BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000290
(1717 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens GN=BPTF
PE=1 SV=3
Length = 3046
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 9/165 (5%)
Query: 186 LPPPQLPPSSGTIGMPEEYVSHLFSVYGFLRSFGIHLFLSPIGLDDFVGSLNCCVPNTLL 245
+PP + P SS + +P E++ ++ ++Y LR+FG L LSP +DF +L TL+
Sbjct: 224 IPPLEFPKSSEDLMVPNEHIMNVIAIYEVLRNFGTVLRLSPFRFEDFCAALVSQEQCTLM 283
Query: 246 DAIHVALMRVLRRHLETLSSDGSELASNCLRCIDWSL--LDTLTWPVYVVQYLTSMGYIK 303
+HV L++ + R +T S+ + ++ ++ +L +D +TWP + Y S
Sbjct: 284 AEMHVVLLKAVLREEDT--SNTTFGPADLKDSVNSTLYFIDGMTWPEVLRVYCES----- 336
Query: 304 GTQWTGFYDEVSVREYYSLSAGRKLMILQILCDDVLDSEELRAEI 348
++ +Y K+ +LQ L D L + R E+
Sbjct: 337 DKEYHHVLPYQEAEDYPYGPVENKIKVLQFLVDQFLTTNIAREEL 381
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 45/105 (42%), Gaps = 7/105 (6%)
Query: 427 DECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGPIVTIGTSLR 486
D CR+C G LLCC+ C + YH C+ VPE W C C +KV + ++
Sbjct: 391 DHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEIQ 450
Query: 487 G------AELFGIDLYERVFLGTCNHLLVLNASSN-TEQYIRYYN 524
E G D R + L++ + N E+ I YY+
Sbjct: 451 KNKPYIRHEPIGYDRSRRKYWFLNRRLIIEEDTENENEKKIWYYS 495
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 1367 LCKQPYNSNLMYIHCETCQRWFHADAVELEESKLSDVVGFKCCRCR 1412
+CK PY+ + YI C+ CQ W+H V + +S+ + + C +C+
Sbjct: 2871 ICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQ 2916
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 46/82 (56%), Gaps = 11/82 (13%)
Query: 1005 SKKAI--LPHTIIRNAARRGGLRKISGVNYTAE---------MPKRSRQLVWRAAVERSK 1053
SKK+I LP+ ++ AR+GG+R++ NY A+ P+ + + WR ++ K
Sbjct: 1842 SKKSIFVLPNDDLKKLARKGGIREVPYFNYNAKPALDIWPYPSPRPTFGITWRYRLQTVK 1901
Query: 1054 TVSQLALQVRYIDLHVRWSELV 1075
+++ ++L +R + +RW ++
Sbjct: 1902 SLAGVSLMLRLLWASLRWDDMA 1923
>sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF301 OS=Drosophila
melanogaster GN=E(bx) PE=1 SV=2
Length = 2669
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 4/155 (2%)
Query: 191 LPPSSGTIGMPEEYVSHLFSVYGFLRSFGIHLFLSPIGLDDFVGSLNCCVPNTLLDAIHV 250
LP SS + + +V S+Y LR F + LSP +D +L C + LL +H+
Sbjct: 177 LPDSSEDLFIANTHVLRALSIYEVLRRFRHMVRLSPFRFEDLCAALACEEQSALLTEVHI 236
Query: 251 ALMRVLRRHLETLSSDGSELASNCLRCIDWSLLDTLTWPVYVVQYLTSMGYIKGTQWTGF 310
L++ + R + + L I L+D++TWP + Y+ S T
Sbjct: 237 MLLKAILREEDAQGTHFGPLDQKDTVNISLYLIDSITWPEVLRSYVES----DKTFDRNV 292
Query: 311 YDEVSVREYYSLSAGRKLMILQILCDDVLDSEELR 345
+ +S EY +L +LQ L D L S +R
Sbjct: 293 FHILSHTEYPYTGIDNRLEVLQFLSDQFLTSNSIR 327
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%)
Query: 427 DECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGPIV 479
D CR+C G LLCC+ CP+ YH C+ VP W C C +KV +V
Sbjct: 340 DHCRVCHRLGDLLCCETCPAVYHLECVDPPMNDVPTEDWQCGLCRSHKVSGVV 392
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 1345 DFRRANVL-PR------GKSVAHLEPVCDLCKQPYNSNLMYIHCETCQRWFHADAVELEE 1397
DF+R V PR K E + +C+ PY+ Y+ C+ C WFH D V + E
Sbjct: 2414 DFKRTEVQNPRHGAGRPKKLTRKKEKLYCICRTPYDDTKFYVGCDLCSNWFHGDCVSITE 2473
Query: 1398 SKLSDVVGFKCCRCRR 1413
+ F C C+R
Sbjct: 2474 EASKKLSEFICIDCKR 2489
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 1368 CKQPYNSNLMYIHCETCQRWFHADAVELEESKLSDVVGFKCCRCRR 1413
C+QPY+ + YI C+ CQ WFH V + +S+ + + C C+R
Sbjct: 2500 CRQPYDESQFYICCDKCQDWFHGRCVGILQSEAEFIDEYVCPECQR 2545
