Query 000277
Match_columns 1733
No_of_seqs 725 out of 2108
Neff 7.6
Searched_HMMs 29240
Date Tue Mar 26 16:48:17 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000277.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_56-60//hhsearch_pdb/000277hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1i84_S Smooth muscle myosin he 1.0 1 1 108.4 11.6 32 122-162 151-183 (1184)
2 1i84_S Smooth muscle myosin he 1.0 1 1 108.3 11.7 18 76-93 166-183 (1184)
3 1c1g_A Tropomyosin; contractIl 1.0 1 1 75.9 46.7 282 867-1149 1-282 (284)
4 3vkg_A Dynein heavy chain, cyt 1.0 1 1 42.3 31.7 82 1072-1153 2024-2105(3245)
5 3vkg_A Dynein heavy chain, cyt 1.0 1 1 37.7 31.6 20 649-668 1786-1805(3245)
6 3na7_A HP0958; flagellar bioge 1.0 1 1 35.5 26.4 186 1011-1203 4-191 (256)
7 2v71_A Nuclear distribution pr 1.0 1 1 33.4 24.7 53 944-996 90-142 (189)
8 3l51_B Structural maintenance 1.0 1 1 33.2 -1.4 90 605-695 17-128 (166)
9 3o0z_A RHO-associated protein 1.0 1 1 29.1 22.5 148 903-1051 2-153 (168)
10 2dfs_A Myosin-5A; myosin-V, in 1.0 1 1 28.7 20.5 165 879-1049 914-1078(1080)
No 1
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=1.00 E-value=1 Score=108.42 Aligned_cols=32 Identities=16% Similarity=0.183 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC-CC
Q ss_conf 999999999999999860125643224554435667555-44
Q 000277 122 ENFARELANLRHQLKVLTNKDGELAEGFSEKEFGESDGK-RQ 162 (1733)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 162 (1733)
-+|+--..+.+.|+.. +++..+ =+.|+-|. |+
T Consensus 151 Hi~aia~~ay~~m~~~--~~~Q~i-------~isGeSGaGKT 183 (1184)
T 1i84_S 151 HIYAIADTAYRSMLQD--REDQSI-------LCTGESGAGKT 183 (1184)
T ss_dssp CHHHHHHHHHHHHHHH--TCCEEE-------ECCCSTTSSTT
T ss_pred CHHHHHHHHHHHHHHC--CCCCEE-------EEECCCCCCCC
T ss_conf 3756678999987735--899679-------97268888741
No 2
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=1.00 E-value=1 Score=108.29 Aligned_cols=18 Identities=22% Similarity=0.514 Sum_probs=8.9
Q ss_pred HHCCCCCCCCCCCCCCCC
Q ss_conf 210135554458888865
Q 000277 76 ENQNQNHLVETDVGSGSN 93 (1733)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~ 93 (1733)
...+|+-++.|-+|.|-.
T Consensus 166 ~~~~Q~i~isGeSGaGKT 183 (1184)
T 1i84_S 166 DREDQSILCTGESGAGKT 183 (1184)
T ss_dssp HTCCEEEECCCSTTSSTT
T ss_pred CCCCCEEEEECCCCCCCC
T ss_conf 589967997268888741
No 3
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=1.00 E-value=1 Score=75.86 Aligned_cols=282 Identities=16% Similarity=0.182 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98799999999999999999999999999999999999999999999959999999999999999999999999998986
Q 000277 867 LGNVKQEASALASELAETQSTMKSLEDALSVAEDKITQLADEKRQVEVGKKNVEEELEKAIEEAHIQTSKFAEACASRKS 946 (1733)
Q Consensus 867 i~~l~~~l~el~~el~kl~~e~~~le~eLeele~~is~L~ke~~~le~q~~el~~eLe~~~~el~~l~~~leE~~~~~~~ 946 (1733)
++.++..+..+...+..+...+..+...+..+...+..+...+..+...+..+...+..+...+......+......+..
