Query 000284
Match_columns 1723
No_of_seqs 968 out of 6375
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 02:46:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000284.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/000284hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01257 rim_protein retinal- 100.0 1E-216 3E-221 2184.5 158.7 1540 21-1694 526-2258(2272)
2 KOG0059 Lipid exporter ABCA1 a 100.0 1.1E-86 2.3E-91 886.1 62.4 852 628-1690 2-880 (885)
3 KOG0055 Multidrug/pheromone ex 100.0 3.2E-78 6.9E-83 776.3 58.9 224 448-680 349-584 (1228)
4 TIGR00956 3a01205 Pleiotropic 100.0 7.3E-76 1.6E-80 811.9 75.8 832 464-1578 72-989 (1394)
5 COG1123 ATPase components of v 100.0 4.5E-77 9.7E-82 722.9 50.7 225 448-672 4-244 (539)
6 PRK10261 glutathione transport 100.0 4.7E-76 1E-80 763.6 56.4 229 1353-1582 312-553 (623)
7 TIGR03269 met_CoM_red_A2 methy 100.0 8.8E-75 1.9E-79 741.4 57.1 227 1354-1583 279-518 (520)
8 PRK13549 xylose transporter AT 100.0 4.7E-75 1E-79 741.0 52.2 214 448-665 4-225 (506)
9 PRK15134 microcin C ABC transp 100.0 4.6E-74 9.9E-79 735.7 57.0 227 1354-1582 275-515 (529)
10 PLN03140 ABC transporter G fam 100.0 2.3E-72 5.1E-77 772.4 77.3 825 465-1584 177-1116(1470)
11 PRK09700 D-allose transporter 100.0 1.8E-74 3.9E-79 736.8 50.9 215 448-666 4-228 (510)
12 PRK10762 D-ribose transporter 100.0 7E-74 1.5E-78 729.3 52.8 214 448-665 3-223 (501)
13 TIGR02633 xylG D-xylose ABC tr 100.0 2.2E-73 4.8E-78 725.6 51.1 211 450-664 2-222 (500)
14 PRK15439 autoinducer 2 ABC tra 100.0 4.7E-73 1E-77 722.1 53.3 212 448-667 10-224 (510)
15 PRK11288 araG L-arabinose tran 100.0 4.8E-73 1E-77 721.6 52.8 212 448-663 3-220 (501)
16 PRK10982 galactose/methyl gala 100.0 3E-72 6.5E-77 713.1 51.1 211 452-666 1-217 (491)
17 PRK10938 putative molybdenum t 100.0 4.3E-71 9.4E-76 702.8 47.5 207 449-667 3-219 (490)
18 PTZ00265 multidrug resistance 100.0 1.2E-68 2.6E-73 740.1 66.2 221 1354-1586 1165-1457(1466)
19 PRK15064 ABC transporter ATP-b 100.0 9E-69 1.9E-73 687.0 56.7 207 1353-1585 318-528 (530)
20 COG4172 ABC-type uncharacteriz 100.0 3.8E-69 8.3E-74 611.3 42.9 223 448-670 5-245 (534)
21 TIGR01257 rim_protein retinal- 100.0 8.3E-68 1.8E-72 724.8 61.5 567 153-778 1656-2253(2272)
22 PRK11819 putative ABC transpor 100.0 6.7E-68 1.4E-72 681.0 57.1 207 1353-1582 323-533 (556)
23 COG1129 MglA ABC-type sugar tr 100.0 2.4E-68 5.2E-73 643.4 49.2 212 448-663 7-225 (500)
24 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 5.1E-67 1.1E-71 672.9 56.2 208 1352-1582 320-531 (552)
25 PLN03130 ABC transporter C fam 100.0 1.3E-65 2.8E-70 716.4 70.3 215 1353-1583 1236-1462(1622)
26 PLN03232 ABC transporter C fam 100.0 2.6E-65 5.6E-70 714.4 69.3 217 1353-1585 1233-1461(1495)
27 COG3845 ABC-type uncharacteriz 100.0 1.6E-66 3.5E-71 611.9 46.2 211 448-662 3-219 (501)
28 TIGR00957 MRP_assoc_pro multi 100.0 4.7E-64 1E-68 702.7 75.9 217 1353-1585 1283-1511(1522)
29 PRK10636 putative ABC transpor 100.0 1.6E-65 3.4E-70 665.4 56.4 204 1352-1582 310-517 (638)
30 KOG0059 Lipid exporter ABCA1 a 100.0 8.4E-67 1.8E-71 695.5 42.8 564 174-777 298-878 (885)
31 PRK13409 putative ATPase RIL; 100.0 1.4E-65 3.1E-70 655.9 43.5 198 1353-1576 339-536 (590)
32 PRK11147 ABC transporter ATPas 100.0 7.3E-64 1.6E-68 651.8 57.1 206 1352-1580 317-526 (635)
33 PTZ00243 ABC transporter; Prov 100.0 6.8E-62 1.5E-66 678.5 73.8 215 1353-1583 1307-1534(1560)
34 TIGR01271 CFTR_protein cystic 100.0 1E-60 2.2E-65 667.1 82.9 215 1352-1583 1215-1441(1490)
35 PLN03073 ABC transporter F fam 100.0 3.1E-62 6.6E-67 634.9 51.2 204 1353-1582 507-714 (718)
36 KOG0054 Multidrug resistance-a 100.0 5.9E-61 1.3E-65 632.5 63.7 226 1345-1586 1129-1366(1381)
37 COG0488 Uup ATPase components 100.0 2.5E-62 5.4E-67 608.8 44.0 205 1351-1582 318-525 (530)
38 KOG0065 Pleiotropic drug resis 100.0 9E-55 1.9E-59 557.8 49.3 816 465-1579 127-1018(1391)
39 COG1126 GlnQ ABC-type polar am 100.0 5.9E-53 1.3E-57 449.9 25.5 220 449-672 2-225 (240)
40 COG4152 ABC-type uncharacteriz 100.0 8.6E-53 1.9E-57 452.5 26.4 297 1354-1688 2-298 (300)
41 COG4555 NatA ABC-type Na+ tran 100.0 1.6E-53 3.5E-58 446.5 18.5 225 1354-1585 1-225 (245)
42 COG1125 OpuBA ABC-type proline 100.0 1.1E-52 2.3E-57 454.8 22.7 221 449-673 1-226 (309)
43 COG1126 GlnQ ABC-type polar am 100.0 1.4E-51 3E-56 439.4 25.4 222 1354-1583 2-226 (240)
44 COG1131 CcmA ABC-type multidru 100.0 9.4E-51 2E-55 478.6 34.1 290 1354-1687 4-293 (293)
45 COG4555 NatA ABC-type Na+ tran 100.0 4.5E-52 9.7E-57 435.7 19.2 224 449-675 1-225 (245)
46 COG1125 OpuBA ABC-type proline 100.0 1.8E-51 3.9E-56 445.3 23.1 223 1354-1583 1-226 (309)
47 PRK13537 nodulation ABC transp 100.0 6E-50 1.3E-54 476.4 37.0 225 1353-1585 6-230 (306)
48 COG1135 AbcC ABC-type metal io 100.0 3.2E-51 6.9E-56 457.4 23.7 223 449-671 1-230 (339)
49 COG1135 AbcC ABC-type metal io 100.0 7.1E-51 1.5E-55 454.6 24.4 227 1354-1582 1-231 (339)
50 COG1131 CcmA ABC-type multidru 100.0 3.7E-49 8.1E-54 465.0 34.4 229 449-680 4-234 (293)
51 PRK13537 nodulation ABC transp 100.0 1.3E-48 2.9E-53 464.8 38.7 230 448-681 6-236 (306)
52 PRK13536 nodulation factor exp 100.0 8.8E-49 1.9E-53 470.8 37.3 228 1351-1586 38-265 (340)
53 COG4152 ABC-type uncharacteriz 100.0 2.7E-49 5.9E-54 425.5 28.2 295 449-776 2-297 (300)
54 PRK13536 nodulation factor exp 100.0 1.2E-47 2.7E-52 460.9 38.7 231 448-682 40-271 (340)
55 COG1127 Ttg2A ABC-type transpo 100.0 9.9E-49 2.1E-53 423.8 23.8 221 448-672 7-235 (263)
56 TIGR01188 drrA daunorubicin re 100.0 2.2E-47 4.8E-52 454.9 37.0 290 466-774 6-301 (302)
57 KOG0927 Predicted transporter 100.0 1.9E-48 4.1E-53 458.9 26.9 204 1353-1581 388-595 (614)
58 COG1127 Ttg2A ABC-type transpo 100.0 1.7E-48 3.6E-53 422.0 24.2 224 1352-1582 6-235 (263)
59 TIGR03522 GldA_ABC_ATP gliding 100.0 4.9E-47 1.1E-51 451.4 39.2 297 450-773 3-300 (301)
60 TIGR03522 GldA_ABC_ATP gliding 100.0 3E-47 6.5E-52 453.2 36.4 223 1354-1585 2-224 (301)
61 TIGR01188 drrA daunorubicin re 100.0 3.9E-47 8.5E-52 452.8 34.5 212 1373-1586 6-217 (302)
62 TIGR01288 nodI ATP-binding ABC 100.0 1.1E-46 2.4E-51 449.2 37.6 225 1353-1585 3-227 (303)
63 TIGR01288 nodI ATP-binding ABC 100.0 6.2E-46 1.3E-50 442.7 37.8 231 448-682 3-234 (303)
64 COG3839 MalK ABC-type sugar tr 100.0 2.1E-47 4.6E-52 446.1 24.3 223 449-676 3-227 (338)
65 COG1116 TauB ABC-type nitrate/ 100.0 3.2E-47 6.9E-52 419.9 23.1 204 448-659 2-207 (248)
66 COG1137 YhbG ABC-type (unclass 100.0 6.2E-48 1.3E-52 404.1 15.6 222 1353-1582 3-228 (243)
67 COG3839 MalK ABC-type sugar tr 100.0 8.3E-47 1.8E-51 441.1 26.1 226 1353-1586 2-227 (338)
68 COG3842 PotA ABC-type spermidi 100.0 3.5E-47 7.6E-52 446.5 22.1 221 448-673 4-227 (352)
69 COG1137 YhbG ABC-type (unclass 100.0 1.1E-47 2.3E-52 402.3 14.9 220 449-672 4-228 (243)
70 COG3842 PotA ABC-type spermidi 100.0 1.1E-46 2.4E-51 442.2 23.0 223 1353-1583 4-227 (352)
71 COG1116 TauB ABC-type nitrate/ 100.0 2.4E-46 5.1E-51 413.0 23.5 206 1353-1569 2-207 (248)
72 TIGR00956 3a01205 Pleiotropic 100.0 6E-42 1.3E-46 474.9 71.8 217 448-667 758-988 (1394)
73 TIGR02314 ABC_MetN D-methionin 100.0 1E-45 2.2E-50 443.2 29.1 224 449-672 1-230 (343)
74 COG1120 FepC ABC-type cobalami 100.0 3.2E-46 7E-51 420.8 23.2 221 1354-1581 2-227 (258)
75 TIGR02314 ABC_MetN D-methionin 100.0 1.8E-45 3.9E-50 441.1 30.2 226 1354-1582 1-230 (343)
76 COG1118 CysA ABC-type sulfate/ 100.0 2.3E-46 4.9E-51 417.1 20.7 226 449-679 2-234 (345)
77 PLN03140 ABC transporter G fam 100.0 4E-41 8.6E-46 464.2 76.8 217 449-667 867-1105(1470)
78 COG3638 ABC-type phosphate/pho 100.0 6.8E-46 1.5E-50 400.8 22.8 224 1353-1582 2-237 (258)
79 COG4175 ProV ABC-type proline/ 100.0 2.3E-46 5.1E-51 416.1 19.6 231 448-678 3-260 (386)
80 COG1118 CysA ABC-type sulfate/ 100.0 6.8E-46 1.5E-50 413.3 21.5 226 1354-1587 2-232 (345)
81 COG1122 CbiO ABC-type cobalt t 100.0 1.9E-45 4.1E-50 415.7 25.1 223 448-673 2-229 (235)
82 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.7E-45 3.7E-50 412.5 24.0 218 1353-1582 3-227 (254)
83 COG0411 LivG ABC-type branched 100.0 9E-46 2E-50 404.2 20.4 222 448-673 3-240 (250)
84 COG2884 FtsE Predicted ATPase 100.0 1.2E-45 2.6E-50 384.7 20.2 214 449-665 1-219 (223)
85 COG1124 DppF ABC-type dipeptid 100.0 3.5E-45 7.6E-50 399.1 23.5 226 1353-1583 2-232 (252)
86 COG1136 SalX ABC-type antimicr 100.0 8.6E-45 1.9E-49 401.7 27.0 214 1354-1571 1-220 (226)
87 COG1120 FepC ABC-type cobalami 100.0 4.4E-45 9.4E-50 411.7 24.9 228 449-680 2-242 (258)
88 COG1136 SalX ABC-type antimicr 100.0 7.2E-45 1.6E-49 402.3 26.0 211 450-661 2-220 (226)
89 PRK11432 fbpC ferric transport 100.0 1.2E-44 2.7E-49 436.2 30.4 224 1352-1583 4-227 (351)
90 COG1117 PstB ABC-type phosphat 100.0 1.9E-45 4.1E-50 389.8 20.3 219 448-671 6-236 (253)
91 COG3638 ABC-type phosphate/pho 100.0 4E-45 8.7E-50 394.8 23.2 222 448-672 2-237 (258)
92 COG2884 FtsE Predicted ATPase 100.0 2.1E-45 4.6E-50 382.9 20.2 216 1354-1576 1-220 (223)
93 TIGR03265 PhnT2 putative 2-ami 100.0 1.4E-44 3E-49 436.6 30.1 223 1353-1583 3-225 (353)
94 TIGR03265 PhnT2 putative 2-ami 100.0 1.2E-44 2.7E-49 437.0 28.9 221 448-673 3-225 (353)
95 PRK11650 ugpC glycerol-3-phosp 100.0 1.7E-44 3.6E-49 436.4 30.0 223 1354-1583 3-225 (356)
96 PRK11432 fbpC ferric transport 100.0 1.2E-44 2.6E-49 436.3 28.3 221 448-673 5-227 (351)
97 COG1122 CbiO ABC-type cobalt t 100.0 1.1E-44 2.3E-49 409.6 26.0 225 1353-1583 2-229 (235)
98 TIGR03258 PhnT 2-aminoethylpho 100.0 2.6E-44 5.5E-49 434.7 30.0 223 1354-1583 5-229 (362)
99 COG0411 LivG ABC-type branched 100.0 4.1E-45 8.9E-50 399.1 20.4 224 1353-1583 3-240 (250)
100 TIGR03258 PhnT 2-aminoethylpho 100.0 1.7E-44 3.8E-49 436.1 28.1 220 449-673 5-229 (362)
101 COG1124 DppF ABC-type dipeptid 100.0 6.7E-45 1.5E-49 396.9 21.8 224 448-673 2-232 (252)
102 PRK11650 ugpC glycerol-3-phosp 100.0 2.6E-44 5.5E-49 434.8 28.2 221 449-673 3-225 (356)
103 cd03261 ABC_Org_Solvent_Resist 100.0 5.5E-44 1.2E-48 411.6 28.3 221 1355-1582 1-226 (235)
104 cd03265 ABC_DrrA DrrA is the A 100.0 5.2E-44 1.1E-48 407.6 27.7 219 1355-1580 1-219 (220)
105 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2.5E-44 5.4E-49 403.2 23.9 215 448-670 3-225 (254)
106 PRK11153 metN DL-methionine tr 100.0 5.7E-44 1.2E-48 431.4 28.8 225 449-673 1-231 (343)
107 PRK11153 metN DL-methionine tr 100.0 7.7E-44 1.7E-48 430.3 29.9 227 1354-1583 1-231 (343)
108 cd03265 ABC_DrrA DrrA is the A 100.0 5.6E-44 1.2E-48 407.4 27.0 217 450-670 1-219 (220)
109 cd03261 ABC_Org_Solvent_Resist 100.0 6.5E-44 1.4E-48 411.0 27.4 219 450-672 1-226 (235)
110 PRK09452 potA putrescine/sperm 100.0 1.1E-43 2.5E-48 430.5 30.4 224 1352-1583 12-235 (375)
111 KOG0062 ATPase component of AB 100.0 6E-44 1.3E-48 418.9 26.8 200 1351-1573 359-559 (582)
112 COG4586 ABC-type uncharacteriz 100.0 2.2E-44 4.9E-49 393.8 21.6 241 1354-1595 3-259 (325)
113 COG4175 ProV ABC-type proline/ 100.0 1.3E-44 2.9E-49 402.2 19.9 232 1354-1586 4-258 (386)
114 PRK11607 potG putrescine trans 100.0 1.5E-43 3.3E-48 430.2 30.6 224 1352-1583 17-240 (377)
115 PRK09452 potA putrescine/sperm 100.0 9E-44 2E-48 431.3 28.4 221 448-673 13-235 (375)
116 PRK10851 sulfate/thiosulfate t 100.0 1.4E-43 3E-48 427.9 29.5 222 1354-1583 2-227 (353)
117 cd03266 ABC_NatA_sodium_export 100.0 1.2E-43 2.5E-48 404.3 26.9 216 450-665 2-218 (218)
118 COG1117 PstB ABC-type phosphat 100.0 4.1E-44 9E-49 379.6 21.0 221 1353-1583 6-238 (253)
119 PRK10851 sulfate/thiosulfate t 100.0 1.4E-43 3E-48 427.9 28.0 220 449-673 2-227 (353)
120 cd03263 ABC_subfamily_A The AB 100.0 1.6E-43 3.4E-48 403.8 26.9 219 450-670 1-219 (220)
121 PRK13637 cbiO cobalt transport 100.0 3.7E-43 7.9E-48 415.4 30.7 227 1354-1582 2-234 (287)
122 PRK11607 potG putrescine trans 100.0 1.7E-43 3.7E-48 429.8 28.5 221 448-673 18-240 (377)
123 PRK11000 maltose/maltodextrin 100.0 2.6E-43 5.6E-48 429.0 30.0 221 1354-1582 3-223 (369)
124 TIGR01186 proV glycine betaine 100.0 1.2E-43 2.7E-48 427.3 26.2 209 465-673 5-220 (363)
125 cd03259 ABC_Carb_Solutes_like 100.0 1.9E-43 4.2E-48 401.0 26.3 213 1355-1575 1-213 (213)
126 TIGR01186 proV glycine betaine 100.0 2.3E-43 5E-48 424.9 28.2 211 1372-1583 5-220 (363)
127 PRK11000 maltose/maltodextrin 100.0 2E-43 4.4E-48 429.9 28.0 219 449-672 3-223 (369)
128 cd03259 ABC_Carb_Solutes_like 100.0 1.6E-43 3.5E-48 401.7 24.9 211 450-665 1-213 (213)
129 PRK10070 glycine betaine trans 100.0 5.3E-43 1.1E-47 426.3 30.4 229 1354-1583 4-255 (400)
130 TIGR00960 3a0501s02 Type II (G 100.0 2.5E-43 5.3E-48 401.0 25.7 210 450-661 2-216 (216)
131 PRK13637 cbiO cobalt transport 100.0 5E-43 1.1E-47 414.3 29.0 224 449-672 2-234 (287)
132 PRK09536 btuD corrinoid ABC tr 100.0 6E-43 1.3E-47 426.1 30.3 227 1353-1587 2-239 (402)
133 cd03266 ABC_NatA_sodium_export 100.0 4.5E-43 9.8E-48 399.5 27.0 218 1354-1575 1-218 (218)
134 cd03258 ABC_MetN_methionine_tr 100.0 5.3E-43 1.1E-47 403.0 27.5 222 450-671 2-229 (233)
135 cd03296 ABC_CysA_sulfate_impor 100.0 6.3E-43 1.4E-47 403.7 28.0 221 1354-1582 2-226 (239)
136 PRK10070 glycine betaine trans 100.0 5.6E-43 1.2E-47 426.1 28.7 225 449-673 4-255 (400)
137 cd03258 ABC_MetN_methionine_tr 100.0 7.1E-43 1.5E-47 401.9 28.1 226 1354-1582 1-230 (233)
138 TIGR00960 3a0501s02 Type II (G 100.0 5.3E-43 1.2E-47 398.3 26.4 212 1354-1571 1-216 (216)
139 cd03263 ABC_subfamily_A The AB 100.0 7E-43 1.5E-47 398.5 27.0 220 1355-1581 1-220 (220)
140 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.1E-42 2.3E-47 401.1 28.7 223 1354-1584 1-223 (236)
141 cd03264 ABC_drug_resistance_li 100.0 6.4E-43 1.4E-47 396.2 26.4 211 450-665 1-211 (211)
142 TIGR03415 ABC_choXWV_ATP choli 100.0 1E-42 2.2E-47 420.8 29.6 228 1355-1583 1-255 (382)
143 cd03293 ABC_NrtD_SsuB_transpor 100.0 9E-43 2E-47 397.5 27.2 216 1355-1577 1-218 (220)
144 PRK13651 cobalt transporter AT 100.0 9.7E-43 2.1E-47 413.7 28.4 222 449-671 2-253 (305)
145 PRK13634 cbiO cobalt transport 100.0 1.4E-42 3E-47 411.1 29.6 225 1355-1582 3-235 (290)
146 PRK13643 cbiO cobalt transport 100.0 1.1E-42 2.4E-47 411.6 28.7 222 449-671 1-232 (288)
147 PRK09536 btuD corrinoid ABC tr 100.0 1.1E-42 2.3E-47 423.9 29.2 225 449-677 3-239 (402)
148 cd03219 ABC_Mj1267_LivG_branch 100.0 9.4E-43 2E-47 401.8 27.1 218 450-671 1-231 (236)
149 cd03301 ABC_MalK_N The N-termi 100.0 9.3E-43 2E-47 395.4 26.6 213 1355-1575 1-213 (213)
150 PRK13634 cbiO cobalt transport 100.0 1.2E-42 2.5E-47 411.8 28.3 221 450-671 3-234 (290)
151 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 5.9E-43 1.3E-47 398.5 24.8 211 450-661 1-218 (218)
152 TIGR03415 ABC_choXWV_ATP choli 100.0 9.5E-43 2.1E-47 421.1 28.0 209 465-673 36-255 (382)
153 cd03296 ABC_CysA_sulfate_impor 100.0 9.6E-43 2.1E-47 402.3 26.7 218 449-671 2-225 (239)
154 cd03293 ABC_NrtD_SsuB_transpor 100.0 8.9E-43 1.9E-47 397.5 26.0 214 450-667 1-218 (220)
155 cd03218 ABC_YhbG The ABC trans 100.0 1.1E-42 2.3E-47 400.2 26.9 217 450-670 1-220 (232)
156 PRK15079 oligopeptide ABC tran 100.0 1.4E-42 3E-47 416.1 28.9 226 448-673 7-252 (331)
157 PRK13647 cbiO cobalt transport 100.0 1.8E-42 3.9E-47 407.1 29.1 221 1354-1581 4-226 (274)
158 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.1E-42 2.5E-47 407.9 27.2 220 1356-1582 26-250 (269)
159 PRK15079 oligopeptide ABC tran 100.0 2.4E-42 5.2E-47 414.1 30.4 231 1352-1583 6-252 (331)
160 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 2E-42 4.3E-47 398.8 28.4 221 450-675 2-224 (236)
161 cd03218 ABC_YhbG The ABC trans 100.0 1.5E-42 3.3E-47 399.0 27.3 219 1355-1581 1-221 (232)
162 PRK13631 cbiO cobalt transport 100.0 2.7E-42 5.9E-47 412.2 30.3 229 1350-1582 17-265 (320)
163 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.1E-42 4.5E-47 400.2 28.4 222 1355-1582 1-225 (242)
164 cd03301 ABC_MalK_N The N-termi 100.0 9.6E-43 2.1E-47 395.3 25.2 211 450-665 1-213 (213)
165 cd03219 ABC_Mj1267_LivG_branch 100.0 1.7E-42 3.6E-47 399.7 27.4 220 1355-1582 1-232 (236)
166 PRK13643 cbiO cobalt transport 100.0 2.6E-42 5.7E-47 408.4 29.7 225 1354-1582 1-233 (288)
167 cd03256 ABC_PhnC_transporter A 100.0 1.9E-42 4.1E-47 400.6 27.9 222 1355-1582 1-234 (241)
168 PRK13646 cbiO cobalt transport 100.0 1.9E-42 4.2E-47 409.4 28.5 222 449-671 2-234 (286)
169 PRK13646 cbiO cobalt transport 100.0 2.9E-42 6.3E-47 407.8 29.4 226 1354-1582 2-235 (286)
170 PRK13650 cbiO cobalt transport 100.0 2.8E-42 6.1E-47 406.5 29.0 225 1354-1583 4-230 (279)
171 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.1E-42 4.6E-47 400.1 27.5 219 450-671 1-224 (242)
172 PRK13651 cobalt transporter AT 100.0 2.9E-42 6.2E-47 409.7 29.2 225 1354-1582 2-254 (305)
173 PRK11629 lolD lipoprotein tran 100.0 4.4E-42 9.4E-47 395.2 29.7 220 1353-1576 4-228 (233)
174 TIGR00972 3a0107s01c2 phosphat 100.0 2.9E-42 6.3E-47 400.2 28.5 218 449-671 1-231 (247)
175 cd03269 ABC_putative_ATPase Th 100.0 1.9E-42 4.1E-47 392.0 26.2 209 450-665 1-210 (210)
176 cd03260 ABC_PstB_phosphate_tra 100.0 1.3E-42 2.7E-47 398.3 24.9 215 450-669 1-226 (227)
177 COG0410 LivF ABC-type branched 100.0 1.9E-42 4E-47 375.5 24.6 223 1353-1583 2-227 (237)
178 PRK13647 cbiO cobalt transport 100.0 2.4E-42 5.2E-47 406.0 27.7 219 449-670 4-225 (274)
179 PRK13641 cbiO cobalt transport 100.0 3.2E-42 7E-47 407.6 28.9 222 449-671 2-233 (287)
180 PRK13635 cbiO cobalt transport 100.0 3.4E-42 7.4E-47 405.5 29.0 224 1353-1582 4-229 (279)
181 COG0410 LivF ABC-type branched 100.0 1.3E-42 2.8E-47 376.7 23.3 221 448-673 2-227 (237)
182 PRK13652 cbiO cobalt transport 100.0 4.9E-42 1.1E-46 404.3 30.1 223 1354-1582 3-227 (277)
183 PRK13636 cbiO cobalt transport 100.0 4.2E-42 9.1E-47 405.8 29.6 224 1353-1582 4-231 (283)
184 PRK13641 cbiO cobalt transport 100.0 4.7E-42 1E-46 406.2 30.0 225 1354-1582 2-234 (287)
185 PRK11629 lolD lipoprotein tran 100.0 3.6E-42 7.8E-47 395.9 28.2 218 448-666 4-228 (233)
186 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.6E-42 3.5E-47 395.0 25.0 213 1355-1571 1-218 (218)
187 PRK09493 glnQ glutamine ABC tr 100.0 4.2E-42 9.1E-47 397.3 28.6 221 1354-1582 1-225 (240)
188 PRK13631 cbiO cobalt transport 100.0 3.9E-42 8.4E-47 410.8 29.2 223 448-671 20-264 (320)
189 PRK09493 glnQ glutamine ABC tr 100.0 3.8E-42 8.2E-47 397.6 28.1 218 450-671 2-224 (240)
190 cd03256 ABC_PhnC_transporter A 100.0 2.6E-42 5.6E-47 399.4 26.5 219 450-671 1-233 (241)
191 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.6E-42 3.4E-47 406.8 25.0 218 451-672 26-250 (269)
192 PRK11831 putative ABC transpor 100.0 5E-42 1.1E-46 402.7 29.2 223 1353-1582 6-233 (269)
193 cd03268 ABC_BcrA_bacitracin_re 100.0 2.6E-42 5.7E-47 390.3 25.6 207 450-665 1-208 (208)
194 cd03260 ABC_PstB_phosphate_tra 100.0 2.8E-42 6.1E-47 395.4 26.2 215 1355-1579 1-226 (227)
195 PRK13650 cbiO cobalt transport 100.0 3.5E-42 7.6E-47 405.7 27.5 221 449-671 4-228 (279)
196 TIGR02673 FtsE cell division A 100.0 2.5E-42 5.4E-47 392.2 25.3 208 450-660 2-214 (214)
197 TIGR00955 3a01204 The Eye Pigm 100.0 8.7E-40 1.9E-44 424.5 52.0 210 464-675 36-259 (617)
198 PLN03211 ABC transporter G-25; 100.0 2.2E-39 4.7E-44 420.0 55.5 221 451-678 70-303 (659)
199 TIGR03411 urea_trans_UrtD urea 100.0 5.9E-42 1.3E-46 396.6 28.2 219 449-671 2-230 (242)
200 PRK13633 cobalt transporter AT 100.0 6.9E-42 1.5E-46 403.6 28.9 228 1353-1583 3-234 (280)
201 cd03264 ABC_drug_resistance_li 100.0 4.5E-42 9.7E-47 389.2 26.1 211 1355-1575 1-211 (211)
202 PRK11308 dppF dipeptide transp 100.0 7.2E-42 1.6E-46 409.7 29.0 227 448-674 4-246 (327)
203 TIGR02315 ABC_phnC phosphonate 100.0 4.4E-42 9.6E-47 397.9 26.3 222 1354-1581 1-234 (243)
204 PRK11308 dppF dipeptide transp 100.0 1.3E-41 2.8E-46 407.5 31.0 230 1353-1583 4-245 (327)
205 cd03269 ABC_putative_ATPase Th 100.0 5.9E-42 1.3E-46 388.0 26.5 210 1355-1575 1-210 (210)
206 TIGR00972 3a0107s01c2 phosphat 100.0 1E-41 2.2E-46 395.7 28.9 219 1354-1582 1-232 (247)
207 cd03268 ABC_BcrA_bacitracin_re 100.0 4.9E-42 1.1E-46 388.1 25.5 208 1355-1575 1-208 (208)
208 PRK11831 putative ABC transpor 100.0 8.9E-42 1.9E-46 400.6 28.5 221 448-672 6-233 (269)
209 PRK13636 cbiO cobalt transport 100.0 8.8E-42 1.9E-46 403.1 28.4 222 448-672 4-231 (283)
210 cd03292 ABC_FtsE_transporter F 100.0 5.4E-42 1.2E-46 389.5 25.6 209 450-661 1-214 (214)
211 PRK13644 cbiO cobalt transport 100.0 9.9E-42 2.1E-46 400.8 28.5 221 1354-1582 1-224 (274)
212 cd03224 ABC_TM1139_LivF_branch 100.0 7.2E-42 1.6E-46 390.7 26.6 218 1355-1582 1-221 (222)
213 cd03224 ABC_TM1139_LivF_branch 100.0 6.3E-42 1.4E-46 391.2 26.1 216 450-671 1-220 (222)
214 TIGR02673 FtsE cell division A 100.0 6.7E-42 1.5E-46 388.7 26.1 210 1354-1570 1-214 (214)
215 PRK11264 putative amino-acid A 100.0 9.8E-42 2.1E-46 396.7 28.0 219 449-671 3-232 (250)
216 PRK10908 cell division protein 100.0 8.3E-42 1.8E-46 390.1 26.7 210 450-662 2-216 (222)
217 PRK11248 tauB taurine transpor 100.0 1.1E-41 2.3E-46 396.3 28.1 214 1354-1578 1-216 (255)
218 PRK13548 hmuV hemin importer A 100.0 1.3E-41 2.7E-46 396.9 28.7 222 1354-1582 2-230 (258)
219 PRK14268 phosphate ABC transpo 100.0 1.3E-41 2.8E-46 397.1 28.8 220 448-672 11-242 (258)
220 PRK13635 cbiO cobalt transport 100.0 9.4E-42 2E-46 401.8 27.8 222 448-672 4-229 (279)
221 PRK13652 cbiO cobalt transport 100.0 1.2E-41 2.7E-46 400.9 28.7 221 449-672 3-227 (277)
222 PRK11264 putative amino-acid A 100.0 1.5E-41 3.2E-46 395.2 28.9 221 1354-1582 3-233 (250)
223 PRK13644 cbiO cobalt transport 100.0 9.5E-42 2.1E-46 401.0 27.5 219 449-671 1-223 (274)
224 PRK13632 cbiO cobalt transport 100.0 1.3E-41 2.7E-46 399.7 28.4 224 1353-1582 6-231 (271)
225 TIGR02315 ABC_phnC phosphonate 100.0 6.1E-42 1.3E-46 396.8 25.1 218 450-670 2-233 (243)
226 PRK10908 cell division protein 100.0 1.5E-41 3.3E-46 388.0 27.7 213 1354-1573 1-217 (222)
227 PRK13638 cbiO cobalt transport 100.0 1.6E-41 3.5E-46 399.1 28.3 221 1354-1582 1-225 (271)
228 TIGR03411 urea_trans_UrtD urea 100.0 1.8E-41 3.9E-46 392.5 28.4 219 1354-1581 2-230 (242)
229 cd03225 ABC_cobalt_CbiO_domain 100.0 9.2E-42 2E-46 386.7 25.2 208 1357-1570 2-211 (211)
230 PRK10895 lipopolysaccharide AB 100.0 1.2E-41 2.7E-46 393.6 26.8 219 449-671 3-225 (241)
231 cd03226 ABC_cobalt_CbiO_domain 100.0 5.5E-42 1.2E-46 386.7 23.2 203 451-662 1-205 (205)
232 PRK10895 lipopolysaccharide AB 100.0 1.4E-41 3E-46 393.2 27.0 221 1354-1582 3-226 (241)
233 PRK11022 dppD dipeptide transp 100.0 1.7E-41 3.7E-46 406.8 28.7 228 449-676 3-247 (326)
234 cd03225 ABC_cobalt_CbiO_domain 100.0 7.5E-42 1.6E-46 387.4 24.3 208 451-660 1-211 (211)
235 PRK11022 dppD dipeptide transp 100.0 2.3E-41 5.1E-46 405.5 29.9 227 1354-1583 3-244 (326)
236 TIGR02211 LolD_lipo_ex lipopro 100.0 1.3E-41 2.7E-46 388.4 26.1 212 450-662 2-220 (221)
237 TIGR02211 LolD_lipo_ex lipopro 100.0 1.8E-41 3.9E-46 387.2 27.2 215 1354-1572 1-220 (221)
238 PRK10619 histidine/lysine/argi 100.0 2.9E-41 6.3E-46 394.1 29.2 220 448-671 4-240 (257)
239 PRK13640 cbiO cobalt transport 100.0 2.5E-41 5.4E-46 399.1 29.0 225 1352-1582 3-232 (282)
240 PRK13638 cbiO cobalt transport 100.0 1.6E-41 3.4E-46 399.1 27.1 219 449-671 1-224 (271)
241 PRK11124 artP arginine transpo 100.0 2.2E-41 4.8E-46 391.7 27.8 218 449-670 2-228 (242)
242 PRK13639 cbiO cobalt transport 100.0 3E-41 6.4E-46 397.2 29.3 222 1354-1582 1-226 (275)
243 PRK13633 cobalt transporter AT 100.0 1.8E-41 3.8E-46 400.2 27.4 224 448-673 3-234 (280)
244 PRK10584 putative ABC transpor 100.0 3.2E-41 7E-46 386.9 28.7 218 1353-1574 5-227 (228)
245 PRK14242 phosphate transporter 100.0 2.6E-41 5.7E-46 393.7 28.4 219 448-671 5-236 (253)
246 PRK11248 tauB taurine transpor 100.0 1.8E-41 4E-46 394.4 27.0 211 449-667 1-215 (255)
247 cd03262 ABC_HisP_GlnQ_permease 100.0 1.3E-41 2.8E-46 386.1 25.1 208 450-661 1-213 (213)
248 PRK10619 histidine/lysine/argi 100.0 3.7E-41 8.1E-46 393.2 29.6 222 1353-1582 4-241 (257)
249 cd03292 ABC_FtsE_transporter F 100.0 1.8E-41 3.9E-46 385.3 26.0 210 1355-1571 1-214 (214)
250 cd03267 ABC_NatA_like Similar 100.0 1.7E-41 3.6E-46 390.8 26.1 204 1371-1575 32-236 (236)
251 PRK14273 phosphate ABC transpo 100.0 2.5E-41 5.5E-46 394.0 27.9 220 448-672 6-238 (254)
252 PRK13649 cbiO cobalt transport 100.0 2.8E-41 6.1E-46 399.0 28.5 222 449-671 2-233 (280)
253 PRK09473 oppD oligopeptide tra 100.0 3.1E-41 6.7E-46 404.8 29.2 229 448-676 11-255 (330)
254 PRK14267 phosphate ABC transpo 100.0 3E-41 6.5E-46 393.3 28.3 221 448-672 3-237 (253)
255 PRK14247 phosphate ABC transpo 100.0 3.3E-41 7.1E-46 392.2 28.5 219 449-671 3-233 (250)
256 cd03257 ABC_NikE_OppD_transpor 100.0 2E-41 4.2E-46 388.8 26.2 217 449-665 1-228 (228)
257 PRK11300 livG leucine/isoleuci 100.0 3.6E-41 7.9E-46 393.1 28.2 223 1353-1582 4-243 (255)
258 cd03226 ABC_cobalt_CbiO_domain 100.0 1.6E-41 3.5E-46 382.8 24.5 204 1356-1572 1-205 (205)
259 PRK13548 hmuV hemin importer A 100.0 3.4E-41 7.3E-46 393.3 27.9 219 449-671 2-229 (258)
260 PRK13648 cbiO cobalt transport 100.0 4.3E-41 9.4E-46 395.0 28.9 224 1353-1582 6-231 (269)
261 PRK09473 oppD oligopeptide tra 100.0 6.2E-41 1.3E-45 402.1 30.8 229 1352-1583 10-252 (330)
262 PRK10575 iron-hydroxamate tran 100.0 3.1E-41 6.7E-46 395.3 27.5 223 1352-1581 9-236 (265)
263 PRK14268 phosphate ABC transpo 100.0 5.1E-41 1.1E-45 392.1 29.1 221 1352-1582 10-242 (258)
264 cd03257 ABC_NikE_OppD_transpor 100.0 3.7E-41 8E-46 386.5 27.2 219 1354-1575 1-228 (228)
265 PRK11614 livF leucine/isoleuci 100.0 3.3E-41 7.2E-46 389.0 26.9 219 1353-1581 4-225 (237)
266 PRK15112 antimicrobial peptide 100.0 5.2E-41 1.1E-45 393.7 28.8 229 1353-1582 3-239 (267)
267 PRK11247 ssuB aliphatic sulfon 100.0 3.7E-41 7.9E-46 391.3 27.3 210 1352-1578 10-219 (257)
268 PRK13649 cbiO cobalt transport 100.0 6E-41 1.3E-45 396.2 29.6 225 1354-1582 2-234 (280)
269 PRK10584 putative ABC transpor 100.0 3.8E-41 8.3E-46 386.3 27.0 215 448-663 5-226 (228)
270 PRK11124 artP arginine transpo 100.0 5.3E-41 1.1E-45 388.6 28.4 220 1354-1581 2-229 (242)
271 TIGR03410 urea_trans_UrtE urea 100.0 3.3E-41 7.1E-46 387.4 26.4 217 1355-1581 1-220 (230)
272 cd03262 ABC_HisP_GlnQ_permease 100.0 2.9E-41 6.3E-46 383.3 25.6 209 1355-1571 1-213 (213)
273 cd03267 ABC_NatA_like Similar 100.0 2.1E-41 4.6E-46 389.9 24.7 201 465-665 33-236 (236)
274 COG3840 ThiQ ABC-type thiamine 100.0 6.5E-42 1.4E-46 353.3 18.2 215 450-672 2-219 (231)
275 PRK13639 cbiO cobalt transport 100.0 5.2E-41 1.1E-45 395.1 28.2 218 450-671 2-225 (275)
276 TIGR03005 ectoine_ehuA ectoine 100.0 6.3E-41 1.4E-45 390.2 28.6 221 1355-1582 1-236 (252)
277 PRK14235 phosphate transporter 100.0 8E-41 1.7E-45 392.1 29.1 219 448-671 18-250 (267)
278 PRK11614 livF leucine/isoleuci 100.0 4.3E-41 9.3E-46 388.1 26.4 218 448-671 4-225 (237)
279 cd03299 ABC_ModC_like Archeal 100.0 5.9E-41 1.3E-45 386.1 27.4 217 450-672 1-219 (235)
280 PRK13645 cbiO cobalt transport 100.0 5.4E-41 1.2E-45 398.0 27.9 222 449-671 6-239 (289)
281 cd03298 ABC_ThiQ_thiamine_tran 100.0 4.2E-41 9.2E-46 381.3 25.8 211 1355-1575 1-211 (211)
282 PRK13632 cbiO cobalt transport 100.0 4.7E-41 1E-45 394.9 27.0 221 448-671 6-230 (271)
283 PRK14267 phosphate ABC transpo 100.0 8.2E-41 1.8E-45 389.6 28.8 221 1353-1582 3-237 (253)
284 PRK11300 livG leucine/isoleuci 100.0 5.7E-41 1.2E-45 391.5 27.5 219 448-670 4-241 (255)
285 PRK13642 cbiO cobalt transport 100.0 8.9E-41 1.9E-45 393.6 29.4 225 1354-1583 4-230 (277)
286 cd03299 ABC_ModC_like Archeal 100.0 8.9E-41 1.9E-45 384.6 28.7 219 1355-1582 1-219 (235)
287 TIGR02769 nickel_nikE nickel i 100.0 8.1E-41 1.7E-45 391.8 28.7 228 1354-1582 2-240 (265)
288 PRK15112 antimicrobial peptide 100.0 5.4E-41 1.2E-45 393.5 27.2 225 448-672 3-239 (267)
289 TIGR03005 ectoine_ehuA ectoine 100.0 5.5E-41 1.2E-45 390.7 27.0 219 450-672 1-236 (252)
290 PRK10253 iron-enterobactin tra 100.0 6.1E-41 1.3E-45 392.8 27.4 222 1353-1581 6-232 (265)
291 TIGR03410 urea_trans_UrtE urea 100.0 4.1E-41 8.9E-46 386.5 25.3 214 450-670 1-219 (230)
292 PRK14241 phosphate transporter 100.0 9.2E-41 2E-45 390.1 28.7 220 449-672 4-242 (258)
293 TIGR02769 nickel_nikE nickel i 100.0 7.2E-41 1.6E-45 392.3 27.8 224 449-672 2-240 (265)
294 PRK13645 cbiO cobalt transport 100.0 9.1E-41 2E-45 396.1 28.9 226 1354-1582 6-240 (289)
295 cd03300 ABC_PotA_N PotA is an 100.0 9.6E-41 2.1E-45 383.7 28.2 220 1355-1582 1-220 (232)
296 PRK14274 phosphate ABC transpo 100.0 9.3E-41 2E-45 390.3 28.5 220 448-672 11-243 (259)
297 PRK14250 phosphate ABC transpo 100.0 7.3E-41 1.6E-45 386.8 27.3 217 1354-1582 3-221 (241)
298 COG4598 HisP ABC-type histidin 100.0 4.7E-42 1E-46 352.1 15.3 220 448-671 5-240 (256)
299 PRK14247 phosphate ABC transpo 100.0 1.1E-40 2.5E-45 387.7 28.9 220 1354-1582 3-234 (250)
300 PRK10744 pstB phosphate transp 100.0 9.5E-41 2.1E-45 390.3 28.4 220 448-672 12-244 (260)
301 PRK10771 thiQ thiamine transpo 100.0 7.6E-41 1.6E-45 384.7 27.1 219 1354-1582 1-219 (232)
302 PRK13648 cbiO cobalt transport 100.0 7.6E-41 1.6E-45 392.9 27.6 222 448-672 6-231 (269)
303 PRK14242 phosphate transporter 100.0 1.3E-40 2.7E-45 388.0 29.2 221 1352-1582 4-237 (253)
304 cd03300 ABC_PotA_N PotA is an 100.0 7.5E-41 1.6E-45 384.6 26.9 218 450-672 1-220 (232)
305 cd03298 ABC_ThiQ_thiamine_tran 100.0 4.3E-41 9.4E-46 381.2 24.3 209 450-665 1-211 (211)
306 PRK15093 antimicrobial peptide 100.0 1.2E-40 2.6E-45 400.8 29.5 228 1353-1583 2-249 (330)
307 PRK14269 phosphate ABC transpo 100.0 1E-40 2.3E-45 386.9 28.0 219 449-672 2-230 (246)
308 cd03235 ABC_Metallic_Cations A 100.0 2.7E-41 5.8E-46 383.4 22.4 205 452-665 2-213 (213)
309 PRK13642 cbiO cobalt transport 100.0 9.1E-41 2E-45 393.5 27.5 222 449-672 4-229 (277)
310 COG4586 ABC-type uncharacteriz 100.0 3.1E-41 6.7E-46 369.2 21.6 237 449-685 3-259 (325)
311 PRK14256 phosphate ABC transpo 100.0 1.3E-40 2.7E-45 387.7 28.1 220 449-672 4-236 (252)
312 PRK11144 modC molybdate transp 100.0 8.9E-41 1.9E-45 405.0 27.9 214 1354-1583 1-219 (352)
313 PRK10575 iron-hydroxamate tran 100.0 7.8E-41 1.7E-45 391.9 26.4 220 448-671 10-236 (265)
314 PRK11231 fecE iron-dicitrate t 100.0 1.1E-40 2.4E-45 388.8 27.5 220 1354-1581 2-226 (255)
315 PRK13640 cbiO cobalt transport 100.0 1.1E-40 2.3E-45 393.7 27.6 221 448-671 4-231 (282)
316 COG0444 DppD ABC-type dipeptid 100.0 5.8E-41 1.2E-45 382.4 24.3 230 450-679 2-250 (316)
317 PRK14270 phosphate ABC transpo 100.0 1.5E-40 3.2E-45 386.9 28.3 219 448-671 3-234 (251)
318 PRK14273 phosphate ABC transpo 100.0 1.6E-40 3.5E-45 387.2 28.6 220 1353-1582 6-238 (254)
319 PRK15093 antimicrobial peptide 100.0 1.1E-40 2.4E-45 401.1 28.1 225 449-673 3-249 (330)
320 TIGR00968 3a0106s01 sulfate AB 100.0 1.5E-40 3.3E-45 383.2 28.0 220 1355-1582 1-220 (237)
321 TIGR01277 thiQ thiamine ABC tr 100.0 1.3E-40 2.8E-45 377.7 26.9 212 1355-1576 1-212 (213)
322 TIGR00968 3a0106s01 sulfate AB 100.0 1E-40 2.3E-45 384.6 26.5 218 450-672 1-220 (237)
323 TIGR03873 F420-0_ABC_ATP propo 100.0 1E-40 2.3E-45 389.2 26.6 218 449-670 1-224 (256)
324 TIGR03873 F420-0_ABC_ATP propo 100.0 1.3E-40 2.8E-45 388.4 27.3 219 1355-1581 2-225 (256)
325 PRK11247 ssuB aliphatic sulfon 100.0 8.8E-41 1.9E-45 388.1 25.8 206 448-667 11-218 (257)
326 PRK14235 phosphate transporter 100.0 2.5E-40 5.4E-45 387.9 29.8 221 1352-1582 17-251 (267)
327 PRK09984 phosphonate/organopho 100.0 1.4E-40 3.1E-45 389.4 27.6 221 1353-1580 3-240 (262)
328 PRK11231 fecE iron-dicitrate t 100.0 1E-40 2.2E-45 389.0 26.2 218 449-670 2-225 (255)
329 cd03235 ABC_Metallic_Cations A 100.0 4.7E-41 1E-45 381.5 22.7 206 1357-1575 2-213 (213)
330 TIGR02142 modC_ABC molybdenum 100.0 1.3E-40 2.8E-45 404.3 27.9 214 1359-1583 4-222 (354)
331 PRK14259 phosphate ABC transpo 100.0 1.5E-40 3.2E-45 390.1 27.4 219 448-672 12-253 (269)
332 PRK14250 phosphate ABC transpo 100.0 1.1E-40 2.3E-45 385.5 25.7 215 449-672 3-221 (241)
333 PRK14245 phosphate ABC transpo 100.0 2.4E-40 5.3E-45 384.8 28.8 220 448-672 2-234 (250)
334 COG3840 ThiQ ABC-type thiamine 100.0 3.7E-41 8E-46 347.7 19.3 219 1354-1583 1-220 (231)
335 PRK11144 modC molybdate transp 100.0 1.1E-40 2.3E-45 404.4 26.8 211 450-673 2-219 (352)
336 PRK14240 phosphate transporter 100.0 2.2E-40 4.9E-45 385.2 28.5 218 449-671 3-233 (250)
337 TIGR01978 sufC FeS assembly AT 100.0 1.5E-40 3.2E-45 385.3 26.8 219 450-672 1-234 (243)
338 PRK10744 pstB phosphate transp 100.0 3.1E-40 6.8E-45 385.9 29.2 221 1352-1582 11-244 (260)
339 PRK10253 iron-enterobactin tra 100.0 1.3E-40 2.9E-45 390.0 26.1 220 448-671 6-232 (265)
340 TIGR02142 modC_ABC molybdenum 100.0 1.3E-40 2.8E-45 404.3 26.8 214 454-675 4-224 (354)
341 PRK14274 phosphate ABC transpo 100.0 3.2E-40 7E-45 385.7 29.1 221 1352-1582 10-243 (259)
342 TIGR03740 galliderm_ABC gallid 100.0 1.8E-40 3.9E-45 379.3 26.0 208 450-668 1-209 (223)
343 cd03297 ABC_ModC_molybdenum_tr 100.0 2.1E-40 4.6E-45 376.3 26.3 205 1359-1575 5-214 (214)
344 PRK14248 phosphate ABC transpo 100.0 3.5E-40 7.5E-45 387.3 29.0 220 448-672 20-252 (268)
345 PRK14262 phosphate ABC transpo 100.0 3.2E-40 6.9E-45 384.0 28.3 219 449-672 3-234 (250)
346 PRK09984 phosphonate/organopho 100.0 2E-40 4.3E-45 388.2 26.6 219 448-670 3-240 (262)
347 PRK14239 phosphate transporter 100.0 3.7E-40 8.1E-45 383.9 28.6 220 448-672 4-236 (252)
348 PRK10771 thiQ thiamine transpo 100.0 1.8E-40 4E-45 381.5 25.7 216 450-672 2-219 (232)
349 PRK14241 phosphate transporter 100.0 4.1E-40 8.8E-45 384.6 28.9 220 1354-1582 4-242 (258)
350 PRK14256 phosphate ABC transpo 100.0 5E-40 1.1E-44 382.6 29.4 221 1353-1582 3-236 (252)
351 TIGR01277 thiQ thiamine ABC tr 100.0 1.9E-40 4.1E-45 376.3 25.1 210 450-666 1-212 (213)
352 cd03297 ABC_ModC_molybdenum_tr 100.0 2.2E-40 4.7E-45 376.3 25.4 203 454-665 5-214 (214)
353 PRK11701 phnK phosphonate C-P 100.0 5.4E-40 1.2E-44 383.6 29.4 223 1353-1582 5-241 (258)
354 TIGR03740 galliderm_ABC gallid 100.0 3E-40 6.6E-45 377.5 26.6 210 1355-1579 1-210 (223)
355 PRK14270 phosphate ABC transpo 100.0 5.3E-40 1.1E-44 382.2 29.0 220 1353-1582 3-235 (251)
356 PRK14251 phosphate ABC transpo 100.0 3.9E-40 8.5E-45 383.4 27.9 219 449-672 4-235 (251)
357 PRK14269 phosphate ABC transpo 100.0 4.7E-40 1E-44 381.4 28.4 219 1354-1582 2-230 (246)
358 COG1245 Predicted ATPase, RNas 100.0 5.9E-40 1.3E-44 378.6 28.7 189 1354-1567 342-530 (591)
359 PRK14246 phosphate ABC transpo 100.0 4.3E-40 9.2E-45 383.4 28.1 221 448-672 9-241 (257)
360 PRK14259 phosphate ABC transpo 100.0 4.4E-40 9.5E-45 386.1 28.2 220 1352-1582 11-253 (269)
361 COG0444 DppD ABC-type dipeptid 100.0 2.7E-40 5.8E-45 377.0 25.3 230 1354-1586 1-247 (316)
362 TIGR01978 sufC FeS assembly AT 100.0 3.9E-40 8.4E-45 381.7 27.2 219 1355-1581 1-233 (243)
363 PRK14248 phosphate ABC transpo 100.0 8.1E-40 1.8E-44 384.1 29.8 222 1351-1582 18-252 (268)
364 COG4525 TauB ABC-type taurine 100.0 1.2E-40 2.6E-45 346.9 19.9 215 449-669 3-221 (259)
365 PRK14237 phosphate transporter 100.0 6.6E-40 1.4E-44 384.4 28.7 219 448-671 19-250 (267)
366 PRK14249 phosphate ABC transpo 100.0 6.6E-40 1.4E-44 381.4 28.3 220 448-672 3-235 (251)
367 PRK14245 phosphate ABC transpo 100.0 9E-40 2E-44 380.1 29.0 220 1353-1582 2-234 (250)
368 PRK14275 phosphate ABC transpo 100.0 6.7E-40 1.5E-44 387.4 28.4 220 448-672 38-270 (286)
369 PRK14261 phosphate ABC transpo 100.0 6.1E-40 1.3E-44 382.2 27.6 220 448-672 5-237 (253)
370 PRK14239 phosphate transporter 100.0 9.2E-40 2E-44 380.6 29.0 220 1353-1582 4-236 (252)
371 PRK14254 phosphate ABC transpo 100.0 8.4E-40 1.8E-44 386.1 28.9 219 447-671 37-268 (285)
372 PRK14272 phosphate ABC transpo 100.0 7.9E-40 1.7E-44 381.2 28.1 220 449-672 4-236 (252)
373 PRK14253 phosphate ABC transpo 100.0 7.1E-40 1.5E-44 380.8 27.5 218 449-671 3-232 (249)
374 PRK14260 phosphate ABC transpo 100.0 8.3E-40 1.8E-44 382.1 28.1 219 448-671 6-242 (259)
375 PRK13547 hmuV hemin importer A 100.0 6E-40 1.3E-44 384.3 26.8 221 1354-1581 1-243 (272)
376 KOG0058 Peptide exporter, ABC 100.0 8.2E-41 1.8E-45 410.6 20.3 221 448-675 464-694 (716)
377 PRK14240 phosphate transporter 100.0 1.2E-39 2.6E-44 379.1 29.1 219 1354-1582 3-234 (250)
378 PRK14236 phosphate transporter 100.0 1.1E-39 2.4E-44 383.4 29.0 219 448-671 24-255 (272)
379 PRK11701 phnK phosphonate C-P 100.0 9.3E-40 2E-44 381.6 28.1 221 448-672 5-241 (258)
380 PRK14262 phosphate ABC transpo 100.0 1.6E-39 3.4E-44 378.2 29.1 219 1354-1582 3-234 (250)
381 cd03234 ABCG_White The White s 100.0 6.2E-40 1.4E-44 375.6 25.3 215 449-665 3-226 (226)
382 PRK10418 nikD nickel transport 100.0 1.3E-39 2.8E-44 379.5 28.2 218 1354-1582 4-230 (254)
383 PRK14244 phosphate ABC transpo 100.0 1.1E-39 2.4E-44 379.6 27.5 218 450-672 6-237 (251)
384 PRK14238 phosphate transporter 100.0 1.1E-39 2.4E-44 383.0 27.6 220 448-672 23-255 (271)
385 PRK14275 phosphate ABC transpo 100.0 1.5E-39 3.3E-44 384.4 29.0 222 1351-1582 36-270 (286)
386 PRK14254 phosphate ABC transpo 100.0 2.1E-39 4.7E-44 382.7 29.8 221 1351-1582 36-269 (285)
387 PRK14251 phosphate ABC transpo 100.0 1.8E-39 3.8E-44 378.0 28.6 220 1353-1582 3-235 (251)
388 PRK14258 phosphate ABC transpo 100.0 2.1E-39 4.6E-44 379.0 29.3 221 1354-1582 7-245 (261)
389 COG4674 Uncharacterized ABC-ty 100.0 1.8E-40 4E-45 346.0 17.9 222 448-673 4-236 (249)
390 PRK14237 phosphate transporter 100.0 2.5E-39 5.4E-44 379.5 29.7 221 1352-1582 18-251 (267)
391 cd03252 ABCC_Hemolysin The ABC 100.0 3.9E-40 8.4E-45 380.2 22.5 219 450-674 1-227 (237)
392 TIGR02982 heterocyst_DevA ABC 100.0 1.1E-39 2.4E-44 372.0 25.8 211 450-661 2-219 (220)
393 PRK14271 phosphate ABC transpo 100.0 2.2E-39 4.7E-44 381.2 29.0 220 448-672 20-251 (276)
394 TIGR02770 nickel_nikD nickel i 100.0 1E-39 2.3E-44 374.7 25.5 206 1375-1582 1-215 (230)
395 COG4161 ArtP ABC-type arginine 100.0 3.5E-40 7.7E-45 332.4 18.8 216 449-668 2-226 (242)
396 PRK14272 phosphate ABC transpo 100.0 2.5E-39 5.4E-44 377.0 28.9 220 1354-1582 4-236 (252)
397 COG4181 Predicted ABC-type tra 100.0 4.3E-40 9.4E-45 336.1 19.6 216 1354-1573 6-226 (228)
398 cd03234 ABCG_White The White s 100.0 1.3E-39 2.9E-44 372.9 26.1 216 1354-1575 3-226 (226)
399 COG1123 ATPase components of v 100.0 7.2E-40 1.6E-44 398.7 25.3 229 447-675 278-522 (539)
400 PRK10419 nikE nickel transport 100.0 2.1E-39 4.5E-44 380.1 28.4 228 1354-1582 3-241 (268)
401 PRK14257 phosphate ABC transpo 100.0 2E-39 4.4E-44 388.5 28.8 222 448-672 79-313 (329)
402 cd03251 ABCC_MsbA MsbA is an e 100.0 7.3E-40 1.6E-44 377.2 23.9 220 450-675 1-228 (234)
403 PRK14243 phosphate transporter 100.0 1.4E-39 3.1E-44 380.9 26.5 219 448-672 9-248 (264)
404 TIGR02982 heterocyst_DevA ABC 100.0 1.9E-39 4.2E-44 370.0 26.8 214 1354-1571 1-219 (220)
405 PRK14236 phosphate transporter 100.0 3.6E-39 7.8E-44 379.1 29.9 220 1353-1582 24-256 (272)
406 TIGR03608 L_ocin_972_ABC putat 100.0 8.3E-40 1.8E-44 369.4 23.6 200 452-656 1-206 (206)
407 TIGR02323 CP_lyasePhnK phospho 100.0 2.6E-39 5.6E-44 377.0 28.4 223 1353-1582 2-238 (253)
408 PRK14253 phosphate ABC transpo 100.0 2.6E-39 5.5E-44 376.1 28.2 219 1354-1582 3-233 (249)
409 PRK10762 D-ribose transporter 100.0 8.6E-40 1.9E-44 416.7 26.6 220 1353-1580 3-228 (501)
410 PRK14249 phosphate ABC transpo 100.0 3.3E-39 7.1E-44 375.6 29.0 221 1353-1583 3-236 (251)
411 PRK14255 phosphate ABC transpo 100.0 2.8E-39 6.1E-44 376.4 28.4 220 448-672 4-236 (252)
412 PRK14261 phosphate ABC transpo 100.0 3E-39 6.5E-44 376.4 28.6 220 1353-1582 5-237 (253)
413 PRK13547 hmuV hemin importer A 100.0 1.4E-39 3E-44 381.2 25.8 217 450-670 2-242 (272)
414 cd03233 ABC_PDR_domain1 The pl 100.0 2.1E-39 4.6E-44 364.3 26.2 197 1354-1575 3-202 (202)
415 PRK14238 phosphate transporter 100.0 3.1E-39 6.6E-44 379.3 28.5 223 1350-1582 20-255 (271)
416 PRK10261 glutathione transport 100.0 1.7E-39 3.7E-44 422.1 29.1 225 448-672 312-553 (623)
417 TIGR01184 ntrCD nitrate transp 100.0 1.1E-39 2.5E-44 374.1 24.0 200 1376-1580 1-202 (230)
418 PRK14258 phosphate ABC transpo 100.0 3.4E-39 7.4E-44 377.2 28.3 220 448-672 6-245 (261)
419 PRK14260 phosphate ABC transpo 100.0 3.6E-39 7.9E-44 376.7 28.4 220 1353-1582 6-243 (259)
420 PRK13538 cytochrome c biogenes 100.0 1.3E-39 2.9E-44 366.9 23.7 201 449-656 1-202 (204)
421 TIGR02770 nickel_nikD nickel i 100.0 1.4E-39 3.1E-44 373.6 24.3 204 468-672 1-215 (230)
422 PRK14246 phosphate ABC transpo 100.0 4.2E-39 9E-44 375.1 28.4 222 1352-1582 8-241 (257)
423 PRK14265 phosphate ABC transpo 100.0 3.9E-39 8.5E-44 378.8 28.4 219 448-672 19-258 (274)
424 PRK14271 phosphate ABC transpo 100.0 5.5E-39 1.2E-43 377.7 29.4 220 1353-1582 20-251 (276)
425 PRK14263 phosphate ABC transpo 100.0 4.6E-39 1E-43 375.6 28.5 219 448-672 7-245 (261)
426 cd03252 ABCC_Hemolysin The ABC 100.0 1.2E-39 2.5E-44 376.2 23.1 219 1355-1584 1-227 (237)
427 PRK10418 nikD nickel transport 100.0 3.1E-39 6.7E-44 376.2 26.8 216 449-672 4-230 (254)
428 PRK10247 putative ABC transpor 100.0 2.1E-39 4.6E-44 370.7 24.8 213 1353-1576 6-221 (225)
429 cd03251 ABCC_MsbA MsbA is an e 100.0 1.7E-39 3.8E-44 374.1 24.3 220 1355-1585 1-228 (234)
430 cd03254 ABCC_Glucan_exporter_l 100.0 1.6E-39 3.5E-44 373.2 23.8 220 449-675 2-229 (229)
431 PRK00349 uvrA excinuclease ABC 100.0 2.8E-38 6.1E-43 415.3 38.7 128 1447-1583 791-928 (943)
432 PRK14257 phosphate ABC transpo 100.0 7E-39 1.5E-43 383.9 30.2 224 1351-1582 77-313 (329)
433 PRK13549 xylose transporter AT 100.0 1.9E-39 4.1E-44 414.1 26.9 220 1353-1580 4-230 (506)
434 PRK09700 D-allose transporter 100.0 2E-39 4.4E-44 414.5 27.0 220 1353-1580 4-232 (510)
435 COG4598 HisP ABC-type histidin 100.0 2.7E-40 5.8E-45 339.3 15.1 222 1353-1582 5-241 (256)
436 PRK14244 phosphate ABC transpo 100.0 4.8E-39 1E-43 374.2 27.6 218 1355-1582 6-237 (251)
437 TIGR03608 L_ocin_972_ABC putat 100.0 2.2E-39 4.8E-44 365.9 24.1 201 1357-1566 1-206 (206)
438 PRK14243 phosphate transporter 100.0 4.8E-39 1E-43 376.5 27.6 219 1353-1582 9-248 (264)
439 PRK14255 phosphate ABC transpo 100.0 7.7E-39 1.7E-43 372.8 29.1 220 1353-1582 4-236 (252)
440 PRK15439 autoinducer 2 ABC tra 100.0 3.3E-39 7.1E-44 411.7 28.1 217 1353-1581 10-228 (510)
441 PRK10419 nikE nickel transport 100.0 4.8E-39 1E-43 377.1 27.2 223 449-671 3-240 (268)
442 PRK14266 phosphate ABC transpo 100.0 6E-39 1.3E-43 373.3 27.7 220 449-673 3-235 (250)
443 TIGR02323 CP_lyasePhnK phospho 100.0 6E-39 1.3E-43 373.9 27.6 221 448-672 2-238 (253)
444 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.7E-39 3.8E-44 375.0 22.8 220 450-674 1-228 (238)
445 PRK13538 cytochrome c biogenes 100.0 3.2E-39 7E-44 363.7 24.4 202 1354-1566 1-202 (204)
446 COG4181 Predicted ABC-type tra 100.0 1.2E-39 2.6E-44 332.9 18.7 214 449-663 6-226 (228)
447 PRK14252 phosphate ABC transpo 100.0 8.2E-39 1.8E-43 375.0 28.6 219 448-671 15-248 (265)
448 PRK14265 phosphate ABC transpo 100.0 1E-38 2.2E-43 375.3 28.9 221 1351-1582 17-258 (274)
449 TIGR01184 ntrCD nitrate transp 100.0 2.4E-39 5.1E-44 371.5 22.9 195 469-667 1-199 (230)
450 PRK14263 phosphate ABC transpo 100.0 1.2E-38 2.6E-43 372.0 29.2 219 1353-1582 7-245 (261)
451 PRK13543 cytochrome c biogenes 100.0 4.8E-39 1E-43 365.0 24.9 202 448-658 10-212 (214)
452 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 4.3E-39 9.2E-44 367.7 24.5 201 450-665 23-224 (224)
453 cd03289 ABCC_CFTR2 The CFTR su 100.0 2.8E-39 6.2E-44 377.8 23.4 213 449-673 2-226 (275)
454 COG4604 CeuD ABC-type enteroch 100.0 1.9E-40 4.1E-45 346.4 11.9 219 449-671 1-224 (252)
455 cd03233 ABC_PDR_domain1 The pl 100.0 4.4E-39 9.6E-44 361.7 23.8 194 449-665 3-202 (202)
456 PRK13546 teichoic acids export 100.0 1.3E-38 2.8E-43 371.1 28.3 217 448-676 3-236 (264)
457 cd03245 ABCC_bacteriocin_expor 100.0 2.8E-39 6E-44 368.9 22.1 206 450-665 3-220 (220)
458 CHL00131 ycf16 sulfate ABC tra 100.0 1.2E-38 2.7E-43 371.1 27.9 219 448-670 6-239 (252)
459 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 8.5E-39 1.8E-43 365.2 25.9 202 1355-1575 23-224 (224)
460 PRK10247 putative ABC transpor 100.0 5.2E-39 1.1E-43 367.5 23.8 211 448-666 6-221 (225)
461 COG4525 TauB ABC-type taurine 100.0 3.9E-39 8.5E-44 335.7 20.5 222 1354-1585 3-226 (259)
462 PRK13543 cytochrome c biogenes 100.0 1.3E-38 2.8E-43 361.5 26.3 204 1352-1568 9-212 (214)
463 PRK14264 phosphate ABC transpo 100.0 1.7E-38 3.6E-43 378.7 28.5 220 448-672 44-289 (305)
464 COG4559 ABC-type hemin transpo 100.0 3.4E-39 7.3E-44 341.4 19.8 220 1354-1581 1-229 (259)
465 cd03254 ABCC_Glucan_exporter_l 100.0 6.8E-39 1.5E-43 368.0 24.2 218 1355-1584 3-228 (229)
466 PRK03695 vitamin B12-transport 100.0 6.7E-39 1.4E-43 371.8 24.3 212 1356-1581 2-221 (248)
467 cd03289 ABCC_CFTR2 The CFTR su 100.0 5.8E-39 1.2E-43 375.3 23.9 212 1355-1583 3-226 (275)
468 PRK15056 manganese/iron transp 100.0 1.1E-38 2.3E-43 375.1 26.1 219 1353-1581 5-229 (272)
469 COG2274 SunT ABC-type bacterio 100.0 1.8E-39 4E-44 416.6 21.0 218 448-675 470-699 (709)
470 PRK14266 phosphate ABC transpo 100.0 2.3E-38 4.9E-43 368.4 28.1 219 1354-1582 3-234 (250)
471 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 8.3E-39 1.8E-43 369.4 24.0 220 1355-1584 1-228 (238)
472 PRK13546 teichoic acids export 100.0 3.3E-38 7.2E-43 367.7 29.3 220 1353-1586 3-236 (264)
473 PRK03695 vitamin B12-transport 100.0 6.9E-39 1.5E-43 371.6 23.3 210 451-670 2-220 (248)
474 CHL00131 ycf16 sulfate ABC tra 100.0 2.6E-38 5.5E-43 368.5 28.2 219 1353-1579 6-238 (252)
475 TIGR03269 met_CoM_red_A2 methy 100.0 9.7E-39 2.1E-43 409.2 27.0 223 1355-1584 1-260 (520)
476 cd03245 ABCC_bacteriocin_expor 100.0 7.1E-39 1.5E-43 365.5 22.7 206 1355-1575 3-220 (220)
477 PRK15134 microcin C ABC transp 100.0 1.8E-38 3.9E-43 407.3 29.2 227 1353-1582 4-246 (529)
478 PRK14252 phosphate ABC transpo 100.0 3.7E-38 7.9E-43 369.5 29.0 221 1352-1582 14-249 (265)
479 TIGR02324 CP_lyasePhnL phospho 100.0 1.9E-38 4.2E-43 362.9 25.6 211 1354-1566 1-222 (224)
480 PRK15056 manganese/iron transp 100.0 1.5E-38 3.3E-43 373.9 25.1 217 448-670 5-228 (272)
481 TIGR02324 CP_lyasePhnL phospho 100.0 2E-38 4.3E-43 362.8 25.3 207 450-656 2-222 (224)
482 PRK11288 araG L-arabinose tran 100.0 1.8E-38 3.9E-43 404.7 27.5 217 1353-1577 3-224 (501)
483 PRK13545 tagH teichoic acids e 100.0 3.9E-38 8.4E-43 385.2 29.1 216 1353-1585 20-235 (549)
484 COG4988 CydD ABC-type transpor 100.0 4.2E-39 9E-44 389.7 20.0 218 449-677 320-548 (559)
485 PRK14264 phosphate ABC transpo 100.0 5.8E-38 1.3E-42 374.1 29.5 222 1351-1582 42-289 (305)
486 PRK09544 znuC high-affinity zi 100.0 2.4E-38 5.2E-43 367.0 25.5 204 1353-1581 3-208 (251)
487 cd03231 ABC_CcmA_heme_exporter 100.0 1.1E-38 2.4E-43 358.5 22.0 197 450-656 1-198 (201)
488 COG2274 SunT ABC-type bacterio 100.0 5.7E-37 1.2E-41 393.7 40.6 223 1353-1586 470-700 (709)
489 cd03248 ABCC_TAP TAP, the Tran 100.0 7.2E-39 1.6E-43 367.0 20.6 209 448-661 10-226 (226)
490 COG4559 ABC-type hemin transpo 100.0 1.6E-38 3.4E-43 336.4 21.3 227 449-679 1-243 (259)
491 cd03244 ABCC_MRP_domain2 Domai 100.0 1.1E-38 2.3E-43 364.3 21.9 206 450-666 3-220 (221)
492 cd03253 ABCC_ATM1_transporter 100.0 2.1E-38 4.5E-43 365.6 24.4 216 450-672 1-224 (236)
493 COG1129 MglA ABC-type sugar tr 100.0 1.5E-38 3.3E-43 385.1 24.2 217 1352-1576 6-228 (500)
494 TIGR02633 xylG D-xylose ABC tr 100.0 2.3E-38 5E-43 404.1 26.9 219 1354-1580 1-228 (500)
495 PRK10982 galactose/methyl gala 100.0 1.7E-38 3.8E-43 404.1 25.3 216 1357-1580 1-221 (491)
496 KOG0066 eIF2-interacting prote 100.0 2.9E-38 6.4E-43 358.9 24.2 192 1353-1571 585-779 (807)
497 cd03231 ABC_CcmA_heme_exporter 100.0 2.2E-38 4.7E-43 356.1 22.8 198 1355-1566 1-198 (201)
498 COG4604 CeuD ABC-type enteroch 100.0 1.3E-39 2.8E-44 340.2 11.8 222 1354-1582 1-225 (252)
499 COG4161 ArtP ABC-type arginine 100.0 8.9E-39 1.9E-43 322.3 17.5 219 1354-1580 2-228 (242)
500 PRK13545 tagH teichoic acids e 100.0 5.3E-38 1.1E-42 384.0 27.9 214 448-674 20-234 (549)
No 1
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.5e-216 Score=2184.54 Aligned_cols=1540 Identities=32% Similarity=0.530 Sum_probs=1168.8
Q ss_pred eeccCcccccc-----ccCCCeeEEEEEecC------CCCceEEEEEecccccccCCCcccccc---cCCCCCCcccccC
Q 000284 21 HLYGTCSQVKD-----CLNPKIKGAVVFHDQ------GPELFDYSIRLNHTWAFSGFPDVKTIM---DTNGPYLNDLELG 86 (1723)
Q Consensus 21 ~~~~~~~~~~~-----~~~~~~~~~VvF~~~------~p~~~~Y~iR~~~~~~~~~~p~~~~~~---~~~~~~~~~~~~g 86 (1723)
+++.+++.+.+ -.++++||||+|++. .|.+++|+||||.+. .|+++... ..+||+....
T Consensus 526 ~~~~~~~~~~~~~~~l~~~~~~~agI~F~~~~~~~~~~p~~v~y~IR~~~~~----~~~t~~~~~~~w~~g~~~~~~--- 598 (2272)
T TIGR01257 526 ESYDDEVQLTQRALSLLEENRFWAGVVFPDMYPWTSSLPPHVKYKIRMDIDV----VEKTNKIKDRYWDSGPRADPV--- 598 (2272)
T ss_pred ecCCCHHHHHHHHHHHhhcCCeEEEEEeCCCcccccCCCCceEEEEecCccc----cCcchhhccccccCCCCCCcc---
Confidence 44555544222 345679999999764 368899999999752 23333221 2246654221
Q ss_pred CCCcCCccchhhhchHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCCcccCCCCccccCCcceeEeccCCCccCch
Q 000284 87 VNIIPTMQYSFSGFLTLQQVLDSFIIFAAQQTGANVATENVEIPPSNLSGTHLSLKQPWTLYSPSNIRMVPFPTREYTDD 166 (1723)
Q Consensus 87 ~~~~~~~~Y~~~GFl~LQ~~id~aii~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~fp~~~~~~d 166 (1723)
.+.+|+++||++||++||+|||+...+. . ....+++++||+|+|.+|
T Consensus 599 ----~~~~Y~~~GFl~lQ~ai~~aii~~~~~~----~-------------------------~~~~v~~q~~P~P~y~~d 645 (2272)
T TIGR01257 599 ----EDFRYIWGGFAYLQDMVEQGITRSQMQA----E-------------------------PPVGIYLQQMPYPCFVDD 645 (2272)
T ss_pred ----ccccHHHhhHHHHHHHHHHHHHHhhcCC----C-------------------------cccceeeeeCCCCCeecc
Confidence 1248999999999999999999753211 0 012467899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHhhHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHH-hhcccc
Q 000284 167 EFQSIIKRVMGVLYLLGFLYPISRLISYSVFEKEQKIREGLYMMGLKDGIFHLSWFITYAAQFAVSSGIITAC-TMDSLF 245 (1723)
Q Consensus 167 ~~~~~~~~~~~~~~~l~~~~~~~~~v~~iV~EKe~~lke~m~~mGl~~~~~wlsw~i~~~~~~~i~~~ii~~~-~~~~~~ 245 (1723)
.|...+..++|++++++|+|+++.+++.||.|||+|+||+||||||++++||+|||+.+++.+++++++++++ ....+|
T Consensus 646 ~~l~~~~~~~pl~~~la~~~~~~~lv~~iV~EKE~rlKE~MkiMGL~~~~~w~sWfi~~~~~~~i~~~l~~~il~~~~~~ 725 (2272)
T TIGR01257 646 SFMIILNRCFPIFMVLAWIYSVSMTVKSIVLEKELRLKETLKNQGVSNAVIWCTWFLDSFSIMSMSIFLLTIFIMHGRIL 725 (2272)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcee
Confidence 9999999999999999999999999999999999999999999999999999999999998888877776654 456799
Q ss_pred cccCchhhHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHhhhhhc--cCCCchhHHhHHHhhhchhHHHHH
Q 000284 246 KYSDKTVVFTYFFSFGLSAITLSFFISTFFARAKTAVAVGTLSFLGAFFPYYTV--NDEAVPMVLKVIASLLSPTAFALG 323 (1723)
Q Consensus 246 ~~s~~~~~f~~~~l~~~s~i~~~~~iS~fF~~~~~a~~~~~l~~~~~~~p~~~~--~~~~~~~~~~~~~~l~~~~~~~~g 323 (1723)
++|+++++|+++++|++++|+||||+|+||+|+++|+++++++||+.++|+++. ..+..+...++++||+||+||++|
T Consensus 726 ~~s~~~~lfl~~~~y~~s~I~~~fliS~fFska~~A~~~~~li~f~~~lp~~~~~~~~~~~~~~~~~~~sL~sp~af~~g 805 (2272)
T TIGR01257 726 HYSDPFILFLFLLAFSTATIMQCFLLSTFFSKASLAAACSGVIYFTLYLPHILCFAWQDRMTADLKTAVSLLSPVAFGFG 805 (2272)
T ss_pred ecCChHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhcccccCHHHHHHHHhcCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998642 344556678999999999999999
Q ss_pred HHHHHHHhhcccCccccccccCC---CCchHHHHHHHHHHHHHHHHHHHHHhhccccCCCCccccccccccccccCcccc
Q 000284 324 SVNFADYERAHVGLRWSNMWRAS---SGVNFLVCLLMMLLDTLLYGVIGLYLDKVLPKENGVRYRWNFIFQNCFRRKKSV 400 (1723)
Q Consensus 324 ~~~~~~~e~~~~g~~~~~~~~~~---~~~~~~~~~~~l~~d~~ly~~l~~yld~v~p~~~G~~~p~~f~~~~~~w~~~~~ 400 (1723)
+..++.+|.++.|++|+|++.++ ++++++.+++||++|+++|++|+||+|+|+||+||+++||||||+++||+++..
T Consensus 806 ~~~i~~~e~~~~G~~w~n~~~~~~~~d~~s~~~~~~ml~~d~~lY~lL~~Yld~V~PgeyG~~kpw~F~~~~syW~~~~~ 885 (2272)
T TIGR01257 806 TEYLVRFEEQGLGLQWSNIGNSPLEGDEFSFLLSMKMMLLDAALYGLLAWYLDQVFPGDYGTPLPWYFLLQESYWLGGEG 885 (2272)
T ss_pred HHHHHHHhhhCCCcccccccccccCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCcccccchhhhcCCcc
Confidence 99999999999999999998643 457899999999999999999999999999999999999999999999987532
Q ss_pred cccccchhhHHhhhhhhhhhhhhhhcc-cCchhhhhhhhcccccccCcceEEEEeEEEEecCcCCccceeeeeeEEEeCC
Q 000284 401 IKHHVSSAEVKINKKLSKEKECAFALD-ACEPVVEAISLDMKQQEVDGRCIQIRKLHKVYATKRGNCCAVNSLQLTLYEN 479 (1723)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~G 479 (1723)
........... .+...++..+....+ .....+|+ ++.+ ....|+++||+|.|++ +++.||+|+||++++|
T Consensus 886 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~E~-----~~~~-~~~~L~I~nLsK~y~~--~~k~aL~~lsl~I~~G 956 (2272)
T TIGR01257 886 CSTREERALEK-TEPLTEEMEDPEHPEGINDSFFER-----ELPG-LVPGVCVKNLVKIFEP--SGRPAVDRLNITFYEN 956 (2272)
T ss_pred ccccccccccc-cccccccccccccccccccccccc-----ccCC-CCceEEEEeEEEEecC--CCceEEEeeEEEEcCC
Confidence 10000000000 000000000000000 00001111 1111 1258999999999953 2357999999999999
Q ss_pred cEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHH
Q 000284 480 QILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEE 559 (1723)
Q Consensus 480 ei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~ 559 (1723)
|+++|+||||||||||+++|+|+++|++|+|+++|+++..+..++|+.+|||||++.+++.+||+||+.++++++|.+.+
T Consensus 957 ei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~ 1036 (2272)
T TIGR01257 957 QITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKGRSWE 1036 (2272)
T ss_pred cEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcCCCHH
Confidence 99999999999999999999999999999999999999877777889999999999999999999999999999988777
Q ss_pred HHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEE
Q 000284 560 LLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLT 639 (1723)
Q Consensus 560 ~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~ 639 (1723)
+.+++++++++.+||.++.++++++|||||||||+||+||+++|+||||||||+||||.+|+.+|++|+++++|+|||++
T Consensus 1037 ~~~~~v~~lL~~vgL~~~~~~~~~~LSGGqKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIlt 1116 (2272)
T TIGR01257 1037 EAQLEMEAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMS 1116 (2272)
T ss_pred HHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEE
Confidence 77888999999999999999999999999999999999999999999999999999999999999999999889999999
Q ss_pred cCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhhhCCcEEEEEEecCC--------------------------------
Q 000284 640 THSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGVGYTLTLVKSAP-------------------------------- 687 (1723)
Q Consensus 640 TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~g~gy~l~~~~~~~-------------------------------- 687 (1723)
||+|++++.+||||++|++|+++|.|++.+||++||.||+++++++..
T Consensus 1117 THdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~~g~gy~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1196 (2272)
T TIGR01257 1117 THHMDEADLLGDRIAIISQGRLYCSGTPLFLKNCFGTGFYLTLVRKMKNIQSQRGGCEGTCSCTSKGFSTRCPARVDEIT 1196 (2272)
T ss_pred ECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHhcCCcEEEEEEeccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999986531
Q ss_pred -------ChhhHHHHHHhhCCCceEEeeeCcEEEEEecCCCc--chHHHHHHHHHHhhhhccccccccccccccCCCeeE
Q 000284 688 -------DASAAADIVYRHIPSALCVSEVGTEITFKLPLASS--SSFESMFREIESCIRKSVSKVEADATEDTDYLGIES 758 (1723)
Q Consensus 688 -------~~~~~~~~~~~~~p~~~~~~~~~~~~~~~lp~~~~--~~~~~l~~~le~~~~~~~~~~~~~~~~~~~~~~i~~ 758 (1723)
+.+.+.+++++|+|++++.++.+.+++|.+|.+.. ..|+.+|++||+.. +++||.+
T Consensus 1197 ~~~~~~~~~~~i~~~v~~~iP~a~l~~~~g~el~y~LP~~~~~~~~f~~lf~~Le~~~---------------~~lgi~s 1261 (2272)
T TIGR01257 1197 PEQVLDGDVNELMDLVYHHVPEAKLVECIGQELIFLLPNKNFKQRAYASLFRELEETL---------------ADLGLSS 1261 (2272)
T ss_pred ccccccccHHHHHHHHHHhCCCcEEEeccCCEEEEEecccccccchHHHHHHHHHhhH---------------hhCCCce
Confidence 23456788999999999999999999999999875 46999999999753 4799999
Q ss_pred EEecCCCHHHHHHHHhcCCCcchh--hhhhccccccc--cc--cccccCCCCcccccc-ccccCCcccccceeeeeecch
Q 000284 759 FGISVTTLEEVFLRVAGCNLDESE--CISQRNNLVTL--DY--VSAESDDQAPKRISN-CKLFGNYKWVFGFIVTVVQRA 831 (1723)
Q Consensus 759 ~~is~ttLEevfl~~~~~~~~~~~--~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 831 (1723)
|++|+|||||||||++++...+.. ...+....... .. .......+.+..... ....... ... ....
T Consensus 1262 ygis~tTLEeVFlkv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~ 1334 (2272)
T TIGR01257 1262 FGISDTPLEEIFLKVTEDADSGSLFAGGAQQKRENANLRHPCSGPTEKAGQTPQASHTCSPGQPAA-HPE------GQPP 1334 (2272)
T ss_pred EEeecCCHHHHHHHhhhhcccccccccccccccccccccccccccccccccccccccccccccccc-ccc------cccc
Confidence 999999999999999875432110 00000000000 00 000000000000000 0000000 000 0000
Q ss_pred hhhhhHHhhhhhhhhcccccccccccchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhccCC-CCCC
Q 000284 832 CTLIVAAVLGFLNFLIKKCCTCCIISRSMFWQHCKALFIKRAVSARRDRKTIVFQLLIPAIFLLVGLLFLKLKPH-PDML 910 (1723)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~all~KR~~~~~R~~~~~~~~lllP~~~~~~~l~~~~~~~~-~~~~ 910 (1723)
. . ..........+..+++||++||++||+++++||||.+++|+++|++|+++++++....+. .+.|
T Consensus 1335 ~-----------~--~~~~~~~~~tg~~L~~qQf~All~KR~~~~~Rd~k~~~~qillPi~fv~lal~~~~~~~~~~~~p 1401 (2272)
T TIGR01257 1335 P-----------E--PEDPGVPLNTGARLILQHVQALLVKRFQHTIRSHKDFLAQIVLPATFVFLALMLSIIIPPFGEYP 1401 (2272)
T ss_pred c-----------c--ccccccccccchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhcccccCCC
Confidence 0 0 000001123467899999999999999999999999999999999999999988877553 3567
Q ss_pred ccccccccCCcccCCC--------------------CCCCCccc--------c--cCchh-----hhhhhhhh-ccCccc
Q 000284 911 SVTFTTSNFNPLLSGG--------------------GGGGPIPF--------D--LSWPI-----ANEVSKYI-QGGWIQ 954 (1723)
Q Consensus 911 ~~~l~~~~~~~~~~~~--------------------~~~~~~~~--------~--~~~~~-----~~~~~~~~-~~~~~~ 954 (1723)
++++++..|....... ++.+.... . ...+. ...+...+ ...|..
T Consensus 1402 ~l~Ls~~~Y~~~~~~~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1481 (2272)
T TIGR01257 1402 ALTLHPWMYGQQYTFFSMDEPNSEHLEVLADVLLNKPGFGNRCLKEEWLPEYPCGNSTPWKTPSVSPNITHLFQKQKWTA 1481 (2272)
T ss_pred CeecchhhccCcceeccccccccccccchhhhhhcccccccccccccccccccccccccccccchhHHHHHHHhhccccc
Confidence 7888777663221100 00000000 0 00000 00000000 000110
Q ss_pred ccccCCCCCC--ChHHHHHHHHHhcCCCCc-------------cchhchhHHHHHhhhhcc-----------cccccEEE
Q 000284 955 RFKQSSYRFP--NAEKALADAVDAAGPTLG-------------PVLLSMSEYLMSSFNESY-----------QSRYGAIV 1008 (1723)
Q Consensus 955 ~~~~~~~~~~--~~~~~l~~~~~~~~~~~~-------------~~~~~~~~~l~~~~~~~~-----------~~~~g~~~ 1008 (1723)
......+.|. .......++....+.... ....++++|+...++... ..|||++.
T Consensus 1482 ~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~n~sdyll~~~~~~~~~~~~~~~~~~~~ry~~~s 1561 (2272)
T TIGR01257 1482 AHPSPSCRCSTREKLTMLPECPEGAGGLPPPQRTQRSTEILQDLTDRNISDFLVKTYPALIRSSLKSKFWVNEQRYGGIS 1561 (2272)
T ss_pred cccccccccccccccccccccccccccCCCcccccccchhhhhhcccchHHHHhhhhhhhhccccccccccccccccccc
Confidence 0000000000 000000001111000000 012345677665443211 24555442
Q ss_pred eeccC------------------------------------------CCCceeEEEEeCCcCCChHHHHHHHHHHHHHHH
Q 000284 1009 MDDQN------------------------------------------DDGSLGFTVLHNSSCQHAGPTFINVMNTAILRL 1046 (1723)
Q Consensus 1009 ~~~~~------------------------------------------~~~~~~~~~~~N~~~~hs~p~~ln~l~nailr~ 1046 (1723)
.+... ..+...+++|||++++|++|+++|+++||++|.
T Consensus 1562 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vwfNn~~~Hs~p~~lN~l~NaiLr~ 1641 (2272)
T TIGR01257 1562 IGGKLPAIPITGEALVGFLSDLGQMMNVSGGPVTREASKEMPDFLKHLETEDNIKVWFNNKGWHALVSFLNVAHNAILRA 1641 (2272)
T ss_pred cccccccccccchhhhhhhhhcccccccccccccccccchhhhhhhccccCcceEEEEcCCcccHHHHHHHHHHHHHHHH
Confidence 22100 011235689999999999999999999999999
Q ss_pred hcCC----CcceEEEEeecCCcchhhhhhh---chhhhhHHHHHHHHHHHHhhhHhhhHHHHHHHHHHHHHHHHhCCchH
Q 000284 1047 ATGN----RNMTIRTRNHPLPTTQSQQLQR---HDLDAFSVSIIISIAFSFIPASFAVAIVKEREVKAKQQQLISGVSVL 1119 (1723)
Q Consensus 1047 ~~~~----~~~~I~~~n~Plp~~~~~~~~~---~~~~~~~~~i~i~~~~s~i~a~f~~~~V~ER~~k~k~lq~vsGv~~~ 1119 (1723)
..++ .+.+|++.|||+|.+..+.... .......++++++++|+|+|++|++++|+||++|+||+|++||+++.
T Consensus 1642 ~~~~~~~~~~~~I~v~N~Plp~t~~~~~~~~~~~~~~~~~iai~ii~~~sfi~asfv~~~V~ER~skaK~lQ~vSGv~~~ 1721 (2272)
T TIGR01257 1642 SLPKDRDPEEYGITVISQPLNLTKEQLSEITVLTTSVDAVVAICVIFAMSFVPASFVLYLIQERVNKAKHLQFISGVSPT 1721 (2272)
T ss_pred hcccccCCccceEEEEecCCCCchhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHheeeehHHhhhHHHHHHHhCCCcH
Confidence 7542 3578999999999876442211 11223456888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHH
Q 000284 1120 SYWTSTYIWDFISFLFPSSCAIILFYIFGLDQFVGRGCLLPTVLIFLGYGLAIASSTYCLTFFFSDHTMAQNVVLLVHFF 1199 (1723)
Q Consensus 1120 ~YW~s~~i~D~i~~li~~~~~iii~~~f~~~~~~~~~~~~~~~lllllyG~a~i~~~Yl~Sf~F~~~~~a~~~~~~~~~~ 1199 (1723)
+||+++|+||+++|+++++++++++++|+.+.|.+..++..+++++++||+|++|++|++||+|+++++|+..+.+++++
T Consensus 1722 ~YWls~fl~D~~~y~i~~~~~i~i~~~f~~~~~~~~~~l~~~~lll~lyG~a~ip~tYl~SflF~~~~~A~~~~~~in~~ 1801 (2272)
T TIGR01257 1722 TYWLTNFLWDIMNYAVSAGLVVGIFIGFQKKAYTSPENLPALVALLMLYGWAVIPMMYPASFLFDVPSTAYVALSCANLF 1801 (2272)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHHhhccchhhhhhhHHHHHHHhhc------ccCCCCCCccccccchhhHHH
Q 000284 1200 TGLILMVISFIMGLLEA---TRSANSLLKNFFRLSPGFCFADGLASLALLRQG------MKDKTSDGVFDWNVTSASICY 1270 (1723)
Q Consensus 1200 ~g~~~~i~~~il~~~~~---~~~~~~~l~~~f~l~P~~~l~~gl~~l~~~~~~------~~~~~~~~~~~~~~~g~~i~~ 1270 (1723)
+|++..++.+++..+.. ....+..++++|+++|.||+++|++++...... .......++++|+..|.+++|
T Consensus 1802 ~G~~~~i~~~il~~~~~~~~~~~~~~~l~~if~i~P~f~lg~gl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ll~ 1881 (2272)
T TIGR01257 1802 IGINSSAITFVLELFENNRTLLRFNAMLRKLLIVFPHFCLGRGLIDLALSQAVTDVYAQFGEEHSANPFQWDLIGKNLVA 1881 (2272)
T ss_pred HHHHHHHHHHHHHHhcccchhhhHHHHHHHHHeeCchhhhHHHHHHHHHhHHHHHHHHhhcccccCCccchhhccHHHHH
Confidence 99999988888876532 344577889999999999999999988754321 112223467899999999999
Q ss_pred HHHHHHHHHHHHHHHHhccccchhhhHHhhhhccccccccCCCCCCCcccccCCCCCCcCCCCcchhhHHHhhhcccCCC
Q 000284 1271 LGCESICYFLLTLGLELLPSHKWTLMTIKEWWKGTRHRLCNTPSSYLEPLLQSSSESDTLDLNEDIDVQVERNRVLSGSV 1350 (1723)
Q Consensus 1271 l~~~~i~~~ll~l~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eD~dV~~Er~rv~~~~~ 1350 (1723)
|++++++|+++++++|+.... . .|... .. .+ ...+||+||++||+||.+...
T Consensus 1882 m~~~~iv~flLl~~ie~~~~~-------~-~~~~~--------~~-~~-----------~~~~eD~DV~~Er~rV~~~~~ 1933 (2272)
T TIGR01257 1882 MAVEGVVYFLLTLLIQHHFFL-------S-RWIAE--------PA-KE-----------PIFDEDDDVAEERQRIISGGN 1933 (2272)
T ss_pred HHHHHHHHHHHHHHHHhhhhh-------h-hhccc--------cC-cC-----------cCCCchhHHHHHHHHHhccCC
Confidence 999999999999999963210 0 01000 00 00 013689999999999987666
Q ss_pred CcceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHH
Q 000284 1351 DNAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKA 1430 (1723)
Q Consensus 1351 ~~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~ 1430 (1723)
.+.+|+++||+|+|+++ ++.||+|+||+|++|||+||+||||||||||+|||+|+++|++|+|+++|+++.....+
T Consensus 1934 ~~~~L~v~nLsK~Y~~~----~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~~~~~ 2009 (2272)
T TIGR01257 1934 KTDILRLNELTKVYSGT----SSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNISD 2009 (2272)
T ss_pred CCceEEEEEEEEEECCC----CceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcchHHH
Confidence 67789999999999631 35699999999999999999999999999999999999999999999999999765556
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000284 1431 ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1510 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p 1510 (1723)
.+++||||||++.+++.+|++|||.++++++|+++++.+++++++++.++|.+++++++++|||||||||+||+||+++|
T Consensus 2010 ~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~v~~lLe~lgL~~~~dk~~~~LSGGqKqRLslA~ALi~~P 2089 (2272)
T TIGR01257 2010 VHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQSLGLSLYADRLAGTYSGGNKRKLSTAIALIGCP 2089 (2272)
T ss_pred HhhhEEEEeccccCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHhcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 78889999999999999999999999999999887777778889999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhcCCeEEE
Q 000284 1511 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLEL 1590 (1723)
Q Consensus 1511 ~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~~~~~~~~ 1590 (1723)
+||||||||+||||.+|+.+|+.|+++++ +| +|||+|||+|+|++++||||++|++|+++|.|+++++++++|.+|.+
T Consensus 2090 ~VLLLDEPTsGLDp~sr~~l~~lL~~l~~-~g-~TIILtTH~mee~e~lcDrV~IL~~G~i~~~Gs~q~Lk~~~g~g~~l 2167 (2272)
T TIGR01257 2090 PLVLLDEPTTGMDPQARRMLWNTIVSIIR-EG-RAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHLKSKFGDGYIV 2167 (2272)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHHh-CC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHHhCCceEE
Confidence 99999999999999999999999999864 44 68999999999999999999999999999999999999999999998
Q ss_pred EEeecCCCcc---cHHHHHHHHHhccccCCcchhhhhhhhhhhhccccccccCCCceeeechhHHHHHHHHhhhccccce
Q 000284 1591 EVKPTEVSSV---DLEDLCQIIQERVFDIPSQRRSLLDDLEVCIGGIDSISSENATAAEISLSQEMLLIVGRWLGNEERI 1667 (1723)
Q Consensus 1591 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1667 (1723)
+++.+..... +.+.+..++...+..... .+.. ...-.+...+. .+ .+.+..+.+ ...+..|
T Consensus 2168 ~i~~~~~~~~~~~~~~~v~~~i~~~fp~a~~-----~e~~----~~~l~~~i~~~-----~~-~~if~~L~~-~k~~l~I 2231 (2272)
T TIGR01257 2168 TMKIKSPKDDLLPDLNPVEQFFQGNFPGSVQ-----RERH----YNMLQFQVSSS-----SL-ARIFQLLIS-HKDSLLI 2231 (2272)
T ss_pred EEEEcCcchhhhhHHHHHHHHHhhcCcccee-----eccc----cceEEEEeCcc-----cH-HHHHHHHHh-cCCCCCe
Confidence 8876432211 122333344433221100 0000 00000111100 11 222222222 1235678
Q ss_pred eEeEecCCChhhHHHHhhcccccccCC
Q 000284 1668 KTLISSSSSPDRIFGEQLSEQLVRDGT 1694 (1723)
Q Consensus 1668 ~~~~~~~~sl~~vf~~~t~~~~~~~~~ 1694 (1723)
.++.+.++||||||+++++++-.+++.
T Consensus 2232 ~dysvsqtSLE~VFl~l~~~q~~~~~~ 2258 (2272)
T TIGR01257 2232 EEYSVTQTTLDQVFVNFAKQQTETYDL 2258 (2272)
T ss_pred EEEEcCCCCHHHHHHHHhccccccCCC
Confidence 999999999999999999998775533
No 2
>KOG0059 consensus Lipid exporter ABCA1 and related proteins, ABC superfamily [Lipid transport and metabolism; General function prediction only]
Probab=100.00 E-value=1.1e-86 Score=886.06 Aligned_cols=852 Identities=34% Similarity=0.515 Sum_probs=615.5
Q ss_pred HHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhhhCCcEEEEEEecCCChhhHHHHHHhhCCCceEEe
Q 000284 628 KKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGVGYTLTLVKSAPDASAAADIVYRHIPSALCVS 707 (1723)
Q Consensus 628 ~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~g~gy~l~~~~~~~~~~~~~~~~~~~~p~~~~~~ 707 (1723)
++.|++|||++ +|||++|++|+++ ++.+||+++|.||+++++. .....+.+++|++++..
T Consensus 2 ~~~k~~R~i~~-----------~Dri~i~s~g~l~---s~~~lk~~~g~gy~l~l~~------~~~~~~~~~~p~~~~~~ 61 (885)
T KOG0059|consen 2 ERRKEGRTIIL-----------GDRIVIMSHGKLK---SSLFLKRKLGSGYHLTLVL------QVTLFIQQHIPDARLVE 61 (885)
T ss_pred cccccCCEEEE-----------ecceeheeCCeec---cchHHHHhhCCCceEEeHH------HHHHHHHhhCccceecc
Confidence 45678999999 9999999999999 9999999999999999987 67788999999999887
Q ss_pred eeCcEEEEEecCCCcchHHHHHHHHHHhhhhccccccccccccccCCCeeEEEecCCCHHHHHHHHhcCCCcchhhhhhc
Q 000284 708 EVGTEITFKLPLASSSSFESMFREIESCIRKSVSKVEADATEDTDYLGIESFGISVTTLEEVFLRVAGCNLDESECISQR 787 (1723)
Q Consensus 708 ~~~~~~~~~lp~~~~~~~~~l~~~le~~~~~~~~~~~~~~~~~~~~~~i~~~~is~ttLEevfl~~~~~~~~~~~~~~~~ 787 (1723)
.. +..+.+|......+ .+..+ .++.+|+++.||+||||+++.+.......
T Consensus 62 ~~--~~~~~lp~~~~~~~--~~~~l---------------------~~~~~~~~~~t~l~~vfl~~~~~~~~~~~----- 111 (885)
T KOG0059|consen 62 CP--KLVYLLPLKYRREF--LFRGL---------------------DLIASFGVSLTTLEEVFLKLGGESDSLEN----- 111 (885)
T ss_pred cc--cccccCChhccccc--hhhhh---------------------hcccccccccccHHHHHhhcccccccccc-----
Confidence 77 88899998765443 11111 11788999999999999999864321110
Q ss_pred cccccccccccccCCCCccccccccccCCcccccceeeeeecchhhhhhHHhhhhhhhhcccccccccccchhHHHHHHH
Q 000284 788 NNLVTLDYVSAESDDQAPKRISNCKLFGNYKWVFGFIVTVVQRACTLIVAAVLGFLNFLIKKCCTCCIISRSMFWQHCKA 867 (1723)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~a 867 (1723)
+. .. .. ..+...+.+|+.+
T Consensus 112 -----------------~~-----~~---------------~~------------------------~~~~~~~~~~~~~ 130 (885)
T KOG0059|consen 112 -----------------DS-----TE---------------DQ------------------------VSGPAKAYTQFQA 130 (885)
T ss_pred -----------------cc-----cc---------------cc------------------------cchhHHhhhhHHH
Confidence 00 00 00 0245678899999
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhccCCCCCCccccccccCCcccCCCCCCCCcccccCchhhhhhhhh
Q 000284 868 LFIKRAVSARRDRKTIVFQLLIPAIFLLVGLLFLKLKPHPDMLSVTFTTSNFNPLLSGGGGGGPIPFDLSWPIANEVSKY 947 (1723)
Q Consensus 868 ll~KR~~~~~R~~~~~~~~lllP~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 947 (1723)
+++||++..+|+|+.++.++.+|.+++.+++... .+ ..++++..+...... ..++.|... .....
T Consensus 131 ~~~~~~~~~~r~~~~~~~~l~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~~--~~~~~~~~~------~~~~~ 195 (885)
T KOG0059|consen 131 LLRKRFLPLRRNWRLFLAQLLLPSIFVVLALVFS--DP-----HLTLSPSLYGALYTN--YSGEINTEE------FLSVL 195 (885)
T ss_pred HHHHhhhhhhhhhhhHHHHHhhHHHHHHHHHhcc--Cc-----cccCCccccceeeec--CCccCCccH------HHHhh
Confidence 9999999999999999999999999988887665 11 111111111000000 000111100 00000
Q ss_pred hccCcccccccCCCCCCChHHHHHHHHHhcCCCCccchhchhHHHHH---hhhh-cccccccEEEee----ccCCCCcee
Q 000284 948 IQGGWIQRFKQSSYRFPNAEKALADAVDAAGPTLGPVLLSMSEYLMS---SFNE-SYQSRYGAIVMD----DQNDDGSLG 1019 (1723)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~---~~~~-~~~~~~g~~~~~----~~~~~~~~~ 1019 (1723)
..... ..+...++.. ..+. .+...++....+ .........
T Consensus 196 ~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (885)
T KOG0059|consen 196 EANGK--------------------------------GRNLSLALNNINTEVDNFTVDNWTESSSKNKGDMLGRDLKDVR 243 (885)
T ss_pred hcccc--------------------------------cchhhhhhhcchhhheeeeecceeccccccchhhhcCccccce
Confidence 00000 0000000000 0000 000000011111 012223456
Q ss_pred EEEEeCCcCCChHHHHHHHHHHHHHHHhcCCCcceEEEEeecCCcchhhhhhhchhhhhHHHHHHHHHHHHhhhHhhhHH
Q 000284 1020 FTVLHNSSCQHAGPTFINVMNTAILRLATGNRNMTIRTRNHPLPTTQSQQLQRHDLDAFSVSIIISIAFSFIPASFAVAI 1099 (1723)
Q Consensus 1020 ~~~~~N~~~~hs~p~~ln~l~nailr~~~~~~~~~I~~~n~Plp~~~~~~~~~~~~~~~~~~i~i~~~~s~i~a~f~~~~ 1099 (1723)
..+|+|++.+|+.|..+|+.+|++++...... |.+.++|+|.+..+...... ..+..+.++.+.++++++.++++.
T Consensus 244 v~~~~n~k~~~~~~~~~~~~~n~l~~~~~~~~---i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l 319 (885)
T KOG0059|consen 244 VSVLFNNKGLHTLPFLLGLGSNALRRALNLSG---ISVLNEPMPLSGAQLSLDLL-ADLLGALFLLFVFLLLFSVFLLSL 319 (885)
T ss_pred EEEeeehhhhhhHHHhcchHHHHHHHhhcccc---ceeeecCcCccHhhhhhhhh-hHHHHHHHHHHHHHHHhHHHHhHH
Confidence 78999999999999999999999998875433 89999999987765432221 446677888999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchHHHHHHHHHHHHHHHHHHHHH
Q 000284 1100 VKEREVKAKQQQLISGVSVLSYWTSTYIWDFISFLFPSSCAIILFYIFGLDQFVGRGCLLPTVLIFLGYGLAIASSTYCL 1179 (1723)
Q Consensus 1100 V~ER~~k~k~lq~vsGv~~~~YW~s~~i~D~i~~li~~~~~iii~~~f~~~~~~~~~~~~~~~lllllyG~a~i~~~Yl~ 1179 (1723)
+.||..++||+|.++|+++.+||+++++||++.|++++++..+++.+|+ +........+++++++|+++.+|++|++
T Consensus 320 i~e~~~~~~~~~~i~G~~~~~yw~~~~~~d~~~~~l~~~~~~~~~~~f~---~~~~~~~~~~~~~~~l~~~s~i~l~y~~ 396 (885)
T KOG0059|consen 320 ILERQQRLRHQQLIAGLSPSTYWLFALVWDLLLYLLILLILLIFVLIFG---FFAGNNTVIILLLLLLYIRSAIPLTYIL 396 (885)
T ss_pred HHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhheee---cccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988 6667778889999999999999999999
Q ss_pred hhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhhcc-chhhhhhhHHHHHHHh-hcccC--
Q 000284 1180 TFFFSDHTMAQNVVLLVHFFTGLILMVISFIMGLLEA---TRSANSLLKNFFRLS-PGFCFADGLASLALLR-QGMKD-- 1252 (1723)
Q Consensus 1180 Sf~F~~~~~a~~~~~~~~~~~g~~~~i~~~il~~~~~---~~~~~~~l~~~f~l~-P~~~l~~gl~~l~~~~-~~~~~-- 1252 (1723)
|+.|+...++.....+.++++|+...++.+++..... .......+...|.++ |.++++.+........ .++..
T Consensus 397 s~~f~~~~~~~v~~~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 476 (885)
T KOG0059|consen 397 SFIFSKESTASVILSIYNLISGLLVFFAVFILQSFANGRTGDIFSMILVPGFTLFLPLYELSSLAAEGNLNLNDGMSLEV 476 (885)
T ss_pred HHHhcCCcCceeehhhHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcchhhhhhhh
Confidence 9999999999999999999888866555555443322 122334455556655 8888888877765331 11110
Q ss_pred ----CC-CCCcccccc--chhhHHHHHHHHHHHHHHHHHHHhccccchhhhHHhhhhccccccccCCCCCCCcccccCCC
Q 000284 1253 ----KT-SDGVFDWNV--TSASICYLGCESICYFLLTLGLELLPSHKWTLMTIKEWWKGTRHRLCNTPSSYLEPLLQSSS 1325 (1723)
Q Consensus 1253 ----~~-~~~~~~~~~--~g~~i~~l~~~~i~~~ll~l~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1325 (1723)
.. ....+.|.. .+....++..+++.++++.+.++... .+..... .+...
T Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~~~~~-------------~~~~~~~-------~~~~~---- 532 (885)
T KOG0059|consen 477 LGNDESFYTLLLEWLLPLIGRRYLALVTEGVKDDLFFLLIFVPF-------------KRRMRAL-------TQNML---- 532 (885)
T ss_pred hcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-------------ccccccc-------ccccc----
Confidence 01 111344655 34445666666666665555443210 0000000 00000
Q ss_pred CCCcCCCCcchhhHHHhhhcccCCCC---cceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHH
Q 000284 1326 ESDTLDLNEDIDVQVERNRVLSGSVD---NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTT 1402 (1723)
Q Consensus 1326 ~~~~~~~~eD~dV~~Er~rv~~~~~~---~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTl 1402 (1723)
........||.||.+||+++...... ...+.++||+|.|+... . |++++||.|++|||+|++|+|||||||+
T Consensus 533 ~~~~~~~~e~~~v~~e~~~v~~~~~~~~~~~~~~~~~L~k~y~~~~----~-Av~~ls~~V~~gecfgLLG~NGAGKtT~ 607 (885)
T KOG0059|consen 533 KGFEPVEVEKLDVARERNRVETLLFRSSYSSALVLNNLSKVYGGKD----G-AVRGLSFAVPPGECFGLLGVNGAGKTTT 607 (885)
T ss_pred CCCcCcchhhHHHHHHHHhhhhhhhcccccceEEEcceeeeecchh----h-hhcceEEEecCCceEEEecCCCCCchhh
Confidence 00011236789999999888654332 36899999999997521 2 9999999999999999999999999999
Q ss_pred HHHHhCCCCCCceEEEEcCeeCCCC--hHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcC
Q 000284 1403 LSMISGEEYPTDGTAFIFGKDIRSD--PKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFD 1480 (1723)
Q Consensus 1403 l~~l~G~~~p~~G~i~i~G~~i~~~--~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~ 1480 (1723)
++||+|+.+|++|+++++|+++... ..+.++.||||||++++++.+|+||||.+|++++|+++.++++.++++++.++
T Consensus 608 f~mltG~~~~t~G~a~i~g~~i~~~~~~~~~~~~iGyCPQ~d~l~~~lT~rEhL~~~arlrG~~~~di~~~v~~ll~~~~ 687 (885)
T KOG0059|consen 608 FKMLTGETKPTSGEALIKGHDITVSTDFQQVRKQLGYCPQFDALWEELTGREHLEFYARLRGLPRSDIGSAIEKLLRLVG 687 (885)
T ss_pred HHHHhCCccCCcceEEEecCccccccchhhhhhhcccCCchhhhhhhccHHHHHHHHHHHcCCChhHHHHHHHHHHHHcC
Confidence 9999999999999999999999874 34589999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHc
Q 000284 1481 LLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALC 1560 (1723)
Q Consensus 1481 l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~ 1560 (1723)
|.++++++++.|||||||||++|.|++++|++++|||||+||||.+||.+|++|++++ ++|+ +||+|||+|||||++|
T Consensus 688 L~~~~~~~~~~ySgG~kRkLs~aialig~p~vi~LDEPstGmDP~arr~lW~ii~~~~-k~g~-aiiLTSHsMeE~EaLC 765 (885)
T KOG0059|consen 688 LGPYANKQVRTYSGGNKRRLSFAIALIGDPSVILLDEPSTGLDPKARRHLWDIIARLR-KNGK-AIILTSHSMEEAEALC 765 (885)
T ss_pred ChhhhccchhhCCCcchhhHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHH-hcCC-EEEEEcCCHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999986 4554 8999999999999999
Q ss_pred CEEEEEECCEEEEecChhHHHhhcCCeEEEEEeecCCCcccHHHHHHHHHhccccCCcchhhhhhhhhhhhccccccccC
Q 000284 1561 TRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVKPTEVSSVDLEDLCQIIQERVFDIPSQRRSLLDDLEVCIGGIDSISSE 1640 (1723)
Q Consensus 1561 drv~im~~G~l~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1640 (1723)
||++||.+|+++|.|++||||++||.+|.++++.++..+. +.+.+.+++.+..-....+. . ..-.+...
T Consensus 766 tR~aImv~G~l~ciGs~q~LKsrfG~gy~l~~~~~~~~~~--~~v~~~~~~~~p~a~~~~~~-----~----~~~~~~ip 834 (885)
T KOG0059|consen 766 TRTAIMVIGQLRCIGSPQELKSRYGSGYTLTVRIKELPEV--SEVEKLLQNRFPGAVLKERH-----A----GLLAFEIP 834 (885)
T ss_pred hhhheeecCeeEEecChHHHHhhcCCcEEEEEEECCCccc--chHHHHHHHhCCCcchhhhh-----h----ceEEEEcc
Confidence 9999999999999999999999999999999988753332 45555566554433211110 0 00001111
Q ss_pred CCceeeechhHHHHHHHHhhhccccceeEeEecCCChhhHHHHhhccccc
Q 000284 1641 NATAAEISLSQEMLLIVGRWLGNEERIKTLISSSSSPDRIFGEQLSEQLV 1690 (1723)
Q Consensus 1641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~vf~~~t~~~~~ 1690 (1723)
.. +.......+..+... ...-++.+....+.+|||||++...++-.
T Consensus 835 ~~---~~~~~~~vF~~le~~-~~~~~i~dyslsq~tLe~VFi~~a~~q~~ 880 (885)
T KOG0059|consen 835 KD---EVVSLSEVFLALEKA-KESFGIEDYSLSQTTLEDVFLILAKTQED 880 (885)
T ss_pred cc---hhhHHHHHHHHHHHH-HHhcCHHHHHHHHhhHHHHHHHHhccccc
Confidence 00 000001222222222 24557888999999999999999876544
No 3
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.2e-78 Score=776.32 Aligned_cols=224 Identities=28% Similarity=0.453 Sum_probs=196.1
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhc
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRK 526 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~ 526 (1723)
..|+++||+++|++++ +..+|+|+||+|++||.++|+|||||||||++++|.+++.|++|+|+|+|.|++. +.+++|.
T Consensus 349 g~ief~nV~FsYPsRp-dv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~ 427 (1228)
T KOG0055|consen 349 GEIEFRNVCFSYPSRP-DVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRS 427 (1228)
T ss_pred cceEEEEEEecCCCCC-cchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHh
Confidence 4699999999999875 5789999999999999999999999999999999999999999999999999975 8889999
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-------CCccccc----ccCCCChhHHHHHHH
Q 000284 527 GLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVG-------LADKVNI----VVRALSGGMKRKLSL 595 (1723)
Q Consensus 527 ~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~-------l~~~~~~----~~~~LSgGqkqrl~l 595 (1723)
+||+|.|+|+||. .|++||+.++ .+. .-+++++++.+..+ |++..+. +.-+||||||||++|
T Consensus 428 ~iglV~QePvlF~-~tI~eNI~~G-----~~d-at~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g~qLSGGQKQRIAI 500 (1228)
T KOG0055|consen 428 QIGLVSQEPVLFA-TTIRENIRYG-----KPD-ATREEIEEAAKAANAHDFILKLPDGYDTLVGERGVQLSGGQKQRIAI 500 (1228)
T ss_pred hcCeeeechhhhc-ccHHHHHhcC-----CCc-ccHHHHHHHHHHccHHHHHHhhHHhhcccccCCCCCCChHHHHHHHH
Confidence 9999999999996 5999999984 221 22334444444332 3333333 334699999999999
Q ss_pred HHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhhhC
Q 000284 596 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYG 675 (1723)
Q Consensus 596 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~g 675 (1723)
||||+.+|+|||||||||+||+.+++.+.++|++.++|||.|+++|++.++.. ||+|++|++|++++.|++++|-+.-|
T Consensus 501 ARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHRLStIrn-aD~I~v~~~G~IvE~G~h~ELi~~~G 579 (1228)
T KOG0055|consen 501 ARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAHRLSTIRN-ADKIAVMEEGKIVEQGTHDELIALGG 579 (1228)
T ss_pred HHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeeehhhhhc-cCEEEEEECCEEEEecCHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999988 99999999999999999999988776
Q ss_pred CcEEE
Q 000284 676 VGYTL 680 (1723)
Q Consensus 676 ~gy~l 680 (1723)
..+.+
T Consensus 580 ~Y~~l 584 (1228)
T KOG0055|consen 580 IYSSL 584 (1228)
T ss_pred hHHHH
Confidence 65543
No 4
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=7.3e-76 Score=811.89 Aligned_cols=832 Identities=19% Similarity=0.227 Sum_probs=508.6
Q ss_pred CccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCC----CCCcceEEEccccCCccHHHHhcceEEEccCCCCCC
Q 000284 464 GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLI----PPTTGDALVFGKNITADMDEIRKGLGVCPQYDILFP 539 (1723)
Q Consensus 464 ~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~----~p~~G~i~i~g~~i~~~~~~~r~~ig~~~Q~~~l~~ 539 (1723)
..+.+|+|+|+.+++||+++|+||||||||||+|+|+|+. +|++|+|.++|.++.......|+.+||++|++.+++
T Consensus 72 ~~~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~ 151 (1394)
T TIGR00956 72 KTFDILKPMDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFP 151 (1394)
T ss_pred CcceeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCC
Confidence 3467999999999999999999999999999999999996 579999999999875333345677999999999999
Q ss_pred CCCHHHHHHHHHHhcC-------CCHHHHHHH-HHHHHHHcCCCccccccc-----CCCChhHHHHHHHHHHHhcCCcEe
Q 000284 540 ELTVREHLEMFAVLKG-------VKEELLESV-VAEMVDEVGLADKVNIVV-----RALSGGMKRKLSLGIALIGDSKVV 606 (1723)
Q Consensus 540 ~lTv~e~l~~~~~~~g-------~~~~~~~~~-v~~~l~~~~l~~~~~~~~-----~~LSgGqkqrl~lA~al~~~p~vl 606 (1723)
.+||+|+|.|.+.++. .++++..++ ++++++.+||.+..|+++ +.|||||||||+||+||+.+|+|+
T Consensus 152 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~aL~~~p~vl 231 (1394)
T TIGR00956 152 HLTVGETLDFAARCKTPQNRPDGVSREEYAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAEASLGGAKIQ 231 (1394)
T ss_pred CCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHHHHHhCCCEE
Confidence 9999999999877652 334443333 467899999998777654 679999999999999999999999
Q ss_pred eccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCH-HHHHhhcCEEEEEeCCEEEEecCHHHHHhhhC-CcEEEEE
Q 000284 607 ILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSM-DEAEELGDRIAIMANGSLKCCGSSLFLKHQYG-VGYTLTL 682 (1723)
Q Consensus 607 iLDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~-~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~g-~gy~l~~ 682 (1723)
+|||||+|||+.++..+.+.|+++. .|+|||+++|+. +++..++|||++|++|+++..|++.+++..|. .||. +
T Consensus 232 llDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~~~~~~~yF~~lG~~--~ 309 (1394)
T TIGR00956 232 CWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGPADKAKQYFEKMGFK--C 309 (1394)
T ss_pred EEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECCHHHHHHHHHHcCCC--C
Confidence 9999999999999999999999985 389999999996 78999999999999999999999998876653 3442 1
Q ss_pred EecCCChhhHHHHHHhhC-CCceEEeeeCcEEEEEecCCCcchHHHHHHHHHHhhhhccccccccccccccCCCeeEEE-
Q 000284 683 VKSAPDASAAADIVYRHI-PSALCVSEVGTEITFKLPLASSSSFESMFREIESCIRKSVSKVEADATEDTDYLGIESFG- 760 (1723)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~lp~~~~~~~~~l~~~le~~~~~~~~~~~~~~~~~~~~~~i~~~~- 760 (1723)
+......+++..-. |..... ..+.+. ..|.. ...+.+.+++-+...+ .. ++ +..+.
T Consensus 310 ----p~~~n~aDfl~~~~~~~~~~~-~~~~e~--~~~~~-~~~~~~~~~~s~~~~~-----~~-------~~--~~~~~~ 367 (1394)
T TIGR00956 310 ----PDRQTTADFLTSLTSPAERQI-KPGYEK--KVPRT-PQEFETYWRNSPEYAQ-----LM-------KE--IDEYLD 367 (1394)
T ss_pred ----CCCCChHHHHHhccChhhhhc-cccccc--cCCCC-HHHHHHHHHcCHHHHH-----HH-------HH--HHHHhh
Confidence 11111222222211 100000 000000 01110 1112111111000000 00 00 00000
Q ss_pred -ecCCCHHHHHHHHhcCCCcchhhhhhccccccccccccccCCCCccccccccccCCcccccceeeeeecchhhhhhHHh
Q 000284 761 -ISVTTLEEVFLRVAGCNLDESECISQRNNLVTLDYVSAESDDQAPKRISNCKLFGNYKWVFGFIVTVVQRACTLIVAAV 839 (1723)
Q Consensus 761 -is~ttLEevfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 839 (1723)
.....-.+.+... . ...+ + +..
T Consensus 368 ~~~~~~~~~~~~~~--------------~-----------~~~~-~-~~~------------------------------ 390 (1394)
T TIGR00956 368 RCSESDTKEAYRES--------------H-----------VAKQ-S-KRT------------------------------ 390 (1394)
T ss_pred hccchhhHHHHHHH--------------H-----------Hhhh-c-ccc------------------------------
Confidence 0000000000000 0 0000 0 000
Q ss_pred hhhhhhhcccccccccccchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH-HHHHHHHHhccCCCCCCcccccccc
Q 000284 840 LGFLNFLIKKCCTCCIISRSMFWQHCKALFIKRAVSARRDRKTIVFQLLIPAIF-LLVGLLFLKLKPHPDMLSVTFTTSN 918 (1723)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~~~~~q~~all~KR~~~~~R~~~~~~~~lllP~~~-~~~~l~~~~~~~~~~~~~~~l~~~~ 918 (1723)
.....-...+++|++.++++.+...+||+..+...++..+++ +++|.++...... +
T Consensus 391 ------------~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~--~--------- 447 (1394)
T TIGR00956 391 ------------RPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKN--T--------- 447 (1394)
T ss_pred ------------cCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCC--c---------
Confidence 000012245899999999999999999999998877765443 2333333211000 0
Q ss_pred CCcccCCCCCCCCcccccCchhhhhhhhhhccCcccccccCCCCCCChHHHHHHHHHhcCCCCccchhchhHHHHHhhhh
Q 000284 919 FNPLLSGGGGGGPIPFDLSWPIANEVSKYIQGGWIQRFKQSSYRFPNAEKALADAVDAAGPTLGPVLLSMSEYLMSSFNE 998 (1723)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 998 (1723)
..+
T Consensus 448 -------------------------------------------------~~~---------------------------- 450 (1394)
T TIGR00956 448 -------------------------------------------------SDF---------------------------- 450 (1394)
T ss_pred -------------------------------------------------hhH----------------------------
Confidence 000
Q ss_pred cccccccEEEeeccCCCCceeEEEEeCCcCCChHHHHHHHHHHHHHHHhcCCCcceEEEEeecCCcchhhhhhhchhhhh
Q 000284 999 SYQSRYGAIVMDDQNDDGSLGFTVLHNSSCQHAGPTFINVMNTAILRLATGNRNMTIRTRNHPLPTTQSQQLQRHDLDAF 1078 (1723)
Q Consensus 999 ~~~~~~g~~~~~~~~~~~~~~~~~~~N~~~~hs~p~~ln~l~nailr~~~~~~~~~I~~~n~Plp~~~~~~~~~~~~~~~ 1078 (1723)
.. + ...+
T Consensus 451 --~~---------------------------------------------------------------------r--~g~l 457 (1394)
T TIGR00956 451 --YS---------------------------------------------------------------------R--GGAL 457 (1394)
T ss_pred --HH---------------------------------------------------------------------H--HHHH
Confidence 00 0 0000
Q ss_pred HHHHHHHHHHHHhhhHhhhHHHHHHHHHHHHHHHHhCC-chHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcccccccc
Q 000284 1079 SVSIIISIAFSFIPASFAVAIVKEREVKAKQQQLISGV-SVLSYWTSTYIWDFISFLFPSSCAIILF-YIFGLDQFVGRG 1156 (1723)
Q Consensus 1079 ~~~i~i~~~~s~i~a~f~~~~V~ER~~k~k~lq~vsGv-~~~~YW~s~~i~D~i~~li~~~~~iii~-~~f~~~~~~~~~ 1156 (1723)
..++. ..++....-+.....||..-.|| .-+|. ++.+|.+|..+.|+...++.+++..++. +..++. .+.+
T Consensus 458 f~~~~---~~~~~~~~~i~~~~~eR~i~~re--~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~--~~~~ 530 (1394)
T TIGR00956 458 FFAIL---FNAFSSLLEIASMYEARPIVEKH--RKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFR--RTAG 530 (1394)
T ss_pred HHHHH---HHHHHHHHHHHHHHhcCcceeee--ccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCc--ccHH
Confidence 00000 01111111112223455444332 23454 7899999999999987665554444433 333332 1233
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 000284 1157 CLLPTVLIFLGYGLAIASSTYCLTFFFSDHTMAQNVVLLV----HFFTGLILMVISFIMGLLEATRSANSLLKNFFRLSP 1232 (1723)
Q Consensus 1157 ~~~~~~lllllyG~a~i~~~Yl~Sf~F~~~~~a~~~~~~~----~~~~g~~~~i~~~il~~~~~~~~~~~~l~~~f~l~P 1232 (1723)
.++..++++++..+++..+..+++.++.+...|.....++ .++.|+ +-........++|+..+.|
T Consensus 531 ~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf-----------~i~~~~mp~~~~W~~yisp 599 (1394)
T TIGR00956 531 RFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGF-----------AIPRPSMLGWSKWIYYVNP 599 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHccc-----------ccChhhccHHHHHHHHcCH
Confidence 4455555555666666667777777777766554332221 112221 1111223334455555555
Q ss_pred hhhhhhhHHHHHHHhhc--cc-----------------CC----------CCC--------CccccccchhhHHHHHHHH
Q 000284 1233 GFCFADGLASLALLRQG--MK-----------------DK----------TSD--------GVFDWNVTSASICYLGCES 1275 (1723)
Q Consensus 1233 ~~~l~~gl~~l~~~~~~--~~-----------------~~----------~~~--------~~~~~~~~g~~i~~l~~~~ 1275 (1723)
..--..+++.-...... +. .+ ... -.+.++..+.++.++++-.
T Consensus 600 ~~yafeal~~nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~~~~~~~~~~w~n~gil~~~~ 679 (1394)
T TIGR00956 600 LAYAFESLMVNEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKLSFQYYNSHKWRNFGIIIGFT 679 (1394)
T ss_pred HHHHHHHHHHhhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHhcCCcccchhhHHHHHHHHHH
Confidence 32222222221110000 00 00 000 0112233445555666555
Q ss_pred HHHHHHHH-HHHhccccchhhhHHhhhhccccccccCCCCCCCcccccCCCCCCc---CC-CCcchhhHHHhhhcccCCC
Q 000284 1276 ICYFLLTL-GLELLPSHKWTLMTIKEWWKGTRHRLCNTPSSYLEPLLQSSSESDT---LD-LNEDIDVQVERNRVLSGSV 1350 (1723)
Q Consensus 1276 i~~~ll~l-~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~eD~dV~~Er~rv~~~~~ 1350 (1723)
++|.++.+ .+++....... ..... +++.............+....+..+... .+ ..|..++. +..+... ..
T Consensus 680 v~f~~~~~l~l~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~-~~~~~~~-~~ 755 (1394)
T TIGR00956 680 VFFFFVYILLTEFNKGAKQK-GEILV-FRRGSLKRAKKAGETSASNKNDIEAGEVLGSTDLTDESDDVN-DEKDMEK-ES 755 (1394)
T ss_pred HHHHHHHHHHHHhccccCCC-CceEe-eccccccchhhcccccccccccccccccCCCCcccccccccc-ccccccc-cC
Confidence 55555443 34442110000 00000 0000000000000000000000000000 00 00000100 0000000 01
Q ss_pred CcceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC---CCceEEEEcCeeCCCC
Q 000284 1351 DNAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY---PTDGTAFIFGKDIRSD 1427 (1723)
Q Consensus 1351 ~~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~---p~~G~i~i~G~~i~~~ 1427 (1723)
+..+++++||++.|+.++ +++.+|+|||+++++||++||+||||||||||+++|+|+.+ |++|+|.++|+++..
T Consensus 756 ~~~~l~~~nl~~~~~~~~--~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~- 832 (1394)
T TIGR00956 756 GEDIFHWRNLTYEVKIKK--EKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS- 832 (1394)
T ss_pred CCceEEEEeeEEEecCCC--CCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh-
Confidence 234689999999996321 34679999999999999999999999999999999999997 789999999999842
Q ss_pred hHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcC---CChhhHHHHHHHHHHHcCCccccCCCCC----CCChhHHHHH
Q 000284 1428 PKAARRLIGYCPQFDALLEYLTVQEHLELYARIKG---VAEYRMDDVVMEKLVEFDLLKHAKKPSF----TLSGGNKRKL 1500 (1723)
Q Consensus 1428 ~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g---~~~~~~~~~~~~~l~~~~l~~~~~~~~~----~LSgG~kqrl 1500 (1723)
..|+.+|||||++.+++.+||+|||.+.+.++. .++++..++++++++.++|.+.+|+.++ .|||||||||
T Consensus 833 --~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~~LSgGqrqRl 910 (1394)
T TIGR00956 833 --SFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPGEGLNVEQRKRL 910 (1394)
T ss_pred --hhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCCCCCCHHHhhHH
Confidence 467889999999988899999999999887653 3444556778999999999988898887 7999999999
Q ss_pred HHHHHHhcCCC-EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHH-HHHHcCEEEEEECC-EEEEecCh
Q 000284 1501 SVAIAMIGDPP-IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNE-AQALCTRIGIMVGG-QLRCIGSP 1577 (1723)
Q Consensus 1501 ~iA~al~~~p~-vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e-~~~l~drv~im~~G-~l~~~g~~ 1577 (1723)
+||+||+.+|+ ||+|||||+|||+.++..+++.|+++++ +| +|||+|||+++. +.+.|||+++|++| ++++.|++
T Consensus 911 ~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~-~g-~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~ 988 (1394)
T TIGR00956 911 TIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLAD-HG-QAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDL 988 (1394)
T ss_pred HHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHH-cC-CEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCc
Confidence 99999999997 9999999999999999999999999964 45 589999999986 45679999999997 99999987
Q ss_pred h
Q 000284 1578 Q 1578 (1723)
Q Consensus 1578 ~ 1578 (1723)
.
T Consensus 989 ~ 989 (1394)
T TIGR00956 989 G 989 (1394)
T ss_pred c
Confidence 3
No 5
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=4.5e-77 Score=722.93 Aligned_cols=225 Identities=27% Similarity=0.467 Sum_probs=201.1
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCC----cceEEEccccCCc----
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPT----TGDALVFGKNITA---- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~----~G~i~i~g~~i~~---- 519 (1723)
..++++||++.|....+...||+|+||++.+||++||+|.+||||||+.+.|.|++++. +|+|.++|.|+..
T Consensus 4 ~lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~ 83 (539)
T COG1123 4 PLLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSER 83 (539)
T ss_pred ceEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHH
Confidence 37999999999987655567999999999999999999999999999999999999987 8999999998743
Q ss_pred cHHHHh-cceEEEccCC--CCCCCCCHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHcCCCcccc--cccCCCChhHHHHH
Q 000284 520 DMDEIR-KGLGVCPQYD--ILFPELTVREHLEMFAVLKG-VKEELLESVVAEMVDEVGLADKVN--IVVRALSGGMKRKL 593 (1723)
Q Consensus 520 ~~~~~r-~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~g-~~~~~~~~~v~~~l~~~~l~~~~~--~~~~~LSgGqkqrl 593 (1723)
.+..+| +.|+|+||++ .|.|-+|+.+.+.-...+++ .+++++++++.++|+.+||++... +++++||||||||+
T Consensus 84 ~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~~~yPheLSGG~rQRv 163 (539)
T COG1123 84 EMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERRDRYPHQLSGGMRQRV 163 (539)
T ss_pred HHHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhhccCCcccCchHHHHH
Confidence 344555 7799999997 46777999999976665554 558889999999999999997655 49999999999999
Q ss_pred HHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 594 SLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 594 ~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
.||+||+.+|++||+||||++||+..+.++.++|++++ .|.++|+||||+..+..+||||+||.+|++++.|+++++.
T Consensus 164 ~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~G~~~~i~ 243 (539)
T COG1123 164 MIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVETGPTEEIL 243 (539)
T ss_pred HHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEecCHHHHH
Confidence 99999999999999999999999999999999999986 4999999999999999999999999999999998865544
Q ss_pred h
Q 000284 672 H 672 (1723)
Q Consensus 672 ~ 672 (1723)
+
T Consensus 244 ~ 244 (539)
T COG1123 244 S 244 (539)
T ss_pred h
Confidence 3
No 6
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-76 Score=763.60 Aligned_cols=229 Identities=25% Similarity=0.351 Sum_probs=199.2
Q ss_pred ceEEEEeEEEEcCCCCc-----cCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC
Q 000284 1353 AIIYLRNLRKVYPGGKR-----SDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD 1427 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~-----~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~ 1427 (1723)
++|+++||+|.|+.... .+.+.+|+|+||+|++||++||+|+||||||||+|+|+|+++|++|+|+++|.++...
T Consensus 312 ~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~ 391 (623)
T PRK10261 312 PILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTL 391 (623)
T ss_pred ceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEEECCEECCcC
Confidence 47999999999963100 0124699999999999999999999999999999999999999999999999988642
Q ss_pred -h---HHhccceEEEecCC--CCCCCCCHHHHHHHHHHHcCC-ChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHH
Q 000284 1428 -P---KAARRLIGYCPQFD--ALLEYLTVQEHLELYARIKGV-AEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRK 1499 (1723)
Q Consensus 1428 -~---~~~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~kqr 1499 (1723)
. ...+++|||+||++ .+++.+||.||+.+....++. ...+..+++.++|+.+||. +..++++++||||||||
T Consensus 392 ~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~~LSgGqrQR 471 (623)
T PRK10261 392 SPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQR 471 (623)
T ss_pred CHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHH
Confidence 1 23467899999996 588899999999876555554 2334556788999999996 67899999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000284 1500 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1579 (1723)
Q Consensus 1500 l~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~ 1579 (1723)
|+|||||+.+|++|||||||+|||+.+++.++++|++++++.| .|||++|||++++..+||||++|++|++++.|++++
T Consensus 472 v~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g-~tvi~isHdl~~v~~~~dri~vl~~G~iv~~g~~~~ 550 (623)
T PRK10261 472 ICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFG-IAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRA 550 (623)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHH
Confidence 9999999999999999999999999999999999999965444 689999999999999999999999999999999999
Q ss_pred HHh
Q 000284 1580 LKT 1582 (1723)
Q Consensus 1580 l~~ 1582 (1723)
+..
T Consensus 551 i~~ 553 (623)
T PRK10261 551 VFE 553 (623)
T ss_pred Hhc
Confidence 864
No 7
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=8.8e-75 Score=741.41 Aligned_cols=227 Identities=30% Similarity=0.414 Sum_probs=193.2
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEc-Cee---CCCC--
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIF-GKD---IRSD-- 1427 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~-G~~---i~~~-- 1427 (1723)
+|+++||+|+|++.. .+.+.+++|+||+|++||++||+||||||||||+|+|+|+++|++|+|+++ |.+ +...
T Consensus 279 ~l~~~~l~~~~~~~~-~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~ 357 (520)
T TIGR03269 279 IIKVRNVSKRYISVD-RGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGP 357 (520)
T ss_pred eEEEeccEEEeccCC-CCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccch
Confidence 688999999995310 023469999999999999999999999999999999999999999999996 643 2211
Q ss_pred --hHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCcc-----ccCCCCCCCChhHHHHH
Q 000284 1428 --PKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLK-----HAKKPSFTLSGGNKRKL 1500 (1723)
Q Consensus 1428 --~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~-----~~~~~~~~LSgG~kqrl 1500 (1723)
....+++|||+||++.+++.+||+||+.+.... +.+....++++.++++.++|.+ ..++++.+|||||||||
T Consensus 358 ~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LSgGq~qrv 436 (520)
T TIGR03269 358 DGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGL-ELPDELARMKAVITLKMVGFDEEKAEEILDKYPDELSEGERHRV 436 (520)
T ss_pred hhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHc-CCCHHHHHHHHHHHHHhCCCCCccchhhhhCChhhCCHHHHHHH
Confidence 123456799999999899999999999875433 3333334456788999999964 57899999999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000284 1501 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1580 (1723)
Q Consensus 1501 ~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l 1580 (1723)
+|||||+.+|++|||||||+|||+.+++.+++.|++++++.| .|||++|||++++..+|||+++|++|++++.|+++++
T Consensus 437 ~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g-~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 515 (520)
T TIGR03269 437 ALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEME-QTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEEI 515 (520)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcC-cEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999999999999864444 6899999999999999999999999999999999887
Q ss_pred Hhh
Q 000284 1581 KTR 1583 (1723)
Q Consensus 1581 ~~~ 1583 (1723)
.++
T Consensus 516 ~~~ 518 (520)
T TIGR03269 516 VEE 518 (520)
T ss_pred Hhh
Confidence 654
No 8
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-75 Score=740.98 Aligned_cols=214 Identities=23% Similarity=0.405 Sum_probs=191.4
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCC--CcceEEEccccCCcc-H-HH
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP--TTGDALVFGKNITAD-M-DE 523 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p--~~G~i~i~g~~i~~~-~-~~ 523 (1723)
..|+++||+|.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.++... . ..