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog
OS=Drosophila melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 28/43 (65%)
Query: 429 CRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECA 471
CR+C G LLCCD CPSAYHT C+ +P+G W CP C+
Sbjct: 440 CRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCS 482
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 23/44 (52%)
Query: 427 DECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 470
D C +C G ++ CD CP AYH C+ PEG W CP C
Sbjct: 378 DYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHC 421
>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus GN=Chd4
PE=1 SV=1
Length = 1915
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 12/104 (11%)
Query: 374 VHPRFSKTPDCK------NREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDVDGNGD 427
+ P K P+ K +E +++ A+ D + + +G E D D + +
Sbjct: 390 LDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNSEGEEILEEVGGDPEEED------DHHME 443
Query: 428 ECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECA 471
CR+C G LLCCD CPS+YH C+ +P G W CP C
Sbjct: 444 FCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 487
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 422 VDG----NGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 470
VDG + D C +C G ++ CD CP AYH C+ PEG W CP C
Sbjct: 355 VDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 407
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog
OS=Caenorhabditis elegans GN=chd-3 PE=2 SV=2
Length = 1787
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 27/49 (55%)
Query: 424 GNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAI 472
N D CRIC +L CD CPS+YH CI +PEG W CP C I
Sbjct: 326 ANMDYCRICKETSNILLCDTCPSSYHAYCIDPPLTEIPEGEWSCPRCII 374
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 419 GVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGPI 478
GV + + + C +C DG L+ CD C AYH CI + PEG W CP C + GP
Sbjct: 258 GVVEENHQENCEVCNQDGELMLCDTCTRAYHVACIDENMEQPPEGDWSCPHC--EEHGPD 315
Query: 479 VTI 481
V I
Sbjct: 316 VLI 318
>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4
PE=1 SV=2
Length = 1912
Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 12/104 (11%)
Query: 374 VHPRFSKTPDCK------NREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDVDGNGD 427
+ P K P+ K +E +++ A+ D + + +G E D D + +
Sbjct: 397 LDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNSEGEEILEEVGGDLEEED------DHHME 450
Query: 428 ECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECA 471
CR+C G LLCCD CPS+YH C+ +P G W CP C
Sbjct: 451 FCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 422 VDG----NGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 470
VDG + D C +C G ++ CD CP AYH C+ PEG W CP C
Sbjct: 362 VDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 414
>sp|Q9ULU4|PKCB1_HUMAN Protein kinase C-binding protein 1 OS=Homo sapiens GN=ZMYND8 PE=1
SV=2
Length = 1186
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 376 PRFSKTPDCKNREAVEFNAENDRMKTSCKAKPLGFKGTEMDAPGVDV---DGNGD-ECRI 431
P+ + T K ++ N++ ++ + P + + VDV DG D C +
Sbjct: 34 PQDTSTSPIKKKKKPGLLNSNNKEQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCWV 93
Query: 432 CGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 470
C +G +LCC+ CP YH +C+ ++ PEG W+CPEC
Sbjct: 94 CHREGQVLCCELCPRVYHAKCLRLTSE--PEGDWFCPEC 130
