Query 000283
Match_columns 1724
No_of_seqs 325 out of 1182
Neff 3.8
Searched_HMMs 13730
Date Tue Mar 26 17:27:22 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000283.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_61-64//hhsearch_scop/000283hhsearch_scop
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1eqfa1 a.29.2.1 (A:1359-1497) 99.6 2.3E-14 1.7E-18 114.2 11.6 103 599-712 27-129 (139)
2 d3d7ca1 a.29.2.1 (A:731-832) G 99.5 2.7E-14 2E-18 113.7 10.3 101 597-708 1-101 (102)
3 d1wuma1 a.29.2.1 (A:715-832) P 99.5 5E-14 3.6E-18 111.9 11.2 105 595-710 10-114 (118)
4 d3dwya1 a.29.2.1 (A:1084-1197) 99.5 1.8E-14 1.3E-18 114.9 8.8 107 596-711 4-111 (114)
5 d1e6ia_ a.29.2.1 (A:) GCN5 {Ba 99.5 3.8E-14 2.7E-18 112.7 9.0 99 600-709 5-103 (111)
6 d1eqfa2 a.29.2.1 (A:1498-1625) 99.4 3.7E-13 2.7E-17 105.9 9.5 99 602-711 9-112 (128)
7 d1fp0a1 g.50.1.2 (A:19-88) Nuc 98.9 1.6E-09 1.2E-13 80.6 6.1 50 751-803 7-56 (70)
8 d1f62a_ g.50.1.2 (A:) Williams 98.8 2E-09 1.5E-13 79.9 3.6 49 753-801 2-50 (51)
9 d1mm2a_ g.50.1.2 (A:) Mi2-beta 98.7 1.5E-08 1.1E-12 74.0 5.4 53 749-804 7-59 (61)
10 d1weva_ g.50.1.2 (A:) PHD fing 98.4 5.4E-08 3.9E-12 70.0 2.5 52 752-803 17-74 (88)
11 d1wesa_ g.50.1.2 (A:) PHD Inhi 98.2 7.9E-07 5.8E-11 62.0 5.3 59 743-805 8-69 (71)
12 d1weea_ g.50.1.2 (A:) PHD fing 97.9 1.6E-06 1.1E-10 59.9 2.4 50 753-803 18-68 (72)
13 d1we9a_ g.50.1.2 (A:) PHD fing 97.7 7E-06 5.1E-10 55.4 2.9 54 751-804 6-61 (64)
14 d2pnxa1 g.50.1.2 (A:195-245) I 97.5 1.1E-05 7.7E-10 54.2 1.4 45 752-800 3-50 (51)
15 d1wepa_ g.50.1.2 (A:) PHD fing 97.3 2.1E-05 1.6E-09 52.0 1.0 51 753-804 14-66 (79)
16 d1wewa_ g.50.1.2 (A:) Sumoylat 97.3 6.3E-05 4.6E-09 48.8 2.9 56 748-804 13-75 (78)
17 d1wema_ g.50.1.2 (A:) Death as 97.2 1E-05 7.4E-10 54.3 -2.3 53 750-803 15-72 (76)
18 d1wila_ g.50.1.3 (A:) Hypothet 54.2 4.2 0.0003 15.4 3.3 53 748-801 12-76 (89)
19 d1v87a_ g.44.1.1 (A:) Deltex p 51.4 2.5 0.00018 16.9 1.2 55 751-805 25-95 (114)
20 d1vyxa_ g.44.1.3 (A:) IE1B pro 38.9 2.1 0.00015 17.4 -0.8 51 750-802 5-57 (60)
21 d1njqa_ g.37.1.3 (A:) SUPERMAN 30.9 5.7 0.00041 14.4 0.3 26 1325-1350 1-27 (37)
22 d1iyma_ g.44.1.1 (A:) EL5 RING 28.9 10 0.00074 12.7 2.9 48 750-801 4-52 (55)
No 1
>d1eqfa1 a.29.2.1 (A:1359-1497) TAFII250 double bromodomain module {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=2.3e-14 Score=114.19 Aligned_cols=103 Identities=14% Similarity=0.184 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf 89999999999991441465521013568787777787877766433477873678855103544898256676599998
Q 000283 599 IMKQCRKVLRCAAAADEERVFCNLLGRTLLNTSDNDDEGLLGFPAMVSRPLDFRTIDLRLAFGAYGGSHEAFLEDVREVW 678 (1724)
Q Consensus 599 IlKrCr~ILk~Ll~s~~s~~F~~pVd~~lLdleD~i~qGLlGYp~IIkRPMDLGTIDlRLaaG~Y~gs~E~FAeDVRLVW 678 (1724)
+...|..|++.+..++.+++|..||+. ..+++|+.+|++||||.+|..|+..+.|. +.+.|.+|++++|
T Consensus 27 l~~~l~~il~~l~~~~~s~pF~~Pvd~----------~~~pdY~~iI~~PmdL~tI~~kl~~~~Y~-s~~~f~~D~~li~ 95 (139)
T d1eqfa1 27 LSSILESIINDMRDLPNTYPFHTPVNA----------KVVKDYYKIITRPMDLQTLRENVRKRLYP-SREEFREHLELIV 95 (139)
T ss_dssp HHHHHHHHHHHHHTSTTCGGGTSCCCT----------TTSTTHHHHCSSCCCHHHHHHHHHTTCCS-SHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCHHHHCCCCH----------HHCCCHHHHCCCHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHH
T ss_conf 999999999999829976555179993----------44667898807735499999999748908-9999999999999
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7442214798648999898312459999986443
Q 000283 679 HHICTAYSDQSDLLQLAGKLCQNFEVLYKKEVLT 712 (1724)
Q Consensus 679 sNi~tyN~dgSEVv~LAesLSqiFEslYkKqVL~ 712 (1724)
.||..||+.++.++.+|..|...|+..+.+....