T Consensus 4 ~~l~~~nl~~~~~~----~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~ 79 (506)
T PRK13549 4 YLLEMKNITKTFGG----VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDT 79 (506)
T ss_pred ceEEEeeeEEEeCC----eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHH
Confidence 46999999999953 4699999999999999999999999999999999999996 899999999988542 2 23
Q ss_pred HhcceEEEccCCCCCCCCCHHHHHHHHHHhc--C-CCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHh
Q 000284 524 IRKGLGVCPQYDILFPELTVREHLEMFAVLK--G-VKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALI 600 (1723)
Q Consensus 524 ~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~--g-~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~ 600 (1723)
.|+.+||+||++.+++.+||+||+.+..... + .+.++.+++++++++.+|+.+..++++++||||||||++|||||+
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~ 159 (506)
T PRK13549 80 ERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPVGNLGLGQQQLVEIAKALN 159 (506)
T ss_pred HHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccchhhCCHHHHHHHHHHHHHh
Confidence 4678999999999999999999998865432 2 244455678899999999998889999999999999999999999
Q ss_pred cCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEec
Q 000284 601 GDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 665 (1723)
Q Consensus 601 ~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~G 665 (1723)
.+|++|||||||+|||+.++++++++|++++ +|+|||++||+++++..+||||++|++|+++..|
T Consensus 160 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~ 225 (506)
T PRK13549 160 KQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTR 225 (506)
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeec
Confidence 9999999999999999999999999999985 5899999999999999999999999999987544
No 9
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=4.6e-74 Score=735.74 Aligned_cols=227 Identities=22% Similarity=0.393 Sum_probs=193.5
Q ss_pred eEEEEeEEEEcCCCCc-----cCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-
Q 000284 1354 IIYLRNLRKVYPGGKR-----SDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD- 1427 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~-----~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~- 1427 (1723)
+|+++|+++.|+.+.. .+.+.+++++||+|++||++||+||||||||||+|+|+|++ |++|+|+++|+++...
T Consensus 275 ~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~-~~~G~i~~~g~~i~~~~ 353 (529)
T PRK15134 275 LLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLI-NSQGEIWFDGQPLHNLN 353 (529)
T ss_pred cccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcC-CCCcEEEECCEEccccc
Confidence 5778889998852100 01356999999999999999999999999999999999998 4999999999988542
Q ss_pred hH---HhccceEEEecCC--CCCCCCCHHHHHHHHHHHcC--CChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHH
Q 000284 1428 PK---AARRLIGYCPQFD--ALLEYLTVQEHLELYARIKG--VAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRK 1499 (1723)
Q Consensus 1428 ~~---~~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g--~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~kqr 1499 (1723)
.. ..++++||+||++ .+++.+||+||+.+....++ .+..+.++++.++++.+++. +..++++.+||||||||
T Consensus 354 ~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qr 433 (529)
T PRK15134 354 RRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMEEVGLDPETRHRYPAEFSGGQRQR 433 (529)
T ss_pred hhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHHHHHHHHHHHHcCCCHHHHhcCCccCCHHHHHH
Confidence 21 2356799999996 47888999999987654332 34444456788999999997 56899999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000284 1500 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1579 (1723)
Q Consensus 1500 l~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~ 1579 (1723)
|+|||||+.+|++|||||||+|||+.+++.++++|++++++.| +|||++|||++++..+|||+++|++|++++.|++++
T Consensus 434 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~ 512 (529)
T PRK15134 434 IAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQ-LAYLFISHDLHVVRALCHQVIVLRQGEVVEQGDCER 512 (529)
T ss_pred HHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhC-CEEEEEeCCHHHHHHhcCeEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999999999999999965434 589999999999999999999999999999999988
Q ss_pred HHh
Q 000284 1580 LKT 1582 (1723)
Q Consensus 1580 l~~ 1582 (1723)
+.+
T Consensus 513 ~~~ 515 (529)
T PRK15134 513 VFA 515 (529)
T ss_pred Hhc
Confidence 754
No 10
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2.3e-72 Score=772.44 Aligned_cols=825 Identities=20% Similarity=0.246 Sum_probs=500.4
Q ss_pred ccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCC---cceEEEccccCCccHHHHhcceEEEccCCCCCCCC
Q 000284 465 NCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPT---TGDALVFGKNITADMDEIRKGLGVCPQYDILFPEL 541 (1723)
Q Consensus 465 ~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~---~G~i~i~g~~i~~~~~~~r~~ig~~~Q~~~l~~~l 541 (1723)
++.+|+|+|+.+++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++... ..|+.+|||+|++.+++.+
T Consensus 177 ~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~--~~~~~i~yv~Q~d~~~~~l 254 (1470)
T PLN03140 177 KLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEF--VPRKTSAYISQNDVHVGVM 254 (1470)
T ss_pred cceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhh--cccceeEEecccccCCCcC
Confidence 356999999999999999999999999999999999999998 99999999987432 1267899999999999999
Q ss_pred CHHHHHHHHHHhcCCC----------HHHH------------------------HHHHHHHHHHcCCCccc-----cccc
Q 000284 542 TVREHLEMFAVLKGVK----------EELL------------------------ESVVAEMVDEVGLADKV-----NIVV 582 (1723)
Q Consensus 542 Tv~e~l~~~~~~~g~~----------~~~~------------------------~~~v~~~l~~~~l~~~~-----~~~~ 582 (1723)
||+|+|.|.++.++.. +++. +..++++++.+||.+.. |+.+
T Consensus 255 TV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~ 334 (1470)
T PLN03140 255 TVKETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMI 334 (1470)
T ss_pred cHHHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccc
Confidence 9999999988766421 1110 11357799999998765 4566
Q ss_pred CCCChhHHHHHHHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCH-HHHHhhcCEEEEEeCC
Q 000284 583 RALSGGMKRKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSM-DEAEELGDRIAIMANG 659 (1723)
Q Consensus 583 ~~LSgGqkqrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~-~e~~~l~dri~il~~G 659 (1723)
+.|||||||||+||+||+++|++++|||||+|||+.++.++.+.|+++. .|+|+|+++|+. +++..++|+|++|++|
T Consensus 335 rglSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G 414 (1470)
T PLN03140 335 RGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEG 414 (1470)
T ss_pred cCCCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCc
Confidence 8999999999999999999999999999999999999999999999985 489999999996 6899999999999999
Q ss_pred EEEEecCHHHHHhhhC-CcEEEEEEecCCChhhHHHHHHhhCCCceEEeeeCcEE-EEEecCC--CcchHHHHHHHHHHh
Q 000284 660 SLKCCGSSLFLKHQYG-VGYTLTLVKSAPDASAAADIVYRHIPSALCVSEVGTEI-TFKLPLA--SSSSFESMFREIESC 735 (1723)
Q Consensus 660 ~l~~~Gs~~~Lk~~~g-~gy~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~lp~~--~~~~~~~l~~~le~~ 735 (1723)
+++..|+..+++..|. .||. + |......+++..-.... +..... .-..|.. ....+.+.+++-+..
T Consensus 415 ~ivy~G~~~~~~~yF~~lGf~--c----P~~~n~ADFl~~v~s~~----~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~ 484 (1470)
T PLN03140 415 QIVYQGPRDHILEFFESCGFK--C----PERKGTADFLQEVTSKK----DQEQYWADRNKPYRYISVSEFAERFKSFHVG 484 (1470)
T ss_pred eEEEeCCHHHHHHHHHHcCCC--C----CCCCChHHHHHHhcCch----hhhhhhhccCCccccCCHHHHHHHHHhcHHH
Confidence 9999999998876553 4552 1 11112223333211100 000000 0001110 011122211111000
Q ss_pred hhhccccccccccccccCCCeeEEEecCCCHHHHHHHHhcCCCcchhhhhhccccccccccccccCCCCccccccccccC
Q 000284 736 IRKSVSKVEADATEDTDYLGIESFGISVTTLEEVFLRVAGCNLDESECISQRNNLVTLDYVSAESDDQAPKRISNCKLFG 815 (1723)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~i~~~~is~ttLEevfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (1723)
.+ ..+|+ . ...++.. ..... . + .
T Consensus 485 ~~---------------------------~~~~~----~-~~~~~~~-------------------~~~~~-~---~-~- 507 (1470)
T PLN03140 485 MQ---------------------------LENEL----S-VPFDKSQ-------------------SHKAA-L---V-F- 507 (1470)
T ss_pred HH---------------------------HHHHH----h-hhhhhhh-------------------ccccc-c---c-C-
Confidence 00 00000 0 0000000 00000 0 0 0
Q ss_pred CcccccceeeeeecchhhhhhHHhhhhhhhhcccccccccccchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHH-
Q 000284 816 NYKWVFGFIVTVVQRACTLIVAAVLGFLNFLIKKCCTCCIISRSMFWQHCKALFIKRAVSARRDRKTIVFQLLIPAIFL- 894 (1723)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~all~KR~~~~~R~~~~~~~~lllP~~~~- 894 (1723)
..-...++.|+++++++.+...+||+..+++.++.-+++.
T Consensus 508 ---------------------------------------~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~al 548 (1470)
T PLN03140 508 ---------------------------------------SKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAA 548 (1470)
T ss_pred ---------------------------------------CCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 0011346889999999999999999998887776655432
Q ss_pred HHHHHHHhccCCCCCCccccccccCCcccCCCCCCCCcccccCchhhhhhhhhhccCcccccccCCCCCCChHHHHHHHH
Q 000284 895 LVGLLFLKLKPHPDMLSVTFTTSNFNPLLSGGGGGGPIPFDLSWPIANEVSKYIQGGWIQRFKQSSYRFPNAEKALADAV 974 (1723)
Q Consensus 895 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 974 (1723)
++|.++.....+. + +.
T Consensus 549 i~GsvF~~~~~~~--~------------------------------------------------------~~-------- 564 (1470)
T PLN03140 549 IASTVFLRTEMHT--R------------------------------------------------------NE-------- 564 (1470)
T ss_pred HHHHHHhcCCCCC--C------------------------------------------------------cc--------
Confidence 3344433211000 0 00
Q ss_pred HhcCCCCccchhchhHHHHHhhhhcccccccEEEeeccCCCCceeEEEEeCCcCCChHHHHHHHHHHHHHHHhcCCCcce
Q 000284 975 DAAGPTLGPVLLSMSEYLMSSFNESYQSRYGAIVMDDQNDDGSLGFTVLHNSSCQHAGPTFINVMNTAILRLATGNRNMT 1054 (1723)
Q Consensus 975 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~N~~~~hs~p~~ln~l~nailr~~~~~~~~~ 1054 (1723)
.++ +
T Consensus 565 ---------------------------------------~~~--------------------~----------------- 568 (1470)
T PLN03140 565 ---------------------------------------EDG--------------------A----------------- 568 (1470)
T ss_pred ---------------------------------------hhH--------------------H-----------------
Confidence 000 0
Q ss_pred EEEEeecCCcchhhhhhhchhhhhHHHHHH--HHHHHHhhhHhhhHHHHHHHHHHHHHHHHhC-CchHHHHHHHHHHHHH
Q 000284 1055 IRTRNHPLPTTQSQQLQRHDLDAFSVSIII--SIAFSFIPASFAVAIVKEREVKAKQQQLISG-VSVLSYWTSTYIWDFI 1131 (1723)
Q Consensus 1055 I~~~n~Plp~~~~~~~~~~~~~~~~~~i~i--~~~~s~i~a~f~~~~V~ER~~k~k~lq~vsG-v~~~~YW~s~~i~D~i 1131 (1723)
.....+..++.+ ..+++-++..+ .||..=.||-.. + .++++|.++..+.|+.
T Consensus 569 ------------------~~~g~lff~~l~~~~~~~~~l~~~~-----~~r~vf~ker~~--~~Y~~~ay~la~~l~~iP 623 (1470)
T PLN03140 569 ------------------LYIGALLFSMIINMFNGFAELALMI-----QRLPVFYKQRDL--LFHPPWTFTLPTFLLGIP 623 (1470)
T ss_pred ------------------HHHHHHHHHHHHHHHHHHHHHHHHH-----hccchhHHhhhc--cCcCHHHHHHHHHHHHHH
Confidence 000000000000 01111122222 333332232222 3 4789999999999998
Q ss_pred HHHHHHHHHH-HHHHHHhccccccccchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHH----HHHHHHHHHH
Q 000284 1132 SFLFPSSCAI-ILFYIFGLDQFVGRGCLLPTVLIFLGYGLAIASSTYCLTFFFSDHTMAQNVVLLV----HFFTGLILMV 1206 (1723)
Q Consensus 1132 ~~li~~~~~i-ii~~~f~~~~~~~~~~~~~~~lllllyG~a~i~~~Yl~Sf~F~~~~~a~~~~~~~----~~~~g~~~~i 1206 (1723)
..++.+++.. ++++..+... +.+.++..++++++..++...+..+++.++.+...|.....++ .++.|+
T Consensus 624 ~~~i~~~if~~I~Y~m~Gl~~--~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf---- 697 (1470)
T PLN03140 624 ISIIESVVWVVITYYSIGFAP--EASRFFKQLLLVFLIQQMAAGIFRLIASVCRTMIIANTGGALVLLLVFLLGGF---- 697 (1470)
T ss_pred HHHHHHHHHHhHHhhhcCCCC--chhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccc----
Confidence 8776665544 4444444332 2334555555555666666666677777766655544332211 111121
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhhhhhhHHHHHHHhhcccCC------CC--------CCccc-cccchhhHHHH
Q 000284 1207 ISFIMGLLEATRSANSLLKNFFRLSPGFCFADGLASLALLRQGMKDK------TS--------DGVFD-WNVTSASICYL 1271 (1723)
Q Consensus 1207 ~~~il~~~~~~~~~~~~l~~~f~l~P~~~l~~gl~~l~~~~~~~~~~------~~--------~~~~~-~~~~g~~i~~l 1271 (1723)
+-........++|+..+.|..--..+++.-.......... .. .+... ....+.++..|
T Consensus 698 -------~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~iL 770 (1470)
T PLN03140 698 -------ILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDNSTRLGTAVLNIFDVFTDKNWYWIGVGAL 770 (1470)
T ss_pred -------eechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCCCcccHHHHHHhcCcCccccchhhhHHHH
Confidence 1112233344556665666322222222211100000000 00 00000 01122333444
Q ss_pred HHHHHHHHHH-HHHHHhccccchhhhHHhhhhccccccccCCCC-CC-----Cccccc---CC---CCCCcC-CCCcchh
Q 000284 1272 GCESICYFLL-TLGLELLPSHKWTLMTIKEWWKGTRHRLCNTPS-SY-----LEPLLQ---SS---SESDTL-DLNEDID 1337 (1723)
Q Consensus 1272 ~~~~i~~~ll-~l~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~---~~---~~~~~~-~~~eD~d 1337 (1723)
++-.++|.++ .+.+++....... ....++.......... .. .+.... .. +..... ....+..
T Consensus 771 ~~~~v~f~~l~~l~L~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (1470)
T PLN03140 771 LGFTILFNVLFTLALTYLNPLGKK----QAIISEETAEEMEGEEDSIPRSLSSADGNNTREVAIQRMSNPEGLSKNRDSS 846 (1470)
T ss_pred HHHHHHHHHHHHHHHHhcCccCCC----Cccccccchhhhhccccccccccccccccccccccccccccccccccccccc
Confidence 4444444443 2334432110000 0000000000000000 00 000000 00 000000 0000000
Q ss_pred hHHHhhhccc--C---CCCcceEEEEeEEEEcCCCC-------ccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHH
Q 000284 1338 VQVERNRVLS--G---SVDNAIIYLRNLRKVYPGGK-------RSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSM 1405 (1723)
Q Consensus 1338 V~~Er~rv~~--~---~~~~~~l~v~~l~k~y~~~~-------~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~ 1405 (1723)
.. +...+.. + ......+..+||++..+... ..+++.+|+|+|+.+++||+++|+||||||||||+++
T Consensus 847 ~~-~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~ 925 (1470)
T PLN03140 847 LE-AANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDV 925 (1470)
T ss_pred cc-cccccccccccccCCCcceEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHH
Confidence 00 0000000 0 01123589999998875321 0134579999999999999999999999999999999
Q ss_pred HhCCCCC--CceEEEEcCeeCCCChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHc---CCChhhHHHHHHHHHHHcC
Q 000284 1406 ISGEEYP--TDGTAFIFGKDIRSDPKAARRLIGYCPQFDALLEYLTVQEHLELYARIK---GVAEYRMDDVVMEKLVEFD 1480 (1723)
Q Consensus 1406 l~G~~~p--~~G~i~i~G~~i~~~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~---g~~~~~~~~~~~~~l~~~~ 1480 (1723)
|+|..++ .+|+|.++|++... ...++.+|||+|++.+++.+||+|+|.+.+.++ ..+.++..+.++++++.++
T Consensus 926 LaG~~~~g~~~G~I~inG~~~~~--~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lg 1003 (1470)
T PLN03140 926 LAGRKTGGYIEGDIRISGFPKKQ--ETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVE 1003 (1470)
T ss_pred HcCCCCCCcccceEEECCccCCh--HHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCC
Confidence 9999763 78999999987642 345677999999999999999999999887654 2333445567889999999
Q ss_pred CccccCCCC-----CCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHH-
Q 000284 1481 LLKHAKKPS-----FTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMN- 1554 (1723)
Q Consensus 1481 l~~~~~~~~-----~~LSgG~kqrl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~- 1554 (1723)
|.+.+++.+ +.|||||||||+||++|+.+|+||+|||||+|||+.++..+++.|+++++ +| +|||+|||+++
T Consensus 1004 L~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~-~g-~tVI~t~Hq~~~ 1081 (1470)
T PLN03140 1004 LDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TG-RTVVCTIHQPSI 1081 (1470)
T ss_pred ChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCCCH
Confidence 998888886 58999999999999999999999999999999999999999999999964 45 58999999998
Q ss_pred HHHHHcCEEEEEEC-CEEEEecCh----hHHHhhc
Q 000284 1555 EAQALCTRIGIMVG-GQLRCIGSP----QHLKTRF 1584 (1723)
Q Consensus 1555 e~~~l~drv~im~~-G~l~~~g~~----~~l~~~~ 1584 (1723)
++..+|||+++|++ |++++.|++ +++.+-|
T Consensus 1082 ~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF 1116 (1470)
T PLN03140 1082 DIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYF 1116 (1470)
T ss_pred HHHHhCCEEEEEcCCCEEEEECCcccccccHHHHH
Confidence 57789999999996 899999986 3455444
No 11
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-74 Score=736.81 Aligned_cols=215 Identities=32% Similarity=0.462 Sum_probs=191.1
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHH-HHh
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMD-EIR 525 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~-~~r 525 (1723)
+.++++|++|.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ... ..+
T Consensus 4 ~~l~~~~l~~~~~~----~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 79 (510)
T PRK09700 4 PYISMAGIGKSFGP----VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQ 79 (510)
T ss_pred ceEEEeeeEEEcCC----eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHH
Confidence 46999999999953 469999999999999999999999999999999999999999999999998854 222 235
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHH----hcCC---CHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHH
Q 000284 526 KGLGVCPQYDILFPELTVREHLEMFAV----LKGV---KEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIA 598 (1723)
Q Consensus 526 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~----~~g~---~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~a 598 (1723)
+++||+||++.+++.+||+||+.+... ..+. +.++.++++.++++.+||.+..++++++|||||||||+||+|
T Consensus 80 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qrv~ia~a 159 (510)
T PRK09700 80 LGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKVANLSISHKQMLEIAKT 159 (510)
T ss_pred CCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccchhhCCHHHHHHHHHHHH
Confidence 679999999999999999999986432 1222 234556788999999999988999999999999999999999
Q ss_pred HhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecC
Q 000284 599 LIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGS 666 (1723)
Q Consensus 599 l~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs 666 (1723)
|+.+|++|||||||+|||+.++++++++|++++ +|+|||++||+++++..+||||++|++|++++.|+
T Consensus 160 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~ 228 (510)
T PRK09700 160 LMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGM 228 (510)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecc
Confidence 999999999999999999999999999999986 48999999999999999999999999999876554
No 12
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=7e-74 Score=729.34 Aligned_cols=214 Identities=25% Similarity=0.431 Sum_probs=191.0
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCcc--HHHHh
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITAD--MDEIR 525 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~--~~~~r 525 (1723)
+.|+++||+|.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ....+
T Consensus 3 ~~i~~~~l~~~~~~----~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~ 78 (501)
T PRK10762 3 ALLQLKGIDKAFPG----VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQE 78 (501)
T ss_pred ceEEEeeeEEEeCC----eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHh
Confidence 36999999999953 4699999999999999999999999999999999999999999999999987532 22345
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhc----CCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhc
Q 000284 526 KGLGVCPQYDILFPELTVREHLEMFAVLK----GVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIG 601 (1723)
Q Consensus 526 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~----g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~ 601 (1723)
+.+||+||++.+++.+||+||+.++.... ..+.++.+++++++++.+||.+..++++++||||||||++||+||+.
T Consensus 79 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~ 158 (501)
T PRK10762 79 AGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLVGELSIGEQQMVEIAKVLSF 158 (501)
T ss_pred CCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCchhhCCHHHHHHHHHHHHHhc
Confidence 78999999999999999999998864332 12344556778999999999988999999999999999999999999
Q ss_pred CCcEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEec
Q 000284 602 DSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 665 (1723)
Q Consensus 602 ~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~G 665 (1723)
+|++|||||||+|||+.++++++++|++++ +|+|||++||+++++..+||||++|++|+++..|
T Consensus 159 ~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~ 223 (501)
T PRK10762 159 ESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAER 223 (501)
T ss_pred CCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEec
Confidence 999999999999999999999999999985 4889999999999999999999999999987544
No 13
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=2.2e-73 Score=725.57 Aligned_cols=211 Identities=24% Similarity=0.418 Sum_probs=186.8
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCC--CcceEEEccccCCc-cH-HHHh
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP--TTGDALVFGKNITA-DM-DEIR 525 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p--~~G~i~i~g~~i~~-~~-~~~r 525 (1723)
++++||+|.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. +. ...+
T Consensus 2 l~i~~l~~~~~~----~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 77 (500)
T TIGR02633 2 LEMKGIVKTFGG----VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTER 77 (500)
T ss_pred EEEEeEEEEeCC----eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHh
Confidence 789999999953 4699999999999999999999999999999999999997 79999999998854 22 2345
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhc--C--CCHHHHHHHHHHHHHHcCCCccc-ccccCCCChhHHHHHHHHHHHh
Q 000284 526 KGLGVCPQYDILFPELTVREHLEMFAVLK--G--VKEELLESVVAEMVDEVGLADKV-NIVVRALSGGMKRKLSLGIALI 600 (1723)
Q Consensus 526 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~--g--~~~~~~~~~v~~~l~~~~l~~~~-~~~~~~LSgGqkqrl~lA~al~ 600 (1723)
+.+||+||++.+++.+||+||+.+..... + .+.++.+++++++++.+|+.+.. ++++++|||||||||+||+||+
T Consensus 78 ~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~iA~al~ 157 (500)
T TIGR02633 78 AGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRPVGDYGGGQQQLVEIAKALN 157 (500)
T ss_pred CCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCchhhCCHHHHHHHHHHHHHh
Confidence 78999999999999999999998764332 1 33445567889999999998764 6789999999999999999999
Q ss_pred cCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEe
Q 000284 601 GDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCC 664 (1723)
Q Consensus 601 ~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~ 664 (1723)
.+|++|||||||+|||+.++++++++|++++ +|+|||++||+++++..+||||++|++|+++..
T Consensus 158 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~ 222 (500)
T TIGR02633 158 KQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVAT 222 (500)
T ss_pred hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeee
Confidence 9999999999999999999999999999985 589999999999999999999999999998643
No 14
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=4.7e-73 Score=722.09 Aligned_cols=212 Identities=25% Similarity=0.456 Sum_probs=190.9
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHH-Hh
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDE-IR 525 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~-~r 525 (1723)
+.|+++||+|.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .... .+
T Consensus 10 ~~l~~~~l~~~~~~----~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 85 (510)
T PRK15439 10 PLLCARSISKQYSG----VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQ 85 (510)
T ss_pred ceEEEEeEEEEeCC----ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHh
Confidence 47999999999953 469999999999999999999999999999999999999999999999998854 2223 34
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcE
Q 000284 526 KGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 605 (1723)
Q Consensus 526 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 605 (1723)
+.+||+||++.+++.+||+||+.+.... ..+.+++++++++.+||.+..++++++|||||||||+|||||+.+|++
T Consensus 86 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~----~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~aL~~~p~l 161 (510)
T PRK15439 86 LGIYLVPQEPLLFPNLSVKENILFGLPK----RQASMQKMKQLLAALGCQLDLDSSAGSLEVADRQIVEILRGLMRDSRI 161 (510)
T ss_pred CCEEEEeccCccCCCCcHHHHhhccccc----chHHHHHHHHHHHHcCCCccccCChhhCCHHHHHHHHHHHHHHcCCCE
Confidence 5799999999999999999999875321 234457789999999999889999999999999999999999999999
Q ss_pred eeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCH
Q 000284 606 VILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSS 667 (1723)
Q Consensus 606 liLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~ 667 (1723)
|||||||+|||+.++++++++|++++ +|+|||++||+++++..+||||++|++|+++..|++
T Consensus 162 llLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~ 224 (510)
T PRK15439 162 LILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKT 224 (510)
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCh
Confidence 99999999999999999999999985 589999999999999999999999999999877764
No 15
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-73 Score=721.65 Aligned_cols=212 Identities=27% Similarity=0.461 Sum_probs=190.7
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc--cHHHHh
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA--DMDEIR 525 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~--~~~~~r 525 (1723)
+.++++||+|.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .....|
T Consensus 3 ~~l~~~~l~~~~~~----~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~ 78 (501)
T PRK11288 3 PYLSFDGIGKTFPG----VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALA 78 (501)
T ss_pred ceEEEeeeEEEECC----EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHh
Confidence 46999999999953 469999999999999999999999999999999999999999999999998753 234467
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHH--hcC-CCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcC
Q 000284 526 KGLGVCPQYDILFPELTVREHLEMFAV--LKG-VKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGD 602 (1723)
Q Consensus 526 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~--~~g-~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~ 602 (1723)
+++||+||++.+++.+||.||+.+... ..+ .+..+.++++.++++.+||.+..++++.+||||||||++|||||+.+
T Consensus 79 ~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~laral~~~ 158 (501)
T PRK11288 79 AGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPLKYLSIGQRQMVEIAKALARN 158 (501)
T ss_pred CCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCchhhCCHHHHHHHHHHHHHHhC
Confidence 889999999999999999999987532 123 34455667899999999999888999999999999999999999999
Q ss_pred CcEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEE
Q 000284 603 SKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKC 663 (1723)
Q Consensus 603 p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~ 663 (1723)
|++|||||||+|||+.++++++++|++++ +|+|||++||+++++..+||||++|++|+++.
T Consensus 159 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~ 220 (501)
T PRK11288 159 ARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVA 220 (501)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 99999999999999999999999999985 58999999999999999999999999999864
No 16
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-72 Score=713.15 Aligned_cols=211 Identities=26% Similarity=0.399 Sum_probs=187.2
Q ss_pred EEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc--cHHHHhcceE
Q 000284 452 IRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA--DMDEIRKGLG 529 (1723)
Q Consensus 452 i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~--~~~~~r~~ig 529 (1723)
++||+|.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.. .....++.+|
T Consensus 1 ~~nl~~~~~~----~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 76 (491)
T PRK10982 1 MSNISKSFPG----VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGIS 76 (491)
T ss_pred CCceEEEeCC----EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEE
Confidence 3689999953 469999999999999999999999999999999999999999999999998853 2334567899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHH-hcC--CCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEe
Q 000284 530 VCPQYDILFPELTVREHLEMFAV-LKG--VKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVV 606 (1723)
Q Consensus 530 ~~~Q~~~l~~~lTv~e~l~~~~~-~~g--~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vl 606 (1723)
|+||++.+++.+||+||+.+... ..+ .+.++..++++++++.+|+.+..++++.+|||||||||+|||||+.+|++|
T Consensus 77 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~lA~al~~~p~ll 156 (491)
T PRK10982 77 MVHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKVATLSVSQMQMIEIAKAFSYNAKIV 156 (491)
T ss_pred EEecccccccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCchhhCCHHHHHHHHHHHHHHhCCCEE
Confidence 99999999999999999987532 223 234445678899999999998889999999999999999999999999999
Q ss_pred eccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecC
Q 000284 607 ILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGS 666 (1723)
Q Consensus 607 iLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs 666 (1723)
||||||+|||+.++++++++|++++ +|+|||++||+++++..+||||++|++|+++..|+
T Consensus 157 lLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~ 217 (491)
T PRK10982 157 IMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQP 217 (491)
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecC
Confidence 9999999999999999999999985 58999999999999999999999999999875443
No 17
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=4.3e-71 Score=702.84 Aligned_cols=207 Identities=23% Similarity=0.291 Sum_probs=182.8
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhcc
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 527 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 527 (1723)
+|+++||+|.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +....++.
T Consensus 3 ~l~~~~l~~~~~~----~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~ 78 (490)
T PRK10938 3 SLQISQGTFRLSD----TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKL 78 (490)
T ss_pred eEEEEeEEEEcCC----eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHH
Confidence 5899999999953 359999999999999999999999999999999999999999999999987643 33445667
Q ss_pred eEEEccCCCC--C-C-----CCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHH
Q 000284 528 LGVCPQYDIL--F-P-----ELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIAL 599 (1723)
Q Consensus 528 ig~~~Q~~~l--~-~-----~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al 599 (1723)
+|++||++.+ + + .+||+|++.+. ...+++++++++.+||.+..++++++|||||||||+||+||
T Consensus 79 i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al 150 (490)
T PRK10938 79 VSDEWQRNNTDMLSPGEDDTGRTTAEIIQDE--------VKDPARCEQLAQQFGITALLDRRFKYLSTGETRKTLLCQAL 150 (490)
T ss_pred hceeccCcchhhcccchhhccccHHHhcccc--------hhHHHHHHHHHHHcCCHhhhhCCcccCCHHHHHHHHHHHHH
Confidence 9999998643 1 1 47888887542 12356788999999999889999999999999999999999
Q ss_pred hcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCH
Q 000284 600 IGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSS 667 (1723)
Q Consensus 600 ~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~ 667 (1723)
+.+|++|||||||+|||+.++++++++|++++ +|+|||++||+++++..+||||++|++|+++..|++
T Consensus 151 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~ 219 (490)
T PRK10938 151 MSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGER 219 (490)
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999985 489999999999999999999999999999876654
No 18
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.2e-68 Score=740.06 Aligned_cols=221 Identities=20% Similarity=0.317 Sum_probs=185.6
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC---------------------
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP--------------------- 1412 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p--------------------- 1412 (1723)
.|+++||+++|+++ +++++|+|+||+|++||++||+||+||||||++++|.|+++|
T Consensus 1165 ~I~f~nVsF~Y~~~---~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~ 1241 (1466)
T PTZ00265 1165 KIEIMDVNFRYISR---PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQD 1241 (1466)
T ss_pred eEEEEEEEEECCCC---CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccccccccccc
Confidence 48999999999752 134699999999999999999999999999999999999998
Q ss_pred ---------------------------------CceEEEEcCeeCCC-ChHHhccceEEEecCCCCCCCCCHHHHHHHHH
Q 000284 1413 ---------------------------------TDGTAFIFGKDIRS-DPKAARRLIGYCPQFDALLEYLTVQEHLELYA 1458 (1723)
Q Consensus 1413 ---------------------------------~~G~i~i~G~~i~~-~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~ 1458 (1723)
++|+|.+||.|++. +...+|++||||||++.||+ .|++|||.++.
T Consensus 1242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~-gTIreNI~~g~ 1320 (1466)
T PTZ00265 1242 YQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFN-MSIYENIKFGK 1320 (1466)
T ss_pred cccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcccc-ccHHHHHhcCC
Confidence 69999999999977 67788999999999999986 79999998742
Q ss_pred HHcCCChhhHHHHHHHHHHHcCCc-----------cccCCCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHH
Q 000284 1459 RIKGVAEYRMDDVVMEKLVEFDLL-----------KHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAK 1527 (1723)
Q Consensus 1459 ~~~g~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgG~kqrl~iA~al~~~p~vllLDEPT~gLD~~~~ 1527 (1723)
. ..+. +.+.++++..++. .........||||||||++|||||+++|+|||||||||+||+.+.
T Consensus 1321 ~--~at~----eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~~sE 1394 (1466)
T PTZ00265 1321 E--DATR----EDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSNSE 1394 (1466)
T ss_pred C--CCCH----HHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHH
Confidence 1 2222 2344445544443 233345668999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEEC----CEEE-EecChhHHHhh-cCC
Q 000284 1528 RFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVG----GQLR-CIGSPQHLKTR-FGN 1586 (1723)
Q Consensus 1528 ~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~----G~l~-~~g~~~~l~~~-~~~ 1586 (1723)
+.+.+.|.++...++ +|+|++||+++.+.. ||||++|++ |+++ +.|+.++|.++ .|.
T Consensus 1395 ~~I~~~L~~~~~~~~-~TvIiIaHRlsti~~-aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~ 1457 (1466)
T PTZ00265 1395 KLIEKTIVDIKDKAD-KTIITIAHRIASIKR-SDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGV 1457 (1466)
T ss_pred HHHHHHHHHHhccCC-CEEEEEechHHHHHh-CCEEEEEeCCCCCCCEEEEecCHHHHHhcCCCh
Confidence 999999998742233 589999999998875 999999999 9955 89999999863 443
No 19
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-69 Score=687.04 Aligned_cols=207 Identities=25% Similarity=0.334 Sum_probs=182.1
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1432 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~ 1432 (1723)
.+|+++||+|+|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.
T Consensus 318 ~~l~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~~---------- 381 (530)
T PRK15064 318 NALEVENLTKGFDN------GPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSEN---------- 381 (530)
T ss_pred ceEEEEeeEEeeCC------ceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCc----------
Confidence 57999999999953 45899999999999999999999999999999999999999999999873
Q ss_pred cceEEEecCCC--CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHHHhcC
Q 000284 1433 RLIGYCPQFDA--LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIAMIGD 1509 (1723)
Q Consensus 1433 ~~ig~~pQ~~~--l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~kqrl~iA~al~~~ 1509 (1723)
+++||+||++. +++.+|++|++.++.. .. ..++++.++++.+++. +..++++.+|||||||||+||+||+.+
T Consensus 382 ~~i~~~~q~~~~~~~~~~t~~~~~~~~~~----~~-~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la~al~~~ 456 (530)
T PRK15064 382 ANIGYYAQDHAYDFENDLTLFDWMSQWRQ----EG-DDEQAVRGTLGRLLFSQDDIKKSVKVLSGGEKGRMLFGKLMMQK 456 (530)
T ss_pred eEEEEEcccccccCCCCCcHHHHHHHhcc----CC-ccHHHHHHHHHHcCCChhHhcCcccccCHHHHHHHHHHHHHhcC
Confidence 46999999863 5567999999865321 11 1235677899999994 678999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEE-EecChhHHHhhcC
Q 000284 1510 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLR-CIGSPQHLKTRFG 1585 (1723)
Q Consensus 1510 p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~-~~g~~~~l~~~~~ 1585 (1723)
|++|||||||+|||+.+++.+++.|+++ ++ |||++|||++++..+|||+++|++|+++ +.|+++++.+..+
T Consensus 457 p~lllLDEPt~~LD~~~~~~l~~~l~~~----~~-tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~~~ 528 (530)
T PRK15064 457 PNVLVMDEPTNHMDMESIESLNMALEKY----EG-TLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRSQG 528 (530)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHC----CC-EEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHHhC
Confidence 9999999999999999999999999875 23 8999999999999999999999999998 8899988876543
No 20
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=3.8e-69 Score=611.31 Aligned_cols=223 Identities=26% Similarity=0.475 Sum_probs=200.6
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCC-----CcceEEEccccCCc---
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA--- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~--- 519 (1723)
+.++++||+..|....+.+.||+++||++++||.+||+|++|||||-+.+.+.|+++- -+|+|.++|.|+-.
T Consensus 5 ~lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se 84 (534)
T COG4172 5 PLLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASE 84 (534)
T ss_pred cceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCH
Confidence 5789999999998777778999999999999999999999999999999999999985 37999999999842
Q ss_pred -cHHHHh-cceEEEccCC--CCCCCCCHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHcCCCc---ccccccCCCChhHHH
Q 000284 520 -DMDEIR-KGLGVCPQYD--ILFPELTVREHLEMFAV-LKGVKEELLESVVAEMVDEVGLAD---KVNIVVRALSGGMKR 591 (1723)
Q Consensus 520 -~~~~~r-~~ig~~~Q~~--~l~~~lTv~e~l~~~~~-~~g~~~~~~~~~v~~~l~~~~l~~---~~~~~~~~LSgGqkq 591 (1723)
.+..+| .+||+++|+| .|.|-.|+...+.-..+ .+|++++++++++.++|+.+|+.+ ..+.++++|||||||
T Consensus 85 ~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p~~rl~~yPHeLSGGqRQ 164 (534)
T COG4172 85 RQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEPEKRLDAYPHELSGGQRQ 164 (534)
T ss_pred HHHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCchhhhhhhCCcccCcchhh
Confidence 455566 5799999998 58888899888765444 468899999999999999999986 358899999999999
Q ss_pred HHHHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHH
Q 000284 592 KLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLF 669 (1723)
Q Consensus 592 rl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~ 669 (1723)
||.||+||+.+|++||-||||++||..-+.++.++|+++++ |.+++++|||+.-+..+||||+||.+|++++.|+.+.
T Consensus 165 RVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~ivE~~~t~~ 244 (534)
T COG4172 165 RVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGEIVETGTTET 244 (534)
T ss_pred HHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccEEeecCcHHH
Confidence 99999999999999999999999999999999999999963 9999999999999999999999999999998877544
Q ss_pred H
Q 000284 670 L 670 (1723)
Q Consensus 670 L 670 (1723)
|
T Consensus 245 l 245 (534)
T COG4172 245 L 245 (534)
T ss_pred H
Confidence 4
No 21
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=8.3e-68 Score=724.83 Aligned_cols=567 Identities=26% Similarity=0.415 Sum_probs=426.5
Q ss_pred eeEeccCCCccCchH---HHHHHHHHHHHHHHHHHHhHHHHHhhHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHH
Q 000284 153 IRMVPFPTREYTDDE---FQSIIKRVMGVLYLLGFLYPISRLISYSVFEKEQKIREGLYMMGLKDGIFHLSWFITYAAQF 229 (1723)
Q Consensus 153 ~~~~~fp~~~~~~d~---~~~~~~~~~~~~~~l~~~~~~~~~v~~iV~EKe~~lke~m~~mGl~~~~~wlsw~i~~~~~~ 229 (1723)
+...|+|........ .......+++++++++|.+..+.++.++|.|||+|.|+++.++|++..+||++.|+.-++.+
T Consensus 1656 v~N~Plp~t~~~~~~~~~~~~~~~~~iai~ii~~~sfi~asfv~~~V~ER~skaK~lQ~vSGv~~~~YWls~fl~D~~~y 1735 (2272)
T TIGR01257 1656 VISQPLNLTKEQLSEITVLTTSVDAVVAICVIFAMSFVPASFVLYLIQERVNKAKHLQFISGVSPTTYWLTNFLWDIMNY 1735 (2272)
T ss_pred EEecCCCCchhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHheeeehHHhhhHHHHHHHhCCCcHHHHHHHHHHHHHHH
Confidence 456788865422111 11123345677778888888889999999999999999999999999999999999877766
Q ss_pred HHHHHHHHHH-h---hcccccccCchhhHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHH-HHh---hhhh---
Q 000284 230 AVSSGIITAC-T---MDSLFKYSDKTVVFTYFFSFGLSAITLSFFISTFFARAKTAVAVGTLSFLG-AFF---PYYT--- 298 (1723)
Q Consensus 230 ~i~~~ii~~~-~---~~~~~~~s~~~~~f~~~~l~~~s~i~~~~~iS~fF~~~~~a~~~~~l~~~~-~~~---p~~~--- 298 (1723)
++.+++++++ . ...+....++..+++++++||+|.|.|+|++|.+|+++..|.+...++.++ .++ ..++
T Consensus 1736 ~i~~~~~i~i~~~f~~~~~~~~~~l~~~~lll~lyG~a~ip~tYl~SflF~~~~~A~~~~~~in~~~G~~~~i~~~il~~ 1815 (2272)
T TIGR01257 1736 AVSAGLVVGIFIGFQKKAYTSPENLPALVALLMLYGWAVIPMMYPASFLFDVPSTAYVALSCANLFIGINSSAITFVLEL 1815 (2272)
T ss_pred HHHHHHHHHHHHHhChhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6655444322 1 112223346677888999999999999999999999999887654332211 111 1111
Q ss_pred ccC----CCchhHHhHHHhhhchhHHHHHHHHHHHHhhc-----ccCccc-cccccCCCCchHHHHHHHHHHHHHHHHHH
Q 000284 299 VND----EAVPMVLKVIASLLSPTAFALGSVNFADYERA-----HVGLRW-SNMWRASSGVNFLVCLLMMLLDTLLYGVI 368 (1723)
Q Consensus 299 ~~~----~~~~~~~~~~~~l~~~~~~~~g~~~~~~~e~~-----~~g~~~-~~~~~~~~~~~~~~~~~~l~~d~~ly~~l 368 (1723)
... ......+++++.++|..+++.|+..++....- ..|-.. .+.+.- ...+..+++|++++++|++|
T Consensus 1816 ~~~~~~~~~~~~~l~~if~i~P~f~lg~gl~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~ll~m~~~~iv~flL 1892 (2272)
T TIGR01257 1816 FENNRTLLRFNAMLRKLLIVFPHFCLGRGLIDLALSQAVTDVYAQFGEEHSANPFQW---DLIGKNLVAMAVEGVVYFLL 1892 (2272)
T ss_pred hcccchhhhHHHHHHHHHeeCchhhhHHHHHHHHHhHHHHHHHHhhcccccCCccch---hhccHHHHHHHHHHHHHHHH
Confidence 111 12245678888899999999998777643210 011000 011100 01234567888999999999
Q ss_pred HHHhhccccCCCCccccccccccccccCcccccccccchhhHHhhhhhhhhhhhhhhcccCchhhhhhhhcccccccCcc
Q 000284 369 GLYLDKVLPKENGVRYRWNFIFQNCFRRKKSVIKHHVSSAEVKINKKLSKEKECAFALDACEPVVEAISLDMKQQEVDGR 448 (1723)
Q Consensus 369 ~~yld~v~p~~~G~~~p~~f~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 448 (1723)
.+++|.-. .+.. |.+... +. . . .++|.++.. |+.. .........
T Consensus 1893 l~~ie~~~-----~~~~---------~~~~~~-~~------~-~----~~eD~DV~~--------Er~r--V~~~~~~~~ 1936 (2272)
T TIGR01257 1893 TLLIQHHF-----FLSR---------WIAEPA-KE------P-I----FDEDDDVAE--------ERQR--IISGGNKTD 1936 (2272)
T ss_pred HHHHHhhh-----hhhh---------hccccC-cC------c-C----CCchhHHHH--------HHHH--HhccCCCCc
Confidence 99999521 0011 111110 00 0 0 001111110 1100 001111235
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcce
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGL 528 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~i 528 (1723)
.|+++||+|.|+++ ++.||+|+||+|++||++||+||||||||||+++|+|+++|++|+|+++|+++..+..+.|++|
T Consensus 1937 ~L~v~nLsK~Y~~~--~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~~~~~~r~~I 2014 (2272)
T TIGR01257 1937 ILRLNELTKVYSGT--SSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNISDVHQNM 2014 (2272)
T ss_pred eEEEEEEEEEECCC--CceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcchHHHHhhhE
Confidence 79999999999642 2579999999999999999999999999999999999999999999999999976666778899
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeec
Q 000284 529 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVIL 608 (1723)
Q Consensus 529 g~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliL 608 (1723)
|||||++.+++.+||+||+.+++.++|.+.++.+++++++++.+||.+..|+++++|||||||||+||+||+++|+||||
T Consensus 2015 Gy~pQ~~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~v~~lLe~lgL~~~~dk~~~~LSGGqKqRLslA~ALi~~P~VLLL 2094 (2272)
T TIGR01257 2015 GYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQSLGLSLYADRLAGTYSGGNKRKLSTAIALIGCPPLVLL 2094 (2272)
T ss_pred EEEeccccCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999999999999999988777788899999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhhhCCcEEEEEEecCC
Q 000284 609 DEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGVGYTLTLVKSAP 687 (1723)
Q Consensus 609 DEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~g~gy~l~~~~~~~ 687 (1723)
||||+||||.+|+.+|++|++++ +|+|||+|||+|+|++.+||||++|++|+++|.|++++||++||.||.+++..+..
T Consensus 2095 DEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~~~Gs~q~Lk~~~g~g~~l~i~~~~~ 2174 (2272)
T TIGR01257 2095 DEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHLKSKFGDGYIVTMKIKSP 2174 (2272)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHHhCCceEEEEEEcCc
Confidence 99999999999999999999985 58999999999999999999999999999999999999999999999998765432
Q ss_pred Ch------hhHHHHHHhhCCCceEEeeeCcEEEEEecCCCcchHHHHHHHHHHhhhhccccccccccccccCCCeeEEEe
Q 000284 688 DA------SAAADIVYRHIPSALCVSEVGTEITFKLPLASSSSFESMFREIESCIRKSVSKVEADATEDTDYLGIESFGI 761 (1723)
Q Consensus 688 ~~------~~~~~~~~~~~p~~~~~~~~~~~~~~~lp~~~~~~~~~l~~~le~~~~~~~~~~~~~~~~~~~~~~i~~~~i 761 (1723)
.. ....+.+.+.+|++...+.....++|.+|.. .+.++|+.+++. +..++|.+|++
T Consensus 2175 ~~~~~~~~~~v~~~i~~~fp~a~~~e~~~~~l~~~i~~~---~~~~if~~L~~~---------------k~~l~I~dysv 2236 (2272)
T TIGR01257 2175 KDDLLPDLNPVEQFFQGNFPGSVQRERHYNMLQFQVSSS---SLARIFQLLISH---------------KDSLLIEEYSV 2236 (2272)
T ss_pred chhhhhHHHHHHHHHhhcCccceeeccccceEEEEeCcc---cHHHHHHHHHhc---------------CCCCCeEEEEc
Confidence 21 1233456677898877766677888999853 577888888763 34689999999
Q ss_pred cCCCHHHHHHHHhcCCC
Q 000284 762 SVTTLEEVFLRVAGCNL 778 (1723)
Q Consensus 762 s~ttLEevfl~~~~~~~ 778 (1723)
+++||||||+++++.+.
T Consensus 2237 sqtSLE~VFl~l~~~q~ 2253 (2272)
T TIGR01257 2237 TQTTLDQVFVNFAKQQT 2253 (2272)
T ss_pred CCCCHHHHHHHHhcccc
Confidence 99999999999987643
No 22
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=6.7e-68 Score=680.98 Aligned_cols=207 Identities=27% Similarity=0.372 Sum_probs=178.6
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1432 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~ 1432 (1723)
++|+++||++.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.+++ ++
T Consensus 323 ~~l~~~~l~~~~~~------~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-~~-------- 387 (556)
T PRK11819 323 KVIEAENLSKSFGD------RLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGE-TV-------- 387 (556)
T ss_pred eEEEEEeEEEEECC------eeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-ce--------
Confidence 57999999999953 4699999999999999999999999999999999999999999999843 21
Q ss_pred cceEEEecCC-CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCcc-ccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000284 1433 RLIGYCPQFD-ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLK-HAKKPSFTLSGGNKRKLSVAIAMIGDP 1510 (1723)
Q Consensus 1433 ~~ig~~pQ~~-~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG~kqrl~iA~al~~~p 1510 (1723)
+|||+||++ .+++.+|++||+.+.....+.... +..+.++++.+++.+ ..++++++|||||||||+||+||+.+|
T Consensus 388 -~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~--~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p 464 (556)
T PRK11819 388 -KLAYVDQSRDALDPNKTVWEEISGGLDIIKVGNR--EIPSRAYVGRFNFKGGDQQKKVGVLSGGERNRLHLAKTLKQGG 464 (556)
T ss_pred -EEEEEeCchhhcCCCCCHHHHHHhhccccccccc--HHHHHHHHHhCCCChhHhcCchhhCCHHHHHHHHHHHHHhcCC
Confidence 499999996 788889999999876433333221 223457899999964 579999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEEC-CEEE-EecChhHHHh
Q 000284 1511 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVG-GQLR-CIGSPQHLKT 1582 (1723)
Q Consensus 1511 ~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~-G~l~-~~g~~~~l~~ 1582 (1723)
++|||||||+|||+.+++.+++.|+++ . + |||++|||+++++.+||||++|++ |++. ..|+.+++.+
T Consensus 465 ~lllLDEPt~~LD~~~~~~l~~~l~~~--~-~--tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~ 533 (556)
T PRK11819 465 NVLLLDEPTNDLDVETLRALEEALLEF--P-G--CAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNFQEYEE 533 (556)
T ss_pred CEEEEcCCCCCCCHHHHHHHHHHHHhC--C-C--eEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCHHHHHH
Confidence 999999999999999999999999986 2 3 799999999999999999999986 7876 4777776543
No 23
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.4e-68 Score=643.39 Aligned_cols=212 Identities=29% Similarity=0.489 Sum_probs=197.0
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCC--ccHHHHh
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNIT--ADMDEIR 525 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~--~~~~~~r 525 (1723)
+.++++|++|+|+ .++||+|+||++++|||+||+|+||||||||+|+|+|.++||+|+|.++|+.+. +..+..+
T Consensus 7 ~ll~~~~i~K~Fg----gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~ 82 (500)
T COG1129 7 PLLELRGISKSFG----GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALA 82 (500)
T ss_pred ceeeeecceEEcC----CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHh
Confidence 4789999999994 567999999999999999999999999999999999999999999999999885 3456677
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcC----CCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhc
Q 000284 526 KGLGVCPQYDILFPELTVREHLEMFAVLKG----VKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIG 601 (1723)
Q Consensus 526 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g----~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~ 601 (1723)
..|++++|+..|+|+|||.||+.++..... +++..+++++.++|+.+|+....++++++||+||||.|+||||+..
T Consensus 83 ~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v~~LsiaqrQ~VeIArAl~~ 162 (500)
T COG1129 83 AGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLVGDLSIAQRQMVEIARALSF 162 (500)
T ss_pred CCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhhhhCCHHHHHHHHHHHHHhc
Confidence 899999999999999999999987765432 5778899999999999999755899999999999999999999999
Q ss_pred CCcEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEE
Q 000284 602 DSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKC 663 (1723)
Q Consensus 602 ~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~ 663 (1723)
+++|||||||||.|++...+.+++++++++ +|.+||++||.|+|+.++||||.||+||+.++
T Consensus 163 ~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~ 225 (500)
T COG1129 163 DARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVG 225 (500)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEee
Confidence 999999999999999999999999999998 69999999999999999999999999999764
No 24
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=5.1e-67 Score=672.89 Aligned_cols=208 Identities=25% Similarity=0.349 Sum_probs=178.2
Q ss_pred cceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHh
Q 000284 1352 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAA 1431 (1723)
Q Consensus 1352 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~ 1431 (1723)
+++++++|+++.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|++++ ++
T Consensus 320 ~~~l~~~~l~~~~~~------~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~~-~~------- 385 (552)
T TIGR03719 320 DKVIEAENLSKGFGD------KLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIKIGE-TV------- 385 (552)
T ss_pred CeEEEEeeEEEEECC------eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEECC-ce-------
Confidence 357999999999953 4699999999999999999999999999999999999999999999843 21
Q ss_pred ccceEEEecCC-CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCcc-ccCCCCCCCChhHHHHHHHHHHHhcC
Q 000284 1432 RRLIGYCPQFD-ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLK-HAKKPSFTLSGGNKRKLSVAIAMIGD 1509 (1723)
Q Consensus 1432 ~~~ig~~pQ~~-~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG~kqrl~iA~al~~~ 1509 (1723)
+|||+||++ .+++.+|+.||+.+.....+.... +..+.++++.+++.+ ..++++.+|||||||||+||+||+.+
T Consensus 386 --~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~--~~~~~~~l~~~~l~~~~~~~~~~~LSgGe~qrv~la~al~~~ 461 (552)
T TIGR03719 386 --KLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKR--EVPSRAYVGRFNFKGSDQQKKVGQLSGGERNRVHLAKTLKSG 461 (552)
T ss_pred --EEEEEeCCccccCCCCcHHHHHHhhccccccCcc--hHHHHHHHHhCCCChhHhcCchhhCCHHHHHHHHHHHHHhhC
Confidence 599999986 478889999999875433333221 223557899999964 57999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEEC-CEEE-EecChhHHHh
Q 000284 1510 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVG-GQLR-CIGSPQHLKT 1582 (1723)
Q Consensus 1510 p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~-G~l~-~~g~~~~l~~ 1582 (1723)
|++|||||||+|||+.+++.+++.|+++. + |||++|||+++++.+||||++|++ |+++ ..|+.++.++
T Consensus 462 p~lllLDEPt~~LD~~~~~~l~~~l~~~~----~-~viivsHd~~~~~~~~d~i~~l~~~~~~~~~~g~~~~~~~ 531 (552)
T TIGR03719 462 GNVLLLDEPTNDLDVETLRALEEALLEFA----G-CAVVISHDRWFLDRIATHILAFEGDSHVEWFEGNYSEYEE 531 (552)
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHCC----C-eEEEEeCCHHHHHHhCCEEEEEECCCeEEEeCCCHHHHHH
Confidence 99999999999999999999999999862 2 799999999999999999999987 5876 5577765543
No 25
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.3e-65 Score=716.38 Aligned_cols=215 Identities=23% Similarity=0.359 Sum_probs=186.9
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHh
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAA 1431 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~ 1431 (1723)
..|+++|++++|+++ .+++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.|+.+ +...+
T Consensus 1236 g~I~f~nVsf~Y~~~----~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~L 1311 (1622)
T PLN03130 1236 GSIKFEDVVLRYRPE----LPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDL 1311 (1622)
T ss_pred CcEEEEEEEEEeCCC----CCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHH
Confidence 459999999999632 3469999999999999999999999999999999999999999999999999987 67789
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCcc-----------ccCCCCCCCChhHHHHH
Q 000284 1432 RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLK-----------HAKKPSFTLSGGNKRKL 1500 (1723)
Q Consensus 1432 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG~kqrl 1500 (1723)
|++||++||++.+|.. |+||||.++. ..+ ++++.++++..++.+ .......+||||||||+
T Consensus 1312 R~~IsiVpQdp~LF~G-TIreNLd~~~---~~t----deei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrl 1383 (1622)
T PLN03130 1312 RKVLGIIPQAPVLFSG-TVRFNLDPFN---EHN----DADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLL 1383 (1622)
T ss_pred HhccEEECCCCccccc-cHHHHhCcCC---CCC----HHHHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHH
Confidence 9999999999999975 9999998642 122 233455555555433 33345568999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000284 1501 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1580 (1723)
Q Consensus 1501 ~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l 1580 (1723)
+|||||+++|+||||||||++||+++.+.+.+.|++.. ++ +|||+++|+++.+.. ||||++|++|++++.|+|++|
T Consensus 1384 aLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~--~~-~TvI~IAHRL~tI~~-~DrIlVLd~G~IvE~Gt~~eL 1459 (1622)
T PLN03130 1384 SLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KS-CTMLIIAHRLNTIID-CDRILVLDAGRVVEFDTPENL 1459 (1622)
T ss_pred HHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC--CC-CEEEEEeCChHHHHh-CCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999863 33 699999999999987 999999999999999999999
Q ss_pred Hhh
Q 000284 1581 KTR 1583 (1723)
Q Consensus 1581 ~~~ 1583 (1723)
.++
T Consensus 1460 l~~ 1462 (1622)
T PLN03130 1460 LSN 1462 (1622)
T ss_pred HhC
Confidence 875
No 26
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.6e-65 Score=714.42 Aligned_cols=217 Identities=23% Similarity=0.327 Sum_probs=187.6
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHh
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAA 1431 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~ 1431 (1723)
..|+++|++++|++ +.+++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.|+.+ +...+
T Consensus 1233 g~I~f~nVsf~Y~~----~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~l 1308 (1495)
T PLN03232 1233 GSIKFEDVHLRYRP----GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDL 1308 (1495)
T ss_pred CcEEEEEEEEEECC----CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHH
Confidence 35999999999953 23569999999999999999999999999999999999999999999999999976 66788
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCcc-----------ccCCCCCCCChhHHHHH
Q 000284 1432 RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLK-----------HAKKPSFTLSGGNKRKL 1500 (1723)
Q Consensus 1432 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG~kqrl 1500 (1723)
|++|+||||++.+|+. |+||||.++. ..++ +++.++++..++.+ .......+||||||||+
T Consensus 1309 R~~i~iVpQdp~LF~g-TIr~NL~~~~---~~sd----eei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl 1380 (1495)
T PLN03232 1309 RRVLSIIPQSPVLFSG-TVRFNIDPFS---EHND----ADLWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLL 1380 (1495)
T ss_pred HhhcEEECCCCeeeCc-cHHHHcCCCC---CCCH----HHHHHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHH
Confidence 9999999999999975 9999998642 2222 33445555555433 33445678999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000284 1501 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1580 (1723)
Q Consensus 1501 ~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l 1580 (1723)
+|||||+++|+||||||||++||+++.+.+.+.|++.. ++ +|||+++|+++.+.. ||||++|++|++++.|++++|
T Consensus 1381 aLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~--~~-~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~Gt~~eL 1456 (1495)
T PLN03232 1381 SLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF--KS-CTMLVIAHRLNTIID-CDKILVLSSGQVLEYDSPQEL 1456 (1495)
T ss_pred HHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc--CC-CEEEEEeCCHHHHHh-CCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999999999999999999999863 33 689999999999987 999999999999999999999
Q ss_pred HhhcC
Q 000284 1581 KTRFG 1585 (1723)
Q Consensus 1581 ~~~~~ 1585 (1723)
.++.+
T Consensus 1457 l~~~~ 1461 (1495)
T PLN03232 1457 LSRDT 1461 (1495)
T ss_pred HhCCC
Confidence 87644
No 27
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=1.6e-66 Score=611.95 Aligned_cols=211 Identities=28% Similarity=0.497 Sum_probs=198.3
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCC--ccHHHHh
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNIT--ADMDEIR 525 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~--~~~~~~r 525 (1723)
..+++++++|.|+ ...|.|||||+|++|||+||||+||||||||++||.|+++||+|+|+++|+.+. .+.+++|
T Consensus 3 ~~l~~~~itK~f~----~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~ 78 (501)
T COG3845 3 PALEMRGITKRFP----GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIR 78 (501)
T ss_pred ceEEEeccEEEcC----CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHH
Confidence 4799999999995 478999999999999999999999999999999999999999999999999875 5678899
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcC
Q 000284 526 KGLGVCPQYDILFPELTVREHLEMFAVL---KGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGD 602 (1723)
Q Consensus 526 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~---~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~ 602 (1723)
..||+|+||+.|++.+||.||+.++..- ..++....+++++++.+..||+-..++++.+||-||||||.|-+||..+
T Consensus 79 ~GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vdp~~~V~dLsVG~qQRVEIlKaLyr~ 158 (501)
T COG3845 79 LGIGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVDPDAKVADLSVGEQQRVEILKALYRG 158 (501)
T ss_pred cCCcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCCccceeecCCcchhHHHHHHHHHhcC
Confidence 9999999999999999999999987643 2356778899999999999999999999999999999999999999999
Q ss_pred CcEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEE
Q 000284 603 SKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLK 662 (1723)
Q Consensus 603 p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~ 662 (1723)
|++|||||||+-|-|...++++++|++++ +|+|||++||.++|+.++|||+.||++|+++
T Consensus 159 a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvv 219 (501)
T COG3845 159 ARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVV 219 (501)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEE
Confidence 99999999999999999999999999997 5999999999999999999999999999964
No 28
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=4.7e-64 Score=702.73 Aligned_cols=217 Identities=21% Similarity=0.304 Sum_probs=187.4
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHh
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAA 1431 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~ 1431 (1723)
..|+++|++++|+++ ...+|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.|+.+ ....+
T Consensus 1283 g~I~f~nVsf~Y~~~----~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~L 1358 (1522)
T TIGR00957 1283 GRVEFRNYCLRYRED----LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDL 1358 (1522)
T ss_pred CcEEEEEEEEEeCCC----CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHHH
Confidence 469999999999642 2469999999999999999999999999999999999999999999999999987 67789
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-----------cccCCCCCCCChhHHHHH
Q 000284 1432 RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-----------KHAKKPSFTLSGGNKRKL 1500 (1723)
Q Consensus 1432 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgG~kqrl 1500 (1723)
|++|||+||++.+|+. |+||||..+. ..++ +++.++++..++. ........+||||||||+
T Consensus 1359 R~~i~iVpQdp~LF~g-TIr~NLdp~~---~~sd----eei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl 1430 (1522)
T TIGR00957 1359 RFKITIIPQDPVLFSG-SLRMNLDPFS---QYSD----EEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLV 1430 (1522)
T ss_pred HhcCeEECCCCcccCc-cHHHHcCccc---CCCH----HHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHH
Confidence 9999999999999985 9999997542 2232 3344555555543 233345567999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000284 1501 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1580 (1723)
Q Consensus 1501 ~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l 1580 (1723)
+|||||+++|+||||||||++||+++.+.|.+.|++.. ++ +|||+++|+++.+.. ||||++|++|++++.|++++|
T Consensus 1431 ~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~--~~-~TvI~IAHRl~ti~~-~DrIlVld~G~IvE~G~~~eL 1506 (1522)
T TIGR00957 1431 CLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF--ED-CTVLTIAHRLNTIMD-YTRVIVLDKGEVAEFGAPSNL 1506 (1522)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc--CC-CEEEEEecCHHHHHh-CCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999999999999999999999863 33 689999999999886 999999999999999999999
Q ss_pred HhhcC
Q 000284 1581 KTRFG 1585 (1723)
Q Consensus 1581 ~~~~~ 1585 (1723)
.++.|
T Consensus 1507 l~~~~ 1511 (1522)
T TIGR00957 1507 LQQRG 1511 (1522)
T ss_pred HhCCC
Confidence 87643
No 29
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-65 Score=665.42 Aligned_cols=204 Identities=21% Similarity=0.385 Sum_probs=177.2
Q ss_pred cceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHh
Q 000284 1352 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAA 1431 (1723)
Q Consensus 1352 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~ 1431 (1723)
+.+|+++||+|.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.+++.
T Consensus 310 ~~~l~~~~l~~~y~~------~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~--------- 374 (638)
T PRK10636 310 NPLLKMEKVSAGYGD------RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG--------- 374 (638)
T ss_pred CceEEEEeeEEEeCC------eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC---------
Confidence 357999999999953 46999999999999999999999999999999999999999999998641
Q ss_pred ccceEEEecCC--CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHHHhc
Q 000284 1432 RRLIGYCPQFD--ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIAMIG 1508 (1723)
Q Consensus 1432 ~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~kqrl~iA~al~~ 1508 (1723)
.++||++|+. .+.+..|+.+++.. .. .....+.+.++|+.+++. +..++++++|||||||||+||++|+.
T Consensus 375 -~~igy~~Q~~~~~l~~~~~~~~~~~~---~~---~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGekqRl~La~~l~~ 447 (638)
T PRK10636 375 -IKLGYFAQHQLEFLRADESPLQHLAR---LA---PQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQ 447 (638)
T ss_pred -EEEEEecCcchhhCCccchHHHHHHH---hC---chhhHHHHHHHHHHcCCChhHhcCchhhCCHHHHHHHHHHHHHhc
Confidence 2599999974 35566788776532 11 122345678899999996 46899999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEE-EecChhHHHh
Q 000284 1509 DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLR-CIGSPQHLKT 1582 (1723)
Q Consensus 1509 ~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~-~~g~~~~l~~ 1582 (1723)
+|+||||||||+|||+.+++.+.++|+++ ++ |||++|||+++++.+||||++|++|+++ +.|+.++...
T Consensus 448 ~p~lLlLDEPt~~LD~~~~~~l~~~L~~~----~g-tvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 448 RPNLLLLDEPTNHLDLDMRQALTEALIDF----EG-ALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQ 517 (638)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHc----CC-eEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHH
Confidence 99999999999999999999999999986 23 8999999999999999999999999997 7899988743
No 30
>KOG0059 consensus Lipid exporter ABCA1 and related proteins, ABC superfamily [Lipid transport and metabolism; General function prediction only]
Probab=100.00 E-value=8.4e-67 Score=695.45 Aligned_cols=564 Identities=30% Similarity=0.460 Sum_probs=416.8
Q ss_pred HHHHHHHHHHHHhHHHHHhhHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHh-hcccccccCchh
Q 000284 174 RVMGVLYLLGFLYPISRLISYSVFEKEQKIREGLYMMGLKDGIFHLSWFITYAAQFAVSSGIITACT-MDSLFKYSDKTV 252 (1723)
Q Consensus 174 ~~~~~~~~l~~~~~~~~~v~~iV~EKe~~lke~m~~mGl~~~~~wlsw~i~~~~~~~i~~~ii~~~~-~~~~~~~s~~~~ 252 (1723)
...++++++.+++..+..+...|.||+.|.|+.|+++|+++++||++|++..++.+++..+++..+. ....+...+..+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~li~e~~~~~~~~~~i~G~~~~~yw~~~~~~d~~~~~l~~~~~~~~~~~f~~~~~~~~~~ 377 (885)
T KOG0059|consen 298 LLGALFLLFVFLLLFSVFLLSLILERQQRLRHQQLIAGLSPSTYWLFALVWDLLLYLLILLILLIFVLIFGFFAGNNTVI 377 (885)
T ss_pred HHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccchHH
Confidence 3456666666777777778889999999999999999999999999999988877766654433322 112455567788
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHH----Hhhhhhc-cCCCchhHHhHHHhhhchhHHHHHHHHH
Q 000284 253 VFTYFFSFGLSAITLSFFISTFFARAKTAVAVGTLSFLGA----FFPYYTV-NDEAVPMVLKVIASLLSPTAFALGSVNF 327 (1723)
Q Consensus 253 ~f~~~~l~~~s~i~~~~~iS~fF~~~~~a~~~~~l~~~~~----~~p~~~~-~~~~~~~~~~~~~~l~~~~~~~~g~~~~ 327 (1723)
+++++++|+.+.+.+.|++|.+|++...|.....+..++. +++.... .....+....+...+.|+..+..+...+
T Consensus 378 ~~~~~~l~~~s~i~l~y~~s~~f~~~~~~~v~~~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~l 457 (885)
T KOG0059|consen 378 ILLLLLLYIRSAIPLTYILSFIFSKESTASVILSIYNLISGLLVFFAVFILQSFANGRTGDIFSMILVPGFTLFLPLYEL 457 (885)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcCceeehhhHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHhhhHHHHHHHHHH
Confidence 9999999999999999999999999998877655443322 2222211 1112222222333334443333222222
Q ss_pred HH--Hh---hcccCccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHhhccccCCCCccccccccccccccCcccccc
Q 000284 328 AD--YE---RAHVGLRWSNMWRASSGVNFLVCLLMMLLDTLLYGVIGLYLDKVLPKENGVRYRWNFIFQNCFRRKKSVIK 402 (1723)
Q Consensus 328 ~~--~e---~~~~g~~~~~~~~~~~~~~~~~~~~~l~~d~~ly~~l~~yld~v~p~~~G~~~p~~f~~~~~~w~~~~~~~ 402 (1723)
.. .+ ....|..|.+........... +.+.+...+.+.+.+...|+..|.+|....++|.++....
T Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~ 527 (885)
T KOG0059|consen 458 SSLAAEGNLNLNDGMSLEVLGNDESFYTLL----------LEWLLPLIGRRYLALVTEGVKDDLFFLLIFVPFKRRMRAL 527 (885)
T ss_pred HHHHHHhhhcchhhhhhhhhcccccccchh----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccc
Confidence 11 11 123455666543321000000 0011111111112222344445554444444443322100
Q ss_pred --cccchhhHHhhhhhhhhhhhhhhcccCchhhhhhhhcccccccCcceEEEEeEEEEecCcCCccceeeeeeEEEeCCc
Q 000284 403 --HHVSSAEVKINKKLSKEKECAFALDACEPVVEAISLDMKQQEVDGRCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQ 480 (1723)
Q Consensus 403 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Ge 480 (1723)
+... . ......++..+..+.. .++. ..........+.++||+|.|+.+.+ |++++|+.|++||
T Consensus 528 ~~~~~~-~----~~~~~~e~~~v~~e~~---~v~~----~~~~~~~~~~~~~~~L~k~y~~~~~---Av~~ls~~V~~ge 592 (885)
T KOG0059|consen 528 TQNMLK-G----FEPVEVEKLDVARERN---RVET----LLFRSSYSSALVLNNLSKVYGGKDG---AVRGLSFAVPPGE 592 (885)
T ss_pred cccccC-C----CcCcchhhHHHHHHHH---hhhh----hhhcccccceEEEcceeeeecchhh---hhcceEEEecCCc
Confidence 0000 0 0000001100000000 0000 1111122357999999999976432 9999999999999
Q ss_pred EEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc--cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCH
Q 000284 481 ILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA--DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKE 558 (1723)
Q Consensus 481 i~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~--~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~ 558 (1723)
|+|++|+|||||||+++||+|..+||+|+++++|+++.. +.+++++.||||||++.+|+.||.+||+.++++++|+++
T Consensus 593 cfgLLG~NGAGKtT~f~mltG~~~~t~G~a~i~g~~i~~~~~~~~~~~~iGyCPQ~d~l~~~lT~rEhL~~~arlrG~~~ 672 (885)
T KOG0059|consen 593 CFGLLGVNGAGKTTTFKMLTGETKPTSGEALIKGHDITVSTDFQQVRKQLGYCPQFDALWEELTGREHLEFYARLRGLPR 672 (885)
T ss_pred eEEEecCCCCCchhhHHHHhCCccCCcceEEEecCccccccchhhhhhhcccCCchhhhhhhccHHHHHHHHHHHcCCCh
Confidence 999999999999999999999999999999999999976 555699999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhC-CcEEE
Q 000284 559 ELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKK-GRIIL 637 (1723)
Q Consensus 559 ~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~-~~tii 637 (1723)
.++++.++++++.+||.+..+++++.+||||||||++|+|++++|++++|||||+||||.+||.+|+++++.++ |+.||
T Consensus 673 ~di~~~v~~ll~~~~L~~~~~~~~~~ySgG~kRkLs~aialig~p~vi~LDEPstGmDP~arr~lW~ii~~~~k~g~aii 752 (885)
T KOG0059|consen 673 SDIGSAIEKLLRLVGLGPYANKQVRTYSGGNKRRLSFAIALIGDPSVILLDEPSTGLDPKARRHLWDIIARLRKNGKAII 752 (885)
T ss_pred hHHHHHHHHHHHHcCChhhhccchhhCCCcchhhHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHhcCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999976 56999
Q ss_pred EEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhhhCCcEEEEEEecC-CChhhHHHHHHhhCCCceEEeeeCcEEEEE
Q 000284 638 LTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGVGYTLTLVKSA-PDASAAADIVYRHIPSALCVSEVGTEITFK 716 (1723)
Q Consensus 638 l~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~g~gy~l~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 716 (1723)
+|||.|+||+.+|||++||.+|+++|.|++++||++||.||.+++.... ++.+.+.+.+++.+|++...+.....+.|.
T Consensus 753 LTSHsMeE~EaLCtR~aImv~G~l~ciGs~q~LKsrfG~gy~l~~~~~~~~~~~~v~~~~~~~~p~a~~~~~~~~~~~~~ 832 (885)
T KOG0059|consen 753 LTSHSMEEAEALCTRTAIMVIGQLRCIGSPQELKSRYGSGYTLTVRIKELPEVSEVEKLLQNRFPGAVLKERHAGLLAFE 832 (885)
T ss_pred EEcCCHHHHHHHhhhhheeecCeeEEecChHHHHhhcCCcEEEEEEECCCcccchHHHHHHHhCCCcchhhhhhceEEEE
Confidence 9999999999999999999999999999999999999999999987665 333577888999999999998888889999
Q ss_pred ecCCCcchHHHHHHHHHHhhhhccccccccccccccCCCeeEEEecCCCHHHHHHHHhcCC
Q 000284 717 LPLASSSSFESMFREIESCIRKSVSKVEADATEDTDYLGIESFGISVTTLEEVFLRVAGCN 777 (1723)
Q Consensus 717 lp~~~~~~~~~l~~~le~~~~~~~~~~~~~~~~~~~~~~i~~~~is~ttLEevfl~~~~~~ 777 (1723)
+|.+......+.|..+|... ..+++.+|+++++||||||++++...
T Consensus 833 ip~~~~~~~~~vF~~le~~~---------------~~~~i~dyslsq~tLe~VFi~~a~~q 878 (885)
T KOG0059|consen 833 IPKDEVVSLSEVFLALEKAK---------------ESFGIEDYSLSQTTLEDVFLILAKTQ 878 (885)
T ss_pred cccchhhHHHHHHHHHHHHH---------------HhcCHHHHHHHHhhHHHHHHHHhccc
Confidence 99988888888999998753 47899999999999999999998754
No 31
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=1.4e-65 Score=655.88 Aligned_cols=198 Identities=22% Similarity=0.278 Sum_probs=174.7
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1432 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~ 1432 (1723)
++++++|++|.|++ . .|+++||+|++||++||+||||||||||+|+|+|+++|++|+|.++
T Consensus 339 ~~l~~~~ls~~~~~------~-~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~------------ 399 (590)
T PRK13409 339 TLVEYPDLTKKLGD------F-SLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE------------ 399 (590)
T ss_pred eEEEEcceEEEECC------E-EEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe------------
Confidence 46899999999952 2 4999999999999999999999999999999999999999999885
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCE
Q 000284 1433 RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPI 1512 (1723)
Q Consensus 1433 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~v 1512 (1723)
.+|||+||+..+++.+||+|++.+..... .. ...+.++++.++|.+..++++.+|||||||||+||+||+.+|++
T Consensus 400 ~~i~y~~Q~~~~~~~~tv~e~l~~~~~~~--~~---~~~~~~~L~~l~l~~~~~~~~~~LSGGe~QRvaiAraL~~~p~l 474 (590)
T PRK13409 400 LKISYKPQYIKPDYDGTVEDLLRSITDDL--GS---SYYKSEIIKPLQLERLLDKNVKDLSGGELQRVAIAACLSRDADL 474 (590)
T ss_pred eeEEEecccccCCCCCcHHHHHHHHhhhc--Ch---HHHHHHHHHHCCCHHHHhCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 14999999988888899999998643221 11 23467889999999889999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecC
Q 000284 1513 VILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGS 1576 (1723)
Q Consensus 1513 llLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~ 1576 (1723)
|||||||+|||+.+++.++++|++++++.| +|||++|||++++..+|||+++|+ |++...|+
T Consensus 475 lLLDEPt~~LD~~~~~~l~~~l~~l~~~~g-~tviivsHD~~~~~~~aDrvivl~-~~~~~~g~ 536 (590)
T PRK13409 475 YLLDEPSAHLDVEQRLAVAKAIRRIAEERE-ATALVVDHDIYMIDYISDRLMVFE-GEPGKHGH 536 (590)
T ss_pred EEEeCCccCCCHHHHHHHHHHHHHHHHhCC-CEEEEEeCCHHHHHHhCCEEEEEc-Ccceeeee
Confidence 999999999999999999999999975444 589999999999999999999996 57776654
No 32
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=7.3e-64 Score=651.79 Aligned_cols=206 Identities=25% Similarity=0.350 Sum_probs=177.8
Q ss_pred cceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHh
Q 000284 1352 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAA 1431 (1723)
Q Consensus 1352 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~ 1431 (1723)
+.+|+++||+|.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.+ |.++
T Consensus 317 ~~~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~------- 382 (635)
T PRK11147 317 KIVFEMENVNYQIDG------KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL------- 382 (635)
T ss_pred CceEEEeeeEEEECC------eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc-------
Confidence 357999999999953 46999999999999999999999999999999999999999999998 5432
Q ss_pred ccceEEEecCC-CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHHHhcC
Q 000284 1432 RRLIGYCPQFD-ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIAMIGD 1509 (1723)
Q Consensus 1432 ~~~ig~~pQ~~-~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~kqrl~iA~al~~~ 1509 (1723)
+|||++|+. .+++.+||.||+.+........ .....+.++++.+++. +..++++++|||||||||+||+||+.+
T Consensus 383 --~i~y~~q~~~~l~~~~tv~e~l~~~~~~~~~~--~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGekqRl~la~al~~~ 458 (635)
T PRK11147 383 --EVAYFDQHRAELDPEKTVMDNLAEGKQEVMVN--GRPRHVLGYLQDFLFHPKRAMTPVKALSGGERNRLLLARLFLKP 458 (635)
T ss_pred --EEEEEeCcccccCCCCCHHHHHHhhccccccc--chHHHHHHHHHhcCCCHHHHhChhhhCCHHHHHHHHHHHHHhcC
Confidence 499999985 6888999999997643211111 1234577889999996 568999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEE-CCEEEE-ecChhHH
Q 000284 1510 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMV-GGQLRC-IGSPQHL 1580 (1723)
Q Consensus 1510 p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~-~G~l~~-~g~~~~l 1580 (1723)
|++|||||||+|||+.+++.+.++|+++ + .|||++|||++++..+|||+++|+ +|++.. .|+.++.
T Consensus 459 p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~-~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y 526 (635)
T PRK11147 459 SNLLILDEPTNDLDVETLELLEELLDSY----Q-GTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDA 526 (635)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHhC----C-CeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHH
Confidence 9999999999999999999999999875 2 389999999999999999999998 899875 5777665
No 33
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=6.8e-62 Score=678.55 Aligned_cols=215 Identities=20% Similarity=0.328 Sum_probs=186.4
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHh
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAA 1431 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~ 1431 (1723)
..|+++||+++|+++ .+.+|+||||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.|+.+ +...+
T Consensus 1307 G~I~f~nVsf~Y~~~----~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~L 1382 (1560)
T PTZ00243 1307 GSLVFEGVQMRYREG----LPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLREL 1382 (1560)
T ss_pred CeEEEEEEEEEeCCC----CCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHH
Confidence 359999999999642 3469999999999999999999999999999999999999999999999999987 66788
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCcccc-----------CCCCCCCChhHHHHH
Q 000284 1432 RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHA-----------KKPSFTLSGGNKRKL 1500 (1723)
Q Consensus 1432 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~kqrl 1500 (1723)
|++|||+||++.||+. |+||||..+. ..+ ++++.++++..++.+.. .....+||||||||+
T Consensus 1383 R~~I~iVpQdp~LF~g-TIreNIdp~~---~~s----deeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrL 1454 (1560)
T PTZ00243 1383 RRQFSMIPQDPVLFDG-TVRQNVDPFL---EAS----SAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLM 1454 (1560)
T ss_pred HhcceEECCCCccccc-cHHHHhCccc---CCC----HHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHH
Confidence 9999999999999975 9999997532 122 24566677777665432 234468999999999
Q ss_pred HHHHHHhcC-CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000284 1501 SVAIAMIGD-PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1579 (1723)
Q Consensus 1501 ~iA~al~~~-p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~ 1579 (1723)
+|||||+++ |+||||||||++||+++.+.+.+.|++.. ++ +|||+++|+++.+.. ||||++|++|++++.|++++
T Consensus 1455 aLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~--~~-~TvI~IAHRl~ti~~-~DrIlVLd~G~VvE~Gt~~e 1530 (1560)
T PTZ00243 1455 CMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF--SA-YTVITIAHRLHTVAQ-YDKIIVMDHGAVAEMGSPRE 1530 (1560)
T ss_pred HHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC--CC-CEEEEEeccHHHHHh-CCEEEEEECCEEEEECCHHH
Confidence 999999995 89999999999999999999999999863 23 689999999998876 99999999999999999999
Q ss_pred HHhh
Q 000284 1580 LKTR 1583 (1723)
Q Consensus 1580 l~~~ 1583 (1723)
|.++
T Consensus 1531 Ll~~ 1534 (1560)
T PTZ00243 1531 LVMN 1534 (1560)
T ss_pred HHhC
Confidence 9864
No 34
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1e-60 Score=667.08 Aligned_cols=215 Identities=25% Similarity=0.407 Sum_probs=186.1
Q ss_pred cceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHH
Q 000284 1352 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKA 1430 (1723)
Q Consensus 1352 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~ 1430 (1723)
...|+++||+++|+. +.+.+|+|+||+|++||.+||+|++|||||||+++|.|+++ ++|+|.|||.|+.. ....
T Consensus 1215 ~g~I~f~nVs~~Y~~----~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~ 1289 (1490)
T TIGR01271 1215 GGQMDVQGLTAKYTE----AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQT 1289 (1490)
T ss_pred CCeEEEEEEEEEeCC----CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHH
Confidence 346999999999964 23579999999999999999999999999999999999997 89999999999977 5677
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccC-----------CCCCCCChhHHHH
Q 000284 1431 ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAK-----------KPSFTLSGGNKRK 1499 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~kqr 1499 (1723)
+|++|+|+||++.+|+. |+||||..+. ..+ ++++.++++..+|.+... .....||||||||
T Consensus 1290 lR~~is~IpQdp~LF~G-TIR~NLdp~~---~~t----deei~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQr 1361 (1490)
T TIGR01271 1290 WRKAFGVIPQKVFIFSG-TFRKNLDPYE---QWS----DEEIWKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQL 1361 (1490)
T ss_pred HHhceEEEeCCCccCcc-CHHHHhCccc---CCC----HHHHHHHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHH
Confidence 89999999999999985 9999997542 112 345666777777654322 2334799999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000284 1500 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1579 (1723)
Q Consensus 1500 l~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~ 1579 (1723)
++|||||+++|+||||||||++||+.+.+.|.+.|++.. + ++|||++||+++.+.. ||||++|++|++++.|+|++
T Consensus 1362 L~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~--~-~~TvI~IaHRl~ti~~-~DrIlvL~~G~ivE~g~p~~ 1437 (1490)
T TIGR01271 1362 MCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF--S-NCTVILSEHRVEALLE-CQQFLVIEGSSVKQYDSIQK 1437 (1490)
T ss_pred HHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc--C-CCEEEEEecCHHHHHh-CCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999999863 2 3699999999999886 99999999999999999999
Q ss_pred HHhh
Q 000284 1580 LKTR 1583 (1723)
Q Consensus 1580 l~~~ 1583 (1723)
|.++
T Consensus 1438 Ll~~ 1441 (1490)
T TIGR01271 1438 LLNE 1441 (1490)
T ss_pred HHcC
Confidence 9864
No 35
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=3.1e-62 Score=634.93 Aligned_cols=204 Identities=27% Similarity=0.440 Sum_probs=173.3
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1432 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~ 1432 (1723)
++|+++|+++.|++ .+.+++|+||+|++||++||+||||||||||+|+|+|+++|++|+|.+++ +
T Consensus 507 ~~L~~~~ls~~y~~-----~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~----------~ 571 (718)
T PLN03073 507 PIISFSDASFGYPG-----GPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA----------K 571 (718)
T ss_pred ceEEEEeeEEEeCC-----CCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC----------c
Confidence 47999999999953 24589999999999999999999999999999999999999999999865 2
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHH-HH-HcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHHHhcC
Q 000284 1433 RLIGYCPQFDALLEYLTVQEHLELY-AR-IKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIAMIGD 1509 (1723)
Q Consensus 1433 ~~ig~~pQ~~~l~~~lTv~e~l~~~-~~-~~g~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~kqrl~iA~al~~~ 1509 (1723)
.+|||+||+. .+.+++.++..+. .. ..+.. ++.+.++|+.+++. +..++++.+|||||||||+||+||+.+
T Consensus 572 ~~igyv~Q~~--~~~l~~~~~~~~~~~~~~~~~~----~~~i~~~L~~~gl~~~~~~~~~~~LSgGqkqRvaLAraL~~~ 645 (718)
T PLN03073 572 VRMAVFSQHH--VDGLDLSSNPLLYMMRCFPGVP----EQKLRAHLGSFGVTGNLALQPMYTLSGGQKSRVAFAKITFKK 645 (718)
T ss_pred eeEEEEeccc--cccCCcchhHHHHHHHhcCCCC----HHHHHHHHHHCCCChHHhcCCccccCHHHHHHHHHHHHHhcC
Confidence 3699999985 2345666664332 22 12222 34677899999997 468899999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEE-EecChhHHHh
Q 000284 1510 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLR-CIGSPQHLKT 1582 (1723)
Q Consensus 1510 p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~-~~g~~~~l~~ 1582 (1723)
|++|||||||+|||+.+++.+.+.|.++ + + |||++|||++++..+|||+++|.+|+++ ..|++++.++
T Consensus 646 p~lLLLDEPT~~LD~~s~~~l~~~L~~~---~-g-tvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~~~ 714 (718)
T PLN03073 646 PHILLLDEPSNHLDLDAVEALIQGLVLF---Q-G-GVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDYKK 714 (718)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHc---C-C-EEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHHH
Confidence 9999999999999999999999888764 2 3 8999999999999999999999999998 6788877654
No 36
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.9e-61 Score=632.50 Aligned_cols=226 Identities=22% Similarity=0.340 Sum_probs=195.0
Q ss_pred cccCCCCcceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeC
Q 000284 1345 VLSGSVDNAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDI 1424 (1723)
Q Consensus 1345 v~~~~~~~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i 1424 (1723)
.+.+++.+..|+++|++.+|.. +...+|+||||+|++||.+||+|+.|||||||+++|-++.+|++|+|.|||.|+
T Consensus 1129 pp~~WP~~G~I~f~~~~~RYrp----~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI 1204 (1381)
T KOG0054|consen 1129 PPPSWPSKGEIEFEDLSLRYRP----NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDI 1204 (1381)
T ss_pred CCCCCCCCCeEEEEEeEEEeCC----CCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeec
Confidence 4455677778999999999964 346799999999999999999999999999999999999999999999999999
Q ss_pred CC-ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-----------cccCCCCCCC
Q 000284 1425 RS-DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-----------KHAKKPSFTL 1492 (1723)
Q Consensus 1425 ~~-~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~L 1492 (1723)
.+ ....+|++++.+||||.||.. |+|.||.-+... + ++.+-++|++.+|. .....-..++
T Consensus 1205 ~~igL~dLRsrlsIIPQdPvLFsG-TvR~NLDPf~e~---s----D~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~ 1276 (1381)
T KOG0054|consen 1205 SKIGLHDLRSRLSIIPQDPVLFSG-TVRFNLDPFDEY---S----DDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENF 1276 (1381)
T ss_pred ccccHHHHHhcCeeeCCCCceecC-ccccccCccccc---C----HHHHHHHHHHhChHHHHhhCCcCCCceecCCCccC
Confidence 87 678899999999999999975 999999876543 1 22334445554443 3333445789
Q ss_pred ChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEE
Q 000284 1493 SGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLR 1572 (1723)
Q Consensus 1493 SgG~kqrl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~ 1572 (1723)
|-||||-|||||||+++++||+|||+|+++|+++-..|.+.|++-= .++|||.+.|+++.+.. ||||+||++|+++
T Consensus 1277 SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F---~dcTVltIAHRl~TVmd-~DrVlVld~G~v~ 1352 (1381)
T KOG0054|consen 1277 SVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEF---KDCTVLTIAHRLNTVMD-SDRVLVLDAGRVV 1352 (1381)
T ss_pred ChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHh---cCCeEEEEeeccchhhh-cCeEEEeeCCeEe
Confidence 9999999999999999999999999999999999999999999842 34799999999999998 9999999999999
Q ss_pred EecChhHHHhhcCC
Q 000284 1573 CIGSPQHLKTRFGN 1586 (1723)
Q Consensus 1573 ~~g~~~~l~~~~~~ 1586 (1723)
+.|+|++|.++.+.
T Consensus 1353 EfdsP~~Ll~~~~S 1366 (1381)
T KOG0054|consen 1353 EFDSPAELLSDKDS 1366 (1381)
T ss_pred ecCChHHHHhCCcc
Confidence 99999999876443
No 37
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=2.5e-62 Score=608.79 Aligned_cols=205 Identities=27% Similarity=0.407 Sum_probs=176.3
Q ss_pred CcceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHH
Q 000284 1351 DNAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKA 1430 (1723)
Q Consensus 1351 ~~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~ 1430 (1723)
++.+++++|++|.|++ .+.+++++||.|.+|+.+||+||||+|||||+|+|+|...|.+|+|.+.- .
T Consensus 318 g~~vl~~~~~~~~y~~-----~~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~~g~-~------- 384 (530)
T COG0488 318 GKLVLEFENVSKGYDG-----GRLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTVKVGE-T------- 384 (530)
T ss_pred CCeeEEEeccccccCC-----CceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCceEEeCC-c-------
Confidence 3568999999999964 25799999999999999999999999999999999999999999987732 1
Q ss_pred hccceEEEecCC-CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHHHhc
Q 000284 1431 ARRLIGYCPQFD-ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIAMIG 1508 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~-~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~kqrl~iA~al~~ 1508 (1723)
-+|||.+|+. .+.++.|+.|++.-.. +. ..+..++..|.+|++. +...++++.||||||.||.+|+.++.
T Consensus 385 --v~igyf~Q~~~~l~~~~t~~d~l~~~~-----~~-~~e~~~r~~L~~f~F~~~~~~~~v~~LSGGEk~Rl~La~ll~~ 456 (530)
T COG0488 385 --VKIGYFDQHRDELDPDKTVLEELSEGF-----PD-GDEQEVRAYLGRFGFTGEDQEKPVGVLSGGEKARLLLAKLLLQ 456 (530)
T ss_pred --eEEEEEEehhhhcCccCcHHHHHHhhC-----cc-ccHHHHHHHHHHcCCChHHHhCchhhcCHhHHHHHHHHHHhcc
Confidence 2499999985 4557779999886432 11 1156788899999996 56789999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEe-cChhHHHh
Q 000284 1509 DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCI-GSPQHLKT 1582 (1723)
Q Consensus 1509 ~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~-g~~~~l~~ 1582 (1723)
+|++|||||||++||..+++.+.++|.++. | |||+||||.++++++|++++++.+ ++... |+.++...
T Consensus 457 ~pNvLiLDEPTNhLDi~s~~aLe~aL~~f~---G--tvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g~y~~y~~ 525 (530)
T COG0488 457 PPNLLLLDEPTNHLDIESLEALEEALLDFE---G--TVLLVSHDRYFLDRVATRIWLVED-KVEEFEGGYEDYLE 525 (530)
T ss_pred CCCEEEEcCCCccCCHHHHHHHHHHHHhCC---C--eEEEEeCCHHHHHhhcceEEEEcC-ceeEcCCCHHHHHH
Confidence 999999999999999999999999999872 3 799999999999999999999998 66554 77766554
No 38
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=9e-55 Score=557.81 Aligned_cols=816 Identities=20% Similarity=0.283 Sum_probs=494.8
Q ss_pred ccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCC---CcceEEEccccCCccHHHHhcceEEEccCCCCCCCC
Q 000284 465 NCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP---TTGDALVFGKNITADMDEIRKGLGVCPQYDILFPEL 541 (1723)
Q Consensus 465 ~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p---~~G~i~i~g~~i~~~~~~~r~~ig~~~Q~~~l~~~l 541 (1723)
...+++|+|.-+++|+.+.++||.|||||||++.|+|-++- ..|+|..+|++...... ++.++|++|+++.+++|
T Consensus 127 ~~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~--~~~~aY~~e~DvH~p~l 204 (1391)
T KOG0065|consen 127 KIQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVP--KKTVAYNSEQDVHFPEL 204 (1391)
T ss_pred cceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCccccccc--CceEEecccccccccee
Confidence 35799999999999999999999999999999999998764 35799999998765443 78899999999999999
Q ss_pred CHHHHHHHHHHhcCC-------CHHH-HHHHHHHHHHHcCCCcccccccC-----CCChhHHHHHHHHHHHhcCCcEeec
Q 000284 542 TVREHLEMFAVLKGV-------KEEL-LESVVAEMVDEVGLADKVNIVVR-----ALSGGMKRKLSLGIALIGDSKVVIL 608 (1723)
Q Consensus 542 Tv~e~l~~~~~~~g~-------~~~~-~~~~v~~~l~~~~l~~~~~~~~~-----~LSgGqkqrl~lA~al~~~p~vliL 608 (1723)
||+|.|.|.++.++. ++.+ ..+..+.+++.+||.+..|..++ ..|||||+||++|-+++++++++++
T Consensus 205 TVreTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~ 284 (1391)
T KOG0065|consen 205 TVRETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFW 284 (1391)
T ss_pred EEeehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeee
Confidence 999999999998864 1222 11256789999999988777664 6999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCH-HHHHhhcCEEEEEeCCEEEEecCHHHHHhhhC-CcEEEEEEe
Q 000284 609 DEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSM-DEAEELGDRIAIMANGSLKCCGSSLFLKHQYG-VGYTLTLVK 684 (1723)
Q Consensus 609 DEPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~-~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~g-~gy~l~~~~ 684 (1723)
||+|.|||..+.-++.+.|+++.+ +.|.+++-|.. +++-.+-|.|.+|.+|+++.+|+.++.+.-|- .||+ +
T Consensus 285 De~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~--c-- 360 (1391)
T KOG0065|consen 285 DEITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFK--C-- 360 (1391)
T ss_pred ecccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCcc--C--
Confidence 999999999999999999999853 77888777776 78888999999999999999999998887653 3553 1
Q ss_pred cCCChhhHHHHHHhhCCCceEEeeeCcEEEEEecCCCcchHHHHHHHHHHhhhhccccccccccccccCCCeeEEEecCC
Q 000284 685 SAPDASAAADIVYRHIPSALCVSEVGTEITFKLPLASSSSFESMFREIESCIRKSVSKVEADATEDTDYLGIESFGISVT 764 (1723)
Q Consensus 685 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~lp~~~~~~~~~l~~~le~~~~~~~~~~~~~~~~~~~~~~i~~~~is~t 764 (1723)
+......+++.+- ..-+...+...+-.-..|......+.+.+...+.
T Consensus 361 --P~r~~~ADfLt~v-ts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~------------------------------ 407 (1391)
T KOG0065|consen 361 --PPRKGTADFLTEV-TSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSED------------------------------ 407 (1391)
T ss_pred --CCccCHHHHHHHh-hcCccccccccccCCCcccCCHHHHHHHHhcchh------------------------------
Confidence 1111222332221 1100000000000000111111112222211111
Q ss_pred CHHHHHHHHhcCCCcchhhhhhccccccccccccccCCCCccccccccccCCcccccceeeeeecchhhhhhHHhhhhhh
Q 000284 765 TLEEVFLRVAGCNLDESECISQRNNLVTLDYVSAESDDQAPKRISNCKLFGNYKWVFGFIVTVVQRACTLIVAAVLGFLN 844 (1723)
Q Consensus 765 tLEevfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (1723)
+.++...- +.+.++... .+ ++.
T Consensus 408 -----~~~l~~~l-------------------~~~~~~~k~-----~~-----------------~al------------ 429 (1391)
T KOG0065|consen 408 -----YAKLKKEL-------------------SKPYDKSKK-----HK-----------------AAL------------ 429 (1391)
T ss_pred -----hHHHHHHh-------------------cchhhhhhc-----cc-----------------hhh------------
Confidence 00000000 000000000 00 000
Q ss_pred hhcccccccccccchhHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH-HHHhccCCCCCCccccccccCCccc
Q 000284 845 FLIKKCCTCCIISRSMFWQHCKALFIKRAVSARRDRKTIVFQLLIPAIFLLVGL-LFLKLKPHPDMLSVTFTTSNFNPLL 923 (1723)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~q~~all~KR~~~~~R~~~~~~~~lllP~~~~~~~l-~~~~~~~~~~~~~~~l~~~~~~~~~ 923 (1723)
+...-...+|.|+++.+++-++..+||...++++.+-+++..++.. ++.+.. . .++.
T Consensus 430 --------~s~~y~v~~~~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~-~-------~t~~------ 487 (1391)
T KOG0065|consen 430 --------VSSKYSVPYWEQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTP-M-------STTS------ 487 (1391)
T ss_pred --------cCCceeccHHHHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeecc-C-------cccc------
Confidence 0000123579999999999999999999988887776655433221 111100 0 0000
Q ss_pred CCCCCCCCcccccCchhhhhhhhhhccCcccccccCCCCCCChHHHHHHHHHhcCCCCccchhchhHHHHHhhhhccccc
Q 000284 924 SGGGGGGPIPFDLSWPIANEVSKYIQGGWIQRFKQSSYRFPNAEKALADAVDAAGPTLGPVLLSMSEYLMSSFNESYQSR 1003 (1723)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 1003 (1723)
+.
T Consensus 488 --------------------------~~---------------------------------------------------- 489 (1391)
T KOG0065|consen 488 --------------------------GG---------------------------------------------------- 489 (1391)
T ss_pred --------------------------cc----------------------------------------------------
Confidence 00
Q ss_pred ccEEEeeccCCCCceeEEEEeCCcCCChHHHHHHHHHHHHHHHhcCCCcceEEEEeecCCcchhhhhhhchhhhhHHHHH
Q 000284 1004 YGAIVMDDQNDDGSLGFTVLHNSSCQHAGPTFINVMNTAILRLATGNRNMTIRTRNHPLPTTQSQQLQRHDLDAFSVSII 1083 (1723)
Q Consensus 1004 ~g~~~~~~~~~~~~~~~~~~~N~~~~hs~p~~ln~l~nailr~~~~~~~~~I~~~n~Plp~~~~~~~~~~~~~~~~~~i~ 1083 (1723)
| ..++..+..+ .++
T Consensus 490 ---------------------~---~~~~~lffsl------------------------------------------l~~ 503 (1391)
T KOG0065|consen 490 ---------------------Y---SRGGALFFAL------------------------------------------LFN 503 (1391)
T ss_pred ---------------------h---hhhhHHHHHH------------------------------------------HHH
Confidence 0 0000000000 011
Q ss_pred HHHHHHHhhhHhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhccccccccchHHHH
Q 000284 1084 ISIAFSFIPASFAVAIVKEREVKAKQQQLISGVSVLSYWTSTYIWDFISFLFPSSCA-IILFYIFGLDQFVGRGCLLPTV 1162 (1723)
Q Consensus 1084 i~~~~s~i~a~f~~~~V~ER~~k~k~lq~vsGv~~~~YW~s~~i~D~i~~li~~~~~-iii~~~f~~~~~~~~~~~~~~~ 1162 (1723)
...+++=++..|.-.+|.+|+. -.+=..|++|=++..+.|+..-++.+.+. +++++..+... ..+.++..+
T Consensus 504 ~f~~laEi~~~~~~~pv~~Khr------~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~--~A~rFF~~f 575 (1391)
T KOG0065|consen 504 LFNGLAEIALTFQRLPVFYKHR------DLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKR--NAGRFFIQF 575 (1391)
T ss_pred HHHhHHHHHHHHhhcchHHHhh------cccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCc--chHHHHHHH
Confidence 1111222222333333333322 12335789999999999988766555443 44444444321 223345555
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhhHHH
Q 000284 1163 LIFLGYGLAIASSTYCLTFFFSDHTMAQNVVLLVHFFTGLILMVISFIMGLLEATRSANSLLKNFFRLSPGFCFADGLAS 1242 (1723)
Q Consensus 1163 lllllyG~a~i~~~Yl~Sf~F~~~~~a~~~~~~~~~~~g~~~~i~~~il~~~~~~~~~~~~l~~~f~l~P~~~l~~gl~~ 1242 (1723)
++++++-.++..+.=+++-+..+...| +.+.|+...++...-+..-+..+....++|+..+.|.---..+++.
T Consensus 576 L~lf~~~~~~s~lFr~ia~l~~t~~~A-------n~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~ 648 (1391)
T KOG0065|consen 576 LFLFLCQFCMSGLFRFIASLSRTLSIA-------NLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMS 648 (1391)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchHHHH-------hhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHH
Confidence 555555555444444444333333322 2222222222221112111223334456677777774222223322
Q ss_pred HHHHhh----c------------ccCC----------------C------CCCccccccchhhHHHHHHHHHHHHHHHHH
Q 000284 1243 LALLRQ----G------------MKDK----------------T------SDGVFDWNVTSASICYLGCESICYFLLTLG 1284 (1723)
Q Consensus 1243 l~~~~~----~------------~~~~----------------~------~~~~~~~~~~g~~i~~l~~~~i~~~ll~l~ 1284 (1723)
-..... . ...+ . ....+-|...|+.++|.+.-.+++.+++-+
T Consensus 649 NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~y 728 (1391)
T KOG0065|consen 649 NEFHGRRWPCSPSGPAYDNISIENKVCAATGATLGNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEY 728 (1391)
T ss_pred hhhhcccCCCCCCCCcccccccccccchhhccccCceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHh
Confidence 111100 0 0000 0 012234555566666665444444333322
Q ss_pred HHhccccchhhhHHhhhhccccccccCCCCCCCcccccCCCCCCcCCCCcchhhHHHhhhcc----cCCCCcceEEEEeE
Q 000284 1285 LELLPSHKWTLMTIKEWWKGTRHRLCNTPSSYLEPLLQSSSESDTLDLNEDIDVQVERNRVL----SGSVDNAIIYLRNL 1360 (1723)
Q Consensus 1285 le~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eD~dV~~Er~rv~----~~~~~~~~l~v~~l 1360 (1723)
+.. ....... . .+++.+... .+........ .+..+|...+.++..+. .....+.+...+|+
T Consensus 729 l~p--~~~~~~~--l-~~~~~~~~~--------~~~~~~~~~~--~~~~~~s~~~~~~~~~~~~~~~~~~~~~V~~w~dl 793 (1391)
T KOG0065|consen 729 LKP--LKKSGAI--L-VFKKGKEKK--------KVKSAGSSSE--IEKLDDSSHQEKNKMVLPFTPLSLTFKDVFYWVDL 793 (1391)
T ss_pred cCc--cccccce--e-eeccchhhh--------cchhcccccc--ccccccccccccccccCCCccccccccceEEEEeC
Confidence 221 0000000 0 000000000 0000000000 00000000000111110 01123345666666
Q ss_pred EEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC--CCceEEEEcCeeCCCChHHhccceEEE
Q 000284 1361 RKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY--PTDGTAFIFGKDIRSDPKAARRLIGYC 1438 (1723)
Q Consensus 1361 ~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~--p~~G~i~i~G~~i~~~~~~~~~~ig~~ 1438 (1723)
.+.-+.. .++++.|+||+=-++||-..||+|++||||||||++|+|-.. -.+|+|.|+|.+... +..+|.+|||
T Consensus 794 ~~~~~~q--G~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q--~tF~R~~GYv 869 (1391)
T KOG0065|consen 794 PYEMPIQ--GGTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ--ETFARVSGYV 869 (1391)
T ss_pred Ccccccc--ccceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch--hhhcccccee
Confidence 6554322 146789999999999999999999999999999999999753 247999999998643 5678889999
Q ss_pred ecCCCCCCCCCHHHHHHHHHHHc---CCChhhHHHHHHHHHHHcCCccccCCCCCC----CChhHHHHHHHHHHHhcCC-
Q 000284 1439 PQFDALLEYLTVQEHLELYARIK---GVAEYRMDDVVMEKLVEFDLLKHAKKPSFT----LSGGNKRKLSVAIAMIGDP- 1510 (1723)
Q Consensus 1439 pQ~~~l~~~lTv~e~l~~~~~~~---g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----LSgG~kqrl~iA~al~~~p- 1510 (1723)
-|+|...+.+||||-|.+.|.+| .++.++..+.++++++.++|++.+|..++. ||..||+||.||.-|+.+|
T Consensus 870 qQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~daiVG~~G~GLs~eQRKrLTIgVELvA~P~ 949 (1391)
T KOG0065|consen 870 EQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYADALVGLPGSGLSTEQRKRLTIGVELVANPS 949 (1391)
T ss_pred ecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhhhhhccCCCCCCCHHHhceeeEEEEEecCCc
Confidence 99998889999999999999887 345555567899999999999888887777 9999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHH-HHHHHcCEEEEEE-CCEEEEecChhH
Q 000284 1511 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMN-EAQALCTRIGIMV-GGQLRCIGSPQH 1579 (1723)
Q Consensus 1511 ~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~-e~~~l~drv~im~-~G~l~~~g~~~~ 1579 (1723)
.||+|||||||||.++.-.+.+.+++++ +.| .||+.|-|... ++-+--||++.|+ .|+.+..|++.+
T Consensus 950 ~ilFLDEPTSGLDsqaA~~i~~~lrkla-~tG-qtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~ 1018 (1391)
T KOG0065|consen 950 SILFLDEPTSGLDSQAAAIVMRFLRKLA-DTG-QTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGE 1018 (1391)
T ss_pred eeEEecCCCCCccHHHHHHHHHHHHHHH-hcC-CeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCccc
Confidence 9999999999999999999999999997 456 58999999865 3334479999996 578999998754
No 39
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.9e-53 Score=449.88 Aligned_cols=220 Identities=30% Similarity=0.496 Sum_probs=208.9
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc--cHHHHhc
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA--DMDEIRK 526 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~--~~~~~r~ 526 (1723)
.|+++||+|+|+ +..+|+|+|++|.+||+++|+||+||||||+|++|.||.+|++|+|.++|.++.. +..++|+
T Consensus 2 mi~i~~l~K~fg----~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~ 77 (240)
T COG1126 2 MIEIKNLSKSFG----DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRR 77 (240)
T ss_pred eEEEEeeeEEeC----CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHH
Confidence 589999999994 5679999999999999999999999999999999999999999999999987743 6778999
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHH-HhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcE
Q 000284 527 GLGVCPQYDILFPELTVREHLEMFA-VLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 605 (1723)
Q Consensus 527 ~ig~~~Q~~~l~~~lTv~e~l~~~~-~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 605 (1723)
++|+|+|+..|||++||.||+.+.. ..+|.+++++++++.++|+++||.++.|.++.+|||||||||+|||||+.+|++
T Consensus 78 ~vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~qLSGGQqQRVAIARALaM~P~v 157 (240)
T COG1126 78 KVGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMDPKV 157 (240)
T ss_pred hcCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCccccCcHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999998764 568999999999999999999999999999999999999999999999999999
Q ss_pred eeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 606 VILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 606 liLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
+++|||||+|||+...++.+.+++++ +|.|+|++||+|.+|..+||||+.|++|++++.|+|+++-.
T Consensus 158 mLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~ 225 (240)
T COG1126 158 MLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFD 225 (240)
T ss_pred EeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhc
Confidence 99999999999999999999999996 59999999999999999999999999999999999987754
No 40
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=8.6e-53 Score=452.50 Aligned_cols=297 Identities=27% Similarity=0.463 Sum_probs=246.2
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1433 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~ 1433 (1723)
++++++|+|+|+ ++.||+|+||+|++||++|++|+|||||||++|||.|+++||+|+|.++|.++.. ..+.
T Consensus 2 ~L~ie~vtK~Fg------~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~~G~I~~~g~~~~~---~~~~ 72 (300)
T COG4152 2 ALEIEGVTKSFG------DKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPTEGEITWNGGPLSQ---EIKN 72 (300)
T ss_pred ceEEecchhccC------ceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCccCceEEEcCcchhh---hhhh
Confidence 589999999995 5779999999999999999999999999999999999999999999999998864 4567
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000284 1434 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1513 (1723)
Q Consensus 1434 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vl 1513 (1723)
+|||+|.+.+|++.+||.|.|.|+|+++|++.+++++.+..+|+++++..+..+++.+||.||+||+.+..|++++|++|
T Consensus 73 rIGyLPEERGLy~k~tv~dql~yla~LkGm~~~e~~~~~~~wLer~~i~~~~~~kIk~LSKGnqQKIQfisaviHePeLl 152 (300)
T COG4152 73 RIGYLPEERGLYPKMTVEDQLKYLAELKGMPKAEIQKKLQAWLERLEIVGKKTKKIKELSKGNQQKIQFISAVIHEPELL 152 (300)
T ss_pred hcccChhhhccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHHHHhccccccccchHHHhhhhhhHHHHHHHHHhcCCCEE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhcCCeEEEEEe
Q 000284 1514 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVK 1593 (1723)
Q Consensus 1514 lLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~~~~~~~~~~~ 1593 (1723)
|||||+|||||.+.+.+.+.|.+++ ++| .|||++||.|+-+|.+|||+++|++|+.+..|+.+++++.||+...+ +.
T Consensus 153 ILDEPFSGLDPVN~elLk~~I~~lk-~~G-atIifSsH~Me~vEeLCD~llmL~kG~~V~~G~v~~ir~~~Gkk~~~-ie 229 (300)
T COG4152 153 ILDEPFSGLDPVNVELLKDAIFELK-EEG-ATIIFSSHRMEHVEELCDRLLMLKKGQTVLYGTVEDIRRSFGKKRLV-IE 229 (300)
T ss_pred EecCCccCCChhhHHHHHHHHHHHH-hcC-CEEEEecchHHHHHHHhhhhheecCCceEEeccHHHHHHhcCCceEE-Ee
Confidence 9999999999999999999999996 455 68999999999999999999999999999999999999999864322 22
Q ss_pred ecCCCcccHHHHHHHHHhccccCCcchhhhhhhhhhhhccccccccCCCceeeechhHHHHHHHHhhhccccceeEeEec
Q 000284 1594 PTEVSSVDLEDLCQIIQERVFDIPSQRRSLLDDLEVCIGGIDSISSENATAAEISLSQEMLLIVGRWLGNEERIKTLISS 1673 (1723)
Q Consensus 1594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1673 (1723)
. +...+.+. .+|...+. . ...++.-..++.-++. -..+-+....+.-|+++..+
T Consensus 230 s----~~s~eeL~--------~ipgi~~~------------~-~~~~G~~~i~ie~e~~-a~~ifq~~a~~g~i~~Fe~~ 283 (300)
T COG4152 230 S----DLSLEELA--------NIPGILKI------------T-ETKDGSWRIQIENETV-AREIFQEVARDGYIQRFELQ 283 (300)
T ss_pred c----cCchHHHh--------cCCCceee------------e-eccCCceEeecccchH-HHHHHHHHhccceeEEEeec
Confidence 1 11111111 22211100 0 0011111112211112 22333333356679999999
Q ss_pred CCChhhHHHHhhccc
Q 000284 1674 SSSPDRIFGEQLSEQ 1688 (1723)
Q Consensus 1674 ~~sl~~vf~~~t~~~ 1688 (1723)
.|||+|+|++.+|.+
T Consensus 284 ~PsL~diFi~~~g~~ 298 (300)
T COG4152 284 EPSLHDIFIEKVGGV 298 (300)
T ss_pred CCCHHHHHHHHhccc
Confidence 999999999999875
No 41
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-53 Score=446.52 Aligned_cols=225 Identities=34% Similarity=0.528 Sum_probs=214.7
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1433 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~ 1433 (1723)
||++.+|+|+|+. ...|++||||++++||++||+|+|||||||++|||++++.|++|.|+++|.|..+++..+|+
T Consensus 1 Ml~v~~l~K~y~~-----~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p~~vrr 75 (245)
T COG4555 1 MLEVTDLTKSYGS-----KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDPSFVRR 75 (245)
T ss_pred CeeeeehhhhccC-----HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccChHHHhh
Confidence 5889999999974 34599999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000284 1434 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1513 (1723)
Q Consensus 1434 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vl 1513 (1723)
+||.++.+..+|..||++|||.|+++++|+.+.++++++.++.++++|.+.+|++++.||-||||||+|||||+++|+++
T Consensus 76 ~IGVl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~~rRv~~~S~G~kqkV~iARAlvh~P~i~ 155 (245)
T COG4555 76 KIGVLFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEYLDRRVGEFSTGMKQKVAIARALVHDPSIL 155 (245)
T ss_pred hcceecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHHHHHHhhhchhhHHHHHHHHHHhcCCCeE
Confidence 99999988999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhcC
Q 000284 1514 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFG 1585 (1723)
Q Consensus 1514 lLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~~~ 1585 (1723)
+|||||+|||..+++.+.+.|++++ +.| ++||++||+|+|++++||||+++++|+++..|+++++..+.+
T Consensus 156 vlDEP~sGLDi~~~r~~~dfi~q~k-~eg-r~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r~~ 225 (245)
T COG4555 156 VLDEPTSGLDIRTRRKFHDFIKQLK-NEG-RAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDARTV 225 (245)
T ss_pred EEcCCCCCccHHHHHHHHHHHHHhh-cCC-cEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHHHh
Confidence 9999999999999999999999985 445 589999999999999999999999999999999999987654
No 42
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-52 Score=454.84 Aligned_cols=221 Identities=34% Similarity=0.544 Sum_probs=211.8
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhcc
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 527 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 527 (1723)
+|+++||+|.|+ ++.||+|+||+|++||+++|+||+||||||+|+||.++++||+|+|+|+|+++.. +..++|++
T Consensus 1 MI~~~nvsk~y~----~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~ 76 (309)
T COG1125 1 MIEFENVSKRYG----NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRK 76 (309)
T ss_pred CceeeeeehhcC----CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHh
Confidence 478999999995 4579999999999999999999999999999999999999999999999999975 77889999
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCc--ccccccCCCChhHHHHHHHHHHHhcCCcE
Q 000284 528 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLAD--KVNIVVRALSGGMKRKLSLGIALIGDSKV 605 (1723)
Q Consensus 528 ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~--~~~~~~~~LSgGqkqrl~lA~al~~~p~v 605 (1723)
||||-|...|||++||.||+.+...++|+++++++++++++|+.+||++ +.++++++|||||+||+.+||||+.+|++
T Consensus 77 IGYviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~eLSGGQQQRVGv~RALAadP~i 156 (309)
T COG1125 77 IGYVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYPHELSGGQQQRVGVARALAADPPI 156 (309)
T ss_pred hhhhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCchhcCcchhhHHHHHHHHhcCCCe
Confidence 9999999999999999999999999999999999999999999999974 78999999999999999999999999999
Q ss_pred eeccCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000284 606 VILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 673 (1723)
Q Consensus 606 liLDEPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~ 673 (1723)
+++|||+++|||.+|.++.+.++++++ |+|||++|||||||..+||||++|++|+++..|+|+++.++
T Consensus 157 lLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~ 226 (309)
T COG1125 157 LLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILAN 226 (309)
T ss_pred EeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhC
Confidence 999999999999999999999999864 89999999999999999999999999999999999988754
No 43
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-51 Score=439.42 Aligned_cols=222 Identities=28% Similarity=0.468 Sum_probs=208.5
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC--ChHHh
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS--DPKAA 1431 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~--~~~~~ 1431 (1723)
+|+++||+|+|+ +..+|+|||++|++||++.|+||+||||||++|+|.|+.+|++|+|.++|.++.. +..+.
T Consensus 2 mi~i~~l~K~fg------~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~ 75 (240)
T COG1126 2 MIEIKNLSKSFG------DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKL 75 (240)
T ss_pred eEEEEeeeEEeC------CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHH
Confidence 689999999996 4679999999999999999999999999999999999999999999999987744 45678
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHH-HHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000284 1432 RRLIGYCPQFDALLEYLTVQEHLELYA-RIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1510 (1723)
Q Consensus 1432 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~-~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p 1510 (1723)
|+++|+|+|+..|||.+||.||+.+.. ..+|.++++.++.+.++|+++||.++++.++.+|||||||||+|||||+.+|
T Consensus 76 R~~vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~qLSGGQqQRVAIARALaM~P 155 (240)
T COG1126 76 RRKVGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMDP 155 (240)
T ss_pred HHhcCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCccccCcHHHHHHHHHHHHcCCC
Confidence 999999999999999999999998754 4578999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000284 1511 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1583 (1723)
Q Consensus 1511 ~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~ 1583 (1723)
+++++|||||+|||+...++.+.+++++ ++| .|.|++||+|.++..+||||+.|++|++++.|+|+++...
T Consensus 156 ~vmLFDEPTSALDPElv~EVL~vm~~LA-~eG-mTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~ 226 (240)
T COG1126 156 KVMLFDEPTSALDPELVGEVLDVMKDLA-EEG-MTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDN 226 (240)
T ss_pred CEEeecCCcccCCHHHHHHHHHHHHHHH-HcC-CeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcC
Confidence 9999999999999999999999999997 455 6999999999999999999999999999999999998653
No 44
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=9.4e-51 Score=478.61 Aligned_cols=290 Identities=37% Similarity=0.652 Sum_probs=242.2
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1433 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~ 1433 (1723)
.++++||+|+|++ ++.||+||||+|++||++||+||||||||||+|+|+|+.+|++|+|.++|.++..+..+.++
T Consensus 4 ~i~~~~l~k~~~~-----~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~~~~~~~ 78 (293)
T COG1131 4 VIEVRNLTKKYGG-----DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKEPAKVRR 78 (293)
T ss_pred eeeecceEEEeCC-----CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccCHHHHHh
Confidence 5789999999962 36799999999999999999999999999999999999999999999999999877778899
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000284 1434 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1513 (1723)
Q Consensus 1434 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vl 1513 (1723)
+|||+||++.+++.+||+|||.+++++++.+....+++++++++.++|.+..++++++||+||||||+||+||+++|++|
T Consensus 79 ~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~lS~G~kqrl~ia~aL~~~P~ll 158 (293)
T COG1131 79 RIGYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKANKKVRTLSGGMKQRLSIALALLHDPELL 158 (293)
T ss_pred heEEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhhCcchhhcCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999999999999999999876556678999999999998778999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhcCCeEEEEEe
Q 000284 1514 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVK 1593 (1723)
Q Consensus 1514 lLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~~~~~~~~~~~ 1593 (1723)
||||||+||||.+++.+|+.|++++++ |++||+++||.++|++.+||||++|++|++++.|+++++...++....+...
T Consensus 159 iLDEPt~GLDp~~~~~~~~~l~~l~~~-g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~~~~~~~~~~~ 237 (293)
T COG1131 159 ILDEPTSGLDPESRREIWELLRELAKE-GGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEKFGGKGVIELE 237 (293)
T ss_pred EECCCCcCCCHHHHHHHHHHHHHHHhC-CCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHhhccCceEEEe
Confidence 999999999999999999999999754 4469999999999999999999999999999999999998887654433332
Q ss_pred ecCCCcccHHHHHHHHHhccccCCcchhhhhhhhhhhhccccccccCCCceeeechhHHHHHHHHhhhccccceeEeEec
Q 000284 1594 PTEVSSVDLEDLCQIIQERVFDIPSQRRSLLDDLEVCIGGIDSISSENATAAEISLSQEMLLIVGRWLGNEERIKTLISS 1673 (1723)
Q Consensus 1594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1673 (1723)
..... . .. . ... . .... + .............+...+..+...
T Consensus 238 ~~~~~-~--~~---~-~~~---~---------------~~~~-----~--------~~~~~~~~~~~~~~~~~~~~~~~~ 279 (293)
T COG1131 238 PERLE-L--AE---L-LEG---L---------------KLVK-----G--------EEELAEILEALLEEGVKIESIEVK 279 (293)
T ss_pred ccccc-c--hh---h-hhc---c---------------cccc-----c--------chhHHHHHHHHHHcCCceeeeecC
Confidence 21100 0 00 0 000 0 0000 0 122233334444456667789999
Q ss_pred CCChhhHHHHhhcc
Q 000284 1674 SSSPDRIFGEQLSE 1687 (1723)
Q Consensus 1674 ~~sl~~vf~~~t~~ 1687 (1723)
.++|+++|+.++++
T Consensus 280 ~~~l~~~~~~~~~~ 293 (293)
T COG1131 280 EPSLEDVFLELTGR 293 (293)
T ss_pred CCCHHHHHHHHccC
Confidence 99999999998863
No 45
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.5e-52 Score=435.68 Aligned_cols=224 Identities=32% Similarity=0.520 Sum_probs=215.7
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcce
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGL 528 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~i 528 (1723)
++++.+|+|+|++ ...|++|+||++++|||+||+|+|||||||+|+||++++.||+|.|+++|.|...+...+|++|
T Consensus 1 Ml~v~~l~K~y~~---~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p~~vrr~I 77 (245)
T COG4555 1 MLEVTDLTKSYGS---KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDPSFVRRKI 77 (245)
T ss_pred CeeeeehhhhccC---HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccChHHHhhhc
Confidence 4789999999975 3459999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeec
Q 000284 529 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVIL 608 (1723)
Q Consensus 529 g~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliL 608 (1723)
|+++-+..++..||++|||.|++++.|+.+.+++++++++.+.++|.+.+|++++.+|-||||||+|||||+++|++++|
T Consensus 78 GVl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~~rRv~~~S~G~kqkV~iARAlvh~P~i~vl 157 (245)
T COG4555 78 GVLFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEYLDRRVGEFSTGMKQKVAIARALVHDPSILVL 157 (245)
T ss_pred ceecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHHHHHHhhhchhhHHHHHHHHHHhcCCCeEEE
Confidence 99998889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHhC-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhhhC
Q 000284 609 DEPTSGMDPYSMRLTWQLIKKIKK-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYG 675 (1723)
Q Consensus 609 DEPtsgLD~~~r~~l~~~l~~~~~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~g 675 (1723)
||||||||..+++.+.+.++++++ ||+||++||.|+|++.+||||+++++|+++..|++..++.+-+
T Consensus 158 DEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r~~ 225 (245)
T COG4555 158 DEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDARTV 225 (245)
T ss_pred cCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHHHh
Confidence 999999999999999999999986 9999999999999999999999999999999999999887644
No 46
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-51 Score=445.30 Aligned_cols=223 Identities=34% Similarity=0.542 Sum_probs=213.0
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhc
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAAR 1432 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~~ 1432 (1723)
||+++|++|.|+ ++.||+|+||+|++||++.|+||+||||||++|||.++++||+|+|+++|+++.. +..++|
T Consensus 1 MI~~~nvsk~y~------~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LR 74 (309)
T COG1125 1 MIEFENVSKRYG------NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELR 74 (309)
T ss_pred CceeeeeehhcC------CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHH
Confidence 588999999996 3679999999999999999999999999999999999999999999999999987 677899
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc--cccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000284 1433 RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL--KHAKKPSFTLSGGNKRKLSVAIAMIGDP 1510 (1723)
Q Consensus 1433 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~LSgG~kqrl~iA~al~~~p 1510 (1723)
++|||+-|..+|||++||.||+.+...+.|.++++++++++++|+.+||. ++++|++++|||||||||.+||||+.+|
T Consensus 75 r~IGYviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~eLSGGQQQRVGv~RALAadP 154 (309)
T COG1125 75 RKIGYVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYPHELSGGQQQRVGVARALAADP 154 (309)
T ss_pred HhhhhhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCchhcCcchhhHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999997 4899999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000284 1511 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1583 (1723)
Q Consensus 1511 ~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~ 1583 (1723)
+||+||||+++|||.+|..+.+.+.++.++-| +|||++||||+|+.+++|||++|++|+++..++|+++..+
T Consensus 155 ~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~-kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~ 226 (309)
T COG1125 155 PILLMDEPFGALDPITRKQLQEEIKELQKELG-KTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILAN 226 (309)
T ss_pred CeEeecCCccccChhhHHHHHHHHHHHHHHhC-CEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhC
Confidence 99999999999999999999999999977666 6899999999999999999999999999999999998764
No 47
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=6e-50 Score=476.39 Aligned_cols=225 Identities=40% Similarity=0.642 Sum_probs=209.3
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1432 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~ 1432 (1723)
.+++++||+|+|++ +.||+|+||+|++||++||+||||||||||+++|+|+++|++|+|+++|.++.......+
T Consensus 6 ~~i~i~~l~k~~~~------~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~ 79 (306)
T PRK13537 6 APIDFRNVEKRYGD------KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHAR 79 (306)
T ss_pred ceEEEEeEEEEECC------eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHH
Confidence 57999999999963 569999999999999999999999999999999999999999999999999977666678
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCE
Q 000284 1433 RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPI 1512 (1723)
Q Consensus 1433 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~v 1512 (1723)
++||||||++.+++.+|++||+.+++..+|.+..+..+++.++++.++|.+..++++++|||||||||+||+||+++|++
T Consensus 80 ~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~aL~~~P~l 159 (306)
T PRK13537 80 QRVGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENKADAKVGELSGGMKRRLTLARALVNDPDV 159 (306)
T ss_pred hcEEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchHhcCchhhCCHHHHHHHHHHHHHhCCCCE
Confidence 89999999999999999999999988888877666677788999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhcC
Q 000284 1513 VILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFG 1585 (1723)
Q Consensus 1513 llLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~~~ 1585 (1723)
|||||||+||||.+++.+|++|++++ ++| +|||++||+++|++.+||||++|++|++++.|+++++++...
T Consensus 160 llLDEPt~gLD~~~~~~l~~~l~~l~-~~g-~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~~~ 230 (306)
T PRK13537 160 LVLDEPTTGLDPQARHLMWERLRSLL-ARG-KTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIESEI 230 (306)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHH-hCC-CEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhccC
Confidence 99999999999999999999999995 444 689999999999999999999999999999999999987643
No 48
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.2e-51 Score=457.44 Aligned_cols=223 Identities=30% Similarity=0.502 Sum_probs=211.2
Q ss_pred eEEEEeEEEEecCc-CCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCC----ccHHH
Q 000284 449 CIQIRKLHKVYATK-RGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNIT----ADMDE 523 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~-~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~----~~~~~ 523 (1723)
+|++++|+|.|..+ .+...||+|+||+|++|||+||+|++|||||||++++.++.+||+|+|.++|.|+. ....+
T Consensus 1 mI~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 1 MIELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred CeEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 48899999999873 33467999999999999999999999999999999999999999999999999885 35678
Q ss_pred HhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCC
Q 000284 524 IRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDS 603 (1723)
Q Consensus 524 ~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p 603 (1723)
.|++|||+|||+.|+...||+||++|..++.|.+++++++++.++|+.+||+++.++++.+|||||||||+|||||+.+|
T Consensus 81 ~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP~qLSGGQKQRVaIARALa~~P 160 (339)
T COG1135 81 LRQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYPAQLSGGQKQRVAIARALANNP 160 (339)
T ss_pred HHhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCchhcCcchhhHHHHHHHHhcCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEeeccCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 604 KVVILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 604 ~vliLDEPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
+||+.|||||+|||.+.+.+.++|+++.+ |-||+++||.||.+..+|||+++|++|++++.|+..++-
T Consensus 161 ~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 161 KILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred CEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 99999999999999999999999999853 999999999999999999999999999999999986653
No 49
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.1e-51 Score=454.63 Aligned_cols=227 Identities=28% Similarity=0.483 Sum_probs=213.3
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC----ChH
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS----DPK 1429 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~----~~~ 1429 (1723)
+|++++++|.|+.+ ..+...||+||||+|++|||+||+|.+|||||||+|++.++.+|++|+|.++|.++.. ...
T Consensus 1 mI~l~~vsK~~~~~-~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr 79 (339)
T COG1135 1 MIELENVSKTFGQT-GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELR 79 (339)
T ss_pred CeEEEeeeeeeccC-CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHH
Confidence 58999999999864 2345679999999999999999999999999999999999999999999999999865 234
Q ss_pred HhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000284 1430 AARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1509 (1723)
Q Consensus 1430 ~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~ 1509 (1723)
..|++||+++|+..|+...||.||+.|...+.|.+++++++++.++|+.+||.+++++++.+|||||||||+|||||+.+
T Consensus 80 ~~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP~qLSGGQKQRVaIARALa~~ 159 (339)
T COG1135 80 QLRQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYPAQLSGGQKQRVAIARALANN 159 (339)
T ss_pred HHHhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCchhcCcchhhHHHHHHHHhcC
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1510 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1510 p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
|+||+.|||||+|||++.+.+.++|++++++.| .||+++||.|+-+.++||||++|++|++++.|+..++..
T Consensus 160 P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lg-lTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF~ 231 (339)
T COG1135 160 PKILLCDEATSALDPETTQSILELLKDINRELG-LTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVFA 231 (339)
T ss_pred CCEEEecCccccCChHHHHHHHHHHHHHHHHcC-CEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhhc
Confidence 999999999999999999999999999987765 799999999999999999999999999999999888754
No 50
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.7e-49 Score=465.04 Aligned_cols=229 Identities=43% Similarity=0.736 Sum_probs=214.9
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcce
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGL 528 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~i 528 (1723)
.++++||+|.|+. ++.||+||||++++||++||+||||||||||+++|+|+++|++|+|.++|.++..+..++|+++
T Consensus 4 ~i~~~~l~k~~~~---~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG---DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKEPAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC---CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccCHHHHHhhe
Confidence 5889999999952 3579999999999999999999999999999999999999999999999999987777889999
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeec
Q 000284 529 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVIL 608 (1723)
Q Consensus 529 g~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliL 608 (1723)
||+||++.+++.|||+|||.|++.+++.+.+..+++++++++.+||.+..++++++||+||||||+||+||+++|+++||
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~lS~G~kqrl~ia~aL~~~P~lliL 160 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKANKKVRTLSGGMKQRLSIALALLHDPELLIL 160 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhhCcchhhcCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999999999999999987666678999999999999877899999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHhC-C-cEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhhhCCcEEE
Q 000284 609 DEPTSGMDPYSMRLTWQLIKKIKK-G-RIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGVGYTL 680 (1723)
Q Consensus 609 DEPtsgLD~~~r~~l~~~l~~~~~-~-~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~g~gy~l 680 (1723)
||||+||||.+|+.+|++|+++++ | +||+++||.++|++.+||||++|++|+++++|++.+++..++.-...
T Consensus 161 DEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~~~~~~~~ 234 (293)
T COG1131 161 DEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEKFGGKGVI 234 (293)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHhhccCceE
Confidence 999999999999999999999964 5 89999999999999999999999999999999999999887765443
No 51
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.3e-48 Score=464.83 Aligned_cols=230 Identities=36% Similarity=0.594 Sum_probs=213.3
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcc
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKG 527 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ 527 (1723)
..++++||+|.|+ ++.||+|+||+|++||++||+||||||||||+++|+|+++|++|+|+++|+++.....+.|++
T Consensus 6 ~~i~i~~l~k~~~----~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~ 81 (306)
T PRK13537 6 APIDFRNVEKRYG----DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQR 81 (306)
T ss_pred ceEEEEeEEEEEC----CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhc
Confidence 4799999999995 346999999999999999999999999999999999999999999999999987665677889
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEee
Q 000284 528 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVI 607 (1723)
Q Consensus 528 ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vli 607 (1723)
+|||||++.+++.+||+||+.+++..+|.+..+.+++++++++.++|.+..++++++||||||||++||+||+++|++||
T Consensus 82 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~aL~~~P~lll 161 (306)
T PRK13537 82 VGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENKADAKVGELSGGMKRRLTLARALVNDPDVLV 161 (306)
T ss_pred EEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchHhcCchhhCCHHHHHHHHHHHHHhCCCCEEE
Confidence 99999999999999999999998888888777777889999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhhhCCcEEEE
Q 000284 608 LDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGVGYTLT 681 (1723)
Q Consensus 608 LDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~g~gy~l~ 681 (1723)
|||||+||||.+|+++|++|++++ +|+|||++||+++|++.+||||++|++|++++.|++.++++.......+.
T Consensus 162 LDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~~~~~~~~~ 236 (306)
T PRK13537 162 LDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIESEIGCDVIE 236 (306)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhccCCCeEEE
Confidence 999999999999999999999986 48999999999999999999999999999999999999987754433333
No 52
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=8.8e-49 Score=470.76 Aligned_cols=228 Identities=38% Similarity=0.630 Sum_probs=209.3
Q ss_pred CcceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHH
Q 000284 1351 DNAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKA 1430 (1723)
Q Consensus 1351 ~~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~ 1430 (1723)
...+|+++||+|+|++ +.+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++......
T Consensus 38 ~~~~i~i~nl~k~y~~------~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~ 111 (340)
T PRK13536 38 STVAIDLAGVSKSYGD------KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARL 111 (340)
T ss_pred CceeEEEEEEEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHH
Confidence 3457999999999963 5699999999999999999999999999999999999999999999999998765566
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000284 1431 ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1510 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p 1510 (1723)
.++.||||||++.+++.+|++||+.+++..++.+..+..+++.++++.++|.+..++++++|||||||||+||+||+++|
T Consensus 112 ~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~LS~G~kqrv~lA~aL~~~P 191 (340)
T PRK13536 112 ARARIGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKADARVSDLSGGMKRRLTLARALINDP 191 (340)
T ss_pred HhccEEEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhCCChhhCCHHHHHHHHHHHHHhcCC
Confidence 78899999999999999999999998888877665555667788999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhcCC
Q 000284 1511 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGN 1586 (1723)
Q Consensus 1511 ~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~~~~ 1586 (1723)
++|||||||+||||.+++.+|++|+++++ +| +|||++||++++++.+||||++|++|++++.|++++++++...
T Consensus 192 ~lLiLDEPt~gLD~~~r~~l~~~l~~l~~-~g-~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~~~~ 265 (340)
T PRK13536 192 QLLILDEPTTGLDPHARHLIWERLRSLLA-RG-KTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDEHIG 265 (340)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHHh-CC-CEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhhccC
Confidence 99999999999999999999999999964 44 5899999999999999999999999999999999999876543
No 53
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.7e-49 Score=425.53 Aligned_cols=295 Identities=26% Similarity=0.477 Sum_probs=251.2
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcce
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGL 528 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~i 528 (1723)
++++++|+|+|+ ++.||+|+||++++|+|+|++|||||||||+++||.|+++||+|+|.++|.+++. ..+.+|
T Consensus 2 ~L~ie~vtK~Fg----~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~~G~I~~~g~~~~~---~~~~rI 74 (300)
T COG4152 2 ALEIEGVTKSFG----DKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPTEGEITWNGGPLSQ---EIKNRI 74 (300)
T ss_pred ceEEecchhccC----ceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCccCceEEEcCcchhh---hhhhhc
Confidence 588999999994 5679999999999999999999999999999999999999999999999998864 456789
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeec
Q 000284 529 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVIL 608 (1723)
Q Consensus 529 g~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliL 608 (1723)
||.|.+..|++.+||.|.|.|+++++|+++++++++++..|+++++..+..+++.+||-|++||+++-.|++++|+++||
T Consensus 75 GyLPEERGLy~k~tv~dql~yla~LkGm~~~e~~~~~~~wLer~~i~~~~~~kIk~LSKGnqQKIQfisaviHePeLlIL 154 (300)
T COG4152 75 GYLPEERGLYPKMTVEDQLKYLAELKGMPKAEIQKKLQAWLERLEIVGKKTKKIKELSKGNQQKIQFISAVIHEPELLIL 154 (300)
T ss_pred ccChhhhccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHHHHhccccccccchHHHhhhhhhHHHHHHHHHhcCCCEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhhhCCcEEEEEEecCC
Q 000284 609 DEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGVGYTLTLVKSAP 687 (1723)
Q Consensus 609 DEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~g~gy~l~~~~~~~ 687 (1723)
|||+|||||.+.+.+-+.+.+++ +|.|||++||.|+.+++|||++++|++|+.+..|+....++.||.--. .+. ...
T Consensus 155 DEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me~vEeLCD~llmL~kG~~V~~G~v~~ir~~~Gkk~~-~ie-s~~ 232 (300)
T COG4152 155 DEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRMEHVEELCDRLLMLKKGQTVLYGTVEDIRRSFGKKRL-VIE-SDL 232 (300)
T ss_pred cCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHHHHHHHhhhhheecCCceEEeccHHHHHHhcCCceE-EEe-ccC
Confidence 99999999999999999999998 599999999999999999999999999999999999999999997432 222 221
Q ss_pred ChhhHHHHHHhhCCCceEEeeeCcEEEEEecCCCcchHHHHHHHHHHhhhhccccccccccccccCCCeeEEEecCCCHH
Q 000284 688 DASAAADIVYRHIPSALCVSEVGTEITFKLPLASSSSFESMFREIESCIRKSVSKVEADATEDTDYLGIESFGISVTTLE 767 (1723)
Q Consensus 688 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~lp~~~~~~~~~l~~~le~~~~~~~~~~~~~~~~~~~~~~i~~~~is~ttLE 767 (1723)
..++ ...+|.........+-.-+ +..++......+|+.+.. +.-|..|.+..+||+
T Consensus 233 s~ee-----L~~ipgi~~~~~~~~G~~~-i~ie~e~~a~~ifq~~a~------------------~g~i~~Fe~~~PsL~ 288 (300)
T COG4152 233 SLEE-----LANIPGILKITETKDGSWR-IQIENETVAREIFQEVAR------------------DGYIQRFELQEPSLH 288 (300)
T ss_pred chHH-----HhcCCCceeeeeccCCceE-eecccchHHHHHHHHHhc------------------cceeEEEeecCCCHH
Confidence 2121 2345665544432221222 222333344556655543 456889999999999
Q ss_pred HHHHHHhcC
Q 000284 768 EVFLRVAGC 776 (1723)
Q Consensus 768 evfl~~~~~ 776 (1723)
|+|+--++.