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
PE=2 SV=1
Length = 1954
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 25/43 (58%)
Query: 429 CRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECA 471
CR+C G LLCCD CPS+YH C+ +P G W CP C
Sbjct: 419 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 461
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 416 DAPGVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 470
D G + D + D C +C G ++ CD CP AYH C+ PEG W CP C
Sbjct: 334 DGDGYETD-HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 387
>sp|O88491|NSD1_MOUSE Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20
specific OS=Mus musculus GN=Nsd1 PE=1 SV=1
Length = 2588
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 429 CRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINK 474
C +C G+LLCCD CP+A+H C+ + +PEG+WYC +C K
Sbjct: 1608 CFVCSEGGSLLCCDSCPAAFHRECLNID---IPEGNWYCNDCKAGK 1650
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 427 DECRICGMDGTLLCCD--GCPSAYHTRCIGVSKMYVPEGSWYCP 468
DEC CG G L+ C GCP YH C+ ++K P G W CP
Sbjct: 2017 DECFSCGDAGQLVSCKKPGCPKVYHADCLNLTKR--PAGKWECP 2058
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 429 CRICGMDGTLLCCDG-CPSAYHTRCIGVSKMYVPEGSWYCPEC 470
C+ C G LL C+ C A+H C+G+ +M P G + C EC
Sbjct: 1444 CQNCEKLGELLLCEAQCCGAFHLECLGLPEM--PRGKFICNEC 1484
>sp|Q96L73|NSD1_HUMAN Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20
specific OS=Homo sapiens GN=NSD1 PE=1 SV=1
Length = 2696
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 429 CRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINK 474
C +C G+LLCCD CP+A+H C+ + +PEG+WYC +C K
Sbjct: 1710 CFVCSEGGSLLCCDSCPAAFHRECLNID---IPEGNWYCNDCKAGK 1752
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 427 DECRICGMDGTLLCCD--GCPSAYHTRCIGVSKMYVPEGSWYCP--ECAI 472
DEC CG G L+ C GCP YH C+ ++K P G W CP +C I
Sbjct: 2119 DECFSCGDAGQLVSCKKPGCPKVYHADCLNLTKR--PAGKWECPWHQCDI 2166
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 429 CRICGMDGTLLCCDG-CPSAYHTRCIGVSKMYVPEGSWYCPEC 470
C+ C G LL C+ C A+H C+G+++M P G + C EC
Sbjct: 1546 CQNCEKLGELLLCEAQCCGAFHLECLGLTEM--PRGKFICNEC 1586
>sp|G5EBZ4|LE418_CAEEL Protein let-418 OS=Caenorhabditis elegans GN=let-418 PE=1 SV=1
Length = 1829
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 25/46 (54%)
Query: 425 NGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 470
N D C C DG LL CD CP AYHT CI + PEG W C C
Sbjct: 255 NNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHC 300
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 425 NGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVP-EGSWYCPECAINK 474
N + C+IC LL CD C ++H CI VP E +W CP C K
Sbjct: 316 NDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCPRCETVK 366
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
melanogaster GN=Chd3 PE=2 SV=3
Length = 892
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 429 CRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 470
C++C G LLCCD CPS YH C+ +P+G W CP C
Sbjct: 38 CKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGDWICPRC 79
>sp|Q9SGH2|MBD9_ARATH Methyl-CpG-binding domain-containing protein 9 OS=Arabidopsis
thaliana GN=MBD9 PE=2 SV=1
Length = 2176
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 429 CRICGMD---GTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINK 474