T Consensus 96 ~Na~~yN~~~s~i~~~A~~L~~~~~~~~~~~~~~ 129 (139)
T d1eqfa1 96 KNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDK 129 (139)
T ss_dssp HHHHHHTCTTSHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999987999999999999999999999999999
No 2
>d3d7ca1 a.29.2.1 (A:731-832) GCN5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=2.7e-14 Score=113.71 Aligned_cols=101 Identities=17% Similarity=0.228 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHH
Q ss_conf 58899999999999914414655210135687877777878777664334778736788551035448982566765999
Q 000283 597 DVIMKQCRKVLRCAAAADEERVFCNLLGRTLLNTSDNDDEGLLGFPAMVSRPLDFRTIDLRLAFGAYGGSHEAFLEDVRE 676 (1724)
Q Consensus 597 d~IlKrCr~ILk~Ll~s~~s~~F~~pVd~~lLdleD~i~qGLlGYp~IIkRPMDLGTIDlRLaaG~Y~gs~E~FAeDVRL 676 (1724)
|.+...|+.||..+..++.+++|..||+. ...|+|..+|++||||+||..|+..+.|. +.+.|.+|+++
T Consensus 1 d~L~~~l~~il~~l~~~~~s~~F~~pv~~----------~~~pdY~~~I~~PmdL~tI~~kl~~~~Y~-s~~~f~~D~~l 69 (102)
T d3d7ca1 1 DQLYTTLKNLLAQIKSHPSAWPFMEPVKK----------SEAPDYYEVIRFPIDLKTMTERLRSRYYV-TRKLFVADLQR 69 (102)
T ss_dssp HHHHHHHHHHHHHHHHSGGGGGGSSCCCT----------TTSTTHHHHCSSCCCHHHHHHHHHTTCCC-SHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCCCH----------HHCCCHHHHCCCCCCHHHHHHHHCCCCCC-CHHHHHHHHHH
T ss_conf 95999999999999809997722788996----------66767898808946899999876067637-79999999999
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 98744221479864899989831245999998
Q 000283 677 VWHHICTAYSDQSDLLQLAGKLCQNFEVLYKK 708 (1724)
Q Consensus 677 VWsNi~tyN~dgSEVv~LAesLSqiFEslYkK 708 (1724)
+|.||..||+.++.++.+|..|.+.|+....+
T Consensus 70 i~~Na~~yN~~~s~~~~~A~~l~~~f~~~~ke 101 (102)
T d3d7ca1 70 VIANCREYNPPDSEYCRCASALEKFFYFKLKE 101 (102)
T ss_dssp HHHHHHHHSCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 99999998799999999999999999999736
No 3
>d1wuma1 a.29.2.1 (A:715-832) P300/CAF histone acetyltransferase bromodomain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=5e-14 Score=111.88 Aligned_cols=105 Identities=20% Similarity=0.283 Sum_probs=95.5
Q ss_pred CCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHH
Q ss_conf 71588999999999999144146552101356878777778787776643347787367885510354489825667659
Q 000283 595 VPDVIMKQCRKVLRCAAAADEERVFCNLLGRTLLNTSDNDDEGLLGFPAMVSRPLDFRTIDLRLAFGAYGGSHEAFLEDV 674 (1724)
Q Consensus 595 ~sd~IlKrCr~ILk~Ll~s~~s~~F~~pVd~~lLdleD~i~qGLlGYp~IIkRPMDLGTIDlRLaaG~Y~gs~E~FAeDV 674 (1724)
.++.+...|+.|++.+..++.+++|..||+. ...|+|+.+|++||||++|..|+..+.|. +.+.|..|+
T Consensus 10 ~~~~l~~~l~~il~~l~~~~~a~~F~~pv~~----------~~~pdY~~iI~~PmdL~~I~~kl~~~~Y~-s~~ef~~Dv 78 (118)
T d1wuma1 10 DPDQLYSTLKSILQQVKSHQSAWPFMEPVKR----------TEAPGYYEVIRFPMDLKTMSERLKNRYYV-SKKLFMADL 78 (118)
T ss_dssp SHHHHHHHHHHHHHHHHHSSSCHHHHSCCCS----------SSSSSCTTTCSSCCCHHHHHHHHTTTCCC-SSHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH----------HHCCCHHHHCCCHHHHHHHHHHHCCCCCC-CHHHHHHHH
