Query 000293
Match_columns 1712
No_of_seqs 591 out of 3220
Neff 5.0
Searched_HMMs 46136
Date Fri Mar 29 03:09:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000293.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/000293hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1838 Alpha/beta hydrolase [ 100.0 5.2E-61 1.1E-65 564.0 35.9 363 110-496 39-409 (409)
2 COG0429 Predicted hydrolase of 100.0 3.7E-46 8E-51 426.0 25.8 313 156-478 24-343 (345)
3 PLN02511 hydrolase 100.0 2.8E-43 6E-48 422.2 33.7 335 121-478 28-368 (388)
4 PRK10985 putative hydrolase; P 100.0 1.4E-37 3E-42 363.7 30.8 307 158-476 10-321 (324)
5 PLN02385 hydrolase; alpha/beta 99.8 7.5E-20 1.6E-24 216.3 24.0 277 183-476 58-346 (349)
6 PHA02857 monoglyceride lipase; 99.8 7.9E-20 1.7E-24 207.2 22.3 262 190-475 4-273 (276)
7 PLN02298 hydrolase, alpha/beta 99.8 1E-19 2.2E-24 212.8 23.5 277 183-475 29-317 (330)
8 COG2267 PldB Lysophospholipase 99.8 4.5E-18 9.7E-23 198.7 23.8 272 186-475 9-294 (298)
9 PRK10749 lysophospholipase L2; 99.8 4.6E-18 9.9E-23 200.0 23.8 270 189-474 33-328 (330)
10 PRK03592 haloalkane dehalogena 99.8 6.3E-18 1.4E-22 194.1 22.0 260 188-478 9-292 (295)
11 PLN02652 hydrolase; alpha/beta 99.8 1.1E-17 2.5E-22 202.2 24.8 268 185-476 109-388 (395)
12 PLN02824 hydrolase, alpha/beta 99.8 1.6E-17 3.4E-22 190.7 23.6 254 188-474 10-293 (294)
13 PRK13604 luxD acyl transferase 99.8 1.7E-17 3.7E-22 193.3 22.7 251 188-482 11-269 (307)
14 KOG1455 Lysophospholipase [Lip 99.8 9.2E-18 2E-22 191.8 19.4 277 183-474 24-311 (313)
15 PRK00870 haloalkane dehalogena 99.8 1.4E-17 3E-22 192.4 19.6 266 181-474 14-300 (302)
16 TIGR01607 PST-A Plasmodium sub 99.8 2.8E-17 6.1E-22 194.3 20.5 269 191-473 2-331 (332)
17 TIGR03343 biphenyl_bphD 2-hydr 99.8 6.9E-17 1.5E-21 182.7 22.6 237 215-473 29-281 (282)
18 TIGR01738 bioH putative pimelo 99.7 4.1E-17 8.9E-22 176.2 18.7 231 217-472 5-245 (245)
19 TIGR03056 bchO_mg_che_rel puta 99.7 1.1E-16 2.5E-21 179.0 21.6 238 216-473 28-278 (278)
20 TIGR02427 protocat_pcaD 3-oxoa 99.7 4.5E-17 9.7E-22 176.1 17.5 236 215-472 12-250 (251)
21 TIGR02240 PHA_depoly_arom poly 99.7 1E-16 2.3E-21 182.6 20.4 253 189-478 5-269 (276)
22 TIGR01250 pro_imino_pep_2 prol 99.7 6.3E-16 1.4E-20 171.5 25.7 256 194-473 9-288 (288)
23 TIGR03611 RutD pyrimidine util 99.7 1.1E-16 2.5E-21 175.2 19.1 237 215-473 12-256 (257)
24 PF12697 Abhydrolase_6: Alpha/ 99.7 2.3E-16 5E-21 167.3 20.6 209 219-456 1-220 (228)
25 TIGR03695 menH_SHCHC 2-succiny 99.7 1.6E-16 3.5E-21 171.0 18.3 236 216-472 1-250 (251)
26 PRK06489 hypothetical protein; 99.7 7.6E-16 1.6E-20 183.4 25.5 242 216-477 69-359 (360)
27 PRK03204 haloalkane dehalogena 99.7 8.7E-16 1.9E-20 177.3 24.6 264 184-472 12-285 (286)
28 PRK10349 carboxylesterase BioH 99.7 3.1E-16 6.7E-21 176.1 19.8 232 217-474 14-255 (256)
29 PLN02679 hydrolase, alpha/beta 99.7 1.9E-15 4.1E-20 180.4 24.9 239 215-476 87-358 (360)
30 PLN02578 hydrolase 99.7 2.2E-15 4.8E-20 179.2 25.3 243 215-473 85-353 (354)
31 COG1647 Esterase/lipase [Gener 99.7 4.3E-16 9.3E-21 171.4 16.7 225 216-473 15-242 (243)
32 PLN02965 Probable pheophorbida 99.7 9.4E-16 2E-20 173.1 20.0 236 218-476 5-254 (255)
33 PRK10673 acyl-CoA esterase; Pr 99.7 1.3E-15 2.9E-20 169.5 19.5 232 214-474 14-254 (255)
34 TIGR01249 pro_imino_pep_1 prol 99.7 2.3E-15 5E-20 175.1 20.9 126 187-326 5-130 (306)
35 PLN03087 BODYGUARD 1 domain co 99.7 4.5E-15 9.7E-20 183.2 24.5 133 184-327 174-310 (481)
36 PRK11126 2-succinyl-6-hydroxy- 99.7 1.2E-15 2.6E-20 168.9 17.5 228 216-474 2-241 (242)
37 PLN02872 triacylglycerol lipas 99.7 8.1E-16 1.8E-20 186.1 16.9 291 182-476 40-390 (395)
38 PRK05077 frsA fermentation/res 99.7 1E-14 2.2E-19 177.7 26.2 243 184-475 166-412 (414)
39 PRK07581 hypothetical protein; 99.7 4.1E-15 9E-20 175.0 21.8 251 216-476 41-337 (339)
40 TIGR03008 pepcterm_CAAX CAAX p 99.6 1.3E-14 2.9E-19 162.8 21.0 134 1510-1653 67-209 (222)
41 PLN02894 hydrolase, alpha/beta 99.6 3.2E-14 7E-19 172.7 24.8 105 215-325 104-210 (402)
42 TIGR03100 hydr1_PEP hydrolase, 99.6 2E-14 4.4E-19 165.4 21.6 235 216-473 26-273 (274)
43 PRK05855 short chain dehydroge 99.6 2.6E-14 5.7E-19 177.9 23.9 125 189-326 5-131 (582)
44 PRK08775 homoserine O-acetyltr 99.6 4.2E-15 9.1E-20 175.9 15.1 223 233-476 84-340 (343)
45 KOG4178 Soluble epoxide hydrol 99.6 2.3E-14 5E-19 166.3 17.7 248 214-476 42-321 (322)
46 TIGR01392 homoserO_Ac_trn homo 99.6 3.6E-14 7.8E-19 168.4 19.4 126 195-327 14-163 (351)
47 PRK00175 metX homoserine O-ace 99.6 6.4E-14 1.4E-18 168.6 21.1 105 216-327 48-183 (379)
48 PRK14875 acetoin dehydrogenase 99.6 4.9E-14 1.1E-18 166.2 18.9 232 215-474 130-370 (371)
49 TIGR01836 PHA_synth_III_C poly 99.6 3.1E-14 6.8E-19 169.0 17.0 106 216-330 62-175 (350)
50 KOG1454 Predicted hydrolase/ac 99.6 3.2E-14 7E-19 168.4 16.9 274 185-475 24-324 (326)
51 PF00561 Abhydrolase_1: alpha/ 99.6 2.5E-14 5.4E-19 154.8 13.5 205 246-456 1-219 (230)
52 PLN03084 alpha/beta hydrolase 99.6 2.7E-13 5.9E-18 163.8 23.7 128 184-327 102-233 (383)
53 PRK10566 esterase; Provisional 99.5 1.2E-13 2.6E-18 154.7 16.7 206 215-474 26-247 (249)
54 COG1506 DAP2 Dipeptidyl aminop 99.5 4.7E-13 1E-17 170.8 21.9 245 183-476 362-617 (620)
55 COG1266 Predicted metal-depend 99.5 5.5E-13 1.2E-17 146.8 19.3 83 1568-1651 126-212 (226)
56 PLN02211 methyl indole-3-aceta 99.5 8.8E-13 1.9E-17 152.0 20.6 106 214-325 16-121 (273)
57 PF02517 Abi: CAAX protease se 99.5 8.2E-14 1.8E-18 134.6 9.7 83 1568-1651 7-90 (91)
58 KOG4409 Predicted hydrolase/ac 99.5 5.3E-12 1.2E-16 147.4 22.7 137 182-329 61-197 (365)
59 PLN02980 2-oxoglutarate decarb 99.4 9.4E-12 2E-16 173.0 26.4 240 215-478 1370-1642(1655)
60 TIGR00976 /NonD putative hydro 99.4 3.6E-12 7.8E-17 160.6 20.3 133 191-331 1-137 (550)
61 PF00326 Peptidase_S9: Prolyl 99.4 1.5E-12 3.2E-17 143.6 14.2 193 237-476 6-210 (213)
62 PF12695 Abhydrolase_5: Alpha/ 99.4 3.1E-12 6.7E-17 130.7 15.4 143 218-452 1-145 (145)
63 KOG1552 Predicted alpha/beta h 99.4 5.3E-12 1.2E-16 142.8 18.3 210 191-476 40-253 (258)
64 PRK11071 esterase YqiA; Provis 99.4 7.4E-12 1.6E-16 137.6 16.9 91 217-328 2-95 (190)
65 TIGR03101 hydr2_PEP hydrolase, 99.4 1E-11 2.2E-16 143.6 16.7 131 190-328 4-136 (266)
66 PRK06765 homoserine O-acetyltr 99.3 6.1E-11 1.3E-15 143.9 21.0 130 191-326 30-196 (389)
67 TIGR01838 PHA_synth_I poly(R)- 99.3 1.6E-11 3.4E-16 153.6 14.6 109 215-330 187-306 (532)
68 KOG2984 Predicted hydrolase [G 99.3 1.5E-11 3.2E-16 133.7 10.9 228 217-474 43-275 (277)
69 KOG4391 Predicted alpha/beta h 99.3 5.7E-11 1.2E-15 130.3 14.4 230 181-477 49-284 (300)
70 PRK07868 acyl-CoA synthetase; 99.3 1.3E-10 2.9E-15 155.7 20.8 251 215-477 66-363 (994)
71 PRK10115 protease 2; Provision 99.2 3E-10 6.6E-15 146.7 21.4 223 185-455 415-656 (686)
72 PF01738 DLH: Dienelactone hyd 99.2 1.5E-10 3.3E-15 128.5 14.0 183 214-474 12-216 (218)
73 KOG4667 Predicted esterase [Li 99.2 2E-10 4.3E-15 126.4 13.8 208 214-456 31-243 (269)
74 PLN02442 S-formylglutathione h 99.2 1.6E-09 3.4E-14 126.2 22.0 190 215-454 46-264 (283)
75 COG2945 Predicted hydrolase of 99.2 5.1E-10 1.1E-14 121.9 16.1 175 214-473 26-205 (210)
76 PLN00021 chlorophyllase 99.2 7.6E-10 1.7E-14 130.9 19.0 104 214-326 50-166 (313)
77 TIGR02821 fghA_ester_D S-formy 99.1 4.5E-09 9.8E-14 121.5 22.0 111 215-328 41-175 (275)
78 PF02129 Peptidase_S15: X-Pro 99.1 6.9E-10 1.5E-14 127.9 14.9 130 195-330 1-140 (272)
79 PF06500 DUF1100: Alpha/beta h 99.1 1.6E-09 3.6E-14 130.8 17.6 232 184-475 163-409 (411)
80 PRK11460 putative hydrolase; P 99.1 3.3E-09 7.2E-14 120.1 19.2 190 214-490 14-228 (232)
81 COG0596 MhpC Predicted hydrola 99.1 3.5E-09 7.7E-14 112.5 18.3 102 216-327 21-124 (282)
82 TIGR01840 esterase_phb esteras 99.1 1.8E-09 3.8E-14 120.0 15.9 109 214-326 11-130 (212)
83 KOG2382 Predicted alpha/beta h 99.1 1.6E-09 3.4E-14 126.6 15.9 239 213-475 49-313 (315)
84 COG4757 Predicted alpha/beta h 99.0 1.7E-09 3.7E-14 120.4 12.5 109 189-304 8-120 (281)
85 COG0412 Dienelactone hydrolase 99.0 1.6E-08 3.5E-13 115.4 20.2 202 189-476 5-234 (236)
86 PF05448 AXE1: Acetyl xylan es 99.0 2.2E-08 4.7E-13 119.0 21.5 240 181-474 51-319 (320)
87 TIGR01839 PHA_synth_II poly(R) 99.0 3.1E-09 6.6E-14 132.6 13.8 228 214-457 213-487 (560)
88 PRK10162 acetyl esterase; Prov 99.0 5.4E-08 1.2E-12 115.2 23.3 131 184-328 55-197 (318)
89 KOG2624 Triglyceride lipase-ch 99.0 5E-09 1.1E-13 127.1 14.5 287 183-476 45-399 (403)
90 PRK05371 x-prolyl-dipeptidyl a 98.9 3.2E-08 7E-13 129.3 19.2 227 236-478 270-522 (767)