T Consensus 289 diFi~~~g~ 297 (300)
T COG4152 289 DIFIEKVGG 297 (300)
T ss_pred HHHHHHhcc
Confidence 999976553
No 54
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.2e-47 Score=460.87 Aligned_cols=231 Identities=37% Similarity=0.588 Sum_probs=213.0
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcc
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKG 527 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ 527 (1723)
..|+++||+|.|+ ++.||+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.......++.
T Consensus 40 ~~i~i~nl~k~y~----~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~~ 115 (340)
T PRK13536 40 VAIDLAGVSKSYG----DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLARAR 115 (340)
T ss_pred eeEEEEEEEEEEC----CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhcc
Confidence 4799999999995 346999999999999999999999999999999999999999999999999987655677889
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEee
Q 000284 528 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVI 607 (1723)
Q Consensus 528 ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vli 607 (1723)
+|||||++.+++.+||.||+.+++..++.+..+.+++++++++.++|.+..++++++||||||||++||+||+++|++||
T Consensus 116 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~LS~G~kqrv~lA~aL~~~P~lLi 195 (340)
T PRK13536 116 IGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKADARVSDLSGGMKRRLTLARALINDPQLLI 195 (340)
T ss_pred EEEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhCCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999999999988877777666667788899999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhhhCCcEEEEE
Q 000284 608 LDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGVGYTLTL 682 (1723)
Q Consensus 608 LDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~g~gy~l~~ 682 (1723)
|||||+||||.+|+++|++|++++ +|+|||++||++++++.+||||++|++|++++.|++.++++.+...+...+
T Consensus 196 LDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~~~~~~~~~~ 271 (340)
T PRK13536 196 LDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDEHIGCQVIEI 271 (340)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhhccCceEEEE
Confidence 999999999999999999999986 589999999999999999999999999999999999999887655444433
No 55
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=9.9e-49 Score=423.83 Aligned_cols=221 Identities=32% Similarity=0.557 Sum_probs=208.5
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc----cHHH
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA----DMDE 523 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~----~~~~ 523 (1723)
..|++++|+|+|+ ++.+++|+||+|++||+++++|++|+|||||+++|.|+++|++|+|.++|+++.. +..+
T Consensus 7 ~~I~vr~v~~~fG----~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ 82 (263)
T COG1127 7 PLIEVRGVTKSFG----DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYE 82 (263)
T ss_pred ceEEEeeeeeecC----CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHH
Confidence 5799999999994 5679999999999999999999999999999999999999999999999999853 4557
Q ss_pred HhcceEEEccCCCCCCCCCHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHcCCCcc-cccccCCCChhHHHHHHHHHHHhc
Q 000284 524 IRKGLGVCPQYDILFPELTVREHLEMFAVL-KGVKEELLESVVAEMVDEVGLADK-VNIVVRALSGGMKRKLSLGIALIG 601 (1723)
Q Consensus 524 ~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~-~g~~~~~~~~~v~~~l~~~~l~~~-~~~~~~~LSgGqkqrl~lA~al~~ 601 (1723)
+|+++|+++|+..||..|||+||+.|..+- ..++++.+++.+..-|+.+||... .+..+++|||||++|++||||++.
T Consensus 83 ir~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~PsELSGGM~KRvaLARAial 162 (263)
T COG1127 83 IRKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYPSELSGGMRKRVALARAIAL 162 (263)
T ss_pred HHhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCchhhcchHHHHHHHHHHHhc
Confidence 899999999999999999999999997654 468899999999999999999987 899999999999999999999999
Q ss_pred CCcEeeccCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 602 DSKVVILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 602 ~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
+|+++++||||+||||.+...+-++|+++++ |.|++++|||++++..+||||+++.+|+++.+|+++++.+
T Consensus 163 dPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 163 DPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELLA 235 (263)
T ss_pred CCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHHh
Confidence 9999999999999999999999999999975 8999999999999999999999999999999999999865
No 56
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=2.2e-47 Score=454.93 Aligned_cols=290 Identities=32% Similarity=0.522 Sum_probs=234.1
Q ss_pred cceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcceEEEccCCCCCCCCCHHH
Q 000284 466 CCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLGVCPQYDILFPELTVRE 545 (1723)
Q Consensus 466 ~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig~~~Q~~~l~~~lTv~e 545 (1723)
+.+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.......|+.+|||||++.+++.+||+|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e 85 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTGRE 85 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcHHH
Confidence 46999999999999999999999999999999999999999999999999987655567888999999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeeccCCCCCCCHHHHHHHHH
Q 000284 546 HLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQ 625 (1723)
Q Consensus 546 ~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~ 625 (1723)
|+.+++..++.+..+.+++++++++.+||.+..++++++|||||||||+||+||+++|++|||||||+||||.+++.+|+
T Consensus 86 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~ 165 (302)
T TIGR01188 86 NLEMMGRLYGLPKDEAEERAEELLELFELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWD 165 (302)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHH
Confidence 99998888887777777889999999999998999999999999999999999999999999999999999999999999
Q ss_pred HHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhhhCCcEEEEEEecCCC-hhhHHHHH----Hhh
Q 000284 626 LIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGVGYTLTLVKSAPD-ASAAADIV----YRH 699 (1723)
Q Consensus 626 ~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~g~gy~l~~~~~~~~-~~~~~~~~----~~~ 699 (1723)
+|++++ +|+|||++||++++++.+||||++|++|++++.|++.+++++++..+ +.+...... ........ ..+
T Consensus 166 ~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (302)
T TIGR01188 166 YIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRRLGKDT-LESRPRDIQSLKVEVSMLIAELGET 244 (302)
T ss_pred HHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHhcCCce-EEEEecCchhhhhhhhHHHhhhhhc
Confidence 999986 58999999999999999999999999999999999999988876543 232221111 11000111 111
Q ss_pred CCCceEEeeeCcEEEEEecCCCcchHHHHHHHHHHhhhhccccccccccccccCCCeeEEEecCCCHHHHHHHHh
Q 000284 700 IPSALCVSEVGTEITFKLPLASSSSFESMFREIESCIRKSVSKVEADATEDTDYLGIESFGISVTTLEEVFLRVA 774 (1723)
Q Consensus 700 ~p~~~~~~~~~~~~~~~lp~~~~~~~~~l~~~le~~~~~~~~~~~~~~~~~~~~~~i~~~~is~ttLEevfl~~~ 774 (1723)
.+........++.+.+..+.. ......+++.+.. ....+.++.+...+|||+|+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~-----------------~~~~i~~~~~~~~~Le~~f~~~~ 301 (302)
T TIGR01188 245 GLGLLAVTVDSDRIKILVPDG-DETVPEIVEAAIR-----------------NGIRIRSISTERPSLDDVFLKLT 301 (302)
T ss_pred cccceeeeecCCeEEEEEcCc-hhHHHHHHHHHHH-----------------CCCceEEEEcCCCCHHHHHHHHh
Confidence 222222222234444444422 1223444444432 24678899999999999999875
No 57
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=1.9e-48 Score=458.93 Aligned_cols=204 Identities=23% Similarity=0.320 Sum_probs=168.8
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1432 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~ 1432 (1723)
+++.++|+++.|.+ +..+.++++|.|+.++.++++||||||||||+|+++|++.|+.|.|.-.- .
T Consensus 388 pvi~~~nv~F~y~~-----~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~----------H 452 (614)
T KOG0927|consen 388 PVIMVQNVSFGYSD-----NPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHS----------H 452 (614)
T ss_pred CeEEEeccccCCCC-----cchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccccccccccccc----------c
Confidence 57899999999964 23689999999999999999999999999999999999999999975432 2
Q ss_pred cceEEEecC--CCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHHHhcC
Q 000284 1433 RLIGYCPQF--DALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIAMIGD 1509 (1723)
Q Consensus 1433 ~~ig~~pQ~--~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~kqrl~iA~al~~~ 1509 (1723)
.++++.-|+ ..+.-+.++-|++.- . .++....+.++.+|.++||+ +..+.+.++||+|||+||.+|+.++..
T Consensus 453 ~~~~~y~Qh~~e~ldl~~s~le~~~~---~--~~~~~~~e~~r~ilgrfgLtgd~q~~p~~~LS~Gqr~rVlFa~l~~kq 527 (614)
T KOG0927|consen 453 NKLPRYNQHLAEQLDLDKSSLEFMMP---K--FPDEKELEEMRSILGRFGLTGDAQVVPMSQLSDGQRRRVLFARLAVKQ 527 (614)
T ss_pred ccchhhhhhhHhhcCcchhHHHHHHH---h--ccccchHHHHHHHHHHhCCCccccccchhhcccccchhHHHHHHHhcC
Confidence 336666676 344445677776532 1 12223356778899999998 667899999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEE-EecChhHHH
Q 000284 1510 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLR-CIGSPQHLK 1581 (1723)
Q Consensus 1510 p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~-~~g~~~~l~ 1581 (1723)
|.+|+|||||+|||..+...+.+.|.++ .| +||++|||+..+..++++|.+..+|.+. ..|+...-+
T Consensus 528 P~lLlLDEPtnhLDi~tid~laeaiNe~---~G--gvv~vSHDfrlI~qVaeEi~~c~~~~~~~~~G~i~~yk 595 (614)
T KOG0927|consen 528 PHLLLLDEPTNHLDIETIDALAEAINEF---PG--GVVLVSHDFRLISQVAEEIWVCENGTVTKWDGDIEIYK 595 (614)
T ss_pred CcEEEecCCCcCCCchhHHHHHHHHhcc---CC--ceeeeechhhHHHHHHHHhHhhccCceeecCccHHHHH
Confidence 9999999999999999999999999886 23 5999999999999999999999998864 456665443
No 58
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.7e-48 Score=422.03 Aligned_cols=224 Identities=30% Similarity=0.479 Sum_probs=208.6
Q ss_pred cceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC----
Q 000284 1352 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD---- 1427 (1723)
Q Consensus 1352 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~---- 1427 (1723)
++.|++++|+|+|+ ++.+++||||+|++||++||+||+|+|||||+|.|.|+++|++|+|.++|+++..-
T Consensus 6 ~~~I~vr~v~~~fG------~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~ 79 (263)
T COG1127 6 EPLIEVRGVTKSFG------DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEE 79 (263)
T ss_pred cceEEEeeeeeecC------CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHH
Confidence 46899999999995 46799999999999999999999999999999999999999999999999998652
Q ss_pred hHHhccceEEEecCCCCCCCCCHHHHHHHHHHH-cCCChhhHHHHHHHHHHHcCCccc-cCCCCCCCChhHHHHHHHHHH
Q 000284 1428 PKAARRLIGYCPQFDALLEYLTVQEHLELYARI-KGVAEYRMDDVVMEKLVEFDLLKH-AKKPSFTLSGGNKRKLSVAIA 1505 (1723)
Q Consensus 1428 ~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~-~g~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~LSgG~kqrl~iA~a 1505 (1723)
..++|+++|+++|+.+||..+||+||+.|..+- ..++++.+++.+...|+.+||... +++.+++|||||++|++||||
T Consensus 80 ~~~ir~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~PsELSGGM~KRvaLARA 159 (263)
T COG1127 80 LYEIRKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYPSELSGGMRKRVALARA 159 (263)
T ss_pred HHHHHhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCchhhcchHHHHHHHHHH
Confidence 235789999999999999999999999997654 468888889999999999999876 999999999999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1506 MIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1506 l~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
++.+|++|++||||+||||.+...+-++|++++++-| .|++++|||++++..+|||++++.+|+++..|+++++.+
T Consensus 160 ialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg-~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 160 IALDPELLFLDEPTSGLDPISAGVIDELIRELNDALG-LTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELLA 235 (263)
T ss_pred HhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhC-CEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHHh
Confidence 9999999999999999999999999999999986655 799999999999999999999999999999999999875
No 59
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=4.9e-47 Score=451.39 Aligned_cols=297 Identities=29% Similarity=0.474 Sum_probs=241.0
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcceE
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 529 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 529 (1723)
++++|++|+|+ ++.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.....++++++|
T Consensus 3 l~~~~l~~~~~----~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~~~~~~~~~ig 78 (301)
T TIGR03522 3 IRVSSLTKLYG----TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQNPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEEC----CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccChHHHHhceE
Confidence 78999999995 34699999999999999999999999999999999999999999999999998765567788999
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeecc
Q 000284 530 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 609 (1723)
Q Consensus 530 ~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 609 (1723)
||||++.+++.+||.||+.+++.++|.+.++.+++++++++.+||.+..++++++||||||||++||+||+++|++||||
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~p~lliLD 158 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPEQHKKIGQLSKGYRQRVGLAQALIHDPKVLILD 158 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999999999999999888888776777788999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhhhCCcEEEEEEecCCCh
Q 000284 610 EPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGVGYTLTLVKSAPDA 689 (1723)
Q Consensus 610 EPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~g~gy~l~~~~~~~~~ 689 (1723)
|||+||||.+++++|++|+++++++|||++||++++++.+||||++|++|++++.|++.++++.++ +..+.+.......
T Consensus 159 EPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~-~~~~~i~~~~~~~ 237 (301)
T TIGR03522 159 EPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAANK-KQVIEVEFEEQID 237 (301)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHhcC-CceEEEEecCcch
Confidence 999999999999999999999878999999999999999999999999999999999999987744 3334433322111
Q ss_pred hhHHHHHHhhCCCceEEee-eCcEEEEEecCCCcchHHHHHHHHHHhhhhccccccccccccccCCCeeEEEecCCCHHH
Q 000284 690 SAAADIVYRHIPSALCVSE-VGTEITFKLPLASSSSFESMFREIESCIRKSVSKVEADATEDTDYLGIESFGISVTTLEE 768 (1723)
Q Consensus 690 ~~~~~~~~~~~p~~~~~~~-~~~~~~~~lp~~~~~~~~~l~~~le~~~~~~~~~~~~~~~~~~~~~~i~~~~is~ttLEe 768 (1723)
. ... +..+....... .++...+..+.. .....++.+.+.. ....+.++.....+|||
T Consensus 238 ~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~sLe~ 295 (301)
T TIGR03522 238 L---QLF-ETLEEISSVKNTGGNTWKLTFETP-NDTRPEIFKLAQQ-----------------KGLKLISLQQNEKNLEQ 295 (301)
T ss_pred h---HHH-hhccccceeeecCCCeEEEEEcCc-cchHHHHHHHHHH-----------------CCCceEEEEeCCCCHHH
Confidence 1 111 11111111111 223333332221 1122333333321 24568889999999999
Q ss_pred HHHHH
Q 000284 769 VFLRV 773 (1723)
Q Consensus 769 vfl~~ 773 (1723)
+|.++
T Consensus 296 ~~~~~ 300 (301)
T TIGR03522 296 VFREI 300 (301)
T ss_pred HHHHh
Confidence 99875
No 60
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=3e-47 Score=453.23 Aligned_cols=223 Identities=33% Similarity=0.533 Sum_probs=206.9
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1433 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~ 1433 (1723)
.++++|++|+|+ ++.+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.......++
T Consensus 2 ~l~~~~l~~~~~------~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~~~~~~~~ 75 (301)
T TIGR03522 2 SIRVSSLTKLYG------TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQNPKEVQR 75 (301)
T ss_pred EEEEEEEEEEEC------CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccChHHHHh
Confidence 478999999995 35699999999999999999999999999999999999999999999999998766566788
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000284 1434 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1513 (1723)
Q Consensus 1434 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vl 1513 (1723)
++||+||++.+++.+|+.||+.+.+..++.+.++..++++++++.+||.+..++++++|||||||||+||+||+++|++|
T Consensus 76 ~ig~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~p~ll 155 (301)
T TIGR03522 76 NIGYLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPEQHKKIGQLSKGYRQRVGLAQALIHDPKVL 155 (301)
T ss_pred ceEEecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchHhcCchhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 89999999999999999999999888888766666677889999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhcC
Q 000284 1514 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFG 1585 (1723)
Q Consensus 1514 lLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~~~ 1585 (1723)
||||||+||||.+++.+|+.|++++ + + +|||++||++++++.+||||++|++|++++.|++++++.+.+
T Consensus 156 iLDEPt~gLD~~~~~~l~~~l~~~~-~-~-~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 224 (301)
T TIGR03522 156 ILDEPTTGLDPNQLVEIRNVIKNIG-K-D-KTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAANK 224 (301)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHhc-C-C-CEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHhcC
Confidence 9999999999999999999999984 3 4 689999999999999999999999999999999999987644
No 61
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=3.9e-47 Score=452.76 Aligned_cols=212 Identities=42% Similarity=0.719 Sum_probs=197.1
Q ss_pred cceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccceEEEecCCCCCCCCCHHH
Q 000284 1373 KVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRLIGYCPQFDALLEYLTVQE 1452 (1723)
Q Consensus 1373 ~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~~ig~~pQ~~~l~~~lTv~e 1452 (1723)
+.+|+|+||+|++||++||+||||||||||+|+|+|+++|++|+|.++|.++.......+++|||+||++.+++.+|++|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e 85 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTGRE 85 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcHHH
Confidence 56999999999999999999999999999999999999999999999999987655566788999999999999999999
Q ss_pred HHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHH
Q 000284 1453 HLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWE 1532 (1723)
Q Consensus 1453 ~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~ 1532 (1723)
|+.+++..++.+..+.++++.++++.++|.+..++++++|||||||||+||+||+++|++|||||||+||||.+++.+++
T Consensus 86 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~ 165 (302)
T TIGR01188 86 NLEMMGRLYGLPKDEAEERAEELLELFELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWD 165 (302)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHH
Confidence 99998888877666666778899999999988999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhcCC
Q 000284 1533 VISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGN 1586 (1723)
Q Consensus 1533 ~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~~~~ 1586 (1723)
.|+++++ +| +|||++||++++++.+||||++|++|++++.|++++++++++.
T Consensus 166 ~l~~~~~-~g-~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~~~~ 217 (302)
T TIGR01188 166 YIRALKE-EG-VTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRRLGK 217 (302)
T ss_pred HHHHHHh-CC-CEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHhcCC
Confidence 9999863 44 6899999999999999999999999999999999999887654
No 62
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.1e-46 Score=449.17 Aligned_cols=225 Identities=39% Similarity=0.632 Sum_probs=205.1
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1432 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~ 1432 (1723)
.+|+++||+|+|++ +.+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.......+
T Consensus 3 ~~i~~~~l~~~~~~------~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~ 76 (303)
T TIGR01288 3 VAIDLVGVSKSYGD------KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLAR 76 (303)
T ss_pred cEEEEEeEEEEeCC------eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHh
Confidence 47999999999963 469999999999999999999999999999999999999999999999999865555567
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCE
Q 000284 1433 RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPI 1512 (1723)
Q Consensus 1433 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~v 1512 (1723)
+++||+||++.+++.+|++||+.+++..++.+..+..+++.++++.+++.+..++++++|||||||||+||+||+++|++
T Consensus 77 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~l 156 (303)
T TIGR01288 77 VAIGVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKADVRVALLSGGMKRRLTLARALINDPQL 156 (303)
T ss_pred hcEEEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCE
Confidence 88999999999999999999999877766665555556778899999999889999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhcC
Q 000284 1513 VILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFG 1585 (1723)
Q Consensus 1513 llLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~~~ 1585 (1723)
|||||||+||||.+++.+++.|+++++ +| +|||++||++++++.+|||+++|++|++++.|+++++.+...
T Consensus 157 llLDEPt~gLD~~~~~~l~~~l~~~~~-~g-~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 227 (303)
T TIGR01288 157 LILDEPTTGLDPHARHLIWERLRSLLA-RG-KTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDEQI 227 (303)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHh-CC-CEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhhcC
Confidence 999999999999999999999999864 44 589999999999999999999999999999999999987654
No 63
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=6.2e-46 Score=442.69 Aligned_cols=231 Identities=38% Similarity=0.614 Sum_probs=210.2
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcc
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKG 527 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ 527 (1723)
..|+++||+|.|++ +.+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.......|+.
T Consensus 3 ~~i~~~~l~~~~~~----~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 78 (303)
T TIGR01288 3 VAIDLVGVSKSYGD----KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVA 78 (303)
T ss_pred cEEEEEeEEEEeCC----eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhc
Confidence 36999999999953 46999999999999999999999999999999999999999999999999886544566889
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEee
Q 000284 528 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVI 607 (1723)
Q Consensus 528 ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vli 607 (1723)
+||+||++.+++.+||+||+.+++...+.+..+.+++++++++.++|.+..++++++||||||||++||+||+.+|++||
T Consensus 79 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lll 158 (303)
T TIGR01288 79 IGVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKADVRVALLSGGMKRRLTLARALINDPQLLI 158 (303)
T ss_pred EEEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999999999987766676666666788899999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhhhCCcEEEEE
Q 000284 608 LDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGVGYTLTL 682 (1723)
Q Consensus 608 LDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~g~gy~l~~ 682 (1723)
|||||+||||.+++.++++|++++ +|+|||++||++++++.+||||++|++|++++.|++.++++.+...+...+
T Consensus 159 LDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~~~~ 234 (303)
T TIGR01288 159 LDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDEQIGCNVIEI 234 (303)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhhcCCCeEEEE
Confidence 999999999999999999999985 589999999999999999999999999999999999999877655444433
No 64
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-47 Score=446.06 Aligned_cols=223 Identities=30% Similarity=0.493 Sum_probs=210.4
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcce
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGL 528 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~i 528 (1723)
.|+++||+|.|++ ..||+|+||+|++||+++|+|||||||||||+||+|+.+||+|+|.|+|.+++.- ...+|+|
T Consensus 3 ~i~l~~v~K~yg~----~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l-~P~~R~i 77 (338)
T COG3839 3 ELELKNVRKSFGS----FEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDL-PPEKRGI 77 (338)
T ss_pred EEEEeeeEEEcCC----ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCC-ChhHCCE
Confidence 6899999999953 2299999999999999999999999999999999999999999999999999752 2335789
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeec
Q 000284 529 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVIL 608 (1723)
Q Consensus 529 g~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliL 608 (1723)
|+|||+..|||+|||+||+.|..++++.++++++++|+++++.++|++.+++++.+|||||||||++||||+.+|++++|
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~~LSGGQrQRVAlaRAlVr~P~v~L~ 157 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPLQLSGGQRQRVALARALVRKPKVFLL 157 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCcccCChhhHHHHHHHHHHhcCCCEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhhhCC
Q 000284 609 DEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGV 676 (1723)
Q Consensus 609 DEPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~g~ 676 (1723)
|||+|+||+..|..+...|+++++ |.|+|++|||-.||..++|||++|++|++...|+|.++.++...
T Consensus 158 DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~n 227 (338)
T COG3839 158 DEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPAN 227 (338)
T ss_pred cCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCccc
Confidence 999999999999999999999864 89999999999999999999999999999999999999876544
No 65
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.2e-47 Score=419.87 Aligned_cols=204 Identities=28% Similarity=0.469 Sum_probs=192.3
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcc
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKG 527 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ 527 (1723)
..+++++++|.|++ ..||+|+||+|.+||+++|+||+|||||||+|+|+|+.+|++|+|.++|..+. .....
T Consensus 2 ~~l~i~~v~~~f~~----~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~----~p~~~ 73 (248)
T COG1116 2 ALLEIEGVSKSFGG----VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVT----GPGPD 73 (248)
T ss_pred ceEEEEeeEEEeCc----eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccC----CCCCC
Confidence 36899999999954 67999999999999999999999999999999999999999999999998873 23457
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEee
Q 000284 528 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVI 607 (1723)
Q Consensus 528 ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vli 607 (1723)
+|||+|++.|+|.+||+||+.+.....|.++++.+++++++|+.+||.+..++++++|||||||||+|||||+.+|++|+
T Consensus 74 ~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P~qLSGGMrQRVaiARAL~~~P~lLL 153 (248)
T COG1116 74 IGYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYPHQLSGGMRQRVAIARALATRPKLLL 153 (248)
T ss_pred EEEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCccccChHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999999999999999998888888899999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCC
Q 000284 608 LDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANG 659 (1723)
Q Consensus 608 LDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G 659 (1723)
||||+++||+.+|..+.+.|.++. .++||+++|||.+||-.++|||++|.++
T Consensus 154 lDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 154 LDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred EcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 999999999999999999998873 4899999999999999999999999984
No 66
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=6.2e-48 Score=404.14 Aligned_cols=222 Identities=33% Similarity=0.554 Sum_probs=203.5
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCCh--HH
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDP--KA 1430 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~--~~ 1430 (1723)
..|.++||.|+|+ ++.+++++||+|++||++||+|||||||||+|.|++|+.+|++|+|.++|.|++..+ .+
T Consensus 3 ~~L~a~~l~K~y~------kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~R 76 (243)
T COG1137 3 STLVAENLAKSYK------KRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKR 76 (243)
T ss_pred cEEEehhhhHhhC------CeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHH
Confidence 4689999999996 467999999999999999999999999999999999999999999999999998754 45
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChh--hHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhc
Q 000284 1431 ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEY--RMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIG 1508 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~--~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~ 1508 (1723)
+|..|||+||++.+|..+||+||+.....++..+.+ +.+.+.+++|++|++.+.++++..+||||||||+.|||||+.
T Consensus 77 ArlGigYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hlr~~~a~sLSGGERRR~EIARaLa~ 156 (243)
T COG1137 77 ARLGIGYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHLRDSKAYSLSGGERRRVEIARALAA 156 (243)
T ss_pred hhcCcccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHHhcCcccccccchHHHHHHHHHHhc
Confidence 677899999999999999999999988777664433 344457799999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1509 DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1509 ~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
+|+.++||||++|+||.+...+.++|+.++ ++| ..|++|-|+..|...+|||..||.+|++.+.|+|+++.+
T Consensus 157 ~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~-~rg-iGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~ 228 (243)
T COG1137 157 NPKFILLDEPFAGVDPIAVIDIQRIIKHLK-DRG-IGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVN 228 (243)
T ss_pred CCCEEEecCCccCCCchhHHHHHHHHHHHH-hCC-ceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhc
Confidence 999999999999999999999999999996 444 689999999999999999999999999999999999865
No 67
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.3e-47 Score=441.07 Aligned_cols=226 Identities=32% Similarity=0.499 Sum_probs=211.9
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1432 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~ 1432 (1723)
..|+++||+|.|++ ..+|+++||+|++||+++|+||||||||||||||+|+++|++|+|+|+|.+++.-+. .+
T Consensus 2 ~~i~l~~v~K~yg~------~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P-~~ 74 (338)
T COG3839 2 AELELKNVRKSFGS------FEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPP-EK 74 (338)
T ss_pred cEEEEeeeEEEcCC------ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCh-hH
Confidence 36899999999974 229999999999999999999999999999999999999999999999999987322 34
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCE
Q 000284 1433 RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPI 1512 (1723)
Q Consensus 1433 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~v 1512 (1723)
|.||+|+|+.+|||.|||+||+.|..+.++.+++++++++++..+.++|++..++++.+|||||||||++||||+.+|++
T Consensus 75 R~iamVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~~LSGGQrQRVAlaRAlVr~P~v 154 (338)
T COG3839 75 RGIAMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPLQLSGGQRQRVALARALVRKPKV 154 (338)
T ss_pred CCEEEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCcccCChhhHHHHHHHHHHhcCCCE
Confidence 77999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhcCC
Q 000284 1513 VILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGN 1586 (1723)
Q Consensus 1513 llLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~~~~ 1586 (1723)
++||||.|.||+..|..+...|+++.++-| .|+|++|||..|+..++|||++|++|++...|+|.++.++..+
T Consensus 155 ~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~-~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~n 227 (338)
T COG3839 155 FLLDEPLSNLDAKLRVLMRSEIKKLHERLG-TTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPAN 227 (338)
T ss_pred EEecCchhHhhHHHHHHHHHHHHHHHHhcC-CcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCccc
Confidence 999999999999999999999999976554 7899999999999999999999999999999999999876544
No 68
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.5e-47 Score=446.47 Aligned_cols=221 Identities=29% Similarity=0.503 Sum_probs=206.7
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcc
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKG 527 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ 527 (1723)
..++++||+|.|+ +..||+|+||+|++||+++|||||||||||||+||+|+..|++|+|.++|+++.. ....+|.
T Consensus 4 ~~l~i~~v~k~yg----~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~-lpp~kR~ 78 (352)
T COG3842 4 PALEIRNVSKSFG----DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITD-VPPEKRP 78 (352)
T ss_pred ceEEEEeeeeecC----CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCC-CChhhcc
Confidence 4799999999995 4679999999999999999999999999999999999999999999999999975 3345678
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEe
Q 000284 528 LGVCPQYDILFPELTVREHLEMFAVLKG-VKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVV 606 (1723)
Q Consensus 528 ig~~~Q~~~l~~~lTv~e~l~~~~~~~g-~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vl 606 (1723)
||+|||+..|||+|||+||+.|+.++++ ..+++++++++++|+.++|.+..++++++|||||||||+|||||+.+|++|
T Consensus 79 ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p~qLSGGQqQRVALARAL~~~P~vL 158 (352)
T COG3842 79 IGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKPHQLSGGQQQRVALARALVPEPKVL 158 (352)
T ss_pred cceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhChhhhChHHHHHHHHHHHhhcCcchh
Confidence 9999999999999999999999998655 455778999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000284 607 ILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 673 (1723)
Q Consensus 607 iLDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~ 673 (1723)
+||||.|+||..-|.++..-|+++. .|.|.|++|||-+||..++|||+||++|+|...|+|.++-.+
T Consensus 159 LLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~ 227 (352)
T COG3842 159 LLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYER 227 (352)
T ss_pred hhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhC
Confidence 9999999999999999999999885 399999999999999999999999999999999999888543
No 69
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.1e-47 Score=402.34 Aligned_cols=220 Identities=30% Similarity=0.496 Sum_probs=203.9
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cH-HHHhc
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DM-DEIRK 526 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~-~~~r~ 526 (1723)
.+.++||.|+|+ ++++++|+||+|++|||+||+|||||||||++.|++|+.+|++|+|.++|.|++. ++ .+.|.
T Consensus 4 ~L~a~~l~K~y~----kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArl 79 (243)
T COG1137 4 TLVAENLAKSYK----KRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARL 79 (243)
T ss_pred EEEehhhhHhhC----CeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhc
Confidence 588999999995 4579999999999999999999999999999999999999999999999999985 33 45678
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHH--HHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCc
Q 000284 527 GLGVCPQYDILFPELTVREHLEMFAVLKGVKEE--LLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSK 604 (1723)
Q Consensus 527 ~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~--~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~ 604 (1723)
.|||+||++..|..|||+|||....+.+..+.+ +.+.+++++|+++++.+.++++..+||||||||+.|||||+.+|+
T Consensus 80 GigYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hlr~~~a~sLSGGERRR~EIARaLa~~P~ 159 (243)
T COG1137 80 GIGYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHLRDSKAYSLSGGERRRVEIARALAANPK 159 (243)
T ss_pred CcccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHHhcCcccccccchHHHHHHHHHHhcCCC
Confidence 999999999999999999999988887765544 445568899999999999999999999999999999999999999
Q ss_pred EeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 605 VVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 605 vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
+++||||++|+||.+...+.++++.++ .|..|++|.|+..|...+|||.+||++|++.+.|+|+++-+
T Consensus 160 fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~ 228 (243)
T COG1137 160 FILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVN 228 (243)
T ss_pred EEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhc
Confidence 999999999999999999999999998 48999999999999999999999999999999999988754
No 70
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-46 Score=442.25 Aligned_cols=223 Identities=30% Similarity=0.511 Sum_probs=208.1
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1432 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~ 1432 (1723)
..++++||+|.|+ +..||+|+||+|++||+++||||+|||||||||||+|+..|++|+|.++|+++..-+. .+
T Consensus 4 ~~l~i~~v~k~yg------~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp-~k 76 (352)
T COG3842 4 PALEIRNVSKSFG------DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPP-EK 76 (352)
T ss_pred ceEEEEeeeeecC------CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCh-hh
Confidence 5799999999996 4679999999999999999999999999999999999999999999999999987443 46
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcC-CChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000284 1433 RLIGYCPQFDALLEYLTVQEHLELYARIKG-VAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1511 (1723)
Q Consensus 1433 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~ 1511 (1723)
|.||+|+|+.+|||+|||+||+.|..+.++ .+++++++++.++|+.++|.+++++++.+|||||||||+|||||+.+|+
T Consensus 77 R~ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p~qLSGGQqQRVALARAL~~~P~ 156 (352)
T COG3842 77 RPIGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKPHQLSGGQQQRVALARALVPEPK 156 (352)
T ss_pred cccceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhChhhhChHHHHHHHHHHHhhcCcc
Confidence 779999999999999999999999988655 4446688999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000284 1512 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1583 (1723)
Q Consensus 1512 vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~ 1583 (1723)
|||||||.++||..-|..+..-|+++.++.| .|.|++|||-+|+..++|||++|++|+|...|+|+++..+
T Consensus 157 vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~g-iT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~ 227 (352)
T COG3842 157 VLLLDEPLSALDAKLREQMRKELKELQRELG-ITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYER 227 (352)
T ss_pred hhhhcCcccchhHHHHHHHHHHHHHHHHhcC-CeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhC
Confidence 9999999999999999999999999987665 7899999999999999999999999999999999998654
No 71
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-46 Score=412.98 Aligned_cols=206 Identities=29% Similarity=0.479 Sum_probs=193.2
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1432 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~ 1432 (1723)
..+++++++|.|++ ..||+|+||+|++||+++|+||+|||||||+|+|+|+.+|++|+|.++|..+.. ..
T Consensus 2 ~~l~i~~v~~~f~~------~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~----p~ 71 (248)
T COG1116 2 ALLEIEGVSKSFGG------VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTG----PG 71 (248)
T ss_pred ceEEEEeeEEEeCc------eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCC----CC
Confidence 36899999999963 679999999999999999999999999999999999999999999999998843 24
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCE
Q 000284 1433 RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPI 1512 (1723)
Q Consensus 1433 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~v 1512 (1723)
..+|||+|++.|+|.+||+||+.+.....|.++++.++++.++|+.+||.+..++++++|||||||||+|||||+.+|+|
T Consensus 72 ~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P~qLSGGMrQRVaiARAL~~~P~l 151 (248)
T COG1116 72 PDIGYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYPHQLSGGMRQRVAIARALATRPKL 151 (248)
T ss_pred CCEEEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCccccChHHHHHHHHHHHHhcCCCE
Confidence 56999999999999999999999999988888777788999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECC
Q 000284 1513 VILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGG 1569 (1723)
Q Consensus 1513 llLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G 1569 (1723)
|+||||+++||+.+|..+++.+.++.++.+ .||+++|||.+||-.++|||++|.++
T Consensus 152 LLlDEPFgALDalTR~~lq~~l~~lw~~~~-~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 152 LLLDEPFGALDALTREELQDELLRLWEETR-KTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred EEEcCCcchhhHHHHHHHHHHHHHHHHhhC-CEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 999999999999999999999999986665 69999999999999999999999984
No 72
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=6e-42 Score=474.89 Aligned_cols=217 Identities=28% Similarity=0.426 Sum_probs=196.1
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCC---CCcceEEEccccCCccHHHH
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP---PTTGDALVFGKNITADMDEI 524 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~---p~~G~i~i~g~~i~~~~~~~ 524 (1723)
..++++||++.|+.+++.+.+|+|+|+++++||+++|+||||||||||+++|+|+.+ |++|+|.++|+++.. ..
T Consensus 758 ~~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~---~~ 834 (1394)
T TIGR00956 758 DIFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS---SF 834 (1394)
T ss_pred ceEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh---hh
Confidence 358999999999754445679999999999999999999999999999999999998 789999999998752 46
Q ss_pred hcceEEEccCCCCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCCcccccccC----CCChhHHHHHHHHH
Q 000284 525 RKGLGVCPQYDILFPELTVREHLEMFAVLKG---VKEELLESVVAEMVDEVGLADKVNIVVR----ALSGGMKRKLSLGI 597 (1723)
Q Consensus 525 r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g---~~~~~~~~~v~~~l~~~~l~~~~~~~~~----~LSgGqkqrl~lA~ 597 (1723)
|+.+|||+|++.+++.+||+|||.+.+.++. .+.++.+++++++++.+||.+..|+.++ .|||||||||+||+
T Consensus 835 ~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~~LSgGqrqRl~Ia~ 914 (1394)
T TIGR00956 835 QRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPGEGLNVEQRKRLTIGV 914 (1394)
T ss_pred hcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCCCCCCHHHhhHHHHHH
Confidence 7889999999999999999999999887763 4455667789999999999998999887 79999999999999
Q ss_pred HHhcCCc-EeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHH-HHhhcCEEEEEeCC-EEEEecCH
Q 000284 598 ALIGDSK-VVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDE-AEELGDRIAIMANG-SLKCCGSS 667 (1723)
Q Consensus 598 al~~~p~-vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e-~~~l~dri~il~~G-~l~~~Gs~ 667 (1723)
||+.+|+ ||+|||||+|||+.+++.++++|++++ +|+|||+|||+++. +...+||+++|++| +++..|++
T Consensus 915 aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~ 988 (1394)
T TIGR00956 915 ELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDL 988 (1394)
T ss_pred HHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCc
Confidence 9999997 999999999999999999999999985 68999999999986 45679999999997 99999986
No 73
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1e-45 Score=443.18 Aligned_cols=224 Identities=31% Similarity=0.456 Sum_probs=205.9
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc----cHHHH
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA----DMDEI 524 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~----~~~~~ 524 (1723)
+|+++||+|.|+++++.+.+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +....
T Consensus 1 mI~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~ 80 (343)
T TIGR02314 1 MIKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKA 80 (343)
T ss_pred CEEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 37899999999643223579999999999999999999999999999999999999999999999999853 22346
Q ss_pred hcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCc
Q 000284 525 RKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSK 604 (1723)
Q Consensus 525 r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~ 604 (1723)
|++|||+||++.+++.+||+||+.+.....+.++++.++++.++++.+||.+..++++.+|||||||||+|||||+.+|+
T Consensus 81 r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~~~~LSgGqkQRV~IARAL~~~P~ 160 (343)
T TIGR02314 81 RRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSYPSNLSGGQKQRVAIARALASNPK 160 (343)
T ss_pred hcCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHHhCCC
Confidence 88999999999999999999999998877777777888899999999999999999999999999999999999999999
Q ss_pred EeeccCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 605 VVILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 605 vliLDEPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
+|||||||++|||.+++.++++|+++++ |.|||++||+|+++..+||||++|++|++++.|++.++..
T Consensus 161 iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 161 VLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 9999999999999999999999999853 8999999999999999999999999999999999877643
No 74
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=3.2e-46 Score=420.84 Aligned_cols=221 Identities=30% Similarity=0.470 Sum_probs=199.3
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhc
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAAR 1432 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~~ 1432 (1723)
+++++||+..|+ ++.+++|+||+|++||+++|+||||||||||+|+|+|+++|.+|+|+++|+++.+ ..+++.
T Consensus 2 ~L~~~~ls~~y~------~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelA 75 (258)
T COG1120 2 MLEVENLSFGYG------GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELA 75 (258)
T ss_pred eeEEEEEEEEEC------CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHh
Confidence 589999999996 3679999999999999999999999999999999999999999999999999977 567788
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHH----HcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhc
Q 000284 1433 RLIGYCPQFDALLEYLTVQEHLELYAR----IKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIG 1508 (1723)
Q Consensus 1433 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~----~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~ 1508 (1723)
+++||+||.+.....+||+|-+.+... ..+...++.++.+.+.|+.+|+.+.++|.+.+||||||||+.|||||++
T Consensus 76 k~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~~~LSGGerQrv~iArALaQ 155 (258)
T COG1120 76 KKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPVDELSGGERQRVLIARALAQ 155 (258)
T ss_pred hhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcccccChhHHHHHHHHHHHhc
Confidence 899999999877778999998876422 1122233344578899999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000284 1509 DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1581 (1723)
Q Consensus 1509 ~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~ 1581 (1723)
+|++|+|||||++||+..+.+++++++++++++| .|||+++||++.+.++|||+++|++|++++.|+|+++.
T Consensus 156 ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~-~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 156 ETPILLLDEPTSHLDIAHQIEVLELLRDLNREKG-LTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred CCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 9999999999999999999999999999986655 68999999999999999999999999999999987654
No 75
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.8e-45 Score=441.07 Aligned_cols=226 Identities=27% Similarity=0.466 Sum_probs=205.1
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h---H
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P---K 1429 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-~---~ 1429 (1723)
+|+++||+|+|+++. +.+.+|+|+||+|++||++||+||||||||||+|+|+|+++|++|+|.++|.++... . .
T Consensus 1 mI~~~~lsk~y~~~~--~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~ 78 (343)
T TIGR02314 1 MIKLSNITKVFHQGT--KTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELT 78 (343)
T ss_pred CEEEEEEEEEECCCC--cceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHH
Confidence 488999999996321 134699999999999999999999999999999999999999999999999998652 2 2
Q ss_pred HhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000284 1430 AARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1509 (1723)
Q Consensus 1430 ~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~ 1509 (1723)
..|++|||+||+..+++.+||+||+.+.....+.++.+.++++.++++.+||.+..++++.+|||||||||+|||||+.+
T Consensus 79 ~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~~~~LSgGqkQRV~IARAL~~~ 158 (343)
T TIGR02314 79 KARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSYPSNLSGGQKQRVAIARALASN 158 (343)
T ss_pred HHhcCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHHhC
Confidence 35788999999999999999999999877777777767778889999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1510 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1510 p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
|++|||||||+||||.+++.++++|++++++.| .|||++||+|+++.++||||++|++|++++.|+++++..
T Consensus 159 P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g-~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 159 PKVLLCDEATSALDPATTQSILELLKEINRRLG-LTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 999999999999999999999999999975445 689999999999999999999999999999999988854
No 76
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-46 Score=417.11 Aligned_cols=226 Identities=26% Similarity=0.442 Sum_probs=206.2
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccc---cCCccHHHHh
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGK---NITADMDEIR 525 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~---~i~~~~~~~r 525 (1723)
.|+++|++|.|++ ..|++|+|++|+.||.++|+|||||||||||++|+|+..|++|+|.++|. |.+. .....
T Consensus 2 ~i~i~~~~~~~~~----~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~-~~~~~ 76 (345)
T COG1118 2 SIRINNVKKRFGA----FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSN-LAVRD 76 (345)
T ss_pred ceeehhhhhhccc----ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhc-cchhh
Confidence 4789999999954 56999999999999999999999999999999999999999999999999 6543 23334
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCC
Q 000284 526 KGLGVCPQYDILFPELTVREHLEMFAVLKG--VKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDS 603 (1723)
Q Consensus 526 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g--~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p 603 (1723)
++||+++||..||++|||.||++|+.+.+. .++.+++.++.++|+.++|+...++++.+||||||||++|||||+.+|
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP~QLSGGQrQRVALARALA~eP 156 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYPAQLSGGQRQRVALARALAVEP 156 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCchhcChHHHHHHHHHHHhhcCC
Confidence 789999999999999999999999987663 345678899999999999999999999999999999999999999999
Q ss_pred cEeeccCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhhhCCcEE
Q 000284 604 KVVILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGVGYT 679 (1723)
Q Consensus 604 ~vliLDEPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~g~gy~ 679 (1723)
+||+||||+++||+.-|.++...|+++.+ |.|++++|||.+|+.++||||++|++|+|...|++.+.-...+.-+.
T Consensus 157 ~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~~P~s~fV 234 (345)
T COG1118 157 KVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYDHPASRFV 234 (345)
T ss_pred CeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhcCCCccce
Confidence 99999999999999999999999999863 89999999999999999999999999999999999998766655443
No 77
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=4e-41 Score=464.16 Aligned_cols=217 Identities=24% Similarity=0.386 Sum_probs=191.9
Q ss_pred eEEEEeEEEEecCcC---------CccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCC--CcceEEEccccC
Q 000284 449 CIQIRKLHKVYATKR---------GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP--TTGDALVFGKNI 517 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~---------~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p--~~G~i~i~g~~i 517 (1723)
.+..+||+...+.+. +.+.+|+|+|+++++||+++|+||||||||||+++|+|..++ ++|+|.++|++.
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 589999998875321 235799999999999999999999999999999999999874 789999999876
Q ss_pred CccHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCccccccc-----CCCChhH
Q 000284 518 TADMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLK---GVKEELLESVVAEMVDEVGLADKVNIVV-----RALSGGM 589 (1723)
Q Consensus 518 ~~~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~---g~~~~~~~~~v~~~l~~~~l~~~~~~~~-----~~LSgGq 589 (1723)
.. ...++.+|||+|++.+++.+||+|||.+.+.++ ..+.++.+++++++++.+||.+..|+.+ +.|||||
T Consensus 947 ~~--~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGe 1024 (1470)
T PLN03140 947 KQ--ETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQ 1024 (1470)
T ss_pred Ch--HHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHH
Confidence 42 245678999999999999999999999987654 2344555678999999999998888886 5899999
Q ss_pred HHHHHHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHH-HHHhhcCEEEEEeC-CEEEEecC
Q 000284 590 KRKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMD-EAEELGDRIAIMAN-GSLKCCGS 666 (1723)
Q Consensus 590 kqrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~-e~~~l~dri~il~~-G~l~~~Gs 666 (1723)
||||+||+||+.+|++|+|||||+|||+.++..++++|++++ +|+|||+|||+++ ++..++||+++|++ |++++.|+
T Consensus 1025 rkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~ 1104 (1470)
T PLN03140 1025 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGP 1104 (1470)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECC
Confidence 999999999999999999999999999999999999999986 5899999999998 57789999999996 89999998
Q ss_pred H
Q 000284 667 S 667 (1723)
Q Consensus 667 ~ 667 (1723)
+
T Consensus 1105 ~ 1105 (1470)
T PLN03140 1105 L 1105 (1470)
T ss_pred c
Confidence 5
No 78
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.8e-46 Score=400.80 Aligned_cols=224 Identities=27% Similarity=0.449 Sum_probs=204.9
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC----h
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD----P 1428 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~----~ 1428 (1723)
.+|+++||+|.|++ ++.+|+||||+|++||+++|+|++|||||||+|+|.|+..|++|+|.++|.++... .
T Consensus 2 ~~i~~~nl~k~yp~-----~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~l 76 (258)
T COG3638 2 MMIEVKNLSKTYPG-----GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKEL 76 (258)
T ss_pred ceEEEeeeeeecCC-----CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHH
Confidence 47999999999974 46799999999999999999999999999999999999999999999999988652 3
Q ss_pred HHhccceEEEecCCCCCCCCCHHHHHHHHH--------HHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHH
Q 000284 1429 KAARRLIGYCPQFDALLEYLTVQEHLELYA--------RIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKL 1500 (1723)
Q Consensus 1429 ~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~--------~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl 1500 (1723)
.+.|++|||++|.+.|.+.+||.+|+..+. .+-|+..++.+..+.+.|+++|+.+++.+++++|||||||||
T Consensus 77 r~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra~~LSGGQQQRV 156 (258)
T COG3638 77 RKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRASTLSGGQQQRV 156 (258)
T ss_pred HHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHhccCCcchhHHH
Confidence 457889999999999999999999987632 234666566677888999999999999999999999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000284 1501 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1580 (1723)
Q Consensus 1501 ~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l 1580 (1723)
+|||||+.+|+++|.|||+++|||.+.+.+++.|++++++.| .|||++.|+++.+.++||||+-|++|+++.+|+++++
T Consensus 157 aIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g-~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~~el 235 (258)
T COG3638 157 AIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDG-ITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPASEL 235 (258)
T ss_pred HHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcC-CEEEEEechHHHHHHHHhhheEecCCcEEEeCChhhh
Confidence 999999999999999999999999999999999999987776 6899999999999999999999999999999999886
Q ss_pred Hh
Q 000284 1581 KT 1582 (1723)
Q Consensus 1581 ~~ 1582 (1723)
..
T Consensus 236 ~~ 237 (258)
T COG3638 236 TD 237 (258)
T ss_pred hH
Confidence 54
No 79
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-46 Score=416.14 Aligned_cols=231 Identities=31% Similarity=0.479 Sum_probs=212.8
Q ss_pred ceEEEEeEEEEecCc--------------------CCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCc
Q 000284 448 RCIQIRKLHKVYATK--------------------RGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTT 507 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~--------------------~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~ 507 (1723)
..|+++||+|.|+.+ .+....++|+||+|++|||++|+|-+|||||||+++|.++++||+
T Consensus 3 ~~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~ 82 (386)
T COG4175 3 VKIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTR 82 (386)
T ss_pred ceEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCC
Confidence 358999999999752 123457899999999999999999999999999999999999999
Q ss_pred ceEEEccccCCc----cHHHH-hcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCccccccc
Q 000284 508 GDALVFGKNITA----DMDEI-RKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVV 582 (1723)
Q Consensus 508 G~i~i~g~~i~~----~~~~~-r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~ 582 (1723)
|+|.++|.|+.+ ...+. |+++++|+|+..|+|+.||.||..|+.+++|+++++.++++.+.|+.+||....++++
T Consensus 83 G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp 162 (386)
T COG4175 83 GEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYP 162 (386)
T ss_pred ceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCc
Confidence 999999999853 33444 4779999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCE
Q 000284 583 RALSGGMKRKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGS 660 (1723)
Q Consensus 583 ~~LSgGqkqrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~ 660 (1723)
++|||||||||.|||||+.+|+||++|||+|+|||--|.++.+-|.++.+ .+||+++|||+|||.+++|||+||++|+
T Consensus 163 ~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~rIaimkdG~ 242 (386)
T COG4175 163 NELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIGDRIAIMKDGE 242 (386)
T ss_pred ccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhccceEEEecCCe
Confidence 99999999999999999999999999999999999999999999998853 7999999999999999999999999999
Q ss_pred EEEecCHHHHHhhhCCcE
Q 000284 661 LKCCGSSLFLKHQYGVGY 678 (1723)
Q Consensus 661 l~~~Gs~~~Lk~~~g~gy 678 (1723)
++.+|+|+++-......|
T Consensus 243 ivQ~Gtp~eIl~~PAndY 260 (386)
T COG4175 243 IVQVGTPEEILLNPANDY 260 (386)
T ss_pred EEEeCCHHHHHcCccHHH
Confidence 999999999876554444
No 80
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.8e-46 Score=413.29 Aligned_cols=226 Identities=26% Similarity=0.445 Sum_probs=205.0
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCe---eCCCChHH
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGK---DIRSDPKA 1430 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~---~i~~~~~~ 1430 (1723)
+|++++++|.|+ ...|++|||++|+.||.+||+||||||||||+|+|+|++.|++|+|.++|+ |.+. ...
T Consensus 2 ~i~i~~~~~~~~------~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~-~~~ 74 (345)
T COG1118 2 SIRINNVKKRFG------AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSN-LAV 74 (345)
T ss_pred ceeehhhhhhcc------cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhc-cch
Confidence 578999999995 467999999999999999999999999999999999999999999999999 6544 223
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHcCC--ChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhc
Q 000284 1431 ARRLIGYCPQFDALLEYLTVQEHLELYARIKGV--AEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIG 1508 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~--~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~ 1508 (1723)
..++|||++|+.+||+.|||.+|+.|..+.+.. ++.+++.++.++|+.+.|+..+++++.+|||||||||++||||+-
T Consensus 75 ~~R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP~QLSGGQrQRVALARALA~ 154 (345)
T COG1118 75 RDRKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYPAQLSGGQRQRVALARALAV 154 (345)
T ss_pred hhcceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCchhcChHHHHHHHHHHHhhc
Confidence 346799999999999999999999998876532 345678899999999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhcCCe
Q 000284 1509 DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNF 1587 (1723)
Q Consensus 1509 ~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~~~~~ 1587 (1723)
+|++|+||||+++||..-|.++...|+++..+-| .|.+++|||++|+.++||||++|++|+|...|+++++...-...
T Consensus 155 eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~-~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~~P~s~ 232 (345)
T COG1118 155 EPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLG-VTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYDHPASR 232 (345)
T ss_pred CCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhC-ceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhcCCCcc
Confidence 9999999999999999999999999999976555 68999999999999999999999999999999999997665443
No 81
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-45 Score=415.74 Aligned_cols=223 Identities=30% Similarity=0.477 Sum_probs=208.8
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCC--ccHHHHh
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNIT--ADMDEIR 525 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~--~~~~~~r 525 (1723)
..++++++++.|+++ ..+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+..++|
T Consensus 2 ~~i~~~~l~~~y~~~---~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~ 78 (235)
T COG1122 2 RMIEAENLSFRYPGR---KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELR 78 (235)
T ss_pred ceEEEEEEEEEcCCC---ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhh
Confidence 368899999999754 57999999999999999999999999999999999999999999999999986 5677899
Q ss_pred cceEEEccCCC-CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCc
Q 000284 526 KGLGVCPQYDI-LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSK 604 (1723)
Q Consensus 526 ~~ig~~~Q~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~ 604 (1723)
+++|+|+|+|. .+-.-||.|.++|+....|++.++++++++++++.+|+.+.+++++.+|||||||||+||.+|+.+|+
T Consensus 79 ~~vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p~~LSGGqkqRvaIA~vLa~~P~ 158 (235)
T COG1122 79 QKVGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPPFNLSGGQKQRVAIAGVLAMGPE 158 (235)
T ss_pred cceEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCccccCCcceeeHHhhHHHHcCCC
Confidence 99999999983 44456999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeccCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000284 605 VVILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 673 (1723)
Q Consensus 605 vliLDEPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~ 673 (1723)
+||||||||||||.++++++++++++++ |+|||++|||++++..+|||+++|++|+++.+|+|.++.+.
T Consensus 159 iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 159 ILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred EEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 9999999999999999999999999963 68999999999999999999999999999999998776543
No 82
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-45 Score=412.53 Aligned_cols=218 Identities=30% Similarity=0.453 Sum_probs=190.2
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1432 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~ 1432 (1723)
.+|+++||++.|++ . +||+||||+|++||+++|+||||||||||+|+|.|+++|++|+|.++|+++..... +
T Consensus 3 ~~i~v~nl~v~y~~-----~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~--~ 74 (254)
T COG1121 3 PMIEVENLTVSYGN-----R-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK--R 74 (254)
T ss_pred cEEEEeeeEEEECC-----E-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc--C
Confidence 57999999999963 2 59999999999999999999999999999999999999999999999998754322 4
Q ss_pred cceEEEecCC---CCCCCCCHHHHHHHHHHHc----CCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHH
Q 000284 1433 RLIGYCPQFD---ALLEYLTVQEHLELYARIK----GVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIA 1505 (1723)
Q Consensus 1433 ~~ig~~pQ~~---~l~~~lTv~e~l~~~~~~~----g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~a 1505 (1723)
.+||||||.. .-|| +||+|-+.+....+ +...++.++.++++|+++|+.+++++++++|||||+||+.||||
T Consensus 75 ~~IgYVPQ~~~~d~~fP-~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~i~~LSGGQ~QRV~lARA 153 (254)
T COG1121 75 LRIGYVPQKSSVDRSFP-ITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDRQIGELSGGQKQRVLLARA 153 (254)
T ss_pred CeEEEcCcccccCCCCC-cCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCCcccccCcHHHHHHHHHHH
Confidence 6799999953 3344 79999988742211 12223346789999999999999999999999999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1506 MIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1506 l~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
|+.+|++|+|||||+|+|+.++..+.++|++++++ | +||+++|||++.+.++||||+.|+ +++.|.|++++..+
T Consensus 154 L~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e-g-~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~~~ 227 (254)
T COG1121 154 LAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE-G-KTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEVLT 227 (254)
T ss_pred hccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC-C-CEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhccC
Confidence 99999999999999999999999999999999754 5 699999999999999999999985 68999999987643
No 83
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9e-46 Score=404.20 Aligned_cols=222 Identities=30% Similarity=0.483 Sum_probs=203.3
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc--cHHHHh
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA--DMDEIR 525 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~--~~~~~r 525 (1723)
..+++++|+|+| |..+||+|+||++++|||++|+|||||||||++|+|+|.++||+|+|.++|+||+. .....|
T Consensus 3 ~lL~v~~l~k~F----GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar 78 (250)
T COG0411 3 PLLEVRGLSKRF----GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIAR 78 (250)
T ss_pred ceeeeccceeec----CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHh
Confidence 357899999999 45789999999999999999999999999999999999999999999999999975 334467
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcC------------CCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHH
Q 000284 526 KGLGVCPQYDILFPELTVREHLEMFAVLKG------------VKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKL 593 (1723)
Q Consensus 526 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g------------~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl 593 (1723)
..|+--+|...+|++|||.||+......+. ...++..+++.++|+.+||.+..++++++||+||||||
T Consensus 79 ~Gi~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~~LsyG~qR~L 158 (250)
T COG0411 79 LGIARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAGNLSYGQQRRL 158 (250)
T ss_pred ccceeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhhcCChhHhHHH
Confidence 889999999999999999999988654221 13467788899999999999999999999999999999
Q ss_pred HHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 594 SLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 594 ~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
.|||||+.+|++|+||||.+||.|....++.++|+++++ |.||+++.|||+.+..+||||+||+.|+++++|+|++..
T Consensus 159 EIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~eV~ 238 (250)
T COG0411 159 EIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPEEVR 238 (250)
T ss_pred HHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHHHHh
Confidence 999999999999999999999999999999999999974 699999999999999999999999999999999998876
Q ss_pred hh
Q 000284 672 HQ 673 (1723)
Q Consensus 672 ~~ 673 (1723)
+.
T Consensus 239 ~d 240 (250)
T COG0411 239 NN 240 (250)
T ss_pred cC
Confidence 53
No 84
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.2e-45 Score=384.74 Aligned_cols=214 Identities=27% Similarity=0.442 Sum_probs=203.9
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc----cHHHH
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA----DMDEI 524 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~----~~~~~ 524 (1723)
+|+++||+|.|++. ..||+|+||+|++||++.|+||+||||||++++|.+..+||+|+|.++|+|+.. +..-+
T Consensus 1 mI~f~~V~k~Y~~g---~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~L 77 (223)
T COG2884 1 MIRFENVSKAYPGG---REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFL 77 (223)
T ss_pred CeeehhhhhhcCCC---chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchh
Confidence 48899999999753 579999999999999999999999999999999999999999999999999853 55678
Q ss_pred hcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCc
Q 000284 525 RKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSK 604 (1723)
Q Consensus 525 r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~ 604 (1723)
|++||+|+|+..|.+++||+||++|..++.|.+++++++++.++|+.+||.++.+..+.+||||||||++||||++.+|+
T Consensus 78 RR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~~LSGGEQQRvaIARAiV~~P~ 157 (223)
T COG2884 78 RRQIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPSQLSGGEQQRVAIARAIVNQPA 157 (223)
T ss_pred hheeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCccccCchHHHHHHHHHHHccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEec
Q 000284 605 VVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 665 (1723)
Q Consensus 605 vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~G 665 (1723)
+||-||||.+|||....++++++.++. .|.|||+.|||.+.++.+--|++.+++|+++...
T Consensus 158 vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 158 VLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred eEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 999999999999999999999999996 5999999999999999999999999999997543
No 85
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-45 Score=399.07 Aligned_cols=226 Identities=28% Similarity=0.482 Sum_probs=203.0
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC--ChHH
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS--DPKA 1430 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~--~~~~ 1430 (1723)
.+|+++||++.|+++. ....||++|||+|.+||++||+|++|||||||.++|+|+.+|++|+|.++|.++.. ..+.
T Consensus 2 ~~l~v~nl~~~y~~~~--~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~ 79 (252)
T COG1124 2 TLLSVRNLSIVYGGGK--FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKA 79 (252)
T ss_pred ceEEEeceEEEecCCc--chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchh
Confidence 4799999999997643 12369999999999999999999999999999999999999999999999987654 2235
Q ss_pred hccceEEEecCC--CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHHHh
Q 000284 1431 ARRLIGYCPQFD--ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIAMI 1507 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~kqrl~iA~al~ 1507 (1723)
.++.|.+|+||+ +|.|..||++.|.-.....|.++.+ +++.++|+.+||. ..+++++.+|||||+||+||||||+
T Consensus 80 ~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~--~~i~~~L~~VgL~~~~l~R~P~eLSGGQ~QRiaIARAL~ 157 (252)
T COG1124 80 FYRPVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQ--QRIAELLDQVGLPPSFLDRRPHELSGGQRQRIAIARALI 157 (252)
T ss_pred hccceeEEecCCccccCcchhHHHHHhhhhccCCccHHH--HHHHHHHHHcCCCHHHHhcCchhcChhHHHHHHHHHHhc
Confidence 677899999996 7899999999998777777776543 4588999999996 5799999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000284 1508 GDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1583 (1723)
Q Consensus 1508 ~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~ 1583 (1723)
-+|++||||||||+||+..+.++|+++.+++++.+ .|.|++|||+..++.+||||+||++|++++.++.+++.+.
T Consensus 158 ~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~-lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~ 232 (252)
T COG1124 158 PEPKLLILDEPTSALDVSVQAQILNLLLELKKERG-LTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSH 232 (252)
T ss_pred cCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcC-ceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcC
Confidence 99999999999999999999999999999976654 7999999999999999999999999999999999998765
No 86
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=8.6e-45 Score=401.68 Aligned_cols=214 Identities=30% Similarity=0.483 Sum_probs=192.3
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCCh----H
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDP----K 1429 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~----~ 1429 (1723)
+++++||+|.|+.+.. ...||+++||+|++||+++|+||+||||||||++|.|+.+||+|.|+++|.++.... .
T Consensus 1 ~i~~~~v~k~y~~~~~--~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~ 78 (226)
T COG1136 1 MIELKNVSKIYGLGGE--KVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELA 78 (226)
T ss_pred CcEEeeeEEEeccCCc--ceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHH
Confidence 3679999999976432 257999999999999999999999999999999999999999999999999987522 2
Q ss_pred H-hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccC-CCCCCCChhHHHHHHHHHHHh
Q 000284 1430 A-ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAK-KPSFTLSGGNKRKLSVAIAMI 1507 (1723)
Q Consensus 1430 ~-~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~LSgG~kqrl~iA~al~ 1507 (1723)
. .+++|||++|+..|.+.+||+||+.+...+.+.+....++.+.++++.+||.+..+ +++.+|||||||||+|||||+
T Consensus 79 ~~R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAIARAL~ 158 (226)
T COG1136 79 KLRRKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKPSELSGGQQQRVAIARALI 158 (226)
T ss_pred HHHHHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCchhcCHHHHHHHHHHHHHh
Confidence 2 35679999999999999999999999888888876556778888999999997766 889999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEE
Q 000284 1508 GDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQL 1571 (1723)
Q Consensus 1508 ~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l 1571 (1723)
.+|++|+.||||.+||..+.+.+++++++++++.| +|||++|||.+.+. .|||++.|.+|++
T Consensus 159 ~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g-~tii~VTHd~~lA~-~~dr~i~l~dG~~ 220 (226)
T COG1136 159 NNPKIILADEPTGNLDSKTAKEVLELLRELNKERG-KTIIMVTHDPELAK-YADRVIELKDGKI 220 (226)
T ss_pred cCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcC-CEEEEEcCCHHHHH-hCCEEEEEeCCee
Confidence 99999999999999999999999999999976655 68999999988776 7999999999994
No 87
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=4.4e-45 Score=411.69 Aligned_cols=228 Identities=27% Similarity=0.437 Sum_probs=204.9
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhcc
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 527 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 527 (1723)
.++++||+..|+ ++.+++|+||++++||+++|+||||||||||+|+|+|+++|.+|+|+++|+++.+ ...++.+.
T Consensus 2 ~L~~~~ls~~y~----~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ 77 (258)
T COG1120 2 MLEVENLSFGYG----GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKK 77 (258)
T ss_pred eeEEEEEEEEEC----CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhh
Confidence 588999999995 4579999999999999999999999999999999999999999999999999965 66778899
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHh--c--CCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCC
Q 000284 528 LGVCPQYDILFPELTVREHLEMFAVL--K--GVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDS 603 (1723)
Q Consensus 528 ig~~~Q~~~l~~~lTv~e~l~~~~~~--~--g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p 603 (1723)
+||+||.+.....+||+|-+.++..- . +...++.++.++++|+.+|+.+..++.+.+||||||||+.|||||+++|
T Consensus 78 ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~~~LSGGerQrv~iArALaQ~~ 157 (258)
T COG1120 78 LAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPVDELSGGERQRVLIARALAQET 157 (258)
T ss_pred EEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcccccChhHHHHHHHHHHHhcCC
Confidence 99999999888889999999876432 1 2223444557999999999999999999999999999999999999999
Q ss_pred cEeeccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHH------HHHhhhC
Q 000284 604 KVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSL------FLKHQYG 675 (1723)
Q Consensus 604 ~vliLDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~------~Lk~~~g 675 (1723)
++|+|||||++||....-+++++++++. +|+|||+++||++.|.++|||+++|++|++.+.|+|. .|++-||
T Consensus 158 ~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evlT~e~l~~Vyg 237 (258)
T COG1120 158 PILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVLTEENLREVYG 237 (258)
T ss_pred CEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhcCHHHHHHHhC
Confidence 9999999999999999999999999986 4899999999999999999999999999999999975 4667777
Q ss_pred CcEEE
Q 000284 676 VGYTL 680 (1723)
Q Consensus 676 ~gy~l 680 (1723)
.....
T Consensus 238 v~~~~ 242 (258)
T COG1120 238 VDADV 242 (258)
T ss_pred CceEE
Confidence 66543
No 88
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=7.2e-45 Score=402.33 Aligned_cols=211 Identities=28% Similarity=0.555 Sum_probs=193.6
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc----cHHHH-
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA----DMDEI- 524 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~----~~~~~- 524 (1723)
++++||+|.|..+.....||+++||+|++||+++|+||+||||||||++|.|+.+||+|+|.++|.|+.. .....
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 6799999999865445689999999999999999999999999999999999999999999999999863 23344
Q ss_pred hcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccc-cccCCCChhHHHHHHHHHHHhcCC
Q 000284 525 RKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVN-IVVRALSGGMKRKLSLGIALIGDS 603 (1723)
Q Consensus 525 r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~-~~~~~LSgGqkqrl~lA~al~~~p 603 (1723)
|++|||++|+..|.+.+||.||+.+...+.+.+....+++++++++.+||.+..+ +++.+|||||||||+|||||+.+|
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAIARAL~~~P 161 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKPSELSGGQQQRVAIARALINNP 161 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCchhcCHHHHHHHHHHHHHhcCC
Confidence 4779999999999999999999999998888876667788999999999997766 889999999999999999999999
Q ss_pred cEeeccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEE
Q 000284 604 KVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSL 661 (1723)
Q Consensus 604 ~vliLDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l 661 (1723)
++++.||||.+||..+.+.++++++++. .|+|||++|||.+.|. .|||++.|.+|++
T Consensus 162 ~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~-~~dr~i~l~dG~~ 220 (226)
T COG1136 162 KIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAK-YADRVIELKDGKI 220 (226)
T ss_pred CeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHH-hCCEEEEEeCCee
Confidence 9999999999999999999999999984 4899999999999997 6999999999994
No 89
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-44 Score=436.21 Aligned_cols=224 Identities=29% Similarity=0.449 Sum_probs=206.5
Q ss_pred cceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHh
Q 000284 1352 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAA 1431 (1723)
Q Consensus 1352 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~ 1431 (1723)
.++|+++||+|.|++ +.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+ ..
T Consensus 4 ~~~l~~~~l~~~~~~------~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~-~~ 76 (351)
T PRK11432 4 KNFVVLKNITKRFGS------NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRS-IQ 76 (351)
T ss_pred CcEEEEEeEEEEECC------eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCC-HH
Confidence 357999999999963 46999999999999999999999999999999999999999999999999986533 23
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000284 1432 RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1511 (1723)
Q Consensus 1432 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~ 1511 (1723)
+++||||||+..+|+.+||+||+.+..+.++.++.+.++++.++++.++|.+..++++.+|||||||||+|||||+.+|+
T Consensus 77 ~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~~~~LSgGq~QRVaLARaL~~~P~ 156 (351)
T PRK11432 77 QRDICMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRYVDQISGGQQQRVALARALILKPK 156 (351)
T ss_pred HCCEEEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999998877777777777889999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000284 1512 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1583 (1723)
Q Consensus 1512 vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~ 1583 (1723)
+|||||||+|||+.+|+.+++.|+++.++.| +|+|++|||++|+..+||||++|++|+++..|+++++.++
T Consensus 157 lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g-~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~ 227 (351)
T PRK11432 157 VLLFDEPLSNLDANLRRSMREKIRELQQQFN-ITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQ 227 (351)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999965444 6899999999999999999999999999999999998654
No 90
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-45 Score=389.83 Aligned_cols=219 Identities=30% Similarity=0.467 Sum_probs=204.9
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCc-----ceEEEccccCCc---
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTT-----GDALVFGKNITA--- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~-----G~i~i~g~~i~~--- 519 (1723)
..++++||++.|+ .+.||+|||++|++++|+||+||+||||||+|+++..+....+ |+|.++|+||..
T Consensus 6 ~~~~~~~l~~yYg----~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~ 81 (253)
T COG1117 6 PAIEVRDLNLYYG----DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKV 81 (253)
T ss_pred ceeEecceeEEEC----chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCC
Confidence 5799999999995 4579999999999999999999999999999999999988764 999999999964
Q ss_pred cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHHH
Q 000284 520 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLSL 595 (1723)
Q Consensus 520 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~----~~~~~~~~~LSgGqkqrl~l 595 (1723)
+..++|++||+|+|.|.-|| +|++||+.++.++.|...+++++.|++.|+...|- +.+++.+..|||||||||||
T Consensus 82 d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKDrL~~sa~~LSGGQQQRLcI 160 (253)
T COG1117 82 DVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKDRLHKSALGLSGGQQQRLCI 160 (253)
T ss_pred CHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHHHhhCCccCCChhHHHHHHH
Confidence 57889999999999999999 89999999999999988788999999999998874 45678888999999999999
Q ss_pred HHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 596 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 596 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
||||+-+|+||+||||||+|||.+...+.++|.++++.-|||++||+|..|.+++|+.+++..|++++.|+...+-
T Consensus 161 ARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF 236 (253)
T COG1117 161 ARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIF 236 (253)
T ss_pred HHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999986653
No 91
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4e-45 Score=394.85 Aligned_cols=222 Identities=28% Similarity=0.489 Sum_probs=204.3
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc----cHHH
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA----DMDE 523 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~----~~~~ 523 (1723)
.+|+++||+|.|++ ++.||+||||+|++||+++|+|++||||||||++|.|+.+|++|+|.++|.++.. ...+
T Consensus 2 ~~i~~~nl~k~yp~---~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~ 78 (258)
T COG3638 2 MMIEVKNLSKTYPG---GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRK 78 (258)
T ss_pred ceEEEeeeeeecCC---CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHH
Confidence 36999999999973 4579999999999999999999999999999999999999999999999998853 5677
Q ss_pred HhcceEEEccCCCCCCCCCHHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHH
Q 000284 524 IRKGLGVCPQYDILFPELTVREHLEMFA--------VLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSL 595 (1723)
Q Consensus 524 ~r~~ig~~~Q~~~l~~~lTv~e~l~~~~--------~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~l 595 (1723)
.|+++||++|++.|.+.+||.+|+..+. .+-|+..++.+.++-++|+.+|+.++..+++++|||||||||+|
T Consensus 79 ~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra~~LSGGQQQRVaI 158 (258)
T COG3638 79 LRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRASTLSGGQQQRVAI 158 (258)
T ss_pred HHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHhccCCcchhHHHHH
Confidence 8999999999999999999999997643 23466656667888999999999999999999999999999999
Q ss_pred HHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 596 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 596 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
||||+.+|++++-|||+|+|||.+.+.+++.|+++. .|.|+|++-|++|.|.++||||+-|++|+++..|++.+|.+
T Consensus 159 ARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~~el~~ 237 (258)
T COG3638 159 ARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPASELTD 237 (258)
T ss_pred HHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCChhhhhH
Confidence 999999999999999999999999999999999984 58999999999999999999999999999999999876643
No 92
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2.1e-45 Score=382.89 Aligned_cols=216 Identities=31% Similarity=0.457 Sum_probs=203.3
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC----hH
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD----PK 1429 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~----~~ 1429 (1723)
||+++|++|.|++ .+.||+||||+|++||..-|+||+||||||++|+|.+..+||+|+|.++|+|+.+- ..
T Consensus 1 mI~f~~V~k~Y~~-----g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP 75 (223)
T COG2884 1 MIRFENVSKAYPG-----GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIP 75 (223)
T ss_pred CeeehhhhhhcCC-----CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccc
Confidence 5889999999985 36799999999999999999999999999999999999999999999999998652 23
Q ss_pred HhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000284 1430 AARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1509 (1723)
Q Consensus 1430 ~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~ 1509 (1723)
-+|++||+|+||.-|.++.||.||+.+..++.|.++.++++++.+.|+.+||.+.++..+.+|||||||||+||||++++
T Consensus 76 ~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~~LSGGEQQRvaIARAiV~~ 155 (223)
T COG2884 76 FLRRQIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPSQLSGGEQQRVAIARAIVNQ 155 (223)
T ss_pred hhhheeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCccccCchHHHHHHHHHHHccC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecC
Q 000284 1510 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGS 1576 (1723)
Q Consensus 1510 p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~ 1576 (1723)
|++||.||||-+|||....++++++.+++ +.| +|||+.|||.+.+..+--|++.+++|+++....
T Consensus 156 P~vLlADEPTGNLDp~~s~~im~lfeein-r~G-tTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~ 220 (223)
T COG2884 156 PAVLLADEPTGNLDPDLSWEIMRLFEEIN-RLG-TTVLMATHDLELVNRMRHRVLALEDGRLVRDES 220 (223)
T ss_pred CCeEeecCCCCCCChHHHHHHHHHHHHHh-hcC-cEEEEEeccHHHHHhccCcEEEEeCCEEEeccc
Confidence 99999999999999999999999999996 455 899999999999999999999999999987653
No 93
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.4e-44 Score=436.64 Aligned_cols=223 Identities=30% Similarity=0.467 Sum_probs=205.6
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1432 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~ 1432 (1723)
.+|+++||+|+|++ +.+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. .+
T Consensus 3 ~~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~-~~ 75 (353)
T TIGR03265 3 PYLSIDNIRKRFGA------FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPP-QK 75 (353)
T ss_pred cEEEEEEEEEEeCC------eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCH-HH
Confidence 36999999999963 458999999999999999999999999999999999999999999999999865333 35
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCE
Q 000284 1433 RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPI 1512 (1723)
Q Consensus 1433 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~v 1512 (1723)
+.||||||+..+|+.+||+||+.+..+.++.++.+.+++++++++.++|.+..++++.+|||||||||+|||||+.+|++
T Consensus 76 r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~~~~~~LSgGq~QRvaLARaL~~~P~l 155 (353)
T TIGR03265 76 RDYGIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSERKYPGQLSGGQQQRVALARALATSPGL 155 (353)
T ss_pred CCEEEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 78999999999999999999999987777777777778899999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000284 1513 VILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1583 (1723)
Q Consensus 1513 llLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~ 1583 (1723)
|||||||+|||+.+|+.+++.|+++.++.| +|+|++|||++|+..+||||++|++|++++.|+++++.++
T Consensus 156 lLLDEP~s~LD~~~r~~l~~~L~~l~~~~~-~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~ 225 (353)
T TIGR03265 156 LLLDEPLSALDARVREHLRTEIRQLQRRLG-VTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRH 225 (353)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999999865444 6899999999999999999999999999999999998754
No 94
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.2e-44 Score=437.04 Aligned_cols=221 Identities=27% Similarity=0.441 Sum_probs=205.6
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcc
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKG 527 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ 527 (1723)
..++++||+|.|++ +.+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|+++.... ..++.
T Consensus 3 ~~l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~-~~~r~ 77 (353)
T TIGR03265 3 PYLSIDNIRKRFGA----FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLP-PQKRD 77 (353)
T ss_pred cEEEEEEEEEEeCC----eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCC-HHHCC
Confidence 36999999999953 46999999999999999999999999999999999999999999999999886422 24678
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEee
Q 000284 528 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVI 607 (1723)
Q Consensus 528 ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vli 607 (1723)
+|||||++.+|+++||+||+.|+...++.++++.+++++++++.+||.+..++++.+|||||||||+|||||+.+|+++|
T Consensus 78 ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~~~~~~LSgGq~QRvaLARaL~~~P~llL 157 (353)
T TIGR03265 78 YGIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSERKYPGQLSGGQQQRVALARALATSPGLLL 157 (353)
T ss_pred EEEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhhCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999999999998877777778888899999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000284 608 LDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 673 (1723)
Q Consensus 608 LDEPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~ 673 (1723)
|||||++||+.+|+++++.|+++.+ |.|+|++|||++|+..+||||++|++|++++.|++.++.++
T Consensus 158 LDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~ 225 (353)
T TIGR03265 158 LDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRH 225 (353)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999853 89999999999999999999999999999999999888654
No 95
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-44 Score=436.38 Aligned_cols=223 Identities=28% Similarity=0.435 Sum_probs=204.3
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1433 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~ 1433 (1723)
+|+++|++|+|++ ++.+|+|+||+|++||+++|+||||||||||+|+|+|+.+|++|+|.++|+++...+. .++
T Consensus 3 ~l~i~~l~~~~~~-----~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~-~~r 76 (356)
T PRK11650 3 GLKLQAVRKSYDG-----KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEP-ADR 76 (356)
T ss_pred EEEEEeEEEEeCC-----CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCH-HHC
Confidence 5899999999942 2469999999999999999999999999999999999999999999999999865332 347
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000284 1434 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1513 (1723)
Q Consensus 1434 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vl 1513 (1723)
+||||||++.+|+.+||+||+.+..+.++.++.+.++++.++++.++|.+..++++.+|||||||||+|||||+.+|++|
T Consensus 77 ~ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~QRvalARAL~~~P~ll 156 (356)
T PRK11650 77 DIAMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKPRELSGGQRQRVAMGRAIVREPAVF 156 (356)
T ss_pred CEEEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 89999999999999999999998877767776667778899999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000284 1514 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1583 (1723)
Q Consensus 1514 lLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~ 1583 (1723)
||||||+|||+.+++.+++.|+++.++.| +|+|++|||++|+..+||||++|++|+++..|+++++.++
T Consensus 157 LLDEP~s~LD~~~r~~l~~~l~~l~~~~g-~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~ 225 (356)
T PRK11650 157 LFDEPLSNLDAKLRVQMRLEIQRLHRRLK-TTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEK 225 (356)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhC
Confidence 99999999999999999999999865444 6899999999999999999999999999999999998654
No 96
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-44 Score=436.27 Aligned_cols=221 Identities=27% Similarity=0.432 Sum_probs=206.0
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcc
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKG 527 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ 527 (1723)
..|+++||+|.|++ +.+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...+++
T Consensus 5 ~~l~~~~l~~~~~~----~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~-~~~~r~ 79 (351)
T PRK11432 5 NFVVLKNITKRFGS----NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHR-SIQQRD 79 (351)
T ss_pred cEEEEEeEEEEECC----eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCC-CHHHCC
Confidence 47999999999953 4699999999999999999999999999999999999999999999999988642 234578
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEee
Q 000284 528 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVI 607 (1723)
Q Consensus 528 ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vli 607 (1723)
+|||||++.+|+++||+||+.|..+.++.++++.+++++++++.+||.+..++++.+|||||||||+|||||+.+|++||
T Consensus 80 ig~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~~~~LSgGq~QRVaLARaL~~~P~lLL 159 (351)
T PRK11432 80 ICMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRYVDQISGGQQQRVALARALILKPKVLL 159 (351)
T ss_pred EEEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCCCEEE
Confidence 99999999999999999999999887788888888999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000284 608 LDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 673 (1723)
Q Consensus 608 LDEPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~ 673 (1723)
|||||+|||+.+|+++++.|+++.+ |+|+|++|||++|+..+||||++|++|+++..|++.++.++
T Consensus 160 LDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~ 227 (351)
T PRK11432 160 FDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQ 227 (351)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999853 89999999999999999999999999999999999888654
No 97
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-44 Score=409.63 Aligned_cols=225 Identities=28% Similarity=0.471 Sum_probs=208.6
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCC--CChHH
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIR--SDPKA 1430 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~--~~~~~ 1430 (1723)
.+++++++++.|+++ ..+++++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .....
T Consensus 2 ~~i~~~~l~~~y~~~-----~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~ 76 (235)
T COG1122 2 RMIEAENLSFRYPGR-----KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLE 76 (235)
T ss_pred ceEEEEEEEEEcCCC-----ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHH
Confidence 468999999999752 57999999999999999999999999999999999999999999999999987 45677
Q ss_pred hccceEEEecCC-CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000284 1431 ARRLIGYCPQFD-ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1509 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~-~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~ 1509 (1723)
.|+++|||+|++ ..+-.-||.|.+.|.....|++.+++++++.+.++.+++.+.+++++.+|||||||||+||.+|+.+
T Consensus 77 ~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p~~LSGGqkqRvaIA~vLa~~ 156 (235)
T COG1122 77 LRQKVGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPPFNLSGGQKQRVAIAGVLAMG 156 (235)
T ss_pred hhcceEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCccccCCcceeeHHhhHHHHcC
Confidence 899999999996 2334569999999999999999988999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000284 1510 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1583 (1723)
Q Consensus 1510 p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~ 1583 (1723)
|++|+|||||+||||.+++.+++.++++.++ ++.|||++|||++++..+|||+++|++|+++..|+|+++.+.
T Consensus 157 P~iliLDEPta~LD~~~~~~l~~~l~~L~~~-~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 157 PEILLLDEPTAGLDPKGRRELLELLKKLKEE-GGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHHHhc-CCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 9999999999999999999999999999754 346899999999999999999999999999999999888764
No 98
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2.6e-44 Score=434.70 Aligned_cols=223 Identities=27% Similarity=0.417 Sum_probs=204.7
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCc--eEEEEcCeeCCCChHHh
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTD--GTAFIFGKDIRSDPKAA 1431 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~--G~i~i~G~~i~~~~~~~ 1431 (1723)
.|+++||+|+|++ +.+|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|+++...+. .
T Consensus 5 ~l~~~~l~~~~~~------~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~-~ 77 (362)
T TIGR03258 5 GIRIDHLRVAYGA------NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP-H 77 (362)
T ss_pred EEEEEEEEEEECC------eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH-H
Confidence 4889999999963 469999999999999999999999999999999999999999 999999999865332 3
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000284 1432 RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1511 (1723)
Q Consensus 1432 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~ 1511 (1723)
++.|||++|++.+|+.+||+||+.+..+.++.++.+.++++.++++.++|.+..++++++|||||||||+|||||+.+|+
T Consensus 78 ~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~~~LSgGq~QRvaLARAL~~~P~ 157 (362)
T TIGR03258 78 KRGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLPAQLSGGMQQRIAIARAIAIEPD 157 (362)
T ss_pred HCCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 56799999999999999999999998777777777777889999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000284 1512 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1583 (1723)
Q Consensus 1512 vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~ 1583 (1723)
+|||||||+|||+.+|+.+++.|+++.++.+++|+|++|||++|+..+||||++|++|+++..|+++++.++
T Consensus 158 llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~ 229 (362)
T TIGR03258 158 VLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDA 229 (362)
T ss_pred EEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999999986543136899999999999999999999999999999999999765
No 99
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.1e-45 Score=399.06 Aligned_cols=224 Identities=32% Similarity=0.504 Sum_probs=202.8
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCCh--HH
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDP--KA 1430 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~--~~ 1430 (1723)
+++++++|+|+||+ ..||+||||+|++||++||+|||||||||++++|+|.++|++|+|.++|++|...+ ..
T Consensus 3 ~lL~v~~l~k~FGG------l~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~i 76 (250)
T COG0411 3 PLLEVRGLSKRFGG------LTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRI 76 (250)
T ss_pred ceeeeccceeecCC------EEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHH
Confidence 46899999999964 67999999999999999999999999999999999999999999999999998733 33
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHc-------CC-----ChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHH
Q 000284 1431 ARRLIGYCPQFDALLEYLTVQEHLELYARIK-------GV-----AEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKR 1498 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~-------g~-----~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kq 1498 (1723)
.|..|+--+|...+|++|||.||+......+ +. .+.+..+++.++|+.+||.+.+++++++||+||||
T Consensus 77 ar~Gi~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~~LsyG~qR 156 (250)
T COG0411 77 ARLGIARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAGNLSYGQQR 156 (250)
T ss_pred HhccceeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhhcCChhHhH
Confidence 5677889999999999999999998754422 11 24556778889999999999999999999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChh
Q 000284 1499 KLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQ 1578 (1723)
Q Consensus 1499 rl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~ 1578 (1723)
||.|||||+.+|++|+||||.+||.|....++.+.|++++++ ++.||+++-|||+.+..+||||++|+.|+++++|+|+
T Consensus 157 ~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~-~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~ 235 (250)
T COG0411 157 RLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDR-GGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPE 235 (250)
T ss_pred HHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhc-CCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHH
Confidence 999999999999999999999999999999999999999743 4579999999999999999999999999999999999
Q ss_pred HHHhh
Q 000284 1579 HLKTR 1583 (1723)
Q Consensus 1579 ~l~~~ 1583 (1723)
++.+.
T Consensus 236 eV~~d 240 (250)
T COG0411 236 EVRNN 240 (250)
T ss_pred HHhcC
Confidence 98753
No 100
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.7e-44 Score=436.15 Aligned_cols=220 Identities=27% Similarity=0.433 Sum_probs=204.8
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCc--ceEEEccccCCccHHHHhc
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTT--GDALVFGKNITADMDEIRK 526 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~--G~i~i~g~~i~~~~~~~r~ 526 (1723)
.++++||+|.|++ +.+|+|+||++.+||+++|+||||||||||+++|+|+.+|++ |+|.++|.++... ...++
T Consensus 5 ~l~~~~l~~~~~~----~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~-~~~~r 79 (362)
T TIGR03258 5 GIRIDHLRVAYGA----NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHA-PPHKR 79 (362)
T ss_pred EEEEEEEEEEECC----eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCC-CHHHC
Confidence 5899999999953 469999999999999999999999999999999999999999 9999999988532 22457
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEe
Q 000284 527 GLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVV 606 (1723)
Q Consensus 527 ~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vl 606 (1723)
.||||+|++.+|+++||+||+.|+...++.++++.+++++++++.+||.+..++++++|||||||||+|||||+.+|++|
T Consensus 80 ~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~~~LSgGq~QRvaLARAL~~~P~ll 159 (362)
T TIGR03258 80 GLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLPAQLSGGMQQRIAIARAIAIEPDVL 159 (362)
T ss_pred CEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 89999999999999999999999887777887788889999999999999999999999999999999999999999999
Q ss_pred eccCCCCCCCHHHHHHHHHHHHHHhC---CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000284 607 ILDEPTSGMDPYSMRLTWQLIKKIKK---GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 673 (1723)
Q Consensus 607 iLDEPtsgLD~~~r~~l~~~l~~~~~---~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~ 673 (1723)
||||||+|||+.+|+++++.|+++.+ |.|+|++|||++|+..+||||++|++|+++..|++.++.++
T Consensus 160 LLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~ 229 (362)
T TIGR03258 160 LLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDA 229 (362)
T ss_pred EEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999998853 78999999999999999999999999999999999988654
No 101
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.7e-45 Score=396.87 Aligned_cols=224 Identities=30% Similarity=0.449 Sum_probs=203.5
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc--cHHHHh
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA--DMDEIR 525 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~--~~~~~r 525 (1723)
..++++||++.|+.+.....||+||||++.+||++||+|++|||||||.++|+|+.+|++|+|+++|..... .....+
T Consensus 2 ~~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~ 81 (252)
T COG1124 2 TLLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFY 81 (252)
T ss_pred ceEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhc
Confidence 368999999999875544569999999999999999999999999999999999999999999999987643 233567
Q ss_pred cceEEEccCC--CCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCChhHHHHHHHHHHHhcC
Q 000284 526 KGLGVCPQYD--ILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLAD-KVNIVVRALSGGMKRKLSLGIALIGD 602 (1723)
Q Consensus 526 ~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~-~~~~~~~~LSgGqkqrl~lA~al~~~ 602 (1723)
+.|.+||||| .|.|..||.+.|.-.....|.++. ++++.++|+.+||.+ .+++++.+|||||+||+||||||+-+
T Consensus 82 ~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~--~~~i~~~L~~VgL~~~~l~R~P~eLSGGQ~QRiaIARAL~~~ 159 (252)
T COG1124 82 RPVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKS--QQRIAELLDQVGLPPSFLDRRPHELSGGQRQRIAIARALIPE 159 (252)
T ss_pred cceeEEecCCccccCcchhHHHHHhhhhccCCccHH--HHHHHHHHHHcCCCHHHHhcCchhcChhHHHHHHHHHHhccC
Confidence 8899999998 589999999999888887777654 455999999999985 57999999999999999999999999
Q ss_pred CcEeeccCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000284 603 SKVVILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 673 (1723)
Q Consensus 603 p~vliLDEPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~ 673 (1723)
|++||||||||+||+....++|++|.++++ +-|+|++|||+..++.+||||+||++|++++.++..+++..
T Consensus 160 PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~ 232 (252)
T COG1124 160 PKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSH 232 (252)
T ss_pred CCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcC
Confidence 999999999999999999999999999975 56999999999999999999999999999999999888765
No 102
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-44 Score=434.78 Aligned_cols=221 Identities=24% Similarity=0.411 Sum_probs=204.2
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcce
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGL 528 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~i 528 (1723)
.++++||+|.|++ ++.+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.++.... ..++.|
T Consensus 3 ~l~i~~l~~~~~~---~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~-~~~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDG---KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELE-PADRDI 78 (356)
T ss_pred EEEEEeEEEEeCC---CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCC-HHHCCE
Confidence 5899999999942 246999999999999999999999999999999999999999999999999886422 235789
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeec
Q 000284 529 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVIL 608 (1723)
Q Consensus 529 g~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliL 608 (1723)
|||||++.+|+++||+||+.+..+.++.++.+.+++++++++.+||.+..++++++|||||||||+|||||+.+|++|||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~QRvalARAL~~~P~llLL 158 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKPRELSGGQRQRVAMGRAIVREPAVFLF 158 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999999999988777777777788999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000284 609 DEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 673 (1723)
Q Consensus 609 DEPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~ 673 (1723)
||||++||+.+|+.+++.|+++.+ |.|+|++|||++|+..+||||++|++|+++..|++.++.++
T Consensus 159 DEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~ 225 (356)
T PRK11650 159 DEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEK 225 (356)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhC
Confidence 999999999999999999999853 89999999999999999999999999999999999888553
No 103
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.5e-44 Score=411.64 Aligned_cols=221 Identities=32% Similarity=0.531 Sum_probs=197.4
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h---HH
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P---KA 1430 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-~---~~ 1430 (1723)
|+++|+++.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... . ..
T Consensus 1 l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~ 74 (235)
T cd03261 1 IELRGLTKSFGG------RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYR 74 (235)
T ss_pred CeEEEEEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHH
Confidence 468999999953 4699999999999999999999999999999999999999999999999988642 2 34
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHc-CCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000284 1431 ARRLIGYCPQFDALLEYLTVQEHLELYARIK-GVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1509 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~-g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~ 1509 (1723)
.++.|||+||++.+++.+|++||+.+..... +.+.++..+++.++++.+++.+..++++++|||||||||+||+||+.+
T Consensus 75 ~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~ia~al~~~ 154 (235)
T cd03261 75 LRRRMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAEDLYPAELSGGMKKRVALARALALD 154 (235)
T ss_pred HhcceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 5778999999999999999999998765433 344445566788899999998888999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1510 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1510 p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
|++|||||||+|||+.+++.+++.|++++++.| +|||++|||++++..+||||++|++|++++.|+++++.+
T Consensus 155 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 226 (235)
T cd03261 155 PELLLYDEPTAGLDPIASGVIDDLIRSLKKELG-LTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRA 226 (235)
T ss_pred CCEEEecCCcccCCHHHHHHHHHHHHHHHHhcC-cEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcC
Confidence 999999999999999999999999999864334 589999999999999999999999999999999988754
No 104
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.2e-44 Score=407.64 Aligned_cols=219 Identities=38% Similarity=0.599 Sum_probs=198.3
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1434 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~~ 1434 (1723)
|+++|++|+|++ +.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.......+++
T Consensus 1 i~~~~~~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 74 (220)
T cd03265 1 IEVENLVKKYGD------FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRR 74 (220)
T ss_pred CEEEEEEEEECC------EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhc
Confidence 468999999953 46999999999999999999999999999999999999999999999999886544456678
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000284 1435 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1514 (1723)
Q Consensus 1435 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vll 1514 (1723)
+||+||++.+++.+|++||+.+....++.+..+.++++.++++.+++.+..++++.+|||||||||+||+||+.+|++||
T Consensus 75 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qr~~la~al~~~p~lll 154 (220)
T cd03265 75 IGIVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRLVKTYSGGMRRRLEIARSLVHRPEVLF 154 (220)
T ss_pred EEEecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999999999987766666555556678899999999988899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000284 1515 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1580 (1723)
Q Consensus 1515 LDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l 1580 (1723)
|||||+|||+.+++.+++.|++++++.| +|||++||+++++..+|||+++|++|+++..|+++++
T Consensus 155 lDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 155 LDEPTIGLDPQTRAHVWEYIEKLKEEFG-MTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred EcCCccCCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 9999999999999999999999864434 5899999999999999999999999999999988765
No 105
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-44 Score=403.16 Aligned_cols=215 Identities=28% Similarity=0.479 Sum_probs=189.2
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcc
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKG 527 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ 527 (1723)
..|+++||++.|++ . .||+||||++++|++++|+||||||||||+++|.|+++|++|+|.+.|.++..... +.+
T Consensus 3 ~~i~v~nl~v~y~~---~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~--~~~ 76 (254)
T COG1121 3 PMIEVENLTVSYGN---R-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK--RLR 76 (254)
T ss_pred cEEEEeeeEEEECC---E-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc--CCe
Confidence 47999999999953 2 59999999999999999999999999999999999999999999999987754322 467
Q ss_pred eEEEccCC---CCCCCCCHHHHHHHHHHhc----CCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHh
Q 000284 528 LGVCPQYD---ILFPELTVREHLEMFAVLK----GVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALI 600 (1723)
Q Consensus 528 ig~~~Q~~---~l~~~lTv~e~l~~~~~~~----g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~ 600 (1723)
||||||.. .-|| +||+|-+.++..-+ +...+..+++++++|+.+|+.+.+++++++|||||+||+.|||||+
T Consensus 77 IgYVPQ~~~~d~~fP-~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~i~~LSGGQ~QRV~lARAL~ 155 (254)
T COG1121 77 IGYVPQKSSVDRSFP-ITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDRQIGELSGGQKQRVLLARALA 155 (254)
T ss_pred EEEcCcccccCCCCC-cCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCCcccccCcHHHHHHHHHHHhc
Confidence 99999964 3455 69999998864322 1122334789999999999999999999999999999999999999
Q ss_pred cCCcEeeccCCCCCCCHHHHHHHHHHHHHHhC-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHH
Q 000284 601 GDSKVVILDEPTSGMDPYSMRLTWQLIKKIKK-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 670 (1723)
Q Consensus 601 ~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~L 670 (1723)
.+|++|+|||||+|+|+.++..+.++|+++++ |+|||++|||++.+..++|||+.|+ +++.|.|++++.
T Consensus 156 ~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~ 225 (254)
T COG1121 156 QNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEV 225 (254)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhc
Confidence 99999999999999999999999999999974 9999999999999999999999985 688999998543
No 106
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-44 Score=431.42 Aligned_cols=225 Identities=32% Similarity=0.484 Sum_probs=204.8
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-c---HHHH
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-D---MDEI 524 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~---~~~~ 524 (1723)
+|+++||+|.|+.+.+.+.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. + ....
T Consensus 1 mi~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 80 (343)
T PRK11153 1 MIELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKA 80 (343)
T ss_pred CEEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 37899999999632223579999999999999999999999999999999999999999999999998853 2 2345
Q ss_pred hcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCc
Q 000284 525 RKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSK 604 (1723)
Q Consensus 525 r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~ 604 (1723)
|+++||+||++.+++.+||+||+.+.....+.+..+.++++.++++.+||.+..++++.+||||||||++|||||+.+|+
T Consensus 81 ~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~qRv~lAraL~~~p~ 160 (343)
T PRK11153 81 RRQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKADRYPAQLSGGQKQRVAIARALASNPK 160 (343)
T ss_pred hcCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHHcCCC
Confidence 78899999999999999999999998777777776777889999999999998999999999999999999999999999
Q ss_pred EeeccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000284 605 VVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 673 (1723)
Q Consensus 605 vliLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~ 673 (1723)
+|||||||+|||+.+++.++++|++++ + |+|||++||+++++..+||||++|++|++++.|++.++...
T Consensus 161 iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~ 231 (343)
T PRK11153 161 VLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSH 231 (343)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999999985 3 89999999999999999999999999999999999888654
No 107
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-44 Score=430.27 Aligned_cols=227 Identities=30% Similarity=0.513 Sum_probs=203.8
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h---H
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P---K 1429 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-~---~ 1429 (1723)
+|+++||+|+|+++. +.+.+++|+||+|++||++||+||||||||||+|+|+|+++|++|+|.++|.++... . .
T Consensus 1 mi~i~~l~~~y~~~~--~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~ 78 (343)
T PRK11153 1 MIELKNISKVFPQGG--RTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELR 78 (343)
T ss_pred CEEEEeEEEEeCCCC--CceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHH
Confidence 478999999996311 135699999999999999999999999999999999999999999999999998642 2 2
Q ss_pred HhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000284 1430 AARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1509 (1723)
Q Consensus 1430 ~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~ 1509 (1723)
..+++|||+||++.+++.+|++||+.+.....+.+..+.++++.++++.++|.+..++++.+|||||||||+|||||+.+
T Consensus 79 ~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~qRv~lAraL~~~ 158 (343)
T PRK11153 79 KARRQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKADRYPAQLSGGQKQRVAIARALASN 158 (343)
T ss_pred HHhcCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHHcC
Confidence 34678999999999999999999999877766766666667788999999999889999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000284 1510 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1583 (1723)
Q Consensus 1510 p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~ 1583 (1723)
|++|||||||+|||+.+++.+++.|++++++.| +|||++||++++++.+|||+++|++|++++.|+++++...
T Consensus 159 p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g-~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~ 231 (343)
T PRK11153 159 PKVLLCDEATSALDPATTRSILELLKDINRELG-LTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSH 231 (343)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999999999865444 6899999999999999999999999999999999988654
No 108
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.6e-44 Score=407.41 Aligned_cols=217 Identities=39% Similarity=0.603 Sum_probs=199.0
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcceE
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 529 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 529 (1723)
|+++|++|.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.......++.+|
T Consensus 1 i~~~~~~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGD----FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIG 76 (220)
T ss_pred CEEEEEEEEECC----EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEE
Confidence 478999999953 4699999999999999999999999999999999999999999999999987544445677899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeecc
Q 000284 530 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 609 (1723)
Q Consensus 530 ~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 609 (1723)
|+||++.+++.+||+||+.+.....+.+.++.+++++++++.+||.+..++++.+||||||||++||+||+.+|+++|||
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qr~~la~al~~~p~llllD 156 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRLVKTYSGGMRRRLEIARSLVHRPEVLFLD 156 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999999999999998877667666666778999999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHH
Q 000284 610 EPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 670 (1723)
Q Consensus 610 EPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~L 670 (1723)
|||+|||+.+++.++++|++++ + |+|||++||+++++..+||||++|++|+++..|++.++
T Consensus 157 EPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 157 EPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 9999999999999999999985 3 89999999999999999999999999999999887654
No 109
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.5e-44 Score=411.02 Aligned_cols=219 Identities=32% Similarity=0.556 Sum_probs=198.2
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-c---HHHHh
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-D---MDEIR 525 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~---~~~~r 525 (1723)
|+++||++.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. + ....|
T Consensus 1 l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 76 (235)
T cd03261 1 IELRGLTKSFGG----RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLR 76 (235)
T ss_pred CeEEEEEEEECC----EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHh
Confidence 468999999953 469999999999999999999999999999999999999999999999998753 2 24567
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCc
Q 000284 526 KGLGVCPQYDILFPELTVREHLEMFAVLK-GVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSK 604 (1723)
Q Consensus 526 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~-g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~ 604 (1723)
+.+||+||++.+++.+||+||+.+..... +.+.++.++++.++++.+||.+..++++++|||||||||+|||||+.+|+
T Consensus 77 ~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~ia~al~~~p~ 156 (235)
T cd03261 77 RRMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAEDLYPAELSGGMKKRVALARALALDPE 156 (235)
T ss_pred cceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 88999999999999999999998875433 45556667788999999999988899999999999999999999999999
Q ss_pred EeeccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 605 VVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 605 vliLDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
+|||||||+|||+.+++.++++|++++ .|+|||++||+++++..+||||++|++|++++.|++.++.+
T Consensus 157 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 226 (235)
T cd03261 157 LLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRA 226 (235)
T ss_pred EEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcC
Confidence 999999999999999999999999985 38999999999999999999999999999999999877643
No 110
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.1e-43 Score=430.48 Aligned_cols=224 Identities=28% Similarity=0.482 Sum_probs=205.1
Q ss_pred cceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHh
Q 000284 1352 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAA 1431 (1723)
Q Consensus 1352 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~ 1431 (1723)
.++|+++|++|.|++ +.+|+++||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. .
T Consensus 12 ~~~L~l~~l~~~~~~------~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~-~ 84 (375)
T PRK09452 12 SPLVELRGISKSFDG------KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPA-E 84 (375)
T ss_pred CceEEEEEEEEEECC------eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH-H
Confidence 357999999999963 459999999999999999999999999999999999999999999999999865332 3
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000284 1432 RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1511 (1723)
Q Consensus 1432 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~ 1511 (1723)
+++|||+||++.+|+.+||+||+.+..+.++.+..+.++++.++++.++|.+..++++.+|||||||||+|||||+.+|+
T Consensus 85 ~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~~LSgGq~QRVaLARaL~~~P~ 164 (375)
T PRK09452 85 NRHVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKPHQLSGGQQQRVAIARAVVNKPK 164 (375)
T ss_pred HCCEEEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 56799999999999999999999987776677666667788999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000284 1512 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1583 (1723)
Q Consensus 1512 vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~ 1583 (1723)
+|||||||+|||+.+|+.+++.|+++.++.| +|+|++|||++|+..+||||++|++|+++..|+++++.++
T Consensus 165 llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g-~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~ 235 (375)
T PRK09452 165 VLLLDESLSALDYKLRKQMQNELKALQRKLG-ITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEE 235 (375)
T ss_pred EEEEeCCCCcCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999875444 6899999999999999999999999999999999998754
No 111
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=6e-44 Score=418.88 Aligned_cols=200 Identities=22% Similarity=0.307 Sum_probs=169.9
Q ss_pred CcceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHH
Q 000284 1351 DNAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKA 1430 (1723)
Q Consensus 1351 ~~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~ 1430 (1723)
..+.+++.++++.|..+ ..+.+.+++++++--+..+++|+||+||||++|++.|...|+.|.+.+.+
T Consensus 359 ~~p~l~i~~V~f~y~p~----~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~--------- 425 (582)
T KOG0062|consen 359 SPPNLRISYVAFEYTPS----EYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP--------- 425 (582)
T ss_pred CCCeeEEEeeeccCCCc----chhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc---------
Confidence 34689999999999643 22689999999999999999999999999999999999999999987643
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHHHhcC
Q 000284 1431 ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIAMIGD 1509 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~kqrl~iA~al~~~ 1509 (1723)
|++|+|..|+..=+-++.|.+--.+.+...|.++ +.+++.+..+||. +.+.+++.+||||||-||++|.....+
T Consensus 426 -r~ri~~f~Qhhvd~l~~~v~~vd~~~~~~pG~~~----ee~r~hl~~~Gl~g~la~~si~~LSGGQKsrvafA~~~~~~ 500 (582)
T KOG0062|consen 426 -RLRIKYFAQHHVDFLDKNVNAVDFMEKSFPGKTE----EEIRRHLGSFGLSGELALQSIASLSGGQKSRVAFAACTWNN 500 (582)
T ss_pred -cceecchhHhhhhHHHHHhHHHHHHHHhCCCCCH----HHHHHHHHhcCCCchhhhccccccCCcchhHHHHHHHhcCC
Confidence 5679999998544444555543333344456644 4566789999996 667788999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEE
Q 000284 1510 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRC 1573 (1723)
Q Consensus 1510 p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~ 1573 (1723)
|.+|+|||||++||..+-..+-++|+.+ +| .||++|||.+++..+|+.+++.++|++.-
T Consensus 501 PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~G--GVv~VSHd~~fi~~~c~E~Wvve~g~vt~ 559 (582)
T KOG0062|consen 501 PHLLVLDEPTNHLDRDSLGALAKALKNF---NG--GVVLVSHDEEFISSLCKELWVVEDGKVTP 559 (582)
T ss_pred CcEEEecCCCccccHHHHHHHHHHHHhc---CC--cEEEEECcHHHHhhcCceeEEEcCCcEEe
Confidence 9999999999999999999999999987 23 49999999999999999999999999975
No 112
>COG4586 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.2e-44 Score=393.78 Aligned_cols=241 Identities=31% Similarity=0.452 Sum_probs=217.9
Q ss_pred eEEEEeEEEEcCCCC---------------ccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEE
Q 000284 1354 IIYLRNLRKVYPGGK---------------RSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAF 1418 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~---------------~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~ 1418 (1723)
++.++||+|.|.-.. +.....||+||||+|++||++|++|+||||||||+|||+|++.|++|.|.
T Consensus 3 ~i~~~~l~k~~~~~~k~pgl~g~l~~~~~~k~~~~~AVqdisf~IP~G~ivgflGaNGAGKSTtLKmLTGll~p~~G~v~ 82 (325)
T COG4586 3 MIMVENLSKNYPVAIKEPGLKGSLNHFFHRKERSIEAVQDISFEIPKGEIVGFLGANGAGKSTTLKMLTGLLLPTSGKVR 82 (325)
T ss_pred eeEecccccccceeeeCchhHHHHHhhcCchhhhhhhhheeeeecCCCcEEEEEcCCCCcchhhHHHHhCccccCCCeEE
Confidence 577888888885321 11234699999999999999999999999999999999999999999999
Q ss_pred EcCeeCCCChHHhccceEEEe-cCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHH
Q 000284 1419 IFGKDIRSDPKAARRLIGYCP-QFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNK 1497 (1723)
Q Consensus 1419 i~G~~i~~~~~~~~~~ig~~p-Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~k 1497 (1723)
++|++..++.+..-+++|+|. |...++.++.+.|.+.....++.++.++.+++.+.+.+.++|++..+.+++.||-|||
T Consensus 83 V~G~~Pf~~~~~~~~~~~~v~gqk~ql~Wdlp~~ds~~v~~~Iy~Ipd~~F~~r~~~l~eiLdl~~~lk~~vr~LSlGqR 162 (325)
T COG4586 83 VNGKDPFRRREEYLRSIGLVMGQKLQLWWDLPALDSLEVLKLIYEIPDDEFAERLDFLTEILDLEGFLKWPVRKLSLGQR 162 (325)
T ss_pred ecCcCcchhHHHHHHHHHHHhhhhheeeeechhhhhHHHHHHHHhCCHHHHHHHHHHHHHHhcchhhhhhhhhhccchHH
Confidence 999998877777777898875 5677888888999999888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecCh
Q 000284 1498 RKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSP 1577 (1723)
Q Consensus 1498 qrl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~ 1577 (1723)
+|+.||.||+++|+||+|||||-|||..++..+++.|++++++++ +||++|||+|+.++++||||+.|++|+++..|+.
T Consensus 163 mraeLaaaLLh~p~VLfLDEpTvgLDV~aq~~ir~Flke~n~~~~-aTVllTTH~~~di~~lc~rv~~I~~Gqlv~dg~l 241 (325)
T COG4586 163 MRAELAAALLHPPKVLFLDEPTVGLDVNAQANIREFLKEYNEERQ-ATVLLTTHIFDDIATLCDRVLLIDQGQLVFDGTL 241 (325)
T ss_pred HHHHHHHHhcCCCcEEEecCCccCcchhHHHHHHHHHHHHHHhhC-ceEEEEecchhhHHHhhhheEEeeCCcEeecccH
Confidence 999999999999999999999999999999999999999987765 7999999999999999999999999999999999
Q ss_pred hHHHhhcCCeEEEEEeec
Q 000284 1578 QHLKTRFGNFLELEVKPT 1595 (1723)
Q Consensus 1578 ~~l~~~~~~~~~~~~~~~ 1595 (1723)
.+|+.+|+...++.+...
T Consensus 242 ~~l~~~f~~~k~~~~el~ 259 (325)
T COG4586 242 AQLQEQFGPYKEFSVELK 259 (325)
T ss_pred HHHHHHhCCceEEEEEEc
Confidence 999999998877765543
No 113
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-44 Score=402.15 Aligned_cols=232 Identities=28% Similarity=0.436 Sum_probs=212.9
Q ss_pred eEEEEeEEEEcCCCC------------------ccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCce
Q 000284 1354 IIYLRNLRKVYPGGK------------------RSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDG 1415 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~------------------~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G 1415 (1723)
.|+++|++|.|+++. +.+....++|+||+|++|||+.|+|-+|||||||+|+|.++++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 588999999998642 12345678999999999999999999999999999999999999999
Q ss_pred EEEEcCeeCCC-ChHH----hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCC
Q 000284 1416 TAFIFGKDIRS-DPKA----ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSF 1490 (1723)
Q Consensus 1416 ~i~i~G~~i~~-~~~~----~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 1490 (1723)
+|.++|.|+.+ +.++ .|+++++|+|..+|+|..||.||..|...+.|+++++.++++.++|+.+||..+.+++++
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp~ 163 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYPN 163 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCcc
Confidence 99999999966 3332 356799999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCE
Q 000284 1491 TLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQ 1570 (1723)
Q Consensus 1491 ~LSgG~kqrl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~ 1570 (1723)
+|||||||||.|||||+.+|+||++|||+|+|||--|.++.+-|.++.++-+ +||+++|||++|+.++.|||+||++|+
T Consensus 164 eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~-KTIvFitHDLdEAlriG~rIaimkdG~ 242 (386)
T COG4175 164 ELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLK-KTIVFITHDLDEALRIGDRIAIMKDGE 242 (386)
T ss_pred cccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhC-CeEEEEecCHHHHHhccceEEEecCCe
Confidence 9999999999999999999999999999999999999999999999976654 689999999999999999999999999
Q ss_pred EEEecChhHHHhhcCC
Q 000284 1571 LRCIGSPQHLKTRFGN 1586 (1723)
Q Consensus 1571 l~~~g~~~~l~~~~~~ 1586 (1723)
++..|+|+|+...-.+
T Consensus 243 ivQ~Gtp~eIl~~PAn 258 (386)
T COG4175 243 IVQVGTPEEILLNPAN 258 (386)
T ss_pred EEEeCCHHHHHcCccH
Confidence 9999999998765433
No 114
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-43 Score=430.18 Aligned_cols=224 Identities=29% Similarity=0.476 Sum_probs=205.6
Q ss_pred cceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHh
Q 000284 1352 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAA 1431 (1723)
Q Consensus 1352 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~ 1431 (1723)
..+|+++|++|+|++ +.+|+++||+|++||+++|+||||||||||+++|+|+.+|++|+|+++|+++...+ ..
T Consensus 17 ~~~l~l~~v~~~~~~------~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~-~~ 89 (377)
T PRK11607 17 TPLLEIRNLTKSFDG------QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVP-PY 89 (377)
T ss_pred CceEEEEeEEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCC-HH
Confidence 357999999999953 46999999999999999999999999999999999999999999999999986533 34
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000284 1432 RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1511 (1723)
Q Consensus 1432 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~ 1511 (1723)
++.|||+||++.+|+.+||.||+.+..+.++.+..+.++++.++++.++|.+..++++.+|||||||||+|||||+.+|+
T Consensus 90 ~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~~~LSgGq~QRVaLARAL~~~P~ 169 (377)
T PRK11607 90 QRPINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKPHQLSGGQRQRVALARSLAKRPK 169 (377)
T ss_pred HCCEEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 67899999999999999999999987776677766777889999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000284 1512 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1583 (1723)
Q Consensus 1512 vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~ 1583 (1723)
+|||||||+|||+.+|+.+++.|+++.++.| .|+|++|||++|+..+||||++|++|+++..|+++++.++
T Consensus 170 lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g-~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~ 240 (377)
T PRK11607 170 LLLLDEPMGALDKKLRDRMQLEVVDILERVG-VTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEH 240 (377)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999865545 6899999999999999999999999999999999998754
No 115
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=9e-44 Score=431.34 Aligned_cols=221 Identities=24% Similarity=0.401 Sum_probs=204.6
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcc
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKG 527 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ 527 (1723)
..++++||+|.|++ +.+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.... ..++.
T Consensus 13 ~~L~l~~l~~~~~~----~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~-~~~r~ 87 (375)
T PRK09452 13 PLVELRGISKSFDG----KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVP-AENRH 87 (375)
T ss_pred ceEEEEEEEEEECC----eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCC-HHHCC
Confidence 46999999999953 46999999999999999999999999999999999999999999999999886422 23578
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEee
Q 000284 528 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVI 607 (1723)
Q Consensus 528 ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vli 607 (1723)
+|||||++.+|+++||+||+.|....++.+..+.+++++++++.+||.+..++++.+|||||||||+|||||+.+|++||
T Consensus 88 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~~LSgGq~QRVaLARaL~~~P~llL 167 (375)
T PRK09452 88 VNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKPHQLSGGQQQRVAIARAVVNKPKVLL 167 (375)
T ss_pred EEEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999999999998777777777778899999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000284 608 LDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 673 (1723)
Q Consensus 608 LDEPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~ 673 (1723)
|||||+|||+.+|+.+++.|+++.+ |.|+|++|||++|+..+||||++|++|++...|++.++.++
T Consensus 168 LDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~ 235 (375)
T PRK09452 168 LDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEE 235 (375)
T ss_pred EeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999853 89999999999999999999999999999999999888654
No 116
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.4e-43 Score=427.91 Aligned_cols=222 Identities=25% Similarity=0.404 Sum_probs=201.0
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1433 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~ 1433 (1723)
+|+++|++|+|++ +.+|+|+||+|++||++||+||||||||||+|+|+|+++|++|+|.++|+++.... ..++
T Consensus 2 ~L~i~~l~~~~~~------~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~-~~~r 74 (353)
T PRK10851 2 SIEIANIKKSFGR------TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLH-ARDR 74 (353)
T ss_pred EEEEEEEEEEeCC------eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCC-HHHC
Confidence 4889999999963 45999999999999999999999999999999999999999999999999986532 2456
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHc----CCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000284 1434 LIGYCPQFDALLEYLTVQEHLELYARIK----GVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1509 (1723)
Q Consensus 1434 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~----g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~ 1509 (1723)
+||||||++.+++.+||+||+.+..... +.+.++.++++.++++.++|.+..++++.+|||||||||+|||||+.+
T Consensus 75 ~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgGq~QRvalArAL~~~ 154 (353)
T PRK10851 75 KVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYPAQLSGGQKQRVALARALAVE 154 (353)
T ss_pred CEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 7999999999999999999999876542 344455667889999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000284 1510 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1583 (1723)
Q Consensus 1510 p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~ 1583 (1723)
|++|||||||+|||+.+++.+++.|+++.++.| +|+|++|||++++..+||||++|++|+++..|+++++.++
T Consensus 155 P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g-~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~ 227 (353)
T PRK10851 155 PQILLLDEPFGALDAQVRKELRRWLRQLHEELK-FTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWRE 227 (353)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999999999965434 6899999999999999999999999999999999998654
No 117
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.2e-43 Score=404.30 Aligned_cols=216 Identities=35% Similarity=0.582 Sum_probs=197.6
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcceE
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 529 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 529 (1723)
++++|++|.|+++.+...+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.......++.+|
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~ 81 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRLG 81 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhEE
Confidence 78999999996432222699999999999999999999999999999999999999999999999988655556678999
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeecc
Q 000284 530 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 609 (1723)
Q Consensus 530 ~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 609 (1723)
||||++.+++.+||+||+.+....++.+..+.++++.++++.+|+.+..++++++||||||||++|||||+.+|++||||
T Consensus 82 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~illlD 161 (218)
T cd03266 82 FVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELLDRRVGGFSTGMRQKVAIARALVHDPPVLLLD 161 (218)
T ss_pred EecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhhhhhhcCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999999999999998777667666667788999999999998899999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEec
Q 000284 610 EPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 665 (1723)
Q Consensus 610 EPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~G 665 (1723)
|||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++|++|++.+.|
T Consensus 162 EPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 162 EPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred CCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999985 5899999999999999999999999999998654
No 118
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.1e-44 Score=379.65 Aligned_cols=221 Identities=24% Similarity=0.436 Sum_probs=204.0
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCc-----eEEEEcCeeCCC-
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTD-----GTAFIFGKDIRS- 1426 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~-----G~i~i~G~~i~~- 1426 (1723)
+.++++||++.|+ ++.||+|||++|++++++||+||+||||||++|++..+..... |+|.++|++|..
T Consensus 6 ~~~~~~~l~~yYg------~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~ 79 (253)
T COG1117 6 PAIEVRDLNLYYG------DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDP 79 (253)
T ss_pred ceeEecceeEEEC------chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCC
Confidence 5689999999996 4679999999999999999999999999999999999987765 999999999966
Q ss_pred --ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHHH
Q 000284 1427 --DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRKL 1500 (1723)
Q Consensus 1427 --~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~kqrl 1500 (1723)
+..++|++||+|+|.|.-|| +|++||+.+..++.|+..++.++.+++.|+...|. +..++.+..|||||||||
T Consensus 80 ~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKDrL~~sa~~LSGGQQQRL 158 (253)
T COG1117 80 KVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKDRLHKSALGLSGGQQQRL 158 (253)
T ss_pred CCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHHHhhCCccCCChhHHHHH
Confidence 46789999999999999998 99999999999999988878888999999988885 457788999999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000284 1501 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1580 (1723)
Q Consensus 1501 ~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l 1580 (1723)
||||||+-+|+|||||||||+|||.+...+.++|.++++ +-|||++||+|..+.+++|+.+++..|++++.|+.+++
T Consensus 159 cIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~---~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~i 235 (253)
T COG1117 159 CIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK---KYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKI 235 (253)
T ss_pred HHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh---ccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhh
Confidence 999999999999999999999999999999999999963 36999999999999999999999999999999999887
Q ss_pred Hhh
Q 000284 1581 KTR 1583 (1723)
Q Consensus 1581 ~~~ 1583 (1723)
...
T Consensus 236 F~~ 238 (253)
T COG1117 236 FTN 238 (253)
T ss_pred hcC
Confidence 643
No 119
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.4e-43 Score=427.91 Aligned_cols=220 Identities=24% Similarity=0.408 Sum_probs=201.3
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcce
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGL 528 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~i 528 (1723)
.|+++||+|.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|+++|+++... ...++++
T Consensus 2 ~L~i~~l~~~~~~----~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~-~~~~r~i 76 (353)
T PRK10851 2 SIEIANIKKSFGR----TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRL-HARDRKV 76 (353)
T ss_pred EEEEEEEEEEeCC----eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-CHHHCCE
Confidence 4889999999953 4699999999999999999999999999999999999999999999999988542 2345789
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhc----CCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCc
Q 000284 529 GVCPQYDILFPELTVREHLEMFAVLK----GVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSK 604 (1723)
Q Consensus 529 g~~~Q~~~l~~~lTv~e~l~~~~~~~----g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~ 604 (1723)
|||||++.+|+++||+||+.+..... +.+.++.+++++++++.++|.+..++++.+|||||||||+|||||+.+|+
T Consensus 77 ~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgGq~QRvalArAL~~~P~ 156 (353)
T PRK10851 77 GFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQ 156 (353)
T ss_pred EEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999876542 34566677899999999999999999999999999999999999999999
Q ss_pred EeeccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000284 605 VVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 673 (1723)
Q Consensus 605 vliLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~ 673 (1723)
+|||||||+|||+.+|+.+++.|++++ + |+|+|++|||++++..+||||++|++|+++..|++.++.++
T Consensus 157 llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~ 227 (353)
T PRK10851 157 ILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWRE 227 (353)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999999985 3 89999999999999999999999999999999999888543
No 120
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.6e-43 Score=403.78 Aligned_cols=219 Identities=54% Similarity=0.863 Sum_probs=200.8
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcceE
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 529 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 529 (1723)
|+++||+|.|++. .+.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.......++++|
T Consensus 1 l~~~~l~~~~~~~--~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG--TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC--CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEE
Confidence 4689999999632 14699999999999999999999999999999999999999999999999988654456678899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeecc
Q 000284 530 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 609 (1723)
Q Consensus 530 ~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 609 (1723)
|+||++.+++.+|++||+.+.....+.+..+.+++++++++.++|.+..++++.+||||||||++|||||+.+|+++|||
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllD 158 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKANKRARTLSGGMKRKLSLAIALIGGPSVLLLD 158 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhChhhhCCHHHHHHHHHHHHHhcCCCEEEEC
Confidence 99999999999999999998877777666666778899999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHH
Q 000284 610 EPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 670 (1723)
Q Consensus 610 EPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~L 670 (1723)
|||+|||+.+++.++++|+++++++|||++||+++++..+|||+++|++|++++.|++.++
T Consensus 159 EP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 159 EPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999998789999999999999999999999999999999988765
No 121
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-43 Score=415.42 Aligned_cols=227 Identities=29% Similarity=0.466 Sum_probs=200.0
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC---hHH
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD---PKA 1430 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~---~~~ 1430 (1723)
.|+++||+|.|++... ..+.+|+||||+|++||++||+||||||||||+++|+|+++|++|+|+++|+++... ...
T Consensus 2 ~l~~~~l~~~y~~~~~-~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 80 (287)
T PRK13637 2 SIKIENLTHIYMEGTP-FEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSD 80 (287)
T ss_pred EEEEEEEEEECCCCCc-cccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHH
Confidence 3889999999964210 124699999999999999999999999999999999999999999999999998652 245
Q ss_pred hccceEEEecCCC-CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc--cccCCCCCCCChhHHHHHHHHHHHh
Q 000284 1431 ARRLIGYCPQFDA-LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL--KHAKKPSFTLSGGNKRKLSVAIAMI 1507 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~LSgG~kqrl~iA~al~ 1507 (1723)
.+++|||+||++. .+..+||+||+.+.....+.++++..+++.++++.+||. +..++++++||||||||++||+||+
T Consensus 81 ~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iAraL~ 160 (287)
T PRK13637 81 IRKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIAGVVA 160 (287)
T ss_pred HhhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhhccCCcccCCHHHHHHHHHHHHHH
Confidence 6788999999863 223579999999876666777766777889999999997 5689999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1508 GDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1508 ~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
.+|++|||||||+|||+.+++.++++|++++++.| +|||++|||++++..+||||++|++|++++.|+++++.+
T Consensus 161 ~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g-~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13637 161 MEPKILILDEPTAGLDPKGRDEILNKIKELHKEYN-MTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFK 234 (287)
T ss_pred cCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999999965434 689999999999999999999999999999999998754
No 122
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-43 Score=429.75 Aligned_cols=221 Identities=28% Similarity=0.418 Sum_probs=205.1
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcc
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKG 527 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ 527 (1723)
..++++|++|.|++ ..+++|+||++++||+++|+||||||||||+++|+|+.+|++|+|+++|.++... ...++.
T Consensus 18 ~~l~l~~v~~~~~~----~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~-~~~~r~ 92 (377)
T PRK11607 18 PLLEIRNLTKSFDG----QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHV-PPYQRP 92 (377)
T ss_pred ceEEEEeEEEEECC----EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCC-CHHHCC
Confidence 57999999999953 4699999999999999999999999999999999999999999999999988532 235678
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEee
Q 000284 528 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVI 607 (1723)
Q Consensus 528 ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vli 607 (1723)
+|||||++.+|+++||.||+.+..+.++.+..+.++++.++++.++|.+..++++++|||||||||+|||||+.+|++||
T Consensus 93 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~~~LSgGq~QRVaLARAL~~~P~lLL 172 (377)
T PRK11607 93 INMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKPHQLSGGQRQRVALARSLAKRPKLLL 172 (377)
T ss_pred EEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999999999998877777777888899999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000284 608 LDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 673 (1723)
Q Consensus 608 LDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~ 673 (1723)
|||||++||+.+|+++++.|+++. .|.|+|++|||++|+..+||||++|++|++++.|++.++.++
T Consensus 173 LDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~ 240 (377)
T PRK11607 173 LDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEH 240 (377)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhC
Confidence 999999999999999999998874 389999999999999999999999999999999999888654
No 123
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-43 Score=428.95 Aligned_cols=221 Identities=29% Similarity=0.463 Sum_probs=201.8
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1433 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~ 1433 (1723)
.|+++|++|+|++ +.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. .++
T Consensus 3 ~l~i~~l~~~~~~------~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~-~~~ 75 (369)
T PRK11000 3 SVTLRNVTKAYGD------VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPP-AER 75 (369)
T ss_pred EEEEEEEEEEeCC------eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH-hHC
Confidence 5899999999963 469999999999999999999999999999999999999999999999999865322 346
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000284 1434 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1513 (1723)
Q Consensus 1434 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vl 1513 (1723)
+|||+||++.+++.+||+||+.+....++.+..+.++++.++++.++|.+..++++.+|||||||||+|||||+.+|++|
T Consensus 76 ~i~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~~~~LSgGq~QRvaLAraL~~~P~lL 155 (369)
T PRK11000 76 GVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVF 155 (369)
T ss_pred CEEEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 79999999999999999999998776666666666678899999999998899999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1514 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1514 lLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
||||||+|||+.+++.+++.|+++.++.| +|||++|||++++..+||||++|++|+++..|+++++.+
T Consensus 156 LLDEPts~LD~~~~~~l~~~L~~l~~~~g-~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~ 223 (369)
T PRK11000 156 LLDEPLSNLDAALRVQMRIEISRLHKRLG-RTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYH 223 (369)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHHhC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999865444 589999999999999999999999999999999998864
No 124
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.2e-43 Score=427.25 Aligned_cols=209 Identities=32% Similarity=0.479 Sum_probs=195.2
Q ss_pred ccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHH----hcceEEEccCCCCCC
Q 000284 465 NCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEI----RKGLGVCPQYDILFP 539 (1723)
Q Consensus 465 ~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~----r~~ig~~~Q~~~l~~ 539 (1723)
.+.+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|+++|.++.. +..+. |+++|||||++.+|+
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~ 84 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFP 84 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCC
Confidence 3569999999999999999999999999999999999999999999999999864 33334 678999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeeccCCCCCCCHHH
Q 000284 540 ELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILDEPTSGMDPYS 619 (1723)
Q Consensus 540 ~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLDEPtsgLD~~~ 619 (1723)
++||+||+.+.....|.++++.++++.++++.+||.+..++++++|||||||||+|||||+.+|++|||||||+||||.+
T Consensus 85 ~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~ 164 (363)
T TIGR01186 85 HMTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLI 164 (363)
T ss_pred CCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHH
Confidence 99999999998888888887888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000284 620 MRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 673 (1723)
Q Consensus 620 r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~ 673 (1723)
++++.+.|++++ .|+|||++||+++|+..+||||++|++|+++..|+++++...
T Consensus 165 r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~ 220 (363)
T TIGR01186 165 RDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRN 220 (363)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC
Confidence 999999999985 389999999999999999999999999999999999887653
No 125
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-43 Score=400.99 Aligned_cols=213 Identities=33% Similarity=0.516 Sum_probs=190.3
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1434 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~~ 1434 (1723)
++++|++|.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.... ..+++
T Consensus 1 l~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~-~~~~~ 73 (213)
T cd03259 1 LELKGLSKTYGS------VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVP-PERRN 73 (213)
T ss_pred CeeeeeEEEeCC------eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCc-hhhcc
Confidence 468999999953 46999999999999999999999999999999999999999999999999886432 24567
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000284 1435 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1514 (1723)
Q Consensus 1435 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vll 1514 (1723)
+||+||++.+++.+|++||+.+.....+......++++.++++.+++.+..++++.+|||||||||+|||||+.+|++||
T Consensus 74 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~~ll 153 (213)
T cd03259 74 IGMVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNRYPHELSGGQQQRVALARALAREPSLLL 153 (213)
T ss_pred EEEEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999898899999999876555555444455678889999999988999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000284 1515 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1575 (1723)
Q Consensus 1515 LDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g 1575 (1723)
|||||+|||+.+++.+++.|++++++.| +|||++||++++++.+|||+++|++|++++.|
T Consensus 154 lDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 154 LDEPLSALDAKLREELREELKELQRELG-ITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999864444 58999999999999999999999999998765
No 126
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=2.3e-43 Score=424.93 Aligned_cols=211 Identities=27% Similarity=0.448 Sum_probs=195.1
Q ss_pred ccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHh----ccceEEEecCCCCCC
Q 000284 1372 AKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAA----RRLIGYCPQFDALLE 1446 (1723)
Q Consensus 1372 ~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~----~~~ig~~pQ~~~l~~ 1446 (1723)
.+.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|.++.. +.... +++||||||++.+++
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~ 84 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFP 84 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCC
Confidence 4669999999999999999999999999999999999999999999999999875 34344 678999999999999
Q ss_pred CCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHH
Q 000284 1447 YLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIA 1526 (1723)
Q Consensus 1447 ~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vllLDEPT~gLD~~~ 1526 (1723)
.+||+||+.+.....+.++++..+++.++++.++|.+..++++.+|||||||||+|||||+.+|++|||||||+||||.+
T Consensus 85 ~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~ 164 (363)
T TIGR01186 85 HMTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLI 164 (363)
T ss_pred CCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHH
Confidence 99999999988777777777777889999999999989999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000284 1527 KRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1583 (1723)
Q Consensus 1527 ~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~ 1583 (1723)
++.+.+.+.++.++.| +|||++|||++|+..+||||++|++|+++..|+++++..+
T Consensus 165 r~~l~~~l~~l~~~~~-~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~ 220 (363)
T TIGR01186 165 RDSMQDELKKLQATLQ-KTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRN 220 (363)
T ss_pred HHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC
Confidence 9999999999865444 5899999999999999999999999999999999998654
No 127
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-43 Score=429.86 Aligned_cols=219 Identities=28% Similarity=0.483 Sum_probs=202.2
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcce
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGL 528 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~i 528 (1723)
.++++||+|.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++.... ..++.+
T Consensus 3 ~l~i~~l~~~~~~----~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~-~~~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYGD----VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVP-PAERGV 77 (369)
T ss_pred EEEEEEEEEEeCC----eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCC-HhHCCE
Confidence 4899999999953 46999999999999999999999999999999999999999999999999885322 235679
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeec
Q 000284 529 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVIL 608 (1723)
Q Consensus 529 g~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliL 608 (1723)
||+||++.+|+++||+||+.++...++.+.++.+++++++++.+||.+..++++.+|||||||||+|||||+.+|++|||
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~~~~LSgGq~QRvaLAraL~~~P~lLLL 157 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLL 157 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999999999987777777777778899999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 609 DEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 609 DEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
||||+|||+.+++.+++.|+++. + |+|+|++||+++++..+||||++|++|++++.|++.++..
T Consensus 158 DEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~ 223 (369)
T PRK11000 158 DEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYH 223 (369)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999984 3 8999999999999999999999999999999999988754
No 128
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-43 Score=401.69 Aligned_cols=211 Identities=33% Similarity=0.538 Sum_probs=191.5
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcceE
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 529 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 529 (1723)
++++|++|.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...++.+|
T Consensus 1 l~~~~l~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~-~~~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYGS----VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGV-PPERRNIG 75 (213)
T ss_pred CeeeeeEEEeCC----eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcC-chhhccEE
Confidence 468999999953 4699999999999999999999999999999999999999999999999987532 22457899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeecc
Q 000284 530 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 609 (1723)
Q Consensus 530 ~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 609 (1723)
|+||++.+++.+|++||+.+.....+......+++++++++.+|+.+..++++.+||||||||++|||||+.+|+++|||
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~~lllD 155 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNRYPHELSGGQQQRVALARALAREPSLLLLD 155 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999999999999988765555555566678899999999998899999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEec
Q 000284 610 EPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 665 (1723)
Q Consensus 610 EPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~G 665 (1723)
|||+|||+.+++.++++|++++ .|+|||++||++++++.+||||++|++|++++.|
T Consensus 156 EPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 156 EPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999985 3899999999999999999999999999998765
No 129
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-43 Score=426.33 Aligned_cols=229 Identities=24% Similarity=0.418 Sum_probs=203.4
Q ss_pred eEEEEeEEEEcCCCCc------------------cCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCce
Q 000284 1354 IIYLRNLRKVYPGGKR------------------SDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDG 1415 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~------------------~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G 1415 (1723)
+|+++||+|.|+.... .+...+|+|+||+|++||+++|+||||||||||+|+|+|+++|++|
T Consensus 4 ~i~~~~~~k~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG 83 (400)
T PRK10070 4 KLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRG 83 (400)
T ss_pred EEEEeeeEEecCCChHHHHHHHhccccHHHHHhhcCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCC
Confidence 6889999999876321 1234589999999999999999999999999999999999999999
Q ss_pred EEEEcCeeCCCC-hHH----hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCC
Q 000284 1416 TAFIFGKDIRSD-PKA----ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSF 1490 (1723)
Q Consensus 1416 ~i~i~G~~i~~~-~~~----~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 1490 (1723)
+|+++|.++... ... .+++|||+||++.+++.+|++||+.+....++.+..+.++++.++++.++|.+..++++.
T Consensus 84 ~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~~ 163 (400)
T PRK10070 84 QVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYPD 163 (400)
T ss_pred EEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCcc
Confidence 999999998652 222 246799999999999999999999988777776666666778899999999989999999
Q ss_pred CCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCE
Q 000284 1491 TLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQ 1570 (1723)
Q Consensus 1491 ~LSgG~kqrl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~ 1570 (1723)
+|||||||||+|||||+.+|++|||||||+|||+.+++.+++.|+++.++.| +|||++|||++++..+||||++|++|+
T Consensus 164 ~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g-~TIIivTHd~~~~~~~~Dri~vL~~G~ 242 (400)
T PRK10070 164 ELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQ-RTIVFISHDLDEAMRIGDRIAIMQNGE 242 (400)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCC-CeEEEEECCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999999999999999864444 689999999999999999999999999
Q ss_pred EEEecChhHHHhh
Q 000284 1571 LRCIGSPQHLKTR 1583 (1723)
Q Consensus 1571 l~~~g~~~~l~~~ 1583 (1723)
+++.|+++++..+
T Consensus 243 i~~~g~~~~l~~~ 255 (400)
T PRK10070 243 VVQVGTPDEILNN 255 (400)
T ss_pred EEecCCHHHHHhC
Confidence 9999999988654
No 130
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=2.5e-43 Score=401.03 Aligned_cols=210 Identities=26% Similarity=0.475 Sum_probs=190.9
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc----cHHHHh
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA----DMDEIR 525 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~----~~~~~r 525 (1723)
++++|+++.|++. .+.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .....|
T Consensus 2 l~~~~l~~~~~~~--~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (216)
T TIGR00960 2 IRFEQVSKAYPGG--HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLR 79 (216)
T ss_pred eEEEEEEEEecCC--CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHH
Confidence 7899999999632 2369999999999999999999999999999999999999999999999998743 123467
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcE
Q 000284 526 KGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 605 (1723)
Q Consensus 526 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 605 (1723)
+.+||+||++.+++.+||.||+.+.....+...++.++++.++++.+|+.+..++++.+||||||||++|||||+.+|++
T Consensus 80 ~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (216)
T TIGR00960 80 RHIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALPMQLSGGEQQRVAIARAIVHKPPL 159 (216)
T ss_pred HhceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 88999999999999999999999877666665556677899999999999989999999999999999999999999999
Q ss_pred eeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEE
Q 000284 606 VILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSL 661 (1723)
Q Consensus 606 liLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l 661 (1723)
|||||||+|||+.+++.++++|++++ +|+|||++||+++++..+||||++|++|++
T Consensus 160 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 160 LLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999985 489999999999999999999999999974
No 131
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-43 Score=414.30 Aligned_cols=224 Identities=31% Similarity=0.513 Sum_probs=200.3
Q ss_pred eEEEEeEEEEecCcCC-ccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCcc---HHHH
Q 000284 449 CIQIRKLHKVYATKRG-NCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITAD---MDEI 524 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~-~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~---~~~~ 524 (1723)
+|+++||+|.|++..+ .+.+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|+++|.++... ....