T ss_conf 9899999999999999958996815688996----------45768898838742099999976046657-668999999
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999874422147986489998983124599999864
Q 000283 675 REVWHHICTAYSDQSDLLQLAGKLCQNFEVLYKKEV 710 (1724)
Q Consensus 675 RLVWsNi~tyN~dgSEVv~LAesLSqiFEslYkKqV 710 (1724)
+++|.||..||+.++.++.+|..|...|+..+.+.-
T Consensus 79 ~li~~Na~~yn~~~s~~~~~A~~l~~~f~~~~~e~~ 114 (118)
T d1wuma1 79 QRVFTNCKEYNPPESEYYKCANILEKFFFSKIKEAG 114 (118)
T ss_dssp HHHHHHHHHHSCTTSSHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999999879999999999999999999999865
No 4
>d3dwya1 a.29.2.1 (A:1084-1197) CREB-binding protein, CBP {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=1.8e-14 Score=114.94 Aligned_cols=107 Identities=20% Similarity=0.294 Sum_probs=95.4
Q ss_pred CHHHHHHHHHHHHHHHHC-CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHH
Q ss_conf 158899999999999914-4146552101356878777778787776643347787367885510354489825667659
Q 000283 596 PDVIMKQCRKVLRCAAAA-DEERVFCNLLGRTLLNTSDNDDEGLLGFPAMVSRPLDFRTIDLRLAFGAYGGSHEAFLEDV 674 (1724)
Q Consensus 596 sd~IlKrCr~ILk~Ll~s-~~s~~F~~pVd~~lLdleD~i~qGLlGYp~IIkRPMDLGTIDlRLaaG~Y~gs~E~FAeDV 674 (1724)
++.+-+.|..+|..+..+ +.+++|.+||++.. .++++|+.+|++||||.+|..|+..+.|. +.+.|..|+
T Consensus 4 p~el~~~l~~~l~~l~~~~p~a~pF~~pvd~~~--------~~~pdY~~iI~~PmdL~tI~~kl~~~~Y~-s~~ef~~Dv 74 (114)
T d3dwya1 4 PEELRQALMPTLEALYRQDPESLPFRQPVDPQL--------LGIPDYFDIVKNPMDLSTIKRKLDTGQYQ-EPWQYVDDV 74 (114)
T ss_dssp HHHHHHHHHHHHHHHHTCTTTTGGGSSCCCHHH--------HTCTTHHHHCSSCCCHHHHHHHHHTTCCS-SHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH--------CCCCCHHHHCCCCCCHHHHHHHHHCCCCC-CHHHHHHHH
T ss_conf 899999999999999853967776679998321--------35997788837877799999998847566-299999999
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9998744221479864899989831245999998644
Q 000283 675 REVWHHICTAYSDQSDLLQLAGKLCQNFEVLYKKEVL 711 (1724)
Q Consensus 675 RLVWsNi~tyN~dgSEVv~LAesLSqiFEslYkKqVL 711 (1724)
+++|+||..||+.++.++.+|..|.+.|+..+.+.+.
T Consensus 75 ~li~~Na~~yN~~~s~~~~~A~~L~~~f~~~~~~i~~ 111 (114)
T d3dwya1 75 WLMFNNAWLYNRKTSRVYKFCSKLAEVFEQEIDPVMQ 111 (114)
T ss_dssp HHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999998799999999999999999999999998
No 5
>d1e6ia_ a.29.2.1 (A:) GCN5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.50 E-value=3.8e-14 Score=112.72 Aligned_cols=99 Identities=17% Similarity=0.290 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 99999999999914414655210135687877777878777664334778736788551035448982566765999987
Q 000283 600 MKQCRKVLRCAAAADEERVFCNLLGRTLLNTSDNDDEGLLGFPAMVSRPLDFRTIDLRLAFGAYGGSHEAFLEDVREVWH 679 (1724)
Q Consensus 600 lKrCr~ILk~Ll~s~~s~~F~~pVd~~lLdleD~i~qGLlGYp~IIkRPMDLGTIDlRLaaG~Y~gs~E~FAeDVRLVWs 679 (1724)
.+.|..||..+..++.+++|..||+. ..+++|..+|++||||++|..|+..+.|. +.+.|.+|++++|.