91 TIGR03502 lipase_Pla1_cef extr 98.9 1.7E-07 3.7E-12 121.4 24.3 119 190-310 421-576 (792)
92 PF08538 DUF1749: Protein of u 98.8 2.4E-08 5.2E-13 116.8 13.3 244 215-473 32-303 (303)
93 TIGR03230 lipo_lipase lipoprot 98.8 2.2E-08 4.7E-13 123.0 13.6 109 215-325 40-153 (442)
94 TIGR01849 PHB_depoly_PhaZ poly 98.8 9.5E-08 2.1E-12 116.4 17.4 108 216-330 102-212 (406)
95 cd00707 Pancreat_lipase_like P 98.8 1.8E-08 3.9E-13 117.2 9.9 109 215-326 35-147 (275)
96 COG3458 Acetyl esterase (deace 98.7 1.5E-07 3.2E-12 107.3 15.6 239 182-474 52-316 (321)
97 KOG2564 Predicted acetyltransf 98.7 3.2E-08 6.9E-13 112.8 10.0 106 214-323 72-179 (343)
98 COG2936 Predicted acyl esteras 98.7 1.7E-07 3.7E-12 116.9 15.8 140 185-331 18-164 (563)
99 PF07859 Abhydrolase_3: alpha/ 98.7 3.4E-08 7.4E-13 108.4 8.4 102 219-328 1-112 (211)
100 COG2021 MET2 Homoserine acetyl 98.7 7.7E-07 1.7E-11 105.9 19.4 112 215-328 50-184 (368)
101 PF02230 Abhydrolase_2: Phosph 98.6 3.9E-07 8.4E-12 101.8 15.2 181 213-475 11-215 (216)
102 PF02273 Acyl_transf_2: Acyl t 98.6 1.1E-06 2.5E-11 99.1 17.1 228 188-451 4-236 (294)
103 COG3571 Predicted hydrolase of 98.5 1.2E-06 2.6E-11 93.5 14.3 164 216-452 14-181 (213)
104 COG0657 Aes Esterase/lipase [L 98.5 3.2E-06 6.9E-11 99.4 19.0 130 192-330 57-195 (312)
105 PF06821 Ser_hydrolase: Serine 98.5 1E-06 2.2E-11 96.2 13.1 89 219-326 1-91 (171)
106 KOG2100 Dipeptidyl aminopeptid 98.5 1.7E-06 3.7E-11 113.3 17.3 234 182-473 496-745 (755)
107 KOG4130 Prenyl protein proteas 98.5 2.8E-06 6.1E-11 95.0 16.3 79 1571-1650 134-233 (291)
108 PF06342 DUF1057: Alpha/beta h 98.4 1.2E-05 2.6E-10 93.2 20.2 133 190-332 10-144 (297)
109 PF06057 VirJ: Bacterial virul 98.4 1.6E-06 3.6E-11 95.7 10.7 103 217-326 3-107 (192)
110 KOG2281 Dipeptidyl aminopeptid 98.4 4.4E-06 9.5E-11 103.4 14.7 236 182-474 606-866 (867)
111 PF12146 Hydrolase_4: Putative 98.3 2E-06 4.3E-11 82.8 8.6 63 215-279 15-78 (79)
112 COG3243 PhaC Poly(3-hydroxyalk 98.3 2.9E-06 6.3E-11 102.2 11.4 254 215-477 106-401 (445)
113 PF05728 UPF0227: Uncharacteri 98.3 3E-05 6.5E-10 86.1 18.1 92 219-330 2-95 (187)
114 PF00975 Thioesterase: Thioest 98.3 2.5E-05 5.5E-10 86.8 17.7 102 217-326 1-104 (229)
115 KOG3043 Predicted hydrolase re 98.3 4.5E-06 9.7E-11 93.6 11.2 179 217-475 40-240 (242)
116 COG3208 GrsT Predicted thioest 98.2 1.3E-05 2.9E-10 91.2 14.6 87 215-311 6-96 (244)
117 PF12715 Abhydrolase_7: Abhydr 98.2 1.2E-06 2.6E-11 105.1 6.6 137 185-328 87-262 (390)
118 PF10230 DUF2305: Uncharacteri 98.2 2.9E-05 6.4E-10 90.4 17.0 108 216-327 2-123 (266)
119 PF06028 DUF915: Alpha/beta hy 98.2 1E-05 2.2E-10 93.7 13.0 115 215-331 10-148 (255)
120 PF09752 DUF2048: Uncharacteri 98.2 4.7E-05 1E-09 91.0 17.5 106 215-324 91-208 (348)
121 PF03583 LIP: Secretory lipase 98.1 0.00012 2.6E-09 86.3 20.1 95 232-333 13-120 (290)
122 PF07819 PGAP1: PGAP1-like pro 98.1 1.9E-05 4E-10 90.0 12.2 110 215-329 3-126 (225)
123 PLN02733 phosphatidylcholine-s 98.0 2E-05 4.4E-10 97.6 11.5 98 230-330 106-205 (440)
124 COG4188 Predicted dienelactone 98.0 9.6E-06 2.1E-10 97.0 7.3 94 215-311 70-181 (365)
125 COG0400 Predicted esterase [Ge 98.0 0.0001 2.2E-09 83.2 14.5 103 214-324 16-132 (207)
126 KOG2931 Differentiation-relate 97.9 0.0026 5.6E-08 74.4 23.7 221 186-425 22-260 (326)
127 PF03096 Ndr: Ndr family; Int 97.9 0.00053 1.1E-08 80.4 18.1 132 189-329 2-137 (283)
128 KOG1515 Arylacetamide deacetyl 97.9 0.00053 1.2E-08 82.5 18.7 129 194-330 69-211 (336)
129 PF10503 Esterase_phd: Esteras 97.8 0.00019 4.2E-09 81.7 13.1 108 215-325 15-131 (220)
130 PF12740 Chlorophyllase2: Chlo 97.8 0.00014 3E-09 84.3 11.7 106 212-326 13-131 (259)
131 PF01674 Lipase_2: Lipase (cla 97.7 2.1E-05 4.5E-10 89.4 3.4 91 217-309 2-95 (219)
132 PF08840 BAAT_C: BAAT / Acyl-C 97.6 0.00012 2.7E-09 82.5 8.1 54 274-330 5-60 (213)
133 PF05990 DUF900: Alpha/beta hy 97.6 0.00041 8.8E-09 79.6 11.6 113 215-328 17-139 (233)
134 COG3545 Predicted esterase of 97.6 0.0011 2.4E-08 72.7 14.0 92 217-326 3-94 (181)
135 PF07224 Chlorophyllase: Chlor 97.6 0.00024 5.3E-09 81.6 9.3 108 212-328 42-159 (307)
136 PF00151 Lipase: Lipase; Inte 97.5 7.6E-05 1.6E-09 89.7 5.1 106 214-325 69-186 (331)
137 PF03403 PAF-AH_p_II: Platelet 97.5 0.00022 4.8E-09 87.2 8.7 107 214-325 98-261 (379)
138 PF03959 FSH1: Serine hydrolas 97.5 0.00053 1.2E-08 77.2 11.0 107 216-325 4-144 (212)
139 KOG1553 Predicted alpha/beta h 97.5 0.00032 6.9E-09 82.4 9.0 131 184-327 212-345 (517)
140 KOG3253 Predicted alpha/beta h 97.5 0.00036 7.9E-09 86.7 9.9 191 216-478 176-377 (784)
141 PF05677 DUF818: Chlamydia CHL 97.4 0.0011 2.3E-08 79.1 12.4 117 185-310 111-236 (365)
142 COG1770 PtrB Protease II [Amin 97.4 0.0014 3E-08 83.2 13.8 228 187-457 420-661 (682)
143 KOG4627 Kynurenine formamidase 97.4 0.00031 6.7E-09 78.1 6.9 123 195-331 52-177 (270)
144 COG4449 Predicted protease of 97.3 0.00014 3E-09 87.5 3.5 79 1573-1652 717-812 (827)
145 COG3509 LpqC Poly(3-hydroxybut 97.3 0.0018 3.9E-08 75.9 12.2 126 195-326 43-179 (312)
146 KOG2237 Predicted serine prote 97.2 0.0022 4.7E-08 80.9 12.2 139 187-329 442-587 (712)
147 PF00756 Esterase: Putative es 97.1 0.0019 4E-08 73.3 9.8 113 214-329 22-153 (251)
148 KOG4840 Predicted hydrolases o 97.1 0.0044 9.5E-08 69.9 12.2 107 216-329 36-147 (299)
149 COG4814 Uncharacterized protei 97.1 0.0025 5.4E-08 73.2 9.8 109 217-327 46-177 (288)
150 KOG3975 Uncharacterized conser 97.1 0.037 8.1E-07 63.8 19.0 111 214-326 27-147 (301)
151 PF05705 DUF829: Eukaryotic pr 97.0 0.014 3E-07 66.7 15.6 217 219-471 2-239 (240)
152 COG3319 Thioesterase domains o 97.0 0.0039 8.5E-08 72.7 10.8 102 217-327 1-104 (257)
153 PF05057 DUF676: Putative seri 96.9 0.0028 6E-08 71.9 8.4 41 289-329 78-128 (217)
154 cd00312 Esterase_lipase Estera 96.9 0.0022 4.8E-08 80.3 8.4 127 196-327 76-214 (493)
155 PRK04940 hypothetical protein; 96.9 0.023 5E-07 63.2 15.2 36 289-329 60-95 (180)
156 COG4782 Uncharacterized protei 96.8 0.0052 1.1E-07 73.9 10.2 91 215-309 115-211 (377)
157 KOG3847 Phospholipase A2 (plat 96.8 0.0046 9.9E-08 72.7 9.3 105 213-322 115-271 (399)
158 PTZ00472 serine carboxypeptida 96.7 0.017 3.8E-07 72.6 14.6 142 184-328 45-218 (462)
159 PRK10252 entF enterobactin syn 96.7 0.005 1.1E-07 85.6 10.4 101 215-324 1067-1169(1296)
160 PF11339 DUF3141: Protein of u 96.6 0.19 4.1E-06 63.3 21.5 83 237-330 92-179 (581)
161 COG1073 Hydrolases of the alph 96.5 0.012 2.6E-07 66.6 10.1 73 403-475 222-297 (299)
162 KOG3724 Negative regulator of 96.3 0.065 1.4E-06 69.4 15.8 103 215-327 88-221 (973)
163 PF05577 Peptidase_S28: Serine 96.3 0.025 5.5E-07 70.2 12.3 110 216-329 29-151 (434)
164 PF02450 LCAT: Lecithin:choles 96.2 0.01 2.2E-07 73.1 8.1 88 233-329 66-163 (389)
165 COG1505 Serine proteases of th 96.1 0.027 5.9E-07 71.2 11.2 140 184-328 392-537 (648)
166 PF00135 COesterase: Carboxyle 96.1 0.012 2.6E-07 73.7 8.4 128 197-326 107-245 (535)
167 PRK10439 enterobactin/ferric e 96.1 0.051 1.1E-06 67.6 13.1 105 215-326 208-323 (411)
168 PF12048 DUF3530: Protein of u 96.1 0.099 2.1E-06 62.8 15.0 109 215-326 86-229 (310)
169 COG4099 Predicted peptidase [G 96.0 0.057 1.2E-06 63.6 11.8 128 192-328 167-306 (387)
170 KOG2551 Phospholipase/carboxyh 96.0 0.17 3.8E-06 57.8 15.3 64 408-478 159-223 (230)
171 smart00824 PKS_TE Thioesterase 95.9 0.057 1.2E-06 58.1 10.9 84 234-324 15-100 (212)
172 COG1075 LipA Predicted acetylt 95.8 0.021 4.5E-07 69.2 8.1 108 216-331 59-169 (336)
173 KOG3967 Uncharacterized conser 95.5 0.13 2.8E-06 58.1 11.7 115 216-331 101-232 (297)
174 KOG2565 Predicted hydrolases o 95.4 0.076 1.6E-06 64.1 10.1 93 216-313 152-253 (469)
175 PLN02606 palmitoyl-protein thi 94.8 0.89 1.9E-05 54.6 16.8 108 216-330 26-136 (306)
176 PLN02633 palmitoyl protein thi 94.5 1.3 2.7E-05 53.4 17.2 107 216-330 25-135 (314)
177 cd00741 Lipase Lipase. Lipase 94.5 0.096 2.1E-06 55.8 7.3 54 273-326 12-67 (153)
178 KOG1551 Uncharacterized conser 94.4 0.42 9.1E-06 55.7 12.4 58 416-477 310-368 (371)
179 PF10340 DUF2424: Protein of u 94.3 0.21 4.6E-06 61.3 10.6 108 215-329 121-238 (374)
180 COG2272 PnbA Carboxylesterase 93.8 0.11 2.3E-06 65.2 6.7 112 215-327 93-218 (491)
181 KOG3101 Esterase D [General fu 93.7 0.28 6.2E-06 55.6 9.1 113 216-329 44-182 (283)
182 KOG2112 Lysophospholipase [Lip 93.5 0.68 1.5E-05 52.7 11.8 56 412-474 144-203 (206)
183 PF01764 Lipase_3: Lipase (cla 93.5 0.17 3.6E-06 52.6 6.6 37 273-309 48-84 (140)