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 4889999999964221 24699999999999999999999999999999999999999999999999988642 3466
Q ss_pred hcceEEEccCCC-CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC--cccccccCCCChhHHHHHHHHHHHhc
Q 000284 525 RKGLGVCPQYDI-LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA--DKVNIVVRALSGGMKRKLSLGIALIG 601 (1723)
Q Consensus 525 r~~ig~~~Q~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~--~~~~~~~~~LSgGqkqrl~lA~al~~ 601 (1723)
++.+|||||++. .+...||+||+.+.....+.+.++.++++.++++.+||. +..++++++||||||||++||+||+.
T Consensus 82 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iAraL~~ 161 (287)
T PRK13637 82 RKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIAGVVAM 161 (287)
T ss_pred hhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhhccCCcccCCHHHHHHHHHHHHHHc
Confidence 789999999973 233579999999877667777777888899999999997 67899999999999999999999999
Q ss_pred CCcEeeccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 602 DSKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 602 ~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
+|++|||||||+|||+.++++++++|++++ + |+|||++||+++++..+||||++|++|++++.|++.++.+
T Consensus 162 ~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13637 162 EPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFK 234 (287)
T ss_pred CCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 999999999999999999999999999985 3 8999999999999999999999999999999999877643
No 132
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=6e-43 Score=426.10 Aligned_cols=227 Identities=26% Similarity=0.456 Sum_probs=201.3
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHh
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAA 1431 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~ 1431 (1723)
++|+++||+|.|++ +.+|+|+||+|++||++||+||||||||||+|+|+|+++|++|+|+++|+++.. ...+.
T Consensus 2 ~~L~~~nls~~y~~------~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~ 75 (402)
T PRK09536 2 PMIDVSDLSVEFGD------TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAA 75 (402)
T ss_pred ceEEEeeEEEEECC------EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHH
Confidence 36899999999963 569999999999999999999999999999999999999999999999999876 45667
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHc--CCC--hhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHh
Q 000284 1432 RRLIGYCPQFDALLEYLTVQEHLELYARIK--GVA--EYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMI 1507 (1723)
Q Consensus 1432 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~--g~~--~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~ 1507 (1723)
+++|||+||++.+++.+|++||+.+....+ ... ....+++++++++.+++.+..++++.+||||||||++|||||+
T Consensus 76 ~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~~~LSgGerQRv~IArAL~ 155 (402)
T PRK09536 76 SRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPVTSLSGGERQRVLLARALA 155 (402)
T ss_pred hcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHH
Confidence 788999999999988999999998743211 111 2334567889999999999999999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH------HH
Q 000284 1508 GDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH------LK 1581 (1723)
Q Consensus 1508 ~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~------l~ 1581 (1723)
++|++|||||||+|||+.+++.++++|+++++ +| +|||++|||++++.++|||+++|++|++++.|++++ +.
T Consensus 156 ~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~g-~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~~~l~ 233 (402)
T PRK09536 156 QATPVLLLDEPTASLDINHQVRTLELVRRLVD-DG-KTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTADTLR 233 (402)
T ss_pred cCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-cC-CEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCcHHHH
Confidence 99999999999999999999999999999964 44 589999999999999999999999999999999987 44
Q ss_pred hhcCCe
Q 000284 1582 TRFGNF 1587 (1723)
Q Consensus 1582 ~~~~~~ 1587 (1723)
+.|+..
T Consensus 234 ~~~~~~ 239 (402)
T PRK09536 234 AAFDAR 239 (402)
T ss_pred HHhCCc
Confidence 566543
No 133
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=4.5e-43 Score=399.48 Aligned_cols=218 Identities=33% Similarity=0.555 Sum_probs=195.8
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1433 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~ 1433 (1723)
+++++|++|+|++.. ....+++++||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.......++
T Consensus 1 ~l~~~~v~~~~~~~~--~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 78 (218)
T cd03266 1 MITADALTKRFRDVK--KTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARR 78 (218)
T ss_pred CeEEEEEEEecCCCC--ccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHh
Confidence 478999999996421 112699999999999999999999999999999999999999999999999998755555678
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000284 1434 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1513 (1723)
Q Consensus 1434 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vl 1513 (1723)
++||+||++.+++.+|++||+.+....++.+..+..+++.++++.+++.+..++++.+||||||||++|||||+.+|++|
T Consensus 79 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~il 158 (218)
T cd03266 79 RLGFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELLDRRVGGFSTGMRQKVAIARALVHDPPVL 158 (218)
T ss_pred hEEEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhhhhhhcCHHHHHHHHHHHHHhcCCCEE
Confidence 89999999999998999999998776666655556678889999999998899999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000284 1514 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1575 (1723)
Q Consensus 1514 lLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g 1575 (1723)
||||||+|||+.+++.+++.|++++ ++| +|||++||+++++..+|||+++|++|++++.|
T Consensus 159 llDEPt~~LD~~~~~~l~~~l~~~~-~~~-~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 159 LLDEPTTGLDVMATRALREFIRQLR-ALG-KCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred EEcCCCcCCCHHHHHHHHHHHHHHH-HCC-CEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999985 344 58999999999999999999999999998754
No 134
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.3e-43 Score=403.00 Aligned_cols=222 Identities=32% Similarity=0.502 Sum_probs=199.5
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCcc----HHHHh
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITAD----MDEIR 525 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~----~~~~r 525 (1723)
|+++|+++.|+++.+.+.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ....+
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 78999999996431123699999999999999999999999999999999999999999999999987532 12357
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcE
Q 000284 526 KGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 605 (1723)
Q Consensus 526 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 605 (1723)
+.+||+||++.+++.+|++||+.+.....+.......+++.++++.+||.+..++++.+||||||||++||+||+.+|++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 161 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADAYPAQLSGGQKQRVGIARALANNPKV 161 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 78999999999999999999998876666665555667889999999999889999999999999999999999999999
Q ss_pred eeccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 606 VILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 606 liLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
+||||||+|||+.+++.++++|++++ + |+|||++||+++++..+|||+++|++|++++.|++.++.
T Consensus 162 llLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (233)
T cd03258 162 LLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVF 229 (233)
T ss_pred EEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 99999999999999999999999985 3 899999999999999999999999999999999887664
No 135
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.3e-43 Score=403.74 Aligned_cols=221 Identities=29% Similarity=0.452 Sum_probs=195.7
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1433 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~ 1433 (1723)
+++++|++|.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++..... .++
T Consensus 2 ~l~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~-~~~ 74 (239)
T cd03296 2 SIEVRNVSKRFGD------FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV-QER 74 (239)
T ss_pred EEEEEeEEEEECC------EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc-ccc
Confidence 4889999999963 469999999999999999999999999999999999999999999999998754222 356
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCC----ChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000284 1434 LIGYCPQFDALLEYLTVQEHLELYARIKGV----AEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1509 (1723)
Q Consensus 1434 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~----~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~ 1509 (1723)
++||+||++.+++.+|++||+.+.....+. ...+..+.+.++++.+++.+..++++.+|||||||||+||+||+.+
T Consensus 75 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 154 (239)
T cd03296 75 NVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYPAQLSGGQRQRVALARALAVE 154 (239)
T ss_pred ceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcC
Confidence 799999999998889999999876554432 2233445678899999998888999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1510 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1510 p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
|++|||||||+|||+.+++.+++.|++++++.| +|||++||+++++..+|||+++|++|++++.|+++++.+
T Consensus 155 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 155 PKVLLLDEPFGALDAKVRKELRRWLRRLHDELH-VTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 999999999999999999999999999864434 589999999999999999999999999999999988753
No 136
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-43 Score=426.13 Aligned_cols=225 Identities=30% Similarity=0.467 Sum_probs=201.8
Q ss_pred eEEEEeEEEEecCcC--------------------CccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcc
Q 000284 449 CIQIRKLHKVYATKR--------------------GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTG 508 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~--------------------~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G 508 (1723)
.|+++||+|.|+... +...+|+|+||+|++||+++|+||||||||||+++|+|+++|++|
T Consensus 4 ~i~~~~~~k~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG 83 (400)
T PRK10070 4 KLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRG 83 (400)
T ss_pred EEEEeeeEEecCCChHHHHHHHhccccHHHHHhhcCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCC
Confidence 577778888776532 123489999999999999999999999999999999999999999
Q ss_pred eEEEccccCCc-cHH---H-HhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccC
Q 000284 509 DALVFGKNITA-DMD---E-IRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVR 583 (1723)
Q Consensus 509 ~i~i~g~~i~~-~~~---~-~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~ 583 (1723)
+|+++|.++.. +.. + .++++||+||++.+|+.+||+||+.+....++.+.++.++++.++++.+||.+..+++++
T Consensus 84 ~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~~ 163 (400)
T PRK10070 84 QVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYPD 163 (400)
T ss_pred EEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCcc
Confidence 99999999863 222 2 246899999999999999999999998877777777777889999999999999999999
Q ss_pred CCChhHHHHHHHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEE
Q 000284 584 ALSGGMKRKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSL 661 (1723)
Q Consensus 584 ~LSgGqkqrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l 661 (1723)
+||||||||++|||||+.+|++|||||||+|||+.+++.+++.|++++ .|+|||++||+++++..+||||++|++|++
T Consensus 164 ~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i 243 (400)
T PRK10070 164 ELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEV 243 (400)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999984 489999999999999999999999999999
Q ss_pred EEecCHHHHHhh
Q 000284 662 KCCGSSLFLKHQ 673 (1723)
Q Consensus 662 ~~~Gs~~~Lk~~ 673 (1723)
++.|++.++...
T Consensus 244 ~~~g~~~~l~~~ 255 (400)
T PRK10070 244 VQVGTPDEILNN 255 (400)
T ss_pred EecCCHHHHHhC
Confidence 999999887543
No 137
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.1e-43 Score=401.92 Aligned_cols=226 Identities=30% Similarity=0.497 Sum_probs=199.1
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h---H
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P---K 1429 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-~---~ 1429 (1723)
+|+++|++|+|++.. +.+.+++++||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++... . .
T Consensus 1 ~i~~~~l~~~~~~~~--~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (233)
T cd03258 1 MIELKNVSKVFGDTG--GKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELR 78 (233)
T ss_pred CeEEecceEEccCCC--CceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHH
Confidence 478999999996320 112699999999999999999999999999999999999999999999999998642 2 2
Q ss_pred HhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000284 1430 AARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1509 (1723)
Q Consensus 1430 ~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~ 1509 (1723)
..++.+||+||++.+++.+|++||+.+....++.......+.+.++++.+++.+..++++.+||||||||++||+||+.+
T Consensus 79 ~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 158 (233)
T cd03258 79 KARRRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADAYPAQLSGGQKQRVGIARALANN 158 (233)
T ss_pred HHHhheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhcChhhCCHHHHHHHHHHHHHhcC
Confidence 34678999999999999899999998766555555444556788899999999889999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1510 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1510 p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
|++|||||||+|||+.+++.+++.|++++++.| +|||++||++++++.+|||+++|++|++++.|+++++.+
T Consensus 159 p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 159 PKVLLCDEATSALDPETTQSILALLRDINRELG-LTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred CCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 999999999999999999999999999864434 689999999999999999999999999999999887753
No 138
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=5.3e-43 Score=398.26 Aligned_cols=212 Identities=31% Similarity=0.493 Sum_probs=189.2
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC----hH
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD----PK 1429 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~----~~ 1429 (1723)
+|+++|++++|+++ .+.+++++||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++... ..
T Consensus 1 ~l~~~~l~~~~~~~----~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 76 (216)
T TIGR00960 1 MIRFEQVSKAYPGG----HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIP 76 (216)
T ss_pred CeEEEEEEEEecCC----CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHH
Confidence 47899999999631 24599999999999999999999999999999999999999999999999988542 12
Q ss_pred HhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000284 1430 AARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1509 (1723)
Q Consensus 1430 ~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~ 1509 (1723)
..++++||+||++.+++.+|++||+.+.....+......++++.++++.+++.+..++++.+|||||||||+|||||+.+
T Consensus 77 ~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~ 156 (216)
T TIGR00960 77 FLRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALPMQLSGGEQQRVAIARAIVHK 156 (216)
T ss_pred HHHHhceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 35678999999999999999999998876665655445566788999999999889999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEE
Q 000284 1510 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQL 1571 (1723)
Q Consensus 1510 p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l 1571 (1723)
|++|||||||+|||+.+++.+++.|+++++ +| +|||++|||+++++.+|||+++|++|++
T Consensus 157 p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 157 PPLLLADEPTGNLDPELSRDIMRLFEEFNR-RG-TTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999853 44 5899999999999999999999999974
No 139
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=7e-43 Score=398.46 Aligned_cols=220 Identities=55% Similarity=0.928 Sum_probs=198.4
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1434 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~~ 1434 (1723)
|+++|++|.|+++ .+.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.......+++
T Consensus 1 l~~~~l~~~~~~~----~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (220)
T cd03263 1 LQIRNLTKTYKKG----TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQS 76 (220)
T ss_pred CEEEeeEEEeCCC----CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhh
Confidence 4689999999631 246999999999999999999999999999999999999999999999999986544556778
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000284 1435 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1514 (1723)
Q Consensus 1435 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vll 1514 (1723)
+||+||++.+++.+|++||+.+....++.+.....+.+.++++.++|.+..++++.+||||||||++|||||+.+|++||
T Consensus 77 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~lll 156 (220)
T cd03263 77 LGYCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKANKRARTLSGGMKRKLSLAIALIGGPSVLL 156 (220)
T ss_pred EEEecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhChhhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999998899999999987776666555555678889999999888899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000284 1515 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1581 (1723)
Q Consensus 1515 LDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~ 1581 (1723)
|||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|++|++++.|++++++
T Consensus 157 lDEP~~~LD~~~~~~l~~~l~~~~-~-~-~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 220 (220)
T cd03263 157 LDEPTSGLDPASRRAIWDLILEVR-K-G-RSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQELK 220 (220)
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHh-c-C-CEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHcC
Confidence 999999999999999999999985 3 3 58999999999999999999999999999999988753
No 140
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.1e-42 Score=401.08 Aligned_cols=223 Identities=27% Similarity=0.471 Sum_probs=199.3
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1433 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~ 1433 (1723)
+++++|++++|++ +.+++++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.......++
T Consensus 1 ~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~ 74 (236)
T TIGR03864 1 ALEVAGLSFAYGA------RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALA 74 (236)
T ss_pred CEEEEeeEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhh
Confidence 4789999999953 4699999999999999999999999999999999999999999999999988653334456
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000284 1434 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1513 (1723)
Q Consensus 1434 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vl 1513 (1723)
.++|+||++.+++.+|++||+.+....++.+.....+.+.++++.+|+.+..++++.+||||||||++|||||+.+|++|
T Consensus 75 ~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~laral~~~p~ll 154 (236)
T TIGR03864 75 RLGVVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAERADDKVRELNGGHRRRVEIARALLHRPALL 154 (236)
T ss_pred hEEEeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 89999999988888999999988776665554445567888999999998899999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhc
Q 000284 1514 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRF 1584 (1723)
Q Consensus 1514 lLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~~ 1584 (1723)
||||||+|||+.+++.+++.|+++++++| +|||++||++++++. |||+++|++|++++.|+++++.+.+
T Consensus 155 llDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tiii~sH~~~~~~~-~d~i~~l~~G~i~~~~~~~~~~~~~ 223 (236)
T TIGR03864 155 LLDEPTVGLDPASRAAIVAHVRALCRDQG-LSVLWATHLVDEIEA-DDRLVVLHRGRVLADGAAAELRGAL 223 (236)
T ss_pred EEcCCccCCCHHHHHHHHHHHHHHHHhCC-CEEEEEecChhhHhh-CCEEEEEeCCeEEEeCCHHHHHHHc
Confidence 99999999999999999999999864444 589999999999985 9999999999999999999887654
No 141
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.4e-43 Score=396.18 Aligned_cols=211 Identities=34% Similarity=0.620 Sum_probs=193.7
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcceE
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 529 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 529 (1723)
|+++|+++.|++ +.+++|+||++++| +++|+||||||||||+++|+|+++|++|+|.++|.++.......++.+|
T Consensus 1 i~~~~~~~~~~~----~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGK----KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECC----EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheE
Confidence 468999999953 36999999999999 9999999999999999999999999999999999988643355678899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeecc
Q 000284 530 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 609 (1723)
Q Consensus 530 ~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 609 (1723)
|+||++.+|+.+||.||+.+.....+.+.++.+++++++++.+|+.+..++++.+||||||||++|||||+.+|+++|||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllD 155 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAKKKIGSLSGGMRRRVGIAQALVGDPSILIVD 155 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHhCchhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999999999999998776666665566778999999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEec
Q 000284 610 EPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 665 (1723)
Q Consensus 610 EPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~G 665 (1723)
|||+|||+.++++++++|+++++++|||++||+++++..+|||+++|++|++++.|
T Consensus 156 EPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 156 EPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred CCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999987799999999999999999999999999998754
No 142
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1e-42 Score=420.75 Aligned_cols=228 Identities=25% Similarity=0.422 Sum_probs=200.5
Q ss_pred EEEEeEEEEcCCCC------------------ccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceE
Q 000284 1355 IYLRNLRKVYPGGK------------------RSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGT 1416 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~------------------~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~ 1416 (1723)
|+++||.|.||.+. +.+...+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+
T Consensus 1 ~~~~~~~k~fg~~~~~~~~~~~~g~~~~~~~~~~g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~ 80 (382)
T TIGR03415 1 IDFKNVDVVFGDQPAEALALLDQGKTREEILDETGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGS 80 (382)
T ss_pred CEEEeeEEeeCCCHHHHHHHHHcCCCHHHHHHhhCCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcE
Confidence 35677777776532 124567999999999999999999999999999999999999999999
Q ss_pred EEEcCe----eCCC-ChH---Hh-ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCC
Q 000284 1417 AFIFGK----DIRS-DPK---AA-RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKK 1487 (1723)
Q Consensus 1417 i~i~G~----~i~~-~~~---~~-~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~ 1487 (1723)
|+++|+ ++.. ... +. +++|||+||++.+++.+|++||+.+.....+.++.+.++++.++++.+||.+..++
T Consensus 81 I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~ 160 (382)
T TIGR03415 81 VLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFALMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADK 160 (382)
T ss_pred EEECCEecccccccCCHHHHHHHhcCCEEEEECCCcCCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcC
Confidence 999997 4433 222 22 35799999999999999999999988777777766667788999999999999999
Q ss_pred CCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEE
Q 000284 1488 PSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMV 1567 (1723)
Q Consensus 1488 ~~~~LSgG~kqrl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~ 1567 (1723)
++.+||||||||++|||||+.+|+||||||||+||||.+++.+++.|.++.++.+ +|||++|||++++.++||||++|+
T Consensus 161 ~~~~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~-~TII~iTHdl~e~~~l~DrI~vl~ 239 (382)
T TIGR03415 161 KPGELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKLN-KTIIFVSHDLDEALKIGNRIAIME 239 (382)
T ss_pred ChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEE
Confidence 9999999999999999999999999999999999999999999999999865444 689999999999999999999999
Q ss_pred CCEEEEecChhHHHhh
Q 000284 1568 GGQLRCIGSPQHLKTR 1583 (1723)
Q Consensus 1568 ~G~l~~~g~~~~l~~~ 1583 (1723)
+|+++..|+++++..+
T Consensus 240 ~G~iv~~g~~~ei~~~ 255 (382)
T TIGR03415 240 GGRIIQHGTPEEIVLN 255 (382)
T ss_pred CCEEEEecCHHHHhhC
Confidence 9999999999998653
No 143
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9e-43 Score=397.46 Aligned_cols=216 Identities=30% Similarity=0.486 Sum_probs=192.3
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1434 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~~ 1434 (1723)
|+++|++|.|++.. +.+.+++++||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++.. .++.
T Consensus 1 l~~~~l~~~~~~~~--~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~----~~~~ 74 (220)
T cd03293 1 LEVRNVSKTYGGGG--GAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG----PGPD 74 (220)
T ss_pred CeEEEEEEEcCCCC--cceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc----ccCc
Confidence 46899999996421 11469999999999999999999999999999999999999999999999998752 3567
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000284 1435 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1514 (1723)
Q Consensus 1435 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vll 1514 (1723)
+||+||++.+++.+|++||+.+....++.+.....+.+.++++.+++.+..++++.+||||||||++|||||+.+|++||
T Consensus 75 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~lll 154 (220)
T cd03293 75 RGYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENAYPHQLSGGMRQRVALARALAVDPDVLL 154 (220)
T ss_pred EEEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 99999999898889999999887666665555556678899999999988899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEE--CCEEEEecCh
Q 000284 1515 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMV--GGQLRCIGSP 1577 (1723)
Q Consensus 1515 LDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~--~G~l~~~g~~ 1577 (1723)
|||||+|||+.+++.+++.|+++.++.| +|||++||+++++..+|||+++|+ +|++++.++.
T Consensus 155 LDEPt~~LD~~~~~~~~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 155 LDEPFSALDALTREQLQEELLDIWRETG-KTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHHHHcC-CEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999854444 589999999999999999999999 7999988765
No 144
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.7e-43 Score=413.70 Aligned_cols=222 Identities=27% Similarity=0.463 Sum_probs=199.4
Q ss_pred eEEEEeEEEEecCcC-CccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc--------
Q 000284 449 CIQIRKLHKVYATKR-GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-------- 519 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~-~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-------- 519 (1723)
.|+++||++.|+++. ....+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|+++|.++..
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 388999999996432 12369999999999999999999999999999999999999999999999876521
Q ss_pred -----------------cHHHHhcceEEEccCC--CCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-cccc
Q 000284 520 -----------------DMDEIRKGLGVCPQYD--ILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA-DKVN 579 (1723)
Q Consensus 520 -----------------~~~~~r~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~-~~~~ 579 (1723)
.....++.+|||||++ .++ ..||+||+.|.....+.+.++.++++.++++.+||. +..+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~-~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~ 160 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLF-EQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQ 160 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccc-cccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhh
Confidence 2345678999999986 344 579999999887777888888888999999999997 6789
Q ss_pred cccCCCChhHHHHHHHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeC
Q 000284 580 IVVRALSGGMKRKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMAN 658 (1723)
Q Consensus 580 ~~~~~LSgGqkqrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~ 658 (1723)
+++.+||||||||++||+||+.+|++|||||||+|||+.+++.++++|++++ +|+|||++||+++++..+||||++|++
T Consensus 161 ~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv~vl~~ 240 (305)
T PRK13651 161 RSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRTIFFKD 240 (305)
T ss_pred CChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999999999999999999985 589999999999999999999999999
Q ss_pred CEEEEecCHHHHH
Q 000284 659 GSLKCCGSSLFLK 671 (1723)
Q Consensus 659 G~l~~~Gs~~~Lk 671 (1723)
|++++.|++.++.
T Consensus 241 G~i~~~g~~~~~~ 253 (305)
T PRK13651 241 GKIIKDGDTYDIL 253 (305)
T ss_pred CEEEEECCHHHHh
Confidence 9999999987764
No 145
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-42 Score=411.14 Aligned_cols=225 Identities=27% Similarity=0.423 Sum_probs=198.2
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-----ChH
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-----DPK 1429 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-----~~~ 1429 (1723)
++++||+|+|++... ..+.+|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++.. ...
T Consensus 3 l~~~~l~~~y~~~~~-~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (290)
T PRK13634 3 ITFQKVEHRYQYKTP-FERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLK 81 (290)
T ss_pred EEEEEEEEEECCCCc-ccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 789999999964211 12469999999999999999999999999999999999999999999999999852 234
Q ss_pred HhccceEEEecCC--CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHHH
Q 000284 1430 AARRLIGYCPQFD--ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIAM 1506 (1723)
Q Consensus 1430 ~~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~kqrl~iA~al 1506 (1723)
..+++||||||++ .++ ..||+||+.+.....+.+..+.++++.++++.++|. +..++++.+|||||||||+||+||
T Consensus 82 ~~~~~ig~v~q~~~~~l~-~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lAraL 160 (290)
T PRK13634 82 PLRKKVGIVFQFPEHQLF-EETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELLARSPFELSGGQMRRVAIAGVL 160 (290)
T ss_pred HHHhhEEEEeeCchhhhh-hhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhhhCCcccCCHHHHHHHHHHHHH
Confidence 5677899999986 455 479999998876656666666667888999999997 567999999999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1507 IGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1507 ~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
+.+|++|||||||+|||+.+++.++++|++++++.| .|||++|||++++..+||||++|++|++++.|+++++.+
T Consensus 161 ~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g-~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 235 (290)
T PRK13634 161 AMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKG-LTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIFA 235 (290)
T ss_pred HcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999999999999999999999965445 589999999999999999999999999999999988753
No 146
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-42 Score=411.57 Aligned_cols=222 Identities=30% Similarity=0.469 Sum_probs=200.0
Q ss_pred eEEEEeEEEEecCcC-CccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-----cHH
Q 000284 449 CIQIRKLHKVYATKR-GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-----DMD 522 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~-~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-----~~~ 522 (1723)
+|+++||++.|+.+. ..+.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|.++.. ...
T Consensus 1 mi~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 80 (288)
T PRK13643 1 MIKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIK 80 (288)
T ss_pred CEEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHH
Confidence 378999999996422 12359999999999999999999999999999999999999999999999998742 245
Q ss_pred HHhcceEEEccCC--CCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-cccccccCCCChhHHHHHHHHHHH
Q 000284 523 EIRKGLGVCPQYD--ILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA-DKVNIVVRALSGGMKRKLSLGIAL 599 (1723)
Q Consensus 523 ~~r~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~LSgGqkqrl~lA~al 599 (1723)
..|+.+||++|++ .+++ .||.||+.|.....+.+..+.++++.++++.+||. +..++.+.+||||||||++||+||
T Consensus 81 ~~~~~ig~v~q~~~~~l~~-~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~LSgGqkqrvaiA~aL 159 (288)
T PRK13643 81 PVRKKVGVVFQFPESQLFE-ETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWEKSPFELSGGQMRRVAIAGIL 159 (288)
T ss_pred HHHhhEEEEecCcchhccc-chHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhccCCcccCCHHHHHHHHHHHHH
Confidence 6788999999987 5665 59999999887666777777888899999999996 567999999999999999999999
Q ss_pred hcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 600 IGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 600 ~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
+.+|++|||||||+|||+.+++.++++|++++ +|+|||++||+++++..+||||++|++|++++.|++.++.
T Consensus 160 ~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 232 (288)
T PRK13643 160 AMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVF 232 (288)
T ss_pred HhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999999986 5899999999999999999999999999999999998764
No 147
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.1e-42 Score=423.86 Aligned_cols=225 Identities=26% Similarity=0.446 Sum_probs=202.4
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhcc
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 527 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 527 (1723)
.++++||++.|+ ++.+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. ...+.+++
T Consensus 3 ~L~~~nls~~y~----~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ 78 (402)
T PRK09536 3 MIDVSDLSVEFG----DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRR 78 (402)
T ss_pred eEEEeeEEEEEC----CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcc
Confidence 689999999995 3569999999999999999999999999999999999999999999999998864 45667889
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhc--CCC--HHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCC
Q 000284 528 LGVCPQYDILFPELTVREHLEMFAVLK--GVK--EELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDS 603 (1723)
Q Consensus 528 ig~~~Q~~~l~~~lTv~e~l~~~~~~~--g~~--~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p 603 (1723)
+||+||++.+++.+||+||+.+....+ .+. ....+++++++++.+|+.+..++++.+||||||||++|||||+++|
T Consensus 79 ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~~~LSgGerQRv~IArAL~~~P 158 (402)
T PRK09536 79 VASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPVTSLSGGERQRVLLARALAQAT 158 (402)
T ss_pred eEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCC
Confidence 999999999988999999998754221 111 2345678899999999999999999999999999999999999999
Q ss_pred cEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHH------HHhhhCC
Q 000284 604 KVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLF------LKHQYGV 676 (1723)
Q Consensus 604 ~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~------Lk~~~g~ 676 (1723)
++|||||||+|||+.++++++++|+++. +|+|||++||+++++..+|||+++|++|++++.|++++ +.+.|+.
T Consensus 159 ~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~~~l~~~~~~ 238 (402)
T PRK09536 159 PVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTADTLRAAFDA 238 (402)
T ss_pred CEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCcHHHHHHhCC
Confidence 9999999999999999999999999986 58999999999999999999999999999999999986 5666664
Q ss_pred c
Q 000284 677 G 677 (1723)
Q Consensus 677 g 677 (1723)
.
T Consensus 239 ~ 239 (402)
T PRK09536 239 R 239 (402)
T ss_pred c
Confidence 3
No 148
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=9.4e-43 Score=401.75 Aligned_cols=218 Identities=32% Similarity=0.534 Sum_probs=195.6
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHH-Hhcc
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDE-IRKG 527 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~-~r~~ 527 (1723)
++++||++.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .... .++.
T Consensus 1 l~~~~l~~~~~~----~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 76 (236)
T cd03219 1 LEVRGLTKRFGG----LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLG 76 (236)
T ss_pred CeeeeeEEEECC----EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcC
Confidence 468999999953 469999999999999999999999999999999999999999999999998754 2222 3567
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCC----------CHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHH
Q 000284 528 LGVCPQYDILFPELTVREHLEMFAVLKGV----------KEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGI 597 (1723)
Q Consensus 528 ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~----------~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~ 597 (1723)
+||+||++.+++.+||+||+.+.....+. ...+.+++++++++.+|+.+..++++++||||||||++|||
T Consensus 77 i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~ 156 (236)
T cd03219 77 IGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPAGELSYGQQRRLEIAR 156 (236)
T ss_pred EEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCChhhCCHHHHHHHHHHH
Confidence 99999999999999999999887654332 23445667899999999998889999999999999999999
Q ss_pred HHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 598 ALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 598 al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
||+.+|+++||||||+|||+.+++.++++|++++ +|+|||++||+++++..+||||++|++|++.+.|++.++.
T Consensus 157 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (236)
T cd03219 157 ALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVR 231 (236)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhc
Confidence 9999999999999999999999999999999986 6899999999999999999999999999999999987764
No 149
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=9.3e-43 Score=395.45 Aligned_cols=213 Identities=31% Similarity=0.489 Sum_probs=191.2
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1434 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~~ 1434 (1723)
|+++|+++.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++..... .+++
T Consensus 1 i~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~-~~~~ 73 (213)
T cd03301 1 VELENVTKRFGN------VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPP-KDRD 73 (213)
T ss_pred CEEEeeEEEECC------eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc-ccce
Confidence 468999999963 459999999999999999999999999999999999999999999999999854222 2467
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000284 1435 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1514 (1723)
Q Consensus 1435 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vll 1514 (1723)
++|+||++.+++.+|++||+.+.....+....+.++++.++++.+++.+..++++.+||||||||++|||||+.+|++||
T Consensus 74 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~lll 153 (213)
T cd03301 74 IAMVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDRKPKQLSGGQRQRVALGRAIVREPKVFL 153 (213)
T ss_pred EEEEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999898889999999887666565555556678889999999988999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000284 1515 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1575 (1723)
Q Consensus 1515 LDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g 1575 (1723)
|||||+|||+.+++.+++.|++++++.| +|||++||+++++..+|||+++|++|++++.|
T Consensus 154 lDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 154 MDEPLSNLDAKLRVQMRAELKRLQQRLG-TTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 9999999999999999999999864444 58999999999999999999999999998875
No 150
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-42 Score=411.77 Aligned_cols=221 Identities=31% Similarity=0.482 Sum_probs=198.8
Q ss_pred EEEEeEEEEecCcCC-ccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-----cHHH
Q 000284 450 IQIRKLHKVYATKRG-NCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-----DMDE 523 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~-~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-----~~~~ 523 (1723)
++++||+|.|++..+ .+.+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.. ....
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 789999999964221 2469999999999999999999999999999999999999999999999998842 3446
Q ss_pred HhcceEEEccCC--CCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-cccccccCCCChhHHHHHHHHHHHh
Q 000284 524 IRKGLGVCPQYD--ILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA-DKVNIVVRALSGGMKRKLSLGIALI 600 (1723)
Q Consensus 524 ~r~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~LSgGqkqrl~lA~al~ 600 (1723)
.|+.+|||||++ .++ ..||.||+.+.....+.+.++.+++++++++.+||. +..++++.+|||||||||+|||||+
T Consensus 83 ~~~~ig~v~q~~~~~l~-~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lAraL~ 161 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLF-EETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELLARSPFELSGGQMRRVAIAGVLA 161 (290)
T ss_pred HHhhEEEEeeCchhhhh-hhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhhhCCcccCCHHHHHHHHHHHHHH
Confidence 678899999986 456 469999999877666777777778899999999997 5679999999999999999999999
Q ss_pred cCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 601 GDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 601 ~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
.+|++|||||||+|||+.++++++++|++++ + |.|||++||+++++..+||||++|++|++++.|++.++.
T Consensus 162 ~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 234 (290)
T PRK13634 162 MEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIF 234 (290)
T ss_pred cCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 9999999999999999999999999999985 3 899999999999999999999999999999999987764
No 151
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=5.9e-43 Score=398.52 Aligned_cols=211 Identities=31% Similarity=0.517 Sum_probs=188.5
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccH-----HHH
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADM-----DEI 524 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~-----~~~ 524 (1723)
|+++||++.|++.++.+.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.... ...
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 468999999964211146999999999999999999999999999999999999999999999999875311 124
Q ss_pred hcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCc
Q 000284 525 RKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSK 604 (1723)
Q Consensus 525 r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~ 604 (1723)
++.+||+||++.+++.+||+||+.+....++......+++++++++.+||.+..++.+++||||||||++|||||+.+|+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ 160 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRLNHYPSELSGGQQQRVAIARALANDPK 160 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhcChhhcCHHHHHHHHHHHHHccCCC
Confidence 57899999999999999999999987766666555566788999999999988899999999999999999999999999
Q ss_pred EeeccCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCEE
Q 000284 605 VVILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSL 661 (1723)
Q Consensus 605 vliLDEPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~l 661 (1723)
+|||||||+|||+.+++.++++|+++++ |+|||++||++++++ +|||+++|++|++
T Consensus 161 lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~-~~d~v~~l~~G~i 218 (218)
T cd03255 161 IILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAE-YADRIIELRDGKI 218 (218)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHh-hhcEEEEeeCCcC
Confidence 9999999999999999999999999853 899999999999998 8999999999974
No 152
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=9.5e-43 Score=421.09 Aligned_cols=209 Identities=29% Similarity=0.443 Sum_probs=191.7
Q ss_pred ccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccc----cCCc-c---HHHHh-cceEEEccCC
Q 000284 465 NCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGK----NITA-D---MDEIR-KGLGVCPQYD 535 (1723)
Q Consensus 465 ~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~----~i~~-~---~~~~r-~~ig~~~Q~~ 535 (1723)
...+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|+++|. ++.. + ..+.| +++||+||++
T Consensus 36 ~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~ 115 (382)
T TIGR03415 36 LVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKF 115 (382)
T ss_pred CEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCC
Confidence 457999999999999999999999999999999999999999999999996 4432 1 22333 6899999999
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeeccCCCCCC
Q 000284 536 ILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILDEPTSGM 615 (1723)
Q Consensus 536 ~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLDEPtsgL 615 (1723)
.+++.+||+||+.++....|.++.+.++++.++++.+||.+..++++.+||||||||++|||||+.+|+||||||||+||
T Consensus 116 ~l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlDEPts~L 195 (382)
T TIGR03415 116 ALMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKKPGELSGGMQQRVGLARAFAMDADILLMDEPFSAL 195 (382)
T ss_pred cCCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCccC
Confidence 99999999999999877778777777888999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000284 616 DPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 673 (1723)
Q Consensus 616 D~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~ 673 (1723)
||.+++++++.|.++++ ++|||++|||++++..+||||++|++|+++..|++.++..+
T Consensus 196 D~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~ 255 (382)
T TIGR03415 196 DPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLN 255 (382)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC
Confidence 99999999999999853 89999999999999999999999999999999999888543
No 153
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.6e-43 Score=402.26 Aligned_cols=218 Identities=26% Similarity=0.406 Sum_probs=195.6
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcce
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGL 528 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~i 528 (1723)
.++++||++.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.... ..++.+
T Consensus 2 ~l~~~~l~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~i 76 (239)
T cd03296 2 SIEVRNVSKRFGD----FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVP-VQERNV 76 (239)
T ss_pred EEEEEeEEEEECC----EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCC-ccccce
Confidence 3789999999953 46999999999999999999999999999999999999999999999999875321 235679
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCC----CHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCc
Q 000284 529 GVCPQYDILFPELTVREHLEMFAVLKGV----KEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSK 604 (1723)
Q Consensus 529 g~~~Q~~~l~~~lTv~e~l~~~~~~~g~----~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~ 604 (1723)
||+||++.+++.+||.||+.+.....+. ...+.+++++++++.+||.+..++++.+|||||||||+|||||+.+|+
T Consensus 77 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 156 (239)
T cd03296 77 GFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYPAQLSGGQRQRVALARALAVEPK 156 (239)
T ss_pred EEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999887654432 334455678899999999988899999999999999999999999999
Q ss_pred EeeccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 605 VVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 605 vliLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
+|||||||+|||+.+++.++++|++++ + |+|||++||+++++..+||||++|++|++++.|++.++.
T Consensus 157 llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 225 (239)
T cd03296 157 VLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVY 225 (239)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHh
Confidence 999999999999999999999999985 3 899999999999999999999999999999999987764
No 154
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.9e-43 Score=397.51 Aligned_cols=214 Identities=32% Similarity=0.499 Sum_probs=193.2
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcceE
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 529 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 529 (1723)
++++||+|.|++..+.+.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .++.+|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~----~~~~i~ 76 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG----PGPDRG 76 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc----ccCcEE
Confidence 4689999999642212469999999999999999999999999999999999999999999999988752 357899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeecc
Q 000284 530 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 609 (1723)
Q Consensus 530 ~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 609 (1723)
|+||++.+++.+|++||+.+....++.+.+..+++++++++.+||.+..++++++||||||||++|||||+.+|+++|||
T Consensus 77 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~lllLD 156 (220)
T cd03293 77 YVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENAYPHQLSGGMRQRVALARALAVDPDVLLLD 156 (220)
T ss_pred EEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEC
Confidence 99999999999999999998776666665666778999999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEe--CCEEEEecCH
Q 000284 610 EPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMA--NGSLKCCGSS 667 (1723)
Q Consensus 610 EPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~--~G~l~~~Gs~ 667 (1723)
|||+|||+.+++.++++|+++. .|+|||++||+++++..+|||+++|+ +|+++..++.
T Consensus 157 EPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 157 EPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999884 38999999999999999999999999 7999887653
No 155
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.1e-42 Score=400.24 Aligned_cols=217 Identities=32% Similarity=0.542 Sum_probs=196.6
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHH-HHhcc
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMD-EIRKG 527 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~-~~r~~ 527 (1723)
++++||+|.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. +.. ..++.
T Consensus 1 l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~ 76 (232)
T cd03218 1 LRAENLSKRYGK----RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLG 76 (232)
T ss_pred CeEEEEEEEeCC----EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhcc
Confidence 468999999953 469999999999999999999999999999999999999999999999998753 222 24567
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEee
Q 000284 528 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVI 607 (1723)
Q Consensus 528 ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vli 607 (1723)
+||+||++.+++.+||+||+.+....++....+.+++++++++.+|+.+..++.+++||||||||++||+||+.+|++||
T Consensus 77 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~lll 156 (232)
T cd03218 77 IGYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITHLRKSKASSLSGGERRRVEIARALATNPKFLL 156 (232)
T ss_pred EEEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999999999987665565555566788999999999988999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHH
Q 000284 608 LDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 670 (1723)
Q Consensus 608 LDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~L 670 (1723)
|||||+|||+.+++.++++|++++ +|+|||++||+++++..+||||++|++|++++.|++.++
T Consensus 157 lDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 220 (232)
T cd03218 157 LDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEI 220 (232)
T ss_pred ecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHh
Confidence 999999999999999999999986 589999999999999999999999999999999987665
No 156
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.4e-42 Score=416.11 Aligned_cols=226 Identities=24% Similarity=0.391 Sum_probs=202.7
Q ss_pred ceEEEEeEEEEecCcC---------CccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCC
Q 000284 448 RCIQIRKLHKVYATKR---------GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNIT 518 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~---------~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~ 518 (1723)
..++++||++.|+.+. +...+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|+++|.++.
T Consensus 7 ~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~ 86 (331)
T PRK15079 7 VLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLL 86 (331)
T ss_pred ceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECC
Confidence 5799999999997421 1357999999999999999999999999999999999999999999999999985
Q ss_pred c----cHHHHhcceEEEccCC--CCCCCCCHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCC-cccccccCCCChhH
Q 000284 519 A----DMDEIRKGLGVCPQYD--ILFPELTVREHLEMFAVLK--GVKEELLESVVAEMVDEVGLA-DKVNIVVRALSGGM 589 (1723)
Q Consensus 519 ~----~~~~~r~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~--g~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~LSgGq 589 (1723)
. +....|+++||+||++ .+++.+||.||+.+..... +.++++.++++.++++.+||. +..++++++|||||
T Consensus 87 ~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~~~p~~LSgG~ 166 (331)
T PRK15079 87 GMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLINRYPHEFSGGQ 166 (331)
T ss_pred cCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhcCCcccCCHHH
Confidence 3 2334678899999997 6899999999998865543 466677788899999999995 46799999999999
Q ss_pred HHHHHHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCH
Q 000284 590 KRKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSS 667 (1723)
Q Consensus 590 kqrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~ 667 (1723)
|||++|||||+.+|++|||||||+|||+.++++++++|+++++ |.|||++|||++++..+||||++|.+|++++.|++
T Consensus 167 ~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~ive~g~~ 246 (331)
T PRK15079 167 CQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVELGTY 246 (331)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCH
Confidence 9999999999999999999999999999999999999999853 89999999999999999999999999999999999
Q ss_pred HHHHhh
Q 000284 668 LFLKHQ 673 (1723)
Q Consensus 668 ~~Lk~~ 673 (1723)
.++.+.
T Consensus 247 ~~i~~~ 252 (331)
T PRK15079 247 DEVYHN 252 (331)
T ss_pred HHHHcC
Confidence 887654
No 157
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-42 Score=407.11 Aligned_cols=221 Identities=27% Similarity=0.429 Sum_probs=196.8
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhc
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAAR 1432 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~~ 1432 (1723)
+|+++|++|.|++ .+.+++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.. .....+
T Consensus 4 ~l~~~~l~~~~~~-----~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 78 (274)
T PRK13647 4 IIEVEDLHFRYKD-----GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVR 78 (274)
T ss_pred eEEEEEEEEEeCC-----CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHH
Confidence 6899999999952 2459999999999999999999999999999999999999999999999999865 344567
Q ss_pred cceEEEecCCC-CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000284 1433 RLIGYCPQFDA-LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1511 (1723)
Q Consensus 1433 ~~ig~~pQ~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~ 1511 (1723)
++|||+||++. .+..+||.||+.+.....+.+..+.++++.++++.++|.+..++++.+||||||||++||+||+.+|+
T Consensus 79 ~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~~qrv~laraL~~~p~ 158 (274)
T PRK13647 79 SKVGLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPPYHLSYGQKKRVAIAGVLAMDPD 158 (274)
T ss_pred hhEEEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCChhhCCHHHHHHHHHHHHHHcCCC
Confidence 78999999962 34568999999876555566655566778899999999988999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000284 1512 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1581 (1723)
Q Consensus 1512 vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~ 1581 (1723)
+|||||||+|||+.+++.++++|+++++ +| +|||++||+++++.++||||++|++|++++.|+++.+.
T Consensus 159 llllDEPt~~LD~~~~~~l~~~l~~~~~-~g-~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 159 VIVLDEPMAYLDPRGQETLMEILDRLHN-QG-KTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred EEEEECCCcCCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 9999999999999999999999999864 44 68999999999999999999999999999999987543
No 158
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-42 Score=407.90 Aligned_cols=220 Identities=31% Similarity=0.433 Sum_probs=195.5
Q ss_pred EEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-hHH----
Q 000284 1356 YLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-PKA---- 1430 (1723)
Q Consensus 1356 ~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-~~~---- 1430 (1723)
.++|++|.|+ .+.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...
T Consensus 26 ~~~~~~~~~~------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~ 99 (269)
T cd03294 26 SKEEILKKTG------QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELREL 99 (269)
T ss_pred hhhhhhhhcC------CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhh
Confidence 4678888885 35689999999999999999999999999999999999999999999999988542 211
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000284 1431 ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1510 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p 1510 (1723)
.++++||+||++.+++.+|++||+.+.....+.......+++.++++.++|.+..++++.+|||||||||+||+||+.+|
T Consensus 100 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~lAral~~~p 179 (269)
T cd03294 100 RRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYPDELSGGMQQRVGLARALAVDP 179 (269)
T ss_pred hcCcEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCcccCCHHHHHHHHHHHHHhcCC
Confidence 24579999999999989999999988765555554445567888999999998899999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1511 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1511 ~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
++|||||||+|||+.+++.+++.|++++++.| +|||++||+++++..+|||+++|++|++++.|+++++.+
T Consensus 180 ~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 250 (269)
T cd03294 180 DILLMDEAFSALDPLIRREMQDELLRLQAELQ-KTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILT 250 (269)
T ss_pred CEEEEcCCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999864434 589999999999999999999999999999999988765
No 159
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=2.4e-42 Score=414.08 Aligned_cols=231 Identities=23% Similarity=0.337 Sum_probs=202.3
Q ss_pred cceEEEEeEEEEcCCCCc-------cCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeC
Q 000284 1352 NAIIYLRNLRKVYPGGKR-------SDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDI 1424 (1723)
Q Consensus 1352 ~~~l~v~~l~k~y~~~~~-------~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i 1424 (1723)
+++|+++||+|.|+.+.. .+...+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|+++|.++
T Consensus 6 ~~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i 85 (331)
T PRK15079 6 KVLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDL 85 (331)
T ss_pred CceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEEC
Confidence 468999999999964210 0135699999999999999999999999999999999999999999999999998
Q ss_pred CCC-h---HHhccceEEEecCC--CCCCCCCHHHHHHHHHHHc--CCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChh
Q 000284 1425 RSD-P---KAARRLIGYCPQFD--ALLEYLTVQEHLELYARIK--GVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGG 1495 (1723)
Q Consensus 1425 ~~~-~---~~~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~--g~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG 1495 (1723)
... . ...+++|||++|++ .+++.+|+.||+.+..... +.++++.++.+.++++.++|. +..++++++||||
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~~~p~~LSgG 165 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLINRYPHEFSGG 165 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhcCCcccCCHH
Confidence 652 2 23567899999997 6888999999998765443 355566677888999999995 5689999999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000284 1496 NKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1575 (1723)
Q Consensus 1496 ~kqrl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g 1575 (1723)
|||||+|||||+.+|++|||||||+|||+.+++.++++|+++.++.| .|||++|||++++..+||||++|.+|++++.|
T Consensus 166 ~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~-~til~iTHdl~~~~~~~dri~vl~~G~ive~g 244 (331)
T PRK15079 166 QCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMG-LSLIFIAHDLAVVKHISDRVLVMYLGHAVELG 244 (331)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEEc
Confidence 99999999999999999999999999999999999999999965444 68999999999999999999999999999999
Q ss_pred ChhHHHhh
Q 000284 1576 SPQHLKTR 1583 (1723)
Q Consensus 1576 ~~~~l~~~ 1583 (1723)
+++++.+.
T Consensus 245 ~~~~i~~~ 252 (331)
T PRK15079 245 TYDEVYHN 252 (331)
T ss_pred CHHHHHcC
Confidence 99888653
No 160
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=2e-42 Score=398.83 Aligned_cols=221 Identities=30% Similarity=0.480 Sum_probs=199.8
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcceE
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 529 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 529 (1723)
++++|+++.|++ +.+++|+||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|.++.......++.++
T Consensus 2 l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~ 77 (236)
T TIGR03864 2 LEVAGLSFAYGA----RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLG 77 (236)
T ss_pred EEEEeeEEEECC----EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEE
Confidence 789999999953 4699999999999999999999999999999999999999999999999987543233456899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeecc
Q 000284 530 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 609 (1723)
Q Consensus 530 ~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 609 (1723)
|+||++.+++.+|++||+.+....++.+..+.++++.++++.+||.+..++.+.+||||||||++|||||+.+|+++|||
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~laral~~~p~llllD 157 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAERADDKVRELNGGHRRRVEIARALLHRPALLLLD 157 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999998889999999988776666665556678899999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhhhC
Q 000284 610 EPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYG 675 (1723)
Q Consensus 610 EPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~g 675 (1723)
|||+|||+.+++.+++.|++++ +|+|||++||+++++.. ||||++|++|++++.|++..+.+.++
T Consensus 158 EP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~-~d~i~~l~~G~i~~~~~~~~~~~~~~ 224 (236)
T TIGR03864 158 EPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEA-DDRLVVLHRGRVLADGAAAELRGALG 224 (236)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhh-CCEEEEEeCCeEEEeCCHHHHHHHcC
Confidence 9999999999999999999985 48999999999999985 99999999999999999988876543
No 161
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.5e-42 Score=398.98 Aligned_cols=219 Identities=34% Similarity=0.558 Sum_probs=195.5
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-hHH-hc
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-PKA-AR 1432 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-~~~-~~ 1432 (1723)
++++|++|.|++ +.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|+++... ... .+
T Consensus 1 l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 74 (232)
T cd03218 1 LRAENLSKRYGK------RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRAR 74 (232)
T ss_pred CeEEEEEEEeCC------EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHh
Confidence 468999999953 4599999999999999999999999999999999999999999999999987642 222 34
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCE
Q 000284 1433 RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPI 1512 (1723)
Q Consensus 1433 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~v 1512 (1723)
+.+||+||++.+++.+|++||+.+....++....+..+.+.++++.+++.+..++++.+||||||||++||+||+.+|++
T Consensus 75 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~l 154 (232)
T cd03218 75 LGIGYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITHLRKSKASSLSGGERRRVEIARALATNPKF 154 (232)
T ss_pred ccEEEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 67999999999999999999998866555554444556778899999999889999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000284 1513 VILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1581 (1723)
Q Consensus 1513 llLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~ 1581 (1723)
|||||||+|||+.+++.+++.|+++++ +| +|||++||+++++..+|||+++|++|++++.|+++++.
T Consensus 155 lllDEPt~~LD~~~~~~~~~~l~~~~~-~~-~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 221 (232)
T cd03218 155 LLLDEPFAGVDPIAVQDIQKIIKILKD-RG-IGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIA 221 (232)
T ss_pred EEecCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhh
Confidence 999999999999999999999999863 44 58999999999999999999999999999999988764
No 162
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-42 Score=412.19 Aligned_cols=229 Identities=24% Similarity=0.382 Sum_probs=199.8
Q ss_pred CCcceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC--
Q 000284 1350 VDNAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-- 1427 (1723)
Q Consensus 1350 ~~~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-- 1427 (1723)
.+.++|+++|+++.|++... ..+.+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|+++|.++...
T Consensus 17 ~~~~~l~~~nl~~~y~~~~~-~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~ 95 (320)
T PRK13631 17 SDDIILRVKNLYCVFDEKQE-NELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKN 95 (320)
T ss_pred CCCceEEEEeEEEEeCCCCc-ccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccc
Confidence 34568999999999964210 124599999999999999999999999999999999999999999999999987532
Q ss_pred ---------------hHHhccceEEEecCC--CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCC
Q 000284 1428 ---------------PKAARRLIGYCPQFD--ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPS 1489 (1723)
Q Consensus 1428 ---------------~~~~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~-~~~~~~~ 1489 (1723)
....+++||||+|++ .+++ .|++||+.+.....+.+..+..+++.++++.++|. +..++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~ 174 (320)
T PRK13631 96 NHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDDSYLERSP 174 (320)
T ss_pred cccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCChhHhcCCc
Confidence 235678899999986 4665 59999998765445566666667788999999996 6789999
Q ss_pred CCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECC
Q 000284 1490 FTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGG 1569 (1723)
Q Consensus 1490 ~~LSgG~kqrl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G 1569 (1723)
.+|||||||||+|||||+.+|++|||||||+|||+.+++.+++.|++++ ++| +|||++|||++++..+||||++|++|
T Consensus 175 ~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~-~~g-~TiiivtHd~~~~~~~adri~vl~~G 252 (320)
T PRK13631 175 FGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAK-ANN-KTVFVITHTMEHVLEVADEVIVMDKG 252 (320)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHH-HCC-CEEEEEecCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999999999999999999999986 344 68999999999999999999999999
Q ss_pred EEEEecChhHHHh
Q 000284 1570 QLRCIGSPQHLKT 1582 (1723)
Q Consensus 1570 ~l~~~g~~~~l~~ 1582 (1723)
++++.|+++++..
T Consensus 253 ~i~~~g~~~~~~~ 265 (320)
T PRK13631 253 KILKTGTPYEIFT 265 (320)
T ss_pred EEEEeCCHHHHhc
Confidence 9999999998754
No 163
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-42 Score=400.23 Aligned_cols=222 Identities=35% Similarity=0.577 Sum_probs=198.2
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhcc
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAARR 1433 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~~~ 1433 (1723)
++++|++++|++ .+.+++++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .....++
T Consensus 1 l~~~~l~~~~~~-----~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 75 (242)
T cd03295 1 IEFENVTKRYGG-----GKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRR 75 (242)
T ss_pred CEEEEEEEEeCC-----cceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhc
Confidence 468999999963 1459999999999999999999999999999999999999999999999998864 3445577
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCcc--ccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000284 1434 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLK--HAKKPSFTLSGGNKRKLSVAIAMIGDPP 1511 (1723)
Q Consensus 1434 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~LSgG~kqrl~iA~al~~~p~ 1511 (1723)
.+||+||++.+++.+|++||+.+.....+.......+.+.++++.+++.+ ..++++.+|||||||||+|||||+.+|+
T Consensus 76 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~ 155 (242)
T cd03295 76 KIGYVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPAEFADRYPHELSGGQQQRVGVARALAADPP 155 (242)
T ss_pred ceEEEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCCC
Confidence 89999999999989999999988766655554445567889999999985 7899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1512 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1512 vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
+|||||||+|||+.+++.+++.|++++++.| +|||++||++++++.+||||++|++|++++.|+++++.+
T Consensus 156 llllDEPt~~LD~~~~~~l~~~L~~~~~~~g-~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 225 (242)
T cd03295 156 LLLMDEPFGALDPITRDQLQEEFKRLQQELG-KTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILR 225 (242)
T ss_pred EEEecCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHc
Confidence 9999999999999999999999999864334 589999999999999999999999999999999887754
No 164
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=9.6e-43 Score=395.34 Aligned_cols=211 Identities=27% Similarity=0.487 Sum_probs=192.3
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcceE
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 529 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 529 (1723)
|+++|+++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.... ..++.+|
T Consensus 1 i~~~~l~~~~~~----~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~-~~~~~i~ 75 (213)
T cd03301 1 VELENVTKRFGN----VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLP-PKDRDIA 75 (213)
T ss_pred CEEEeeEEEECC----eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCC-cccceEE
Confidence 468999999953 36999999999999999999999999999999999999999999999999875321 1246799
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeecc
Q 000284 530 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 609 (1723)
Q Consensus 530 ~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 609 (1723)
|+||++.+++.+|++||+.++....+...++.+++++++++.+|+.+..++++.+||||||||++|||||+.+|+++|||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~llllD 155 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDRKPKQLSGGQRQRVALGRAIVREPKVFLMD 155 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999999999999998766666666667778999999999998899999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEec
Q 000284 610 EPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 665 (1723)
Q Consensus 610 EPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~G 665 (1723)
|||+|||+.+++.++++|++++ .|+|||++||+++++..+||||++|++|++++.|
T Consensus 156 EPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 156 EPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 9999999999999999999985 3899999999999999999999999999998865
No 165
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.7e-42 Score=399.67 Aligned_cols=220 Identities=34% Similarity=0.534 Sum_probs=194.6
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-hHH-hc
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-PKA-AR 1432 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-~~~-~~ 1432 (1723)
|+++|+++.|++ +.+++++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... ... .+
T Consensus 1 l~~~~l~~~~~~------~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 74 (236)
T cd03219 1 LEVRGLTKRFGG------LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIAR 74 (236)
T ss_pred CeeeeeEEEECC------EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHh
Confidence 468999999952 4599999999999999999999999999999999999999999999999988653 222 35
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCC----------ChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHH
Q 000284 1433 RLIGYCPQFDALLEYLTVQEHLELYARIKGV----------AEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSV 1502 (1723)
Q Consensus 1433 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~----------~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~i 1502 (1723)
+.+||+||++.+++.+|++||+.+.....+. ...+..+.+.++++.+++.+..++++++|||||||||+|
T Consensus 75 ~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~l 154 (236)
T cd03219 75 LGIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPAGELSYGQQRRLEI 154 (236)
T ss_pred cCEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCChhhCCHHHHHHHHH
Confidence 6799999999999999999999876544322 123345577889999999988999999999999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1503 AIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1503 A~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
||||+.+|++|||||||+|||+.+++.+++.|+++++ +| +|||++||++++++.+|||+++|++|++++.|+++++.+
T Consensus 155 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (236)
T cd03219 155 ARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-RG-ITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRN 232 (236)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhcc
Confidence 9999999999999999999999999999999999864 44 589999999999999999999999999999999988753
No 166
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-42 Score=408.35 Aligned_cols=225 Identities=26% Similarity=0.445 Sum_probs=198.9
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-----Ch
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-----DP 1428 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-----~~ 1428 (1723)
+|+++|+++.|+++.. ..+.+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|+++|.++.. ..
T Consensus 1 mi~~~~v~~~y~~~~~-~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 79 (288)
T PRK13643 1 MIKFEKVNYTYQPNSP-FASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEI 79 (288)
T ss_pred CEEEEEEEEEeCCCCc-ccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccH
Confidence 4889999999964211 12359999999999999999999999999999999999999999999999999852 23
Q ss_pred HHhccceEEEecCC--CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHH
Q 000284 1429 KAARRLIGYCPQFD--ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIA 1505 (1723)
Q Consensus 1429 ~~~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~kqrl~iA~a 1505 (1723)
...++.+||++|++ .+++ .||.||+.+.....+.+..+.++++.++++.++|. +..++++.+||||||||++||+|
T Consensus 80 ~~~~~~ig~v~q~~~~~l~~-~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~LSgGqkqrvaiA~a 158 (288)
T PRK13643 80 KPVRKKVGVVFQFPESQLFE-ETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWEKSPFELSGGQMRRVAIAGI 158 (288)
T ss_pred HHHHhhEEEEecCcchhccc-chHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhccCCcccCCHHHHHHHHHHHH
Confidence 45678899999986 5665 69999999876666776666777889999999996 57899999999999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1506 MIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1506 l~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
|+.+|++|||||||+|||+.+++.+++.|+++++ +| +|||++|||++++..+||||++|++|++++.|+++++..
T Consensus 159 L~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~-~g-~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 233 (288)
T PRK13643 159 LAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ-SG-QTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQ 233 (288)
T ss_pred HHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-CC-CEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHc
Confidence 9999999999999999999999999999999864 44 589999999999999999999999999999999998754
No 167
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-42 Score=400.56 Aligned_cols=222 Identities=30% Similarity=0.482 Sum_probs=194.1
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC----hHH
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD----PKA 1430 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~----~~~ 1430 (1723)
++++||++.|++ ++.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|+++... ...
T Consensus 1 l~~~~l~~~~~~-----~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 75 (241)
T cd03256 1 IEVENLSKTYPN-----GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQ 75 (241)
T ss_pred CEEeeEEEecCC-----ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHH
Confidence 468999999963 14599999999999999999999999999999999999999999999999988642 234
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHH--------HcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHH
Q 000284 1431 ARRLIGYCPQFDALLEYLTVQEHLELYAR--------IKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSV 1502 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~--------~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~i 1502 (1723)
.++.+||+||++.+++.+|++||+.+... +.+.......+++.++++.+++.+..++++.+|||||||||+|
T Consensus 76 ~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~l 155 (241)
T cd03256 76 LRRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQRADQLSGGQQQRVAI 155 (241)
T ss_pred HHhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCCcccCCHHHHHHHHH
Confidence 57789999999999998999999976421 1122223344567889999999888899999999999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1503 AIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1503 A~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
|+||+.+|++|||||||+|||+.+++.+++.|++++++.| +|||++||++++++.+|||+++|++|++++.|+++++.+
T Consensus 156 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 234 (241)
T cd03256 156 ARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEG-ITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELTD 234 (241)
T ss_pred HHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhhH
Confidence 9999999999999999999999999999999999864444 589999999999999999999999999999999888643
No 168
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-42 Score=409.35 Aligned_cols=222 Identities=26% Similarity=0.410 Sum_probs=199.6
Q ss_pred eEEEEeEEEEecCcC-CccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-----cHH
Q 000284 449 CIQIRKLHKVYATKR-GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-----DMD 522 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~-~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-----~~~ 522 (1723)
.++++||+|.|+++. ..+.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ...
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996421 12469999999999999999999999999999999999999999999999998853 235
Q ss_pred HHhcceEEEccCC--CCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-cccccccCCCChhHHHHHHHHHHH
Q 000284 523 EIRKGLGVCPQYD--ILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA-DKVNIVVRALSGGMKRKLSLGIAL 599 (1723)
Q Consensus 523 ~~r~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~LSgGqkqrl~lA~al 599 (1723)
.+|+.||||||++ .+++ .||.||+.+.....+.+.++.++++.++++.+||. +..++.+.+||||||||++|||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~laraL 160 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSIL 160 (286)
T ss_pred HHHhheEEEecChHhccch-hhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHH
Confidence 6788999999986 4665 59999999876666777777788899999999997 678899999999999999999999
Q ss_pred hcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 600 IGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 600 ~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
+.+|++|||||||+|||+.++++++++|++++ +|+|||++||+++++..+||||++|++|++++.|++.++.
T Consensus 161 ~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 161 AMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELF 234 (286)
T ss_pred HhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999999985 4899999999999999999999999999999999987764
No 169
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-42 Score=407.81 Aligned_cols=226 Identities=26% Similarity=0.434 Sum_probs=198.9
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-----h
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-----P 1428 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-----~ 1428 (1723)
.++++||+|.|+++.. ..+.+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|+++|.++... .
T Consensus 2 ~l~~~~l~~~y~~~~~-~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 80 (286)
T PRK13646 2 TIRFDNVSYTYQKGTP-YEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYI 80 (286)
T ss_pred EEEEEEEEEEECCCCc-cccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchH
Confidence 3789999999964210 124699999999999999999999999999999999999999999999999998531 2
Q ss_pred HHhccceEEEecCC--CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHH
Q 000284 1429 KAARRLIGYCPQFD--ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIA 1505 (1723)
Q Consensus 1429 ~~~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~kqrl~iA~a 1505 (1723)
...+++||||||++ .+++ .|+.||+.+.....+.+..+..+++.++++.+||. +..++++.+||||||||++||||
T Consensus 81 ~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lara 159 (286)
T PRK13646 81 RPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSI 159 (286)
T ss_pred HHHHhheEEEecChHhccch-hhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHH
Confidence 45678899999986 4555 59999998866555666666777888999999996 67889999999999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1506 MIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1506 l~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
|+.+|++|||||||+|||+.+++.++++|++++++.| +|||++||+++++..+||||++|++|++++.|+++++.+
T Consensus 160 L~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g-~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 160 LAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDEN-KTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred HHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCC-CEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999864444 699999999999999999999999999999999988754
No 170
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-42 Score=406.49 Aligned_cols=225 Identities=28% Similarity=0.414 Sum_probs=200.5
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhc
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAAR 1432 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~~ 1432 (1723)
+|+++|+++.|++. +.+.+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|+++|.++.. .....+
T Consensus 4 ~l~~~~l~~~~~~~---~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 80 (279)
T PRK13650 4 IIEVKNLTFKYKED---QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIR 80 (279)
T ss_pred eEEEEeEEEEcCCC---CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHH
Confidence 68999999999632 12459999999999999999999999999999999999999999999999999865 344567
Q ss_pred cceEEEecCC-CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000284 1433 RLIGYCPQFD-ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1511 (1723)
Q Consensus 1433 ~~ig~~pQ~~-~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~ 1511 (1723)
+++||+||++ .++..+||+||+.+.....+.++++..+++.++++.++|.+..++++.+||||||||++||+||+.+|+
T Consensus 81 ~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~qrv~lAral~~~p~ 160 (279)
T PRK13650 81 HKIGMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREPARLSGGQKQRVAIAGAVAMRPK 160 (279)
T ss_pred hhceEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 7899999997 466778999999876655666666667788999999999988999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000284 1512 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1583 (1723)
Q Consensus 1512 vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~ 1583 (1723)
+|||||||+|||+.+++.+++.|++++++.| +|||++||++++++ .||||++|++|+++..|+++++..+
T Consensus 161 lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g-~tilivtH~~~~~~-~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 161 IIILDEATSMLDPEGRLELIKTIKGIRDDYQ-MTVISITHDLDEVA-LSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred EEEEECCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHH-hCCEEEEEECCEEEEECCHHHHHcC
Confidence 9999999999999999999999999864434 68999999999995 7999999999999999999887643
No 171
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-42 Score=400.10 Aligned_cols=219 Identities=32% Similarity=0.519 Sum_probs=198.7
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhcce
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKGL 528 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~i 528 (1723)
++++||++.|++. +.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +....++.+
T Consensus 1 l~~~~l~~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 77 (242)
T cd03295 1 IEFENVTKRYGGG---KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKI 77 (242)
T ss_pred CEEEEEEEEeCCc---ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcce
Confidence 4689999999631 459999999999999999999999999999999999999999999999998753 344567789
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCc--ccccccCCCChhHHHHHHHHHHHhcCCcEe
Q 000284 529 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLAD--KVNIVVRALSGGMKRKLSLGIALIGDSKVV 606 (1723)
Q Consensus 529 g~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~--~~~~~~~~LSgGqkqrl~lA~al~~~p~vl 606 (1723)
||+||++.+++.+||+||+.++....+.+.++.++++.++++.+|+.+ ..++++.+||||||||++|||||+.+|+++
T Consensus 78 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~ll 157 (242)
T cd03295 78 GYVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPAEFADRYPHELSGGQQQRVGVARALAADPPLL 157 (242)
T ss_pred EEEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999999999999998766666655566778899999999986 789999999999999999999999999999
Q ss_pred eccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 607 ILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 607 iLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
||||||+|||+.+++.+++.|++++ + |+|||++||+++++..+||||++|++|++++.|++..+.
T Consensus 158 llDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 224 (242)
T cd03295 158 LMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEIL 224 (242)
T ss_pred EecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 9999999999999999999999985 3 899999999999999999999999999999999887664
No 172
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-42 Score=409.66 Aligned_cols=225 Identities=24% Similarity=0.394 Sum_probs=198.3
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-------
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS------- 1426 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~------- 1426 (1723)
.|+++||++.|+++.. ....+++|+||+|++||++||+||||||||||+++|+|+++|++|+|+++|+++..
T Consensus 2 ~i~~~~l~~~y~~~~~-~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 80 (305)
T PRK13651 2 QIKVKNIVKIFNKKLP-TELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEK 80 (305)
T ss_pred EEEEEEEEEEECCCCC-ccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccc
Confidence 4889999999964211 12359999999999999999999999999999999999999999999999886521
Q ss_pred ------------------ChHHhccceEEEecCC--CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-ccc
Q 000284 1427 ------------------DPKAARRLIGYCPQFD--ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHA 1485 (1723)
Q Consensus 1427 ------------------~~~~~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~-~~~ 1485 (1723)
.....+++|||+||++ .++ ..||+||+.+.....+.+.++..+++.++++.+||. +..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~-~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~ 159 (305)
T PRK13651 81 EKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLF-EQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYL 159 (305)
T ss_pred cccccccccccccccccchHHHHHhceEEEeeCcccccc-cccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhh
Confidence 2245678899999985 444 579999998876666777777778899999999996 689
Q ss_pred CCCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEE
Q 000284 1486 KKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGI 1565 (1723)
Q Consensus 1486 ~~~~~~LSgG~kqrl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~i 1565 (1723)
++++.+|||||||||+||+||+.+|++|||||||+|||+.+++.+++.|++++ +.| +|||++|||++++..+||||++
T Consensus 160 ~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~-~~g-~tiiivtHd~~~~~~~adrv~v 237 (305)
T PRK13651 160 QRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLN-KQG-KTIILVTHDLDNVLEWTKRTIF 237 (305)
T ss_pred hCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHH-HCC-CEEEEEeeCHHHHHHhCCEEEE
Confidence 99999999999999999999999999999999999999999999999999986 444 6899999999999999999999
Q ss_pred EECCEEEEecChhHHHh
Q 000284 1566 MVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1566 m~~G~l~~~g~~~~l~~ 1582 (1723)
|++|++++.|+++++.+
T Consensus 238 l~~G~i~~~g~~~~~~~ 254 (305)
T PRK13651 238 FKDGKIIKDGDTYDILS 254 (305)
T ss_pred EECCEEEEECCHHHHhc
Confidence 99999999999988754
No 173
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-42 Score=395.24 Aligned_cols=220 Identities=26% Similarity=0.442 Sum_probs=192.6
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCCh-H--
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDP-K-- 1429 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~-~-- 1429 (1723)
++++++|++|.|+++. ..+.+++++||+|++||++||+||||||||||+++|+|+++|++|+|+++|+++.... .
T Consensus 4 ~~l~~~~l~~~~~~~~--~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~ 81 (233)
T PRK11629 4 ILLQCDNLCKRYQEGS--VQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAK 81 (233)
T ss_pred ceEEEEeEEEEcCCCC--cceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHH
Confidence 5799999999996421 1146999999999999999999999999999999999999999999999999986532 1
Q ss_pred -Hh-ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHh
Q 000284 1430 -AA-RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMI 1507 (1723)
Q Consensus 1430 -~~-~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~ 1507 (1723)
.. ++.+||+||++.+++.+|++||+.+.....+....+.++++.++++.+|+.+..++++.+||||||||++||+||+
T Consensus 82 ~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qrl~la~al~ 161 (233)
T PRK11629 82 AELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHRANHRPSELSGGERQRVAIARALV 161 (233)
T ss_pred HHHHhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHh
Confidence 12 3679999999999999999999988655555554555667889999999998889999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecC
Q 000284 1508 GDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGS 1576 (1723)
Q Consensus 1508 ~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~ 1576 (1723)
.+|++|||||||+|||+.+++.+++.|+++++++| +|||++||++++++. +||+++|++|++++.|+
T Consensus 162 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tvii~sH~~~~~~~-~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 162 NNPRLVLADEPTGNLDARNADSIFQLLGELNRLQG-TAFLVVTHDLQLAKR-MSRQLEMRDGRLTAELS 228 (233)
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCC-CEEEEEeCCHHHHHh-hCEEEEEECCEEEEEec
Confidence 99999999999999999999999999999864444 689999999999987 47999999999998775
No 174
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.9e-42 Score=400.19 Aligned_cols=218 Identities=30% Similarity=0.476 Sum_probs=197.9
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCC-----cceEEEccccCCc---c
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPT-----TGDALVFGKNITA---D 520 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~-----~G~i~i~g~~i~~---~ 520 (1723)
+++++||++.|++ ..+++|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.. .
T Consensus 1 ~l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~ 76 (247)
T TIGR00972 1 AIEIENLNLFYGE----KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKID 76 (247)
T ss_pred CEEEEEEEEEECC----eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccc
Confidence 4789999999953 35999999999999999999999999999999999999998 9999999998853 2
Q ss_pred HHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHHH
Q 000284 521 MDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKG-VKEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLSL 595 (1723)
Q Consensus 521 ~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g-~~~~~~~~~v~~~l~~~~l~----~~~~~~~~~LSgGqkqrl~l 595 (1723)
....++.+||+||++.+++ +|++||+.+.....+ .+.++.+++++++++.+||. +..++++++||||||||++|
T Consensus 77 ~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~l 155 (247)
T TIGR00972 77 VVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKDRLHDSALGLSGGQQQRLCI 155 (247)
T ss_pred hHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhhHhhCCcccCCHHHHHHHHH
Confidence 4456788999999999998 999999998766555 34455667889999999998 67889999999999999999
Q ss_pred HHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 596 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 596 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
||||+.+|+++||||||+|||+.+++.++++|+++++++|||++||+++++..+||||++|++|++++.|++.++.
T Consensus 156 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 156 ARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999999999999999999876799999999999999999999999999999999987764
No 175
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-42 Score=392.00 Aligned_cols=209 Identities=33% Similarity=0.596 Sum_probs=192.1
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcceE
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 529 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 529 (1723)
++++|+++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.. ..++.+|
T Consensus 1 l~~~~l~~~~~~----~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~---~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFGR----VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI---AARNRIG 73 (210)
T ss_pred CEEEEEEEEECC----EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH---HHHccEE
Confidence 468999999953 469999999999999999999999999999999999999999999999988753 4567899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeecc
Q 000284 530 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 609 (1723)
Q Consensus 530 ~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 609 (1723)
|+||++.+++.+|++||+.+.....+.+..+.++++.++++.+|+.+..++++.+||||||||++||+||+.+|+++|||
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~~lllD 153 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYANKRVEELSKGNQQKVQFIAAVIHDPELLILD 153 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHHhCcHhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999999999998776666666666788999999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEec
Q 000284 610 EPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 665 (1723)
Q Consensus 610 EPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~G 665 (1723)
|||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++|++|++.+.|
T Consensus 154 EP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 154 EPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 9999999999999999999985 5899999999999999999999999999998654
No 176
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.3e-42 Score=398.28 Aligned_cols=215 Identities=34% Similarity=0.496 Sum_probs=191.9
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCC-----CCCcceEEEccccCCc-c--H
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLI-----PPTTGDALVFGKNITA-D--M 521 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~-----~p~~G~i~i~g~~i~~-~--~ 521 (1723)
|+++||++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|++ +|++|+|.++|.++.. + .
T Consensus 1 i~~~~l~~~~~~----~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 76 (227)
T cd03260 1 IELRDLNVYYGD----KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDV 76 (227)
T ss_pred CEEEEEEEEcCC----ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHH
Confidence 468999999953 36999999999999999999999999999999999999 9999999999998753 2 3
Q ss_pred HHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCH-HHHHHHHHHHHHHcCCCcccccc--cCCCChhHHHHHHHHHH
Q 000284 522 DEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKE-ELLESVVAEMVDEVGLADKVNIV--VRALSGGMKRKLSLGIA 598 (1723)
Q Consensus 522 ~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~-~~~~~~v~~~l~~~~l~~~~~~~--~~~LSgGqkqrl~lA~a 598 (1723)
...++++||+||++.++ .+||+||+.+.....+... ++.++++.++++.+|+.+..+++ +.+||||||||++||||
T Consensus 77 ~~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~la~a 155 (227)
T cd03260 77 LELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLHALGLSGGQQQRLCLARA 155 (227)
T ss_pred HHHHhhEEEEecCchhc-cccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCCcccCCHHHHHHHHHHHH
Confidence 45678899999999888 7999999988766555433 33567889999999998877776 59999999999999999
Q ss_pred HhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHH
Q 000284 599 LIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLF 669 (1723)
Q Consensus 599 l~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~ 669 (1723)
|+.+|+++||||||+|||+.+++.++++|+++++.+|||++||+++++..+|||+++|++|++++.|++.+
T Consensus 156 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 156 LANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCccc
Confidence 99999999999999999999999999999998655999999999999999999999999999999988643
No 177
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-42 Score=375.51 Aligned_cols=223 Identities=30% Similarity=0.428 Sum_probs=197.6
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCCh--HH
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDP--KA 1430 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~--~~ 1430 (1723)
++++++||+..|++ ..||++|||+|++|||++|+|+||||||||+|.|+|+.+|.+|+|.++|+|+...+ +.
T Consensus 2 ~mL~v~~l~~~YG~------~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r 75 (237)
T COG0410 2 PMLEVENLSAGYGK------IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHER 75 (237)
T ss_pred CceeEEeEeecccc------eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHH
Confidence 47999999999963 67999999999999999999999999999999999999999999999999998732 45
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcC-CccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000284 1431 ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFD-LLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1509 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~-l~~~~~~~~~~LSgG~kqrl~iA~al~~~ 1509 (1723)
.|..|+||||...+|+.|||+|||.+.+..+.- +...+...++..+.|- |.+..+++.++|||||||.|+|||||+.+
T Consensus 76 ~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~-~~~~~~~~e~v~~lFP~Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 76 ARLGIAYVPEGRRIFPRLTVEENLLLGAYARRD-KEAQERDLEEVYELFPRLKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred HhCCeEeCcccccchhhCcHHHHHhhhhhcccc-cccccccHHHHHHHChhHHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 688899999999999999999999986554322 1111222556666665 67889999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000284 1510 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1583 (1723)
Q Consensus 1510 p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~ 1583 (1723)
|++|+|||||.||-|.-.++|.+.|++++++.| .||+++-++...|.+++||.++|++|+++..|+.++|.+.
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g-~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGG-MTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCC-cEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 999999999999999999999999999975444 7999999999999999999999999999999999998753
No 178
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-42 Score=406.03 Aligned_cols=219 Identities=28% Similarity=0.419 Sum_probs=198.3
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhcc
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 527 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 527 (1723)
.++++||+|.|++ .+.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|+++|.++.. ...+.++.
T Consensus 4 ~l~~~~l~~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 80 (274)
T PRK13647 4 IIEVEDLHFRYKD---GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSK 80 (274)
T ss_pred eEEEEEEEEEeCC---CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhh
Confidence 6899999999953 2359999999999999999999999999999999999999999999999998853 34556788
Q ss_pred eEEEccCCC-CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEe
Q 000284 528 LGVCPQYDI-LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVV 606 (1723)
Q Consensus 528 ig~~~Q~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vl 606 (1723)
+||+||++. .+...||.||+.+.....+.+..+.++++.++++.+||.+..++++.+||||||||++|||||+.+|++|
T Consensus 81 i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~~qrv~laraL~~~p~ll 160 (274)
T PRK13647 81 VGLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPPYHLSYGQKKRVAIAGVLAMDPDVI 160 (274)
T ss_pred EEEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCChhhCCHHHHHHHHHHHHHHcCCCEE
Confidence 999999973 3446799999998766566776667788999999999998899999999999999999999999999999
Q ss_pred eccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHH
Q 000284 607 ILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 670 (1723)
Q Consensus 607 iLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~L 670 (1723)
||||||+|||+.++++++++|++++ +|+|||++||+++++..+||||++|++|++++.|+++.+
T Consensus 161 llDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 161 VLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred EEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 9999999999999999999999985 589999999999999999999999999999999998654
No 179
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-42 Score=407.62 Aligned_cols=222 Identities=27% Similarity=0.459 Sum_probs=198.3
Q ss_pred eEEEEeEEEEecCcCC-ccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-----cHH
Q 000284 449 CIQIRKLHKVYATKRG-NCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-----DMD 522 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~-~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-----~~~ 522 (1723)
.|+++||+|.|++... .+.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ...
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 4789999999963211 2469999999999999999999999999999999999999999999999998753 234
Q ss_pred HHhcceEEEccCC--CCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-cccccccCCCChhHHHHHHHHHHH
Q 000284 523 EIRKGLGVCPQYD--ILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA-DKVNIVVRALSGGMKRKLSLGIAL 599 (1723)
Q Consensus 523 ~~r~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~LSgGqkqrl~lA~al 599 (1723)
..++.+||+||++ .++ .+||.||+.+.....+...++.+++++++++.+||. +..++++++||||||||++||+||
T Consensus 82 ~~~~~ig~v~q~~~~~~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrl~laral 160 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLF-ENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLISKSPFELSGGQMRRVAIAGVM 160 (287)
T ss_pred HHHhceEEEEeChhhhhc-cchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhhCCcccCCHHHHHHHHHHHHH
Confidence 5677899999997 355 579999998766555666667777899999999997 678999999999999999999999
Q ss_pred hcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 600 IGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 600 ~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
+.+|++|||||||+|||+.+++.++++|++++ +|+|||++||+++++..+||||++|++|+++..|++.++.
T Consensus 161 ~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 161 AYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIF 233 (287)
T ss_pred HcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999999986 5899999999999999999999999999999999987764
No 180
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-42 Score=405.52 Aligned_cols=224 Identities=28% Similarity=0.428 Sum_probs=199.9
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-hHHh
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-PKAA 1431 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-~~~~ 1431 (1723)
++|+++||++.|++. .+.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++... ....
T Consensus 4 ~~l~~~~l~~~~~~~----~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~ 79 (279)
T PRK13635 4 EIIRVEHISFRYPDA----ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDV 79 (279)
T ss_pred ceEEEEEEEEEeCCC----CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHH
Confidence 479999999999631 24599999999999999999999999999999999999999999999999998653 3456
Q ss_pred ccceEEEecCC-CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000284 1432 RRLIGYCPQFD-ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1510 (1723)
Q Consensus 1432 ~~~ig~~pQ~~-~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p 1510 (1723)
++.|||+||++ .++..+|+.||+.+.....+.+.++..+++.++++.++|.+..++++.+|||||||||+||+||+.+|
T Consensus 80 ~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~laral~~~p 159 (279)
T PRK13635 80 RRQVGMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREPHRLSGGQKQRVAIAGVLALQP 159 (279)
T ss_pred hhheEEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 77899999997 36667899999988766656666566677889999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1511 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1511 ~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
++|||||||+|||+.+++.+++.|++++++.| +|||++||++++++. |||+++|++|++++.|+++++..
T Consensus 160 ~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~-~tilivsH~~~~~~~-~d~i~~l~~G~i~~~g~~~~~~~ 229 (279)
T PRK13635 160 DIIILDEATSMLDPRGRREVLETVRQLKEQKG-ITVLSITHDLDEAAQ-ADRVIVMNKGEILEEGTPEEIFK 229 (279)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHcCC-CEEEEEecCHHHHHc-CCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999865434 689999999999985 99999999999999999988764
No 181
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-42 Score=376.69 Aligned_cols=221 Identities=30% Similarity=0.490 Sum_probs=197.9
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc--cHHHHh
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA--DMDEIR 525 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~--~~~~~r 525 (1723)
+.++++||+-.|+ ...||+|+||++++|||++|+|+||||||||++.|+|+.+|.+|+|.++|+|++. .-+..|
T Consensus 2 ~mL~v~~l~~~YG----~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r 77 (237)
T COG0410 2 PMLEVENLSAGYG----KIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERAR 77 (237)
T ss_pred CceeEEeEeeccc----ceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHh
Confidence 4689999999994 4679999999999999999999999999999999999999999999999999975 345678
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-CCcccccccCCCChhHHHHHHHHHHHhcCCc
Q 000284 526 KGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVG-LADKVNIVVRALSGGMKRKLSLGIALIGDSK 604 (1723)
Q Consensus 526 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~-l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~ 604 (1723)
..|+||||...+|+.|||+|||..++....- +...+..++++.+.+- |.+.+++++++|||||||.|+|||||+.+|+
T Consensus 78 ~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~-~~~~~~~~e~v~~lFP~Lker~~~~aG~LSGGEQQMLAiaRALm~~Pk 156 (237)
T COG0410 78 LGIAYVPEGRRIFPRLTVEENLLLGAYARRD-KEAQERDLEEVYELFPRLKERRNQRAGTLSGGEQQMLAIARALMSRPK 156 (237)
T ss_pred CCeEeCcccccchhhCcHHHHHhhhhhcccc-cccccccHHHHHHHChhHHHHhcCcccCCChHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999987654322 1112222677777774 6788899999999999999999999999999
Q ss_pred EeeccCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000284 605 VVILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 673 (1723)
Q Consensus 605 vliLDEPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~ 673 (1723)
+|+|||||.||-|.-.+++.+.|+++++ |.||+++.++.+.|..++||.++|++|+++..|+.++|.+.
T Consensus 157 lLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 157 LLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred EEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 9999999999999999999999999973 78999999999999999999999999999999999888653
No 182
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-42 Score=404.30 Aligned_cols=223 Identities=25% Similarity=0.422 Sum_probs=198.5
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhc
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAAR 1432 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~~ 1432 (1723)
+++++|++|+|++ .+.+++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|+++.. .....+
T Consensus 3 ~l~~~~l~~~~~~-----~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 77 (277)
T PRK13652 3 LIETRDLCYSYSG-----SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVR 77 (277)
T ss_pred eEEEEEEEEEeCC-----CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHH
Confidence 6899999999953 2359999999999999999999999999999999999999999999999999864 344567
Q ss_pred cceEEEecCCC-CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000284 1433 RLIGYCPQFDA-LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1511 (1723)
Q Consensus 1433 ~~ig~~pQ~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~ 1511 (1723)
+++||+||++. .+...|+.||+.+.....+.......+++.++++.++|.+..++++.+||||||||++|||||+.+|+
T Consensus 78 ~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrl~laraL~~~p~ 157 (277)
T PRK13652 78 KFVGLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRVPHHLSGGEKKRVAIAGVIAMEPQ 157 (277)
T ss_pred hheEEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 78999999963 23357999999876554566655566678899999999988999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1512 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1512 vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
+|||||||+|||+.+++.++++|++++++.| +|||++||+++++.++|||+++|++|++++.|+++++.+
T Consensus 158 llilDEPt~gLD~~~~~~l~~~l~~l~~~~g-~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 227 (277)
T PRK13652 158 VLVLDEPTAGLDPQGVKELIDFLNDLPETYG-MTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFL 227 (277)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhc
Confidence 9999999999999999999999999865434 689999999999999999999999999999999998864
No 183
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-42 Score=405.84 Aligned_cols=224 Identities=24% Similarity=0.390 Sum_probs=199.0
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC---ChH
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS---DPK 1429 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~---~~~ 1429 (1723)
++|+++|++++|++ ++.+++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|+++.. ...
T Consensus 4 ~~l~~~~l~~~~~~-----~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~ 78 (283)
T PRK13636 4 YILKVEELNYNYSD-----GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLM 78 (283)
T ss_pred ceEEEEeEEEEeCC-----CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHH
Confidence 47999999999952 2459999999999999999999999999999999999999999999999999842 234
Q ss_pred HhccceEEEecCCC-CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhc
Q 000284 1430 AARRLIGYCPQFDA-LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIG 1508 (1723)
Q Consensus 1430 ~~~~~ig~~pQ~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~ 1508 (1723)
..++.|||+||++. .+...|++||+.+.....+.+..+..+++.++++.++|.+..++++.+||||||||++|||||+.
T Consensus 79 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrl~laraL~~ 158 (283)
T PRK13636 79 KLRESVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLKDKPTHCLSFGQKKRVAIAGVLVM 158 (283)
T ss_pred HHHhhEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 56788999999963 23457999999876555566666666778899999999989999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1509 DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1509 ~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
+|++|||||||+|||+.+++.++++|++++++.| +|||++||+++++..+|||+++|++|++++.|+++++.+
T Consensus 159 ~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g-~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 159 EPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELG-LTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCC-CEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999865434 689999999999999999999999999999999988764
No 184
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-42 Score=406.23 Aligned_cols=225 Identities=27% Similarity=0.444 Sum_probs=196.9
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-----h
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-----P 1428 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-----~ 1428 (1723)
+|+++||+|.|++... ..+.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++... .
T Consensus 2 ~i~~~~l~~~~~~~~~-~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 80 (287)
T PRK13641 2 SIKFENVDYIYSPGTP-MEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNL 80 (287)
T ss_pred EEEEEEEEEEcCCCCC-ccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchH
Confidence 4789999999963210 124699999999999999999999999999999999999999999999999988531 2
Q ss_pred HHhccceEEEecCC--CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHH
Q 000284 1429 KAARRLIGYCPQFD--ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIA 1505 (1723)
Q Consensus 1429 ~~~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~kqrl~iA~a 1505 (1723)
...++.|||+||++ .++ .+|+.||+.+.....+...++..+++.++++.++|. +..++++++|||||||||+||+|
T Consensus 81 ~~~~~~ig~v~q~~~~~~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrl~lara 159 (287)
T PRK13641 81 KKLRKKVSLVFQFPEAQLF-ENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLISKSPFELSGGQMRRVAIAGV 159 (287)
T ss_pred HHHHhceEEEEeChhhhhc-cchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhhCCcccCCHHHHHHHHHHHH
Confidence 44567899999996 355 589999998765555555555667788999999997 67899999999999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1506 MIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1506 l~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
|+.+|++|||||||+|||+.+++.+++.|++++ ++| +|||++||++++++.+|||+++|++|++++.|+++++.+
T Consensus 160 l~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~-~~g-~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13641 160 MAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQ-KAG-HTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFS 234 (287)
T ss_pred HHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHH-hCC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999985 344 689999999999999999999999999999999998754
No 185
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-42 Score=395.92 Aligned_cols=218 Identities=28% Similarity=0.462 Sum_probs=193.9
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHH---H
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMD---E 523 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~---~ 523 (1723)
+.++++||+|.|+.+...+.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|+++.. +.. .
T Consensus 4 ~~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~ 83 (233)
T PRK11629 4 ILLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAE 83 (233)
T ss_pred ceEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHH
Confidence 469999999999643212469999999999999999999999999999999999999999999999998853 221 2
Q ss_pred H-hcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcC
Q 000284 524 I-RKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGD 602 (1723)
Q Consensus 524 ~-r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~ 602 (1723)
. ++.+||+||++.+++.+|++||+.+.....+.+.++.++++.++++.+||.+..++.+.+||||||||++|||||+.+
T Consensus 84 ~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qrl~la~al~~~ 163 (233)
T PRK11629 84 LRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHRANHRPSELSGGERQRVAIARALVNN 163 (233)
T ss_pred HHhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 3 367999999999999999999999876555555566677899999999999888999999999999999999999999
Q ss_pred CcEeeccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecC
Q 000284 603 SKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGS 666 (1723)
Q Consensus 603 p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs 666 (1723)
|++|||||||+|||+.+++.++++|++++ +|+|||++||++++++. +||+++|++|++++.|+
T Consensus 164 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~-~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 164 PRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKR-MSRQLEMRDGRLTAELS 228 (233)
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHh-hCEEEEEECCEEEEEec
Confidence 99999999999999999999999999984 48999999999999987 57999999999998775
No 186
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.6e-42 Score=394.96 Aligned_cols=213 Identities=31% Similarity=0.480 Sum_probs=186.9
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCCh-H----
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDP-K---- 1429 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~-~---- 1429 (1723)
|+++||++.|++++ ..+.+++++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.... .
T Consensus 1 l~~~~l~~~~~~~~--~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 78 (218)
T cd03255 1 IELKNLSKTYGGGG--EKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAA 78 (218)
T ss_pred CeEeeeEEEecCCC--cceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHH
Confidence 46899999996421 0146999999999999999999999999999999999999999999999999886422 1
Q ss_pred HhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000284 1430 AARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1509 (1723)
Q Consensus 1430 ~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~ 1509 (1723)
..++++||+||++.+++.+|++||+.+....++......++.+.++++.+++.+..++++.+|||||||||+|||||+.+
T Consensus 79 ~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 158 (218)
T cd03255 79 FRRRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRLNHYPSELSGGQQQRVAIARALAND 158 (218)
T ss_pred HHhhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhcChhhcCHHHHHHHHHHHHHccC
Confidence 13567999999999999999999999876666654444556788899999999888999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEE
Q 000284 1510 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQL 1571 (1723)
Q Consensus 1510 p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l 1571 (1723)
|++|||||||+|||+.+++.+++.|+++++++| +|||++||++++++ +|||+++|++|++
T Consensus 159 p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~-~~d~v~~l~~G~i 218 (218)
T cd03255 159 PKIILADEPTGNLDSETGKEVMELLRELNKEAG-TTIVVVTHDPELAE-YADRIIELRDGKI 218 (218)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CeEEEEECCHHHHh-hhcEEEEeeCCcC
Confidence 999999999999999999999999999864344 68999999999998 9999999999974
No 187
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=4.2e-42 Score=397.25 Aligned_cols=221 Identities=24% Similarity=0.405 Sum_probs=196.6
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC---hHH
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD---PKA 1430 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~---~~~ 1430 (1723)
+++++|++|.|++ +.+++|+||++++||++||+|+||||||||+++|+|+++|++|+|+++|.++... ...
T Consensus 1 ~l~~~~l~~~~~~------~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 74 (240)
T PRK09493 1 MIEFKNVSKHFGP------TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERL 74 (240)
T ss_pred CEEEEeEEEEECC------eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHH
Confidence 4789999999953 4599999999999999999999999999999999999999999999999998642 234
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHH-HcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000284 1431 ARRLIGYCPQFDALLEYLTVQEHLELYAR-IKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1509 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~-~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~ 1509 (1723)
.++++||+||++.+++.+|++||+.+... ..+....+..+.+.++++.+++.+..++++.+||||||||++|||||+.+
T Consensus 75 ~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~ 154 (240)
T PRK09493 75 IRQEAGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVK 154 (240)
T ss_pred HhhceEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHHhcChhhcCHHHHHHHHHHHHHhcC
Confidence 57789999999999988999999987532 23444445556788999999998888999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1510 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1510 p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
|++|||||||+|||+.+++.+++.|++++ ++| +|||++||+++++..+|||+++|++|++++.|+++++.+
T Consensus 155 p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 225 (240)
T PRK09493 155 PKLMLFDEPTSALDPELRHEVLKVMQDLA-EEG-MTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIK 225 (240)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHH-HcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhc
Confidence 99999999999999999999999999986 344 589999999999999999999999999999999887653
No 188
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-42 Score=410.83 Aligned_cols=223 Identities=26% Similarity=0.441 Sum_probs=199.9
Q ss_pred ceEEEEeEEEEecCcC-CccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-------
Q 000284 448 RCIQIRKLHKVYATKR-GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA------- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~-~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~------- 519 (1723)
..|+++||++.|+++. ..+.+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|+++|.++..
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 5799999999996431 12469999999999999999999999999999999999999999999999988743
Q ss_pred ----------cHHHHhcceEEEccCC--CCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-cccccccCCCC
Q 000284 520 ----------DMDEIRKGLGVCPQYD--ILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA-DKVNIVVRALS 586 (1723)
Q Consensus 520 ----------~~~~~r~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~LS 586 (1723)
.....|+.+|||+|++ .+|+. ||+||+.+.....+.+.++..+++.++++.+||. +..++.+.+||
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~-tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LS 178 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKD-TIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDDSYLERSPFGLS 178 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccc-hHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCChhHhcCCcccCC
Confidence 2346788999999997 46764 9999998876555667777778899999999997 57899999999
Q ss_pred hhHHHHHHHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEec
Q 000284 587 GGMKRKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 665 (1723)
Q Consensus 587 gGqkqrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~G 665 (1723)
||||||++|||||+.+|++|||||||+|||+.++++++++|++++ +|+|||++||+++++..+||||++|++|++++.|
T Consensus 179 gGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~i~~~g 258 (320)
T PRK13631 179 GGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGKILKTG 258 (320)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999885 5899999999999999999999999999999999
Q ss_pred CHHHHH
Q 000284 666 SSLFLK 671 (1723)
Q Consensus 666 s~~~Lk 671 (1723)
++.++.
T Consensus 259 ~~~~~~ 264 (320)
T PRK13631 259 TPYEIF 264 (320)
T ss_pred CHHHHh
Confidence 988764
No 189
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.8e-42 Score=397.64 Aligned_cols=218 Identities=26% Similarity=0.459 Sum_probs=197.6
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc---cHHHHhc
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA---DMDEIRK 526 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~---~~~~~r~ 526 (1723)
++++|+++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. +....++
T Consensus 2 l~~~~l~~~~~~----~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 77 (240)
T PRK09493 2 IEFKNVSKHFGP----TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQ 77 (240)
T ss_pred EEEEeEEEEECC----eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhh
Confidence 789999999953 469999999999999999999999999999999999999999999999998753 2345678
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcE
Q 000284 527 GLGVCPQYDILFPELTVREHLEMFAV-LKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 605 (1723)
Q Consensus 527 ~ig~~~Q~~~l~~~lTv~e~l~~~~~-~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 605 (1723)
.+||+||++.+++.+||+||+.+... ..+...++.++++.++++.+|+.+..++++.+||||||||++|||||+.+|++
T Consensus 78 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 157 (240)
T PRK09493 78 EAGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKL 157 (240)
T ss_pred ceEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHHhcChhhcCHHHHHHHHHHHHHhcCCCE
Confidence 89999999999999999999987542 33555566677889999999999888999999999999999999999999999
Q ss_pred eeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 606 VILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 606 liLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
+||||||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++|++|+++..|++.++.
T Consensus 158 lllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 158 MLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLI 224 (240)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHh
Confidence 99999999999999999999999986 5899999999999999999999999999999999876654
No 190
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-42 Score=399.43 Aligned_cols=219 Identities=30% Similarity=0.483 Sum_probs=194.0
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCcc----HHHHh
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITAD----MDEIR 525 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~----~~~~r 525 (1723)
++++||++.|++ ++.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ....+
T Consensus 1 l~~~~l~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 77 (241)
T cd03256 1 IEVENLSKTYPN---GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLR 77 (241)
T ss_pred CEEeeEEEecCC---ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHH
Confidence 468999999953 14699999999999999999999999999999999999999999999999987532 34567
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHH
Q 000284 526 KGLGVCPQYDILFPELTVREHLEMFAV--------LKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGI 597 (1723)
Q Consensus 526 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~--------~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~ 597 (1723)
+.+||+||++.+++.+||+||+.+... +.+...+..++++.++++.+++.+..++.+.+||||||||++||+
T Consensus 78 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~ 157 (241)
T cd03256 78 RQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQRADQLSGGQQQRVAIAR 157 (241)
T ss_pred hccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCCcccCCHHHHHHHHHHH
Confidence 889999999999999999999976432 112222344567889999999998889999999999999999999
Q ss_pred HHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 598 ALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 598 al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
||+.+|++|||||||+|||+.+++.++++|++++ .|+|||++||+++++..+|||+++|++|+++..|++.++.
T Consensus 158 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (241)
T cd03256 158 ALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELT 233 (241)
T ss_pred HHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhh
Confidence 9999999999999999999999999999999985 3899999999999999999999999999999999887663
No 191
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-42 Score=406.77 Aligned_cols=218 Identities=32% Similarity=0.466 Sum_probs=196.6
Q ss_pred EEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHH---HH-h
Q 000284 451 QIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMD---EI-R 525 (1723)
Q Consensus 451 ~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~---~~-r 525 (1723)
.++|++|.|+ .+.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +.. +. +
T Consensus 26 ~~~~~~~~~~----~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 101 (269)
T cd03294 26 SKEEILKKTG----QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRR 101 (269)
T ss_pred hhhhhhhhcC----CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhc
Confidence 5678899995 3469999999999999999999999999999999999999999999999998753 111 12 4
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcE
Q 000284 526 KGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 605 (1723)
Q Consensus 526 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 605 (1723)
+++||+||++.+++.+||.||+.+.....+....+.++++.++++.+||.+..++.+++||||||||++|||||+.+|++
T Consensus 102 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~lAral~~~p~i 181 (269)
T cd03294 102 KKISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYPDELSGGMQQRVGLARALAVDPDI 181 (269)
T ss_pred CcEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 67999999999999999999999876666665556667889999999999889999999999999999999999999999
Q ss_pred eeccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 606 VILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 606 liLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
|||||||+|||+.+++.++++|++++ + |+|||++||+++++..+|||+++|++|++++.|++.++.+
T Consensus 182 llLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 250 (269)
T cd03294 182 LLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILT 250 (269)
T ss_pred EEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999984 3 8999999999999999999999999999999999887754
No 192
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=5e-42 Score=402.66 Aligned_cols=223 Identities=25% Similarity=0.382 Sum_probs=197.0
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h---
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P--- 1428 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-~--- 1428 (1723)
.+|+++||+|.|++ +.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... .
T Consensus 6 ~~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 79 (269)
T PRK11831 6 NLVDMRGVSFTRGN------RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRL 79 (269)
T ss_pred ceEEEeCeEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhH
Confidence 47999999999953 4699999999999999999999999999999999999999999999999988542 1
Q ss_pred HHhccceEEEecCCCCCCCCCHHHHHHHHHHHc-CCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHh
Q 000284 1429 KAARRLIGYCPQFDALLEYLTVQEHLELYARIK-GVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMI 1507 (1723)
Q Consensus 1429 ~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~-g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~ 1507 (1723)
...++++||+||++.+++.+|+.||+.+..... +.+....++.+.++++.+++.+..++++.+||||||||++||+||+
T Consensus 80 ~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrv~laral~ 159 (269)
T PRK11831 80 YTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIA 159 (269)
T ss_pred HHHhhcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHh
Confidence 234677999999999999899999998754332 2333334556778899999998899999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1508 GDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1508 ~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
.+|++|||||||+|||+.+++.+++.|++++++.| +|||++|||++++..+|||+++|++|++++.|+++++.+
T Consensus 160 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 233 (269)
T PRK11831 160 LEPDLIMFDEPFVGQDPITMGVLVKLISELNSALG-VTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQA 233 (269)
T ss_pred cCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcC-cEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999864434 589999999999999999999999999999999988754
No 193
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2.6e-42 Score=390.27 Aligned_cols=207 Identities=33% Similarity=0.617 Sum_probs=188.8
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcceE
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 529 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 529 (1723)
|+++|++|.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...++.+|
T Consensus 1 l~~~~l~~~~~~----~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~-~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYGK----KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN-IEALRRIG 75 (208)
T ss_pred CEEEEEEEEECC----eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch-HHHHhhEE
Confidence 468999999953 4699999999999999999999999999999999999999999999999987543 45677899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeecc
Q 000284 530 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 609 (1723)
Q Consensus 530 ~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 609 (1723)
||||++.+++.+||+||+.++....+.+ +++++++++.+++.+..++++++|||||||||+||+||+.+|+++|||
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllD 151 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIR----KKRIDEVLDVVGLKDSAKKKVKGFSLGMKQRLGIALALLGNPDLLILD 151 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCc----HHHHHHHHHHcCCHHHHhhhHhhCCHHHHHHHHHHHHHhcCCCEEEEC
Confidence 9999999999999999998876554432 356788999999998899999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEec
Q 000284 610 EPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 665 (1723)
Q Consensus 610 EPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~G 665 (1723)
|||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++|++|++++.|
T Consensus 152 EPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 152 EPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999986 5899999999999999999999999999998754
No 194
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.8e-42 Score=395.39 Aligned_cols=215 Identities=27% Similarity=0.486 Sum_probs=190.1
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCC-----CCCceEEEEcCeeCCCC--
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEE-----YPTDGTAFIFGKDIRSD-- 1427 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~-----~p~~G~i~i~G~~i~~~-- 1427 (1723)
|+++||++.|++ +.+++|+||+|++||++||+||||||||||+++|+|++ +|++|+|.++|+++...
T Consensus 1 i~~~~l~~~~~~------~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~ 74 (227)
T cd03260 1 IELRDLNVYYGD------KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDV 74 (227)
T ss_pred CEEEEEEEEcCC------ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcch
Confidence 468999999953 46999999999999999999999999999999999999 99999999999987542
Q ss_pred -hHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChh-hHHHHHHHHHHHcCCccccCCC--CCCCChhHHHHHHHH
Q 000284 1428 -PKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEY-RMDDVVMEKLVEFDLLKHAKKP--SFTLSGGNKRKLSVA 1503 (1723)
Q Consensus 1428 -~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~-~~~~~~~~~l~~~~l~~~~~~~--~~~LSgG~kqrl~iA 1503 (1723)
....++++||+||++.++ .+|++||+.+.....+.... ..++++.++++.+++.+..+++ +.+||||||||++||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~la 153 (227)
T cd03260 75 DVLELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLHALGLSGGQQQRLCLA 153 (227)
T ss_pred HHHHHHhhEEEEecCchhc-cccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCCcccCCHHHHHHHHHH
Confidence 344577899999999888 79999999876655554332 2456778899999998776766 599999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000284 1504 IAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1579 (1723)
Q Consensus 1504 ~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~ 1579 (1723)
+||+.+|++|||||||+|||+.+++.+++.|+++++ + +|||++||+++++.++|||+++|++|++++.|++++
T Consensus 154 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~--~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 154 RALANEPEVLLLDEPTSALDPISTAKIEELIAELKK-E--YTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhh-C--cEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCccc
Confidence 999999999999999999999999999999999853 3 589999999999999999999999999999998765
No 195
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-42 Score=405.68 Aligned_cols=221 Identities=29% Similarity=0.434 Sum_probs=200.6
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhcc
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 527 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 527 (1723)
.++++||++.|++. +.+.+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. .....|++
T Consensus 4 ~l~~~~l~~~~~~~-~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (279)
T PRK13650 4 IIEVKNLTFKYKED-QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHK 82 (279)
T ss_pred eEEEEeEEEEcCCC-CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhh
Confidence 68999999999642 12459999999999999999999999999999999999999999999999999864 44567788
Q ss_pred eEEEccCC-CCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEe
Q 000284 528 LGVCPQYD-ILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVV 606 (1723)
Q Consensus 528 ig~~~Q~~-~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vl 606 (1723)
+||+||++ .+++.+||+||+.+.....|.+.++.+++++++++.+||.+..++.+.+||||||||++|||||+.+|++|
T Consensus 83 i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~qrv~lAral~~~p~lL 162 (279)
T PRK13650 83 IGMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREPARLSGGQKQRVAIAGAVAMRPKII 162 (279)
T ss_pred ceEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 99999997 36777899999998766667777777888999999999998899999999999999999999999999999
Q ss_pred eccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 607 ILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 607 iLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
||||||+|||+.+++.++++|++++ + |+|||++||+++++. .||||++|++|+++..|++.++.
T Consensus 163 lLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~-~~dri~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13650 163 ILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVA-LSDRVLVMKNGQVESTSTPRELF 228 (279)
T ss_pred EEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHH-hCCEEEEEECCEEEEECCHHHHH
Confidence 9999999999999999999999985 3 899999999999995 79999999999999999987664
No 196
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.5e-42 Score=392.23 Aligned_cols=208 Identities=26% Similarity=0.513 Sum_probs=189.7
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCcc----HHHHh
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITAD----MDEIR 525 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~----~~~~r 525 (1723)
++++|++|.|++ ++.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ....+
T Consensus 2 l~~~~l~~~~~~---~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (214)
T TIGR02673 2 IEFHNVSKAYPG---GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLR 78 (214)
T ss_pred EEEEeeeEEeCC---CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 789999999952 23699999999999999999999999999999999999999999999999988531 23467
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcE
Q 000284 526 KGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 605 (1723)
Q Consensus 526 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 605 (1723)
+.+||+||++.+++.+|+.||+.+.....+......+++++++++.+++.+..++.+.+||||||||++|||||+.+|++
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~l 158 (214)
T TIGR02673 79 RRIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFPEQLSGGEQQRVAIARAIVNSPPL 158 (214)
T ss_pred hheEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhCCCCE
Confidence 88999999999999999999999876666665556677899999999999888999999999999999999999999999
Q ss_pred eeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCE
Q 000284 606 VILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGS 660 (1723)
Q Consensus 606 liLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~ 660 (1723)
+||||||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++|++|+
T Consensus 159 llLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 159 LLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999985 58999999999999999999999999985
No 197
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=8.7e-40 Score=424.45 Aligned_cols=210 Identities=31% Similarity=0.439 Sum_probs=191.5
Q ss_pred CccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCC---cceEEEccccCCccHHHHhcceEEEccCCCCCCC
Q 000284 464 GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPT---TGDALVFGKNITADMDEIRKGLGVCPQYDILFPE 540 (1723)
Q Consensus 464 ~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~---~G~i~i~g~~i~~~~~~~r~~ig~~~Q~~~l~~~ 540 (1723)
+++.+|+|+|+++++||+++|+||||||||||+++|+|..+|+ +|+|.++|.++.. ...|+.+|||||++.+++.
T Consensus 36 ~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~--~~~~~~i~yv~Q~~~~~~~ 113 (617)
T TIGR00955 36 PRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDA--KEMRAISAYVQQDDLFIPT 113 (617)
T ss_pred CccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCH--HHHhhhceeeccccccCcc
Confidence 4567999999999999999999999999999999999999885 8999999998752 3567889999999999999
Q ss_pred CCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCCcccccccC------CCChhHHHHHHHHHHHhcCCcEeeccCC
Q 000284 541 LTVREHLEMFAVLKG---VKEELLESVVAEMVDEVGLADKVNIVVR------ALSGGMKRKLSLGIALIGDSKVVILDEP 611 (1723)
Q Consensus 541 lTv~e~l~~~~~~~g---~~~~~~~~~v~~~l~~~~l~~~~~~~~~------~LSgGqkqrl~lA~al~~~p~vliLDEP 611 (1723)
+||+|||.|.+.++. .++++.+++++++++.+||.+..|+.++ .|||||||||+||+||+.+|++++||||
T Consensus 114 lTV~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEP 193 (617)
T TIGR00955 114 LTVREHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEP 193 (617)
T ss_pred CcHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCC
Confidence 999999999887753 3456677889999999999998888886 4999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHH-HHHhhcCEEEEEeCCEEEEecCHHHHHhhhC
Q 000284 612 TSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMD-EAEELGDRIAIMANGSLKCCGSSLFLKHQYG 675 (1723)
Q Consensus 612 tsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~-e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~g 675 (1723)
|+|||+.++..+++.|++++ +|+|||+++|++. ++..++||+++|++|+++..|++.++++.+.
T Consensus 194 tsgLD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~~G~~v~~G~~~~~~~~f~ 259 (617)
T TIGR00955 194 TSGLDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMAEGRVAYLGSPDQAVPFFS 259 (617)
T ss_pred CcchhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEeeCCeEEEECCHHHHHHHHH
Confidence 99999999999999999986 4899999999995 8888999999999999999999999877653
No 198
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=2.2e-39 Score=419.97 Aligned_cols=221 Identities=28% Similarity=0.434 Sum_probs=194.9
Q ss_pred EEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCC--cceEEEccccCCccHHHHhcce
Q 000284 451 QIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPT--TGDALVFGKNITADMDEIRKGL 528 (1723)
Q Consensus 451 ~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~--~G~i~i~g~~i~~~~~~~r~~i 528 (1723)
.++|++|.|+ ++.+|+|+|+++++||++||+||||||||||+++|+|..+|+ +|+|.++|+++.. ..++++
T Consensus 70 ~~~~l~~~~~----~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLaG~~~~~~~sG~I~inG~~~~~---~~~~~i 142 (659)
T PLN03211 70 KISDETRQIQ----ERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALAGRIQGNNFTGTILANNRKPTK---QILKRT 142 (659)
T ss_pred ccccccccCC----CCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCceeEEEEECCEECch---hhccce
Confidence 4667788884 346999999999999999999999999999999999999986 9999999998742 345679
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCcccc-----cccCCCChhHHHHHHHHHHHh
Q 000284 529 GVCPQYDILFPELTVREHLEMFAVLK---GVKEELLESVVAEMVDEVGLADKVN-----IVVRALSGGMKRKLSLGIALI 600 (1723)
Q Consensus 529 g~~~Q~~~l~~~lTv~e~l~~~~~~~---g~~~~~~~~~v~~~l~~~~l~~~~~-----~~~~~LSgGqkqrl~lA~al~ 600 (1723)
|||+|++.+++.+||+||+.+.+.++ ..+.++.+++++++++.+||.+..| +.+++||||||||++||+||+
T Consensus 143 ~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~ 222 (659)
T PLN03211 143 GFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEML 222 (659)
T ss_pred EEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHH
Confidence 99999999999999999999887654 2345556678999999999987664 456789999999999999999
Q ss_pred cCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHH-HHHhhcCEEEEEeCCEEEEecCHHHHHhhhC-Cc
Q 000284 601 GDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMD-EAEELGDRIAIMANGSLKCCGSSLFLKHQYG-VG 677 (1723)
Q Consensus 601 ~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~-e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~g-~g 677 (1723)
.+|+||+|||||+|||+.+++++.++|++++ +|+|||++||+++ ++..++|+|++|++|++++.|++.++...+. .|
T Consensus 223 ~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G 302 (659)
T PLN03211 223 INPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVG 302 (659)
T ss_pred hCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCC
Confidence 9999999999999999999999999999986 5999999999998 6889999999999999999999999887653 34
Q ss_pred E
Q 000284 678 Y 678 (1723)
Q Consensus 678 y 678 (1723)
|
T Consensus 303 ~ 303 (659)
T PLN03211 303 F 303 (659)
T ss_pred C
Confidence 4
No 199
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=5.9e-42 Score=396.59 Aligned_cols=219 Identities=27% Similarity=0.417 Sum_probs=196.0
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHH-HHhc
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMD-EIRK 526 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~-~~r~ 526 (1723)
.|+++|+++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. +.. ..++
T Consensus 2 ~i~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~ 77 (242)
T TIGR03411 2 ILYLEGLSVSFDG----FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARA 77 (242)
T ss_pred eEEEEeeEEEcCC----eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhc
Confidence 5889999999953 469999999999999999999999999999999999999999999999998753 222 2456
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHHhc--------CCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHH
Q 000284 527 GLGVCPQYDILFPELTVREHLEMFAVLK--------GVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIA 598 (1723)
Q Consensus 527 ~ig~~~Q~~~l~~~lTv~e~l~~~~~~~--------g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~a 598 (1723)
.+||+||++.+++.+||+||+.++.... +...++.+++++++++.+|+.+..++.+++||||||||++||||
T Consensus 78 ~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Ge~qrv~lara 157 (242)
T TIGR03411 78 GIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLAGLLSHGQKQWLEIGML 157 (242)
T ss_pred CeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHH
Confidence 7999999999999999999998864321 12233456778999999999988899999999999999999999
Q ss_pred HhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 599 LIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 599 l~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
|+.+|++|||||||+|||+.+++.++++|+++++++|||++||+++++..+||||++|++|++++.|++.++.
T Consensus 158 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~ 230 (242)
T TIGR03411 158 LMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQ 230 (242)
T ss_pred HhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHh
Confidence 9999999999999999999999999999999987899999999999999999999999999999999887663
No 200
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-42 Score=403.62 Aligned_cols=228 Identities=26% Similarity=0.419 Sum_probs=200.4
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC--hHH
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD--PKA 1430 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~--~~~ 1430 (1723)
++|+++|++|+|++..+.+.+.+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++... ...
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 82 (280)
T PRK13633 3 EMIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWD 82 (280)
T ss_pred ceEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHH
Confidence 479999999999742211135699999999999999999999999999999999999999999999999998642 345
Q ss_pred hccceEEEecCCC--CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhc
Q 000284 1431 ARRLIGYCPQFDA--LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIG 1508 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~~--l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~ 1508 (1723)
.++++||+||++. ++ ..|+.||+.+.....+.+..+.++++.++++.+||.+..++++.+||||||||++||+||+.
T Consensus 83 ~~~~i~~v~q~~~~~~~-~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~laral~~ 161 (280)
T PRK13633 83 IRNKAGMVFQNPDNQIV-ATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAPHLLSGGQKQRVAIAGILAM 161 (280)
T ss_pred HhhheEEEecChhhhhc-cccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHc
Confidence 6788999999974 44 46999999887665566666666778899999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000284 1509 DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1583 (1723)
Q Consensus 1509 ~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~ 1583 (1723)
+|++|||||||+|||+.+++.+++.|++++++.| +|||++||++++++. |||+++|++|++++.|+++++...
T Consensus 162 ~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g-~tillvtH~~~~~~~-~d~v~~l~~G~i~~~g~~~~~~~~ 234 (280)
T PRK13633 162 RPECIIFDEPTAMLDPSGRREVVNTIKELNKKYG-ITIILITHYMEEAVE-ADRIIVMDSGKVVMEGTPKEIFKE 234 (280)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecChHHHhc-CCEEEEEECCEEEEecCHHHHhcC
Confidence 9999999999999999999999999999864444 689999999999986 999999999999999999998654
No 201
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-42 Score=389.24 Aligned_cols=211 Identities=36% Similarity=0.599 Sum_probs=190.7
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1434 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~~ 1434 (1723)
|+++|++|.|++ +.+++|+||+|++| ++||+||||||||||+++|+|+++|++|+|.++|.++.......+++
T Consensus 1 i~~~~~~~~~~~------~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 73 (211)
T cd03264 1 LQLENLTKRYGK------KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRR 73 (211)
T ss_pred CEEEEEEEEECC------EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhh
Confidence 468999999953 46999999999999 99999999999999999999999999999999999886544556788
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000284 1435 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1514 (1723)
Q Consensus 1435 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vll 1514 (1723)
++|+||++.+++.+|++||+.+.....+.+..+.++.+.++++.+++.+..++++.+||||||||++|||||+.+|++||
T Consensus 74 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~lll 153 (211)
T cd03264 74 IGYLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAKKKIGSLSGGMRRRVGIAQALVGDPSILI 153 (211)
T ss_pred eEEecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHhCchhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999999999987666665555556678889999999888899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000284 1515 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1575 (1723)
Q Consensus 1515 LDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g 1575 (1723)
|||||+|||+.+++.+++.|++++ + + +|||++||++++++.+|||+++|++|++++.|
T Consensus 154 lDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 154 VDEPTAGLDPEERIRFRNLLSELG-E-D-RIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHh-C-C-CEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999985 3 3 58999999999999999999999999998764
No 202
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-42 Score=409.72 Aligned_cols=227 Identities=24% Similarity=0.350 Sum_probs=202.9
Q ss_pred ceEEEEeEEEEecCcCC------ccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc--
Q 000284 448 RCIQIRKLHKVYATKRG------NCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~------~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-- 519 (1723)
..|+++||+|.|+.+.+ .+.||+||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++..
T Consensus 4 ~~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~ 83 (327)
T PRK11308 4 PLLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKAD 83 (327)
T ss_pred ceEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCC
Confidence 46999999999974321 3579999999999999999999999999999999999999999999999999853
Q ss_pred --cHHHHhcceEEEccCC--CCCCCCCHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHcCCCc-ccccccCCCChhHHHHH
Q 000284 520 --DMDEIRKGLGVCPQYD--ILFPELTVREHLEMFAVLK-GVKEELLESVVAEMVDEVGLAD-KVNIVVRALSGGMKRKL 593 (1723)
Q Consensus 520 --~~~~~r~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~-g~~~~~~~~~v~~~l~~~~l~~-~~~~~~~~LSgGqkqrl 593 (1723)
+....|++|||+||++ .+++.+|+.+++....... +..+++.++++.++++.+||.+ ..++++++||||||||+
T Consensus 84 ~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~p~~LSgGq~QRv 163 (327)
T PRK11308 84 PEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPEHYDRYPHMFSGGQRQRI 163 (327)
T ss_pred HHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChHHhcCCCccCCHHHHHHH
Confidence 2345678899999998 5899999999997655443 4566677788999999999974 67999999999999999
Q ss_pred HHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 594 SLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 594 ~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
+|||||+.+|++||+||||+|||+.++++++++|++++ .|.|||++|||++++..+||||++|.+|++++.|+..++.
T Consensus 164 ~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g~~~~~~ 243 (327)
T PRK11308 164 AIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTKEQIF 243 (327)
T ss_pred HHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 99999999999999999999999999999999999985 3899999999999999999999999999999999998886
Q ss_pred hhh
Q 000284 672 HQY 674 (1723)
Q Consensus 672 ~~~ 674 (1723)
+..
T Consensus 244 ~~p 246 (327)
T PRK11308 244 NNP 246 (327)
T ss_pred cCC
Confidence 543
No 203
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=4.4e-42 Score=397.92 Aligned_cols=222 Identities=28% Similarity=0.456 Sum_probs=193.1
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h---H
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P---K 1429 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-~---~ 1429 (1723)
+|+++|+++.|+. ++.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... . .
T Consensus 1 ~l~~~~l~~~~~~-----~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 75 (243)
T TIGR02315 1 MLEVENLSKVYPN-----GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLR 75 (243)
T ss_pred CeEEEeeeeecCC-----CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHH
Confidence 4789999999952 24599999999999999999999999999999999999999999999999987542 1 2
Q ss_pred HhccceEEEecCCCCCCCCCHHHHHHHHHH--------HcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHH
Q 000284 1430 AARRLIGYCPQFDALLEYLTVQEHLELYAR--------IKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLS 1501 (1723)
Q Consensus 1430 ~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~--------~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~ 1501 (1723)
..++++||+||++.+++.+|++||+.+... +.+......++++.++++.+++.+..++++.+|||||||||+
T Consensus 76 ~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~ 155 (243)
T TIGR02315 76 KLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRADQLSGGQQQRVA 155 (243)
T ss_pred HHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHH
Confidence 356789999999999999999999975321 111122233566788999999998889999999999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000284 1502 VAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1581 (1723)
Q Consensus 1502 iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~ 1581 (1723)
|||||+.+|++|||||||+|||+.+++.+++.|++++++.| +|||++||+++++.++|||+++|++|++++.|+++++.
T Consensus 156 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (243)
T TIGR02315 156 IARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDG-ITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSELD 234 (243)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHhC
Confidence 99999999999999999999999999999999999864434 68999999999999999999999999999999988763
No 204
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-41 Score=407.53 Aligned_cols=230 Identities=20% Similarity=0.355 Sum_probs=201.5
Q ss_pred ceEEEEeEEEEcCCCCc----cCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCCh
Q 000284 1353 AIIYLRNLRKVYPGGKR----SDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDP 1428 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~----~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~ 1428 (1723)
++|+++||+|.|+.... .+...+|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|+++....
T Consensus 4 ~~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~ 83 (327)
T PRK11308 4 PLLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKAD 83 (327)
T ss_pred ceEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCC
Confidence 57999999999964211 01356999999999999999999999999999999999999999999999999986532
Q ss_pred ----HHhccceEEEecCC--CCCCCCCHHHHHHHHHHHc-CCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHH
Q 000284 1429 ----KAARRLIGYCPQFD--ALLEYLTVQEHLELYARIK-GVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKL 1500 (1723)
Q Consensus 1429 ----~~~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~-g~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~kqrl 1500 (1723)
...|++|||+||++ .+.+.+|+.+++....... +..+.+.++++.++++.+||. ...++++++||||||||+
T Consensus 84 ~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~p~~LSgGq~QRv 163 (327)
T PRK11308 84 PEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPEHYDRYPHMFSGGQRQRI 163 (327)
T ss_pred HHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChHHhcCCCccCCHHHHHHH
Confidence 24567899999997 6889999999987655443 455555667889999999996 467999999999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000284 1501 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1580 (1723)
Q Consensus 1501 ~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l 1580 (1723)
+|||||+.+|++||+||||+|||+.+++.++++|++++++.| +|||++|||++++..+||||++|.+|++++.|+++++
T Consensus 164 ~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g-~til~iTHdl~~~~~~adrv~vm~~G~ive~g~~~~~ 242 (327)
T PRK11308 164 AIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELG-LSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTKEQI 242 (327)
T ss_pred HHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999999999999975445 6899999999999999999999999999999999988
Q ss_pred Hhh
Q 000284 1581 KTR 1583 (1723)
Q Consensus 1581 ~~~ 1583 (1723)
.+.
T Consensus 243 ~~~ 245 (327)
T PRK11308 243 FNN 245 (327)
T ss_pred hcC
Confidence 754
No 205
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.9e-42 Score=387.95 Aligned_cols=210 Identities=37% Similarity=0.582 Sum_probs=190.2
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1434 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~~ 1434 (1723)
++++|+++.|++ +.+++++||++++||++||+||||||||||+++|+|+++|++|+|.++|+++.. ..+++
T Consensus 1 l~~~~l~~~~~~------~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~---~~~~~ 71 (210)
T cd03269 1 LEVENVTKRFGR------VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI---AARNR 71 (210)
T ss_pred CEEEEEEEEECC------EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH---HHHcc
Confidence 468999999952 459999999999999999999999999999999999999999999999988742 35678
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000284 1435 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1514 (1723)
Q Consensus 1435 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vll 1514 (1723)
++|+||++.+++.+|++||+.+....++.+....++.+.++++.+++.+..++++.+||||||||++||+||+.+|++||
T Consensus 72 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~~ll 151 (210)
T cd03269 72 IGYLPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYANKRVEELSKGNQQKVQFIAAVIHDPELLI 151 (210)
T ss_pred EEEeccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHHhCcHhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999999999887766666555556778899999999988899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000284 1515 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1575 (1723)
Q Consensus 1515 LDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g 1575 (1723)
|||||+|||+.+++.+++.|+++++ +| +|||++||++++++.+|||+++|++|++++.|
T Consensus 152 lDEP~~~LD~~~~~~~~~~l~~~~~-~~-~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 152 LDEPFSGLDPVNVELLKDVIRELAR-AG-KTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHH-CC-CEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 9999999999999999999999864 44 58999999999999999999999999998654
No 206
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1e-41 Score=395.66 Aligned_cols=219 Identities=26% Similarity=0.464 Sum_probs=195.6
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCC-----ceEEEEcCeeCCC--
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPT-----DGTAFIFGKDIRS-- 1426 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~-----~G~i~i~G~~i~~-- 1426 (1723)
+++++|++|+|++ +.+++|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.++|+++..
T Consensus 1 ~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~ 74 (247)
T TIGR00972 1 AIEIENLNLFYGE------KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKK 74 (247)
T ss_pred CEEEEEEEEEECC------eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccc
Confidence 4789999999963 45999999999999999999999999999999999999998 9999999998864
Q ss_pred -ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCC-ChhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHHH
Q 000284 1427 -DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGV-AEYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRKL 1500 (1723)
Q Consensus 1427 -~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~kqrl 1500 (1723)
.....++.+||+||++.+++ +|++||+.+....++. +..+..+.+.++++.+++. +..++++.+||||||||+
T Consensus 75 ~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv 153 (247)
T TIGR00972 75 IDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKDRLHDSALGLSGGQQQRL 153 (247)
T ss_pred cchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhhHhhCCcccCCHHHHHHH
Confidence 23455778999999998888 9999999886655552 3344556788899999997 678899999999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000284 1501 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1580 (1723)
Q Consensus 1501 ~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l 1580 (1723)
+|||||+.+|++|||||||+|||+.+++.++++|+++++ + +|||++||+++++..+|||+++|++|++++.|+++++
T Consensus 154 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 230 (247)
T TIGR00972 154 CIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQI 230 (247)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999853 3 5899999999999999999999999999999999887
Q ss_pred Hh
Q 000284 1581 KT 1582 (1723)
Q Consensus 1581 ~~ 1582 (1723)
.+
T Consensus 231 ~~ 232 (247)
T TIGR00972 231 FT 232 (247)
T ss_pred Hh
Confidence 53
No 207
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=4.9e-42 Score=388.05 Aligned_cols=208 Identities=36% Similarity=0.552 Sum_probs=187.3
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1434 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~~ 1434 (1723)
|+++|++|+|++ +.+++++||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++... ...++.
T Consensus 1 l~~~~l~~~~~~------~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~-~~~~~~ 73 (208)
T cd03268 1 LKTNDLTKTYGK------KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN-IEALRR 73 (208)
T ss_pred CEEEEEEEEECC------eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch-HHHHhh
Confidence 468999999952 4699999999999999999999999999999999999999999999999987543 445678
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000284 1435 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1514 (1723)
Q Consensus 1435 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vll 1514 (1723)
+||+||++.+++.+|++||+.++...++.. ++++.++++.+++.+..++++.+|||||||||+||+||+.+|++||
T Consensus 74 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~lll 149 (208)
T cd03268 74 IGALIEAPGFYPNLTARENLRLLARLLGIR----KKRIDEVLDVVGLKDSAKKKVKGFSLGMKQRLGIALALLGNPDLLI 149 (208)
T ss_pred EEEecCCCccCccCcHHHHHHHHHHhcCCc----HHHHHHHHHHcCCHHHHhhhHhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999999998998999999998876654432 3457788999999988899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000284 1515 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1575 (1723)
Q Consensus 1515 LDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g 1575 (1723)
|||||+|||+.+++.+++.|+++++ +| .|||++||+++++..+|||+++|++|++++.|
T Consensus 150 lDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 150 LDEPTNGLDPDGIKELRELILSLRD-QG-ITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred ECCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999864 44 58999999999999999999999999998764
No 208
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=8.9e-42 Score=400.59 Aligned_cols=221 Identities=27% Similarity=0.459 Sum_probs=197.9
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-c---HHH
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-D---MDE 523 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~---~~~ 523 (1723)
..|+++||++.|+ ++.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. + ...
T Consensus 6 ~~l~~~~l~~~~~----~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (269)
T PRK11831 6 NLVDMRGVSFTRG----NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYT 81 (269)
T ss_pred ceEEEeCeEEEEC----CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHH
Confidence 4799999999995 3469999999999999999999999999999999999999999999999998753 1 223
Q ss_pred HhcceEEEccCCCCCCCCCHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcC
Q 000284 524 IRKGLGVCPQYDILFPELTVREHLEMFAVLK-GVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGD 602 (1723)
Q Consensus 524 ~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~-g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~ 602 (1723)
.++.+||+||++.+++.+||.||+.+..... +.+....++++.++++.+|+.+..++++++||||||||++|||||+.+
T Consensus 82 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrv~laral~~~ 161 (269)
T PRK11831 82 VRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIALE 161 (269)
T ss_pred HhhcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 5678999999999999999999998764332 344455566788999999999889999999999999999999999999
Q ss_pred CcEeeccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 603 SKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 603 p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
|++|||||||+|||+.+++.++++|++++ + |+|||++||+++++..+||||++|++|+++..|++.++.+
T Consensus 162 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 233 (269)
T PRK11831 162 PDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQA 233 (269)
T ss_pred CCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999985 3 8999999999999999999999999999999999877643
No 209
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-42 Score=403.14 Aligned_cols=222 Identities=25% Similarity=0.402 Sum_probs=199.7
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc---cHHHH
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA---DMDEI 524 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~---~~~~~ 524 (1723)
.+|+++|+++.|++ ++.+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.. .....
T Consensus 4 ~~l~~~~l~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~ 80 (283)
T PRK13636 4 YILKVEELNYNYSD---GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKL 80 (283)
T ss_pred ceEEEEeEEEEeCC---CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHH
Confidence 47999999999952 2469999999999999999999999999999999999999999999999998842 23457
Q ss_pred hcceEEEccCCC-CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCC
Q 000284 525 RKGLGVCPQYDI-LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDS 603 (1723)
Q Consensus 525 r~~ig~~~Q~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p 603 (1723)
|+.+||+||++. .+...||+||+.+.....+.+.++.+++++++++.+||.+..++++.+||||||||++|||||+.+|
T Consensus 81 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrl~laraL~~~p 160 (283)
T PRK13636 81 RESVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLKDKPTHCLSFGQKKRVAIAGVLVMEP 160 (283)
T ss_pred HhhEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 789999999973 2335799999988765556676667788999999999999999999999999999999999999999
Q ss_pred cEeeccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 604 KVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 604 ~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
++|||||||+|||+.+++.++++|++++ + |+|||++||+++++..+||||++|++|++++.|++.++..
T Consensus 161 ~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 161 KVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999985 3 8999999999999999999999999999999999877643
No 210
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=5.4e-42 Score=389.51 Aligned_cols=209 Identities=26% Similarity=0.455 Sum_probs=190.2
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCcc----HHHHh
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITAD----MDEIR 525 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~----~~~~r 525 (1723)
++++|+++.|+++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ....|
T Consensus 1 l~~~~l~~~~~~~---~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~ 77 (214)
T cd03292 1 IEFINVTKTYPNG---TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLR 77 (214)
T ss_pred CEEEEEEEEeCCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHH
Confidence 4689999999532 3699999999999999999999999999999999999999999999999988531 23467
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcE
Q 000284 526 KGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 605 (1723)
Q Consensus 526 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 605 (1723)
+.++|+||++.+++.+|++||+.++....+...++.+++++++++.+|+.+..++.+.+||||||||++|||||+.+|++
T Consensus 78 ~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~l 157 (214)
T cd03292 78 RKIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRALPAELSGGEQQRVAIARAIVNSPTI 157 (214)
T ss_pred HheEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCChhhcCHHHHHHHHHHHHHHcCCCE
Confidence 88999999999999999999999877666665666677889999999999888999999999999999999999999999
Q ss_pred eeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEE
Q 000284 606 VILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSL 661 (1723)
Q Consensus 606 liLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l 661 (1723)
+||||||+|||+.+++.+++.|++++ +|+|||++||++++++.+||++++|++|++
T Consensus 158 lllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 158 LIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999985 589999999999999999999999999974
No 211
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-42 Score=400.82 Aligned_cols=221 Identities=26% Similarity=0.393 Sum_probs=196.4
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC--hHHh
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD--PKAA 1431 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~--~~~~ 1431 (1723)
+++++|++|+|++ ++.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|+++|.++... ....
T Consensus 1 ml~~~~l~~~~~~-----~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 75 (274)
T PRK13644 1 MIRLENVSYSYPD-----GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGI 75 (274)
T ss_pred CEEEEEEEEEcCC-----CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHH
Confidence 4789999999953 24599999999999999999999999999999999999999999999999998642 3456
Q ss_pred ccceEEEecCCC-CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000284 1432 RRLIGYCPQFDA-LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1510 (1723)
Q Consensus 1432 ~~~ig~~pQ~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p 1510 (1723)
++.+||+||++. .+...|+.||+.+.....+.+..+..+.+.++++.+++.+..++++.+|||||||||+||+||+.+|
T Consensus 76 ~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~laral~~~p 155 (274)
T PRK13644 76 RKLVGIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHRSPKTLSGGQGQCVALAGILTMEP 155 (274)
T ss_pred HhheEEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCcccCCHHHHHHHHHHHHHHcCC
Confidence 778999999975 3556899999987666556666666677888999999998899999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1511 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1511 ~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
+||||||||+|||+.+++.+++.|++++ ++| +|||++||++++++ .|||+++|++|++++.|+++++..
T Consensus 156 ~lllLDEPt~gLD~~~~~~l~~~l~~l~-~~g-~til~~tH~~~~~~-~~d~v~~l~~G~i~~~g~~~~~~~ 224 (274)
T PRK13644 156 ECLIFDEVTSMLDPDSGIAVLERIKKLH-EKG-KTIVYITHNLEELH-DADRIIVMDRGKIVLEGEPENVLS 224 (274)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHH-hCC-CEEEEEecCHHHHh-hCCEEEEEECCEEEEECCHHHHhc
Confidence 9999999999999999999999999986 344 68999999999996 599999999999999999988754
No 212
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=7.2e-42 Score=390.72 Aligned_cols=218 Identities=30% Similarity=0.445 Sum_probs=191.6
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-hHH-hc
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-PKA-AR 1432 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-~~~-~~ 1432 (1723)
|+++|++|+|++ +.+++++||++++||++||+||||||||||+++|+|+++|++|+|.++|.++... ... .+
T Consensus 1 l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 74 (222)
T cd03224 1 LEVENLNAGYGK------SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERAR 74 (222)
T ss_pred CEEeeEEeecCC------eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHh
Confidence 468999999953 4699999999999999999999999999999999999999999999999988652 222 35
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHc-CCccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000284 1433 RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEF-DLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1511 (1723)
Q Consensus 1433 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~-~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~ 1511 (1723)
+++||+||++.+++.+|++||+.+.....+ ..+..+.+.++++.+ ++.+..++++.+||||||||++|||||+.+|+
T Consensus 75 ~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~ 152 (222)
T cd03224 75 AGIGYVPEGRRIFPELTVEENLLLGAYARR--RAKRKARLERVYELFPRLKERRKQLAGTLSGGEQQMLAIARALMSRPK 152 (222)
T ss_pred cCeEEeccccccCCCCcHHHHHHHHhhhcC--chhHHHHHHHHHHHHHhhhhhhhCchhhCCHHHHHHHHHHHHHhcCCC
Confidence 679999999999999999999988665443 223345566778888 57777899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1512 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1512 vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
+|||||||+|||+.+++.+++.|+++++ +| +|||++||+++++..+|||+++|++|++++.|+++++.+
T Consensus 153 llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 153 LLLLDEPSEGLAPKIVEEIFEAIRELRD-EG-VTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred EEEECCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 9999999999999999999999999864 44 689999999999999999999999999999999887653
No 213
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=6.3e-42 Score=391.19 Aligned_cols=216 Identities=30% Similarity=0.507 Sum_probs=192.6
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHH-HHhcc
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMD-EIRKG 527 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~-~~r~~ 527 (1723)
|+++||+|.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +.. ..++.
