Query 000292
Match_columns 1713
No_of_seqs 773 out of 3615
Neff 5.9
Searched_HMMs 29240
Date Tue Mar 26 17:18:18 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000292.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_70-74//hhsearch_pdb/000292hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3edt_B KLC 2, kinesin light ch 1.0 1 1 193.3 25.3 271 728-998 11-282 (283)
2 3nf1_A KLC 1, kinesin light ch 1.0 1 1 192.8 33.5 287 714-1000 23-310 (311)
3 3ulq_A Response regulator aspa 1.0 1 1 190.5 32.5 273 718-1009 103-378 (383)
4 3q15_A PSP28, response regulat 1.0 1 1 186.9 26.6 268 718-1003 101-371 (378)
5 4a1s_A PINS, partner of inscut 1.0 1 1 186.3 29.9 276 717-1002 85-377 (411)
6 3sf4_A G-protein-signaling mod 1.0 1 1 181.2 30.0 276 717-1002 46-341 (406)
7 4a1s_A PINS, partner of inscut 1.0 1 1 180.8 30.3 275 715-1002 45-337 (411)
8 3sf4_A G-protein-signaling mod 1.0 1 1 175.3 29.7 276 716-1001 85-381 (406)
9 3ro2_A PINS homolog, G-protein 1.0 1 1 174.0 29.3 276 717-1002 42-337 (338)
10 3n71_A Histone lysine methyltr 1.0 1 1 172.5 20.5 159 716-874 307-465 (490)
No 1
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=1.00 E-value=1 Score=193.32 Aligned_cols=271 Identities=21% Similarity=0.213 Sum_probs=219.7
Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf 99919979999999999999988409997338999999999998149999999999999999999509999114999999
Q 000292 728 ALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGD 807 (1713)
Q Consensus 728 ~l~qG~leeAlellqkAL~l~eqv~G~dhp~~A~al~~LA~iy~~lGd~eeAlel~qKAL~I~Er~lG~Dhp~ta~ay~n 807 (1713)
....|++++|+.++++|+.++.+..+.+++..+.++..+|.+|+.+|++++|+.++++++.+.++..+.+++....++.+
T Consensus 11 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 90 (283)
T 3edt_B 11 SSGLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNN 90 (283)
T ss_dssp --CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 47889778999999999999998639998789999999999999866699999999999999998738766699999988
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 99999990996999999999999999834999944999999999999988997999999999999988830999577999
Q 000292 808 LAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQRLLGPDHIQTAA 887 (1713)
Q Consensus 808 LA~iy~~lGqyeeALe~lekALeL~~~i~G~dhP~~a~il~NLA~iy~~lGk~eeAle~lekALei~ek~lG~d~~~tA~ 887 (1713)
+|.+|..+|++++|+.++.+++.+.....+++++....++.++|.+|..+|++++|+.++++++++.....+.+++..+.
T Consensus 91 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 170 (283)
T 3edt_B 91 LAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAK 170 (283)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHH
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf 99999981049999999999999999871999869999999999999985779999999999999999864999879999
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCC
Q ss_conf 999999999992891899999999999999961-9999999999999999999889999999933899952343039962
Q 000292 888 SYHAIAIALSLMEAYPLSVQHEQTTLQILRAKL-GPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASIASKGHLS 966 (1713)
Q Consensus 888 al~nLA~iy~~lGd~eeAle~lkkALeI~kk~L-G~dh~~t~ea~~~La~L~qka~e~AeAl~~~~~~~~~a~a~~~~~~ 966 (1713)
++.++|.+|..+|++++|+.++++++.+..... +..+.........+............+................+..
T Consensus 171 ~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (283)
T 3edt_B 171 TKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPT 250 (283)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------CCCCCCHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf 99999999998499788999999999998875388854368889999999986499636898899899999856878789
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 99999999999998799799999999999887
Q 000292 967 VSDLLDYINPSHDTKGRNVSTLKRKTYVAKVK 998 (1713)
Q Consensus 967 iaell~~LA~iy~~qGdyeEAl~yyeKALeL~ 998 (1713)
....+..+|.+|..+|++++|+.++++++++.
