019 Score=74.35 Aligned_cols=109 Identities=17% Similarity=0.281 Sum_probs=76.9
Q ss_pred cEEEEEcCCCCCchhHHHHHHHHHHHhCC-----cEEEEEcCCCCCCCCCC------CC---------CCCCcCcHHHHH
Q 000272 217 TTLLLVPGTAEGSIEKRIRLFVCEALRRG-----FFPVVMNPRGCGGSPLT------TS---------RLFTAADSDDIC 276 (1744)
Q Consensus 217 P~VVLLHGltGGS~~sYIr~La~~La~~G-----YrVVVfD~RGhGgSplt------sp---------rly~ag~tdDL~ 276 (1744)
-|.|++||. ||+..+ +..++.++...+ --++..|--|.-..... .| +.....+..=+.
T Consensus 46 iPTIfIhGs-gG~asS-~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk 123 (288)
T COG4814 46 IPTIFIHGS-GGTASS-LNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLK 123 (288)
T ss_pred cceEEEecC-CCChhH-HHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHH
Confidence 468999997 555544 556777777664 23566666662111110 01 000111234578
Q ss_pred HHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCC---CceEEEEecCCCC
Q 000272 277 TAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERT---PLTAVTCIDNPFD 327 (1744)
Q Consensus 277 aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s---~L~AaVlISpP~D 327 (1744)
.++.||.++|....+.+|||||||.-+..|+..++.+. ++...|.++.||+
T Consensus 124 ~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 124 KAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 89999999999999999999999999999999998653 5899999999998
No 152
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=96.94 E-value=0.0017 Score=81.37 Aligned_cols=128 Identities=13% Similarity=0.002 Sum_probs=76.9
Q ss_pred CCcEEEEEecCCCccccccCCCcEEEEEcCCCC--CchhHHHHHHHHHHHh-CC-cEEEEEcCC-CCCCCCCC-CCC-CC
Q 000272 195 DGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAE--GSIEKRIRLFVCEALR-RG-FFPVVMNPR-GCGGSPLT-TSR-LF 267 (1744)
Q Consensus 195 DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltG--GS~~sYIr~La~~La~-~G-YrVVVfD~R-GhGgSplt-spr-ly 267 (1744)
+...+.++.+.|... ......|+||++||+.. |+...+ ....++. .+ +.||.+|+| |..+-... ... ..
T Consensus 75 sEdcl~l~i~~p~~~-~~~~~~pv~v~ihGG~~~~g~~~~~---~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~ 150 (493)
T cd00312 75 SEDCLYLNVYTPKNT-KPGNSLPVMVWIHGGGFMFGSGSLY---PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPG 150 (493)
T ss_pred CCcCCeEEEEeCCCC-CCCCCCCEEEEEcCCccccCCCCCC---ChHHHHhcCCCEEEEEecccccccccccCCCCCCCc
Confidence 344677776655321 11245699999999421 122222 1223333 33 999999999 54322111 111 11
Q ss_pred CcCcHHHHHHHHHHHHhh---CC--CCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCC
Q 000272 268 TAADSDDICTAIQFIGKA---RP--WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFD 327 (1744)
Q Consensus 268 ~ag~tdDL~aaId~Lrkr---yP--~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~D 327 (1744)
+. -..|...+++|+++. ++ ..++.++|+|.||..+..++........+.++|++|....
T Consensus 151 n~-g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 151 NY-GLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred ch-hHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 11 257999999999875 22 3589999999999988877765322335788888876554
No 153
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.91 E-value=0.0048 Score=72.11 Aligned_cols=102 Identities=14% Similarity=0.157 Sum_probs=72.5
Q ss_pred cEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcH-HHHHHHHHHHHhhCCCCcEEEEE
Q 000272 217 TTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADS-DDICTAIQFIGKARPWTTLMSVG 295 (1744)
Q Consensus 217 P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~t-dDL~aaId~LrkryP~spIvLVG 295 (1744)
|+|+++||. +|... .+..|+.++... +.|+.++.||.+... ...... +-+.+.++.|++..|..|++++|
T Consensus 1 ~pLF~fhp~-~G~~~-~~~~L~~~l~~~-~~v~~l~a~g~~~~~------~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G 71 (257)
T COG3319 1 PPLFCFHPA-GGSVL-AYAPLAAALGPL-LPVYGLQAPGYGAGE------QPFASLDDMAAAYVAAIRRVQPEGPYVLLG 71 (257)
T ss_pred CCEEEEcCC-CCcHH-HHHHHHHHhccC-ceeeccccCcccccc------cccCCHHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 579999996 44433 345667666666 999999999998521 112223 44567778888889999999999
Q ss_pred ecHHHHHHHHHHHHhCCC-CCceEEEEecCCCC
Q 000272 296 WGYGANMLTKYLAEVGER-TPLTAVTCIDNPFD 327 (1744)
Q Consensus 296 hSMGG~IaL~YLae~ge~-s~L~AaVlISpP~D 327 (1744)
||+||+++...+.+--.. ..+.-++++.++..
T Consensus 72 ~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 72 WSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred eccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999999888663221 24667777766555
No 154
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=96.86 E-value=0.0029 Score=71.80 Aligned_cols=41 Identities=10% Similarity=0.117 Sum_probs=25.0
Q ss_pred CcEEEEEecHHHHHHHHHHHHhCCC----C------CceEEEEecCCCChh
Q 000272 289 TTLMSVGWGYGANMLTKYLAEVGER----T------PLTAVTCIDNPFDLE 329 (1744)
Q Consensus 289 spIvLVGhSMGG~IaL~YLae~ge~----s------~L~AaVlISpP~Dl~ 329 (1744)
.+|.+|||||||.++-.++...... . .....+.++.|.-..
T Consensus 78 ~~IsfIgHSLGGli~r~al~~~~~~~~~~~~~~~~~~~~~fitlatPH~G~ 128 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYALGLLHDKPQYFPGFFQKIKPHNFITLATPHLGS 128 (217)
T ss_pred ccceEEEecccHHHHHHHHHHhhhccccccccccceeeeeEEEeCCCCCCC
Confidence 5899999999997765444432211 0 233445667776544
No 155
>PRK04940 hypothetical protein; Provisional
Probab=96.85 E-value=0.042 Score=61.31 Aligned_cols=36 Identities=14% Similarity=0.107 Sum_probs=28.4
Q ss_pred CcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChh
Q 000272 289 TTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLE 329 (1744)
Q Consensus 289 spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~ 329 (1744)
.++.+||.||||..+...+.+++ + .+|++.|.....
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g----~-~aVLiNPAv~P~ 95 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG----I-RQVIFNPNLFPE 95 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC----C-CEEEECCCCChH
Confidence 47899999999999998887775 3 477887776553
No 156
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=96.83 E-value=0.046 Score=68.55 Aligned_cols=123 Identities=13% Similarity=0.093 Sum_probs=76.9
Q ss_pred cCCcceEEEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEc------CCCCCchhHHHHHHHHHHHhCCcEEEEEcCC
Q 000272 181 EGKLEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVP------GTAEGSIEKRIRLFVCEALRRGFFPVVMNPR 254 (1744)
Q Consensus 181 ~p~V~YeRe~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLH------GltGGS~~sYIr~La~~La~~GYrVVVfD~R 254 (1744)
..++.|.=..|.-+.|..+ ....+|.||+=| |+ ||-. -..-+-.+++.|+-|+.+-+.
T Consensus 46 ~rPvNYaLlrI~pp~~~~~------------d~~krP~vViDPRAGHGpGI-GGFK---~dSevG~AL~~GHPvYFV~F~ 109 (581)
T PF11339_consen 46 PRPVNYALLRITPPEGVPV------------DPTKRPFVVIDPRAGHGPGI-GGFK---PDSEVGVALRAGHPVYFVGFF 109 (581)
T ss_pred CCCcceeEEEeECCCCCCC------------CCCCCCeEEeCCCCCCCCCc-cCCC---cccHHHHHHHcCCCeEEEEec
Confidence 4568887666665555211 112345555532 33 2211 123455667789999988774
Q ss_pred CCCCCCCCCCCCCCcCcHHHH----HHHHHHHHhhCCCC-cEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChh
Q 000272 255 GCGGSPLTTSRLFTAADSDDI----CTAIQFIGKARPWT-TLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLE 329 (1744)
Q Consensus 255 GhGgSpltsprly~ag~tdDL----~aaId~LrkryP~s-pIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~ 329 (1744)
=. +.|. ...+|+ .+.++.+..++|.. +..++|-+-||..++.|++.+|+ .+.-+|+-++|.+..
T Consensus 110 p~-----P~pg----QTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd--~~gplvlaGaPlsyw 178 (581)
T PF11339_consen 110 PE-----PEPG----QTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPD--LVGPLVLAGAPLSYW 178 (581)
T ss_pred CC-----CCCC----CcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcC--ccCceeecCCCcccc
Confidence 11 1111 234554 45566677788866 88999999999999999999987 345556667787776
Q ss_pred h
Q 000272 330 E 330 (1744)
Q Consensus 330 e 330 (1744)
.
T Consensus 179 a 179 (581)
T PF11339_consen 179 A 179 (581)
T ss_pred c
Confidence 5
No 157
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.81 E-value=0.0052 Score=73.97 Aligned_cols=95 Identities=17% Similarity=0.203 Sum_probs=68.4
Q ss_pred CCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcE--EEEEcCCCCCCCC-CCCCCCCCcCcHHHHHHHHHHHHhhCCCCcE
Q 000272 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFF--PVVMNPRGCGGSP-LTTSRLFTAADSDDICTAIQFIGKARPWTTL 291 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sYIr~La~~La~~GYr--VVVfD~RGhGgSp-ltsprly~ag~tdDL~aaId~LrkryP~spI 291 (1744)
.+..+|++||+.. +-+.-+..+++-....|+. +|+|-|+--|..- ..-.+..+-...++|+.+|.+|....+..+|
T Consensus 115 ~k~vlvFvHGfNn-tf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I 193 (377)
T COG4782 115 AKTVLVFVHGFNN-TFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRI 193 (377)
T ss_pred CCeEEEEEcccCC-chhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceE
Confidence 4578999999843 4444466777777777765 8999998776421 0011111112247999999999998888899
Q ss_pred EEEEecHHHHHHHHHHHHh
Q 000272 292 MSVGWGYGANMLTKYLAEV 310 (1744)
Q Consensus 292 vLVGhSMGG~IaL~YLae~ 310 (1744)
++++||||..+++..+.+.
T Consensus 194 ~ilAHSMGtwl~~e~LrQL 212 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQL 212 (377)
T ss_pred EEEEecchHHHHHHHHHHH
Confidence 9999999999998887653
No 158
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=96.79 E-value=0.015 Score=73.41 Aligned_cols=142 Identities=13% Similarity=0.024 Sum_probs=86.0
Q ss_pred CcceEEEEEEcCC---CcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHH-----------------HHHH
Q 000272 183 KLEYQRVCVNTED---GGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFV-----------------CEAL 242 (1744)
Q Consensus 183 ~V~YeRe~L~t~D---GG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La-----------------~~La 242 (1744)
.+....-++++.+ +..+.+..+... ....++|+||+++|++|+|... -.+. .+..
T Consensus 44 ~~~~~sGy~~v~~~~~~~~lFyw~~~s~---~~~~~~Pl~lwlnGGPG~ss~~--G~f~E~GP~~i~~~~~~~~~n~~sW 118 (462)
T PTZ00472 44 SVNQWSGYFDIPGNQTDKHYFYWAFGPR---NGNPEAPVLLWMTGGPGCSSMF--ALLAENGPCLMNETTGDIYNNTYSW 118 (462)
T ss_pred CCcceeEEEEeCCCCCCceEEEEEEEcC---CCCCCCCEEEEECCCCcHHHHH--hhhccCCCeEEeCCCCceeECCccc
Confidence 3444456677754 455655334322 2234679999999987755321 1110 0011
Q ss_pred hCCcEEEEEcC-CCCCCCCCCCCCCC--CcCcHHHHHHHHHHHHhhCCC---CcEEEEEecHHHHHHHHHHHHhC-----
Q 000272 243 RRGFFPVVMNP-RGCGGSPLTTSRLF--TAADSDDICTAIQFIGKARPW---TTLMSVGWGYGANMLTKYLAEVG----- 311 (1744)
Q Consensus 243 ~~GYrVVVfD~-RGhGgSpltsprly--~ag~tdDL~aaId~LrkryP~---spIvLVGhSMGG~IaL~YLae~g----- 311 (1744)
.+-..++.+|. +|+|.|........ .....+|+.+++....+++|. .+++++|+||||..+-.++.+.-
T Consensus 119 ~~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~ 198 (462)
T PTZ00472 119 NNEAYVIYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKK 198 (462)
T ss_pred ccccCeEEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccc
Confidence 12267888885 69998854332211 122358999999887777774 79999999999999877776531
Q ss_pred ---CCCCceEEEEecCCCChh
Q 000272 312 ---ERTPLTAVTCIDNPFDLE 329 (1744)
Q Consensus 312 ---e~s~L~AaVlISpP~Dl~ 329 (1744)
....++++++..+..+..
T Consensus 199 ~~~~~inLkGi~IGNg~~dp~ 219 (462)
T PTZ00472 199 GDGLYINLAGLAVGNGLTDPY 219 (462)
T ss_pred cCCceeeeEEEEEeccccChh
Confidence 113577766655544543
No 159
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=96.63 E-value=0.0039 Score=76.83 Aligned_cols=88 Identities=13% Similarity=0.083 Sum_probs=67.5
Q ss_pred HHHHHHHHHHhCCcEE-----EE-EcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHH
Q 000272 233 RIRLFVCEALRRGFFP-----VV-MNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKY 306 (1744)
Q Consensus 233 YIr~La~~La~~GYrV-----VV-fD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~Y 306 (1744)
|+..+++.|.+.||+. .+ ||+|= ++. ........|...|+.+.+.. ..++++|||||||.++..+
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~---~~~-----~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~f 136 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRL---SPA-----ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYF 136 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhh---chh-----hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHH
Confidence 6788999999988863 23 78882 221 11234578899999887776 6899999999999999999
Q ss_pred HHHhCCC----CCceEEEEecCCCChh
Q 000272 307 LAEVGER----TPLTAVTCIDNPFDLE 329 (1744)
Q Consensus 307 Lae~ge~----s~L~AaVlISpP~Dl~ 329 (1744)
+...+.. ..|.+.|.+++||...
T Consensus 137 l~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 137 LQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred HHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 9887543 3699999999999754
No 160
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.51 E-value=0.043 Score=71.03 Aligned_cols=104 Identities=16% Similarity=0.233 Sum_probs=59.8
Q ss_pred CCcEEEEEcCCCCCchhHHHHHHHHHHHh----------------CCcEEEEEcCCCCCCCCCCCCCCCCc----CcHHH
Q 000272 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALR----------------RGFFPVVMNPRGCGGSPLTTSRLFTA----ADSDD 274 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sYIr~La~~La~----------------~GYrVVVfD~RGhGgSpltsprly~a----g~tdD 274 (1744)
.+-||+++||-.| |-.. +|.++..++. ..|+..+.|+-+= .+ .++. ..++-
T Consensus 88 sGIPVLFIPGNAG-SyKQ-vRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe----~t---Am~G~~l~dQtEY 158 (973)
T KOG3724|consen 88 SGIPVLFIPGNAG-SYKQ-VRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE----FT---AMHGHILLDQTEY 158 (973)
T ss_pred CCceEEEecCCCC-chHH-HHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch----hh---hhccHhHHHHHHH
Confidence 4678999999754 4332 6777665552 1244455554220 00 0111 13456
Q ss_pred HHHHHHHHHhhCCC---------CcEEEEEecHHHHHHHHHHHHhCCC--CCceEEEEecCCCCh
Q 000272 275 ICTAIQFIGKARPW---------TTLMSVGWGYGANMLTKYLAEVGER--TPLTAVTCIDNPFDL 328 (1744)
Q Consensus 275 L~aaId~LrkryP~---------spIvLVGhSMGG~IaL~YLae~ge~--s~L~AaVlISpP~Dl 328 (1744)
+..+|.+|.+.|.. ..+++|||||||.++...+.- ++. ..+.-++..++|...
T Consensus 159 V~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tl-kn~~~~sVntIITlssPH~a 222 (973)
T KOG3724|consen 159 VNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTL-KNEVQGSVNTIITLSSPHAA 222 (973)
T ss_pred HHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhh-hhhccchhhhhhhhcCcccC
Confidence 67778887765532 248999999999887665543 321 235555666666543
No 161
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=96.47 E-value=0.01 Score=67.30 Aligned_cols=73 Identities=16% Similarity=0.099 Sum_probs=43.2
Q ss_pred CcchhcCcCC-ccEEEEEe-CCCCCCCCChHH-HHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHH
Q 000272 403 STRSVVGNIK-IPVLFIQN-DAGAVPPFSIPR-SSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAV 475 (1744)
Q Consensus 403 S~~~~L~~Ik-VPVLIIhG-DDp~VP~~aip~-~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av 475 (1744)
+....+..|. +|+|++|| +|..+|...... ............++++++|...........-..+.+.+||.+.
T Consensus 222 d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 222 DPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred cchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 3344555665 79999999 999999654322 2222221456667777777665422111112347788888754
No 162
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=96.36 E-value=0.013 Score=69.26 Aligned_cols=106 Identities=13% Similarity=0.193 Sum_probs=69.6
Q ss_pred cCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCC------CC-CC---------CC-------CCc
Q 000272 213 HGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSP------LT-TS---------RL-------FTA 269 (1744)
Q Consensus 213 ~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSp------lt-sp---------rl-------y~a 269 (1744)
.+.-|+||+-||+ ||+++-| ..++-.++.+||-|.++.+|.+..+- .. .+ +. ++.
T Consensus 115 ~~k~PvvvFSHGL-ggsRt~Y-Sa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~i 192 (399)
T KOG3847|consen 115 NDKYPVVVFSHGL-GGSRTLY-SAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHI 192 (399)
T ss_pred CCCccEEEEeccc-ccchhhH-HHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEe
Confidence 3467899999997 6787765 47788899999999999999887551 10 00 00 111
Q ss_pred C------cHHHHHHHHHHHHhh-----------------------CCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEE
Q 000272 270 A------DSDDICTAIQFIGKA-----------------------RPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVT 320 (1744)
Q Consensus 270 g------~tdDL~aaId~Lrkr-----------------------yP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaV 320 (1744)
. ....+..++.-|++- ..-+++.++|||+||..++..++.+ ..++++|
T Consensus 193 rNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~---t~FrcaI 269 (399)
T KOG3847|consen 193 RNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH---TDFRCAI 269 (399)
T ss_pred eCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc---cceeeee
Confidence 1 123444444444331 1124688999999998887777653 4578887
Q ss_pred Eec
Q 000272 321 CID 323 (1744)
Q Consensus 321 lIS 323 (1744)
++.
T Consensus 270 ~lD 272 (399)
T KOG3847|consen 270 ALD 272 (399)
T ss_pred eee
Confidence 763
No 163
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=96.36 E-value=0.0089 Score=74.95 Aligned_cols=129 Identities=12% Similarity=-0.021 Sum_probs=73.6
Q ss_pred CcEEEEEecCCCccccccCCCcEEEEEcCC--CCCchhHHHHHHHHHHHhCCcEEEEEcCC----CCCCCCCCCCCCCCc
Q 000272 196 GGVISLDWPSNLDLHEEHGLDTTLLLVPGT--AEGSIEKRIRLFVCEALRRGFFPVVMNPR----GCGGSPLTTSRLFTA 269 (1744)
Q Consensus 196 GG~IaLDW~~p~~~~~~~g~~P~VVLLHGl--tGGS~~sYIr~La~~La~~GYrVVVfD~R----GhGgSpltsprly~a 269 (1744)
...+.|+.+.|.... ....-|++|++||+ ..|+.......-...++..+.-||.+||| |+-.++.......++
T Consensus 106 EDCL~LnI~~P~~~~-~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~ 184 (535)
T PF00135_consen 106 EDCLYLNIYTPSNAS-SNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNY 184 (535)
T ss_dssp S---EEEEEEETSSS-STTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTH
T ss_pred chHHHHhhhhccccc-cccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhh
Confidence 346778766553211 11246999999984 22232111222334567789999999999 554332211111122
Q ss_pred CcHHHHHHHHHHHHhhC---C--CCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCC
Q 000272 270 ADSDDICTAIQFIGKAR---P--WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPF 326 (1744)
Q Consensus 270 g~tdDL~aaId~Lrkry---P--~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~ 326 (1744)
+ ..|...+|+|+++.- + ..+|.++|+|.||..+...+..-..+..+.++|+.|+..
T Consensus 185 G-l~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 185 G-LLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp H-HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred h-hhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 2 479999999998753 2 258999999999988877776633345699999998743
No 164
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=96.32 E-value=0.02 Score=72.49 Aligned_cols=138 Identities=22% Similarity=0.129 Sum_probs=92.5
Q ss_pred cceEEEEEEcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q 000272 184 LEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTT 263 (1744)
Q Consensus 184 V~YeRe~L~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSplts 263 (1744)
..-+...-+..||..|.|-.... . .... ..|++|.-.|+.+-+...+........+++|...|.-|.||-|.-.
T Consensus 392 ~~veQ~~atSkDGT~IPYFiv~K-~-~~~d-~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfG--- 465 (648)
T COG1505 392 YEVEQFFATSKDGTRIPYFIVRK-G-AKKD-ENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFG--- 465 (648)
T ss_pred ceEEEEEEEcCCCccccEEEEec-C-CcCC-CCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccC---
Confidence 33355556678999998754431 1 1112 5688888777655555554333336778899999999999988642
Q ss_pred CCCCCc-------CcHHHHHHHHHHHHhhCC--CCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChh
Q 000272 264 SRLFTA-------ADSDDICTAIQFIGKARP--WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLE 329 (1744)
Q Consensus 264 prly~a-------g~tdDL~aaId~LrkryP--~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~ 329 (1744)
|....+ .-.+|+.++.+.+.++.= ..++.+.|-|=||.++...+.++|+ .+.|+||-.|.+|+.
T Consensus 466 p~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPe--lfgA~v~evPllDMl 538 (648)
T COG1505 466 PEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPE--LFGAAVCEVPLLDML 538 (648)
T ss_pred HHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChh--hhCceeeccchhhhh
Confidence 211111 125899999999876631 2479999999999998888888876 466666665655654
No 165
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=96.26 E-value=0.06 Score=64.71 Aligned_cols=109 Identities=19% Similarity=0.237 Sum_probs=73.3
Q ss_pred CCcEEEEEcCCCCCchh--HHHHHHHHHHHhCCcEEEEEcCCCC--CCCCCC-----------CCCC-------------
Q 000272 215 LDTTLLLVPGTAEGSIE--KRIRLFVCEALRRGFFPVVMNPRGC--GGSPLT-----------TSRL------------- 266 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~--sYIr~La~~La~~GYrVVVfD~RGh--GgSplt-----------sprl------------- 266 (1744)
....|||+||.. .+.. ..+..+-..|.+.||..+.+..+.- ...+.. ....
T Consensus 86 ~~G~vIilp~~g-~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 164 (310)
T PF12048_consen 86 PQGAVIILPDWG-EHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQ 164 (310)
T ss_pred CceEEEEecCCC-CCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCcccccc
Confidence 456899999973 3332 3577888889999999999999871 111100 0000
Q ss_pred -------CCcCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCC
Q 000272 267 -------FTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPF 326 (1744)
Q Consensus 267 -------y~ag~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~ 326 (1744)
+......-+.+++.++.+ ++..+++++||+.|+.+++.|+++.+. ..+.+.|.|++.+
T Consensus 165 ~~~~~~~~~~~~~ari~Aa~~~~~~-~~~~~ivlIg~G~gA~~~~~~la~~~~-~~~daLV~I~a~~ 229 (310)
T PF12048_consen 165 EAEAREAYEERLFARIEAAIAFAQQ-QGGKNIVLIGHGTGAGWAARYLAEKPP-PMPDALVLINAYW 229 (310)
T ss_pred HhHHhHHHHHHHHHHHHHHHHHHHh-cCCceEEEEEeChhHHHHHHHHhcCCC-cccCeEEEEeCCC
Confidence 000112355666666655 455679999999999999999999764 2478889887654
No 166
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=96.22 E-value=0.031 Score=69.60 Aligned_cols=110 Identities=21% Similarity=0.273 Sum_probs=70.9
Q ss_pred CcEEEEEcCCCCCchhHH-HH--HHHHHHHhCCcEEEEEcCCCCCCCCCCCC------CCCC-cCcHHHHHHHHHHHHhh
Q 000272 216 DTTLLLVPGTAEGSIEKR-IR--LFVCEALRRGFFPVVMNPRGCGGSPLTTS------RLFT-AADSDDICTAIQFIGKA 285 (1744)
Q Consensus 216 ~P~VVLLHGltGGS~~sY-Ir--~La~~La~~GYrVVVfD~RGhGgSpltsp------rly~-ag~tdDL~aaId~Lrkr 285 (1744)
+|++|++-| ++..+.+ +. .+...+.+.|-.++++.||-+|.|..... +..+ ..-..|+...+++++.+
T Consensus 29 gpifl~~gg--E~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~ 106 (434)
T PF05577_consen 29 GPIFLYIGG--EGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKK 106 (434)
T ss_dssp SEEEEEE----SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECC--CCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHh
Confidence 566666644 5666543 21 23445556789999999999999953321 1111 12358999999999976
Q ss_pred C---CCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChh
Q 000272 286 R---PWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLE 329 (1744)
Q Consensus 286 y---P~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~ 329 (1744)
+ +..|++++|-|+||+++..+-..+|+ .+.|+++-|+|....
T Consensus 107 ~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~--~~~ga~ASSapv~a~ 151 (434)
T PF05577_consen 107 YNTAPNSPWIVFGGSYGGALAAWFRLKYPH--LFDGAWASSAPVQAK 151 (434)
T ss_dssp TTTGCC--EEEEEETHHHHHHHHHHHH-TT--T-SEEEEET--CCHC
T ss_pred hcCCCCCCEEEECCcchhHHHHHHHhhCCC--eeEEEEeccceeeee
Confidence 5 45699999999999999999888987 688999999998764
No 167
>COG4099 Predicted peptidase [General function prediction only]
Probab=96.06 E-value=0.025 Score=66.51 Aligned_cols=128 Identities=10% Similarity=0.112 Sum_probs=70.6
Q ss_pred EcCCCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC---CCC
Q 000272 192 NTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSR---LFT 268 (1744)
Q Consensus 192 ~t~DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltspr---ly~ 268 (1744)
...-|..+.|..+.|.+-.+...--|.||++||...++...+ ..+. .|.-.++.+.+-.+ +-...|+ .+.
T Consensus 167 d~~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~-~~l~-----sg~gaiawa~pedq-cfVlAPQy~~if~ 239 (387)
T COG4099 167 DESTGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDND-KVLS-----SGIGAIAWAGPEDQ-CFVLAPQYNPIFA 239 (387)
T ss_pred ccccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhh-hhhh-----cCccceeeecccCc-eEEEccccccccc
Confidence 334577888888876432223333499999999644443332 1221 23233333332222 1000111 111
Q ss_pred cC------cHHHHHHHHH-HHHhhCC--CCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCCh
Q 000272 269 AA------DSDDICTAIQ-FIGKARP--WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDL 328 (1744)
Q Consensus 269 ag------~tdDL~aaId-~LrkryP--~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl 328 (1744)
.. .......+|. -+..+|. ..||+++|.|+||......+-++|+ .+.|++.+|..+|.
T Consensus 240 d~e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPd--fFAaa~~iaG~~d~ 306 (387)
T COG4099 240 DSEEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD--FFAAAVPIAGGGDR 306 (387)
T ss_pred ccccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCch--hhheeeeecCCCch
Confidence 10 0111222232 4445554 4699999999999988888888876 58999999988774
No 168
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.03 E-value=0.07 Score=61.75 Aligned_cols=112 Identities=13% Similarity=0.096 Sum_probs=80.5
Q ss_pred CCCcEEEEEcCCCCCchhHHHHHHHHHHHhC-C--cEEEEEcCCCCCCCCCCCCC---CC---CcCcHHHHHHHHHHHHh
Q 000272 214 GLDTTLLLVPGTAEGSIEKRIRLFVCEALRR-G--FFPVVMNPRGCGGSPLTTSR---LF---TAADSDDICTAIQFIGK 284 (1744)
Q Consensus 214 g~~P~VVLLHGltGGS~~sYIr~La~~La~~-G--YrVVVfD~RGhGgSpltspr---ly---~ag~tdDL~aaId~Lrk 284 (1744)
.+.+.+++++|-+| . ..|...+++++... + +.++++-+-||.+-|..... .. -++..+.+.+-+++++.
T Consensus 27 ~~~~li~~IpGNPG-~-~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~ 104 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPG-L-LGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKE 104 (301)
T ss_pred CCceEEEEecCCCC-c-hhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHH
Confidence 35688999999764 3 34555677766543 2 66999999999877622111 11 12235778889999998
Q ss_pred hCC-CCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCC
Q 000272 285 ARP-WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFD 327 (1744)
Q Consensus 285 ryP-~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~D 327 (1744)
..| +.+++++|||.|+.+++..+-......++..++++-|...
T Consensus 105 ~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIe 148 (301)
T KOG3975|consen 105 YVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIE 148 (301)
T ss_pred hCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHH
Confidence 877 4589999999999999999976555567888888866543
No 169
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=95.96 E-value=0.06 Score=67.11 Aligned_cols=106 Identities=10% Similarity=0.035 Sum_probs=65.0
Q ss_pred CCcEEEEEcCCCCCchhHHHHHHHHHHHhCCc----EEEEEcCCCCCCCCCCCCCCCCc-CcHHHH-HHHHHHHHhhCCC
Q 000272 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGF----FPVVMNPRGCGGSPLTTSRLFTA-ADSDDI-CTAIQFIGKARPW 288 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sYIr~La~~La~~GY----rVVVfD~RGhGgSpltsprly~a-g~tdDL-~aaId~LrkryP~ 288 (1744)
..|+|+++||-... ....+...+..+.+.|. .+|.+|..+.. . ....+.+. ...+.+ .+++.+|.++|+.
T Consensus 208 ~~PvlyllDG~~w~-~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~-~--R~~el~~~~~f~~~l~~eLlP~I~~~y~~ 283 (411)
T PRK10439 208 ERPLAILLDGQFWA-ESMPVWPALDSLTHRGQLPPAVYLLIDAIDTT-H--RSQELPCNADFWLAVQQELLPQVRAIAPF 283 (411)
T ss_pred CCCEEEEEECHHhh-hcCCHHHHHHHHHHcCCCCceEEEEECCCCcc-c--ccccCCchHHHHHHHHHHHHHHHHHhCCC
Confidence 46899999995321 11123344556667774 35677653211 0 11111111 122233 4666788877652
Q ss_pred ----CcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCC
Q 000272 289 ----TTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPF 326 (1744)
Q Consensus 289 ----spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~ 326 (1744)
.+.+++|+||||..++..+.++|+ .+.+++++|+.+
T Consensus 284 ~~d~~~~~IaG~S~GGl~AL~~al~~Pd--~Fg~v~s~Sgs~ 323 (411)
T PRK10439 284 SDDADRTVVAGQSFGGLAALYAGLHWPE--RFGCVLSQSGSF 323 (411)
T ss_pred CCCccceEEEEEChHHHHHHHHHHhCcc--cccEEEEeccce
Confidence 467899999999999999999887 588888888754
No 170
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=95.82 E-value=0.021 Score=69.15 Aligned_cols=108 Identities=15% Similarity=0.192 Sum_probs=73.1
Q ss_pred CcEEEEEcCCCCCchhHHHHHHHHHHHhCCcE---EEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEE
Q 000272 216 DTTLLLVPGTAEGSIEKRIRLFVCEALRRGFF---PVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLM 292 (1744)
Q Consensus 216 ~P~VVLLHGltGGS~~sYIr~La~~La~~GYr---VVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIv 292 (1744)
.-+++++||+ ++... .+..+...+...||- ++.+++++.... . -.....+-+...|+.+....+..++.
T Consensus 59 ~~pivlVhG~-~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~----~~~~~~~ql~~~V~~~l~~~ga~~v~ 130 (336)
T COG1075 59 KEPIVLVHGL-GGGYG-NFLPLDYRLAILGWLTNGVYAFELSGGDGT--Y----SLAVRGEQLFAYVDEVLAKTGAKKVN 130 (336)
T ss_pred CceEEEEccC-cCCcc-hhhhhhhhhcchHHHhcccccccccccCCC--c----cccccHHHHHHHHHHHHhhcCCCceE
Confidence 3479999997 33333 344555556777777 888888765211 0 11122345556666665666667999
Q ss_pred EEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhh
Q 000272 293 SVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEA 331 (1744)
Q Consensus 293 LVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es 331 (1744)
++||||||.++..|+...+....+...+.+++|-.....
T Consensus 131 LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt~~ 169 (336)
T COG1075 131 LIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGTEL 169 (336)
T ss_pred EEeecccchhhHHHHhhcCccceEEEEEEeccCCCCchh
Confidence 999999999998777777755679999999888765543
No 171
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=95.80 E-value=0.053 Score=66.47 Aligned_cols=109 Identities=11% Similarity=0.134 Sum_probs=70.4
Q ss_pred CCCcEEEEEcCCCCCch----hH---HHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhC
Q 000272 214 GLDTTLLLVPGTAEGSI----EK---RIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKAR 286 (1744)
Q Consensus 214 g~~P~VVLLHGltGGS~----~s---YIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~Lrkry 286 (1744)
..+|+||.+||+ |-. .. ++..+. ++.. ...++++||.-..... ....|. ....++.+..+++.+..
T Consensus 120 k~DpVlIYlHGG--GY~l~~~p~qi~~L~~i~-~~l~-~~SILvLDYsLt~~~~--~~~~yP-tQL~qlv~~Y~~Lv~~~ 192 (374)
T PF10340_consen 120 KSDPVLIYLHGG--GYFLGTTPSQIEFLLNIY-KLLP-EVSILVLDYSLTSSDE--HGHKYP-TQLRQLVATYDYLVESE 192 (374)
T ss_pred CCCcEEEEEcCC--eeEecCCHHHHHHHHHHH-HHcC-CCeEEEEecccccccc--CCCcCc-hHHHHHHHHHHHHHhcc
Confidence 347999999994 321 11 122322 3333 5689999996443000 011111 23568888888998666
Q ss_pred CCCcEEEEEecHHHHHHHHHHHHhCC---CCCceEEEEecCCCChh
Q 000272 287 PWTTLMSVGWGYGANMLTKYLAEVGE---RTPLTAVTCIDNPFDLE 329 (1744)
Q Consensus 287 P~spIvLVGhSMGG~IaL~YLae~ge---~s~L~AaVlISpP~Dl~ 329 (1744)
+...|+++|-|.||++++.++..... ...-+++++|||..++.
T Consensus 193 G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 193 GNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred CCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 78899999999999999887755322 12357899998877775
No 172
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=95.68 E-value=0.074 Score=57.27 Aligned_cols=83 Identities=17% Similarity=0.129 Sum_probs=52.9
Q ss_pred HHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHH-HHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCC
Q 000272 234 IRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDD-ICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGE 312 (1744)
Q Consensus 234 Ir~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdD-L~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge 312 (1744)
+..++..+. ..+.|++++.+|++.+.... ...++ ....++.+....+..++.++||||||.++...+.....
T Consensus 15 ~~~~~~~l~-~~~~v~~~~~~g~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~ 87 (212)
T smart00824 15 YARLAAALR-GRRDVSALPLPGFGPGEPLP------ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEA 87 (212)
T ss_pred HHHHHHhcC-CCccEEEecCCCCCCCCCCC------CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHh
Confidence 445565554 46899999999998653211 11222 22344455555667789999999999999887776432
Q ss_pred C-CCceEEEEec
Q 000272 313 R-TPLTAVTCID 323 (1744)
Q Consensus 313 ~-s~L~AaVlIS 323 (1744)
. ..+.+++++.