184 PLN02517 phosphatidylcholine-s 93.3 0.096 2.1E-06 67.0 5.4 88 234-328 158-265 (642)
185 PF00450 Peptidase_S10: Serine 93.2 0.81 1.8E-05 56.0 13.0 139 189-330 14-185 (415)
186 cd00519 Lipase_3 Lipase (class 92.9 0.2 4.3E-06 57.0 6.5 38 273-310 112-149 (229)
187 KOG2369 Lecithin:cholesterol a 92.7 0.076 1.6E-06 66.0 3.2 92 232-328 124-227 (473)
188 COG2819 Predicted hydrolase of 92.2 2.4 5.1E-05 50.2 14.2 45 280-326 126-172 (264)
189 KOG2183 Prolylcarboxypeptidase 91.2 0.61 1.3E-05 57.5 8.2 109 217-331 81-207 (492)
190 PF06259 Abhydrolase_8: Alpha/ 90.9 2.8 6.1E-05 46.9 12.4 106 216-325 19-143 (177)
191 PF08386 Abhydrolase_4: TAP-li 90.0 0.62 1.3E-05 47.3 5.9 58 412-473 34-92 (103)
192 PF01083 Cutinase: Cutinase; 89.3 0.47 1E-05 52.7 4.9 56 272-327 64-123 (179)
193 PF10086 DUF2324: Putative mem 89.2 4.1 8.8E-05 47.2 12.4 42 1568-1613 64-105 (223)
194 COG3150 Predicted esterase [Ge 89.0 1.6 3.5E-05 48.4 8.4 80 219-311 2-81 (191)
195 PF04301 DUF452: Protein of un 88.7 5.6 0.00012 45.9 12.9 78 216-325 11-89 (213)
196 PF11187 DUF2974: Protein of u 88.7 0.82 1.8E-05 52.8 6.5 51 274-325 70-122 (224)
197 PF04083 Abhydro_lipase: Parti 88.6 0.94 2E-05 42.5 5.6 46 184-229 10-56 (63)
198 PF11144 DUF2920: Protein of u 88.6 2.6 5.6E-05 52.5 10.8 47 272-320 163-213 (403)
199 COG3946 VirJ Type IV secretory 88.0 1.2 2.6E-05 55.0 7.3 81 216-303 260-340 (456)
200 PLN02454 triacylglycerol lipas 87.2 1.1 2.3E-05 55.9 6.6 38 272-309 209-248 (414)
201 PLN02209 serine carboxypeptida 85.3 5.8 0.00013 50.3 11.7 137 189-328 42-214 (437)
202 PLN00413 triacylglycerol lipas 85.2 1.7 3.7E-05 54.9 6.9 35 274-308 269-303 (479)
203 PLN02162 triacylglycerol lipas 85.1 1.8 4E-05 54.6 7.1 53 273-325 262-320 (475)
204 PF11288 DUF3089: Protein of u 84.8 1.5 3.3E-05 50.1 5.7 84 243-326 43-136 (207)
205 COG0627 Predicted esterase [Ge 83.9 2.6 5.6E-05 51.2 7.5 38 290-329 153-190 (316)
206 PLN03016 sinapoylglucose-malat 83.9 9 0.0002 48.5 12.5 112 214-326 64-209 (433)
207 COG1230 CzcD Co/Zn/Cd efflux s 83.7 69 0.0015 39.0 18.9 53 1580-1633 152-205 (296)
208 KOG1516 Carboxylesterase and r 83.1 0.95 2.1E-05 58.0 3.7 124 197-325 95-231 (545)
209 PLN02934 triacylglycerol lipas 83.1 2.1 4.4E-05 54.6 6.3 37 273-309 305-341 (515)
210 PRK00068 hypothetical protein; 83.0 15 0.00032 50.5 14.5 15 1638-1652 206-220 (970)
211 PF10142 PhoPQ_related: PhoPQ- 83.0 13 0.00029 46.1 13.1 68 402-476 252-321 (367)
212 COG2339 prsW Membrane proteina 82.3 56 0.0012 39.3 17.2 14 1569-1582 108-121 (274)
213 KOG2541 Palmitoyl protein thio 82.3 6.8 0.00015 46.5 9.6 105 217-329 24-131 (296)
214 PRK04214 rbn ribonuclease BN/u 82.3 36 0.00079 42.9 16.8 60 1379-1439 86-147 (412)
215 COG1295 Rbn Ribonuclease BN fa 82.0 27 0.00059 42.2 15.0 44 1387-1431 95-140 (303)
216 PLN02408 phospholipase A1 80.4 2.8 6.1E-05 51.7 6.1 38 273-310 182-221 (365)
217 KOG2182 Hydrolytic enzymes of 79.7 6.6 0.00014 49.9 8.9 91 237-329 110-210 (514)
218 KOG4540 Putative lipase essent 79.6 3.1 6.6E-05 49.3 5.7 53 272-329 259-311 (425)
219 COG5153 CVT17 Putative lipase 79.6 3.1 6.6E-05 49.3 5.7 53 272-329 259-311 (425)
220 PF03631 Virul_fac_BrkB: Virul 79.3 96 0.0021 36.2 18.0 61 1378-1439 57-120 (260)
221 PF02089 Palm_thioest: Palmito 79.3 1.6 3.4E-05 52.0 3.4 40 289-329 80-119 (279)
222 PF05297 Herpes_LMP1: Herpesvi 79.0 0.62 1.4E-05 54.5 0.0 28 1472-1504 109-136 (381)
223 TIGR00766 ribonuclease, putati 77.9 61 0.0013 38.2 15.9 53 1380-1433 70-126 (263)
224 PRK10263 DNA translocase FtsK; 77.5 9.6 0.00021 53.5 10.2 13 1601-1613 122-134 (1355)
225 PRK12438 hypothetical protein; 77.5 24 0.00052 48.7 13.7 14 1638-1651 204-217 (991)
226 PLN02847 triacylglycerol lipas 77.2 3.8 8.3E-05 53.1 6.1 36 274-309 236-271 (633)
227 PF07082 DUF1350: Protein of u 76.9 18 0.00039 42.7 10.9 79 233-322 35-121 (250)
228 PLN02571 triacylglycerol lipas 76.7 3.3 7.2E-05 51.9 5.2 37 273-309 208-246 (413)
229 KOG4372 Predicted alpha/beta h 76.0 4.3 9.4E-05 50.4 5.8 83 215-303 79-164 (405)
230 TIGR00765 yihY_not_rbn YihY fa 75.4 92 0.002 36.7 16.4 59 1379-1438 69-129 (259)
231 PF03699 UPF0182: Uncharacteri 73.6 35 0.00076 46.3 13.6 12 1641-1652 197-208 (774)
232 KOG4569 Predicted lipase [Lipi 73.5 4.7 0.0001 49.3 5.4 43 267-309 149-191 (336)
233 PRK10263 DNA translocase FtsK; 73.5 34 0.00074 48.5 13.7 19 1595-1613 142-160 (1355)
234 PRK12438 hypothetical protein; 72.4 87 0.0019 43.6 16.8 32 1510-1541 167-200 (991)
235 TIGR02916 PEP_his_kin putative 71.5 1E+02 0.0022 41.2 17.4 26 1391-1416 27-52 (679)
236 PLN02324 triacylglycerol lipas 69.9 6 0.00013 49.6 5.2 37 273-309 197-235 (415)
237 PF11700 ATG22: Vacuole efflux 69.4 64 0.0014 41.5 14.3 24 1683-1706 449-472 (477)
238 PF06609 TRI12: Fungal trichot 69.0 1.6E+02 0.0035 39.3 17.9 44 1568-1611 280-325 (599)
239 PLN02719 triacylglycerol lipas 68.5 6.6 0.00014 50.3 5.2 37 273-309 277-318 (518)
240 PLN03037 lipase class 3 family 68.4 7.1 0.00015 50.1 5.5 35 275-309 300-338 (525)
241 PLN02802 triacylglycerol lipas 67.2 7.3 0.00016 49.9 5.2 38 273-310 312-351 (509)
242 PLN02310 triacylglycerol lipas 67.0 6.5 0.00014 49.2 4.7 36 274-309 190-229 (405)
243 COG2382 Fes Enterochelin ester 65.7 9.4 0.0002 46.0 5.5 106 214-326 96-212 (299)
244 COG4553 DepA Poly-beta-hydroxy 65.5 91 0.002 37.9 13.1 254 216-478 103-410 (415)
245 PRK07668 hypothetical protein; 65.4 2.1E+02 0.0045 34.3 16.2 28 1511-1538 140-167 (254)
246 COG4232 Thiol:disulfide interc 65.4 1.1E+02 0.0025 40.1 15.1 21 1432-1452 171-191 (569)
247 PLN02761 lipase class 3 family 65.3 8.3 0.00018 49.6 5.2 37 273-309 272-314 (527)
248 PF05297 Herpes_LMP1: Herpesvi 64.5 2.2 4.7E-05 50.3 0.0 14 1426-1439 18-31 (381)
249 COG4377 Predicted membrane pro 64.4 59 0.0013 37.3 10.8 39 1572-1615 84-122 (258)
250 PLN02753 triacylglycerol lipas 64.3 8.9 0.00019 49.3 5.2 37 273-309 291-332 (531)
251 TIGR03109 exosortase_1 exosort 64.0 1.5E+02 0.0033 35.6 15.0 20 1615-1634 180-199 (267)
252 KOG1278 Endosomal membrane pro 63.5 1.7E+02 0.0038 38.3 15.8 161 1468-1649 434-615 (628)
253 COG2830 Uncharacterized protei 62.0 71 0.0015 35.8 10.6 75 217-323 12-87 (214)
254 COG1480 Predicted membrane-ass 61.2 3.2E+02 0.007 36.8 18.0 17 1354-1370 227-243 (700)
255 PRK10929 putative mechanosensi 61.0 1.1E+02 0.0025 43.3 15.0 19 1148-1166 266-284 (1109)
256 PRK01637 hypothetical protein; 60.8 3.6E+02 0.0079 32.4 17.6 37 1396-1433 95-133 (286)
257 PRK05771 V-type ATP synthase s 58.6 1.6E+02 0.0035 39.3 15.5 44 1348-1397 321-373 (646)
258 PRK09928 choline transport pro 57.3 38 0.00082 45.3 9.2 45 1599-1643 134-178 (679)
259 PRK11281 hypothetical protein; 56.7 3.1E+02 0.0067 39.3 18.0 19 1148-1166 286-304 (1113)
260 KOG2521 Uncharacterized conser 56.6 1.2E+02 0.0026 37.8 12.7 107 218-328 40-154 (350)
261 PF03699 UPF0182: Uncharacteri 56.1 2.6E+02 0.0057 38.4 16.6 15 1476-1490 59-73 (774)
262 PLN02213 sinapoylglucose-malat 55.8 28 0.0006 42.3 7.3 79 247-326 3-95 (319)
263 PRK03612 spermidine synthase; 53.1 4.7E+02 0.01 34.3 18.0 48 1566-1613 119-170 (521)
264 COG2939 Carboxypeptidase C (ca 52.7 36 0.00078 43.7 7.6 97 214-310 99-219 (498)
265 PF05277 DUF726: Protein of un 51.7 26 0.00057 43.3 6.2 43 287-329 218-263 (345)
266 TIGR02921 PEP_integral PEP-CTE 51.0 1.7E+02 0.0038 38.3 12.9 20 1636-1655 182-201 (952)
267 PRK10921 twin-arginine protein 50.4 5.2E+02 0.011 31.0 19.8 68 1569-1642 165-233 (258)
268 KOG4388 Hormone-sensitive lipa 50.3 40 0.00086 43.8 7.3 83 216-308 396-488 (880)
269 PRK09509 fieF ferrous iron eff 50.3 5.3E+02 0.012 31.1 17.6 14 1511-1524 78-91 (299)
270 PLN02436 cellulose synthase A 50.1 2.3E+02 0.0051 39.9 14.8 18 1402-1419 851-868 (1094)
271 PF13367 PrsW-protease: Protea 48.9 56 0.0012 36.6 7.8 79 1568-1654 83-173 (191)
272 PF05977 MFS_3: Transmembrane 48.8 2.9E+02 0.0063 36.2 15.1 44 1585-1628 271-321 (524)
273 PF08237 PE-PPE: PE-PPE domain 48.7 83 0.0018 36.8 9.3 84 245-328 2-91 (225)
274 PF02028 BCCT: BCCT family tra 48.1 1.3E+02 0.0027 39.2 11.6 35 1600-1634 118-152 (485)
275 PF06027 DUF914: Eukaryotic pr 48.0 3.3E+02 0.0071 33.9 14.6 38 1575-1613 183-220 (334)
276 KOG1202 Animal-type fatty acid 46.2 74 0.0016 44.5 9.1 94 215-323 2122-2216(2376)
277 COG4858 Uncharacterized membra 46.0 67 0.0014 36.6 7.5 42 1410-1451 140-183 (226)
278 KOG1282 Serine carboxypeptidas 45.9 1.4E+02 0.003 38.5 11.3 128 189-326 47-212 (454)
279 COG1377 FlhB Flagellar biosynt 45.3 2.5E+02 0.0054 35.3 12.9 74 1370-1451 22-101 (363)