T Consensus 251 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 282 (283)
T 3edt_B 251 VNTTLRSLGALYRRQGKLEAAHTLEDCASRNR 282 (283)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 99999999999998688999999999998740
No 2
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=1.00 E-value=1 Score=192.79 Aligned_cols=287 Identities=22% Similarity=0.223 Sum_probs=233.8
Q ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 88999999999999999199799999999999999884099973389999999999981499999999999999999995
Q 000292 714 SSADGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERE 793 (1713)
Q Consensus 714 ~s~~A~~LlelA~~~l~qG~leeAlellqkAL~l~eqv~G~dhp~~A~al~~LA~iy~~lGd~eeAlel~qKAL~I~Er~ 793 (1713)
....+..++.+|..++..|++++|+.++++++.+.....+.+++..+.++..+|.+|..+|++++|+.++++++.+.++.
T Consensus 23 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 102 (311)
T 3nf1_A 23 IPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKT 102 (311)
T ss_dssp SCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 06899999999999998589999999999999999987089988999999999999997889999999999999999998
Q ss_pred CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 09999114999999999999909969999999999999998349999449999999999999889979999999999999
Q 000292 794 LGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKC 873 (1713)
Q Consensus 794 lG~Dhp~ta~ay~nLA~iy~~lGqyeeALe~lekALeL~~~i~G~dhP~~a~il~NLA~iy~~lGk~eeAle~lekALei 873 (1713)
.+.+++....++.++|.+|...|++++|+.++++++.+.....+.+++....++.++|.+|...|++++|+.++++++.+
T Consensus 103 ~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 182 (311)
T 3nf1_A 103 LGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEI 182 (311)
T ss_dssp HCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 08897599999999999999818699999999999999998658998189999999999999848979999999999999
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 8883099957799999999999999289189999999999999996-199999999999999999998899999999338
Q 000292 874 NQRLLGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAK-LGPDDLRTQDAAAWLEYFESKAFEQQEAARNGT 952 (1713)
Q Consensus 874 ~ek~lG~d~~~tA~al~nLA~iy~~lGd~eeAle~lkkALeI~kk~-LG~dh~~t~ea~~~La~L~qka~e~AeAl~~~~ 952 (1713)
..+..+.+++....++..+|.+|..+|++++|+.++++++.+.... ++............+..+.........+.....
T Consensus 183 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (311)
T 3nf1_A 183 YQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGE 262 (311)
T ss_dssp HHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCC
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 99881889788999999999999984898999999999999999855788993218999999999973275556888888
Q ss_pred CCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 999523430399629999999999999879979999999999988701
Q 000292 953 RKPDASIASKGHLSVSDLLDYINPSHDTKGRNVSTLKRKTYVAKVKGN 1000 (1713)
Q Consensus 953 ~~~~~a~a~~~~~~iaell~~LA~iy~~qGdyeEAl~yyeKALeL~dS 1000 (1713)
.................++..+|.+|..+|++++|+.+|++++++...
T Consensus 263 a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~~~ 310 (311)
T 3nf1_A 263 YGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSRKQ 310 (311)
T ss_dssp CC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
T ss_conf 888775037798039999999999999877999999999999998646
No 3
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=1.00 E-value=1 Score=190.55 Aligned_cols=273 Identities=11% Similarity=0.018 Sum_probs=219.5
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999999991997999999999999998840999733899999999999814999999999999999999950999
Q 000292 718 GRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLD 797 (1713)
Q Consensus 718 A~~LlelA~~~l~qG~leeAlellqkAL~l~eqv~G~dhp~~A~al~~LA~iy~~lGd~eeAlel~qKAL~I~Er~lG~D 797 (1713)
...++..|..++..|++++|+.++++|+.+.... ++.+..+.++..+|.+|+.+|++++|+.++++|+.+.+.. +..