T Consensus 5 ~~~l~~il~~l~~~~~a~pF~~pvd~----------~~~pdY~~vI~~PmdL~tI~~kl~~~~Y~-s~~~f~~Dv~li~~ 73 (111)
T d1e6ia_ 5 DAAIQNILTELQNHAAAWPFLQPVNK----------EEVPDYYDFIKEPMDLSTMEIKLESNKYQ-KMEDFIYDARLVFN 73 (111)
T ss_dssp HHHHHHHHHHHHHSTTCGGGSSCCCT----------TTSTTHHHHCSSCCCHHHHHHHHHTTCCS-SHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCHHHCCCCCC----------HHCCCHHHHCCCCHHHHHHHHHHHCCCCC-HHHHHHHHHHHHHH
T ss_conf 99999999999869887131489990----------21708898858804198999998736124-29999999999999
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 442214798648999898312459999986
Q 000283 680 HICTAYSDQSDLLQLAGKLCQNFEVLYKKE 709 (1724)
Q Consensus 680 Ni~tyN~dgSEVv~LAesLSqiFEslYkKq 709 (1724)
||..||+.++.+..+|..|.+.|+..+.+.
T Consensus 74 Na~~yN~~~s~i~~~A~~l~~~f~~~~~~i 103 (111)
T d1e6ia_ 74 NCRMYNGENTSYYKYANRLEKFFNNKVKEI 103 (111)
T ss_dssp HHHHHSCTTSHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 999987999999999999999999999973
No 6
>d1eqfa2 a.29.2.1 (A:1498-1625) TAFII250 double bromodomain module {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=3.7e-13 Score=105.85 Aligned_cols=99 Identities=16% Similarity=0.193 Sum_probs=85.0
Q ss_pred HHHHHHHHH-----HHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHH
Q ss_conf 999999999-----914414655210135687877777878777664334778736788551035448982566765999
Q 000283 602 QCRKVLRCA-----AAADEERVFCNLLGRTLLNTSDNDDEGLLGFPAMVSRPLDFRTIDLRLAFGAYGGSHEAFLEDVRE 676 (1724)
Q Consensus 602 rCr~ILk~L-----l~s~~s~~F~~pVd~~lLdleD~i~qGLlGYp~IIkRPMDLGTIDlRLaaG~Y~gs~E~FAeDVRL 676 (1724)
.+..+|.++ ...+.+|+|..||+. ..+|+|+.+|++||||.||..|+..+.|. +...|.+|+++
T Consensus 9 ~~~~il~~l~~~~~~~~p~a~pF~~pVd~----------~~~PdY~~vIk~PmDL~tI~~kl~~~~Y~-s~~ef~~Dv~l 77 (128)
T d1eqfa2 9 AFSFILDNIVTQKMMAVPDSWPFHHPVNK----------KFVPDYYKVIVNPMDLETIRKNISKHKYQ-SRESFLDDVNL 77 (128)
T ss_dssp HHHHHHHHHHHHTTTTSTTCGGGTSCCCT----------TTSTTHHHHCSSCCCHHHHHHHHHTTCCS-SHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCHHCCCCCC----------CCCCCHHHHCCCCCCHHHHHHHHHHHCCC-CHHHHHHHHHH
T ss_conf 99999999999998719987701479990----------00768898848810399999999863246-38999999999
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98744221479864899989831245999998644
Q 000283 677 VWHHICTAYSDQSDLLQLAGKLCQNFEVLYKKEVL 711 (1724)
Q Consensus 677 VWsNi~tyN~dgSEVv~LAesLSqiFEslYkKqVL 711 (1724)
+|+||..||+.++.+..+|..|...|+..+.+...
T Consensus 78 i~~Na~~yN~~~s~i~~~A~~L~~~~~~~l~~~~~ 112 (128)
T d1eqfa2 78 ILANSVKYNGPESQYTKTAQEIVNVCYQTLTEYDE 112 (128)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998799999999999999999999999698
No 7
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.87 E-value=1.6e-09 Score=80.64 Aligned_cols=50 Identities=28% Similarity=0.806 Sum_probs=42.6
Q ss_pred CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 42142146788999818724799977554568888889999965853777886
Q 000283 751 EGVCKVCGIDKDDDNVLLCDTCDSGYHTYCLTPPLTRVPEGNWYCPPCLSGNC 803 (1724)
Q Consensus 751 d~~C~VCg~~~d~e~LLlCD~Cd~~YHl~CL~PPL~~IPeGdWyCp~Ci~~~~ 803 (1724)
+.+|.+|+ ++++||+||.|+++||++|+.||+..+|.++|+|+.|.....