T Consensus 1 ~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (284)
T 1c1g_A 1 MDAIKKKMQMLKLDKENALDRADEAEADKKAAEDRSKQLEDELVSLQKKLKATEDELDKYSEALKDAQEKLELAEKKATD 80 (284)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 93789999998876888999999999999999988988899999999999999999999999999999999999998987
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999988999999999999999999999999999999999789999999999999999999999998898799999
Q 000277 947 LEDEMSVAKNNMSVLICEKEEAQASGAAAVVELEQVREEFASQTSKLTEAYKTIKSLEDSLAQVEANVAMLTEQNKEEAQ 1026 (1733)
Q Consensus 947 L~~~l~~le~el~~L~eqlee~q~~~~~le~eL~kl~~el~~l~~klee~~~~ieeLee~l~~le~~l~~l~ee~~ee~~ 1026 (1733)
+...+..+...+..+...+.........+...+..+...+..+...+......+..+...+..+...+..+... +..+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~ 159 (284)
T 1c1g_A 81 AEADVASLNRRIQLFEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHI-AEDAD 159 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_conf 79889999999998898899889889999999999998888899999988877751066799999999999998-88899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 97999999999999999999988999999999999999999999999999999999747889999999999997999999
Q 000277 1027 ASGAAAVLELEQVREEFVSQTSKLTEAYTTIKSLEDALSQVEANVAVLTEQNNVLQVGKTTLENELQMLKDEAGSQAVKL 1106 (1733)
Q Consensus 1027 ~~~~~lE~el~~lq~Ele~l~~~l~~~~~~i~~Le~el~~~~~~l~~le~e~~~~e~~i~elk~el~~l~~El~~~~~el 1106 (1733)
..+..+...+..+...+......+......+..+...+..+...+..+...+..+...+..+...+..+...+......+
T Consensus 160 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 239 (284)
T 1c1g_A 160 RKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRA 239 (284)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88999998899888889989998987887999999999999999999997587788899999999999998889899889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9899969999999999998999999999999999999999999
Q 000277 1107 ADAHTTIKSMEDALLKAKNDISVLEGEKRISDQEVSALNSKLN 1149 (1733)
Q Consensus 1107 ~~~~~el~~L~~~Lee~~~~le~Le~e~k~l~~Ei~~L~~kl~ 1149 (1733)
......+..+...+..+...+..+......+...+..+...+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 282 (284)
T 1c1g_A 240 EFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMT 282 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999889999999999999999999889999999999999743
No 4
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=1.00 E-value=1 Score=42.34 Aligned_cols=82 Identities=13% Similarity=0.176 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999747889999999999997999999989996999999999999899999999999999999999999999
Q 000277 1072 AVLTEQNNVLQVGKTTLENELQMLKDEAGSQAVKLADAHTTIKSMEDALLKAKNDISVLEGEKRISDQEVSALNSKLNAC 1151 (1733)
Q Consensus 1072 ~~le~e~~~~e~~i~elk~el~~l~~El~~~~~el~~~~~el~~L~~~Lee~~~~le~Le~e~k~l~~Ei~~L~~kl~~l 1151 (1733)
.....++...+..+.++..++..++.+.+.+..+...+..++......+..+..-+..|..++.+....+..+..++..+
T Consensus 2024 ~~~~~~L~~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~~e~~~~~~kl~rA~~Li~gL~~Ek~RW~~~~~~l~~~~~~L 2103 (3245)
T 3vkg_A 2024 NELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIALLDNLNSERGRWEQQSENFNTQMSTV 2103 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
T ss_conf 99999999999999999999999999999999999999999999999999999999862113132999999999999725
Q ss_pred HH
Q ss_conf 99
Q 000277 1152 RD 1153 (1733)
Q Consensus 1152 ~~ 1153 (1733)
..