T Consensus 103 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~-~~~ 179 (383)
T 3ulq_A 103 YYFNFFRGMYELDQREYLSAIKFFKKAESKLIFV--KDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEH-EAY 179 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGC--CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTC-STT
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC-CCC
T ss_conf 9999999999998669999999999999998609--9899999999999999998088799999999999999867-664
Q ss_pred CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 91149999999999999099699999999999999983499994499999999999998899799999999999998883
Q 000292 798 HPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQRL 877 (1713)
Q Consensus 798 hp~ta~ay~nLA~iy~~lGqyeeALe~lekALeL~~~i~G~dhP~~a~il~NLA~iy~~lGk~eeAle~lekALei~ek~ 877 (1713)
.+..+.++.++|.+|..+|++++|+.++++|+.+.... .+.+..+.++.++|.+|..+|++++|+.++++|+++....
T Consensus 180 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~ 257 (383)
T 3ulq_A 180 NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAE--KQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEES 257 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 37799899999999998548999999999999999874--9827899999999999987799999999999999989861
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH---HHHHHHHCCCC
Q ss_conf 099957799999999999999289189999999999999996199999999999999999998899---99999933899
Q 000292 878 LGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFE---QQEAARNGTRK 954 (1713)
Q Consensus 878 lG~d~~~tA~al~nLA~iy~~lGd~eeAle~lkkALeI~kk~LG~dh~~t~ea~~~La~L~qka~e---~AeAl~~~~~~ 954 (1713)
.+.+..+.++.++|.+|..+|++++|+.++++++.+...... +........++.+.....+ ..+++....
T Consensus 258 --~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~-- 330 (383)
T 3ulq_A 258 --NILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGD---VIYLSEFEFLKSLYLSGPDEEAIQGFFDFLE-- 330 (383)
T ss_dssp --TCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHH--
T ss_pred --CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH--
T ss_conf --655139999999999998879979999999999999988599---9999999999998838874999999999999--
Q ss_pred CCHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 9523430399629999999999999879979999999999988701037999889
Q 000292 955 PDASIASKGHLSVSDLLDYINPSHDTKGRNVSTLKRKTYVAKVKGNFYQDNNLTS 1009 (1713)
Q Consensus 955 ~~~a~a~~~~~~iaell~~LA~iy~~qGdyeEAl~yyeKALeL~dSL~q~~~ea~ 1009 (1713)
.........+++..+|.+|..+|++++|+.++++++++.+++. +.+.-
T Consensus 331 -----~~~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~~~~~i~--~~e~l 378 (383)
T 3ulq_A 331 -----SKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQ--GGVSL 378 (383)
T ss_dssp -----HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTSCS--SCCCC
T ss_pred -----HCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH--CCCHH
T ss_conf -----7768779999999999999978899999999999999998711--45302
No 4
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=1.00 E-value=1 Score=186.95 Aligned_cols=268 Identities=16% Similarity=0.061 Sum_probs=213.9
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999999991997999999999999998840999733899999999999814999999999999999999950999
Q 000292 718 GRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLD 797 (1713)
Q Consensus 718 A~~LlelA~~~l~qG~leeAlellqkAL~l~eqv~G~dhp~~A~al~~LA~iy~~lGd~eeAlel~qKAL~I~Er~lG~D 797 (1713)
...++..|..++..|++++|+.++++|+.+...+ .+.+..+.++..+|.+|+.+|++++|+.++++|+.+..+.. ..