T Consensus 1 l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 76 (222)
T cd03224 1 LEVENLNAGYGK----SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAG 76 (222)
T ss_pred CEEeeEEeecCC----eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcC
Confidence 468999999953 469999999999999999999999999999999999999999999999998753 222 24678
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-CCCcccccccCCCChhHHHHHHHHHHHhcCCcEe
Q 000284 528 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEV-GLADKVNIVVRALSGGMKRKLSLGIALIGDSKVV 606 (1723)
Q Consensus 528 ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~-~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vl 606 (1723)
+||+||++.+++.+|++||+.+.....+ ..+.++++.++++.+ ++.+..++++.+||||||||++|||||+.+|+++
T Consensus 77 i~~~~q~~~~~~~~t~~~~l~~~~~~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~ll 154 (222)
T cd03224 77 IGYVPEGRRIFPELTVEENLLLGAYARR--RAKRKARLERVYELFPRLKERRKQLAGTLSGGEQQMLAIARALMSRPKLL 154 (222)
T ss_pred eEEeccccccCCCCcHHHHHHHHhhhcC--chhHHHHHHHHHHHHHhhhhhhhCchhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999999999999999988765443 233456677888888 5888889999999999999999999999999999
Q ss_pred eccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 607 ILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 607 iLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
||||||+|||+.+++.++++|++++ +|+|||++||+++++..+||||++|++|++.+.|++.++.
T Consensus 155 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 155 LLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred EECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 9999999999999999999999986 5899999999999999999999999999999999877654
No 214
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=6.7e-42 Score=388.72 Aligned_cols=210 Identities=31% Similarity=0.496 Sum_probs=187.8
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h---H
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P---K 1429 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-~---~ 1429 (1723)
+|+++|++|.|++ ++.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++... . .
T Consensus 1 ~l~~~~l~~~~~~-----~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 75 (214)
T TIGR02673 1 MIEFHNVSKAYPG-----GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLP 75 (214)
T ss_pred CEEEEeeeEEeCC-----CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHH
Confidence 4789999999952 24599999999999999999999999999999999999999999999999998642 1 2
Q ss_pred HhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000284 1430 AARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1509 (1723)
Q Consensus 1430 ~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~ 1509 (1723)
..++.+||+||++.+++.+|++||+.+.....+......++++.++++.+++.+..++++.+|||||||||+|||||+.+
T Consensus 76 ~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (214)
T TIGR02673 76 LLRRRIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFPEQLSGGEQQRVAIARAIVNS 155 (214)
T ss_pred HHHhheEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhCC
Confidence 35678999999999998899999998876655555445566788999999999888999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCE
Q 000284 1510 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQ 1570 (1723)
Q Consensus 1510 p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~ 1570 (1723)
|++|||||||+|||+.+++.+++.|+++++ +| +|||++||++++++.+|||+++|++|+
T Consensus 156 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 156 PPLLLADEPTGNLDPDLSERILDLLKRLNK-RG-TTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999853 44 589999999999999999999999985
No 215
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=9.8e-42 Score=396.70 Aligned_cols=219 Identities=28% Similarity=0.423 Sum_probs=197.6
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCcc--------
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITAD-------- 520 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~-------- 520 (1723)
.++++||++.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...
T Consensus 3 ~l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (250)
T PRK11264 3 AIEVKNLVKKFHG----QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKG 78 (250)
T ss_pred cEEEeceEEEECC----eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhh
Confidence 5899999999953 3699999999999999999999999999999999999999999999999987421
Q ss_pred -HHHHhcceEEEccCCCCCCCCCHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHH
Q 000284 521 -MDEIRKGLGVCPQYDILFPELTVREHLEMFAV-LKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIA 598 (1723)
Q Consensus 521 -~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~-~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~a 598 (1723)
....++.+||+||++.+++.+|+.||+.+... .++...++.++++.++++.+||.+..++.+++||||||||++||||
T Consensus 79 ~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~Gq~qrv~la~a 158 (250)
T PRK11264 79 LIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARA 158 (250)
T ss_pred HHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhCChhhCChHHHHHHHHHHH
Confidence 23567789999999999999999999987543 3445555566788999999999988899999999999999999999
Q ss_pred HhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 599 LIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 599 l~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
|+.+|++|||||||+|||+.+++.++++|++++ +|+|||++||+++++..+||||++|++|+++..|++.++.
T Consensus 159 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 159 LAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999986 4899999999999999999999999999999999987764
No 216
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=8.3e-42 Score=390.09 Aligned_cols=210 Identities=25% Similarity=0.430 Sum_probs=191.2
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-c---HHHHh
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-D---MDEIR 525 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~---~~~~r 525 (1723)
|+++|++|.|++ ++.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. . ....|
T Consensus 2 l~~~~l~~~~~~---~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~ 78 (222)
T PRK10908 2 IRFEHVSKAYLG---GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLR 78 (222)
T ss_pred EEEEeeEEEecC---CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHH
Confidence 789999999942 2369999999999999999999999999999999999999999999999998753 1 22357
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcE
Q 000284 526 KGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 605 (1723)
Q Consensus 526 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 605 (1723)
+.+||+||++.+++.+|++||+.+.....+.+.++.+++++++++.+++.+..++.+++||||||||++|||||+.+|++
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~l 158 (222)
T PRK10908 79 RQIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNKPAV 158 (222)
T ss_pred hheEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCchhCCHHHHHHHHHHHHHHcCCCE
Confidence 88999999999888999999999876666666666667888999999999888999999999999999999999999999
Q ss_pred eeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEE
Q 000284 606 VILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLK 662 (1723)
Q Consensus 606 liLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~ 662 (1723)
|||||||+|||+.+++.++++|++++ +++|||++||+++++..+||||++|++|+++
T Consensus 159 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~ 216 (222)
T PRK10908 159 LLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLH 216 (222)
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEc
Confidence 99999999999999999999999985 5899999999999999999999999999985
No 217
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-41 Score=396.34 Aligned_cols=214 Identities=25% Similarity=0.413 Sum_probs=191.7
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1433 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~ 1433 (1723)
+|+++|++|.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... ++
T Consensus 1 ml~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~----~~ 70 (255)
T PRK11248 1 MLQISHLYADYGG------KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP----GA 70 (255)
T ss_pred CEEEEEEEEEeCC------eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC----CC
Confidence 4789999999953 4599999999999999999999999999999999999999999999999987531 24
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000284 1434 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1513 (1723)
Q Consensus 1434 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vl 1513 (1723)
.+||+||++.+++.+|++||+.+.....+....+..+++.++++.+++.+..++++.+|||||||||+||+||+.+|++|
T Consensus 71 ~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrl~laral~~~p~ll 150 (255)
T PRK11248 71 ERGVVFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQLL 150 (255)
T ss_pred cEEEEeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 59999999999988999999987665556555555667889999999988889999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEE--CCEEEEecChh
Q 000284 1514 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMV--GGQLRCIGSPQ 1578 (1723)
Q Consensus 1514 lLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~--~G~l~~~g~~~ 1578 (1723)
||||||+|||+.+++.+++.|++++++.| +|||++|||++++..+|||+++|+ +|++++.++.+
T Consensus 151 lLDEPt~~LD~~~~~~l~~~L~~~~~~~g-~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 216 (255)
T PRK11248 151 LLDEPFGALDAFTREQMQTLLLKLWQETG-KQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPLN 216 (255)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecCC
Confidence 99999999999999999999999854444 589999999999999999999998 59999887654
No 218
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-41 Score=396.86 Aligned_cols=222 Identities=28% Similarity=0.457 Sum_probs=195.4
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhc
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAAR 1432 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~~ 1432 (1723)
+|+++|++|.|++ +.+++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.. .....+
T Consensus 2 ~l~~~~l~~~~~~------~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~ 75 (258)
T PRK13548 2 MLEARNLSVRLGG------RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELA 75 (258)
T ss_pred eEEEEeEEEEeCC------eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhh
Confidence 5899999999963 459999999999999999999999999999999999999999999999998754 334456
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHh-----
Q 000284 1433 RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMI----- 1507 (1723)
Q Consensus 1433 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~----- 1507 (1723)
+.+||+||++.+++.+|++||+.+.....+....+.++.+.++++.+++.+..++++.+|||||||||+||+||+
T Consensus 76 ~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGe~qrv~la~al~~~~~~ 155 (258)
T PRK13548 76 RRRAVLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAGRDYPQLSGGEQQRVQLARVLAQLWEP 155 (258)
T ss_pred hheEEEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHhccccc
Confidence 789999999988788999999987543333333334456788999999998899999999999999999999999
Q ss_pred -cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1508 -GDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1508 -~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
.+|++|||||||+|||+.+++.+.+.|+++++++| +|||++||+++++..+||||++|++|+++..|+++++.+
T Consensus 156 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (258)
T PRK13548 156 DGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERG-LAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVLT 230 (258)
T ss_pred CCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHhC
Confidence 59999999999999999999999999999863444 589999999999999999999999999999999887643
No 219
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-41 Score=397.09 Aligned_cols=220 Identities=28% Similarity=0.432 Sum_probs=197.8
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCC-----CcceEEEccccCCc---
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA--- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~--- 519 (1723)
+.++++|+++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++..
T Consensus 11 ~~l~~~~l~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~ 86 (258)
T PRK14268 11 PQIKVENLNLWYGE----KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDV 86 (258)
T ss_pred eeEEEeeeEEEeCC----eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccc
Confidence 57999999999953 4699999999999999999999999999999999999985 89999999998753
Q ss_pred cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHHH
Q 000284 520 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLSL 595 (1723)
Q Consensus 520 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~----~~~~~~~~~LSgGqkqrl~l 595 (1723)
+....++.+||+||++.+++ +|++||+.+.....+.+.+..+++++++++.+++. +..++++.+|||||||||+|
T Consensus 87 ~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~l 165 (258)
T PRK14268 87 DVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETSDRLKSPALSLSGGQQQRLCI 165 (258)
T ss_pred hHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchhhhhcCChhhCCHHHHHHHHH
Confidence 22346778999999999888 89999999876666666656667789999999984 45688999999999999999
Q ss_pred HHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 596 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 596 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
||||+.+|+++||||||+|||+.+++.++++|+++++++|||++||+++++..+||||++|++|++++.|++.++..
T Consensus 166 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 242 (258)
T PRK14268 166 ARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIFH 242 (258)
T ss_pred HHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998778999999999999999999999999999999999877743
No 220
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.4e-42 Score=401.79 Aligned_cols=222 Identities=28% Similarity=0.447 Sum_probs=200.4
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhc
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRK 526 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~ 526 (1723)
..++++||++.|+.. .+.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|+++.. .....++
T Consensus 4 ~~l~~~~l~~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (279)
T PRK13635 4 EIIRVEHISFRYPDA--ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRR 81 (279)
T ss_pred ceEEEEEEEEEeCCC--CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhh
Confidence 469999999999632 2469999999999999999999999999999999999999999999999999864 3345677
Q ss_pred ceEEEccCCC-CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcE
Q 000284 527 GLGVCPQYDI-LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 605 (1723)
Q Consensus 527 ~ig~~~Q~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 605 (1723)
.+||+||++. ++..+||.||+.+.....+.+.++.+++++++++.+||.+..++++.+||||||||++|||||+.+|++
T Consensus 82 ~i~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~laral~~~p~l 161 (279)
T PRK13635 82 QVGMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREPHRLSGGQKQRVAIAGVLALQPDI 161 (279)
T ss_pred heEEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 8999999973 677789999999877666666667778899999999999999999999999999999999999999999
Q ss_pred eeccCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 606 VILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 606 liLDEPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
|||||||+|||+.+++.++++|+++.+ |+|||++||+++++.. ||||++|++|++++.|++.++..
T Consensus 162 llLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~-~d~i~~l~~G~i~~~g~~~~~~~ 229 (279)
T PRK13635 162 IILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQ-ADRVIVMNKGEILEEGTPEEIFK 229 (279)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHc-CCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999999999999999863 8999999999999975 99999999999999999877643
No 221
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-41 Score=400.90 Aligned_cols=221 Identities=28% Similarity=0.453 Sum_probs=199.1
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhcc
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 527 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 527 (1723)
.++++||+|.|++. ..+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. .....++.
T Consensus 3 ~l~~~~l~~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 79 (277)
T PRK13652 3 LIETRDLCYSYSGS---KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKF 79 (277)
T ss_pred eEEEEEEEEEeCCC---CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhh
Confidence 58899999999532 359999999999999999999999999999999999999999999999998854 34566788
Q ss_pred eEEEccCCC-CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEe
Q 000284 528 LGVCPQYDI-LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVV 606 (1723)
Q Consensus 528 ig~~~Q~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vl 606 (1723)
+|||||++. .+...||.||+.+.....+.+.+..+++++++++.+||.+..++.+.+||||||||++|||||+.+|++|
T Consensus 80 i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrl~laraL~~~p~ll 159 (277)
T PRK13652 80 VGLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRVPHHLSGGEKKRVAIAGVIAMEPQVL 159 (277)
T ss_pred eEEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 999999974 2335799999987665556666667778999999999998899999999999999999999999999999
Q ss_pred eccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 607 ILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 607 iLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
||||||+|||+.+++.++++|++++ + |+|||++||+++++..+||||++|++|+++..|++.++..
T Consensus 160 ilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 227 (277)
T PRK13652 160 VLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFL 227 (277)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhc
Confidence 9999999999999999999999985 3 8999999999999999999999999999999999887753
No 222
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.5e-41 Score=395.24 Aligned_cols=221 Identities=26% Similarity=0.373 Sum_probs=196.4
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC------
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD------ 1427 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~------ 1427 (1723)
+++++||++.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...
T Consensus 3 ~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 76 (250)
T PRK11264 3 AIEVKNLVKKFHG------QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQ 76 (250)
T ss_pred cEEEeceEEEECC------eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccch
Confidence 6899999999963 4599999999999999999999999999999999999999999999999987532
Q ss_pred ---hHHhccceEEEecCCCCCCCCCHHHHHHHHHH-HcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHH
Q 000284 1428 ---PKAARRLIGYCPQFDALLEYLTVQEHLELYAR-IKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVA 1503 (1723)
Q Consensus 1428 ---~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~-~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA 1503 (1723)
....++.+||+||++.+++.+|++||+.+... .++.......+.+.++++.+++.+..++++++|||||||||+||
T Consensus 77 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~Gq~qrv~la 156 (250)
T PRK11264 77 KGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIA 156 (250)
T ss_pred hhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhCChhhCChHHHHHHHHH
Confidence 13456789999999999988999999987433 23444444556788899999998888999999999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1504 IAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1504 ~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
|||+.+|++|||||||+|||+.+++.+++.|+++++ +| +|||++||+++++..+|||+++|++|+++..|+++++.+
T Consensus 157 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 233 (250)
T PRK11264 157 RALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQ-EK-RTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALFA 233 (250)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-cC-CEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999863 44 589999999999999999999999999999999888753
No 223
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.5e-42 Score=400.96 Aligned_cols=219 Identities=28% Similarity=0.382 Sum_probs=197.6
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc--cHHHHhc
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA--DMDEIRK 526 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~--~~~~~r~ 526 (1723)
+++++||+|.|++ .+.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|.++.. .....++
T Consensus 1 ml~~~~l~~~~~~---~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 77 (274)
T PRK13644 1 MIRLENVSYSYPD---GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRK 77 (274)
T ss_pred CEEEEEEEEEcCC---CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHh
Confidence 3789999999953 2359999999999999999999999999999999999999999999999998853 2345678
Q ss_pred ceEEEccCCC-CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcE
Q 000284 527 GLGVCPQYDI-LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 605 (1723)
Q Consensus 527 ~ig~~~Q~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 605 (1723)
.+|||||++. .+..+|+.||+.+.....+.+..+.+++++++++.+||.+..++++.+||||||||++||+||+.+|++
T Consensus 78 ~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~laral~~~p~l 157 (274)
T PRK13644 78 LVGIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHRSPKTLSGGQGQCVALAGILTMEPEC 157 (274)
T ss_pred heEEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 8999999975 356689999998876666677777778899999999999999999999999999999999999999999
Q ss_pred eeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 606 VILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 606 liLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
|||||||+|||+.+++.++++|++++ +|+|||++||+++++. .||||++|++|++++.|++.++.
T Consensus 158 llLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~-~~d~v~~l~~G~i~~~g~~~~~~ 223 (274)
T PRK13644 158 LIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELH-DADRIIVMDRGKIVLEGEPENVL 223 (274)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHh-hCCEEEEEECCEEEEECCHHHHh
Confidence 99999999999999999999999986 5899999999999996 59999999999999999987764
No 224
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-41 Score=399.71 Aligned_cols=224 Identities=27% Similarity=0.428 Sum_probs=198.0
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHh
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAA 1431 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~ 1431 (1723)
++++++|++|.|+++ ++.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .....
T Consensus 6 ~~l~~~nl~~~~~~~----~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~ 81 (271)
T PRK13632 6 VMIKVENVSFSYPNS----ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEI 81 (271)
T ss_pred eEEEEEeEEEEcCCC----CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHH
Confidence 579999999999631 3469999999999999999999999999999999999999999999999999864 33456
Q ss_pred ccceEEEecCCC-CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000284 1432 RRLIGYCPQFDA-LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1510 (1723)
Q Consensus 1432 ~~~ig~~pQ~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p 1510 (1723)
++++||+||++. .++.+|++||+.+.....+....+.++.+.++++.++|.+..++++.+||||||||++|||||+.+|
T Consensus 82 ~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 161 (271)
T PRK13632 82 RKKIGIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDKEPQNLSGGQKQRVAIASVLALNP 161 (271)
T ss_pred hcceEEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 788999999974 5667899999987655545555555667888999999998899999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1511 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1511 ~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
++|||||||+|||+.+++.+++.|++++++ +++|||++||++++++ .|||+++|++|++++.|+++++..
T Consensus 162 ~lllLDEP~~gLD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~-~~d~v~~l~~G~i~~~g~~~~~~~ 231 (271)
T PRK13632 162 EIIIFDESTSMLDPKGKREIKKIMVDLRKT-RKKTLISITHDMDEAI-LADKVIVFSEGKLIAQGKPKEILN 231 (271)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEEechhHHh-hCCEEEEEECCEEEEecCHHHHhc
Confidence 999999999999999999999999998643 3368999999999997 799999999999999999887653
No 225
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=6.1e-42 Score=396.78 Aligned_cols=218 Identities=28% Similarity=0.463 Sum_probs=192.8
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc----cHHHHh
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA----DMDEIR 525 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~----~~~~~r 525 (1723)
++++||++.|+. ++.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +....|
T Consensus 2 l~~~~l~~~~~~---~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (243)
T TIGR02315 2 LEVENLSKVYPN---GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLR 78 (243)
T ss_pred eEEEeeeeecCC---CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHH
Confidence 789999999951 2469999999999999999999999999999999999999999999999998753 123457
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHH
Q 000284 526 KGLGVCPQYDILFPELTVREHLEMFAV--------LKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGI 597 (1723)
Q Consensus 526 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~--------~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~ 597 (1723)
+.+||+||++.+++.+||+||+.+... +.+....+.++++.++++.+|+.+..++++.+||||||||++|||
T Consensus 79 ~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~ 158 (243)
T TIGR02315 79 RRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRADQLSGGQQQRVAIAR 158 (243)
T ss_pred hheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHH
Confidence 889999999999999999999976321 112222344567899999999998889999999999999999999
Q ss_pred HHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHH
Q 000284 598 ALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 670 (1723)
Q Consensus 598 al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~L 670 (1723)
||+.+|++|||||||+|||+.+++.++++|++++ + |+|||++||+++++..+||++++|++|++++.|++.++
T Consensus 159 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 159 ALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSEL 233 (243)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHh
Confidence 9999999999999999999999999999999984 3 89999999999999999999999999999999988665
No 226
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.5e-41 Score=387.96 Aligned_cols=213 Identities=28% Similarity=0.429 Sum_probs=189.6
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h---H
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P---K 1429 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-~---~ 1429 (1723)
+|+++|++|.|++ .+.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... . .
T Consensus 1 ~l~~~~l~~~~~~-----~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~ 75 (222)
T PRK10908 1 MIRFEHVSKAYLG-----GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVP 75 (222)
T ss_pred CEEEEeeEEEecC-----CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHH
Confidence 4789999999942 24599999999999999999999999999999999999999999999999988542 1 2
Q ss_pred HhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000284 1430 AARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1509 (1723)
Q Consensus 1430 ~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~ 1509 (1723)
..++.+||+||++.+++.+|++||+.+.....+....+..+.+.++++.+++.+..++++.+||||||||++|||||+.+
T Consensus 76 ~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~ 155 (222)
T PRK10908 76 FLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNK 155 (222)
T ss_pred HHHhheEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCchhCCHHHHHHHHHHHHHHcC
Confidence 35678999999998888899999998876666655555556778899999998888999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEE
Q 000284 1510 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRC 1573 (1723)
Q Consensus 1510 p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~ 1573 (1723)
|++|||||||+|||+.+++.+++.|+++++ ++ +|||++||++++++.+|||+++|++|+++.
T Consensus 156 p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 156 PAVLLADEPTGNLDDALSEGILRLFEEFNR-VG-VTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 999999999999999999999999999853 44 589999999999999999999999999853
No 227
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-41 Score=399.06 Aligned_cols=221 Identities=24% Similarity=0.390 Sum_probs=195.2
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC---ChHH
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS---DPKA 1430 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~---~~~~ 1430 (1723)
||+++||+|+|++ +.+++++||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++.. ....
T Consensus 1 ml~~~~l~~~~~~------~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 74 (271)
T PRK13638 1 MLATSDLWFRYQD------EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLA 74 (271)
T ss_pred CeEEEEEEEEcCC------cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHH
Confidence 4789999999953 459999999999999999999999999999999999999999999999999842 2234
Q ss_pred hccceEEEecCCCC-CCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000284 1431 ARRLIGYCPQFDAL-LEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1509 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~~l-~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~ 1509 (1723)
.+++|||+||++.+ +...|+.||+.+.....+....+..+.+.++++.+++.+..++++.+||||||||++||+||+.+
T Consensus 75 ~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~laraL~~~ 154 (271)
T PRK13638 75 LRQQVATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRHQPIQCLSHGQKKRVAIAGALVLQ 154 (271)
T ss_pred HHhheEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHhcCCchhCCHHHHHHHHHHHHHHcC
Confidence 56789999999753 34468999998766555655555556778899999999888999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1510 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1510 p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
|++|||||||+|||+.+++.+++.|+++++ +| +|||++|||++++..+|||+++|++|++++.|+++++.+
T Consensus 155 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g-~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 225 (271)
T PRK13638 155 ARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-QG-NHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFA 225 (271)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999863 44 589999999999999999999999999999999988754
No 228
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.8e-41 Score=392.51 Aligned_cols=219 Identities=29% Similarity=0.418 Sum_probs=193.7
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-hH-Hh
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-PK-AA 1431 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-~~-~~ 1431 (1723)
+|+++|++|.|++ +.+++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++... .. ..
T Consensus 2 ~i~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~ 75 (242)
T TIGR03411 2 ILYLEGLSVSFDG------FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIA 75 (242)
T ss_pred eEEEEeeEEEcCC------eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHH
Confidence 6899999999953 4699999999999999999999999999999999999999999999999987542 22 23
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHc--------CCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHH
Q 000284 1432 RRLIGYCPQFDALLEYLTVQEHLELYARIK--------GVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVA 1503 (1723)
Q Consensus 1432 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~--------g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA 1503 (1723)
++.+||+||++.+++.+|++||+.+..... +......++++.++++.+++.+..++++++||||||||++||
T Consensus 76 ~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Ge~qrv~la 155 (242)
T TIGR03411 76 RAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLAGLLSHGQKQWLEIG 155 (242)
T ss_pred hcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHH
Confidence 567999999999999999999998754311 112233456788899999999888999999999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000284 1504 IAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1581 (1723)
Q Consensus 1504 ~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~ 1581 (1723)
|||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++.++|||+++|++|++++.|+++++.
T Consensus 156 ral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~ 230 (242)
T TIGR03411 156 MLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLA-G-K-HSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQ 230 (242)
T ss_pred HHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHh-c-C-CEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHh
Confidence 99999999999999999999999999999999985 3 4 58999999999999999999999999999999988874
No 229
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=9.2e-42 Score=386.73 Aligned_cols=208 Identities=32% Similarity=0.537 Sum_probs=183.6
Q ss_pred EEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhccce
Q 000284 1357 LRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAARRLI 1435 (1723)
Q Consensus 1357 v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~~~~i 1435 (1723)
++|++|.|++. .+.+++++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .....+++|
T Consensus 2 ~~~l~~~~~~~----~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 77 (211)
T cd03225 2 LKNLSFSYPDG----ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKV 77 (211)
T ss_pred ceeEEEecCCC----CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhc
Confidence 68999999631 2469999999999999999999999999999999999999999999999998864 334567789
Q ss_pred EEEecCCC-CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000284 1436 GYCPQFDA-LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1514 (1723)
Q Consensus 1436 g~~pQ~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vll 1514 (1723)
||+||++. .++.+|++||+.+.....+......++.+.++++.+++.+..++++.+|||||||||+|||||+.+|++||
T Consensus 78 ~~~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~lll 157 (211)
T cd03225 78 GLVFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRDRSPFTLSGGQKQRVAIAGVLAMDPDILL 157 (211)
T ss_pred eEEecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999974 35678999999876555554444455678889999999888899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCE
Q 000284 1515 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQ 1570 (1723)
Q Consensus 1515 LDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~ 1570 (1723)
|||||+|||+.+++.+++.|+++++ +| +|||++||++++++.+|||+++|++|+
T Consensus 158 lDEPt~~LD~~~~~~~~~~l~~~~~-~~-~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 158 LDEPTAGLDPAGRRELLELLKKLKA-EG-KTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 9999999999999999999999864 34 689999999999999999999999985
No 230
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-41 Score=393.57 Aligned_cols=219 Identities=29% Similarity=0.503 Sum_probs=197.4
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-c-HHHHhc
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-D-MDEIRK 526 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~-~~~~r~ 526 (1723)
.++++||+|.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. + ....|+
T Consensus 3 ~l~~~~l~~~~~~----~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (241)
T PRK10895 3 TLTAKNLAKAYKG----RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARR 78 (241)
T ss_pred eEEEeCcEEEeCC----EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHh
Confidence 5899999999953 469999999999999999999999999999999999999999999999998753 2 233567
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcE
Q 000284 527 GLGVCPQYDILFPELTVREHLEMFAVLK-GVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 605 (1723)
Q Consensus 527 ~ig~~~Q~~~l~~~lTv~e~l~~~~~~~-g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 605 (1723)
.+||+||++.+++.+||.||+.+..... +.+.++.+++++++++.+|+.+..++++++||||||||++|||||+.+|++
T Consensus 79 ~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~l 158 (241)
T PRK10895 79 GIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKF 158 (241)
T ss_pred CeEEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHHHhhcchhhCCHHHHHHHHHHHHHhcCCCE
Confidence 8999999999999999999998765443 344455667889999999999888999999999999999999999999999
Q ss_pred eeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 606 VILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 606 liLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
|||||||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++|++|++++.|++.++.
T Consensus 159 lllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 225 (241)
T PRK10895 159 ILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEIL 225 (241)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHh
Confidence 99999999999999999999999986 5899999999999999999999999999999999987653
No 231
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=5.5e-42 Score=386.68 Aligned_cols=203 Identities=31% Similarity=0.462 Sum_probs=180.8
Q ss_pred EEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcceEE
Q 000284 451 QIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLGV 530 (1723)
Q Consensus 451 ~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig~ 530 (1723)
+++||+|.|++. +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ...++++||
T Consensus 1 ~~~~l~~~~~~~---~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~--~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKKG---TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA--KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCCc---CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh--HHhhcceEE
Confidence 368999999531 469999999999999999999999999999999999999999999999998753 345678999
Q ss_pred EccCCC-CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeecc
Q 000284 531 CPQYDI-LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 609 (1723)
Q Consensus 531 ~~Q~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 609 (1723)
+||++. .+..+|++||+.++....+. .++++.++++.+||.+..++++++||||||||++|||||+.+|+++|||
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~----~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllD 151 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDA----GNEQAETVLKDLDLYALKERHPLSLSGGQKQRLAIAAALLSGKDLLIFD 151 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCc----cHHHHHHHHHHcCCchhcCCCchhCCHHHHHHHHHHHHHHhCCCEEEEe
Confidence 999974 23467999999886544331 1357889999999999899999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEE
Q 000284 610 EPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLK 662 (1723)
Q Consensus 610 EPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~ 662 (1723)
|||+|||+.+++.++++|++++ +|+|||++||++++++.+|||+++|++|+++
T Consensus 152 EPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 152 EPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999984 6899999999999999999999999999874
No 232
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-41 Score=393.22 Aligned_cols=221 Identities=33% Similarity=0.533 Sum_probs=196.4
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h-HHh
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P-KAA 1431 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-~-~~~ 1431 (1723)
+++++|++|+|++ +.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++... . ...
T Consensus 3 ~l~~~~l~~~~~~------~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 76 (241)
T PRK10895 3 TLTAKNLAKAYKG------RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARA 76 (241)
T ss_pred eEEEeCcEEEeCC------EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHH
Confidence 6899999999953 4699999999999999999999999999999999999999999999999998642 2 234
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHc-CCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000284 1432 RRLIGYCPQFDALLEYLTVQEHLELYARIK-GVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1510 (1723)
Q Consensus 1432 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~-g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p 1510 (1723)
++.+||+||++.+++.+|+.||+.+..... +....+.++.+.++++.+++.+..++++++|||||||||+||+||+.+|
T Consensus 77 ~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p 156 (241)
T PRK10895 77 RRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANP 156 (241)
T ss_pred HhCeEEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHHHhhcchhhCCHHHHHHHHHHHHHhcCC
Confidence 678999999999998899999998765443 2333345567888999999988889999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1511 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1511 ~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
++|||||||+|||+.+++.+++.|++++ ++| .|||++||+++++..+|||+++|++|++++.|+++++..
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~-~~g-~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 157 KFILLDEPFAGVDPISVIDIKRIIEHLR-DSG-LGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHH-hcC-CEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 9999999999999999999999999986 344 589999999999999999999999999999999887643
No 233
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-41 Score=406.77 Aligned_cols=228 Identities=19% Similarity=0.328 Sum_probs=199.9
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCC----CCcceEEEccccCCc-c---
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP----PTTGDALVFGKNITA-D--- 520 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~----p~~G~i~i~g~~i~~-~--- 520 (1723)
.++++||++.|+.+.+...||+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.. .
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 58999999999764333579999999999999999999999999999999999998 489999999999853 2
Q ss_pred HHHHh-cceEEEccCC--CCCCCCCHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHcCCCc---ccccccCCCChhHHHHH
Q 000284 521 MDEIR-KGLGVCPQYD--ILFPELTVREHLEMFAVLK-GVKEELLESVVAEMVDEVGLAD---KVNIVVRALSGGMKRKL 593 (1723)
Q Consensus 521 ~~~~r-~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~-g~~~~~~~~~v~~~l~~~~l~~---~~~~~~~~LSgGqkqrl 593 (1723)
..+.| +.|||+||++ .+++.+|+.+++....... +...++.++++.++++.+||.+ ..++++++|||||||||
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~p~~LSgGq~QRv 162 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRV 162 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhCCchhCCHHHHHHH
Confidence 22222 4799999998 5889999999987655433 5566677788999999999974 46889999999999999
Q ss_pred HHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 594 SLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 594 ~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
+|||||+.+|++|||||||+|||+.++++++++|++++ .|.|+|++|||++++..+||||++|.+|++++.|++.++.
T Consensus 163 ~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~g~~~~~~ 242 (326)
T PRK11022 163 MIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGKAHDIF 242 (326)
T ss_pred HHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 99999999999999999999999999999999999985 3899999999999999999999999999999999998886
Q ss_pred hhhCC
Q 000284 672 HQYGV 676 (1723)
Q Consensus 672 ~~~g~ 676 (1723)
+....
T Consensus 243 ~~p~h 247 (326)
T PRK11022 243 RAPRH 247 (326)
T ss_pred hCCCC
Confidence 54433
No 234
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=7.5e-42 Score=387.44 Aligned_cols=208 Identities=34% Similarity=0.546 Sum_probs=186.2
Q ss_pred EEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhcceE
Q 000284 451 QIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKGLG 529 (1723)
Q Consensus 451 ~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ig 529 (1723)
+++||+|.|++. .+.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +....++.+|
T Consensus 1 ~~~~l~~~~~~~--~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (211)
T cd03225 1 ELKNLSFSYPDG--ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVG 78 (211)
T ss_pred CceeEEEecCCC--CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhce
Confidence 368999999541 1469999999999999999999999999999999999999999999999998753 3455678899
Q ss_pred EEccCCC-CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeec
Q 000284 530 VCPQYDI-LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVIL 608 (1723)
Q Consensus 530 ~~~Q~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliL 608 (1723)
|+||++. .++.+|++||+.+.....+....+.+++++++++.+||.+..++++++||||||||++|||||+.+|+++||
T Consensus 79 ~~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~llll 158 (211)
T cd03225 79 LVFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRDRSPFTLSGGQKQRVAIAGVLAMDPDILLL 158 (211)
T ss_pred EEecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999974 356789999998876555555555667889999999999888999999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCE
Q 000284 609 DEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGS 660 (1723)
Q Consensus 609 DEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~ 660 (1723)
||||+|||+.+++.+++.|++++ +|+|||++||+++++..+||||++|++|+
T Consensus 159 DEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 159 DEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999986 48999999999999999999999999985
No 235
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-41 Score=405.53 Aligned_cols=227 Identities=21% Similarity=0.293 Sum_probs=197.1
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC----CCceEEEEcCeeCCCC-h
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY----PTDGTAFIFGKDIRSD-P 1428 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~----p~~G~i~i~G~~i~~~-~ 1428 (1723)
+|+++||++.|+... +...||+||||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|+++... .
T Consensus 3 ~L~v~~l~~~~~~~~--~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~ 80 (326)
T PRK11022 3 LLNVDKLSVHFGDES--APFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE 80 (326)
T ss_pred eEEEeCeEEEECCCC--ccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCH
Confidence 689999999997421 22469999999999999999999999999999999999997 4899999999998652 2
Q ss_pred HH----hccceEEEecCC--CCCCCCCHHHHHHHHHHHc-CCChhhHHHHHHHHHHHcCCcc---ccCCCCCCCChhHHH
Q 000284 1429 KA----ARRLIGYCPQFD--ALLEYLTVQEHLELYARIK-GVAEYRMDDVVMEKLVEFDLLK---HAKKPSFTLSGGNKR 1498 (1723)
Q Consensus 1429 ~~----~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~-g~~~~~~~~~~~~~l~~~~l~~---~~~~~~~~LSgG~kq 1498 (1723)
+. .++.|||+||++ .+.+.+|+.+++....... +...++.++++.++++.+||.+ ..++++++|||||||
T Consensus 81 ~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~p~~LSgGq~Q 160 (326)
T PRK11022 81 KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ 160 (326)
T ss_pred HHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhCCchhCCHHHHH
Confidence 22 224799999997 5888999998886654433 4555556678899999999964 468999999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChh
Q 000284 1499 KLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQ 1578 (1723)
Q Consensus 1499 rl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~ 1578 (1723)
||+|||||+.+|+|||+||||+|||+.+++.++++|++++++.| .|||++|||++++..+||||++|.+|++++.|+++
T Consensus 161 Rv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g-~til~iTHdl~~~~~~adri~vm~~G~ive~g~~~ 239 (326)
T PRK11022 161 RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKEN-MALVLITHDLALVAEAAHKIIVMYAGQVVETGKAH 239 (326)
T ss_pred HHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999999999999975445 68999999999999999999999999999999999
Q ss_pred HHHhh
Q 000284 1579 HLKTR 1583 (1723)
Q Consensus 1579 ~l~~~ 1583 (1723)
++.+.
T Consensus 240 ~~~~~ 244 (326)
T PRK11022 240 DIFRA 244 (326)
T ss_pred HHhhC
Confidence 98754
No 236
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.3e-41 Score=388.44 Aligned_cols=212 Identities=27% Similarity=0.490 Sum_probs=188.1
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cH---HHHh
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DM---DEIR 525 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~---~~~r 525 (1723)
++++||++.|+++.+.+.+++++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +. ...|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 6899999999643223569999999999999999999999999999999999999999999999998753 21 1233
Q ss_pred -cceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCc
Q 000284 526 -KGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSK 604 (1723)
Q Consensus 526 -~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~ 604 (1723)
+.+||+||++.+++.+|++||+.+.....+.+..+.++++.++++.+|+.+..++.+++||||||||++|||||+.+|+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~ 161 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRINHRPSELSGGERQRVAIARALVNQPS 161 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhCCCC
Confidence 6799999999999999999999886555555555556778899999999988899999999999999999999999999
Q ss_pred EeeccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEE
Q 000284 605 VVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLK 662 (1723)
Q Consensus 605 vliLDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~ 662 (1723)
+|||||||+|||+.+++.++++|++++ .|+|||++||++++++. ||||++|++|+++
T Consensus 162 illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~-~d~v~~l~~G~i~ 220 (221)
T TIGR02211 162 LVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKK-LDRVLEMKDGQLF 220 (221)
T ss_pred EEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhh-cCEEEEEeCCEec
Confidence 999999999999999999999999985 38999999999999976 8999999999974
No 237
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.8e-41 Score=387.19 Aligned_cols=215 Identities=25% Similarity=0.440 Sum_probs=186.8
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-hH---
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-PK--- 1429 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-~~--- 1429 (1723)
+|+++|+++.|+++. +.+.+++++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... ..
T Consensus 1 ~l~~~~v~~~~~~~~--~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (221)
T TIGR02211 1 LLKCENLGKRYQEGK--LDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERA 78 (221)
T ss_pred CEEEEeeeEEccCCC--cceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHH
Confidence 378999999996421 124699999999999999999999999999999999999999999999999988542 21
Q ss_pred Hhc-cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhc
Q 000284 1430 AAR-RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIG 1508 (1723)
Q Consensus 1430 ~~~-~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~ 1508 (1723)
..+ +.+||+||++.+++.+|++||+.+....++....+..+++.++++.+++.+..++++.+||||||||++|||||+.
T Consensus 79 ~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~ 158 (221)
T TIGR02211 79 KLRNKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRINHRPSELSGGERQRVAIARALVN 158 (221)
T ss_pred HHHHhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhC
Confidence 123 6799999999999889999999876554444444445677889999999988899999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEE
Q 000284 1509 DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLR 1572 (1723)
Q Consensus 1509 ~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~ 1572 (1723)
+|++|||||||+|||+.+++.+++.|++++++.| +|||++||++++++. |||+++|++|+++
T Consensus 159 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~tH~~~~~~~-~d~v~~l~~G~i~ 220 (221)
T TIGR02211 159 QPSLVLADEPTGNLDNNNAKIIFDLMLELNRELN-TSFLVVTHDLELAKK-LDRVLEMKDGQLF 220 (221)
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHhh-cCEEEEEeCCEec
Confidence 9999999999999999999999999999864434 589999999999975 8999999999975
No 238
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.9e-41 Score=394.07 Aligned_cols=220 Identities=23% Similarity=0.394 Sum_probs=197.8
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc--------
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-------- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-------- 519 (1723)
..++++||++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++..
T Consensus 4 ~~l~~~~l~~~~~~----~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (257)
T PRK10619 4 NKLNVIDLHKRYGE----HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQL 79 (257)
T ss_pred ccEEEeeeEEEECC----EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccccc
Confidence 35899999999953 469999999999999999999999999999999999999999999999988742
Q ss_pred ------cHHHHhcceEEEccCCCCCCCCCHHHHHHHHH-HhcCCCHHHHHHHHHHHHHHcCCCccc-ccccCCCChhHHH
Q 000284 520 ------DMDEIRKGLGVCPQYDILFPELTVREHLEMFA-VLKGVKEELLESVVAEMVDEVGLADKV-NIVVRALSGGMKR 591 (1723)
Q Consensus 520 ------~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~-~~~g~~~~~~~~~v~~~l~~~~l~~~~-~~~~~~LSgGqkq 591 (1723)
+....++.+||+||++.+++.+|++||+.+.. ...+....+.++++.++++.+|+.+.. ++.+.+|||||||
T Consensus 80 ~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~G~~q 159 (257)
T PRK10619 80 KVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQ 159 (257)
T ss_pred ccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHH
Confidence 13456788999999999999999999998743 334455556677899999999998764 8889999999999
Q ss_pred HHHHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHH
Q 000284 592 KLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 670 (1723)
Q Consensus 592 rl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~L 670 (1723)
|++|||||+.+|+++||||||+|||+.+++.++++|++++ +|+|||++||+++++..+||||++|++|+++..|++.++
T Consensus 160 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 239 (257)
T PRK10619 160 RVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGAPEQL 239 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHh
Confidence 9999999999999999999999999999999999999986 489999999999999999999999999999999988766
Q ss_pred H
Q 000284 671 K 671 (1723)
Q Consensus 671 k 671 (1723)
.
T Consensus 240 ~ 240 (257)
T PRK10619 240 F 240 (257)
T ss_pred h
Confidence 4
No 239
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-41 Score=399.09 Aligned_cols=225 Identities=25% Similarity=0.423 Sum_probs=199.6
Q ss_pred cceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCc---eEEEEcCeeCCC-C
Q 000284 1352 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTD---GTAFIFGKDIRS-D 1427 (1723)
Q Consensus 1352 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~---G~i~i~G~~i~~-~ 1427 (1723)
+.+|+++|++|.|++. .+.+++++||+|++||++||+||||||||||+++|+|+++|++ |+|.++|.++.. .
T Consensus 3 ~~~l~i~~l~~~~~~~----~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~ 78 (282)
T PRK13640 3 DNIVEFKHVSFTYPDS----KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKT 78 (282)
T ss_pred CceEEEEEEEEEcCCC----CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCC
Confidence 3579999999999632 2459999999999999999999999999999999999999998 899999999865 3
Q ss_pred hHHhccceEEEecCCC-CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHH
Q 000284 1428 PKAARRLIGYCPQFDA-LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAM 1506 (1723)
Q Consensus 1428 ~~~~~~~ig~~pQ~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al 1506 (1723)
....+++|||+||++. +++..|++||+.+.....+.+.++..+++.++++.++|.+..++++++||||||||++||+||
T Consensus 79 ~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LS~G~~qrv~laral 158 (282)
T PRK13640 79 VWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEPANLSGGQKQRVAIAGIL 158 (282)
T ss_pred HHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCcccCCHHHHHHHHHHHHH
Confidence 3456778999999974 566789999998765556666666667788999999999999999999999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1507 IGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1507 ~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
+.+|++|||||||+|||+.+++.+++.|++++++.| +|||++||++++++ .|||+++|++|++++.|+++++..
T Consensus 159 ~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g-~tvli~tH~~~~~~-~~d~i~~l~~G~i~~~g~~~~~~~ 232 (282)
T PRK13640 159 AVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNN-LTVISITHDIDEAN-MADQVLVLDDGKLLAQGSPVEIFS 232 (282)
T ss_pred HcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHH-hCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999864434 68999999999996 799999999999999999988754
No 240
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-41 Score=399.07 Aligned_cols=219 Identities=23% Similarity=0.340 Sum_probs=196.3
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc---cHHHHh
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA---DMDEIR 525 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~---~~~~~r 525 (1723)
+++++||++.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .....|
T Consensus 1 ml~~~~l~~~~~~----~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 76 (271)
T PRK13638 1 MLATSDLWFRYQD----EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALR 76 (271)
T ss_pred CeEEEEEEEEcCC----cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHH
Confidence 3789999999953 459999999999999999999999999999999999999999999999998742 234567
Q ss_pred cceEEEccCCCC-CCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCc
Q 000284 526 KGLGVCPQYDIL-FPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSK 604 (1723)
Q Consensus 526 ~~ig~~~Q~~~l-~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~ 604 (1723)
+.+||+||++.+ +...|+.||+.+.....+....+..++++++++.+|+.+..++++.+||||||||++||+||+.+|+
T Consensus 77 ~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~laraL~~~p~ 156 (271)
T PRK13638 77 QQVATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRHQPIQCLSHGQKKRVAIAGALVLQAR 156 (271)
T ss_pred hheEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHhcCCchhCCHHHHHHHHHHHHHHcCCC
Confidence 889999999753 3456899999887666666666666788999999999988899999999999999999999999999
Q ss_pred EeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 605 VVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 605 vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
+|||||||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++|++|++++.|++.++.
T Consensus 157 lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 224 (271)
T PRK13638 157 YLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVF 224 (271)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999985 5899999999999999999999999999999999987664
No 241
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-41 Score=391.70 Aligned_cols=218 Identities=25% Similarity=0.412 Sum_probs=196.6
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCC-------ccH
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNIT-------ADM 521 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~-------~~~ 521 (1723)
.++++|+++.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++. ...
T Consensus 2 ~l~~~~l~~~~~~----~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (242)
T PRK11124 2 SIQLNGINCFYGA----HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAI 77 (242)
T ss_pred EEEEEeeEEEECC----eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhH
Confidence 4789999999953 46999999999999999999999999999999999999999999999999863 123
Q ss_pred HHHhcceEEEccCCCCCCCCCHHHHHHH-HHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHh
Q 000284 522 DEIRKGLGVCPQYDILFPELTVREHLEM-FAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALI 600 (1723)
Q Consensus 522 ~~~r~~ig~~~Q~~~l~~~lTv~e~l~~-~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~ 600 (1723)
...|+.+||+||++.+++.+|+.||+.+ .....+...++..+++.++++.+|+.+..++.+.+||||||||++|||||+
T Consensus 78 ~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~laral~ 157 (242)
T PRK11124 78 RELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYADRFPLHLSGGQQQRVAIARALM 157 (242)
T ss_pred HHHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHh
Confidence 4567889999999999999999999975 334455555556678899999999998889999999999999999999999
Q ss_pred cCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHH
Q 000284 601 GDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 670 (1723)
Q Consensus 601 ~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~L 670 (1723)
.+|+++||||||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++|++|+++..|++.++
T Consensus 158 ~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 158 MEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCF 228 (242)
T ss_pred cCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHh
Confidence 9999999999999999999999999999986 489999999999999999999999999999999987654
No 242
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-41 Score=397.22 Aligned_cols=222 Identities=27% Similarity=0.480 Sum_probs=194.7
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC---ChHH
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS---DPKA 1430 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~---~~~~ 1430 (1723)
+|+++|++++|++ .+.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++.. ....
T Consensus 1 ~l~~~~l~~~~~~-----~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 75 (275)
T PRK13639 1 ILETRDLKYSYPD-----GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLE 75 (275)
T ss_pred CEEEEEEEEEeCC-----CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHH
Confidence 4789999999963 2459999999999999999999999999999999999999999999999999852 2234
Q ss_pred hccceEEEecCCC-CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000284 1431 ARRLIGYCPQFDA-LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1509 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~ 1509 (1723)
.++.|||+||++. .+..+|+.||+.+.....+....+..+++.++++.++|.+..++++++||||||||++|||||+.+
T Consensus 76 ~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LS~Gq~qrv~laral~~~ 155 (275)
T PRK13639 76 VRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFENKPPHHLSGGQKKRVAIAGILAMK 155 (275)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 5778999999963 333479999998654333444445556788899999999899999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1510 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1510 p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
|++|||||||+|||+.+++.+++.|+++++ +| +|||++||+++++..+|||+++|++|++++.|+++++..
T Consensus 156 p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~-~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (275)
T PRK13639 156 PEIIVLDEPTSGLDPMGASQIMKLLYDLNK-EG-ITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFS 226 (275)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CC-CEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999864 44 689999999999999999999999999999999998754
No 243
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-41 Score=400.16 Aligned_cols=224 Identities=27% Similarity=0.403 Sum_probs=200.9
Q ss_pred ceEEEEeEEEEecCcC--CccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc--cHHH
Q 000284 448 RCIQIRKLHKVYATKR--GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA--DMDE 523 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~--~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~--~~~~ 523 (1723)
..++++||+|.|++.. +.+.+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. ....
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 82 (280)
T PRK13633 3 EMIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWD 82 (280)
T ss_pred ceEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHH
Confidence 4699999999997432 13469999999999999999999999999999999999999999999999998854 2345
Q ss_pred HhcceEEEccCCC--CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhc
Q 000284 524 IRKGLGVCPQYDI--LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIG 601 (1723)
Q Consensus 524 ~r~~ig~~~Q~~~--l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~ 601 (1723)
.++.+|||||++. ++ ..||.||+.+.....+.+..+.+++++++++.+||.+..++++.+||||||||++||+||+.
T Consensus 83 ~~~~i~~v~q~~~~~~~-~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~laral~~ 161 (280)
T PRK13633 83 IRNKAGMVFQNPDNQIV-ATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAPHLLSGGQKQRVAIAGILAM 161 (280)
T ss_pred HhhheEEEecChhhhhc-cccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHc
Confidence 6788999999974 44 46999999987766676667777889999999999999999999999999999999999999
Q ss_pred CCcEeeccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000284 602 DSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 673 (1723)
Q Consensus 602 ~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~ 673 (1723)
+|+++||||||+|||+.+++.++++|++++ .|+|||++||+++++.. |||+++|++|++.+.|++.++...
T Consensus 162 ~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~-~d~v~~l~~G~i~~~g~~~~~~~~ 234 (280)
T PRK13633 162 RPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVE-ADRIIVMDSGKVVMEGTPKEIFKE 234 (280)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhc-CCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999999984 38999999999999986 999999999999999999887543
No 244
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=3.2e-41 Score=386.88 Aligned_cols=218 Identities=25% Similarity=0.409 Sum_probs=189.8
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-hHH-
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-PKA- 1430 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-~~~- 1430 (1723)
++|+++|++++|+++. ....+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++... ...
T Consensus 5 ~~l~~~~l~~~~~~~~--~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~ 82 (228)
T PRK10584 5 NIVEVHHLKKSVGQGE--HELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEAR 82 (228)
T ss_pred ceEEEeeeEEEccCCC--cceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHH
Confidence 5799999999996421 013589999999999999999999999999999999999999999999999988642 221
Q ss_pred --h-ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHh
Q 000284 1431 --A-RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMI 1507 (1723)
Q Consensus 1431 --~-~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~ 1507 (1723)
. ++.+||+||++.+++.+|+.||+.+....++.+..+.++++.++++.+++.+..++++.+||||||||++||+||+
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Ge~qrl~la~al~ 162 (228)
T PRK10584 83 AKLRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARAFN 162 (228)
T ss_pred HHHHhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCChhhCCHHHHHHHHHHHHHh
Confidence 2 3579999999999999999999987655555544455677889999999998889999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEe
Q 000284 1508 GDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCI 1574 (1723)
Q Consensus 1508 ~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~ 1574 (1723)
.+|++|||||||+|||+.+++.+++.|++++++.| +|||++|||+++++. |||+++|++|++++.
T Consensus 163 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~~-~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 163 GRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHG-TTLILVTHDLQLAAR-CDRRLRLVNGQLQEE 227 (228)
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHh-CCEEEEEECCEEEec
Confidence 99999999999999999999999999999864434 589999999999865 999999999998753
No 245
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-41 Score=393.75 Aligned_cols=219 Identities=28% Similarity=0.422 Sum_probs=195.3
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCC-----CCcceEEEccccCCc---
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA--- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~--- 519 (1723)
+.|+++||++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+.+ |++|+|.++|+++..
T Consensus 5 ~~l~~~~l~~~~~~----~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~ 80 (253)
T PRK14242 5 PKMEARGLSFFYGD----FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHV 80 (253)
T ss_pred cEEEEeeeEEEECC----eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEcccccc
Confidence 57999999999953 469999999999999999999999999999999999974 689999999998853
Q ss_pred cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCCc----ccccccCCCChhHHHHHH
Q 000284 520 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGLAD----KVNIVVRALSGGMKRKLS 594 (1723)
Q Consensus 520 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~v~~~l~~~~l~~----~~~~~~~~LSgGqkqrl~ 594 (1723)
+....|+.+||+||++.+|+ .||+||+.+.....+. ..+..+++++++++.+|+.+ ..++.+.+|||||||||+
T Consensus 81 ~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~ 159 (253)
T PRK14242 81 DVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKDRLHESALGLSGGQQQRLC 159 (253)
T ss_pred CHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHHH
Confidence 23456788999999998888 5999999887655554 23445678889999999853 468889999999999999
Q ss_pred HHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 595 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 595 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
|||||+.+|++|||||||+|||+.+++.++++|+++++++|||++||+++++..+||||++|++|++++.|++.++.
T Consensus 160 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 160 IARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999977899999999999999999999999999999999987764
No 246
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-41 Score=394.40 Aligned_cols=211 Identities=26% Similarity=0.430 Sum_probs=191.7
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcce
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGL 528 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~i 528 (1723)
+++++||++.|++ +.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .+..+
T Consensus 1 ml~~~~l~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~----~~~~~ 72 (255)
T PRK11248 1 MLQISHLYADYGG----KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEG----PGAER 72 (255)
T ss_pred CEEEEEEEEEeCC----eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCC----CCCcE
Confidence 3789999999953 469999999999999999999999999999999999999999999999998753 13458
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeec
Q 000284 529 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVIL 608 (1723)
Q Consensus 529 g~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliL 608 (1723)
||+||++.+++.+||.||+.+.....+....+.++++.++++.+||.+..++++.+||||||||++||+||+.+|++|||
T Consensus 73 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrl~laral~~~p~lllL 152 (255)
T PRK11248 73 GVVFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQLLLL 152 (255)
T ss_pred EEEeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999999998876666666666677899999999999888999999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHH-h-CCcEEEEEcCCHHHHHhhcCEEEEEe--CCEEEEecCH
Q 000284 609 DEPTSGMDPYSMRLTWQLIKKI-K-KGRIILLTTHSMDEAEELGDRIAIMA--NGSLKCCGSS 667 (1723)
Q Consensus 609 DEPtsgLD~~~r~~l~~~l~~~-~-~~~tiil~TH~~~e~~~l~dri~il~--~G~l~~~Gs~ 667 (1723)
||||+|||+.+++.++++|+++ + +|+|||++||+++++..+||||++|+ +|++++.++.
T Consensus 153 DEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 153 DEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred eCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 9999999999999999999997 3 48999999999999999999999999 5999887764
No 247
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.3e-41 Score=386.15 Aligned_cols=208 Identities=31% Similarity=0.567 Sum_probs=188.8
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc---cHHHHhc
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA---DMDEIRK 526 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~---~~~~~r~ 526 (1723)
++++||++.|++ +.+++++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +....++
T Consensus 1 l~~~~l~~~~~~----~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 76 (213)
T cd03262 1 IEIKNLHKSFGD----FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQ 76 (213)
T ss_pred CEEEEEEEEECC----eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHh
Confidence 468999999953 469999999999999999999999999999999999999999999999998742 3345678
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcE
Q 000284 527 GLGVCPQYDILFPELTVREHLEMFAV-LKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 605 (1723)
Q Consensus 527 ~ig~~~Q~~~l~~~lTv~e~l~~~~~-~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 605 (1723)
.+||+||++.+++.+|+.||+.++.. .++.+.++.++++.++++.+|+.+..++++.+||||||||++||+||+.+|++
T Consensus 77 ~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 156 (213)
T cd03262 77 KVGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMNPKV 156 (213)
T ss_pred cceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhhCccccCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999999988643 34555556667889999999999888999999999999999999999999999
Q ss_pred eeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEE
Q 000284 606 VILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSL 661 (1723)
Q Consensus 606 liLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l 661 (1723)
+||||||+|||+.+++.++++|++++ +|+|||++||+++++..+||||++|++|++
T Consensus 157 lllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 157 MLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred EEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999986 489999999999999999999999999974
No 248
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=3.7e-41 Score=393.17 Aligned_cols=222 Identities=22% Similarity=0.398 Sum_probs=196.0
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC------
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS------ 1426 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~------ 1426 (1723)
..|+++||++.|++ +.+++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++..
T Consensus 4 ~~l~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~ 77 (257)
T PRK10619 4 NKLNVIDLHKRYGE------HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDG 77 (257)
T ss_pred ccEEEeeeEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccc
Confidence 35899999999953 469999999999999999999999999999999999999999999999998742
Q ss_pred --------ChHHhccceEEEecCCCCCCCCCHHHHHHHHH-HHcCCChhhHHHHHHHHHHHcCCccc-cCCCCCCCChhH
Q 000284 1427 --------DPKAARRLIGYCPQFDALLEYLTVQEHLELYA-RIKGVAEYRMDDVVMEKLVEFDLLKH-AKKPSFTLSGGN 1496 (1723)
Q Consensus 1427 --------~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~-~~~g~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~LSgG~ 1496 (1723)
.....++++||+||++.+++.+|++||+.+.. ...+......++++.++++.+|+.+. .++++.+|||||
T Consensus 78 ~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~G~ 157 (257)
T PRK10619 78 QLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQ 157 (257)
T ss_pred ccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHH
Confidence 12345678999999999999999999997643 23344444556678889999999876 488999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecC
Q 000284 1497 KRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGS 1576 (1723)
Q Consensus 1497 kqrl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~ 1576 (1723)
|||++|||||+.+|++|||||||+|||+.+++.+++.|+++++ .| +|||++|||++++..+||||++|++|+++..|+
T Consensus 158 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~g-~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 235 (257)
T PRK10619 158 QQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE-EG-KTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGA 235 (257)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cC-CEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999999863 44 689999999999999999999999999999999
Q ss_pred hhHHHh
Q 000284 1577 PQHLKT 1582 (1723)
Q Consensus 1577 ~~~l~~ 1582 (1723)
++++.+
T Consensus 236 ~~~~~~ 241 (257)
T PRK10619 236 PEQLFG 241 (257)
T ss_pred HHHhhh
Confidence 887753
No 249
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.8e-41 Score=385.26 Aligned_cols=210 Identities=30% Similarity=0.442 Sum_probs=187.7
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h---HH
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P---KA 1430 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-~---~~ 1430 (1723)
++++|+++.|++ .+.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++... . ..
T Consensus 1 l~~~~l~~~~~~-----~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~ 75 (214)
T cd03292 1 IEFINVTKTYPN-----GTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPY 75 (214)
T ss_pred CEEEEEEEEeCC-----CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHH
Confidence 468999999953 24599999999999999999999999999999999999999999999999988642 1 23
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000284 1431 ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1510 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p 1510 (1723)
.++.++|+||++.+++.+|++||+.+....++...++.++++.++++.+++.+..++++.+||||||||++|||||+.+|
T Consensus 76 ~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p 155 (214)
T cd03292 76 LRRKIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRALPAELSGGEQQRVAIARAIVNSP 155 (214)
T ss_pred HHHheEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCChhhcCHHHHHHHHHHHHHHcCC
Confidence 56789999999999999999999988766555555555667888999999988889999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEE
Q 000284 1511 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQL 1571 (1723)
Q Consensus 1511 ~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l 1571 (1723)
+++||||||+|||+.+++.+++.|+++++ +| +|||++||++++++.+|||+++|++|++
T Consensus 156 ~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~-~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 156 TILIADEPTGNLDPDTTWEIMNLLKKINK-AG-TTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999853 44 5899999999999999999999999974
No 250
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=1.7e-41 Score=390.79 Aligned_cols=204 Identities=32% Similarity=0.448 Sum_probs=182.5
Q ss_pred CccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccceEEEe-cCCCCCCCCC
Q 000284 1371 DAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRLIGYCP-QFDALLEYLT 1449 (1723)
Q Consensus 1371 ~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~~ig~~p-Q~~~l~~~lT 1449 (1723)
+.+.+++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.......++++||+| |++.+++.+|
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~t 111 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWDLP 111 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEccccchhhcccEEEEcCCccccCCCCc
Confidence 345799999999999999999999999999999999999999999999999987544445677899998 5577888899
Q ss_pred HHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHH
Q 000284 1450 VQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRF 1529 (1723)
Q Consensus 1450 v~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vllLDEPT~gLD~~~~~~ 1529 (1723)
++||+.+....++....+..+.+.++++.+++.+..++++.+||||||||++||+||+.+|++|||||||+|||+.+++.
T Consensus 112 v~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~ 191 (236)
T cd03267 112 VIDSFYLLAAIYDLPPARFKKRLDELSELLDLEELLDTPVRQLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQEN 191 (236)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHH
Confidence 99999887766666555556677889999999988899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000284 1530 MWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1575 (1723)
Q Consensus 1530 l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g 1575 (1723)
+.+.|++++++.+ +|||++||++++++.+|||+++|.+|++++.|
T Consensus 192 l~~~l~~~~~~~~-~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 192 IRNFLKEYNRERG-TTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHHHHHHHHhcCC-CEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 9999999864434 68999999999999999999999999998764
No 251
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-41 Score=394.02 Aligned_cols=220 Identities=29% Similarity=0.458 Sum_probs=196.4
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCC-----CcceEEEccccCCc---
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA--- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~--- 519 (1723)
..++++|+++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++..
T Consensus 6 ~~l~~~~l~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~ 81 (254)
T PRK14273 6 AIIETENLNLFYTD----FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNF 81 (254)
T ss_pred ceEEEeeeEEEeCC----ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccc
Confidence 47999999999953 3599999999999999999999999999999999999997 59999999998742
Q ss_pred cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCC----CcccccccCCCChhHHHHHH
Q 000284 520 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGL----ADKVNIVVRALSGGMKRKLS 594 (1723)
Q Consensus 520 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~v~~~l~~~~l----~~~~~~~~~~LSgGqkqrl~ 594 (1723)
.....|+.+||+||++.+++ +||+||+.+.....+. .....++++.++++.+++ .+..++++++||||||||++
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgG~~qrv~ 160 (254)
T PRK14273 82 DILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVKDKLNTNALSLSGGQQQRLC 160 (254)
T ss_pred cHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhCCcccCCHHHHHHHH
Confidence 23456788999999998885 8999999987655443 344556788899999997 34578899999999999999
Q ss_pred HHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 595 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 595 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
|||||+.+|++|||||||+|||+.+++.++++|+++++++|||++||+++++..+||||++|++|++++.|++.++.+
T Consensus 161 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 238 (254)
T PRK14273 161 IARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDELFF 238 (254)
T ss_pred HHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 999999999999999999999999999999999999878999999999999999999999999999999999887754
No 252
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-41 Score=399.02 Aligned_cols=222 Identities=31% Similarity=0.448 Sum_probs=196.9
Q ss_pred eEEEEeEEEEecCcCC-ccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-----cHH
Q 000284 449 CIQIRKLHKVYATKRG-NCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-----DMD 522 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~-~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-----~~~ 522 (1723)
.++++||++.|+++.. .+.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +..
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (280)
T PRK13649 2 GINLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIK 81 (280)
T ss_pred eEEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHH
Confidence 3789999999964211 1369999999999999999999999999999999999999999999999998753 235
Q ss_pred HHhcceEEEccCC--CCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-cccccccCCCChhHHHHHHHHHHH
Q 000284 523 EIRKGLGVCPQYD--ILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA-DKVNIVVRALSGGMKRKLSLGIAL 599 (1723)
Q Consensus 523 ~~r~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~LSgGqkqrl~lA~al 599 (1723)
..|+.|||+||++ .+++ .||+||+.+.....+.+.++.+++++++++.+||. ...++++.+||||||||++||+||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al 160 (280)
T PRK13649 82 QIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISESLFEKNPFELSGGQMRRVAIAGIL 160 (280)
T ss_pred HHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHH
Confidence 5778899999997 4565 69999998876555666666677889999999997 467999999999999999999999
Q ss_pred hcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 600 IGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 600 ~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
+.+|++|||||||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++|++|++++.|++.++.
T Consensus 161 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 161 AMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIF 233 (280)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999999986 4899999999999999999999999999999999987764
No 253
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=3.1e-41 Score=404.76 Aligned_cols=229 Identities=25% Similarity=0.422 Sum_probs=202.4
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCC---cceEEEccccCCc-c---
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPT---TGDALVFGKNITA-D--- 520 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~---~G~i~i~g~~i~~-~--- 520 (1723)
..++++||++.|+.+.+...+|+|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.. .
T Consensus 11 ~~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~ 90 (330)
T PRK09473 11 ALLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKE 90 (330)
T ss_pred ceEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHH
Confidence 57999999999975444467999999999999999999999999999999999999996 9999999999853 2
Q ss_pred HHHHh-cceEEEccCC--CCCCCCCHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHcCCCcc---cccccCCCChhHHHHH
Q 000284 521 MDEIR-KGLGVCPQYD--ILFPELTVREHLEMFAVLK-GVKEELLESVVAEMVDEVGLADK---VNIVVRALSGGMKRKL 593 (1723)
Q Consensus 521 ~~~~r-~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~-g~~~~~~~~~v~~~l~~~~l~~~---~~~~~~~LSgGqkqrl 593 (1723)
....| +.|||+||++ .+++.+|+.+++....... +.+.++..+++.++++.+||.+. .++.+++||||||||+
T Consensus 91 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~~~~~~~~~p~~LSgG~~QRv 170 (330)
T PRK09473 91 LNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRV 170 (330)
T ss_pred HHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCChHHHhcCCcccCCHHHHHHH
Confidence 22334 5799999998 6899999999997765544 45666777889999999999753 4779999999999999
Q ss_pred HHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 594 SLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 594 ~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
+|||||+.+|++||+||||+|||+.++++++++|+++++ |.|+|++|||++++..+||||++|.+|++++.|++.++.
T Consensus 171 ~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~~~~i~ 250 (330)
T PRK09473 171 MIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNARDVF 250 (330)
T ss_pred HHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999999999853 899999999999999999999999999999999998886
Q ss_pred hhhCC
Q 000284 672 HQYGV 676 (1723)
Q Consensus 672 ~~~g~ 676 (1723)
+....
T Consensus 251 ~~p~~ 255 (330)
T PRK09473 251 YQPSH 255 (330)
T ss_pred hCCCC
Confidence 65433
No 254
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-41 Score=393.26 Aligned_cols=221 Identities=29% Similarity=0.451 Sum_probs=196.9
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCC-----CcceEEEccccCC---c
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNIT---A 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~---~ 519 (1723)
..|+++||+|.|++ +.+++|+||++.+||+++|+||||||||||+++|+|+++| ++|+|.++|.++. .
T Consensus 3 ~~l~~~~l~~~~~~----~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~ 78 (253)
T PRK14267 3 FAIETVNLRVYYGS----NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDV 78 (253)
T ss_pred ceEEEEeEEEEeCC----eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEcccccc
Confidence 36899999999953 4699999999999999999999999999999999999997 4999999999885 2
Q ss_pred cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHH
Q 000284 520 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV--KEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKL 593 (1723)
Q Consensus 520 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~--~~~~~~~~v~~~l~~~~l~----~~~~~~~~~LSgGqkqrl 593 (1723)
+....|+++||+||++.+++.+||.||+.+....++. +.+..+++++++++.+|+. +..++.+.+||||||||+
T Consensus 79 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv 158 (253)
T PRK14267 79 DPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKDRLNDYPSNLSGGQRQRL 158 (253)
T ss_pred ChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhhhhccChhhCCHHHHHHH
Confidence 3345678899999999999999999999887654443 3445566788999999984 356889999999999999
Q ss_pred HHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 594 SLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 594 ~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
+|||||+.+|+++||||||+|||+.++++++++|+++++++|||++||+++++..+||||++|++|++++.|++.++..
T Consensus 159 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 237 (253)
T PRK14267 159 VIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRKVFE 237 (253)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHHHh
Confidence 9999999999999999999999999999999999998778999999999999999999999999999999999877643
No 255
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-41 Score=392.23 Aligned_cols=219 Identities=26% Similarity=0.396 Sum_probs=196.6
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCC-----CcceEEEccccCCc-cHH
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA-DMD 522 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~-~~~ 522 (1723)
.++++||++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.. +..
T Consensus 3 ~l~~~~l~~~~~~----~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 78 (250)
T PRK14247 3 KIEIRDLKVSFGQ----VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVI 78 (250)
T ss_pred eEEEEeeEEEECC----eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHH
Confidence 5899999999953 4699999999999999999999999999999999999984 79999999998853 345
Q ss_pred HHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHcCCCc----ccccccCCCChhHHHHHHHH
Q 000284 523 EIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV--KEELLESVVAEMVDEVGLAD----KVNIVVRALSGGMKRKLSLG 596 (1723)
Q Consensus 523 ~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~--~~~~~~~~v~~~l~~~~l~~----~~~~~~~~LSgGqkqrl~lA 596 (1723)
..|+.+||+||++.+++.+||.||+.+.....+. +.++.++++.++++.+||.+ ..++.+.+||||||||++||
T Consensus 79 ~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~la 158 (250)
T PRK14247 79 ELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVKDRLDAPAGKLSGGQQQRLCIA 158 (250)
T ss_pred HHhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchhhhhcCCcccCCHHHHHHHHHH
Confidence 6678899999999888899999999886554432 34455678899999999853 56889999999999999999
Q ss_pred HHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 597 IALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 597 ~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
|||+.+|+++||||||+|||+.++++++++|+++++++|||++||+++++..+||||++|++|++++.|++.++.
T Consensus 159 ral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 159 RALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVF 233 (250)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHH
Confidence 999999999999999999999999999999999877899999999999999999999999999999999987764
No 256
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=2e-41 Score=388.78 Aligned_cols=217 Identities=27% Similarity=0.439 Sum_probs=187.2
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCcc----HHHH
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITAD----MDEI 524 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~----~~~~ 524 (1723)
.|+++||++.|+++.+...+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ....
T Consensus 1 ~l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (228)
T cd03257 1 LLEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIR 80 (228)
T ss_pred CeEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHh
Confidence 378999999996431113699999999999999999999999999999999999999999999999988542 2456
Q ss_pred hcceEEEccCC--CCCCCCCHHHHHHHHHHhcCCCH-HHHHHH-HHHHHHHcCCC-cccccccCCCChhHHHHHHHHHHH
Q 000284 525 RKGLGVCPQYD--ILFPELTVREHLEMFAVLKGVKE-ELLESV-VAEMVDEVGLA-DKVNIVVRALSGGMKRKLSLGIAL 599 (1723)
Q Consensus 525 r~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~g~~~-~~~~~~-v~~~l~~~~l~-~~~~~~~~~LSgGqkqrl~lA~al 599 (1723)
|+.+||+||++ .+++.+||+||+.+.....+... ++..++ ++++++.+++. ...++++.+||||||||++|||||
T Consensus 81 ~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral 160 (228)
T cd03257 81 RKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPEEVLNRYPHELSGGQRQRVAIARAL 160 (228)
T ss_pred hccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCChhHhhCCchhcCHHHHHHHHHHHHH
Confidence 78899999998 46778999999987655444322 222223 36889999995 578999999999999999999999
Q ss_pred hcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEec
Q 000284 600 IGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 665 (1723)
Q Consensus 600 ~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~G 665 (1723)
+.+|++|||||||+|||+.+++.++++|++++ + |+|||++||+++++..+||||++|++|++++.|
T Consensus 161 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 161 ALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred hcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 99999999999999999999999999999985 3 899999999999999999999999999998654
No 257
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-41 Score=393.08 Aligned_cols=223 Identities=28% Similarity=0.433 Sum_probs=193.9
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-hHH-
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-PKA- 1430 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-~~~- 1430 (1723)
.+++++|++|.|++ +.+++++||++++||++||+||||||||||+++|+|+++|++|+|.++|.++... ...
T Consensus 4 ~~l~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 77 (255)
T PRK11300 4 PLLSVSGLMMRFGG------LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQI 77 (255)
T ss_pred ceEEEeeEEEEECC------EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHH
Confidence 47999999999953 4699999999999999999999999999999999999999999999999998652 222
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHH-------cCC------C--hhhHHHHHHHHHHHcCCccccCCCCCCCChh
Q 000284 1431 ARRLIGYCPQFDALLEYLTVQEHLELYARI-------KGV------A--EYRMDDVVMEKLVEFDLLKHAKKPSFTLSGG 1495 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~-------~g~------~--~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG 1495 (1723)
.+..++|+||++.+++.+|++||+.+.... .+. . ..+..+.+.++++.+++.+..++++++||||
T Consensus 78 ~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G 157 (255)
T PRK11300 78 ARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANRQAGNLAYG 157 (255)
T ss_pred HhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhCChhhCCHH
Confidence 345699999999999999999999874321 011 1 1122346778899999988899999999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000284 1496 NKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1575 (1723)
Q Consensus 1496 ~kqrl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g 1575 (1723)
||||++||+||+.+|++|||||||+|||+.+++.+++.|.+++++.| +|||++||+++++..+|||+++|++|++++.|
T Consensus 158 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~-~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 236 (255)
T PRK11300 158 QQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHN-VTVLLIEHDMKLVMGISDRIYVVNQGTPLANG 236 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcC-CEEEEEeCCHHHHHHhCCEEEEEECCeEEecC
Confidence 99999999999999999999999999999999999999999864434 58999999999999999999999999999999
Q ss_pred ChhHHHh
Q 000284 1576 SPQHLKT 1582 (1723)
Q Consensus 1576 ~~~~l~~ 1582 (1723)
+++++.+
T Consensus 237 ~~~~~~~ 243 (255)
T PRK11300 237 TPEEIRN 243 (255)
T ss_pred CHHHHhh
Confidence 9887643
No 258
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.6e-41 Score=382.84 Aligned_cols=204 Identities=30% Similarity=0.466 Sum_probs=179.3
Q ss_pred EEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccce
Q 000284 1356 YLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRLI 1435 (1723)
Q Consensus 1356 ~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~~i 1435 (1723)
+++|++|+|+++ +.+++++||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ...++++
T Consensus 1 ~~~~l~~~~~~~-----~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~--~~~~~~i 73 (205)
T cd03226 1 RIENISFSYKKG-----TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA--KERRKSI 73 (205)
T ss_pred CcccEEEEeCCc-----CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh--HHhhcce
Confidence 368999999631 459999999999999999999999999999999999999999999999998753 3456789
Q ss_pred EEEecCCC-CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000284 1436 GYCPQFDA-LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1514 (1723)
Q Consensus 1436 g~~pQ~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vll 1514 (1723)
||+||++. .+..+|++||+.+.....+. ..+++.++++.+++.+..++++.+||||||||++|||||+.+|++||
T Consensus 74 ~~~~q~~~~~~~~~tv~e~l~~~~~~~~~----~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~lll 149 (205)
T cd03226 74 GYVMQDVDYQLFTDSVREELLLGLKELDA----GNEQAETVLKDLDLYALKERHPLSLSGGQKQRLAIAAALLSGKDLLI 149 (205)
T ss_pred EEEecChhhhhhhccHHHHHhhhhhhcCc----cHHHHHHHHHHcCCchhcCCCchhCCHHHHHHHHHHHHHHhCCCEEE
Confidence 99999974 23457999999876543321 12467889999999988999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEE
Q 000284 1515 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLR 1572 (1723)
Q Consensus 1515 LDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~ 1572 (1723)
|||||+|||+.+++.+++.|+++++ +| +|||++||++++++.+|||+++|++|+++
T Consensus 150 lDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 150 FDEPTSGLDYKNMERVGELIRELAA-QG-KAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999863 44 58999999999999999999999999974
No 259
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-41 Score=393.27 Aligned_cols=219 Identities=27% Similarity=0.412 Sum_probs=195.6
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhcc
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 527 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 527 (1723)
+|+++||+|.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. .....++.
T Consensus 2 ~l~~~~l~~~~~~----~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~ 77 (258)
T PRK13548 2 MLEARNLSVRLGG----RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARR 77 (258)
T ss_pred eEEEEeEEEEeCC----eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhh
Confidence 5889999999953 469999999999999999999999999999999999999999999999998753 33455678
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHh------c
Q 000284 528 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALI------G 601 (1723)
Q Consensus 528 ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~------~ 601 (1723)
+||+||++.+++.+||+||+.+.....+...++.+++++++++.+|+.+..++.+.+||||||||++||+||+ .
T Consensus 78 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGe~qrv~la~al~~~~~~~~ 157 (258)
T PRK13548 78 RAVLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAGRDYPQLSGGEQQRVQLARVLAQLWEPDG 157 (258)
T ss_pred eEEEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHhcccccCC
Confidence 9999999988788999999988654333333445567889999999998889999999999999999999999 5
Q ss_pred CCcEeeccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 602 DSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 602 ~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
+|+++||||||+|||+.+++.+.++|++++ +|+|||++||+++++..+||||++|++|+++..|++.++.
T Consensus 158 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 158 PPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVL 229 (258)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHh
Confidence 999999999999999999999999999985 4899999999999999999999999999999999876653
No 260
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-41 Score=394.96 Aligned_cols=224 Identities=24% Similarity=0.388 Sum_probs=198.4
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHh
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAA 1431 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~ 1431 (1723)
++|+++|++|.|++. .+.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|+++|.++.. .....
T Consensus 6 ~~l~i~~l~~~~~~~----~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~ 81 (269)
T PRK13648 6 SIIVFKNVSFQYQSD----ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKL 81 (269)
T ss_pred ceEEEEEEEEEcCCC----CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHH
Confidence 579999999999642 2458999999999999999999999999999999999999999999999999864 34456
Q ss_pred ccceEEEecCCC-CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000284 1432 RRLIGYCPQFDA-LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1510 (1723)
Q Consensus 1432 ~~~ig~~pQ~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p 1510 (1723)
++++||+||++. +++..|+++|+.+.....+.+.++..+.+.++++.+++.+..++++.+||||||||++|||||+.+|
T Consensus 82 ~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 161 (269)
T PRK13648 82 RKHIGIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERADYEPNALSGGQKQRVAIAGVLALNP 161 (269)
T ss_pred HhheeEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 788999999974 6777899999987655555555555667888999999998899999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1511 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1511 ~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
++|||||||+|||+.+++.+++.|++++++.| +|||++||+++++.. ||||++|++|++++.|+++++.+
T Consensus 162 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~-~tiiivtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~~~~ 231 (269)
T PRK13648 162 SVIILDEATSMLDPDARQNLLDLVRKVKSEHN-ITIISITHDLSEAME-ADHVIVMNKGTVYKEGTPTEIFD 231 (269)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCchHHhc-CCEEEEEECCEEEEecCHHHHhc
Confidence 99999999999999999999999999864334 689999999999986 99999999999999999988754
No 261
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=6.2e-41 Score=402.15 Aligned_cols=229 Identities=24% Similarity=0.407 Sum_probs=199.2
Q ss_pred cceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCC---ceEEEEcCeeCCCC-
Q 000284 1352 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPT---DGTAFIFGKDIRSD- 1427 (1723)
Q Consensus 1352 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~---~G~i~i~G~~i~~~- 1427 (1723)
+++|+++||++.|+... +...+|+|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.++|+++...
T Consensus 10 ~~~L~i~~l~~~~~~~~--~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~ 87 (330)
T PRK09473 10 DALLDVKDLRVTFSTPD--GDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLP 87 (330)
T ss_pred CceEEEeCeEEEEecCC--CCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCC
Confidence 45799999999996421 2356999999999999999999999999999999999999996 99999999998652
Q ss_pred hHH---hc-cceEEEecCC--CCCCCCCHHHHHHHHHHHc-CCChhhHHHHHHHHHHHcCCcc---ccCCCCCCCChhHH
Q 000284 1428 PKA---AR-RLIGYCPQFD--ALLEYLTVQEHLELYARIK-GVAEYRMDDVVMEKLVEFDLLK---HAKKPSFTLSGGNK 1497 (1723)
Q Consensus 1428 ~~~---~~-~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~-g~~~~~~~~~~~~~l~~~~l~~---~~~~~~~~LSgG~k 1497 (1723)
..+ .| ++|||+||++ .+.+.+|+.+++....... +....+..+++.++++.++|.+ ..++++++||||||
T Consensus 88 ~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~~~~~~~~~p~~LSgG~~ 167 (330)
T PRK09473 88 EKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMR 167 (330)
T ss_pred HHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCChHHHhcCCcccCCHHHH
Confidence 222 23 5799999997 7889999999987655443 4555556677889999999964 35789999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecCh
Q 000284 1498 RKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSP 1577 (1723)
Q Consensus 1498 qrl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~ 1577 (1723)
||++|||||+.+|++||+||||+|||+.+++.++++|++++++.| .|||++|||++++..+||||++|.+|++++.|++
T Consensus 168 QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g-~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~~ 246 (330)
T PRK09473 168 QRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFN-TAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNA 246 (330)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcC-CEEEEEECCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999999999999975444 6899999999999999999999999999999999
Q ss_pred hHHHhh
Q 000284 1578 QHLKTR 1583 (1723)
Q Consensus 1578 ~~l~~~ 1583 (1723)
+++.+.
T Consensus 247 ~~i~~~ 252 (330)
T PRK09473 247 RDVFYQ 252 (330)
T ss_pred HHHHhC
Confidence 998754
No 262
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-41 Score=395.33 Aligned_cols=223 Identities=28% Similarity=0.438 Sum_probs=195.2
Q ss_pred cceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHH
Q 000284 1352 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKA 1430 (1723)
Q Consensus 1352 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~ 1430 (1723)
+.+|+++|+++.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ....
T Consensus 9 ~~~l~i~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~ 82 (265)
T PRK10575 9 DTTFALRNVSFRVPG------RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKA 82 (265)
T ss_pred CceEEEeeEEEEECC------EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHH
Confidence 357999999999953 469999999999999999999999999999999999999999999999998754 3445
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHH-HcC---CChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHH
Q 000284 1431 ARRLIGYCPQFDALLEYLTVQEHLELYAR-IKG---VAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAM 1506 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~-~~g---~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al 1506 (1723)
.++.+||+||++.+++.+|+.||+.+... ..+ ......++++.++++.+++.+..++++++|||||||||+||+||
T Consensus 83 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral 162 (265)
T PRK10575 83 FARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAMLV 162 (265)
T ss_pred HhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCcccCCHHHHHHHHHHHHH
Confidence 66789999999888888999999986421 111 11223345678899999998888999999999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000284 1507 IGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1581 (1723)
Q Consensus 1507 ~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~ 1581 (1723)
+.+|+||||||||+|||+.+++.+++.|++++++.| +|||++||+++++..+||||++|++|+++..|+++++.
T Consensus 163 ~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~-~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (265)
T PRK10575 163 AQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERG-LTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELM 236 (265)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhc
Confidence 999999999999999999999999999999864434 58999999999999999999999999999999887764
No 263
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-41 Score=392.13 Aligned_cols=221 Identities=24% Similarity=0.427 Sum_probs=195.2
Q ss_pred cceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCCC
Q 000284 1352 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIRS 1426 (1723)
Q Consensus 1352 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p-----~~G~i~i~G~~i~~ 1426 (1723)
.++|+++|+++.|++ +.+++|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|+++..
T Consensus 10 ~~~l~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~ 83 (258)
T PRK14268 10 QPQIKVENLNLWYGE------KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYE 83 (258)
T ss_pred ceeEEEeeeEEEeCC------eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEccc
Confidence 357999999999953 4599999999999999999999999999999999999985 89999999998753
Q ss_pred C---hHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHH
Q 000284 1427 D---PKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRK 1499 (1723)
Q Consensus 1427 ~---~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~kqr 1499 (1723)
. ....++.+||+||++.+++ +|++||+.+.....+.+.....+.+.++++.+++. +..++++.+||||||||
T Consensus 84 ~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qr 162 (258)
T PRK14268 84 PDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETSDRLKSPALSLSGGQQQR 162 (258)
T ss_pred ccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchhhhhcCChhhCCHHHHHH
Confidence 2 2345678999999998887 89999998766555655545556678899999883 45789999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000284 1500 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1579 (1723)
Q Consensus 1500 l~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~ 1579 (1723)
|+|||||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|++|++++.|++++
T Consensus 163 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~-~-~-~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 239 (258)
T PRK14268 163 LCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLK-K-D-YTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQ 239 (258)
T ss_pred HHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-h-C-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999999984 3 4 689999999999999999999999999999999988
Q ss_pred HHh
Q 000284 1580 LKT 1582 (1723)
Q Consensus 1580 l~~ 1582 (1723)
+.+
T Consensus 240 ~~~ 242 (258)
T PRK14268 240 IFH 242 (258)
T ss_pred Hhc
Confidence 754
No 264
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=3.7e-41 Score=386.47 Aligned_cols=219 Identities=26% Similarity=0.440 Sum_probs=186.1
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCCh----H
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDP----K 1429 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~----~ 1429 (1723)
+|+++|++++|++.. ....+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.... .
T Consensus 1 ~l~~~~v~~~~~~~~--~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (228)
T cd03257 1 LLEVKNLSVSFPTGG--GSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRK 78 (228)
T ss_pred CeEEEeeeEeccCCC--cceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHH
Confidence 478999999996421 0126999999999999999999999999999999999999999999999999986532 3
Q ss_pred HhccceEEEecCC--CCCCCCCHHHHHHHHHHHcCCCh-hhHHHH-HHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHH
Q 000284 1430 AARRLIGYCPQFD--ALLEYLTVQEHLELYARIKGVAE-YRMDDV-VMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAI 1504 (1723)
Q Consensus 1430 ~~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g~~~-~~~~~~-~~~~l~~~~l~-~~~~~~~~~LSgG~kqrl~iA~ 1504 (1723)
..++++||+||++ .+++.+|++||+.+.....+... ....+. +.++++.+++. ...++++.+||||||||++|||
T Consensus 79 ~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~lar 158 (228)
T cd03257 79 IRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPEEVLNRYPHELSGGQRQRVAIAR 158 (228)
T ss_pred HhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCChhHhhCCchhcCHHHHHHHHHHH
Confidence 4567899999998 56678999999987654443222 122222 35788999995 5789999999999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000284 1505 AMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1575 (1723)
Q Consensus 1505 al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g 1575 (1723)
||+.+|++|||||||+|||+.+++.+++.|++++++.| +|||++||++++++.+|||+++|++|++++.|
T Consensus 159 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 159 ALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELG-LTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 99999999999999999999999999999999864434 58999999999999999999999999998754
No 265
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-41 Score=389.01 Aligned_cols=219 Identities=25% Similarity=0.416 Sum_probs=192.0
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-hH-H
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-PK-A 1430 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-~~-~ 1430 (1723)
++++++|++|.|++ +.+++++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... .. .
T Consensus 4 ~~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~ 77 (237)
T PRK11614 4 VMLSFDKVSAHYGK------IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKI 77 (237)
T ss_pred cEEEEEeEEEeeCC------ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHH
Confidence 47999999999952 4699999999999999999999999999999999999999999999999988653 22 3
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHc-CCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000284 1431 ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEF-DLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1509 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~-~l~~~~~~~~~~LSgG~kqrl~iA~al~~~ 1509 (1723)
.++.+||+||++.+++.+|++||+.+..... ...+.++.+.++++.+ ++.+..++++.+||||||||++|||||+.+
T Consensus 78 ~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--~~~~~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 78 MREAVAIVPEGRRVFSRMTVEENLAMGGFFA--ERDQFQERIKWVYELFPRLHERRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred HHhCEEEeccCcccCCCCcHHHHHHHhhhcc--ChhHHHHHHHHHHHHHHHHHHHHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 5678999999999998899999998743222 1223344566777877 577778889999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000284 1510 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1581 (1723)
Q Consensus 1510 p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~ 1581 (1723)
|++|||||||+|||+.+++.+++.|+++++ +| +|||++||+++++..+|||+++|++|+++..|+++++.
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 225 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLRE-QG-MTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALL 225 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHh
Confidence 999999999999999999999999999863 44 58999999999999999999999999999999998875
No 266
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=5.2e-41 Score=393.69 Aligned_cols=229 Identities=23% Similarity=0.351 Sum_probs=196.8
Q ss_pred ceEEEEeEEEEcCCCCc---cCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h
Q 000284 1353 AIIYLRNLRKVYPGGKR---SDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P 1428 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~---~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-~ 1428 (1723)
++|+++||+|+|++... .+.+.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... .
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~ 82 (267)
T PRK15112 3 TLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDY 82 (267)
T ss_pred ceEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCch
Confidence 47999999999963110 1134699999999999999999999999999999999999999999999999998642 3
Q ss_pred HHhccceEEEecCCC--CCCCCCHHHHHHHHHHHc-CCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHH
Q 000284 1429 KAARRLIGYCPQFDA--LLEYLTVQEHLELYARIK-GVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAI 1504 (1723)
Q Consensus 1429 ~~~~~~ig~~pQ~~~--l~~~lTv~e~l~~~~~~~-g~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~kqrl~iA~ 1504 (1723)
...++.+||+||++. +++.+|+.+++.+..... +....+..+.+.++++.+++. ...++++.+|||||||||+||+
T Consensus 83 ~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~lar 162 (267)
T PRK15112 83 SYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHASYYPHMLAPGQKQRLGLAR 162 (267)
T ss_pred hhHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHhcCchhcCHHHHHHHHHHH
Confidence 334567999999974 567889999998765543 334444556788899999994 6778899999999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1505 AMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1505 al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
||+.+|+||||||||+|||+.+++.+++.|++++++.| +|||++||+++++..+|||+++|++|+++..|+++++.+
T Consensus 163 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 239 (267)
T PRK15112 163 ALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQG-ISYIYVTQHLGMMKHISDQVLVMHQGEVVERGSTADVLA 239 (267)
T ss_pred HHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcC-cEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHhc
Confidence 99999999999999999999999999999999864434 689999999999999999999999999999999888764
No 267
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-41 Score=391.28 Aligned_cols=210 Identities=27% Similarity=0.419 Sum_probs=188.0
Q ss_pred cceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHh
Q 000284 1352 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAA 1431 (1723)
Q Consensus 1352 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~ 1431 (1723)
.++|+++|++|+|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. ..
T Consensus 10 ~~~l~i~~l~~~~~~------~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~----~~ 79 (257)
T PRK11247 10 GTPLLLNAVSKRYGE------RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA----EA 79 (257)
T ss_pred CCcEEEEEEEEEECC------cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH----Hh
Confidence 357999999999963 45999999999999999999999999999999999999999999999998753 35
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000284 1432 RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1511 (1723)
Q Consensus 1432 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~ 1511 (1723)
++.+||+||++.+++.+|++||+.+.. .. ..++++.++++.+++.+..++++.+|||||||||+|||||+.+|+
T Consensus 80 ~~~i~~v~q~~~l~~~~tv~enl~~~~--~~----~~~~~~~~~l~~~gl~~~~~~~~~~LSgGqkqrl~laraL~~~p~ 153 (257)
T PRK11247 80 REDTRLMFQDARLLPWKKVIDNVGLGL--KG----QWRDAALQALAAVGLADRANEWPAALSGGQKQRVALARALIHRPG 153 (257)
T ss_pred hCceEEEecCccCCCCCcHHHHHHhcc--cc----hHHHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 678999999999998899999998642 11 124567789999999988999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChh
Q 000284 1512 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQ 1578 (1723)
Q Consensus 1512 vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~ 1578 (1723)
+|||||||+|||+.+++.+++.|+++.++.+ +|||++|||+++++.+||||++|++|++++.|+.+
T Consensus 154 lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~-~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 154 LLLLDEPLGALDALTRIEMQDLIESLWQQHG-FTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999999999999864444 58999999999999999999999999999888654
No 268
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-41 Score=396.20 Aligned_cols=225 Identities=27% Similarity=0.468 Sum_probs=195.6
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-----Ch
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-----DP 1428 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-----~~ 1428 (1723)
.|+++|++|.|++... ..+.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++.. ..
T Consensus 2 ~l~~~~l~~~~~~~~~-~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 80 (280)
T PRK13649 2 GINLQNVSYTYQAGTP-FEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDI 80 (280)
T ss_pred eEEEEEEEEEcCCCCc-cccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCH
Confidence 3789999999964210 11459999999999999999999999999999999999999999999999998753 23
Q ss_pred HHhccceEEEecCC--CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHH
Q 000284 1429 KAARRLIGYCPQFD--ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIA 1505 (1723)
Q Consensus 1429 ~~~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~kqrl~iA~a 1505 (1723)
...++.|||+||++ .+++ .|++||+.+.....+...++..+.+.++++.++|. ...++++.+||||||||++||+|
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~a 159 (280)
T PRK13649 81 KQIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISESLFEKNPFELSGGQMRRVAIAGI 159 (280)
T ss_pred HHHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHH
Confidence 45677899999996 4555 69999998766555555555566778899999997 46799999999999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1506 MIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1506 l~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
|+.+|++|||||||+|||+.+++.+++.|+++++ +| +|||++||+++++..+|||+++|++|++++.|+++++.+
T Consensus 160 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 234 (280)
T PRK13649 160 LAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ-SG-MTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQ 234 (280)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999999863 44 589999999999999999999999999999999988754
No 269
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=3.8e-41 Score=386.26 Aligned_cols=215 Identities=25% Similarity=0.446 Sum_probs=190.5
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHH---H
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMD---E 523 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~---~ 523 (1723)
..|+++||++.|++......+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. +.. .
T Consensus 5 ~~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 84 (228)
T PRK10584 5 NIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAK 84 (228)
T ss_pred ceEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHH
Confidence 469999999999642111359999999999999999999999999999999999999999999999998753 221 2
Q ss_pred H-hcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcC
Q 000284 524 I-RKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGD 602 (1723)
Q Consensus 524 ~-r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~ 602 (1723)
. ++.+||+||++.+++.+|+.||+.+....++.+..+.++++.++++.+++.+..++.+.+||||||||++||+||+.+
T Consensus 85 ~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Ge~qrl~la~al~~~ 164 (228)
T PRK10584 85 LRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARAFNGR 164 (228)
T ss_pred HHhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 2 367999999999999999999998866555555556677899999999999888999999999999999999999999
Q ss_pred CcEeeccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEE
Q 000284 603 SKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKC 663 (1723)
Q Consensus 603 p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~ 663 (1723)
|+++||||||+|||+.+++.++++|++++ + |+|||++||++++++. |||+++|++|++++
T Consensus 165 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~-~d~i~~l~~g~i~~ 226 (228)
T PRK10584 165 PDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAAR-CDRRLRLVNGQLQE 226 (228)
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHh-CCEEEEEECCEEEe
Confidence 99999999999999999999999999984 3 8999999999999965 99999999999864
No 270
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-41 Score=388.57 Aligned_cols=220 Identities=26% Similarity=0.399 Sum_probs=195.0
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-------
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS------- 1426 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~------- 1426 (1723)
+++++|+++.|++ +.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++..
T Consensus 2 ~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 75 (242)
T PRK11124 2 SIQLNGINCFYGA------HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDK 75 (242)
T ss_pred EEEEEeeEEEECC------eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchh
Confidence 5889999999953 459999999999999999999999999999999999999999999999998731
Q ss_pred ChHHhccceEEEecCCCCCCCCCHHHHHHH-HHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHH
Q 000284 1427 DPKAARRLIGYCPQFDALLEYLTVQEHLEL-YARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIA 1505 (1723)
Q Consensus 1427 ~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~-~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~a 1505 (1723)
.....+++|||+||++.+++.+|+.||+.+ .....+....+..+.+.++++.+|+.+..++++.+||||||||++||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~lara 155 (242)
T PRK11124 76 AIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYADRFPLHLSGGQQQRVAIARA 155 (242)
T ss_pred hHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHH
Confidence 123456789999999999999999999975 3334455544455678889999999888899999999999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000284 1506 MIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1581 (1723)
Q Consensus 1506 l~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~ 1581 (1723)
|+.+|++|||||||+|||+.+++.+++.|++++ ++| +|||++||+++++..+|||+++|.+|+++..|+++++.
T Consensus 156 l~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~-~~~-~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 229 (242)
T PRK11124 156 LMMEPQVLLFDEPTAALDPEITAQIVSIIRELA-ETG-ITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFT 229 (242)
T ss_pred HhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHH-HcC-CEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhc
Confidence 999999999999999999999999999999985 344 58999999999999999999999999999999887653
No 271
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3.3e-41 Score=387.35 Aligned_cols=217 Identities=29% Similarity=0.397 Sum_probs=189.7
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-hH-Hhc
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-PK-AAR 1432 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-~~-~~~ 1432 (1723)
|+++||++.|++ +.+++|+||++++||++||+|+||||||||+++|+|+++|++|+|.++|.++... .. ..+
T Consensus 1 l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 74 (230)
T TIGR03410 1 LEVSNLNVYYGQ------SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERAR 74 (230)
T ss_pred CEEEeEEEEeCC------eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHH
Confidence 468999999963 4699999999999999999999999999999999999999999999999988642 22 235
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcC-CccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000284 1433 RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFD-LLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1511 (1723)
Q Consensus 1433 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~-l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~ 1511 (1723)
+++||+||++.+++.+|++||+.+.....+.. ..+...++++.++ +.+..++++.+||||||||++||+||+.+|+
T Consensus 75 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~---~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ 151 (230)
T TIGR03410 75 AGIAYVPQGREIFPRLTVEENLLTGLAALPRR---SRKIPDEIYELFPVLKEMLGRRGGDLSGGQQQQLAIARALVTRPK 151 (230)
T ss_pred hCeEEeccCCcccCCCcHHHHHHHHHHhcCcc---hHHHHHHHHHHHHhHHHHhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 68999999999999999999998765544322 1234566777776 5677899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000284 1512 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1581 (1723)
Q Consensus 1512 vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~ 1581 (1723)
+|||||||+|||+.+++.+++.|++++++.+ +|||++||+++++..+|||+++|++|++++.|+++++.
T Consensus 152 illlDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 152 LLLLDEPTEGIQPSIIKDIGRVIRRLRAEGG-MAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred EEEecCCcccCCHHHHHHHHHHHHHHHHcCC-cEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 9999999999999999999999999864334 68999999999999999999999999999999988763
No 272
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=2.9e-41 Score=383.26 Aligned_cols=209 Identities=27% Similarity=0.450 Sum_probs=186.4
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC---ChHHh
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS---DPKAA 1431 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~---~~~~~ 1431 (1723)
++++|+++.|++ +.+++++||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .....
T Consensus 1 l~~~~l~~~~~~------~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 74 (213)
T cd03262 1 IEIKNLHKSFGD------FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINEL 74 (213)
T ss_pred CEEEEEEEEECC------eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHH
Confidence 468999999963 459999999999999999999999999999999999999999999999998853 23345
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHH-HcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000284 1432 RRLIGYCPQFDALLEYLTVQEHLELYAR-IKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1510 (1723)
Q Consensus 1432 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~-~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p 1510 (1723)
++++||+||++.+++.+|++||+.+... .++....+.++++.++++.+++.+..++++.+||||||||++||+||+.+|
T Consensus 75 ~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p 154 (213)
T cd03262 75 RQKVGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMNP 154 (213)
T ss_pred HhcceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhhCccccCHHHHHHHHHHHHHhcCC
Confidence 7789999999999988999999987643 345544445567888999999988889999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEE
Q 000284 1511 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQL 1571 (1723)
Q Consensus 1511 ~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l 1571 (1723)
++|||||||+|||+.+++.+++.|+++++ .| +|||++||++++++.+|||+++|++|++
T Consensus 155 ~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~-~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 155 KVMLFDEPTSALDPELVGEVLDVMKDLAE-EG-MTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999864 44 5899999999999999999999999974
No 273
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=2.1e-41 Score=389.93 Aligned_cols=201 Identities=27% Similarity=0.468 Sum_probs=183.2
Q ss_pred ccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcceEEEc-cCCCCCCCCCH
Q 000284 465 NCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLGVCP-QYDILFPELTV 543 (1723)
Q Consensus 465 ~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig~~~-Q~~~l~~~lTv 543 (1723)
.+.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.......++.+||+| |++.+++.+|+
T Consensus 33 ~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~tv 112 (236)
T cd03267 33 EVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWDLPV 112 (236)
T ss_pred CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEccccchhhcccEEEEcCCccccCCCCcH
Confidence 45799999999999999999999999999999999999999999999999876544445677899998 56788889999
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeeccCCCCCCCHHHHHHH
Q 000284 544 REHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILDEPTSGMDPYSMRLT 623 (1723)
Q Consensus 544 ~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l 623 (1723)
+||+.+.....+...++.+++++++++.+|+.+..++++.+||||||||++||+||+.+|+++||||||+|||+.+++.+
T Consensus 113 ~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l 192 (236)
T cd03267 113 IDSFYLLAAIYDLPPARFKKRLDELSELLDLEELLDTPVRQLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENI 192 (236)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHH
Confidence 99999877777766666677888999999999888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEec
Q 000284 624 WQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 665 (1723)
Q Consensus 624 ~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~G 665 (1723)
.++|++++ +++|||++||+++++..+||++++|++|++++.|
T Consensus 193 ~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 193 RNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 99999985 3799999999999999999999999999998654
No 274
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=6.5e-42 Score=353.31 Aligned_cols=215 Identities=27% Similarity=0.447 Sum_probs=191.5
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcceE
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 529 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 529 (1723)
+.+++++..|+. .==.++++|+.||+++|+||+|||||||+|+|+|...|.+|+|.|+|.|.+... ..++-+.
T Consensus 2 l~L~~V~~~y~~------~~~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~-P~~RPVS 74 (231)
T COG3840 2 LALDDVRFSYGH------LPMRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASP-PAERPVS 74 (231)
T ss_pred ccccceEEeeCc------ceEEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCC-cccCChh
Confidence 567889999964 334788999999999999999999999999999999999999999999986432 2345699
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeec
Q 000284 530 VCPQYDILFPELTVREHLEMFAVLKGVK-EELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVIL 608 (1723)
Q Consensus 530 ~~~Q~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliL 608 (1723)
+++|++.||.+|||++|+.++.. .|+. ..+.+++++.++..+||..+.++.+.+||||||||++|||+|+.+-+|++|
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~-P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~~LSGGqRQRvALARclvR~~PilLL 153 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLS-PGLKLNAEQREKVEAAAAQVGLAGFLKRLPGELSGGQRQRVALARCLVREQPILLL 153 (231)
T ss_pred hhhhccccchhhhhhhhhcccCC-cccccCHHHHHHHHHHHHHhChhhHhhhCccccCchHHHHHHHHHHHhccCCeEEe
Confidence 99999999999999999988542 1222 234567899999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 609 DEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 609 DEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
|||+|+|||.-|.++..++.++. ++.|++++||+.+++..++||++++++|++...|+.+++..
T Consensus 154 DEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~ 219 (231)
T COG3840 154 DEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLS 219 (231)
T ss_pred cCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhc
Confidence 99999999999999999999985 48999999999999999999999999999999999876643
No 275
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-41 Score=395.13 Aligned_cols=218 Identities=30% Similarity=0.481 Sum_probs=195.4
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc---cHHHHhc
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA---DMDEIRK 526 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~---~~~~~r~ 526 (1723)
++++||++.|++ .+.+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|+++|.++.. .....++
T Consensus 2 l~~~~l~~~~~~---~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (275)
T PRK13639 2 LETRDLKYSYPD---GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRK 78 (275)
T ss_pred EEEEEEEEEeCC---CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHh
Confidence 789999999963 2359999999999999999999999999999999999999999999999998842 2335678
Q ss_pred ceEEEccCCC--CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCc
Q 000284 527 GLGVCPQYDI--LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSK 604 (1723)
Q Consensus 527 ~ig~~~Q~~~--l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~ 604 (1723)
.|||+||++. ++ .+||.||+.+.....+...++.++++.++++.+||.+..++++++||||||||++|||||+.+|+
T Consensus 79 ~i~~v~q~~~~~~~-~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LS~Gq~qrv~laral~~~p~ 157 (275)
T PRK13639 79 TVGIVFQNPDDQLF-APTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFENKPPHHLSGGQKKRVAIAGILAMKPE 157 (275)
T ss_pred heEEEeeChhhhhc-cccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 8999999973 45 46999999876544455566667788999999999998999999999999999999999999999
Q ss_pred EeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 605 VVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 605 vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
++||||||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++|++|++++.|++.++.
T Consensus 158 llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 225 (275)
T PRK13639 158 IIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVF 225 (275)
T ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999986 4899999999999999999999999999999999987763
No 276
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=6.3e-41 Score=390.23 Aligned_cols=221 Identities=25% Similarity=0.366 Sum_probs=195.6
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-------
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD------- 1427 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~------- 1427 (1723)
|+++||++.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...
T Consensus 1 i~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~ 74 (252)
T TIGR03005 1 VRFSDVTKRFGI------LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPL 74 (252)
T ss_pred CEEEEEEEEeCC------eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccc
Confidence 468999999963 4599999999999999999999999999999999999999999999999987531
Q ss_pred -------hHHhccceEEEecCCCCCCCCCHHHHHHHHHH-HcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHH
Q 000284 1428 -------PKAARRLIGYCPQFDALLEYLTVQEHLELYAR-IKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRK 1499 (1723)
Q Consensus 1428 -------~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~-~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqr 1499 (1723)
....++.+||++|++.+++.+|+.||+.+... ..+.......+.+.++++.+++.+..++.+.+||||||||
T Consensus 75 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qr 154 (252)
T TIGR03005 75 VPADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKADHMPAQLSGGQQQR 154 (252)
T ss_pred cccchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhhcChhhcCHHHHHH
Confidence 12457789999999999999999999987432 2344444555678889999999888899999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000284 1500 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1579 (1723)
Q Consensus 1500 l~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~ 1579 (1723)
++|||||+.+|++|||||||+|||+.+++.+++.|++++++.| +|||++||+++++..+|||+++|++|++++.|++++
T Consensus 155 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 233 (252)
T TIGR03005 155 VAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHD-LTMLLVTHEMGFAREFADRVCFFDKGRIVEQGKPDE 233 (252)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-cEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999999999864434 689999999999999999999999999999999887
Q ss_pred HHh
Q 000284 1580 LKT 1582 (1723)
Q Consensus 1580 l~~ 1582 (1723)
+.+
T Consensus 234 ~~~ 236 (252)
T TIGR03005 234 IFR 236 (252)
T ss_pred Hhc
Confidence 753
No 277
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-41 Score=392.09 Aligned_cols=219 Identities=26% Similarity=0.412 Sum_probs=195.8
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCC-----CcceEEEccccCCc---
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA--- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~--- 519 (1723)
..|+++||+|.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|+++|.++..
T Consensus 18 ~~l~~~nl~~~~~~----~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 18 IKMRARDVSVFYGE----KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred ceEEEEeEEEEECC----EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 57999999999953 4699999999999999999999999999999999999975 89999999998853
Q ss_pred cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHcCCCc----ccccccCCCChhHHHHH
Q 000284 520 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV--KEELLESVVAEMVDEVGLAD----KVNIVVRALSGGMKRKL 593 (1723)
Q Consensus 520 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~--~~~~~~~~v~~~l~~~~l~~----~~~~~~~~LSgGqkqrl 593 (1723)
+....|+.+||+||++.+++. ||.||+.+....++. +..+.++++.++++.+|+.+ ..++.+.+||||||||+
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv 172 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKDRLHEPGTGLSGGQQQRL 172 (267)
T ss_pred chHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHH
Confidence 334567889999999988875 999999887655543 33445677899999999964 46788999999999999
Q ss_pred HHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 594 SLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 594 ~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
+|||||+.+|++|||||||+|||+.+++.+.++|+++++++|||++||+++++..+|||+++|++|+++..|++.++.
T Consensus 173 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 173 CIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDTEKMF 250 (267)
T ss_pred HHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999877889999999999999999999999999999999987764
No 278
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-41 Score=388.08 Aligned_cols=218 Identities=25% Similarity=0.436 Sum_probs=193.8
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cH-HHHh
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DM-DEIR 525 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~-~~~r 525 (1723)
..++++||+|.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +. ...+
T Consensus 4 ~~l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~ 79 (237)
T PRK11614 4 VMLSFDKVSAHYGK----IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMR 79 (237)
T ss_pred cEEEEEeEEEeeCC----ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHH
Confidence 46999999999953 469999999999999999999999999999999999999999999999998754 22 2357
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-CCCcccccccCCCChhHHHHHHHHHHHhcCCc
Q 000284 526 KGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEV-GLADKVNIVVRALSGGMKRKLSLGIALIGDSK 604 (1723)
Q Consensus 526 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~-~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~ 604 (1723)
+.+||+||++.+++.+||.||+.+..... ...+.+++++++++.+ ++.+..++++++||||||||++|||||+.+|+
T Consensus 80 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--~~~~~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 157 (237)
T PRK11614 80 EAVAIVPEGRRVFSRMTVEENLAMGGFFA--ERDQFQERIKWVYELFPRLHERRIQRAGTMSGGEQQMLAIGRALMSQPR 157 (237)
T ss_pred hCEEEeccCcccCCCCcHHHHHHHhhhcc--ChhHHHHHHHHHHHHHHHHHHHHhCchhhCCHHHHHHHHHHHHHHhCCC
Confidence 78999999999999999999998754222 2233455677888888 58777888999999999999999999999999
Q ss_pred EeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 605 VVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 605 vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
++||||||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++|++|+++..|+++++.
T Consensus 158 illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 225 (237)
T PRK11614 158 LLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALL 225 (237)
T ss_pred EEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHh
Confidence 999999999999999999999999985 5899999999999999999999999999999999987774
No 279
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.9e-41 Score=386.14 Aligned_cols=217 Identities=29% Similarity=0.472 Sum_probs=196.8
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcceE
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 529 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 529 (1723)
|+++|+++.|++ ++++|+||++++||+++|+|+||||||||+++|+|+++|++|+|+++|.++..... .++.+|
T Consensus 1 l~~~~l~~~~~~-----~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~-~~~~i~ 74 (235)
T cd03299 1 LKVENLSKDWKE-----FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP-EKRDIS 74 (235)
T ss_pred CeeEeEEEEeCC-----ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh-hHcCEE
Confidence 468999999952 28999999999999999999999999999999999999999999999998754222 367899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeecc
Q 000284 530 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 609 (1723)
Q Consensus 530 ~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 609 (1723)
||||++.+++.+|+.||+.+.....+.+..+.++++.++++.+||.+..++++.+||||||||++||||++.+|++++||
T Consensus 75 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~llllD 154 (235)
T cd03299 75 YVPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRKPETLSGGEQQRVAIARALVVNPKILLLD 154 (235)
T ss_pred EEeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcCcccCCHHHHHHHHHHHHHHcCCCEEEEC
Confidence 99999999999999999987765556666667778899999999998899999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 610 EPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 610 EPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
|||+|||+.+++++|++|+++.+ |+|||++||+++++..+||||++|++|++++.|++..+..
T Consensus 155 EPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 219 (235)
T cd03299 155 EPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFK 219 (235)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHh
Confidence 99999999999999999999753 8999999999999999999999999999999999876643
No 280
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-41 Score=398.04 Aligned_cols=222 Identities=30% Similarity=0.444 Sum_probs=195.5
Q ss_pred eEEEEeEEEEecCcCC-ccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc------cH
Q 000284 449 CIQIRKLHKVYATKRG-NCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA------DM 521 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~-~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~------~~ 521 (1723)
.|+++||+|.|+++.+ ...+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. +.
T Consensus 6 ~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 85 (289)
T PRK13645 6 DIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKEV 85 (289)
T ss_pred eEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccccH
Confidence 5899999999964321 1359999999999999999999999999999999999999999999999998742 23
Q ss_pred HHHhcceEEEccCCC--CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-cccccccCCCChhHHHHHHHHHH
Q 000284 522 DEIRKGLGVCPQYDI--LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA-DKVNIVVRALSGGMKRKLSLGIA 598 (1723)
Q Consensus 522 ~~~r~~ig~~~Q~~~--l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~LSgGqkqrl~lA~a 598 (1723)
...|+.+||+||++. +++ .|++||+.+.....+...++..+++.++++.++|. +..++++.+||||||||++||||
T Consensus 86 ~~~~~~i~~v~q~~~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~~LS~Gq~qrv~lara 164 (289)
T PRK13645 86 KRLRKEIGLVFQFPEYQLFQ-ETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPEDYVKRSPFELSGGQKRRVALAGI 164 (289)
T ss_pred HHHhccEEEEEeCcchhhhh-hHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhcCChhhCCHHHHHHHHHHHH
Confidence 456788999999973 454 59999998866555555556667788999999995 67899999999999999999999
Q ss_pred HhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 599 LIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 599 l~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
|+.+|++|||||||+|||+.+++.++++|+++. .|+|||++||+++++..+||||++|++|++++.|++.++.
T Consensus 165 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 165 IAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPFEIF 239 (289)
T ss_pred HHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999885 3899999999999999999999999999999999887663
No 281
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-41 Score=381.26 Aligned_cols=211 Identities=26% Similarity=0.420 Sum_probs=183.3
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1434 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~~ 1434 (1723)
|+++|++|+|++ +. .|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++..... .++.
T Consensus 1 i~~~~l~~~~~~------~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~-~~~~ 71 (211)
T cd03298 1 VRLDKIRFSYGE------QP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP-ADRP 71 (211)
T ss_pred CEEEeEEEEeCC------Ee--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH-hHcc
Confidence 468999999963 22 39999999999999999999999999999999999999999999999864322 3567
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000284 1435 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1514 (1723)
Q Consensus 1435 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vll 1514 (1723)
+||+||++.+++.+|++||+.+............++++.++++.+++.+..++++.+||||||||++|||||+.+|++||
T Consensus 72 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~ia~al~~~p~lll 151 (211)
T cd03298 72 VSMLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLPGELSGGERQRVALARVLVRDKPVLL 151 (211)
T ss_pred EEEEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999999999864332111112334567889999999988899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000284 1515 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1575 (1723)
Q Consensus 1515 LDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g 1575 (1723)
|||||+|||+.+++.+++.|++++++.| +|||++||+++++..+|||+++|++|++++.|
T Consensus 152 lDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 152 LDEPFAALDPALRAEMLDLVLDLHAETK-MTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999999999864444 68999999999999999999999999998754
No 282
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-41 Score=394.92 Aligned_cols=221 Identities=27% Similarity=0.471 Sum_probs=198.4
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhc
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRK 526 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~ 526 (1723)
..++++|++|.|++. ++.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +....|+
T Consensus 6 ~~l~~~nl~~~~~~~--~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~ 83 (271)
T PRK13632 6 VMIKVENVSFSYPNS--ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRK 83 (271)
T ss_pred eEEEEEeEEEEcCCC--CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhc
Confidence 479999999999631 2469999999999999999999999999999999999999999999999998853 3456778
Q ss_pred ceEEEccCCC-CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcE
Q 000284 527 GLGVCPQYDI-LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 605 (1723)
Q Consensus 527 ~ig~~~Q~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 605 (1723)
.+|||||++. .++.+||+||+.+.....+.+.++.+++++++++.+||.+..++.+.+||||||||++|||||+.+|++
T Consensus 84 ~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~l 163 (271)
T PRK13632 84 KIGIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDKEPQNLSGGQKQRVAIASVLALNPEI 163 (271)
T ss_pred ceEEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 8999999974 677789999998876555566666677889999999999889999999999999999999999999999
Q ss_pred eeccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 606 VILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 606 liLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
|||||||+|||+.+++.++++|++++ + ++|||++||+++++. .|||+++|++|++.+.|++.++.
T Consensus 164 llLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~-~~d~v~~l~~G~i~~~g~~~~~~ 230 (271)
T PRK13632 164 IIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAI-LADKVIVFSEGKLIAQGKPKEIL 230 (271)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHh-hCCEEEEEECCEEEEecCHHHHh
Confidence 99999999999999999999999985 3 589999999999996 79999999999999999876653
No 283
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.2e-41 Score=389.60 Aligned_cols=221 Identities=24% Similarity=0.421 Sum_probs=194.3
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCC--
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIR-- 1425 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p-----~~G~i~i~G~~i~-- 1425 (1723)
.+|+++||+|+|++ +.+++|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|+++.
T Consensus 3 ~~l~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~ 76 (253)
T PRK14267 3 FAIETVNLRVYYGS------NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSP 76 (253)
T ss_pred ceEEEEeEEEEeCC------eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEcccc
Confidence 46899999999953 4599999999999999999999999999999999999987 4999999999985
Q ss_pred C-ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCC--ChhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHH
Q 000284 1426 S-DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGV--AEYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKR 1498 (1723)
Q Consensus 1426 ~-~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~--~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~kq 1498 (1723)
. .....++++||+||++.+++.+|+.||+.+....++. +.+...+.+.++++.+++. +..++++.+|||||||
T Consensus 77 ~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~q 156 (253)
T PRK14267 77 DVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKDRLNDYPSNLSGGQRQ 156 (253)
T ss_pred ccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhhhhccChhhCCHHHHH
Confidence 2 3345677899999999999999999999876554443 2334455677889999884 3578899999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChh
Q 000284 1499 KLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQ 1578 (1723)
Q Consensus 1499 rl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~ 1578 (1723)
|++|||||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+||||++|++|++++.|+++
T Consensus 157 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~-~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 233 (253)
T PRK14267 157 RLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELK-K-E-YTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTR 233 (253)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-h-C-CEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 9999999999999999999999999999999999999985 3 4 58999999999999999999999999999999998
Q ss_pred HHHh
Q 000284 1579 HLKT 1582 (1723)
Q Consensus 1579 ~l~~ 1582 (1723)
++.+
T Consensus 234 ~~~~ 237 (253)
T PRK14267 234 KVFE 237 (253)
T ss_pred HHHh
Confidence 8754
No 284
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-41 Score=391.46 Aligned_cols=219 Identities=28% Similarity=0.423 Sum_probs=193.3
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cH-HHHh
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DM-DEIR 525 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~-~~~r 525 (1723)
..++++|++|.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. +. ...+
T Consensus 4 ~~l~~~~l~~~~~~----~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (255)
T PRK11300 4 PLLSVSGLMMRFGG----LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIAR 79 (255)
T ss_pred ceEEEeeEEEEECC----EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHh
Confidence 36999999999953 469999999999999999999999999999999999999999999999998854 22 2345
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHh-------cCC--------CHHHHHHHHHHHHHHcCCCcccccccCCCChhHH
Q 000284 526 KGLGVCPQYDILFPELTVREHLEMFAVL-------KGV--------KEELLESVVAEMVDEVGLADKVNIVVRALSGGMK 590 (1723)
Q Consensus 526 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~-------~g~--------~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqk 590 (1723)
..++|+||++.+++.+||+||+.+.... ++. ...+..+++.++++.+|+.+..++++++||||||
T Consensus 80 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~ 159 (255)
T PRK11300 80 MGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANRQAGNLAYGQQ 159 (255)
T ss_pred cCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhCChhhCCHHHH
Confidence 6799999999999999999999875321 111 1122345688899999999889999999999999
Q ss_pred HHHHHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHH
Q 000284 591 RKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSL 668 (1723)
Q Consensus 591 qrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~ 668 (1723)
||++||+||+.+|++|||||||+|||+.+++.++++|++++ + |+|||++||+++++..+|||+++|++|++++.|++.
T Consensus 160 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~ 239 (255)
T PRK11300 160 RRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPE 239 (255)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHH
Confidence 99999999999999999999999999999999999999985 3 899999999999999999999999999999999876
Q ss_pred HH
Q 000284 669 FL 670 (1723)
Q Consensus 669 ~L 670 (1723)
++
T Consensus 240 ~~ 241 (255)
T PRK11300 240 EI 241 (255)
T ss_pred HH
Confidence 65
No 285
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-41 Score=393.59 Aligned_cols=225 Identities=27% Similarity=0.380 Sum_probs=198.6
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhc
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAAR 1432 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~~ 1432 (1723)
+|+++|++++|++. ..+.+++|+||+|++||++||+|+||||||||+++|+|+++|++|+|+++|+++.. .....+
T Consensus 4 ~l~~~~l~~~~~~~---~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~ 80 (277)
T PRK13642 4 ILEVENLVFKYEKE---SDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLR 80 (277)
T ss_pred eEEEEEEEEEcCCC---CcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHh
Confidence 68999999999642 12459999999999999999999999999999999999999999999999999864 334567
Q ss_pred cceEEEecCCC-CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000284 1433 RLIGYCPQFDA-LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1511 (1723)
Q Consensus 1433 ~~ig~~pQ~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~ 1511 (1723)
+.+||+||++. .++..|+.||+.+.....+....+..+++.++++.++|.+..++++.+||||||||++|||||+.+|+
T Consensus 81 ~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~lAraL~~~p~ 160 (277)
T PRK13642 81 RKIGMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTREPARLSGGQKQRVAVAGIIALRPE 160 (277)
T ss_pred cceEEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 88999999974 56678999999876554455555556678889999999988999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000284 1512 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1583 (1723)
Q Consensus 1512 vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~ 1583 (1723)
+|||||||+|||+.+++.+++.|++++++.| +|||++||+++++. .||||++|++|++++.|+++++...
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~l~~~~g-~tiil~sH~~~~~~-~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 161 IIILDESTSMLDPTGRQEIMRVIHEIKEKYQ-LTVLSITHDLDEAA-SSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHH-hCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999864434 68999999999997 5999999999999999999887654
No 286
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.9e-41 Score=384.64 Aligned_cols=219 Identities=29% Similarity=0.482 Sum_probs=196.0
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1434 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~~ 1434 (1723)
|+++|+++.|++ + +++|+||+|++||++||+|+||||||||+++|+|+++|++|+|+++|.++..... .++.
T Consensus 1 l~~~~l~~~~~~------~-~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~-~~~~ 72 (235)
T cd03299 1 LKVENLSKDWKE------F-KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP-EKRD 72 (235)
T ss_pred CeeEeEEEEeCC------c-eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh-hHcC
Confidence 468999999952 2 7999999999999999999999999999999999999999999999998865322 3578
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000284 1435 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1514 (1723)
Q Consensus 1435 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vll 1514 (1723)
+||+||++.+++.+|+.||+.+.....+....+..+.+.++++.++|.+..++++.+|||||||||+|||||+.+|++++
T Consensus 73 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~lll 152 (235)
T cd03299 73 ISYVPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRKPETLSGGEQQRVAIARALVVNPKILL 152 (235)
T ss_pred EEEEeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcCcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 99999999999889999999876555555555556677889999999988999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1515 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1515 LDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
|||||+|||+.+++.+++.|++++.+.| +|||++||+++++..+|||+++|++|++++.|+++++.+
T Consensus 153 lDEPt~gLD~~~~~~l~~~l~~~~~~~~-~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 219 (235)
T cd03299 153 LDEPFSALDVRTKEKLREELKKIRKEFG-VTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFK 219 (235)
T ss_pred ECCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHh
Confidence 9999999999999999999999864434 589999999999999999999999999999999887754
No 287
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=8.1e-41 Score=391.81 Aligned_cols=228 Identities=26% Similarity=0.406 Sum_probs=195.9
Q ss_pred eEEEEeEEEEcCCCC---ccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h-
Q 000284 1354 IIYLRNLRKVYPGGK---RSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P- 1428 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~---~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-~- 1428 (1723)
+|+++||+|.|++.. ..+++.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... .
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 589999999996310 00135699999999999999999999999999999999999999999999999988642 2
Q ss_pred --HHhccceEEEecCC--CCCCCCCHHHHHHHHHHH-cCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHH
Q 000284 1429 --KAARRLIGYCPQFD--ALLEYLTVQEHLELYARI-KGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSV 1502 (1723)
Q Consensus 1429 --~~~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~-~g~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~kqrl~i 1502 (1723)
...++.|||+||++ .+++.+|++||+.+.... .+......++++.++++.+++. ...++++.+||||||||++|
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGe~qrv~l 161 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSEDADKLPRQLSGGQLQRINI 161 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhhCChhhCCHHHHHHHHH
Confidence 22467899999996 466789999999765432 2344434456788899999996 67899999999999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1503 AIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1503 A~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
||||+.+|++|||||||+|||+.+++.+++.|++++++.| +|||++||+++++..+|||+++|++|+++..|+++++.+
T Consensus 162 aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 240 (265)
T TIGR02769 162 ARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFG-TAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDVAQLLS 240 (265)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-cEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCHHHHcC
Confidence 9999999999999999999999999999999999864434 689999999999999999999999999999999988754
No 288
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=5.4e-41 Score=393.54 Aligned_cols=225 Identities=28% Similarity=0.390 Sum_probs=198.0
Q ss_pred ceEEEEeEEEEecCcC-----CccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cH
Q 000284 448 RCIQIRKLHKVYATKR-----GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DM 521 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~-----~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~ 521 (1723)
.+|+++||+|.|+.+. +.+.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ..
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~ 82 (267)
T PRK15112 3 TLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDY 82 (267)
T ss_pred ceEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCch
Confidence 4699999999996321 13469999999999999999999999999999999999999999999999998853 33
Q ss_pred HHHhcceEEEccCCC--CCCCCCHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHcCCC-cccccccCCCChhHHHHHHHHH
Q 000284 522 DEIRKGLGVCPQYDI--LFPELTVREHLEMFAVLK-GVKEELLESVVAEMVDEVGLA-DKVNIVVRALSGGMKRKLSLGI 597 (1723)
Q Consensus 522 ~~~r~~ig~~~Q~~~--l~~~lTv~e~l~~~~~~~-g~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~LSgGqkqrl~lA~ 597 (1723)
...++.+||+||++. +++.+|+.|++.+..... +....+.++++.++++.+||. +..++.+.+||||||||++||+
T Consensus 83 ~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~lar 162 (267)
T PRK15112 83 SYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHASYYPHMLAPGQKQRLGLAR 162 (267)
T ss_pred hhHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHhcCchhcCHHHHHHHHHHH
Confidence 344568999999975 678889999998765543 445555667889999999995 6678889999999999999999
Q ss_pred HHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 598 ALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 598 al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
||+.+|++|||||||+|||+.+++.++++|++++ .|+|||++||+++++..+|||+++|++|+++..|++.++..
T Consensus 163 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 239 (267)
T PRK15112 163 ALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGSTADVLA 239 (267)
T ss_pred HHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHhc
Confidence 9999999999999999999999999999999985 38999999999999999999999999999999999877754
No 289
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=5.5e-41 Score=390.74 Aligned_cols=219 Identities=28% Similarity=0.443 Sum_probs=196.7
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc----------
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA---------- 519 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~---------- 519 (1723)
|+++||++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++..
T Consensus 1 i~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~ 76 (252)
T TIGR03005 1 VRFSDVTKRFGI----LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVP 76 (252)
T ss_pred CEEEEEEEEeCC----eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccc
Confidence 468999999953 469999999999999999999999999999999999999999999999988742
Q ss_pred ----cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHH
Q 000284 520 ----DMDEIRKGLGVCPQYDILFPELTVREHLEMFAV-LKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLS 594 (1723)
Q Consensus 520 ----~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~-~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~ 594 (1723)
.....|+.+||++|++.+++.+|+.||+.+... .++....+.++++.++++.+|+.+..++.+.+||||||||++
T Consensus 77 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~ 156 (252)
T TIGR03005 77 ADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKADHMPAQLSGGQQQRVA 156 (252)
T ss_pred cchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhhcChhhcCHHHHHHHH
Confidence 123467889999999999999999999987532 345555666678899999999998889999999999999999
Q ss_pred HHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 595 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 595 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
|||||+.+|+++||||||+|||+.+++.++++|+++. + |+|||++||+++++..+|||+++|++|++++.|++.++.+
T Consensus 157 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 236 (252)
T TIGR03005 157 IARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGKPDEIFR 236 (252)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999999999985 3 8999999999999999999999999999999999877643
No 290
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-41 Score=392.85 Aligned_cols=222 Identities=23% Similarity=0.323 Sum_probs=194.9
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHh
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAA 1431 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~ 1431 (1723)
.+|+++|++|+|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++.. .....
T Consensus 6 ~~l~i~~l~~~~~~------~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~ 79 (265)
T PRK10253 6 ARLRGEQLTLGYGK------YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEV 79 (265)
T ss_pred cEEEEEEEEEEECC------EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHH
Confidence 47999999999963 469999999999999999999999999999999999999999999999998854 33445
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHH-HcC---CChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHh
Q 000284 1432 RRLIGYCPQFDALLEYLTVQEHLELYAR-IKG---VAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMI 1507 (1723)
Q Consensus 1432 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~-~~g---~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~ 1507 (1723)
++.+||+||++.+++.+|++||+.+... ..+ ...+...+.+.++++.+++.+..++++.+||||||||++|||||+
T Consensus 80 ~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~laral~ 159 (265)
T PRK10253 80 ARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLA 159 (265)
T ss_pred hhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCcccCChHHHHHHHHHHHHh
Confidence 6789999999988888999999976421 111 111233456788999999998899999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000284 1508 GDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1581 (1723)
Q Consensus 1508 ~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~ 1581 (1723)
.+|++|||||||+|||+.+++.+++.|++++++.| +|||++||+++++..+|||+++|++|+++..|+++++.
T Consensus 160 ~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~-~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 160 QETAIMLLDEPTTWLDISHQIDLLELLSELNREKG-YTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIV 232 (265)
T ss_pred cCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999999864334 58999999999999999999999999999999988765
No 291
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.1e-41 Score=386.55 Aligned_cols=214 Identities=29% Similarity=0.475 Sum_probs=189.5
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cH-HHHhcc
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DM-DEIRKG 527 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~-~~~r~~ 527 (1723)
|+++||++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. .. ...++.
T Consensus 1 l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 76 (230)
T TIGR03410 1 LEVSNLNVYYGQ----SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAG 76 (230)
T ss_pred CEEEeEEEEeCC----eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhC
Confidence 468999999953 469999999999999999999999999999999999999999999999998753 22 234678
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-CCcccccccCCCChhHHHHHHHHHHHhcCCcEe
Q 000284 528 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVG-LADKVNIVVRALSGGMKRKLSLGIALIGDSKVV 606 (1723)
Q Consensus 528 ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~-l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vl 606 (1723)
+||+||++.+++.+|+.||+.+.....+.. .++.++++++.++ +.+..++++.+||||||||++||+||+.+|+++
T Consensus 77 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~---~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~il 153 (230)
T TIGR03410 77 IAYVPQGREIFPRLTVEENLLTGLAALPRR---SRKIPDEIYELFPVLKEMLGRRGGDLSGGQQQQLAIARALVTRPKLL 153 (230)
T ss_pred eEEeccCCcccCCCcHHHHHHHHHHhcCcc---hHHHHHHHHHHHHhHHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999999999999998875544332 1234577788887 567789999999999999999999999999999
Q ss_pred eccCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHH
Q 000284 607 ILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 670 (1723)
Q Consensus 607 iLDEPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~L 670 (1723)
||||||+|||+.++++++++|+++++ |+|||++||+++++..+||||++|++|++++.|++.++
T Consensus 154 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 154 LLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred EecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 99999999999999999999999863 79999999999999999999999999999999998766
No 292
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-41 Score=390.07 Aligned_cols=220 Identities=26% Similarity=0.429 Sum_probs=196.3
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCC-----CcceEEEccccCCc---c
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA---D 520 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~---~ 520 (1723)
.++++|++|.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.. .
T Consensus 4 ~l~i~~v~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~ 79 (258)
T PRK14241 4 RIDVKDLNIYYGS----FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVD 79 (258)
T ss_pred cEEEeeEEEEECC----EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccC
Confidence 5899999999953 4699999999999999999999999999999999999974 79999999998742 2
Q ss_pred HHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHHH
Q 000284 521 MDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLSL 595 (1723)
Q Consensus 521 ~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~v~~~l~~~~l~----~~~~~~~~~LSgGqkqrl~l 595 (1723)
....|+.+||++|++.+++.+||+||+.+.....+. +.+..+++++++++.+|+. +..++.+.+||||||||++|
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~l 159 (258)
T PRK14241 80 PVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKDRLDKPGGGLSGGQQQRLCI 159 (258)
T ss_pred hHHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHHHHHHHH
Confidence 345678899999999999999999999887655443 4455667889999999984 46788999999999999999
Q ss_pred HHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEe------CCEEEEecCHHH
Q 000284 596 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMA------NGSLKCCGSSLF 669 (1723)
Q Consensus 596 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~------~G~l~~~Gs~~~ 669 (1723)
||||+.+|+++||||||+|||+.+++.++++|+++++++|||++||+++++..+||||++|+ +|++++.|++.+
T Consensus 160 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~~~~~~ 239 (258)
T PRK14241 160 ARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEIDDTEK 239 (258)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEecCCHHH
Confidence 99999999999999999999999999999999999777999999999999999999999997 899999999877
Q ss_pred HHh
Q 000284 670 LKH 672 (1723)
Q Consensus 670 Lk~ 672 (1723)
+..
T Consensus 240 ~~~ 242 (258)
T PRK14241 240 IFS 242 (258)
T ss_pred HHh
Confidence 643
No 293
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=7.2e-41 Score=392.25 Aligned_cols=224 Identities=25% Similarity=0.417 Sum_probs=196.7
Q ss_pred eEEEEeEEEEecCcC-----CccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-c--
Q 000284 449 CIQIRKLHKVYATKR-----GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-D-- 520 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~-----~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~-- 520 (1723)
+|+++||+|.|+... +++.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. .
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 588999999996321 13579999999999999999999999999999999999999999999999998753 1
Q ss_pred -HHHHhcceEEEccCC--CCCCCCCHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHcCCC-cccccccCCCChhHHHHHHH
Q 000284 521 -MDEIRKGLGVCPQYD--ILFPELTVREHLEMFAVL-KGVKEELLESVVAEMVDEVGLA-DKVNIVVRALSGGMKRKLSL 595 (1723)
Q Consensus 521 -~~~~r~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~-~g~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~LSgGqkqrl~l 595 (1723)
....|+.+||+||++ .+++.+||+||+.+.... .+...+..++++.++++.+|+. ...++++.+||||||||++|
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGe~qrv~l 161 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSEDADKLPRQLSGGQLQRINI 161 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhhCChhhCCHHHHHHHHH
Confidence 223577899999997 467789999999875432 3444445567889999999996 67899999999999999999
Q ss_pred HHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 596 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 596 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
||||+.+|++|||||||+|||+.+++.++++|++++ + |+|||++||+++++..+|||+++|++|+++..|++.++.+
T Consensus 162 aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 240 (265)
T TIGR02769 162 ARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDVAQLLS 240 (265)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCHHHHcC
Confidence 999999999999999999999999999999999985 3 8999999999999999999999999999999999877753
No 294
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-41 Score=396.13 Aligned_cols=226 Identities=25% Similarity=0.370 Sum_probs=194.2
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC------C
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS------D 1427 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~------~ 1427 (1723)
.|+++|++|+|++... ....+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .
T Consensus 6 ~l~i~nl~~~~~~~~~-~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 6 DIILDNVSYTYAKKTP-FEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred eEEEEEEEEEeCCCCc-cccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 4899999999964210 01359999999999999999999999999999999999999999999999998742 2
Q ss_pred hHHhccceEEEecCCC--CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHH
Q 000284 1428 PKAARRLIGYCPQFDA--LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAI 1504 (1723)
Q Consensus 1428 ~~~~~~~ig~~pQ~~~--l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~kqrl~iA~ 1504 (1723)
....++.|||+||++. +++ .|++||+.+.....+....+..+.+.++++.++|. +..++++.+||||||||++|||
T Consensus 85 ~~~~~~~i~~v~q~~~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~~LS~Gq~qrv~lar 163 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQLFQ-ETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPEDYVKRSPFELSGGQKRRVALAG 163 (289)
T ss_pred HHHHhccEEEEEeCcchhhhh-hHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhcCChhhCCHHHHHHHHHHH
Confidence 3456778999999963 444 69999998765444554444556678899999994 6789999999999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1505 AMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1505 al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
||+.+|++|||||||+|||+.+++.+++.|+++.++.| +|||++||+++++..+|||+++|++|++++.|+++++.+
T Consensus 164 al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 240 (289)
T PRK13645 164 IIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYK-KRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPFEIFS 240 (289)
T ss_pred HHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999864434 689999999999999999999999999999999988753
No 295
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.6e-41 Score=383.74 Aligned_cols=220 Identities=33% Similarity=0.522 Sum_probs=197.2
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1434 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~~ 1434 (1723)
|+++|++++|++ +.+++++||++++||++||+|+||||||||+++|+|+++|++|+|.++|+++..... .++.