T Consensus 88 ~~~~~~~l~~~~ 99 (212)
T smart00824 88 RGIPPAAVVLLD 99 (212)
T ss_pred CCCCCcEEEEEc
Confidence 1 2466666554
No 173
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.45 E-value=0.13 Score=59.89 Aligned_cols=59 Identities=10% Similarity=0.032 Sum_probs=43.6
Q ss_pred EEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHHHhh
Q 000272 416 LFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVELG 478 (1744)
Q Consensus 416 LIIhG-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~~~ 478 (1744)
.++.| +|..+|....+ .+.+..|++++...++||...|.. .... +-|+|.+-|++.+++
T Consensus 310 ivv~A~~D~Yipr~gv~-~lQ~~WPg~eVr~~egGHVsayl~--k~dl-fRR~I~d~L~R~~ke 369 (371)
T KOG1551|consen 310 IVVQAKEDAYIPRTGVR-SLQEIWPGCEVRYLEGGHVSAYLF--KQDL-FRRAIVDGLDRLDKE 369 (371)
T ss_pred EEEEecCCccccccCcH-HHHHhCCCCEEEEeecCceeeeeh--hchH-HHHHHHHHHHhhhhc
Confidence 34456 88899886554 455789999999999888777775 2344 478999999987743
No 174
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.43 E-value=0.14 Score=58.14 Aligned_cols=115 Identities=14% Similarity=0.201 Sum_probs=72.8
Q ss_pred CcEEEEEcCCCCCchh-HHHHH--------------HHHHHHhCCcEEEEEcCCCCCCC--CCCCCCCCCcCcHHHHHHH
Q 000272 216 DTTLLLVPGTAEGSIE-KRIRL--------------FVCEALRRGFFPVVMNPRGCGGS--PLTTSRLFTAADSDDICTA 278 (1744)
Q Consensus 216 ~P~VVLLHGltGGS~~-sYIr~--------------La~~La~~GYrVVVfD~RGhGgS--pltsprly~ag~tdDL~aa 278 (1744)
...+|++||. |--.. .|.|+ ++.++.+.||.|+++|.--+-+- ....|..|.-...+-...+
T Consensus 101 ~kLlVLIHGS-GvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yv 179 (297)
T KOG3967|consen 101 QKLLVLIHGS-GVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYV 179 (297)
T ss_pred cceEEEEecC-ceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHH
Confidence 4579999994 32211 13332 45678889999999998533221 1223333333233444444
Q ss_pred HHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhh
Q 000272 279 IQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEA 331 (1744)
Q Consensus 279 Id~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es 331 (1744)
-.++-.......+++|.||+||...+..+-+++....+.++++-.+++....+
T Consensus 180 w~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~p~a 232 (297)
T KOG3967|consen 180 WKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGSPQA 232 (297)
T ss_pred HHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccCchh
Confidence 44443322345799999999999999999999988778887777666554443
No 175
>PLN02606 palmitoyl-protein thioesterase
Probab=95.16 E-value=0.78 Score=55.15 Aligned_cols=109 Identities=11% Similarity=0.088 Sum_probs=63.2
Q ss_pred CcEEEEEcCCCCCchhHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHh--hCCCCcEE
Q 000272 216 DTTLLLVPGTAEGSIEKRIRLFVCEALR-RGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGK--ARPWTTLM 292 (1744)
Q Consensus 216 ~P~VVLLHGltGGS~~sYIr~La~~La~-~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~Lrk--ryP~spIv 292 (1744)
..|||+.||+.......-+..+.+.+.. .|+-+..+- .|-+. ...|.....+.+..+.+.++. ... .-+.
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~-----~~s~~~~~~~Qv~~vce~l~~~~~L~-~G~n 98 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGV-----QDSLFMPLRQQASIACEKIKQMKELS-EGYN 98 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCc-----ccccccCHHHHHHHHHHHHhcchhhc-CceE
Confidence 3579999998422222356677766642 355433332 23221 011211112334444444433 112 2489
Q ss_pred EEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhh
Q 000272 293 SVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEA 331 (1744)
Q Consensus 293 LVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es 331 (1744)
++|||-||.++=.|+.+++...++...|.+++|.....+
T Consensus 99 aIGfSQGglflRa~ierc~~~p~V~nlISlggph~Gv~g 137 (306)
T PLN02606 99 IVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHAGVAA 137 (306)
T ss_pred EEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcCCccc
Confidence 999999999888888777653579999999988765443
No 176
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.00 E-value=0.11 Score=62.88 Aligned_cols=93 Identities=17% Similarity=0.135 Sum_probs=72.4
Q ss_pred CcEEEEEcCCCCCchhHHHHHHHHHHHhC---C------cEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhC
Q 000272 216 DTTLLLVPGTAEGSIEKRIRLFVCEALRR---G------FFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKAR 286 (1744)
Q Consensus 216 ~P~VVLLHGltGGS~~sYIr~La~~La~~---G------YrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~Lrkry 286 (1744)
-.+++++|||+|+-.+.| .++..|... | |.|+|+..+|+|-|...+...+++ ..+..++.-+.-|.
T Consensus 152 v~PlLl~HGwPGsv~EFy--kfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~---~a~ArvmrkLMlRL 226 (469)
T KOG2565|consen 152 VKPLLLLHGWPGSVREFY--KFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNA---AATARVMRKLMLRL 226 (469)
T ss_pred ccceEEecCCCchHHHHH--hhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCccH---HHHHHHHHHHHHHh
Confidence 457999999976433333 455555543 3 889999999999998877776654 34667777777788
Q ss_pred CCCcEEEEEecHHHHHHHHHHHHhCCC
Q 000272 287 PWTTLMSVGWGYGANMLTKYLAEVGER 313 (1744)
Q Consensus 287 P~spIvLVGhSMGG~IaL~YLae~ge~ 313 (1744)
+..++++-|--+|..|..+.+.-+|++
T Consensus 227 g~nkffiqGgDwGSiI~snlasLyPen 253 (469)
T KOG2565|consen 227 GYNKFFIQGGDWGSIIGSNLASLYPEN 253 (469)
T ss_pred CcceeEeecCchHHHHHHHHHhhcchh
Confidence 888999999999999999999999874
No 177
>PLN02633 palmitoyl protein thioesterase family protein
Probab=94.97 E-value=1.1 Score=54.07 Aligned_cols=108 Identities=9% Similarity=0.056 Sum_probs=64.2
Q ss_pred CcEEEEEcCCCCCchh-HHHHHHHHHHHhC-CcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHh--hCCCCcE
Q 000272 216 DTTLLLVPGTAEGSIE-KRIRLFVCEALRR-GFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGK--ARPWTTL 291 (1744)
Q Consensus 216 ~P~VVLLHGltGGS~~-sYIr~La~~La~~-GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~Lrk--ryP~spI 291 (1744)
..|+|+.||+ |.+.. .-+..+.+.+... |..+.++-. |.+ ....|.....+.+..+.+.++. ... .-+
T Consensus 25 ~~P~ViwHG~-GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~---~~~s~~~~~~~Qve~vce~l~~~~~l~-~G~ 96 (314)
T PLN02633 25 SVPFIMLHGI-GTQCSDATNANFTQLLTNLSGSPGFCLEI---GNG---VGDSWLMPLTQQAEIACEKVKQMKELS-QGY 96 (314)
T ss_pred CCCeEEecCC-CcccCCchHHHHHHHHHhCCCCceEEEEE---CCC---ccccceeCHHHHHHHHHHHHhhchhhh-CcE
Confidence 3579999998 44433 3566666666442 555554432 222 1112222223334444444432 122 248
Q ss_pred EEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhh
Q 000272 292 MSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEA 331 (1744)
Q Consensus 292 vLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es 331 (1744)
.++|||-||.++=.|+.++++..++...|.+++|......
T Consensus 97 naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~Gv~g 136 (314)
T PLN02633 97 NIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHAGISS 136 (314)
T ss_pred EEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCCCeeC
Confidence 9999999999888788777653579999999988765543
No 178
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=94.90 E-value=0.87 Score=52.45 Aligned_cols=64 Identities=11% Similarity=0.025 Sum_probs=42.9
Q ss_pred cCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHHHhh
Q 000272 408 VGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVELG 478 (1744)
Q Consensus 408 L~~IkVPVLIIhG-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~~~ 478 (1744)
...|++|.|-|.| .|.++|..... .++...++.. ++...|||..-.. .. +.+.|.+||+.....
T Consensus 159 ~~~i~~PSLHi~G~~D~iv~~~~s~-~L~~~~~~a~-vl~HpggH~VP~~----~~-~~~~i~~fi~~~~~~ 223 (230)
T KOG2551|consen 159 KRPLSTPSLHIFGETDTIVPSERSE-QLAESFKDAT-VLEHPGGHIVPNK----AK-YKEKIADFIQSFLQE 223 (230)
T ss_pred ccCCCCCeeEEecccceeecchHHH-HHHHhcCCCe-EEecCCCccCCCc----hH-HHHHHHHHHHHHHHh
Confidence 3468999999999 89999876443 3466777774 4444455533332 22 457899999876544
No 179
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=94.73 E-value=0.082 Score=56.37 Aligned_cols=54 Identities=13% Similarity=0.075 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCC--CCceEEEEecCCC
Q 000272 273 DDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGER--TPLTAVTCIDNPF 326 (1744)
Q Consensus 273 dDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~--s~L~AaVlISpP~ 326 (1744)
..+...++....++|..+++++||||||.++...+...... ..+..++++++|-
T Consensus 12 ~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 12 NLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 45666666666668999999999999999999888776542 2456677776664
No 180
>KOG3101 consensus Esterase D [General function prediction only]
Probab=94.64 E-value=0.092 Score=59.46 Aligned_cols=115 Identities=16% Similarity=0.129 Sum_probs=61.1
Q ss_pred CCCcEEEEEcCCCCCchhHHHH-HH-HHHHHhCCcEEEEEcC--CCCCCCCCC-------CCCCCCcCc---HHHHHHHH
Q 000272 214 GLDTTLLLVPGTAEGSIEKRIR-LF-VCEALRRGFFPVVMNP--RGCGGSPLT-------TSRLFTAAD---SDDICTAI 279 (1744)
Q Consensus 214 g~~P~VVLLHGltGGS~~sYIr-~L-a~~La~~GYrVVVfD~--RGhGgSplt-------sprly~ag~---tdDL~aaI 279 (1744)
..-|++.+|.|++. ..+.++. .. -+.+.++|+.||.+|- ||+--..-. ...+|--+. +.--..+-
T Consensus 42 k~~P~lf~LSGLTC-T~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMY 120 (283)
T KOG3101|consen 42 KRCPVLFYLSGLTC-THENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMY 120 (283)
T ss_pred CcCceEEEecCCcc-cchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHH
Confidence 34688999999974 5555533 22 3456678999999984 776321100 011111010 01111233
Q ss_pred HHHHhhC---------C--CCcEEEEEecHHHHHHHHHHHHhCCC-CCceEEEEecCCCChh
Q 000272 280 QFIGKAR---------P--WTTLMSVGWGYGANMLTKYLAEVGER-TPLTAVTCIDNPFDLE 329 (1744)
Q Consensus 280 d~Lrkry---------P--~spIvLVGhSMGG~IaL~YLae~ge~-s~L~AaVlISpP~Dl~ 329 (1744)
+|+.+.. | ..++.+.||||||.=++....+.+.. ..+.|..-||+|.+..
T Consensus 121 dYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cp 182 (283)
T KOG3101|consen 121 DYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCP 182 (283)
T ss_pred HHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCc
Confidence 3333221 1 23678999999997655444343322 2366666677776654
No 181
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=94.52 E-value=0.093 Score=65.82 Aligned_cols=128 Identities=16% Similarity=0.102 Sum_probs=78.5
Q ss_pred CCcEEEEEecCCCccccccCCCcEEEEEcCCC--CCchhHHHHHHHHHHHhCC-cEEEEEcCC----CCCC-CCCCCCCC
Q 000272 195 DGGVISLDWPSNLDLHEEHGLDTTLLLVPGTA--EGSIEKRIRLFVCEALRRG-FFPVVMNPR----GCGG-SPLTTSRL 266 (1744)
Q Consensus 195 DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGlt--GGS~~sYIr~La~~La~~G-YrVVVfD~R----GhGg-Spltsprl 266 (1744)
+...+.|..+.|. ......|++|+|||+. +|+....... -..|+++| +-||.+||| |+-. +...+.+.
T Consensus 76 sEDCL~LNIwaP~---~~a~~~PVmV~IHGG~y~~Gs~s~~~yd-gs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~ 151 (491)
T COG2272 76 SEDCLYLNIWAPE---VPAEKLPVMVYIHGGGYIMGSGSEPLYD-GSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDA 151 (491)
T ss_pred cccceeEEeeccC---CCCCCCcEEEEEeccccccCCCcccccC-hHHHHhcCCEEEEEeCcccccceeeehhhcccccc
Confidence 3345666644332 1223469999999851 2233322212 23567777 999999999 3321 12222222
Q ss_pred CCc-CcHHHHHHHHHHHHhh---CC--CCcEEEEEecHHHHHHHHHHHHhCCC-CCceEEEEecCCCC
Q 000272 267 FTA-ADSDDICTAIQFIGKA---RP--WTTLMSVGWGYGANMLTKYLAEVGER-TPLTAVTCIDNPFD 327 (1744)
Q Consensus 267 y~a-g~tdDL~aaId~Lrkr---yP--~spIvLVGhSMGG~IaL~YLae~ge~-s~L~AaVlISpP~D 327 (1744)
++. .-..|...+|+|+++. ++ ...|.++|+|.||+.++..++- |.. -.+..+|+.|++..
T Consensus 152 ~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 152 FASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred ccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 221 1358999999999875 33 2479999999999999888865 432 23666777776664
No 182
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=93.95 E-value=0.13 Score=53.39 Aligned_cols=53 Identities=15% Similarity=0.220 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCC----CceEEEEecCC
Q 000272 273 DDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERT----PLTAVTCIDNP 325 (1744)
Q Consensus 273 dDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s----~L~AaVlISpP 325 (1744)
+.+...|..+.++++..++++.||||||.++..++....... ....+++.++|
T Consensus 48 ~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P 104 (140)
T PF01764_consen 48 DQILDALKELVEKYPDYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAP 104 (140)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S
T ss_pred HHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCc
Confidence 456666666777888889999999999999988776643211 23345555554
No 183
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=93.83 E-value=0.067 Score=68.44 Aligned_cols=94 Identities=13% Similarity=0.067 Sum_probs=62.4
Q ss_pred HHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCC--CcCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhC
Q 000272 234 IRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLF--TAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVG 311 (1744)
Q Consensus 234 Ir~La~~La~~GYrVVVfD~RGhGgSpltsprly--~ag~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~g 311 (1744)
+..+++.|...||. -.|.+|...--...+... ...+...|...|+.+.+.....+++++||||||.+++.++....
T Consensus 158 w~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~ 235 (642)
T PLN02517 158 WAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVE 235 (642)
T ss_pred HHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhcc
Confidence 47889999999996 234433321111111111 12345788999998877766789999999999999988776321
Q ss_pred ----------C---CCCceEEEEecCCCChh
Q 000272 312 ----------E---RTPLTAVTCIDNPFDLE 329 (1744)
Q Consensus 312 ----------e---~s~L~AaVlISpP~Dl~ 329 (1744)
. +..|.+.|.|++||...
T Consensus 236 ~~~~~gG~gG~~W~dKyI~s~I~Iagp~lGs 266 (642)
T PLN02517 236 APAPMGGGGGPGWCAKHIKAVMNIGGPFLGV 266 (642)
T ss_pred ccccccCCcchHHHHHHHHHheecccccCCc
Confidence 0 12488999999988653
No 184
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=93.76 E-value=0.61 Score=57.14 Aligned_cols=138 Identities=14% Similarity=0.102 Sum_probs=77.9
Q ss_pred EEEEEcC--CCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHH------------------HHHhCCcE
Q 000272 188 RVCVNTE--DGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVC------------------EALRRGFF 247 (1744)
Q Consensus 188 Re~L~t~--DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~------------------~La~~GYr 247 (1744)
.-+++.. .+..+.+ |+...+ ....++|+||.+.|++|+|.-. -.+.. +-..+-..
T Consensus 13 sGyl~~~~~~~~~lfy-w~~~s~--~~~~~~Pl~~wlnGGPG~SS~~--g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an 87 (415)
T PF00450_consen 13 SGYLPVNDNENAHLFY-WFFESR--NDPEDDPLILWLNGGPGCSSMW--GLFGENGPFRINPDGPYTLEDNPYSWNKFAN 87 (415)
T ss_dssp EEEEEECTTTTEEEEE-EEEE-S--SGGCSS-EEEEEE-TTTB-THH--HHHCTTSSEEEETTSTSEEEE-TT-GGGTSE
T ss_pred EEEEecCCCCCcEEEE-EEEEeC--CCCCCccEEEEecCCceecccc--ccccccCceEEeecccccccccccccccccc
Confidence 3456665 5566665 443322 2345689999999988755421 11110 00112267
Q ss_pred EEEEcC-CCCCCCCCCCCCCCCc---CcHHHHHHHHHHHHhhCC---CCcEEEEEecHHHHHHHHHH---HHhCC-----
Q 000272 248 PVVMNP-RGCGGSPLTTSRLFTA---ADSDDICTAIQFIGKARP---WTTLMSVGWGYGANMLTKYL---AEVGE----- 312 (1744)
Q Consensus 248 VVVfD~-RGhGgSpltsprly~a---g~tdDL~aaId~LrkryP---~spIvLVGhSMGG~IaL~YL---ae~ge----- 312 (1744)
++-+|+ -|.|-|....+..+.. ...+|+.++|...-.++| ..+++++|.|+||..+-.++ .+...
T Consensus 88 ~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~ 167 (415)
T PF00450_consen 88 LLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQP 167 (415)
T ss_dssp EEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--ST
T ss_pred eEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccc
Confidence 888994 4999885544443222 234677777776666676 45999999999998764444 33332
Q ss_pred CCCceEEEEecCCCChhh
Q 000272 313 RTPLTAVTCIDNPFDLEE 330 (1744)
Q Consensus 313 ~s~L~AaVlISpP~Dl~e 330 (1744)
...++++++.++..+...
T Consensus 168 ~inLkGi~IGng~~dp~~ 185 (415)
T PF00450_consen 168 KINLKGIAIGNGWIDPRI 185 (415)
T ss_dssp TSEEEEEEEESE-SBHHH
T ss_pred ccccccceecCccccccc
Confidence 345888887777666653
No 185
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=93.63 E-value=0.56 Score=53.43 Aligned_cols=56 Identities=13% Similarity=0.048 Sum_probs=35.9
Q ss_pred CccEEEEEe-CCCCCCCCCh---HHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHH
Q 000272 412 KIPVLFIQN-DAGAVPPFSI---PRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSA 474 (1744)
Q Consensus 412 kVPVLIIhG-DDp~VP~~ai---p~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~a 474 (1744)
..|++..|| +|++||..-. ...+......+++..+++-+|..... + -..+..|+..
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~~-----e--~~~~~~~~~~ 203 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSPQ-----E--LDDLKSWIKT 203 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccccHH-----H--HHHHHHHHHH
Confidence 579999999 9999996422 11222333338888899877754442 1 2566777765
No 186
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=93.28 E-value=0.17 Score=57.61 Aligned_cols=53 Identities=13% Similarity=0.194 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCC--CCceEEEEecCC
Q 000272 273 DDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGER--TPLTAVTCIDNP 325 (1744)
Q Consensus 273 dDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~--s~L~AaVlISpP 325 (1744)
.++...+..+.+++|..++++.||||||.++..++...... .....+++.++|
T Consensus 112 ~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P 166 (229)
T cd00519 112 NQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQP 166 (229)
T ss_pred HHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCC
Confidence 56666667677778999999999999999998877764321 122335555554
No 187
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=92.94 E-value=0.064 Score=66.78 Aligned_cols=93 Identities=11% Similarity=0.019 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHhCCcE------EEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHH
Q 000272 232 KRIRLFVCEALRRGFF------PVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTK 305 (1744)
Q Consensus 232 sYIr~La~~La~~GYr------VVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~ 305 (1744)
.|+..+++.+..-||. -+.||+|= |...+.+. ..+...+...|+...+.++..++++|+|||||.+.+.
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s~~~~e~r--d~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~ly 198 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRL---SYHNSEER--DQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLY 198 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhh---ccCChhHH--HHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHH
Confidence 3677888888888887 66788882 22111110 1234789999999999888899999999999999999
Q ss_pred HHHHhCCC------CCceEEEEecCCCChh
Q 000272 306 YLAEVGER------TPLTAVTCIDNPFDLE 329 (1744)
Q Consensus 306 YLae~ge~------s~L~AaVlISpP~Dl~ 329 (1744)
++..+... ..+++.+.+++||-..
T Consensus 199 Fl~w~~~~~~~W~~k~I~sfvnig~p~lG~ 228 (473)
T KOG2369|consen 199 FLKWVEAEGPAWCDKYIKSFVNIGAPWLGS 228 (473)
T ss_pred HHhcccccchhHHHHHHHHHHccCchhcCC
Confidence 98877652 2377777777777553
No 188
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=91.73 E-value=2.5 Score=50.53 Aligned_cols=40 Identities=15% Similarity=0.385 Sum_probs=28.0
Q ss_pred CcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChh
Q 000272 289 TTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLE 329 (1744)
Q Consensus 289 spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~ 329 (1744)
.-+.++|||-||.++=.|+-+++. .++...|.+++|....
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~-~~V~nlISlggph~Gv 119 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCND-PPVHNLISLGGPHMGV 119 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TS-S-EEEEEEES--TT-B
T ss_pred cceeeeeeccccHHHHHHHHHCCC-CCceeEEEecCccccc
Confidence 358999999999888777777654 5799999999887554
No 189
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=91.24 E-value=3.1 Score=49.28 Aligned_cols=43 Identities=14% Similarity=0.074 Sum_probs=33.0
Q ss_pred HHHhhCC--CCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCC
Q 000272 281 FIGKARP--WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNP 325 (1744)
Q Consensus 281 ~LrkryP--~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP 325 (1744)
+|.++|+ ..+-.++||||||.+++..+..+|+ .+...+++|+.
T Consensus 127 ~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~--~F~~y~~~SPS 171 (264)
T COG2819 127 FIEARYRTNSERTAIIGHSLGGLFVLFALLTYPD--CFGRYGLISPS 171 (264)
T ss_pred HHhcccccCcccceeeeecchhHHHHHHHhcCcc--hhceeeeecch
Confidence 5666664 3468999999999999999988765 46667777664
No 190
>PF10086 DUF2324: Putative membrane peptidase family (DUF2324); InterPro: IPR011397 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. However, they are predicted to be integral membrane proteins (with several transmembrane segments).
Probab=90.77 E-value=2.8 Score=48.63 Aligned_cols=42 Identities=14% Similarity=0.056 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHhhcCCchhhHHHHHHHhHhcC
Q 000272 1600 GIVTATVVVLVEELLFRSWLPEEIAADLDYHRGIIISGLAFALSQR 1645 (1744)
Q Consensus 1600 ~lllallv~l~EELLFRG~L~~~L~~~~g~~~AIIISSLLFALlHl 1645 (1744)
++..++.+|+.||. .|=+.++.+.++...+.- .++.||+-|.
T Consensus 64 ~ly~~l~AGiFEE~-gR~i~~k~l~kk~~~~~~---~al~~GlGhG 105 (223)
T PF10086_consen 64 ALYGGLMAGIFEET-GRYIGFKYLLKKRRDWSD---DALAYGLGHG 105 (223)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHcccchhh---HHHHHHcchH
Confidence 56667788999994 344444444444333322 3445555554
No 191
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=90.64 E-value=1.4 Score=52.04 Aligned_cols=106 Identities=10% Similarity=0.083 Sum_probs=65.3
Q ss_pred cEEEEEcCCCCCchhHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhC-CCCcEEEE
Q 000272 217 TTLLLVPGTAEGSIEKRIRLFVCEALR-RGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKAR-PWTTLMSV 294 (1744)
Q Consensus 217 P~VVLLHGltGGS~~sYIr~La~~La~-~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~Lrkry-P~spIvLV 294 (1744)
-++|++||+..++...-+.++.+.+.+ -|..|++++. |-| ..+.+..-..+.+..+-+.+++.. -..-+.++
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g-----~~~s~l~pl~~Qv~~~ce~v~~m~~lsqGyniv 97 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG-----IKDSSLMPLWEQVDVACEKVKQMPELSQGYNIV 97 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC-----cchhhhccHHHHHHHHHHHHhcchhccCceEEE
Confidence 579999998443333336677666665 3777777776 222 011122222344444445554221 02357999
Q ss_pred EecHHHHHHHHHHHHhCCCCCceEEEEecCCCChh
Q 000272 295 GWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLE 329 (1744)
Q Consensus 295 GhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~ 329 (1744)
|+|-||.+ ++.+++..+..++...|.++.|.-..
T Consensus 98 g~SQGglv-~Raliq~cd~ppV~n~ISL~gPhaG~ 131 (296)
T KOG2541|consen 98 GYSQGGLV-ARALIQFCDNPPVKNFISLGGPHAGI 131 (296)
T ss_pred EEccccHH-HHHHHHhCCCCCcceeEeccCCcCCc
Confidence 99999965 56666666667899999998876544
No 192
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=90.48 E-value=3.1 Score=46.68 Aligned_cols=52 Identities=17% Similarity=0.304 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHhhC-CCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCC
Q 000272 272 SDDICTAIQFIGKAR-PWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNP 325 (1744)
Q Consensus 272 tdDL~aaId~Lrkry-P~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP 325 (1744)
..+|..+++-|+..+ |..++.++|||+|+.++...+...+ ..+..++.+++|
T Consensus 91 a~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~--~~vddvv~~GSP 143 (177)
T PF06259_consen 91 APRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGG--LRVDDVVLVGSP 143 (177)
T ss_pred HHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCC--CCcccEEEECCC
Confidence 368888888888777 7789999999999988877776522 357778887665
No 193
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=89.85 E-value=0.68 Score=43.58 Aligned_cols=46 Identities=22% Similarity=0.228 Sum_probs=25.6
Q ss_pred cceEEEEEEcCCCcEEEEEecCCCc-cccccCCCcEEEEEcCCCCCc
Q 000272 184 LEYQRVCVNTEDGGVISLDWPSNLD-LHEEHGLDTTLLLVPGTAEGS 229 (1744)
Q Consensus 184 V~YeRe~L~t~DGG~IaLDW~~p~~-~~~~~g~~P~VVLLHGltGGS 229 (1744)
.+.+...++++||-.+.+....+.. .......+|+|++.||+.++|
T Consensus 10 Y~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss 56 (63)
T PF04083_consen 10 YPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSS 56 (63)
T ss_dssp ---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--G
T ss_pred CCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccCh
Confidence 4557888999999999987655432 222345689999999997544
No 194
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=89.82 E-value=0.84 Score=56.40 Aligned_cols=109 Identities=16% Similarity=0.177 Sum_probs=76.0
Q ss_pred cEEEEEcCCCCCchhHH------HHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCC----------cCcHHHHHHHHH
Q 000272 217 TTLLLVPGTAEGSIEKR------IRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFT----------AADSDDICTAIQ 280 (1744)
Q Consensus 217 P~VVLLHGltGGS~~sY------Ir~La~~La~~GYrVVVfD~RGhGgSpltsprly~----------ag~tdDL~aaId 280 (1744)
.+|++--|- +|+.+.+ ++.++ .+.+--+|...||=+|.|..-..+.|. .....|+...|.
T Consensus 81 gPIffYtGN-EGdie~Fa~ntGFm~D~A---p~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~ 156 (492)
T KOG2183|consen 81 GPIFFYTGN-EGDIEWFANNTGFMWDLA---PELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLT 156 (492)
T ss_pred CceEEEeCC-cccHHHHHhccchHHhhh---HhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHH
Confidence 567777784 6666554 44444 445677999999999998433222111 123479999999
Q ss_pred HHHhhCC--CCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChhhh
Q 000272 281 FIGKARP--WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEA 331 (1744)
Q Consensus 281 ~LrkryP--~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es 331 (1744)
++++... ..|++++|-|+||+++..+=..+|. .+.|+++-|+|.-..+.
T Consensus 157 ~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPH--iv~GAlAaSAPvl~f~d 207 (492)
T KOG2183|consen 157 FLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPH--IVLGALAASAPVLYFED 207 (492)
T ss_pred HHhhccccccCcEEEecCchhhHHHHHHHhcChh--hhhhhhhccCceEeecC
Confidence 9987643 4699999999999988877777765 57777777777654443
No 195
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=89.50 E-value=0.67 Score=47.11 Aligned_cols=58 Identities=21% Similarity=0.261 Sum_probs=45.0
Q ss_pred CccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHH
Q 000272 412 KIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLS 473 (1744)
Q Consensus 412 kVPVLIIhG-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~ 473 (1744)
..|+|+|++ .|+..|.... ..+++..++.+++..++.||+.+... ..-+.+.+.+||.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a-~~~~~~l~~s~lvt~~g~gHg~~~~~---s~C~~~~v~~yl~ 92 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGA-RAMAARLPGSRLVTVDGAGHGVYAGG---SPCVDKAVDDYLL 92 (103)
T ss_pred CCCEEEEecCcCCCCcHHHH-HHHHHHCCCceEEEEeccCcceecCC---ChHHHHHHHHHHH
Confidence 589999999 8999987644 34567889899999999899888521 2335678888885
No 196
>COG3150 Predicted esterase [General function prediction only]
Probab=89.35 E-value=1.4 Score=48.90 Aligned_cols=80 Identities=15% Similarity=0.084 Sum_probs=43.6
Q ss_pred EEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEEEEecH
Q 000272 219 LLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGWGY 298 (1744)
Q Consensus 219 VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIvLVGhSM 298 (1744)
||.+|||. +|-.+.-..+...+... |.|-++-+- |..-+ +..++.+.|+.+-..+......+||.|+
T Consensus 2 ilYlHGFn-SSP~shka~l~~q~~~~-------~~~~i~y~~---p~l~h--~p~~a~~ele~~i~~~~~~~p~ivGssL 68 (191)
T COG3150 2 ILYLHGFN-SSPGSHKAVLLLQFIDE-------DVRDIEYST---PHLPH--DPQQALKELEKAVQELGDESPLIVGSSL 68 (191)
T ss_pred eEEEecCC-CCcccHHHHHHHHHHhc-------cccceeeec---CCCCC--CHHHHHHHHHHHHHHcCCCCceEEeecc
Confidence 78999994 34444322222233222 333333332 11111 2334444444444444444579999999
Q ss_pred HHHHHHHHHHHhC
Q 000272 299 GANMLTKYLAEVG 311 (1744)
Q Consensus 299 GG~IaL~YLae~g 311 (1744)
||..+.+...+++
T Consensus 69 GGY~At~l~~~~G 81 (191)
T COG3150 69 GGYYATWLGFLCG 81 (191)
T ss_pred hHHHHHHHHHHhC
Confidence 9999998887765
No 197
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=89.22 E-value=0.52 Score=52.53 Aligned_cols=56 Identities=20% Similarity=0.271 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCC----CCCceEEEEecCCCC
Q 000272 272 SDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGE----RTPLTAVTCIDNPFD 327 (1744)
Q Consensus 272 tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge----~s~L~AaVlISpP~D 327 (1744)
..++...|+....+.|+.+++++|||.|+.++..++...+- ..+|.++++++.|..
T Consensus 64 ~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 64 VANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 46788888877888999999999999999999999987111 125889999988865
No 198
>PLN02454 triacylglycerol lipase
Probab=88.39 E-value=0.88 Score=56.80 Aligned_cols=39 Identities=13% Similarity=0.141 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHhhCCCCc--EEEEEecHHHHHHHHHHHHh
Q 000272 272 SDDICTAIQFIGKARPWTT--LMSVGWGYGANMLTKYLAEV 310 (1744)
Q Consensus 272 tdDL~aaId~LrkryP~sp--IvLVGhSMGG~IaL~YLae~ 310 (1744)
.+++...|..+.++||..+ |++.||||||.+++.++...
T Consensus 209 r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di 249 (414)
T PLN02454 209 RSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDI 249 (414)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHH
Confidence 3677788888888898765 99999999999999988653
No 199
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=88.22 E-value=0.91 Score=56.03 Aligned_cols=82 Identities=18% Similarity=0.239 Sum_probs=59.1
Q ss_pred CcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEEEE
Q 000272 216 DTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVG 295 (1744)
Q Consensus 216 ~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIvLVG 295 (1744)
+..-||..|= |.....-+..+.+|+++|+.||.+|---+=-+.. +| ....+|+..+|++-..+++..++.++|
T Consensus 260 d~~av~~SGD--GGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~r-tP----e~~a~Dl~r~i~~y~~~w~~~~~~liG 332 (456)
T COG3946 260 DTVAVFYSGD--GGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSER-TP----EQIAADLSRLIRFYARRWGAKRVLLIG 332 (456)
T ss_pred ceEEEEEecC--CchhhhhHHHHHHHHHCCCceeeeehhhhhhccC-CH----HHHHHHHHHHHHHHHHhhCcceEEEEe
Confidence 3455666662 3344456778899999999999999633222221 11 123589999999999999989999999
Q ss_pred ecHHHHHHH
Q 000272 296 WGYGANMLT 304 (1744)
Q Consensus 296 hSMGG~IaL 304 (1744)
+|+|+-++-
T Consensus 333 ySfGADvlP 341 (456)
T COG3946 333 YSFGADVLP 341 (456)
T ss_pred ecccchhhH
Confidence 999997653
No 200
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=88.11 E-value=2.9 Score=52.10 Aligned_cols=39 Identities=18% Similarity=0.074 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHhhCC--C--CcEEEEEecHHHHHHHHHHHHhC
Q 000272 273 DDICTAIQFIGKARP--W--TTLMSVGWGYGANMLTKYLAEVG 311 (1744)
Q Consensus 273 dDL~aaId~LrkryP--~--spIvLVGhSMGG~IaL~YLae~g 311 (1744)
-|+..+|.++.+++| . -|++++|+|.||.++...+.-.|
T Consensus 164 iD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP 206 (403)
T PF11144_consen 164 IDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAP 206 (403)
T ss_pred HHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCc
Confidence 477788888877765 2 48999999999998876665444
No 201
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=87.30 E-value=8.2 Score=48.00 Aligned_cols=70 Identities=16% Similarity=0.099 Sum_probs=48.6
Q ss_pred cCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCC-CeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHHHhh
Q 000272 402 SSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENP-FTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVELG 478 (1744)
Q Consensus 402 aS~~~~L~~IkVPVLIIhG-DDp~VP~~aip~~la~~nP-nv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~~~ 478 (1744)
.+|..+..++++|-++|+| .|++..+.+..... ...| ...|.+.|..+|..... -+...+..|+..+..+
T Consensus 252 vDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~-d~L~G~K~lr~vPN~~H~~~~~------~~~~~l~~f~~~~~~~ 323 (367)
T PF10142_consen 252 VDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYY-DKLPGEKYLRYVPNAGHSLIGS------DVVQSLRAFYNRIQNG 323 (367)
T ss_pred cCHHHHHHhcCccEEEEecCCCceeccCchHHHH-hhCCCCeeEEeCCCCCcccchH------HHHHHHHHHHHHHHcC
Confidence 4555666788999999999 89988777655433 3444 45678889888865552 2456778888776533
No 202
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=87.19 E-value=7.9 Score=44.79 Aligned_cols=78 Identities=15% Similarity=0.307 Sum_probs=48.4
Q ss_pred CcEEEEEcCCCCCchhHHHHHHHHHHHhCCcE-EEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEEE
Q 000272 216 DTTLLLVPGTAEGSIEKRIRLFVCEALRRGFF-PVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSV 294 (1744)
Q Consensus 216 ~P~VVLLHGltGGS~~sYIr~La~~La~~GYr-VVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIvLV 294 (1744)
+..||+.-|| |+....+.++. ...+|. ++++|||-.-- .. | + .. ...+.+|
T Consensus 11 ~~LilfF~GW--g~d~~~f~hL~---~~~~~D~l~~yDYr~l~~---------d~----~-------~-~~--y~~i~lv 62 (213)
T PF04301_consen 11 KELILFFAGW--GMDPSPFSHLI---LPENYDVLICYDYRDLDF---------DF----D-------L-SG--YREIYLV 62 (213)
T ss_pred CeEEEEEecC--CCChHHhhhcc---CCCCccEEEEecCccccc---------cc----c-------c-cc--CceEEEE
Confidence 4678889997 34443333332 234566 57789984421 00 1 1 12 3689999
Q ss_pred EecHHHHHHHHHHHHhCCCCCceEEEEecCC
Q 000272 295 GWGYGANMLTKYLAEVGERTPLTAVTCIDNP 325 (1744)
Q Consensus 295 GhSMGG~IaL~YLae~ge~s~L~AaVlISpP 325 (1744)
+||||-.++.+++... ++..+++|+..