C++CG+D ++L CD C + YHT C+ + +P+G+WYCP C I K
Sbjct: 1290 CKVCGVDKDDDSVLLCDTCDAEYHTYCLNPPLIRIPDGNWYCPSCVIAK 1338
>sp|Q9HDV4|LID2_SCHPO Lid2 complex component lid2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=lid2 PE=1 SV=1
Length = 1513
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 426 GDECRICGMDG---TLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAIN 473
G++C CG+D T+L CDGC +AYHT C+ +P+ WYC C N
Sbjct: 268 GEQCEYCGLDKNPETILLCDGCEAAYHTSCLDPPLTSIPKEDWYCDACKFN 318
>sp|O43918|AIRE_HUMAN Autoimmune regulator OS=Homo sapiens GN=AIRE PE=1 SV=1
Length = 545
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 425 NGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 470
N DEC +C G L+CCDGCP A+H C+ +P G+W C C
Sbjct: 295 NEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 340
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 423 DGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 470
D + + CR+C G LLCCD C S+YH C+ +P G W CP C
Sbjct: 453 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 500
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 398 RMKTSCKAKPLGFKGTEMDAPGV----DVDG----NGDECRICGMDGTLLCCDGCPSAYH 449
R K + +P K + P V +VDG + D C +C G ++ CD CP AYH
Sbjct: 343 RTKKLKRGRPGRKKKKVLGCPAVAGEEEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYH 402
Query: 450 TRCIGVSKMYVPEGSWYCPEC 470
C+ PEG W CP C
Sbjct: 403 LVCLDPELDRAPEGKWSCPHC 423
>sp|Q6BER5|NU301_CAEEL Nucleosome-remodeling factor subunit NURF301-like OS=Caenorhabditis
elegans GN=nurf-1 PE=1 SV=2
Length = 2194
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 13/201 (6%)
Query: 149 LTVEDVGEQVEGDMDSSSDSCEHVRETDAGLEAETPLLPPPQLPPSSGTIGMPEEYVSHL 208
L + D+ ++E +D + C + E A L P +LP SS I +P +
Sbjct: 152 LNLTDI--KIEKGLDEENKYCPWLDEDPASL-------PKLELPESSQDIPIPTASIMDA 202
Query: 209 FSVYGFLRSFGIHLFLSPIGLDDFVGSLNCCVPNTLLDAIHVALMRVLRRHLETLSSDGS 268
+Y LRS+ L ++P +DF +L + ++ +H+AL+R + + + S
Sbjct: 203 VEIYEILRSYHRTLRITPFTFEDFCAALISHNNSCIMAEVHMALLRNCLKSDDEEQTHYS 262
Query: 269 ELASNCLRCIDWSLLDTLTWPVYVVQYLTSMGYIKGTQWTGFYDEVSVREYYSLSAGRKL 328
+N I +DTLT+ + QY+ + + + D ++V Y + KL
Sbjct: 263 VTETNNSVNIMIHHMDTLTYAEILRQYIEAYPFADAS----VRDAINVDNYPFVGYDAKL 318
Query: 329 MILQILCDDVLDSEELRAEID 349
++L + L S E + ++
Sbjct: 319 VVLLFMSYRFLYSSEFKKLVN 339
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 1367 LCKQPYNSNLMYIHCETCQRWFHADAVELEESKLSDVVGFKCCRCRR 1413
+C++PY+ Y+ C++CQ WFH + V ++ + C C R
Sbjct: 1963 VCQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPACTR 2009
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 14/68 (20%)
Query: 1368 CKQPYNSNLMYIHCETCQRWFHADAVELEESKLSDVVGFKCCRCRRIGGPECPYMDPELK 1427
C++ ++++ +YI CE C RW+H D V + E + + + C C ++
Sbjct: 1904 CQKIFDASKLYIQCELCARWYHGDCVGVAEQTILGLEHWSCEEC--------------IE 1949
Query: 1428 EQKRKKDQ 1435
EQ+R KDQ
Sbjct: 1950 EQERVKDQ 1957
>sp|Q9Z0E3|AIRE_MOUSE Autoimmune regulator OS=Mus musculus GN=Aire PE=1 SV=1
Length = 552
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%)
Query: 425 NGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKV 475
N DEC +C G L+CCDGCP A+H C+ +P G W C C +V
Sbjct: 297 NEDECAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWRCSCCLQGRV 347
>sp|Q09819|YAC5_SCHPO Uncharacterized protein C16C9.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC16C9.05 PE=1 SV=1
Length = 404