280 PF09726 Macoilin: Transmembra 45.2 58 0.0013 43.9 8.2 94 1396-1533 29-133 (697)
281 PF06638 Strabismus: Strabismu 44.9 1.8E+02 0.0039 37.8 11.8 27 1433-1459 96-122 (505)
282 PLN02400 cellulose synthase 44.9 2.9E+02 0.0063 39.1 14.5 13 1307-1319 812-824 (1085)
283 PRK10369 heme lyase subunit Nr 43.9 9.5E+02 0.021 32.2 20.0 8 1383-1390 3-10 (571)
284 PF09994 DUF2235: Uncharacteri 43.8 1E+02 0.0023 36.8 9.4 93 217-309 2-112 (277)
285 COG1269 NtpI Archaeal/vacuolar 41.5 2.9E+02 0.0062 37.4 13.8 41 1372-1413 355-404 (660)
286 COG3673 Uncharacterized conser 41.1 99 0.0021 38.0 8.4 94 216-309 31-142 (423)
287 TIGR00958 3a01208 Conjugate Tr 40.6 2.6E+02 0.0056 37.9 13.3 15 1400-1414 49-63 (711)
288 PF03154 Atrophin-1: Atrophin- 40.5 86 0.0019 43.1 8.6 18 1401-1418 799-816 (982)
289 PF07787 DUF1625: Protein of u 40.5 89 0.0019 36.8 8.0 89 1398-1489 156-246 (248)
290 PLN02915 cellulose synthase A 40.0 1.3E+03 0.027 33.2 19.2 17 1403-1419 800-816 (1044)
291 PRK11465 putative mechanosensi 39.8 6.1E+02 0.013 34.9 16.2 74 1373-1451 127-203 (741)
292 TIGR00844 c_cpa1 na(+)/h(+) an 39.3 1.3E+03 0.028 32.3 20.0 19 1613-1631 262-280 (810)
293 PF05576 Peptidase_S37: PS-10 39.0 22 0.00049 44.6 2.9 106 215-328 62-171 (448)
294 PF12670 DUF3792: Protein of u 38.9 4.5E+02 0.0098 27.6 12.0 26 1511-1536 65-90 (116)
295 PLN02915 cellulose synthase A 38.8 3.6E+02 0.0079 38.1 14.0 22 1392-1413 806-827 (1044)
296 PRK10429 melibiose:sodium symp 38.6 9.3E+02 0.02 30.5 20.4 8 1699-1706 431-438 (473)
297 PF09586 YfhO: Bacterial membr 38.0 9.4E+02 0.02 33.1 18.2 24 1429-1452 210-233 (843)
298 TIGR00842 bcct choline/carniti 37.9 87 0.0019 40.3 7.9 47 1600-1646 81-127 (453)
299 KOG3533 Inositol 1,4,5-trispho 37.2 1.3E+02 0.0028 42.5 9.3 22 468-490 857-878 (2706)
300 PF11872 DUF3392: Protein of u 37.2 1.1E+02 0.0023 32.2 6.9 34 1419-1452 41-74 (106)
301 PRK09950 putative transporter; 36.4 3.1E+02 0.0067 36.0 12.4 48 1599-1646 126-174 (506)
302 PRK09776 putative diguanylate 36.4 7.2E+02 0.016 34.9 17.0 10 1395-1404 19-28 (1092)
303 PRK15419 proline:sodium sympor 36.1 5.7E+02 0.012 33.2 14.9 34 1470-1506 8-41 (502)
304 PRK14995 methyl viologen resis 36.1 9.8E+02 0.021 30.5 16.9 14 1618-1631 355-368 (495)
305 COG2211 MelB Na+/melibiose sym 35.7 8.5E+02 0.018 31.8 16.0 183 1411-1648 221-428 (467)
306 COG4485 Predicted membrane pro 34.7 5E+02 0.011 35.3 13.6 34 1616-1650 407-440 (858)
307 PRK03557 zinc transporter ZitB 34.5 9.3E+02 0.02 29.4 16.8 49 1471-1527 54-102 (312)
308 TIGR02865 spore_II_E stage II 33.8 7.7E+02 0.017 34.1 16.1 51 1599-1650 200-250 (764)
309 COG1269 NtpI Archaeal/vacuolar 33.5 1.4E+03 0.03 31.1 18.9 13 1639-1651 571-583 (660)
310 TIGR00353 nrfE c-type cytochro 32.7 1.3E+03 0.028 31.0 17.3 15 1637-1651 424-438 (576)
311 PF06570 DUF1129: Protein of u 32.4 6.9E+02 0.015 28.7 13.2 18 1508-1525 145-162 (206)
312 COG1087 GalE UDP-glucose 4-epi 31.9 1.9E+02 0.004 35.7 8.7 86 235-324 14-118 (329)
313 COG1480 Predicted membrane-ass 31.5 7.1E+02 0.015 33.8 14.4 27 1134-1161 105-131 (700)
314 PLN02248 cellulose synthase-li 31.5 1E+03 0.023 34.1 16.5 15 408-425 366-380 (1135)
315 PRK08633 2-acyl-glycerophospho 31.3 9.1E+02 0.02 34.0 16.8 185 1424-1632 135-340 (1146)
316 PRK09442 panF sodium/panthothe 30.6 1.2E+03 0.025 30.1 16.3 37 1470-1506 6-42 (483)
317 PLN02248 cellulose synthase-li 30.5 4.9E+02 0.011 37.1 13.2 35 1579-1613 964-998 (1135)
318 PRK02975 putative common antig 30.5 8.4E+02 0.018 30.8 13.7 43 1592-1634 176-227 (450)
319 PF13347 MFS_2: MFS/sugar tran 30.3 8.4E+02 0.018 30.3 14.7 17 1299-1315 74-90 (428)
320 PRK13592 ubiA prenyltransferas 30.0 6.3E+02 0.014 31.2 12.8 41 1570-1611 182-229 (299)
321 PRK11715 inner membrane protei 29.9 9.7E+02 0.021 31.1 15.0 21 1509-1529 331-351 (436)
322 PRK02983 lysS lysyl-tRNA synth 29.6 2.7E+02 0.0059 39.8 11.1 218 1427-1702 11-228 (1094)
323 PF07857 DUF1632: CEO family ( 29.5 1.4E+02 0.0031 35.6 7.3 89 1592-1702 49-137 (254)
324 PLN02436 cellulose synthase A 29.4 6.6E+02 0.014 35.8 14.1 41 1572-1613 917-957 (1094)
325 PRK11462 putative transporter; 29.4 1.3E+03 0.028 29.4 18.3 11 1696-1706 423-433 (460)
326 PLN00411 nodulin MtN21 family 28.5 4.5E+02 0.0097 32.9 11.7 30 1408-1451 2-31 (358)
327 PF06123 CreD: Inner membrane 28.4 1.2E+03 0.026 30.2 15.4 20 1509-1528 325-344 (430)
328 KOG1419 Voltage-gated K+ chann 28.4 1.3E+02 0.0028 39.3 7.0 57 1592-1653 213-279 (654)
329 TIGR02908 CoxD_Bacillus cytoch 28.3 7.5E+02 0.016 26.4 12.2 33 1419-1451 16-48 (110)
330 COG3336 Predicted membrane pro 28.2 2.3E+02 0.0049 34.6 8.5 60 1575-1634 99-179 (299)
331 TIGR01257 rim_protein retinal- 27.9 5.3E+02 0.012 39.7 13.8 26 1581-1608 744-769 (2272)
332 TIGR00400 mgtE Mg2+ transporte 27.9 1.4E+03 0.03 29.4 16.9 78 1508-1611 354-431 (449)
333 PLN03159 cation/H(+) antiporte 27.9 1.7E+03 0.036 31.2 17.9 9 1497-1505 189-197 (832)
334 PRK00293 dipZ thiol:disulfide 27.8 7.8E+02 0.017 32.8 14.3 23 1431-1453 169-191 (571)
335 PLN02638 cellulose synthase A 27.7 5.6E+02 0.012 36.5 13.1 17 1403-1419 836-852 (1079)
336 PLN02189 cellulose synthase 27.6 6.4E+02 0.014 35.8 13.5 43 1570-1613 861-903 (1040)
337 PF03205 MobB: Molybdopterin g 27.2 1E+02 0.0022 33.2 5.2 45 219-263 2-46 (140)
338 COG3859 Predicted membrane pro 26.6 2.1E+02 0.0045 32.4 7.3 16 1598-1613 53-68 (185)
339 COG4947 Uncharacterized protei 26.2 1.4E+02 0.0031 33.9 6.0 50 277-329 89-139 (227)
340 PRK03356 L-carnitine/gamma-but 26.1 4.8E+02 0.01 34.3 11.7 40 1599-1638 128-167 (504)
341 COG3127 Predicted ABC-type tra 25.6 1.1E+03 0.024 32.5 14.6 19 1486-1504 279-297 (829)
342 PRK09928 choline transport pro 25.5 3.6E+02 0.0078 36.6 10.6 15 1581-1595 174-188 (679)
343 PLN02893 Cellulose synthase-li 25.1 8.2E+02 0.018 33.7 13.7 16 1402-1418 504-519 (734)
344 COG4200 Uncharacterized protei 25.1 1.2E+03 0.027 27.8 16.6 27 1587-1613 155-182 (239)
345 TIGR00930 2a30 K-Cl cotranspor 24.8 2.2E+03 0.048 30.7 19.4 23 1510-1532 310-332 (953)
346 COG4452 CreD Inner membrane pr 24.8 1.3E+03 0.027 29.6 14.0 26 1147-1172 25-50 (443)
347 PF06626 DUF1152: Protein of u 24.7 1E+02 0.0022 37.7 5.0 42 1358-1417 159-200 (297)
348 COG1615 Uncharacterized conser 24.3 3.1E+02 0.0067 37.2 9.3 200 1432-1634 8-253 (885)
349 PLN02189 cellulose synthase 24.3 8.6E+02 0.019 34.7 13.8 27 1388-1414 800-826 (1040)
350 TIGR01185 devC DevC protein. T 24.1 2.1E+02 0.0046 35.7 7.9 27 1495-1522 292-318 (380)
351 PLN02638 cellulose synthase A 24.1 9.1E+02 0.02 34.6 14.0 44 1569-1613 898-941 (1079)
352 COG2898 Uncharacterized conser 24.0 1.3E+03 0.028 30.8 14.8 26 1659-1684 246-271 (538)
353 TIGR01116 ATPase-IIA1_Ca sarco 23.6 6.4E+02 0.014 35.5 13.0 15 1364-1378 630-644 (917)
354 PF06899 WzyE: WzyE protein; 23.5 9.5E+02 0.021 30.9 12.8 38 1597-1634 180-226 (448)
355 COG3125 CyoD Heme/copper-type 23.2 8.6E+02 0.019 26.0 10.6 24 1428-1451 17-40 (111)
356 PRK02509 hypothetical protein; 23.0 2.4E+03 0.052 30.4 17.6 32 1509-1540 238-270 (973)
357 PRK11281 hypothetical protein; 22.9 5.6E+02 0.012 36.9 12.2 48 1371-1418 770-817 (1113)
358 TIGR00831 a_cpa1 Na+/H+ antipo 22.6 63 0.0014 42.1 3.1 22 1396-1417 342-363 (525)
359 PF03839 Sec62: Translocation 22.3 2.4E+02 0.0052 33.2 7.3 26 1426-1452 107-132 (224)
360 KOG1283 Serine carboxypeptidas 22.2 2.4E+02 0.0052 35.0 7.3 96 214-309 29-142 (414)
361 KOG3817 Uncharacterized conser 22.1 7.4E+02 0.016 31.2 11.2 16 1600-1615 280-295 (452)
362 PRK09824 PTS system beta-gluco 22.0 1.7E+03 0.037 30.3 15.7 28 1578-1605 231-258 (627)
363 PF06570 DUF1129: Protein of u 21.9 6.3E+02 0.014 29.0 10.5 14 1616-1629 179-192 (206)
364 PF12805 FUSC-like: FUSC-like 21.7 2E+02 0.0043 34.5 6.7 36 1612-1649 21-56 (284)
365 PF07185 DUF1404: Protein of u 21.7 2.4E+02 0.0052 31.9 6.8 66 1584-1652 36-114 (169)
366 PF14184 YrvL: Regulatory prot 21.6 5.5E+02 0.012 28.0 9.3 37 1569-1605 46-82 (132)
367 PF09586 YfhO: Bacterial membr 21.6 1.4E+03 0.031 31.4 15.6 11 1441-1451 149-159 (843)
368 KOG2029 Uncharacterized conser 21.5 70 0.0015 42.0 3.0 53 276-328 511-574 (697)
369 PLN00151 potassium transporter 21.3 1.5E+03 0.033 31.7 14.9 36 1575-1613 536-571 (852)
370 TIGR02711 symport_actP cation/ 21.2 2E+03 0.043 28.8 16.2 33 1471-1506 36-68 (549)
371 TIGR03480 HpnN hopanoid biosyn 21.2 1.6E+03 0.035 31.3 16.0 13 1620-1632 399-411 (862)
372 PF06609 TRI12: Fungal trichot 21.2 1.6E+03 0.035 30.3 15.2 15 1393-1407 194-208 (599)