T Consensus 63 AWSmGVw~A~~~l~~~----~~~~aiAINGT 89 (213)
T PF04301_consen 63 AWSMGVWAANRVLQGI----PFKRAIAINGT 89 (213)
T ss_pred EEeHHHHHHHHHhccC----CcceeEEEECC
Confidence 9999999988887543 46667777543
No 203
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=86.81 E-value=1.3 Score=51.35 Aligned_cols=51 Identities=20% Similarity=0.291 Sum_probs=35.6
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCC--CCceEEEEecCC
Q 000272 274 DICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGER--TPLTAVTCIDNP 325 (1744)
Q Consensus 274 DL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~--s~L~AaVlISpP 325 (1744)
...+.++.+.++++. ++++.|||+||++|...++...+. .+|..+.+..+|
T Consensus 70 ~A~~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 70 SALAYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred HHHHHHHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 444455555556765 599999999999998877774432 357777776554
No 204
>COG0627 Predicted esterase [General function prediction only]
Probab=86.30 E-value=1.6 Score=52.99 Aligned_cols=38 Identities=8% Similarity=0.045 Sum_probs=31.2
Q ss_pred cEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChh
Q 000272 290 TLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLE 329 (1744)
Q Consensus 290 pIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~ 329 (1744)
...++||||||.=++.+++.+++ .+..+..+++..+..
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd--~f~~~sS~Sg~~~~s 190 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPD--RFKSASSFSGILSPS 190 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcc--hhceecccccccccc
Confidence 67999999999999999999875 577777777666554
No 205
>PLN00413 triacylglycerol lipase
Probab=85.69 E-value=1.7 Score=55.06 Aligned_cols=36 Identities=17% Similarity=0.230 Sum_probs=30.3
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHH
Q 000272 274 DICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAE 309 (1744)
Q Consensus 274 DL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae 309 (1744)
.+...|..+..++|..++++.||||||++++.+++.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~ 304 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAV 304 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHH
Confidence 566677777778999999999999999999987753
No 206
>PRK12438 hypothetical protein; Provisional
Probab=85.44 E-value=24 Score=48.76 Aligned_cols=13 Identities=8% Similarity=0.215 Sum_probs=8.1
Q ss_pred cchHHHHHHhHHh
Q 000272 1670 SLSVPIGLRTGIM 1682 (1744)
Q Consensus 1670 SLWlpIGLHagWn 1682 (1744)
++-.+.-.|.+..
T Consensus 204 ~~s~~ar~hL~vl 216 (991)
T PRK12438 204 MLTQAARVQLAVF 216 (991)
T ss_pred cCCHHHHHHHHHH
Confidence 4666777785543
No 207
>PLN02162 triacylglycerol lipase
Probab=85.40 E-value=1.8 Score=54.82 Aligned_cols=53 Identities=15% Similarity=0.149 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHH---hCCC---CCceEEEEecCC
Q 000272 273 DDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAE---VGER---TPLTAVTCIDNP 325 (1744)
Q Consensus 273 dDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae---~ge~---s~L~AaVlISpP 325 (1744)
..+...+..+..++|..++++.||||||.+++.+++. .+.. ..+.+++..++|
T Consensus 262 ~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqP 320 (475)
T PLN02162 262 YTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQP 320 (475)
T ss_pred HHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCC
Confidence 4566666666677888899999999999999887653 2221 124456666655
No 208
>PLN02209 serine carboxypeptidase
Probab=85.40 E-value=5.7 Score=50.39 Aligned_cols=137 Identities=13% Similarity=0.052 Sum_probs=76.3
Q ss_pred EEEEcCC--CcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHH-HHHHHHH-------------------HHhCCc
Q 000272 189 VCVNTED--GGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKR-IRLFVCE-------------------ALRRGF 246 (1744)
Q Consensus 189 e~L~t~D--GG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sY-Ir~La~~-------------------La~~GY 246 (1744)
.+++..+ |..+.+ |+.... .....+|+|+.+-|++|+|.... +...... ...+-.
T Consensus 42 Gy~~v~~~~~~~lf~-~f~es~--~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~a 118 (437)
T PLN02209 42 GYIGIGEEENVQFFY-YFIKSD--KNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTA 118 (437)
T ss_pred EEEEecCCCCeEEEE-EEEecC--CCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcC
Confidence 3466644 445554 554322 22345799999999877654211 0000000 011225
Q ss_pred EEEEEc-CCCCCCCCCCCCCCCCc--CcHHHHHHHHHHHHhhCC---CCcEEEEEecHHHHHHHHHHHHhC--C------
Q 000272 247 FPVVMN-PRGCGGSPLTTSRLFTA--ADSDDICTAIQFIGKARP---WTTLMSVGWGYGANMLTKYLAEVG--E------ 312 (1744)
Q Consensus 247 rVVVfD-~RGhGgSpltsprly~a--g~tdDL~aaId~LrkryP---~spIvLVGhSMGG~IaL~YLae~g--e------ 312 (1744)
.++-+| .-|.|-|-...+..+.. ...+|+.++|...-+++| ..+++++|.|+||..+-..+.+-- .
T Consensus 119 nllfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~ 198 (437)
T PLN02209 119 NIIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNP 198 (437)
T ss_pred cEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCC
Confidence 677778 55888774333322211 234667777766556666 358999999999987665554321 1
Q ss_pred CCCceEEEEecCCCCh
Q 000272 313 RTPLTAVTCIDNPFDL 328 (1744)
Q Consensus 313 ~s~L~AaVlISpP~Dl 328 (1744)
...++++++..+..|.
T Consensus 199 ~inl~Gi~igng~td~ 214 (437)
T PLN02209 199 PINLQGYVLGNPITHI 214 (437)
T ss_pred ceeeeeEEecCcccCh
Confidence 2357777766655554
No 209
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=85.03 E-value=1.6 Score=50.17 Aligned_cols=83 Identities=17% Similarity=0.063 Sum_probs=52.9
Q ss_pred CcEEEEEcCCCCCCCCCC-CC----CCCCcCcHHHHHHHHHHHHhhCC-CCcEEEEEecHHHHHHHHHHHHhCC----CC
Q 000272 245 GFFPVVMNPRGCGGSPLT-TS----RLFTAADSDDICTAIQFIGKARP-WTTLMSVGWGYGANMLTKYLAEVGE----RT 314 (1744)
Q Consensus 245 GYrVVVfD~RGhGgSplt-sp----rly~ag~tdDL~aaId~LrkryP-~spIvLVGhSMGG~IaL~YLae~ge----~s 314 (1744)
-.+|+++=||=....... .. +.....-..|+.++.+|-.++++ ..|++++|||-|+.++.+.+.++-+ ..
T Consensus 45 ~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~~~~~pl~~ 124 (207)
T PF11288_consen 45 VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEEIAGDPLRK 124 (207)
T ss_pred CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHHhcCchHHh
Confidence 367788877744321111 00 00111124799999987666665 4599999999999999999988522 23
Q ss_pred CceEEEEecCCCC
Q 000272 315 PLTAVTCIDNPFD 327 (1744)
Q Consensus 315 ~L~AaVlISpP~D 327 (1744)
++.++-+++-+..
T Consensus 125 rLVAAYliG~~v~ 137 (207)
T PF11288_consen 125 RLVAAYLIGYPVT 137 (207)
T ss_pred hhheeeecCcccc
Confidence 5777777765543
No 210
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=84.67 E-value=8.1 Score=49.03 Aligned_cols=135 Identities=15% Similarity=0.044 Sum_probs=73.6
Q ss_pred EEEcCC--CcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhH-HHHHHHHH-------------H------HhCCcE
Q 000272 190 CVNTED--GGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEK-RIRLFVCE-------------A------LRRGFF 247 (1744)
Q Consensus 190 ~L~t~D--GG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~s-YIr~La~~-------------L------a~~GYr 247 (1744)
+++..+ +..+.+ |+.... .....+|+|+.+-|++|+|... .+...... + ..+-..
T Consensus 41 y~~v~~~~~~~lfy-~f~es~--~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~an 117 (433)
T PLN03016 41 YIGIGEDENVQFFY-YFIKSE--NNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMAN 117 (433)
T ss_pred EEEecCCCCeEEEE-EEEecC--CCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCc
Confidence 355533 344544 553321 2234679999999987755421 11111110 0 112256
Q ss_pred EEEEc-CCCCCCCCCCCCCCCCc--CcHHHHHHHHHHHHhhCC---CCcEEEEEecHHHHHHHHHHHHh--CC------C
Q 000272 248 PVVMN-PRGCGGSPLTTSRLFTA--ADSDDICTAIQFIGKARP---WTTLMSVGWGYGANMLTKYLAEV--GE------R 313 (1744)
Q Consensus 248 VVVfD-~RGhGgSpltsprly~a--g~tdDL~aaId~LrkryP---~spIvLVGhSMGG~IaL~YLae~--ge------~ 313 (1744)
++-+| .-|.|-|....+..+.. ...+|+.+++...-+++| ..+++++|.|+||..+-..+.+- .. .
T Consensus 118 llfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~ 197 (433)
T PLN03016 118 IIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPP 197 (433)
T ss_pred EEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCc
Confidence 88888 56888875433322211 123567777765555665 46899999999998766555442 11 2
Q ss_pred CCceEEEEecCCCC
Q 000272 314 TPLTAVTCIDNPFD 327 (1744)
Q Consensus 314 s~L~AaVlISpP~D 327 (1744)
..++|+++-.+..+
T Consensus 198 inLkGi~iGNg~t~ 211 (433)
T PLN03016 198 INLQGYMLGNPVTY 211 (433)
T ss_pred ccceeeEecCCCcC
Confidence 35776665544333
No 211
>COG2339 prsW Membrane proteinase, regulator of anti-sigma factor [Posttranslational modification, protein turnover, chaperones]
Probab=84.37 E-value=55 Score=39.44 Aligned_cols=14 Identities=43% Similarity=0.406 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHH
Q 000272 1601 IVTATVVVLVEELL 1614 (1744)
Q Consensus 1601 lllallv~l~EELL 1614 (1744)
+..++.+|+.||..
T Consensus 108 l~~al~~G~vEE~~ 121 (274)
T COG2339 108 LGSALLAGLVEEPL 121 (274)
T ss_pred HHHHHhhhhhHHHH
Confidence 44567789999964
No 212
>PLN02934 triacylglycerol lipase
Probab=83.81 E-value=2 Score=54.87 Aligned_cols=37 Identities=8% Similarity=0.138 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHH
Q 000272 273 DDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAE 309 (1744)
Q Consensus 273 dDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae 309 (1744)
..+...|+.+.+++|..++++.||||||.+++.+++.
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHHH
Confidence 4577778888888999999999999999999888654
No 213
>PLN02408 phospholipase A1
Probab=83.12 E-value=2.1 Score=52.94 Aligned_cols=38 Identities=16% Similarity=0.124 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHhhCCCC--cEEEEEecHHHHHHHHHHHHh
Q 000272 273 DDICTAIQFIGKARPWT--TLMSVGWGYGANMLTKYLAEV 310 (1744)
Q Consensus 273 dDL~aaId~LrkryP~s--pIvLVGhSMGG~IaL~YLae~ 310 (1744)
+.+.+.|..+.+.||.. +|++.||||||.+++.++...
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 45667777777788864 599999999999999888664
No 214
>PLN02571 triacylglycerol lipase
Probab=82.35 E-value=3 Score=52.32 Aligned_cols=38 Identities=13% Similarity=0.189 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHhhCCCC--cEEEEEecHHHHHHHHHHHHh
Q 000272 273 DDICTAIQFIGKARPWT--TLMSVGWGYGANMLTKYLAEV 310 (1744)
Q Consensus 273 dDL~aaId~LrkryP~s--pIvLVGhSMGG~IaL~YLae~ 310 (1744)
+++...|..+..+|+.. +|++.||||||.+++..+...
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl 247 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVDI 247 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHH
Confidence 55666666666777754 789999999999999888763
No 215
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=81.39 E-value=4.4 Score=52.08 Aligned_cols=108 Identities=15% Similarity=0.067 Sum_probs=62.8
Q ss_pred CcEEEEEecCCCccccccCCCcEEEEEcCCCC--CchhHH-HHHHHHHHHhCCcEEEEEcCC----CCCCCCCCCCCCCC
Q 000272 196 GGVISLDWPSNLDLHEEHGLDTTLLLVPGTAE--GSIEKR-IRLFVCEALRRGFFPVVMNPR----GCGGSPLTTSRLFT 268 (1744)
Q Consensus 196 GG~IaLDW~~p~~~~~~~g~~P~VVLLHGltG--GS~~sY-Ir~La~~La~~GYrVVVfD~R----GhGgSpltsprly~ 268 (1744)
...+++-.+.+...... . -|++|++||+.- |+...+ .......+..+..-||.+++| |+.... .....-+
T Consensus 94 EDCLylNV~tp~~~~~~-~-~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~-d~~~~gN 170 (545)
T KOG1516|consen 94 EDCLYLNVYTPQGCSES-K-LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTG-DSAAPGN 170 (545)
T ss_pred CCCceEEEeccCCCccC-C-CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecC-CCCCCCc
Confidence 34566777765321111 1 699999999521 111111 223333445557889999999 332221 1111122
Q ss_pred cCcHHHHHHHHHHHHhhC---C--CCcEEEEEecHHHHHHHHHH
Q 000272 269 AADSDDICTAIQFIGKAR---P--WTTLMSVGWGYGANMLTKYL 307 (1744)
Q Consensus 269 ag~tdDL~aaId~Lrkry---P--~spIvLVGhSMGG~IaL~YL 307 (1744)
++ ..|...+++|+++.- + ..++.++|||.||..+-...
T Consensus 171 ~g-l~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 171 LG-LFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred cc-HHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHh
Confidence 22 359999999998763 2 35899999999997764433
No 216
>COG1295 Rbn Ribonuclease BN family enzyme [Replication, recombination, and repair]
Probab=81.23 E-value=30 Score=41.92 Aligned_cols=44 Identities=25% Similarity=0.440 Sum_probs=31.2
Q ss_pred hcccCcchhhhhHHHHHhhccccccchhHHHHHHHH-hhc-CchhHH
Q 000272 1419 LGQKGGLLKLVGKLALLWGGLRGAMSLTEKLILFLH-LAD-RPLLQR 1463 (1744)
Q Consensus 1419 ~~~~~~~~~~~~~~~~~~~~~~~~~slt~~~~~~~~-~~~-~P~~~r 1463 (1744)
+.|++|.+-.+|=++++|.|.+|-=++ ++=++..+ ..+ ++.+.+
T Consensus 95 ~~~~~~~~~~~g~~~~lwtas~~~~al-~~~lN~i~~~~~~r~~~~~ 140 (303)
T COG1295 95 LSQSRGSLLSLGLVVALWTASNGMSAL-RDALNKIWRVKPRRSFIRR 140 (303)
T ss_pred hcCCCCCcHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCCCCCchHHH
Confidence 456677776679999999999998888 66666665 333 344443
No 217
>PRK00068 hypothetical protein; Validated
Probab=81.11 E-value=19 Score=49.57 Aligned_cols=14 Identities=14% Similarity=0.114 Sum_probs=9.1
Q ss_pred cchHHHHHHhHHhh
Q 000272 1670 SLSVPIGLRTGIMA 1683 (1744)
Q Consensus 1670 SLWlpIGLHagWn~ 1683 (1744)
++..+...|.+...
T Consensus 206 ~~~~~ar~hl~~l~ 219 (970)
T PRK00068 206 GISRFARKQLAVLA 219 (970)
T ss_pred CCCHHHHHHHHHHH
Confidence 56677778865543
No 218
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=79.80 E-value=2.7 Score=52.16 Aligned_cols=84 Identities=8% Similarity=0.043 Sum_probs=44.2
Q ss_pred CCcEEEEEcCCCCCchhHHHHHHHHHHHhC--CcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEE
Q 000272 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRR--GFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLM 292 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sYIr~La~~La~~--GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIv 292 (1744)
....||+.||+.+++ ..|++..+..+... ++.+++...+|.-......-+....+..+++.+.+... ...+|-
T Consensus 79 ~~HLvVlthGi~~~~-~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~----si~kIS 153 (405)
T KOG4372|consen 79 PKHLVVLTHGLHGAD-MEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDY----SIEKIS 153 (405)
T ss_pred CceEEEecccccccc-HHHHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHHHhhhhhcc----ccceee
Confidence 356899999997633 44565656555543 34444444443321111111222223334433333222 136899
Q ss_pred EEEecHHHHHH
Q 000272 293 SVGWGYGANML 303 (1744)
Q Consensus 293 LVGhSMGG~Ia 303 (1744)
.+|||+||.++
T Consensus 154 fvghSLGGLva 164 (405)
T KOG4372|consen 154 FVGHSLGGLVA 164 (405)
T ss_pred eeeeecCCeee
Confidence 99999999664
No 219
>PRK10263 DNA translocase FtsK; Provisional
Probab=79.38 E-value=8.1 Score=54.26 Aligned_cols=13 Identities=15% Similarity=0.309 Sum_probs=5.6
Q ss_pred hHHHHHHHhHhcC
Q 000272 1633 IIISGLAFALSQR 1645 (1744)
Q Consensus 1633 IIISSLLFALlHl 1645 (1744)
++++++.|+.+|+
T Consensus 122 LLLas~gLaa~~~ 134 (1355)
T PRK10263 122 LILTSCGLAAINA 134 (1355)
T ss_pred HHHHHHHHHHhcc
Confidence 3344444444443
No 220
>PRK04214 rbn ribonuclease BN/unknown domain fusion protein; Reviewed
Probab=79.19 E-value=57 Score=41.21 Aligned_cols=60 Identities=22% Similarity=0.288 Sum_probs=39.3
Q ss_pred HHHHHHHhhcccCcchhhhhHHHHHhhccccccchhHHHHHHHHh--hcCchhHHHHHHHHHH
Q 000272 1411 RLVAMLADLGQKGGLLKLVGKLALLWGGLRGAMSLTEKLILFLHL--ADRPLLQRILGFVGMV 1471 (1744)
Q Consensus 1411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~slt~~~~~~~~~--~~~P~~~rIllFllml 1471 (1744)
.+...+.++-++.|-|-.+|=+.|+|+.+.+..++ ++-++..+= +.+|.+.|++.|..++
T Consensus 86 ~i~~~l~~~~~~~~~l~~ig~~~ll~ta~~~~~~i-e~a~N~Iw~v~~~R~~~~~~~~~~~vl 147 (412)
T PRK04214 86 SVFDYLNQFREQAGRLTAAGSVALVVTLLILLHTI-EQTFNRIWRVNSARPWLTRFLVYWTVL 147 (412)
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCCCCCcHHHHHHHHHHHH
Confidence 45556666655667788999999999988766554 444444332 4567888877654433
No 221
>COG4377 Predicted membrane protein [Function unknown]
Probab=78.36 E-value=54 Score=37.73 Aligned_cols=37 Identities=16% Similarity=0.064 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHhhHHHHHhhcCCchhhHHHHHHHhHhcC
Q 000272 1604 ATVVVLVEELLFRSWLPEEIAADLDYHRGIIISGLAFALSQR 1645 (1744)
Q Consensus 1604 allv~l~EELLFRG~L~~~L~~~~g~~~AIIISSLLFALlHl 1645 (1744)
++.+++.||-- |=..++.|.+|-+-| ..++.||+-|.
T Consensus 84 ~lMAg~FEE~g-R~l~~rfl~kR~~~~----Ad~lAyglGHg 120 (258)
T COG4377 84 LLMAGFFEETG-RLLFFRFLEKRSLEK----ADALAYGLGHG 120 (258)
T ss_pred HHHHHHHHHHh-HHHHHHHHHhCcccc----hhHHHHhcccc
Confidence 34468999953 545555666655444 35667777776
No 222
>PRK12438 hypothetical protein; Provisional
Probab=78.34 E-value=47 Score=46.10 Aligned_cols=32 Identities=6% Similarity=0.118 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHHHHH--HHHHhhcccccC
Q 000272 1542 VQNFLKGLIAGVMLVLLIQS--LNAVLGCVSFSW 1573 (1744)
Q Consensus 1542 ~r~ll~GLllGvlli~lv~l--i~~llG~i~~~~ 1573 (1744)
+..++.++++.++++.++.. +-+++|.+.+..
T Consensus 167 f~~~l~~~l~~~~~~~~i~~~~~~yl~g~irl~~ 200 (991)
T PRK12438 167 FYRSVLNWLFVAVVLAFLASLLTHYLFGGLRLTT 200 (991)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 34556666665555554433 335667666543
No 223
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=77.90 E-value=0.71 Score=54.22 Aligned_cols=27 Identities=15% Similarity=0.449 Sum_probs=0.0
Q ss_pred cccccccccCchhHHHHHHHHHHHHHHHHH
Q 000272 1529 LEQYGLDITSLPKVQNFLKGLIAGVMLVLL 1558 (1744)
Q Consensus 1529 l~slGL~~~~~~~~r~ll~GLllGvlli~l 1558 (1744)
+++||-.++- +..|+..+++.++++++
T Consensus 129 Lr~~GAs~Wt---iLaFcLAF~LaivlLII 155 (381)
T PF05297_consen 129 LRELGASFWT---ILAFCLAFLLAIVLLII 155 (381)
T ss_dssp ------------------------------
T ss_pred HHHhhhHHHH---HHHHHHHHHHHHHHHHH
Confidence 4567766432 34455555554444433
No 224
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=77.76 E-value=1.5e+02 Score=36.26 Aligned_cols=52 Identities=19% Similarity=0.217 Sum_probs=35.9
Q ss_pred HHHHHHhhHHHHHhhcCCchhhHHHHHHHhHhcCCcch-HHHHHHHHHHHHHHH
Q 000272 1612 ELLFRSWLPEEIAADLDYHRGIIISGLAFALSQRSPQA-IPGLWLLSLALAGVR 1664 (1744)
Q Consensus 1612 ELLFRG~L~~~L~~~~g~~~AIIISSLLFALlHlsl~~-~i~lfLlGLvLa~ay 1664 (1744)
.+-.||..+-.+....| +.++++.+++=-+.+..+.- ++.+++.-++|..++
T Consensus 152 ~lN~r~a~LHvl~D~Lg-sv~vIia~i~i~~~~w~~~Dpi~si~i~~lil~~a~ 204 (296)
T COG1230 152 NLNMRGAYLHVLGDALG-SVGVIIAAIVIRFTGWSWLDPILSIVIALLILSSAW 204 (296)
T ss_pred cchHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCCccchHHHHHHHHHHHHHHH
Confidence 59999999988877766 77888888888888876543 333444444444443
No 225
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=77.39 E-value=13 Score=43.89 Aligned_cols=69 Identities=12% Similarity=0.092 Sum_probs=45.7
Q ss_pred HHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcC----cHHHHHHHHHHHHhhCC----CCcEEEEEecHHHHHHH
Q 000272 233 RIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAA----DSDDICTAIQFIGKARP----WTTLMSVGWGYGANMLT 304 (1744)
Q Consensus 233 YIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag----~tdDL~aaId~LrkryP----~spIvLVGhSMGG~IaL 304 (1744)
.++.+.+.++++||.|++.=+.= .+-|.. -...++.+++.+..+.. .-|++.+|||||.-+-+
T Consensus 35 tYr~lLe~La~~Gy~ViAtPy~~---------tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhl 105 (250)
T PF07082_consen 35 TYRYLLERLADRGYAVIATPYVV---------TFDHQAIAREVWERFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHL 105 (250)
T ss_pred HHHHHHHHHHhCCcEEEEEecCC---------CCcHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCeeeeecccchHHHH
Confidence 57889999999999999987731 011111 12455566666665432 24889999999997766
Q ss_pred HHHHHh
Q 000272 305 KYLAEV 310 (1744)
Q Consensus 305 ~YLae~ 310 (1744)
.+...+
T Consensus 106 Li~s~~ 111 (250)
T PF07082_consen 106 LIGSLF 111 (250)
T ss_pred HHhhhc
Confidence 655444
No 226
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=76.73 E-value=4.1 Score=48.37 Aligned_cols=53 Identities=15% Similarity=0.197 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChh
Q 000272 272 SDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLE 329 (1744)
Q Consensus 272 tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~ 329 (1744)
..+...++..+++.||..+|.+-|||+||.++...-.+++ + -+|+..+|-|..
T Consensus 259 ySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg----l-P~VaFesPGd~~ 311 (425)
T KOG4540|consen 259 YSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG----L-PVVAFESPGDAY 311 (425)
T ss_pred hHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC----C-ceEEecCchhhh
Confidence 4566677777888899999999999999998876655554 2 245566665544
No 227
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=76.73 E-value=4.1 Score=48.37 Aligned_cols=53 Identities=15% Similarity=0.197 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChh
Q 000272 272 SDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLE 329 (1744)
Q Consensus 272 tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~ 329 (1744)
..+...++..+++.||..+|.+-|||+||.++...-.+++ + -+|+..+|-|..
T Consensus 259 ySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg----l-P~VaFesPGd~~ 311 (425)
T COG5153 259 YSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG----L-PVVAFESPGDAY 311 (425)
T ss_pred hHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC----C-ceEEecCchhhh
Confidence 4566677777888899999999999999998876655554 2 245566665544
No 228
>COG1480 Predicted membrane-associated HD superfamily hydrolase [General function prediction only]
Probab=76.41 E-value=1e+02 Score=41.30 Aligned_cols=30 Identities=20% Similarity=0.313 Sum_probs=17.1
Q ss_pred hhhccccCcchhhhhhHHHHHHHHHHHHHhh
Q 000272 1166 IEVDRRLGPYDRKEMESDLARDLERVATDIS 1196 (1744)
Q Consensus 1166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1196 (1744)
.||-|-++..+.+++|-.+-- +++++...+
T Consensus 105 ~~vk~~~e~~~~~~~e~~~~~-v~~~~~~l~ 134 (700)
T COG1480 105 NEVKRSLEENEDENTEYSLKQ-VKQLKDRLL 134 (700)
T ss_pred HHHHhhhcccchhhHHHHHHH-HHHHHHHHh
Confidence 466677777777776666543 444444333
No 229
>PLN02847 triacylglycerol lipase
Probab=76.27 E-value=4.3 Score=52.74 Aligned_cols=36 Identities=11% Similarity=-0.060 Sum_probs=27.5
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHH
Q 000272 274 DICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAE 309 (1744)
Q Consensus 274 DL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae 309 (1744)
.+...|..+...||.-+++++||||||+++...+..
T Consensus 236 ~i~~~L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 236 LSTPCLLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 444455555667888899999999999998776544
No 230
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=76.17 E-value=98 Score=41.25 Aligned_cols=44 Identities=14% Similarity=0.181 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHH--HHhhHHHHHhhcCCchhhHHHHHHHhHh
Q 000272 1600 GIVTATVVVLVEELLF--RSWLPEEIAADLDYHRGIIISGLAFALS 1643 (1744)
Q Consensus 1600 ~lllallv~l~EELLF--RG~L~~~L~~~~g~~~AIIISSLLFALl 1643 (1744)
++++..+-++.|=... ++++..+|.++...+.+.++-+.+++.+
T Consensus 280 G~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~ 325 (599)
T PF06609_consen 280 GFVLLVAFVVWEWFGAPKDPLFPHRLFKDRRGFAALLVISFISGMN 325 (599)
T ss_pred HHHHHHHHHHhhhhccCCCCcCCHHHhccchHHHHHHHHHHHHHHH
Confidence 3333333366655544 4677777777644344444444444433
No 231
>PF03631 Virul_fac_BrkB: Virulence factor BrkB; InterPro: IPR017039 This entry represents the uncharacterised protein family UPF0761. It includes the E. coli gene product of yihY, and was previously thought to be a family of tRNA-processing ribonuclease BN proteins []. This has been shown to be incorrect [].; GO: 0004540 ribonuclease activity
Probab=75.30 E-value=1.6e+02 Score=34.50 Aligned_cols=62 Identities=26% Similarity=0.359 Sum_probs=39.4
Q ss_pred HHHHHHHHhhcccCcchhhhhHHHHHhhccccccchhHHHHHHHHh--hc-CchhHHHHHHHHHHH
Q 000272 1410 ERLVAMLADLGQKGGLLKLVGKLALLWGGLRGAMSLTEKLILFLHL--AD-RPLLQRILGFVGMVL 1472 (1744)
Q Consensus 1410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~slt~~~~~~~~~--~~-~P~~~rIllFllmll 1472 (1744)
+-+..++..+-+.+ -+.++|=+.++|++.++.-++-+-+-.--+. .+ ++.+.+.+..+++++
T Consensus 57 ~~l~~~l~~~~~~~-~~~~i~~~~ll~~a~~~~~~l~~a~~~i~~~~~~~~r~~~~~~~~~~~~~i 121 (260)
T PF03631_consen 57 EQLESFLEQISSSS-SLGLIGILILLWSASSFFASLQRALNRIYGVPPRERRSFWKRRLIALLFLI 121 (260)
T ss_pred hhHHHHHHHHHhcc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCHHHHHHHHHHHHH
Confidence 45556664444444 7788999999999999998886655555555 33 345555444333333
No 232
>PRK10263 DNA translocase FtsK; Provisional
Probab=74.99 E-value=39 Score=47.98 Aligned_cols=19 Identities=16% Similarity=-0.011 Sum_probs=12.9
Q ss_pred cCCchhhHHHHHHHhHhcC
Q 000272 1627 LDYHRGIIISGLAFALSQR 1645 (1744)
Q Consensus 1627 ~g~~~AIIISSLLFALlHl 1645 (1744)
.|-+++.+++.++..+++.
T Consensus 142 gGGIIG~lLs~lL~~LfG~ 160 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHS 160 (1355)
T ss_pred ccchHHHHHHHHHHHHHhH
Confidence 4566677777777777765
No 233
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=73.95 E-value=4.7 Score=49.42 Aligned_cols=59 Identities=12% Similarity=0.205 Sum_probs=42.3
Q ss_pred CCcCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHh---CCC-CCceEEEEecCC
Q 000272 267 FTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEV---GER-TPLTAVTCIDNP 325 (1744)
Q Consensus 267 y~ag~tdDL~aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~---ge~-s~L~AaVlISpP 325 (1744)
|...|...+.+.++.+..+||.-.+.+.||||||.+|...+..- +.. .....+++.+.|
T Consensus 149 ~~~~~~~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~P 211 (336)
T KOG4569|consen 149 YTSLWNSGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQP 211 (336)
T ss_pred hccccHHHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCC
Confidence 33345578888888888999988999999999999998877553 211 123455566555
No 234
>TIGR02916 PEP_his_kin putative PEP-CTERM system histidine kinase. Members of this protein family have a novel N-terminal domain, a single predicted membrane-spanning helix, and a predicted cystosolic histidine kinase domain. We designate this protein PrsK, and its companion DNA-binding response regulator protein (TIGR02915) PrsR. These predicted signal-transducing proteins appear to enable enhancer-dependent transcriptional activation. The prsK gene is often associated with exopolysaccharide biosynthesis genes.
Probab=73.79 E-value=92 Score=41.66 Aligned_cols=26 Identities=31% Similarity=0.547 Sum_probs=16.3
Q ss_pred CcchhhhhHHHHHhhccccccchhHH
Q 000272 1423 GGLLKLVGKLALLWGGLRGAMSLTEK 1448 (1744)
Q Consensus 1423 ~~~~~~~~~~~~~~~~~~~~~slt~~ 1448 (1744)
|.+|-+.+=+..+|.+.-++|++..-
T Consensus 27 ~~~l~~a~~~~~~w~~~~~~~~~~~~ 52 (679)
T TIGR02916 27 GGLLLLAAALSAVWALASAALVYMDY 52 (679)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccccc
Confidence 34455555555789888777765533
No 235
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=73.66 E-value=14 Score=47.24 Aligned_cols=92 Identities=12% Similarity=0.052 Sum_probs=68.7
Q ss_pred HHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCC-------CcCcHHHHHHHHHHHHhhCC---CCcEEEEEecHHHHHHHH
Q 000272 236 LFVCEALRRGFFPVVMNPRGCGGSPLTTSRLF-------TAADSDDICTAIQFIGKARP---WTTLMSVGWGYGANMLTK 305 (1744)
Q Consensus 236 ~La~~La~~GYrVVVfD~RGhGgSpltsprly-------~ag~tdDL~aaId~LrkryP---~spIvLVGhSMGG~IaL~ 305 (1744)
.....+.+.|-.|+.+.||=+|.|........ ......|+.++|..+..+++ ..|++.+|.|+-|.++..
T Consensus 109 ~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW 188 (514)
T KOG2182|consen 109 TWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAW 188 (514)
T ss_pred hHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHH
Confidence 44566778899999999999997732221111 11235899999999998885 238999999999998887
Q ss_pred HHHHhCCCCCceEEEEecCCCChh
Q 000272 306 YLAEVGERTPLTAVTCIDNPFDLE 329 (1744)
Q Consensus 306 YLae~ge~s~L~AaVlISpP~Dl~ 329 (1744)
.=..+|+ .+.|+|+-|+|....
T Consensus 189 ~R~~yPe--l~~GsvASSapv~A~ 210 (514)
T KOG2182|consen 189 FREKYPE--LTVGSVASSAPVLAK 210 (514)
T ss_pred HHHhCch--hheeecccccceeEE
Confidence 7777776 578888888887653
No 236
>TIGR00765 yihY_not_rbn YihY family protein (not ribonuclease BN). Members of this subfamily include the largely uncharacterized BrkB (Bordetella resist killing by serum B) from Bordetella pertussis. Some members have an additional C-terminal domain. Paralogs from E. coli (yhjD) and Mycobactrium tuberculosis (Rv3335c) are part of a smaller, related subfamily that form their own cluster.
Probab=73.64 E-value=1.2e+02 Score=35.66 Aligned_cols=58 Identities=10% Similarity=0.133 Sum_probs=34.8
Q ss_pred HHHHHHHhh-cccCcchhhhhHHHHHhhccccccchhHHHHHHHH-h-hcCchhHHHHHHHHH
Q 000272 1411 RLVAMLADL-GQKGGLLKLVGKLALLWGGLRGAMSLTEKLILFLH-L-ADRPLLQRILGFVGM 1470 (1744)
Q Consensus 1411 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~slt~~~~~~~~-~-~~~P~~~rIllFllm 1470 (1744)
-+..++.++ .|.|++ -.+|=+.+||++.++..++-+- ++... . .+++.+.++..++.+
T Consensus 69 ~i~~~i~~~~~~~~~~-~~ig~~~~lwsas~~~~~l~~~-ln~i~~~~~~r~~~~~~~~~~~~ 129 (259)
T TIGR00765 69 MIKDYIEQFVKNSNKL-TAVGIVSLIVTALLLINNIDST-LNKIWRVKPRRSAIFSFAIYWTI 129 (259)
T ss_pred HHHHHHHHHHHhCCch-HHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCCCCcHHHHHHHHHHH
Confidence 333444443 455655 4789999999999988877543 33332 2 345666665554433
No 237
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=73.39 E-value=26 Score=44.98 Aligned_cols=27 Identities=15% Similarity=0.180 Sum_probs=15.1
Q ss_pred hHHHHHHHHHHHHHhhccCccchhhhh
Q 000272 1715 GVVGLAFSLILAIILYPRQPLLSKKLE 1741 (1744)
Q Consensus 1715 GliGlv~llliaiil~~~k~l~~k~~~ 1741 (1744)
|++.+++++++.+++..+=+.++...+
T Consensus 449 g~~~l~~lf~~gl~ll~~v~~~~g~~~ 475 (477)
T PF11700_consen 449 GFLFLLVLFLIGLILLFFVDVEKGRED 475 (477)
T ss_pred HHHHHHHHHHHHHHHHhhccchhhhhc
Confidence 566666666666655555454444333
No 238
>PF13367 PrsW-protease: Protease prsW family
Probab=72.68 E-value=40 Score=37.79 Aligned_cols=33 Identities=9% Similarity=-0.023 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHhcC--------CcchHHHHHHhHHhhhhh
Q 000272 1654 WLLSLALAGVRQRSQ--------GSLSVPIGLRTGIMASSF 1686 (1744)
Q Consensus 1654 fLlGLvLa~aylrtt--------GSLWlpIGLHagWn~~~~ 1686 (1744)
.++|+.++++..+.. +-+..++.+|+.||+...