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 425 NGDECRICGMDGTLLCCDGCPSAYHTRCI--GVSKMYVPEGSWYCPECAINKVGP 477
N D C CG G +CC+GCP ++H C+ ++ +PEGSW+C C+I P
Sbjct: 116 NVDYCSACGGRGLFICCEGCPCSFHLSCLEPPLTPENIPEGSWFCVTCSIKSHHP 170
>sp|Q80TJ7|PHF8_MOUSE Histone lysine demethylase PHF8 OS=Mus musculus GN=Phf8 PE=1 SV=2
Length = 1023
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 1363 PVCDLCKQPYNSNLMYIHCETCQRWFHADAVELEESKLSDVVGFKCCRCRRIGGP 1417
PV LC+ PY+ I C+ CQ WFH V +EE K +D+ + C C + GP
Sbjct: 5 PVYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLHGP 59
>sp|Q63625|PHRF1_RAT PHD and RING finger domain-containing protein 1 OS=Rattus
norvegicus GN=Phrf1 PE=1 SV=2
Length = 1685
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 429 CRICGM---DGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGP 477
C +CG + LL CDGC + YH C+ VP W+CPECA+ V P
Sbjct: 191 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAVPGVDP 242
>sp|Q9UPP1|PHF8_HUMAN Histone lysine demethylase PHF8 OS=Homo sapiens GN=PHF8 PE=1 SV=3
Length = 1060
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 1363 PVCDLCKQPYNSNLMYIHCETCQRWFHADAVELEESKLSDVVGFKCCRCRRIGGP 1417
PV LC+ PY+ I C+ CQ WFH V +EE K +D+ + C C + GP
Sbjct: 41 PVYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLHGP 95
>sp|Q08D35|KDM7_XENTR Lysine-specific demethylase 7 OS=Xenopus tropicalis GN=jhdm1d PE=2
SV=1
Length = 922
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 1358 VAHLEPVCDLCKQPYNSNLMYIHCETCQRWFHADAVELEESKLSDVVGFKCCRCRRIGGP 1417
+A PV +C+QPY+ + I C+ C+ WFH+ V++EE + +D+ + C C + GP
Sbjct: 1 MAGAAPVYCVCRQPYDVSRFMIECDICKDWFHSSCVKVEEHQAADIDLYHCPNCEVLHGP 60
>sp|Q96BD5|PF21A_HUMAN PHD finger protein 21A OS=Homo sapiens GN=PHF21A PE=1 SV=1
Length = 680
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 395 ENDRMKTSCKAKPLGFKGTEMDAP-GVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCI 453
EN++ +T+ P + + +P D D + D C +C G LL CD C YH C+
Sbjct: 457 ENEKTETTFTF-PAPVQPVSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCL 515
Query: 454 GVSKMYVPEGSWYCPEC 470
+P+G W CP C
Sbjct: 516 DPPLKTIPKGMWICPRC 532
>sp|Q9NRL2|BAZ1A_HUMAN Bromodomain adjacent to zinc finger domain protein 1A OS=Homo sapiens
GN=BAZ1A PE=1 SV=2
Length = 1556
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 429 CRICGMDG---TLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 470
C+IC G ++ CDGC +HT C+ VPEG W+CPEC
Sbjct: 1151 CKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKTVPEGDWFCPEC 1195
>sp|Q04779|RCO1_YEAST Transcriptional regulatory protein RCO1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RCO1 PE=1 SV=1
Length = 684
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 425 NGDECRICGMDGTLLCCDGCPSAYHTRCIG--VSKMYVPEGSWYCPECAI 472
N D C C G+ LCCD CP ++H C+ + +P+G W+C EC
Sbjct: 259 NEDFCSACNQSGSFLCCDTCPKSFHFLCLDPPIDPNNLPKGDWHCNECKF 308
>sp|Q8UVR5|BAZ1A_XENLA Bromodomain adjacent to zinc finger domain protein 1A (Fragment)
OS=Xenopus laevis GN=baz1a PE=2 SV=1
Length = 627
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 429 CRICGMDG---TLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 470
C++C G +++ CDGC +H C+ YVPEG W+CPEC
Sbjct: 225 CKVCRKKGDGESMVLCDGCDRGHHIYCVRPKLKYVPEGDWFCPEC 269
>sp|Q6ZPK0|PF21A_MOUSE PHD finger protein 21A OS=Mus musculus GN=Phf21a PE=1 SV=2
Length = 659