T Consensus 101 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~-~~ 177 (378)
T 3q15_A 101 YYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFV--SDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHP-LY 177 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGC--CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTST-TC
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC-CC
T ss_conf 9999999999999778999999999999998658--89189999999999999981990999999999999998678-83
Q ss_pred CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 91149999999999999099699999999999999983499994499999999999998899799999999999998883
Q 000292 798 HPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQRL 877 (1713)
Q Consensus 798 hp~ta~ay~nLA~iy~~lGqyeeALe~lekALeL~~~i~G~dhP~~a~il~NLA~iy~~lGk~eeAle~lekALei~ek~ 877 (1713)
.+..+.++.+||.+|..+|++++|+.++++|+.+.... .+....+.++.++|.+|..+|++++|+.++++|+.+....
T Consensus 178 ~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~ 255 (378)
T 3q15_A 178 SIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDI--QNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREK 255 (378)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 06699999999999998578999999999999999986--9877899999989999987899999999999999988760
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH---HHHHHHHCCCC
Q ss_conf 099957799999999999999289189999999999999996199999999999999999998899---99999933899
Q 000292 878 LGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFE---QQEAARNGTRK 954 (1713)
Q Consensus 878 lG~d~~~tA~al~nLA~iy~~lGd~eeAle~lkkALeI~kk~LG~dh~~t~ea~~~La~L~qka~e---~AeAl~~~~~~ 954 (1713)
.++..+.++.++|.+|..+|++++|+.++++++.+......+.... ....+..+...... ..+++....
T Consensus 256 ---~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~---~~~~l~~ly~~~~~~~~~~~al~~~~-- 327 (378)
T 3q15_A 256 ---VPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKE---LFLFLQAVYKETVDERKIHDLLSYFE-- 327 (378)
T ss_dssp ---CGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTCCSCHHH---HHHHHHHHHSSSCCHHHHHHHHHHHH--
T ss_pred ---CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHH---HHHHHHHHHHCCCCHHHHHHHHHHHH--
T ss_conf ---8856999999999999988998999999999999998838988999---99999998708883999999999998--
Q ss_pred CCHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9523430399629999999999999879979999999999988701037
Q 000292 955 PDASIASKGHLSVSDLLDYINPSHDTKGRNVSTLKRKTYVAKVKGNFYQ 1003 (1713)
Q Consensus 955 ~~~a~a~~~~~~iaell~~LA~iy~~qGdyeEAl~yyeKALeL~dSL~q 1003 (1713)
.........+++..+|.+|..+|++++|+.+|++++++.+++..
T Consensus 328 -----~~~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~~~~~~~~ 371 (378)
T 3q15_A 328 -----KKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDILK 371 (378)
T ss_dssp -----HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred -----HCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf -----67883689999999999999879999999999999999999855
No 5
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=186.33 Aligned_cols=276 Identities=13% Similarity=0.085 Sum_probs=218.1
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999999999199799999999999999884099973389999999999981499999999999999999995099
Q 000292 717 DGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGL 796 (1713)
Q Consensus 717 ~A~~LlelA~~~l~qG~leeAlellqkAL~l~eqv~G~dhp~~A~al~~LA~iy~~lGd~eeAlel~qKAL~I~Er~lG~ 796 (1713)
.+..++.+|..++..|++++|+.++++++.+.... .+++..+.++..+|.+|..+|++++|+.++++++.+.... .
T Consensus 85 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~ 160 (411)
T 4a1s_A 85 LSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSM--NDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQL--G 160 (411)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--T
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH--H
T ss_conf 99999999999998789999999999999999871--5736799999999999998789999999999999999871--0
Q ss_pred CCCHHHHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 991149999999999999099-----------------699999999999999983499994499999999999998899
Q 000292 797 DHPDTMKSYGDLAVFYYRLQH-----------------TELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGN 859 (1713)
Q Consensus 797 Dhp~ta~ay~nLA~iy~~lGq-----------------yeeALe~lekALeL~~~i~G~dhP~~a~il~NLA~iy~~lGk 859 (1713)
+++....++.++|.+|..+|+ +++|+.++++++.+.... .+++..+.++.++|.+|..+|+
T Consensus 161 ~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~ 238 (411)
T 4a1s_A 161 DRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDL--GDRGAQGRACGNLGNTYYLLGD 238 (411)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCC
T ss_conf 44889999999999999837611133310011210699999999999999999973--8879999999999999998588
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 79999999999999888309995779999999999999928918999999999999999619999999999999999999
Q 000292 860 VHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFES 939 (1713)
Q Consensus 860 ~eeAle~lekALei~ek~lG~d~~~tA~al~nLA~iy~~lGd~eeAle~lkkALeI~kk~LG~dh~~t~ea~~~La~L~q 939 (1713)
+++|+.++++++++.... .+....+.++.++|.+|..+|++++|+.++++++.+.... .+..........++.+..