T Consensus 133 ~i~g~~l~~~~~~~~~~~~~~~~~~~~~a~~lH~~~N~~~~ 173 (191)
T PF13367_consen 133 AIFGYGLGLAKRRRKRGFRLALLLGFLLAVLLHGLWNFPLS 173 (191)
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 345555555553211 236788999999998653
No 239
>PLN02802 triacylglycerol lipase
Probab=72.63 E-value=6.1 Score=50.64 Aligned_cols=38 Identities=11% Similarity=0.167 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHhhCCCC--cEEEEEecHHHHHHHHHHHHh
Q 000272 273 DDICTAIQFIGKARPWT--TLMSVGWGYGANMLTKYLAEV 310 (1744)
Q Consensus 273 dDL~aaId~LrkryP~s--pIvLVGhSMGG~IaL~YLae~ 310 (1744)
+++...|..+..+|+.. .|++.||||||.+++..+...
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 45666666666778753 789999999999998877654
No 240
>PLN02310 triacylglycerol lipase
Probab=71.69 E-value=6.2 Score=49.51 Aligned_cols=38 Identities=11% Similarity=0.109 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhhCC----CCcEEEEEecHHHHHHHHHHHHh
Q 000272 273 DDICTAIQFIGKARP----WTTLMSVGWGYGANMLTKYLAEV 310 (1744)
Q Consensus 273 dDL~aaId~LrkryP----~spIvLVGhSMGG~IaL~YLae~ 310 (1744)
+.+.+.|..+...|+ ..+|.+.||||||.+++..+...
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl 230 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEA 230 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHH
Confidence 445555555555553 45899999999999998877553
No 241
>PF03699 UPF0182: Uncharacterised protein family (UPF0182); InterPro: IPR005372 This family contains uncharacterised integral membrane proteins.; GO: 0016021 integral to membrane
Probab=71.65 E-value=43 Score=45.54 Aligned_cols=12 Identities=17% Similarity=0.052 Sum_probs=6.8
Q ss_pred hHHHHHHhHHhh
Q 000272 1672 SVPIGLRTGIMA 1683 (1744)
Q Consensus 1672 WlpIGLHagWn~ 1683 (1744)
-.+.-.|.+...
T Consensus 196 ~~~a~~hL~~L~ 207 (774)
T PF03699_consen 196 SRAARRHLSILL 207 (774)
T ss_pred CHHHHHHHHHHH
Confidence 356666765543
No 242
>PLN02324 triacylglycerol lipase
Probab=71.62 E-value=5.3 Score=50.17 Aligned_cols=38 Identities=13% Similarity=0.128 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHhhCCCC--cEEEEEecHHHHHHHHHHHHh
Q 000272 273 DDICTAIQFIGKARPWT--TLMSVGWGYGANMLTKYLAEV 310 (1744)
Q Consensus 273 dDL~aaId~LrkryP~s--pIvLVGhSMGG~IaL~YLae~ 310 (1744)
+.+...|..+..+||.. .|.+.||||||.+++..+...
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~dl 236 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAADL 236 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHHH
Confidence 45666677777788853 699999999999999887653
No 243
>PRK00068 hypothetical protein; Validated
Probab=71.53 E-value=99 Score=43.10 Aligned_cols=9 Identities=11% Similarity=0.471 Sum_probs=3.9
Q ss_pred HHHHHHHhh
Q 000272 1512 MILTMKWGR 1520 (1744)
Q Consensus 1512 lILl~lW~~ 1520 (1744)
++.+.+|..
T Consensus 74 ~~~~~~~la 82 (970)
T PRK00068 74 IVFISLWLA 82 (970)
T ss_pred HHHHHHHHH
Confidence 344444443
No 244
>PLN03037 lipase class 3 family protein; Provisional
Probab=71.09 E-value=6.1 Score=50.76 Aligned_cols=37 Identities=11% Similarity=0.070 Sum_probs=25.9
Q ss_pred HHHHHHHHHHhhCC----CCcEEEEEecHHHHHHHHHHHHh
Q 000272 274 DICTAIQFIGKARP----WTTLMSVGWGYGANMLTKYLAEV 310 (1744)
Q Consensus 274 DL~aaId~LrkryP----~spIvLVGhSMGG~IaL~YLae~ 310 (1744)
.+.+.|..+.+.|+ ..+|++.||||||.+++..+...
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DI 339 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEA 339 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHH
Confidence 34444555554554 34799999999999998877553
No 245
>TIGR00766 ribonuclease, putative. This family shows similarity to ribonuclease BN
Probab=71.06 E-value=1.3e+02 Score=35.63 Aligned_cols=53 Identities=19% Similarity=0.166 Sum_probs=32.1
Q ss_pred HHHHHHhhcccCcchhhhhHHHHHhhccccccchhHHHHHHHHh----hcCchhHHHH
Q 000272 1412 LVAMLADLGQKGGLLKLVGKLALLWGGLRGAMSLTEKLILFLHL----ADRPLLQRIL 1465 (1744)
Q Consensus 1412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~slt~~~~~~~~~----~~~P~~~rIl 1465 (1744)
+...+.++-.+++.+-.+|=+.++|++.++..++- |=++...- .+++.+.|.+
T Consensus 70 v~~~l~~~~~~~~~l~~ig~~~ll~tas~~~~~l~-~aln~i~~~~~~~~~~~~~~~l 126 (263)
T TIGR00766 70 LKNTMNTAVDARTTVGLIGLATALYSGLNWMGNLR-EAISDVWERPPAPAEKLRTKYL 126 (263)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCCCCCCcchHHHHH
Confidence 34444444333345578899999999999888774 44455442 2345555543
No 246
>PLN02719 triacylglycerol lipase
Probab=70.65 E-value=5.7 Score=50.95 Aligned_cols=39 Identities=10% Similarity=0.131 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHhhCCC-----CcEEEEEecHHHHHHHHHHHHh
Q 000272 272 SDDICTAIQFIGKARPW-----TTLMSVGWGYGANMLTKYLAEV 310 (1744)
Q Consensus 272 tdDL~aaId~LrkryP~-----spIvLVGhSMGG~IaL~YLae~ 310 (1744)
.+++.+.|..+..+||. .+|.+.||||||.+++..+...
T Consensus 276 ReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl 319 (518)
T PLN02719 276 REQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDV 319 (518)
T ss_pred HHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHH
Confidence 35677777777777874 3899999999999999877653
No 247
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=67.86 E-value=67 Score=40.01 Aligned_cols=108 Identities=9% Similarity=0.058 Sum_probs=65.1
Q ss_pred EEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCC--CCcEEEEE
Q 000272 218 TLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARP--WTTLMSVG 295 (1744)
Q Consensus 218 ~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP--~spIvLVG 295 (1744)
+||++=||+ |+.+.++..+.....+.||.++.+-.+=+--....+.+.. ...+....+..+...+. ..|++..-
T Consensus 40 ~Iv~~~gWa-g~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~---sl~~~~~~l~~L~~~~~~~~~pi~fh~ 115 (350)
T KOG2521|consen 40 PIVVLLGWA-GAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRIL---SLSLASTRLSELLSDYNSDPCPIIFHV 115 (350)
T ss_pred cEEEEeeec-cccchhHHHHHHHHhcCCceEEEecCcccccccccccccc---hhhHHHHHHHHHhhhccCCcCceEEEE
Confidence 455555665 5667788888888899999999988875543322221211 12344345555544443 35888889
Q ss_pred ecHHHHHHHHHH-HHh----CCCCC-ceEEEEecCCCChh
Q 000272 296 WGYGANMLTKYL-AEV----GERTP-LTAVTCIDNPFDLE 329 (1744)
Q Consensus 296 hSMGG~IaL~YL-ae~----ge~s~-L~AaVlISpP~Dl~ 329 (1744)
|||||..++... .+. +.... ..+.+..+.|....
T Consensus 116 FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~ 155 (350)
T KOG2521|consen 116 FSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSS 155 (350)
T ss_pred ecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccc
Confidence 999998877655 222 11112 44466666666543
No 248
>PLN02761 lipase class 3 family protein
Probab=67.23 E-value=7.3 Score=50.13 Aligned_cols=38 Identities=8% Similarity=0.108 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHhhCC------CCcEEEEEecHHHHHHHHHHHH
Q 000272 272 SDDICTAIQFIGKARP------WTTLMSVGWGYGANMLTKYLAE 309 (1744)
Q Consensus 272 tdDL~aaId~LrkryP------~spIvLVGhSMGG~IaL~YLae 309 (1744)
.+++...|..+...|| ..+|++.||||||.+++..+..
T Consensus 271 R~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 271 REQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 3567777777777773 3479999999999999887754
No 249
>PRK10929 putative mechanosensitive channel protein; Provisional
Probab=66.82 E-value=84 Score=44.54 Aligned_cols=17 Identities=24% Similarity=0.466 Sum_probs=10.3
Q ss_pred hHHHHHHHHHHHHHhhH
Q 000272 1181 ESDLARDLERVATDISL 1197 (1744)
Q Consensus 1181 ~~~~~~~~~~~~~~~~~ 1197 (1744)
-.+|+..+.+.+..+..
T Consensus 267 N~~Ls~~L~~~t~~~n~ 283 (1109)
T PRK10929 267 NRELSQALNQQAQRMDL 283 (1109)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45666666666666554
No 250
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=66.56 E-value=2.4e+02 Score=34.52 Aligned_cols=253 Identities=14% Similarity=0.136 Sum_probs=120.6
Q ss_pred CcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEEEE
Q 000272 216 DTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVG 295 (1744)
Q Consensus 216 ~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIvLVG 295 (1744)
+|.|+++-.+. |......|..++.++.. ..|++-||--.--.|+....+-...+.+-+.++|+++ -|...++.|.
T Consensus 103 dPkvLivapms-GH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~---Gp~~hv~aVC 177 (415)
T COG4553 103 DPKVLIVAPMS-GHYATLLRGTVEALLPY-HDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFL---GPDAHVMAVC 177 (415)
T ss_pred CCeEEEEeccc-ccHHHHHHHHHHHhccc-cceeEeeccccceeecccCCccHHHHHHHHHHHHHHh---CCCCcEEEEe
Confidence 57788887764 45555677888777654 6789999976544444433321112223334444444 3443343332
Q ss_pred ec-HHHHHHHHHHHHhCCCCCceEEEEecCCCChhhhh---------cc-------------Cc----hhHHhH------
Q 000272 296 WG-YGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEAT---------RS-------------SP----HHIALD------ 342 (1744)
Q Consensus 296 hS-MGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~es~---------~s-------------lp----~~~ly~------ 342 (1744)
.- .-=..+....++.++...-....+++.|.|....- ++ ++ .+++|.
T Consensus 178 QP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR~nPTavN~lA~~k~~~WF~~n~vm~vP~~ypg~gR~VYPGFlQla 257 (415)
T COG4553 178 QPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDARKNPTAVNELATEKSIEWFRDNVVMQVPPPYPGFGRRVYPGFLQLA 257 (415)
T ss_pred cCCchHHHHHHHHHhcCCCCCCceeeeecCccccccCcHHHhHhhhccchHHHHhCeeeecCCCCCCccccccccHHHhh
Confidence 22 11112222334444433345667788888764210 00 01 011221
Q ss_pred HHHHHHHHHHHHhhhhhhhccCCCcCHHHHhhhhcHHHHHHHHhhhc-----cchhhHHHHHhhcCc-----ch-----h
Q 000272 343 EKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVS-----YGFEAIEDFYSKSST-----RS-----V 407 (1744)
Q Consensus 343 ~~L~~~Lk~~L~r~~~lf~~~~~~~Did~vlkarTirEFDd~~tap~-----~Gf~sv~eYY~~aS~-----~~-----~ 407 (1744)
..+.-++.+-+..|++.|.... .-|.+.+. ..++|-+.+.+.+ |-..++++-|.+... .+ .
T Consensus 258 gFmsmNldrH~~aH~~~~~~Lv-~~D~~~Ae---~h~~FYdEYlavmdl~aEfYLqTid~VFqq~~LpkG~~vhrg~~vd 333 (415)
T COG4553 258 GFMSMNLDRHIDAHKDFFLSLV-KNDGDSAE---KHREFYDEYLAVMDLTAEFYLQTIDEVFQQHALPKGEMVHRGKPVD 333 (415)
T ss_pred hHhhcChhhhHHHHHHHHHHHH-cccchhHH---HHHHHHHHHHHHccchHHHHHHHHHHHHHHhcccCCceeecCCcCC
Confidence 2223344455555555543211 11222222 2334433332211 112234443333221 11 1
Q ss_pred cCcC-CccEEEEEe-CCCCCCCCC--hHHHHHhcCCCe--EEEEecC-CCccccCCCCchhHHHHHHHHHHHHHHHhh
Q 000272 408 VGNI-KIPVLFIQN-DAGAVPPFS--IPRSSIAENPFT--SLLLCSC-LPSSVIGGGRAAESWCQNLVIEWLSAVELG 478 (1744)
Q Consensus 408 L~~I-kVPVLIIhG-DDp~VP~~a--ip~~la~~nPnv--~LvLt~g-GHH~gF~e~~~~~sWv~r~VlEFL~av~~~ 478 (1744)
...| +|-++-|-| .|++.-... ....+|..+|.. +-.+-++ ||-+.|.+ .+-+..+...+.+|+.+.+..
T Consensus 334 p~~I~~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnG-srfr~eIvPri~dFI~~~d~~ 410 (415)
T COG4553 334 PTAITNVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNG-SRFREEIVPRIRDFIRRYDRS 410 (415)
T ss_pred hhheeceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccceecc-chHHHHHHHHHHHHHHHhCcc
Confidence 2223 367788889 888876432 234566666643 2233444 55555554 444556778899999887654
No 251
>PLN02753 triacylglycerol lipase
Probab=66.17 E-value=7.9 Score=49.84 Aligned_cols=37 Identities=11% Similarity=0.139 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHhhCC-----CCcEEEEEecHHHHHHHHHHHH
Q 000272 273 DDICTAIQFIGKARP-----WTTLMSVGWGYGANMLTKYLAE 309 (1744)
Q Consensus 273 dDL~aaId~LrkryP-----~spIvLVGhSMGG~IaL~YLae 309 (1744)
+++.+.|..+..+|+ ..+|.+.||||||.+++..+..
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 556666666666675 3589999999999999887754
No 252
>COG4232 Thiol:disulfide interchange protein [Posttranslational modification, protein turnover, chaperones / Energy production and conversion]
Probab=64.89 E-value=1.2e+02 Score=39.98 Aligned_cols=21 Identities=38% Similarity=0.985 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhh
Q 000272 1464 ILGFVGMVLVLWSPVLVPLLP 1484 (1744)
Q Consensus 1464 IllFllmllllwlPvaI~llp 1484 (1744)
+..|++-+++.+.|.+++.+|
T Consensus 171 l~afl~GLlL~ftPCVLPmlp 191 (569)
T COG4232 171 LLAFLGGLLLNFTPCVLPMLP 191 (569)
T ss_pred HHHHHHHHHHhhccHhhhhHH
Confidence 345666677778888888887
No 253
>PRK11281 hypothetical protein; Provisional
Probab=64.53 E-value=2e+02 Score=41.18 Aligned_cols=16 Identities=25% Similarity=0.258 Sum_probs=7.5
Q ss_pred hHHHHHHHHHHHHHHH
Q 000272 1649 AIPGLWLLSLALAGVR 1664 (1744)
Q Consensus 1649 ~~i~lfLlGLvLa~ay 1664 (1744)
.++.+.++|..+...+
T Consensus 698 ~l~~l~~~GY~yTa~~ 713 (1113)
T PRK11281 698 ALIVLVVLGYYYTALR 713 (1113)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3344445555554444
No 254
>PF03699 UPF0182: Uncharacterised protein family (UPF0182); InterPro: IPR005372 This family contains uncharacterised integral membrane proteins.; GO: 0016021 integral to membrane
Probab=63.96 E-value=1.8e+02 Score=39.96 Aligned_cols=14 Identities=7% Similarity=0.169 Sum_probs=6.6
Q ss_pred HHHHHHHHHHhhhe
Q 000272 1509 IAVMILTMKWGRRV 1522 (1744)
Q Consensus 1509 la~lILl~lW~~r~ 1522 (1744)
+++++.+-+|..++
T Consensus 60 ~~~~~~~~~~~a~r 73 (774)
T PF03699_consen 60 FFLFVFLNLWLAYR 73 (774)
T ss_pred HHHHHHHHHHHHHh
Confidence 33344455566543
No 255
>PRK10369 heme lyase subunit NrfE; Provisional
Probab=63.68 E-value=4.9e+02 Score=34.81 Aligned_cols=8 Identities=25% Similarity=0.389 Sum_probs=4.9
Q ss_pred HHHhhccc
Q 000272 1415 MLADLGQK 1422 (1744)
Q Consensus 1415 ~~~~~~~~ 1422 (1744)
|++|+|+=
T Consensus 3 m~~elG~~ 10 (571)
T PRK10369 3 FLPEAGFL 10 (571)
T ss_pred cHHHHHHH
Confidence 56666664
No 256
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=63.64 E-value=10 Score=45.77 Aligned_cols=108 Identities=13% Similarity=0.003 Sum_probs=61.0
Q ss_pred CCCcEEEEEcCCCCCchhHHHHHHHHHHHhCC----cEEEEEcCCCCCCCCCCCCCCCCcC-cHHHH-HHHHHHHHhhCC
Q 000272 214 GLDTTLLLVPGTAEGSIEKRIRLFVCEALRRG----FFPVVMNPRGCGGSPLTTSRLFTAA-DSDDI-CTAIQFIGKARP 287 (1744)
Q Consensus 214 g~~P~VVLLHGltGGS~~sYIr~La~~La~~G----YrVVVfD~RGhGgSpltsprly~ag-~tdDL-~aaId~LrkryP 287 (1744)
...|++++.||--. -...-+...+..+...| --+|.+|+- ........+++.. ..+.+ .+++-|+..+||
T Consensus 96 ~k~pvl~~~DG~~~-~~~g~i~~~~dsli~~g~i~pai~vgid~~---d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp 171 (299)
T COG2382 96 EKYPVLYLQDGQDW-FRSGRIPRILDSLIAAGEIPPAILVGIDYI---DVKKRREELHCNEAYWRFLAQELLPYVEERYP 171 (299)
T ss_pred ccccEEEEeccHHH-HhcCChHHHHHHHHHcCCCCCceEEecCCC---CHHHHHHHhcccHHHHHHHHHHhhhhhhccCc
Confidence 35688999998410 00011344555666555 334555542 1111112223222 22333 356678889887
Q ss_pred CC----cEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCC
Q 000272 288 WT----TLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFD 327 (1744)
Q Consensus 288 ~s----pIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~D 327 (1744)
.. .-+++|-||||.+++..+..+++ .+-.++..|+.++
T Consensus 172 ~~~~a~~r~L~G~SlGG~vsL~agl~~Pe--~FG~V~s~Sps~~ 213 (299)
T COG2382 172 TSADADGRVLAGDSLGGLVSLYAGLRHPE--RFGHVLSQSGSFW 213 (299)
T ss_pred ccccCCCcEEeccccccHHHHHHHhcCch--hhceeeccCCccc
Confidence 43 45799999999999998888876 3544555555443
No 257
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=63.36 E-value=2.4 Score=50.09 Aligned_cols=17 Identities=24% Similarity=0.184 Sum_probs=0.0
Q ss_pred cCchhHHHHHHHHHHHH
Q 000272 1457 DRPLLQRILGFVGMVLV 1473 (1744)
Q Consensus 1457 ~~P~~~rIllFllmlll 1473 (1744)
+.|-+-..++|..++++
T Consensus 17 r~p~~~a~l~~~~llll 33 (381)
T PF05297_consen 17 RCPQPHASLLFGLLLLL 33 (381)
T ss_dssp -----------------
T ss_pred CCCCcchhHHHHHHHHH
Confidence 44545455555444433
No 258
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=62.64 E-value=19 Score=46.63 Aligned_cols=84 Identities=12% Similarity=0.067 Sum_probs=50.6
Q ss_pred CcEEEEEcCCCC-----CchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhh-----
Q 000272 216 DTTLLLVPGTAE-----GSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKA----- 285 (1744)
Q Consensus 216 ~P~VVLLHGltG-----GS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~ag~tdDL~aaId~Lrkr----- 285 (1744)
+-.|+-|||+.- -|++.|.|.++ .+.|+-++.+||-=. ....|. .-++.+.-+--|+.+.
T Consensus 396 ~sli~HcHGGGfVAqsSkSHE~YLr~Wa---~aL~cPiiSVdYSLA------PEaPFP-RaleEv~fAYcW~inn~allG 465 (880)
T KOG4388|consen 396 RSLIVHCHGGGFVAQSSKSHEPYLRSWA---QALGCPIISVDYSLA------PEAPFP-RALEEVFFAYCWAINNCALLG 465 (880)
T ss_pred ceEEEEecCCceeeeccccccHHHHHHH---HHhCCCeEEeeeccC------CCCCCC-cHHHHHHHHHHHHhcCHHHhC
Confidence 456888998411 14556777765 456899999999311 111121 2234444444454332
Q ss_pred CCCCcEEEEEecHHHHHHHHHHHH
Q 000272 286 RPWTTLMSVGWGYGANMLTKYLAE 309 (1744)
Q Consensus 286 yP~spIvLVGhSMGG~IaL~YLae 309 (1744)
....+|+++|-|.|||+.+..+.+
T Consensus 466 ~TgEriv~aGDSAGgNL~~~VaLr 489 (880)
T KOG4388|consen 466 STGERIVLAGDSAGGNLCFTVALR 489 (880)
T ss_pred cccceEEEeccCCCcceeehhHHH
Confidence 124699999999999987655433
No 259
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=61.62 E-value=28 Score=39.45 Aligned_cols=42 Identities=19% Similarity=0.303 Sum_probs=37.2
Q ss_pred ccchhHHHHHHHHh--hcCchhHHHHHHHHHHHHHHHHHHHhhh
Q 000272 1442 AMSLTEKLILFLHL--ADRPLLQRILGFVGMVLVLWSPVLVPLL 1483 (1744)
Q Consensus 1442 ~~slt~~~~~~~~~--~~~P~~~rIllFllmllllwlPvaI~ll 1483 (1744)
||-++-+-+..... .++|.|.+.++-+....++|+.+.+...
T Consensus 140 amy~my~y~yr~~ad~sqr~~~~K~~lv~~~sm~lWi~v~i~t~ 183 (226)
T COG4858 140 AMYIMYYYAYRMRADNSQRPGTWKYLLVAVLSMLLWIAVMIATV 183 (226)
T ss_pred HHHHHHHHHHHhhcccccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 78899999999988 8999999999999999999999887544
No 260
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=61.60 E-value=74 Score=35.72 Aligned_cols=75 Identities=16% Similarity=0.295 Sum_probs=46.6
Q ss_pred cEEEEEcCCCCCchhHHHHHHHHHHHhCCcE-EEEEcCCCCCCCCCCCCCCCCcCcHHHHHHHHHHHHhhCCCCcEEEEE
Q 000272 217 TTLLLVPGTAEGSIEKRIRLFVCEALRRGFF-PVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVG 295 (1744)
Q Consensus 217 P~VVLLHGltGGS~~sYIr~La~~La~~GYr-VVVfD~RGhGgSpltsprly~ag~tdDL~aaId~LrkryP~spIvLVG 295 (1744)
..||+.-|| |+..+.+.++. ....|. +++||++..... + |+.+ . ..+.+|.
T Consensus 12 ~LIvyFaGw--gtpps~v~HLi---lpeN~dl~lcYDY~dl~ld-------f------DfsA-y---------~hirlvA 63 (214)
T COG2830 12 HLIVYFAGW--GTPPSAVNHLI---LPENHDLLLCYDYQDLNLD-------F------DFSA-Y---------RHIRLVA 63 (214)
T ss_pred EEEEEEecC--CCCHHHHhhcc---CCCCCcEEEEeehhhcCcc-------c------chhh-h---------hhhhhhh
Confidence 477888887 34444444443 344555 788999755311 1 2221 1 2467899
Q ss_pred ecHHHHHHHHHHHHhCCCCCceEEEEec
Q 000272 296 WGYGANMLTKYLAEVGERTPLTAVTCID 323 (1744)
Q Consensus 296 hSMGG~IaL~YLae~ge~s~L~AaVlIS 323 (1744)
||||-.++-+.+-.. +++.+.+|.
T Consensus 64 wSMGVwvAeR~lqg~----~lksatAiN 87 (214)
T COG2830 64 WSMGVWVAERVLQGI----RLKSATAIN 87 (214)
T ss_pred hhHHHHHHHHHHhhc----cccceeeec
Confidence 999999998888554 466676664
No 261
>PRK07668 hypothetical protein; Validated
Probab=61.39 E-value=3.5e+02 Score=32.56 Aligned_cols=29 Identities=17% Similarity=0.097 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 000272 1542 VQNFLKGLIAGVMLVLLIQSLNAVLGCVS 1570 (1744)
Q Consensus 1542 ~r~ll~GLllGvlli~lv~li~~llG~i~ 1570 (1744)
++.+...++.+++.+++.+++.++..+..
T Consensus 139 ~~~~i~~~~~~~~p~~l~i~i~~l~k~yp 167 (254)
T PRK07668 139 EKWFLIIYLVILIPMLLIVAIMFLNKWYG 167 (254)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 34444555566666666666777766643
No 262
>TIGR03109 exosortase_1 exosortase 1. The predicted protein-sorting transpeptidase that we call exosortase (see TIGR02602) has distinct subclasses that associated with different types of exopolysaccharide production loci. We designate this, the most common type so far, exosortase 1. We propose the gene symbol xrtA, analogous to srtA for the most common type of sortase in Gram-positive bacteria.
Probab=61.27 E-value=2.3e+02 Score=34.13 Aligned_cols=20 Identities=10% Similarity=-0.046 Sum_probs=15.8
Q ss_pred cchHHHHHHHHHHHHHHHHh
Q 000272 1647 PQAIPGLWLLSLALAGVRQR 1666 (1744)
Q Consensus 1647 l~~~i~lfLlGLvLa~aylr 1666 (1744)
+.++..++.+|+++++.+.+
T Consensus 180 lr~l~~~~~l~~l~~~l~~~ 199 (267)
T TIGR03109 180 LRYLIASLAIGALYAYLNFR 199 (267)
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 35678888999999988765
No 263
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=59.75 E-value=2.2e+02 Score=37.52 Aligned_cols=118 Identities=13% Similarity=0.124 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHHH----HhhheecccCCcccccccccCc--hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCC
Q 000272 1501 FACIVGLYIAVMILTMK----WGRRVRGYENSLEQYGLDITSL--PKVQNFLKGLIAGVMLVLLIQSLNAVLGCVSFSWP 1574 (1744)
Q Consensus 1501 l~~lvgLyla~lILl~l----W~~r~~~~~~pl~slGL~~~~~--~~~r~ll~GLllGvlli~lv~li~~llG~i~~~~~ 1574 (1744)
+..++.++..+-+++.+ .+.++.....|.+.-+..+.-+ .+...-..|+++|-++-..+..+++.+-.-++ |.
T Consensus 435 ~~~ll~LwF~isVPLsf~G~y~g~kk~~~e~PvrTNqIpRqIP~q~~y~~~~~~ili~GilPFg~ifIELfFI~~Si-W~ 513 (628)
T KOG1278|consen 435 MVALLFLWFGISVPLSFVGGYFGFKKPAIEHPVRTNQIPRQIPEQPWYLNPIPSILIAGILPFGAIFIELFFILSSI-WL 513 (628)
T ss_pred HHHHHHHHHHhhhhHHHhhHHhhccCCCCCCCcccCCCcccCCCCccccchhhHHHhhcccchHHHHHHHHHHHHHH-Hh
Confidence 34455555555444333 3334444456666655553221 23333455666655555555555554322110 00
Q ss_pred ccccchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCchhhH
Q 000272 1575 SIVTSSLTAMAWLKVYGNISMLACQGIVTATVVVLVEELLFRSWLPEEIAADLDYHRGII 1634 (1744)
Q Consensus 1575 ~~~~s~~~~~~ll~~~~~~~~lil~~lllallv~l~EELLFRG~L~~~L~~~~g~~~AII 1634 (1744)
+ ++.. -+.++ .++..+++-.+=|+=.=+.-++...+++..||--.
T Consensus 514 ~---------qfYY---~FGFL---FlvfiiLvvtcaeisIvl~Yf~LC~Edy~WwWRsF 558 (628)
T KOG1278|consen 514 N---------QFYY---MFGFL---FLVFIILVVTCAEISIVLTYFQLCAEDYNWWWRSF 558 (628)
T ss_pred h---------hHHH---HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhcccceeeeee
Confidence 0 1100 01111 22333445566677777777888999999876433
No 264
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=59.03 E-value=30 Score=42.14 Aligned_cols=63 Identities=19% Similarity=0.141 Sum_probs=43.4
Q ss_pred EEEEEcCC-CCCCCCCCCCCCCCc--CcHHHHHHHHHHHHhhCC---CCcEEEEEecHHHHHHHHHHHH
Q 000272 247 FPVVMNPR-GCGGSPLTTSRLFTA--ADSDDICTAIQFIGKARP---WTTLMSVGWGYGANMLTKYLAE 309 (1744)
Q Consensus 247 rVVVfD~R-GhGgSpltsprly~a--g~tdDL~aaId~LrkryP---~spIvLVGhSMGG~IaL~YLae 309 (1744)
.++-+|.| |.|-|-...+..+.. ...+|+..+|...-+++| ..++++.|.|+||..+-..+.+
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~ 71 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQE 71 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHH
Confidence 57788988 888884433322221 223788888877666776 4689999999999877655544
No 265
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=58.54 E-value=6.4e+02 Score=35.08 Aligned_cols=19 Identities=11% Similarity=-0.076 Sum_probs=15.5
Q ss_pred CCcchHHHHHHHHHHHHHH
Q 000272 1645 RSPQAIPGLWLLSLALAGV 1663 (1744)
Q Consensus 1645 lsl~~~i~lfLlGLvLa~a 1663 (1744)
+....|+..|++|+++++.
T Consensus 262 LggSGfLAVFVAGl~~gn~ 280 (810)
T TIGR00844 262 LGVDDLLVSFFAGTAFAWD 280 (810)
T ss_pred hccccHHHHHHHHHHHhcc
Confidence 3457799999999999874
No 266
>TIGR02921 PEP_integral PEP-CTERM family integral membrane protein. Members of this protein family, found in three different species so far, have a PEP-CTERM sequence at the carboxyl-terminus (see model TIGR02595), but are unusual among PEP-CTERM proteins in having multiple predicted transmembrane segments. The function is unknown. It is proposed that a member of the EpsH family, to be designated exosortase (see TIGR02602), recognizes and cleaves PEP-CTERM proteins in a manner analogous to the cleavage of LPXTG proteins by sortase (see Haft, et al., 2006).
Probab=57.75 E-value=1.3e+02 Score=39.59 Aligned_cols=71 Identities=17% Similarity=0.119 Sum_probs=33.0
Q ss_pred HhhHHHHHhhcCC---ch--hhHHHHHHHhHhcCCcch---HHHHHHHHHHHHHHHHhcCCcchHHHHHHhHHhhhhhe
Q 000272 1617 SWLPEEIAADLDY---HR--GIIISGLAFALSQRSPQA---IPGLWLLSLALAGVRQRSQGSLSVPIGLRTGIMASSFV 1687 (1744)
Q Consensus 1617 G~L~~~L~~~~g~---~~--AIIISSLLFALlHlsl~~---~i~lfLlGLvLa~aylrttGSLWlpIGLHagWn~~~~~ 1687 (1744)
|.|+.....|+.. |. .+...-++||+...-+.. ++....+=.++..+..+.-|-||--|.+|.+.+.+.|+
T Consensus 123 ~~l~~g~~sr~~~glqw~~l~~~~~ml~~giy~~~~l~~~~ip~~~gff~l~~~i~~~~~~~i~nyil~~~a~i~glfi 201 (952)
T TIGR02921 123 ACLFGGVASRFKIGLQWLQLLAAMLMLLFGIYAAALLAFFAIPAAAGFFELLEEIEFEHLGDIFNYILFHTAFICGLFI 201 (952)
T ss_pred HHHhhcchhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444443 43 233445677776542211 11111111223333333345678778888776655443
No 267
>PLN02436 cellulose synthase A
Probab=56.91 E-value=1.5e+02 Score=41.80 Aligned_cols=21 Identities=19% Similarity=0.510 Sum_probs=12.8
Q ss_pred HHHHHhhccccccchhHHHHH
Q 000272 1431 KLALLWGGLRGAMSLTEKLIL 1451 (1744)
Q Consensus 1431 ~~~~~~~~~~~~~slt~~~~~ 1451 (1744)
|--=||+|+++-++|-.||.-
T Consensus 848 r~nPl~~g~~~~L~l~QRL~Y 868 (1094)
T PLN02436 848 RHCPIWYGYGGGLKWLERFSY 868 (1094)
T ss_pred cCCcchhcccccCCHHHHHHH
Confidence 334457777656777766543
No 268
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=55.74 E-value=77 Score=40.82 Aligned_cols=134 Identities=18% Similarity=0.166 Sum_probs=75.9
Q ss_pred EEEEEEcC--CCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHhCC-c-----------------
Q 000272 187 QRVCVNTE--DGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRG-F----------------- 246 (1744)
Q Consensus 187 eRe~L~t~--DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~~G-Y----------------- 246 (1744)
..-++... +|..+.+ |+...+ .....+|.||.|-|++|+|.-. -.+.+.| |
T Consensus 45 ysGYv~v~~~~~~~LFY-wf~eS~--~~P~~dPlvLWLnGGPGCSSl~------G~~~E~GPf~v~~~G~tL~~N~ySWn 115 (454)
T KOG1282|consen 45 YSGYVTVNESEGRQLFY-WFFESE--NNPETDPLVLWLNGGPGCSSLG------GLFEENGPFRVKYNGKTLYLNPYSWN 115 (454)
T ss_pred ccceEECCCCCCceEEE-EEEEcc--CCCCCCCEEEEeCCCCCccchh------hhhhhcCCeEEcCCCCcceeCCcccc
Confidence 34467776 4667766 544321 2334579999999998765422 2233334 2
Q ss_pred ---EEEEEcCC-CCCCCCCCCCCCCCcC---cHHHHHHHHHHHHhhCC---CCcEEEEEecHHHHHHHHHHHHh--CC--
Q 000272 247 ---FPVVMNPR-GCGGSPLTTSRLFTAA---DSDDICTAIQFIGKARP---WTTLMSVGWGYGANMLTKYLAEV--GE-- 312 (1744)
Q Consensus 247 ---rVVVfD~R-GhGgSpltsprly~ag---~tdDL~aaId~LrkryP---~spIvLVGhSMGG~IaL~YLae~--ge-- 312 (1744)
.++-+|.| |.|-|--.++..+..+ ...|...+|...-+++| ..++++.|.|++|..+-..+.+- +.