T Consensus 1 l~~~~l~~~~~~------~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~-~~~~ 73 (232)
T cd03300 1 IELENVSKFYGG------FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP-HKRP 73 (232)
T ss_pred CEEEeEEEEeCC------eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh-hhcc
Confidence 468999999953 469999999999999999999999999999999999999999999999998865332 3578
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000284 1435 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1514 (1723)
Q Consensus 1435 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vll 1514 (1723)
+||+||++.+++.+|++||+.+....++......++.+.++++.+++.+..++.+.+||||||||++|||||+.+|+++|
T Consensus 74 i~~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~lll 153 (232)
T cd03300 74 VNTVFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKPSQLSGGQQQRVAIARALVNEPKVLL 153 (232)
T ss_pred eEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999998889999999876655555555556677889999999988999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1515 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1515 LDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
|||||+|||+.+++.+++.|++++++.| +|||++||+++++..+|||+++|++|++++.|+++++..
T Consensus 154 lDEP~~gLD~~~~~~l~~~l~~~~~~~~-~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~ 220 (232)
T cd03300 154 LDEPLGALDLKLRKDMQLELKRLQKELG-ITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYE 220 (232)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHh
Confidence 9999999999999999999999864334 589999999999999999999999999999999887764
No 296
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-41 Score=390.26 Aligned_cols=220 Identities=31% Similarity=0.492 Sum_probs=196.3
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCC--C---CcceEEEccccCCc---
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP--P---TTGDALVFGKNITA--- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~--p---~~G~i~i~g~~i~~--- 519 (1723)
+.|+++|++|.|+. +.+++|+||+|++||+++|+|+||||||||+++|+|+++ | ++|+|+++|.++..
T Consensus 11 ~~l~i~~l~~~~~~----~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~ 86 (259)
T PRK14274 11 EVYQINGMNLWYGQ----HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKV 86 (259)
T ss_pred ceEEEeeEEEEECC----eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEcccccc
Confidence 57999999999953 469999999999999999999999999999999999997 3 69999999998752
Q ss_pred cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCCc----ccccccCCCChhHHHHHH
Q 000284 520 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGLAD----KVNIVVRALSGGMKRKLS 594 (1723)
Q Consensus 520 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~v~~~l~~~~l~~----~~~~~~~~LSgGqkqrl~ 594 (1723)
+....|+.+||+||++.+++. |++||+.+.....+. ..++.+++++++++.+++.+ ..++.+.+||||||||++
T Consensus 87 ~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LS~Gq~qrv~ 165 (259)
T PRK14274 87 DLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKDRLHTQALSLSGGQQQRLC 165 (259)
T ss_pred CHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhhhhCCcccCCHHHHHHHH
Confidence 334567889999999988886 999999887655553 34555677889999999853 468899999999999999
Q ss_pred HHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 595 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 595 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
|||||+.+|+++||||||+|||+.+++.++++|+++++++|||++||+++++..+|||+++|++|++++.|++.++.+
T Consensus 166 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 243 (259)
T PRK14274 166 IARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKMFS 243 (259)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHHhh
Confidence 999999999999999999999999999999999999878999999999999999999999999999999999887643
No 297
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-41 Score=386.82 Aligned_cols=217 Identities=28% Similarity=0.407 Sum_probs=191.9
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhc
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAAR 1432 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~~ 1432 (1723)
.|+++|++|+|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .....+
T Consensus 3 ~l~~~~l~~~~~~------~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 76 (241)
T PRK14250 3 EIEFKEVSYSSFG------KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLR 76 (241)
T ss_pred eEEEEeEEEEeCC------eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhh
Confidence 5899999999953 459999999999999999999999999999999999999999999999998854 334567
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000284 1433 RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1511 (1723)
Q Consensus 1433 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~kqrl~iA~al~~~p~ 1511 (1723)
+.+||+||++.+++ .|++||+.+....++. ..+++.++++.+++. +..++++.+||||||||++||+||+.+|+
T Consensus 77 ~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~~----~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 151 (241)
T PRK14250 77 RKIGMVFQQPHLFE-GTVKDNIEYGPMLKGE----KNVDVEYYLSIVGLNKEYATRDVKNLSGGEAQRVSIARTLANNPE 151 (241)
T ss_pred hcEEEEecCchhch-hhHHHHHhcchhhcCc----HHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCC
Confidence 78999999998886 6999999865433321 234577889999996 57889999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1512 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1512 vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
+|||||||+|||+.+++.+++.|++++++.| +|||++||+++++..+||||++|++|+++..|+++++..
T Consensus 152 llllDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (241)
T PRK14250 152 VLLLDEPTSALDPTSTEIIEELIVKLKNKMN-LTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFT 221 (241)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhCC-CEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhc
Confidence 9999999999999999999999999864345 589999999999999999999999999999999988754
No 298
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-42 Score=352.15 Aligned_cols=220 Identities=24% Similarity=0.418 Sum_probs=204.9
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc--------
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-------- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-------- 519 (1723)
..++++||.|.|+ ...+|+++||+-++|+++.|+|.+||||||++++|.=+..|+.|.|.++|.+++.
T Consensus 5 ~~l~v~dlHK~~G----~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l 80 (256)
T COG4598 5 NALEVEDLHKRYG----EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQL 80 (256)
T ss_pred cceehhHHHhhcc----cchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCe
Confidence 4689999999995 4569999999999999999999999999999999999999999999999998741
Q ss_pred ------cHHHHhcceEEEccCCCCCCCCCHHHHHHH-HHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHH
Q 000284 520 ------DMDEIRKGLGVCPQYDILFPELTVREHLEM-FAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRK 592 (1723)
Q Consensus 520 ------~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~-~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqr 592 (1723)
+...+|.++|+|+|+..||.+|||.||+.- ....-|.++.++.++++.+|.++|+.++.+.++..|||||+||
T Consensus 81 ~~ad~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~Ae~~L~kVGi~ek~~~YP~~LSGGQQQR 160 (256)
T COG4598 81 KPADKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAIERAEKYLAKVGIAEKADAYPAHLSGGQQQR 160 (256)
T ss_pred eeCCHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHHHHHHHHHHHhCchhhhhcCccccCchHHHH
Confidence 245688899999999999999999999753 4456689999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 593 LSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 593 l~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
++|||||+.+|+++++|||||+|||+-.-++...++++. +|||++++||.|.+|..++..|+.+++|++-+.|+|+++-
T Consensus 161 ~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iEE~G~P~qvf 240 (256)
T COG4598 161 VAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIEEEGPPEQVF 240 (256)
T ss_pred HHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceecccCChHHHh
Confidence 999999999999999999999999999999999999996 6999999999999999999999999999999999997763
No 299
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=387.68 Aligned_cols=220 Identities=21% Similarity=0.344 Sum_probs=194.2
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCCC-C
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIRS-D 1427 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p-----~~G~i~i~G~~i~~-~ 1427 (1723)
+++++|++|+|++ +.+++|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++.. .
T Consensus 3 ~l~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~ 76 (250)
T PRK14247 3 KIEIRDLKVSFGQ------VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMD 76 (250)
T ss_pred eEEEEeeEEEECC------eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCC
Confidence 5899999999963 4599999999999999999999999999999999999974 79999999999864 3
Q ss_pred hHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCC--ChhhHHHHHHHHHHHcCCcc----ccCCCCCCCChhHHHHHH
Q 000284 1428 PKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGV--AEYRMDDVVMEKLVEFDLLK----HAKKPSFTLSGGNKRKLS 1501 (1723)
Q Consensus 1428 ~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~--~~~~~~~~~~~~l~~~~l~~----~~~~~~~~LSgG~kqrl~ 1501 (1723)
....++.|||+||++.+++.+|++||+.+.....+. +..+..+.+.++++.+++.+ ..++++.+||||||||++
T Consensus 77 ~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~ 156 (250)
T PRK14247 77 VIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVKDRLDAPAGKLSGGQQQRLC 156 (250)
T ss_pred HHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchhhhhcCCcccCCHHHHHHHH
Confidence 445677899999999888889999999876544332 23344567788999999853 578999999999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000284 1502 VAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1581 (1723)
Q Consensus 1502 iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~ 1581 (1723)
|||||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|++|++++.|+++++.
T Consensus 157 laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~-~-~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 157 IARALAFQPEVLLADEPTANLDPENTAKIESLFLELK-K-D-MTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVF 233 (250)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-c-C-CEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHH
Confidence 9999999999999999999999999999999999984 3 4 58999999999999999999999999999999998875
Q ss_pred h
Q 000284 1582 T 1582 (1723)
Q Consensus 1582 ~ 1582 (1723)
+
T Consensus 234 ~ 234 (250)
T PRK14247 234 T 234 (250)
T ss_pred c
Confidence 4
No 300
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-41 Score=390.26 Aligned_cols=220 Identities=27% Similarity=0.406 Sum_probs=197.0
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCC-----CCcceEEEccccCCc---
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA--- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~--- 519 (1723)
..++++|++|.|++ +.+++|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++..
T Consensus 12 ~~l~~~~l~~~~~~----~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~ 87 (260)
T PRK10744 12 SKIQVRNLNFYYGK----FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQ 87 (260)
T ss_pred ceEEEEEEEEEeCC----eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcccccc
Confidence 46999999999953 369999999999999999999999999999999999986 589999999998752
Q ss_pred cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHH
Q 000284 520 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLK-GVKEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLS 594 (1723)
Q Consensus 520 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~-g~~~~~~~~~v~~~l~~~~l~----~~~~~~~~~LSgGqkqrl~ 594 (1723)
+....|+++||+||++.+++ .|++||+.+..... +.+.++.+++++++++.+++. +..++.+.+||||||||++
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~ 166 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKDKLHQSGYSLSGGQQQRLC 166 (260)
T ss_pred chHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHHHHhcCCCCCCHHHHHHHH
Confidence 34466789999999998887 79999998865543 456666677899999999984 4568889999999999999
Q ss_pred HHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 595 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 595 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
|||||+.+|++|||||||+|||+.+++.+.++|+++++++|||++||+++++..+|||+++|++|+++..|++.++..
T Consensus 167 laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 244 (260)
T PRK10744 167 IARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDTIFT 244 (260)
T ss_pred HHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 999999999999999999999999999999999999778899999999999999999999999999999999877643
No 301
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-41 Score=384.71 Aligned_cols=219 Identities=23% Similarity=0.397 Sum_probs=190.6
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1433 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~ 1433 (1723)
+++++||+|+|++ + ..++||++++||++||+||||||||||+++|+|+++|++|+|.++|+++..... .++
T Consensus 1 ~l~~~~l~~~~~~------~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~-~~~ 71 (232)
T PRK10771 1 MLKLTDITWLYHH------L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP-SRR 71 (232)
T ss_pred CeEEEEEEEEECC------c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh-hhc
Confidence 4789999999963 1 238999999999999999999999999999999999999999999998764322 356
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000284 1434 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1513 (1723)
Q Consensus 1434 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vl 1513 (1723)
.+||+||++.+++.+|+.||+.+.........+..++++.++++.+++.+..++++.+||||||||++||+||+.+|++|
T Consensus 72 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~ll 151 (232)
T PRK10771 72 PVSMLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLPGQLSGGQRQRVALARCLVREQPIL 151 (232)
T ss_pred cEEEEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCcccCCHHHHHHHHHHHHHhcCCCEE
Confidence 79999999999998999999976432111112233556888999999998899999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1514 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1514 lLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
||||||+|||+.+++.+++.|+++.++.| +|||++||+++++..+|||+++|++|++++.|+++++.+
T Consensus 152 lLDEP~~gLD~~~~~~~~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~ 219 (232)
T PRK10771 152 LLDEPFSALDPALRQEMLTLVSQVCQERQ-LTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLS 219 (232)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999864434 589999999999999999999999999999999888764
No 302
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-41 Score=392.89 Aligned_cols=222 Identities=24% Similarity=0.393 Sum_probs=199.8
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhc
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRK 526 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~ 526 (1723)
+.++++|++|.|++. .+.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +....|+
T Consensus 6 ~~l~i~~l~~~~~~~--~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 83 (269)
T PRK13648 6 SIIVFKNVSFQYQSD--ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRK 83 (269)
T ss_pred ceEEEEEEEEEcCCC--CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHh
Confidence 479999999999642 2359999999999999999999999999999999999999999999999998853 4456778
Q ss_pred ceEEEccCCC-CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcE
Q 000284 527 GLGVCPQYDI-LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 605 (1723)
Q Consensus 527 ~ig~~~Q~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 605 (1723)
.+|||||++. +++..|+.+|+.+.....+.+.+...++++++++.+|+.+..++.+.+||||||||++|||||+.+|++
T Consensus 84 ~i~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~l 163 (269)
T PRK13648 84 HIGIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERADYEPNALSGGQKQRVAIAGVLALNPSV 163 (269)
T ss_pred heeEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhhCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 8999999985 677889999998876655666666677889999999999889999999999999999999999999999
Q ss_pred eeccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 606 VILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 606 liLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
+||||||+|||+.+++.++++|++++ + |+|||++||+++++.. ||||++|++|++++.|++.++..
T Consensus 164 llLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~~~~ 231 (269)
T PRK13648 164 IILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAME-ADHVIVMNKGTVYKEGTPTEIFD 231 (269)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhc-CCEEEEEECCEEEEecCHHHHhc
Confidence 99999999999999999999999985 3 8999999999999986 99999999999999999877643
No 303
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-40 Score=388.03 Aligned_cols=221 Identities=24% Similarity=0.400 Sum_probs=192.9
Q ss_pred cceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeCCC
Q 000284 1352 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDIRS 1426 (1723)
Q Consensus 1352 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~-----p~~G~i~i~G~~i~~ 1426 (1723)
.++|+++|++++|++ +.+++++||+|++||++||+||||||||||+++|+|+.+ |++|+|.++|+++..
T Consensus 4 ~~~l~~~~l~~~~~~------~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~ 77 (253)
T PRK14242 4 PPKMEARGLSFFYGD------FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYD 77 (253)
T ss_pred CcEEEEeeeEEEECC------eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccc
Confidence 367999999999953 459999999999999999999999999999999999974 689999999998853
Q ss_pred ---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCC-hhhHHHHHHHHHHHcCCcc----ccCCCCCCCChhHHH
Q 000284 1427 ---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVA-EYRMDDVVMEKLVEFDLLK----HAKKPSFTLSGGNKR 1498 (1723)
Q Consensus 1427 ---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~~~~~l~~~~l~~----~~~~~~~~LSgG~kq 1498 (1723)
.....++++||+||++.+++ .|++||+.+....++.. .+..++++.++++.+++.+ ..++++.+|||||||
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~q 156 (253)
T PRK14242 78 PHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKDRLHESALGLSGGQQQ 156 (253)
T ss_pred cccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHH
Confidence 23345778999999998887 59999998765555542 2334567788899999853 468899999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChh
Q 000284 1499 KLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQ 1578 (1723)
Q Consensus 1499 rl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~ 1578 (1723)
||+|||||+.+|++|||||||+|||+.+++.+++.|+++. + + +|||++||+++++..+||||++|++|++++.|+++
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 233 (253)
T PRK14242 157 RLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK-A-R-YTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTE 233 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-c-C-CeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 9999999999999999999999999999999999999984 3 4 58999999999999999999999999999999998
Q ss_pred HHHh
Q 000284 1579 HLKT 1582 (1723)
Q Consensus 1579 ~l~~ 1582 (1723)
++.+
T Consensus 234 ~~~~ 237 (253)
T PRK14242 234 QIFT 237 (253)
T ss_pred HHHc
Confidence 8754
No 304
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.5e-41 Score=384.64 Aligned_cols=218 Identities=30% Similarity=0.473 Sum_probs=198.5
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcceE
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 529 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 529 (1723)
|+++||++.|+. +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|+++|.++.... ..++.+|
T Consensus 1 l~~~~l~~~~~~----~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~-~~~~~i~ 75 (232)
T cd03300 1 IELENVSKFYGG----FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLP-PHKRPVN 75 (232)
T ss_pred CEEEeEEEEeCC----eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCC-hhhcceE
Confidence 468999999953 46999999999999999999999999999999999999999999999999875422 2367899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeecc
Q 000284 530 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 609 (1723)
Q Consensus 530 ~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 609 (1723)
||||++.+++.+|+.||+.+.....+.+....+++++++++.+|+.+..++.+.+||||||||++|||||+.+|+++|||
T Consensus 76 ~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~llllD 155 (232)
T cd03300 76 TVFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKPSQLSGGQQQRVAIARALVNEPKVLLLD 155 (232)
T ss_pred EEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999999999999988766666666666778899999999998899999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 610 EPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 610 EPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
|||+|||+.+++.++++|+++++ |+|||++||+++++..+|||+++|++|++.+.|++.++.+
T Consensus 156 EP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~ 220 (232)
T cd03300 156 EPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYE 220 (232)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHh
Confidence 99999999999999999999863 8999999999999999999999999999999998876654
No 305
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.3e-41 Score=381.19 Aligned_cols=209 Identities=25% Similarity=0.412 Sum_probs=183.9
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcceE
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 529 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 529 (1723)
|+++|++|.|++ +. .|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.... ..++.+|
T Consensus 1 i~~~~l~~~~~~----~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~-~~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYGE----QP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAP-PADRPVS 73 (211)
T ss_pred CEEEeEEEEeCC----Ee--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCC-HhHccEE
Confidence 468999999953 22 3999999999999999999999999999999999999999999999875322 2357899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeecc
Q 000284 530 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 609 (1723)
Q Consensus 530 ~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 609 (1723)
|+||++.+++.+|++||+.+.........++.++++.++++.+|+.+..++++.+||||||||++|||||+.+|+++|||
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~ia~al~~~p~llllD 153 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLPGELSGGERQRVALARVLVRDKPVLLLD 153 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999999999999987543211112334567899999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEec
Q 000284 610 EPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 665 (1723)
Q Consensus 610 EPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~G 665 (1723)
|||+|||+.+++.++++|++++ .|+|||++||+++++..+||||++|++|++++.|
T Consensus 154 EP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 154 EPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999999985 3899999999999999999999999999998654
No 306
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=400.85 Aligned_cols=228 Identities=21% Similarity=0.304 Sum_probs=193.6
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC----CCceEEEEcCeeCCC-C
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY----PTDGTAFIFGKDIRS-D 1427 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~----p~~G~i~i~G~~i~~-~ 1427 (1723)
++|+++||+|.|+... +...+|+||||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|+++.. .
T Consensus 2 ~~L~v~~l~~~y~~~~--~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~ 79 (330)
T PRK15093 2 PLLDIRNLTIEFKTSD--GWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLS 79 (330)
T ss_pred CeEEEeeeEEEEeCCC--CCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCC
Confidence 3689999999996421 23569999999999999999999999999999999999997 589999999999864 2
Q ss_pred hHH----hccceEEEecCCC--CCCCCCHHHHHHHHHHH---cCC---ChhhHHHHHHHHHHHcCCcc---ccCCCCCCC
Q 000284 1428 PKA----ARRLIGYCPQFDA--LLEYLTVQEHLELYARI---KGV---AEYRMDDVVMEKLVEFDLLK---HAKKPSFTL 1492 (1723)
Q Consensus 1428 ~~~----~~~~ig~~pQ~~~--l~~~lTv~e~l~~~~~~---~g~---~~~~~~~~~~~~l~~~~l~~---~~~~~~~~L 1492 (1723)
... .++.|||+||++. +.+.+|+.+++...... .+. ...+.++++.++|+.++|.+ ..++++.+|
T Consensus 80 ~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~p~~L 159 (330)
T PRK15093 80 PRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYEL 159 (330)
T ss_pred HHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhCCchhC
Confidence 222 2357999999974 67889999999753221 121 11234567889999999974 468999999
Q ss_pred ChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEE
Q 000284 1493 SGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLR 1572 (1723)
Q Consensus 1493 SgG~kqrl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~ 1572 (1723)
||||||||+||+||+.+|++|||||||+|||+.+++.++++|+++.++.| .|||++|||++++..+||||++|.+|+++
T Consensus 160 SgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g-~tii~itHdl~~v~~~~dri~vm~~G~iv 238 (330)
T PRK15093 160 TEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNN-TTILLISHDLQMLSQWADKINVLYCGQTV 238 (330)
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcC-CEEEEEECCHHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999999965444 68999999999999999999999999999
Q ss_pred EecChhHHHhh
Q 000284 1573 CIGSPQHLKTR 1583 (1723)
Q Consensus 1573 ~~g~~~~l~~~ 1583 (1723)
+.|+++++.+.
T Consensus 239 e~g~~~~i~~~ 249 (330)
T PRK15093 239 ETAPSKELVTT 249 (330)
T ss_pred EECCHHHHHhC
Confidence 99999888653
No 307
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-40 Score=386.88 Aligned_cols=219 Identities=28% Similarity=0.422 Sum_probs=195.4
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCC---CCcceEEEccccCCc-cHHHH
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP---PTTGDALVFGKNITA-DMDEI 524 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~---p~~G~i~i~g~~i~~-~~~~~ 524 (1723)
.|+++|+++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++.. +....
T Consensus 2 ~~~~~~l~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~ 77 (246)
T PRK14269 2 IAKTTNLNLFYGK----KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVAL 77 (246)
T ss_pred ceeeeeeEEEECC----EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHH
Confidence 4789999999953 469999999999999999999999999999999999984 799999999998854 34566
Q ss_pred hcceEEEccCCCCCCCCCHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHHHHHH
Q 000284 525 RKGLGVCPQYDILFPELTVREHLEMFAVLKGV--KEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLSLGIA 598 (1723)
Q Consensus 525 r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~--~~~~~~~~v~~~l~~~~l~----~~~~~~~~~LSgGqkqrl~lA~a 598 (1723)
|+.+||+||++.+|+ .|++||+.++...++. ..+..++++.++++.+++. +..++.+.+||||||||++||||
T Consensus 78 ~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~lara 156 (246)
T PRK14269 78 RKNVGMVFQQPNVFV-KSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLKQNALALSGGQQQRLCIARA 156 (246)
T ss_pred hhhEEEEecCCcccc-ccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHHhcCCcccCCHHHHHHHHHHHH
Confidence 788999999999987 6999999987655543 2244566788999999995 34688899999999999999999
Q ss_pred HhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 599 LIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 599 l~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
|+.+|+++||||||+|||+.+++.+.+.|+++++++|||++||+++++..+||||++|++|+++..|++.++..
T Consensus 157 l~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 230 (246)
T PRK14269 157 LAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFE 230 (246)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999999998778999999999999999999999999999999999877643
No 308
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2.7e-41 Score=383.45 Aligned_cols=205 Identities=29% Similarity=0.489 Sum_probs=180.2
Q ss_pred EEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcceEEE
Q 000284 452 IRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLGVC 531 (1723)
Q Consensus 452 i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig~~ 531 (1723)
++||+|.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++. ..++.+||+
T Consensus 2 ~~~l~~~~~~----~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~----~~~~~i~~v 73 (213)
T cd03235 2 VEDLTVSYGG----HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE----KERKRIGYV 73 (213)
T ss_pred cccceeEECC----EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH----HHHhheEEe
Confidence 6799999953 46999999999999999999999999999999999999999999999998764 356789999
Q ss_pred ccCCCCC--CCCCHHHHHHHHHHhcC----CCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcE
Q 000284 532 PQYDILF--PELTVREHLEMFAVLKG----VKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 605 (1723)
Q Consensus 532 ~Q~~~l~--~~lTv~e~l~~~~~~~g----~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 605 (1723)
||++.++ ..+||+||+.+.....+ ...+..+++++++++.+|+.+..++++.+||||||||++|||||+.+|++
T Consensus 74 ~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~l 153 (213)
T cd03235 74 PQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQIGELSGGQQQRVLLARALVQDPDL 153 (213)
T ss_pred ccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 9998763 34799999987543211 12234556789999999999888999999999999999999999999999
Q ss_pred eeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEec
Q 000284 606 VILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 665 (1723)
Q Consensus 606 liLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~G 665 (1723)
+||||||+|||+.+++.+++.|++++ +|+|||++||+++++..+||||++|++| +++.|
T Consensus 154 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 154 LLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999999999999999999986 6899999999999999999999999886 54443
No 309
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-41 Score=393.50 Aligned_cols=222 Identities=26% Similarity=0.362 Sum_probs=199.3
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhcc
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 527 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 527 (1723)
.++++||++.|+++. ...+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|+++|.++.. .....++.
T Consensus 4 ~l~~~~l~~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 82 (277)
T PRK13642 4 ILEVENLVFKYEKES-DVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRK 82 (277)
T ss_pred eEEEEEEEEEcCCCC-cCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcc
Confidence 689999999996421 2459999999999999999999999999999999999999999999999998853 34466789
Q ss_pred eEEEccCCC-CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEe
Q 000284 528 LGVCPQYDI-LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVV 606 (1723)
Q Consensus 528 ig~~~Q~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vl 606 (1723)
+||+||++. +++..||.||+.+.....+...++..++++++++.+||.+..++++.+||||||||++|||||+.+|+++
T Consensus 83 i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~lAraL~~~p~ll 162 (277)
T PRK13642 83 IGMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTREPARLSGGQKQRVAVAGIIALRPEII 162 (277)
T ss_pred eEEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 999999974 5677899999987665556666666778899999999998899999999999999999999999999999
Q ss_pred eccCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 607 ILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 607 iLDEPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
||||||+|||+.+++.++++|+++.+ |+|||++||+++++. .||||++|++|++++.|++.++..
T Consensus 163 llDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~-~~d~i~~l~~G~i~~~g~~~~~~~ 229 (277)
T PRK13642 163 ILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAA-SSDRILVMKAGEIIKEAAPSELFA 229 (277)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHH-hCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999853 899999999999997 599999999999999999877654
No 310
>COG4586 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3.1e-41 Score=369.22 Aligned_cols=237 Identities=29% Similarity=0.437 Sum_probs=215.7
Q ss_pred eEEEEeEEEEecC-----------------cCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEE
Q 000284 449 CIQIRKLHKVYAT-----------------KRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDAL 511 (1723)
Q Consensus 449 ~i~i~~l~k~y~~-----------------~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~ 511 (1723)
+|.++||+|.|.- +.....||+|+||+|++|++++++|+||||||||+|||+|++.|++|.|.
T Consensus 3 ~i~~~~l~k~~~~~~k~pgl~g~l~~~~~~k~~~~~AVqdisf~IP~G~ivgflGaNGAGKSTtLKmLTGll~p~~G~v~ 82 (325)
T COG4586 3 MIMVENLSKNYPVAIKEPGLKGSLNHFFHRKERSIEAVQDISFEIPKGEIVGFLGANGAGKSTTLKMLTGLLLPTSGKVR 82 (325)
T ss_pred eeEecccccccceeeeCchhHHHHHhhcCchhhhhhhhheeeeecCCCcEEEEEcCCCCcchhhHHHHhCccccCCCeEE
Confidence 5667777777742 12235699999999999999999999999999999999999999999999
Q ss_pred EccccCCccHHHHhcceEEEc-cCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHH
Q 000284 512 VFGKNITADMDEIRKGLGVCP-QYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMK 590 (1723)
Q Consensus 512 i~g~~i~~~~~~~r~~ig~~~-Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqk 590 (1723)
|+|++...+.++.-+++|+|. |.-.+|.++-+.|-+.....++.++.++.+++.+.+.+.++|+...+.+++.||-|||
T Consensus 83 V~G~~Pf~~~~~~~~~~~~v~gqk~ql~Wdlp~~ds~~v~~~Iy~Ipd~~F~~r~~~l~eiLdl~~~lk~~vr~LSlGqR 162 (325)
T COG4586 83 VNGKDPFRRREEYLRSIGLVMGQKLQLWWDLPALDSLEVLKLIYEIPDDEFAERLDFLTEILDLEGFLKWPVRKLSLGQR 162 (325)
T ss_pred ecCcCcchhHHHHHHHHHHHhhhhheeeeechhhhhHHHHHHHHhCCHHHHHHHHHHHHHHhcchhhhhhhhhhccchHH
Confidence 999998776666667788875 7777888888999999988899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHH
Q 000284 591 RKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSL 668 (1723)
Q Consensus 591 qrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~ 668 (1723)
+|+.||.||+++|+||+|||||-|||..++..+.++|+++. .+.||++|||+|+.+..+||||+.|++|+++..|+..
T Consensus 163 mraeLaaaLLh~p~VLfLDEpTvgLDV~aq~~ir~Flke~n~~~~aTVllTTH~~~di~~lc~rv~~I~~Gqlv~dg~l~ 242 (325)
T COG4586 163 MRAELAAALLHPPKVLFLDEPTVGLDVNAQANIREFLKEYNEERQATVLLTTHIFDDIATLCDRVLLIDQGQLVFDGTLA 242 (325)
T ss_pred HHHHHHHHhcCCCcEEEecCCccCcchhHHHHHHHHHHHHHHhhCceEEEEecchhhHHHhhhheEEeeCCcEeecccHH
Confidence 99999999999999999999999999999999999999985 4899999999999999999999999999999999999
Q ss_pred HHHhhhCCcEEEEEEec
Q 000284 669 FLKHQYGVGYTLTLVKS 685 (1723)
Q Consensus 669 ~Lk~~~g~gy~l~~~~~ 685 (1723)
.|+.+||..-.+.+...
T Consensus 243 ~l~~~f~~~k~~~~el~ 259 (325)
T COG4586 243 QLQEQFGPYKEFSVELK 259 (325)
T ss_pred HHHHHhCCceEEEEEEc
Confidence 99999999877776654
No 311
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-40 Score=387.71 Aligned_cols=220 Identities=26% Similarity=0.431 Sum_probs=196.0
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCC--C---CcceEEEccccCCc---c
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP--P---TTGDALVFGKNITA---D 520 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~--p---~~G~i~i~g~~i~~---~ 520 (1723)
.|+++|++|.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|+++.. .
T Consensus 4 ~l~~~nl~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 4 KVKLEQLNVHFGK----NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred EEEEEEEEEEeCC----eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 5899999999953 469999999999999999999999999999999999986 4 69999999998853 2
Q ss_pred HHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHcCCCc----ccccccCCCChhHHHHHHH
Q 000284 521 MDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKG-VKEELLESVVAEMVDEVGLAD----KVNIVVRALSGGMKRKLSL 595 (1723)
Q Consensus 521 ~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g-~~~~~~~~~v~~~l~~~~l~~----~~~~~~~~LSgGqkqrl~l 595 (1723)
....|+.+||+||++.+++.+|+.||+.+.....+ .+..+.+++++++++.+++.. ..++.+.+||||||||++|
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrl~l 159 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDRLKSNAMELSGGQQQRLCI 159 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcCcCCHHHHHHHHH
Confidence 34567889999999999999999999987655444 234455677899999999853 4578899999999999999
Q ss_pred HHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 596 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 596 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
||||+.+|++|||||||+|||+.++++++++|+++++++|||++||+++++..+|||+++|++|++++.|++.++..
T Consensus 160 aral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 236 (252)
T PRK14256 160 ARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETKKIFT 236 (252)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999877899999999999999999999999999999999877654
No 312
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-41 Score=405.04 Aligned_cols=214 Identities=21% Similarity=0.366 Sum_probs=190.3
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-----h
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-----P 1428 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-----~ 1428 (1723)
||++ ||+|+|++ + .+ |+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++... .
T Consensus 1 ~l~~-~l~k~~~~------~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~ 71 (352)
T PRK11144 1 MLEL-NFKQQLGD------L-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICL 71 (352)
T ss_pred CeEE-EEEEEeCC------E-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccc
Confidence 4677 99999963 2 23 89999999999999999999999999999999999999999999987531 2
Q ss_pred HHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhc
Q 000284 1429 KAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIG 1508 (1723)
Q Consensus 1429 ~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~ 1508 (1723)
...++++||+||++.+++.+||+||+.+... ...++++.++++.++|.+..++++.+|||||||||+|||||+.
T Consensus 72 ~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~------~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qRvalaraL~~ 145 (352)
T PRK11144 72 PPEKRRIGYVFQDARLFPHYKVRGNLRYGMA------KSMVAQFDKIVALLGIEPLLDRYPGSLSGGEKQRVAIGRALLT 145 (352)
T ss_pred chhhCCEEEEcCCcccCCCCcHHHHHHhhhh------hhhHHHHHHHHHHcCCchhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 2346789999999999999999999986432 1224567889999999988999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000284 1509 DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1583 (1723)
Q Consensus 1509 ~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~ 1583 (1723)
+|++|||||||+|||+.+++.+++.|+++.++.| +|||++|||++++..+|||+++|++|+++..|+++++.++
T Consensus 146 ~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g-~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~ 219 (352)
T PRK11144 146 APELLLMDEPLASLDLPRKRELLPYLERLAREIN-IPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWAS 219 (352)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhC
Confidence 9999999999999999999999999999865434 6899999999999999999999999999999999998754
No 313
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-41 Score=391.94 Aligned_cols=220 Identities=24% Similarity=0.352 Sum_probs=195.2
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhc
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRK 526 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~ 526 (1723)
..++++||++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. ...+.++
T Consensus 10 ~~l~i~~l~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 85 (265)
T PRK10575 10 TTFALRNVSFRVPG----RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFAR 85 (265)
T ss_pred ceEEEeeEEEEECC----EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhh
Confidence 47999999999953 469999999999999999999999999999999999999999999999998743 3455678
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHH-hcC---CCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcC
Q 000284 527 GLGVCPQYDILFPELTVREHLEMFAV-LKG---VKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGD 602 (1723)
Q Consensus 527 ~ig~~~Q~~~l~~~lTv~e~l~~~~~-~~g---~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~ 602 (1723)
.+||+||++.+++.+|+.||+.+... ..+ ......+++++++++.+++.+..++++++||||||||++|||||+.+
T Consensus 86 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~ 165 (265)
T PRK10575 86 KVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAMLVAQD 165 (265)
T ss_pred heEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCcccCCHHHHHHHHHHHHHhcC
Confidence 89999999888889999999987431 111 11233456789999999999888999999999999999999999999
Q ss_pred CcEeeccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 603 SKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 603 p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
|++|||||||+|||+.+++.++++|++++ + |+|||++||+++++..+||||++|++|+++..|++.++.
T Consensus 166 p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (265)
T PRK10575 166 SRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELM 236 (265)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhc
Confidence 99999999999999999999999999985 3 899999999999999999999999999999999876653
No 314
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=388.77 Aligned_cols=220 Identities=25% Similarity=0.400 Sum_probs=193.4
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhc
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAAR 1432 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~~ 1432 (1723)
+++++|++++|++ +.+++|+||++++||++||+|+||||||||+++|+|+++|++|+|.++|.++.. .....+
T Consensus 2 ~l~~~~l~~~~~~------~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 75 (255)
T PRK11231 2 TLRTENLTVGYGT------KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLA 75 (255)
T ss_pred EEEEEeEEEEECC------EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHh
Confidence 5899999999953 469999999999999999999999999999999999999999999999998754 334556
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHH----HcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhc
Q 000284 1433 RLIGYCPQFDALLEYLTVQEHLELYAR----IKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIG 1508 (1723)
Q Consensus 1433 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~----~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~ 1508 (1723)
+.+||+||++.+++.+|+.||+.+... ..+.......+.+.++++.+++.+..++++.+|||||||||+|||||+.
T Consensus 76 ~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~ 155 (255)
T PRK11231 76 RRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRLTDLSGGQRQRAFLAMVLAQ 155 (255)
T ss_pred hheEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCcccCCHHHHHHHHHHHHHhc
Confidence 789999999988888999999986421 1222223344567888999999888999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000284 1509 DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1581 (1723)
Q Consensus 1509 ~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~ 1581 (1723)
+|++|||||||+|||+.+++.+++.|+++++ +| +|||++||+++++.++|||+++|++|+++..|+++++.
T Consensus 156 ~p~llllDEP~~~LD~~~~~~l~~~l~~l~~-~~-~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 226 (255)
T PRK11231 156 DTPVVLLDEPTTYLDINHQVELMRLMRELNT-QG-KTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVM 226 (255)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhc
Confidence 9999999999999999999999999999853 44 58999999999999999999999999999999887764
No 315
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=393.67 Aligned_cols=221 Identities=28% Similarity=0.442 Sum_probs=199.4
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCc---ceEEEccccCCc-cHHH
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTT---GDALVFGKNITA-DMDE 523 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~---G~i~i~g~~i~~-~~~~ 523 (1723)
..|+++|++|.|++. .+.+++|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.++.. ....
T Consensus 4 ~~l~i~~l~~~~~~~--~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~ 81 (282)
T PRK13640 4 NIVEFKHVSFTYPDS--KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWD 81 (282)
T ss_pred ceEEEEEEEEEcCCC--CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHH
Confidence 469999999999642 2359999999999999999999999999999999999999998 899999998854 3345
Q ss_pred HhcceEEEccCCC-CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcC
Q 000284 524 IRKGLGVCPQYDI-LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGD 602 (1723)
Q Consensus 524 ~r~~ig~~~Q~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~ 602 (1723)
.++++|||||++. +++.+||.||+.+.....+.+.++.++++.++++.+||.+..++++++||||||||++||+||+.+
T Consensus 82 ~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LS~G~~qrv~laral~~~ 161 (282)
T PRK13640 82 IREKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEPANLSGGQKQRVAIAGILAVE 161 (282)
T ss_pred HHhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCcccCCHHHHHHHHHHHHHHcC
Confidence 6788999999974 677889999998776666777777778899999999999989999999999999999999999999
Q ss_pred CcEeeccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 603 SKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 603 p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
|++|||||||+|||+.+++.++++|+++. + |+|||++||+++++. .|||+++|++|++++.|++.++.
T Consensus 162 P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~-~~d~i~~l~~G~i~~~g~~~~~~ 231 (282)
T PRK13640 162 PKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEAN-MADQVLVLDDGKLLAQGSPVEIF 231 (282)
T ss_pred CCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHH-hCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999985 3 899999999999996 79999999999999999987764
No 316
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.8e-41 Score=382.38 Aligned_cols=230 Identities=28% Similarity=0.491 Sum_probs=206.1
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCC-C----CcceEEEccccCCc----c
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-P----TTGDALVFGKNITA----D 520 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-p----~~G~i~i~g~~i~~----~ 520 (1723)
++++||+..|....+...||+||||++++||++||+|++|||||||.+.|.|+++ | ++|+|.++|.|+.. .
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 6899999999876666789999999999999999999999999999999999998 4 58999999998853 2
Q ss_pred HHHHh-cceEEEccCC--CCCCCCCHHHHHHHHHHhcC-C-CHHHHHHHHHHHHHHcCCCc---ccccccCCCChhHHHH
Q 000284 521 MDEIR-KGLGVCPQYD--ILFPELTVREHLEMFAVLKG-V-KEELLESVVAEMVDEVGLAD---KVNIVVRALSGGMKRK 592 (1723)
Q Consensus 521 ~~~~r-~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~g-~-~~~~~~~~v~~~l~~~~l~~---~~~~~~~~LSgGqkqr 592 (1723)
+.++| +.|+++||++ .|.|-+||.+.+.-.....+ . .++++++++.++|+.+||++ ..+.++++||||||||
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YPhelSGGMrQR 161 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERRLKSYPHELSGGMRQR 161 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHHHHhhCCcccCCcHHHH
Confidence 33555 6799999997 68999999999876666543 3 46778899999999999986 4599999999999999
Q ss_pred HHHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHH
Q 000284 593 LSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 670 (1723)
Q Consensus 593 l~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~L 670 (1723)
|.||+||+.+|++||.||||++||+..+.++.++|++++ .|.|+|++|||+..+.++||||+||..|++++.|+..++
T Consensus 162 V~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iVE~g~~~~i 241 (316)
T COG0444 162 VMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIVEEGPVEEI 241 (316)
T ss_pred HHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEEEeCCHHHH
Confidence 999999999999999999999999999999999999996 489999999999999999999999999999999999888
Q ss_pred HhhhCCcEE
Q 000284 671 KHQYGVGYT 679 (1723)
Q Consensus 671 k~~~g~gy~ 679 (1723)
.+....-|+
T Consensus 242 ~~~P~HPYT 250 (316)
T COG0444 242 FKNPKHPYT 250 (316)
T ss_pred hcCCCChHH
Confidence 776666554
No 317
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=386.92 Aligned_cols=219 Identities=29% Similarity=0.434 Sum_probs=195.6
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCC-----CcceEEEccccCCc---
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA--- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~--- 519 (1723)
+.++++|+++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+.+| ++|+|.++|.++..
T Consensus 3 ~~l~~~~l~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~ 78 (251)
T PRK14270 3 IKMESKNLNLWYGE----KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDV 78 (251)
T ss_pred cEEEEEEeEEEECC----eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccc
Confidence 57899999999953 4699999999999999999999999999999999999875 89999999998853
Q ss_pred cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHH
Q 000284 520 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLS 594 (1723)
Q Consensus 520 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~v~~~l~~~~l~----~~~~~~~~~LSgGqkqrl~ 594 (1723)
+....++.+||+||++.+++ +|++||+.+.....+. ...+.+++++++++.+|+. +..++.+.+||||||||++
T Consensus 79 ~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~ 157 (251)
T PRK14270 79 DVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKDDLKKSALKLSGGQQQRLC 157 (251)
T ss_pred cHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHHHHHHH
Confidence 23456788999999999887 8999999987665554 3445567788999999884 3568889999999999999
Q ss_pred HHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 595 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 595 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
|||||+.+|+++||||||+|||+.++++++++|+++++++|||++||+++++..+|||+++|++|++++.|++.++.
T Consensus 158 laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 158 IARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHHh
Confidence 99999999999999999999999999999999999877799999999999999999999999999999999987764
No 318
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-40 Score=387.24 Aligned_cols=220 Identities=25% Similarity=0.419 Sum_probs=192.9
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCCC-
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIRS- 1426 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p-----~~G~i~i~G~~i~~- 1426 (1723)
.+|+++|++++|++ +.+++|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|.++..
T Consensus 6 ~~l~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~ 79 (254)
T PRK14273 6 AIIETENLNLFYTD------FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSN 79 (254)
T ss_pred ceEEEeeeEEEeCC------ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccc
Confidence 47999999999953 4589999999999999999999999999999999999997 59999999998753
Q ss_pred --ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCC-ChhhHHHHHHHHHHHcCC----ccccCCCCCCCChhHHHH
Q 000284 1427 --DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGV-AEYRMDDVVMEKLVEFDL----LKHAKKPSFTLSGGNKRK 1499 (1723)
Q Consensus 1427 --~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~~~~~l~~~~l----~~~~~~~~~~LSgG~kqr 1499 (1723)
.....+++|||+||++.+++ +|++||+.+.....+. .....++.+.++++.+++ .+..++++++||||||||
T Consensus 80 ~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgG~~qr 158 (254)
T PRK14273 80 NFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVKDKLNTNALSLSGGQQQR 158 (254)
T ss_pred cccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhCCcccCCHHHHHH
Confidence 23346778999999988875 8999999886554443 233445667888898887 345789999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000284 1500 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1579 (1723)
Q Consensus 1500 l~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~ 1579 (1723)
++|||||+.+|++|||||||+|||+.+++.++++|++++ + + +|||++||+++++..+|||+++|++|++++.|++++
T Consensus 159 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 235 (254)
T PRK14273 159 LCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-E-S-YTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDE 235 (254)
T ss_pred HHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-c-C-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999999984 3 4 589999999999999999999999999999999988
Q ss_pred HHh
Q 000284 1580 LKT 1582 (1723)
Q Consensus 1580 l~~ 1582 (1723)
+.+
T Consensus 236 ~~~ 238 (254)
T PRK14273 236 LFF 238 (254)
T ss_pred HHh
Confidence 864
No 319
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=401.07 Aligned_cols=225 Identities=24% Similarity=0.325 Sum_probs=194.8
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCC----CCcceEEEccccCCc-cHH-
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP----PTTGDALVFGKNITA-DMD- 522 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~----p~~G~i~i~g~~i~~-~~~- 522 (1723)
.++++||+|.|+.+.+...||+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.. ...
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 58999999999754444679999999999999999999999999999999999997 589999999998853 222
Q ss_pred --HH-hcceEEEccCCC--CCCCCCHHHHHHHHHHh---cCC---CHHHHHHHHHHHHHHcCCCc---ccccccCCCChh
Q 000284 523 --EI-RKGLGVCPQYDI--LFPELTVREHLEMFAVL---KGV---KEELLESVVAEMVDEVGLAD---KVNIVVRALSGG 588 (1723)
Q Consensus 523 --~~-r~~ig~~~Q~~~--l~~~lTv~e~l~~~~~~---~g~---~~~~~~~~v~~~l~~~~l~~---~~~~~~~~LSgG 588 (1723)
.. ++.|||+||++. +++.+||.+++...... .+. ...+.++++.++|+.+||.+ ..++.+.+||||
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~p~~LSgG 162 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELTEG 162 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhCCchhCCHH
Confidence 22 357999999985 68889999999764321 121 22345678899999999975 358899999999
Q ss_pred HHHHHHHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecC
Q 000284 589 MKRKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGS 666 (1723)
Q Consensus 589 qkqrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs 666 (1723)
|||||+||+||+.+|++|||||||+|||+.++++++++|+++++ |.|||++|||++++..+||||++|.+|++++.|+
T Consensus 163 ~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G~ive~g~ 242 (330)
T PRK15093 163 ECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCGQTVETAP 242 (330)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECC
Confidence 99999999999999999999999999999999999999999863 8999999999999999999999999999999999
Q ss_pred HHHHHhh
Q 000284 667 SLFLKHQ 673 (1723)
Q Consensus 667 ~~~Lk~~ 673 (1723)
+.++.+.
T Consensus 243 ~~~i~~~ 249 (330)
T PRK15093 243 SKELVTT 249 (330)
T ss_pred HHHHHhC
Confidence 9887554
No 320
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.5e-40 Score=383.20 Aligned_cols=220 Identities=27% Similarity=0.435 Sum_probs=196.3
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1434 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~~ 1434 (1723)
++++|++++|++ +.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.... ..++.
T Consensus 1 i~i~~l~~~~~~------~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~-~~~~~ 73 (237)
T TIGR00968 1 IEIANISKRFGS------FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVH-ARDRK 73 (237)
T ss_pred CEEEEEEEEECC------eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCC-hhhcC
Confidence 468999999963 46999999999999999999999999999999999999999999999999886422 34678
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000284 1435 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1514 (1723)
Q Consensus 1435 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vll 1514 (1723)
+|||||++.+++.+|+.||+.+....++.......+.+.++++.+++.+..++.+.+||||||||++||+||+.+|++++
T Consensus 74 i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~lll 153 (237)
T TIGR00968 74 IGFVFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGDRYPNQLSGGQRQRVALARALAVEPQVLL 153 (237)
T ss_pred EEEEecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999889999999876555554444445667889999999988999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1515 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1515 LDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
|||||+|||+.+++.+++.|++++++.+ +|||++||++++++.+|||+++|++|++++.|+++++++
T Consensus 154 lDEP~~~LD~~~~~~~~~~l~~~~~~~~-~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 220 (237)
T TIGR00968 154 LDEPFGALDAKVRKELRSWLRKLHDEVH-VTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYD 220 (237)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHc
Confidence 9999999999999999999999864324 689999999999999999999999999999999988864
No 321
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.3e-40 Score=377.73 Aligned_cols=212 Identities=22% Similarity=0.401 Sum_probs=185.5
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1434 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~~ 1434 (1723)
++++||+|.|+. .++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|+++.... ..++.
T Consensus 1 ~~~~~l~~~~~~--------~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~ 71 (213)
T TIGR01277 1 LALDKVRYEYEH--------LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA-PYQRP 71 (213)
T ss_pred CeEEeeeEEeCC--------cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC-hhccc
Confidence 368999999952 467999999999999999999999999999999999999999999999986422 35678
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000284 1435 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1514 (1723)
Q Consensus 1435 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vll 1514 (1723)
+||+||++.+++.+|+.||+.+............++++.++++.+++.+..++++.+||||||||++|||||+.+|+++|
T Consensus 72 i~~v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~lll 151 (213)
T TIGR01277 72 VSMLFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLPEQLSGGQRQRVALARCLVRPNPILL 151 (213)
T ss_pred eEEEeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999989999999764332111122234567889999999988999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecC
Q 000284 1515 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGS 1576 (1723)
Q Consensus 1515 LDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~ 1576 (1723)
|||||+|||+.+++.+++.|+++.++.+ +|||++||+++++..+|||+++|++|++++.|.
T Consensus 152 lDEPt~~LD~~~~~~~~~~l~~~~~~~~-~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 152 LDEPFSALDPLLREEMLALVKQLCSERQ-RTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred EcCCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 9999999999999999999999864434 689999999999999999999999999998874
No 322
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1e-40 Score=384.56 Aligned_cols=218 Identities=27% Similarity=0.427 Sum_probs=197.9
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcceE
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 529 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 529 (1723)
++++|+++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++... ...++.+|
T Consensus 1 i~i~~l~~~~~~----~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~-~~~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFGS----FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRV-HARDRKIG 75 (237)
T ss_pred CEEEEEEEEECC----eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcC-ChhhcCEE
Confidence 468999999953 4699999999999999999999999999999999999999999999999987532 23467899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeecc
Q 000284 530 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 609 (1723)
Q Consensus 530 ~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 609 (1723)
||||++.+|+.+|+.||+.+.....+.......++++++++.+++.+..++.+.+||||||||++||+||+.+|+++|||
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~llllD 155 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGDRYPNQLSGGQRQRVALARALAVEPQVLLLD 155 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999999999999987766555555555678899999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 610 EPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 610 EPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
|||+|||+.+++.++++|+++++ ++|||++||+++++..+||||++|++|++++.|++.++++
T Consensus 156 EP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 220 (237)
T TIGR00968 156 EPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYD 220 (237)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHc
Confidence 99999999999999999999854 7999999999999999999999999999999999888754
No 323
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1e-40 Score=389.15 Aligned_cols=218 Identities=21% Similarity=0.322 Sum_probs=193.7
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhcc
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 527 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 527 (1723)
+++++|+++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. .....++.
T Consensus 1 ~l~~~~l~~~~~~----~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 76 (256)
T TIGR03873 1 GLRLSRVSWSAGG----RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARR 76 (256)
T ss_pred CceEEeEEEEECC----EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhh
Confidence 3789999999953 469999999999999999999999999999999999999999999999998754 34456678
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHH-h---cCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCC
Q 000284 528 LGVCPQYDILFPELTVREHLEMFAV-L---KGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDS 603 (1723)
Q Consensus 528 ig~~~Q~~~l~~~lTv~e~l~~~~~-~---~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p 603 (1723)
+||+||++.+++.+||+||+.++.. . .+....+..+++.++++.+++.+..++.+.+||||||||++||+||+.+|
T Consensus 77 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p 156 (256)
T TIGR03873 77 VALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDMSTLSGGERQRVHVARALAQEP 156 (256)
T ss_pred eEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 9999999987888999999987531 1 12222334567899999999998889999999999999999999999999
Q ss_pred cEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHH
Q 000284 604 KVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 670 (1723)
Q Consensus 604 ~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~L 670 (1723)
+++||||||+|||+.+++.++++|++++ +|+|||++||+++++..+||||++|++|+++..|++.++
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 224 (256)
T TIGR03873 157 KLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREV 224 (256)
T ss_pred CEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHh
Confidence 9999999999999999999999999986 489999999999999999999999999999999987655
No 324
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.3e-40 Score=388.41 Aligned_cols=219 Identities=26% Similarity=0.402 Sum_probs=192.7
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhcc
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAARR 1433 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~~~ 1433 (1723)
|+++|+++.|++ +.+++|+||++++||++||+|+||||||||+++|+|+++|++|+|.++|.++.. .....++
T Consensus 2 l~~~~l~~~~~~------~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 75 (256)
T TIGR03873 2 LRLSRVSWSAGG------RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARAR 75 (256)
T ss_pred ceEEeEEEEECC------EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhh
Confidence 679999999953 469999999999999999999999999999999999999999999999998865 3344566
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHH-H---cCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000284 1434 LIGYCPQFDALLEYLTVQEHLELYAR-I---KGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1509 (1723)
Q Consensus 1434 ~ig~~pQ~~~l~~~lTv~e~l~~~~~-~---~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~ 1509 (1723)
.+||+||++.+++.+|++||+.+... . .+....+..+++.++++.+++.+..++++.+||||||||++||+||+.+
T Consensus 76 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (256)
T TIGR03873 76 RVALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDMSTLSGGERQRVHVARALAQE 155 (256)
T ss_pred heEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhcC
Confidence 79999999877788999999987421 1 1222223345678899999999889999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000284 1510 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1581 (1723)
Q Consensus 1510 p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~ 1581 (1723)
|+++||||||+|||+.+++.++++|++++ ++| +|||++||+++++.++||||++|++|++++.|+++++.
T Consensus 156 p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 225 (256)
T TIGR03873 156 PKLLLLDEPTNHLDVRAQLETLALVRELA-ATG-VTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVL 225 (256)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHH-hcC-CEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhh
Confidence 99999999999999999999999999986 344 58999999999999999999999999999999988763
No 325
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-41 Score=388.08 Aligned_cols=206 Identities=29% Similarity=0.420 Sum_probs=187.0
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcc
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKG 527 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ 527 (1723)
..|+++||++.|++ +.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++ ...++.
T Consensus 11 ~~l~i~~l~~~~~~----~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~----~~~~~~ 82 (257)
T PRK11247 11 TPLLLNAVSKRYGE----RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPL----AEARED 82 (257)
T ss_pred CcEEEEEEEEEECC----cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEH----HHhhCc
Confidence 56999999999953 4699999999999999999999999999999999999999999999998764 245678
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEee
Q 000284 528 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVI 607 (1723)
Q Consensus 528 ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vli 607 (1723)
+||+||++.+++.+||+||+.+... + ..++++.++++.+||.+..++++.+||||||||++|||||+.+|+++|
T Consensus 83 i~~v~q~~~l~~~~tv~enl~~~~~--~----~~~~~~~~~l~~~gl~~~~~~~~~~LSgGqkqrl~laraL~~~p~lll 156 (257)
T PRK11247 83 TRLMFQDARLLPWKKVIDNVGLGLK--G----QWRDAALQALAAVGLADRANEWPAALSGGQKQRVALARALIHRPGLLL 156 (257)
T ss_pred eEEEecCccCCCCCcHHHHHHhccc--c----hHHHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999998999999987421 1 134678899999999988899999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCH
Q 000284 608 LDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSS 667 (1723)
Q Consensus 608 LDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~ 667 (1723)
|||||+|||+.+++.++++|+++. .|+|||++||+++++..+||||++|++|++++.|+.
T Consensus 157 LDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~ 218 (257)
T PRK11247 157 LDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTV 218 (257)
T ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeccc
Confidence 999999999999999999999873 489999999999999999999999999999987764
No 326
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-40 Score=387.92 Aligned_cols=221 Identities=25% Similarity=0.425 Sum_probs=193.5
Q ss_pred cceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCCC
Q 000284 1352 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIRS 1426 (1723)
Q Consensus 1352 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p-----~~G~i~i~G~~i~~ 1426 (1723)
+..|+++|++|.|++ +.+++|+||+|++||++||+|+||||||||+++|+|+++| ++|+|+++|+++..
T Consensus 17 ~~~l~~~nl~~~~~~------~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~ 90 (267)
T PRK14235 17 EIKMRARDVSVFYGE------KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYD 90 (267)
T ss_pred CceEEEEeEEEEECC------EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcc
Confidence 457999999999963 4599999999999999999999999999999999999975 89999999999853
Q ss_pred ---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCC--ChhhHHHHHHHHHHHcCCcc----ccCCCCCCCChhHH
Q 000284 1427 ---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGV--AEYRMDDVVMEKLVEFDLLK----HAKKPSFTLSGGNK 1497 (1723)
Q Consensus 1427 ---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~--~~~~~~~~~~~~l~~~~l~~----~~~~~~~~LSgG~k 1497 (1723)
.....++.+||+||++.+++. |+.||+.+....++. +..+..+++.++++.+++.+ ..++++.+||||||
T Consensus 91 ~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~ 169 (267)
T PRK14235 91 PRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKDRLHEPGTGLSGGQQ 169 (267)
T ss_pred cccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHH
Confidence 234567789999999888874 999999876554443 23334566788999999953 46788999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecCh
Q 000284 1498 RKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSP 1577 (1723)
Q Consensus 1498 qrl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~ 1577 (1723)
||++|||||+.+|++|||||||+|||+.+++.+.+.|++++ + + .|||++||++++++.+|||+++|++|++++.|++
T Consensus 170 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~-~-~-~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 170 QRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELR-Q-N-YTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHh-c-C-CeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999999999985 3 4 5899999999999999999999999999999999
Q ss_pred hHHHh
Q 000284 1578 QHLKT 1582 (1723)
Q Consensus 1578 ~~l~~ 1582 (1723)
+++..
T Consensus 247 ~~~~~ 251 (267)
T PRK14235 247 EKMFT 251 (267)
T ss_pred HHHHh
Confidence 88754
No 327
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=389.41 Aligned_cols=221 Identities=24% Similarity=0.414 Sum_probs=193.4
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCC---ceEEEEcCeeCCCC--
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPT---DGTAFIFGKDIRSD-- 1427 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~---~G~i~i~G~~i~~~-- 1427 (1723)
++|+++||++.|++ +.+++++||++++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++...
T Consensus 3 ~~l~~~nl~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~ 76 (262)
T PRK09984 3 TIIRVEKLAKTFNQ------HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGR 76 (262)
T ss_pred cEEEEeeEEEEeCC------eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccc
Confidence 47999999999953 46999999999999999999999999999999999999987 49999999987531
Q ss_pred ----hHHhccceEEEecCCCCCCCCCHHHHHHHHHHH--------cCCChhhHHHHHHHHHHHcCCccccCCCCCCCChh
Q 000284 1428 ----PKAARRLIGYCPQFDALLEYLTVQEHLELYARI--------KGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGG 1495 (1723)
Q Consensus 1428 ----~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~--------~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG 1495 (1723)
....++++||+||++.+++.+|++||+.+.... .+....+.++++.++++.+++.+..++++.+||||
T Consensus 77 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G 156 (262)
T PRK09984 77 LARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRVSTLSGG 156 (262)
T ss_pred cchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCccccCHH
Confidence 234567899999999999999999999764320 01112334567888999999988889999999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000284 1496 NKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1575 (1723)
Q Consensus 1496 ~kqrl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g 1575 (1723)
|||||+|||||+.+|+||||||||+|||+.+++.+++.|+++++++| +|||++||+++++..+|||+++|++|++++.|
T Consensus 157 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~g 235 (262)
T PRK09984 157 QQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDG-ITVVVTLHQVDYALRYCERIVALRQGHVFYDG 235 (262)
T ss_pred HHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999999864444 68999999999999999999999999999999
Q ss_pred ChhHH
Q 000284 1576 SPQHL 1580 (1723)
Q Consensus 1576 ~~~~l 1580 (1723)
+++++
T Consensus 236 ~~~~~ 240 (262)
T PRK09984 236 SSQQF 240 (262)
T ss_pred CHHHh
Confidence 98775
No 328
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-40 Score=388.99 Aligned_cols=218 Identities=26% Similarity=0.400 Sum_probs=194.0
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhcc
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 527 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 527 (1723)
+++++|+++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. +....++.
T Consensus 2 ~l~~~~l~~~~~~----~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (255)
T PRK11231 2 TLRTENLTVGYGT----KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARR 77 (255)
T ss_pred EEEEEeEEEEECC----EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhh
Confidence 4789999999953 469999999999999999999999999999999999999999999999988743 34456678
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHH----hcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCC
Q 000284 528 LGVCPQYDILFPELTVREHLEMFAV----LKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDS 603 (1723)
Q Consensus 528 ig~~~Q~~~l~~~lTv~e~l~~~~~----~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p 603 (1723)
+||+||++.+++.+|+.||+.+... ..+......+++++++++.+|+.+..++.+.+||||||||++||||++.+|
T Consensus 78 i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p 157 (255)
T PRK11231 78 LALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRLTDLSGGQRQRAFLAMVLAQDT 157 (255)
T ss_pred eEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 9999999998989999999987421 122222344567889999999998889999999999999999999999999
Q ss_pred cEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHH
Q 000284 604 KVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 670 (1723)
Q Consensus 604 ~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~L 670 (1723)
++|||||||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++|++|+++..|++.++
T Consensus 158 ~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 225 (255)
T PRK11231 158 PVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEV 225 (255)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHh
Confidence 9999999999999999999999999985 589999999999999999999999999999999887655
No 329
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=4.7e-41 Score=381.46 Aligned_cols=206 Identities=28% Similarity=0.456 Sum_probs=178.5
Q ss_pred EEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccceE
Q 000284 1357 LRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRLIG 1436 (1723)
Q Consensus 1357 v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~~ig 1436 (1723)
++||+|+|++ +.+++++||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++. ..++++|
T Consensus 2 ~~~l~~~~~~------~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~----~~~~~i~ 71 (213)
T cd03235 2 VEDLTVSYGG------HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE----KERKRIG 71 (213)
T ss_pred cccceeEECC------EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH----HHHhheE
Confidence 6899999953 45999999999999999999999999999999999999999999999998764 3567899
Q ss_pred EEecCCCCC--CCCCHHHHHHHHHHHcC----CChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000284 1437 YCPQFDALL--EYLTVQEHLELYARIKG----VAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1510 (1723)
Q Consensus 1437 ~~pQ~~~l~--~~lTv~e~l~~~~~~~g----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p 1510 (1723)
|+||++.+. ..+|++||+.+.....+ ......++++.++++.+++.+..++++.+||||||||++||+||+.+|
T Consensus 72 ~v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p 151 (213)
T cd03235 72 YVPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQIGELSGGQQQRVLLARALVQDP 151 (213)
T ss_pred EeccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 999998763 23799999987433211 122334567788999999988889999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000284 1511 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1575 (1723)
Q Consensus 1511 ~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g 1575 (1723)
++|||||||+|||+.+++.+++.|+++++ +| +|||++||++++++.+|||+++|++| +++.|
T Consensus 152 ~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 152 DLLLLDEPFAGVDPKTQEDIYELLRELRR-EG-MTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHh-cC-CEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999999999999999999999864 44 58999999999999999999999886 55544
No 330
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.3e-40 Score=404.30 Aligned_cols=214 Identities=21% Similarity=0.341 Sum_probs=189.9
Q ss_pred eEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-----hHHhcc
Q 000284 1359 NLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-----PKAARR 1433 (1723)
Q Consensus 1359 ~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-----~~~~~~ 1433 (1723)
||+|+|++ +. + |+||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++... ....++
T Consensus 4 ~l~~~~~~------~~-~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~ 75 (354)
T TIGR02142 4 RFSKRLGD------FS-L-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKR 75 (354)
T ss_pred EEEEEECC------EE-E-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhC
Confidence 89999963 23 4 89999999999999999999999999999999999999999999988532 123567
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000284 1434 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1513 (1723)
Q Consensus 1434 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vl 1513 (1723)
++||+||++.+++.+||+||+.+..... ...+.++++.++++.++|.+..++++.+|||||||||+|||||+.+|++|
T Consensus 76 ~i~~v~q~~~l~~~~tv~enl~~~~~~~--~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGqkqRvalAraL~~~p~ll 153 (354)
T TIGR02142 76 RIGYVFQEARLFPHLSVRGNLRYGMKRA--RPSERRISFERVIELLGIGHLLGRLPGRLSGGEKQRVAIGRALLSSPRLL 153 (354)
T ss_pred CeEEEecCCccCCCCcHHHHHHHHhhcc--ChhHHHHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHHcCCCEE
Confidence 8999999999999999999998754322 22334556888999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000284 1514 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1583 (1723)
Q Consensus 1514 lLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~ 1583 (1723)
||||||+|||+.+++.+++.|++++++.| +|||++|||++++..+|||+++|++|++++.|+++++..+
T Consensus 154 lLDEPts~LD~~~~~~l~~~L~~l~~~~g-~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (354)
T TIGR02142 154 LMDEPLAALDDPRKYEILPYLERLHAEFG-IPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWAS 222 (354)
T ss_pred EEcCCCcCCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcC
Confidence 99999999999999999999999865434 6899999999999999999999999999999999998754
No 331
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=390.08 Aligned_cols=219 Identities=25% Similarity=0.378 Sum_probs=193.5
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCC-----CCcceEEEccccCCc---
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA--- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~--- 519 (1723)
..|+++||++.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++..
T Consensus 12 ~~l~i~nl~~~~~~----~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~ 87 (269)
T PRK14259 12 IIISLQNVTISYGT----FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRV 87 (269)
T ss_pred ceEEEEeEEEEECC----EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccC
Confidence 47999999999953 469999999999999999999999999999999999987 699999999998742
Q ss_pred cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHHH
Q 000284 520 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLSL 595 (1723)
Q Consensus 520 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~----~~~~~~~~~LSgGqkqrl~l 595 (1723)
+....|+.+||+||++.+++. ||+||+.+.....+... ..++++.++++.+++. +..++++.+||||||||++|
T Consensus 88 ~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrl~l 165 (269)
T PRK14259 88 DPVEVRRRIGMVFQQPNPFPK-SIYENIAFGARINGYTG-DMDELVERSLRKAAVWDECKDKLNESGYSLSGGQQQRLCI 165 (269)
T ss_pred CHHHHhhceEEEccCCccchh-hHHHHHhhhhhhcCCcH-HHHHHHHHHHHHhCCcchhhhhhCCCcccCCHHHHHHHHH
Confidence 345667889999999998884 99999998776555432 3456778889998873 45788999999999999999
Q ss_pred HHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeC-----------CEEEEe
Q 000284 596 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMAN-----------GSLKCC 664 (1723)
Q Consensus 596 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~-----------G~l~~~ 664 (1723)
||||+.+|++|||||||+|||+.+++.++++|+++++++|||++||+++++..+|||+++|++ |+++..
T Consensus 166 aral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~~~~~ 245 (269)
T PRK14259 166 ARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGYLVEF 245 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccceEEEe
Confidence 999999999999999999999999999999999997789999999999999999999999996 678888
Q ss_pred cCHHHHHh
Q 000284 665 GSSLFLKH 672 (1723)
Q Consensus 665 Gs~~~Lk~ 672 (1723)
|++.++..
T Consensus 246 ~~~~~~~~ 253 (269)
T PRK14259 246 NETKKIFN 253 (269)
T ss_pred CCHHHHHh
Confidence 98877643
No 332
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=385.50 Aligned_cols=215 Identities=30% Similarity=0.443 Sum_probs=192.0
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhcc
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 527 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 527 (1723)
.++++|+++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. .....|+.
T Consensus 3 ~l~~~~l~~~~~~----~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 78 (241)
T PRK14250 3 EIEFKEVSYSSFG----KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRK 78 (241)
T ss_pred eEEEEeEEEEeCC----eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhc
Confidence 4889999999953 369999999999999999999999999999999999999999999999998753 34456788
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-cccccccCCCChhHHHHHHHHHHHhcCCcEe
Q 000284 528 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA-DKVNIVVRALSGGMKRKLSLGIALIGDSKVV 606 (1723)
Q Consensus 528 ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~LSgGqkqrl~lA~al~~~p~vl 606 (1723)
+||+||++.+++ .|++||+.+....++. .++++.++++.+|+. +..++.+.+||||||||++|||||+.+|+++
T Consensus 79 i~~~~q~~~~~~-~tv~e~l~~~~~~~~~----~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p~ll 153 (241)
T PRK14250 79 IGMVFQQPHLFE-GTVKDNIEYGPMLKGE----KNVDVEYYLSIVGLNKEYATRDVKNLSGGEAQRVSIARTLANNPEVL 153 (241)
T ss_pred EEEEecCchhch-hhHHHHHhcchhhcCc----HHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999998887 6999999875443321 235678899999997 5678999999999999999999999999999
Q ss_pred eccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 607 ILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 607 iLDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
||||||+|||+.+++.+++.|++++ .|+|||++||+++++..+||||++|++|+++..|++.++..
T Consensus 154 llDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (241)
T PRK14250 154 LLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFT 221 (241)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhc
Confidence 9999999999999999999999985 38999999999999999999999999999999999877643
No 333
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-40 Score=384.82 Aligned_cols=220 Identities=28% Similarity=0.448 Sum_probs=194.8
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCC---CCC--CcceEEEccccCCc---
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGL---IPP--TTGDALVFGKNITA--- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl---~~p--~~G~i~i~g~~i~~--- 519 (1723)
..++++|++|.|+. +.+++|+||++++||+++|+|+||||||||+++|+|+ .+| ++|+|.++|+++..
T Consensus 2 ~~l~~~~~~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 77 (250)
T PRK14245 2 VKIDARDVNFWYGD----FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGV 77 (250)
T ss_pred cEEEEEEEEEEECC----EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccc
Confidence 46899999999953 4699999999999999999999999999999999997 465 59999999998853
Q ss_pred cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHcCCCc----ccccccCCCChhHHHHHH
Q 000284 520 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVK-EELLESVVAEMVDEVGLAD----KVNIVVRALSGGMKRKLS 594 (1723)
Q Consensus 520 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~v~~~l~~~~l~~----~~~~~~~~LSgGqkqrl~ 594 (1723)
+....++.+||+||++.+++ .|+.||+.+....++.. .+..+++++++++.+|+.+ ..++++.+||||||||++
T Consensus 78 ~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~ 156 (250)
T PRK14245 78 QVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKDKLKESAFALSGGQQQRLC 156 (250)
T ss_pred cHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhhhhhCCcccCCHHHHHHHH
Confidence 23456788999999998887 59999998876555543 3345677899999999854 468889999999999999
Q ss_pred HHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 595 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 595 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
|||||+.+|+++||||||+|||+.+++.++++|+++++++|||++||+++++..+|||+++|++|+++..|++.++.+
T Consensus 157 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~~ 234 (250)
T PRK14245 157 IARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIFT 234 (250)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999999999999999999999999999778999999999999999999999999999999999887754
No 334
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=3.7e-41 Score=347.75 Aligned_cols=219 Identities=28% Similarity=0.457 Sum_probs=194.0
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1433 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~ 1433 (1723)
+|.+++++..|+. .==..+++|+.||+++|+||+|||||||+++|+|.+.|.+|+|.|+|+|....+ -.+|
T Consensus 1 ~l~L~~V~~~y~~--------~~~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~-P~~R 71 (231)
T COG3840 1 MLALDDVRFSYGH--------LPMRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASP-PAER 71 (231)
T ss_pred CccccceEEeeCc--------ceEEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCC-cccC
Confidence 3668899999963 223578999999999999999999999999999999999999999999986532 2356
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCC-hhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCE
Q 000284 1434 LIGYCPQFDALLEYLTVQEHLELYARIKGVA-EYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPI 1512 (1723)
Q Consensus 1434 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~v 1512 (1723)
-+++++|++.||..+||.+|+.+... .|+. ....+++++..+.++||..+.++.+.+|||||||||++||+|+++-+|
T Consensus 72 PVSmlFQEnNLFaHLtV~qNigLGl~-P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~~LSGGqRQRvALARclvR~~Pi 150 (231)
T COG3840 72 PVSMLFQENNLFAHLTVAQNIGLGLS-PGLKLNAEQREKVEAAAAQVGLAGFLKRLPGELSGGQRQRVALARCLVREQPI 150 (231)
T ss_pred ChhhhhhccccchhhhhhhhhcccCC-cccccCHHHHHHHHHHHHHhChhhHhhhCccccCchHHHHHHHHHHHhccCCe
Confidence 69999999999999999999987432 2322 233456788899999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000284 1513 VILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1583 (1723)
Q Consensus 1513 llLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~ 1583 (1723)
|+||||+++|||.-|.++..++.+++.+++ .|++++||..+++.+++||++++++|||.+.|+.+++.+.
T Consensus 151 lLLDEPFsALdP~LR~eMl~Lv~~l~~E~~-~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 151 LLLDEPFSALDPALRAEMLALVSQLCDERK-MTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred EEecCchhhcCHHHHHHHHHHHHHHHHhhC-CEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 999999999999999999999999987765 6899999999999999999999999999999999988754
No 335
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=404.38 Aligned_cols=211 Identities=24% Similarity=0.425 Sum_probs=190.0
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-----cHHHH
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-----DMDEI 524 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-----~~~~~ 524 (1723)
|++ ||+|.|++ + .+ |+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .....
T Consensus 2 l~~-~l~k~~~~----~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~ 74 (352)
T PRK11144 2 LEL-NFKQQLGD----L-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPE 74 (352)
T ss_pred eEE-EEEEEeCC----E-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchh
Confidence 567 99999953 2 23 8999999999999999999999999999999999999999999998753 13345
Q ss_pred hcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCc
Q 000284 525 RKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSK 604 (1723)
Q Consensus 525 r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~ 604 (1723)
++++|||||++.+|+.+||+||+.+... ...+++++++++.+||.+..++++++||||||||++|||||+.+|+
T Consensus 75 ~~~i~~v~q~~~l~~~~tv~enl~~~~~------~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qRvalaraL~~~p~ 148 (352)
T PRK11144 75 KRRIGYVFQDARLFPHYKVRGNLRYGMA------KSMVAQFDKIVALLGIEPLLDRYPGSLSGGEKQRVAIGRALLTAPE 148 (352)
T ss_pred hCCEEEEcCCcccCCCCcHHHHHHhhhh------hhhHHHHHHHHHHcCCchhhhCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 7789999999999999999999987532 1234678999999999998999999999999999999999999999
Q ss_pred EeeccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000284 605 VVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 673 (1723)
Q Consensus 605 vliLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~ 673 (1723)
+|||||||+|||+.+++.+++.|+++. + |+|||++||+++++..+||||++|++|++.+.|++.++.+.
T Consensus 149 llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~ 219 (352)
T PRK11144 149 LLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWAS 219 (352)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhC
Confidence 999999999999999999999999985 3 89999999999999999999999999999999999888654
No 336
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-40 Score=385.22 Aligned_cols=218 Identities=29% Similarity=0.486 Sum_probs=194.5
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCC-----CcceEEEccccCCc---c
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA---D 520 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~---~ 520 (1723)
.|+++||+|.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+.+| ++|+|.++|.++.. +
T Consensus 3 ~l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14240 3 KISVKDLDLFYGD----FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDID 78 (250)
T ss_pred eEEEEEEEEEECC----ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 4889999999953 3699999999999999999999999999999999999863 79999999998853 3
Q ss_pred HHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHHH
Q 000284 521 MDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLSL 595 (1723)
Q Consensus 521 ~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~v~~~l~~~~l~----~~~~~~~~~LSgGqkqrl~l 595 (1723)
....|+.+||+||++.+++ +|+.||+.+.....+. +.+..+++++++++.+++. +..++++.+||||||||++|
T Consensus 79 ~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~l 157 (250)
T PRK14240 79 VNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKDRLKKSALGLSGGQQQRLCI 157 (250)
T ss_pred hHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHHHHhcCCCCCCHHHHHHHHH
Confidence 3456788999999998887 8999999987655554 3345667888999999874 35688899999999999999
Q ss_pred HHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 596 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 596 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
||||+.+|+++||||||+|||+.+++.++++|+++++++|||++||+++++..+|||+++|++|+++..|++.++.
T Consensus 158 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 158 ARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDLF 233 (250)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999999999999999999977899999999999999999999999999999999987764
No 337
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.5e-40 Score=385.30 Aligned_cols=219 Identities=24% Similarity=0.343 Sum_probs=190.8
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCC--CCCcceEEEccccCCc-cHHH-Hh
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLI--PPTTGDALVFGKNITA-DMDE-IR 525 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~--~p~~G~i~i~g~~i~~-~~~~-~r 525 (1723)
|+++||+|.|++ +.+++|+||++++||+++|+||||||||||+++|+|+. +|++|+|.++|.++.. .... .+
T Consensus 1 l~~~~l~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (243)
T TIGR01978 1 LKIKDLHVSVED----KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERAR 76 (243)
T ss_pred CeEeeEEEEECC----EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhc
Confidence 468999999953 46999999999999999999999999999999999995 7999999999998753 2222 34
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcC-------CCHHHHHHHHHHHHHHcCCC-cccccccC-CCChhHHHHHHHH
Q 000284 526 KGLGVCPQYDILFPELTVREHLEMFAVLKG-------VKEELLESVVAEMVDEVGLA-DKVNIVVR-ALSGGMKRKLSLG 596 (1723)
Q Consensus 526 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g-------~~~~~~~~~v~~~l~~~~l~-~~~~~~~~-~LSgGqkqrl~lA 596 (1723)
..++|+||++.+++.+|++||+.+...... .+..+..+++.++++.+||. ...++.+. +|||||||||+||
T Consensus 77 ~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrl~la 156 (243)
T TIGR01978 77 AGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVNEGFSGGEKKRNEIL 156 (243)
T ss_pred cceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccccCcCHHHHHHHHHH
Confidence 569999999999999999999987544321 12334456789999999997 45678887 5999999999999
Q ss_pred HHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000284 597 IALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEEL-GDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 597 ~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l-~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
|||+.+|+++||||||+|||+.+++.++++|++++ +|+|||++||+++++..+ |||+++|++|++...|+++++..
T Consensus 157 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 234 (243)
T TIGR01978 157 QMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVELAKE 234 (243)
T ss_pred HHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHHHhcc
Confidence 99999999999999999999999999999999986 589999999999999998 89999999999999999876654
No 338
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-40 Score=385.93 Aligned_cols=221 Identities=24% Similarity=0.395 Sum_probs=194.4
Q ss_pred cceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeCCC
Q 000284 1352 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDIRS 1426 (1723)
Q Consensus 1352 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~-----p~~G~i~i~G~~i~~ 1426 (1723)
..+++++|++|.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++ |++|+|.++|+++..
T Consensus 11 ~~~l~~~~l~~~~~~------~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~ 84 (260)
T PRK10744 11 PSKIQVRNLNFYYGK------FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILT 84 (260)
T ss_pred CceEEEEEEEEEeCC------eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccc
Confidence 357999999999963 459999999999999999999999999999999999986 589999999999853
Q ss_pred ---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHc-CCChhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHH
Q 000284 1427 ---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIK-GVAEYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKR 1498 (1723)
Q Consensus 1427 ---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~-g~~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~kq 1498 (1723)
.....+++|||+||++.+++ +|++||+.+..... +.+..+..+++.++++.+++. +..++++.+|||||||
T Consensus 85 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~q 163 (260)
T PRK10744 85 PKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKDKLHQSGYSLSGGQQQ 163 (260)
T ss_pred cccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHHHHhcCCCCCCHHHHH
Confidence 23456788999999998887 89999998765443 445455556788899999974 4578899999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChh
Q 000284 1499 KLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQ 1578 (1723)
Q Consensus 1499 rl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~ 1578 (1723)
|++|||||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|++|++++.|+++
T Consensus 164 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~-~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 240 (260)
T PRK10744 164 RLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-Q-D-YTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTD 240 (260)
T ss_pred HHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-c-C-CeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 9999999999999999999999999999999999999984 3 4 58999999999999999999999999999999998
Q ss_pred HHHh
Q 000284 1579 HLKT 1582 (1723)
Q Consensus 1579 ~l~~ 1582 (1723)
++.+
T Consensus 241 ~~~~ 244 (260)
T PRK10744 241 TIFT 244 (260)
T ss_pred HHHh
Confidence 8754
No 339
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-40 Score=389.97 Aligned_cols=220 Identities=20% Similarity=0.330 Sum_probs=195.1
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhc
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRK 526 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~ 526 (1723)
..|+++||+|.|++ +.+++|+||++.+||+++|+||||||||||+++|+|+++|++|+|.++|+++.. .....++
T Consensus 6 ~~l~i~~l~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (265)
T PRK10253 6 ARLRGEQLTLGYGK----YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVAR 81 (265)
T ss_pred cEEEEEEEEEEECC----EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhh
Confidence 47999999999953 469999999999999999999999999999999999999999999999998753 3445567
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHH-hcC---CCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcC
Q 000284 527 GLGVCPQYDILFPELTVREHLEMFAV-LKG---VKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGD 602 (1723)
Q Consensus 527 ~ig~~~Q~~~l~~~lTv~e~l~~~~~-~~g---~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~ 602 (1723)
.+|||||++.+++.+|++||+.+... ..+ ...+..+++++++++.+||.+..++.+.+||||||||++|||||+.+
T Consensus 82 ~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~laral~~~ 161 (265)
T PRK10253 82 RIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQE 161 (265)
T ss_pred heEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCcccCChHHHHHHHHHHHHhcC
Confidence 89999999999989999999986421 111 11233456788999999999888999999999999999999999999
Q ss_pred CcEeeccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 603 SKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 603 p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
|+++||||||+|||+.+++.++++|+++. .|+|||++||+++++..+||||++|++|+++..|++.++.
T Consensus 162 p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 162 TAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIV 232 (265)
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999985 3899999999999999999999999999999999987654
No 340
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.3e-40 Score=404.32 Aligned_cols=214 Identities=22% Similarity=0.420 Sum_probs=191.3
Q ss_pred eEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCcc-----HHHHhcce
Q 000284 454 KLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITAD-----MDEIRKGL 528 (1723)
Q Consensus 454 ~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~-----~~~~r~~i 528 (1723)
||+|.|++ +. + |+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ....++.+
T Consensus 4 ~l~~~~~~----~~-~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i 77 (354)
T TIGR02142 4 RFSKRLGD----FS-L-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRI 77 (354)
T ss_pred EEEEEECC----EE-E-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCe
Confidence 79999953 23 4 99999999999999999999999999999999999999999999987531 23457789
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeec
Q 000284 529 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVIL 608 (1723)
Q Consensus 529 g~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliL 608 (1723)
||+||++.+|+.+||+||+.+..... ...+.+++++++++.+||.+..++++.+|||||||||+|||||+.+|++|||
T Consensus 78 ~~v~q~~~l~~~~tv~enl~~~~~~~--~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGqkqRvalAraL~~~p~lllL 155 (354)
T TIGR02142 78 GYVFQEARLFPHLSVRGNLRYGMKRA--RPSERRISFERVIELLGIGHLLGRLPGRLSGGEKQRVAIGRALLSSPRLLLM 155 (354)
T ss_pred EEEecCCccCCCCcHHHHHHHHhhcc--ChhHHHHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 99999999999999999998865432 2334456789999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhhhC
Q 000284 609 DEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYG 675 (1723)
Q Consensus 609 DEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~g 675 (1723)
||||+|||+.+++.+++.|++++ + |+|||++||+++++..+||||++|++|++++.|++.++.....
T Consensus 156 DEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 224 (354)
T TIGR02142 156 DEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASPD 224 (354)
T ss_pred cCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCcC
Confidence 99999999999999999999985 3 8999999999999999999999999999999999988865443
No 341
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-40 Score=385.72 Aligned_cols=221 Identities=21% Similarity=0.400 Sum_probs=193.4
Q ss_pred cceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC--C---CceEEEEcCeeCCC
Q 000284 1352 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY--P---TDGTAFIFGKDIRS 1426 (1723)
Q Consensus 1352 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~--p---~~G~i~i~G~~i~~ 1426 (1723)
+++|+++|++|.|++ +.+++|+||+|++||++||+|+||||||||+++|+|+++ | ++|+|.++|+++..
T Consensus 10 ~~~l~i~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~ 83 (259)
T PRK14274 10 QEVYQINGMNLWYGQ------HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILK 83 (259)
T ss_pred CceEEEeeEEEEECC------eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccc
Confidence 468999999999963 459999999999999999999999999999999999987 3 69999999998853
Q ss_pred ---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCC-ChhhHHHHHHHHHHHcCCcc----ccCCCCCCCChhHHH
Q 000284 1427 ---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGV-AEYRMDDVVMEKLVEFDLLK----HAKKPSFTLSGGNKR 1498 (1723)
Q Consensus 1427 ---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~~~~~l~~~~l~~----~~~~~~~~LSgG~kq 1498 (1723)
.....++.+||+||++.+++. |++||+.+.....+. .+.+..+++.++++.+++.+ ..++++.+|||||||
T Consensus 84 ~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LS~Gq~q 162 (259)
T PRK14274 84 GKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKDRLHTQALSLSGGQQQ 162 (259)
T ss_pred cccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhhhhCCcccCCHHHHH
Confidence 234567789999999988875 999999876555553 23344556778899998853 468899999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChh
Q 000284 1499 KLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQ 1578 (1723)
Q Consensus 1499 rl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~ 1578 (1723)
|++|||||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|++|++++.|+++
T Consensus 163 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 239 (259)
T PRK14274 163 RLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLK-E-K-YTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTN 239 (259)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh-c-C-CEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 9999999999999999999999999999999999999984 3 4 58999999999999999999999999999999999
Q ss_pred HHHh
Q 000284 1579 HLKT 1582 (1723)
Q Consensus 1579 ~l~~ 1582 (1723)
++.+
T Consensus 240 ~~~~ 243 (259)
T PRK14274 240 KMFS 243 (259)
T ss_pred HHhh
Confidence 8764
No 342
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=1.8e-40 Score=379.30 Aligned_cols=208 Identities=33% Similarity=0.569 Sum_probs=188.8
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcceE
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 529 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 529 (1723)
++++|++|.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++... .++.+|
T Consensus 1 l~l~~v~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~---~~~~~~ 73 (223)
T TIGR03740 1 LETKNLSKRFGK----QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRK---DLHKIG 73 (223)
T ss_pred CEEEeEEEEECC----EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccc---ccccEE
Confidence 468999999953 4699999999999999999999999999999999999999999999999876421 135799
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeecc
Q 000284 530 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 609 (1723)
Q Consensus 530 ~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 609 (1723)
|+||++.+++.+|++||+.++....+.+ ++++.++++.+|+.+..++.+.+||||||||++||||++.+|+++|||
T Consensus 74 ~~~q~~~~~~~~t~~~~~~~~~~~~~~~----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~~rv~laral~~~p~llllD 149 (223)
T TIGR03740 74 SLIESPPLYENLTARENLKVHTTLLGLP----DSRIDEVLNIVDLTNTGKKKAKQFSLGMKQRLGIAIALLNHPKLLILD 149 (223)
T ss_pred EEcCCCCccccCCHHHHHHHHHHHcCCC----HHHHHHHHHHcCCcHHHhhhHhhCCHHHHHHHHHHHHHhcCCCEEEEC
Confidence 9999999999999999998876655543 346788999999998899999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHH
Q 000284 610 EPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSL 668 (1723)
Q Consensus 610 EPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~ 668 (1723)
|||+|||+.+++.++++|++++ +|+|||++||+++++..+||||++|++|++.+.|++.
T Consensus 150 EP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~ 209 (223)
T TIGR03740 150 EPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKIN 209 (223)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChh
Confidence 9999999999999999999986 5899999999999999999999999999999988763
No 343
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-40 Score=376.34 Aligned_cols=205 Identities=30% Similarity=0.431 Sum_probs=180.7
Q ss_pred eEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-----ChHHhcc
Q 000284 1359 NLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-----DPKAARR 1433 (1723)
Q Consensus 1359 ~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-----~~~~~~~ 1433 (1723)
||+|+|++ +.+ |+||+|++ |++||+||||||||||+++|+|+++|++|+|.++|.++.. .....++
T Consensus 5 ~l~~~~~~------~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 75 (214)
T cd03297 5 DIEKRLPD------FTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQR 75 (214)
T ss_pred eeeEecCC------eee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhh
Confidence 99999964 333 99999999 9999999999999999999999999999999999998753 1223567
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000284 1434 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1513 (1723)
Q Consensus 1434 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vl 1513 (1723)
.+||+||++.+++.+|++||+.+..... .....++++.++++.+++.+..++++.+||||||||++||+||+.+|++|
T Consensus 76 ~i~~~~q~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ll 153 (214)
T cd03297 76 KIGLVFQQYALFPHLNVRENLAFGLKRK--RNREDRISVDELLDLLGLDHLLNRYPAQLSGGEKQRVALARALAAQPELL 153 (214)
T ss_pred cEEEEecCCccCCCCCHHHHHHHHHhhC--CHHHHHHHHHHHHHHcCCHhHhhcCcccCCHHHHHHHHHHHHHhcCCCEE
Confidence 8999999999998899999998764322 22234456788999999988889999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000284 1514 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1575 (1723)
Q Consensus 1514 lLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g 1575 (1723)
||||||+|||+.+++.+++.|++++++.| +|||++||++++++.+|||+++|++|++++.|
T Consensus 154 llDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 154 LLDEPFSALDRALRLQLLPELKQIKKNLN-IPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHHHcC-cEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999865434 58999999999999999999999999998765
No 344
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-40 Score=387.26 Aligned_cols=220 Identities=26% Similarity=0.429 Sum_probs=193.5
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCC-----CCcceEEEccccCCc---
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA--- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~--- 519 (1723)
..++++|+++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+.+ |++|+|.++|+++..
T Consensus 20 ~~l~~~~l~~~~~~----~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~ 95 (268)
T PRK14248 20 HILEVKDLSIYYGE----KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNI 95 (268)
T ss_pred ceEEEEEEEEEeCC----ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccc
Confidence 57999999999953 469999999999999999999999999999999999864 799999999998853
Q ss_pred cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHH
Q 000284 520 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVK-EELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLS 594 (1723)
Q Consensus 520 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~v~~~l~~~~l~----~~~~~~~~~LSgGqkqrl~ 594 (1723)
+....++++||+||++.+++. |++||+.+.....+.. ....++.+.++++.+++. +..++++++||||||||++
T Consensus 96 ~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrl~ 174 (268)
T PRK14248 96 NVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVKDRLHSSALSLSGGQQQRLC 174 (268)
T ss_pred cHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchHHHHhcCcccCCHHHHHHHH
Confidence 233567889999999998885 9999998765443332 233456678889999884 4568899999999999999
Q ss_pred HHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 595 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 595 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
|||||+.+|++|||||||+|||+.+++.++++|+++++++|||++||+++++..+||||++|++|+++..|++.++.+
T Consensus 175 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 252 (268)
T PRK14248 175 IARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQIFT 252 (268)
T ss_pred HHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 999999999999999999999999999999999999778899999999999999999999999999999999877643
No 345
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-40 Score=383.97 Aligned_cols=219 Identities=28% Similarity=0.473 Sum_probs=195.0
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCC-----CcceEEEccccCCc---c
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA---D 520 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~---~ 520 (1723)
.|+++||++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.. +
T Consensus 3 ~l~~~~l~~~~~~----~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~ 78 (250)
T PRK14262 3 IIEIENFSAYYGE----KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLD 78 (250)
T ss_pred eEEEEeeEEEeCC----ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhh
Confidence 6899999999953 4699999999999999999999999999999999999984 89999999998753 2
Q ss_pred HHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHcCCCc----ccccccCCCChhHHHHHHH
Q 000284 521 MDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVK-EELLESVVAEMVDEVGLAD----KVNIVVRALSGGMKRKLSL 595 (1723)
Q Consensus 521 ~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~v~~~l~~~~l~~----~~~~~~~~LSgGqkqrl~l 595 (1723)
....++.+||+||++.+++ +|++||+.+.....+.. .+..+++++++++.+|+.+ ..++.+.+||||||||++|
T Consensus 79 ~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~l 157 (250)
T PRK14262 79 VTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKSELNKPGTRLSGGQQQRLCI 157 (250)
T ss_pred HHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHHHHhCChhhcCHHHHHHHHH
Confidence 2345788999999999887 89999998876554433 3345667888999999853 4688999999999999999
Q ss_pred HHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 596 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 596 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
|+||+.+|+++||||||+|||+.+++.++++|+++++++|||++||+++++..+||||++|++|+++..|++.++.+
T Consensus 158 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 234 (250)
T PRK14262 158 ARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREIVE 234 (250)
T ss_pred HHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHHh
Confidence 99999999999999999999999999999999999778999999999999999999999999999999999887754
No 346
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=2e-40 Score=388.19 Aligned_cols=219 Identities=27% Similarity=0.400 Sum_probs=193.9
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCC---cceEEEccccCCc-----
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPT---TGDALVFGKNITA----- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~---~G~i~i~g~~i~~----- 519 (1723)
+.++++||++.|++ +.+++|+||++.+||+++|+||||||||||+++|+|+++|+ +|+|.++|.++..
T Consensus 3 ~~l~~~nl~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~ 78 (262)
T PRK09984 3 TIIRVEKLAKTFNQ----HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLA 78 (262)
T ss_pred cEEEEeeEEEEeCC----eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccc
Confidence 46899999999953 46999999999999999999999999999999999999987 4999999998743
Q ss_pred -cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHh--------cCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHH
Q 000284 520 -DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVL--------KGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMK 590 (1723)
Q Consensus 520 -~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~--------~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqk 590 (1723)
+....++.+||+||++.+++.+||.||+.+.... .+...++.+++++++++.+|+.+..++.+.+||||||
T Consensus 79 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~ 158 (262)
T PRK09984 79 RDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRVSTLSGGQQ 158 (262)
T ss_pred hhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCccccCHHHH
Confidence 2345577899999999999999999999865321 1111234456889999999999888999999999999
Q ss_pred HHHHHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHH
Q 000284 591 RKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSL 668 (1723)
Q Consensus 591 qrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~ 668 (1723)
||++|||||+.+|++|||||||+|||+.+++.++++|++++ +|+|||++||+++++..+||||++|++|++.+.|++.
T Consensus 159 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~g~~~ 238 (262)
T PRK09984 159 QRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQ 238 (262)
T ss_pred HHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999985 3899999999999999999999999999999999876
Q ss_pred HH
Q 000284 669 FL 670 (1723)
Q Consensus 669 ~L 670 (1723)
++
T Consensus 239 ~~ 240 (262)
T PRK09984 239 QF 240 (262)
T ss_pred Hh
Confidence 54
No 347
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-40 Score=383.92 Aligned_cols=220 Identities=30% Similarity=0.460 Sum_probs=194.2
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCC--CC---CcceEEEccccCCc---
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLI--PP---TTGDALVFGKNITA--- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~--~p---~~G~i~i~g~~i~~--- 519 (1723)
..++++||++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+. +| ++|+|.++|.++..
T Consensus 4 ~~l~~~~l~~~~~~----~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~ 79 (252)
T PRK14239 4 PILQVSDLSVYYNK----KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRT 79 (252)
T ss_pred ceEEEEeeEEEECC----eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCccc
Confidence 46899999999953 46999999999999999999999999999999999995 46 59999999998742
Q ss_pred cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHH
Q 000284 520 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVK-EELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLS 594 (1723)
Q Consensus 520 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~v~~~l~~~~l~----~~~~~~~~~LSgGqkqrl~ 594 (1723)
+....|+.+||+||++.+++ +||+||+.+.....+.. .+..++++.++++.+++. +..++.+.+||||||||++
T Consensus 80 ~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~ 158 (252)
T PRK14239 80 DTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKDRLHDSALGLSGGQQQRVC 158 (252)
T ss_pred chHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHHHHhcCcccCCHHHHHHHH
Confidence 23456778999999999887 79999998876555543 334567788899999874 3568899999999999999
Q ss_pred HHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 595 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 595 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
|||||+.+|+++||||||+|||+.+++.++++|+++++++|||++||+++++..+||||++|++|++++.|++.++.+
T Consensus 159 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 236 (252)
T PRK14239 159 IARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQMFM 236 (252)
T ss_pred HHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 999999999999999999999999999999999998777999999999999999999999999999999999877643
No 348
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-40 Score=381.49 Aligned_cols=216 Identities=23% Similarity=0.394 Sum_probs=190.0
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcceE
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 529 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 529 (1723)
++++||+|.|+. + ..|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.... ..++.+|
T Consensus 2 l~~~~l~~~~~~----~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~i~ 74 (232)
T PRK10771 2 LKLTDITWLYHH----L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTP-PSRRPVS 74 (232)
T ss_pred eEEEEEEEEECC----c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCC-hhhccEE
Confidence 789999999953 1 23899999999999999999999999999999999999999999999875321 1356799
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeecc
Q 000284 530 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 609 (1723)
Q Consensus 530 ~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 609 (1723)
|+||++.+++.+|+.||+.+.........+..++++.++++.+|+.+..++++.+||||||||++||+|++.+|+++|||
T Consensus 75 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLD 154 (232)
T PRK10771 75 MLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLPGQLSGGQRQRVALARCLVREQPILLLD 154 (232)
T ss_pred EEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999999999986532111112334667899999999998899999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 610 EPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 610 EPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
|||+|||+.+++.++++|+++. + |+|||++||+++++..+||||++|++|++.+.|++.++.+
T Consensus 155 EP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~ 219 (232)
T PRK10771 155 EPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLS 219 (232)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 9999999999999999999984 3 8999999999999999999999999999999999877653
No 349
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-40 Score=384.64 Aligned_cols=220 Identities=25% Similarity=0.451 Sum_probs=193.6
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCCC--
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIRS-- 1426 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p-----~~G~i~i~G~~i~~-- 1426 (1723)
+++++|++|+|++ +.+|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|+++..
T Consensus 4 ~l~i~~v~~~~~~------~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~ 77 (258)
T PRK14241 4 RIDVKDLNIYYGS------FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPG 77 (258)
T ss_pred cEEEeeEEEEECC------EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccc
Confidence 5899999999963 4599999999999999999999999999999999999974 79999999998742
Q ss_pred -ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCC-ChhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHHH
Q 000284 1427 -DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGV-AEYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRKL 1500 (1723)
Q Consensus 1427 -~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~kqrl 1500 (1723)
.....++.+||++|++.+++.+|++||+.+....++. +....++.+.++++.+++. +..++++.+|||||||||
T Consensus 78 ~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv 157 (258)
T PRK14241 78 VDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKDRLDKPGGGLSGGQQQRL 157 (258)
T ss_pred cChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHHHHHH
Confidence 2345677899999999999999999999876555443 3344556778889999884 467899999999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEE------CCEEEEe
Q 000284 1501 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMV------GGQLRCI 1574 (1723)
Q Consensus 1501 ~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~------~G~l~~~ 1574 (1723)
+|||||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|+ +|++++.
T Consensus 158 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~ 234 (258)
T PRK14241 158 CIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELK-Q-D-YTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEI 234 (258)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-c-C-CEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEec
Confidence 99999999999999999999999999999999999984 3 3 589999999999999999999997 7999999
Q ss_pred cChhHHHh
Q 000284 1575 GSPQHLKT 1582 (1723)
Q Consensus 1575 g~~~~l~~ 1582 (1723)
|+++++..
T Consensus 235 ~~~~~~~~ 242 (258)
T PRK14241 235 DDTEKIFS 242 (258)
T ss_pred CCHHHHHh
Confidence 99988754
No 350
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-40 Score=382.63 Aligned_cols=221 Identities=24% Similarity=0.396 Sum_probs=193.2
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC--C---CceEEEEcCeeCCC-
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY--P---TDGTAFIFGKDIRS- 1426 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~--p---~~G~i~i~G~~i~~- 1426 (1723)
..|+++|++|+|++ +.+++|+||+|++||++||+|+||||||||+++|+|+++ | ++|+|.++|+++..
T Consensus 3 ~~l~~~nl~~~~~~------~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~ 76 (252)
T PRK14256 3 NKVKLEQLNVHFGK------NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDR 76 (252)
T ss_pred cEEEEEEEEEEeCC------eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccc
Confidence 36899999999963 459999999999999999999999999999999999986 4 69999999999853
Q ss_pred --ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCC-ChhhHHHHHHHHHHHcCCcc----ccCCCCCCCChhHHHH
Q 000284 1427 --DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGV-AEYRMDDVVMEKLVEFDLLK----HAKKPSFTLSGGNKRK 1499 (1723)
Q Consensus 1427 --~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~~~~~l~~~~l~~----~~~~~~~~LSgG~kqr 1499 (1723)
.....++.+||+||++.+++.+|++||+.+.....+. ...+.++++.++++.+++.. ..++.+.+||||||||
T Consensus 77 ~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qr 156 (252)
T PRK14256 77 GVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDRLKSNAMELSGGQQQR 156 (252)
T ss_pred cCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcCcCCHHHHHH
Confidence 2335677899999999999989999999875544442 33344566788899999853 4678899999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000284 1500 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1579 (1723)
Q Consensus 1500 l~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~ 1579 (1723)
++|||||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|++|++++.|++++
T Consensus 157 l~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~-~-~-~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 233 (252)
T PRK14256 157 LCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELK-E-K-YTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETKK 233 (252)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH-h-C-CcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999999985 3 3 589999999999999999999999999999999988
Q ss_pred HHh
Q 000284 1580 LKT 1582 (1723)
Q Consensus 1580 l~~ 1582 (1723)
+..
T Consensus 234 ~~~ 236 (252)
T PRK14256 234 IFT 236 (252)
T ss_pred HHh
Confidence 754
No 351
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.9e-40 Score=376.35 Aligned_cols=210 Identities=26% Similarity=0.449 Sum_probs=186.1
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcceE
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 529 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 529 (1723)
++++||+|.|+. .++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...++.+|
T Consensus 1 ~~~~~l~~~~~~------~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~i~ 73 (213)
T TIGR01277 1 LALDKVRYEYEH------LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGL-APYQRPVS 73 (213)
T ss_pred CeEEeeeEEeCC------cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccC-ChhccceE
Confidence 368999999941 46799999999999999999999999999999999999999999999987532 23567899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeecc
Q 000284 530 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 609 (1723)
Q Consensus 530 ~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 609 (1723)
|+||++.+++.+|+.||+.+............+++++++++.+|+.+..++.+.+||||||||++|||||+.+|+++|||
T Consensus 74 ~v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~llllD 153 (213)
T TIGR01277 74 MLFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLPEQLSGGQRQRVALARCLVRPNPILLLD 153 (213)
T ss_pred EEeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999999999999986543211112234567889999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecC
Q 000284 610 EPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGS 666 (1723)
Q Consensus 610 EPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs 666 (1723)
|||+|||+.+++.++++|++++ + ++|||++||+++++..+|||+++|++|++.+.|.
T Consensus 154 EPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 154 EPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 9999999999999999999985 3 8999999999999999999999999999998774
No 352
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-40 Score=376.27 Aligned_cols=203 Identities=31% Similarity=0.467 Sum_probs=181.7
Q ss_pred eEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-----cHHHHhcce
Q 000284 454 KLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-----DMDEIRKGL 528 (1723)
Q Consensus 454 ~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-----~~~~~r~~i 528 (1723)
||+|+|++ +.+ |+||++++ |+++|+||||||||||+++|+|+++|++|+|.++|.++.. +....++.+
T Consensus 5 ~l~~~~~~----~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 77 (214)
T cd03297 5 DIEKRLPD----FTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQRKI 77 (214)
T ss_pred eeeEecCC----eee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhhcE
Confidence 89999964 234 99999999 9999999999999999999999999999999999988742 233457789
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeec
Q 000284 529 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVIL 608 (1723)
Q Consensus 529 g~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliL 608 (1723)
||+||++.+++.+|+.||+.+..... .....++++.++++.+|+.+..++++.+||||||||++||+||+.+|+++||
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llll 155 (214)
T cd03297 78 GLVFQQYALFPHLNVRENLAFGLKRK--RNREDRISVDELLDLLGLDHLLNRYPAQLSGGEKQRVALARALAAQPELLLL 155 (214)
T ss_pred EEEecCCccCCCCCHHHHHHHHHhhC--CHHHHHHHHHHHHHHcCCHhHhhcCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999999998765322 2334456789999999999888999999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEec
Q 000284 609 DEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 665 (1723)
Q Consensus 609 DEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~G 665 (1723)
||||+|||+.+++.++++|++++ + |+|||++||++++++.+|||+++|++|++++.|
T Consensus 156 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 156 DEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999985 3 899999999999999999999999999998765
No 353
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=5.4e-40 Score=383.59 Aligned_cols=223 Identities=22% Similarity=0.365 Sum_probs=192.1
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCee-----CCCC
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKD-----IRSD 1427 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~-----i~~~ 1427 (1723)
.+|+++|+++.|++ +.+++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.+ +...
T Consensus 5 ~~l~~~~l~~~~~~------~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~ 78 (258)
T PRK11701 5 PLLSVRGLTKLYGP------RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYAL 78 (258)
T ss_pred ceEEEeeeEEEcCC------ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccC
Confidence 47999999999953 459999999999999999999999999999999999999999999999998 6542
Q ss_pred -hHH----hccceEEEecCC--CCCCCCCHHHHHHHHHHHcCC-ChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHH
Q 000284 1428 -PKA----ARRLIGYCPQFD--ALLEYLTVQEHLELYARIKGV-AEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKR 1498 (1723)
Q Consensus 1428 -~~~----~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~kq 1498 (1723)
... .++.+||+||++ .+++.+|+.||+.+.....+. ...+.++.+.++++.+++. +..++++.+|||||||
T Consensus 79 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~Gq~q 158 (258)
T PRK11701 79 SEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDAARIDDLPTTFSGGMQQ 158 (258)
T ss_pred CHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCChhHHhCCCccCCHHHHH
Confidence 222 356799999996 466778999998754322221 2234456778899999997 4788999999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChh
Q 000284 1499 KLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQ 1578 (1723)
Q Consensus 1499 rl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~ 1578 (1723)
|++|||||+.+|+||||||||+|||+.+++.+++.|++++++.| .|||++||+++++..+|||+++|++|+++..|+++
T Consensus 159 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~~~ 237 (258)
T PRK11701 159 RLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELG-LAVVIVTHDLAVARLLAHRLLVMKQGRVVESGLTD 237 (258)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-cEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999864434 68999999999999999999999999999999998
Q ss_pred HHHh
Q 000284 1579 HLKT 1582 (1723)
Q Consensus 1579 ~l~~ 1582 (1723)
++.+
T Consensus 238 ~~~~ 241 (258)
T PRK11701 238 QVLD 241 (258)
T ss_pred HHhc
Confidence 8754
No 354
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=3e-40 Score=377.49 Aligned_cols=210 Identities=35% Similarity=0.540 Sum_probs=188.1
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1434 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~~ 1434 (1723)
|+++|++|.|++ +.+++++||++++||++||+||||||||||+++|+|+++|++|+|.++|.++... .++.
T Consensus 1 l~l~~v~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~---~~~~ 71 (223)
T TIGR03740 1 LETKNLSKRFGK------QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRK---DLHK 71 (223)
T ss_pred CEEEeEEEEECC------EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccc---cccc
Confidence 468999999953 4699999999999999999999999999999999999999999999999987532 1357
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000284 1435 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1514 (1723)
Q Consensus 1435 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vll 1514 (1723)
+||+||++.+++.+|++||+.++....+.+ ++.+.++++.+++.+..++++.+||||||||++||||++.+|++|+
T Consensus 72 ~~~~~q~~~~~~~~t~~~~~~~~~~~~~~~----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~~rv~laral~~~p~lll 147 (223)
T TIGR03740 72 IGSLIESPPLYENLTARENLKVHTTLLGLP----DSRIDEVLNIVDLTNTGKKKAKQFSLGMKQRLGIAIALLNHPKLLI 147 (223)
T ss_pred EEEEcCCCCccccCCHHHHHHHHHHHcCCC----HHHHHHHHHHcCCcHHHhhhHhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999999999888899999998876655533 2456788999999988999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000284 1515 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1579 (1723)
Q Consensus 1515 LDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~ 1579 (1723)
|||||+|||+.+++.+++.|++++ ++| .|||++||+++++..+|||+++|++|++++.|++.+
T Consensus 148 lDEP~~~LD~~~~~~l~~~L~~~~-~~~-~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 148 LDEPTNGLDPIGIQELRELIRSFP-EQG-ITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred ECCCccCCCHHHHHHHHHHHHHHH-HCC-CEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 999999999999999999999985 344 589999999999999999999999999999998653
No 355
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-40 Score=382.23 Aligned_cols=220 Identities=22% Similarity=0.396 Sum_probs=193.2
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCCC-
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIRS- 1426 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p-----~~G~i~i~G~~i~~- 1426 (1723)
++|+++|+++.|++ +.+++|+||+|++||++||+|+||||||||+++|+|+.+| ++|+|.++|.++..
T Consensus 3 ~~l~~~~l~~~~~~------~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~ 76 (251)
T PRK14270 3 IKMESKNLNLWYGE------KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDK 76 (251)
T ss_pred cEEEEEEeEEEECC------eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccc
Confidence 57899999999952 4599999999999999999999999999999999999875 89999999999853
Q ss_pred --ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCC-hhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHH
Q 000284 1427 --DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVA-EYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRK 1499 (1723)
Q Consensus 1427 --~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~kqr 1499 (1723)
.....++.+||+||++.+++ +|++||+.+.....+.. ..+.++++.++++.+++. +..++++.+||||||||
T Consensus 77 ~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qr 155 (251)
T PRK14270 77 DVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKDDLKKSALKLSGGQQQR 155 (251)
T ss_pred cccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHHHHH
Confidence 22345778999999998887 89999998766555542 334455677889999874 45788999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000284 1500 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1579 (1723)
Q Consensus 1500 l~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~ 1579 (1723)
++||+||+.+|+||||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|++|++++.|++++
T Consensus 156 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~-~-~-~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 232 (251)
T PRK14270 156 LCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELK-K-E-YTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEK 232 (251)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHH-h-C-CeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHH
Confidence 999999999999999999999999999999999999985 3 3 589999999999999999999999999999999988
Q ss_pred HHh
Q 000284 1580 LKT 1582 (1723)
Q Consensus 1580 l~~ 1582 (1723)
+..
T Consensus 233 ~~~ 235 (251)
T PRK14270 233 IFL 235 (251)
T ss_pred Hhc
Confidence 753
No 356
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-40 Score=383.41 Aligned_cols=219 Identities=30% Similarity=0.461 Sum_probs=194.4
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCC-----CCcceEEEccccCCc---c
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA---D 520 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~---~ 520 (1723)
.|+++|+++.|+. +.+++|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.. +
T Consensus 4 ~l~~~~l~~~~~~----~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~ 79 (251)
T PRK14251 4 IISAKDVHLSYGN----YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMD 79 (251)
T ss_pred eEEEEeeEEEECC----eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccch
Confidence 6899999999953 469999999999999999999999999999999999997 489999999998743 2
Q ss_pred HHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHHH
Q 000284 521 MDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVK-EELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLSL 595 (1723)
Q Consensus 521 ~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~v~~~l~~~~l~----~~~~~~~~~LSgGqkqrl~l 595 (1723)
....++.+||++|++.+++ .||+||+.+.....+.. .+..+++++++++.+++. +..++.+.+||||||||++|
T Consensus 80 ~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~l 158 (251)
T PRK14251 80 LVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETKDNLDRNAQAFSGGQQQRICI 158 (251)
T ss_pred HHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchHHHhccChhhCCHHHHHHHHH
Confidence 3456788999999998886 79999998765554443 334556788999999984 45688899999999999999
Q ss_pred HHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 596 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 596 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
||||+.+|+++||||||+|||+.+++.+++.|+++++++|||++||+++++..+||||++|++|++++.|++.++..
T Consensus 159 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 235 (251)
T PRK14251 159 ARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEMFI 235 (251)
T ss_pred HHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999778999999999999999999999999999999999877643
No 357
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-40 Score=381.38 Aligned_cols=219 Identities=25% Similarity=0.432 Sum_probs=192.5
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC---CCceEEEEcCeeCCC-ChH
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY---PTDGTAFIFGKDIRS-DPK 1429 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~---p~~G~i~i~G~~i~~-~~~ 1429 (1723)
+++++|+++.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++ |++|+|.++|+++.. ...
T Consensus 2 ~~~~~~l~~~~~~------~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~ 75 (246)
T PRK14269 2 IAKTTNLNLFYGK------KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVV 75 (246)
T ss_pred ceeeeeeEEEECC------EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHH
Confidence 5789999999963 469999999999999999999999999999999999974 799999999999865 334
Q ss_pred HhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCC--hhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHHHHHH
Q 000284 1430 AARRLIGYCPQFDALLEYLTVQEHLELYARIKGVA--EYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRKLSVA 1503 (1723)
Q Consensus 1430 ~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~--~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~kqrl~iA 1503 (1723)
..++.|||+||++.+++ .|++||+.+....++.. ....++++.++++.+++. +..++++.+||||||||++||
T Consensus 76 ~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la 154 (246)
T PRK14269 76 ALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLKQNALALSGGQQQRLCIA 154 (246)
T ss_pred HHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHHhcCCcccCCHHHHHHHHHH
Confidence 56778999999998887 69999998865554432 233445677899999995 346888999999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1504 IAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1504 ~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
|||+.+|++|||||||+|||+.+++.+.+.|+++. + + +|||++||+++++..+|||+++|++|++++.|+++++.+
T Consensus 155 ral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~-~-~-~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 230 (246)
T PRK14269 155 RALAIKPKLLLLDEPTSALDPISSGVIEELLKELS-H-N-LSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFE 230 (246)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh-C-C-CEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999999999984 3 4 589999999999999999999999999999999988754
No 358
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=5.9e-40 Score=378.56 Aligned_cols=189 Identities=24% Similarity=0.359 Sum_probs=152.4
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1433 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~ 1433 (1723)
.++-.+++|.|++ . .|+==.=++..||++|++||||-||||+.++|+|.++|++|. ..+ -
T Consensus 342 lv~y~~~~k~~g~------F-~L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikPdeg~----~~~---------~ 401 (591)
T COG1245 342 LVEYPDLKKTYGD------F-KLEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKPDEGS----EED---------L 401 (591)
T ss_pred eeecchheeecCc------e-EEEecCCeeecceEEEEECCCCcchHHHHHHHhccccCCCCC----Ccc---------c
Confidence 3455567777752 1 233223356789999999999999999999999999999997 222 2
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000284 1434 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1513 (1723)
Q Consensus 1434 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vl 1513 (1723)
+|+|=||.-.-..+.||++.|.-..+-. ..... .-.++++-++|++..++++.+||||+.|||+||.||..++++.
T Consensus 402 ~vSyKPQyI~~~~~gtV~~~l~~~~~~~-~~~s~---~~~ei~~pl~l~~i~e~~v~~LSGGELQRvaIaa~L~reADlY 477 (591)
T COG1245 402 KVSYKPQYISPDYDGTVEDLLRSAIRSA-FGSSY---FKTEIVKPLNLEDLLERPVDELSGGELQRVAIAAALSREADLY 477 (591)
T ss_pred eEeecceeecCCCCCcHHHHHHHhhhhh-cccch---hHHhhcCccchHHHHhcccccCCchhHHHHHHHHHhccccCEE
Confidence 4899999855446689999775433221 22221 2346788899999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEE
Q 000284 1514 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMV 1567 (1723)
Q Consensus 1514 lLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~ 1567 (1723)
+||||++.||.+.|-.+-+.|+++.... +.|.+++-||+-.++-++||+++..
T Consensus 478 llDEPSA~LDvEqR~~vakvIRR~~e~~-~kta~vVdHDi~~~dyvsDr~ivF~ 530 (591)
T COG1245 478 LLDEPSAYLDVEQRIIVAKVIRRFIENN-EKTALVVDHDIYMIDYVSDRLIVFE 530 (591)
T ss_pred EecCchhhccHHHHHHHHHHHHHHHhhc-CceEEEEecceehhhhhhceEEEEe
Confidence 9999999999999999999999997555 4689999999999999999999885
No 359
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-40 Score=383.40 Aligned_cols=221 Identities=28% Similarity=0.408 Sum_probs=196.0
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcc------ccCCc-c
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFG------KNITA-D 520 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g------~~i~~-~ 520 (1723)
+.+.++|++|+|++ +.+++|+||++.+||+++|+|+||||||||+++|+|+++|++|+|.++| .++.. .
T Consensus 9 ~~i~~~~~~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~ 84 (257)
T PRK14246 9 DVFNISRLYLYIND----KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQID 84 (257)
T ss_pred hheeeeeEEEecCC----ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCC
Confidence 57999999999953 4699999999999999999999999999999999999999997777665 44432 3
Q ss_pred HHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHHH
Q 000284 521 MDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLSL 595 (1723)
Q Consensus 521 ~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~v~~~l~~~~l~----~~~~~~~~~LSgGqkqrl~l 595 (1723)
....|+.+||+||++.+++.+|++||+.+....++. +.++.++++.++++.+++. +..++.+..||||||||++|
T Consensus 85 ~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrl~l 164 (257)
T PRK14246 85 AIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVYDRLNSPASQLSGGQQQRLTI 164 (257)
T ss_pred HHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccchhhhcCCcccCCHHHHHHHHH
Confidence 445678899999999999999999999987655443 3445667889999999996 35688999999999999999
Q ss_pred HHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 596 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 596 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
||||+.+|+++||||||+|||+.++++++++|.++++++|||++||+++++..+|||+++|++|++++.|++.++.+
T Consensus 165 aral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~~~ 241 (257)
T PRK14246 165 ARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEIFT 241 (257)
T ss_pred HHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999999999998778999999999999999999999999999999999877653
No 360
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-40 Score=386.08 Aligned_cols=220 Identities=25% Similarity=0.434 Sum_probs=191.1
Q ss_pred cceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeCCC
Q 000284 1352 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDIRS 1426 (1723)
Q Consensus 1352 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~-----p~~G~i~i~G~~i~~ 1426 (1723)
..+|+++|++++|++ +.+++|+||+|++||++||+||||||||||+++|+|+++ |++|+|.++|.++..
T Consensus 11 ~~~l~i~nl~~~~~~------~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~ 84 (269)
T PRK14259 11 NIIISLQNVTISYGT------FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYD 84 (269)
T ss_pred CceEEEEeEEEEECC------EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccc
Confidence 357999999999953 469999999999999999999999999999999999987 699999999998742
Q ss_pred ---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHH
Q 000284 1427 ---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRK 1499 (1723)
Q Consensus 1427 ---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~kqr 1499 (1723)
.....++++||+||++.+++ .|++||+.+.....+... ..++.+.++++.+++. +..++++.+||||||||
T Consensus 85 ~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qr 162 (269)
T PRK14259 85 PRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARINGYTG-DMDELVERSLRKAAVWDECKDKLNESGYSLSGGQQQR 162 (269)
T ss_pred ccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcCCcH-HHHHHHHHHHHHhCCcchhhhhhCCCcccCCHHHHHH
Confidence 34456778999999998887 599999988765555432 2345667788888763 45788999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEEC-----------
Q 000284 1500 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVG----------- 1568 (1723)
Q Consensus 1500 l~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~----------- 1568 (1723)
|+|||||+.+|++|||||||+|||+.+++.++++|++++ + + +|||++||++++++.+|||+++|++
T Consensus 163 l~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~-~-~-~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~ 239 (269)
T PRK14259 163 LCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELK-K-N-FTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKV 239 (269)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-c-C-CEEEEEeCCHHHHHHhcCEEEEEecccccccccccc
Confidence 999999999999999999999999999999999999984 3 4 5899999999999999999999996
Q ss_pred CEEEEecChhHHHh
Q 000284 1569 GQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1569 G~l~~~g~~~~l~~ 1582 (1723)
|++++.|+++++.+
T Consensus 240 g~~~~~~~~~~~~~ 253 (269)
T PRK14259 240 GYLVEFNETKKIFN 253 (269)
T ss_pred ceEEEeCCHHHHHh
Confidence 67899999888754
No 361
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-40 Score=376.95 Aligned_cols=230 Identities=24% Similarity=0.404 Sum_probs=201.0
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-C----CceEEEEcCeeCCCC-
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-P----TDGTAFIFGKDIRSD- 1427 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~-p----~~G~i~i~G~~i~~~- 1427 (1723)
+|+++||+..|.... +...||+||||+|++||++||+|.+|||||||.+.|.|+++ | .+|+|.++|+++.+-
T Consensus 1 lL~v~nL~v~f~~~~--g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~ 78 (316)
T COG0444 1 LLEVKNLSVSFPTDA--GVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLS 78 (316)
T ss_pred CceEeeeEEEEecCC--ccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCC
Confidence 378999999997532 34679999999999999999999999999999999999998 4 579999999998653
Q ss_pred hH---Hh-ccceEEEecCC--CCCCCCCHHHHHHHHHHHcC-C-ChhhHHHHHHHHHHHcCCcc---ccCCCCCCCChhH
Q 000284 1428 PK---AA-RRLIGYCPQFD--ALLEYLTVQEHLELYARIKG-V-AEYRMDDVVMEKLVEFDLLK---HAKKPSFTLSGGN 1496 (1723)
Q Consensus 1428 ~~---~~-~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g-~-~~~~~~~~~~~~l~~~~l~~---~~~~~~~~LSgG~ 1496 (1723)
.+ +. .+.|+|+||++ +|.|-+|+.+.+.-..+.++ . .+++..+++.++|+.+|+.+ ..+.++.+|||||
T Consensus 79 ~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YPhelSGGM 158 (316)
T COG0444 79 EKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERRLKSYPHELSGGM 158 (316)
T ss_pred HHHHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHHHHhhCCcccCCcH
Confidence 22 22 35799999995 78899999998876665443 3 45667788999999999974 5789999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecC
Q 000284 1497 KRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGS 1576 (1723)
Q Consensus 1497 kqrl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~ 1576 (1723)
||||.||.||+.+|++||.||||++||...+.++.++|++++++.| +|+|++|||+..+..+||||+||..|++++.|+
T Consensus 159 rQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~-~aiilITHDl~vva~~aDri~VMYaG~iVE~g~ 237 (316)
T COG0444 159 RQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKG-TALILITHDLGVVAEIADRVAVMYAGRIVEEGP 237 (316)
T ss_pred HHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhcceEEEEECcEEEEeCC
Confidence 9999999999999999999999999999999999999999986555 799999999999999999999999999999999
Q ss_pred hhHHHhhcCC
Q 000284 1577 PQHLKTRFGN 1586 (1723)
Q Consensus 1577 ~~~l~~~~~~ 1586 (1723)
.+++...-..
T Consensus 238 ~~~i~~~P~H 247 (316)
T COG0444 238 VEEIFKNPKH 247 (316)
T ss_pred HHHHhcCCCC
Confidence 9998765433
No 362
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=3.9e-40 Score=381.74 Aligned_cols=219 Identities=21% Similarity=0.309 Sum_probs=188.7
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCC--CCCceEEEEcCeeCCCC-hHH-
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEE--YPTDGTAFIFGKDIRSD-PKA- 1430 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~--~p~~G~i~i~G~~i~~~-~~~- 1430 (1723)
|+++||+|+|++ +.+++|+||+|++||++||+||||||||||+++|+|++ +|++|+|.++|+++... ...
T Consensus 1 l~~~~l~~~~~~------~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~ 74 (243)
T TIGR01978 1 LKIKDLHVSVED------KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDER 74 (243)
T ss_pred CeEeeEEEEECC------EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHh
Confidence 468999999953 46999999999999999999999999999999999995 79999999999988652 222
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHcC-------CChhhHHHHHHHHHHHcCCc-cccCCCCC-CCChhHHHHHH
Q 000284 1431 ARRLIGYCPQFDALLEYLTVQEHLELYARIKG-------VAEYRMDDVVMEKLVEFDLL-KHAKKPSF-TLSGGNKRKLS 1501 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g-------~~~~~~~~~~~~~l~~~~l~-~~~~~~~~-~LSgG~kqrl~ 1501 (1723)
.+..++|+||++.+++.+|++|++.+...... ....+..+++.++++.+++. +..++++. +|||||||||+
T Consensus 75 ~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrl~ 154 (243)
T TIGR01978 75 ARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVNEGFSGGEKKRNE 154 (243)
T ss_pred hccceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccccCcCHHHHHHHH
Confidence 34559999999999999999999987543221 12223345678899999997 46788887 59999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHH-cCEEEEEECCEEEEecChhHH
Q 000284 1502 VAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQAL-CTRIGIMVGGQLRCIGSPQHL 1580 (1723)
Q Consensus 1502 iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l-~drv~im~~G~l~~~g~~~~l 1580 (1723)
||+||+.+|++|||||||+|||+.+++.+++.|+++++ +| +|||++||++++++.+ |||+++|++|++++.|+++++
T Consensus 155 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (243)
T TIGR01978 155 ILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE-PD-RSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVELA 232 (243)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-CC-cEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHHHh
Confidence 99999999999999999999999999999999999853 44 5899999999999998 899999999999999998865
Q ss_pred H
Q 000284 1581 K 1581 (1723)
Q Consensus 1581 ~ 1581 (1723)
.
T Consensus 233 ~ 233 (243)
T TIGR01978 233 K 233 (243)
T ss_pred c
Confidence 5
No 363
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-40 Score=384.13 Aligned_cols=222 Identities=24% Similarity=0.410 Sum_probs=191.5
Q ss_pred CcceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeCC
Q 000284 1351 DNAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDIR 1425 (1723)
Q Consensus 1351 ~~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~-----p~~G~i~i~G~~i~ 1425 (1723)
.+++++++|++|+|++ +.+++|+||+|++||++||+|+||||||||+++|+|+.+ |++|+|.++|+++.
T Consensus 18 ~~~~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~ 91 (268)
T PRK14248 18 KEHILEVKDLSIYYGE------KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNIL 91 (268)
T ss_pred CCceEEEEEEEEEeCC------ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcc
Confidence 3468999999999953 459999999999999999999999999999999999864 79999999999985
Q ss_pred C---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCCh-hhHHHHHHHHHHHcCCc----cccCCCCCCCChhHH
Q 000284 1426 S---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAE-YRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNK 1497 (1723)
Q Consensus 1426 ~---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~-~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~k 1497 (1723)
. .....++++||+||++.+++. |++||+.+.....+... ...++.+.+.++.+++. +..++++++||||||
T Consensus 92 ~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~ 170 (268)
T PRK14248 92 DSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVKDRLHSSALSLSGGQQ 170 (268)
T ss_pred cccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchHHHHhcCcccCCHHHH
Confidence 3 223457789999999988874 99999987644433322 22345567788888874 456899999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecCh
Q 000284 1498 RKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSP 1577 (1723)
Q Consensus 1498 qrl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~ 1577 (1723)
||++|||||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|++|+++..|++
T Consensus 171 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~ 247 (268)
T PRK14248 171 QRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELK-E-E-YSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQT 247 (268)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHh-c-C-CEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999999999984 3 3 5899999999999999999999999999999999
Q ss_pred hHHHh
Q 000284 1578 QHLKT 1582 (1723)
Q Consensus 1578 ~~l~~ 1582 (1723)
+++.+
T Consensus 248 ~~~~~ 252 (268)
T PRK14248 248 EQIFT 252 (268)
T ss_pred HHHHh
Confidence 88754
No 364
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-40 Score=346.92 Aligned_cols=215 Identities=25% Similarity=0.454 Sum_probs=198.7
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcce
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGL 528 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~i 528 (1723)
.+.+.+++-+|+++. +.+++|+|++|.+||.++++||+|||||||+|+++|+.+|+.|+|.++|..|+.+-. .=
T Consensus 3 ~l~~~~~sl~y~g~~--~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~~G~i~l~~r~i~gPga----er 76 (259)
T COG4525 3 MLNVSHLSLSYEGKP--RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPSRGSIQLNGRRIEGPGA----ER 76 (259)
T ss_pred eeehhheEEecCCcc--hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcccceEEECCEeccCCCc----cc
Confidence 467788999997653 569999999999999999999999999999999999999999999999998864321 24
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeec
Q 000284 529 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVIL 608 (1723)
Q Consensus 529 g~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliL 608 (1723)
|+|+|++.|+|.+|+.||++|+.++.|+++.+..+.+.+++..+||++..++.+.+||||||||+.|||||+.+|++|+|
T Consensus 77 gvVFQ~~~LlPWl~~~dNvafgL~l~Gi~k~~R~~~a~q~l~~VgL~~~~~~~i~qLSGGmrQRvGiARALa~eP~~LlL 156 (259)
T COG4525 77 GVVFQNEALLPWLNVIDNVAFGLQLRGIEKAQRREIAHQMLALVGLEGAEHKYIWQLSGGMRQRVGIARALAVEPQLLLL 156 (259)
T ss_pred eeEeccCccchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCcccccccceEeecchHHHHHHHHHHhhcCcceEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHH-h-CCcEEEEEcCCHHHHHhhcCEEEEEe--CCEEEEecCHHH
Q 000284 609 DEPTSGMDPYSMRLTWQLIKKI-K-KGRIILLTTHSMDEAEELGDRIAIMA--NGSLKCCGSSLF 669 (1723)
Q Consensus 609 DEPtsgLD~~~r~~l~~~l~~~-~-~~~tiil~TH~~~e~~~l~dri~il~--~G~l~~~Gs~~~ 669 (1723)
|||.++||.-.|+++.++|.++ + .|+.++++||+++||.-+++|+++|+ .|+++..=++.+
T Consensus 157 DEPfgAlDa~tRe~mQelLldlw~~tgk~~lliTH~ieEAlflatrLvvlsp~pgRvv~~~~~df 221 (259)
T COG4525 157 DEPFGALDALTREQMQELLLDLWQETGKQVLLITHDIEEALFLATRLVVLSPGPGRVVERLPLDF 221 (259)
T ss_pred cCchhhHHHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHhhhheeEEecCCCceeeEecCCCH
Confidence 9999999999999999999886 3 48999999999999999999999999 689987766654
No 365
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-40 Score=384.36 Aligned_cols=219 Identities=26% Similarity=0.395 Sum_probs=195.7
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCC-----CCcceEEEccccCCc---
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA--- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~--- 519 (1723)
..|+++||++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++..
T Consensus 19 ~~l~~~nl~~~~~~----~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 94 (267)
T PRK14237 19 IALSTKDLHVYYGK----KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEI 94 (267)
T ss_pred eEEEEeeEEEEECC----eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccC
Confidence 47999999999953 469999999999999999999999999999999999996 589999999998842
Q ss_pred cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHH
Q 000284 520 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLS 594 (1723)
Q Consensus 520 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~v~~~l~~~~l~----~~~~~~~~~LSgGqkqrl~ 594 (1723)
+....|+.+||+||++.+++ .||+||+.+.....+. .++..++++.++++.++|. +..++++.+||||||||++
T Consensus 95 ~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrl~ 173 (267)
T PRK14237 95 NVYEMRKHIGMVFQRPNPFA-KSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVKDDLHKSALTLSGGQQQRLC 173 (267)
T ss_pred ChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhhhhcCCcccCCHHHHHHHH
Confidence 24456788999999998887 5999999886554443 3445667788999999985 3568899999999999999
Q ss_pred HHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 595 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 595 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
|||||+.+|+++||||||+|||+.+++.+.++|+++++++|||++||+++++..+|||+++|++|++++.|++.++.
T Consensus 174 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 174 IARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNIF 250 (267)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999999999999987899999999999999999999999999999999987764
No 366
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-40 Score=381.45 Aligned_cols=220 Identities=26% Similarity=0.397 Sum_probs=195.0
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCC-----cceEEEccccCCc---
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPT-----TGDALVFGKNITA--- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~-----~G~i~i~g~~i~~--- 519 (1723)
+.++++||++.|++ +.+++|+||+|.+||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++..
T Consensus 3 ~~l~~~~l~~~~~~----~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~ 78 (251)
T PRK14249 3 PKIKIRGVNFFYHK----HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNL 78 (251)
T ss_pred ceEEEEEEEEEECC----eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEcccccc
Confidence 36899999999953 45999999999999999999999999999999999999997 6999999998753
Q ss_pred cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHH
Q 000284 520 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVK-EELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLS 594 (1723)
Q Consensus 520 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~v~~~l~~~~l~----~~~~~~~~~LSgGqkqrl~ 594 (1723)
+....|+.+||+||++.+++. |++||+.+....++.. .++.+++++++++.+++. +..++.+.+||||||||++
T Consensus 79 ~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qrv~ 157 (251)
T PRK14249 79 DVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKDNLHKSGLALSGGQQQRLC 157 (251)
T ss_pred ChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhhHhhCCcccCCHHHHHHHH
Confidence 234567889999999999875 9999999876555543 234456778888888874 4578899999999999999
Q ss_pred HHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 595 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 595 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
|||||+.+|+++||||||+|||+.++++++++|+++++++|||++||+++++..+||||++|++|++.+.|++.++..
T Consensus 158 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 235 (251)
T PRK14249 158 IARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEIFS 235 (251)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 999999999999999999999999999999999998778999999999999999999999999999999999877754
No 367
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-40 Score=380.07 Aligned_cols=220 Identities=24% Similarity=0.392 Sum_probs=191.6
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCC---CCC--CceEEEEcCeeCCCC
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGE---EYP--TDGTAFIFGKDIRSD 1427 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~---~~p--~~G~i~i~G~~i~~~ 1427 (1723)
++|+++|++|.|++ +.+++|+||+|++||++||+||||||||||+++|+|+ .+| ++|+|.++|+++...
T Consensus 2 ~~l~~~~~~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~ 75 (250)
T PRK14245 2 VKIDARDVNFWYGD------FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDK 75 (250)
T ss_pred cEEEEEEEEEEECC------EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccc
Confidence 47899999999953 4599999999999999999999999999999999997 455 589999999988542
Q ss_pred ---hHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCCh-hhHHHHHHHHHHHcCCcc----ccCCCCCCCChhHHHH
Q 000284 1428 ---PKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAE-YRMDDVVMEKLVEFDLLK----HAKKPSFTLSGGNKRK 1499 (1723)
Q Consensus 1428 ---~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~-~~~~~~~~~~l~~~~l~~----~~~~~~~~LSgG~kqr 1499 (1723)
....++.+||+||++.+++ .|+.||+.+....++... ...++.+.++++.+++.+ ..++++.+||||||||
T Consensus 76 ~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qr 154 (250)
T PRK14245 76 GVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKDKLKESAFALSGGQQQR 154 (250)
T ss_pred cccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhhhhhCCcccCCHHHHHH
Confidence 2456778999999988887 699999987655554432 234566788899999853 4688999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000284 1500 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1579 (1723)
Q Consensus 1500 l~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~ 1579 (1723)
++|||||+.+|++|||||||+|||+.+++.+++.|+++. + + +|||++||+++++..+|||+++|++|+++..|++++
T Consensus 155 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~ 231 (250)
T PRK14245 155 LCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-K-D-YTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKK 231 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c-C-CeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999999999999999984 3 4 589999999999999999999999999999999998
Q ss_pred HHh
Q 000284 1580 LKT 1582 (1723)
Q Consensus 1580 l~~ 1582 (1723)
+.+
T Consensus 232 ~~~ 234 (250)
T PRK14245 232 IFT 234 (250)
T ss_pred Hhc
Confidence 864
No 368
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-40 Score=387.43 Aligned_cols=220 Identities=25% Similarity=0.393 Sum_probs=194.5
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCC-----CCcceEEEccccCCc---
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA--- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~--- 519 (1723)
+.++++||++.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+.+ |++|+|.++|.++..
T Consensus 38 ~~l~~~~l~~~~~~----~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~ 113 (286)
T PRK14275 38 PHVVAKNFSIYYGE----FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFT 113 (286)
T ss_pred eEEEEeeeEEEECC----EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhccc
Confidence 57999999999953 359999999999999999999999999999999999864 599999999998752
Q ss_pred cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHH
Q 000284 520 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVK-EELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLS 594 (1723)
Q Consensus 520 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~v~~~l~~~~l~----~~~~~~~~~LSgGqkqrl~ 594 (1723)
.....|+.+||+||++.+++. ||.||+.+.....+.. ....++++.++++.+|+. +..++.+.+||||||||++
T Consensus 114 ~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~ 192 (286)
T PRK14275 114 DEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVSDRLDKNALGLSGGQQQRLC 192 (286)
T ss_pred chHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchhhHhhCChhhCCHHHHHHHH
Confidence 223467889999999988875 9999999876555543 334556788899999873 4668899999999999999
Q ss_pred HHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 595 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 595 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
|||||+.+|++|||||||+|||+.+++.++++|+++++++|||++||+++++..+|||+++|++|+++..|++.++.+
T Consensus 193 LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~~~~ 270 (286)
T PRK14275 193 VARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQLFT 270 (286)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 999999999999999999999999999999999999777999999999999999999999999999999999877754
No 369
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-40 Score=382.19 Aligned_cols=220 Identities=26% Similarity=0.430 Sum_probs=194.9
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCC--C---CcceEEEccccCCc---
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP--P---TTGDALVFGKNITA--- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~--p---~~G~i~i~g~~i~~--- 519 (1723)
+.|+++|+++.|++ +.+++|+||++++||+++|+||||||||||+++|+|+.+ | ++|+|.++|.++..