T Consensus 2104 ~G 2105 (3245)
T 3vkg_A 2104 VG 2105 (3245)
T ss_dssp HH
T ss_pred CH
T ss_conf 28
No 5
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=1.00 E-value=1 Score=37.66 Aligned_cols=20 Identities=10% Similarity=-0.074 Sum_probs=7.6
Q ss_pred CCCCCCCCCHHHHHHHHHHH
Q ss_conf 25688745348889998688
Q 000277 649 ASSDTSGADSEMLQTMQSLL 668 (1733)
Q Consensus 649 ~l~k~~~~~~e~~~~l~d~l 668 (1733)
|....-......|+.|..++
T Consensus 1786 Pvg~~fR~R~r~fPaLvncc 1805 (3245)
T 3vkg_A 1786 PASPDFHNRSATSPALFNRC 1805 (3245)
T ss_dssp TTSTTTTC----CTHHHHHS
T ss_pred CCCHHHHHHHHHCHHHHHCC
T ss_conf 99779999999791876271
No 6
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=1.00 E-value=1 Score=35.53 Aligned_cols=186 Identities=11% Similarity=0.100 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999988987999999799999999999999999998899999999999999999999999999999999974788999
Q 000277 1011 EANVAMLTEQNKEEAQASGAAAVLELEQVREEFVSQTSKLTEAYTTIKSLEDALSQVEANVAVLTEQNNVLQVGKTTLEN 1090 (1733)
Q Consensus 1011 e~~l~~l~ee~~ee~~~~~~~lE~el~~lq~Ele~l~~~l~~~~~~i~~Le~el~~~~~~l~~le~e~~~~e~~i~elk~ 1090 (1733)
...+..|.. +..+-..+..+...+..+..++.++...+..+...+..+...+..+...+..+...+..+...+...+.
T Consensus 4 ~~~L~~L~~--LQ~lD~~i~~l~~~~~~lp~el~~le~~~~~l~~~~~~~~~~l~d~~~~~~~~e~~i~~~~~ri~~~~~ 81 (256)
T 3na7_A 4 NTHLKQLIE--ISHLDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQK 81 (256)
T ss_dssp HHHHHHHHH--HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 899999999--999999999999999875899999999999999999999999999999999999789999999999999
Q ss_pred HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999--99799999998999699999999999989999999999999999999999999999996148369748999
Q 000277 1091 ELQMLKD--EAGSQAVKLADAHTTIKSMEDALLKAKNDISVLEGEKRISDQEVSALNSKLNACRDELAGTIGSLESRSVE 1168 (1733)
Q Consensus 1091 el~~l~~--El~~~~~el~~~~~el~~L~~~Lee~~~~le~Le~e~k~l~~Ei~~L~~kl~~l~~Ele~~~~~Le~~~~e 1168 (1733)
.+..... ++..+..++..+...+..+.+.+.++...++.+......+...+..+...+.....++......+......
T Consensus 82 ~l~~v~~~kE~~aL~kEie~~~~~i~~lE~eile~~e~ie~~~~~l~~~~~~l~~~~~~l~~~~~~~~~~~~e~~~e~~~ 161 (256)
T 3na7_A 82 KMSEIKSERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALELESLVENEVKNIKETQQI 161 (256)
T ss_dssp HHHHCSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98725899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99899999999851657889999999999988668
Q 000277 1169 LIGHLNDLQMHMKDERLLSAVKSCFERKIEGLQNM 1203 (1733)
Q Consensus 1169 l~~~leele~~lk~~~~l~~ik~e~er~l~~lk~~ 1203 (1733)
+......+...+... +-..|++-.....+.