T Consensus 116 k~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~ 195 (454)
T KOG1282|consen 116 KEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKK 195 (454)
T ss_pred ccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhcccc
Confidence 24444544 6666643333333222 24677777665445666 56899999999997765555441 11
Q ss_pred ----CCCceEEEEecCCCChh
Q 000272 313 ----RTPLTAVTCIDNPFDLE 329 (1744)
Q Consensus 313 ----~s~L~AaVlISpP~Dl~ 329 (1744)
...++|.++-.+..|..
T Consensus 196 ~~~~~iNLkG~~IGNg~td~~ 216 (454)
T KOG1282|consen 196 CCKPNINLKGYAIGNGLTDPE 216 (454)
T ss_pred ccCCcccceEEEecCcccCcc
Confidence 13477665544433443
No 269
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=54.56 E-value=2.4e+02 Score=35.10 Aligned_cols=38 Identities=32% Similarity=0.414 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHhhHHHHHhhcCCchhhHHHHHHHhHhcC
Q 000272 1607 VVLVEELLFRSWLPEEIAADLDYHRGIIISGLAFALSQR 1645 (1744)
Q Consensus 1607 v~l~EELLFRG~L~~~L~~~~g~~~AIIISSLLFALlHl 1645 (1744)
.-+.||.+++..=...+-...|.+ +.+++.+.++++|.
T Consensus 183 ~nV~~E~~v~~~~~~~~lg~~Glf-g~ii~~iq~~ile~ 220 (334)
T PF06027_consen 183 SNVLEEKLVKKAPRVEFLGMLGLF-GFIISGIQLAILER 220 (334)
T ss_pred HHHHHHHhcccCCHHHHHHHHHHH-HHHHHHHHHHheeh
Confidence 357799999987666665566654 66678889999998
No 270
>KOG1419 consensus Voltage-gated K+ channel KCNQ [Inorganic ion transport and metabolism]
Probab=54.54 E-value=20 Score=46.16 Aligned_cols=72 Identities=10% Similarity=0.088 Sum_probs=36.3
Q ss_pred HhhcCCchhhHHHHHHHhHhcC-----C-cchHHHHHHHHHHHHHHHHhc----CCcchHHHHHHhHHhhhhheeecccc
Q 000272 1624 AADLDYHRGIIISGLAFALSQR-----S-PQAIPGLWLLSLALAGVRQRS----QGSLSVPIGLRTGIMASSFVLQKGGL 1693 (1744)
Q Consensus 1624 ~~~~g~~~AIIISSLLFALlHl-----s-l~~~i~lfLlGLvLa~aylrt----tGSLWlpIGLHagWn~~~~~l~vgGL 1693 (1744)
-++.|.| =++.|++|+ |. + +..|+.+++. -+|.|+.++. .+|--.+--.|+.|...+.+..
T Consensus 213 DRrggTW--KLLGSvV~a--H~~ELiTt~YIGFL~LIfs-SflVYLaEKd~~~e~~n~~F~TyADALWWG~ITltT---- 283 (654)
T KOG1419|consen 213 DRRGGTW--KLLGSVVYA--HSKELITTWYIGFLVLIFS-SFLVYLAEKDAQGEGTNDEFPTYADALWWGVITLTT---- 283 (654)
T ss_pred hccCchh--hhhhhhhhh--hHHHHHHHHHHHHHHHHHH-HHHHHHhhcccccccccccchhHHHHHHhhheeEEe----
Confidence 3455556 355667764 65 1 1222222222 2445555663 1456777778887765554333
Q ss_pred eeecCCCC-cee
Q 000272 1694 LTYKPSLP-LWI 1704 (1744)
Q Consensus 1694 l~~~~~gp-~WL 1704 (1744)
+.|-...| .|+
T Consensus 284 IGYGDk~P~TWl 295 (654)
T KOG1419|consen 284 IGYGDKTPQTWL 295 (654)
T ss_pred eccCCcCcccch
Confidence 33444433 564
No 271
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=53.93 E-value=62 Score=37.80 Aligned_cols=84 Identities=14% Similarity=0.119 Sum_probs=46.4
Q ss_pred CcEEEEEcCCCC-CCCCCCCCCCCCcCcHHHHHHHHHHHHhhC-CCCcEEEEEecHHHHHHHHHHHHhCCC----CCceE
Q 000272 245 GFFPVVMNPRGC-GGSPLTTSRLFTAADSDDICTAIQFIGKAR-PWTTLMSVGWGYGANMLTKYLAEVGER----TPLTA 318 (1744)
Q Consensus 245 GYrVVVfD~RGh-GgSpltsprly~ag~tdDL~aaId~Lrkry-P~spIvLVGhSMGG~IaL~YLae~ge~----s~L~A 318 (1744)
||.+..++++.. +--.......|...-.+=...+.+.++... +..+++++|+|.|+.++..++.+.... .....
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 678888888862 110000111222221222222223333322 557899999999999999888775431 12345
Q ss_pred EEEecCCCCh
Q 000272 319 VTCIDNPFDL 328 (1744)
Q Consensus 319 aVlISpP~Dl 328 (1744)
.|+++.|-..
T Consensus 82 fVl~gnP~rp 91 (225)
T PF08237_consen 82 FVLIGNPRRP 91 (225)
T ss_pred EEEecCCCCC
Confidence 7778777544
No 272
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=53.55 E-value=34 Score=44.04 Aligned_cols=96 Identities=16% Similarity=0.197 Sum_probs=56.9
Q ss_pred cCCCcEEEEEcCCCCCchhHHHHHHH---HHHHhCC---------------cEEEEEc-CCCCCCCCC--CCCCCCCcCc
Q 000272 213 HGLDTTLLLVPGTAEGSIEKRIRLFV---CEALRRG---------------FFPVVMN-PRGCGGSPL--TTSRLFTAAD 271 (1744)
Q Consensus 213 ~g~~P~VVLLHGltGGS~~sYIr~La---~~La~~G---------------YrVVVfD-~RGhGgSpl--tsprly~ag~ 271 (1744)
..++|.++.+-|++|+|. .+. .|. ..-...| =.+|.+| .-|.|-|.. .....-....
T Consensus 98 p~~rPvi~wlNGGPGcSS-~~g-~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~ 175 (498)
T COG2939 98 PANRPVIFWLNGGPGCSS-VTG-LLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGA 175 (498)
T ss_pred CCCCceEEEecCCCChHh-hhh-hhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhcc
Confidence 346899999999876543 221 111 0000111 2466677 557776642 1111111223
Q ss_pred HHHHHHHHHHHHhhCC-----CCcEEEEEecHHHHHHHHHHHHh
Q 000272 272 SDDICTAIQFIGKARP-----WTTLMSVGWGYGANMLTKYLAEV 310 (1744)
Q Consensus 272 tdDL~aaId~LrkryP-----~spIvLVGhSMGG~IaL~YLae~ 310 (1744)
-.|+..+.+.+...+| ..+++++|.|+||.-+-.+|.+-
T Consensus 176 ~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L 219 (498)
T COG2939 176 GKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHEL 219 (498)
T ss_pred chhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHH
Confidence 4688888887766544 24899999999999887777654
No 273
>PRK09928 choline transport protein BetT; Provisional
Probab=52.95 E-value=33 Score=45.95 Aligned_cols=47 Identities=15% Similarity=0.089 Sum_probs=36.4
Q ss_pred hhhHHHHHHHhHhcCCcchHHHHHHHHHHHHHHHHhcCCcchHHHHH
Q 000272 1631 RGIIISGLAFALSQRSPQAIPGLWLLSLALAGVRQRSQGSLSVPIGL 1677 (1744)
Q Consensus 1631 ~AIIISSLLFALlHlsl~~~i~lfLlGLvLa~aylrttGSLWlpIGL 1677 (1744)
....-.|+.++++|.++..+..+.++|+.+||..+|..-.+-+.-.+
T Consensus 134 ~eAa~~Am~~t~FHWG~~aWAiYalvglalAYf~yr~~~pl~issal 180 (679)
T PRK09928 134 IEAARQAMVWTLFHYGLTGWSMYALMGMALGYFSYRYNLPLTIRSAL 180 (679)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCCchhHhh
Confidence 34566799999999999999999999999999988744444433333
No 274
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=52.39 E-value=1.2e+02 Score=39.29 Aligned_cols=26 Identities=27% Similarity=0.516 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhccC
Q 000272 1466 GFVGMVLVLWSPVLVPLLPTIVQSWT 1491 (1744)
Q Consensus 1466 lFllmllllwlPvaI~llp~Ll~~~~ 1491 (1744)
..++.++.++.|++++++|.++..|.
T Consensus 97 ~~~L~l~aflSPiaflvLP~il~~~~ 122 (505)
T PF06638_consen 97 ASILGLLAFLSPIAFLVLPKILWRWQ 122 (505)
T ss_pred HHHHHHHHHHhhHHHHHhcccccCcc
Confidence 34556667788999988887655554
No 275
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=51.29 E-value=26 Score=43.41 Aligned_cols=43 Identities=23% Similarity=0.302 Sum_probs=33.4
Q ss_pred CCCcEEEEEecHHHHHHHHHHHHhCCC---CCceEEEEecCCCChh
Q 000272 287 PWTTLMSVGWGYGANMLTKYLAEVGER---TPLTAVTCIDNPFDLE 329 (1744)
Q Consensus 287 P~spIvLVGhSMGG~IaL~YLae~ge~---s~L~AaVlISpP~Dl~ 329 (1744)
+..|+.+||||||+-++..++-+-.++ ..|..+++++.|....
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 567899999999999988777664433 3378899999887654
No 276
>PRK01637 hypothetical protein; Reviewed
Probab=50.66 E-value=5.2e+02 Score=31.11 Aligned_cols=37 Identities=19% Similarity=0.140 Sum_probs=23.1
Q ss_pred hhhHHHHHhhccccccchhHHHHHHHH-hh-cCchhHHHH
Q 000272 1428 LVGKLALLWGGLRGAMSLTEKLILFLH-LA-DRPLLQRIL 1465 (1744)
Q Consensus 1428 ~~~~~~~~~~~~~~~~slt~~~~~~~~-~~-~~P~~~rIl 1465 (1744)
++|=+.++|+++++..++-. =++... .. +++.+.++.
T Consensus 95 ~~g~~~ll~sa~~~~~~l~~-a~N~i~~~~~~R~~~~~~~ 133 (286)
T PRK01637 95 AVGICGLIVVALMLISSIDK-ALNTIWRSKRKRPKVYSFA 133 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHhCCCCCCcHHHHHH
Confidence 47888899999988666543 334333 22 356666554
No 277
>PRK10921 twin-arginine protein translocation system subunit TatC; Provisional
Probab=50.19 E-value=5.3e+02 Score=31.01 Aligned_cols=69 Identities=9% Similarity=0.015 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHH-HhhHHHHHhhcCCchhhHHHHHHHhHhcCCcchHHHHHHHHHHHHHHHHhcCCcchHH
Q 000272 1600 GIVTATVVVLVEELLFR-SWLPEEIAADLDYHRGIIISGLAFALSQRSPQAIPGLWLLSLALAGVRQRSQGSLSVP 1674 (1744)
Q Consensus 1600 ~lllallv~l~EELLFR-G~L~~~L~~~~g~~~AIIISSLLFALlHlsl~~~i~lfLlGLvLa~aylrttGSLWlp 1674 (1744)
++.+++-.|+.==++.| |.+....-+++ |.-+++..+++|.+-.. +-.+..+++++-+..+|+- ++|.+
T Consensus 164 ~fGl~FelPli~~~L~~~giv~~~~l~~~--Rr~~~v~~~iiaAiiTP-pD~isq~llaiPl~lLYEi---sI~i~ 233 (258)
T PRK10921 164 AFGVSFEVPVAIVLLCWMGVTTPEDLRKK--RPYVLVGAFVVGMLLTP-PDVFSQTLLAIPMYCLFEI---GVFFS 233 (258)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHhc--CcHHhHHHHHHHHHcCC-CcHHHHHHHHHHHHHHHHH---HHHHH
Confidence 34444444655555555 44444333332 22233345666666544 6777778888888888876 35544
No 278
>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes. ; GO: 0016021 integral to membrane
Probab=50.09 E-value=70 Score=43.28 Aligned_cols=35 Identities=20% Similarity=0.117 Sum_probs=23.1
Q ss_pred hhhhhHHHHHhhccccccchhHHHHHHHHhhcCchhHHH
Q 000272 1426 LKLVGKLALLWGGLRGAMSLTEKLILFLHLADRPLLQRI 1464 (1744)
Q Consensus 1426 ~~~~~~~~~~~~~~~~~~slt~~~~~~~~~~~~P~~~rI 1464 (1744)
--+..|+.++|+-+--|=-+|+=.|-| =||+|+-|
T Consensus 27 ~~~~~~~~~~w~~~~~~d~~~~~r~e~----~~p~wl~~ 61 (697)
T PF09726_consen 27 TFLYVKFLLVWALVLLADFMLEFRFEY----LWPFWLLL 61 (697)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHH----HHHHHHHH
Confidence 357789999998765444444444444 47888754
No 279
>PRK05771 V-type ATP synthase subunit I; Validated
Probab=49.76 E-value=3.9e+02 Score=35.89 Aligned_cols=44 Identities=30% Similarity=0.359 Sum_probs=30.6
Q ss_pred cchhhHHHHHhhhcccCCccccCCCCcchHHHHHH---------HHHhhcccCcchhhh
Q 000272 1380 QDNIVTSLAEKAMSVASPVVPTKEDGEVDQERLVA---------MLADLGQKGGLLKLV 1429 (1744)
Q Consensus 1380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~ 1429 (1744)
.||=.+.--|-=+..=|. -.=+|+|.--++| |++|.|| |++=+.
T Consensus 321 ~N~~~~~pFE~lv~mYg~----P~Y~EiDPT~~~ai~f~lfFGmM~gD~Gy--GLil~l 373 (646)
T PRK05771 321 KNPKFIKPFESLTEMYSL----PKYNEIDPTPFLAIFFPLFFGMMLGDAGY--GLLLLL 373 (646)
T ss_pred eCCchhhhHHHHHHHcCC----CCCCCcCCccHHHHHHHHHHHHHHHhHHH--HHHHHH
Confidence 555555555555554443 4568999999998 7999999 666555
No 280
>PRK11465 putative mechanosensitive channel protein; Provisional
Probab=48.30 E-value=9.3e+02 Score=33.33 Aligned_cols=73 Identities=14% Similarity=0.086 Sum_probs=43.8
Q ss_pred CcchHHHHHHHHHhhcccCcchhhhhHHHHHhhccccccchhHHHHHHH---Hhh-cCchhHHHHHHHHHHHHHHHHHHH
Q 000272 1405 GEVDQERLVAMLADLGQKGGLLKLVGKLALLWGGLRGAMSLTEKLILFL---HLA-DRPLLQRILGFVGMVLVLWSPVLV 1480 (1744)
Q Consensus 1405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~slt~~~~~~~---~~~-~~P~~~rIllFllmllllwlPvaI 1480 (1744)
..+|+.++-..+.+|+ +-.+.-++.+|..=|-|-.|=.| |..- ... +.+...+.+++++.+++=.+|+++
T Consensus 127 ~~~~~~~~~~a~~~~~-----~~~~~~~~~~~~~r~~~~~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~v~~ 200 (741)
T PRK11465 127 KPFNPQTFSNALTHFL-----MLAVLVFGFYWLIRLCALPLYRK-MGQWARQKNRERSNWLQLPAMIIGAFIIDLLLLAL 200 (741)
T ss_pred CCcCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999886 44556666666544444444333 3321 223 334444445667777666777776
Q ss_pred hhh
Q 000272 1481 PLL 1483 (1744)
Q Consensus 1481 ~ll 1483 (1744)
...
T Consensus 201 ~~~ 203 (741)
T PRK11465 201 TLF 203 (741)
T ss_pred HHH
Confidence 443
No 281
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=48.20 E-value=3.3e+02 Score=35.78 Aligned_cols=44 Identities=25% Similarity=0.271 Sum_probs=23.2
Q ss_pred HhhHHHHHhhcCCchhhHHHHHHHhHhcC-------CcchHHHHHHHHHHH
Q 000272 1617 SWLPEEIAADLDYHRGIIISGLAFALSQR-------SPQAIPGLWLLSLAL 1660 (1744)
Q Consensus 1617 G~L~~~L~~~~g~~~AIIISSLLFALlHl-------sl~~~i~lfLlGLvL 1660 (1744)
+++...++++.+...-+.+++++||+.-+ .+..++.+++.|+..
T Consensus 271 al~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~ 321 (524)
T PF05977_consen 271 ALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAW 321 (524)
T ss_pred HHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 55566666666655445555555555443 223344555555443
No 282
>PRK14013 hypothetical protein; Provisional
Probab=48.03 E-value=4.6e+02 Score=32.83 Aligned_cols=46 Identities=17% Similarity=0.089 Sum_probs=25.5
Q ss_pred hhHHHHHHHHHHHH------HHHHHHHhhheecccCCcccccccccCchhHHHHH
Q 000272 1498 IAEFACIVGLYIAV------MILTMKWGRRVRGYENSLEQYGLDITSLPKVQNFL 1546 (1744)
Q Consensus 1498 i~~l~~lvgLyla~------lILl~lW~~r~~~~~~pl~slGL~~~~~~~~r~ll 1546 (1744)
.+.....+|+.+|+ +.+++.|... ...|++.+.+....+....+.+
T Consensus 61 wq~~fl~~Gi~iAvFgmRlvfp~~iv~i~a---~~~p~~~~~~a~s~~~~Y~~~l 112 (338)
T PRK14013 61 WQKRFLTWGILIAVFGMRLVFPLLIVAVAA---GLGPIEALKLALNDPDEYAEIL 112 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCChHHHHHHHcCCchhHHHHH
Confidence 34445556665554 3346667765 3356888777765534333333
No 283
>COG1377 FlhB Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=45.79 E-value=2.5e+02 Score=35.40 Aligned_cols=74 Identities=31% Similarity=0.420 Sum_probs=40.2
Q ss_pred CCCCcchHHHHHHHHHhhcccCcchhhhhHHHHHhhc---cccccchhHHHHHHH---HhhcCchhHHHHHHHHHHHHHH
Q 000272 1402 KEDGEVDQERLVAMLADLGQKGGLLKLVGKLALLWGG---LRGAMSLTEKLILFL---HLADRPLLQRILGFVGMVLVLW 1475 (1744)
Q Consensus 1402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~slt~~~~~~~---~~~~~P~~~rIllFllmllllw 1475 (1744)
++.|.|-.-|=+.+++-| ++|=+.|+|.| .++.|++=...+.+- .+....++.-+..+++-++...
T Consensus 22 rekG~v~kS~el~~a~~l--------l~g~~~l~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 93 (363)
T COG1377 22 REKGQVPKSRELTSAASL--------LVGFLLLFFFGSYFARRLSGFLRAFLEFPESMDLDDESALELIKALLLEILKAL 93 (363)
T ss_pred HHcCCCccchhHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHHH
Confidence 567888888877777654 67788888887 233333333333332 1222223333444444455555
Q ss_pred HHHHHhhh
Q 000272 1476 SPVLVPLL 1483 (1744)
Q Consensus 1476 lPvaI~ll 1483 (1744)
+|+.+.+.
T Consensus 94 lp~~~~~~ 101 (363)
T COG1377 94 LPFLLVLL 101 (363)
T ss_pred HHHHHHHH
Confidence 55555444
No 284
>PRK12405 electron transport complex RsxE subunit; Provisional
Probab=45.78 E-value=2.6e+02 Score=33.21 Aligned_cols=34 Identities=21% Similarity=0.355 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHhhcCCchhhHH
Q 000272 1600 GIVTATVVVLVEELLFRSWLPEEIAADLDYHRGIII 1635 (1744)
Q Consensus 1600 ~lllallv~l~EELLFRG~L~~~L~~~~g~~~AIII 1635 (1744)
+++++.++-+.| ++.+.|... +.+.+|.+..+++
T Consensus 73 IlvIA~~V~~v~-~~L~a~~p~-l~~~LGiflpLIv 106 (231)
T PRK12405 73 VMIIASFVTVVQ-LLMNAYAYG-LYQSLGIFIPLIV 106 (231)
T ss_pred HHHHHHHHHHHH-HHHHHHHHH-HHHHhhhhhhHHH
Confidence 444555555554 888888764 4677787665555
No 285
>PRK09776 putative diguanylate cyclase; Provisional
Probab=45.70 E-value=5.6e+02 Score=35.99 Aligned_cols=10 Identities=40% Similarity=0.806 Sum_probs=5.8
Q ss_pred hhhhHHHHHh
Q 000272 1427 KLVGKLALLW 1436 (1744)
Q Consensus 1427 ~~~~~~~~~~ 1436 (1744)
|..|-++++|
T Consensus 19 ~~~~~~~~iW 28 (1092)
T PRK09776 19 RFPTTLAPLW 28 (1092)
T ss_pred cCCCCccccc
Confidence 4455566666
No 286
>PLN02400 cellulose synthase
Probab=45.39 E-value=3.1e+02 Score=38.89 Aligned_cols=15 Identities=40% Similarity=0.928 Sum_probs=6.7
Q ss_pred HhhccccccchhHHH
Q 000272 1435 LWGGLRGAMSLTEKL 1449 (1744)
Q Consensus 1435 ~~~~~~~~~slt~~~ 1449 (1744)
||.|.++-++|-.||
T Consensus 841 l~~G~~~~L~l~QRL 855 (1085)
T PLN02400 841 IWYGYNGRLKLLERL 855 (1085)
T ss_pred cccccCCCCCHHHHH
Confidence 344443335554444
No 287
>PRK03612 spermidine synthase; Provisional
Probab=44.80 E-value=8.7e+02 Score=31.99 Aligned_cols=48 Identities=23% Similarity=0.280 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh---HHHHHhhcC-CchhhHHHHHHHhHhcC
Q 000272 1598 CQGIVTATVVVLVEELLFRSWL---PEEIAADLD-YHRGIIISGLAFALSQR 1645 (1744)
Q Consensus 1598 l~~lllallv~l~EELLFRG~L---~~~L~~~~g-~~~AIIISSLLFALlHl 1645 (1744)
+++++++...|+.--++-|..- -+.+.+-+. -..+.++.+++++++=+
T Consensus 119 ~~~~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 119 LIGLLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 3455556666766665544221 122223222 24577777888777654
No 288
>PRK11462 putative transporter; Provisional
Probab=44.70 E-value=6.9e+02 Score=31.88 Aligned_cols=12 Identities=17% Similarity=0.066 Sum_probs=6.5
Q ss_pred HhhccCccchhh
Q 000272 1728 ILYPRQPLLSKK 1739 (1744)
Q Consensus 1728 il~~~k~l~~k~ 1739 (1744)
+++++.||++|+
T Consensus 423 ~~~~~y~l~~~~ 434 (460)
T PRK11462 423 IAKRYYSLTTHN 434 (460)
T ss_pred HHHHhccCCHHH
Confidence 333456776654
No 289
>PRK10429 melibiose:sodium symporter; Provisional
Probab=43.93 E-value=7.9e+02 Score=31.25 Aligned_cols=10 Identities=10% Similarity=0.059 Sum_probs=5.6
Q ss_pred hhccCccchh
Q 000272 1729 LYPRQPLLSK 1738 (1744)
Q Consensus 1729 l~~~k~l~~k 1738 (1744)
++++.|++++
T Consensus 429 ~~~~y~l~~~ 438 (473)
T PRK10429 429 YFRYYRLNGD 438 (473)
T ss_pred HHHheeCCHH
Confidence 3346677655
No 290
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=43.77 E-value=83 Score=38.71 Aligned_cols=94 Identities=17% Similarity=0.218 Sum_probs=60.9
Q ss_pred CcEEEEEcCCCCC--chh-HHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCC-------------CCCCCCcCcHHHHHHH
Q 000272 216 DTTLLLVPGTAEG--SIE-KRIRLFVCEALR-RGFFPVVMNPRGCGGSPLT-------------TSRLFTAADSDDICTA 278 (1744)
Q Consensus 216 ~P~VVLLHGltGG--S~~-sYIr~La~~La~-~GYrVVVfD~RGhGgSplt-------------sprly~ag~tdDL~aa 278 (1744)
+..|+++-|...- ... ..+-.+...+.+ .|-++++|=..|.|--... ....|..+....++.+
T Consensus 31 k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~A 110 (423)
T COG3673 31 KRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREA 110 (423)
T ss_pred ceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHH
Confidence 4567777774211 111 135455555655 7899999999998744111 0113334455778888
Q ss_pred HHHHHhhC-CCCcEEEEEecHHHHHHHHHHHH
Q 000272 279 IQFIGKAR-PWTTLMSVGWGYGANMLTKYLAE 309 (1744)
Q Consensus 279 Id~Lrkry-P~spIvLVGhSMGG~IaL~YLae 309 (1744)
-.++...| |..+|+++|||-|+.++--+|+-
T Consensus 111 YrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 111 YRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 88887776 67899999999999877666554
No 291
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=43.46 E-value=4e+02 Score=28.10 Aligned_cols=26 Identities=23% Similarity=0.635 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc
Q 000272 1543 QNFLKGLIAGVMLVLLIQSLNAVLGC 1568 (1744)
Q Consensus 1543 r~ll~GLllGvlli~lv~li~~llG~ 1568 (1744)
|.|++|++.|++.+++++++.++...
T Consensus 65 kG~l~G~~~Gl~y~~il~lis~~~~~ 90 (116)
T PF12670_consen 65 KGWLHGLLVGLLYFLILLLISFLFGP 90 (116)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 56889999999998888877776543
No 292
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=42.15 E-value=18 Score=45.51 Aligned_cols=106 Identities=17% Similarity=0.069 Sum_probs=75.6
Q ss_pred CCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCCCc----CcHHHHHHHHHHHHhhCCCCc
Q 000272 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTA----ADSDDICTAIQFIGKARPWTT 290 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSpltsprly~a----g~tdDL~aaId~LrkryP~sp 290 (1744)
++|+|+..-|. +-+...+...+... + +-.-+.+.||=+|.|... |..|.. ...+|.+.+++.++.-|+ .+
T Consensus 62 drPtV~~T~GY-~~~~~p~r~Ept~L-l--d~NQl~vEhRfF~~SrP~-p~DW~~Lti~QAA~D~Hri~~A~K~iY~-~k 135 (448)
T PF05576_consen 62 DRPTVLYTEGY-NVSTSPRRSEPTQL-L--DGNQLSVEHRFFGPSRPE-PADWSYLTIWQAASDQHRIVQAFKPIYP-GK 135 (448)
T ss_pred CCCeEEEecCc-ccccCccccchhHh-h--ccceEEEEEeeccCCCCC-CCCcccccHhHhhHHHHHHHHHHHhhcc-CC
Confidence 57899999986 33333332223222 2 235577899999988432 233322 335899999999999997 47
Q ss_pred EEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCCh
Q 000272 291 LMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDL 328 (1744)
Q Consensus 291 IvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl 328 (1744)
.+.-|.|=||+.++.|=.-+|+ .+.+.|...+|.+.
T Consensus 136 WISTG~SKGGmTa~y~rrFyP~--DVD~tVaYVAP~~~ 171 (448)
T PF05576_consen 136 WISTGGSKGGMTAVYYRRFYPD--DVDGTVAYVAPNDV 171 (448)
T ss_pred ceecCcCCCceeEEEEeeeCCC--CCCeeeeeeccccc
Confidence 9999999999998877666776 58899998888875
No 293
>PRK02975 putative common antigen polymerase; Provisional
Probab=41.67 E-value=5.4e+02 Score=32.46 Aligned_cols=40 Identities=15% Similarity=0.086 Sum_probs=26.3
Q ss_pred hcCCchhhHHHHHHHhHhcCCc---------chHHHHHHHHHHHHHHHH
Q 000272 1626 DLDYHRGIIISGLAFALSQRSP---------QAIPGLWLLSLALAGVRQ 1665 (1744)
Q Consensus 1626 ~~g~~~AIIISSLLFALlHlsl---------~~~i~lfLlGLvLa~ayl 1665 (1744)
....|..-+++++.||+++.-. .++...+++|+.-+|+-.
T Consensus 178 tk~~Wl~fL~~tv~FG~ltYviVGGTRANiiiAf~lFlfiGi~rgwisl 226 (450)
T PRK02975 178 DSKAWLFFLVSTVAFGLLTYMIVGGTRANIIIAFALFLFIGIIRGWISL 226 (450)
T ss_pred cHHHHHHHHHHHHHHhcEEEEEEcCcHHHHHHHHHHHHHHHHHHhHHHH
Confidence 3346899999999999999721 233334456666666543
No 294
>TIGR00353 nrfE c-type cytochrome biogenesis protein CcmF. The product of this gene is required for the biogenesis of C-type cytochromes. This gene is thought to have eleven transmembrane helices. Disruption of this gene in Paracoccus denitrificans, encoding a putative transporter, results in formation of an unstable apocytochrome c and deficiency in siderophore production.
Probab=41.58 E-value=8.8e+02 Score=32.60 Aligned_cols=15 Identities=13% Similarity=-0.111 Sum_probs=11.8
Q ss_pred CcchHHHHHHhHHhh
Q 000272 1669 GSLSVPIGLRTGIMA 1683 (1744)
Q Consensus 1669 GSLWlpIGLHagWn~ 1683 (1744)
.+.|.....|.|.-.
T Consensus 424 ~~~~g~~laH~Gval 438 (576)
T TIGR00353 424 RSQWGMLLAHLGVAL 438 (576)
T ss_pred hhhhhhhhhHHHHHH
Confidence 368999999998643
No 295
>KOG3533 consensus Inositol 1,4,5-trisphosphate receptor [Signal transduction mechanisms]
Probab=40.46 E-value=2.6e+02 Score=40.07 Aligned_cols=19 Identities=11% Similarity=0.384 Sum_probs=12.2
Q ss_pred HHHHHHHHHHhhcccCCCC
Q 000272 467 LVIEWLSAVELGLLKGRHP 485 (1744)
Q Consensus 467 ~VlEFL~av~~~llkg~~p 485 (1744)
...+|.+.+..++.....|
T Consensus 856 ~tm~fVE~YL~~vv~q~~~ 874 (2706)
T KOG3533|consen 856 HTMAFVETYLMGVVNQSMP 874 (2706)
T ss_pred HHHHHHHHHHHHhhccccc
Confidence 3667777766666666555
No 296
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=40.25 E-value=8.8e+02 Score=31.04 Aligned_cols=13 Identities=23% Similarity=0.118 Sum_probs=6.4
Q ss_pred HHHHHHHHHHHHH
Q 000272 1650 IPGLWLLSLALAG 1662 (1744)
Q Consensus 1650 ~i~lfLlGLvLa~ 1662 (1744)
++..+++|+..+.
T Consensus 355 ~~~~~l~G~g~g~ 367 (495)
T PRK14995 355 WGLMALLGFSAAS 367 (495)
T ss_pred HHHHHHHHHhHHH
Confidence 3345555555444
No 297
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=39.91 E-value=3.2e+02 Score=37.08 Aligned_cols=15 Identities=33% Similarity=0.598 Sum_probs=11.3
Q ss_pred HHHHhhccccccchh
Q 000272 1432 LALLWGGLRGAMSLT 1446 (1744)
Q Consensus 1432 ~~~~~~~~~~~~slt 1446 (1744)
.++||||.+|-+.++
T Consensus 49 ~~~~~~~~~~~~~~~ 63 (711)
T TIGR00958 49 LGVLWLGALGILLNK 63 (711)
T ss_pred HHHHHHHHHHHHhhc
Confidence 478899888877655
No 298
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=39.80 E-value=1.3e+02 Score=36.03 Aligned_cols=92 Identities=17% Similarity=0.185 Sum_probs=54.1
Q ss_pred EEEEEcCCCCCchh----HHHHHHHHHH-HhCCcEEEEEcCCCCCCC--------CCC----CCCCCCcCcHHHHHHHHH
Q 000272 218 TLLLVPGTAEGSIE----KRIRLFVCEA-LRRGFFPVVMNPRGCGGS--------PLT----TSRLFTAADSDDICTAIQ 280 (1744)
Q Consensus 218 ~VVLLHGltGGS~~----sYIr~La~~L-a~~GYrVVVfD~RGhGgS--------plt----sprly~ag~tdDL~aaId 280 (1744)
.||++=|...+... ..+..+...+ ...+-..+++=..|.|-. ... ....+..+..+.+..+..
T Consensus 3 iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay~ 82 (277)
T PF09994_consen 3 IVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAYR 82 (277)
T ss_pred EEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHHH
Confidence 46666664222111 3355666555 333445556667777761 111 111222334577888888
Q ss_pred HHHhhC-CCCcEEEEEecHHHHHHHHHHHH
Q 000272 281 FIGKAR-PWTTLMSVGWGYGANMLTKYLAE 309 (1744)
Q Consensus 281 ~Lrkry-P~spIvLVGhSMGG~IaL~YLae 309 (1744)
++.+.| |..+|+++|||=|+.++-.++..
T Consensus 83 ~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 83 FLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 886665 56799999999999887666654
No 299
>COG4485 Predicted membrane protein [Function unknown]
Probab=38.83 E-value=9.5e+02 Score=32.95 Aligned_cols=50 Identities=18% Similarity=0.052 Sum_probs=25.0
Q ss_pred hhHHHHHHHhHh--cCC---cchHHHHHHHHHHHHHHHHhcCCcchHHHHHHhHHh
Q 000272 1632 GIIISGLAFALS--QRS---PQAIPGLWLLSLALAGVRQRSQGSLSVPIGLRTGIM 1682 (1744)
Q Consensus 1632 AIIISSLLFALl--Hls---l~~~i~lfLlGLvLa~aylrttGSLWlpIGLHagWn 1682 (1744)
+++|.+.+.-++ |-. ...++.++++++++.+.-++ ....|.+|.+-+...
T Consensus 386 ~vvil~~L~i~~~~~y~~~~~~~iiL~l~l~~iy~l~l~~-~~kk~i~~~v~~iiI 440 (858)
T COG4485 386 FVVILGFLYILLSPHYPFLPIVGIILLLLLLVIYKLSLWA-FKKKTISILVFIIII 440 (858)
T ss_pred HHHHHHHHHHHHccccchhhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 555555555333 211 23444455555544433333 224788887776553
No 300
>TIGR00400 mgtE Mg2+ transporter (mgtE). This family of prokaryotic proteins models a class of Mg++ transporter first described in Bacillus firmus. May form a homodimer.
Probab=38.49 E-value=9.4e+02 Score=31.00 Aligned_cols=78 Identities=13% Similarity=0.110 Sum_probs=41.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCccccchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000272 1540 PKVQNFLKGLIAGVMLVLLIQSLNAVLGCVSFSWPSIVTSSLTAMAWLKVYGNISMLACQGIVTATVVVLVEELLFRSWL 1619 (1744)
Q Consensus 1540 ~~~r~ll~GLllGvlli~lv~li~~llG~i~~~~~~~~~s~~~~~~ll~~~~~~~~lil~~lllallv~l~EELLFRG~L 1619 (1744)
..+|+++.|+++|+++.++..++.++.+. ... ... ... +.+++..++.+ +=|++
T Consensus 354 ~~~~e~~v~~~~g~~~g~~~~~~~~~~~~-----~~~-------~~~------~v~--~~~~~~~~~~~------~~G~~ 407 (449)
T TIGR00400 354 VILREICVSILVGAILASVNFLRIVFFQG-----KLL-------IAF------VVS--SSLFVSLTVAK------ILGGL 407 (449)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----Cch-------HHH------HHH--HHHHHHHHHHH------HHHHH
Confidence 45788888888887776666655544311 110 001 000 00111111122 34777
Q ss_pred HHHHHhhcCCchhhHHHHHHHhHh
Q 000272 1620 PEEIAADLDYHRGIIISGLAFALS 1643 (1744)
Q Consensus 1620 ~~~L~~~~g~~~AIIISSLLFALl 1643 (1744)
.+.+.+++|.=+|.+.+-++=++.