373 PF12270 Cyt_c_ox_IV: Cytochro 21.2 1.1E+03 0.024 26.0 11.4 54 1473-1528 43-107 (137)
374 CHL00182 tatC Sec-independent 21.1 1.5E+03 0.032 27.2 18.6 63 1575-1643 181-245 (249)
375 PF11654 DUF2665: Protein of u 21.1 57 0.0012 29.5 1.5 26 78-103 5-31 (47)
376 PRK12933 secD preprotein trans 21.1 2.2E+03 0.047 29.2 16.2 13 1055-1067 129-141 (604)
377 KOG3599 Ca2+-modulated nonsele 20.8 9.8E+02 0.021 33.4 13.4 53 1598-1650 651-705 (798)
378 COG0529 CysC Adenylylsulfate k 20.8 1.8E+02 0.0039 33.4 5.6 40 214-253 20-59 (197)
379 PF11085 YqhR: Conserved membr 20.7 6.4E+02 0.014 28.8 9.7 99 1415-1531 6-116 (173)
380 PRK01024 Na(+)-translocating N 20.3 8.2E+02 0.018 32.0 11.7 188 1340-1591 301-503 (503)
381 cd04951 GT1_WbdM_like This fam 20.2 4.4E+02 0.0096 31.0 9.2 38 218-255 2-39 (360)
382 TIGR01912 TatC-Arch Twin argin 20.2 1.5E+03 0.032 26.9 18.0 70 1569-1643 163-233 (237)
No 1
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=100.00 E-value=5.2e-61 Score=564.00 Aligned_cols=363 Identities=33% Similarity=0.520 Sum_probs=328.6
Q ss_pred CCceEEEecchhhHHHHHhcCCcccccCCCchhhhhccccccccceeecccCceeeeeccccCCCCccccccCCcceEEE
Q 000293 110 IGNWVLFTSPTAFNRFVLLRCPSISFEGSDLLEDVNEKLVKEDTHFVRLNSGRIQARTGAVRDGGETESEMEGKLEYQRV 189 (1712)
Q Consensus 110 ~g~~~L~~~~t~f~~~Ll~~CPsLs~~y~p~~~~~~~~l~~~~~h~~tL~~GhlQTv~~s~~~~~~~~s~~~p~v~YrRe 189 (1712)
.+.+.++|.+++|.+|++.+||.|++.|.|++|| ++||+||++..+.. ..|.+.|+|+
T Consensus 39 ~~~~~l~~~~~~f~~~l~~~~~~l~~~y~p~~w~---------------~~ghlQT~~~~~~~-------~~p~~~y~Re 96 (409)
T KOG1838|consen 39 PRKPSLFCGDSGFARFLVPKCPLLEEKYLPTLWL---------------FSGHLQTLLLSFFG-------SKPPVEYTRE 96 (409)
T ss_pred CCCCeeecCchHHHHHHHhhccccccccccceee---------------cCCeeeeeehhhcC-------CCCCCcceeE
Confidence 4555999999999999999999999999876554 47889999988754 2789999999
Q ss_pred EEEcCCCcEEEEEecCCCccc--ccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCc
Q 000293 190 CVNTEDGGVISLDWPSNLDLH--EEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLF 267 (1712)
Q Consensus 190 ~Ltt~DGg~LaLDW~~~~~~~--~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly 267 (1712)
+++++|||++++||..+++.. ...++.|+||||||++|||++.|+++++..+++.||+|||+|+||||++++++|++|
T Consensus 97 ii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f 176 (409)
T KOG1838|consen 97 IIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLF 176 (409)
T ss_pred EEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCcee
Confidence 999999999999999764321 123567999999999999999999999999999999999999999999999999999
Q ss_pred ccCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhc---cCchhhHhHHH
Q 000293 268 TAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATR---SSPHHIALDEK 344 (1712)
Q Consensus 268 ~a~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~---sl~~~~ly~~~ 344 (1712)
++++++|++++++||+++||.+++++||+||||+++++|+|+.++++++.|++++|+|||.....+ ...++++|++.
T Consensus 177 ~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~ 256 (409)
T KOG1838|consen 177 TAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRA 256 (409)
T ss_pred ecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999753333 34678899999
Q ss_pred HHHHHHHHHHhhhhhhhccCCCCCHHHHhhhccHHHHHHHHhhhccchhcHHHHHhhcCcchhcCcCCccEEEEEe-CCC
Q 000293 345 LANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAG 423 (1712)
Q Consensus 345 La~~Lk~~L~~~~~lf~~~~~~~Die~IlkaktlrEFDd~~t~~~~Gf~sv~eYYr~aS~~~~L~kIkVPtLII~G-DDp 423 (1712)
++.++++++.+|+..+.. ...|.+.+.+++++|+||+.++++++||+++++||+++|+.+++++|+||+|||++ |||
T Consensus 257 l~~~l~~~~~~~r~~~~~--~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~ina~DDP 334 (409)
T KOG1838|consen 257 LTLNLKRIVLRHRHTLFE--DPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLCINAADDP 334 (409)
T ss_pred HHHhHHHHHhhhhhhhhh--ccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccEEEEecCCCC
Confidence 999999999999874432 35778889999999999999999999999999999999999999999999999999 999
Q ss_pred CCCCCChHHHHHhcCCCeEEEEecCCCccccCCCC--chhHHHHHHHHHHHHHHHhhhccCCCCCccccccccCC
Q 000293 424 AVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGGR--AAESWCQNLVIEWLSAVELGLLKGRHPLLKDVDVTINP 496 (1712)
Q Consensus 424 ~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~--~~~sWv~r~VlEFL~av~~~llkg~~p~~~d~~~~inp 496 (1712)
++|+.++|...+..||++.++++..|||++|.++. .+..|+.+.+.+|+..++..+..+++++..++....+|
T Consensus 335 v~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (409)
T KOG1838|consen 335 VVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAIFQDEVGRHRPSDLEHVRSDP 409 (409)
T ss_pred CCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHHhhhcccccCcccccccccCC
Confidence 99999999999999999999999999999999875 66789999899999999999999999999988877654
No 2
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=100.00 E-value=3.7e-46 Score=426.03 Aligned_cols=313 Identities=26% Similarity=0.420 Sum_probs=276.6
Q ss_pred eecccCceeeeeccccCCCCccccccCCcceEEEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHH
Q 000293 156 VRLNSGRIQARTGAVRDGGETESEMEGKLEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIR 235 (1712)
Q Consensus 156 ~tL~~GhlQTv~~s~~~~~~~~s~~~p~v~YrRe~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir 235 (1712)
..|+|||+||++.+++. ..+.+.+.|+|+.+.++||+.+.+||..++ .....|.||++||+.|++.+.|++
T Consensus 24 ~~L~ng~lqTl~~~~~~-----frr~~~~~~~re~v~~pdg~~~~ldw~~~p----~~~~~P~vVl~HGL~G~s~s~y~r 94 (345)
T COG0429 24 WGLFNGHLQTLYPSLRL-----FRRKPKVAYTRERLETPDGGFIDLDWSEDP----RAAKKPLVVLFHGLEGSSNSPYAR 94 (345)
T ss_pred ccccCcchhhhhhhHHH-----hhcccccccceEEEEcCCCCEEEEeeccCc----cccCCceEEEEeccCCCCcCHHHH
Confidence 44789999999985422 112688999999999999999999999853 234468999999999999999999
Q ss_pred HHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCC
Q 000293 236 LFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTP 315 (1712)
Q Consensus 236 ~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~ 315 (1712)
.+++.+.++||.+|++|+|||++++.++|++|+.++++|++.++++++.++|..++++||+||||+++++|+++++++.+
T Consensus 95 ~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~ 174 (345)
T COG0429 95 GLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLP 174 (345)
T ss_pred HHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEecCCCChhhhhccC--chh-hHhHHHHHHHHHHHHHhhhhhhhccCCCCC-HHHHhhhccHHHHHHHHhhhccc
Q 000293 316 LTAVTCIDNPFDLEEATRSS--PHH-IALDEKLANGLIDILRSNKELFKGRAKGFD-VEKALSAKSVRDFEKAISMVSYG 391 (1712)
Q Consensus 316 V~AaVlIS~P~Dl~e~~~sl--~~~-~ly~~~La~~Lk~~L~~~~~lf~~~~~~~D-ie~IlkaktlrEFDd~~t~~~~G 391 (1712)
+.+++++|+|||+..+...+ .+. ++|.+++.+.|++.+.++...+.+. .+.+ ...+.+++++++||+.+|++.+|
T Consensus 175 ~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~-~p~~~~~~ik~~~ti~eFD~~~Tap~~G 253 (345)
T COG0429 175 LDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPS-LPGTVLAAIKRCRTIREFDDLLTAPLHG 253 (345)
T ss_pred cceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcc-cCcHHHHHHHhhchHHhccceeeecccC
Confidence 99999999999998776543 344 8899999999999988887766332 2233 67788899999999999999999
Q ss_pred hhcHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCccccCCCCchh--HHHHHHH
Q 000293 392 FEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGGRAAE--SWCQNLV 468 (1712)
Q Consensus 392 f~sv~eYYr~aS~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~~~~--sWv~r~V 468 (1712)
|+++++||+.+|+...|++|.+|+|+||+ |||+++++.+|......+|++.+.+++.|||.+|..+.... .|..+.+
T Consensus 254 f~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri 333 (345)
T COG0429 254 FADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRI 333 (345)
T ss_pred CCcHHHHHHhccccccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHH
Confidence 99999999999999999999999999999 99999999999876568999999999999999999854323 3999999
Q ss_pred HHHHHHHHhh
Q 000293 469 IEWLSAVELG 478 (1712)
Q Consensus 469 lEFL~av~~~ 478 (1712)
.+||+.+.+.
T Consensus 334 ~~~l~~~~~~ 343 (345)
T COG0429 334 LDWLDPFLEA 343 (345)
T ss_pred HHHHHHHHhh
Confidence 9999987643
No 3
>PLN02511 hydrolase
Probab=100.00 E-value=2.8e-43 Score=422.17 Aligned_cols=335 Identities=30% Similarity=0.517 Sum_probs=277.8
Q ss_pred hhHHHHHhcCCcccccCCCchhhhhccccccccceeecccCceeeeeccccCCCCccccccCCcceEEEEEEcCCCcEEE
Q 000293 121 AFNRFVLLRCPSISFEGSDLLEDVNEKLVKEDTHFVRLNSGRIQARTGAVRDGGETESEMEGKLEYQRVCVNTEDGGVIS 200 (1712)
Q Consensus 121 ~f~~~Ll~~CPsLs~~y~p~~~~~~~~l~~~~~h~~tL~~GhlQTv~~s~~~~~~~~s~~~p~v~YrRe~Ltt~DGg~La 200 (1712)
.+++||+++||+|..+|.|++| |.|||+||++..+..+ .+.+.|+|+.+.++||+.+.