T Consensus 7 c~~C~~C~---~~~~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~~ 56 (70)
T d1fp0a1 7 ATICRVCQ---KPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPD 56 (70)
T ss_dssp SSCCSSSC---SSSCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCCS
T ss_pred CCCCCCCC---CCCEEEECCCCCHHHCCCCCCCCCCCCCCCCEECCCCCCCCC
T ss_conf 79987779---969788899999156351489986848898989967948376
No 8
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.76 E-value=2e-09 Score=79.90 Aligned_cols=49 Identities=45% Similarity=1.225 Sum_probs=45.8
Q ss_pred CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 1421467889998187247999775545688888899999658537778
Q 000283 753 VCKVCGIDKDDDNVLLCDTCDSGYHTYCLTPPLTRVPEGNWYCPPCLSG 801 (1724)
Q Consensus 753 ~C~VCg~~~d~e~LLlCD~Cd~~YHl~CL~PPL~~IPeGdWyCp~Ci~~ 801 (1724)
.|.+|+..++++.||+||.|+..||++|++||+..+|.++|+|+.|...
T Consensus 2 ~C~vC~~~~~~~~~i~Cd~C~~~~H~~C~~p~~~~~p~~~W~C~~C~~~ 50 (51)
T d1f62a_ 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQPA 50 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSCC
T ss_pred CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC
T ss_conf 9957689799988788589997897998899878589979899289090
No 9
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.66 E-value=1.5e-08 Score=73.95 Aligned_cols=53 Identities=45% Similarity=1.102 Sum_probs=46.1
Q ss_pred CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66421421467889998187247999775545688888899999658537778867
Q 000283 749 WDEGVCKVCGIDKDDDNVLLCDTCDSGYHTYCLTPPLTRVPEGNWYCPPCLSGNCK 804 (1724)
Q Consensus 749 w~d~~C~VCg~~~d~e~LLlCD~Cd~~YHl~CL~PPL~~IPeGdWyCp~Ci~~~~~ 804 (1724)
.++++|.+|+ +++.||+||.|+++||+.|+.|++..+|.+.|+|+.|.....+
T Consensus 7 ~~~~~C~~C~---~~g~lv~Cd~C~~~~H~~C~~~~~~~~~~~~W~C~~C~~~~~k 59 (61)
T d1mm2a_ 7 HHMEFCRVCK---DGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALK 59 (61)
T ss_dssp SSCSSCTTTC---CCSSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTCCT
T ss_pred CCCCCCCCCC---CCCEEEEECCCCCCCCHHHCCCCCCCCCCCCEECCCCCCCCCC
T ss_conf 8868986789---9795888699996076114588857589976899788384567
No 10
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.39 E-value=5.4e-08 Score=70.03 Aligned_cols=52 Identities=29% Similarity=0.691 Sum_probs=43.2
Q ss_pred CCCCCCCCCC--CCCCEEEECCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCC
Q ss_conf 2142146788--9998187247999775545688888----89999965853777886
Q 000283 752 GVCKVCGIDK--DDDNVLLCDTCDSGYHTYCLTPPLT----RVPEGNWYCPPCLSGNC 803 (1724)
Q Consensus 752 ~~C~VCg~~~--d~e~LLlCD~Cd~~YHl~CL~PPL~----~IPeGdWyCp~Ci~~~~ 803 (1724)
..|.+|+... +.+.||.||.|..+||++|+.||+. .+|.++|||+.|.....
T Consensus 17 ~~C~iC~~~~~~~~~~~v~Cd~C~~~~H~~C~~p~~~~~~~~~~~~~W~C~~C~~~~~ 74 (88)
T d1weva_ 17 LACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMK 74 (88)
T ss_dssp CSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHC
T ss_pred CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHH
T ss_conf 9925789906789996888489997456112798555433455898389944573376
No 11
>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.22 E-value=7.9e-07 Score=61.96 Aligned_cols=59 Identities=29% Similarity=0.773 Sum_probs=41.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEE--CCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 799987664214214678899981872--4799-97755456888888999996585377788678
Q 000283 743 EIPKAPWDEGVCKVCGIDKDDDNVLLC--DTCD-SGYHTYCLTPPLTRVPEGNWYCPPCLSGNCKN 805 (1724)
Q Consensus 743 ~lP~~~w~d~~C~VCg~~~d~e~LLlC--D~Cd-~~YHl~CL~PPL~~IPeGdWyCp~Ci~~~~~~ 805 (1724)
.++..+.+...| +|++.. .+.+++| +.|. .+||+.|+. |..+|.++||||.|....+..