T Consensus 162 l~~~r~~l~~~i~~~-----lL~~Yerir~~~~g~ 191 (256)
T 3na7_A 162 IFKKKEDLVEKTEPK-----IYSFYERIRRWAKNT 191 (256)
T ss_dssp HHHHHHHHHHTSCHH-----HHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHCCCHH-----HHHHHHHHHHHCCCC
T ss_conf 999999988569999-----999999999737996
No 7
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=1.00 E-value=1 Score=33.39 Aligned_cols=53 Identities=15% Similarity=0.084 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98699999999988999999999999999999999999999999999789999
Q 000277 944 RKSLEDEMSVAKNNMSVLICEKEEAQASGAAAVVELEQVREEFASQTSKLTEA 996 (1733)
Q Consensus 944 ~~~L~~~l~~le~el~~L~eqlee~q~~~~~le~eL~kl~~el~~l~~klee~ 996 (1733)
+..+...+..++.....+...+.++...-..+++........+.++..++..+
T Consensus 90 ~~~Lq~el~~l~~~~~~l~~~ireLEq~NDdlEr~~R~~~~SleD~e~kln~a 142 (189)
T 2v71_A 90 VSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIMSLEDFEQRLNQA 142 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999971288899989996599999898899
No 8
>3l51_B Structural maintenance of chromosomes protein 4; structural maintenance of chromosomes (SMC), hinge domain, C cycle, cell division, cytoplasm; 1.51A {Mus musculus} SCOP: d.215.1.0
Probab=1.00 E-value=1 Score=33.25 Aligned_cols=90 Identities=16% Similarity=0.160 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHCCCCCCHHHH--------HCCCCCCHHHHHHHHHHHHHH----CC--CCCCCC--------CCCHHHHH
Q ss_conf 679999998618986300111--------103688258899999999861----02--256887--------45348889
Q 000277 605 DHMVRVLLKESGTSMEDQDVA--------SQTSSDPTAIISKCIGKIREQ----TC--ASSDTS--------GADSEMLQ 662 (1733)
Q Consensus 605 ~~l~~~i~el~~~~i~~y~~A--------~~~~vet~~~a~~~i~~Lk~~----~~--~l~k~~--------~~~~e~~~ 662 (1733)
..+.|.|++++.++ ++|.+| +.++|+++.+|..|+++||++ .+ |+++-. ...+....
T Consensus 17 ~Gv~G~v~dLi~v~-~~y~~Aie~alg~l~~iVVd~~~~A~~~i~~Lk~~~~GRatflpL~~i~~~~~~~~~~~~~~~~~ 95 (166)
T 3l51_B 17 PGIYGRLGDLGAID-EKYDIAISSCCHALDYIVVDSIDTAQECVNFLKKHNIGIATFIGLDKMTVWAKKMSKIQTPENTP 95 (166)
T ss_dssp TTEEEEGGGSCBCC-GGGHHHHHHHCGGGGSEEESCHHHHHHHHHHHHHTTCCCCCEEEGGGTGGGTTSCCCCCCGGGCC
T ss_pred CCCEEEHHHHEEEC-HHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHH
T ss_conf 97168877803007-87999999997128429988799999999999872997079998865554556633022665465
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 998688863988899999879989999999999
Q 000277 663 TMQSLLYVSYQELILCQQILEEDALVRLQLNDL 695 (1733)
Q Consensus 663 ~l~d~l~~l~~E~~~l~~~le~~~~l~~~~~~l 695 (1733)
.+.|.+..-+.++..++..++.++.+..+++.+
T Consensus 96 ~a~dlv~~~d~~~~~a~~~llg~tlVv~dl~~A 128 (166)
T 3l51_B 96 RLFDLVKVKNEEIRQAFYFALRDTLVANNLDQA 128 (166)
T ss_dssp BHHHHCBCSCHHHHHHHHHHHTTCEEESSHHHH
T ss_pred HHHHEEECCCHHHHHHHHHHCCCEEEECCHHHH
T ss_conf 685204078688999999982998998999999
No 9
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=1.00 E-value=1 Score=29.08 Aligned_cols=148 Identities=15% Similarity=0.138 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999959999999999999999999999999998986999999999889999999999999999999999999
Q 000277 903 TQLADEKRQVEVGKKNVEEELEKAIEEAHIQTSKFAEACASRKSLEDEMSVAKNNMSVLICEKEEAQASGAAAVVELEQV 982 (1733)
Q Consensus 903 s~L~ke~~~le~q~~el~~eLe~~~~el~~l~~~leE~~~~~~~L~~~l~~le~el~~L~eqlee~q~~~~~le~eL~kl 982 (1733)
+.....+..++.++.++...+..-......++....++......+...+..+...+..+......++.....++..+..-
T Consensus 2 ~~~neKi~~LekQL~E~n~kLk~EsE~~~rlkK~~tEl~k~~~~~E~~~rELq~~~~~L~~~k~~Leke~~~LQa~L~qE 81 (168)
T 3o0z_A 2 SLANEKLSQLQKQLEEANDLLRTESDTAVRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQTDKDYYQLQAILEAE 81 (168)
T ss_dssp --------CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 63248889999999999999998678999999889999988998999978999999999988999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHH
Q ss_conf 9999999978999999999999999999999999889879999997999999999999----99999998899
Q 000277 983 REEFASQTSKLTEAYKTIKSLEDSLAQVEANVAMLTEQNKEEAQASGAAAVLELEQVR----EEFVSQTSKLT 1051 (1733)
Q Consensus 983 ~~el~~l~~klee~~~~ieeLee~l~~le~~l~~l~ee~~ee~~~~~~~lE~el~~lq----~Ele~l~~~l~ 1051 (1733)
+........-+.++..++..|...+..+..++..+..+ ...++.++..++++...+. =++..+...+.