T Consensus 408 lp~~~~k~~~DPa~~s~p~itt~~ 431 (449)
T TIGR00400 408 LPIVAKLLKLDPALMSGPLITTIA 431 (449)
T ss_pred HHHHHHHcCCChhhhhhhHHHHHH
Confidence 888888998777766655554443
No 301
>COG1480 Predicted membrane-associated HD superfamily hydrolase [General function prediction only]
Probab=38.02 E-value=5.4e+02 Score=34.92 Aligned_cols=17 Identities=35% Similarity=0.483 Sum_probs=12.3
Q ss_pred HHHHhhhcccCCccccC
Q 000272 1386 SLAEKAMSVASPVVPTK 1402 (1744)
Q Consensus 1386 ~~~~~~~~~~~~~~~~~ 1402 (1744)
.++++|.+.-=||.=++
T Consensus 227 ~~~~ea~~~v~~V~I~~ 243 (700)
T COG1480 227 NLRQEALSKVEPVKISK 243 (700)
T ss_pred HHHHHHHhccCceEEec
Confidence 35677777777887776
No 302
>PF07787 DUF1625: Protein of unknown function (DUF1625); InterPro: IPR012430 Sequences making up this family are derived from hypothetical proteins expressed by both prokaryotic and eukaryotic species. The region in question is approximately 250 residues long.
Probab=37.24 E-value=1e+02 Score=36.38 Aligned_cols=48 Identities=19% Similarity=0.180 Sum_probs=25.3
Q ss_pred hHHHHHhhccccccchhHHHHHHHHhhcCch-hHHHHHHHHHHHHHHHHHHH
Q 000272 1430 GKLALLWGGLRGAMSLTEKLILFLHLADRPL-LQRILGFVGMVLVLWSPVLV 1480 (1744)
Q Consensus 1430 ~~~~~~~~~~~~~~slt~~~~~~~~~~~~P~-~~rIllFllmllllwlPvaI 1480 (1744)
++|.||.-|. +|..+=.-........-. .+|+++|++|++-+.+-+.+
T Consensus 156 ~~i~ll~~G~---~s~~e~f~~~~~~n~~~tW~lR~~G~llmf~G~~~~~~~ 204 (248)
T PF07787_consen 156 DKILLLEEGK---VSAEEMFAKEHSANNTLTWILRFIGWLLMFIGFFLLFSP 204 (248)
T ss_pred CEEEEEEcCC---cCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6677776655 554443322222222222 35888888887765444433
No 303
>PF02028 BCCT: BCCT family transporter; InterPro: IPR000060 These prokaryotic transport proteins belong to a family known as BCCT (for Betaine / Carnitine / Choline Transporters) and are specific for compounds containing a quaternary nitrogen atom. The BCCT proteins contain 12 transmembrane regions and are energized by proton symport. They contain a conserved region with four tryptophans in their central region [].; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 2WSX_B 3HFX_A 2WSW_A 4DOJ_B 2WIT_C 4AIN_A 3P03_B.
Probab=36.55 E-value=1.7e+02 Score=38.07 Aligned_cols=36 Identities=17% Similarity=0.024 Sum_probs=32.1
Q ss_pred hhHHHHHHHhHhcCCcchHHHHHHHHHHHHHHHHhc
Q 000272 1632 GIIISGLAFALSQRSPQAIPGLWLLSLALAGVRQRS 1667 (1744)
Q Consensus 1632 AIIISSLLFALlHlsl~~~i~lfLlGLvLa~aylrt 1667 (1744)
.....++-++++|.++..+..+.+.|+.++|++++.
T Consensus 118 ~A~~~A~~~~~fHWG~~~Wa~Y~~~~l~~ay~~y~k 153 (485)
T PF02028_consen 118 EAAEWAMAYSFFHWGFHAWAIYALVGLAIAYFFYNK 153 (485)
T ss_dssp HHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHheeeeec
Confidence 355889999999999999999999999999998873
No 304
>PRK09509 fieF ferrous iron efflux protein F; Reviewed
Probab=36.39 E-value=8.5e+02 Score=29.46 Aligned_cols=13 Identities=15% Similarity=0.273 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHHH
Q 000272 1544 NFLKGLIAGVMLV 1556 (1744)
Q Consensus 1544 ~ll~GLllGvlli 1556 (1744)
+.+.+++.|++++
T Consensus 79 E~l~~l~~~~~l~ 91 (299)
T PRK09509 79 ESLAALAQSMFIS 91 (299)
T ss_pred HHHHHHHHHHHHH
Confidence 4445555554443
No 305
>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system []. Some members of this family have been annotated as putative ABC transporter permease proteins.
Probab=36.24 E-value=1.3e+03 Score=31.97 Aligned_cols=25 Identities=32% Similarity=0.493 Sum_probs=12.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhh
Q 000272 1461 LQRILGFVGMVLVLWSPVLVPLLPT 1485 (1744)
Q Consensus 1461 ~~rIllFllmllllwlPvaI~llp~ 1485 (1744)
+.+++-|++..++..+--++.++|+
T Consensus 210 ~~~~~~~~~~~ilg~~lsa~~llP~ 234 (843)
T PF09586_consen 210 FKKILRFIGSSILGVGLSAFLLLPT 234 (843)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555555555444444445553
No 306
>PRK09950 putative transporter; Provisional
Probab=35.95 E-value=3.4e+02 Score=35.71 Aligned_cols=48 Identities=17% Similarity=0.092 Sum_probs=36.1
Q ss_pred hhhHHHHHHHhHhcCCcchHHHHHHHHHHHHH-HHHhcCCcchHHHHHH
Q 000272 1631 RGIIISGLAFALSQRSPQAIPGLWLLSLALAG-VRQRSQGSLSVPIGLR 1678 (1744)
Q Consensus 1631 ~AIIISSLLFALlHlsl~~~i~lfLlGLvLa~-aylrttGSLWlpIGLH 1678 (1744)
....--|+-++++|.++..+..+.+.|+.+|| .+.|.+..+-++-.++
T Consensus 126 ~~A~~~A~~~t~fHWG~~aWaiY~l~~l~iaY~~~~rk~~pl~iss~~~ 174 (506)
T PRK09950 126 PKALEYSVSYSFFHWGISAWATYALASLIMAYHFHVRKNKGLSLSGIIA 174 (506)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhcCCCCchHHhhH
Confidence 34466789999999999999999999999999 5655344355555443
No 307
>PRK15419 proline:sodium symporter PutP; Provisional
Probab=35.85 E-value=6.3e+02 Score=32.87 Aligned_cols=43 Identities=28% Similarity=0.289 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHhhheecccCCcccccccccCchhHHHHHHHHHH
Q 000272 1503 CIVGLYIAVMILTMKWGRRVRGYENSLEQYGLDITSLPKVQNFLKGLIA 1551 (1744)
Q Consensus 1503 ~lvgLyla~lILl~lW~~r~~~~~~pl~slGL~~~~~~~~r~ll~GLll 1551 (1744)
.++.+|+.+++.+.+|..|+. +..++|-+..++ ...+..|+.+
T Consensus 9 ~~~~~y~~~~l~iG~~~~r~~---~s~~dy~lagr~---l~~~~~~~s~ 51 (502)
T PRK15419 9 VTFCVYIFGMILIGFIAWRST---KNFDDYILGGRS---LGPFVTALSA 51 (502)
T ss_pred HHHHHHHHHHHHHHHHHhhcC---CChhHheeeCCC---ccHHHHHHHH
Confidence 445667777777777776542 336677666543 3334444443
No 308
>COG1269 NtpI Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion]
Probab=35.77 E-value=6.7e+02 Score=34.08 Aligned_cols=41 Identities=39% Similarity=0.458 Sum_probs=27.2
Q ss_pred CCcchHHHHHH---------HHHhhcccCcchhhhhHHHHHhhccccccch
Q 000272 1404 DGEVDQERLVA---------MLADLGQKGGLLKLVGKLALLWGGLRGAMSL 1445 (1744)
Q Consensus 1404 ~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl 1445 (1744)
=+|+|.-=.+| |++|+|+ |=+|-|+|.+++.-.+-|..+++
T Consensus 355 Y~EidPt~~~a~~Fp~fFG~M~gD~gy-Glll~l~sl~l~~~~~~~~~~~~ 404 (660)
T COG1269 355 YGEIDPTPFLALFFPLFFGIMFGDLGY-GLLLFLISLLLLRYFKKRLPEGL 404 (660)
T ss_pred CCCcCCcchHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHhcccccchhH
Confidence 38999988887 8999998 44555666665554443344433
No 309
>PF03154 Atrophin-1: Atrophin-1 family; InterPro: IPR002951 Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA (OMIM:125370) is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins [, ]. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteristic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity [].. This entry includes Atrophin-1 and related proteins.
Probab=35.40 E-value=1.1e+02 Score=42.20 Aligned_cols=18 Identities=44% Similarity=0.414 Sum_probs=12.4
Q ss_pred HHHhhccccccchhHHHH
Q 000272 1433 ALLWGGLRGAMSLTEKLI 1450 (1744)
Q Consensus 1433 ~~~~~~~~~~~slt~~~~ 1450 (1744)
||.+-.+|-.||--+||-
T Consensus 799 a~agp~~~p~~~~~~~la 816 (982)
T PF03154_consen 799 ALAGPQLRPEMSYAERLA 816 (982)
T ss_pred hhcCCCCCccccccchhh
Confidence 334445689999988863
No 310
>TIGR00842 bcct choline/carnitine/betaine transport. properties inherent to their polypeptide chains.
Probab=34.60 E-value=1e+02 Score=39.68 Aligned_cols=47 Identities=26% Similarity=0.142 Sum_probs=36.6
Q ss_pred hhHHHHHHHhHhcCCcchHHHHHHHHHHHHHHHHhcCCcchHHHHHH
Q 000272 1632 GIIISGLAFALSQRSPQAIPGLWLLSLALAGVRQRSQGSLSVPIGLR 1678 (1744)
Q Consensus 1632 AIIISSLLFALlHlsl~~~i~lfLlGLvLa~aylrttGSLWlpIGLH 1678 (1744)
...-.++-++++|..+..+..+.+.|+.+||.+.|.+..+-++-.++
T Consensus 81 ~A~~~A~~~~~fHWG~~aWaiY~l~ala~aY~~~rk~~~~~iss~~~ 127 (453)
T TIGR00842 81 QAQEQALAYTLFHWGIHAWAIYALVGLALAYFHVRKGLPLRLSSALV 127 (453)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhheecCCCCchhhhhh
Confidence 35667999999999999999999999999998777444454444443
No 311
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=34.46 E-value=71 Score=36.52 Aligned_cols=40 Identities=8% Similarity=0.208 Sum_probs=31.9
Q ss_pred CCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcC
Q 000272 214 GLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNP 253 (1744)
Q Consensus 214 g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~ 253 (1744)
+.++.+|++.|+.|...+.-...+...|.++||+|+++|-
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 4568899999997665555555677789999999999984
No 312
>PRK02983 lysS lysyl-tRNA synthetase; Provisional
Probab=34.37 E-value=2.2e+02 Score=40.69 Aligned_cols=10 Identities=30% Similarity=0.458 Sum_probs=5.3
Q ss_pred HHHHHhhHHH
Q 000272 1613 LLFRSWLPEE 1622 (1744)
Q Consensus 1613 LLFRG~L~~~ 1622 (1744)
+++|..++..
T Consensus 128 ~~~R~~F~~~ 137 (1094)
T PRK02983 128 VLARREFPAR 137 (1094)
T ss_pred HHHHhhccCC
Confidence 3456666543
No 313
>PRK09442 panF sodium/panthothenate symporter; Provisional
Probab=34.31 E-value=1e+03 Score=30.79 Aligned_cols=35 Identities=17% Similarity=0.196 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHHHhhheecccCCccccccccc
Q 000272 1503 CIVGLYIAVMILTMKWGRRVRGYENSLEQYGLDIT 1537 (1744)
Q Consensus 1503 ~lvgLyla~lILl~lW~~r~~~~~~pl~slGL~~~ 1537 (1744)
.++.+|+.+++.+.+|..|+.++.+..++|-+..+
T Consensus 7 ~~i~~y~~~~~~ig~~~~r~~~~~~~~~dy~~agr 41 (483)
T PRK09442 7 LPLVIYLVLVFGISVYAYRKRQAGDFLNEYFLGNR 41 (483)
T ss_pred HHHHHHHHHHHHHHHHHhhcccCCCcccceeeeCC
Confidence 34566777777788887765443223566666544
No 314
>COG3859 Predicted membrane protein [Function unknown]
Probab=33.80 E-value=1.4e+02 Score=33.73 Aligned_cols=16 Identities=19% Similarity=0.382 Sum_probs=13.5
Q ss_pred chhhHHHHHHHhHhcC
Q 000272 1630 HRGIIISGLAFALSQR 1645 (1744)
Q Consensus 1630 ~~AIIISSLLFALlHl 1645 (1744)
+.|-++++++||++|+
T Consensus 53 ~kaG~~tGLl~Gll~~ 68 (185)
T COG3859 53 LKAGLLTGLLWGLLHL 68 (185)
T ss_pred hHHHHHHHHHHHHHHH
Confidence 3467889999999998
No 315
>TIGR01912 TatC-Arch Twin arginine targeting (Tat) protein translocase TatC, Archaeal clade. This model represents the TatC translocase component of the Sec-independent protein translocation system. This system is responsible for translocation of folded proteins, often with bound cofactors across the periplasmic membrane. A related model (TIGR00945) represents the bacterial clade of this family. TatC is often found (in bacteria) in a gene cluster with the two other components of the system, TatA/E (TIGR01411) and TatB (TIGR01410). A model also exists for the Twin-arginine signal sequence (TIGR01409).
Probab=33.48 E-value=8.8e+02 Score=28.78 Aligned_cols=71 Identities=21% Similarity=0.226 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHHH-HhhHHHHHhhcCCchhhHHHHHHHhHhcCCcchHHHHHHHHHHHHHHHHhcCCcchHHH
Q 000272 1600 GIVTATVVVLVEELLFR-SWLPEEIAADLDYHRGIIISGLAFALSQRSPQAIPGLWLLSLALAGVRQRSQGSLSVPI 1675 (1744)
Q Consensus 1600 ~lllallv~l~EELLFR-G~L~~~L~~~~g~~~AIIISSLLFALlHlsl~~~i~lfLlGLvLa~aylrttGSLWlpI 1675 (1744)
++.+++-.|+.==++.| |.+....-++ .|.-+++..+++|.+-..-+-.+..+++++-+..+|+- +++.+.
T Consensus 162 ~fGl~FelPvv~~~L~~~giv~~~~l~~--~rr~~~v~~~i~aAiiTP~pD~~sq~~laiPl~~LYei---si~i~~ 233 (237)
T TIGR01912 162 SFGLAFETPVVLVFLTRLGVVSASTLVD--YWRVIILVVLVFGAVITPDPDVVSMILLAIPLIALYGL---ALVISK 233 (237)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHH--hhhHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHH---HHHHHh
Confidence 34444445665555666 3333333222 23334555677777764326777778888888888876 466553
No 316
>PRK03356 L-carnitine/gamma-butyrobetaine antiporter; Provisional
Probab=33.39 E-value=4.3e+02 Score=34.82 Aligned_cols=47 Identities=21% Similarity=0.167 Sum_probs=37.1
Q ss_pred hhhHHHHHHHhHhcCCcchHHHHHHHHHHHHHHHHhcCCc-chHHHHH
Q 000272 1631 RGIIISGLAFALSQRSPQAIPGLWLLSLALAGVRQRSQGS-LSVPIGL 1677 (1744)
Q Consensus 1631 ~AIIISSLLFALlHlsl~~~i~lfLlGLvLa~aylrttGS-LWlpIGL 1677 (1744)
....--++-++++|.++..+..+.+.|+.+||.++|.... +-++-.+
T Consensus 128 ~~A~~~A~~~~~fHWG~~aWaiY~~~~la~ay~~y~~~~p~l~iss~~ 175 (504)
T PRK03356 128 TGAKELGLAYSLFHWGPLPWATYSFLSVAFGYFFFVRKMDVIRPSSTL 175 (504)
T ss_pred HHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHH
Confidence 4556789999999999999999999999999988875544 3434333
No 317
>PRK09543 znuB high-affinity zinc transporter membrane component; Reviewed
Probab=33.20 E-value=2.2e+02 Score=34.00 Aligned_cols=97 Identities=13% Similarity=0.015 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHhhHHHHHhhcCCchhhHHHHHHHhHhcCCcchHHHHHHHHHHHHHHHHhcC--CcchHHHHHHhHHhhh
Q 000272 1607 VVLVEELLFRSWLPEEIAADLDYHRGIIISGLAFALSQRSPQAIPGLWLLSLALAGVRQRSQ--GSLSVPIGLRTGIMAS 1684 (1744)
Q Consensus 1607 v~l~EELLFRG~L~~~L~~~~g~~~AIIISSLLFALlHlsl~~~i~lfLlGLvLa~aylrtt--GSLWlpIGLHagWn~~ 1684 (1744)
..+.=-++.|+.-+-.-.--.....++.+.- +|+. +..+..++...+.++.+.++..|++ ..--.+|.+.+++-.+
T Consensus 20 ~~lG~~vvlr~~~~~~~alsH~a~~G~~la~-~l~~-~~~~~a~~~~~l~a~~i~~l~~~~~~~~d~~iGi~~s~~~a~g 97 (261)
T PRK09543 20 GPLGSFVVWRRMSYFGDTLAHASLLGVAFGL-LLDV-NPFYAVIAVTLLLAGGLVWLEKRPQLAIDTLLGIMAHSALSLG 97 (261)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH-HHcc-hHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Confidence 4566788999888765543333333433332 3332 1122233444456666667666521 1345556666655443
Q ss_pred hheeecccceeecCCCCceeecC
Q 000272 1685 SFVLQKGGLLTYKPSLPLWITGT 1707 (1744)
Q Consensus 1685 ~~~l~vgGLl~~~~~gp~WLTGg 1707 (1744)
...+.... ....+...|+.|.
T Consensus 98 ~~l~s~~~--~~~~~~~~~L~Gs 118 (261)
T PRK09543 98 LVVVSLMS--NVRVDLMAYLFGD 118 (261)
T ss_pred HHHHHhcc--CCccCcceeeeCC
Confidence 32222111 1233557899887
No 318
>COG3336 Predicted membrane protein [Function unknown]
Probab=33.11 E-value=1.9e+02 Score=35.22 Aligned_cols=60 Identities=13% Similarity=-0.189 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHhhHH--------HHHhhcCCchhhHHHHHHHhHhcCCc-------------chHHHHHHHHHHHHHHHH
Q 000272 1607 VVLVEELLFRSWLPE--------EIAADLDYHRGIIISGLAFALSQRSP-------------QAIPGLWLLSLALAGVRQ 1665 (1744)
Q Consensus 1607 v~l~EELLFRG~L~~--------~L~~~~g~~~AIIISSLLFALlHlsl-------------~~~i~lfLlGLvLa~ayl 1665 (1744)
+.+.++.++++.-.. .+.--.+++.|.++-..+|-++|++. ..-+.+|+.|+++-|...
T Consensus 99 ~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~P~vA~ilfig~~~~~hvpplfda~v~~p~~H~lm~~~~f~~aylfww~mI 178 (299)
T COG3336 99 VTLALRALPPLGRGALAWLLVSRFTKFLSHPIVALILFIGAFWAWHVPPLFDAAVTSPTLHLLMNLLFFLSAYLFWWAMI 178 (299)
T ss_pred HHHHHHhccCCCcchhHHHhhhHHHHHhhhHHHHHHHHHHHHHHhccchhhhhhhhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 356666666554333 12223357899999999999999932 122345677777777665
Q ss_pred h
Q 000272 1666 R 1666 (1744)
Q Consensus 1666 r 1666 (1744)
+
T Consensus 179 ~ 179 (299)
T COG3336 179 G 179 (299)
T ss_pred c
Confidence 3
No 319
>PLN02248 cellulose synthase-like protein
Probab=32.60 E-value=1.1e+03 Score=34.08 Aligned_cols=26 Identities=12% Similarity=0.322 Sum_probs=11.6
Q ss_pred Ccchh-hhhHHHHHhhccccccchhHHHH
Q 000272 1423 GGLLK-LVGKLALLWGGLRGAMSLTEKLI 1450 (1744)
Q Consensus 1423 ~~~~~-~~~~~~~~~~~~~~~~slt~~~~ 1450 (1744)
.|++. |.-|---||+| || |+|-.||.
T Consensus 882 ~G~lQIf~sr~~Pll~~-~~-Lsl~QRL~ 908 (1135)
T PLN02248 882 TGSVEIFFSRNNALLAS-RR-LKFLQRIA 908 (1135)
T ss_pred hchHHHHhccCCccccC-CC-CCHHHHHH
Confidence 45553 22333334544 32 66655554
No 320
>PRK05419 putative sulfite oxidase subunit YedZ; Reviewed
Probab=32.55 E-value=8.5e+02 Score=28.33 Aligned_cols=13 Identities=8% Similarity=-0.100 Sum_probs=8.0
Q ss_pred hHHHHHHHhHhcC
Q 000272 1633 IIISGLAFALSQR 1645 (1744)
Q Consensus 1633 IIISSLLFALlHl 1645 (1744)
.+--+.+.+++|.
T Consensus 152 l~Y~a~~L~~~H~ 164 (205)
T PRK05419 152 LVYLIAILAPLHY 164 (205)
T ss_pred HHHHHHHHHHHHH
Confidence 3444555778885
No 321
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=31.41 E-value=9e+02 Score=33.51 Aligned_cols=51 Identities=20% Similarity=0.377 Sum_probs=34.3
Q ss_pred hhhHHHHHHHhHhcCCcchHHHHHHHHHHHHHHHHhcCCcchHHHHHHhHHh
Q 000272 1631 RGIIISGLAFALSQRSPQAIPGLWLLSLALAGVRQRSQGSLSVPIGLRTGIM 1682 (1744)
Q Consensus 1631 ~AIIISSLLFALlHlsl~~~i~lfLlGLvLa~aylrttGSLWlpIGLHagWn 1682 (1744)
.+-++.++++++.....+..++++.++=+++.+... .|.+..++|+=.+..
T Consensus 200 a~Gv~~Gli~~l~~~~~~~~~~~~af~GLlaG~fk~-~gK~g~~~g~~l~~~ 250 (764)
T TIGR02865 200 AGGVVIGVILGLANNANLYQIGVFGFAGLLGGIFKE-LGKIGTGIGYLVGFL 250 (764)
T ss_pred HHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhhcc-CCcceeeHHHHHHHH
Confidence 455778899999988766555555444444444444 678998888877653
No 322
>COG4200 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.34 E-value=9.8e+02 Score=28.67 Aligned_cols=27 Identities=15% Similarity=0.123 Sum_probs=16.7
Q ss_pred hHHHHHhhc-CCchhhHHHHHHHhHhcC
Q 000272 1619 LPEEIAADL-DYHRGIIISGLAFALSQR 1645 (1744)
Q Consensus 1619 L~~~L~~~~-g~~~AIIISSLLFALlHl 1645 (1744)
++-.|.-++ +...|++++-.+++++|.
T Consensus 155 lQ~wLsm~fknf~~al~igI~l~a~fva 182 (239)
T COG4200 155 LQFWLSMRFKNFAVALVIGIFLPALFVA 182 (239)
T ss_pred HHHHHHHHHHhhhHhHHHHHhHHHHHHH
Confidence 444555444 456677777666777776
No 323
>TIGR02908 CoxD_Bacillus cytochrome c oxidase, subunit IVB. This model represents a small clade of cytochrome oxidase subunit IV's found in the Bacilli.
Probab=30.99 E-value=5.5e+02 Score=27.39 Aligned_cols=31 Identities=13% Similarity=0.220 Sum_probs=25.3
Q ss_pred HHhhcCchhHHHHHHHHHHHHHHHHHHHhhh
Q 000272 1453 LHLADRPLLQRILGFVGMVLVLWSPVLVPLL 1483 (1744)
Q Consensus 1453 ~~~~~~P~~~rIllFllmllllwlPvaI~ll 1483 (1744)
.+-+.+-...-+++|++.+++..+|+.+...
T Consensus 18 ~~~~~~~~k~yviGFiLSiiLT~I~F~~V~~ 48 (110)
T TIGR02908 18 KAKNAEEMKKQIVTFALMIFLTLIAFFAVML 48 (110)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3445566778899999999999999999765
No 324
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=30.82 E-value=85 Score=33.90 Aligned_cols=45 Identities=22% Similarity=0.321 Sum_probs=32.8
Q ss_pred EEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q 000272 218 TLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLT 262 (1744)
Q Consensus 218 ~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RGhGgSplt 262 (1744)
++|.+-|..+...+..++.++.+|.++||+|.++=+=+||.....
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~~d 45 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFEID 45 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTTCS
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcccC
Confidence 366677776667777899999999999999998888888765443
No 325
>PF13347 MFS_2: MFS/sugar transport protein
Probab=30.63 E-value=8.2e+02 Score=30.46 Aligned_cols=17 Identities=29% Similarity=0.421 Sum_probs=11.8
Q ss_pred ceEEehhhHhhchhHHH
Q 000272 1331 SVMVGAVTAALGASALM 1347 (1744)
Q Consensus 1331 ~~~~~~~~~~~~~~~~~ 1347 (1744)
-+++|++..+++.-.++
T Consensus 74 ~~l~g~i~~~~~~~llf 90 (428)
T PF13347_consen 74 WILIGAILLALSFFLLF 90 (428)
T ss_pred EeehhhHHHHHHHHHhh
Confidence 34567787777777666
No 326
>PF09622 DUF2391: Putative integral membrane protein (DUF2391); InterPro: IPR024464 Members of this protein family are found in archaea and bacteria. Their function is unknown.
Probab=30.38 E-value=1.1e+03 Score=28.90 Aligned_cols=39 Identities=18% Similarity=0.164 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHhhcCCchhhHHHHHHHhHhcC
Q 000272 1600 GIVTATVVVLVEELLFRSWLPEEIAADLDYHRGIIISGLAFALSQR 1645 (1744)
Q Consensus 1600 ~lllallv~l~EELLFRG~L~~~L~~~~g~~~AIIISSLLFALlHl 1645 (1744)
++++++=++..||+. .|..+.++|.++++-.+.+++.|+
T Consensus 151 A~~lA~p~apTeEvw-------~lA~~ms~~~~l~l~~~sL~i~y~ 189 (267)
T PF09622_consen 151 ALFLAFPFAPTEEVW-------LLAAKMSPWHALALVLLSLAIMYL 189 (267)
T ss_pred HHHHhcCcCcchHHH-------HHHHhCCHHHHHHHHHHHHHHHHH
Confidence 444444457788874 577788888888888888888886
No 327
>PF11872 DUF3392: Protein of unknown function (DUF3392); InterPro: IPR021813 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.
Probab=30.32 E-value=1.6e+02 Score=31.05 Aligned_cols=33 Identities=21% Similarity=0.254 Sum_probs=26.3
Q ss_pred HHHhhcCchhHHHHHHHHHHHHHHHHHHHhhhh
Q 000272 1452 FLHLADRPLLQRILGFVGMVLVLWSPVLVPLLP 1484 (1744)
Q Consensus 1452 ~~~~~~~P~~~rIllFllmllllwlPvaI~llp 1484 (1744)
...++.++...|..+|+++..+...-+.+-..|
T Consensus 42 rr~l~~~~Fi~Rt~~FIlicAFGYGll~v~~tP 74 (106)
T PF11872_consen 42 RRLLSGYHFILRTLAFILICAFGYGLLIVWLTP 74 (106)
T ss_pred HHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456889999999999999988877666665555
No 328
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=29.99 E-value=1e+03 Score=33.50 Aligned_cols=185 Identities=14% Similarity=-0.005 Sum_probs=0.0
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCCCCchhhHHHHHHHHHHHHHHHHHHHhhheecccCCc------
Q 000272 1456 ADRPLLQRILGFVGMVLVLWSPVLVPLLPTIVQSWTTNNPSRIAEFACIVGLYIAVMILTMKWGRRVRGYENSL------ 1529 (1744)
Q Consensus 1456 ~~~P~~~rIllFllmllllwlPvaI~llp~Ll~~~~~~~p~~i~~l~~lvgLyla~lILl~lW~~r~~~~~~pl------ 1529 (1744)
.++....-+......+..+..|++...+....................++.+.++++.+++++...........
T Consensus 135 ~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (1146)
T PRK08633 135 ENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKK 214 (1146)
T ss_pred ccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccccccc
Q ss_pred --------ccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCccccchhhHHHHHHHhhhhHHHHHHHH
Q 000272 1530 --------EQYGLDITSLPKVQNFLKGLIAGVMLVLLIQSLNAVLGCVSFSWPSIVTSSLTAMAWLKVYGNISMLACQGI 1601 (1744)
Q Consensus 1530 --------~slGL~~~~~~~~r~ll~GLllGvlli~lv~li~~llG~i~~~~~~~~~s~~~~~~ll~~~~~~~~lil~~l 1601 (1744)
..+..-++. +..+.++.++.+..............+-...+.... .....+++...
T Consensus 215 ~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~---------------~~~~g~~~~~~ 278 (1146)
T PRK08633 215 YLFPKLLWRNLKLLRSD-RVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDN---------------TFQVQYLLAAS 278 (1146)
T ss_pred cccHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCc---------------HHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhcCCchhhHHHHHHHhHhcC-------CcchHHHHHHHHHHHHHHH
Q 000272 1602 VTATVVVLVEELLFRSWLPEEIAADLDYHRGIIISGLAFALSQR-------SPQAIPGLWLLSLALAGVR 1664 (1744)
Q Consensus 1602 llallv~l~EELLFRG~L~~~L~~~~g~~~AIIISSLLFALlHl-------sl~~~i~lfLlGLvLa~ay 1664 (1744)
.++.+++ +++...+.++++....++++.+++++.-+ .+..++..+++|+..+...
T Consensus 279 ~ig~~~g--------~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 340 (1146)
T PRK08633 279 AIGIGIG--------SLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFI 340 (1146)
T ss_pred HHHHHHH--------HHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhh
No 329
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=29.43 E-value=4.4e+02 Score=32.98 Aligned_cols=30 Identities=23% Similarity=0.152 Sum_probs=16.7
Q ss_pred ccccchhHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHhhh
Q 000272 1440 RGAMSLTEKLILFLHLADRPLLQRILGFVGMVLVLWSPVLVPLL 1483 (1744)
Q Consensus 1440 ~~~~slt~~~~~~~~~~~~P~~~rIllFllmllllwlPvaI~ll 1483 (1744)
.|.||| ||+ .+.-|+.|+++-..-..+..+
T Consensus 2 ~~~~~~-~~~-------------~~~~~~~~~~~q~~~~~~~~~ 31 (358)
T PLN00411 2 AGTVSL-WRR-------------EAVFLTAMLATETSVVGISTL 31 (358)
T ss_pred Ccchhh-hhh-------------ccchHHHHHHHHHHHHHHHHH
Confidence 478898 554 344455566555544444333
No 330
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=29.16 E-value=4.2e+02 Score=30.66 Aligned_cols=7 Identities=43% Similarity=0.577 Sum_probs=5.3
Q ss_pred cccCcch
Q 000272 1420 GQKGGLL 1426 (1744)
Q Consensus 1420 ~~~~~~~ 1426 (1744)
+||-|+-
T Consensus 55 eQkkGit 61 (226)
T COG4858 55 EQKKGIT 61 (226)
T ss_pred hhhccch
Confidence 6888874
No 331
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=28.98 E-value=8.4e+02 Score=32.88 Aligned_cols=15 Identities=13% Similarity=0.508 Sum_probs=9.4
Q ss_pred chhhhhHHHHHhhcc
Q 000272 1425 LLKLVGKLALLWGGL 1439 (1744)
Q Consensus 1425 ~~~~~~~~~~~~~~~ 1439 (1744)
=-|...=+...|.++
T Consensus 194 ~WRw~~~~~~i~~~i 208 (599)
T PF06609_consen 194 GWRWIFYIFIIWSGI 208 (599)
T ss_pred CcchHHHHHHHHHHH
Confidence 357766666666665
No 332
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=28.96 E-value=1.2e+02 Score=36.20 Aligned_cols=34 Identities=24% Similarity=0.160 Sum_probs=22.2
Q ss_pred CcchHHHHHHHHHHHHHHHHhcCCcchHHHHHHhHH
Q 000272 1646 SPQAIPGLWLLSLALAGVRQRSQGSLSVPIGLRTGI 1681 (1744)
Q Consensus 1646 sl~~~i~lfLlGLvLa~aylrttGSLWlpIGLHagW 1681 (1744)
.++.++.+++++++++++... |.-+..||+=+..
T Consensus 23 ~~l~~~~~~~~~F~~~ml~~~--G~r~~~i~~~~Ll 56 (284)
T PF12805_consen 23 PWLLILVLALLTFFFGMLGVY--GPRAATIGFATLL 56 (284)
T ss_pred cHHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHH
Confidence 555666666677667666665 6677777765543
No 333
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=28.73 E-value=8.6e+02 Score=27.95 Aligned_cols=14 Identities=43% Similarity=0.551 Sum_probs=7.6
Q ss_pred HHHHHHhh--cccCcc
Q 000272 1412 LVAMLADL--GQKGGL 1425 (1744)
Q Consensus 1412 ~~~~~~~~--~~~~~~ 1425 (1744)
|-.||.+| |||-|.
T Consensus 31 L~eil~~LleaQk~G~ 46 (206)
T PF06570_consen 31 LEEILPHLLEAQKKGK 46 (206)
T ss_pred HHHHHHHHHHHHhCCC
Confidence 33444444 777664
No 334
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.52 E-value=1e+02 Score=35.03 Aligned_cols=51 Identities=14% Similarity=0.230 Sum_probs=38.0
Q ss_pred HHHHHHHHhh-CCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEecCCCChh
Q 000272 276 CTAIQFIGKA-RPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLE 329 (1744)
Q Consensus 276 ~aaId~Lrkr-yP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlISpP~Dl~ 329 (1744)
++.-.|+.+. .| .+.+.-|.||||..++++.-++|+ ..+.+|+++..+|..
T Consensus 88 ~AyerYv~eEalp-gs~~~sgcsmGayhA~nfvfrhP~--lftkvialSGvYdar 139 (227)
T COG4947 88 RAYERYVIEEALP-GSTIVSGCSMGAYHAANFVFRHPH--LFTKVIALSGVYDAR 139 (227)
T ss_pred HHHHHHHHHhhcC-CCccccccchhhhhhhhhheeChh--HhhhheeecceeeHH
Confidence 3444565443 45 346788999999999999999886 578888888887764
No 335
>TIGR00930 2a30 K-Cl cotransporter.
Probab=28.44 E-value=1.9e+03 Score=31.23 Aligned_cols=22 Identities=9% Similarity=0.152 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 000272 1542 VQNFLKGLIAGVMLVLLIQSLN 1563 (1744)
Q Consensus 1542 ~r~ll~GLllGvlli~lv~li~ 1563 (1744)
-|.+-.|+++++++..+++++.
T Consensus 310 ~r~IPratl~ai~i~~vlYllv 331 (953)
T TIGR00930 310 QKAIPKGTLLAILTTTVVYLGS 331 (953)
T ss_pred hhhhHHHHHHHHHHHHHHHHHH
Confidence 3566667666666666655443
No 336
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=28.38 E-value=5.3e+02 Score=36.80 Aligned_cols=16 Identities=25% Similarity=0.688 Sum_probs=9.2
Q ss_pred HhhccccccchhHHHH
Q 000272 1435 LWGGLRGAMSLTEKLI 1450 (1744)
Q Consensus 1435 ~~~~~~~~~slt~~~~ 1450 (1744)
||.|.++-++|-.||.
T Consensus 836 l~~G~~~rL~l~QRL~ 851 (1079)
T PLN02638 836 IWYGYGGRLKWLERFA 851 (1079)
T ss_pred cccccCCCCCHHHHHH
Confidence 5666655566665554
No 337
>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system []. Some members of this family have been annotated as putative ABC transporter permease proteins.