T Consensus 8 ~~~~d~~e~~~C-iC~~~~-~~~~i~c~~~~C~~~wfH~~Cvg--l~~~p~~~w~C~~C~~~~gp~ 69 (71)
T d1wesa_ 8 EFAIDPNEPTYC-LCNQVS-YGEMIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKCRGDSGPS 69 (71)
T ss_dssp CSCCCSSSCCCS-TTCCCC-CSSEECCSCTTCSCCCEETTTTT--CSSCCSSCCCCTTTSSCCSCS
T ss_pred CCCCCCCCCCEE-EECCCC-CCCEEEEECCCCCCCCCCCCCCC--CCCCCCCCEECCCCCCCCCCC
T ss_conf 877688998877-828977-89877887889999685485478--984799858996886634868
No 12
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=97.94 E-value=1.6e-06 Score=59.91 Aligned_cols=50 Identities=26% Similarity=0.592 Sum_probs=41.8
Q ss_pred CCCCCCCCC-CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 142146788-999818724799977554568888889999965853777886
Q 000283 753 VCKVCGIDK-DDDNVLLCDTCDSGYHTYCLTPPLTRVPEGNWYCPPCLSGNC 803 (1724)
Q Consensus 753 ~C~VCg~~~-d~e~LLlCD~Cd~~YHl~CL~PPL~~IPeGdWyCp~Ci~~~~ 803 (1724)
.| +|+... +.+.||+||.|+.+||+.|+.++...+|.++|+|+.|+....
T Consensus 18 ~C-~C~~~~~~~~~mv~Cd~C~~w~H~~C~g~~~~~~~~~~~~C~~C~~~~~ 68 (72)
T d1weea_ 18 DC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIELSG 68 (72)
T ss_dssp CC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHHCS
T ss_pred EE-ECCCCCCCCCEEEEECCCCCCCCHHHCCCCCCCCCCCCEECCCCCCCCC
T ss_conf 70-6899848998698959999839551269762458997699928858188
No 13
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=97.74 E-value=7e-06 Score=55.41 Aligned_cols=54 Identities=24% Similarity=0.626 Sum_probs=43.2
Q ss_pred CCCCCCCCCCCCC-CCEEEECCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCC
Q ss_conf 4214214678899-981872479997755456888888999-99658537778867
Q 000283 751 EGVCKVCGIDKDD-DNVLLCDTCDSGYHTYCLTPPLTRVPE-GNWYCPPCLSGNCK 804 (1724)
Q Consensus 751 d~~C~VCg~~~d~-e~LLlCD~Cd~~YHl~CL~PPL~~IPe-GdWyCp~Ci~~~~~ 804 (1724)
...|.+|++..+. +.||.||.|..+||..|+.++...++. .+|+|+.|....+.
T Consensus 6 ~~~C~~C~~~~~~~~~~I~Cd~C~~w~H~~C~~~~~~~~~~~~~w~C~~C~~~~~p 61 (64)
T d1we9a_ 6 SGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKSGP 61 (64)
T ss_dssp CCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTTTCS
T ss_pred CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCEEECCCCCCCCCC
T ss_conf 78184869977999878774899956980457858678888980899689380988
No 14
>d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4 {Homo sapiens [TaxId: 9606]}
Probab=97.53 E-value=1.1e-05 Score=54.15 Aligned_cols=45 Identities=31% Similarity=0.814 Sum_probs=36.8
Q ss_pred CCCCCCCCCCCCCCEEEECC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 21421467889998187247---99977554568888889999965853777
Q 000283 752 GVCKVCGIDKDDDNVLLCDT---CDSGYHTYCLTPPLTRVPEGNWYCPPCLS 800 (1724)
Q Consensus 752 ~~C~VCg~~~d~e~LLlCD~---Cd~~YHl~CL~PPL~~IPeGdWyCp~Ci~ 800 (1724)
..| +|++.. .+.|+.||. |..+||+.|++ |..+|.++||||.|..
T Consensus 3 ~yC-~C~~~~-~~~mi~Cd~~~C~~~WfH~~Cvg--l~~~p~~~w~C~~C~~ 50 (51)
T d2pnxa1 3 TYC-LCHQVS-YGEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQ 50 (51)
T ss_dssp EET-TTTEEC-CSEEEECSCTTCSSCEEEGGGGT--CSSCCSSCCCCHHHHC
T ss_pred CEE-ECCCCC-CCCEEEEECCCCCCCCEECCCCC--CCCCCCCCEECCCCCC
T ss_conf 378-817978-89898885679998779287648--8847998699937779
No 15
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.35 E-value=2.1e-05 Score=52.02 Aligned_cols=51 Identities=18% Similarity=0.488 Sum_probs=39.5
Q ss_pred CCCCCCCCCC-CCCEEEECCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCC
Q ss_conf 1421467889-9981872479997755456888888999-99658537778867
Q 000283 753 VCKVCGIDKD-DDNVLLCDTCDSGYHTYCLTPPLTRVPE-GNWYCPPCLSGNCK 804 (1724)
Q Consensus 753 ~C~VCg~~~d-~e~LLlCD~Cd~~YHl~CL~PPL~~IPe-GdWyCp~Ci~~~~~ 804 (1724)
.| +|+...+ .+.||.||.|+.+||..|+..+...++. +.|+|+.|....+.