T Consensus 5 ~~i~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 80 (253)
T PRK14261 5 IILSTKNLNLWYGE----KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGA 80 (253)
T ss_pred ceEEEeeeEEEECC----eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccccc
Confidence 47999999999953 469999999999999999999999999999999999976 3 58999999998854
Q ss_pred cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHH
Q 000284 520 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLS 594 (1723)
Q Consensus 520 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~v~~~l~~~~l~----~~~~~~~~~LSgGqkqrl~ 594 (1723)
+....++.+||+||++.+++. ||+||+.+....++. +....++++.++++.+++. +..++.+.+||||||||++
T Consensus 81 ~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~ 159 (253)
T PRK14261 81 DVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVKDRLHDSALSLSGGQQQRLC 159 (253)
T ss_pred chhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhHHHhhcChhhCCHHHHHHHH
Confidence 334567889999999999885 999999987665553 2334566788899999874 3468899999999999999
Q ss_pred HHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 595 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 595 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
|||||+.+|+++||||||+|||+.+++.++++|+++++++|||++||+++++..+|||+++|++|++++.|++.++..
T Consensus 160 laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 237 (253)
T PRK14261 160 IARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQIFE 237 (253)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHHHh
Confidence 999999999999999999999999999999999999877999999999999999999999999999999999877653
No 370
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-40 Score=380.62 Aligned_cols=220 Identities=25% Similarity=0.434 Sum_probs=191.5
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCC--CC---CceEEEEcCeeCCC-
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEE--YP---TDGTAFIFGKDIRS- 1426 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~--~p---~~G~i~i~G~~i~~- 1426 (1723)
++++++|++|+|++ +.+++|+||+|++||++||+||||||||||+++|+|+. +| ++|+|.++|+++..
T Consensus 4 ~~l~~~~l~~~~~~------~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~ 77 (252)
T PRK14239 4 PILQVSDLSVYYNK------KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSP 77 (252)
T ss_pred ceEEEEeeEEEECC------eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCc
Confidence 47999999999963 45999999999999999999999999999999999985 46 59999999998853
Q ss_pred --ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCCh-hhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHH
Q 000284 1427 --DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAE-YRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRK 1499 (1723)
Q Consensus 1427 --~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~-~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~kqr 1499 (1723)
.....++.+||+||++.+++ +|++||+.+.....+... ...++.+.++++.+++. +..++++.+||||||||
T Consensus 78 ~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qr 156 (252)
T PRK14239 78 RTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKDRLHDSALGLSGGQQQR 156 (252)
T ss_pred ccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHHHHhcCcccCCHHHHHH
Confidence 22345678999999998887 899999987655555432 23456677888998874 45789999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000284 1500 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1579 (1723)
Q Consensus 1500 l~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~ 1579 (1723)
++|||||+.+|++|||||||+|||+.+++.++++|+++. + + +|||++||+++++..+|||+++|++|++++.|++++
T Consensus 157 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 233 (252)
T PRK14239 157 VCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLK-D-D-YTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQ 233 (252)
T ss_pred HHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHh-h-C-CeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999999984 3 3 589999999999999999999999999999999988
Q ss_pred HHh
Q 000284 1580 LKT 1582 (1723)
Q Consensus 1580 l~~ 1582 (1723)
+.+
T Consensus 234 ~~~ 236 (252)
T PRK14239 234 MFM 236 (252)
T ss_pred HHh
Confidence 754
No 371
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-40 Score=386.15 Aligned_cols=219 Identities=25% Similarity=0.410 Sum_probs=194.4
Q ss_pred cceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCC-----CCcceEEEccccCCc--
Q 000284 447 GRCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA-- 519 (1723)
Q Consensus 447 ~~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~-- 519 (1723)
.+.|+++||++.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++..
T Consensus 37 ~~~l~i~~l~~~~~~----~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~ 112 (285)
T PRK14254 37 ETVIEARDLNVFYGD----EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDAD 112 (285)
T ss_pred CceEEEEEEEEEECC----EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccc
Confidence 357999999999953 469999999999999999999999999999999999997 699999999998742
Q ss_pred -cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHH
Q 000284 520 -DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLS 594 (1723)
Q Consensus 520 -~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~----~~~~~~~~~LSgGqkqrl~ 594 (1723)
+....++.+||+||++.+++. ||.||+.+.....+.+. ..+++++++++.+|+. +..++++.+||||||||++
T Consensus 113 ~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LSgGe~qrv~ 190 (285)
T PRK14254 113 VDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQGYDG-DIDERVEESLRRAALWDEVKDQLDSSGLDLSGGQQQRLC 190 (285)
T ss_pred cchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcCCcH-HHHHHHHHHHHHcCCCchhHHHHhCCcccCCHHHHHHHH
Confidence 234567889999999988885 99999988766655543 4567789999999985 4568899999999999999
Q ss_pred HHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEE-EEeCCEEEEecCHHHHH
Q 000284 595 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIA-IMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 595 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~-il~~G~l~~~Gs~~~Lk 671 (1723)
|||||+.+|++|||||||+|||+.+++.++++|+++++++|||++||+++++..+|||++ +|++|+++..|++.++.
T Consensus 191 LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~~ 268 (285)
T PRK14254 191 IARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKIF 268 (285)
T ss_pred HHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999767899999999999999999976 57999999999887664
No 372
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-40 Score=381.16 Aligned_cols=220 Identities=26% Similarity=0.396 Sum_probs=194.3
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCC-----cceEEEccccCCc---c
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPT-----TGDALVFGKNITA---D 520 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~-----~G~i~i~g~~i~~---~ 520 (1723)
.++++||+|.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.. +
T Consensus 4 ~l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 79 (252)
T PRK14272 4 LLSAQDVNIYYGD----KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVD 79 (252)
T ss_pred EEEEeeeEEEECC----EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccC
Confidence 6899999999953 46999999999999999999999999999999999999875 8999999998752 2
Q ss_pred HHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHHH
Q 000284 521 MDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLSL 595 (1723)
Q Consensus 521 ~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~v~~~l~~~~l~----~~~~~~~~~LSgGqkqrl~l 595 (1723)
....|+.+||+||++.+++.+|+.||+.+.....+. ..++..+.+.++++.+++. +..++++++||||||||++|
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~l 159 (252)
T PRK14272 80 PVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEVKDRLKTPATGLSGGQQQRLCI 159 (252)
T ss_pred HHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhhhhhhcCCcccCCHHHHHHHHH
Confidence 345678899999999999999999999876544443 2344556677788888763 45688899999999999999
Q ss_pred HHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 596 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 596 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
||||+.+|+++||||||+|||+.+++.+.++|+++++++|||++||+++++..+||||++|++|+++..|++.++..
T Consensus 160 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 236 (252)
T PRK14272 160 ARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQLFT 236 (252)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999998778999999999999999999999999999999999887754
No 373
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-40 Score=380.78 Aligned_cols=218 Identities=28% Similarity=0.442 Sum_probs=193.4
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCC-----CcceEEEccccCCc--cH
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA--DM 521 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~--~~ 521 (1723)
.++++|++|.|+. +.+++|+||++++||+++|+||||||||||+++|+|+.+| ++|+|.++|.++.. +.
T Consensus 3 ~l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~ 78 (249)
T PRK14253 3 KFNIENLDLFYGE----NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDV 78 (249)
T ss_pred eEEEeccEEEECC----eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccch
Confidence 5889999999953 4699999999999999999999999999999999999986 59999999998742 34
Q ss_pred HHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHHHH
Q 000284 522 DEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVK-EELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLSLG 596 (1723)
Q Consensus 522 ~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~v~~~l~~~~l~----~~~~~~~~~LSgGqkqrl~lA 596 (1723)
...|+.+||+||++.+++ .||.||+.+.....+.. .+..++++.++++.+++. +..++++.+||||||||++||
T Consensus 79 ~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la 157 (249)
T PRK14253 79 ADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVKDRLKSHAFGLSGGQQQRLCIA 157 (249)
T ss_pred HHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhhHHhhcCcccCCHHHHHHHHHH
Confidence 567788999999999887 79999998765444433 334556788889999875 356888999999999999999
Q ss_pred HHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 597 IALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 597 ~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
|||+.+|+++||||||+|||+.+++.++++|+++++++|||++||+++++..+|||+++|++|+++..|++..+.
T Consensus 158 ral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 158 RTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIF 232 (249)
T ss_pred HHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999977799999999999999999999999999999999887664
No 374
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-40 Score=382.12 Aligned_cols=219 Identities=27% Similarity=0.443 Sum_probs=194.1
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCC-----CcceEEEccccCCc---
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA--- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~--- 519 (1723)
..++++|+++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++..
T Consensus 6 ~~l~~~~l~~~~~~----~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~ 81 (259)
T PRK14260 6 PAIKVKDLSFYYNT----SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRI 81 (259)
T ss_pred ceEEEEEEEEEECC----eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEecccccc
Confidence 36999999999953 4699999999999999999999999999999999999985 58999999998742
Q ss_pred cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHH
Q 000284 520 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKG-VKEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLS 594 (1723)
Q Consensus 520 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g-~~~~~~~~~v~~~l~~~~l~----~~~~~~~~~LSgGqkqrl~ 594 (1723)
.....++++||+||++.+|+ +|++||+.+.....+ .++.+.++++.++++.+++. +..++.+.+||||||||++
T Consensus 82 ~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~ 160 (259)
T PRK14260 82 NINRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDKLNKSALGLSGGQQQRLC 160 (259)
T ss_pred chHhhhhheEEEecccccCC-ccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHHHHHHH
Confidence 23456788999999999987 899999987655443 24445566788899999884 4678899999999999999
Q ss_pred HHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEe-----CCEEEEecCHHH
Q 000284 595 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMA-----NGSLKCCGSSLF 669 (1723)
Q Consensus 595 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~-----~G~l~~~Gs~~~ 669 (1723)
|||||+.+|+++||||||+|||+.+++.++++|+++++++|||++||+++++..+|||+++|+ +|++++.|++.+
T Consensus 161 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~~~~~ 240 (259)
T PRK14260 161 IARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFGVTTQ 240 (259)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeCCHHH
Confidence 999999999999999999999999999999999999878999999999999999999999998 599999999887
Q ss_pred HH
Q 000284 670 LK 671 (1723)
Q Consensus 670 Lk 671 (1723)
+.
T Consensus 241 ~~ 242 (259)
T PRK14260 241 IF 242 (259)
T ss_pred Hh
Confidence 64
No 375
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-40 Score=384.26 Aligned_cols=221 Identities=22% Similarity=0.325 Sum_probs=191.4
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCC--------ceEEEEcCeeCC
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPT--------DGTAFIFGKDIR 1425 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~--------~G~i~i~G~~i~ 1425 (1723)
+|+++|++|+|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|+ +|+|.++|.++.
T Consensus 1 ml~~~nl~~~~~~------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~ 74 (272)
T PRK13547 1 MLTADHLHVARRH------RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLA 74 (272)
T ss_pred CeEEEEEEEEECC------EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcc
Confidence 4789999999953 46999999999999999999999999999999999999998 999999999886
Q ss_pred C-ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHc----CCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHH
Q 000284 1426 S-DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIK----GVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKL 1500 (1723)
Q Consensus 1426 ~-~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~----g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl 1500 (1723)
. .....++.++|+||++.++..+|++||+.+..... +....+..+.+.++++.+++.+..++++.+|||||||||
T Consensus 75 ~~~~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv 154 (272)
T PRK13547 75 AIDAPRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRDVTTLSGGELARV 154 (272)
T ss_pred cCCHHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHH
Confidence 4 34455667999999987656699999997642111 111123345678899999999889999999999999999
Q ss_pred HHHHHHh---------cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEE
Q 000284 1501 SVAIAMI---------GDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQL 1571 (1723)
Q Consensus 1501 ~iA~al~---------~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l 1571 (1723)
+||+||+ .+|++|||||||+|||+.+++.+++.|+++.++.| +|||++||+++++..+|||+++|++|++
T Consensus 155 ~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tviiisH~~~~~~~~~d~i~~l~~G~i 233 (272)
T PRK13547 155 QFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWN-LGVLAIVHDPNLAARHADRIAMLADGAI 233 (272)
T ss_pred HHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcC-CEEEEEECCHHHHHHhCCEEEEEECCeE
Confidence 9999999 59999999999999999999999999999864334 5899999999999999999999999999
Q ss_pred EEecChhHHH
Q 000284 1572 RCIGSPQHLK 1581 (1723)
Q Consensus 1572 ~~~g~~~~l~ 1581 (1723)
+..|+++++.
T Consensus 234 ~~~g~~~~~~ 243 (272)
T PRK13547 234 VAHGAPADVL 243 (272)
T ss_pred EEecCHHHHc
Confidence 9999987764
No 376
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8.2e-41 Score=410.56 Aligned_cols=221 Identities=27% Similarity=0.469 Sum_probs=195.4
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhc
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRK 526 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~ 526 (1723)
..|+++||++.|+.++ +..+++|+||+|++||++||+||||+||||+.++|-.+|.|++|+|.+||+||+. +...+|+
T Consensus 464 G~IeF~~VsFaYP~Rp-~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllDG~~i~~~~~~~lr~ 542 (716)
T KOG0058|consen 464 GVIEFEDVSFAYPTRP-DVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLDGVPISDINHKYLRR 542 (716)
T ss_pred ceEEEEEeeeecCCCC-CchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCeehhhcCHHHHHH
Confidence 4699999999999874 5789999999999999999999999999999999999999999999999999975 7889999
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHH-----HHHHHcCCCcccccc----cCCCChhHHHHHHHHH
Q 000284 527 GLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVA-----EMVDEVGLADKVNIV----VRALSGGMKRKLSLGI 597 (1723)
Q Consensus 527 ~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~-----~~l~~~~l~~~~~~~----~~~LSgGqkqrl~lA~ 597 (1723)
+||+|.|+|+||.. ||+|||.++.. ..+.+++++.++ +.+. ++++..|+. ..+||||||||++|||
T Consensus 543 ~Ig~V~QEPvLFs~-sI~eNI~YG~~--~~t~e~i~~AAk~ANah~FI~--~~p~gY~T~VGEkG~qLSGGQKQRIAIAR 617 (716)
T KOG0058|consen 543 KIGLVGQEPVLFSG-SIRENIAYGLD--NATDEEIEAAAKMANAHEFIT--NFPDGYNTVVGEKGSQLSGGQKQRIAIAR 617 (716)
T ss_pred Heeeeeccceeecc-cHHHHHhcCCC--CCCHHHHHHHHHHhChHHHHH--hCccccccccCCccccccchHHHHHHHHH
Confidence 99999999999986 99999998654 344444433221 2222 455555544 4589999999999999
Q ss_pred HHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhhhC
Q 000284 598 ALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYG 675 (1723)
Q Consensus 598 al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~g 675 (1723)
||+.||+||||||.||+||.++...+.+.|.+..++||||++.|++..++. ||+|+++++|++++.|+.++|.++.+
T Consensus 618 ALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~-Ad~Ivvi~~G~V~E~G~h~eLl~~~~ 694 (716)
T KOG0058|consen 618 ALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRH-ADQIVVIDKGRVVEMGTHDELLSKPN 694 (716)
T ss_pred HHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhh-ccEEEEEcCCeEEecccHHHHhhCcc
Confidence 999999999999999999999999999999999999999999999999986 99999999999999999999988764
No 377
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-39 Score=379.07 Aligned_cols=219 Identities=23% Similarity=0.456 Sum_probs=191.6
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCCC--
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIRS-- 1426 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p-----~~G~i~i~G~~i~~-- 1426 (1723)
.|+++|++|.|++ +.+++|+||+|++||++||+||||||||||+++|+|+.+| ++|+|.++|+++..
T Consensus 3 ~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~ 76 (250)
T PRK14240 3 KISVKDLDLFYGD------FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSD 76 (250)
T ss_pred eEEEEEEEEEECC------ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 5889999999963 4599999999999999999999999999999999999763 79999999999863
Q ss_pred -ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCC-hhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHHH
Q 000284 1427 -DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVA-EYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRKL 1500 (1723)
Q Consensus 1427 -~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~kqrl 1500 (1723)
.....++.+||+||++.+++ +|++||+.+.....+.. ....++.+.++++.+++. +..++++.+||||||||+
T Consensus 77 ~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv 155 (250)
T PRK14240 77 IDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKDRLKKSALGLSGGQQQRL 155 (250)
T ss_pred cchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHHHHhcCCCCCCHHHHHHH
Confidence 23346778999999988887 89999998766555542 234456778888888874 456889999999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000284 1501 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1580 (1723)
Q Consensus 1501 ~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l 1580 (1723)
+|||||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|++|++++.|+++++
T Consensus 156 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~-~-~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (250)
T PRK14240 156 CIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK-K-D-YTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDL 232 (250)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c-C-CeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999984 3 4 5899999999999999999999999999999998887
Q ss_pred Hh
Q 000284 1581 KT 1582 (1723)
Q Consensus 1581 ~~ 1582 (1723)
..
T Consensus 233 ~~ 234 (250)
T PRK14240 233 FT 234 (250)
T ss_pred Hh
Confidence 53
No 378
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=383.44 Aligned_cols=219 Identities=28% Similarity=0.430 Sum_probs=195.1
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCC-----CCcceEEEccccCCc---
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA--- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~--- 519 (1723)
..++++|+++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++..
T Consensus 24 ~~l~~~nl~~~~~~----~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 24 TALEVRNLNLFYGD----KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred cEEEEEEEEEEECC----eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 47999999999953 369999999999999999999999999999999999988 489999999998853
Q ss_pred cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHcCCCc----ccccccCCCChhHHHHHH
Q 000284 520 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVK-EELLESVVAEMVDEVGLAD----KVNIVVRALSGGMKRKLS 594 (1723)
Q Consensus 520 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~v~~~l~~~~l~~----~~~~~~~~LSgGqkqrl~ 594 (1723)
+....|+.+||+||++.+++. |++||+.+.....+.. .+..+++++++++.+++.+ ..++.+.+||||||||++
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~ 178 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKDRLHENAFGLSGGQQQRLV 178 (272)
T ss_pred CHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHHHhhCCcccCCHHHHHHHH
Confidence 234567899999999999986 9999998876555542 3344567888999999863 568889999999999999
Q ss_pred HHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 595 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 595 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
|||||+.+|+++||||||+|||+.+++.++++|+++++++|||++||+++++..+||||++|++|+++..|++.++.
T Consensus 179 laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 255 (272)
T PRK14236 179 IARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTDTLF 255 (272)
T ss_pred HHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHHHHh
Confidence 99999999999999999999999999999999999977899999999999999999999999999999999987664
No 379
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=9.3e-40 Score=381.64 Aligned_cols=221 Identities=21% Similarity=0.388 Sum_probs=192.9
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcccc-----CCc-cH
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKN-----ITA-DM 521 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~-----i~~-~~ 521 (1723)
..++++||++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.+ +.. ..
T Consensus 5 ~~l~~~~l~~~~~~----~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~ 80 (258)
T PRK11701 5 PLLSVRGLTKLYGP----RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSE 80 (258)
T ss_pred ceEEEeeeEEEcCC----ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCH
Confidence 46999999999953 369999999999999999999999999999999999999999999999988 643 12
Q ss_pred HH----HhcceEEEccCCC--CCCCCCHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHcCCCc-ccccccCCCChhHHHHH
Q 000284 522 DE----IRKGLGVCPQYDI--LFPELTVREHLEMFAVLKG-VKEELLESVVAEMVDEVGLAD-KVNIVVRALSGGMKRKL 593 (1723)
Q Consensus 522 ~~----~r~~ig~~~Q~~~--l~~~lTv~e~l~~~~~~~g-~~~~~~~~~v~~~l~~~~l~~-~~~~~~~~LSgGqkqrl 593 (1723)
.. .++.+||+||++. +++.+|+.||+.+.....+ ....+.++++.++++.+++.+ ..++.+.+||||||||+
T Consensus 81 ~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~Gq~qrl 160 (258)
T PRK11701 81 AERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDAARIDDLPTTFSGGMQQRL 160 (258)
T ss_pred HHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCChhHHhCCCccCCHHHHHHH
Confidence 21 3567999999973 6778899999976433222 223345677889999999974 67899999999999999
Q ss_pred HHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 594 SLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 594 ~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
+|||||+.+|++|||||||+|||+.+++.+++.|++++ + |+|||++||+++++..+||||++|++|+++..|++.++.
T Consensus 161 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 161 QIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999999999999875 3 899999999999999999999999999999999988775
Q ss_pred h
Q 000284 672 H 672 (1723)
Q Consensus 672 ~ 672 (1723)
.
T Consensus 241 ~ 241 (258)
T PRK11701 241 D 241 (258)
T ss_pred c
Confidence 3
No 380
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=378.17 Aligned_cols=219 Identities=27% Similarity=0.475 Sum_probs=192.1
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCCCC-
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIRSD- 1427 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p-----~~G~i~i~G~~i~~~- 1427 (1723)
+|+++|++|.|++ +.+++++||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++...
T Consensus 3 ~l~~~~l~~~~~~------~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~ 76 (250)
T PRK14262 3 IIEIENFSAYYGE------KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQ 76 (250)
T ss_pred eEEEEeeEEEeCC------ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccch
Confidence 6899999999952 4699999999999999999999999999999999999884 899999999987532
Q ss_pred --hHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCC-hhhHHHHHHHHHHHcCCcc----ccCCCCCCCChhHHHHH
Q 000284 1428 --PKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVA-EYRMDDVVMEKLVEFDLLK----HAKKPSFTLSGGNKRKL 1500 (1723)
Q Consensus 1428 --~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~~~~~l~~~~l~~----~~~~~~~~LSgG~kqrl 1500 (1723)
....++.+||+||++.+++ +|++||+.+.....+.. ....++.+.++++.+++.+ ..++++.+||||||||+
T Consensus 77 ~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~ 155 (250)
T PRK14262 77 LDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKSELNKPGTRLSGGQQQRL 155 (250)
T ss_pred hhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHHHHhCChhhcCHHHHHHH
Confidence 2345678999999998887 89999998765544433 2234556778888888853 47899999999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000284 1501 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1580 (1723)
Q Consensus 1501 ~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l 1580 (1723)
+||+||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|++|+++..|+++++
T Consensus 156 ~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~-~-~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14262 156 CIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELS-E-N-YTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREI 232 (250)
T ss_pred HHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHh-c-C-cEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 99999999999999999999999999999999999985 3 4 5899999999999999999999999999999999888
Q ss_pred Hh
Q 000284 1581 KT 1582 (1723)
Q Consensus 1581 ~~ 1582 (1723)
.+
T Consensus 233 ~~ 234 (250)
T PRK14262 233 VE 234 (250)
T ss_pred Hh
Confidence 65
No 381
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=6.2e-40 Score=375.60 Aligned_cols=215 Identities=29% Similarity=0.479 Sum_probs=189.7
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCC---CCcceEEEccccCCccHHHHh
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP---PTTGDALVFGKNITADMDEIR 525 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~---p~~G~i~i~g~~i~~~~~~~r 525 (1723)
.++++|+++.|++.++.+.+++|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. ...|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~--~~~~ 80 (226)
T cd03234 3 VLPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKP--DQFQ 80 (226)
T ss_pred cceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECCh--HHhc
Confidence 46789999999764324679999999999999999999999999999999999999 999999999998752 3567
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcCC---CHHHHHHHHHH-HHHHcCCCcccccccCCCChhHHHHHHHHHHHhc
Q 000284 526 KGLGVCPQYDILFPELTVREHLEMFAVLKGV---KEELLESVVAE-MVDEVGLADKVNIVVRALSGGMKRKLSLGIALIG 601 (1723)
Q Consensus 526 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~---~~~~~~~~v~~-~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~ 601 (1723)
+.+||+||++.+++.+||+||+.+.....+. ......+++++ .++.+++.+..++.+++||||||||++|||||+.
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~ 160 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLVKGISGGERRRVSIAVQLLW 160 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhcccccCcCHHHHHHHHHHHHHHh
Confidence 8899999999999999999999987654331 22223345556 8999999988899999999999999999999999
Q ss_pred CCcEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCH-HHHHhhcCEEEEEeCCEEEEec
Q 000284 602 DSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSM-DEAEELGDRIAIMANGSLKCCG 665 (1723)
Q Consensus 602 ~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~-~e~~~l~dri~il~~G~l~~~G 665 (1723)
+|+++||||||+|||+.+++.++++|++++ +|+|+|++||++ +++..+|||+++|++|++++.|
T Consensus 161 ~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 161 DPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 999999999999999999999999999985 589999999999 6999999999999999998765
No 382
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.3e-39 Score=379.46 Aligned_cols=218 Identities=23% Similarity=0.349 Sum_probs=190.1
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC----CceEEEEcCeeCCCChH
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP----TDGTAFIFGKDIRSDPK 1429 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p----~~G~i~i~G~~i~~~~~ 1429 (1723)
+|+++|++|+|+ +.+++|+||+|++||++||+|+||||||||+++|+|+++| ++|+|+++|+++.. ..
T Consensus 4 ~l~~~~l~~~~~-------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~-~~ 75 (254)
T PRK10418 4 QIELRNIALQAA-------QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAP-CA 75 (254)
T ss_pred EEEEeCeEEEec-------cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccc-cc
Confidence 689999999992 3589999999999999999999999999999999999999 99999999998853 22
Q ss_pred HhccceEEEecCCC--CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCcc---ccCCCCCCCChhHHHHHHHHH
Q 000284 1430 AARRLIGYCPQFDA--LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLK---HAKKPSFTLSGGNKRKLSVAI 1504 (1723)
Q Consensus 1430 ~~~~~ig~~pQ~~~--l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~---~~~~~~~~LSgG~kqrl~iA~ 1504 (1723)
..++.+||+||++. +.+.+|+.+++.......+... .++.+.++++.+++.+ ..++++.+|||||||||+|||
T Consensus 76 ~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~l~~~~~~~~~~~~~LS~Gq~qrv~lar 153 (254)
T PRK10418 76 LRGRKIATIMQNPRSAFNPLHTMHTHARETCLALGKPA--DDATLTAALEAVGLENAARVLKLYPFEMSGGMLQRMMIAL 153 (254)
T ss_pred cccceEEEEecCCccccCccccHHHHHHHHHHHcCCCh--HHHHHHHHHHHcCCCChhhhhhcCCcccCHHHHHHHHHHH
Confidence 23467999999974 4456799999876555444432 2356788999999976 468999999999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1505 AMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1505 al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
||+.+|++|||||||+|||+.+++.+++.|++++++.| +|||++||+++++..+|||+++|++|+++..|+++++.+
T Consensus 154 al~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g-~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 230 (254)
T PRK10418 154 ALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRA-LGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLFN 230 (254)
T ss_pred HHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcC-cEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHhh
Confidence 99999999999999999999999999999999864434 689999999999999999999999999999999988764
No 383
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=379.56 Aligned_cols=218 Identities=23% Similarity=0.428 Sum_probs=192.1
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCC-----CCcceEEEccccCCc---cH
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA---DM 521 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~---~~ 521 (1723)
-+++||++.|++ +.+++|+||+|.+||+++|+|+||||||||+++|+|+.+ |++|+|.++|.++.. ..
T Consensus 6 ~~~~~l~~~~~~----~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 81 (251)
T PRK14244 6 ASVKNLNLWYGS----KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNV 81 (251)
T ss_pred EEeeeEEEEECC----eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccch
Confidence 468999999953 469999999999999999999999999999999999986 579999999988742 22
Q ss_pred HHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHcCCCc----ccccccCCCChhHHHHHHH
Q 000284 522 DEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV--KEELLESVVAEMVDEVGLAD----KVNIVVRALSGGMKRKLSL 595 (1723)
Q Consensus 522 ~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~--~~~~~~~~v~~~l~~~~l~~----~~~~~~~~LSgGqkqrl~l 595 (1723)
..+|+.+||+||++.+++. |+.||+.+....++. .....++++.++++.+|+.+ ..++.+.+||||||||++|
T Consensus 82 ~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~l 160 (251)
T PRK14244 82 VLLRAKVGMVFQKPNPFPK-SIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELGDRLKDSAFELSGGQQQRLCI 160 (251)
T ss_pred HHHhhhEEEEecCcccccC-CHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhhhHhhcChhhCCHHHHHHHHH
Confidence 3467889999999998886 999999876544443 23445667889999999965 4578899999999999999
Q ss_pred HHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 596 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 596 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
||||+.+|+++||||||+|||+.+++.+++.|+++++|+|||++||+++++..+||||++|++|+++..|++.++.+
T Consensus 161 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 237 (251)
T PRK14244 161 ARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEIFK 237 (251)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998778999999999999999999999999999999999877643
No 384
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=383.04 Aligned_cols=220 Identities=27% Similarity=0.453 Sum_probs=193.2
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCC-----CCcceEEEccccCCc---
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA--- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~--- 519 (1723)
+.++++||++.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++..
T Consensus 23 ~~l~~~~l~~~~~~----~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 98 (271)
T PRK14238 23 VVFDTQNLNLWYGE----DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSY 98 (271)
T ss_pred eEEEEeeeEEEECC----cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccc
Confidence 47999999999953 359999999999999999999999999999999999997 699999999998742
Q ss_pred cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHcCC----CcccccccCCCChhHHHHHH
Q 000284 520 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVK-EELLESVVAEMVDEVGL----ADKVNIVVRALSGGMKRKLS 594 (1723)
Q Consensus 520 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~v~~~l~~~~l----~~~~~~~~~~LSgGqkqrl~ 594 (1723)
.....++.+||+||++.+++. |++||+.+.....+.. ....++.+.++++.+++ .+..++++.+||||||||++
T Consensus 99 ~~~~~~~~i~~v~q~~~~~~~-tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~LSgGe~qrv~ 177 (271)
T PRK14238 99 SVEELRTNVGMVFQKPNPFPK-SIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDELKDRLHDNAYGLSGGQQQRLC 177 (271)
T ss_pred cHHHHhhhEEEEecCCccccc-cHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchHHHHHhcCcccCCHHHHHHHH
Confidence 344567889999999998874 9999998866544433 23345567788887754 45568899999999999999
Q ss_pred HHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 595 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 595 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
|||||+.+|+++||||||+|||+.+++++.++|+++++++|||++||+++++..+|||+++|++|+++..|++.++.+
T Consensus 178 laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~~ 255 (271)
T PRK14238 178 IARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKIFS 255 (271)
T ss_pred HHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHHHc
Confidence 999999999999999999999999999999999999878999999999999999999999999999999999877643
No 385
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-39 Score=384.37 Aligned_cols=222 Identities=24% Similarity=0.364 Sum_probs=192.6
Q ss_pred CcceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeCC
Q 000284 1351 DNAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDIR 1425 (1723)
Q Consensus 1351 ~~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~-----p~~G~i~i~G~~i~ 1425 (1723)
.+++|+++|++++|++ +.+++|+||+|++||++||+||||||||||+++|+|+.+ |++|+|.++|.++.
T Consensus 36 ~~~~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~ 109 (286)
T PRK14275 36 GKPHVVAKNFSIYYGE------FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIY 109 (286)
T ss_pred CceEEEEeeeEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhh
Confidence 4568999999999953 459999999999999999999999999999999999864 49999999999875
Q ss_pred C---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCC-hhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHH
Q 000284 1426 S---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVA-EYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNK 1497 (1723)
Q Consensus 1426 ~---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~k 1497 (1723)
. .....++++||+||++.+++. |+.||+.+.....+.. ....++.+.++++.+++. +..++++.+||||||
T Consensus 110 ~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~ 188 (286)
T PRK14275 110 GKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVSDRLDKNALGLSGGQQ 188 (286)
T ss_pred hcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchhhHhhCChhhCCHHHH
Confidence 3 223457789999999988874 9999998865554543 223445677888888873 567899999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecCh
Q 000284 1498 RKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSP 1577 (1723)
Q Consensus 1498 qrl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~ 1577 (1723)
|||+|||||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|++|+++..|++
T Consensus 189 qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~-~-~-~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~ 265 (286)
T PRK14275 189 QRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELR-G-S-YTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPT 265 (286)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c-C-CeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999999999985 3 3 5899999999999999999999999999999999
Q ss_pred hHHHh
Q 000284 1578 QHLKT 1582 (1723)
Q Consensus 1578 ~~l~~ 1582 (1723)
+++.+
T Consensus 266 ~~~~~ 270 (286)
T PRK14275 266 AQLFT 270 (286)
T ss_pred HHHHh
Confidence 88764
No 386
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-39 Score=382.70 Aligned_cols=221 Identities=25% Similarity=0.453 Sum_probs=192.8
Q ss_pred CcceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeCC
Q 000284 1351 DNAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDIR 1425 (1723)
Q Consensus 1351 ~~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~-----p~~G~i~i~G~~i~ 1425 (1723)
++++|+++||+|+|++ +.+++|+||+|++||++||+||||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 36 ~~~~l~i~~l~~~~~~------~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~ 109 (285)
T PRK14254 36 GETVIEARDLNVFYGD------EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVY 109 (285)
T ss_pred CCceEEEEEEEEEECC------EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEcc
Confidence 3568999999999953 459999999999999999999999999999999999987 69999999999875
Q ss_pred C---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHH
Q 000284 1426 S---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKR 1498 (1723)
Q Consensus 1426 ~---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~kq 1498 (1723)
. .....++++||+||++.+++. |+.||+.+.....+.+. ...+++.++++.+++. +..++++.+|||||||
T Consensus 110 ~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LSgGe~q 187 (285)
T PRK14254 110 DADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQGYDG-DIDERVEESLRRAALWDEVKDQLDSSGLDLSGGQQQ 187 (285)
T ss_pred ccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcCCcH-HHHHHHHHHHHHcCCCchhHHHHhCCcccCCHHHHH
Confidence 3 234567789999999888875 99999987666555443 3456678899999884 4578999999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEE-EEECCEEEEecCh
Q 000284 1499 KLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIG-IMVGGQLRCIGSP 1577 (1723)
Q Consensus 1499 rl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~-im~~G~l~~~g~~ 1577 (1723)
||+|||||+.+|+||||||||+|||+.+++.++++|++++ + + .|||++||+++++..+|||++ +|++|+++..|++
T Consensus 188 rv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~-~-~-~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~ 264 (285)
T PRK14254 188 RLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELA-E-E-YTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDT 264 (285)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-c-C-CEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCH
Confidence 9999999999999999999999999999999999999985 3 3 489999999999999999976 5699999999998
Q ss_pred hHHHh
Q 000284 1578 QHLKT 1582 (1723)
Q Consensus 1578 ~~l~~ 1582 (1723)
+++..
T Consensus 265 ~~~~~ 269 (285)
T PRK14254 265 DKIFE 269 (285)
T ss_pred HHHHh
Confidence 88753
No 387
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-39 Score=377.95 Aligned_cols=220 Identities=23% Similarity=0.391 Sum_probs=191.6
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeCCC-
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDIRS- 1426 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~-----p~~G~i~i~G~~i~~- 1426 (1723)
++|+++|++++|+. +.+++++||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|+++..
T Consensus 3 ~~l~~~~l~~~~~~------~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~ 76 (251)
T PRK14251 3 NIISAKDVHLSYGN------YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGS 76 (251)
T ss_pred ceEEEEeeEEEECC------eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccc
Confidence 36899999999953 469999999999999999999999999999999999997 489999999998753
Q ss_pred --ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCCh-hhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHH
Q 000284 1427 --DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAE-YRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRK 1499 (1723)
Q Consensus 1427 --~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~-~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~kqr 1499 (1723)
.....++.+||++|++.+++ .|++||+.+.....+... ...++.+.++++.+++. +..++++.+||||||||
T Consensus 77 ~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr 155 (251)
T PRK14251 77 KMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETKDNLDRNAQAFSGGQQQR 155 (251)
T ss_pred cchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchHHHhccChhhCCHHHHHH
Confidence 22345778999999998886 799999987655444432 23445677888999984 45688999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000284 1500 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1579 (1723)
Q Consensus 1500 l~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~ 1579 (1723)
++|||||+.+|++|||||||+|||+.+++.+++.|+++. + + +|||++||+++++..+||||++|++|++++.|++++
T Consensus 156 ~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~-~-~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 232 (251)
T PRK14251 156 ICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELK-H-Q-YTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEE 232 (251)
T ss_pred HHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHH-c-C-CeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999999984 3 4 589999999999999999999999999999999988
Q ss_pred HHh
Q 000284 1580 LKT 1582 (1723)
Q Consensus 1580 l~~ 1582 (1723)
+..
T Consensus 233 ~~~ 235 (251)
T PRK14251 233 MFI 235 (251)
T ss_pred HHh
Confidence 753
No 388
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-39 Score=379.00 Aligned_cols=221 Identities=24% Similarity=0.419 Sum_probs=193.2
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCC-----ceEEEEcCeeCCC--
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPT-----DGTAFIFGKDIRS-- 1426 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~-----~G~i~i~G~~i~~-- 1426 (1723)
+|+++|++|+|++ ..+++|+||++++||++||+|+||||||||+++|+|+++|+ +|+|.++|+++..
T Consensus 7 ~l~~~nl~~~~~~------~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~ 80 (261)
T PRK14258 7 AIKVNNLSFYYDT------QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERR 80 (261)
T ss_pred eEEEeeEEEEeCC------eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccc
Confidence 6899999999953 35999999999999999999999999999999999999986 8999999998742
Q ss_pred -ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCC-ChhhHHHHHHHHHHHcCCcc----ccCCCCCCCChhHHHHH
Q 000284 1427 -DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGV-AEYRMDDVVMEKLVEFDLLK----HAKKPSFTLSGGNKRKL 1500 (1723)
Q Consensus 1427 -~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~~~~~l~~~~l~~----~~~~~~~~LSgG~kqrl 1500 (1723)
.....++.++|+||++.+++ +|++||+.+.....+. +..+..+.+.++++.+++.+ ..++++.+||||||||+
T Consensus 81 ~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv 159 (261)
T PRK14258 81 VNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKHKIHKSALDLSGGQQQRL 159 (261)
T ss_pred cchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHHHHHH
Confidence 22355778999999988887 8999999876554443 33334456778899998743 46889999999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEEC-----CEEEEec
Q 000284 1501 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVG-----GQLRCIG 1575 (1723)
Q Consensus 1501 ~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~-----G~l~~~g 1575 (1723)
+|||||+.+|++|||||||+|||+.+++.+++.|+++++++| +|||++||+++++..+||||++|++ |+++..|
T Consensus 160 ~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~-~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~ 238 (261)
T PRK14258 160 CIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSE-LTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVEFG 238 (261)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCC-CEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEEeC
Confidence 999999999999999999999999999999999999864444 6899999999999999999999999 9999999
Q ss_pred ChhHHHh
Q 000284 1576 SPQHLKT 1582 (1723)
Q Consensus 1576 ~~~~l~~ 1582 (1723)
+++++.+
T Consensus 239 ~~~~~~~ 245 (261)
T PRK14258 239 LTKKIFN 245 (261)
T ss_pred CHHHHHh
Confidence 9998854
No 389
>COG4674 Uncharacterized ABC-type transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.8e-40 Score=346.04 Aligned_cols=222 Identities=27% Similarity=0.424 Sum_probs=202.9
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcc-ccCCc--cHHHH
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFG-KNITA--DMDEI 524 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g-~~i~~--~~~~~ 524 (1723)
..+.++||+.+|+ +..||+++||++.+||.-+|+|||||||||+|.+|+|..+|+.|+++++| .|+++ ..+-.
T Consensus 4 ~iL~~~~vsVsF~----GF~Aln~ls~~v~~Gelr~lIGpNGAGKTT~mD~ItGKtrp~~G~v~f~g~~dl~~~~e~~IA 79 (249)
T COG4674 4 IILYLDGVSVSFG----GFKALNDLSFSVDPGELRVLIGPNGAGKTTLMDVITGKTRPQEGEVLFDGDTDLTKLPEHRIA 79 (249)
T ss_pred ceEEEeceEEEEc----ceeeeeeeEEEecCCeEEEEECCCCCCceeeeeeecccCCCCcceEEEcCchhhccCCHHHHH
Confidence 4689999999995 45699999999999999999999999999999999999999999999999 78864 34456
Q ss_pred hcceEEEccCCCCCCCCCHHHHHHHHHHh--------cCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHH
Q 000284 525 RKGLGVCPQYDILFPELTVREHLEMFAVL--------KGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLG 596 (1723)
Q Consensus 525 r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~--------~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA 596 (1723)
|..||--+|.|..|+.+||+|||.+.... ......+-+++++++|+..||.+.+++.+..||-||||+|.|+
T Consensus 80 r~GIGRKFQ~PtVfe~ltV~eNLelA~~~~k~v~a~L~~r~~~~e~~ride~La~igL~~~~~~~A~~LSHGqKQwLEIG 159 (249)
T COG4674 80 RAGIGRKFQKPTVFENLTVRENLELALNRDKSVFASLFARLRAEERRRIDELLATIGLGDERDRLAALLSHGQKQWLEIG 159 (249)
T ss_pred HhccCccccCCeehhhccHHHHHHHHhcCCcchHHHhhhhcChhHHHHHHHHHHHcccchhhhhhhhhhccchhhhhhhh
Confidence 78899999999999999999999885432 2222344567899999999999999999999999999999999
Q ss_pred HHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000284 597 IALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 673 (1723)
Q Consensus 597 ~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~ 673 (1723)
+-++++|++|+||||++||....+++.-++|+.++++++|+++.|||+++..+||||.+|+.|++.|.|+.+++.+.
T Consensus 160 Mll~Q~P~lLLlDEPvAGMTd~Et~~taeLl~~la~~hsilVVEHDM~Fvr~~A~~VTVlh~G~VL~EGsld~v~~d 236 (249)
T COG4674 160 MLLAQDPKLLLLDEPVAGMTDAETEKTAELLKSLAGKHSILVVEHDMGFVREIADKVTVLHEGSVLAEGSLDEVQND 236 (249)
T ss_pred eeeccCCcEEEecCccCCCcHHHHHHHHHHHHHHhcCceEEEEeccHHHHHHhhheeEEEeccceeecccHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888654
No 390
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-39 Score=379.50 Aligned_cols=221 Identities=24% Similarity=0.377 Sum_probs=193.3
Q ss_pred cceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeCCC
Q 000284 1352 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDIRS 1426 (1723)
Q Consensus 1352 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~-----p~~G~i~i~G~~i~~ 1426 (1723)
..+|+++|++|+|+ ++.+++|+||++++||++||+||||||||||+++|+|+++ |++|+|.++|+++..
T Consensus 18 ~~~l~~~nl~~~~~------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~ 91 (267)
T PRK14237 18 EIALSTKDLHVYYG------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINR 91 (267)
T ss_pred CeEEEEeeEEEEEC------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEccc
Confidence 35799999999995 2569999999999999999999999999999999999986 589999999999853
Q ss_pred ---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCC-ChhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHH
Q 000284 1427 ---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGV-AEYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKR 1498 (1723)
Q Consensus 1427 ---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~kq 1498 (1723)
.....++.|||+||++.+++ .|++||+.+.....+. .+...++++.++++.+++. +..++++.+|||||||
T Consensus 92 ~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~q 170 (267)
T PRK14237 92 KEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVKDDLHKSALTLSGGQQQ 170 (267)
T ss_pred ccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhhhhcCCcccCCHHHHH
Confidence 23345778999999988887 6999999876544443 2334456678889999884 4578999999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChh
Q 000284 1499 KLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQ 1578 (1723)
Q Consensus 1499 rl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~ 1578 (1723)
|++|||||+.+|++|||||||+|||+.+++.++++|+++. + + .|||++||+++++..+|||+++|++|++++.|+++
T Consensus 171 rl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 247 (267)
T PRK14237 171 RLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-K-N-YTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTR 247 (267)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-c-C-CEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 9999999999999999999999999999999999999984 3 4 58999999999999999999999999999999998
Q ss_pred HHHh
Q 000284 1579 HLKT 1582 (1723)
Q Consensus 1579 ~l~~ 1582 (1723)
++..
T Consensus 248 ~~~~ 251 (267)
T PRK14237 248 NIFT 251 (267)
T ss_pred HHhc
Confidence 8754
No 391
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=3.9e-40 Score=380.23 Aligned_cols=219 Identities=24% Similarity=0.422 Sum_probs=186.6
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhcce
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKGL 528 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~i 528 (1723)
|+++|+++.|+.. .+.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. +....++.+
T Consensus 1 i~~~~l~~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 78 (237)
T cd03252 1 ITFEHVRFRYKPD--GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQV 78 (237)
T ss_pred CEEEEEEEecCCC--CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcE
Confidence 4689999999642 2469999999999999999999999999999999999999999999999998753 344567889
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCCcccccccCCCChhHHHHHHHHHHHhc
Q 000284 529 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLES-----VVAEMVDEV--GLADKVNIVVRALSGGMKRKLSLGIALIG 601 (1723)
Q Consensus 529 g~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~-----~v~~~l~~~--~l~~~~~~~~~~LSgGqkqrl~lA~al~~ 601 (1723)
||+||++.+++ .||.||+.+... +.......+ .+.++++.+ ++....++++.+|||||||||+|||||+.
T Consensus 79 ~~~~q~~~~~~-~tv~~nl~~~~~--~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~ 155 (237)
T cd03252 79 GVVLQENVLFN-RSIRDNIALADP--GMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIH 155 (237)
T ss_pred EEEcCCchhcc-chHHHHhhccCC--CCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhh
Confidence 99999998875 699999987431 222222211 234455555 56666788999999999999999999999
Q ss_pred CCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhhh
Q 000284 602 DSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQY 674 (1723)
Q Consensus 602 ~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~ 674 (1723)
+|+++||||||+|||+.+++.+++.|+++++|+|||++||++++++ .|||+++|++|+++..|++.++.+..
T Consensus 156 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~-~~d~v~~l~~G~i~~~~~~~~~~~~~ 227 (237)
T cd03252 156 NPRILIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVK-NADRIIVMEKGRIVEQGSHDELLAEN 227 (237)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHH-hCCEEEEEECCEEEEEcCHHHHHhcc
Confidence 9999999999999999999999999999877999999999999996 59999999999999999988776553
No 392
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.1e-39 Score=372.00 Aligned_cols=211 Identities=29% Similarity=0.462 Sum_probs=188.9
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-c---HHHHh
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-D---MDEIR 525 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~---~~~~r 525 (1723)
++++|+++.|+.+.+.+.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|+++|.++.. . ....+
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 6899999999653223579999999999999999999999999999999999999999999999998743 1 22467
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCc
Q 000284 526 KGLGVCPQYDILFPELTVREHLEMFAVLK-GVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSK 604 (1723)
Q Consensus 526 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~-g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~ 604 (1723)
+.+||+||++.+|+.+|+.||+.+..... +.+.++.++++.++++.+||.+..++.+.+||||||||++|||||+.+|+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrv~laral~~~p~ 161 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHLDYYPHNLSGGQKQRVAIARALVHRPK 161 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcCCC
Confidence 88999999999999999999999876554 34556667789999999999988899999999999999999999999999
Q ss_pred EeeccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEE
Q 000284 605 VVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSL 661 (1723)
Q Consensus 605 vliLDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l 661 (1723)
++||||||+|||+.+++.++++|++++ .++|||++||+++.+ .+||+|++|++|++
T Consensus 162 illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~-~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 162 LVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRIL-DVADRIVHMEDGKL 219 (220)
T ss_pred EEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHH-hhCCEEEEEECCEE
Confidence 999999999999999999999999985 389999999999865 68999999999986
No 393
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-39 Score=381.16 Aligned_cols=220 Identities=25% Similarity=0.374 Sum_probs=195.2
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCC-----CcceEEEccccCCc--c
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA--D 520 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~--~ 520 (1723)
+.++++||+|.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.. .
T Consensus 20 ~~l~i~nl~~~~~~----~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~ 95 (276)
T PRK14271 20 PAMAAVNLTLGFAG----KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRD 95 (276)
T ss_pred cEEEEeeEEEEECC----EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccch
Confidence 47899999999953 4699999999999999999999999999999999999986 79999999998753 2
Q ss_pred HHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHcCCCc----ccccccCCCChhHHHHHHH
Q 000284 521 MDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKG-VKEELLESVVAEMVDEVGLAD----KVNIVVRALSGGMKRKLSL 595 (1723)
Q Consensus 521 ~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g-~~~~~~~~~v~~~l~~~~l~~----~~~~~~~~LSgGqkqrl~l 595 (1723)
....++.+||+||++.+|+ .|++||+.+.....+ .+..+.++++.++++.+++.. ..++.+.+||||||||++|
T Consensus 96 ~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl~L 174 (276)
T PRK14271 96 VLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLCL 174 (276)
T ss_pred hHHHhhheEEeccCCccCC-ccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchhhhHhhCCcccCCHHHHHHHHH
Confidence 3456788999999999988 799999987654332 344555667788999999974 3578899999999999999
Q ss_pred HHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 596 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 596 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
||||+.+|+++||||||+|||+.+++.+.++|+++++++|||++||+++++..+|||+++|++|+++..|++.++.+
T Consensus 175 Aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 251 (276)
T PRK14271 175 ARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFS 251 (276)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999998767899999999999999999999999999999999887754
No 394
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=1e-39 Score=374.66 Aligned_cols=206 Identities=25% Similarity=0.388 Sum_probs=181.1
Q ss_pred eeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC----CceEEEEcCeeCCCChHHhccceEEEecCCC--CCCCC
Q 000284 1375 AVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP----TDGTAFIFGKDIRSDPKAARRLIGYCPQFDA--LLEYL 1448 (1723)
Q Consensus 1375 al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p----~~G~i~i~G~~i~~~~~~~~~~ig~~pQ~~~--l~~~l 1448 (1723)
+++|+||++++||++||+||||||||||+++|+|+++| ++|+|.++|+++... ...++.+||+||++. +.+.+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~-~~~~~~i~~~~q~~~~~~~~~~ 79 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPL-SIRGRHIATIMQNPRTAFNPLF 79 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhh-hhhhheeEEEecCchhhcCccc
Confidence 57899999999999999999999999999999999999 899999999988543 223457999999974 55678
Q ss_pred CHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc---cccCCCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHH
Q 000284 1449 TVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL---KHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPI 1525 (1723)
Q Consensus 1449 Tv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~---~~~~~~~~~LSgG~kqrl~iA~al~~~p~vllLDEPT~gLD~~ 1525 (1723)
|+.||+.+.....+......++++.++++.+++. +..++++.+|||||||||+|||||+.+|+||||||||+|||+.
T Consensus 80 t~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~ 159 (230)
T TIGR02770 80 TMGNHAIETLRSLGKLSKQARALILEALEAVGLPDPEEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVV 159 (230)
T ss_pred CHHHHHHHHHHHcCccHHHHHHHHHHHHHHcCCCchHHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHH
Confidence 9999997765544443344456788999999997 5678999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1526 AKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1526 ~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
+++.+++.|++++++.| +|||++||+++++..+|||+++|++|++++.|+++++..
T Consensus 160 ~~~~l~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 215 (230)
T TIGR02770 160 NQARVLKLLRELRQLFG-TGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEIFY 215 (230)
T ss_pred HHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999864334 589999999999999999999999999999999988864
No 395
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.5e-40 Score=332.45 Aligned_cols=216 Identities=26% Similarity=0.417 Sum_probs=201.9
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCC-------ccH
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNIT-------ADM 521 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~-------~~~ 521 (1723)
.|+++|+++.|+. ..+|-|++|+.++||.++|+||+|||||||++.|.=+.-|.+|+..|.|.... +..
T Consensus 2 sirv~~in~~yg~----~q~lfdi~l~~~~getlvllgpsgagkssllr~lnlle~p~sg~l~ia~~~fd~s~~~~~k~i 77 (242)
T COG4161 2 SIQLNGINCFYGA----HQALFDITLDCPEGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAI 77 (242)
T ss_pred ceEEccccccccc----chheeeeeecCCCCCEEEEECCCCCchHHHHHHHHHHhCCCCCeEEecccccccccCccHHHH
Confidence 4899999999954 46999999999999999999999999999999999999999999999887542 234
Q ss_pred HHHhcceEEEccCCCCCCCCCHHHHHH-HHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHh
Q 000284 522 DEIRKGLGVCPQYDILFPELTVREHLE-MFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALI 600 (1723)
Q Consensus 522 ~~~r~~ig~~~Q~~~l~~~lTv~e~l~-~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~ 600 (1723)
.++|+.+|+|+|.-.|||+|||.|||. -.++..|+++++.+.++.++|+.+.|.++.|+.+-.|||||+||++|||||+
T Consensus 78 ~~lr~~vgmvfqqy~lwphltv~enlieap~kv~gl~~~qa~~~a~ellkrlrl~~~adr~plhlsggqqqrvaiaralm 157 (242)
T COG4161 78 RDLRRNVGMVFQQYNLWPHLTVQENLIEAPCRVLGLSKDQALARAEKLLKRLRLKPYADRYPLHLSGGQQQRVAIARALM 157 (242)
T ss_pred HHHHHhhhhhhhhhccCchhHHHHHHHhhhHHHhCCCHHHHHHHHHHHHHHhccccccccCceecccchhhhHHHHHHHh
Confidence 578999999999999999999999974 5678889999999999999999999999999999999999999999999999
Q ss_pred cCCcEeeccCCCCCCCHHHHHHHHHHHHHHhC-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHH
Q 000284 601 GDSKVVILDEPTSGMDPYSMRLTWQLIKKIKK-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSL 668 (1723)
Q Consensus 601 ~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~ 668 (1723)
.+|+||++||||++|||+-..++.++|+++.+ |.|-+++||..+.|...+.||+.|++|++++.|+..
T Consensus 158 mkpqvllfdeptaaldpeitaqvv~iikel~~tgitqvivthev~va~k~as~vvyme~g~ive~g~a~ 226 (242)
T COG4161 158 MEPQVLLFDEPTAALDPEITAQIVSIIKELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDAS 226 (242)
T ss_pred cCCcEEeecCcccccCHHHHHHHHHHHHHHHhcCceEEEEEeehhHHHhhhhheEeeecCeeEeecchh
Confidence 99999999999999999999999999999975 999999999999999999999999999999999863
No 396
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-39 Score=377.00 Aligned_cols=220 Identities=27% Similarity=0.438 Sum_probs=191.1
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCC-----ceEEEEcCeeCCC--
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPT-----DGTAFIFGKDIRS-- 1426 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~-----~G~i~i~G~~i~~-- 1426 (1723)
+++++|++|.|++ +.+++|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.++|.++..
T Consensus 4 ~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~ 77 (252)
T PRK14272 4 LLSAQDVNIYYGD------KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPR 77 (252)
T ss_pred EEEEeeeEEEECC------EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCc
Confidence 6899999999952 46999999999999999999999999999999999999875 8999999998853
Q ss_pred -ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCC-hhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHHH
Q 000284 1427 -DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVA-EYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRKL 1500 (1723)
Q Consensus 1427 -~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~kqrl 1500 (1723)
.....++.+||+||++.+++.+|+.||+.+.....+.. +++..+.+.++++.+++. +..++++++||||||||+
T Consensus 78 ~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv 157 (252)
T PRK14272 78 VDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEVKDRLKTPATGLSGGQQQRL 157 (252)
T ss_pred cCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhhhhhhcCCcccCCHHHHHHH
Confidence 23355778999999999999899999998755444432 233445566677777653 456889999999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000284 1501 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1580 (1723)
Q Consensus 1501 ~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l 1580 (1723)
+|||||+.+|++|||||||+|||+.+++.+.+.|++++ + + +|||++||+++++..+|||+++|++|+++..|+++++
T Consensus 158 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~-~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14272 158 CIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLK-K-V-TTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQL 234 (252)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c-C-CeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999984 3 4 6899999999999999999999999999999999887
Q ss_pred Hh
Q 000284 1581 KT 1582 (1723)
Q Consensus 1581 ~~ 1582 (1723)
..
T Consensus 235 ~~ 236 (252)
T PRK14272 235 FT 236 (252)
T ss_pred Hh
Confidence 54
No 397
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.3e-40 Score=336.07 Aligned_cols=216 Identities=25% Similarity=0.391 Sum_probs=198.0
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChH----
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPK---- 1429 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~---- 1429 (1723)
+|++++++|.-+.+. +...+|++|+|.|++||.+||+||+|||||||+-+++|+..|++|+|++.|+++.+-.+
T Consensus 6 ii~~~~l~ktvg~~~--~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA 83 (228)
T COG4181 6 IIEVHHLSKTVGQGE--GELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARA 83 (228)
T ss_pred eeehhhhhhhhcCCC--cceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHH
Confidence 789999999987653 46779999999999999999999999999999999999999999999999999866322
Q ss_pred Hh-ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhc
Q 000284 1430 AA-RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIG 1508 (1723)
Q Consensus 1430 ~~-~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~ 1508 (1723)
.. .+++|+|+|...|.|+||..||+.+.+.++|-...+..+.+.++|+++||.+..+.++++||||+||||+||||++.
T Consensus 84 ~~R~~~vGfVFQSF~Lip~ltAlENV~lPleL~ge~~~~~~~~A~~lL~~vGLg~Rl~HyP~qLSGGEQQRVAiARAfa~ 163 (228)
T COG4181 84 ALRARHVGFVFQSFHLIPNLTALENVALPLELRGESSADSRAGAKALLEAVGLGKRLTHYPAQLSGGEQQRVALARAFAG 163 (228)
T ss_pred HhhccceeEEEEeeeccccchhhhhccchhhhcCCccccHHHHHHHHHHHhCcccccccCccccCchHHHHHHHHHHhcC
Confidence 22 36799999999999999999999999999997666667788999999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEE
Q 000284 1509 DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRC 1573 (1723)
Q Consensus 1509 ~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~ 1573 (1723)
.|+|||-||||-+||-.+-+.+.+++-+++++.| +|.+++|||...+.+ |+|++-|.+|+++.
T Consensus 164 ~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G-~TlVlVTHD~~LA~R-c~R~~r~~~G~l~~ 226 (228)
T COG4181 164 RPDVLFADEPTGNLDRATGDKIADLLFALNRERG-TTLVLVTHDPQLAAR-CDRQLRLRSGRLVE 226 (228)
T ss_pred CCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcC-ceEEEEeCCHHHHHh-hhheeeeecceecc
Confidence 9999999999999999999999999999987765 799999999998876 99999999999975
No 398
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.3e-39 Score=372.92 Aligned_cols=216 Identities=27% Similarity=0.420 Sum_probs=187.3
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC---CCceEEEEcCeeCCCChHH
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY---PTDGTAFIFGKDIRSDPKA 1430 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~---p~~G~i~i~G~~i~~~~~~ 1430 (1723)
.+.++|++++|++.+ +.+.+++|+||+|++||++||+||||||||||+++|+|+++ |++|+|.++|+++. ...
T Consensus 3 ~~~~~~~~~~~~~~~--~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~--~~~ 78 (226)
T cd03234 3 VLPWWDVGLKAKNWN--KYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK--PDQ 78 (226)
T ss_pred cceeecceeeeecCc--cccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC--hHH
Confidence 467999999997531 13679999999999999999999999999999999999999 99999999999875 235
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHcCC---ChhhHHHHHHH-HHHHcCCccccCCCCCCCChhHHHHHHHHHHH
Q 000284 1431 ARRLIGYCPQFDALLEYLTVQEHLELYARIKGV---AEYRMDDVVME-KLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAM 1506 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~---~~~~~~~~~~~-~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al 1506 (1723)
.++++||+||++.+++.+|++||+.+.....+. ......+.+.+ .++.+++.+..++.+++|||||||||+|||||
T Consensus 79 ~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral 158 (226)
T cd03234 79 FQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLVKGISGGERRRVSIAVQL 158 (226)
T ss_pred hcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhcccccCcCHHHHHHHHHHHHH
Confidence 678899999999999999999999886554321 11222234455 88999998888999999999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCH-HHHHHHcCEEEEEECCEEEEec
Q 000284 1507 IGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSM-NEAQALCTRIGIMVGGQLRCIG 1575 (1723)
Q Consensus 1507 ~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~-~e~~~l~drv~im~~G~l~~~g 1575 (1723)
+.+|++|||||||+|||+.+++.+++.|+++++ +| .|||++||++ +++..+|||+++|++|++++.|
T Consensus 159 ~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~-~~-~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 159 LWDPKVLILDEPTSGLDSFTALNLVSTLSQLAR-RN-RIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CC-CEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 999999999999999999999999999999863 44 5899999999 6999999999999999998765
No 399
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=7.2e-40 Score=398.70 Aligned_cols=229 Identities=28% Similarity=0.470 Sum_probs=205.0
Q ss_pred cceEEEEeEEEEecCc-------CCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccC--
Q 000284 447 GRCIQIRKLHKVYATK-------RGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNI-- 517 (1723)
Q Consensus 447 ~~~i~i~~l~k~y~~~-------~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i-- 517 (1723)
.+.++++||+|.|..+ .+...||+||||++++||++||+|++|||||||.++|+|+++|++|+|.++|.+.
T Consensus 278 ~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~ 357 (539)
T COG1123 278 EPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDL 357 (539)
T ss_pred CceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCccccc
Confidence 3679999999999852 2346899999999999999999999999999999999999999999999999873
Q ss_pred C-ccHHHHhcceEEEccCC--CCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCCc-ccccccCCCChhHHHH
Q 000284 518 T-ADMDEIRKGLGVCPQYD--ILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGLAD-KVNIVVRALSGGMKRK 592 (1723)
Q Consensus 518 ~-~~~~~~r~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~v~~~l~~~~l~~-~~~~~~~~LSgGqkqr 592 (1723)
. .+....|+.+-+++|+| .|.|.+||.+.|.-...+++. ...+.++++.++++.+||.. ..++++++||||||||
T Consensus 358 ~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~VgL~~~~l~ryP~elSGGQrQR 437 (539)
T COG1123 358 TGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELVGLPPEFLDRYPHELSGGQRQR 437 (539)
T ss_pred ccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHcCCCHHHHhcCchhcCcchhHH
Confidence 2 23456778899999997 699999999999887776543 34666778999999999987 6899999999999999
Q ss_pred HHHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHH
Q 000284 593 LSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 670 (1723)
Q Consensus 593 l~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~L 670 (1723)
++|||||+.+|++|++|||||.||+..++++.++|+++++ |.|.|++||||+.++.+||||++|.+|++++.|+.+.+
T Consensus 438 vaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~~~~v 517 (539)
T COG1123 438 VAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGRIVEEGPTEKV 517 (539)
T ss_pred HHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999964 89999999999999999999999999999999988777
Q ss_pred HhhhC
Q 000284 671 KHQYG 675 (1723)
Q Consensus 671 k~~~g 675 (1723)
.+..-
T Consensus 518 ~~~p~ 522 (539)
T COG1123 518 FENPQ 522 (539)
T ss_pred hcCCC
Confidence 65433
No 400
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=2.1e-39 Score=380.12 Aligned_cols=228 Identities=25% Similarity=0.353 Sum_probs=195.1
Q ss_pred eEEEEeEEEEcCCCC---ccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h-
Q 000284 1354 IIYLRNLRKVYPGGK---RSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P- 1428 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~---~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-~- 1428 (1723)
+|+++||+|.|+.+. ...++.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... .
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 689999999996310 00135699999999999999999999999999999999999999999999999987542 2
Q ss_pred --HHhccceEEEecCC--CCCCCCCHHHHHHHHHH-HcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHH
Q 000284 1429 --KAARRLIGYCPQFD--ALLEYLTVQEHLELYAR-IKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSV 1502 (1723)
Q Consensus 1429 --~~~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~-~~g~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~kqrl~i 1502 (1723)
...++.+||+||++ .+++..|+.|++.+... ..+.......+.+.++++.+++. ...++++.+||||||||++|
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~Ge~qrl~l 162 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDDSVLDKRPPQLSGGQLQRVCL 162 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCChhHhhCCCccCChHHHHHHHH
Confidence 23567899999997 46677899999876433 22444444455788999999996 57899999999999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1503 AIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1503 A~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
||||+.+|++|||||||+|||+.+++.+.+.|++++++.+ +|||++||+++++..+|||+++|++|++++.|+++++.+
T Consensus 163 aral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~-~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~~ 241 (268)
T PRK10419 163 ARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFG-TACLFITHDLRLVERFCQRVMVMDNGQIVETQPVGDKLT 241 (268)
T ss_pred HHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcC-cEEEEEECCHHHHHHhCCEEEEEECCEEeeeCChhhccC
Confidence 9999999999999999999999999999999999864434 689999999999999999999999999999999888653
No 401
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-39 Score=388.51 Aligned_cols=222 Identities=26% Similarity=0.424 Sum_probs=196.0
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCC-----CCcceEEEccccCCc---
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA--- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~--- 519 (1723)
..|+++|+++.|.+. ...+|+|+||+|++||++||+|+||||||||+++|+|+.+ |++|+|.++|.++..
T Consensus 79 ~~i~~~nls~~y~~~--~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~ 156 (329)
T PRK14257 79 NVFEIRNFNFWYMNR--TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKI 156 (329)
T ss_pred ceEEEEeeEEEecCC--CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccc
Confidence 479999999999642 2469999999999999999999999999999999999986 579999999999853
Q ss_pred cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHH-HHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHH
Q 000284 520 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEE-LLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLS 594 (1723)
Q Consensus 520 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~-~~~~~v~~~l~~~~l~----~~~~~~~~~LSgGqkqrl~ 594 (1723)
....+|+.+|||||++.+|+ .|++||+.|.....+...+ ..++.+.++++.++|. +..++.+.+||||||||++
T Consensus 157 ~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~~~~LSgGqkqRl~ 235 (329)
T PRK14257 157 SSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVKDDLDKAGNALSGGQQQRLC 235 (329)
T ss_pred chHhhhccEEEEecCCccCC-CcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhhhhhhCCcccCCHHHHHHHH
Confidence 23467889999999999986 6999999986554444433 3345578889999874 3467889999999999999
Q ss_pred HHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 595 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 595 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
|||||+.+|+||||||||+|||+.+++.+++.|+++++++|||++||+++++..+||||++|++|++++.|++.++..
T Consensus 236 LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~ 313 (329)
T PRK14257 236 IARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFI 313 (329)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999999888999999999999999999999999999999999988753
No 402
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.3e-40 Score=377.23 Aligned_cols=220 Identities=25% Similarity=0.405 Sum_probs=189.6
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhcce
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKGL 528 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~i 528 (1723)
|+++|+++.|+++ ++.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +....++.+
T Consensus 1 i~~~~l~~~~~~~--~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 78 (234)
T cd03251 1 VEFKNVTFRYPGD--GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQI 78 (234)
T ss_pred CEEEEEEEEeCCC--CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhE
Confidence 4689999999643 1369999999999999999999999999999999999999999999999988753 345567889
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCCcccccccCCCChhHHHHHHHHHHHhc
Q 000284 529 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLES-----VVAEMVDEV--GLADKVNIVVRALSGGMKRKLSLGIALIG 601 (1723)
Q Consensus 529 g~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~-----~v~~~l~~~--~l~~~~~~~~~~LSgGqkqrl~lA~al~~ 601 (1723)
||+||++.+++ .||+||+.++... .......+ .+.+.++.+ ++.+..++++.+||||||||++|||||+.
T Consensus 79 ~~~~q~~~~~~-~tv~enl~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~ 155 (234)
T cd03251 79 GLVSQDVFLFN-DTVAENIAYGRPG--ATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLK 155 (234)
T ss_pred EEeCCCCeecc-ccHHHHhhccCCC--CCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhc
Confidence 99999998886 6999999875421 12222221 245566666 67777888899999999999999999999
Q ss_pred CCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhhhC
Q 000284 602 DSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYG 675 (1723)
Q Consensus 602 ~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~g 675 (1723)
+|+++||||||+|||+.+++.+++.|+++++++|||++||+++++.. |||+++|++|++++.|++.++...++
T Consensus 156 ~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~-~d~v~~l~~G~i~~~~~~~~~~~~~~ 228 (234)
T cd03251 156 DPPILILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIEN-ADRIVVLEDGKIVERGTHEELLAQGG 228 (234)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhh-CCEEEEecCCeEeeeCCHHHHHHcCc
Confidence 99999999999999999999999999999888999999999999986 99999999999999999988876654
No 403
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=380.93 Aligned_cols=219 Identities=27% Similarity=0.414 Sum_probs=192.8
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCC-----CCcceEEEccccCCc---
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA--- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~--- 519 (1723)
+.|+++||+|.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++..
T Consensus 9 ~~l~i~~v~~~~~~----~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~ 84 (264)
T PRK14243 9 TVLRTENLNVYYGS----FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDV 84 (264)
T ss_pred eEEEEeeeEEEECC----EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEcccccc
Confidence 47999999999953 469999999999999999999999999999999999986 489999999998742
Q ss_pred cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHHH
Q 000284 520 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLSL 595 (1723)
Q Consensus 520 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~----~~~~~~~~~LSgGqkqrl~l 595 (1723)
+....++.+||++|++.+++. |+.||+.+.....+.. ...++++.++++.+++. +..++.+.+||||||||++|
T Consensus 85 ~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~l 162 (264)
T PRK14243 85 DPVEVRRRIGMVFQKPNPFPK-SIYDNIAYGARINGYK-GDMDELVERSLRQAALWDEVKDKLKQSGLSLSGGQQQRLCI 162 (264)
T ss_pred ChHHHhhhEEEEccCCccccc-cHHHHHHhhhhhcCcc-hHHHHHHHHHHHHhCchhhHHHHhcCCcccCCHHHHHHHHH
Confidence 344567889999999988874 9999998876544432 23446677888888874 34688899999999999999
Q ss_pred HHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEe---------CCEEEEecC
Q 000284 596 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMA---------NGSLKCCGS 666 (1723)
Q Consensus 596 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~---------~G~l~~~Gs 666 (1723)
||||+.+|++|||||||+|||+.+++.++++|+++++++|||++||+++++..+||||++|+ +|++++.|+
T Consensus 163 aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~~~~ 242 (264)
T PRK14243 163 ARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVEFDR 242 (264)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEEeCC
Confidence 99999999999999999999999999999999999877899999999999999999999998 899999999
Q ss_pred HHHHHh
Q 000284 667 SLFLKH 672 (1723)
Q Consensus 667 ~~~Lk~ 672 (1723)
+.++.+
T Consensus 243 ~~~~~~ 248 (264)
T PRK14243 243 TEKIFN 248 (264)
T ss_pred HHHHHh
Confidence 988854
No 404
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.9e-39 Score=369.99 Aligned_cols=214 Identities=27% Similarity=0.455 Sum_probs=187.3
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h---H
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P---K 1429 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-~---~ 1429 (1723)
+++++|+++.|+++. +.+.+++|+||++++||++||+|+||||||||+++|+|+++|++|+|+++|.++... . .
T Consensus 1 ~l~~~~l~~~~~~~~--~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (220)
T TIGR02982 1 VISIRNLNHYYGHGS--LRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELV 78 (220)
T ss_pred CEEEEEEEEEccCCC--cceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHH
Confidence 378999999996421 125699999999999999999999999999999999999999999999999988532 1 2
Q ss_pred HhccceEEEecCCCCCCCCCHHHHHHHHHHHcC-CChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhc
Q 000284 1430 AARRLIGYCPQFDALLEYLTVQEHLELYARIKG-VAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIG 1508 (1723)
Q Consensus 1430 ~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~ 1508 (1723)
..++.+||+||++.+++.+|+.||+.+...... ....+..+.+.++++.+++.+..++++.+||||||||++|||||+.
T Consensus 79 ~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrv~laral~~ 158 (220)
T TIGR02982 79 QLRRNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHLDYYPHNLSGGQKQRVAIARALVH 158 (220)
T ss_pred HHHhheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhc
Confidence 356789999999999998999999988665442 3444556678899999999988999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEE
Q 000284 1509 DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQL 1571 (1723)
Q Consensus 1509 ~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l 1571 (1723)
+|++|||||||+|||+.+++.+++.|+++.++.+ +|||++||+++. ..+||||++|++|++
T Consensus 159 ~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sh~~~~-~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 159 RPKLVLADEPTAALDSKSGRDVVELMQKLAREQG-CTILIVTHDNRI-LDVADRIVHMEDGKL 219 (220)
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHH-HhhCCEEEEEECCEE
Confidence 9999999999999999999999999999864344 689999999985 468999999999986
No 405
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-39 Score=379.14 Aligned_cols=220 Identities=26% Similarity=0.420 Sum_probs=192.2
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeCCC-
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDIRS- 1426 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~-----p~~G~i~i~G~~i~~- 1426 (1723)
.+++++|++++|++ +.+++|+||+|++||++||+||||||||||+++|+|+++ |++|+|.++|.++..
T Consensus 24 ~~l~~~nl~~~~~~------~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~ 97 (272)
T PRK14236 24 TALEVRNLNLFYGD------KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDK 97 (272)
T ss_pred cEEEEEEEEEEECC------eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccc
Confidence 47999999999953 459999999999999999999999999999999999987 489999999999853
Q ss_pred --ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCC-hhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHH
Q 000284 1427 --DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVA-EYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRK 1499 (1723)
Q Consensus 1427 --~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~kqr 1499 (1723)
.....++.+||+||++.+++. |++||+.+.....+.. +...++.+.++++.+++. +..++++.+||||||||
T Consensus 98 ~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr 176 (272)
T PRK14236 98 KVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKDRLHENAFGLSGGQQQR 176 (272)
T ss_pred ccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHHHhhCCcccCCHHHHHH
Confidence 233567889999999988885 9999998765555542 223345677888888885 35688999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000284 1500 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1579 (1723)
Q Consensus 1500 l~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~ 1579 (1723)
++|||||+.+|++|||||||+|||+.+++.+++.|++++ + + .|||++||+++++..+|||+++|++|++++.|++++
T Consensus 177 v~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~-~-~-~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 253 (272)
T PRK14236 177 LVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELK-S-K-YTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTDT 253 (272)
T ss_pred HHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHH-h-C-CeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHHH
Confidence 999999999999999999999999999999999999985 3 4 589999999999999999999999999999999888
Q ss_pred HHh
Q 000284 1580 LKT 1582 (1723)
Q Consensus 1580 l~~ 1582 (1723)
+..
T Consensus 254 ~~~ 256 (272)
T PRK14236 254 LFT 256 (272)
T ss_pred Hhc
Confidence 753
No 406
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=8.3e-40 Score=369.37 Aligned_cols=200 Identities=26% Similarity=0.409 Sum_probs=180.1
Q ss_pred EEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc----c-HHHHhc
Q 000284 452 IRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA----D-MDEIRK 526 (1723)
Q Consensus 452 i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~----~-~~~~r~ 526 (1723)
++||++.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. . ....++
T Consensus 1 i~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 76 (206)
T TIGR03608 1 LKNISKKFGD----KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRRE 76 (206)
T ss_pred CcceEEEECC----EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHh
Confidence 4689999953 469999999999999999999999999999999999999999999999998642 1 223567
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEe
Q 000284 527 GLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVV 606 (1723)
Q Consensus 527 ~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vl 606 (1723)
.+||++|++.+++.+|++||+.+.....+....+..++++++++.+|+.+..++.+.+||||||||++||+||+.+|+++
T Consensus 77 ~i~~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qr~~laral~~~p~ll 156 (206)
T TIGR03608 77 KLGYLFQNFALIENETVEENLDLGLKYKKLSKKEKREKKKEALEKVGLNLKLKQKIYELSGGEQQRVALARAILKDPPLI 156 (206)
T ss_pred CeeEEecchhhccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCchhhhcCChhhCCHHHHHHHHHHHHHHcCCCEE
Confidence 89999999999999999999998766556666666778999999999998899999999999999999999999999999
Q ss_pred eccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEE
Q 000284 607 ILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIM 656 (1723)
Q Consensus 607 iLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il 656 (1723)
||||||+|||+.+++.++++|+++. +|+|||++||++++++ +||||++|
T Consensus 157 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~-~~d~i~~l 206 (206)
T TIGR03608 157 LADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVAK-QADRVIEL 206 (206)
T ss_pred EEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHh-hcCEEEeC
Confidence 9999999999999999999999985 4899999999999875 79999875
No 407
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=2.6e-39 Score=376.97 Aligned_cols=223 Identities=23% Similarity=0.375 Sum_probs=189.4
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCee-----CCC-
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKD-----IRS- 1426 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~-----i~~- 1426 (1723)
++|+++|+++.|++ +.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ +..
T Consensus 2 ~~l~~~~l~~~~~~------~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~ 75 (253)
T TIGR02323 2 PLLQVSGLSKSYGG------GKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQL 75 (253)
T ss_pred ceEEEeeeEEEeCC------ceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccC
Confidence 46899999999963 458999999999999999999999999999999999999999999999987 543
Q ss_pred ChHH----hccceEEEecCCC--CCCCCCHHHHHHHHHHHcC-CChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHH
Q 000284 1427 DPKA----ARRLIGYCPQFDA--LLEYLTVQEHLELYARIKG-VAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKR 1498 (1723)
Q Consensus 1427 ~~~~----~~~~ig~~pQ~~~--l~~~lTv~e~l~~~~~~~g-~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~kq 1498 (1723)
.... .++.+||++|++. +++.+|+.||+.......+ ......++.+.++++.+++. ...++.+.+|||||||
T Consensus 76 ~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~LSgG~~q 155 (253)
T TIGR02323 76 SEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDPTRIDDLPRAFSGGMQQ 155 (253)
T ss_pred CHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCChhhhhcCchhcCHHHHH
Confidence 2221 2467999999974 4556789999865322111 11223446778899999997 4789999999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChh
Q 000284 1499 KLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQ 1578 (1723)
Q Consensus 1499 rl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~ 1578 (1723)
||+|||||+.+|++|||||||+|||+.+++.+++.|+++.++.| .|||++||+++++..+|||+++|++|+++..|+++
T Consensus 156 rv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~~~~~ 234 (253)
T TIGR02323 156 RLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLG-LAVIIVTHDLGVARLLAQRLLVMQQGRVVESGLTD 234 (253)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhcCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999999999999864434 58999999999999999999999999999999988
Q ss_pred HHHh
Q 000284 1579 HLKT 1582 (1723)
Q Consensus 1579 ~l~~ 1582 (1723)
++.+
T Consensus 235 ~~~~ 238 (253)
T TIGR02323 235 QVLD 238 (253)
T ss_pred HHhc
Confidence 8754
No 408
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-39 Score=376.14 Aligned_cols=219 Identities=25% Similarity=0.419 Sum_probs=190.9
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCCC--
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIRS-- 1426 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p-----~~G~i~i~G~~i~~-- 1426 (1723)
+++++|++|.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++..
T Consensus 3 ~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~ 76 (249)
T PRK14253 3 KFNIENLDLFYGE------NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNI 76 (249)
T ss_pred eEEEeccEEEECC------eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEccccc
Confidence 5899999999963 4599999999999999999999999999999999999986 59999999998842
Q ss_pred ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCC-hhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHHHH
Q 000284 1427 DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVA-EYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRKLS 1501 (1723)
Q Consensus 1427 ~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~kqrl~ 1501 (1723)
.....++.+||+||++.+++ .|+.||+.+.....+.. ....++++.+.++.+++. +..++++.+|||||||||+
T Consensus 77 ~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~ 155 (249)
T PRK14253 77 DVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVKDRLKSHAFGLSGGQQQRLC 155 (249)
T ss_pred chHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhhHHhhcCcccCCHHHHHHHH
Confidence 34456778999999998887 89999998754444432 233445677788888874 4567899999999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000284 1502 VAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1581 (1723)
Q Consensus 1502 iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~ 1581 (1723)
|||||+.+|+||||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|++|+++..|+++++.
T Consensus 156 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~-~-~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 156 IARTIAMEPDVILMDEPTSALDPIATHKIEELMEELK-K-N-YTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIF 232 (249)
T ss_pred HHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c-C-CeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999999999999999999985 3 3 58999999999999999999999999999999988774
Q ss_pred h
Q 000284 1582 T 1582 (1723)
Q Consensus 1582 ~ 1582 (1723)
+
T Consensus 233 ~ 233 (249)
T PRK14253 233 S 233 (249)
T ss_pred c
Confidence 3
No 409
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=8.6e-40 Score=416.74 Aligned_cols=220 Identities=24% Similarity=0.408 Sum_probs=194.3
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-hH-H
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-PK-A 1430 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-~~-~ 1430 (1723)
++|+++|++|+|++ +.+++|+||+|++||++||+||||||||||+|+|+|+++|++|+|.++|.++... .. .
T Consensus 3 ~~i~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~ 76 (501)
T PRK10762 3 ALLQLKGIDKAFPG------VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSS 76 (501)
T ss_pred ceEEEeeeEEEeCC------eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHH
Confidence 47999999999953 4699999999999999999999999999999999999999999999999998542 22 2
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHc---C-CChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHH
Q 000284 1431 ARRLIGYCPQFDALLEYLTVQEHLELYARIK---G-VAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAM 1506 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~---g-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al 1506 (1723)
.++++||+||++.+++.+||+||+.+....+ + .+..+.++++.++++.+++.+..++++++|||||||||+||+||
T Consensus 77 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al 156 (501)
T PRK10762 77 QEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLVGELSIGEQQMVEIAKVL 156 (501)
T ss_pred HhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCchhhCCHHHHHHHHHHHHH
Confidence 3567999999999999999999998754322 1 22333456788899999999888999999999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000284 1507 IGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1580 (1723)
Q Consensus 1507 ~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l 1580 (1723)
+.+|++|||||||+|||+.+++.+++.|++++ +.| +|||++|||+++++.+||||++|++|++++.|+++++
T Consensus 157 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~-~~~-~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (501)
T PRK10762 157 SFESKVIIMDEPTDALTDTETESLFRVIRELK-SQG-RGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADL 228 (501)
T ss_pred hcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHH-HCC-CEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcC
Confidence 99999999999999999999999999999986 344 5899999999999999999999999999999988754
No 410
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-39 Score=375.60 Aligned_cols=221 Identities=22% Similarity=0.405 Sum_probs=192.1
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCC-----ceEEEEcCeeCCC-
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPT-----DGTAFIFGKDIRS- 1426 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~-----~G~i~i~G~~i~~- 1426 (1723)
++|+++|++|+|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|+ +|+|.++|.++..
T Consensus 3 ~~l~~~~l~~~~~~------~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~ 76 (251)
T PRK14249 3 PKIKIRGVNFFYHK------HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSP 76 (251)
T ss_pred ceEEEEEEEEEECC------eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEcccc
Confidence 46899999999953 45999999999999999999999999999999999999997 6999999998753
Q ss_pred --ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCCh-hhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHH
Q 000284 1427 --DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAE-YRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRK 1499 (1723)
Q Consensus 1427 --~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~-~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~kqr 1499 (1723)
.....++.+||+||++.+++. |++||+.+....++... +..++.+.+.++.+++. +..++++.+||||||||
T Consensus 77 ~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qr 155 (251)
T PRK14249 77 NLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKDNLHKSGLALSGGQQQR 155 (251)
T ss_pred ccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhhHhhCCcccCCHHHHHH
Confidence 233567889999999988874 99999987655544432 23445667778888864 45789999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000284 1500 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1579 (1723)
Q Consensus 1500 l~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~ 1579 (1723)
++|||||+.+|++|||||||+|||+.+++.++++|+++. + + +|||++||+++++..+|||+++|++|++++.|++++
T Consensus 156 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 232 (251)
T PRK14249 156 LCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-Q-N-YTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGE 232 (251)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c-C-CEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHH
Confidence 999999999999999999999999999999999999983 3 4 589999999999999999999999999999999988
Q ss_pred HHhh
Q 000284 1580 LKTR 1583 (1723)
Q Consensus 1580 l~~~ 1583 (1723)
+...
T Consensus 233 ~~~~ 236 (251)
T PRK14249 233 IFSR 236 (251)
T ss_pred HHhC
Confidence 7643
No 411
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-39 Score=376.44 Aligned_cols=220 Identities=29% Similarity=0.454 Sum_probs=192.7
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCC--C---CcceEEEccccCCc---
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP--P---TTGDALVFGKNITA--- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~--p---~~G~i~i~g~~i~~--- 519 (1723)
..|+++||+|.|+. +.+++|+||++.+||+++|+|+||||||||+++|+|+.+ | ++|+|.++|.++..
T Consensus 4 ~~l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 79 (252)
T PRK14255 4 KIITSSDVHLFYGK----FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNE 79 (252)
T ss_pred ceEEEEeEEEEECC----eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccc
Confidence 46999999999953 469999999999999999999999999999999999975 5 59999999998742
Q ss_pred cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHH
Q 000284 520 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVK-EELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLS 594 (1723)
Q Consensus 520 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~v~~~l~~~~l~----~~~~~~~~~LSgGqkqrl~ 594 (1723)
+....++.+||+||++.+++ .|++||+.+.....+.. .+..++++.+.++.+++. +..++.+.+||||||||++
T Consensus 80 ~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~Gq~qrv~ 158 (252)
T PRK14255 80 DVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVKDHLHESALSLSGGQQQRVC 158 (252)
T ss_pred cHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchhhHHhcCcccCCHHHHHHHH
Confidence 23456788999999999888 69999998876555543 233456677888888764 4568889999999999999
Q ss_pred HHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 595 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 595 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
|||||+.+|+++||||||+|||+.+++.+.++|+++++++|||++||+++++..+||||++|++|+++..|++..+..
T Consensus 159 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 236 (252)
T PRK14255 159 IARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQMFL 236 (252)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999998767899999999999999999999999999999998866643
No 412
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-39 Score=376.38 Aligned_cols=220 Identities=26% Similarity=0.416 Sum_probs=191.8
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC--C---CceEEEEcCeeCCCC
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY--P---TDGTAFIFGKDIRSD 1427 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~--p---~~G~i~i~G~~i~~~ 1427 (1723)
++|+++|+++.|++ +.+++|+||++++||++||+||||||||||+++|+|+.+ | ++|+|.++|+++...
T Consensus 5 ~~i~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~ 78 (253)
T PRK14261 5 IILSTKNLNLWYGE------KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDS 78 (253)
T ss_pred ceEEEeeeEEEECC------eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccc
Confidence 57999999999953 469999999999999999999999999999999999976 3 489999999998642
Q ss_pred ---hHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCC-hhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHH
Q 000284 1428 ---PKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVA-EYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRK 1499 (1723)
Q Consensus 1428 ---~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~kqr 1499 (1723)
....++.+||+||++.+++ .||+||+.+....++.. ....++.+.++++.+++. +..++++.+||||||||
T Consensus 79 ~~~~~~~~~~i~~~~q~~~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qr 157 (253)
T PRK14261 79 GADVVALRRKIGMVFQRPNPFP-KSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVKDRLHDSALSLSGGQQQR 157 (253)
T ss_pred ccchhhhhceEEEEecCCccCc-ccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhHHHhhcChhhCCHHHHHH
Confidence 3455778999999998887 49999999876655532 233455677888888874 34689999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000284 1500 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1579 (1723)
Q Consensus 1500 l~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~ 1579 (1723)
++|||||+.+|+++||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|++|++++.|++++
T Consensus 158 v~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~-~-~-~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 234 (253)
T PRK14261 158 LCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLK-K-E-YTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQ 234 (253)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-h-C-ceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHH
Confidence 999999999999999999999999999999999999985 3 3 589999999999999999999999999999999988
Q ss_pred HHh
Q 000284 1580 LKT 1582 (1723)
Q Consensus 1580 l~~ 1582 (1723)
+..
T Consensus 235 ~~~ 237 (253)
T PRK14261 235 IFE 237 (253)
T ss_pred HHh
Confidence 754
No 413
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-39 Score=381.18 Aligned_cols=217 Identities=24% Similarity=0.319 Sum_probs=190.8
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCC--------cceEEEccccCCc-c
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPT--------TGDALVFGKNITA-D 520 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~--------~G~i~i~g~~i~~-~ 520 (1723)
++++||++.|++ +.+++|+||+|.+||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.. .
T Consensus 2 l~~~nl~~~~~~----~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~ 77 (272)
T PRK13547 2 LTADHLHVARRH----RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAID 77 (272)
T ss_pred eEEEEEEEEECC----EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCC
Confidence 789999999953 46999999999999999999999999999999999999998 9999999998753 3
Q ss_pred HHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhc----CCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHH
Q 000284 521 MDEIRKGLGVCPQYDILFPELTVREHLEMFAVLK----GVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLG 596 (1723)
Q Consensus 521 ~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~----g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA 596 (1723)
....++.+||+||++.++..+|++||+.+..... +....+.++++.++++.+|+.+..++++.+||||||||++||
T Consensus 78 ~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la 157 (272)
T PRK13547 78 APRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRDVTTLSGGELARVQFA 157 (272)
T ss_pred HHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHH
Confidence 4456677999999987656689999998753211 111233456788999999999989999999999999999999
Q ss_pred HHHh---------cCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEec
Q 000284 597 IALI---------GDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 665 (1723)
Q Consensus 597 ~al~---------~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~G 665 (1723)
|||+ .+|++|||||||+|||+.+++.++++|++++ + |+|||++||+++++..+|||+++|++|+++..|
T Consensus 158 ral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~~~g 237 (272)
T PRK13547 158 RVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIVAHG 237 (272)
T ss_pred HHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEEec
Confidence 9999 5999999999999999999999999999985 3 899999999999999999999999999999999
Q ss_pred CHHHH
Q 000284 666 SSLFL 670 (1723)
Q Consensus 666 s~~~L 670 (1723)
++.++
T Consensus 238 ~~~~~ 242 (272)
T PRK13547 238 APADV 242 (272)
T ss_pred CHHHH
Confidence 87665
No 414
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-39 Score=364.29 Aligned_cols=197 Identities=20% Similarity=0.281 Sum_probs=172.3
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC---CCceEEEEcCeeCCCChHH
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY---PTDGTAFIFGKDIRSDPKA 1430 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~---p~~G~i~i~G~~i~~~~~~ 1430 (1723)
.+.++|++|.|+.+. +++.+++++||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++......
T Consensus 3 ~~~~~~~~~~~~~~~--~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~~~ 80 (202)
T cd03233 3 TLSWRNISFTTGKGR--SKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFAEK 80 (202)
T ss_pred eEEEEccEEEeccCC--CCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccchhh
Confidence 478999999998642 35679999999999999999999999999999999999999 8999999999998654445
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000284 1431 ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1510 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p 1510 (1723)
.++.+||+||++.+++.+|++||+.+..... .++++..||||||||++||+||+.+|
T Consensus 81 ~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----------------------~~~~~~~LS~Ge~qrl~laral~~~p 137 (202)
T cd03233 81 YPGEIIYVSEEDVHFPTLTVRETLDFALRCK-----------------------GNEFVRGISGGERKRVSIAEALVSRA 137 (202)
T ss_pred hcceEEEEecccccCCCCcHHHHHhhhhhhc-----------------------cccchhhCCHHHHHHHHHHHHHhhCC
Confidence 6778999999999999999999998653211 56788999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000284 1511 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1575 (1723)
Q Consensus 1511 ~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g 1575 (1723)
++|||||||+|||+.+++.+++.|++++++.+.++||+++|+++++.++|||+++|++|+++..|
T Consensus 138 ~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 138 SVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred CEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 99999999999999999999999999865434334555667789999999999999999998654
No 415
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-39 Score=379.34 Aligned_cols=223 Identities=19% Similarity=0.382 Sum_probs=191.7
Q ss_pred CCcceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeC
Q 000284 1350 VDNAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDI 1424 (1723)
Q Consensus 1350 ~~~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~-----p~~G~i~i~G~~i 1424 (1723)
+..++++++|+++.|++ +.+++|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|+++
T Consensus 20 ~~~~~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~ 93 (271)
T PRK14238 20 PKKVVFDTQNLNLWYGE------DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNI 93 (271)
T ss_pred CCceEEEEeeeEEEECC------cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEc
Confidence 34568999999999963 458999999999999999999999999999999999997 6999999999988
Q ss_pred CC---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCCh-hhHHHHHHHHHHHcC----CccccCCCCCCCChhH
Q 000284 1425 RS---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAE-YRMDDVVMEKLVEFD----LLKHAKKPSFTLSGGN 1496 (1723)
Q Consensus 1425 ~~---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~-~~~~~~~~~~l~~~~----l~~~~~~~~~~LSgG~ 1496 (1723)
.. .....++.+||+||++.+++ .|++||+.+.....+... ...++.+.+.++.++ +.+..++++.+|||||
T Consensus 94 ~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~LSgGe 172 (271)
T PRK14238 94 FDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDELKDRLHDNAYGLSGGQ 172 (271)
T ss_pred ccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchHHHHHhcCcccCCHHH
Confidence 42 23455778999999998887 599999987654444332 233445667777775 3455788999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecC
Q 000284 1497 KRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGS 1576 (1723)
Q Consensus 1497 kqrl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~ 1576 (1723)
|||++|||||+.+|++|||||||+|||+.+++.+.+.|++++ + + +|||++||+++++..+|||+++|++|+++..|+
T Consensus 173 ~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~ 249 (271)
T PRK14238 173 QQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELK-K-D-YSIIIVTHNMQQAARISDKTAFFLNGYVNEYDD 249 (271)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHH-c-C-CEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 999999999999999999999999999999999999999985 3 4 589999999999999999999999999999999
Q ss_pred hhHHHh
Q 000284 1577 PQHLKT 1582 (1723)
Q Consensus 1577 ~~~l~~ 1582 (1723)
++++.+
T Consensus 250 ~~~~~~ 255 (271)
T PRK14238 250 TDKIFS 255 (271)
T ss_pred HHHHHc
Confidence 988754
No 416
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-39 Score=422.11 Aligned_cols=225 Identities=24% Similarity=0.365 Sum_probs=200.0
Q ss_pred ceEEEEeEEEEecCcC-------CccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCcc
Q 000284 448 RCIQIRKLHKVYATKR-------GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITAD 520 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~-------~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~ 520 (1723)
+.++++||+|.|+... +.+.+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|+++|.++...
T Consensus 312 ~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~ 391 (623)
T PRK10261 312 PILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTL 391 (623)
T ss_pred ceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEEECCEECCcC
Confidence 5799999999996321 124699999999999999999999999999999999999999999999999988531
Q ss_pred ----HHHHhcceEEEccCC--CCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCC-cccccccCCCChhHHHH
Q 000284 521 ----MDEIRKGLGVCPQYD--ILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGLA-DKVNIVVRALSGGMKRK 592 (1723)
Q Consensus 521 ----~~~~r~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~v~~~l~~~~l~-~~~~~~~~~LSgGqkqr 592 (1723)
....|++|||+||++ .+++.+||.||+.+....++. ...+.++++.++|+.+||. +..++++++||||||||
T Consensus 392 ~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~~LSgGqrQR 471 (623)
T PRK10261 392 SPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQR 471 (623)
T ss_pred CHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHH
Confidence 234567899999997 589999999999886655554 3445667899999999996 57899999999999999
Q ss_pred HHHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHH
Q 000284 593 LSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 670 (1723)
Q Consensus 593 l~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~L 670 (1723)
|+|||||+.+|++|||||||+|||+.++++++++|++++ + |.|||++|||++++..+||||++|++|++++.|++.++
T Consensus 472 v~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~~v~~~~dri~vl~~G~iv~~g~~~~i 551 (623)
T PRK10261 472 ICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAV 551 (623)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 999999999999999999999999999999999999985 3 89999999999999999999999999999999999887
Q ss_pred Hh
Q 000284 671 KH 672 (1723)
Q Consensus 671 k~ 672 (1723)
..
T Consensus 552 ~~ 553 (623)
T PRK10261 552 FE 553 (623)
T ss_pred hc
Confidence 54
No 417
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1.1e-39 Score=374.11 Aligned_cols=200 Identities=28% Similarity=0.430 Sum_probs=177.0
Q ss_pred eeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccceEEEecCCCCCCCCCHHHHHH
Q 000284 1376 VHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRLIGYCPQFDALLEYLTVQEHLE 1455 (1723)
Q Consensus 1376 l~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~ 1455 (1723)
++++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++..... ..+|+||++.+++.+|++||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~----~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGP----DRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCh----hheEEecCcccCCCCCHHHHHH
Confidence 578999999999999999999999999999999999999999999998864221 2589999999999999999998
Q ss_pred HHHH--HcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH
Q 000284 1456 LYAR--IKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEV 1533 (1723)
Q Consensus 1456 ~~~~--~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~ 1533 (1723)
+... ..+..+.+.++++.++++.+++.+..++++.+||||||||++||+||+.+|++|||||||+|||+.+++.+++.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~ 156 (230)
T TIGR01184 77 LAVDRVLPDLSKSERRAIVEEHIALVGLTEAADKRPGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEE 156 (230)
T ss_pred HHHHhcccCCCHHHHHHHHHHHHHHcCCHHHHcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHH
Confidence 7532 22344444556678899999999889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000284 1534 ISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1580 (1723)
Q Consensus 1534 l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l 1580 (1723)
|++++++.| +|||++||+++++..+|||+++|++|++++.|++.++
T Consensus 157 l~~~~~~~~-~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 202 (230)
T TIGR01184 157 LMQIWEEHR-VTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILEV 202 (230)
T ss_pred HHHHHHhcC-CEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCceec
Confidence 999864444 5899999999999999999999999999988876554
No 418
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-39 Score=377.22 Aligned_cols=220 Identities=23% Similarity=0.413 Sum_probs=194.8
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCC-----cceEEEccccCCc---
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPT-----TGDALVFGKNITA--- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~-----~G~i~i~g~~i~~--- 519 (1723)
..|+++|++|.|++ ..+++|+||++++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++..
T Consensus 6 ~~l~~~nl~~~~~~----~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~ 81 (261)
T PRK14258 6 PAIKVNNLSFYYDT----QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRV 81 (261)
T ss_pred ceEEEeeEEEEeCC----eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhcccc
Confidence 36999999999953 35999999999999999999999999999999999999996 8999999998742
Q ss_pred cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCCc----ccccccCCCChhHHHHHH
Q 000284 520 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGLAD----KVNIVVRALSGGMKRKLS 594 (1723)
Q Consensus 520 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~v~~~l~~~~l~~----~~~~~~~~LSgGqkqrl~ 594 (1723)
....+|+.++|+||++.+++ +|+.||+.+.....+. +..+.++++.++++.+++.+ ..++.+.+||||||||++
T Consensus 82 ~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~ 160 (261)
T PRK14258 82 NLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKHKIHKSALDLSGGQQQRLC 160 (261)
T ss_pred chHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHHHHHHH
Confidence 33456788999999998888 8999999887655554 33444567889999999853 568889999999999999
Q ss_pred HHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeC-----CEEEEecCH
Q 000284 595 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMAN-----GSLKCCGSS 667 (1723)
Q Consensus 595 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~-----G~l~~~Gs~ 667 (1723)
|||||+.+|+++||||||+|||+.+++.+++.|++++ +|+|||++||+++++..+||||++|++ |+++..|++
T Consensus 161 laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~~~ 240 (261)
T PRK14258 161 IARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVEFGLT 240 (261)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEEeCCH
Confidence 9999999999999999999999999999999999974 489999999999999999999999999 999999999
Q ss_pred HHHHh
Q 000284 668 LFLKH 672 (1723)
Q Consensus 668 ~~Lk~ 672 (1723)
.++.+
T Consensus 241 ~~~~~ 245 (261)
T PRK14258 241 KKIFN 245 (261)
T ss_pred HHHHh
Confidence 88743
No 419
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-39 Score=376.72 Aligned_cols=220 Identities=23% Similarity=0.395 Sum_probs=191.4
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCCC-
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIRS- 1426 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p-----~~G~i~i~G~~i~~- 1426 (1723)
.+|+++|++|.|++ +.+++|+||+|++||++||+|+||||||||+|+|+|+++| ++|+|.++|+++..
T Consensus 6 ~~l~~~~l~~~~~~------~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~ 79 (259)
T PRK14260 6 PAIKVKDLSFYYNT------SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDP 79 (259)
T ss_pred ceEEEEEEEEEECC------eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEecccc
Confidence 36899999999953 4599999999999999999999999999999999999985 58999999998853
Q ss_pred --ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcC-CChhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHH
Q 000284 1427 --DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKG-VAEYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRK 1499 (1723)
Q Consensus 1427 --~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g-~~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~kqr 1499 (1723)
.....++++||+||++.+++ +|++||+.+....++ .++.+..+.+.++++.+++. +..++++.+||||||||
T Consensus 80 ~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qr 158 (259)
T PRK14260 80 RININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDKLNKSALGLSGGQQQR 158 (259)
T ss_pred ccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHHHHH
Confidence 22445678999999998887 899999987654443 23334455677888988873 46788999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEE-----CCEEEEe
Q 000284 1500 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMV-----GGQLRCI 1574 (1723)
Q Consensus 1500 l~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~-----~G~l~~~ 1574 (1723)
++|||||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|+ +|++++.
T Consensus 159 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~ 235 (259)
T PRK14260 159 LCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLR-S-E-LTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEF 235 (259)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-c-C-CEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEe
Confidence 999999999999999999999999999999999999985 3 3 589999999999999999999998 5999999
Q ss_pred cChhHHHh
Q 000284 1575 GSPQHLKT 1582 (1723)
Q Consensus 1575 g~~~~l~~ 1582 (1723)
|+++++.+
T Consensus 236 ~~~~~~~~ 243 (259)
T PRK14260 236 GVTTQIFS 243 (259)
T ss_pred CCHHHHhc
Confidence 99998753
No 420
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.3e-39 Score=366.89 Aligned_cols=201 Identities=27% Similarity=0.357 Sum_probs=182.3
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcce
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGL 528 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~i 528 (1723)
.++++|+++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.......++++
T Consensus 1 ~l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~~~~~~~~ 76 (204)
T PRK13538 1 MLEARNLACERDE----RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQRDEYHQDL 76 (204)
T ss_pred CeEEEEEEEEECC----EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccchHHhhhhe
Confidence 3789999999953 469999999999999999999999999999999999999999999999998865445567889
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeec
Q 000284 529 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVIL 608 (1723)
Q Consensus 529 g~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliL 608 (1723)
+|++|++.+++.+|+.||+.++....+. ..+++++++++.+||.+..++++.+||||||||++||+||+.+|+++||
T Consensus 77 ~~~~~~~~~~~~~tv~e~l~~~~~~~~~---~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~la~al~~~p~llll 153 (204)
T PRK13538 77 LYLGHQPGIKTELTALENLRFYQRLHGP---GDDEALWEALAQVGLAGFEDVPVRQLSAGQQRRVALARLWLTRAPLWIL 153 (204)
T ss_pred EEeCCccccCcCCcHHHHHHHHHHhcCc---cHHHHHHHHHHHcCCHHHhhCChhhcCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999999999999999999987655442 2346788999999999888999999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEE
Q 000284 609 DEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIM 656 (1723)
Q Consensus 609 DEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il 656 (1723)
||||+|||+.+++.++++|++++ +|+|||++||++++++...+|++.+
T Consensus 154 DEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 154 DEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred eCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 99999999999999999999985 5899999999999999988888776
No 421
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=1.4e-39 Score=373.56 Aligned_cols=204 Identities=27% Similarity=0.420 Sum_probs=182.2
Q ss_pred eeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCC----CcceEEEccccCCccHHHHhcceEEEccCCC--CCCCC
Q 000284 468 AVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP----TTGDALVFGKNITADMDEIRKGLGVCPQYDI--LFPEL 541 (1723)
Q Consensus 468 al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p----~~G~i~i~g~~i~~~~~~~r~~ig~~~Q~~~--l~~~l 541 (1723)
+++|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++... +..++.+||++|++. +++.+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~-~~~~~~i~~~~q~~~~~~~~~~ 79 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPL-SIRGRHIATIMQNPRTAFNPLF 79 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhh-hhhhheeEEEecCchhhcCccc
Confidence 57899999999999999999999999999999999999 899999999987532 233468999999984 55678
Q ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC---cccccccCCCChhHHHHHHHHHHHhcCCcEeeccCCCCCCCHH
Q 000284 542 TVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA---DKVNIVVRALSGGMKRKLSLGIALIGDSKVVILDEPTSGMDPY 618 (1723)
Q Consensus 542 Tv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~---~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLDEPtsgLD~~ 618 (1723)
|+.||+.+.....+......++++.++++.+++. +..++++.+|||||||||+|||||+.+|+++||||||+|||+.
T Consensus 80 t~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~ 159 (230)
T TIGR02770 80 TMGNHAIETLRSLGKLSKQARALILEALEAVGLPDPEEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVV 159 (230)
T ss_pred CHHHHHHHHHHHcCccHHHHHHHHHHHHHHcCCCchHHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHH
Confidence 9999998766555544445567899999999998 5678999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 619 SMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 619 ~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
+++.+++.|++++ .|+|||++||+++++..+|||+++|++|++.+.|++.++..
T Consensus 160 ~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 215 (230)
T TIGR02770 160 NQARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEIFY 215 (230)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 9999999999985 38999999999999999999999999999999999988754
No 422
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-39 Score=375.09 Aligned_cols=222 Identities=22% Similarity=0.381 Sum_probs=193.3
Q ss_pred cceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcC------eeCC
Q 000284 1352 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFG------KDIR 1425 (1723)
Q Consensus 1352 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G------~~i~ 1425 (1723)
.+++.++|++|+|++ +.+++|+||++++||++||+|+||||||||+++|+|+++|++|+|.++| .++.
T Consensus 8 ~~~i~~~~~~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~ 81 (257)
T PRK14246 8 EDVFNISRLYLYIND------KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIF 81 (257)
T ss_pred hhheeeeeEEEecCC------ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccc
Confidence 367999999999963 5699999999999999999999999999999999999999997776665 4443
Q ss_pred C-ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCC-ChhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHH
Q 000284 1426 S-DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGV-AEYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRK 1499 (1723)
Q Consensus 1426 ~-~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~kqr 1499 (1723)
. .....++.+||+||++.+++.+|++||+.+.....+. ++.+..+.+.++++.+++. +..++++..||||||||
T Consensus 82 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qr 161 (257)
T PRK14246 82 QIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVYDRLNSPASQLSGGQQQR 161 (257)
T ss_pred cCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccchhhhcCCcccCCHHHHHH
Confidence 2 3345678899999999999889999999886554443 2334556778899999985 35688999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000284 1500 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1579 (1723)
Q Consensus 1500 l~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~ 1579 (1723)
++|||||+.+|++|||||||+|||+.+++.+++.|.+++ + + +|||++||+++++..+|||+++|++|++++.|++++
T Consensus 162 l~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~ 238 (257)
T PRK14246 162 LTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELK-N-E-IAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNE 238 (257)
T ss_pred HHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-c-C-cEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999999999999999984 3 3 689999999999999999999999999999999988
Q ss_pred HHh
Q 000284 1580 LKT 1582 (1723)
Q Consensus 1580 l~~ 1582 (1723)
+.+
T Consensus 239 ~~~ 241 (257)
T PRK14246 239 IFT 241 (257)
T ss_pred HHh
Confidence 764
No 423
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-39 Score=378.82 Aligned_cols=219 Identities=25% Similarity=0.386 Sum_probs=192.0
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCC-----CcceEEEccccCCc---
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA--- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~--- 519 (1723)
+.|+++||++.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++..
T Consensus 19 ~~l~~~nl~~~~~~----~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~ 94 (274)
T PRK14265 19 SVFEVEGVKVFYGG----FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQI 94 (274)
T ss_pred ceEEEeeEEEEeCC----eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccc
Confidence 57999999999953 4699999999999999999999999999999999999863 69999999998742
Q ss_pred cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHHH
Q 000284 520 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLSL 595 (1723)
Q Consensus 520 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~----~~~~~~~~~LSgGqkqrl~l 595 (1723)
.....|+.+||+||++.+++. ||.||+.+....++.. ...++.+.++++.+++. +..++++.+||||||||++|
T Consensus 95 ~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~L 172 (274)
T PRK14265 95 NSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANGYK-GNLDELVEDSLRRAAIWEEVKDKLKEKGTALSGGQQQRLCI 172 (274)
T ss_pred hhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcCch-HHHHHHHHHHHHHcccchhhHHHhcCCcccCCHHHHHHHHH
Confidence 234567889999999988875 9999998865544432 22345677788888873 45688899999999999999
Q ss_pred HHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEe---------CCEEEEecC
Q 000284 596 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMA---------NGSLKCCGS 666 (1723)
Q Consensus 596 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~---------~G~l~~~Gs 666 (1723)
||||+.+|++|||||||+|||+.+++.++++|+++++++|||++||+++++..+|||+++|+ +|++++.|+
T Consensus 173 AraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~~g~ 252 (274)
T PRK14265 173 ARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVEFSP 252 (274)
T ss_pred HHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEEeCC
Confidence 99999999999999999999999999999999999878999999999999999999999997 899999999
Q ss_pred HHHHHh
Q 000284 667 SLFLKH 672 (1723)
Q Consensus 667 ~~~Lk~ 672 (1723)
+.++.+
T Consensus 253 ~~~~~~ 258 (274)
T PRK14265 253 TEQMFG 258 (274)
T ss_pred HHHHHh
Confidence 877743
No 424
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-39 Score=377.72 Aligned_cols=220 Identities=24% Similarity=0.378 Sum_probs=192.3
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCCCC
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIRSD 1427 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p-----~~G~i~i~G~~i~~~ 1427 (1723)
++|+++|++|+|++ +.+++|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|.++...
T Consensus 20 ~~l~i~nl~~~~~~------~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~ 93 (276)
T PRK14271 20 PAMAAVNLTLGFAG------KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNY 93 (276)
T ss_pred cEEEEeeEEEEECC------EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEcccc
Confidence 47999999999963 4699999999999999999999999999999999999986 799999999988642
Q ss_pred --hHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcC-CChhhHHHHHHHHHHHcCCcc----ccCCCCCCCChhHHHHH
Q 000284 1428 --PKAARRLIGYCPQFDALLEYLTVQEHLELYARIKG-VAEYRMDDVVMEKLVEFDLLK----HAKKPSFTLSGGNKRKL 1500 (1723)
Q Consensus 1428 --~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g-~~~~~~~~~~~~~l~~~~l~~----~~~~~~~~LSgG~kqrl 1500 (1723)
....+++++|+||++.+++ +|++||+.+.....+ .+..+..+.+.++++.+++.+ ..++.+.+||||||||+
T Consensus 94 ~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl 172 (276)
T PRK14271 94 RDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVKDRLSDSPFRLSGGQQQLL 172 (276)
T ss_pred chhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchhhhHhhCCcccCCHHHHHHH
Confidence 3356778999999998887 899999987543322 233444456677889999863 35788999999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000284 1501 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1580 (1723)
Q Consensus 1501 ~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l 1580 (1723)
+|||||+.+|++|||||||+|||+.+++.+.+.|++++ + + +|||++||+++++..+|||+++|++|+++..|+++++
T Consensus 173 ~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~-~-~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~ 249 (276)
T PRK14271 173 CLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLA-D-R-LTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQL 249 (276)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh-c-C-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999985 3 3 5899999999999999999999999999999999988
Q ss_pred Hh
Q 000284 1581 KT 1582 (1723)
Q Consensus 1581 ~~ 1582 (1723)
.+
T Consensus 250 ~~ 251 (276)
T PRK14271 250 FS 251 (276)
T ss_pred Hh
Confidence 64
No 425
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-39 Score=375.55 Aligned_cols=219 Identities=26% Similarity=0.374 Sum_probs=193.8
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCC-----CcceEEEccccCCc---
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA--- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~--- 519 (1723)
..+.++++++.|+ ++.+++|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++..
T Consensus 7 ~~~~~~~~~~~~~----~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~ 82 (261)
T PRK14263 7 IVMDCKLDKIFYG----NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGV 82 (261)
T ss_pred ceEEEEeEEEEeC----CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEecccccc
Confidence 5789999999994 34699999999999999999999999999999999999987 79999999998752
Q ss_pred cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCc----ccccccCCCChhHHHHHHH
Q 000284 520 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLAD----KVNIVVRALSGGMKRKLSL 595 (1723)
Q Consensus 520 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~----~~~~~~~~LSgGqkqrl~l 595 (1723)
.....++.+||+||++.++ .+|+.||+.+.....+.. .+.++++.++++.+++.+ ..++++++||||||||++|
T Consensus 83 ~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrv~l 160 (261)
T PRK14263 83 DPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNRYK-GDLGDRVKHALQGAALWDEVKDKLKVSGLSLSGGQQQRLCI 160 (261)
T ss_pred chHhhhhceEEEecCCccc-cccHHHHHHHHHhhcCch-HHHHHHHHHHHHHcCCchhhhhhhhCCcccCCHHHHHHHHH
Confidence 2335678899999999888 589999998876554432 344568899999999854 3467789999999999999
Q ss_pred HHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEe--------CCEEEEecCH
Q 000284 596 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMA--------NGSLKCCGSS 667 (1723)
Q Consensus 596 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~--------~G~l~~~Gs~ 667 (1723)
||||+.+|+++||||||+|||+.++++++++|+++++++|||++||+++++..+||||++|+ +|++++.|++
T Consensus 161 aral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 161 ARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEMGPT 240 (261)
T ss_pred HHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEeCCH
Confidence 99999999999999999999999999999999999778999999999999999999999996 8999999998
Q ss_pred HHHHh
Q 000284 668 LFLKH 672 (1723)
Q Consensus 668 ~~Lk~ 672 (1723)
.++.+
T Consensus 241 ~~~~~ 245 (261)
T PRK14263 241 AQIFQ 245 (261)
T ss_pred HHHHh
Confidence 77743
No 426
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.2e-39 Score=376.22 Aligned_cols=219 Identities=24% Similarity=0.418 Sum_probs=183.3
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhcc
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAARR 1433 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~~~ 1433 (1723)
++++|+++.|+++ .+.+++|+||++++||++||+|+||||||||+++|+|+++|++|+|.++|.++.. .....++
T Consensus 1 i~~~~l~~~~~~~----~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (237)
T cd03252 1 ITFEHVRFRYKPD----GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRR 76 (237)
T ss_pred CEEEEEEEecCCC----CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhh
Confidence 4689999999632 2469999999999999999999999999999999999999999999999998754 3445677
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHH-----HHHHHHHHc--CCccccCCCCCCCChhHHHHHHHHHHH
Q 000284 1434 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDD-----VVMEKLVEF--DLLKHAKKPSFTLSGGNKRKLSVAIAM 1506 (1723)
Q Consensus 1434 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~kqrl~iA~al 1506 (1723)
.+||+||++.+++ .|++||+.+... +.......+ ...++++.+ ++....++++.+|||||||||+|||||
T Consensus 77 ~i~~~~q~~~~~~-~tv~~nl~~~~~--~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral 153 (237)
T cd03252 77 QVGVVLQENVLFN-RSIRDNIALADP--GMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARAL 153 (237)
T ss_pred cEEEEcCCchhcc-chHHHHhhccCC--CCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHH
Confidence 8999999988775 699999976421 222211111 122344444 555567889999999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhc
Q 000284 1507 IGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRF 1584 (1723)
Q Consensus 1507 ~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~~ 1584 (1723)
+.+|++|||||||+|||+.+++.+++.|++++ + | +|||++||++++++ .|||+++|++|+++..|+++++.++.
T Consensus 154 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~-~-~tiii~sH~~~~~~-~~d~v~~l~~G~i~~~~~~~~~~~~~ 227 (237)
T cd03252 154 IHNPRILIFDEATSALDYESEHAIMRNMHDIC-A-G-RTVIIIAHRLSTVK-NADRIIVMEKGRIVEQGSHDELLAEN 227 (237)
T ss_pred hhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc-C-C-CEEEEEeCCHHHHH-hCCEEEEEECCEEEEEcCHHHHHhcc
Confidence 99999999999999999999999999999984 3 4 58999999999996 59999999999999999999887653
No 427
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=3.1e-39 Score=376.25 Aligned_cols=216 Identities=26% Similarity=0.399 Sum_probs=190.3
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCC----CcceEEEccccCCccHHHH
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP----TTGDALVFGKNITADMDEI 524 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p----~~G~i~i~g~~i~~~~~~~ 524 (1723)
.++++||+|.| + +.+++|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.. ....
T Consensus 4 ~l~~~~l~~~~-~----~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~-~~~~ 77 (254)
T PRK10418 4 QIELRNIALQA-A----QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAP-CALR 77 (254)
T ss_pred EEEEeCeEEEe-c----cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccc-cccc
Confidence 68999999999 2 2599999999999999999999999999999999999999 99999999998852 2223
Q ss_pred hcceEEEccCCC--CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCc---ccccccCCCChhHHHHHHHHHHH
Q 000284 525 RKGLGVCPQYDI--LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLAD---KVNIVVRALSGGMKRKLSLGIAL 599 (1723)
Q Consensus 525 r~~ig~~~Q~~~--l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~---~~~~~~~~LSgGqkqrl~lA~al 599 (1723)
++.+||+||++. +.+.+|+.+++.......+... .++++.++++.++|.+ ..++.+.+||||||||++|||||
T Consensus 78 ~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~l~~~~~~~~~~~~~LS~Gq~qrv~laral 155 (254)
T PRK10418 78 GRKIATIMQNPRSAFNPLHTMHTHARETCLALGKPA--DDATLTAALEAVGLENAARVLKLYPFEMSGGMLQRMMIALAL 155 (254)
T ss_pred cceEEEEecCCccccCccccHHHHHHHHHHHcCCCh--HHHHHHHHHHHcCCCChhhhhhcCCcccCHHHHHHHHHHHHH
Confidence 467999999974 4566899999877655445433 2367899999999987 46899999999999999999999
Q ss_pred hcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 600 IGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 600 ~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
+.+|++|||||||+|||+.+++.++++|+++. + |+|||++||+++++..+|||+++|++|+++..|++.++.+
T Consensus 156 ~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 230 (254)
T PRK10418 156 LCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLFN 230 (254)
T ss_pred hcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHhh
Confidence 99999999999999999999999999999984 3 8999999999999999999999999999999999877753
No 428
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=2.1e-39 Score=370.75 Aligned_cols=213 Identities=26% Similarity=0.375 Sum_probs=183.7
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHh
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAA 1431 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~ 1431 (1723)
++|+++||+|.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .....
T Consensus 6 ~~i~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~ 79 (225)
T PRK10247 6 PLLQLQNVGYLAGD------AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIY 79 (225)
T ss_pred ceEEEeccEEeeCC------ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHH
Confidence 47999999999953 459999999999999999999999999999999999999999999999998864 34456
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000284 1432 RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIAMIGDP 1510 (1723)
Q Consensus 1432 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG~kqrl~iA~al~~~p 1510 (1723)
++.+||+||++.+++ .|++||+.+....++... .++++.++++.+++. ...++++.+|||||||||+|||||+.+|
T Consensus 80 ~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~~~--~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~~~p 156 (225)
T PRK10247 80 RQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQQP--DPAIFLDDLERFALPDTILTKNIAELSGGEKQRISLIRNLQFMP 156 (225)
T ss_pred HhccEEEeccccccc-ccHHHHHHhHHhhcCCCh--HHHHHHHHHHHcCCChHHhcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 778999999998887 599999987554443221 234567899999996 5689999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEE-CCEEEEecC
Q 000284 1511 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMV-GGQLRCIGS 1576 (1723)
Q Consensus 1511 ~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~-~G~l~~~g~ 1576 (1723)
+++||||||+|||+.+++.+.+.|++++++.| +|||++||++++++ .|||+++|+ ++..+.+|+
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tvii~sh~~~~~~-~~d~i~~l~~~~~~~~~~~ 221 (225)
T PRK10247 157 KVLLLDEITSALDESNKHNVNEIIHRYVREQN-IAVLWVTHDKDEIN-HADKVITLQPHAGEMQEAR 221 (225)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEECChHHHH-hCCEEEEEecccchHhhhh
Confidence 99999999999999999999999999865444 58999999999997 599999995 455555554
No 429
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-39 Score=374.09 Aligned_cols=220 Identities=25% Similarity=0.430 Sum_probs=186.4
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhcc
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAARR 1433 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~~~ 1433 (1723)
|+++|+++.|++. ++.+++++||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .....++
T Consensus 1 i~~~~l~~~~~~~----~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 76 (234)
T cd03251 1 VEFKNVTFRYPGD----GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRR 76 (234)
T ss_pred CEEEEEEEEeCCC----CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHh
Confidence 4689999999642 2358999999999999999999999999999999999999999999999998754 3445677
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHH-----HHHHHHHHc--CCccccCCCCCCCChhHHHHHHHHHHH
Q 000284 1434 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDD-----VVMEKLVEF--DLLKHAKKPSFTLSGGNKRKLSVAIAM 1506 (1723)
Q Consensus 1434 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~kqrl~iA~al 1506 (1723)
.+||+||++.+++ .|++||+.+.... .......+ .+.+.++.+ ++....++++.+||||||||++||+||
T Consensus 77 ~i~~~~q~~~~~~-~tv~enl~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al 153 (234)
T cd03251 77 QIGLVSQDVFLFN-DTVAENIAYGRPG--ATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARAL 153 (234)
T ss_pred hEEEeCCCCeecc-ccHHHHhhccCCC--CCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHH
Confidence 8999999998886 6999999765321 11111111 234455555 677778889999999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhcC
Q 000284 1507 IGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFG 1585 (1723)
Q Consensus 1507 ~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~~~ 1585 (1723)
+.+|++|||||||+|||+.+++.+++.|++++ + + .|||++||++++++. |||+++|++|++++.|+++++..+++
T Consensus 154 ~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~-~-~-~tii~~sh~~~~~~~-~d~v~~l~~G~i~~~~~~~~~~~~~~ 228 (234)
T cd03251 154 LKDPPILILDEATSALDTESERLVQAALERLM-K-N-RTTFVIAHRLSTIEN-ADRIVVLEDGKIVERGTHEELLAQGG 228 (234)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-C-C-CEEEEEecCHHHHhh-CCEEEEecCCeEeeeCCHHHHHHcCc
Confidence 99999999999999999999999999999984 3 4 589999999999986 99999999999999999999876654
No 430
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-39 Score=373.18 Aligned_cols=220 Identities=24% Similarity=0.393 Sum_probs=185.2
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhcc
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 527 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 527 (1723)
.++++|+++.|++ .+.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +....|+.
T Consensus 2 ~l~~~~l~~~~~~---~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (229)
T cd03254 2 EIEFENVNFSYDE---KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSM 78 (229)
T ss_pred eEEEEEEEEecCC---CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhh
Confidence 3789999999953 2359999999999999999999999999999999999999999999999988753 34556788
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCCcccccccCCCChhHHHHHHHHHHHh
Q 000284 528 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLES-----VVAEMVDEV--GLADKVNIVVRALSGGMKRKLSLGIALI 600 (1723)
Q Consensus 528 ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~-----~v~~~l~~~--~l~~~~~~~~~~LSgGqkqrl~lA~al~ 600 (1723)
+||+||++.+++. |+.||+.++.... ......+ .+++.++.+ ++....++.+.+||||||||++||+||+
T Consensus 79 i~~~~q~~~~~~~-tv~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~ 155 (229)
T cd03254 79 IGVVLQDTFLFSG-TIMENIRLGRPNA--TDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAML 155 (229)
T ss_pred EEEecCCchhhhh-HHHHHHhccCCCC--CHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHh
Confidence 9999999988876 9999998753211 1111111 123334443 5555567778999999999999999999
Q ss_pred cCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhhhC
Q 000284 601 GDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYG 675 (1723)
Q Consensus 601 ~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~g 675 (1723)
.+|+++||||||+|||+.+++.+++.|+++++++|||++||+++++.. |||+++|++|++...|+..++..++|
T Consensus 156 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~-~d~i~~l~~g~~~~~~~~~~~~~~~~ 229 (229)
T cd03254 156 RDPKILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKN-ADKILVLDDGKIIEEGTHDELLAKKG 229 (229)
T ss_pred cCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhh-CCEEEEEeCCeEEEeCCHHHHHhhCC
Confidence 999999999999999999999999999998778999999999999975 99999999999999999877766543
No 431
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=2.8e-38 Score=415.34 Aligned_cols=128 Identities=28% Similarity=0.468 Sum_probs=112.5
Q ss_pred CCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCcc-ccCCCCCCCChhHHHHHHHHHHHhcCC---CEEEEeCCCCCC
Q 000284 1447 YLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLK-HAKKPSFTLSGGNKRKLSVAIAMIGDP---PIVILDEPSTGM 1522 (1723)
Q Consensus 1447 ~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG~kqrl~iA~al~~~p---~vllLDEPT~gL 1522 (1723)
.||+.|++.++..++++ ....+.|+.+||.. ..++++.+||||||||+.||++|+.+| +++||||||+||
T Consensus 791 ~ltv~E~l~~f~~~~~i------~~~l~~L~~vgL~~l~l~~~~~tLSgGEkQRl~LAraL~~~p~~~~llILDEPtsGL 864 (943)
T PRK00349 791 DMTVEEALEFFEAIPKI------ARKLQTLVDVGLGYIKLGQPATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGL 864 (943)
T ss_pred cCcHHHHHHHHHhchhh------hHHHHHHHHCCCCcccccCCcccCCHHHHHHHHHHHHHhcCCCCCeEEEEECCCCCC
Confidence 37999999998765432 23357899999975 579999999999999999999999999 999999999999
Q ss_pred CHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEE------ECCEEEEecChhHHHhh
Q 000284 1523 DPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIM------VGGQLRCIGSPQHLKTR 1583 (1723)
Q Consensus 1523 D~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im------~~G~l~~~g~~~~l~~~ 1583 (1723)
|+..++.+++.|+++. ++| .|||++||++++++ .||+|++| .+|++++.|+++++...
T Consensus 865 D~~~~~~L~~~L~~l~-~~G-~TVIiitH~~~~i~-~aD~ii~Lgp~~G~~~G~Iv~~Gt~~el~~~ 928 (943)
T PRK00349 865 HFEDIRKLLEVLHRLV-DKG-NTVVVIEHNLDVIK-TADWIIDLGPEGGDGGGEIVATGTPEEVAKV 928 (943)
T ss_pred CHHHHHHHHHHHHHHH-hCC-CEEEEEecCHHHHH-hCCEEEEecCCcCCCCCEEEEeCCHHHHHhC
Confidence 9999999999999986 445 58999999999986 69999999 79999999999998753
No 432
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-39 Score=383.89 Aligned_cols=224 Identities=25% Similarity=0.437 Sum_probs=193.3
Q ss_pred CcceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeCC
Q 000284 1351 DNAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDIR 1425 (1723)
Q Consensus 1351 ~~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~-----p~~G~i~i~G~~i~ 1425 (1723)
...+|+++|++++|.+ +.+.+|+|+||+|++||++||+|+||||||||+++|+|+.+ |++|+|.++|.++.
T Consensus 77 ~~~~i~~~nls~~y~~----~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~ 152 (329)
T PRK14257 77 HANVFEIRNFNFWYMN----RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTR 152 (329)
T ss_pred cCceEEEEeeEEEecC----CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcc
Confidence 3458999999999963 23469999999999999999999999999999999999986 57999999999986
Q ss_pred C---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhh-HHHHHHHHHHHcCCc----cccCCCCCCCChhHH
Q 000284 1426 S---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYR-MDDVVMEKLVEFDLL----KHAKKPSFTLSGGNK 1497 (1723)
Q Consensus 1426 ~---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~-~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~k 1497 (1723)
. ....+|+++|||||++.++. .|++||+.+.....+....+ .++.+.+.++.++|. ...++++.+||||||
T Consensus 153 ~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~~~~LSgGqk 231 (329)
T PRK14257 153 SKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVKDDLDKAGNALSGGQQ 231 (329)
T ss_pred ccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhhhhhhCCcccCCHHHH
Confidence 3 22456788999999998885 79999998755444443322 234467788888773 356889999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecCh
Q 000284 1498 RKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSP 1577 (1723)
Q Consensus 1498 qrl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~ 1577 (1723)
|||+|||||+.+|+||||||||+|||+.+++.+++.|+++. + + +|||++||+++++..+||||++|++|++++.|++
T Consensus 232 qRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~-~-~-~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~ 308 (329)
T PRK14257 232 QRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELK-K-K-YSIIIVTHSMAQAQRISDETVFFYQGWIEEAGET 308 (329)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-c-C-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999999999985 3 3 6899999999999999999999999999999999
Q ss_pred hHHHh
Q 000284 1578 QHLKT 1582 (1723)
Q Consensus 1578 ~~l~~ 1582 (1723)
+++.+
T Consensus 309 ~~l~~ 313 (329)
T PRK14257 309 KTIFI 313 (329)
T ss_pred HHHhc
Confidence 99864
No 433
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-39 Score=414.07 Aligned_cols=220 Identities=25% Similarity=0.369 Sum_probs=195.1
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC--CceEEEEcCeeCCCCh-H
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP--TDGTAFIFGKDIRSDP-K 1429 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p--~~G~i~i~G~~i~~~~-~ 1429 (1723)
++|+++|++|+|++ +.+++|+||+|++||++||+||||||||||+|+|+|+++| ++|+|.++|.++.... .
T Consensus 4 ~~l~~~nl~~~~~~------~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~ 77 (506)
T PRK13549 4 YLLEMKNITKTFGG------VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIR 77 (506)
T ss_pred ceEEEeeeEEEeCC------eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHH
Confidence 47999999999953 4699999999999999999999999999999999999996 8999999999986532 2
Q ss_pred -HhccceEEEecCCCCCCCCCHHHHHHHHHHHc--C-CChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHH
Q 000284 1430 -AARRLIGYCPQFDALLEYLTVQEHLELYARIK--G-VAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIA 1505 (1723)
Q Consensus 1430 -~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~--g-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~a 1505 (1723)
..++.+||+||++.+++.+|++||+.+....+ + .+..+..+++.++++.+++.+..++++++|||||||||+||+|
T Consensus 78 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~a 157 (506)
T PRK13549 78 DTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPVGNLGLGQQQLVEIAKA 157 (506)
T ss_pred HHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccchhhCCHHHHHHHHHHHH
Confidence 34577999999998999999999998765432 2 2333445678899999999888999999999999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000284 1506 MIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1580 (1723)
Q Consensus 1506 l~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l 1580 (1723)
|+.+|++|||||||+|||+.+++.+++.|++++ ++| +|||++|||++++..+||||++|++|+++..|+++++
T Consensus 158 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~-~~~-~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 230 (506)
T PRK13549 158 LNKQARLLILDEPTASLTESETAVLLDIIRDLK-AHG-IACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGM 230 (506)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHH-HCC-CEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccC
Confidence 999999999999999999999999999999986 444 5899999999999999999999999999999988765
No 434
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-39 Score=414.50 Aligned_cols=220 Identities=27% Similarity=0.399 Sum_probs=194.3
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-hH-H
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-PK-A 1430 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-~~-~ 1430 (1723)
++|+++|++|+|++ +.+++|+||+|++||++||+||||||||||+|+|+|+++|++|+|.++|+++... .. .
T Consensus 4 ~~l~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~ 77 (510)
T PRK09700 4 PYISMAGIGKSFGP------VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLA 77 (510)
T ss_pred ceEEEeeeEEEcCC------eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHH
Confidence 47999999999953 4699999999999999999999999999999999999999999999999998653 22 2
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHH----HcCC---ChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHH
Q 000284 1431 ARRLIGYCPQFDALLEYLTVQEHLELYAR----IKGV---AEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVA 1503 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~----~~g~---~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA 1503 (1723)
.++++||+||++.+++.+||+||+.+... ..+. +..+.++++.++++.+++.+..++++++|||||||||+||
T Consensus 78 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qrv~ia 157 (510)
T PRK09700 78 AQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKVANLSISHKQMLEIA 157 (510)
T ss_pred HHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccchhhCCHHHHHHHHHH
Confidence 34679999999989999999999976431 1222 2234456788899999999889999999999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000284 1504 IAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1580 (1723)
Q Consensus 1504 ~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l 1580 (1723)
+||+.+|++|||||||+|||+.+++.+++.|+++++ +| +|||++|||++++..+|||+++|++|++++.|+++++
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~g-~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 232 (510)
T PRK09700 158 KTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRK-EG-TAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDV 232 (510)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CC-CEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhC
Confidence 999999999999999999999999999999999964 44 5899999999999999999999999999999988765
No 435
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-40 Score=339.28 Aligned_cols=222 Identities=23% Similarity=0.396 Sum_probs=202.7
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-----
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD----- 1427 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~----- 1427 (1723)
..|+++||.|+|| ...+|++||++-++|+++.|+|.+||||||++|||.=+.+|+.|.|.++|+.++..
T Consensus 5 ~~l~v~dlHK~~G------~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G 78 (256)
T COG4598 5 NALEVEDLHKRYG------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDG 78 (256)
T ss_pred cceehhHHHhhcc------cchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCC
Confidence 4689999999996 46799999999999999999999999999999999999999999999999987321
Q ss_pred ---------hHHhccceEEEecCCCCCCCCCHHHHHHH-HHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHH
Q 000284 1428 ---------PKAARRLIGYCPQFDALLEYLTVQEHLEL-YARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNK 1497 (1723)
Q Consensus 1428 ---------~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~-~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~k 1497 (1723)
...+|.++|+|+|+..||..|||.||+.- ....-|.++.+..++++.+|.++|+.+..+.++..||||||
T Consensus 79 ~l~~ad~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~Ae~~L~kVGi~ek~~~YP~~LSGGQQ 158 (256)
T COG4598 79 QLKPADKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAIERAEKYLAKVGIAEKADAYPAHLSGGQQ 158 (256)
T ss_pred CeeeCCHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHHHHHHHHHHHhCchhhhhcCccccCchHH
Confidence 12467789999999999999999999754 23445888888889999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecCh
Q 000284 1498 RKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSP 1577 (1723)
Q Consensus 1498 qrl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~ 1577 (1723)
||++|||||+.+|+++++|||||+|||+-.-++.+.+++++ ++| +|.+++||.|.++..++++|+.+++|++-+.|+|
T Consensus 159 QR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LA-eEg-rTMv~VTHEM~FAR~Vss~v~fLh~G~iEE~G~P 236 (256)
T COG4598 159 QRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLA-EEG-RTMVVVTHEMGFARDVSSHVIFLHQGKIEEEGPP 236 (256)
T ss_pred HHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHH-HhC-CeEEEEeeehhHHHhhhhheEEeecceecccCCh
Confidence 99999999999999999999999999999999999999997 455 5899999999999999999999999999999999
Q ss_pred hHHHh
Q 000284 1578 QHLKT 1582 (1723)
Q Consensus 1578 ~~l~~ 1582 (1723)
+++..
T Consensus 237 ~qvf~ 241 (256)
T COG4598 237 EQVFG 241 (256)
T ss_pred HHHhc
Confidence 99753
No 436
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-39 Score=374.18 Aligned_cols=218 Identities=24% Similarity=0.436 Sum_probs=188.8
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeCCC---
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDIRS--- 1426 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~-----p~~G~i~i~G~~i~~--- 1426 (1723)
-+++|+++.|++ +.+++|+||+|++||++||+|+||||||||+++|+|+.+ |++|+|.++|+++..
T Consensus 6 ~~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~ 79 (251)
T PRK14244 6 ASVKNLNLWYGS------KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDT 79 (251)
T ss_pred EEeeeEEEEECC------eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhccc
Confidence 368999999952 469999999999999999999999999999999999986 479999999998753
Q ss_pred ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCC--hhhHHHHHHHHHHHcCCcc----ccCCCCCCCChhHHHHH
Q 000284 1427 DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVA--EYRMDDVVMEKLVEFDLLK----HAKKPSFTLSGGNKRKL 1500 (1723)
Q Consensus 1427 ~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~--~~~~~~~~~~~l~~~~l~~----~~~~~~~~LSgG~kqrl 1500 (1723)
.....++++||+||++.+++. |++||+.+....++.. ....++.+.++++.+++.+ ..++++.+||||||||+
T Consensus 80 ~~~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv 158 (251)
T PRK14244 80 NVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELGDRLKDSAFELSGGQQQRL 158 (251)
T ss_pred chHHHhhhEEEEecCcccccC-CHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhhhHhhcChhhCCHHHHHHH
Confidence 123457789999999988875 9999998764444432 2334456778899999964 46788999999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000284 1501 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1580 (1723)
Q Consensus 1501 ~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l 1580 (1723)
+|||||+.+|++|||||||+|||+.+++.+++.|+++. + + +|||++||+++++..+|||+++|++|++++.|+++++
T Consensus 159 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 159 CIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK-K-N-FTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c-C-CeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999984 3 4 5899999999999999999999999999999999887
Q ss_pred Hh
Q 000284 1581 KT 1582 (1723)
Q Consensus 1581 ~~ 1582 (1723)
.+
T Consensus 236 ~~ 237 (251)
T PRK14244 236 FK 237 (251)
T ss_pred hc
Confidence 54
No 437
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=2.2e-39 Score=365.86 Aligned_cols=201 Identities=28% Similarity=0.484 Sum_probs=177.6
Q ss_pred EEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-----hHHh
Q 000284 1357 LRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-----PKAA 1431 (1723)
Q Consensus 1357 v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-----~~~~ 1431 (1723)
++|++|.|++ +.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++... ....