Probab=28.33 E-value=1e+03 Score=32.72 Aligned_cols=11 Identities=18% Similarity=0.392 Sum_probs=5.7
Q ss_pred HHHHHHHHhhh
Q 000272 1473 VLWSPVLVPLL 1483 (1744)
Q Consensus 1473 llwlPvaI~ll 1483 (1744)
++|+|+++..+
T Consensus 149 ~i~lPL~llgi 159 (843)
T PF09586_consen 149 MILLPLLLLGI 159 (843)
T ss_pred HHHHHHHHHHH
Confidence 44555555444
No 338
>COG1615 Uncharacterized conserved protein [Function unknown]
Probab=27.85 E-value=5.4e+02 Score=35.19 Aligned_cols=33 Identities=9% Similarity=0.160 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHhhcccccCCc
Q 000272 1543 QNFLKGLIAGVMLVLLIQ-SLNAVLGCVSFSWPS 1575 (1744)
Q Consensus 1543 r~ll~GLllGvlli~lv~-li~~llG~i~~~~~~ 1575 (1744)
..++.|.+++++++.++. +..+++|++.+....
T Consensus 148 ~rlv~~~l~~~l~~a~~~~v~~Yif~~irlse~~ 181 (885)
T COG1615 148 YRLVLSWLLVALLLAFLAAVTHYIFGGIRLSEFR 181 (885)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhceeecccc
Confidence 344555555555444444 667788988766544
No 339
>PRK02509 hypothetical protein; Provisional
Probab=27.85 E-value=1.8e+03 Score=31.53 Aligned_cols=42 Identities=21% Similarity=0.248 Sum_probs=19.5
Q ss_pred ccccccccCchhHHHHHHHHHHHHHHHHHHH-HHHHHhhccccc
Q 000272 1530 EQYGLDITSLPKVQNFLKGLIAGVMLVLLIQ-SLNAVLGCVSFS 1572 (1744)
Q Consensus 1530 ~slGL~~~~~~~~r~ll~GLllGvlli~lv~-li~~llG~i~~~ 1572 (1744)
.++||-.-. --+..++.++++++++++++. ++.++++...+.
T Consensus 228 ~DisFYvF~-LPf~~~l~~~l~~~~~~~li~~~~~Yl~~~~~l~ 270 (973)
T PRK02509 228 RDISFYIFQ-LPLWELLEFWLMGLFLYGFIAVTLTYLLSADSLS 270 (973)
T ss_pred CCcEEEEEe-hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 345554222 123455566665555444443 333555555543
No 340
>PRK11715 inner membrane protein; Provisional
Probab=27.81 E-value=1e+03 Score=30.99 Aligned_cols=21 Identities=33% Similarity=0.442 Sum_probs=12.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 000272 1541 KVQNFLKGLIAGVMLVLLIQS 1561 (1744)
Q Consensus 1541 ~~r~ll~GLllGvlli~lv~l 1561 (1744)
....++.|+++.++.++++.+
T Consensus 331 piQYlLVGlAl~lFYLLLLSl 351 (436)
T PRK11715 331 PVQYLLVGLALVLFYLLLLSL 351 (436)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 356677777766655555443
No 341
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=27.36 E-value=49 Score=43.41 Aligned_cols=53 Identities=11% Similarity=0.139 Sum_probs=32.3
Q ss_pred HHHHHHHHhh-CC-CCcEEEEEecHHHHHHHHHHHHh-----CCC----CCceEEEEecCCCCh
Q 000272 276 CTAIQFIGKA-RP-WTTLMSVGWGYGANMLTKYLAEV-----GER----TPLTAVTCIDNPFDL 328 (1744)
Q Consensus 276 ~aaId~Lrkr-yP-~spIvLVGhSMGG~IaL~YLae~-----ge~----s~L~AaVlISpP~Dl 328 (1744)
.++++.+.+. -+ ..|++-+||||||.++=..+... |+- ..-.+++.++.|...
T Consensus 511 ~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHrG 574 (697)
T KOG2029|consen 511 NELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHRG 574 (697)
T ss_pred HHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCCC
Confidence 3555555443 23 56899999999998776555442 110 135567777777543
No 342
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=27.01 E-value=1.4e+03 Score=30.52 Aligned_cols=23 Identities=17% Similarity=0.414 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhh
Q 000272 1463 RILGFVGMVLVLWSPVLVPLLPT 1485 (1744)
Q Consensus 1463 rIllFllmllllwlPvaI~llp~ 1485 (1744)
-+..|+.-+++.+.|.+++.+|.
T Consensus 169 l~~afl~Glll~l~PCvlP~lpi 191 (571)
T PRK00293 169 LLWFFLIGIGLAFTPCVLPMYPI 191 (571)
T ss_pred HHHHHHHHHHHhccchhhHhHHH
Confidence 34566667777789999988873
No 343
>PRK13592 ubiA prenyltransferase; Provisional
Probab=26.77 E-value=8e+02 Score=30.38 Aligned_cols=30 Identities=20% Similarity=0.038 Sum_probs=20.4
Q ss_pred HHHhhccccccchhHHHHHHHHhhcCchhH
Q 000272 1433 ALLWGGLRGAMSLTEKLILFLHLADRPLLQ 1462 (1744)
Q Consensus 1433 ~~~~~~~~~~~slt~~~~~~~~~~~~P~~~ 1462 (1744)
.+.+++-|-+=-.=|+.+-.-.-.+||++.
T Consensus 56 f~~~~~gniiNDy~D~EIDrIN~P~RPLPs 85 (299)
T PRK13592 56 FGFWMILRIADDFKDYETDRRLFPHRALPS 85 (299)
T ss_pred HHHHHHhHHHHHHhhHHHhhhcCCCCCCCc
Confidence 345666666666667777777777788765
No 344
>PLN02248 cellulose synthase-like protein
Probab=26.62 E-value=6.7e+02 Score=35.98 Aligned_cols=34 Identities=18% Similarity=-0.063 Sum_probs=21.0
Q ss_pred HHHHHHhhHHHHHhhcCCchhhHHHHHHHhHhcC
Q 000272 1612 ELLFRSWLPEEIAADLDYHRGIIISGLAFALSQR 1645 (1744)
Q Consensus 1612 ELLFRG~L~~~L~~~~g~~~AIIISSLLFALlHl 1645 (1744)
|+.+.|.-++.+-+.-..|.---.|+.+||.++.
T Consensus 965 E~~wsGvsl~~WWrnQq~W~I~~tSA~L~A~l~a 998 (1135)
T PLN02248 965 EIKWSGITLEEWWRNEQFWLIGGTSAHLAAVLQG 998 (1135)
T ss_pred HHhhccccHHHHhhhhheeeehhhHHHHHHHHHH
Confidence 7777777665554444456655566666666664
No 345
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=26.54 E-value=1.6e+02 Score=35.89 Aligned_cols=96 Identities=16% Similarity=0.220 Sum_probs=62.6
Q ss_pred CCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCC-CCCCCCCCCC-------------CCCCcC----------
Q 000272 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPR-GCGGSPLTTS-------------RLFTAA---------- 270 (1744)
Q Consensus 215 ~~P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~R-GhGgSpltsp-------------rly~ag---------- 270 (1744)
..|++|++-|.+|+..+.+++++..++.+.+-+.+++|+- .+-.-|.... .-|..+
T Consensus 17 ~~p~~ilVvGMAGSGKTTF~QrL~~hl~~~~~ppYviNLDPAv~~vpy~aniDIRDtVkYkEvMkqY~LGPNGgI~TsLN 96 (366)
T KOG1532|consen 17 QRPVIILVVGMAGSGKTTFMQRLNSHLHAKKTPPYVINLDPAVRNVPYPANIDIRDTVKYKEVMKQYQLGPNGGIVTSLN 96 (366)
T ss_pred cCCcEEEEEecCCCCchhHHHHHHHHHhhccCCCeEEeCCHHHhcCCCccCCchhhhhhHHHHHHHhCCCCCcchhhhHH
Confidence 4688888889988888889999999999999988888873 2211111000 001100
Q ss_pred -cHHHHHHHHHHHHhhCC---------CCcEEEEEecHHHHHHHHHHHHh
Q 000272 271 -DSDDICTAIQFIGKARP---------WTTLMSVGWGYGANMLTKYLAEV 310 (1744)
Q Consensus 271 -~tdDL~aaId~LrkryP---------~spIvLVGhSMGG~IaL~YLae~ 310 (1744)
...-+.+++.+|.++.+ ...|-++-||.-|.|++..++..
T Consensus 97 LF~tk~dqv~~~iek~~~~~~~~liDTPGQIE~FtWSAsGsIIte~lass 146 (366)
T KOG1532|consen 97 LFATKFDQVIELIEKRAEEFDYVLIDTPGQIEAFTWSASGSIITETLASS 146 (366)
T ss_pred HHHHHHHHHHHHHHHhhcccCEEEEcCCCceEEEEecCCccchHhhHhhc
Confidence 12344556666655432 14677889999999998887764
No 346
>PF01580 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR002543 The FtsK/SpoIIIE domain is found extensively in a wide variety of proteins from prokaryotes and plasmids [] some of which contain up to three copies.The domain contains a putative ATP binding P-loop motif. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification []. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer []. ; GO: 0000166 nucleotide binding, 0003677 DNA binding, 0005524 ATP binding, 0007049 cell cycle, 0007059 chromosome segregation, 0051301 cell division, 0016021 integral to membrane; PDB: 2IUS_E 2IUU_A 2IUT_A.
Probab=26.43 E-value=3.4e+02 Score=30.52 Aligned_cols=79 Identities=19% Similarity=0.322 Sum_probs=46.4
Q ss_pred CCcEEEEEecCCCccccccCCCcEEEEEcCCCCCchhHHHHHHHHHHHh----CCcEEEEEcCCCCCCCCCC-CCCCC--
Q 000272 195 DGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALR----RGFFPVVMNPRGCGGSPLT-TSRLF-- 267 (1744)
Q Consensus 195 DGG~IaLDW~~p~~~~~~~g~~P~VVLLHGltGGS~~sYIr~La~~La~----~GYrVVVfD~RGhGgSplt-sprly-- 267 (1744)
.|..+.+|....+ =+++-|-+|+..+..++.++..++. ...+++++|..|....... .+...
T Consensus 27 ~~~~v~~dl~~~~-----------h~li~G~tgsGKS~~l~~ll~~l~~~~~p~~~~l~iiD~k~~~l~~~~~~~~~~~~ 95 (205)
T PF01580_consen 27 RGDPVVLDLKKNP-----------HLLIAGATGSGKSTLLRTLLLSLALTYSPDDVQLYIIDPKGSDLAPLADLPHVAAV 95 (205)
T ss_dssp TS-EEEEEGGGS------------SEEEE--TTSSHHHHHHHHHHHHHTT--TTTEEEEEE-TTSSCCGGGTT-TTBSS-
T ss_pred CCCEEEEEcCCCc-----------eEEEEcCCCCCccHHHHHHHHHHHHHhcCCccEEEEEcCCccccchhhhhhhhccc
Confidence 5666766655321 1555677777777788888888887 7899999999977544322 12222
Q ss_pred -CcCcHHHHHHHHHHHHh
Q 000272 268 -TAADSDDICTAIQFIGK 284 (1744)
Q Consensus 268 -~ag~tdDL~aaId~Lrk 284 (1744)
.....+++..+++++..
T Consensus 96 ~~~~~~~~~~~~l~~l~~ 113 (205)
T PF01580_consen 96 AVATDPEEILRLLEELVE 113 (205)
T ss_dssp S-B-SHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHH
Confidence 23355667777666643
No 347
>COG3559 TnrB3 Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]
Probab=26.37 E-value=1.6e+03 Score=29.43 Aligned_cols=217 Identities=19% Similarity=0.135 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhheecc----------------cCCcccccccccCchhHHHHHHHHHHHHHHHHHHHHHH
Q 000272 1500 EFACIVGLYIAVMILTMKWGRRVRGY----------------ENSLEQYGLDITSLPKVQNFLKGLIAGVMLVLLIQSLN 1563 (1744)
Q Consensus 1500 ~l~~lvgLyla~lILl~lW~~r~~~~----------------~~pl~slGL~~~~~~~~r~ll~GLllGvlli~lv~li~ 1563 (1744)
++..++.+.+++++..+.+..+.+++ +.-.+-+||.+.. -|.-++++.+|..++.+++.-.
T Consensus 241 Wl~~llt~~~aa~l~gvAy~L~~rRdvg~gllpeR~~k~~~~~~l~s~~gL~l~L---~Rg~lI~W~v~~fllglvygs~ 317 (536)
T COG3559 241 WLVLLLTLATAAVLTGVAYRLRARRDVGAGLLPERPGKGTAGPMLSSPFGLALRL---NRGSLILWTVGLFLLGLVYGSV 317 (536)
T ss_pred HHHHHHHHHHHHHHHHHHheeecCCCCCcccccCCCCcccCCCcccCCccceeee---ccCccHHHHHHHHHHHHHHHHH
Q ss_pred HHhhcccccCCccccchhhHH--------HHHHHhhhhHHHHHHHHHHHHHH-HHHHHHHHHHhhHHHHHhhcCCchhhH
Q 000272 1564 AVLGCVSFSWPSIVTSSLTAM--------AWLKVYGNISMLACQGIVTATVV-VLVEELLFRSWLPEEIAADLDYHRGII 1634 (1744)
Q Consensus 1564 ~llG~i~~~~~~~~~s~~~~~--------~ll~~~~~~~~lil~~lllallv-~l~EELLFRG~L~~~L~~~~g~~~AII 1634 (1744)
+---.-.+..+......+.++ .++....++..++..++.+.+.. =..|| |+-....+...-=..+-..
T Consensus 318 fg~l~~fL~~n~avrqave~~e~ag~le~~Flv~lfsIisil~a~~~V~~vlkl~geE---r~nr~eal~a~~vsR~~vl 394 (536)
T COG3559 318 FGGLGDFLGDNTAVRQAVERMEGAGALEQAFLVLLFSIISILAAAFAVSLVLKLHGEE---RGNRAEALLAGAVSRTHVL 394 (536)
T ss_pred hhhhhhhhcCcHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHh---hcchHHHHHhcchhhhhHH
Q ss_pred HHHHHHhHhcCCcchHHHHHHHHHHHH-----------------HHHHhcCCcchHHHHH------------HhHHhhhh
Q 000272 1635 ISGLAFALSQRSPQAIPGLWLLSLALA-----------------GVRQRSQGSLSVPIGL------------RTGIMASS 1685 (1744)
Q Consensus 1635 ISSLLFALlHlsl~~~i~lfLlGLvLa-----------------~aylrttGSLWlpIGL------------HagWn~~~ 1685 (1744)
.|-+.-++.-.....++.++..++.++ ..++- -.|+-+++ |-+|....
T Consensus 395 ~syl~~all~~~l~tllAl~ga~L~~~~~~~~v~~s~~~~v~sgl~~lv---av~f~l~ia~ll~GLaPr~t~laWlyl~ 471 (536)
T COG3559 395 ASYLAMALLGSALATLLALVGAGLAYGMTVGDVGGSLPTVVGSGLVQLV---AVWFLLAIAVLLFGLAPRFTPLAWLYLI 471 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCccHHHHHHHhHHHHH---HHHHHHHHHHHHhccchhhhhhHHHHHH
Q ss_pred heeec---ccceee-------cCCCCceeecCCCCCcchhHHHHHHHHHHHHHh
Q 000272 1686 FVLQK---GGLLTY-------KPSLPLWITGTHPFQPFSGVVGLAFSLILAIIL 1729 (1744)
Q Consensus 1686 ~~l~v---gGLl~~-------~~~gp~WLTGg~~fgPeaGliGlv~llliaiil 1729 (1744)
+.+-+ +|++++ ++-+..|-.+..+++ ++.++.++++...+
T Consensus 472 ~~~fvtyLg~Llslpewl~nlSp~~hip~lpved~n----~~pll~l~ii~vaL 521 (536)
T COG3559 472 VGFFVTYLGGLLSLPEWLLNLSPFAHIPRLPVEDFN----AVPLLWLLIIDVAL 521 (536)
T ss_pred HHHHHHHHHHhcccHHHHhcCCccccCccCCccccc----hHHHHHHHHHHHHH
No 348
>TIGR02121 Na_Pro_sym sodium/proline symporter. This family consists of the sodium/proline symporter (proline permease) from a number of Gram-negative and Gram-positive bacteria and from the archaeal genus Methanosarcina. Using the related pantothenate permease as an outgroup, candidate sequences from Bifidobacterium longum and several from archaea are found to be outside the clade defined by known proline permeases. These sequences, scoring between 570 and -40, define the range between trusted and noise cutoff scores.
Probab=26.07 E-value=1.1e+03 Score=30.55 Aligned_cols=34 Identities=21% Similarity=0.350 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhheecccCCccccccccc
Q 000272 1501 FACIVGLYIAVMILTMKWGRRVRGYENSLEQYGLDIT 1537 (1744)
Q Consensus 1501 l~~lvgLyla~lILl~lW~~r~~~~~~pl~slGL~~~ 1537 (1744)
..+++.+|+.+++.+.+|..|+.+ ..++|-+..+
T Consensus 3 ~~~~~~~y~~~~l~iG~~~~r~~~---s~~df~lagr 36 (487)
T TIGR02121 3 ILITFGVYLIIMLLIGFYAYKKTT---NLSDYVLGGR 36 (487)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccC---chHHHeeeCC
Confidence 345566777777777777766433 3556655543
No 349
>PF06899 WzyE: WzyE protein; InterPro: IPR010691 This family consists of several WzyE proteins, which appear to be specific to Enterobacteria. Members of this family are described as putative ECA polymerases this has been found to be incorrect []. The function of this family is unknown.; GO: 0016021 integral to membrane
Probab=25.82 E-value=8.2e+02 Score=31.49 Aligned_cols=38 Identities=16% Similarity=0.093 Sum_probs=26.1
Q ss_pred CchhhHHHHHHHhHhcCCc---------chHHHHHHHHHHHHHHHHh
Q 000272 1629 YHRGIIISGLAFALSQRSP---------QAIPGLWLLSLALAGVRQR 1666 (1744)
Q Consensus 1629 ~~~AIIISSLLFALlHlsl---------~~~i~lfLlGLvLa~aylr 1666 (1744)
.|+..++.++.||+++.-. .++...+++|+.-+|+-.+
T Consensus 180 ~wi~fLi~~v~FGlltYviVGGTRanl~~A~~lflfiGi~rg~is~k 226 (448)
T PF06899_consen 180 SWILFLISTVAFGLLTYVIVGGTRANLIIAFALFLFIGIYRGWISLK 226 (448)
T ss_pred HHHHHHHHHHHHhhheeeEEcCcHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 3999999999999999821 2344445566666665443
No 350
>COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=25.65 E-value=1e+03 Score=32.95 Aligned_cols=189 Identities=22% Similarity=0.153 Sum_probs=0.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhh-heecccCCcccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCc
Q 000272 1497 RIAEFACIVGLYIAVMILTMKWGR-RVRGYENSLEQYGLDITSLPKVQNFLKGLIAGVMLVLLIQSLNAVLGCVSFSWPS 1575 (1744)
Q Consensus 1497 ~i~~l~~lvgLyla~lILl~lW~~-r~~~~~~pl~slGL~~~~~~~~r~ll~GLllGvlli~lv~li~~llG~i~~~~~~ 1575 (1744)
+.+-+..++++...++-.+.+-.. ++|-+.+ ......+.-++.+-..+..+++++++
T Consensus 252 R~~qFL~Lv~L~all~agv~VA~A~~~Y~~~r------------~~~iA~lK~LGA~~~~~~~l~l~Qil---------- 309 (829)
T COG3127 252 RFQQFLTLVGLLALLLAGVAVANAVRHYLDSR------------YDAIAILKCLGASRGQLRLLYLLQIL---------- 309 (829)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc------------ccHHHHHHHhCCchhHHHHHHHHHHH----------
Q ss_pred cccchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcC---------CchhhHHHHHHHhHhcC-
Q 000272 1576 IVTSSLTAMAWLKVYGNISMLACQGIVTATVVVLVEELLFRSWLPEEIAADLD---------YHRGIIISGLAFALSQR- 1645 (1744)
Q Consensus 1576 ~~~s~~~~~~ll~~~~~~~~lil~~lllallv~l~EELLFRG~L~~~L~~~~g---------~~~AIIISSLLFALlHl- 1645 (1744)
++.+.+.+++.+++..=|.+.+-.|-..|--..+ -..|+++.++.|++.-+
T Consensus 310 -------------------~v~~lgiaiG~vlG~l~~~~l~~~L~~~LPv~~p~~~l~P~~~alAa~fl~~l~fal~PL~ 370 (829)
T COG3127 310 -------------------MVLLLGIAIGLVLGALAPLVLMALLASLLPVPLPAGGLWPWALALAALFLIALAFALLPLG 370 (829)
T ss_pred -------------------HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCccccchHHHHHHHHHHHHHHhhhhhhH
Q ss_pred ---------------------CcchHHHHHHHHHHHHHHHHhcCCcchHHHHHHhHHhhhhhee----------------
Q 000272 1646 ---------------------SPQAIPGLWLLSLALAGVRQRSQGSLSVPIGLRTGIMASSFVL---------------- 1688 (1744)
Q Consensus 1646 ---------------------sl~~~i~lfLlGLvLa~aylrttGSLWlpIGLHagWn~~~~~l---------------- 1688 (1744)
....+.+.++.++.++.+..++.++..+.+.+-++-.++..++
T Consensus 371 rl~~vpp~av~R~~~~~~~~p~~~~l~~~~~~~~~la~La~~~a~d~~l~ail~g~v~~A~~vl~~v~~~~~~~~~r~~~ 450 (829)
T COG3127 371 RLRRVPPLAVLRQGVEAGVWPLLTYLAGAALLLVALAALAVLMAGDRLLWAILAGAVVLAFLVLRLVAGGGLWAALRSLR 450 (829)
T ss_pred HhccCChHHHHhccccccccchhHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q ss_pred ---ecccceeecCCCCceeecCCCCCcchhHHHHHHHHHHHHHhhc
Q 000272 1689 ---QKGGLLTYKPSLPLWITGTHPFQPFSGVVGLAFSLILAIILYP 1731 (1744)
Q Consensus 1689 ---~vgGLl~~~~~gp~WLTGg~~fgPeaGliGlv~llliaiil~~ 1731 (1744)
-.-.+---....|-|.|...- .-+|+.+.++.++.+..
T Consensus 451 ~~s~~lRLal~~l~R~~~~t~sq~-----~algLgl~LLa~l~lir 491 (829)
T COG3127 451 LTSLALRLALGNLLRPGAATPSQV-----LALGLGLMLLALLALIR 491 (829)
T ss_pred ccchhHHHHHHHhcCCCcccHHHH-----HHHHHHHHHHHHHHHHh
No 351
>COG1269 NtpI Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion]
Probab=25.50 E-value=1.9e+03 Score=30.02 Aligned_cols=25 Identities=20% Similarity=0.187 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc
Q 000272 1544 NFLKGLIAGVMLVLLIQSLNAVLGC 1568 (1744)
Q Consensus 1544 ~ll~GLllGvlli~lv~li~~llG~ 1568 (1744)
.+...+++|++-+.+.+++.++-.+
T Consensus 458 ~m~~sl~iG~~hl~~G~~lg~~~~~ 482 (660)
T COG1269 458 ILILSLLIGVLHLSLGLLLGFINRV 482 (660)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445666666666665555444433
No 352
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=25.20 E-value=1.3e+03 Score=29.88 Aligned_cols=21 Identities=29% Similarity=0.437 Sum_probs=12.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 000272 1541 KVQNFLKGLIAGVMLVLLIQS 1561 (1744)
Q Consensus 1541 ~~r~ll~GLllGvlli~lv~l 1561 (1744)
....++.|+++.++.++++.+
T Consensus 325 piQY~LVGlAl~lFYlLLLSl 345 (430)
T PF06123_consen 325 PIQYLLVGLALVLFYLLLLSL 345 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 356677777766655554433
No 353
>PF07185 DUF1404: Protein of unknown function (DUF1404); InterPro: IPR009844 This family consists of several archaeal proteins of around 180 residues in length. Members of this family seem to be found exclusively in Sulfolobus tokodaii and Sulfolobus solfataricus. The function of this family is unknown.
Probab=25.05 E-value=2.1e+02 Score=32.51 Aligned_cols=67 Identities=12% Similarity=-0.043 Sum_probs=44.8
Q ss_pred HHHhhHHHHHhhcCCchhhHHHHHHHhHhcCCc-------------chHHHHHHHHHHHHHHHHhcCCcchHHHHHHhHH
Q 000272 1615 FRSWLPEEIAADLDYHRGIIISGLAFALSQRSP-------------QAIPGLWLLSLALAGVRQRSQGSLSVPIGLRTGI 1681 (1744)
Q Consensus 1615 FRG~L~~~L~~~~g~~~AIIISSLLFALlHlsl-------------~~~i~lfLlGLvLa~aylrttGSLWlpIGLHagW 1681 (1744)
+-|.+......+.+ +..+++.+++=.++|+.. ...+.+++-|++.|..... -+.+.-+.+-+.|
T Consensus 35 ~~g~llgy~~~k~~-~~~~i~g~~~~v~WhlP~~F~l~a~~~~~Rii~elSl~lgGiL~Gss~~~--m~~~~Ki~Lf~lw 111 (169)
T PF07185_consen 35 WGGFLLGYKLFKGK-IIFLILGIIPAVFWHLPYFFDLSASSLWYRIIDELSLFLGGILIGSSIPS--MSFVFKITLFALW 111 (169)
T ss_pred HHHHHHHHHHhccc-chhhhhhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH--HHHHHHHHHHHHH
Confidence 33555555444443 445778888889999931 3456677888877765544 3577778899999
Q ss_pred hhh
Q 000272 1682 MAS 1684 (1744)
Q Consensus 1682 n~~ 1684 (1744)
+++
T Consensus 112 M~g 114 (169)
T PF07185_consen 112 MIG 114 (169)
T ss_pred HHH
Confidence 865
No 354
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=24.83 E-value=4.2e+02 Score=34.24 Aligned_cols=26 Identities=15% Similarity=0.011 Sum_probs=16.8
Q ss_pred hhHHHHHhhccccccchhHHHHHHHH
Q 000272 1429 VGKLALLWGGLRGAMSLTEKLILFLH 1454 (1744)
Q Consensus 1429 ~~~~~~~~~~~~~~~slt~~~~~~~~ 1454 (1744)
++=.+|.=.|-.+++..-|-++..+.
T Consensus 119 l~~~il~~i~~~~s~Vfyds~L~~~~ 144 (438)
T COG2270 119 LLFLILASIGFEFSNVFYDSMLPRLT 144 (438)
T ss_pred HHHHHHHHHhcchhheehhhHhhhhc
Confidence 33445555677888888887766443
No 355
>PF12270 Cyt_c_ox_IV: Cytochrome c oxidase subunit IV; InterPro: IPR021050 This family of proteins is found in bacteria. Proteins in this family are approximately 140 amino acids in length. This family is the fourth subunit of the cytochrome c oxidase complex. This subunit does not have a catalytic capacity but instead, is required for assembly and/or stability of the complex []. ; GO: 0004129 cytochrome-c oxidase activity, 0055114 oxidation-reduction process, 0016021 integral to membrane
Probab=24.59 E-value=9.5e+02 Score=26.62 Aligned_cols=54 Identities=13% Similarity=-0.073 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHhhheecccCCc-----------ccccccccCchhHHHHHHHHHHHHHHHHHHH
Q 000272 1505 VGLYIAVMILTMKWGRRVRGYENSL-----------EQYGLDITSLPKVQNFLKGLIAGVMLVLLIQ 1560 (1744)
Q Consensus 1505 vgLyla~lILl~lW~~r~~~~~~pl-----------~slGL~~~~~~~~r~ll~GLllGvlli~lv~ 1560 (1744)
+...+++++-.+++...|+.+.+|= -++|+-.+. .+..+..+++.+++.+.+++
T Consensus 43 ls~~l~~mig~yl~~~~rr~~~rPED~~daEI~dgAGe~GfFsP~--SwWPl~la~~~al~~lGla~ 107 (137)
T PF12270_consen 43 LSGGLALMIGFYLRFTARRIGPRPEDREDAEIADGAGELGFFSPH--SWWPLVLAAAAALVFLGLAF 107 (137)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCCccccccccccCCCCcCcCCCc--cHhHHHHHHHHHHHHHHHHH
Confidence 3334445555666666555444432 246654433 45666666666665555544
No 356
>KOG1287 consensus Amino acid transporters [Amino acid transport and metabolism]
Probab=24.53 E-value=1.5e+03 Score=29.82 Aligned_cols=32 Identities=19% Similarity=0.173 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccCC
Q 000272 1543 QNFLKGLIAGVMLVLLIQSLNAVLGCVSFSWP 1574 (1744)
Q Consensus 1543 r~ll~GLllGvlli~lv~li~~llG~i~~~~~ 1574 (1744)
|.+-..+.+|+.++.+++.+.-+.....+..+
T Consensus 235 ktLP~Ai~isi~lvt~iYil~NvAy~~vls~~ 266 (479)
T KOG1287|consen 235 RTLPRAILISIPLVTVIYVLVNVAYFTVLSPD 266 (479)
T ss_pred ccchHHHHHhhHHHHHHHHHhHhheeEecCHH
Confidence 45556777788888887777666555444433
No 357
>PLN02893 Cellulose synthase-like protein
Probab=24.46 E-value=9e+02 Score=33.40 Aligned_cols=45 Identities=22% Similarity=0.276 Sum_probs=25.5
Q ss_pred CCCccccCCeEEecC----CCCCCCcccccccccCCCCCchhhHHHHHHHHHHH
Q 000272 1111 DADKFIEPPYVILDT----DKKQEPFAEYEMKDNMNENDEDTSAELIGFVKNII 1160 (1744)
Q Consensus 1111 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1160 (1744)
.+|-+.|||-++..| =--.+|+++...-= .||+...|+.|---+-
T Consensus 109 TaDP~~Epp~~~~ntvLSilA~dyp~~kls~Yv-----SDDGgs~lt~~al~Ea 157 (734)
T PLN02893 109 TADPYKEPPMGVVNTALSVMAYDYPTEKLSVYV-----SDDGGSKLTLFAFMEA 157 (734)
T ss_pred cCCcccCchHHHHHHHHHHHhhccCccceEEEE-----ecCCccHHHHHHHHHH
Confidence 578889999877655 00114553332211 5777777776654443
No 358
>PF02313 Fumarate_red_D: Fumarate reductase subunit D; InterPro: IPR003418 Fumarate reductase is a membrane-bound flavoenzyme consisting of four subunits, A-B. A and B comprise the membrane-extrinsic catalytic domain and C and D link the catalytic centres to the electron-transport chain. This family consists of the 13kDa hydrophobic subunit D. This component may be required to anchor the catalytic components of the fumarate reductase complex to the cytoplasmic membrane.; GO: 0006106 fumarate metabolic process, 0016020 membrane; PDB: 3P4R_P 1KF6_P 3P4Q_P 3P4S_D 3CIR_P 2B76_D 1L0V_P 3P4P_D 1KFY_P.
Probab=24.46 E-value=4.4e+02 Score=28.38 Aligned_cols=98 Identities=27% Similarity=0.331 Sum_probs=48.8
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHhhhhhhhh--ccCCCCCc---hhhHHH--HHHHHHHHHHHHHHHHhhheecccCCc
Q 000272 1457 DRPLLQRILGFVGMVLVLWSPVLVPLLPTIVQ--SWTTNNPS---RIAEFA--CIVGLYIAVMILTMKWGRRVRGYENSL 1529 (1744)
Q Consensus 1457 ~~P~~~rIllFllmllllwlPvaI~llp~Ll~--~~~~~~p~---~i~~l~--~lvgLyla~lILl~lW~~r~~~~~~pl 1529 (1744)
+.|.+.-+..--.|+..++.|+.|++.- ++. .+.+.... .+..+. -+..+++..++.+.+|-...|-+ ..+
T Consensus 9 ~EPi~W~LFgAGGm~~Al~~PvlILi~G-illPlG~~~~~a~sy~~i~~f~~~~~g~l~ll~~i~lplwha~HRi~-h~l 86 (118)
T PF02313_consen 9 DEPIFWGLFGAGGMWSALFGPVLILILG-ILLPLGILPPEALSYERILAFAQSWIGKLFLLGVIALPLWHAAHRIH-HGL 86 (118)
T ss_dssp SHHHHHHHHHHHHHHHHHTHHHHHHHHH-TTCCCT-SSTTTTSHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH-HHH
T ss_pred CCCceeeeecchHHHHHHHHHHHHHHHH-HHhcccCCCcccCCHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 3466666666677888888888886653 222 23332211 222221 12233444455566666644433 347
Q ss_pred ccccccccCchhHHHHHHHHHHHHHHHHH
Q 000272 1530 EQYGLDITSLPKVQNFLKGLIAGVMLVLL 1558 (1744)
Q Consensus 1530 ~slGL~~~~~~~~r~ll~GLllGvlli~l 1558 (1744)
.++++.... ..+..+.|++.-+.++.+
T Consensus 87 HDl~ih~g~--~~~~~~YG~A~l~svva~ 113 (118)
T PF02313_consen 87 HDLKIHVGP--AGKWVCYGLAALGSVVAL 113 (118)
T ss_dssp HHTT----T--THHHHHHHHHHHHHHHHH
T ss_pred hcccccccc--chhhHHHHHHHHHHHHHH
Confidence 788887643 456666666554444433
No 359
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=24.39 E-value=2.2e+02 Score=34.19 Aligned_cols=94 Identities=19% Similarity=0.250 Sum_probs=54.2
Q ss_pred hHHHHHhhcCCchhhHHHHHHHhHhcCCcchHHHHHHHHHHHHHHHHhcCCcchHHHHHHhHHhhhhheeecccceeecC
Q 000272 1619 LPEEIAADLDYHRGIIISGLAFALSQRSPQAIPGLWLLSLALAGVRQRSQGSLSVPIGLRTGIMASSFVLQKGGLLTYKP 1698 (1744)
Q Consensus 1619 L~~~L~~~~g~~~AIIISSLLFALlHlsl~~~i~lfLlGLvLa~aylrttGSLWlpIGLHagWn~~~~~l~vgGLl~~~~ 1698 (1744)
+...+.....+++-.++++++++.-.+....++.. +||.++.. ||.++-+=.||-++-|++ +...+
T Consensus 44 ~v~~~~~~p~f~p~amlgG~lW~~gN~~~vpii~~--iGLglg~l-------iW~s~n~l~Gw~~grfGl-----Fg~~~ 109 (254)
T PF07857_consen 44 VVNLILGFPPFYPWAMLGGALWATGNILVVPIIKT--IGLGLGML-------IWGSVNCLTGWASGRFGL-----FGLDP 109 (254)
T ss_pred HHHHhcCCCcceeHHHhhhhhhhcCceeehhHhhh--hhhHHHHH-------HHHHHHHHHHHHHhhcee-----ccccc
Confidence 33333333456777888999999877644444444 45555542 788888888998765532 22222
Q ss_pred CCCceeecCCCCCcchhHHHHHHHHHHHHHhhccCc
Q 000272 1699 SLPLWITGTHPFQPFSGVVGLAFSLILAIILYPRQP 1734 (1744)
Q Consensus 1699 ~gp~WLTGg~~fgPeaGliGlv~llliaiil~~~k~ 1734 (1744)
..+. .|.-..+|++++++-.+++.+.|+
T Consensus 110 ~~~~--------~~~Ln~~G~~l~~~~~~~f~fik~ 137 (254)
T PF07857_consen 110 QVPS--------SPWLNYIGVALVLVSGIIFSFIKS 137 (254)
T ss_pred cccc--------hhHHHHHHHHHHHHHHHheeeecC
Confidence 2111 223345676666655555555665
No 360
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=24.13 E-value=1.7e+03 Score=29.17 Aligned_cols=189 Identities=13% Similarity=0.088 Sum_probs=0.0
Q ss_pred cchhHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCCCCchhhHHHHHHHHHHHHHHHHHHHhhhe
Q 000272 1443 MSLTEKLILFLHLADRPLLQRILGFVGMVLVLWSPVLVPLLPTIVQSWTTNNPSRIAEFACIVGLYIAVMILTMKWGRRV 1522 (1744)
Q Consensus 1443 ~slt~~~~~~~~~~~~P~~~rIllFllmllllwlPvaI~llp~Ll~~~~~~~p~~i~~l~~lvgLyla~lILl~lW~~r~ 1522 (1744)
+.++=+-..-..++++|+...++.+++.+....+--.+..+ ..+.................+....+.++++-+..++
T Consensus 221 ~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~y--y~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~ 298 (467)
T COG2211 221 VKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVY--YVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKK 298 (467)
T ss_pred ccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhhe--eEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q ss_pred ecccCCcccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCccccchhhHHHHHHHhhhhHHHHHHHHH
Q 000272 1523 RGYENSLEQYGLDITSLPKVQNFLKGLIAGVMLVLLIQSLNAVLGCVSFSWPSIVTSSLTAMAWLKVYGNISMLACQGIV 1602 (1744)
Q Consensus 1523 ~~~~~pl~slGL~~~~~~~~r~ll~GLllGvlli~lv~li~~llG~i~~~~~~~~~s~~~~~~ll~~~~~~~~lil~~ll 1602 (1744)
+++++ -+.+|.++.++..++.++++. .+...+++..++
T Consensus 299 ~gkk~--------------------~~~~~~~~~~i~~~~~~f~~~----------------------~~~~l~~~~~~i 336 (467)
T COG2211 299 FGKKK--------------------LFLIGLLLLAVGYLLLYFTPA----------------------GSVVLIVVALII 336 (467)
T ss_pred hchHH--------------------HHHHHHHHHHHHHHHHHhhcC----------------------cchHHHHHHHHH
Q ss_pred HHHHHHHH-----------------------HHHHHHHhhHHHHHhhcCCchhhHHHHHHHhHhcCCcch--HHHHHHHH
Q 000272 1603 TATVVVLV-----------------------EELLFRSWLPEEIAADLDYHRGIIISGLAFALSQRSPQA--IPGLWLLS 1657 (1744)
Q Consensus 1603 lallv~l~-----------------------EELLFRG~L~~~L~~~~g~~~AIIISSLLFALlHlsl~~--~i~lfLlG 1657 (1744)
..+..++. |=++|=+ ..+.++++...|..+.+++.+..+..... =..-.+.|
T Consensus 337 ~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~---~tF~~K~g~ala~~~~g~~L~~~Gyv~~~~~Q~~~al~g 413 (467)
T COG2211 337 AGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSG---MTFFRKLGLALAGFIPGWILGAIGYVPNVSAQSASALFG 413 (467)
T ss_pred HHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHH---HHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHH
Q ss_pred HHHHHHHHhcCCcchHHHHHHhHHhhhhh
Q 000272 1658 LALAGVRQRSQGSLSVPIGLRTGIMASSF 1686 (1744)
Q Consensus 1658 LvLa~aylrttGSLWlpIGLHagWn~~~~ 1686 (1744)
+.+.. .|+|.++|..-.+.+.