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 395 ENDRMKTSCKAKPLGFKGTEMDAP-GVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCI 453
EN++ +T+ P + + +P D D + D C +C G LL CD C YH C+
Sbjct: 437 ENEKTETTFTF-PAPVQPVSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCL 495
Query: 454 GVSKMYVPEGSWYCPEC 470
+P+G W CP C
Sbjct: 496 EPPLKTIPKGMWICPRC 512
>sp|Q8BVE8|NSD2_MOUSE Histone-lysine N-methyltransferase NSD2 OS=Mus musculus GN=Whsc1
PE=1 SV=2
Length = 1365
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 429 CRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINK 474
C +C G+LLCC+ CP+A+H C+ + +P+GSW+C +C K
Sbjct: 834 CFVCSKGGSLLCCEACPAAFHPDCLNIE---MPDGSWFCNDCRAGK 876
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 429 CRICGMDGTLLCCDG-CPSAYHTRCIGVSKMYVPEGSWYCPECA 471
C++C G+LL C+G C A+H C+G+S+ PEG + C ECA
Sbjct: 670 CQLCEKTGSLLLCEGPCCGAFHLACLGLSRR--PEGRFTCTECA 711
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 427 DECRICGMDGTLLCCDG--CPSAYHTRCIGVSKMYVPEGSWYCP 468
DEC CG G L+ CD C AYH C+G+ K P G W CP
Sbjct: 1240 DECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKR--PFGKWECP 1281
>sp|Q96T23|RSF1_HUMAN Remodeling and spacing factor 1 OS=Homo sapiens GN=RSF1 PE=1 SV=2
Length = 1441
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 429 CRICGMDG---TLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 470
C+ CG+ +L CD C S YHT C+ M +P+G W+CP C
Sbjct: 894 CKKCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPC 938
>sp|Q5RHD1|KDM7A_DANRE Lysine-specific demethylase 7A OS=Danio rerio GN=jhdm1da PE=2 SV=2
Length = 875
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 1363 PVCDLCKQPYNSNLMYIHCETCQRWFHADAVELEESKLSDVVGFKCCRCRRIGGP 1417
P+ +C+QPY+ N I C+ C+ WFH V++ E +D+ + C C I GP
Sbjct: 5 PLYCVCRQPYDVNRFMIECDICKDWFHGSCVQVVEHHAADIDVYHCPNCEPIHGP 59
>sp|O96028|NSD2_HUMAN Histone-lysine N-methyltransferase NSD2 OS=Homo sapiens GN=WHSC1
PE=1 SV=1
Length = 1365
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 429 CRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINK 474
C +C G+LLCC+ CP+A+H C+ + +P+GSW+C +C K
Sbjct: 834 CFVCSKGGSLLCCESCPAAFHPDCLNIE---MPDGSWFCNDCRAGK 876
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 429 CRICGMDGTLLCCDG-CPSAYHTRCIGVSKMYVPEGSWYCPECA 471
C++C G+LL C+G C A+H C+G+S+ PEG + C ECA
Sbjct: 670 CQLCEKPGSLLLCEGPCCGAFHLACLGLSRR--PEGRFTCSECA 711
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 427 DECRICGMDGTLLCCDG--CPSAYHTRCIGVSKMYVPEGSWYCP 468
DEC CG G L+ CD C AYH C+G+ K P G W CP
Sbjct: 1240 DECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKR--PFGKWECP 1281
>sp|Q9VMJ7|KDM5_DROME Lysine-specific demethylase lid OS=Drosophila melanogaster GN=lid
PE=1 SV=1
Length = 1838
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 429 CRICG---MDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGPIVTIGTSL 485
C IC ++ ++L CDGC +YHT C+ +P+G W CP C + +V
Sbjct: 451 CHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGEWLCPRCVVEEVS--------- 501
Query: 486 RGAELFGIDLYERVF 500
+ E FG + ER +
Sbjct: 502 KPQEAFGFEQAEREY 516
>sp|A6H619|PHRF1_MOUSE PHD and RING finger domain-containing protein 1 OS=Mus musculus
GN=Phrf1 PE=1 SV=2
Length = 1682
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 429 CRICGM---DGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKVGP 477