T Consensus 239 ~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~ 314 (411)
T 4a1s_A 239 FQAAIEHHQERLRIAREF--GDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVEL--GEREVEAQSCYSLGNTYT 314 (411)
T ss_dssp HHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHH
T ss_conf 299999999999999851--9967899999999999998768999999999999999876--987999999999999999
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 889999999933899952343039962999999999999987997999999999998870103
Q 000292 940 KAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPSHDTKGRNVSTLKRKTYVAKVKGNFY 1002 (1713)
Q Consensus 940 ka~e~AeAl~~~~~~~~~a~a~~~~~~iaell~~LA~iy~~qGdyeEAl~yyeKALeL~dSL~ 1002 (1713)
..++..++...............+.......+..+|.+|..+|++++|+.++++++++.++++
T Consensus 315 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 377 (411)
T 4a1s_A 315 LLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERALKYAEQHLQLAXXXX 377 (411)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
T ss_conf 818899999999999999998798588999999999999980569999999999999985100
No 6
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=1.00 E-value=1 Score=181.16 Aligned_cols=276 Identities=13% Similarity=0.088 Sum_probs=217.0
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999999999199799999999999999884099973389999999999981499999999999999999995099
Q 000292 717 DGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGL 796 (1713)
Q Consensus 717 ~A~~LlelA~~~l~qG~leeAlellqkAL~l~eqv~G~dhp~~A~al~~LA~iy~~lGd~eeAlel~qKAL~I~Er~lG~ 796 (1713)
.+..++.+|..++..|++++|+.++++++.+.... .+.+..+.++..+|.+|..+|++++|+.++++++.+.... .
T Consensus 46 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~ 121 (406)
T 3sf4_A 46 LSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI--GDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL--N 121 (406)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--T
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC--C
T ss_conf 99999999999998068999999999999999862--6667899999999999988479999999999999999865--3
Q ss_pred CCCHHHHHHHHHHHHHHHCCC--------------------HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 991149999999999999099--------------------699999999999999983499994499999999999998
Q 000292 797 DHPDTMKSYGDLAVFYYRLQH--------------------TELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEG 856 (1713)
Q Consensus 797 Dhp~ta~ay~nLA~iy~~lGq--------------------yeeALe~lekALeL~~~i~G~dhP~~a~il~NLA~iy~~ 856 (1713)
+......++.++|.+|...|+ +++|+.++.+++.+.... .+.+..+.++.++|.+|..
T Consensus 122 ~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~ 199 (406)
T 3sf4_A 122 DKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTAL--GDRAAQGRAFGNLGNTHYL 199 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHH
T ss_conf 21006899999999999739744444310000104667899999999999999999855--6747789999999999998
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 89979999999999999888309995779999999999999928918999999999999999619999999999999999
Q 000292 857 LGNVHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEY 936 (1713)
Q Consensus 857 lGk~eeAle~lekALei~ek~lG~d~~~tA~al~nLA~iy~~lGd~eeAle~lkkALeI~kk~LG~dh~~t~ea~~~La~ 936 (1713)
+|++++|+.++++++.+.... .+....+.++.++|.+|..+|++++|+.++++++.+.... .+..........++.