T Consensus 1 i~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 74 (206)
T TIGR03608 1 LKNISKKFGD------KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFR 74 (206)
T ss_pred CcceEEEECC------EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHH
Confidence 4689999953 4699999999999999999999999999999999999999999999999986421 1235
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000284 1432 RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1511 (1723)
Q Consensus 1432 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~ 1511 (1723)
++.+||++|++.+++.+|++||+.+.....+....+..+++.++++.+++.+..++++.+||||||||++||+||+.+|+
T Consensus 75 ~~~i~~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qr~~laral~~~p~ 154 (206)
T TIGR03608 75 REKLGYLFQNFALIENETVEENLDLGLKYKKLSKKEKREKKKEALEKVGLNLKLKQKIYELSGGEQQRVALARAILKDPP 154 (206)
T ss_pred HhCeeEEecchhhccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCchhhhcCChhhCCHHHHHHHHHHHHHHcCCC
Confidence 67899999999999889999999986655555555556678899999999988999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEE
Q 000284 1512 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIM 1566 (1723)
Q Consensus 1512 vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im 1566 (1723)
+|||||||+|||+.+++.+++.|+++++ +| .|||++||++++++ +|||+++|
T Consensus 155 llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~sh~~~~~~-~~d~i~~l 206 (206)
T TIGR03608 155 LILADEPTGSLDPKNRDEVLDLLLELND-EG-KTIIIVTHDPEVAK-QADRVIEL 206 (206)
T ss_pred EEEEeCCcCCCCHHHHHHHHHHHHHHHh-cC-CEEEEEeCCHHHHh-hcCEEEeC
Confidence 9999999999999999999999999863 44 58999999999775 79999875
No 438
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-39 Score=376.46 Aligned_cols=219 Identities=25% Similarity=0.421 Sum_probs=189.5
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeCCC-
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDIRS- 1426 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~-----p~~G~i~i~G~~i~~- 1426 (1723)
++|+++|++|+|++ +.+++|+||+|++||++||+|+||||||||+++|+|+++ |++|+|+++|+++..
T Consensus 9 ~~l~i~~v~~~~~~------~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~ 82 (264)
T PRK14243 9 TVLRTENLNVYYGS------FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAP 82 (264)
T ss_pred eEEEEeeeEEEECC------EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEcccc
Confidence 47999999999953 469999999999999999999999999999999999986 489999999998742
Q ss_pred --ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHHH
Q 000284 1427 --DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRKL 1500 (1723)
Q Consensus 1427 --~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~kqrl 1500 (1723)
.....++++||++|++.+++ .|+.||+.+.....+.. ...++++.++++.+++. +..++++.+||||||||+
T Consensus 83 ~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv 160 (264)
T PRK14243 83 DVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARINGYK-GDMDELVERSLRQAALWDEVKDKLKQSGLSLSGGQQQRL 160 (264)
T ss_pred ccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcCcc-hHHHHHHHHHHHHhCchhhHHHHhcCCcccCCHHHHHHH
Confidence 33456778999999998887 59999998765444432 22344566777887774 356889999999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEE---------CCEE
Q 000284 1501 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMV---------GGQL 1571 (1723)
Q Consensus 1501 ~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~---------~G~l 1571 (1723)
+|||||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+||||++|+ +|++
T Consensus 161 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~-~-~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i 237 (264)
T PRK14243 161 CIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELK-E-Q-YTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYL 237 (264)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c-C-CEEEEEecCHHHHHHhCCEEEEEecccccccccCceE
Confidence 99999999999999999999999999999999999985 3 3 589999999999999999999998 8999
Q ss_pred EEecChhHHHh
Q 000284 1572 RCIGSPQHLKT 1582 (1723)
Q Consensus 1572 ~~~g~~~~l~~ 1582 (1723)
++.|+++++.+
T Consensus 238 ~~~~~~~~~~~ 248 (264)
T PRK14243 238 VEFDRTEKIFN 248 (264)
T ss_pred EEeCCHHHHHh
Confidence 99999999864
No 439
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-39 Score=372.78 Aligned_cols=220 Identities=23% Similarity=0.411 Sum_probs=190.2
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC--C---CceEEEEcCeeCCC-
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY--P---TDGTAFIFGKDIRS- 1426 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~--p---~~G~i~i~G~~i~~- 1426 (1723)
.+|+++|++|.|++ +.+++++||+|++||++||+|+||||||||+++|+|+.+ | ++|+|.++|.++..
T Consensus 4 ~~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~ 77 (252)
T PRK14255 4 KIITSSDVHLFYGK------FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAP 77 (252)
T ss_pred ceEEEEeEEEEECC------eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccc
Confidence 57999999999963 469999999999999999999999999999999999975 5 59999999998853
Q ss_pred --ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCCh-hhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHH
Q 000284 1427 --DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAE-YRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRK 1499 (1723)
Q Consensus 1427 --~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~-~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~kqr 1499 (1723)
.....++.+||+||++.+++ .|++||+.+....++... ...++.+.+.++.+++. +..++.+.+||||||||
T Consensus 78 ~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~Gq~qr 156 (252)
T PRK14255 78 NEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVKDHLHESALSLSGGQQQR 156 (252)
T ss_pred cccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchhhHHhcCcccCCHHHHHH
Confidence 23345678999999998887 799999987655555432 22344566778888763 45788999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000284 1500 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1579 (1723)
Q Consensus 1500 l~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~ 1579 (1723)
++|||||+.+|++|||||||+|||+.+++.+.+.|++++ + + .|||++||+++++..+||||++|++|+++..|++.+
T Consensus 157 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 233 (252)
T PRK14255 157 VCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELR-D-Q-YTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQ 233 (252)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHH-h-C-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999999985 3 3 589999999999999999999999999999999888
Q ss_pred HHh
Q 000284 1580 LKT 1582 (1723)
Q Consensus 1580 l~~ 1582 (1723)
+..
T Consensus 234 ~~~ 236 (252)
T PRK14255 234 MFL 236 (252)
T ss_pred Hhc
Confidence 754
No 440
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=3.3e-39 Score=411.66 Aligned_cols=217 Identities=25% Similarity=0.395 Sum_probs=193.6
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-hHH-
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-PKA- 1430 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~-~~~- 1430 (1723)
++|+++|++|+|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++... ...
T Consensus 10 ~~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~ 83 (510)
T PRK15439 10 PLLCARSISKQYSG------VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKA 83 (510)
T ss_pred ceEEEEeEEEEeCC------ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHH
Confidence 47999999999963 4599999999999999999999999999999999999999999999999998652 233
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000284 1431 ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1510 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p 1510 (1723)
.++.+||+||++.+++.+||+||+.+.... ....++++.++++.+++.+..++++++|||||||||+||+||+.+|
T Consensus 84 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~----~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~aL~~~p 159 (510)
T PRK15439 84 HQLGIYLVPQEPLLFPNLSVKENILFGLPK----RQASMQKMKQLLAALGCQLDLDSSAGSLEVADRQIVEILRGLMRDS 159 (510)
T ss_pred HhCCEEEEeccCccCCCCcHHHHhhccccc----chHHHHHHHHHHHHcCCCccccCChhhCCHHHHHHHHHHHHHHcCC
Confidence 235799999999999999999999874321 1234567788999999998899999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000284 1511 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1581 (1723)
Q Consensus 1511 ~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~ 1581 (1723)
++|||||||+|||+.+++.+++.|+++++ +| +|||++|||+++++.+||||++|++|++++.|+++++.
T Consensus 160 ~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g-~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 228 (510)
T PRK15439 160 RILILDEPTASLTPAETERLFSRIRELLA-QG-VGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLS 228 (510)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcC
Confidence 99999999999999999999999999864 44 58999999999999999999999999999999987763
No 441
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=4.8e-39 Score=377.06 Aligned_cols=223 Identities=27% Similarity=0.359 Sum_probs=195.2
Q ss_pred eEEEEeEEEEecCc-----CCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc----
Q 000284 449 CIQIRKLHKVYATK-----RGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA---- 519 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~-----~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~---- 519 (1723)
.|+++||+|.|+.. ..++.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++..
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 58999999999631 013569999999999999999999999999999999999999999999999998753
Q ss_pred cHHHHhcceEEEccCC--CCCCCCCHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHcCCC-cccccccCCCChhHHHHHHH
Q 000284 520 DMDEIRKGLGVCPQYD--ILFPELTVREHLEMFAV-LKGVKEELLESVVAEMVDEVGLA-DKVNIVVRALSGGMKRKLSL 595 (1723)
Q Consensus 520 ~~~~~r~~ig~~~Q~~--~l~~~lTv~e~l~~~~~-~~g~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~LSgGqkqrl~l 595 (1723)
.....++.+||+||++ .+++..|+.|++.+... ..+....+..++++++++.+|+. ...++.+.+||||||||++|
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~Ge~qrl~l 162 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDDSVLDKRPPQLSGGQLQRVCL 162 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCChhHhhCCCccCChHHHHHHHH
Confidence 1234678899999997 46778999999876543 23444555566889999999997 57899999999999999999
Q ss_pred HHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 596 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 596 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
||||+.+|++|||||||+|||+.+++.+.++|++++ + ++|||++||+++++..+|||+++|++|+++..|++.++.
T Consensus 163 aral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~ 240 (268)
T PRK10419 163 ARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPVGDKL 240 (268)
T ss_pred HHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCChhhcc
Confidence 999999999999999999999999999999999985 3 899999999999999999999999999999999987764
No 442
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-39 Score=373.26 Aligned_cols=220 Identities=26% Similarity=0.416 Sum_probs=194.9
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCC-----CCcceEEEccccCCc---c
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA---D 520 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~---~ 520 (1723)
.++++||++.|++ +.+++|+||++.+||+++|+|+||||||||+++|+|+.+ |++|+|.++|.++.. +
T Consensus 3 ~l~~~~v~~~~~~----~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 78 (250)
T PRK14266 3 RIEVENLNTYFDD----AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVD 78 (250)
T ss_pred EEEEEeEEEEeCC----eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEccccccc
Confidence 4889999999953 469999999999999999999999999999999999864 489999999998753 3
Q ss_pred HHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHHH
Q 000284 521 MDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLSL 595 (1723)
Q Consensus 521 ~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~v~~~l~~~~l~----~~~~~~~~~LSgGqkqrl~l 595 (1723)
....++++|||||++.+|+. |+.||+.+.....+. +.+..++++.++++.+|+. +..++++.+||||||||++|
T Consensus 79 ~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qrv~l 157 (250)
T PRK14266 79 VVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDKLDKSALGLSGGQQQRLCI 157 (250)
T ss_pred HHHHhhheEEEecCCccCcc-hHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHHHhCCcccCCHHHHHHHHH
Confidence 44667899999999999985 999999876544443 3345667889999999984 34688899999999999999
Q ss_pred HHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000284 596 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 673 (1723)
Q Consensus 596 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~ 673 (1723)
||||+.+|+++||||||+|||+.+++.+.++|+++++++|||++||+++++..+|||+++|++|++.+.|++.++...
T Consensus 158 aral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~~~~ 235 (250)
T PRK14266 158 ARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQIFIN 235 (250)
T ss_pred HHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHHHhC
Confidence 999999999999999999999999999999999998789999999999999999999999999999999998887543
No 443
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=6e-39 Score=373.93 Aligned_cols=221 Identities=23% Similarity=0.395 Sum_probs=189.9
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcccc-----CCc-cH
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKN-----ITA-DM 521 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~-----i~~-~~ 521 (1723)
+.|+++||++.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+ +.. ..
T Consensus 2 ~~l~~~~l~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 77 (253)
T TIGR02323 2 PLLQVSGLSKSYGG----GKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSE 77 (253)
T ss_pred ceEEEeeeEEEeCC----ceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCH
Confidence 36899999999953 358999999999999999999999999999999999999999999999976 532 22
Q ss_pred H----HHhcceEEEccCCC--CCCCCCHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHcCCC-cccccccCCCChhHHHHH
Q 000284 522 D----EIRKGLGVCPQYDI--LFPELTVREHLEMFAVLKG-VKEELLESVVAEMVDEVGLA-DKVNIVVRALSGGMKRKL 593 (1723)
Q Consensus 522 ~----~~r~~ig~~~Q~~~--l~~~lTv~e~l~~~~~~~g-~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~LSgGqkqrl 593 (1723)
. ..++.+||++|++. +++.+|+.||+.......+ ......++++.++++.+|+. +..++.+.+||||||||+
T Consensus 78 ~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~LSgG~~qrv 157 (253)
T TIGR02323 78 AERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDPTRIDDLPRAFSGGMQQRL 157 (253)
T ss_pred HHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCChhhhhcCchhcCHHHHHHH
Confidence 2 23467999999974 4566799999875432111 12223457788999999997 478999999999999999
Q ss_pred HHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 594 SLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 594 ~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
+|||||+.+|++|||||||+|||+.+++.++++|+++. + |.|||++||+++++..+|||+++|++|+++..|++.++.
T Consensus 158 ~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~~~~~~~~ 237 (253)
T TIGR02323 158 QIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVESGLTDQVL 237 (253)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEECCHHHHh
Confidence 99999999999999999999999999999999999874 3 899999999999999999999999999999999987765
Q ss_pred h
Q 000284 672 H 672 (1723)
Q Consensus 672 ~ 672 (1723)
.
T Consensus 238 ~ 238 (253)
T TIGR02323 238 D 238 (253)
T ss_pred c
Confidence 3
No 444
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.7e-39 Score=375.02 Aligned_cols=220 Identities=27% Similarity=0.431 Sum_probs=185.2
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhcce
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKGL 528 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~i 528 (1723)
++++|+++.|++. +++.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. .....++.+
T Consensus 1 l~i~~l~~~~~~~-~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (238)
T cd03249 1 IEFKNVSFRYPSR-PDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQI 79 (238)
T ss_pred CeEEEEEEecCCC-CCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhE
Confidence 4689999999642 12469999999999999999999999999999999999999999999999988753 334556789
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCCcccccccCCCChhHHHHHHHHHHHhc
Q 000284 529 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLES-----VVAEMVDEV--GLADKVNIVVRALSGGMKRKLSLGIALIG 601 (1723)
Q Consensus 529 g~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~-----~v~~~l~~~--~l~~~~~~~~~~LSgGqkqrl~lA~al~~ 601 (1723)
||+||++.+++ .||+||+.+....+ ..++..+ .+.+.++.+ ++....++.+.+||||||||++||+||+.
T Consensus 80 ~~~~q~~~~~~-~tv~e~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~ 156 (238)
T cd03249 80 GLVSQEPVLFD-GTIAENIRYGKPDA--TDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLR 156 (238)
T ss_pred EEECCchhhhh-hhHHHHhhccCCCC--CHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhc
Confidence 99999998886 69999998753221 1122111 123334444 56666788889999999999999999999
Q ss_pred CCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhhh
Q 000284 602 DSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQY 674 (1723)
Q Consensus 602 ~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~ 674 (1723)
+|+++||||||+|||+.+++.+++.|+++++|+|||++||++++++ +|||+++|++|+++..|+..++....
T Consensus 157 ~p~llllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~-~~d~v~~l~~G~i~~~~~~~~~~~~~ 228 (238)
T cd03249 157 NPKILLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIR-NADLIAVLQNGQVVEQGTHDELMAQK 228 (238)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHh-hCCEEEEEECCEEEEeCCHHHHhhcC
Confidence 9999999999999999999999999999877899999999999997 79999999999999999987776544
No 445
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.2e-39 Score=363.75 Aligned_cols=202 Identities=28% Similarity=0.392 Sum_probs=180.4
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1433 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~ 1433 (1723)
+++++|++|.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.......++
T Consensus 1 ~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~~~~~~ 74 (204)
T PRK13538 1 MLEARNLACERDE------RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQRDEYHQ 74 (204)
T ss_pred CeEEEEEEEEECC------EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccchHHhhh
Confidence 4789999999953 4699999999999999999999999999999999999999999999999998654455677
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000284 1434 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1513 (1723)
Q Consensus 1434 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vl 1513 (1723)
+++|++|++.+++.+|+.||+.+....++. ..+++++++++.+++.+..++++.+||||||||++||+||+.+|++|
T Consensus 75 ~~~~~~~~~~~~~~~tv~e~l~~~~~~~~~---~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~la~al~~~p~ll 151 (204)
T PRK13538 75 DLLYLGHQPGIKTELTALENLRFYQRLHGP---GDDEALWEALAQVGLAGFEDVPVRQLSAGQQRRVALARLWLTRAPLW 151 (204)
T ss_pred heEEeCCccccCcCCcHHHHHHHHHHhcCc---cHHHHHHHHHHHcCCHHHhhCChhhcCHHHHHHHHHHHHHhcCCCEE
Confidence 899999999899999999999887655442 23456788999999988889999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEE
Q 000284 1514 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIM 1566 (1723)
Q Consensus 1514 lLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im 1566 (1723)
||||||+|||+.+++.+++.|++++ ++| +|||++||+++++++..+|++.+
T Consensus 152 llDEPt~~LD~~~~~~l~~~l~~~~-~~~-~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 152 ILDEPFTAIDKQGVARLEALLAQHA-EQG-GMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHH-HCC-CEEEEEecChhhhccCCceEEec
Confidence 9999999999999999999999985 344 58999999999999977777665
No 446
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.2e-39 Score=332.86 Aligned_cols=214 Identities=25% Similarity=0.417 Sum_probs=199.0
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc----cHHHH
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA----DMDEI 524 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~----~~~~~ 524 (1723)
.|++++++|.-+...+...+|++++|.|++||-++|+||+|||||||+-+|+|+..|++|+|.+.|++..+ .....
T Consensus 6 ii~~~~l~ktvg~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA~~ 85 (228)
T COG4181 6 IIEVHHLSKTVGQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARAAL 85 (228)
T ss_pred eeehhhhhhhhcCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHHHh
Confidence 68999999999887788899999999999999999999999999999999999999999999999999854 22344
Q ss_pred h-cceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCC
Q 000284 525 R-KGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDS 603 (1723)
Q Consensus 525 r-~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p 603 (1723)
| +++|+|+|...|.|+||..||+...+.++|-...+..+.+.++|+.+||.+..+.++++||||+||||+|||||+..|
T Consensus 86 R~~~vGfVFQSF~Lip~ltAlENV~lPleL~ge~~~~~~~~A~~lL~~vGLg~Rl~HyP~qLSGGEQQRVAiARAfa~~P 165 (228)
T COG4181 86 RARHVGFVFQSFHLIPNLTALENVALPLELRGESSADSRAGAKALLEAVGLGKRLTHYPAQLSGGEQQRVALARAFAGRP 165 (228)
T ss_pred hccceeEEEEeeeccccchhhhhccchhhhcCCccccHHHHHHHHHHHhCcccccccCccccCchHHHHHHHHHHhcCCC
Confidence 4 789999999999999999999999999999766777788999999999999999999999999999999999999999
Q ss_pred cEeeccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEE
Q 000284 604 KVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKC 663 (1723)
Q Consensus 604 ~vliLDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~ 663 (1723)
+||+-||||-+||..+-+++.++|-.+. .|.|.+++|||...|.+ |||++-|.+|+|+.
T Consensus 166 ~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~LA~R-c~R~~r~~~G~l~~ 226 (228)
T COG4181 166 DVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQLAAR-CDRQLRLRSGRLVE 226 (228)
T ss_pred CEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHHHHHh-hhheeeeecceecc
Confidence 9999999999999999999999998774 48999999999999986 99999999999864
No 447
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.2e-39 Score=375.01 Aligned_cols=219 Identities=28% Similarity=0.418 Sum_probs=193.5
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCC-----CcceEEEccccCC---c
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNIT---A 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~---~ 519 (1723)
..|+++||+|.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+.+| ++|+|.++|.++. .
T Consensus 15 ~~l~~~~l~~~~~~----~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~ 90 (265)
T PRK14252 15 QKSEVNKLNFYYGG----YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSP 90 (265)
T ss_pred ceEEEEEEEEEECC----eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccccc
Confidence 46999999999953 3699999999999999999999999999999999999975 7999999998763 1
Q ss_pred --cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHH-HHHHHHHHHHHHcCCC----cccccccCCCChhHHHH
Q 000284 520 --DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEE-LLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRK 592 (1723)
Q Consensus 520 --~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~-~~~~~v~~~l~~~~l~----~~~~~~~~~LSgGqkqr 592 (1723)
.....++.+||+||++.+++. |++||+.+.....+.... ..++++.++++.+++. +..++.+.+||||||||
T Consensus 91 ~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qr 169 (265)
T PRK14252 91 EVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEVKDRLGDLAFNLSGGQQQR 169 (265)
T ss_pred ccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhhhHHHhCCcccCCHHHHHH
Confidence 234567889999999999986 999999876655555432 3456788888888874 45688899999999999
Q ss_pred HHHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 593 LSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 593 l~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
++|||||+.+|+++||||||+|||+.+++.++++|+++++++|||++||+++++..+|||+++|++|++++.|+...+.
T Consensus 170 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 248 (265)
T PRK14252 170 LCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFGATDTIF 248 (265)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999999999999999999999987899999999999999999999999999999999987764
No 448
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-38 Score=375.33 Aligned_cols=221 Identities=22% Similarity=0.404 Sum_probs=189.8
Q ss_pred CcceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCC
Q 000284 1351 DNAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIR 1425 (1723)
Q Consensus 1351 ~~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p-----~~G~i~i~G~~i~ 1425 (1723)
+.++|+++|+++.|++ +.+++++||+|++||++||+||||||||||+++|+|+++| ++|+|.++|+++.
T Consensus 17 ~~~~l~~~nl~~~~~~------~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~ 90 (274)
T PRK14265 17 DHSVFEVEGVKVFYGG------FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIY 90 (274)
T ss_pred CCceEEEeeEEEEeCC------eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecc
Confidence 4468999999999963 4699999999999999999999999999999999999863 6999999999885
Q ss_pred C---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHH
Q 000284 1426 S---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKR 1498 (1723)
Q Consensus 1426 ~---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~kq 1498 (1723)
. .....+++|||+||++.+++ .|+.||+.+....++... ..++.+.+.++.+++. +..++++.+|||||||
T Consensus 91 ~~~~~~~~~~~~i~~v~q~~~l~~-~tv~~nl~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~q 168 (274)
T PRK14265 91 DSQINSVKLRRQVGMVFQRPNPFP-KSIYENIAFAPRANGYKG-NLDELVEDSLRRAAIWEEVKDKLKEKGTALSGGQQQ 168 (274)
T ss_pred cccchhHHHhhcEEEEccCCcccc-ccHHHHHHhHHHhcCchH-HHHHHHHHHHHHcccchhhHHHhcCCcccCCHHHHH
Confidence 3 22345778999999998887 499999987654443321 2334556678887763 4578899999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEE---------CC
Q 000284 1499 KLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMV---------GG 1569 (1723)
Q Consensus 1499 rl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~---------~G 1569 (1723)
||+|||||+.+|++|||||||+|||+.+++.++++|++++ + + +|||++||+++++..+|||+++|+ +|
T Consensus 169 rv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~-~-~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G 245 (274)
T PRK14265 169 RLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELK-E-Q-YTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRG 245 (274)
T ss_pred HHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-c-C-CEEEEEeCCHHHHHHhCCEEEEEecccccccccCc
Confidence 9999999999999999999999999999999999999985 3 4 589999999999999999999998 89
Q ss_pred EEEEecChhHHHh
Q 000284 1570 QLRCIGSPQHLKT 1582 (1723)
Q Consensus 1570 ~l~~~g~~~~l~~ 1582 (1723)
++++.|+++++..
T Consensus 246 ~~~~~g~~~~~~~ 258 (274)
T PRK14265 246 KLVEFSPTEQMFG 258 (274)
T ss_pred eEEEeCCHHHHHh
Confidence 9999999988754
No 449
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=2.4e-39 Score=371.47 Aligned_cols=195 Identities=32% Similarity=0.478 Sum_probs=175.6
Q ss_pred eeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcceEEEccCCCCCCCCCHHHHHH
Q 000284 469 VNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLGVCPQYDILFPELTVREHLE 548 (1723)
Q Consensus 469 l~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~ 548 (1723)
++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.... ...+|+||++.+++.+||.||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~----~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPG----PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCC----hhheEEecCcccCCCCCHHHHHH
Confidence 57999999999999999999999999999999999999999999999875321 12489999999999999999998
Q ss_pred HHHH--hcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHH
Q 000284 549 MFAV--LKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQL 626 (1723)
Q Consensus 549 ~~~~--~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~ 626 (1723)
++.. ..+.+..+.++++.++++.+|+.+..++++.+||||||||++|||||+.+|+++||||||+|||+.+++.++++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~ 156 (230)
T TIGR01184 77 LAVDRVLPDLSKSERRAIVEEHIALVGLTEAADKRPGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEE 156 (230)
T ss_pred HHHHhcccCCCHHHHHHHHHHHHHHcCCHHHHcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHH
Confidence 7632 23445555667789999999999888999999999999999999999999999999999999999999999999
Q ss_pred HHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCH
Q 000284 627 IKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSS 667 (1723)
Q Consensus 627 l~~~~--~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~ 667 (1723)
|+++. .|+|||++||+++++..+||||++|++|++++.|+.
T Consensus 157 l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~ 199 (230)
T TIGR01184 157 LMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQI 199 (230)
T ss_pred HHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCc
Confidence 99874 389999999999999999999999999999988764
No 450
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-38 Score=372.03 Aligned_cols=219 Identities=25% Similarity=0.420 Sum_probs=191.4
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCCC-
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIRS- 1426 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p-----~~G~i~i~G~~i~~- 1426 (1723)
.++.+++++++|+ ++.+++|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|+++..
T Consensus 7 ~~~~~~~~~~~~~------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~ 80 (261)
T PRK14263 7 IVMDCKLDKIFYG------NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGK 80 (261)
T ss_pred ceEEEEeEEEEeC------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEecccc
Confidence 5789999999995 35699999999999999999999999999999999999986 79999999998853
Q ss_pred --ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCcc----ccCCCCCCCChhHHHHH
Q 000284 1427 --DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLK----HAKKPSFTLSGGNKRKL 1500 (1723)
Q Consensus 1427 --~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~----~~~~~~~~LSgG~kqrl 1500 (1723)
.....++.+||+||++.++ .+|+.||+.+.....+.. .+..+.+.++++.+++.+ ..++++++||||||||+
T Consensus 81 ~~~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrv 158 (261)
T PRK14263 81 GVDPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNRYK-GDLGDRVKHALQGAALWDEVKDKLKVSGLSLSGGQQQRL 158 (261)
T ss_pred ccchHhhhhceEEEecCCccc-cccHHHHHHHHHhhcCch-HHHHHHHHHHHHHcCCchhhhhhhhCCcccCCHHHHHHH
Confidence 2234577899999999887 599999998866554432 234467788899999853 45678899999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEE--------CCEEE
Q 000284 1501 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMV--------GGQLR 1572 (1723)
Q Consensus 1501 ~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~--------~G~l~ 1572 (1723)
+|||||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+||||++|+ +|+++
T Consensus 159 ~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~-~-~-~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~ 235 (261)
T PRK14263 159 CIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK-K-D-YTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLV 235 (261)
T ss_pred HHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c-C-CeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEE
Confidence 99999999999999999999999999999999999984 3 4 589999999999999999999996 89999
Q ss_pred EecChhHHHh
Q 000284 1573 CIGSPQHLKT 1582 (1723)
Q Consensus 1573 ~~g~~~~l~~ 1582 (1723)
+.|+++++.+
T Consensus 236 ~~g~~~~~~~ 245 (261)
T PRK14263 236 EMGPTAQIFQ 245 (261)
T ss_pred EeCCHHHHHh
Confidence 9999988764
No 451
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=4.8e-39 Score=364.98 Aligned_cols=202 Identities=24% Similarity=0.331 Sum_probs=182.7
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcc
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKG 527 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ 527 (1723)
..++++|+++.|++ +.+++++||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++... ..++.
T Consensus 10 ~~l~~~~l~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~--~~~~~ 83 (214)
T PRK13543 10 PLLAAHALAFSRNE----EPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRG--DRSRF 83 (214)
T ss_pred ceEEEeeEEEecCC----ceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccch--hhhhc
Confidence 57999999999953 3599999999999999999999999999999999999999999999999987542 34567
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEee
Q 000284 528 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVI 607 (1723)
Q Consensus 528 ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vli 607 (1723)
+||++|++.+++.+|+.||+.+....++.. .++.++++++.++|.+..++++.+||||||||++||||++.+|+++|
T Consensus 84 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~---~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~lll 160 (214)
T PRK13543 84 MAYLGHLPGLKADLSTLENLHFLCGLHGRR---AKQMPGSALAIVGLAGYEDTLVRQLSAGQKKRLALARLWLSPAPLWL 160 (214)
T ss_pred eEEeecCcccccCCcHHHHHHHHHHhcCCc---HHHHHHHHHHHcCChhhccCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999999999999999999998876655432 34567889999999988899999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeC
Q 000284 608 LDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMAN 658 (1723)
Q Consensus 608 LDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~ 658 (1723)
|||||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++++.
T Consensus 161 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 161 LDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 999999999999999999999875 589999999999999999999999864
No 452
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=4.3e-39 Score=367.71 Aligned_cols=201 Identities=24% Similarity=0.402 Sum_probs=179.1
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcceE
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 529 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 529 (1723)
+.++++++.|+ .+.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++..
T Consensus 23 l~~~~~~~~~~----~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~---------- 88 (224)
T cd03220 23 LGILGRKGEVG----EFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRGRVSSL---------- 88 (224)
T ss_pred hhhhhhhhhcC----CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEchh----------
Confidence 67888999884 3569999999999999999999999999999999999999999999999986521
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeecc
Q 000284 530 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 609 (1723)
Q Consensus 530 ~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 609 (1723)
..+...+++.+||+||+.+.....+.+..+.++++.++++.+++.+..++++++||||||||++|||||+.+|+++|||
T Consensus 89 -~~~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~llllD 167 (224)
T cd03220 89 -LGLGGGFNPELTGRENIYLNGRLLGLSRKEIDEKIDEIIEFSELGDFIDLPVKTYSSGMKARLAFAIATALEPDILLID 167 (224)
T ss_pred -hcccccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 1122345677999999998776666655666678899999999999899999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEec
Q 000284 610 EPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 665 (1723)
Q Consensus 610 EPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~G 665 (1723)
|||+|||+.+++.+++.|++++ +|+|||++||+++++..+|||+++|++|++++.|
T Consensus 168 EP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 224 (224)
T cd03220 168 EVLAVGDAAFQEKCQRRLRELLKQGKTVILVSHDPSSIKRLCDRALVLEKGKIRFDG 224 (224)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999885 4799999999999999999999999999998765
No 453
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.8e-39 Score=377.84 Aligned_cols=213 Identities=23% Similarity=0.435 Sum_probs=190.2
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhcc
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 527 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 527 (1723)
.|+++||++.|+.. ...+|+|+||+|++||+++|+|+||||||||+++|+|+++ ++|+|+++|.++.. ....+|+.
T Consensus 2 ~i~~~nls~~~~~~--~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~ 78 (275)
T cd03289 2 QMTVKDLTAKYTEG--GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKA 78 (275)
T ss_pred eEEEEEEEEEeCCC--CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhh
Confidence 37899999999632 2359999999999999999999999999999999999998 79999999998854 55677889
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCC-----------CChhHHHHHHHH
Q 000284 528 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRA-----------LSGGMKRKLSLG 596 (1723)
Q Consensus 528 ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~-----------LSgGqkqrl~lA 596 (1723)
|+||||++.+|+. |++||+..+. ..+ ++++.++++.+||.+..++.+.. ||||||||++||
T Consensus 79 i~~v~q~~~lf~~-tv~~nl~~~~---~~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~La 150 (275)
T cd03289 79 FGVIPQKVFIFSG-TFRKNLDPYG---KWS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLA 150 (275)
T ss_pred EEEECCCcccchh-hHHHHhhhcc---CCC----HHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHH
Confidence 9999999999985 9999996432 122 24677888999998888887766 999999999999
Q ss_pred HHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000284 597 IALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 673 (1723)
Q Consensus 597 ~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~ 673 (1723)
|||+.+|+|+||||||++||+.+++.+.+.|++..+++|||++||+++++.. ||||++|++|+++..|++.+|.+.
T Consensus 151 Rall~~p~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~-~dri~vl~~G~i~~~g~~~~l~~~ 226 (275)
T cd03289 151 RSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLE-CQRFLVIEENKVRQYDSIQKLLNE 226 (275)
T ss_pred HHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHh-CCEEEEecCCeEeecCCHHHHhhC
Confidence 9999999999999999999999999999999988788999999999999975 999999999999999999998763
No 454
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-40 Score=346.44 Aligned_cols=219 Identities=25% Similarity=0.390 Sum_probs=204.4
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCC-ccHHHHhcc
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNIT-ADMDEIRKG 527 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~-~~~~~~r~~ 527 (1723)
+|+++||+|+|+ ++.+++|+|++|++|.|++++||||||||||+++++.++++++|+|+++|+++. ++.+++.++
T Consensus 1 MI~i~nv~K~y~----~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~d~G~i~i~g~~~~~~~s~~LAk~ 76 (252)
T COG4604 1 MITIENVSKSYG----TKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKKDSGEITIDGLELTSTPSKELAKK 76 (252)
T ss_pred CeeehhhhHhhC----CEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhccccCceEEEeeeecccCChHHHHHH
Confidence 478999999994 567999999999999999999999999999999999999999999999999996 467788899
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHH--HhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcE
Q 000284 528 LGVCPQYDILFPELTVREHLEMFA--VLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 605 (1723)
Q Consensus 528 ig~~~Q~~~l~~~lTv~e~l~~~~--~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 605 (1723)
+.+.-|++..-..+||+|-+.|+. .-+|....+.+..++++++.++|++..|+...+||||||||.-||+.++.+.+.
T Consensus 77 lSILkQ~N~i~~rlTV~dLv~FGRfPYSqGRlt~eD~~~I~~aieyl~L~~l~dryLd~LSGGQrQRAfIAMVlaQdTdy 156 (252)
T COG4604 77 LSILKQENHINSRLTVRDLVGFGRFPYSQGRLTKEDRRIINEAIEYLHLEDLSDRYLDELSGGQRQRAFIAMVLAQDTDY 156 (252)
T ss_pred HHHHHhhchhhheeEHHHHhhcCCCcccCCCCchHHHHHHHHHHHHhcccchHHHhHHhcccchhhhhhhheeeeccCcE
Confidence 999999999999999999998853 346777777888999999999999999999999999999999999999999999
Q ss_pred eeccCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000284 606 VILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 671 (1723)
Q Consensus 606 liLDEPtsgLD~~~r~~l~~~l~~~~~--~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk 671 (1723)
++||||.++||.....++++.|+++.+ |+||+++-||.++|..++|.|+-|.+|+++..|+++++-
T Consensus 157 vlLDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINfAS~YsD~IVAlK~G~vv~~G~~~eii 224 (252)
T COG4604 157 VLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINFASCYSDHIVALKNGKVVKQGSPDEII 224 (252)
T ss_pred EEecCcccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccHHHhhhhheeeecCCEEEecCCHHHhc
Confidence 999999999999999999999999853 999999999999999999999999999999999987753
No 455
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.4e-39 Score=361.68 Aligned_cols=194 Identities=22% Similarity=0.322 Sum_probs=172.3
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCC---CCcceEEEccccCCccHHHHh
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP---PTTGDALVFGKNITADMDEIR 525 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~---p~~G~i~i~g~~i~~~~~~~r 525 (1723)
.+.++||+|.|+.+++++.+++|+||++++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.......+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~~~~~ 82 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFAEKYP 82 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccchhhhc
Confidence 57899999999876556789999999999999999999999999999999999999 899999999998865434567
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcE
Q 000284 526 KGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 605 (1723)
Q Consensus 526 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 605 (1723)
+.+||+||++.+++.+||+||+.+..... .++.+.+||||||||++||+||+.+|++
T Consensus 83 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----------------------~~~~~~~LS~Ge~qrl~laral~~~p~l 139 (202)
T cd03233 83 GEIIYVSEEDVHFPTLTVRETLDFALRCK-----------------------GNEFVRGISGGERKRVSIAEALVSRASV 139 (202)
T ss_pred ceEEEEecccccCCCCcHHHHHhhhhhhc-----------------------cccchhhCCHHHHHHHHHHHHHhhCCCE
Confidence 88999999999999999999998754211 5678899999999999999999999999
Q ss_pred eeccCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEE-cCCHHHHHhhcCEEEEEeCCEEEEec
Q 000284 606 VILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLT-THSMDEAEELGDRIAIMANGSLKCCG 665 (1723)
Q Consensus 606 liLDEPtsgLD~~~r~~l~~~l~~~~~--~~tiil~-TH~~~e~~~l~dri~il~~G~l~~~G 665 (1723)
+||||||+|||+.+++.++++|+++++ ++|+|++ +|+++++..+||++++|++|+++..|
T Consensus 140 lllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 140 LCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred EEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 999999999999999999999999853 5676665 55679999999999999999998654
No 456
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-38 Score=371.09 Aligned_cols=217 Identities=24% Similarity=0.375 Sum_probs=195.4
Q ss_pred ceEEEEeEEEEecCcC----------------CccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEE
Q 000284 448 RCIQIRKLHKVYATKR----------------GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDAL 511 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~----------------~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~ 511 (1723)
..|+++||+|.|...+ +.+.+++++||++++||+++|+||||||||||+++|+|+++|++|+|.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p~~G~I~ 82 (264)
T PRK13546 3 VSVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSPTVGKVD 82 (264)
T ss_pred ceEEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEE
Confidence 3588999999986521 335699999999999999999999999999999999999999999999
Q ss_pred EccccCCccHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHH
Q 000284 512 VFGKNITADMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKR 591 (1723)
Q Consensus 512 i~g~~i~~~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkq 591 (1723)
++|. +++++|++.+.+.+|+.||+.+.....+.+.++..+.++++++.+++.+..++++++|||||||
T Consensus 83 ~~g~------------~~~~~~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~q 150 (264)
T PRK13546 83 RNGE------------VSVIAISAGLSGQLTGIENIEFKMLCMGFKRKEIKAMTPKIIEFSELGEFIYQPVKKYSSGMRA 150 (264)
T ss_pred ECCE------------EeEEecccCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCCcccCCHHHHH
Confidence 9984 5678888878888999999987766666666666677888999999999899999999999999
Q ss_pred HHHHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHH
Q 000284 592 KLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 670 (1723)
Q Consensus 592 rl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~L 670 (1723)
|++||+||+.+|++|||||||+|||+.+++.+++.|.+++ +|+|||++||+++++..+||||++|++|++.+.|++.++
T Consensus 151 rv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiisH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 230 (264)
T PRK13546 151 KLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSHNLGQVRQFCTKIAWIEGGKLKDYGELDDV 230 (264)
T ss_pred HHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999985 589999999999999999999999999999999999888
Q ss_pred HhhhCC
Q 000284 671 KHQYGV 676 (1723)
Q Consensus 671 k~~~g~ 676 (1723)
..+++.
T Consensus 231 ~~~~~~ 236 (264)
T PRK13546 231 LPKYEA 236 (264)
T ss_pred HHHhHH
Confidence 776543
No 457
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=2.8e-39 Score=368.88 Aligned_cols=206 Identities=31% Similarity=0.503 Sum_probs=178.6
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhcce
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKGL 528 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~i 528 (1723)
++++|++|.|+++ .+.+++|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.++.. .....++.+
T Consensus 3 l~~~~l~~~~~~~--~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 3 IEFRNVSFSYPNQ--EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred EEEEEEEEEcCCC--CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 7899999999642 2469999999999999999999999999999999999999999999999998753 334467789
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccc-----------cCCCChhHHHHHHHHH
Q 000284 529 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIV-----------VRALSGGMKRKLSLGI 597 (1723)
Q Consensus 529 g~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~-----------~~~LSgGqkqrl~lA~ 597 (1723)
||+||++.+++ .|+.||+.+.... . .++++.++++.+++.+..++. +.+||||||||++|||
T Consensus 81 ~~~~q~~~~~~-~tv~e~l~~~~~~--~----~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~ 153 (220)
T cd03245 81 GYVPQDVTLFY-GTLRDNITLGAPL--A----DDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALAR 153 (220)
T ss_pred EEeCCCCcccc-chHHHHhhcCCCC--C----CHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHH
Confidence 99999998887 6999999764211 1 134566788888887766654 4699999999999999
Q ss_pred HHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEec
Q 000284 598 ALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 665 (1723)
Q Consensus 598 al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~G 665 (1723)
||+.+|+++||||||+|||+.+++.++++|+++++++|||++||+++++ .+|||+++|++|+++..|
T Consensus 154 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~-~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 154 ALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLL-DLVDRIIVMDSGRIVADG 220 (220)
T ss_pred HHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHH-HhCCEEEEEeCCeEeecC
Confidence 9999999999999999999999999999999987668999999999998 589999999999997653
No 458
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=1.2e-38 Score=371.12 Aligned_cols=219 Identities=26% Similarity=0.373 Sum_probs=189.5
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCC--CCCCcceEEEccccCCc-cHHHH
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGL--IPPTTGDALVFGKNITA-DMDEI 524 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl--~~p~~G~i~i~g~~i~~-~~~~~ 524 (1723)
..++++||++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+ ++|++|+|+++|.++.. .....
T Consensus 6 ~~l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~ 81 (252)
T CHL00131 6 PILEIKNLHASVNE----NEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEER 81 (252)
T ss_pred ceEEEEeEEEEeCC----EEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhh
Confidence 47999999999953 3699999999999999999999999999999999998 68999999999998754 22222
Q ss_pred h-cceEEEccCCCCCCCCCHHHHHHHHHHhc----CC---CHHHHHHHHHHHHHHcCCC-cccccccC-CCChhHHHHHH
Q 000284 525 R-KGLGVCPQYDILFPELTVREHLEMFAVLK----GV---KEELLESVVAEMVDEVGLA-DKVNIVVR-ALSGGMKRKLS 594 (1723)
Q Consensus 525 r-~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~----g~---~~~~~~~~v~~~l~~~~l~-~~~~~~~~-~LSgGqkqrl~ 594 (1723)
+ ..+++++|++.+++.+|+.+++.+..... +. ...+..+++.++++.+|+. ...++.+. +||||||||++
T Consensus 82 ~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~ 161 (252)
T CHL00131 82 AHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVNEGFSGGEKKRNE 161 (252)
T ss_pred heeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccccCCCHHHHHHHH
Confidence 3 35899999999999999999998754321 11 1223456788999999997 46788887 59999999999
Q ss_pred HHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000284 595 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEEL-GDRIAIMANGSLKCCGSSLFL 670 (1723)
Q Consensus 595 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l-~dri~il~~G~l~~~Gs~~~L 670 (1723)
||+||+.+|+++||||||+|||+.+++.++++|++++ +|+|||++||+++++..+ |||+++|++|+++..|+++.+
T Consensus 162 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 239 (252)
T CHL00131 162 ILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKIIKTGDAELA 239 (252)
T ss_pred HHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEEEecChhhh
Confidence 9999999999999999999999999999999999986 589999999999999887 899999999999999998744
No 459
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=8.5e-39 Score=365.23 Aligned_cols=202 Identities=27% Similarity=0.351 Sum_probs=176.5
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1434 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~~ 1434 (1723)
+.+++++++|+ ++.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++..
T Consensus 23 l~~~~~~~~~~------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~-------- 88 (224)
T cd03220 23 LGILGRKGEVG------EFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRGRVSSL-------- 88 (224)
T ss_pred hhhhhhhhhcC------CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEchh--------
Confidence 66788888885 3669999999999999999999999999999999999999999999999987531
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000284 1435 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1514 (1723)
Q Consensus 1435 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vll 1514 (1723)
..+...+++.+|++||+.+....++....+.++.+.++++.+++.+..++++.+||||||||++|||||+.+|++||
T Consensus 89 ---~~~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~lll 165 (224)
T cd03220 89 ---LGLGGGFNPELTGRENIYLNGRLLGLSRKEIDEKIDEIIEFSELGDFIDLPVKTYSSGMKARLAFAIATALEPDILL 165 (224)
T ss_pred ---hcccccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 11123345678999999887665555545555667888999999988999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000284 1515 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1575 (1723)
Q Consensus 1515 LDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g 1575 (1723)
|||||+|||+.+++.+++.|+++++ +| +|||++||+++++..+|||+++|++|++++.|
T Consensus 166 lDEP~~gLD~~~~~~~~~~l~~~~~-~~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 224 (224)
T cd03220 166 IDEVLAVGDAAFQEKCQRRLRELLK-QG-KTVILVSHDPSSIKRLCDRALVLEKGKIRFDG 224 (224)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHh-CC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999864 44 58999999999999999999999999998765
No 460
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=5.2e-39 Score=367.53 Aligned_cols=211 Identities=23% Similarity=0.343 Sum_probs=183.6
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhc
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRK 526 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~ 526 (1723)
..|+++||+|.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +....++
T Consensus 6 ~~i~~~~l~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (225)
T PRK10247 6 PLLQLQNVGYLAGD----AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQ 81 (225)
T ss_pred ceEEEeccEEeeCC----ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHh
Confidence 46999999999953 469999999999999999999999999999999999999999999999998753 3445678
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-cccccccCCCChhHHHHHHHHHHHhcCCcE
Q 000284 527 GLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA-DKVNIVVRALSGGMKRKLSLGIALIGDSKV 605 (1723)
Q Consensus 527 ~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 605 (1723)
.+||+||++.+++. |++||+.+....++... .+++++++++.+|+. ...++++.+||||||||++|||||+.+|++
T Consensus 82 ~i~~~~q~~~l~~~-tv~enl~~~~~~~~~~~--~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~l 158 (225)
T PRK10247 82 QVSYCAQTPTLFGD-TVYDNLIFPWQIRNQQP--DPAIFLDDLERFALPDTILTKNIAELSGGEKQRISLIRNLQFMPKV 158 (225)
T ss_pred ccEEEecccccccc-cHHHHHHhHHhhcCCCh--HHHHHHHHHHHcCCChHHhcCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 89999999998875 99999987654444322 245678999999996 467999999999999999999999999999
Q ss_pred eeccCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEEe-CCEEEEecC
Q 000284 606 VILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMA-NGSLKCCGS 666 (1723)
Q Consensus 606 liLDEPtsgLD~~~r~~l~~~l~~~~--~~~tiil~TH~~~e~~~l~dri~il~-~G~l~~~Gs 666 (1723)
+||||||+|||+.+++.+.++|++++ .|+|||++||+++++. .|||+++|+ ++..+.+|+
T Consensus 159 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~-~~d~i~~l~~~~~~~~~~~ 221 (225)
T PRK10247 159 LLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEIN-HADKVITLQPHAGEMQEAR 221 (225)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHH-hCCEEEEEecccchHhhhh
Confidence 99999999999999999999999984 3899999999999997 599999995 444444444
No 461
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-39 Score=335.67 Aligned_cols=222 Identities=27% Similarity=0.449 Sum_probs=202.0
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1433 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~ 1433 (1723)
++.+++++.+|++. ...+++|+|++|.+||.+.++||+|||||||+++++|+.+|+.|+|.++|+.|.....
T Consensus 3 ~l~~~~~sl~y~g~----~~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~~G~i~l~~r~i~gPga---- 74 (259)
T COG4525 3 MLNVSHLSLSYEGK----PRSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPSRGSIQLNGRRIEGPGA---- 74 (259)
T ss_pred eeehhheEEecCCc----chhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcccceEEECCEeccCCCc----
Confidence 46789999999753 2569999999999999999999999999999999999999999999999999875432
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000284 1434 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1513 (1723)
Q Consensus 1434 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vl 1513 (1723)
.=|.|+|+++|+|.+|+.||+.|..+++|+++.+..+.+.+.+..+||.+..++.+.+||||||||+.|||||+-+|++|
T Consensus 75 ergvVFQ~~~LlPWl~~~dNvafgL~l~Gi~k~~R~~~a~q~l~~VgL~~~~~~~i~qLSGGmrQRvGiARALa~eP~~L 154 (259)
T COG4525 75 ERGVVFQNEALLPWLNVIDNVAFGLQLRGIEKAQRREIAHQMLALVGLEGAEHKYIWQLSGGMRQRVGIARALAVEPQLL 154 (259)
T ss_pred cceeEeccCccchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCcccccccceEeecchHHHHHHHHHHhhcCcceE
Confidence 25899999999999999999999999999999988899999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEE--CCEEEEecChhHHHhhcC
Q 000284 1514 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMV--GGQLRCIGSPQHLKTRFG 1585 (1723)
Q Consensus 1514 lLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~--~G~l~~~g~~~~l~~~~~ 1585 (1723)
+||||..+||.-.|+.+.++|.++.++.|+ .++++|||.||+.-+++|+++|+ .||+++.-+++ .-.+|-
T Consensus 155 lLDEPfgAlDa~tRe~mQelLldlw~~tgk-~~lliTH~ieEAlflatrLvvlsp~pgRvv~~~~~d-f~rR~a 226 (259)
T COG4525 155 LLDEPFGALDALTREQMQELLLDLWQETGK-QVLLITHDIEEALFLATRLVVLSPGPGRVVERLPLD-FARRYA 226 (259)
T ss_pred eecCchhhHHHHHHHHHHHHHHHHHHHhCC-eEEEEeccHHHHHhhhheeEEecCCCceeeEecCCC-HHHHhh
Confidence 999999999999999999999998877764 79999999999999999999997 57898877665 333443
No 462
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.3e-38 Score=361.46 Aligned_cols=204 Identities=25% Similarity=0.318 Sum_probs=181.9
Q ss_pred cceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHh
Q 000284 1352 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAA 1431 (1723)
Q Consensus 1352 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~ 1431 (1723)
+++|+++|++|+|++ +.+++++||++++||++||+|+||||||||+++|+|+++|++|+|.++|+++... ..
T Consensus 9 ~~~l~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~--~~ 80 (214)
T PRK13543 9 PPLLAAHALAFSRNE------EPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRG--DR 80 (214)
T ss_pred cceEEEeeEEEecCC------ceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccch--hh
Confidence 357999999999953 4599999999999999999999999999999999999999999999999988642 33
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000284 1432 RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1511 (1723)
Q Consensus 1432 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~ 1511 (1723)
++.+||++|++.+++.+|++||+.+....++.. .++.+.++++.+++.+..++++.+||||||||++||||++.+|+
T Consensus 81 ~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~---~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~ 157 (214)
T PRK13543 81 SRFMAYLGHLPGLKADLSTLENLHFLCGLHGRR---AKQMPGSALAIVGLAGYEDTLVRQLSAGQKKRLALARLWLSPAP 157 (214)
T ss_pred hhceEEeecCcccccCCcHHHHHHHHHHhcCCc---HHHHHHHHHHHcCChhhccCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 457999999998988899999998876554432 33456788999999988899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEEC
Q 000284 1512 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVG 1568 (1723)
Q Consensus 1512 vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~ 1568 (1723)
+|||||||+|||+.+++.+++.|+++++ +| +|||++||+++++..+|||+++++.
T Consensus 158 llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 158 LWLLDEPYANLDLEGITLVNRMISAHLR-GG-GAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHh-CC-CEEEEEecChhhhhhhcceEEEEee
Confidence 9999999999999999999999999854 44 5899999999999999999999864
No 463
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-38 Score=378.73 Aligned_cols=220 Identities=24% Similarity=0.398 Sum_probs=191.8
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCC-----CCcceEEEccccCCc---
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA--- 519 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~--- 519 (1723)
..|+++||++.|++ +.+|+++||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++..
T Consensus 44 ~~l~i~nl~~~~~~----~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~ 119 (305)
T PRK14264 44 AKLSVEDLDVYYGD----DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGV 119 (305)
T ss_pred ceEEEEEEEEEeCC----eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccc
Confidence 46999999999953 469999999999999999999999999999999999986 699999999998753
Q ss_pred cHHHHhcceEEEccCCCCCCCCCHHHHHHHHHHhc------------CCC-HHHHHHHHHHHHHHcCCC----ccccccc
Q 000284 520 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLK------------GVK-EELLESVVAEMVDEVGLA----DKVNIVV 582 (1723)
Q Consensus 520 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~------------g~~-~~~~~~~v~~~l~~~~l~----~~~~~~~ 582 (1723)
+...+|+.+|||||++.+++. ||+||+.+..... +.. ....++++.++++.+++. +..++++
T Consensus 120 ~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 198 (305)
T PRK14264 120 NLVELRKRVGMVFQSPNPFPK-SIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEVNDRLDDNA 198 (305)
T ss_pred cHHHHhhceEEEccCCccccc-cHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhhhHHhcCcc
Confidence 234567889999999988874 9999998764322 121 123356788999999884 4568889
Q ss_pred CCCChhHHHHHHHHHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEE-EEEeCCEE
Q 000284 583 RALSGGMKRKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRI-AIMANGSL 661 (1723)
Q Consensus 583 ~~LSgGqkqrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri-~il~~G~l 661 (1723)
.+||||||||++||+||+.+|++|||||||+|||+.+++.++++|+++++++|||++||+++++..+|||+ ++|++|++
T Consensus 199 ~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l~~G~i 278 (305)
T PRK14264 199 LGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFLTGGEL 278 (305)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEecCCEE
Confidence 99999999999999999999999999999999999999999999999977789999999999999999997 46799999
Q ss_pred EEecCHHHHHh
Q 000284 662 KCCGSSLFLKH 672 (1723)
Q Consensus 662 ~~~Gs~~~Lk~ 672 (1723)
++.|++.++.+
T Consensus 279 ~~~g~~~~~~~ 289 (305)
T PRK14264 279 VEYDDTDKIFE 289 (305)
T ss_pred EEeCCHHHHHh
Confidence 99999877643
No 464
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-39 Score=341.45 Aligned_cols=220 Identities=27% Similarity=0.386 Sum_probs=193.6
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhc
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAAR 1432 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~~ 1432 (1723)
+|+++||+.+-. .+..++++||++++||+.||+||||||||||+|.|+|.+.|++|++.++|.++.. .+.++.
T Consensus 1 mi~a~nls~~~~------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA 74 (259)
T COG4559 1 MIRAENLSYSLA------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELA 74 (259)
T ss_pred CeeeeeeEEEee------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHH
Confidence 478999999875 3568999999999999999999999999999999999999999999999999876 456667
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChh--hHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhc--
Q 000284 1433 RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEY--RMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIG-- 1508 (1723)
Q Consensus 1433 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~--~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~-- 1508 (1723)
++-+++||+..+-...||+|-+.+...-.+...+ +..+.+++.|.+.++...+.+...+|||||||||.+||.|+.
T Consensus 75 ~~raVlpQ~s~laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la~R~y~~LSGGEqQRVqlARvLaQl~ 154 (259)
T COG4559 75 RHRAVLPQNSSLAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDLSGLAGRDYRTLSGGEQQRVQLARVLAQLW 154 (259)
T ss_pred HHhhhcccCcccccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcChhhhhccchhhcCchHHHHHHHHHHHHHcc
Confidence 7789999998775568999999886544322222 445568889999999999999999999999999999999965
Q ss_pred ----CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000284 1509 ----DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1581 (1723)
Q Consensus 1509 ----~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~ 1581 (1723)
++++|+|||||+.||+..+..++++.++++++ | ..|+.+-||++.+..+||||++|.+||+++.|+|++..
T Consensus 155 ~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~-g-~~V~~VLHDLNLAA~YaDrivll~~Grv~a~g~p~~vl 229 (259)
T COG4559 155 PPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE-G-GAVLAVLHDLNLAAQYADRIVLLHQGRVIASGSPQDVL 229 (259)
T ss_pred CCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc-C-CcEEEEEccchHHHHhhheeeeeeCCeEeecCCHHHhc
Confidence 45699999999999999999999999999854 4 47999999999999999999999999999999998764
No 465
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.8e-39 Score=367.96 Aligned_cols=218 Identities=25% Similarity=0.396 Sum_probs=181.2
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhcc
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAARR 1433 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~~~ 1433 (1723)
|+++|+++.|++ .+.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .....++
T Consensus 3 l~~~~l~~~~~~-----~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 77 (229)
T cd03254 3 IEFENVNFSYDE-----KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRS 77 (229)
T ss_pred EEEEEEEEecCC-----CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhh
Confidence 789999999963 2358999999999999999999999999999999999999999999999998754 3445677
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHH-----HHHHHHHHc--CCccccCCCCCCCChhHHHHHHHHHHH
Q 000284 1434 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDD-----VVMEKLVEF--DLLKHAKKPSFTLSGGNKRKLSVAIAM 1506 (1723)
Q Consensus 1434 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~kqrl~iA~al 1506 (1723)
.+||+||++.+++. |++||+.++.... ...+..+ ...+.++.+ ++....++++.+|||||||||+||+||
T Consensus 78 ~i~~~~q~~~~~~~-tv~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al 154 (229)
T cd03254 78 MIGVVLQDTFLFSG-TIMENIRLGRPNA--TDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAM 154 (229)
T ss_pred hEEEecCCchhhhh-HHHHHHhccCCCC--CHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHH
Confidence 89999999988775 9999997653211 1111111 112233333 444556677899999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhc
Q 000284 1507 IGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRF 1584 (1723)
Q Consensus 1507 ~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~~ 1584 (1723)
+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||++++++. |||+++|++|+++..|+.+++.+++
T Consensus 155 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~-~-~tii~~sh~~~~~~~-~d~i~~l~~g~~~~~~~~~~~~~~~ 228 (229)
T cd03254 155 LRDPKILILDEATSNIDTETEKLIQEALEKLM-K-G-RTSIIIAHRLSTIKN-ADKILVLDDGKIIEEGTHDELLAKK 228 (229)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-C-C-CEEEEEecCHHHHhh-CCEEEEEeCCeEEEeCCHHHHHhhC
Confidence 99999999999999999999999999999984 3 4 589999999999975 9999999999999999988887654
No 466
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=6.7e-39 Score=371.78 Aligned_cols=212 Identities=22% Similarity=0.313 Sum_probs=184.8
Q ss_pred EEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhccc
Q 000284 1356 YLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAARRL 1434 (1723)
Q Consensus 1356 ~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~~~~ 1434 (1723)
+++||++. .+|+|+||++++||++||+|+||||||||+++|+|+++ .+|+|.++|+++.. .....++.
T Consensus 2 ~~~~l~~~----------~~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~~G~i~~~g~~i~~~~~~~~~~~ 70 (248)
T PRK03695 2 QLNDVAVS----------TRLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-GSGSIQFAGQPLEAWSAAELARH 70 (248)
T ss_pred cccccchh----------ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-CCeEEEECCEecCcCCHHHHhhh
Confidence 46777763 17999999999999999999999999999999999985 59999999999865 34455667
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhc------
Q 000284 1435 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIG------ 1508 (1723)
Q Consensus 1435 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~------ 1508 (1723)
+||+||++.+++.+|++||+.+.... +.+..+..+++.++++.+++.+..++++.+||||||||++||+||+.
T Consensus 71 i~~v~q~~~~~~~~tv~~nl~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~~~~~~ 149 (248)
T PRK03695 71 RAYLSQQQTPPFAMPVFQYLTLHQPD-KTRTEAVASALNEVAEALGLDDKLGRSVNQLSGGEWQRVRLAAVVLQVWPDIN 149 (248)
T ss_pred eEEecccCccCCCccHHHHHHhcCcc-CCCcHHHHHHHHHHHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHhccccccC
Confidence 99999998888889999999875322 22333345677889999999888899999999999999999999997
Q ss_pred -CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000284 1509 -DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1581 (1723)
Q Consensus 1509 -~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~ 1581 (1723)
+|++|||||||+|||+.+++.+.++|+++++ +| +|||++||+++++..+|||+++|++|+++..|+++++.
T Consensus 150 p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~-~~-~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 221 (248)
T PRK03695 150 PAGQLLLLDEPMNSLDVAQQAALDRLLSELCQ-QG-IAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRRDEVL 221 (248)
T ss_pred CCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CC-CEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 6799999999999999999999999999863 44 58999999999999999999999999999999987764
No 467
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=5.8e-39 Score=375.26 Aligned_cols=212 Identities=25% Similarity=0.402 Sum_probs=187.0
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhcc
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAARR 1433 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~~~ 1433 (1723)
|+++|+++.|+++ ...+|+|+||+|++||++||+|+||||||||+++|+|+++ ++|+|+++|.++.. ....+|+
T Consensus 3 i~~~nls~~~~~~----~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~ 77 (275)
T cd03289 3 MTVKDLTAKYTEG----GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRK 77 (275)
T ss_pred EEEEEEEEEeCCC----CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhh
Confidence 7899999999632 3459999999999999999999999999999999999998 79999999999865 4556788
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCC-----------CChhHHHHHHH
Q 000284 1434 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFT-----------LSGGNKRKLSV 1502 (1723)
Q Consensus 1434 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----------LSgG~kqrl~i 1502 (1723)
+|+||||++.+++ .|++||+..+.. .. .+.+.+.++.+||.+..++.+.. ||||||||++|
T Consensus 78 ~i~~v~q~~~lf~-~tv~~nl~~~~~---~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~L 149 (275)
T cd03289 78 AFGVIPQKVFIFS-GTFRKNLDPYGK---WS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCL 149 (275)
T ss_pred hEEEECCCcccch-hhHHHHhhhccC---CC----HHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHH
Confidence 9999999999987 599999964421 12 23566788899998888887776 99999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1503 AIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1503 A~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
||||+.+|+||||||||+|||+.+++.+.+.|+++. .+ +|||++||+++++.. ||||++|++|+++..|+++++.+
T Consensus 150 aRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~--~~-~tii~isH~~~~i~~-~dri~vl~~G~i~~~g~~~~l~~ 225 (275)
T cd03289 150 ARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF--AD-CTVILSEHRIEAMLE-CQRFLVIEENKVRQYDSIQKLLN 225 (275)
T ss_pred HHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc--CC-CEEEEEECCHHHHHh-CCEEEEecCCeEeecCCHHHHhh
Confidence 999999999999999999999999999999999863 34 689999999999875 99999999999999999999977
Q ss_pred h
Q 000284 1583 R 1583 (1723)
Q Consensus 1583 ~ 1583 (1723)
.
T Consensus 226 ~ 226 (275)
T cd03289 226 E 226 (275)
T ss_pred C
Confidence 4
No 468
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=375.13 Aligned_cols=219 Identities=22% Similarity=0.375 Sum_probs=184.7
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1432 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~ 1432 (1723)
.+|+++|++|+|++ ++.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++.. ...+
T Consensus 5 ~~l~~~~l~~~~~~-----~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~--~~~~ 77 (272)
T PRK15056 5 AGIVVNDVTVTWRN-----GHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQ--ALQK 77 (272)
T ss_pred ceEEEEeEEEEecC-----CcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHH--hhcc
Confidence 36899999999963 2469999999999999999999999999999999999999999999999998742 1223
Q ss_pred cceEEEecCCCCC--CCCCHHHHHHHHHH----HcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHH
Q 000284 1433 RLIGYCPQFDALL--EYLTVQEHLELYAR----IKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAM 1506 (1723)
Q Consensus 1433 ~~ig~~pQ~~~l~--~~lTv~e~l~~~~~----~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al 1506 (1723)
+.+||+||++.+. ...++++++.+... ..+.+....++.+.++++.++|.+..++++.+||||||||++|||||
T Consensus 78 ~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qrv~laraL 157 (272)
T PRK15056 78 NLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQIGELSGGQKKRVFLARAI 157 (272)
T ss_pred ceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCcccCCHHHHHHHHHHHHH
Confidence 4699999997652 23478888754211 11112233345677889999999889999999999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000284 1507 IGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1581 (1723)
Q Consensus 1507 ~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~ 1581 (1723)
+.+|++|||||||+|||+.+++.+.+.|++++ ++| +|||++||+++++..+|||++++ +|+++..|+++++.
T Consensus 158 ~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~-~~g-~tviivsH~~~~~~~~~d~v~~~-~G~i~~~g~~~~~~ 229 (272)
T PRK15056 158 AQQGQVILLDEPFTGVDVKTEARIISLLRELR-DEG-KTMLVSTHNLGSVTEFCDYTVMV-KGTVLASGPTETTF 229 (272)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHH-hCC-CEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHhcc
Confidence 99999999999999999999999999999986 344 58999999999999999999777 89999999988764
No 469
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.8e-39 Score=416.59 Aligned_cols=218 Identities=27% Similarity=0.443 Sum_probs=191.7
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhc
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRK 526 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~ 526 (1723)
..|+++|++++|+..+ ..+|+|+||+|++||.+||+|+||||||||+|+|+|+++|++|+|++||+|+.. +...+|+
T Consensus 470 g~I~~~nvsf~y~~~~--~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~ 547 (709)
T COG2274 470 GEIEFENVSFRYGPDD--PPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRR 547 (709)
T ss_pred ceEEEEEEEEEeCCCC--cchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHh
Confidence 3699999999997643 369999999999999999999999999999999999999999999999999964 8889999
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-----------CcccccccCCCChhHHHHHHH
Q 000284 527 GLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGL-----------ADKVNIVVRALSGGMKRKLSL 595 (1723)
Q Consensus 527 ~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l-----------~~~~~~~~~~LSgGqkqrl~l 595 (1723)
+||||+|++.||.. |++||+.++.. ..+ .+++.++++..|. +.........||||||||++|
T Consensus 548 ~ig~V~Q~~~Lf~g-SI~eNi~l~~p--~~~----~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlal 620 (709)
T COG2274 548 QVGYVLQDPFLFSG-SIRENIALGNP--EAT----DEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLAL 620 (709)
T ss_pred heeEEcccchhhcC-cHHHHHhcCCC--CCC----HHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHH
Confidence 99999999999987 99999998532 112 2344444444433 333345556899999999999
Q ss_pred HHHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhhhC
Q 000284 596 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYG 675 (1723)
Q Consensus 596 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~g 675 (1723)
||||+.+|+|||||||||+||+.+.+.+.+.|.+..+|+|+|++||++..+. .||||+||++|+++.+|++++|.+.-|
T Consensus 621 ARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~-~adrIiVl~~Gkiv~~gs~~ell~~~g 699 (709)
T COG2274 621 ARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIR-SADRIIVLDQGKIVEQGSHEELLAQGG 699 (709)
T ss_pred HHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhh-hccEEEEccCCceeccCCHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999997 599999999999999999999998833
No 470
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-38 Score=368.43 Aligned_cols=219 Identities=21% Similarity=0.388 Sum_probs=191.1
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeCCC--
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDIRS-- 1426 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~-----p~~G~i~i~G~~i~~-- 1426 (1723)
+++++||++.|++ +.+++|+||+|++||++||+|+||||||||+++|+|+.+ |++|+|.++|.++..
T Consensus 3 ~l~~~~v~~~~~~------~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~ 76 (250)
T PRK14266 3 RIEVENLNTYFDD------AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPA 76 (250)
T ss_pred EEEEEeEEEEeCC------eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEccccc
Confidence 5889999999952 459999999999999999999999999999999999864 489999999998854
Q ss_pred -ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCC-hhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHHH
Q 000284 1427 -DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVA-EYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRKL 1500 (1723)
Q Consensus 1427 -~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~kqrl 1500 (1723)
.....++++||+||++.+++. |+.||+.+.....+.. ....++++.++++.+++. +..++++.+||||||||+
T Consensus 77 ~~~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qrv 155 (250)
T PRK14266 77 VDVVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDKLDKSALGLSGGQQQRL 155 (250)
T ss_pred ccHHHHhhheEEEecCCccCcc-hHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHHHhCCcccCCHHHHHHH
Confidence 234567789999999988874 9999998754444332 234556778889999874 346889999999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000284 1501 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1580 (1723)
Q Consensus 1501 ~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l 1580 (1723)
+|||||+.+|++|||||||+|||+.+++.++++|++++ + + +|||++||+++++..+|||+++|++|++++.|+++++
T Consensus 156 ~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~-~-~-~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14266 156 CIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLK-E-D-YTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQI 232 (250)
T ss_pred HHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-c-C-CeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHH
Confidence 99999999999999999999999999999999999984 3 4 5899999999999999999999999999999999887
Q ss_pred Hh
Q 000284 1581 KT 1582 (1723)
Q Consensus 1581 ~~ 1582 (1723)
..
T Consensus 233 ~~ 234 (250)
T PRK14266 233 FI 234 (250)
T ss_pred Hh
Confidence 54
No 471
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=8.3e-39 Score=369.38 Aligned_cols=220 Identities=22% Similarity=0.408 Sum_probs=181.7
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhcc
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAARR 1433 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~~~ 1433 (1723)
++++|+++.|++. +++.+++|+||++++||++||+|+||||||||+++|+|+++|++|+|.++|.++.. .....++
T Consensus 1 l~i~~l~~~~~~~---~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 77 (238)
T cd03249 1 IEFKNVSFRYPSR---PDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRS 77 (238)
T ss_pred CeEEEEEEecCCC---CCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHh
Confidence 4689999999642 12469999999999999999999999999999999999999999999999998754 3344567
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHH-----HHHHHHHHc--CCccccCCCCCCCChhHHHHHHHHHHH
Q 000284 1434 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDD-----VVMEKLVEF--DLLKHAKKPSFTLSGGNKRKLSVAIAM 1506 (1723)
Q Consensus 1434 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~kqrl~iA~al 1506 (1723)
++||+||++.+++ .|++||+.+....+ ...+..+ .+.+.++.+ ++....++++.+|||||||||+||+||
T Consensus 78 ~i~~~~q~~~~~~-~tv~e~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al 154 (238)
T cd03249 78 QIGLVSQEPVLFD-GTIAENIRYGKPDA--TDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARAL 154 (238)
T ss_pred hEEEECCchhhhh-hhHHHHhhccCCCC--CHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHH
Confidence 7999999988876 69999997642211 1111111 112233333 455566788999999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhc
Q 000284 1507 IGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRF 1584 (1723)
Q Consensus 1507 ~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~~ 1584 (1723)
+.+|++|||||||+|||+.+++.+++.|++++ +| +|||++||++++++ +|||+++|++|++++.|+.+++....
T Consensus 155 ~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~--~g-~~vi~~sh~~~~~~-~~d~v~~l~~G~i~~~~~~~~~~~~~ 228 (238)
T cd03249 155 LRNPKILLLDEATSALDAESEKLVQEALDRAM--KG-RTTIVIAHRLSTIR-NADLIAVLQNGQVVEQGTHDELMAQK 228 (238)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHHHHHHhc--CC-CEEEEEeCCHHHHh-hCCEEEEEECCEEEEeCCHHHHhhcC
Confidence 99999999999999999999999999999984 34 58999999999998 79999999999999999988876543
No 472
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-38 Score=367.67 Aligned_cols=220 Identities=21% Similarity=0.345 Sum_probs=193.6
Q ss_pred ceEEEEeEEEEcCCCC--------------ccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEE
Q 000284 1353 AIIYLRNLRKVYPGGK--------------RSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAF 1418 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~--------------~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~ 1418 (1723)
..|+++||+|.|...+ ....+.+++++||+|++||++||+||||||||||+++|+|+++|++|+|.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p~~G~I~ 82 (264)
T PRK13546 3 VSVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSPTVGKVD 82 (264)
T ss_pred ceEEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEE
Confidence 3588999999986531 11345699999999999999999999999999999999999999999999
Q ss_pred EcCeeCCCChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHH
Q 000284 1419 IFGKDIRSDPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKR 1498 (1723)
Q Consensus 1419 i~G~~i~~~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kq 1498 (1723)
++|. +++++|...+.+.+|+.||+.+.....+...++..+.+.++++.+++.+..++++.+|||||||
T Consensus 83 ~~g~------------~~~~~~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~q 150 (264)
T PRK13546 83 RNGE------------VSVIAISAGLSGQLTGIENIEFKMLCMGFKRKEIKAMTPKIIEFSELGEFIYQPVKKYSSGMRA 150 (264)
T ss_pred ECCE------------EeEEecccCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCCcccCCHHHHH
Confidence 9884 4678888777788999999987665556655555566677888899998899999999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChh
Q 000284 1499 KLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQ 1578 (1723)
Q Consensus 1499 rl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~ 1578 (1723)
|++||+||+.+|++|||||||+|||+.+++.+++.|.+++ +.| +|||++||+++++..+||||++|++|++++.|+++
T Consensus 151 rv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~-~~g-~tiIiisH~~~~i~~~~d~i~~l~~G~i~~~g~~~ 228 (264)
T PRK13546 151 KLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFK-EQN-KTIFFVSHNLGQVRQFCTKIAWIEGGKLKDYGELD 228 (264)
T ss_pred HHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHH-HCC-CEEEEEcCCHHHHHHHcCEEEEEECCEEEEeCCHH
Confidence 9999999999999999999999999999999999999985 444 58999999999999999999999999999999999
Q ss_pred HHHhhcCC
Q 000284 1579 HLKTRFGN 1586 (1723)
Q Consensus 1579 ~l~~~~~~ 1586 (1723)
++..+++.
T Consensus 229 ~~~~~~~~ 236 (264)
T PRK13546 229 DVLPKYEA 236 (264)
T ss_pred HHHHHhHH
Confidence 98876544
No 473
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=6.9e-39 Score=371.64 Aligned_cols=210 Identities=23% Similarity=0.385 Sum_probs=186.0
Q ss_pred EEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhcceE
Q 000284 451 QIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKGLG 529 (1723)
Q Consensus 451 ~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ig 529 (1723)
+++||++. .+|+|+||++++||+++|+|+||||||||+++|+|++++ +|+|.++|.++.. .....++.+|
T Consensus 2 ~~~~l~~~--------~~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~~-~G~i~~~g~~i~~~~~~~~~~~i~ 72 (248)
T PRK03695 2 QLNDVAVS--------TRLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLPG-SGSIQFAGQPLEAWSAAELARHRA 72 (248)
T ss_pred cccccchh--------ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC-CeEEEECCEecCcCCHHHHhhheE
Confidence 46777763 289999999999999999999999999999999999865 9999999998853 3445667799
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhc-------C
Q 000284 530 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIG-------D 602 (1723)
Q Consensus 530 ~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~-------~ 602 (1723)
|+||++.+++.+|+.||+.++... +.+.++.+++++++++.+||.+..++.+++||||||||++||+||+. +
T Consensus 73 ~v~q~~~~~~~~tv~~nl~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~~~~~~p~ 151 (248)
T PRK03695 73 YLSQQQTPPFAMPVFQYLTLHQPD-KTRTEAVASALNEVAEALGLDDKLGRSVNQLSGGEWQRVRLAAVVLQVWPDINPA 151 (248)
T ss_pred EecccCccCCCccHHHHHHhcCcc-CCCcHHHHHHHHHHHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHhccccccCCC
Confidence 999999888889999999876322 23344456788999999999988899999999999999999999998 7
Q ss_pred CcEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHH
Q 000284 603 SKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 670 (1723)
Q Consensus 603 p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~L 670 (1723)
|+++||||||+|||+.+++.+.++|++++ +|+|||++||+++++..+|||+++|++|+++..|++.++
T Consensus 152 p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 220 (248)
T PRK03695 152 GQLLLLDEPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRRDEV 220 (248)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 79999999999999999999999999986 589999999999999999999999999999999987665
No 474
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=2.6e-38 Score=368.49 Aligned_cols=219 Identities=23% Similarity=0.318 Sum_probs=187.2
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCC--CCCCceEEEEcCeeCCCC-hH
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGE--EYPTDGTAFIFGKDIRSD-PK 1429 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~--~~p~~G~i~i~G~~i~~~-~~ 1429 (1723)
.+|+++||++.|++ +.+++|+||++++||++||+|+||||||||+++|+|+ ++|++|+|+++|.++... ..
T Consensus 6 ~~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~ 79 (252)
T CHL00131 6 PILEIKNLHASVNE------NEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPE 79 (252)
T ss_pred ceEEEEeEEEEeCC------EEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChh
Confidence 47999999999953 4599999999999999999999999999999999998 589999999999988653 22
Q ss_pred Hhc-cceEEEecCCCCCCCCCHHHHHHHHHHHc----CCC---hhhHHHHHHHHHHHcCCc-cccCCCCC-CCChhHHHH
Q 000284 1430 AAR-RLIGYCPQFDALLEYLTVQEHLELYARIK----GVA---EYRMDDVVMEKLVEFDLL-KHAKKPSF-TLSGGNKRK 1499 (1723)
Q Consensus 1430 ~~~-~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~----g~~---~~~~~~~~~~~l~~~~l~-~~~~~~~~-~LSgG~kqr 1499 (1723)
..+ ..++|+||++.+++.+|+.+++.+..... +.. ..+..+.+.++++.+++. ...++++. .||||||||
T Consensus 80 ~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qr 159 (252)
T CHL00131 80 ERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVNEGFSGGEKKR 159 (252)
T ss_pred hhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccccCCCHHHHHH
Confidence 222 25899999999999999999987643321 111 112345677889999997 46788887 599999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHH-cCEEEEEECCEEEEecChh
Q 000284 1500 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQAL-CTRIGIMVGGQLRCIGSPQ 1578 (1723)
Q Consensus 1500 l~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l-~drv~im~~G~l~~~g~~~ 1578 (1723)
|+||+||+.+|++|||||||+|||+.+++.++++|++++ ++| +|||++||++++++.+ |||+++|++|+++..|+++
T Consensus 160 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~g-~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~~~~~~ 237 (252)
T CHL00131 160 NEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLM-TSE-NSIILITHYQRLLDYIKPDYVHVMQNGKIIKTGDAE 237 (252)
T ss_pred HHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH-hCC-CEEEEEecCHHHHHhhhCCEEEEEeCCEEEEecChh
Confidence 999999999999999999999999999999999999986 344 5899999999999987 9999999999999999987
Q ss_pred H
Q 000284 1579 H 1579 (1723)
Q Consensus 1579 ~ 1579 (1723)
.
T Consensus 238 ~ 238 (252)
T CHL00131 238 L 238 (252)
T ss_pred h
Confidence 4
No 475
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=9.7e-39 Score=409.18 Aligned_cols=223 Identities=23% Similarity=0.390 Sum_probs=194.4
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCC--CCCceEEEEc------------
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEE--YPTDGTAFIF------------ 1420 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~--~p~~G~i~i~------------ 1420 (1723)
|+++|++|+|++ +.+++|+||+|++||++||+||||||||||+|+|+|++ +|++|+|.++
T Consensus 1 l~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~ 74 (520)
T TIGR03269 1 IEVKNLTKKFDG------KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVER 74 (520)
T ss_pred CEEEEEEEEECC------eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccccccccc
Confidence 468999999952 46999999999999999999999999999999999997 7999999997
Q ss_pred -----------CeeCC-------C-C---hHHhccceEEEecC-CCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHH
Q 000284 1421 -----------GKDIR-------S-D---PKAARRLIGYCPQF-DALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLV 1477 (1723)
Q Consensus 1421 -----------G~~i~-------~-~---~~~~~~~ig~~pQ~-~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~ 1477 (1723)
|.++. . . ....++.+||+||+ +.+++.+|++||+.+.....+.+..+.++++.++++
T Consensus 75 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~ 154 (520)
T TIGR03269 75 PSKVGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIE 154 (520)
T ss_pred ccccccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 33221 1 1 12346779999997 678888999999987665556655556678889999
Q ss_pred HcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHH
Q 000284 1478 EFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQ 1557 (1723)
Q Consensus 1478 ~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~ 1557 (1723)
.++|.+..++++++|||||||||+||+||+.+|++|||||||+|||+.+++.++++|++++++.| +|||++|||++++.
T Consensus 155 ~~gl~~~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g-~tviivtHd~~~~~ 233 (520)
T TIGR03269 155 MVQLSHRITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASG-ISMVLTSHWPEVIE 233 (520)
T ss_pred HcCChhhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcC-cEEEEEeCCHHHHH
Confidence 99998888999999999999999999999999999999999999999999999999999865444 58999999999999
Q ss_pred HHcCEEEEEECCEEEEecChhHHHhhc
Q 000284 1558 ALCTRIGIMVGGQLRCIGSPQHLKTRF 1584 (1723)
Q Consensus 1558 ~l~drv~im~~G~l~~~g~~~~l~~~~ 1584 (1723)
.+||||++|++|++++.|+++++..++
T Consensus 234 ~~~d~i~~l~~G~i~~~g~~~~~~~~~ 260 (520)
T TIGR03269 234 DLSDKAIWLENGEIKEEGTPDEVVAVF 260 (520)
T ss_pred HhcCEEEEEeCCEEeeecCHHHHHHHH
Confidence 999999999999999999988876543
No 476
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=7.1e-39 Score=365.54 Aligned_cols=206 Identities=32% Similarity=0.511 Sum_probs=175.8
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhcc
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAARR 1433 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~~~ 1433 (1723)
++++|++|.|+++ .+.+++|+||+|++||++||+||||||||||+++|+|+.+|++|+|.++|.++.. .....++
T Consensus 3 l~~~~l~~~~~~~----~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 78 (220)
T cd03245 3 IEFRNVSFSYPNQ----EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRR 78 (220)
T ss_pred EEEEEEEEEcCCC----CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHh
Confidence 7899999999631 2469999999999999999999999999999999999999999999999998754 3344567
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCC-----------CCCCChhHHHHHHH
Q 000284 1434 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKP-----------SFTLSGGNKRKLSV 1502 (1723)
Q Consensus 1434 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~kqrl~i 1502 (1723)
.+||+||++.+++ .|+.||+.+... .. ..+.+.++++.+++.+..++. +.+||||||||++|
T Consensus 79 ~i~~~~q~~~~~~-~tv~e~l~~~~~---~~---~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~l 151 (220)
T cd03245 79 NIGYVPQDVTLFY-GTLRDNITLGAP---LA---DDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVAL 151 (220)
T ss_pred hEEEeCCCCcccc-chHHHHhhcCCC---CC---CHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHH
Confidence 8999999998876 699999876321 11 123455677888887665554 46999999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000284 1503 AIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1575 (1723)
Q Consensus 1503 A~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g 1575 (1723)
||||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++ .+|||+++|++|++++.|
T Consensus 152 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tii~~sH~~~~~-~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 152 ARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLL-G-D-KTLIIITHRPSLL-DLVDRIIVMDSGRIVADG 220 (220)
T ss_pred HHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-C-C-CEEEEEeCCHHHH-HhCCEEEEEeCCeEeecC
Confidence 999999999999999999999999999999999985 3 3 5899999999987 599999999999997654
No 477
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.8e-38 Score=407.31 Aligned_cols=227 Identities=19% Similarity=0.338 Sum_probs=195.3
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCCCC
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIRSD 1427 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p-----~~G~i~i~G~~i~~~ 1427 (1723)
++|+++|++++|+++. +.+.+++|+||+|++||++||+||||||||||+|+|+|+++| ++|+|.++|+++...
T Consensus 4 ~~l~~~~l~~~~~~~~--~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~ 81 (529)
T PRK15134 4 PLLAIENLSVAFRQQQ--TVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHA 81 (529)
T ss_pred ceEEEeceEEEecCCC--CceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccC
Confidence 4799999999996311 124699999999999999999999999999999999999987 799999999998542
Q ss_pred -hH---Hhc-cceEEEecCCC--CCCCCCHHHHHHHHHHH-cCCChhhHHHHHHHHHHHcCCcc---ccCCCCCCCChhH
Q 000284 1428 -PK---AAR-RLIGYCPQFDA--LLEYLTVQEHLELYARI-KGVAEYRMDDVVMEKLVEFDLLK---HAKKPSFTLSGGN 1496 (1723)
Q Consensus 1428 -~~---~~~-~~ig~~pQ~~~--l~~~lTv~e~l~~~~~~-~g~~~~~~~~~~~~~l~~~~l~~---~~~~~~~~LSgG~ 1496 (1723)
.. ..+ ++|||+||++. +++.+|++|++.+.... .+.+..+..+++.++++.++|.+ ..++++.+|||||
T Consensus 82 ~~~~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~LSgGe 161 (529)
T PRK15134 82 SEQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGE 161 (529)
T ss_pred CHHHHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhhCCcccCHHH
Confidence 21 223 57999999964 66778999998765433 35555556677889999999975 3689999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecC
Q 000284 1497 KRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGS 1576 (1723)
Q Consensus 1497 kqrl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~ 1576 (1723)
||||+|||||+.+|++|||||||+|||+.+++.++++|++++++.| .|||++|||++++..+||||++|++|++++.|+
T Consensus 162 ~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g-~tvi~vtHd~~~~~~~~dri~~l~~G~i~~~g~ 240 (529)
T PRK15134 162 RQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELN-MGLLFITHNLSIVRKLADRVAVMQNGRCVEQNR 240 (529)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcC-CeEEEEcCcHHHHHHhcCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999999865434 589999999999999999999999999999999
Q ss_pred hhHHHh
Q 000284 1577 PQHLKT 1582 (1723)
Q Consensus 1577 ~~~l~~ 1582 (1723)
++++.+
T Consensus 241 ~~~~~~ 246 (529)
T PRK15134 241 AATLFS 246 (529)
T ss_pred HHHHhh
Confidence 988753
No 478
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-38 Score=369.53 Aligned_cols=221 Identities=25% Similarity=0.386 Sum_probs=190.8
Q ss_pred cceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCCC
Q 000284 1352 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIRS 1426 (1723)
Q Consensus 1352 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p-----~~G~i~i~G~~i~~ 1426 (1723)
...|+++|++|+|++ +.+++|+||+|++||++||+|+||||||||+++|+|+.+| ++|+|.++|.++..
T Consensus 14 ~~~l~~~~l~~~~~~------~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~ 87 (265)
T PRK14252 14 QQKSEVNKLNFYYGG------YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNI 87 (265)
T ss_pred CceEEEEEEEEEECC------eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCccccc
Confidence 356999999999963 4699999999999999999999999999999999999975 79999999987631
Q ss_pred -----ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChh-hHHHHHHHHHHHcCCc----cccCCCCCCCChhH
Q 000284 1427 -----DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEY-RMDDVVMEKLVEFDLL----KHAKKPSFTLSGGN 1496 (1723)
Q Consensus 1427 -----~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~-~~~~~~~~~l~~~~l~----~~~~~~~~~LSgG~ 1496 (1723)
.....++.+||+||++.+++. |++||+.+.....+.... ..++.+.++++.+++. +..++++.+|||||
T Consensus 88 ~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~ 166 (265)
T PRK14252 88 LSPEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEVKDRLGDLAFNLSGGQ 166 (265)
T ss_pred cccccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhhhHHHhCCcccCCHHH
Confidence 233567789999999988875 999999876554454332 2345677788888763 45688999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecC
Q 000284 1497 KRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGS 1576 (1723)
Q Consensus 1497 kqrl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~ 1576 (1723)
|||++|||||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|++|++++.|+
T Consensus 167 ~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~-~-~-~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~ 243 (265)
T PRK14252 167 QQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLK-N-K-VTILIVTHNMQQAARVSDYTAYMYMGELIEFGA 243 (265)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHH-h-C-CEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 999999999999999999999999999999999999999985 3 3 589999999999999999999999999999999
Q ss_pred hhHHHh
Q 000284 1577 PQHLKT 1582 (1723)
Q Consensus 1577 ~~~l~~ 1582 (1723)
.+++..
T Consensus 244 ~~~~~~ 249 (265)
T PRK14252 244 TDTIFI 249 (265)
T ss_pred HHHHHh
Confidence 988753
No 479
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=1.9e-38 Score=362.90 Aligned_cols=211 Identities=25% Similarity=0.442 Sum_probs=178.6
Q ss_pred eEEEEeEEEEcCCCCccC-ccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEc--Ce--eCCC-C
Q 000284 1354 IIYLRNLRKVYPGGKRSD-AKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIF--GK--DIRS-D 1427 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~-~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~--G~--~i~~-~ 1427 (1723)
+|+++|++|.|+..+..+ .+.+++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++ |. ++.. .
T Consensus 1 ml~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~ 80 (224)
T TIGR02324 1 LLEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQAS 80 (224)
T ss_pred CEEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcC
Confidence 478999999996321101 2469999999999999999999999999999999999999999999998 43 4432 1
Q ss_pred hH---H-hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCcc-ccCCCCCCCChhHHHHHHH
Q 000284 1428 PK---A-ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLK-HAKKPSFTLSGGNKRKLSV 1502 (1723)
Q Consensus 1428 ~~---~-~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG~kqrl~i 1502 (1723)
.. . .++++||+||++.+++.+|++||+.+.....+.......+++.++++.+++.+ ..++++.+||||||||++|
T Consensus 81 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~l 160 (224)
T TIGR02324 81 PREVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLERGVPREAARARARELLARLNIPERLWHLPPATFSGGEQQRVNI 160 (224)
T ss_pred HHHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhhCCcccCCHHHHHHHHH
Confidence 21 1 24579999999999999999999987555445544445567788999999976 4588999999999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEE
Q 000284 1503 AIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIM 1566 (1723)
Q Consensus 1503 A~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im 1566 (1723)
|+||+.+|++|||||||+|||+.+++.+.+.|++++ ++| +|||++||++++++.+|||++.+
T Consensus 161 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~g-~tii~vsH~~~~~~~~~d~i~~~ 222 (224)
T TIGR02324 161 ARGFIADYPILLLDEPTASLDAANRQVVVELIAEAK-ARG-AALIGIFHDEEVRELVADRVMDV 222 (224)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH-hcC-CEEEEEeCCHHHHHHhcceeEec
Confidence 999999999999999999999999999999999985 344 68999999999999999999876
No 480
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-38 Score=373.85 Aligned_cols=217 Identities=21% Similarity=0.344 Sum_probs=185.3
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcc
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKG 527 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ 527 (1723)
..++++||+|.|++ ++.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ...++.
T Consensus 5 ~~l~~~~l~~~~~~---~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~--~~~~~~ 79 (272)
T PRK15056 5 AGIVVNDVTVTWRN---GHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQ--ALQKNL 79 (272)
T ss_pred ceEEEEeEEEEecC---CcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHH--hhccce
Confidence 36999999999952 2469999999999999999999999999999999999999999999999988742 112346
Q ss_pred eEEEccCCCCC--CCCCHHHHHHHHHH----hcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhc
Q 000284 528 LGVCPQYDILF--PELTVREHLEMFAV----LKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIG 601 (1723)
Q Consensus 528 ig~~~Q~~~l~--~~lTv~e~l~~~~~----~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~ 601 (1723)
+||+||++.+. ...+++|++.+... ..+......+++++++++.+||.+..++++.+||||||||++|||||+.
T Consensus 80 i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qrv~laraL~~ 159 (272)
T PRK15056 80 VAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQIGELSGGQKKRVFLARAIAQ 159 (272)
T ss_pred EEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCcccCCHHHHHHHHHHHHHhc
Confidence 99999998652 23478888865311 1111223345678889999999988899999999999999999999999
Q ss_pred CCcEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHH
Q 000284 602 DSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 670 (1723)
Q Consensus 602 ~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~L 670 (1723)
+|+++||||||+|||+.+++.+.++|++++ +|+|||++||+++++..+|||++++ +|+++..|++.++
T Consensus 160 ~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~~g~~~~~ 228 (272)
T PRK15056 160 QGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLASGPTETT 228 (272)
T ss_pred CCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHhc
Confidence 999999999999999999999999999986 5899999999999999999999777 8999999987665
No 481
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=2e-38 Score=362.79 Aligned_cols=207 Identities=24% Similarity=0.419 Sum_probs=180.2
Q ss_pred EEEEeEEEEecCcC--C-ccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcc--c--cCCc-cH
Q 000284 450 IQIRKLHKVYATKR--G-NCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFG--K--NITA-DM 521 (1723)
Q Consensus 450 i~i~~l~k~y~~~~--~-~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g--~--~i~~-~~ 521 (1723)
|+++||+|.|+..+ + ++.+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++| . ++.. +.
T Consensus 2 l~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~~ 81 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQASP 81 (224)
T ss_pred EEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcCH
Confidence 78999999996421 1 24699999999999999999999999999999999999999999999984 3 4422 11
Q ss_pred H---HH-hcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcc-cccccCCCChhHHHHHHHH
Q 000284 522 D---EI-RKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADK-VNIVVRALSGGMKRKLSLG 596 (1723)
Q Consensus 522 ~---~~-r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~-~~~~~~~LSgGqkqrl~lA 596 (1723)
. +. ++.+||+||++.+++.+||.|++.+.....+...+..++++.++++.+|+.+. .++++.+||||||||++||
T Consensus 82 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~la 161 (224)
T TIGR02324 82 REVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLERGVPREAARARARELLARLNIPERLWHLPPATFSGGEQQRVNIA 161 (224)
T ss_pred HHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhhCCcccCCHHHHHHHHHH
Confidence 1 22 46799999999999999999999876554565555567788999999999864 5889999999999999999
Q ss_pred HHHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEE
Q 000284 597 IALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIM 656 (1723)
Q Consensus 597 ~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il 656 (1723)
+||+.+|+++||||||+|||+.+++.+.++|++++ +|+|||++||+++++..+|||++.+
T Consensus 162 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~~ 222 (224)
T TIGR02324 162 RGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMDV 222 (224)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEec
Confidence 99999999999999999999999999999999986 4899999999999999999999876
No 482
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-38 Score=404.70 Aligned_cols=217 Identities=25% Similarity=0.402 Sum_probs=191.7
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC--hHH
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD--PKA 1430 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~--~~~ 1430 (1723)
++|+++|++|.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|+++|.++... ...
T Consensus 3 ~~l~~~~l~~~~~~------~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~ 76 (501)
T PRK11288 3 PYLSFDGIGKTFPG------VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAA 76 (501)
T ss_pred ceEEEeeeEEEECC------EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHH
Confidence 47999999999953 4599999999999999999999999999999999999999999999999998542 234
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHH--HcC-CChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHh
Q 000284 1431 ARRLIGYCPQFDALLEYLTVQEHLELYAR--IKG-VAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMI 1507 (1723)
Q Consensus 1431 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~--~~g-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~ 1507 (1723)
.+++|||+||++.+++.+|++||+.+... ..+ .+..+.++++.++++.+++.+..++++.+|||||||||+||+||+
T Consensus 77 ~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~laral~ 156 (501)
T PRK11288 77 LAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPLKYLSIGQRQMVEIAKALA 156 (501)
T ss_pred HhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCchhhCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999987432 122 233445567888999999988889999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecCh
Q 000284 1508 GDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSP 1577 (1723)
Q Consensus 1508 ~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~ 1577 (1723)
.+|++|||||||+|||+.+++.+++.|++++ ++| +|||++|||++++..+||||++|++|+++..++.
T Consensus 157 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~g-~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~ 224 (501)
T PRK11288 157 RNARVIAFDEPTSSLSAREIEQLFRVIRELR-AEG-RVILYVSHRMEEIFALCDAITVFKDGRYVATFDD 224 (501)
T ss_pred hCCCEEEEcCCCCCCCHHHHHHHHHHHHHHH-hCC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCc
Confidence 9999999999999999999999999999986 444 5899999999999999999999999999877653
No 483
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-38 Score=385.22 Aligned_cols=216 Identities=25% Similarity=0.387 Sum_probs=189.6
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1432 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~ 1432 (1723)
++++++||++.|+++. .+.+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.+.
T Consensus 20 ~mL~lknL~~~~~~~~---~~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~P~sGeI~I~G~~~-------- 88 (549)
T PRK13545 20 PFDKLKDLFFRSKDGE---YHYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTMPNKGTVDIKGSAA-------- 88 (549)
T ss_pred ceeEEEEEEEecCCCc---cceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCCCCceEEEECCEee--------
Confidence 5789999999996531 24699999999999999999999999999999999999999999999999752
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCE
Q 000284 1433 RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPI 1512 (1723)
Q Consensus 1433 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~v 1512 (1723)
++++...+.+.+|++||+.+.....+.+..+..+.+.++++.+++.+..++++++||||||||++|||||+.+|++
T Consensus 89 ----~i~~~~~l~~~lTV~EnL~l~~~~~~~~~~e~~e~i~elLe~lgL~~~ld~~~~~LSGGQrQRVaLArAL~~~P~L 164 (549)
T PRK13545 89 ----LIAISSGLNGQLTGIENIELKGLMMGLTKEKIKEIIPEIIEFADIGKFIYQPVKTYSSGMKSRLGFAISVHINPDI 164 (549)
T ss_pred ----eEEeccccCCCCcHHHHHHhhhhhcCCCHHHHHHHHHHHHHHcCChhHhhCCcccCCHHHHHHHHHHHHHHhCCCE
Confidence 1223345667789999998866555665555566778899999999889999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhcC
Q 000284 1513 VILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFG 1585 (1723)
Q Consensus 1513 llLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~~~ 1585 (1723)
|||||||+|||+.+++.+++.|++++ ++| +|||++||++++++.+|||+++|++|++++.|+++++..++.
T Consensus 165 LLLDEPTsgLD~~sr~~LlelL~el~-~~G-~TIIIVSHdl~~i~~l~DrIivL~~GkIv~~G~~~el~~~~~ 235 (549)
T PRK13545 165 LVIDEALSVGDQTFTKKCLDKMNEFK-EQG-KTIFFISHSLSQVKSFCTKALWLHYGQVKEYGDIKEVVDHYD 235 (549)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHH-hCC-CEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHHhhHH
Confidence 99999999999999999999999985 444 589999999999999999999999999999999998877654
No 484
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.2e-39 Score=389.67 Aligned_cols=218 Identities=30% Similarity=0.506 Sum_probs=192.4
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhcc
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 527 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 527 (1723)
.++.+||++.|+.+ +++++|+||++++|+.++|+|+||||||||+++|+|+.+|++|+|.+||.+.+. +....|++
T Consensus 320 ei~~~~l~~~y~~g---~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~ 396 (559)
T COG4988 320 EISLENLSFRYPDG---KPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQ 396 (559)
T ss_pred eeeecceEEecCCC---CcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhH
Confidence 45556999999753 379999999999999999999999999999999999999999999999999865 66788999
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCccc------cccc----CCCChhHHHHHHHHH
Q 000284 528 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKV------NIVV----RALSGGMKRKLSLGI 597 (1723)
Q Consensus 528 ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~------~~~~----~~LSgGqkqrl~lA~ 597 (1723)
+++++|+|.+|+. |++||+.++.. +..++++.++++..|+.+.. |..+ ..|||||+|||++||
T Consensus 397 i~~v~Q~p~lf~g-TireNi~l~~~------~~s~e~i~~al~~a~l~~~v~~p~GLdt~ige~G~~LSgGQ~QRlaLAR 469 (559)
T COG4988 397 ISWVSQNPYLFAG-TIRENILLARP------DASDEEIIAALDQAGLLEFVPKPDGLDTVIGEGGAGLSGGQAQRLALAR 469 (559)
T ss_pred eeeeCCCCccccc-cHHHHhhccCC------cCCHHHHHHHHHHhcHHHhhcCCCcccchhccCCCCCCHHHHHHHHHHH
Confidence 9999999999987 99999998631 22346677777777765433 3333 359999999999999
Q ss_pred HHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhhhCCc
Q 000284 598 ALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGVG 677 (1723)
Q Consensus 598 al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~g~g 677 (1723)
||+.+++++|||||||+||.++.+.+.+.|.++.+++|+|++||++..+.. +|||++|++|+++|.|++.+|.++-|..
T Consensus 470 All~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~-~D~I~vld~G~l~~~g~~~~L~~~~~~y 548 (559)
T COG4988 470 ALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAAD-ADRIVVLDNGRLVEQGTHEELSEKQGLY 548 (559)
T ss_pred HhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhc-CCEEEEecCCceeccCCHHHHhhcCcHH
Confidence 999999999999999999999999999999999999999999999999976 9999999999999999999997765543
No 485
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-38 Score=374.06 Aligned_cols=222 Identities=23% Similarity=0.396 Sum_probs=190.1
Q ss_pred CcceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeCC
Q 000284 1351 DNAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDIR 1425 (1723)
Q Consensus 1351 ~~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~-----p~~G~i~i~G~~i~ 1425 (1723)
.+.+|+++||+++|++ +.+|+++||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 42 ~~~~l~i~nl~~~~~~------~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~ 115 (305)
T PRK14264 42 GDAKLSVEDLDVYYGD------DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIY 115 (305)
T ss_pred CCceEEEEEEEEEeCC------eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcc
Confidence 4568999999999963 459999999999999999999999999999999999986 68999999999885
Q ss_pred C---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHc------------CCCh-hhHHHHHHHHHHHcCCc----ccc
Q 000284 1426 S---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIK------------GVAE-YRMDDVVMEKLVEFDLL----KHA 1485 (1723)
Q Consensus 1426 ~---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~------------g~~~-~~~~~~~~~~l~~~~l~----~~~ 1485 (1723)
. .....++++||+||++.+++ .|++||+.+..... +... ...++.+.++++.+++. +..
T Consensus 116 ~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 194 (305)
T PRK14264 116 QDGVNLVELRKRVGMVFQSPNPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEVNDRL 194 (305)
T ss_pred cccccHHHHhhceEEEccCCcccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhhhHHh
Confidence 3 23456778999999988887 59999998754322 1111 22345677888888874 456
Q ss_pred CCCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEE-E
Q 000284 1486 KKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRI-G 1564 (1723)
Q Consensus 1486 ~~~~~~LSgG~kqrl~iA~al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv-~ 1564 (1723)
++++.+||||||||++||+||+.+|+||||||||+|||+.+++.++++|+++++ + .|||++||+++++..+|||+ +
T Consensus 195 ~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~--~-~tiiivtH~~~~i~~~~d~i~~ 271 (305)
T PRK14264 195 DDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAE--E-YTVVVVTHNMQQAARISDQTAV 271 (305)
T ss_pred cCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEEcCHHHHHHhcCEEEE
Confidence 889999999999999999999999999999999999999999999999999853 3 58999999999999999997 4
Q ss_pred EEECCEEEEecChhHHHh
Q 000284 1565 IMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1565 im~~G~l~~~g~~~~l~~ 1582 (1723)
+|++|++++.|+++++.+
T Consensus 272 ~l~~G~i~~~g~~~~~~~ 289 (305)
T PRK14264 272 FLTGGELVEYDDTDKIFE 289 (305)
T ss_pred EecCCEEEEeCCHHHHHh
Confidence 679999999999988754
No 486
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=2.4e-38 Score=366.98 Aligned_cols=204 Identities=25% Similarity=0.451 Sum_probs=178.9
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1432 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~ 1432 (1723)
++|+++||+|.|++ +.+++++||+|++||++||+||||||||||+++|+|+++|++|+|.++| +
T Consensus 3 ~~l~~~~l~~~~~~------~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~----------~ 66 (251)
T PRK09544 3 SLVSLENVSVSFGQ------RRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNG----------K 66 (251)
T ss_pred cEEEEeceEEEECC------ceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECC----------c
Confidence 37899999999963 4599999999999999999999999999999999999999999999986 2
Q ss_pred cceEEEecCCCCCCC--CCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000284 1433 RLIGYCPQFDALLEY--LTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1510 (1723)
Q Consensus 1433 ~~ig~~pQ~~~l~~~--lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p 1510 (1723)
..+||+||++.+++. .|+.+++.+. .+.. .+++.++++.+++.+..++++.+|||||||||+||+||+.+|
T Consensus 67 ~~i~~v~q~~~~~~~l~~~~~~~~~~~---~~~~----~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrv~laral~~~p 139 (251)
T PRK09544 67 LRIGYVPQKLYLDTTLPLTVNRFLRLR---PGTK----KEDILPALKRVQAGHLIDAPMQKLSGGETQRVLLARALLNRP 139 (251)
T ss_pred cCEEEeccccccccccChhHHHHHhcc---cccc----HHHHHHHHHHcCChHHHhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 369999999877765 3777776432 1221 245678899999998899999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000284 1511 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1581 (1723)
Q Consensus 1511 ~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~ 1581 (1723)
++|||||||+|||+.+++.+++.|++++++.| +|||++||+++++..+||||++|+ |++++.|+++++.
T Consensus 140 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g-~tiiivsH~~~~i~~~~d~i~~l~-~~i~~~g~~~~~~ 208 (251)
T PRK09544 140 QLLVLDEPTQGVDVNGQVALYDLIDQLRRELD-CAVLMVSHDLHLVMAKTDEVLCLN-HHICCSGTPEVVS 208 (251)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEEEEEC-CceEeeCCHHHHh
Confidence 99999999999999999999999999864434 589999999999999999999996 5799999988774
No 487
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=1.1e-38 Score=358.46 Aligned_cols=197 Identities=27% Similarity=0.360 Sum_probs=178.4
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcceE
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 529 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 529 (1723)
++++||++.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.......++++|
T Consensus 1 l~i~~l~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 76 (201)
T cd03231 1 LEADELTCERDG----RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQRDSIARGLL 76 (201)
T ss_pred CEEEEEEEEeCC----ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccccHHhhhheE
Confidence 468999999953 4699999999999999999999999999999999999999999999999987544456778999
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEeecc
Q 000284 530 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 609 (1723)
Q Consensus 530 ~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 609 (1723)
|+||++.+++.+|++||+.++... ..+++++++++.+|+.+..++++.+||||||||++|||||+.+|+++|||
T Consensus 77 ~~~q~~~~~~~~tv~e~l~~~~~~------~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~llllD 150 (201)
T cd03231 77 YLGHAPGIKTTLSVLENLRFWHAD------HSDEQVEEALARVGLNGFEDRPVAQLSAGQQRRVALARLLLSGRPLWILD 150 (201)
T ss_pred EeccccccCCCcCHHHHHHhhccc------ccHHHHHHHHHHcCChhhhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999999999899999999875321 12457889999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEE
Q 000284 610 EPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIM 656 (1723)
Q Consensus 610 EPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il 656 (1723)
|||+|||+.++++++++|++++ +|+|+|++||+.++....|||++.+
T Consensus 151 EPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 151 EPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 9999999999999999999885 5899999999999999999999876
No 488
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=5.7e-37 Score=393.66 Aligned_cols=223 Identities=24% Similarity=0.403 Sum_probs=188.3
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHh
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAA 1431 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~ 1431 (1723)
..++++|++++|+.. +..+|+|+||+|++||.+||+|+||||||||+|+|+|+++|++|+|.+||.|+.. +...+
T Consensus 470 g~I~~~nvsf~y~~~----~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~l 545 (709)
T COG2274 470 GEIEFENVSFRYGPD----DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASL 545 (709)
T ss_pred ceEEEEEEEEEeCCC----CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHH
Confidence 359999999999753 3469999999999999999999999999999999999999999999999999977 77889
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHH-----HHHHHHHc--CCccccCCCCCCCChhHHHHHHHHH
Q 000284 1432 RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDV-----VMEKLVEF--DLLKHAKKPSFTLSGGNKRKLSVAI 1504 (1723)
Q Consensus 1432 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LSgG~kqrl~iA~ 1504 (1723)
|++||||||++.+|. -|++||+.+... ..+.+++.+. +.+.+..+ |...........||||||||++|||
T Consensus 546 R~~ig~V~Q~~~Lf~-gSI~eNi~l~~p--~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalAR 622 (709)
T COG2274 546 RRQVGYVLQDPFLFS-GSIRENIALGNP--EATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALAR 622 (709)
T ss_pred HhheeEEcccchhhc-CcHHHHHhcCCC--CCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHHHH
Confidence 999999999999886 599999987432 1221222111 11223322 3334445677889999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhc
Q 000284 1505 AMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRF 1584 (1723)
Q Consensus 1505 al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~~~ 1584 (1723)
||+++|+|||||||||+||+.+.+.+.+.|.++. +| +|+|++||++..+.. ||||++|++|+++++|+.+++.++.
T Consensus 623 aLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~--~~-~T~I~IaHRl~ti~~-adrIiVl~~Gkiv~~gs~~ell~~~ 698 (709)
T COG2274 623 ALLSKPKILLLDEATSALDPETEAIILQNLLQIL--QG-RTVIIIAHRLSTIRS-ADRIIVLDQGKIVEQGSHEELLAQG 698 (709)
T ss_pred HhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh--cC-CeEEEEEccchHhhh-ccEEEEccCCceeccCCHHHHHHhc
Confidence 9999999999999999999999999999999984 34 689999999998875 9999999999999999999999885
Q ss_pred CC
Q 000284 1585 GN 1586 (1723)
Q Consensus 1585 ~~ 1586 (1723)
|.
T Consensus 699 g~ 700 (709)
T COG2274 699 GL 700 (709)
T ss_pred Ch
Confidence 43
No 489
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=7.2e-39 Score=366.97 Aligned_cols=209 Identities=24% Similarity=0.420 Sum_probs=181.1
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhc
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRK 526 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~ 526 (1723)
..++++|+++.|+++. ++.+++++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .....++
T Consensus 10 ~~l~~~~l~~~~~~~~-~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 88 (226)
T cd03248 10 GIVKFQNVTFAYPTRP-DTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHS 88 (226)
T ss_pred ceEEEEEEEEEeCCCC-CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHHh
Confidence 5799999999996532 2469999999999999999999999999999999999999999999999998753 3345677
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CCCcccccccCCCChhHHHHHHHHHHH
Q 000284 527 GLGVCPQYDILFPELTVREHLEMFAVLKGVKEELL-----ESVVAEMVDEV--GLADKVNIVVRALSGGMKRKLSLGIAL 599 (1723)
Q Consensus 527 ~ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~-----~~~v~~~l~~~--~l~~~~~~~~~~LSgGqkqrl~lA~al 599 (1723)
.+|||||++.+++ .|++||+.+.... ....+. +..++++++.+ |+.+..++++.+||||||||++||+||
T Consensus 89 ~i~~~~q~~~l~~-~tv~~nl~~~~~~--~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral 165 (226)
T cd03248 89 KVSLVGQEPVLFA-RSLQDNIAYGLQS--CSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARAL 165 (226)
T ss_pred hEEEEecccHHHh-hhHHHHhccccCC--CCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHH
Confidence 8999999998886 5999999864321 111111 12356788888 788888999999999999999999999
Q ss_pred hcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEE
Q 000284 600 IGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSL 661 (1723)
Q Consensus 600 ~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l 661 (1723)
+.+|+++||||||+|||+.+++.++++|+++++++|||++||++++++. ||||++|++|++
T Consensus 166 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~-~d~i~~l~~g~i 226 (226)
T cd03248 166 IRNPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVER-ADQILVLDGGRI 226 (226)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHh-CCEEEEecCCcC
Confidence 9999999999999999999999999999998777999999999999975 999999999974
No 490
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-38 Score=336.42 Aligned_cols=227 Identities=28% Similarity=0.410 Sum_probs=198.0
Q ss_pred eEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhcc
Q 000284 449 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 527 (1723)
Q Consensus 449 ~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 527 (1723)
+|+.+||+.+-.+ +..++++||++++||+.+|+|||||||||||+.|+|.+.|++|++.++|.++.. ...+..++
T Consensus 1 mi~a~nls~~~~G----r~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA~~ 76 (259)
T COG4559 1 MIRAENLSYSLAG----RRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELARH 76 (259)
T ss_pred CeeeeeeEEEeec----ceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHHHH
Confidence 4788999988854 469999999999999999999999999999999999999999999999999864 45566677
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhc----
Q 000284 528 LGVCPQYDILFPELTVREHLEMFAVLKGV--KEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIG---- 601 (1723)
Q Consensus 528 ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~--~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~---- 601 (1723)
-++.||+..+-...||.|-+.++..-.+. ...+.++.++++|..+++.....+...+|||||||||.+||.|+.
T Consensus 77 raVlpQ~s~laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la~R~y~~LSGGEqQRVqlARvLaQl~~~ 156 (259)
T COG4559 77 RAVLPQNSSLAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDLSGLAGRDYRTLSGGEQQRVQLARVLAQLWPP 156 (259)
T ss_pred hhhcccCcccccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcChhhhhccchhhcCchHHHHHHHHHHHHHccCC
Confidence 89999999874456999999998654432 323445568899999999999999999999999999999999975
Q ss_pred --CCcEeeccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHH------HHh
Q 000284 602 --DSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLF------LKH 672 (1723)
Q Consensus 602 --~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~------Lk~ 672 (1723)
++++|+||||||+||......+.++.+++. +|..|+.+-||++.+..+||||++|++||++++|+|++ |.+
T Consensus 157 v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~Grv~a~g~p~~vlt~Etl~~ 236 (259)
T COG4559 157 VPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQGRVIASGSPQDVLTDETLER 236 (259)
T ss_pred CCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeCCeEeecCCHHHhcCHHHHHH
Confidence 557999999999999999999999999985 68899999999999999999999999999999999864 556
Q ss_pred hhCCcEE
Q 000284 673 QYGVGYT 679 (1723)
Q Consensus 673 ~~g~gy~ 679 (1723)
-||..-.
T Consensus 237 vyg~~~~ 243 (259)
T COG4559 237 VYGADIR 243 (259)
T ss_pred HhCCcee
Confidence 6765443
No 491
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.1e-38 Score=364.28 Aligned_cols=206 Identities=25% Similarity=0.427 Sum_probs=178.6
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhcce
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKGL 528 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~i 528 (1723)
++++|+++.|+.. .+.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. .....++.+
T Consensus 3 l~~~~l~~~~~~~--~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 3 IEFKNVSLRYRPN--LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred EEEEEEEEecCCC--CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 7899999999642 2469999999999999999999999999999999999999999999999998753 445567889
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcc-----------cccccCCCChhHHHHHHHHH
Q 000284 529 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADK-----------VNIVVRALSGGMKRKLSLGI 597 (1723)
Q Consensus 529 g~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~-----------~~~~~~~LSgGqkqrl~lA~ 597 (1723)
||+||++.+++ .|++||+.++.. .. .+++.+.++.+++.+. .++.+.+||||||||++|||
T Consensus 81 ~~~~q~~~l~~-~tv~enl~~~~~---~~----~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~lar 152 (221)
T cd03244 81 SIIPQDPVLFS-GTIRSNLDPFGE---YS----DEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLAR 152 (221)
T ss_pred EEECCCCcccc-chHHHHhCcCCC---CC----HHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHH
Confidence 99999998876 599999975421 22 2345555666655443 35688999999999999999
Q ss_pred HHhcCCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecC
Q 000284 598 ALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGS 666 (1723)
Q Consensus 598 al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs 666 (1723)
||+.+|+++||||||+|||+.+++.++++|+++++++|||++||+++++.. |||+++|++|+++..|+
T Consensus 153 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~-~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 153 ALLRKSKILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIID-SDRILVLDKGRVVEFDS 220 (221)
T ss_pred HHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhh-CCEEEEEECCeEEecCC
Confidence 999999999999999999999999999999998778999999999999986 99999999999988775
No 492
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-38 Score=365.65 Aligned_cols=216 Identities=23% Similarity=0.397 Sum_probs=182.9
Q ss_pred EEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCc-cHHHHhcce
Q 000284 450 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKGL 528 (1723)
Q Consensus 450 i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~i 528 (1723)
++++|+++.|++ .+.+++|+||+|++||+++|+|+||||||||+++|+|+.+|++|+|.++|.++.. +....|+.+
T Consensus 1 l~~~~l~~~~~~---~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i 77 (236)
T cd03253 1 IEFENVTFAYDP---GRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAI 77 (236)
T ss_pred CEEEEEEEEeCC---CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhE
Confidence 468999999953 2359999999999999999999999999999999999999999999999998753 445567889
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCCcccccccCCCChhHHHHHHHHHHHhc
Q 000284 529 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLES-----VVAEMVDEV--GLADKVNIVVRALSGGMKRKLSLGIALIG 601 (1723)
Q Consensus 529 g~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~-----~v~~~l~~~--~l~~~~~~~~~~LSgGqkqrl~lA~al~~ 601 (1723)
||+||++.+++ .|+.||+.+.... .+.....+ .+.+.++.+ ++....++++.+||||||||++||+||+.
T Consensus 78 ~~~~q~~~~~~-~tv~~nl~~~~~~--~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~ 154 (236)
T cd03253 78 GVVPQDTVLFN-DTIGYNIRYGRPD--ATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILK 154 (236)
T ss_pred EEECCCChhhc-chHHHHHhhcCCC--CCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 99999998886 6999999875321 12222111 123344444 55556677889999999999999999999
Q ss_pred CCcEeeccCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000284 602 DSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 672 (1723)
Q Consensus 602 ~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~ 672 (1723)
+|+++||||||+|||+.+++.++++|+++++|+|||++||+++++.. |||+++|++|+++..|+..++..
T Consensus 155 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~-~d~~~~l~~g~i~~~~~~~~~~~ 224 (236)
T cd03253 155 NPPILLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVN-ADKIIVLKDGRIVERGTHEELLA 224 (236)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHh-CCEEEEEECCEEEeeCCHHHHhh
Confidence 99999999999999999999999999998778999999999999975 99999999999999999877765
No 493
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-38 Score=385.05 Aligned_cols=217 Identities=27% Similarity=0.384 Sum_probs=196.4
Q ss_pred cceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChH-
Q 000284 1352 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPK- 1429 (1723)
Q Consensus 1352 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~- 1429 (1723)
.+.++++|++|+|++ .+||+++||+|++|||+||+|.||||||||+|+|+|.++|++|+|.++|+.+.. .+.
T Consensus 6 ~~ll~~~~i~K~Fgg------V~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~ 79 (500)
T COG1129 6 PPLLELRGISKSFGG------VKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRD 79 (500)
T ss_pred cceeeeecceEEcCC------ceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHH
Confidence 357999999999964 679999999999999999999999999999999999999999999999998863 444
Q ss_pred HhccceEEEecCCCCCCCCCHHHHHHHHHHHc----CCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHH
Q 000284 1430 AARRLIGYCPQFDALLEYLTVQEHLELYARIK----GVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIA 1505 (1723)
Q Consensus 1430 ~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~----g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~a 1505 (1723)
.....|+.+.|+.+|.|+|||.||+.+..... -++++...+++.++|+++++....+.++++||+||||-|.||||
T Consensus 80 A~~~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v~~LsiaqrQ~VeIArA 159 (500)
T COG1129 80 ALAAGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLVGDLSIAQRQMVEIARA 159 (500)
T ss_pred HHhCCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhhhhCCHHHHHHHHHHHH
Confidence 45567999999999999999999997654322 25667788889999999999655999999999999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecC
Q 000284 1506 MIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGS 1576 (1723)
Q Consensus 1506 l~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~ 1576 (1723)
|..+++||||||||+.|++...+.+.++|++++ ++| .+||++||.|+|+.++||||.||.+|+.++.++
T Consensus 160 l~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk-~~G-v~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~ 228 (500)
T COG1129 160 LSFDARVLILDEPTAALTVKETERLFDLIRRLK-AQG-VAIIYISHRLDEVFEIADRITVLRDGRVVGTRP 228 (500)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH-hCC-CEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecc
Confidence 999999999999999999999999999999996 455 689999999999999999999999999998877
No 494
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=2.3e-38 Score=404.08 Aligned_cols=219 Identities=26% Similarity=0.424 Sum_probs=190.9
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC--CceEEEEcCeeCCCC-hH-
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP--TDGTAFIFGKDIRSD-PK- 1429 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p--~~G~i~i~G~~i~~~-~~- 1429 (1723)
+|+++||+|.|++ +.+++|+||++++||++||+||||||||||+++|+|+++| ++|+|.++|+++... ..
T Consensus 1 ~l~i~~l~~~~~~------~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~ 74 (500)
T TIGR02633 1 LLEMKGIVKTFGG------VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRD 74 (500)
T ss_pred CEEEEeEEEEeCC------eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHH
Confidence 3789999999953 4599999999999999999999999999999999999987 799999999998652 22
Q ss_pred HhccceEEEecCCCCCCCCCHHHHHHHHHHHc--C--CChhhHHHHHHHHHHHcCCcccc-CCCCCCCChhHHHHHHHHH
Q 000284 1430 AARRLIGYCPQFDALLEYLTVQEHLELYARIK--G--VAEYRMDDVVMEKLVEFDLLKHA-KKPSFTLSGGNKRKLSVAI 1504 (1723)
Q Consensus 1430 ~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~--g--~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~kqrl~iA~ 1504 (1723)
..+++|||+||++.+++.+|++||+.+..... + ...++..+++.++++.+++.+.. ++++++|||||||||+||+
T Consensus 75 ~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~iA~ 154 (500)
T TIGR02633 75 TERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRPVGDYGGGQQQLVEIAK 154 (500)
T ss_pred HHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCchhhCCHHHHHHHHHHH
Confidence 24567999999998999999999998754322 1 23334456788899999998654 6789999999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000284 1505 AMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1580 (1723)
Q Consensus 1505 al~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l 1580 (1723)
||+.+|++|||||||+|||+.+++.+++.|++++ ++| +|||++|||++++..+||||++|++|+++..|+++++
T Consensus 155 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~-~~g-~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (500)
T TIGR02633 155 ALNKQARLLILDEPSSSLTEKETEILLDIIRDLK-AHG-VACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTM 228 (500)
T ss_pred HHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHH-hCC-CEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccC
Confidence 9999999999999999999999999999999986 444 5899999999999999999999999999999887653
No 495
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-38 Score=404.08 Aligned_cols=216 Identities=25% Similarity=0.359 Sum_probs=189.8
Q ss_pred EEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC--hHHhccc
Q 000284 1357 LRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD--PKAARRL 1434 (1723)
Q Consensus 1357 v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~--~~~~~~~ 1434 (1723)
++|++|+|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++... ....+++
T Consensus 1 ~~nl~~~~~~------~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~ 74 (491)
T PRK10982 1 MSNISKSFPG------VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENG 74 (491)
T ss_pred CCceEEEeCC------EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCC
Confidence 3689999953 4699999999999999999999999999999999999999999999999998642 2334678
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHH-HcCC--ChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000284 1435 IGYCPQFDALLEYLTVQEHLELYAR-IKGV--AEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1511 (1723)
Q Consensus 1435 ig~~pQ~~~l~~~lTv~e~l~~~~~-~~g~--~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~ 1511 (1723)
+||+||++.+++.+||+||+.+... ..+. +..+..+++.++++.+++....++++.+|||||||||+||+||+.+|+
T Consensus 75 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~lA~al~~~p~ 154 (491)
T PRK10982 75 ISMVHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKVATLSVSQMQMIEIAKAFSYNAK 154 (491)
T ss_pred EEEEecccccccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCchhhCCHHHHHHHHHHHHHHhCCC
Confidence 9999999988889999999976432 1221 233345678889999999888899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000284 1512 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1580 (1723)
Q Consensus 1512 vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l 1580 (1723)
+|||||||+|||+.+++.+++.|++++ +.| .|||++|||++++..+|||+++|++|+++..|+++++
T Consensus 155 lllLDEPt~~LD~~~~~~l~~~l~~l~-~~g-~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 221 (491)
T PRK10982 155 IVIMDEPTSSLTEKEVNHLFTIIRKLK-ERG-CGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGL 221 (491)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHH-hCC-CEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhC
Confidence 999999999999999999999999986 444 5899999999999999999999999999999987664
No 496
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.9e-38 Score=358.86 Aligned_cols=192 Identities=28% Similarity=0.385 Sum_probs=157.4
Q ss_pred ceEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000284 1353 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1432 (1723)
Q Consensus 1353 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~ 1432 (1723)
+++-+.++++.|++ .++.+++++|.|.--..++|+||||.|||||+++|.|-+.|+.|+.+- ..|
T Consensus 585 PvLGlH~VtFgy~g-----qkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P~~GE~RK----------nhr 649 (807)
T KOG0066|consen 585 PVLGLHDVTFGYPG-----QKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDPNDGELRK----------NHR 649 (807)
T ss_pred CeeecccccccCCC-----CCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCCCcchhhc----------cce
Confidence 57889999999974 567899999999999999999999999999999999999999998532 235
Q ss_pred cceEEEecCC--CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccC-CCCCCCChhHHHHHHHHHHHhcC
Q 000284 1433 RLIGYCPQFD--ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAK-KPSFTLSGGNKRKLSVAIAMIGD 1509 (1723)
Q Consensus 1433 ~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~LSgG~kqrl~iA~al~~~ 1509 (1723)
-+||+.-|+. +|-...|..|.| .+...++.. .++..|..+||..+++ -++..||||||-||++|-.-++.
T Consensus 650 L~iG~FdQh~~E~L~~Eetp~EyL---qr~FNlpyq----~ARK~LG~fGL~sHAHTikikdLSGGQKaRValaeLal~~ 722 (807)
T KOG0066|consen 650 LRIGWFDQHANEALNGEETPVEYL---QRKFNLPYQ----EARKQLGTFGLASHAHTIKIKDLSGGQKARVALAELALGG 722 (807)
T ss_pred eeeechhhhhHHhhccccCHHHHH---HHhcCCChH----HHHHHhhhhhhhhccceEeeeecCCcchHHHHHHHHhcCC
Confidence 5799999974 455556766655 344456543 3557799999987776 57899999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEE
Q 000284 1510 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQL 1571 (1723)
Q Consensus 1510 p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l 1571 (1723)
|+||||||||+.||..+...+-++|.++. | .||++|||-..+..---.++|+.+..|
T Consensus 723 PDvlILDEPTNNLDIESIDALaEAIney~---G--gVi~VsHDeRLi~eT~C~LwVvE~Q~i 779 (807)
T KOG0066|consen 723 PDVLILDEPTNNLDIESIDALAEAINEYN---G--GVIMVSHDERLIVETDCNLWVVENQGI 779 (807)
T ss_pred CCEEEecCCCCCcchhhHHHHHHHHHhcc---C--cEEEEecccceeeecCceEEEEccCCh
Confidence 99999999999999999999999999972 3 599999997776554334556555433
No 497
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=2.2e-38 Score=356.07 Aligned_cols=198 Identities=26% Similarity=0.373 Sum_probs=176.9
Q ss_pred EEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000284 1355 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1434 (1723)
Q Consensus 1355 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~~ 1434 (1723)
|+++||++.|++ +.+++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.......+++
T Consensus 1 l~i~~l~~~~~~------~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 74 (201)
T cd03231 1 LEADELTCERDG------RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQRDSIARG 74 (201)
T ss_pred CEEEEEEEEeCC------ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccccHHhhhh
Confidence 468999999953 46899999999999999999999999999999999999999999999999876544556788
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000284 1435 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1514 (1723)
Q Consensus 1435 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vll 1514 (1723)
+||+||++.+++.+|++||+.++.... .++++.++++.+++.+..++++.+||||||||++|||||+.+|++||
T Consensus 75 i~~~~q~~~~~~~~tv~e~l~~~~~~~------~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~lll 148 (201)
T cd03231 75 LLYLGHAPGIKTTLSVLENLRFWHADH------SDEQVEEALARVGLNGFEDRPVAQLSAGQQRRVALARLLLSGRPLWI 148 (201)
T ss_pred eEEeccccccCCCcCHHHHHHhhcccc------cHHHHHHHHHHcCChhhhcCchhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999999998888899999998753211 23567788999999888899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEE
Q 000284 1515 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIM 1566 (1723)
Q Consensus 1515 LDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im 1566 (1723)
|||||+|||+.+++.+++.|+++++ +| .|||++||+.++....|+|++.+
T Consensus 149 lDEPt~~LD~~~~~~l~~~l~~~~~-~g-~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 149 LDEPTTALDKAGVARFAEAMAGHCA-RG-GMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred EeCCCCCCCHHHHHHHHHHHHHHHh-CC-CEEEEEecCchhhhhccceeEec
Confidence 9999999999999999999999853 44 58999999999999999999876
No 498
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-39 Score=340.23 Aligned_cols=222 Identities=24% Similarity=0.353 Sum_probs=205.0
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhc
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAAR 1432 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i~~-~~~~~~ 1432 (1723)
|++++|++|+|+ .+.+++++|++|++|.+++|+||||||||||+.|++.++++++|+|+++|.++.. +.+.+.
T Consensus 1 MI~i~nv~K~y~------~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~d~G~i~i~g~~~~~~~s~~LA 74 (252)
T COG4604 1 MITIENVSKSYG------TKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKKDSGEITIDGLELTSTPSKELA 74 (252)
T ss_pred CeeehhhhHhhC------CEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhccccCceEEEeeeecccCChHHHH
Confidence 578999999995 4789999999999999999999999999999999999999999999999999976 566778
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHH--HHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000284 1433 RLIGYCPQFDALLEYLTVQEHLELYA--RIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1510 (1723)
Q Consensus 1433 ~~ig~~pQ~~~l~~~lTv~e~l~~~~--~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~al~~~p 1510 (1723)
++++.+-|+..+-..+||+|-+.|.. ..+|....+.+..++++++.++|++..++...+||||||||.-||+.++++.
T Consensus 75 k~lSILkQ~N~i~~rlTV~dLv~FGRfPYSqGRlt~eD~~~I~~aieyl~L~~l~dryLd~LSGGQrQRAfIAMVlaQdT 154 (252)
T COG4604 75 KKLSILKQENHINSRLTVRDLVGFGRFPYSQGRLTKEDRRIINEAIEYLHLEDLSDRYLDELSGGQRQRAFIAMVLAQDT 154 (252)
T ss_pred HHHHHHHhhchhhheeEHHHHhhcCCCcccCCCCchHHHHHHHHHHHHhcccchHHHhHHhcccchhhhhhhheeeeccC
Confidence 88999999999888999999887632 2346666777888999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000284 1511 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1582 (1723)
Q Consensus 1511 ~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l~~ 1582 (1723)
+.++||||.++||.+....+++.+++++++-| +||+++-||.+++..++|.|+-|++|+++..|+|+++.+
T Consensus 155 dyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~-KtiviVlHDINfAS~YsD~IVAlK~G~vv~~G~~~eii~ 225 (252)
T COG4604 155 DYVLLDEPLNNLDMKHSVQIMKILRRLADELG-KTIVVVLHDINFASCYSDHIVALKNGKVVKQGSPDEIIQ 225 (252)
T ss_pred cEEEecCcccccchHHHHHHHHHHHHHHHHhC-CeEEEEEecccHHHhhhhheeeecCCEEEecCCHHHhcC
Confidence 99999999999999999999999999987776 589999999999999999999999999999999998764
No 499
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.9e-39 Score=322.34 Aligned_cols=219 Identities=26% Similarity=0.410 Sum_probs=200.5
Q ss_pred eEEEEeEEEEcCCCCccCccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeC--CCC----
Q 000284 1354 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDI--RSD---- 1427 (1723)
Q Consensus 1354 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Ge~~gllG~NGaGKSTll~~l~G~~~p~~G~i~i~G~~i--~~~---- 1427 (1723)
.|+++|+.+.||. ..+|-||+|+.++||.+.|+||+|||||||+|.|.=+..|.+|+..|.|... .+.
T Consensus 2 sirv~~in~~yg~------~q~lfdi~l~~~~getlvllgpsgagkssllr~lnlle~p~sg~l~ia~~~fd~s~~~~~k 75 (242)
T COG4161 2 SIQLNGINCFYGA------HQALFDITLDCPEGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDK 75 (242)
T ss_pred ceEEccccccccc------chheeeeeecCCCCCEEEEECCCCCchHHHHHHHHHHhCCCCCeEEecccccccccCccHH
Confidence 4789999999963 5699999999999999999999999999999999999999999999987643 322
Q ss_pred -hHHhccceEEEecCCCCCCCCCHHHHHHH-HHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHH
Q 000284 1428 -PKAARRLIGYCPQFDALLEYLTVQEHLEL-YARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIA 1505 (1723)
Q Consensus 1428 -~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~-~~~~~g~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrl~iA~a 1505 (1723)
..++|+.+|+|+|...|||.+||.|||.- ..+..|+++++.+.++.++|+++.|.+++|+.+-.|||||+|||+||||
T Consensus 76 ~i~~lr~~vgmvfqqy~lwphltv~enlieap~kv~gl~~~qa~~~a~ellkrlrl~~~adr~plhlsggqqqrvaiara 155 (242)
T COG4161 76 AIRDLRRNVGMVFQQYNLWPHLTVQENLIEAPCRVLGLSKDQALARAEKLLKRLRLKPYADRYPLHLSGGQQQRVAIARA 155 (242)
T ss_pred HHHHHHHhhhhhhhhhccCchhHHHHHHHhhhHHHhCCCHHHHHHHHHHHHHHhccccccccCceecccchhhhHHHHHH
Confidence 24578999999999999999999999854 5677899999999999999999999999999999999999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000284 1506 MIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1580 (1723)
Q Consensus 1506 l~~~p~vllLDEPT~gLD~~~~~~l~~~l~~l~~~~g~~tiiltsH~~~e~~~l~drv~im~~G~l~~~g~~~~l 1580 (1723)
|+.+|++|++||||++|||+-...+.++|++++ +.| .|=+++||..+.+.+.+.||+.|++|+|++.|+....
T Consensus 156 lmmkpqvllfdeptaaldpeitaqvv~iikel~-~tg-itqvivthev~va~k~as~vvyme~g~ive~g~a~~f 228 (242)
T COG4161 156 LMMEPQVLLFDEPTAALDPEITAQIVSIIKELA-ETG-ITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCF 228 (242)
T ss_pred HhcCCcEEeecCcccccCHHHHHHHHHHHHHHH-hcC-ceEEEEEeehhHHHhhhhheEeeecCeeEeecchhhc
Confidence 999999999999999999999999999999996 444 6889999999999999999999999999999987654
No 500
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-38 Score=384.05 Aligned_cols=214 Identities=21% Similarity=0.351 Sum_probs=190.9
Q ss_pred ceEEEEeEEEEecCcCCccceeeeeeEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEccccCCccHHHHhcc
Q 000284 448 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKG 527 (1723)
Q Consensus 448 ~~i~i~~l~k~y~~~~~~~~al~~~sl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ 527 (1723)
+.++++||++.|+++. .+.+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+.
T Consensus 20 ~mL~lknL~~~~~~~~-~~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~P~sGeI~I~G~~~---------- 88 (549)
T PRK13545 20 PFDKLKDLFFRSKDGE-YHYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTMPNKGTVDIKGSAA---------- 88 (549)
T ss_pred ceeEEEEEEEecCCCc-cceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCCCCceEEEECCEee----------
Confidence 5799999999996532 24699999999999999999999999999999999999999999999999641
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhcCCcEee
Q 000284 528 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVI 607 (1723)
Q Consensus 528 ig~~~Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vli 607 (1723)
++++.+.+.+.+|++||+.+.....+.+.++..+++.++++.+++.+..++++++||||||||++|||||+.+|++||
T Consensus 89 --~i~~~~~l~~~lTV~EnL~l~~~~~~~~~~e~~e~i~elLe~lgL~~~ld~~~~~LSGGQrQRVaLArAL~~~P~LLL 166 (549)
T PRK13545 89 --LIAISSGLNGQLTGIENIELKGLMMGLTKEKIKEIIPEIIEFADIGKFIYQPVKTYSSGMKSRLGFAISVHINPDILV 166 (549)
T ss_pred --eEEeccccCCCCcHHHHHHhhhhhcCCCHHHHHHHHHHHHHHcCChhHhhCCcccCCHHHHHHHHHHHHHHhCCCEEE
Confidence 223344567789999999887665666666667778899999999998999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEEeCCEEEEecCHHHHHhhh
Q 000284 608 LDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQY 674 (1723)
Q Consensus 608 LDEPtsgLD~~~r~~l~~~l~~~~-~~~tiil~TH~~~e~~~l~dri~il~~G~l~~~Gs~~~Lk~~~ 674 (1723)
|||||+|||+.+++.+++.|++++ +|+|||++||+++++..+|||+++|++|++.+.|++.++...+
T Consensus 167 LDEPTsgLD~~sr~~LlelL~el~~~G~TIIIVSHdl~~i~~l~DrIivL~~GkIv~~G~~~el~~~~ 234 (549)
T PRK13545 167 IDEALSVGDQTFTKKCLDKMNEFKEQGKTIFFISHSLSQVKSFCTKALWLHYGQVKEYGDIKEVVDHY 234 (549)
T ss_pred EECCcccCCHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHHhhH
Confidence 999999999999999999999986 5899999999999999999999999999999999998886654
Done!