T Consensus 414 I~~~~--------~~~Pa~l~l~~~i~~~ 434 (467)
T COG2211 414 IRFLF--------IILPALLLLLAAIIIF 434 (467)
T ss_pred HHHHH--------HHHHHHHHHHHHHHHH
No 361
>COG3125 CyoD Heme/copper-type cytochrome/quinol oxidase, subunit 4 [Energy production and conversion]
Probab=24.04 E-value=8.2e+02 Score=26.21 Aligned_cols=24 Identities=25% Similarity=0.433 Sum_probs=21.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhh
Q 000272 1460 LLQRILGFVGMVLVLWSPVLVPLL 1483 (1744)
Q Consensus 1460 ~~~rIllFllmllllwlPvaI~ll 1483 (1744)
.+.-+++|++.+++..+|+.....
T Consensus 17 ~k~y~iGFvLsIiLT~ipF~~vm~ 40 (111)
T COG3125 17 LKSYLIGFVLSIILTLIPFWVVMT 40 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 677789999999999999998766
No 362
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=23.92 E-value=6.4e+02 Score=32.62 Aligned_cols=18 Identities=17% Similarity=0.484 Sum_probs=11.6
Q ss_pred HHHhhcCCchhhHHHHHH
Q 000272 1622 EIAADLDYHRGIIISGLA 1639 (1744)
Q Consensus 1622 ~L~~~~g~~~AIIISSLL 1639 (1744)
.|.++.++++|-+++|+.
T Consensus 344 SlSEhi~F~~AYliAa~a 361 (430)
T PF06123_consen 344 SLSEHIGFNLAYLIAALA 361 (430)
T ss_pred HHHhhhchHHHHHHHHHH
Confidence 455566777777777653
No 363
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=23.55 E-value=1.3e+02 Score=33.48 Aligned_cols=38 Identities=11% Similarity=0.149 Sum_probs=30.8
Q ss_pred cEEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCC
Q 000272 217 TTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPR 254 (1744)
Q Consensus 217 P~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~R 254 (1744)
|.||++-|+.|+..+.--+.+...|.+.|+.|+++|-.
T Consensus 2 g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDgD 39 (156)
T PF01583_consen 2 GFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDGD 39 (156)
T ss_dssp -EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecCc
Confidence 67999999987777767788888999999999999853
No 364
>PRK11715 inner membrane protein; Provisional
Probab=23.32 E-value=7.1e+02 Score=32.30 Aligned_cols=18 Identities=17% Similarity=0.456 Sum_probs=12.0
Q ss_pred HHHhhcCCchhhHHHHHH
Q 000272 1622 EIAADLDYHRGIIISGLA 1639 (1744)
Q Consensus 1622 ~L~~~~g~~~AIIISSLL 1639 (1744)
.|.+..|++.|-+++|+.
T Consensus 350 SlSEHigF~~AYliAa~a 367 (436)
T PRK11715 350 SLSEHIGFTLAYLIAALA 367 (436)
T ss_pred HHHhhhchHHHHHHHHHH
Confidence 455666777777777654
No 365
>COG4452 CreD Inner membrane protein involved in colicin E2 resistance [Defense mechanisms]
Probab=23.11 E-value=1.2e+03 Score=29.75 Aligned_cols=25 Identities=16% Similarity=0.138 Sum_probs=14.8
Q ss_pred hhhHHHHHHHHHHHHHhhHhheecC
Q 000272 1179 EMESDLARDLERVATDISLAIVHDE 1203 (1744)
Q Consensus 1179 ~~~~~~~~~~~~~~~~~~~~~~~~~ 1203 (1744)
.|=+.|-+|=-..++.|+.+|-.+.
T Consensus 25 ~li~~li~eRa~~r~~v~~~I~~s~ 49 (443)
T COG4452 25 LLIRGLIDERADYRSDVIDAIANST 49 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3445566666666666666665543
No 366
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=23.06 E-value=1.9e+03 Score=31.53 Aligned_cols=17 Identities=29% Similarity=0.595 Sum_probs=9.9
Q ss_pred HhhccccccchhHHHHH
Q 000272 1435 LWGGLRGAMSLTEKLIL 1451 (1744)
Q Consensus 1435 ~~~~~~~~~slt~~~~~ 1451 (1744)
||.|..+-|++-.||.-
T Consensus 800 l~~g~~~~L~l~QRL~Y 816 (1044)
T PLN02915 800 LWYAYGGKLKWLERLAY 816 (1044)
T ss_pred cccccCCCCCHHHHHHH
Confidence 55565555676666543
No 367
>TIGR01185 devC DevC protein. This model describes a predicted membrane subunit, DevC, of an ABC transporter known so far from two species of cyanobacteria. Some experimental data from mutational analysis suggest that this protein along with DevA and DevB encoded in the same operon may be involved in the transport/export of glycolipids.
Probab=23.00 E-value=2.5e+02 Score=35.26 Aligned_cols=11 Identities=18% Similarity=0.314 Sum_probs=7.2
Q ss_pred CCccccccccc
Q 000272 1527 NSLEQYGLDIT 1537 (1744)
Q Consensus 1527 ~pl~slGL~~~ 1537 (1744)
.-++.+|.+.+
T Consensus 292 giLrAlGa~~~ 302 (380)
T TIGR01185 292 ATLKAIGYTQK 302 (380)
T ss_pred HHHHHhCCCHH
Confidence 44677887654
No 368
>PLN02189 cellulose synthase
Probab=22.98 E-value=9.6e+02 Score=34.32 Aligned_cols=43 Identities=19% Similarity=0.067 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhcCCchhhHHHHHHHhHhcC
Q 000272 1602 VTATVVVLVEELLFRSWLPEEIAADLDYHRGIIISGLAFALSQR 1645 (1744)
Q Consensus 1602 llallv~l~EELLFRG~L~~~L~~~~g~~~AIIISSLLFALlHl 1645 (1744)
+...+..+.| +...|.=.+.+-+.-..|.-.-+||-+||+++.
T Consensus 861 ~~~~~~~llE-~~~sG~s~~~WWrnQq~w~I~~~Sa~Lfavl~~ 903 (1040)
T PLN02189 861 MSIFATGILE-LRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQG 903 (1040)
T ss_pred HHHHHHHHHH-HHhcCCcHHHHhhhhhHHHHhhhHHHHHHHHHH
Confidence 3334457777 888887766655555567766778888888775
No 369
>TIGR02921 PEP_integral PEP-CTERM family integral membrane protein. Members of this protein family, found in three different species so far, have a PEP-CTERM sequence at the carboxyl-terminus (see model TIGR02595), but are unusual among PEP-CTERM proteins in having multiple predicted transmembrane segments. The function is unknown. It is proposed that a member of the EpsH family, to be designated exosortase (see TIGR02602), recognizes and cleaves PEP-CTERM proteins in a manner analogous to the cleavage of LPXTG proteins by sortase (see Haft, et al., 2006).
Probab=22.86 E-value=1.3e+03 Score=31.20 Aligned_cols=31 Identities=29% Similarity=0.438 Sum_probs=18.3
Q ss_pred cchhhhhHHHHHhhccccccchhHHHHHHHHh
Q 000272 1424 GLLKLVGKLALLWGGLRGAMSLTEKLILFLHL 1455 (1744)
Q Consensus 1424 ~~~~~~~~~~~~~~~~~~~~slt~~~~~~~~~ 1455 (1744)
|||-|+|--|+| |-.||-.+.---+.+-+++
T Consensus 27 ~i~pf~~~p~i~-~~~~g~~~~~~a~~~i~li 57 (952)
T TIGR02921 27 GILPFFGLPAIL-AAAIGDHPIEFALALILLI 57 (952)
T ss_pred hhhhccccHHHH-HHHcccchHHHHHHHHHHH
Confidence 577777765554 5566766665555544443
No 370
>TIGR02916 PEP_his_kin putative PEP-CTERM system histidine kinase. Members of this protein family have a novel N-terminal domain, a single predicted membrane-spanning helix, and a predicted cystosolic histidine kinase domain. We designate this protein PrsK, and its companion DNA-binding response regulator protein (TIGR02915) PrsR. These predicted signal-transducing proteins appear to enable enhancer-dependent transcriptional activation. The prsK gene is often associated with exopolysaccharide biosynthesis genes.
Probab=22.67 E-value=2e+03 Score=29.35 Aligned_cols=33 Identities=18% Similarity=0.269 Sum_probs=16.3
Q ss_pred HHHHHHHHhhHHHHHhhcCCchhhHHHHHHHhHh
Q 000272 1610 VEELLFRSWLPEEIAADLDYHRGIIISGLAFALS 1643 (1744)
Q Consensus 1610 ~EELLFRG~L~~~L~~~~g~~~AIIISSLLFALl 1643 (1744)
..=++||++-...+.. -|...+++...+++++.
T Consensus 181 ~~~~l~~~~~~~~~~~-rg~~~~~~~~~~~~~~~ 213 (679)
T TIGR02916 181 ADALLFRRLDTDVWPA-RGLVAALVVPLIAVSAA 213 (679)
T ss_pred HHHHHhccCChhHHHH-HHHHHHHHHHHHHHHHh
Confidence 3344666655444331 23344555555556655
No 371
>PF06626 DUF1152: Protein of unknown function (DUF1152); InterPro: IPR010581 This family consists of several hypothetical archaeal proteins of unknown function.
Probab=22.67 E-value=1.1e+02 Score=37.32 Aligned_cols=41 Identities=32% Similarity=0.567 Sum_probs=32.3
Q ss_pred hhhcccCCccccCCCCcchHHHHHHHHHhhcccCcchhhhhHHHHHhhccccccchhHH
Q 000272 1390 KAMSVASPVVPTKEDGEVDQERLVAMLADLGQKGGLLKLVGKLALLWGGLRGAMSLTEK 1448 (1744)
Q Consensus 1390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~slt~~ 1448 (1744)
+-..|+||= -|||++++-+...+|++.++||+| |+.|||..
T Consensus 159 ~~l~v~G~G----~DgeL~~~~vl~riaeia~~GG~L--------------G~~~l~~~ 199 (297)
T PF06626_consen 159 VILAVIGFG----VDGELSHDYVLERIAEIARKGGYL--------------GAFSLSRE 199 (297)
T ss_pred eEEEEEeCC----cCCCCCHHHHHHHHHHHHHcCCcc--------------ccccCCHH
Confidence 334566664 489999999999999999998765 77788754
No 372
>TIGR03480 HpnN hopanoid biosynthesis associated RND transporter like protein HpnN. The genomes containing members of this family share the machinery for the biosynthesis of hopanoid lipids. Furthermore, the genes of this family are usually located proximal to other components of this biological process. The proteins appear to be related to the RND family of export proteins, particularly the hydrophobe/amphiphile efflux-3 (HAE3) family represented by TIGR00921.
Probab=22.60 E-value=1.7e+03 Score=31.22 Aligned_cols=15 Identities=7% Similarity=-0.219 Sum_probs=7.3
Q ss_pred HHHHHHHHHHHHHHH
Q 000272 1650 IPGLWLLSLALAGVR 1664 (1744)
Q Consensus 1650 ~i~lfLlGLvLa~ay 1664 (1744)
+.....+|++++++.
T Consensus 397 lg~~~~~gv~~s~l~ 411 (862)
T TIGR03480 397 LGIIAGTGMFIALFV 411 (862)
T ss_pred HHHHHHHHHHHHHHH
Confidence 334445555555543
No 373
>PRK11281 hypothetical protein; Provisional
Probab=22.55 E-value=6e+02 Score=36.69 Aligned_cols=48 Identities=13% Similarity=0.121 Sum_probs=32.9
Q ss_pred CCCcchHHHHHHHHHhhcccCcchhhhhHHHHHhhccccccchhHHHH
Q 000272 1403 EDGEVDQERLVAMLADLGQKGGLLKLVGKLALLWGGLRGAMSLTEKLI 1450 (1744)
Q Consensus 1403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~slt~~~~ 1450 (1744)
|+-.+|-|++.+-+-.|-.--.++-+++=+-.+|+-+-.+.+.||-.-
T Consensus 770 ee~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~~~l~~i~ 817 (1113)
T PRK11281 770 EEPTLALEQVNQQSLRLTDLLLFALFFVMFYWVWSDLITVFSYLDSIT 817 (1113)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 445799999988777665544444455556668888888888877433
No 374
>PF14184 YrvL: Regulatory protein YrvL
Probab=22.52 E-value=5.4e+02 Score=28.06 Aligned_cols=37 Identities=16% Similarity=0.055 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhcCCchhhHHHH
Q 000272 1601 IVTATVVVLVEELLFRSWLPEEIAADLDYHRGIIISG 1637 (1744)
Q Consensus 1601 lllallv~l~EELLFRG~L~~~L~~~~g~~~AIIISS 1637 (1744)
++++++.++.=|++++..+......+.+.|.+.+.-.
T Consensus 46 ~li~~~lg~~~e~~~k~l~~~l~~~~~~~~~~~~l~~ 82 (132)
T PF14184_consen 46 FLIIFVLGLPFELFEKVLLKALLFLRMSRRLFILLAF 82 (132)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCchHHHHHHHH
Confidence 3445556888999999999887777788888777766
No 375
>PF03176 MMPL: MMPL family; InterPro: IPR004869 Proteins of this entry are putative integral membrane proteins from bacteria. Several of the members are mycobacterial proteins. Many of the proteins contain two copies of this aligned region. The function of these proteins is not known, although it has been suggested that they may be involved in lipid transport [].; GO: 0016020 membrane
Probab=22.20 E-value=1.4e+03 Score=27.55 Aligned_cols=46 Identities=11% Similarity=0.014 Sum_probs=25.0
Q ss_pred chhhHHHHHHHhHhcC----CcchHHHHHHHHHHHHHHHHhcCCcchHHHHHHh
Q 000272 1630 HRGIIISGLAFALSQR----SPQAIPGLWLLSLALAGVRQRSQGSLSVPIGLRT 1679 (1744)
Q Consensus 1630 ~~AIIISSLLFALlHl----sl~~~i~lfLlGLvLa~aylrttGSLWlpIGLHa 1679 (1744)
..+.+.+.+-|+.+=+ .+.+|-.+..+|++++++... +.+|..++.
T Consensus 252 ~~s~ltt~~gf~~L~~s~~~~~~~~G~~~~~gi~~~~l~~l----~llPall~~ 301 (333)
T PF03176_consen 252 LLSALTTAIGFGSLLFSPFPPLRQFGLLAAIGILIALLLSL----TLLPALLSL 301 (333)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHH
Confidence 3455555555655444 233444455677777776655 344655553
No 376
>PRK10582 cytochrome o ubiquinol oxidase subunit IV; Provisional
Probab=22.15 E-value=9.7e+02 Score=25.50 Aligned_cols=24 Identities=13% Similarity=0.283 Sum_probs=20.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhh
Q 000272 1460 LLQRILGFVGMVLVLWSPVLVPLL 1483 (1744)
Q Consensus 1460 ~~~rIllFllmllllwlPvaI~ll 1483 (1744)
...-+++|++.+++..+|+.+...
T Consensus 15 ~k~yviGFiLSliLT~i~F~lv~~ 38 (109)
T PRK10582 15 VKTYMTGFILSIILTVIPFWMVMT 38 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456789999999999999998765
No 377
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form. This model is specific for the bacterial members of this family.
Probab=22.07 E-value=66 Score=42.01 Aligned_cols=50 Identities=28% Similarity=0.309 Sum_probs=0.0
Q ss_pred HHHHHhhccccccchhHHHHHHHHh-hcCchhHHHHHHHHHHHHHHHHHHH
Q 000272 1431 KLALLWGGLRGAMSLTEKLILFLHL-ADRPLLQRILGFVGMVLVLWSPVLV 1480 (1744)
Q Consensus 1431 ~~~~~~~~~~~~~slt~~~~~~~~~-~~~P~~~rIllFllmllllwlPvaI 1480 (1744)
++.+-|+|+||++||.=-|..-..+ ...|.+.|=.+.++.+.++.+.+.+
T Consensus 345 ~~v~~w~G~RG~vslA~al~~p~~~~~g~~~p~r~~i~~~~~~vVl~Tllv 395 (525)
T TIGR00831 345 KHVVSWAGLRGAIPLALALSFPNQLLSGMAFPARYELVFLAAGVILFSLLV 395 (525)
T ss_pred HHHheeccchHHHHHHHHHHccccccCCCCCchHHHHHHHHHHHHHHHHHH
No 378
>KOG1965 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism]
Probab=22.03 E-value=7e+02 Score=33.37 Aligned_cols=191 Identities=18% Similarity=0.146 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhheecccCCcccccccccCchhHHHHHHHHHHHHHHHHHH----------------HHHH
Q 000272 1500 EFACIVGLYIAVMILTMKWGRRVRGYENSLEQYGLDITSLPKVQNFLKGLIAGVMLVLLI----------------QSLN 1563 (1744)
Q Consensus 1500 ~l~~lvgLyla~lILl~lW~~r~~~~~~pl~slGL~~~~~~~~r~ll~GLllGvlli~lv----------------~li~ 1563 (1744)
+..++..+.+.++.++..|..+.++ ++|-. .....+++|+++|+++.... ....
T Consensus 34 ~~al~~~i~lL~l~iv~~hll~~~R---------~~~l~-Esv~~l~iGl~vG~vi~~~~~~~s~~~~~~~~f~~~~ff~ 103 (575)
T KOG1965|consen 34 SVALLFFILLLVLCIVLGHLLEETR---------FRWLP-ESVAALFIGLLVGLVIRYSSGGKSSRGKRILVFSPDLFFL 103 (575)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc---------ccccc-hHHHHHHHHHHHHHHhhhcCCCcccccceeEEecccHHHH
Q ss_pred HHhhcccccCCccccchhhHHHHHHHhhhhHHHHHHHHHHHHHH-HHHHHHHHHHhhHHHHHhhcCCchhhHHHH-----
Q 000272 1564 AVLGCVSFSWPSIVTSSLTAMAWLKVYGNISMLACQGIVTATVV-VLVEELLFRSWLPEEIAADLDYHRGIIISG----- 1637 (1744)
Q Consensus 1564 ~llG~i~~~~~~~~~s~~~~~~ll~~~~~~~~lil~~lllallv-~l~EELLFRG~L~~~L~~~~g~~~AIIISS----- 1637 (1744)
+++-.+-+.... +.+...++....++..+.+.+..+...+ +..==+++-|.+...+-=.--...+.++||
T Consensus 104 vLLPpiif~sgy----~l~k~~fF~n~~si~~fa~~Gt~IS~~~ig~gv~~~~~~~~~~~~~f~d~L~fGaliSATDPVt 179 (575)
T KOG1965|consen 104 VLLPPIIFNSGY----SLKKKQFFRNIGSILLFAIFGTFISAVIIGAGVYLLGFGLLIYDLSFKDCLAFGALISATDPVT 179 (575)
T ss_pred Hhhchhhhcccc----eechhhhhhhhHHHHHhhhcceeeehhHHhhHHHHHhcccccccccHHHHHHHhhHhcccCchH
Q ss_pred --HHHhHhcC---------------------------------------------CcchHHHHHHHHHHHH--------H
Q 000272 1638 --LAFALSQR---------------------------------------------SPQAIPGLWLLSLALA--------G 1662 (1744)
Q Consensus 1638 --LLFALlHl---------------------------------------------sl~~~i~lfLlGLvLa--------~ 1662 (1744)
.||=-+|. .+..|.+-+++|+..| .
T Consensus 180 vLaIfnel~vd~~Ly~LVFGESvLNDAvsIVlf~~i~~~~~~~~~~~~~~~~ig~Fl~~F~gS~~lGv~~GlisA~~lK~ 259 (575)
T KOG1965|consen 180 VLAIFNELGVDPKLYTLVFGESVLNDAVSIVLFNTIQKFQLGSLNDWTAFSAIGNFLYTFFGSLGLGVAIGLISALVLKF 259 (575)
T ss_pred HHHHHHHhCCCcceeeeeecchhccchhHHHHHHHHHHHccCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHhcCCcchHHHHHHhHHhhhhheeecccceeecCCCCceeecCCCCCcchhHHHHHHHHHH
Q 000272 1663 VRQRSQGSLSVPIGLRTGIMASSFVLQKGGLLTYKPSLPLWITGTHPFQPFSGVVGLAFSLIL 1725 (1744)
Q Consensus 1663 aylrttGSLWlpIGLHagWn~~~~~l~vgGLl~~~~~gp~WLTGg~~fgPeaGliGlv~llli 1725 (1744)
.+.|.+=++-.++.++.+|.--.+. +. ++ .+|++++++|++.
T Consensus 260 ~~l~~~~~lE~al~ll~sY~sY~lA-E~-------------------~~-lSGIvtVlFcGI~ 301 (575)
T KOG1965|consen 260 LYLRRTPSLESALMLLMSYLSYLLA-EG-------------------CG-LSGIVTVLFCGIV 301 (575)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHHHH-HH-------------------hc-chhHHHHHHHHHH
No 379
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.98 E-value=2.3e+02 Score=35.39 Aligned_cols=9 Identities=56% Similarity=0.859 Sum_probs=4.1
Q ss_pred cccccccce
Q 000272 1244 YLRRVLPVG 1252 (1744)
Q Consensus 1244 ~~~~~~~~~ 1252 (1744)
|||..-|+|
T Consensus 27 ~~r~~~p~~ 35 (372)
T KOG2927|consen 27 YLRFNKPTG 35 (372)
T ss_pred HHHhcCCcC
Confidence 444444443
No 380
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=21.60 E-value=6.9e+02 Score=28.75 Aligned_cols=19 Identities=11% Similarity=-0.136 Sum_probs=7.3
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 000272 1542 VQNFLKGLIAGVMLVLLIQ 1560 (1744)
Q Consensus 1542 ~r~ll~GLllGvlli~lv~ 1560 (1744)
+..++.+.++-++++.++.
T Consensus 79 ~~~~ld~~L~~~~if~~~~ 97 (206)
T PF06570_consen 79 WLMALDNSLLFFGIFSLLF 97 (206)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3344444333333333333
No 381
>TIGR03434 ADOP Acidobacterial duplicated orphan permease. Members of this protein family are found, so far, only in three species of Acidobacteria, namely Acidobacteria bacterium Ellin345, Acidobacterium capsulatum ATCC 51196, and Solibacter usitatus Ellin6076, where they form large paralogous families. Each protein contains two copies of a domain called the efflux ABC transporter permease protein (pfam02687). However, unlike other members of that family (including LolC, FtsX, and MacB), genes for these proteins are essentially never found fused or adjacent to ABC transporter ATP-binding protein (pfam00005) genes. We name this family ADOP, for Acidobacterial Duplicated Orphan Permease, to reflect the restricted lineage, internal duplication, lack of associated ATP-binding cassette proteins, and permease homology. The function is unknown.
Probab=21.59 E-value=4.1e+02 Score=36.14 Aligned_cols=16 Identities=25% Similarity=0.308 Sum_probs=10.8
Q ss_pred cceeeehhHHHHhhhhcc
Q 000272 1250 PVGVIAGSCLAALREYFN 1267 (1744)
Q Consensus 1250 ~~~~~~~~~~~~~~~~~~ 1267 (1744)
|-.||++-.+| ++||.
T Consensus 143 ~~~~vis~~~a--~~~F~ 158 (803)
T TIGR03434 143 PPVVVLSYALW--QRRFG 158 (803)
T ss_pred CCEEEEcHHHH--HHHhC
Confidence 45567777776 77774
No 382
>PF05987 DUF898: Bacterial protein of unknown function (DUF898); InterPro: IPR010295 This family consists of several bacterial proteins of unknown function. Some of the family, including YjgN, are putative transmembrane proteins.
Probab=21.49 E-value=1.7e+03 Score=27.97 Aligned_cols=15 Identities=7% Similarity=0.045 Sum_probs=8.7
Q ss_pred cccCCcccccccccC
Q 000272 1524 GYENSLEQYGLDITS 1538 (1744)
Q Consensus 1524 ~~~~pl~slGL~~~~ 1538 (1744)
..+..|+.+.|.++.
T Consensus 112 ~~~T~~rgvRF~f~g 126 (338)
T PF05987_consen 112 ARRTSWRGVRFGFDG 126 (338)
T ss_pred HhhCcccCeeeEEeC
Confidence 335556666666554
No 383
>PLN00151 potassium transporter; Provisional
Probab=21.46 E-value=1.4e+03 Score=32.09 Aligned_cols=36 Identities=14% Similarity=0.113 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHhhHHHHHhhcCCchhhHHHHHHHhHhcC
Q 000272 1607 VVLVEELLFRSWLPEEIAADLDYHRGIIISGLAFALSQR 1645 (1744)
Q Consensus 1607 v~l~EELLFRG~L~~~L~~~~g~~~AIIISSLLFALlHl 1645 (1744)
.++.|=++|=.-++.. .-|-|+.+++++++|.+|-.
T Consensus 536 F~~ie~~f~sA~l~Ki---~~GGW~Pl~la~v~~~iM~~ 571 (852)
T PLN00151 536 FLSVELVFFSSVLSSV---GDGGWIPLVFASVFLCIMYI 571 (852)
T ss_pred HHHHHHHHHHHHHHhh---cCCCcHHHHHHHHHHHHHHH
Confidence 3555655554444432 34789999999999988754
No 384
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=21.42 E-value=4e+02 Score=31.38 Aligned_cols=38 Identities=18% Similarity=0.335 Sum_probs=28.4
Q ss_pred EEEEEcCCCCCchhHHHHHHHHHHHhCCcEEEEEcCCC
Q 000272 218 TLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRG 255 (1744)
Q Consensus 218 ~VVLLHGltGGS~~sYIr~La~~La~~GYrVVVfD~RG 255 (1744)
++++++|+..|....+...+++.|.++|+.|.++...+
T Consensus 2 il~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 39 (360)
T cd04951 2 ILYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTG 39 (360)
T ss_pred eEEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeC
Confidence 35666765445666778889999999999998886544
No 385
>PLN03159 cation/H(+) antiporter 15; Provisional
Probab=21.31 E-value=2.4e+03 Score=29.82 Aligned_cols=8 Identities=13% Similarity=0.542 Sum_probs=3.9
Q ss_pred cchhhHHH
Q 000272 1380 QDNIVTSL 1387 (1744)
Q Consensus 1380 ~~~~~~~~ 1387 (1744)
|+-++.-+
T Consensus 67 ~P~ivgeI 74 (832)
T PLN03159 67 QPRVISEI 74 (832)
T ss_pred CChhHHHH
Confidence 55555443
No 386
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=21.08 E-value=6e+02 Score=39.31 Aligned_cols=27 Identities=11% Similarity=0.202 Sum_probs=15.5
Q ss_pred HHHHHhhHHHHHhhcCCchhhHHHHHHHh
Q 000272 1613 LLFRSWLPEEIAADLDYHRGIIISGLAFA 1641 (1744)
Q Consensus 1613 LLFRG~L~~~L~~~~g~~~AIIISSLLFA 1641 (1744)
++.=++++..|..+ ...|.++++++|-
T Consensus 744 ~I~~~fliS~fFsk--a~~A~~~~~li~f 770 (2272)
T TIGR01257 744 TIMQCFLLSTFFSK--ASLAAACSGVIYF 770 (2272)
T ss_pred HHHHHHHHHHHhCc--hHHHHHHHHHHHH
Confidence 44556677777655 3455555665553
No 387
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=20.78 E-value=3e+02 Score=39.26 Aligned_cols=52 Identities=19% Similarity=0.323 Sum_probs=36.0
Q ss_pred HHHHH-HHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHhCCCCCceEEEEec
Q 000272 272 SDDIC-TAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCID 323 (1744)
Q Consensus 272 tdDL~-aaId~LrkryP~spIvLVGhSMGG~IaL~YLae~ge~s~L~AaVlIS 323 (1744)
.+++. ..|+.+++-.|..|.-++|+|+|+.++...+....+......++++.
T Consensus 2164 ies~A~~yirqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillD 2216 (2376)
T KOG1202|consen 2164 IESLAAYYIRQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLD 2216 (2376)
T ss_pred HHHHHHHHHHHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEec
Confidence 34443 34566777778999999999999999988887654433334455553
No 388
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=20.78 E-value=1.4e+02 Score=32.44 Aligned_cols=34 Identities=15% Similarity=0.056 Sum_probs=23.0
Q ss_pred CCCcEEEEEcCCCCCchhHHHHHHHHHHHhCCcE
Q 000272 214 GLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFF 247 (1744)
Q Consensus 214 g~~P~VVLLHGltGGS~~sYIr~La~~La~~GYr 247 (1744)
..+|.|+-+||++|.....--+.+|+.+...|.+
T Consensus 50 p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~~ 83 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGMK 83 (127)
T ss_pred CCCCEEEEeecCCCCcHHHHHHHHHHHHHhcccC
Confidence 4578999999997654433345566677777744
No 389
>TIGR03145 cyt_nit_nrfE cytochrome c nitrate reductase biogenesis protein NrfE. Members of this protein family closely resemble the CcmF protein of the CcmABCDEFGH system, or system I, for c-type cytochrome biogenesis (GenProp0678). Members are found, as a rule, next to closely related paralogs of CcmG and CcmH and always located near other genes associated with the cytochrome c nitrite reductase enzyme complex. As a rule, members are found in species that also encode bona fide members of the CcmF, CcmG, and CcmH families.
Probab=20.72 E-value=2.2e+03 Score=29.24 Aligned_cols=16 Identities=6% Similarity=-0.182 Sum_probs=12.4
Q ss_pred CcchHHHHHHhHHhhh
Q 000272 1669 GSLSVPIGLRTGIMAS 1684 (1744)
Q Consensus 1669 GSLWlpIGLHagWn~~ 1684 (1744)
.+.|.....|.|.-..
T Consensus 481 ~~~~G~~laH~Gval~ 496 (628)
T TIGR03145 481 LRQLGMVLAHLGVAIC 496 (628)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4689999999986433
No 390
>CHL00182 tatC Sec-independent translocase component C; Provisional
Probab=20.71 E-value=1.5e+03 Score=27.16 Aligned_cols=70 Identities=13% Similarity=0.023 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHH-HhhHHHHHhhcCCchhhHHHHHHHhHhcCCcchHHHHHHHHHHHHHHHHhcCCcchHHH
Q 000272 1601 IVTATVVVLVEELLFR-SWLPEEIAADLDYHRGIIISGLAFALSQRSPQAIPGLWLLSLALAGVRQRSQGSLSVPI 1675 (1744)
Q Consensus 1601 lllallv~l~EELLFR-G~L~~~L~~~~g~~~AIIISSLLFALlHlsl~~~i~lfLlGLvLa~aylrttGSLWlpI 1675 (1744)
+.+++-.|+.==++.| |.+-...-++ .+..++++ .+++|.+-...+-.+..+++++-+..+|+- ++|.+.
T Consensus 175 fGl~FelPvi~~~L~~~givs~~~L~~-~Rr~~~v~-~~i~aAiiTP~pD~~sqi~laiPl~lLYEi---sI~i~~ 245 (249)
T CHL00182 175 TGLAFQIPIIQIVLGLLNIISSKQMLS-AWRYVILV-STIVGAILTPSTDPLTQLLLSLAILLLYFS---GVIVLK 245 (249)
T ss_pred HHHHHHHHHHHHHHHHcCCcCHHHHHh-hCchHhHH-HHHHHHHhCCCCcHHHHHHHHHHHHHHHHH---HHHHHH
Confidence 3333334555445555 4443333222 22334433 666676643325778888888888888876 476654
No 391
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=20.66 E-value=8.4e+02 Score=34.42 Aligned_cols=15 Identities=27% Similarity=0.370 Sum_probs=8.3
Q ss_pred CCccccCCCCcchHH
Q 000272 1396 SPVVPTKEDGEVDQE 1410 (1744)
Q Consensus 1396 ~~~~~~~~~~~~~~~ 1410 (1744)
|=+|-.-|||.-|-.
T Consensus 630 g~~va~iGDG~ND~~ 644 (917)
T TIGR01116 630 GEIVAMTGDGVNDAP 644 (917)
T ss_pred CCeEEEecCCcchHH
Confidence 445555566666643
No 392
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=20.03 E-value=2e+03 Score=28.36 Aligned_cols=14 Identities=29% Similarity=0.337 Sum_probs=6.6
Q ss_pred chHHHHHHHHHHHH
Q 000272 1648 QAIPGLWLLSLALA 1661 (1744)
Q Consensus 1648 ~~~i~lfLlGLvLa 1661 (1744)
..++.+|++|+++-
T Consensus 451 ~~l~~lf~~gl~ll 464 (477)
T PF11700_consen 451 LFLLVLFLIGLILL 464 (477)
T ss_pred HHHHHHHHHHHHHH
Confidence 34444555555443
No 393
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=20.02 E-value=1.3e+03 Score=33.20 Aligned_cols=43 Identities=14% Similarity=0.020 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhcCCchhhHHHHHHHhHhcC
Q 000272 1602 VTATVVVLVEELLFRSWLPEEIAADLDYHRGIIISGLAFALSQR 1645 (1744)
Q Consensus 1602 llallv~l~EELLFRG~L~~~L~~~~g~~~AIIISSLLFALlHl 1645 (1744)
+...+.++.| +++.|+=.+.+-+.-.+|.---+||-+||+++.
T Consensus 899 l~~~~~~llE-~~wsG~si~~WWrnQr~w~I~~tSa~lfavl~~ 941 (1079)
T PLN02638 899 LSIFATGILE-MRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQG 941 (1079)
T ss_pred HHHHHHHHHH-HHhccccHHHHhhhhhheehhhhHHHHHHHHHH
Confidence 3334446666 777787766655554567777788888888875
Done!