T Consensus 200 ~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~ 275 (406)
T 3sf4_A 200 LGNFRDAVIAHEQRLLIAKEF--GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQL--KDRAVEAQSCYSLGN 275 (406)
T ss_dssp HTBHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHH
T ss_conf 368999999999999999862--7858999999999999988499699999999999998857--676489999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 999889999999933899952343039962999999999999987997999999999998870103
Q 000292 937 FESKAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPSHDTKGRNVSTLKRKTYVAKVKGNFY 1002 (1713)
Q Consensus 937 L~qka~e~AeAl~~~~~~~~~a~a~~~~~~iaell~~LA~iy~~qGdyeEAl~yyeKALeL~dSL~ 1002 (1713)
+....++..++...............+......++..+|.+|..+|++++|+.++++++++...++
T Consensus 276 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 341 (406)
T 3sf4_A 276 TYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREVG 341 (406)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 999837699999999999999985578578999999999999986999999999999999999822
No 7
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=180.79 Aligned_cols=275 Identities=16% Similarity=0.140 Sum_probs=224.1
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCH-HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 8999999999999999199799999999999999884099973-389999999999981499999999999999999995
Q 000292 715 SADGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHR-MTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERE 793 (1713)
Q Consensus 715 s~~A~~LlelA~~~l~qG~leeAlellqkAL~l~eqv~G~dhp-~~A~al~~LA~iy~~lGd~eeAlel~qKAL~I~Er~ 793 (1713)
...+..++.+|..++..|++++|+.+|++++.+ .+.++ ..+.++..+|.+|+.+|++++|+.++++++.+.+..
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~-----~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 119 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQA-----GTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSM 119 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
T ss_conf 689999999999998827599999999999874-----645846899999999999998789999999999999999871
Q ss_pred CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC--------------
Q ss_conf 099991149999999999999099699999999999999983499994499999999999998899--------------
Q 000292 794 LGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGN-------------- 859 (1713)
Q Consensus 794 lG~Dhp~ta~ay~nLA~iy~~lGqyeeALe~lekALeL~~~i~G~dhP~~a~il~NLA~iy~~lGk-------------- 859 (1713)
.+++....++.++|.+|..+|++++|+.++++++.+.... .+++..+.++.++|.+|..+|+
T Consensus 120 --~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a 195 (411)
T 4a1s_A 120 --NDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQL--GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDV 195 (411)
T ss_dssp --TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHH
T ss_pred --CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH--HCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
T ss_conf --5736799999999999998789999999999999999871--044889999999999999837611133310011210
Q ss_pred ---HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf ---79999999999999888309995779999999999999928918999999999999999619999999999999999
Q 000292 860 ---VHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEY 936 (1713)
Q Consensus 860 ---~eeAle~lekALei~ek~lG~d~~~tA~al~nLA~iy~~lGd~eeAle~lkkALeI~kk~LG~dh~~t~ea~~~La~ 936 (1713)
+++|+.++++++++.... .+.+..+.++.++|.+|..+|++++|+.++++++.+.... .+..........++.
T Consensus 196 ~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~ 271 (411)
T 4a1s_A 196 KEALTRAVEFYQENLKLMRDL--GDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREF--GDRAAERRANSNLGN 271 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHH
T ss_conf 699999999999999999973--8879999999999999998588299999999999999851--996789999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 999889999999933899952343039962999999999999987997999999999998870103
Q 000292 937 FESKAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPSHDTKGRNVSTLKRKTYVAKVKGNFY 1002 (1713)
Q Consensus 937 L~qka~e~AeAl~~~~~~~~~a~a~~~~~~iaell~~LA~iy~~qGdyeEAl~yyeKALeL~dSL~ 1002 (1713)
+....++..++...............+......++..+|.+|..+|++++|+.++++++.+.....