T Consensus 14 ~C-iC~~~~~~~~~mI~Cd~C~~W~H~~C~g~~~~~~~~~~~~~C~~C~~~~gp 66 (79)
T d1wepa_ 14 YC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVFGP 66 (79)
T ss_dssp CS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTSCS
T ss_pred EE-ECCCCCCCCCCEEECCCCCCCEECCCCCCCHHCCCCCCEEECCCCCCCCCC
T ss_conf 84-898965999868889989973960341745102787877899567387687
No 16
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=97.30 E-value=6.3e-05 Score=48.80 Aligned_cols=56 Identities=27% Similarity=0.627 Sum_probs=39.3
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEC--CCCCCCCCCCCCC---CCCCCCC--CCCCCCCCCCCCCC
Q ss_conf 76642142146788999818724--7999775545688---8888999--99658537778867
Q 000283 748 PWDEGVCKVCGIDKDDDNVLLCD--TCDSGYHTYCLTP---PLTRVPE--GNWYCPPCLSGNCK 804 (1724)
Q Consensus 748 ~w~d~~C~VCg~~~d~e~LLlCD--~Cd~~YHl~CL~P---PL~~IPe--GdWyCp~Ci~~~~~ 804 (1724)
+.....| +|+...+.+.+++|+ .|..+||..|+.- |+...+. ..|+|+.|....+.
T Consensus 13 ~~~~~~C-~C~~~~~~~~~i~c~c~~C~~W~H~~Cvgi~~~~~~~~~~~~~~~~C~~C~~~~~p 75 (78)
T d1wewa_ 13 PEIKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTSGP 75 (78)
T ss_dssp CCCCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCCSC
T ss_pred CCCCCEE-ECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC
T ss_conf 8985483-89994178867888689898679800117663242245689998989788485887
No 17
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.16 E-value=1e-05 Score=54.27 Aligned_cols=53 Identities=19% Similarity=0.540 Sum_probs=40.3
Q ss_pred CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCC
Q ss_conf 642142146788999818724799977554568888-----889999965853777886
Q 000283 750 DEGVCKVCGIDKDDDNVLLCDTCDSGYHTYCLTPPL-----TRVPEGNWYCPPCLSGNC 803 (1724)
Q Consensus 750 ~d~~C~VCg~~~d~e~LLlCD~Cd~~YHl~CL~PPL-----~~IPeGdWyCp~Ci~~~~ 803 (1724)
+...| +|++..+++.||.||.|+.+||..|+..+- ...+..+|+|+.|....+
T Consensus 15 ~~~~C-iC~~~~~~~~mi~Cd~C~~w~H~~Cvg~~~~~~~~~~~~~~~w~C~~C~~~~~ 72 (76)
T d1wema_ 15 NALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILSG 72 (76)
T ss_dssp TCCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHSC
T ss_pred CCCEE-ECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCC
T ss_conf 95887-89992599818887999976995106887010111478998189979818487
No 18
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.18 E-value=4.2 Score=15.36 Aligned_cols=53 Identities=25% Similarity=0.618 Sum_probs=36.3
Q ss_pred CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC--------C--CCC--CCCCCCCCCCCCC
Q ss_conf 7664214214678899981872479997755456888--------8--889--9999658537778
Q 000283 748 PWDEGVCKVCGIDKDDDNVLLCDTCDSGYHTYCLTPP--------L--TRV--PEGNWYCPPCLSG 801 (1724)
Q Consensus 748 ~w~d~~C~VCg~~~d~e~LLlCD~Cd~~YHl~CL~PP--------L--~~I--PeGdWyCp~Ci~~ 801 (1724)
..+|..|.||..- ..+.++-|-.|.+.||..||.-. + ... -.--|.|..|-.-
T Consensus 12 v~~D~mC~vC~v~-t~~~l~pCRvCtRv~H~~CL~r~gyl~~e~a~e~~e~A~T~~GWSC~~C~nl 76 (89)
T d1wila_ 12 VVNDEMCDVCEVW-TAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNI 76 (89)
T ss_dssp CCCSCCCTTTCCC-CSSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCC
T ss_pred CCCCCCCCCCCCC-CCCCEECCEEECCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHCCH
T ss_conf 8867623656743-3454023213341124788988510244899999986047888310221225
No 19
>d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=51.38 E-value=2.5 Score=16.92 Aligned_cols=55 Identities=22% Similarity=0.412 Sum_probs=31.5
Q ss_pred CCCCCCCCCCC---------------CCCCEEEECCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCC
Q ss_conf 42142146788---------------9998187247999775545688888899-9996585377788678
Q 000283 751 EGVCKVCGIDK---------------DDDNVLLCDTCDSGYHTYCLTPPLTRVP-EGNWYCPPCLSGNCKN 805 (1724)
Q Consensus 751 d~~C~VCg~~~---------------d~e~LLlCD~Cd~~YHl~CL~PPL~~IP-eGdWyCp~Ci~~~~~~ 805 (1724)
++.|.||...- .....+..-.|...||..||..=|.... .+.--||.|+......
