Citrus Sinensis ID: 000288

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390------1400------1410------1420------1430------1440------1450------1460------1470------1480------1490------1500------1510------1520------1530------1540------1550------1560------1570------1580------1590------1600------1610------1620------1630------1640------1650------1660------1670------1680------1690------1700------1710------1720
MGGSASSSHQSGRLKKILSGLRADGEEGKQVEALTQLCEMLSIGTEESLSTFSVDSFAPVLVGLLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVTCFVARLLTIEYMDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAKVLEHASVCLTRIAEAFASSPDKLDELCNHGLVTQAATLISTSNSGGGQASLSTPTYTGLIRLLSTCASGSPLCAKTLLHLGISGILKDILSGSGVSANSAVPPALSRPAEQIFEIVNLANELLPPLPQGTISLPSSSNMFVKGPVVRKSPASSSGKQDDTNGNASEVSAREKLLSDQPELLQQFGMDLLPVLIQIYGSSVNSPVRHKCLSVIGKLMYFSSAEMIQSLLSVTNISSFLAGVLAWKDPHVLIPSLQIAEILMEKLPGTFSKMFVREGVVHAVDQLILAGNTNTVPSQASSADKDNDSIPGSSRSRRYRRRSGNANPECNSSEESKNPVSVNVGSPPSSVEIPTVNSNLRSAVSASAKAFKEKYFPSDPGAAEVGVTDHLLHIKNLCMKLNAGVDDQRTKAKGKSKASGSRLADISATKEEYLIGVISEMLAELSTGDGVSTFEFIGSGVVAALLNYFSCGYKERMSEANMLKLRQQALKRFKSFIAVALPNSLDAGDVAPMTVLVQKLQNALSSLERFPVVLSHSARSSTGSARLSSGLSALSQPFKLRLCRAQGDKSLRDYSSNVVLIDPLASLAAVEEFLWPRVQRNESGQKPSASVGNSESGTAPTGAGASSPSTSTPASSALRHSSRSRLSVNIGDGMKKEPSQEKGTSSSKGKGKAVLKSAQEEVRGPQTRNAARRRAALDKDAQMKQANGDSSSEDEELDISPVEIDDALVIEDDDISDDEDDDHEDVLKDDSLPLCLSDKVHDVKLGDSAEDSTTVPSASDSQNNPASGSSSRGATGRGSDSADFRGGNSYGSRGAMSFAAAAMAGLGSANGRGVRGGRDRHGRPLFGSSNEPPKLIFTVGGKQLNRHLTIYQAIQRQLVLDEDEDERFGGSDFISSDGSRLWNDIYTITYQRADSQADRMSAGVSSSATPSKSSKSGSASNSNSDSASRMSLLDSILQGELPCDLEKSNPTYTILALLRVLEGLNQLAPRLRAQTVCDSYAEGKISSLDELSGTGVRVPYEEFINSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYRLQQQQGADGHGSVNEREIRVGRLERQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTLLSRDLQRVGLAMWRSNSSSENPSMEIDGDEGKSGKTSNISGDLVHAPLGLFPRPWPPSADASEGGQFSKVIEYFRLLGRVMAKALQDGRLLDLPFSTAFYKLVLGHELDLHDIIPFDAEFGKILQELHVIVCRKQHLESMTSDNCEEVVDLRFRGAPIEDLCLDFTLPGYPDYILKPGDENVDINNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS
ccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccHHHHHHHHcHHHHHHHHHcccccccHHHHHHHHHHHHHHHcHHHHHHHcHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHcHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHccHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccEEHHHccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHccccccEEEcccccccccccccccccccccccEEEEEEEcccccccccccccEEEEcccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccEEEEEccEEccccccHHHHHHHHHcccccccccccccccccccccccccccEEEEEEEcccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccHHHHHHHHHHHHHHHHcHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHcccccccccccHHHHHccccccHHHHHHHHHccccccccccccHHHccccccccEEEEEcHHHHHHHHHHHHHccccccEEEEEEccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccHHHHHHHHHHccccccccccHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHcccccccccccccccccccccccEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHcccccccccHHHHHHHcccccccccccHHHHHHHHHHHcccHHHHHHHHHHHccccccccccccccccccCEEEcccccccccccccccccccccccccccHHccccccccccccHHHHHHHHHHHHHHcccccccc
********************LRA*GEEGKQVEALTQLCEMLSIGTEESLSTFSVDSFAPVLVGLLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVTCFVARLLTIEYMDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAKVLEHASVCLTRIAEAFASSPDKLDELCNHGLVTQAATLIS**********LSTPTYTGLIRLLSTCASGSPLCAKTLLHLGISGILKDILSGSGVSANSAVPPALSRPAEQIFEIVNLANELLPPLPQ********************************************LLSDQPELLQQFGMDLLPVLIQIYGSSVNSPVRHKCLSVIGKLMYFSSAEMIQSLLSVTNISSFLAGVLAWKDPHVLIPSLQIAEILMEKLPGTFSKMFVREGVVHAVDQLIL********************************************************************************************AAEVGVTDHLLHIKNLCMKLNAG*********************ISATKEEYLIGVISEMLAELSTGDGVSTFEFIGSGVVAALLNYFSCGYKERMSEANMLKLRQQALKRFKSFIAVALPNSLDAGDVAPMTVLVQKLQNALSSLERFPVVL**********************PFKLRLCRAQGDKSLRDYSSNVVLIDPLASLAAVEEFLWPR*****************************************************************************************************************************************************************************************************************************************************************LIFTVGGKQLNRHLTIYQAIQRQLVLDE***************GSRLWNDIYTITYQ****************************************LLDSILQGELPCDLEKSNPTYTILALLRVLEGLNQLAPRLRAQTVCDSYAEGKISSLDELSGTGVRVPYEEFINSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYR*************************QKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTLLSRDLQRVGLAMWRSNSSSENPSME***********SNISGDLVHAPLGLFPRPWPP********QFSKVIEYFRLLGRVMAKALQDGRLLDLPFSTAFYKLVLGHELDLHDIIPFDAEFGKILQELHVIVCRKQHLESMTSDNCEEVVDLRFRGAPIEDLCLDFTLPGYPDYILKPGDENVDINNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSST****************DDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDL*