C +CG + LL CDGC + YH C+ VP W+CPEC + V P
Sbjct: 188 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECTVPGVDP 239
>sp|O88379|BAZ1A_MOUSE Bromodomain adjacent to zinc finger domain protein 1A OS=Mus musculus
GN=Baz1a PE=1 SV=3
Length = 1555
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 429 CRICGMDG---TLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 470
C+IC G ++ CDGC +HT C+ VP+G W+CPEC
Sbjct: 1152 CKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKAVPDGDWFCPEC 1196
>sp|P0CH95|PHF8_DANRE Histone lysine demethylase PHF8 OS=Danio rerio GN=phf8 PE=1 SV=1
Length = 1032
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 1363 PVCDLCKQPYNSNLMYIHCETCQRWFHADAVELEESKLSDVVGFKCCRCRRIGGP 1417
PV LC+ PY+ I C+ CQ WFH V +EE K +++ + C C+ GP
Sbjct: 5 PVYCLCRLPYDVTRFMIECDVCQDWFHGSCVGVEEDKAAEIDLYHCPNCQVTHGP 59
>sp|Q96QT6|PHF12_HUMAN PHD finger protein 12 OS=Homo sapiens GN=PHF12 PE=1 SV=2
Length = 1004
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 425 NGDECRICGMDGTLLCCDGCPSAYHTRCIG--VSKMYVPEGSWYCPECAINK 474
N D C C G LLCCD CP+A+H +C +S+ +P G W C C + +
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRR 106
>sp|Q5SPL2|PHF12_MOUSE PHD finger protein 12 OS=Mus musculus GN=Phf12 PE=2 SV=1
Length = 1003
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 425 NGDECRICGMDGTLLCCDGCPSAYHTRCIG--VSKMYVPEGSWYCPECAINK 474
N D C C G LLCCD CP+A+H +C +S+ +P G W C C + +
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRR 106
>sp|Q09698|YA27_SCHPO Uncharacterized protein C2F7.07c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC2F7.07c PE=4 SV=1
Length = 607
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 425 NGDECRICGMDGTLLCCDGCPSAYHTRCIG--VSKMYVPEGSWYCPEC 470
N D C C G LCC+ CP+++H CI + + +P+ +WYC EC
Sbjct: 262 NNDYCSACHGPGNFLCCETCPNSFHFTCIDPPIEEKNLPDDAWYCNEC 309
>sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1 OS=Homo sapiens
GN=PHRF1 PE=1 SV=3
Length = 1649
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 429 CRICGM---DGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPECAINKV 475
C +CG + LL CDGC + YH C+ VP W+CPECA V
Sbjct: 186 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAAPGV 235
>sp|Q9UPN9|TRI33_HUMAN E3 ubiquitin-protein ligase TRIM33 OS=Homo sapiens GN=TRIM33 PE=1
SV=3
Length = 1127
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 26/55 (47%)
Query: 416 DAPGVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 470
D D D N D C +C G LLCC+ CP +H C + + P G W C C
Sbjct: 877 DGNNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFC 931
>sp|Q99PP7|TRI33_MOUSE E3 ubiquitin-protein ligase TRIM33 OS=Mus musculus GN=Trim33 PE=1
SV=2
Length = 1142
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 26/55 (47%)
Query: 416 DAPGVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 470
D D D N D C +C G LLCC+ CP +H C + + P G W C C
Sbjct: 892 DGNSKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFC 946
>sp|Q8H383|ALFL2_ORYSJ PHD finger protein ALFIN-LIKE 2 OS=Oryza sativa subsp. japonica
GN=Os07g0233300 PE=2 SV=1
Length = 244
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 1360 HLEPVCDLCKQPYNSNLMYIHCETCQRWFHADAVELEESKLSDVVGFKCCRC 1411
H E +C C YN+N +I C+ C+RWFH V + +K + +KC C
Sbjct: 185 HSETLCGTCGGRYNANEFWIGCDICERWFHGKCVRITPAKAEHIKHYKCPDC 236
>sp|B8B8I3|ALFL2_ORYSI PHD finger protein ALFIN-LIKE 2 OS=Oryza sativa subsp. indica