T Consensus 25 ~~~C~IC~e~l~~~~~~~~~~~~~~~~~~~~~~~~~CgH~FH~~Ci~~Wl~~~~~~~~~~CP~CR~~~~~~ 95 (114)
T d1v87a_ 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSC
T ss_pred CCCCCCHHHEECCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCC
T ss_conf 65345301000134443354333454554346879999905699999999966757897665501220667
No 20
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]}
Probab=38.88 E-value=2.1 Score=17.41 Aligned_cols=51 Identities=25% Similarity=0.359 Sum_probs=33.2
Q ss_pred CCCCCCCCCCCCCCCCEE--EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 642142146788999818--72479997755456888888999996585377788
Q 000283 750 DEGVCKVCGIDKDDDNVL--LCDTCDSGYHTYCLTPPLTRVPEGNWYCPPCLSGN 802 (1724)
Q Consensus 750 ~d~~C~VCg~~~d~e~LL--lCD~Cd~~YHl~CL~PPL~~IPeGdWyCp~Ci~~~ 802 (1724)
+...|.+|........+. -|.+|...||..||..=+.. .+.+.||.|....
T Consensus 5 d~~~C~IC~~~~~~~~~~~c~c~~c~h~~H~~Cl~~W~~~--~~~~~CP~Cr~~~ 57 (60)
T d1vyxa_ 5 DVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTI--SRNTACQICGVVY 57 (60)
T ss_dssp SCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHH--HTCSBCTTTCCBC
T ss_pred CCCCCCCCCCCCCCCEEEECCCCCCCCEECHHHHHHHHHH--CCCCCCCCCCCEE
T ss_conf 8999923886277751673145897788738999999710--7898891669712
No 21
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=30.94 E-value=5.7 Score=14.44 Aligned_cols=26 Identities=27% Similarity=0.556 Sum_probs=22.1
Q ss_pred CCCCC-CHHHHCCCCCCCCCCCCCCCC
Q ss_conf 78843-100000011120000124674
Q 000283 1325 LPTRF-HCRRCHLSFSARNELEEHNDA 1350 (1724)
Q Consensus 1325 ~p~r~-hc~~ch~t~~~~~e~e~h~~~ 1350 (1724)
||.|. -|..|.+.|.+.-.|-||+..
T Consensus 1 ~p~r~~~C~~C~k~F~s~qALGGH~~~ 27 (37)
T d1njqa_ 1 WPPRSYTCSFCKREFRSAQALGGHMNV 27 (37)
T ss_dssp CCSSSEECTTTCCEESSHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 998762889988833786545031765
No 22
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa) [TaxId: 4530]}
Probab=28.87 E-value=10 Score=12.69 Aligned_cols=48 Identities=25% Similarity=0.524 Sum_probs=33.9
Q ss_pred CCCCCCCCCCCCC-CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6421421467889-998187247999775545688888899999658537778
Q 000283 750 DEGVCKVCGIDKD-DDNVLLCDTCDSGYHTYCLTPPLTRVPEGNWYCPPCLSG 801 (1724)
Q Consensus 750 ~d~~C~VCg~~~d-~e~LLlCD~Cd~~YHl~CL~PPL~~IPeGdWyCp~Ci~~ 801 (1724)
++..|.+|...-. ++.++.+..|...||..|+..=+..- =.||.|+..
T Consensus 4 d~~~C~ICl~~~~~~~~~~~l~~C~H~Fh~~Ci~~Wl~~~----~~CP~CR~~ 52 (55)
T d1iyma_ 4 DGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSH----STCPLCRLT 52 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTC----CSCSSSCCC
T ss_pred CCCCCEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHC----CCCCCCCCE
T ss_conf 9999849790010798899908989810599999999849----938788978
Done!