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MGGSASSSHQSGRLKKILSGLRADGEEGKQVEALTQLCEMLSIGTEESLSTFSVDSFAPVLVGLLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVTCFVARLLTIEYMDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAKVLEHASVCLTRIAEAFASSPDKLDELCNHGLVTQAATLISTSNSGGGQASLSTPTYTGLIRLLSTCASGSPLCAKTLLHLGISGILKDILSGSGVSANSAVPPALSRPAEQIFEIVNLANELLPPLPQGTISLPSSSNMFVKGPVVRKSPASSSGKQDDTNGNASEVSAREKLLSDQPELLQQFGMDLLPVLIQIYGSSVNSPVRHKCLSVIGKLMYFSSAEMIQSLLSVTNISSFLAGVLAWKDPHVLIPSLQIAEILMEKLPGTFSKMFVREGVVHAVDQLILAGNTNTVPSQASSADKDNDSIPGSSRSRRYRRRSGNANPECNSSEESKNPVSVNVGSPPSSVEIPTVNSNLRSAVSASAKAFKEKYFPSDPGAAEVGVTDHLLHIKNLCMKLNAGVDDQRTKAKGKSKASGSRLADISATKEEYLIGVISEMLAELSTGDGVSTFEFIGSGVVAALLNYFSCGYKERMSEANMLKLRQQALKRFKSFIAVALPNSLDAGDVAPMTVLVQKLQNALSSLERFPVVLSHSARSSTGSARLSSGLSALSQPFKLRLCRAQGDKSLRDYSSNVVLIDPLASLAAVEEFLWPRVQRNESGQKPSASVGNSESGTAPTGAGASSPSTSTPASSALRHSSRSRLSVNIGDGMKKEPSQEKGTSSSKGKGKAVLKSAQEEVRGPQTRNAARRRAALDKDAQMKQANGDSSSEDEELDISPVEIDDALVIEDDDISDDEDDDHEDVLKDDSLPLCLSDKVHDVKLGDSAEDSTTVPSASDSQNNPASGSSSRGATGRGSDSADFRGGNSYGSRGAMSFAAAAMAGLGSANGRGVRGGRDRHGRPLFGSSNEPPKLIFTVGGKQLNRHLTIYQAIQRQLVLDEDEDERFGGSDFISSDGSRLWNDIYTITYQRADSQADRMSAGVSSSATPSKSSKSGSASNSNSDSASRMSLLDSILQGELPCDLEKSNPTYTILALLRVLEGLNQLAPRLRAQTVCDSYAEGKISSLDELSGTGVRVPYEEFINSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYRLQQQQGADGHGSVNEREIRVGRLERQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTLLSRDLQRVGLAMWRSNSSSENPSMEIDGDEGKSGKTSNISGDLVHAPLGLFPRPWPPSADASEGGQFSKVIEYFRLLGRVMAKALQDGRLLDLPFSTAFYKLVLGHELDLHDIIPFDAEFGKILQELHVIVCRKQHLESMTSDNCEEVVDLRFRGAPIEDLCLDFTLPGYPDYILKPGDENVDINNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTAPNTASNGTGPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLVYAISEGQGSFDLS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
E3 ubiquitin-protein ligase UPL3 Probable E3 ubiquitin-protein ligase which mediates ubiquitination and subsequent proteasomal degradation of target proteins. Involved in the repression of endoreduplication process and the cell morphogenesis in the trichomes.confidentQ6WWW4

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3H1D, chain A
Confidence level:very confident
Coverage over the Query: 1240-1264,1275-1288,1302-1379,1420-1471,1485-1497,1509-1662,1679-1712
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View the model in PyMOL
Template: 2ONI, chain A
Confidence level:very confident
Coverage over the Query: 1254-1264,1275-1285,1301-1370,1398-1477,1492-1493,1506-1661,1679-1711
View the alignment between query and template
View the model in PyMOL
Template: 3G1N, chain A
Confidence level:confident
Coverage over the Query: 1297-1366,1390-1476,1489-1662,1679-1712
View the alignment between query and template
View the model in PyMOL
Template: 2XBB, chain A
Confidence level:confident
Coverage over the Query: 1302-1386,1420-1476,1489-1716
View the alignment between query and template
View the model in PyMOL
Template: 4DB8, chain A
Confidence level:confident
Coverage over the Query: 11-238
View the alignment between query and template
View the model in PyMOL
Template: 1WA5, chain B
Confidence level:probable
Coverage over the Query: 22-417
View the alignment between query and template
View the model in PyMOL
Template: 2Z6H, chain A
Confidence level:probable
Coverage over the Query: 59-263
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View the model in PyMOL
Template: 1RM1, chain C
Confidence level:probable
Coverage over the Query: 899-955
View the alignment between query and template
View the model in PyMOL