GN=OsI_25444 PE=3 SV=1
Length = 244
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 1360 HLEPVCDLCKQPYNSNLMYIHCETCQRWFHADAVELEESKLSDVVGFKCCRC 1411
H E +C C YN+N +I C+ C+RWFH V + +K + +KC C
Sbjct: 185 HSETLCGTCGGRYNANEFWIGCDICERWFHGKCVRITPAKAEHIKHYKCPDC 236
>sp|Q6E2N3|TRI33_DANRE E3 ubiquitin-protein ligase TRIM33 OS=Danio rerio GN=trim33 PE=2
SV=1
Length = 1163
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 25/52 (48%)
Query: 419 GVDVDGNGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 470
G + D N D C +C G LLCCD CP +H C + P G W C C
Sbjct: 914 GKEDDPNEDWCAVCQNGGELLCCDHCPKVFHITCHIPTLKSSPSGDWMCTFC 965
>sp|Q9UIG0|BAZ1B_HUMAN Tyrosine-protein kinase BAZ1B OS=Homo sapiens GN=BAZ1B PE=1 SV=2
Length = 1483
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 421 DVDGNGDECRIC---GMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 470
D+ C++C G D L+ CD C A+H C+ + VP+G W CP C
Sbjct: 1179 DMSAENARCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1231
>sp|Q9Z277|BAZ1B_MOUSE Tyrosine-protein kinase BAZ1B OS=Mus musculus GN=Baz1b PE=1 SV=2
Length = 1479
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 421 DVDGNGDECRIC---GMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYCPEC 470
D+ C++C G D L+ CD C A+H C+ + VP+G W CP C
Sbjct: 1179 DMSAENARCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1231
>sp|Q924W6|TRI66_MOUSE Tripartite motif-containing protein 66 OS=Mus musculus GN=Trim66 PE=1
SV=3
Length = 1242
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 49/122 (40%), Gaps = 21/122 (17%)
Query: 425 NGDECRICGMDGTLLCCDGCPSAYHTRCIGVSKMYVPEGSWYC--------PE----CAI 472
N D C +C G LLCCD CP YH C + + P G W C PE C
Sbjct: 995 NEDFCAVCINGGELLCCDRCPKVYHLSCHVPALLSFPGGEWVCTLCRSLTQPEMEYDCEN 1054
Query: 473 NKVG-PIVTIGTSLRGAELFGIDLYERVFLGTCNHLLVLNASSNTEQYIRYY-----NPI 526
+ G P V + L G ++ E++ L C + L L R+Y P+
Sbjct: 1055 ARYGHPGVRV---LPGLSMYDQKKCEKLVLSLCCNSLSLPFHEPVSPLARHYYQIIKRPM 1111
Query: 527 DI 528
D+
Sbjct: 1112 DL 1113
>sp|Q84TV4|ALFL3_ORYSJ PHD finger protein ALFIN-LIKE 3 OS=Oryza sativa subsp. japonica
GN=Os03g0818300 PE=2 SV=1
Length = 247
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 1360 HLEPVCDLCKQPYNSNLMYIHCETCQRWFHADAVELEESKLSDVVGFKCCRC 1411
H E C C YN+N +I C+ C+RWFH V + +K + +KC C
Sbjct: 186 HNETFCGTCGGLYNANEFWIGCDICERWFHGKCVRITPAKAEHIKHYKCPDC 237
>sp|B8AMA8|ALFL3_ORYSI PHD finger protein ALFIN-LIKE 3 OS=Oryza sativa subsp. indica
GN=OsI_14081 PE=3 SV=2
Length = 247
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 1360 HLEPVCDLCKQPYNSNLMYIHCETCQRWFHADAVELEESKLSDVVGFKCCRC 1411
H E C C YN+N +I C+ C+RWFH V + +K + +KC C
Sbjct: 186 HNETFCGTCGGLYNANEFWIGCDICERWFHGKCVRITPAKAEHIKHYKCPDC 237
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 646,045,434
Number of Sequences: 539616
Number of extensions: 28324006
Number of successful extensions: 90320
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 152
Number of HSP's that attempted gapping in prelim test: 88857
Number of HSP's gapped (non-prelim): 1435
length of query: 1717
length of database: 191,569,459
effective HSP length: 132
effective length of query: 1585
effective length of database: 120,340,147
effective search space: 190739132995
effective search space used: 190739132995
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)