T Consensus 82 r~~r~q~se~~~elq~ri~~L~~El~~~k~~~~k~~~e-~r~L~Ekl~~lEKe~a~~eid~~~eLKalQ~~~e 153 (168)
T 3o0z_A 82 RRDRGHDSEMIGDLQARITSLQEEVKHLKHNLEKVEGE-RKEAQDMLNHSEKEKNNLEIDLNYKLKSLQQRLE 153 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98887777899999999999999999999989999999-9999999899998997404788777999898999
No 10
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=1.00 E-value=1 Score=28.70 Aligned_cols=165 Identities=11% Similarity=0.101 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999959999999999999999999999999998986999999999889
Q 000277 879 SELAETQSTMKSLEDALSVAEDKITQLADEKRQVEVGKKNVEEELEKAIEEAHIQTSKFAEACASRKSLEDEMSVAKNNM 958 (1733)
Q Consensus 879 ~el~kl~~e~~~le~eLeele~~is~L~ke~~~le~q~~el~~eLe~~~~el~~l~~~leE~~~~~~~L~~~l~~le~el 958 (1733)
..+..+......++..+.++...+....+....+...+..+...+..-...+......++........+...+..++.++
T Consensus 914 r~~~~l~~~~~~LE~kl~eLq~rL~~~e~~n~~L~~~~~~~~~~~~~e~~~L~~~l~~le~~~~e~~~~~~~v~~L~~e~ 993 (1080)
T 2dfs_A 914 RSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEI 993 (1080)
T ss_dssp -------------------------------------CHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 87677899988899999999999999999999999999875678999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999789999999999999999999999998898799999979999999999
Q 000277 959 SVLICEKEEAQASGAAAVVELEQVREEFASQTSKLTEAYKTIKSLEDSLAQVEANVAMLTEQNKEEAQASGAAAVLELEQ 1038 (1733)
Q Consensus 959 ~~L~eqlee~q~~~~~le~eL~kl~~el~~l~~klee~~~~ieeLee~l~~le~~l~~l~ee~~ee~~~~~~~lE~el~~ 1038 (1733)
..++..+......+..++.....+..++. .++..+......|+..+..++..+....+. .. .......+.+...
T Consensus 994 ~~l~~~~~~~~ke~~~lee~~~~~~~~L~---~kv~~L~~e~~~L~qq~~~l~~~~~~~~~~-~~--~~~~~~~~~~~~~ 1067 (1080)
T 2dfs_A 994 AKLRKELHQTQTEKKTIEEWADKYKHETE---QLVSELKEQNTLLKTEKEELNRRIHDQAKE-IT--ETMEKKLVEETKQ 1067 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH--HHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999---999999999999999999999999998887-77--7888878999999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999988
Q 000277 1039 VREEFVSQTSK 1049 (1733)
Q Consensus 1039 lq~Ele~l~~~ 1049 (1733)
++.++++....
T Consensus 1068 ~~~~~~~~~~~ 1078 (1080)
T 2dfs_A 1068 LELDLNDERLR 1078 (1080)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
T ss_conf 99999999984
Done!