T Consensus 28 ~~~~~~~~~~~~l~~~y~p~~w---------------l~n~h~qT~~~~~~~~-------~~~~~~~re~l~~~DG~~~~ 85 (388)
T PLN02511 28 GGRDSFLPKFKSLERPYDAFPL---------------LGNRHVETIFASFFRS-------LPAVRYRRECLRTPDGGAVA 85 (388)
T ss_pred chHHHHHHhhhhhcCCccCCcc---------------CCCccHHHhhHHHhcC-------CCCCceeEEEEECCCCCEEE
Confidence 3599999999999999987644 3589999999887432 67899999999999999999
Q ss_pred EEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHH
Q 000293 201 LDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQ 280 (1712)
Q Consensus 201 LDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd 280 (1712)
+||...... ....++|+||++||++|++...|++.++..+.++||+|+++|+||||+|+.+.++.|+.+.++|+.++++
T Consensus 86 ldw~~~~~~-~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~ 164 (388)
T PLN02511 86 LDWVSGDDR-ALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVD 164 (388)
T ss_pred EEecCcccc-cCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHH
Confidence 999863210 1123568999999998877777888889889999999999999999999888888888899999999999
Q ss_pred HHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccC--chhhHhHHHHHHHHHHHHHhhhh
Q 000293 281 FIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSS--PHHIALDEKLANGLIDILRSNKE 358 (1712)
Q Consensus 281 ~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl--~~~~ly~~~La~~Lk~~L~~~~~ 358 (1712)
+++.++|..+++++||||||+++++|++++++..+|.+++++++|+++..+...+ ....+|...+...+++.+..+..
T Consensus 165 ~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~ 244 (388)
T PLN02511 165 HVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNNVYDKALAKALRKIFAKHAL 244 (388)
T ss_pred HHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999889999999999999999999998766799999999999874433221 22356777777777666655554
Q ss_pred hhhccCCCCCHHHHhhhccHHHHHHHHhhhccchhcHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhc
Q 000293 359 LFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAE 437 (1712)
Q Consensus 359 lf~~~~~~~Die~IlkaktlrEFDd~~t~~~~Gf~sv~eYYr~aS~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~ 437 (1712)
.+......++...+...+++++||+.++.+.+||.+.++||+..++...+++|++|+|+|+| +|+++|+...+...+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~ 324 (388)
T PLN02511 245 LFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKA 324 (388)
T ss_pred HHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhc
Confidence 44432223566667778899999999999999999999999999999999999999999999 99999987666555678
Q ss_pred CCCeEEEEecCCCccccCCCCc---hhHHHHHHHHHHHHHHHhh
Q 000293 438 NPFTSLLLCSCLPSSVIGGGRA---AESWCQNLVIEWLSAVELG 478 (1712)
Q Consensus 438 nPnv~LvLt~gGHH~gF~e~~~---~~sWv~r~VlEFL~av~~~ 478 (1712)
+|++.++++++|||+.|.+... ...|+++.+.+||+++...
T Consensus 325 ~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~~ 368 (388)
T PLN02511 325 NPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEEG 368 (388)
T ss_pred CCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHHh
Confidence 9999999999999999987642 3469999999999988755
No 4
>PRK10985 putative hydrolase; Provisional
Probab=100.00 E-value=1.4e-37 Score=363.71 Aligned_cols=307 Identities=21% Similarity=0.330 Sum_probs=250.5
Q ss_pred cccCceeeeeccccCCCCccccccCCcceEEEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHH
Q 000293 158 LNSGRIQARTGAVRDGGETESEMEGKLEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLF 237 (1712)
Q Consensus 158 L~~GhlQTv~~s~~~~~~~~s~~~p~v~YrRe~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~L 237 (1712)
+.|||+||++.....+ .+.+.++|+.++++||+.+.++|...+. ....+|+||++||+++++...|++.+
T Consensus 10 ~~~~h~qt~~~~~~~~-------~~~~~~~~~~~~~~dg~~~~l~w~~~~~---~~~~~p~vll~HG~~g~~~~~~~~~~ 79 (324)
T PRK10985 10 ASNPHLQTLLPRLIRR-------KVLFTPYWQRLELPDGDFVDLAWSEDPA---QARHKPRLVLFHGLEGSFNSPYAHGL 79 (324)
T ss_pred CCCCcHHHhhHHHhcC-------CCCCCcceeEEECCCCCEEEEecCCCCc---cCCCCCEEEEeCCCCCCCcCHHHHHH
Confidence 3589999999876432 5778999999999999999999975421 22346899999999776666688889
Q ss_pred HHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCcc
Q 000293 238 VCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLT 317 (1712)
Q Consensus 238 a~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~ 317 (1712)
+..|.++||+|+++|+||||+++...++.|+.+.++|+.+++++++++++..+++++||||||++++.|+++++++..+.
T Consensus 80 ~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~ 159 (324)
T PRK10985 80 LEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLD 159 (324)
T ss_pred HHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCcc
Confidence 99999999999999999999988766777888889999999999999888889999999999999999999987655689
Q ss_pred EEEEecCCCChhhhhccC--chhhHhHHHHHHHHHHHHHhhhhhhhccCCCCCHHHHhhhccHHHHHHHHhhhccchhcH
Q 000293 318 AVTCIDNPFDLEEATRSS--PHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAI 395 (1712)
Q Consensus 318 AaVlIS~P~Dl~e~~~sl--~~~~ly~~~La~~Lk~~L~~~~~lf~~~~~~~Die~IlkaktlrEFDd~~t~~~~Gf~sv 395 (1712)
+++++++|+++..+...+ ....+|.+.+...+++.+.+....+++. ...+.+.+...+++++||+.++.+.+||.+.
T Consensus 160 ~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~ 238 (324)
T PRK10985 160 AAVIVSAPLMLEACSYRMEQGFSRVYQRYLLNLLKANAARKLAAYPGT-LPINLAQLKSVRRLREFDDLITARIHGFADA 238 (324)
T ss_pred EEEEEcCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccc-ccCCHHHHhcCCcHHHHhhhheeccCCCCCH
Confidence 999999999987654321 2234566666666665544443334332 2456677888899999999999999999999
Q ss_pred HHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCccccCCCC--chhHHHHHHHHHHH
Q 000293 396 EDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGGR--AAESWCQNLVIEWL 472 (1712)
Q Consensus 396 ~eYYr~aS~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~--~~~sWv~r~VlEFL 472 (1712)
.+||...+....+++|++|+|+|+| +|+++|+...+.. .+.+|++.++++++|||+.|.++. .+..|+++.+.+||
T Consensus 239 ~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~-~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~ 317 (324)
T PRK10985 239 IDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKP-ESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWL 317 (324)
T ss_pred HHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChHH-HHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHH
Confidence 9999999988999999999999999 8999987665543 456789999999998898888763 45689999999999
Q ss_pred HHHH
Q 000293 473 SAVE 476 (1712)
Q Consensus 473 ~av~ 476 (1712)
+.+.
T Consensus 318 ~~~~ 321 (324)
T PRK10985 318 TTYL 321 (324)
T ss_pred HHhh
Confidence 8654
No 5
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.85 E-value=7.5e-20 Score=216.27 Aligned_cols=277 Identities=11% Similarity=0.092 Sum_probs=160.7
Q ss_pred CcceEEEEEEcCCCcEEEEE-ecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC
Q 000293 183 KLEYQRVCVNTEDGGVISLD-WPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPL 261 (1712)
Q Consensus 183 ~v~YrRe~Ltt~DGg~LaLD-W~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~l 261 (1712)
.+.++..++...||..+.+. |... ....+++|||+||+++ +...|++.++..+.++||+|+++|+||||.|..
T Consensus 58 ~~~~~~~~~~~~~g~~l~~~~~~p~-----~~~~~~~iv~lHG~~~-~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~ 131 (349)
T PLN02385 58 GIKTEESYEVNSRGVEIFSKSWLPE-----NSRPKAAVCFCHGYGD-TCTFFFEGIARKIASSGYGVFAMDYPGFGLSEG 131 (349)
T ss_pred CcceeeeeEEcCCCCEEEEEEEecC-----CCCCCeEEEEECCCCC-ccchHHHHHHHHHHhCCCEEEEecCCCCCCCCC
Confidence 34555556667788777653 6532 1134689999999843 444567788888989999999999999999975
Q ss_pred CCCCCcc-cCcHHHHHHHHHHHHhh--CCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchh
Q 000293 262 TTSRLFT-AADSDDICTAIQFIGKA--RPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHH 338 (1712)
Q Consensus 262 tsprly~-a~~tdDL~aVLd~I~kr--yP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~ 338 (1712)
.....+. ....+|+.++++++..+ ++..+++++||||||++++.++.++++ .+.++|++++........... .
T Consensus 132 ~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~--~v~glVLi~p~~~~~~~~~~~--~ 207 (349)
T PLN02385 132 LHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPN--AWDGAILVAPMCKIADDVVPP--P 207 (349)
T ss_pred CCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcc--hhhheeEecccccccccccCc--h
Confidence 3222222 23467888888887653 345689999999999999999988765 689999998765432211110 0
Q ss_pred hHhHHHHHHHHHHHHHhhhhhhhccCCCCCHHHHhhhc---cHHHHHHHHhhhccchhcHHHHHhhc-CcchhcCcCCcc
Q 000293 339 IALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAK---SVRDFEKAISMVSYGFEAIEDFYSKS-STRSVVGNIKIP 414 (1712)
Q Consensus 339 ~ly~~~La~~Lk~~L~~~~~lf~~~~~~~Die~Ilkak---tlrEFDd~~t~~~~Gf~sv~eYYr~a-S~~~~L~kIkVP 414 (1712)
.... +...+...+.. ...++.. .+ .+...... ...+++.........+....++++.. .....+.+|++|
T Consensus 208 -~~~~-~~~~~~~~~p~-~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P 281 (349)
T PLN02385 208 -LVLQ-ILILLANLLPK-AKLVPQK--DL-AELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLP 281 (349)
T ss_pred -HHHH-HHHHHHHHCCC-ceecCCC--cc-ccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCC
Confidence 0000 11111111000 0001000 00 00000000 00000000000000111222233221 223557889999
Q ss_pred EEEEEe-CCCCCCCCChHHHHHhc--CCCeEEEEecCCCccccCCCCch-hHHHHHHHHHHHHHHH
Q 000293 415 VLFIQN-DAGAVPPFSIPRSSIAE--NPFTSLLLCSCLPSSVIGGGRAA-ESWCQNLVIEWLSAVE 476 (1712)
Q Consensus 415 tLII~G-DDp~VP~~aip~~la~~--nPnv~LvLt~gGHH~gF~e~~~~-~sWv~r~VlEFL~av~ 476 (1712)
+|+|+| +|.++|+..... +.+. +++.++.++++++|+.+.+.... ..-+.+.+.+||++..
T Consensus 282 ~Lii~G~~D~vv~~~~~~~-l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 282 LLILHGEADKVTDPSVSKF-LYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred EEEEEeCCCCccChHHHHH-HHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 999999 899998764432 2333 46789999999999887653321 1225678899998653
No 6
>PHA02857 monoglyceride lipase; Provisional
Probab=99.84 E-value=7.9e-20 Score=207.23 Aligned_cols=262 Identities=13% Similarity=0.108 Sum_probs=157.0
Q ss_pred EEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcc-
Q 000293 190 CVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFT- 268 (1712)
Q Consensus 190 ~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~- 268 (1712)
++...||..+.+.++.+. ...+++|+++||++ +...++..++..+.++||+|+++|+||||.|.........
T Consensus 4 ~~~~~~g~~l~~~~~~~~-----~~~~~~v~llHG~~--~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~ 76 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPI-----TYPKALVFISHGAG--EHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDF 76 (276)
T ss_pred eeecCCCCEEEEEeccCC-----CCCCEEEEEeCCCc--cccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCH
Confidence 456679999998644431 23457888889984 3344567789999999999999999999999643211111
Q ss_pred cCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhHhHHHHHHH
Q 000293 269 AADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANG 348 (1712)
Q Consensus 269 a~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~~La~~ 348 (1712)
..+.+|+...+++++++++..+++++||||||++++.++..+++ .++++|+++++.+.. ..+.... +...
T Consensus 77 ~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~--~i~~lil~~p~~~~~----~~~~~~~----~~~~ 146 (276)
T PHA02857 77 GVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPN--LFTAMILMSPLVNAE----AVPRLNL----LAAK 146 (276)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCcc--ccceEEEeccccccc----cccHHHH----HHHH
Confidence 12457888888888877887899999999999999999988765 589999998865421 1111101 1111
Q ss_pred HHHHHHhhhhhhhccCCCCCHHHHhhhccHHHHHHHHhhhcc-----chhcHHHHHhh-cCcchhcCcCCccEEEEEe-C
Q 000293 349 LIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSY-----GFEAIEDFYSK-SSTRSVVGNIKIPVLFIQN-D 421 (1712)
Q Consensus 349 Lk~~L~~~~~lf~~~~~~~Die~IlkaktlrEFDd~~t~~~~-----Gf~sv~eYYr~-aS~~~~L~kIkVPtLII~G-D 421 (1712)
+........ .. ..+....+ .+...+.......+.. ...-....+.. ......+.+|++|+|+|+| +
T Consensus 147 ~~~~~~~~~-~~----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~ 219 (276)
T PHA02857 147 LMGIFYPNK-IV----GKLCPESV--SRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTN 219 (276)
T ss_pred HHHHhCCCC-cc----CCCCHhhc--cCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCC
Confidence 111000000 00 00111100 0011111111111100 00000111111 1123568899999999999 8
Q ss_pred CCCCCCCChHHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHH
Q 000293 422 AGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAV 475 (1712)
Q Consensus 422 Dp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av 475 (1712)
|.++|+...........+++++.++++++|....+..+...-+.+.+.+||+..