T Consensus 272 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 337 (411)
T 4a1s_A 272 SHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELG 337 (411)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 999876899999999999999987698799999999999999981889999999999999999879
No 8
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=1.00 E-value=1 Score=175.31 Aligned_cols=276 Identities=15% Similarity=0.102 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC--------------------
Q ss_conf 999999999999999199799999999999999884099973389999999999981499--------------------
Q 000292 716 ADGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGD-------------------- 775 (1713)
Q Consensus 716 ~~A~~LlelA~~~l~qG~leeAlellqkAL~l~eqv~G~dhp~~A~al~~LA~iy~~lGd-------------------- 775 (1713)
..+..++.+|..+...|++++|+.++++++.+.... .+....+.++..+|.+|..+|+
T Consensus 85 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~ 162 (406)
T 3sf4_A 85 GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL--NDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDA 162 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 899999999999988479999999999999999865--321006899999999999739744444310000104667899
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999509999114999999999999909969999999999999998349999449999999999999
Q 000292 776 FNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEE 855 (1713)
Q Consensus 776 ~eeAlel~qKAL~I~Er~lG~Dhp~ta~ay~nLA~iy~~lGqyeeALe~lekALeL~~~i~G~dhP~~a~il~NLA~iy~ 855 (1713)
+++|+.++.+++.+.+.. .+.+....++.++|.+|..+|++++|+.++++++.+.... .+.+..+.++.++|.+|.
T Consensus 163 ~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~ 238 (406)
T 3sf4_A 163 LQAAVDFYEENLSLVTAL--GDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF--GDKAAERRAYSNLGNAYI 238 (406)
T ss_dssp HHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHH
T ss_conf 999999999999999855--6747789999999999998368999999999999999862--785899999999999998
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 88997999999999999988830999577999999999999992891899999999999999961999999999999999
Q 000292 856 GLGNVHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLE 935 (1713)
Q Consensus 856 ~lGk~eeAle~lekALei~ek~lG~d~~~tA~al~nLA~iy~~lGd~eeAle~lkkALeI~kk~LG~dh~~t~ea~~~La 935 (1713)
.+|++++|+.++++++.+.... .+....+.++..+|.+|...|++++|+.++++++.+.... .+......+...++
T Consensus 239 ~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~la 314 (406)
T 3sf4_A 239 FLGEFETASEYYKKTLLLARQL--KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL--NDRIGEGRACWSLG 314 (406)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHH
T ss_conf 8499699999999999998857--6764899999999999998376999999999999999855--78578999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHH
Q ss_conf 999988999999993389995234303996299999999999998799799-999999999887010
Q 000292 936 YFESKAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPSHDTKGRNVS-TLKRKTYVAKVKGNF 1001 (1713)
Q Consensus 936 ~L~qka~e~AeAl~~~~~~~~~a~a~~~~~~iaell~~LA~iy~~qGdyeE-Al~yyeKALeL~dSL 1001 (1713)
.+....++..++...............+.......+..++.+|...|+... +..+.+....+.+++
T Consensus 315 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l 381 (406)
T 3sf4_A 315 NAYTALGNHDQAMHFAEKHLEISREVGDKSGELTARLNLSDLQMVLGLSYSTNNSIMSENTEIDSSL 381 (406)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTSCC---------------
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999869999999999999999998228710368999999999986676877777788899999999
No 9
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=1.00 E-value=1 Score=174.03 Aligned_cols=276 Identities=13% Similarity=0.085 Sum_probs=204.9
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999999999199799999999999999884099973389999999999981499999999999999999995099
Q 000292 717 DGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGL 796 (1713)
Q Consensus 717 ~A~~LlelA~~~l~qG~leeAlellqkAL~l~eqv~G~dhp~~A~al~~LA~iy~~lGd~eeAlel~qKAL~I~Er~lG~ 796 (1713)
.+..+..+|..+...|++++|+.++++++.+.... .+.+..+.++..+|.+|..+|++++|+.++++++.+.... .