T Consensus 220 D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 220 NEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred CCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 999998754433222235789999999999888764433344668889999864
No 7
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.84 E-value=1e-19 Score=212.81 Aligned_cols=277 Identities=10% Similarity=0.116 Sum_probs=161.3
Q ss_pred CcceEEEEEEcCCCcEEEEE-ecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC
Q 000293 183 KLEYQRVCVNTEDGGVISLD-WPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPL 261 (1712)
Q Consensus 183 ~v~YrRe~Ltt~DGg~LaLD-W~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~l 261 (1712)
.+.++...+...||..+.+. |..+. ....+++|||+||+++ +...++..++..|.++||+|+++|+||||.|..
T Consensus 29 ~~~~~~~~~~~~dg~~l~~~~~~~~~----~~~~~~~VvllHG~~~-~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~ 103 (330)
T PLN02298 29 GIKGSKSFFTSPRGLSLFTRSWLPSS----SSPPRALIFMVHGYGN-DISWTFQSTAIFLAQMGFACFALDLEGHGRSEG 103 (330)
T ss_pred CCccccceEEcCCCCEEEEEEEecCC----CCCCceEEEEEcCCCC-CcceehhHHHHHHHhCCCEEEEecCCCCCCCCC
Confidence 36677888999999999985 54321 1134678999999853 333345667778889999999999999999863
Q ss_pred CCCCCcc-cCcHHHHHHHHHHHHhh--CCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchh
Q 000293 262 TTSRLFT-AADSDDICTAIQFIGKA--RPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHH 338 (1712)
Q Consensus 262 tsprly~-a~~tdDL~aVLd~I~kr--yP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~ 338 (1712)
....... ....+|+.++++++..+ ++..+++++||||||++++.++.++++ .+.++|++++.......... .
T Consensus 104 ~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~-~-- 178 (330)
T PLN02298 104 LRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPE--GFDGAVLVAPMCKISDKIRP-P-- 178 (330)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcc--cceeEEEecccccCCcccCC-c--
Confidence 2221111 23468999999999764 345689999999999999999888765 69999999876554321110 0
Q ss_pred hHhHHHHHHHHHHHHHhhhhhhhccCCCCCHH-HHhhhccHHHHHHH-Hh-hhccchhcHHHHHhhcC-cchhcCcCCcc
Q 000293 339 IALDEKLANGLIDILRSNKELFKGRAKGFDVE-KALSAKSVRDFEKA-IS-MVSYGFEAIEDFYSKSS-TRSVVGNIKIP 414 (1712)
Q Consensus 339 ~ly~~~La~~Lk~~L~~~~~lf~~~~~~~Die-~IlkaktlrEFDd~-~t-~~~~Gf~sv~eYYr~aS-~~~~L~kIkVP 414 (1712)
+.... +...+.++... ...... ...++.. .......+...+.. +. .+..+ ...+.++... ....+.+|++|
T Consensus 179 ~~~~~-~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~i~~P 253 (330)
T PLN02298 179 WPIPQ-ILTFVARFLPT-LAIVPT-ADLLEKSVKVPAKKIIAKRNPMRYNGKPRLG--TVVELLRVTDYLGKKLKDVSIP 253 (330)
T ss_pred hHHHH-HHHHHHHHCCC-CccccC-CCcccccccCHHHHHHHHhCccccCCCccHH--HHHHHHHHHHHHHHhhhhcCCC
Confidence 00000 00001111100 000000 0000000 00000000000000 00 00000 0111111111 23457889999
Q ss_pred EEEEEe-CCCCCCCCChHHHHHhc--CCCeEEEEecCCCccccCCCCc-hhHHHHHHHHHHHHHH
Q 000293 415 VLFIQN-DAGAVPPFSIPRSSIAE--NPFTSLLLCSCLPSSVIGGGRA-AESWCQNLVIEWLSAV 475 (1712)
Q Consensus 415 tLII~G-DDp~VP~~aip~~la~~--nPnv~LvLt~gGHH~gF~e~~~-~~sWv~r~VlEFL~av 475 (1712)
+|+||| +|+++|+..... +++. .++.+++++++++|..+.+... ....+.+.+.+||.+.
T Consensus 254 vLii~G~~D~ivp~~~~~~-l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~ 317 (330)
T PLN02298 254 FIVLHGSADVVTDPDVSRA-LYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNER 317 (330)
T ss_pred EEEEecCCCCCCCHHHHHH-HHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHh
Confidence 999999 999999865432 2333 4678999999999987654322 2235667888998875
No 8
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.80 E-value=4.5e-18 Score=198.72 Aligned_cols=272 Identities=17% Similarity=0.167 Sum_probs=169.3
Q ss_pred eEEEEEEcCCCcEEEEE-ecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCC-CCC
Q 000293 186 YQRVCVNTEDGGVISLD-WPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSP-LTT 263 (1712)
Q Consensus 186 YrRe~Ltt~DGg~LaLD-W~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~-lts 263 (1712)
.....+...||..+.+. |.... ....+||++||+.+ ....| ..++..|..+||.|+++|+||||.|. ...
T Consensus 9 ~~~~~~~~~d~~~~~~~~~~~~~------~~~g~Vvl~HG~~E-h~~ry-~~la~~l~~~G~~V~~~D~RGhG~S~r~~r 80 (298)
T COG2267 9 RTEGYFTGADGTRLRYRTWAAPE------PPKGVVVLVHGLGE-HSGRY-EELADDLAARGFDVYALDLRGHGRSPRGQR 80 (298)
T ss_pred cccceeecCCCceEEEEeecCCC------CCCcEEEEecCchH-HHHHH-HHHHHHHHhCCCEEEEecCCCCCCCCCCCc
Confidence 35566788899999876 65431 12379999999854 33444 45899999999999999999999997 332
Q ss_pred CCCcc-cCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhHhH
Q 000293 264 SRLFT-AADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALD 342 (1712)
Q Consensus 264 prly~-a~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~ 342 (1712)
...-. ..+.+|+.++++.+...++..|++++||||||.|++.|+.+++ .++.++|+.+|.+.+.... ......
T Consensus 81 g~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~--~~i~~~vLssP~~~l~~~~----~~~~~~ 154 (298)
T COG2267 81 GHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYP--PRIDGLVLSSPALGLGGAI----LRLILA 154 (298)
T ss_pred CCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCC--ccccEEEEECccccCChhH----HHHHHH
Confidence 22222 2346899999999988888899999999999999999999987 4799999888887765300 000111
Q ss_pred HHHHHHHHHHHHhhhhhhhcc-CCCCCHHHHhhhccHHHHHHHHhhhc--cch---hcHHHHHhhcC--cchhcCcCCcc
Q 000293 343 EKLANGLIDILRSNKELFKGR-AKGFDVEKALSAKSVRDFEKAISMVS--YGF---EAIEDFYSKSS--TRSVVGNIKIP 414 (1712)
Q Consensus 343 ~~La~~Lk~~L~~~~~lf~~~-~~~~Die~IlkaktlrEFDd~~t~~~--~Gf---~sv~eYYr~aS--~~~~L~kIkVP 414 (1712)
......+.++... ..+... ......+.+ ++..+..+.....+. ++. ..+..+..... .......+++|
T Consensus 155 ~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~--sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~P 230 (298)
T COG2267 155 RLALKLLGRIRPK--LPVDSNLLEGVLTDDL--SRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALP 230 (298)
T ss_pred HHhcccccccccc--cccCcccccCcCcchh--hcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCC
Confidence 1111111111100 000000 000111111 222222222222221 111 12333333333 34457789999
Q ss_pred EEEEEe-CCCCCC-CCChH-HHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHH
Q 000293 415 VLFIQN-DAGAVP-PFSIP-RSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAV 475 (1712)
Q Consensus 415 tLII~G-DDp~VP-~~aip-~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av 475 (1712)
+|+++| +|.+++ ..... .......|++++.+++++.|-.+.+....+.-+.+.+.+||...
T Consensus 231 vLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~ 294 (298)
T COG2267 231 VLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEA 294 (298)
T ss_pred EEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhh
Confidence 999999 898888 44333 33345678899999999999888875443344567888888754
No 9
>PRK10749 lysophospholipase L2; Provisional
Probab=99.79 E-value=4.6e-18 Score=200.05 Aligned_cols=270 Identities=15% Similarity=0.137 Sum_probs=153.4
Q ss_pred EEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC---
Q 000293 189 VCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSR--- 265 (1712)
Q Consensus 189 e~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltspr--- 265 (1712)
..+...||..+.+....+. ..+++|||+||+++ +.. .++.++..++++||+|+++|+||||.|......
T Consensus 33 ~~~~~~~g~~l~~~~~~~~------~~~~~vll~HG~~~-~~~-~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~ 104 (330)
T PRK10749 33 AEFTGVDDIPIRFVRFRAP------HHDRVVVICPGRIE-SYV-KYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHR 104 (330)
T ss_pred eEEEcCCCCEEEEEEccCC------CCCcEEEEECCccc-hHH-HHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCc
Confidence 3456678887777533221 23578999999843 333 345578888999999999999999999643211
Q ss_pred --Ccc-cCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhHhH
Q 000293 266 --LFT-AADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALD 342 (1712)
Q Consensus 266 --ly~-a~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~ 342 (1712)
.+. ....+|+.++++++...++..+++++||||||.+++.|+..+++ .++++|++++.......... ....
T Consensus 105 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~--~v~~lvl~~p~~~~~~~~~~----~~~~ 178 (330)
T PRK10749 105 GHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPG--VFDAIALCAPMFGIVLPLPS----WMAR 178 (330)
T ss_pred CccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCC--CcceEEEECchhccCCCCCc----HHHH
Confidence 112 23467899999888776777899999999999999999998765 68899988776543211110 0100
Q ss_pred HHHHHHHHHH--HHhhhhhhhccCC--CCCHHHHhhhc-cHHHHHHHHh-hhc--c---chhcHHHHHhh-cCcchhcCc
Q 000293 343 EKLANGLIDI--LRSNKELFKGRAK--GFDVEKALSAK-SVRDFEKAIS-MVS--Y---GFEAIEDFYSK-SSTRSVVGN 410 (1712)
Q Consensus 343 ~~La~~Lk~~--L~~~~~lf~~~~~--~~Die~Ilkak-tlrEFDd~~t-~~~--~---Gf~sv~eYYr~-aS~~~~L~k 410 (1712)
. +...+... +............ .+..+.+.... ....+-+.+. .+. . .+....+.+.. ......+.+
T Consensus 179 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (330)
T PRK10749 179 R-ILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGD 257 (330)
T ss_pred H-HHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccC
Confidence 0 11100000 0000000000000 00000000000 0001111111 111 0 11112222211 112355788
Q ss_pred CCccEEEEEe-CCCCCCCCChHHHHHhc-------CCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHH
Q 000293 411 IKIPVLFIQN-DAGAVPPFSIPRSSIAE-------NPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSA 474 (1712)
Q Consensus 411 IkVPtLII~G-DDp~VP~~aip~~la~~-------nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~a 474 (1712)
+++|+|+|+| +|+++|+..... .++. .++++++++++++|..+.+......-+.+.+.+||+.
T Consensus 258 i~~P~Lii~G~~D~vv~~~~~~~-~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 258 ITTPLLLLQAEEERVVDNRMHDR-FCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNR 328 (330)
T ss_pred CCCCEEEEEeCCCeeeCHHHHHH-HHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhh
Confidence 9999999999 999998754322 2221 2567899999999988876432233456788899875
No 10
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.78 E-value=6.3e-18 Score=194.08 Aligned_cols=260 Identities=11% Similarity=0.092 Sum_probs=147.1
Q ss_pred EEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCc
Q 000293 188 RVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLF 267 (1712)
Q Consensus 188 Re~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly 267 (1712)
...++. ||..+.+... +.+++|||+||+++ +. ..|+.++..|.+++ +|+++|+||||.|+.......