T Consensus 42 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~ 117 (338)
T 3ro2_A 42 LSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI--GDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL--N 117 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--T
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC--CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH--C
T ss_conf 99999999999999488899999999999986366--5527899999999999998569999999999999999873--6
Q ss_pred CCCHHHHHHHHHHHHHHHCCC--------------------HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 991149999999999999099--------------------699999999999999983499994499999999999998
Q 000292 797 DHPDTMKSYGDLAVFYYRLQH--------------------TELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEG 856 (1713)
Q Consensus 797 Dhp~ta~ay~nLA~iy~~lGq--------------------yeeALe~lekALeL~~~i~G~dhP~~a~il~NLA~iy~~ 856 (1713)
+......++.++|.+|...|+ +++|+.++++++.+.... .+.+....++.++|.+|..
T Consensus 118 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~ 195 (338)
T 3ro2_A 118 DKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTAL--GDRAAQGRAFGNLGNTHYL 195 (338)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHH
T ss_conf 86578999999999999807641110145542100568999999999999999998746--9789999999789999998
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 89979999999999999888309995779999999999999928918999999999999999619999999999999999
Q 000292 857 LGNVHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEY 936 (1713)
Q Consensus 857 lGk~eeAle~lekALei~ek~lG~d~~~tA~al~nLA~iy~~lGd~eeAle~lkkALeI~kk~LG~dh~~t~ea~~~La~ 936 (1713)
.|++++|+.++++++.+.... .+....+.++..+|.+|...|++++|+.++++++.+.... .+..........++.
T Consensus 196 ~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~ 271 (338)
T 3ro2_A 196 LGNFRDAVIAHEQRLLIAKEF--GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQL--KDRAVEAQSCYSLGN 271 (338)
T ss_dssp HTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HCCHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHH
T ss_conf 178999999999999999855--9859999999999999998188999999999999999850--356589999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 999889999999933899952343039962999999999999987997999999999998870103
Q 000292 937 FESKAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPSHDTKGRNVSTLKRKTYVAKVKGNFY 1002 (1713)
Q Consensus 937 L~qka~e~AeAl~~~~~~~~~a~a~~~~~~iaell~~LA~iy~~qGdyeEAl~yyeKALeL~dSL~ 1002 (1713)
+....++..++...............+......++..++.+|..+|++++|+.++++++++.++++
T Consensus 272 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 337 (338)
T 3ro2_A 272 TYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREVG 337 (338)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHC-----
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 999865899999999999999872389579999999999999986885899999999999987635
No 10
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=1.00 E-value=1 Score=172.48 Aligned_cols=159 Identities=18% Similarity=0.149 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999999919979999999999999988409997338999999999998149999999999999999999509
Q 000292 716 ADGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELG 795 (1713)
Q Consensus 716 ~~A~~LlelA~~~l~qG~leeAlellqkAL~l~eqv~G~dhp~~A~al~~LA~iy~~lGd~eeAlel~qKAL~I~Er~lG 795 (1713)
..+..+++.+..+..+|+|++|+.+++++|.+.++++|++|+.++.++.+||.+|..+|+|++|+.++++++.++++.+|
T Consensus 307 ~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG 386 (490)
T 3n71_A 307 QFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYH 386 (490)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999988678999999999999999987549978899999999999999834799999999999999998759
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 9991149999999999999099699999999999999983499994499999999999998899799999999999998
Q 000292 796 LDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCN 874 (1713)
Q Consensus 796 ~Dhp~ta~ay~nLA~iy~~lGqyeeALe~lekALeL~~~i~G~dhP~~a~il~NLA~iy~~lGk~eeAle~lekALei~ 874 (1713)
.+||.++..++|||.+|..+|+|++|+.+|++|+.+.+..+|++||.++.++.+++.++..++.|++|...|+++.+.+
T Consensus 387 ~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 387 HNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9878999999999999998789999999999999999998097986899999999999999998888999999999998
Done!