T Consensus 9 ~~~~~~-~g~~i~y~~~---------G~g~~vvllHG~~~-~~-~~w~~~~~~L~~~~-~via~D~~G~G~S~~~~~~~~ 75 (295)
T PRK03592 9 MRRVEV-LGSRMAYIET---------GEGDPIVFLHGNPT-SS-YLWRNIIPHLAGLG-RCLAPDLIGMGASDKPDIDYT 75 (295)
T ss_pred ceEEEE-CCEEEEEEEe---------CCCCEEEEECCCCC-CH-HHHHHHHHHHhhCC-EEEEEcCCCCCCCCCCCCCCC
Confidence 344444 7777765432 13579999999843 33 34677888887775 999999999999975543222
Q ss_pred ccCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCc--hhhHhHHHH
Q 000293 268 TAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSP--HHIALDEKL 345 (1712)
Q Consensus 268 ~a~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~--~~~ly~~~L 345 (1712)
.....+|+.++++++. ..+++++||||||.+++.++..+++ .++++++++++..... ...+. ....+. .+
T Consensus 76 ~~~~a~dl~~ll~~l~----~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lil~~~~~~~~~-~~~~~~~~~~~~~-~~ 147 (295)
T PRK03592 76 FADHARYLDAWFDALG----LDDVVLVGHDWGSALGFDWAARHPD--RVRGIAFMEAIVRPMT-WDDFPPAVRELFQ-AL 147 (295)
T ss_pred HHHHHHHHHHHHHHhC----CCCeEEEEECHHHHHHHHHHHhChh--heeEEEEECCCCCCcc-hhhcchhHHHHHH-HH
Confidence 2334577777777763 3689999999999999999999875 6899999886432211 00000 000000 00
Q ss_pred HH-HHHH-HHHhh----hhhhhccC-CCCCHHHHhhhccHHHHHHHHhhhccchhcHHHHHhhc--------------Cc
Q 000293 346 AN-GLID-ILRSN----KELFKGRA-KGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKS--------------ST 404 (1712)
Q Consensus 346 a~-~Lk~-~L~~~----~~lf~~~~-~~~Die~IlkaktlrEFDd~~t~~~~Gf~sv~eYYr~a--------------S~ 404 (1712)
.. .+.. .+... ...+.... ..+..+.+ ..+...+..+ .......++++.. ..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (295)
T PRK03592 148 RSPGEGEEMVLEENVFIERVLPGSILRPLSDEEM------AVYRRPFPTP-ESRRPTLSWPRELPIDGEPADVVALVEEY 220 (295)
T ss_pred hCcccccccccchhhHHhhcccCcccccCCHHHH------HHHHhhcCCc-hhhhhhhhhhhhcCCCCcchhhHhhhhHh
Confidence 00 0000 00000 00010000 00111100 0000000000 0000001111110 01
Q ss_pred chhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHHHhh
Q 000293 405 RSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVELG 478 (1712)
Q Consensus 405 ~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~~~ 478 (1712)
...+.+|++|+|+|+| +|+++++...........|+.++.+++++||..+.+. ...+.+.+.+|+++...+
T Consensus 221 ~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~---p~~v~~~i~~fl~~~~~~ 292 (295)
T PRK03592 221 AQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDS---PEEIGAAIAAWLRRLRLA 292 (295)
T ss_pred HHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcC---HHHHHHHHHHHHHHhccc
Confidence 2457889999999999 8999855444333344578899999998888777652 345889999999877654
No 11
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.78 E-value=1.1e-17 Score=202.21 Aligned_cols=268 Identities=14% Similarity=0.165 Sum_probs=158.2
Q ss_pred ceEEEEEEcCCCcEEEEE-ecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q 000293 185 EYQRVCVNTEDGGVISLD-WPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTT 263 (1712)
Q Consensus 185 ~YrRe~Ltt~DGg~LaLD-W~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~lts 263 (1712)
.+....+..+||..+.+. |... ....+++||++||+++ + ...+..++..+.++||+|+++|+||||.|+...
T Consensus 109 ~~~~~~~~~~~~~~l~~~~~~p~-----~~~~~~~Vl~lHG~~~-~-~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~ 181 (395)
T PLN02652 109 RWATSLFYGARRNALFCRSWAPA-----AGEMRGILIIIHGLNE-H-SGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLH 181 (395)
T ss_pred eEEEEEEECCCCCEEEEEEecCC-----CCCCceEEEEECCchH-H-HHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC
Confidence 355566788888887765 5432 1223579999999853 3 333567889999999999999999999997543
Q ss_pred CCCccc-CcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCC-CCCccEEEEecCCCChhhhhccCchhhHh
Q 000293 264 SRLFTA-ADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGE-RTPLTAVTCIDNPFDLEEATRSSPHHIAL 341 (1712)
Q Consensus 264 prly~a-~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge-~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly 341 (1712)
...+.. ...+|+.++++++...++..+++++||||||.+++.++. +++ ...+.++|+.++.+.+.... +....
T Consensus 182 ~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~---~~~~~- 256 (395)
T PLN02652 182 GYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAH---PIVGA- 256 (395)
T ss_pred CCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccch---HHHHH-
Confidence 322222 236899999999998888779999999999999987764 443 23688888887765442210 00000
Q ss_pred HHHHHHHHHHHHHhhhhhhhccCC-CCCHHHHhhhccHHHHHHHHhhhc--cchh---cHHHHHhhcC-cchhcCcCCcc
Q 000293 342 DEKLANGLIDILRSNKELFKGRAK-GFDVEKALSAKSVRDFEKAISMVS--YGFE---AIEDFYSKSS-TRSVVGNIKIP 414 (1712)
Q Consensus 342 ~~~La~~Lk~~L~~~~~lf~~~~~-~~Die~IlkaktlrEFDd~~t~~~--~Gf~---sv~eYYr~aS-~~~~L~kIkVP 414 (1712)
+ ..+...+.... .+..... .... .+........+..+. .|+. ...++++... ....+.+|++|
T Consensus 257 ---~-~~l~~~~~p~~-~~~~~~~~~~~~-----s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vP 326 (395)
T PLN02652 257 ---V-APIFSLVAPRF-QFKGANKRGIPV-----SRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVP 326 (395)
T ss_pred ---H-HHHHHHhCCCC-cccCcccccCCc-----CCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCC
Confidence 0 11111110000 0110000 0000 000000111111110 0111 1111111111 23567899999
Q ss_pred EEEEEe-CCCCCCCCChHHHHHh-cCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHHH
Q 000293 415 VLFIQN-DAGAVPPFSIPRSSIA-ENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVE 476 (1712)
Q Consensus 415 tLII~G-DDp~VP~~aip~~la~-~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~ 476 (1712)
+|+||| +|.++|+......... ..++..+.++++++|..+.+. . ...+.+.+.+||.+..
T Consensus 327 vLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~-~-~e~v~~~I~~FL~~~~ 388 (395)
T PLN02652 327 FMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEP-E-REEVGRDIIDWMEKRL 388 (395)
T ss_pred EEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCC-C-HHHHHHHHHHHHHHHh
Confidence 999999 9999987654432212 334578999999999876652 2 3346788999998653
No 12
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.78 E-value=1.6e-17 Score=190.75 Aligned_cols=254 Identities=14% Similarity=0.094 Sum_probs=144.1
Q ss_pred EEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC--
Q 000293 188 RVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSR-- 265 (1712)
Q Consensus 188 Re~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltspr-- 265 (1712)
...++. ||..+.+....+ .+++|||+||+++ +.. .|+.++..+..+ |+|+++|+||||.|+...+.
T Consensus 10 ~~~~~~-~~~~i~y~~~G~--------~~~~vlllHG~~~-~~~-~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~ 77 (294)
T PLN02824 10 TRTWRW-KGYNIRYQRAGT--------SGPALVLVHGFGG-NAD-HWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSA 77 (294)
T ss_pred CceEEE-cCeEEEEEEcCC--------CCCeEEEECCCCC-Chh-HHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccc
Confidence 334444 566776643321 2478999999854 333 456677777665 79999999999999754321
Q ss_pred ----Cccc-CcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccC-chhh
Q 000293 266 ----LFTA-ADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSS-PHHI 339 (1712)
Q Consensus 266 ----ly~a-~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl-~~~~ 339 (1712)
.|.. .+.+|+.++|+.+. ..++++|||||||++++.++.++++ +++++|+++++.......... ....
T Consensus 78 ~~~~~~~~~~~a~~l~~~l~~l~----~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lili~~~~~~~~~~~~~~~~~~ 151 (294)
T PLN02824 78 PPNSFYTFETWGEQLNDFCSDVV----GDPAFVICNSVGGVVGLQAAVDAPE--LVRGVMLINISLRGLHIKKQPWLGRP 151 (294)
T ss_pred cccccCCHHHHHHHHHHHHHHhc----CCCeEEEEeCHHHHHHHHHHHhChh--heeEEEEECCCcccccccccchhhhH
Confidence 2332 33567777776653 4689999999999999999999876 699999998754221100000 0000
Q ss_pred ---HhHHHHHH-HH-HHHHHh------hhhh----hhccCCCCCHHHHhhhccHHHHHHHHhhhcc--c-hhcHHHHHhh
Q 000293 340 ---ALDEKLAN-GL-IDILRS------NKEL----FKGRAKGFDVEKALSAKSVRDFEKAISMVSY--G-FEAIEDFYSK 401 (1712)
Q Consensus 340 ---ly~~~La~-~L-k~~L~~------~~~l----f~~~~~~~Die~IlkaktlrEFDd~~t~~~~--G-f~sv~eYYr~ 401 (1712)
.+...+.. .. ..+... .... +... ...+.+ .++ .+..+.. + .....+++..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---------~~~-~~~~~~~~~~~~~~~~~~~~~ 220 (294)
T PLN02824 152 FIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDD-SAVTDE---------LVE-AILRPGLEPGAVDVFLDFISY 220 (294)
T ss_pred HHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccCh-hhccHH---------HHH-HHHhccCCchHHHHHHHHhcc
Confidence 00000000 00 000000 0000 0000 000100 000 0110000 0 0001111111
Q ss_pred c---CcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHH
Q 000293 402 S---STRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSA 474 (1712)
Q Consensus 402 a---S~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~a 474 (1712)
. .....+++|++|+|+|+| +|+++|..... ...+..++.++++++++||..+.+. ...+.+.+.+||++
T Consensus 221 ~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~-~~~~~~~~~~~~~i~~~gH~~~~e~---p~~~~~~i~~fl~~ 293 (294)
T PLN02824 221 SGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGR-AYANFDAVEDFIVLPGVGHCPQDEA---PELVNPLIESFVAR 293 (294)
T ss_pred ccccchHHHHhhcCCCeEEEEecCCCCCChHHHH-HHHhcCCccceEEeCCCCCChhhhC---HHHHHHHHHHHHhc
Confidence 1 123458899999999999 89999876443 3455678889999998888777652 33588999999975
No 13
>PRK13604 luxD acyl transferase; Provisional
Probab=99.77 E-value=1.7e-17 Score=193.26 Aligned_cols=251 Identities=13% Similarity=0.093 Sum_probs=154.4
Q ss_pred EEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCC-CCCCCCCCCC
Q 000293 188 RVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGC-GGSPLTTSRL 266 (1712)
Q Consensus 188 Re~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGh-GgS~ltsprl 266 (1712)
...+.+.||..+...|..|.+ ......++||++||+++ .. .++..++.+|+++||.|+.||+||| |.|.......
T Consensus 11 ~~~~~~~dG~~L~Gwl~~P~~--~~~~~~~~vIi~HGf~~-~~-~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~ 86 (307)
T PRK13604 11 DHVICLENGQSIRVWETLPKE--NSPKKNNTILIASGFAR-RM-DHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEF 86 (307)
T ss_pred hheEEcCCCCEEEEEEEcCcc--cCCCCCCEEEEeCCCCC-Ch-HHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccC
Confidence 356789999999976665432 12334689999999854 43 3467799999999999999999998 8885432222
Q ss_pred cccCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhHhHHHHH
Q 000293 267 FTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLA 346 (1712)
Q Consensus 267 y~a~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~~La 346 (1712)
.......|+.++++|++++. ..+++++||||||.+++..+++. +++++|+.|+..++....+.
T Consensus 87 t~s~g~~Dl~aaid~lk~~~-~~~I~LiG~SmGgava~~~A~~~----~v~~lI~~sp~~~l~d~l~~------------ 149 (307)
T PRK13604 87 TMSIGKNSLLTVVDWLNTRG-INNLGLIAASLSARIAYEVINEI----DLSFLITAVGVVNLRDTLER------------ 149 (307)
T ss_pred cccccHHHHHHHHHHHHhcC-CCceEEEEECHHHHHHHHHhcCC----CCCEEEEcCCcccHHHHHHH------------
Confidence 12223689999999998864 46899999999999975554421 47888888877776533211
Q ss_pred HHHHHHHHhhhhhhhccC--CCCCHHHHhhhccHHHHHHHHhhhccchhcHHHHHhhcCcchhcCcCCccEEEEEe-CCC
Q 000293 347 NGLIDILRSNKELFKGRA--KGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAG 423 (1712)
Q Consensus 347 ~~Lk~~L~~~~~lf~~~~--~~~Die~IlkaktlrEFDd~~t~~~~Gf~sv~eYYr~aS~~~~L~kIkVPtLII~G-DDp 423 (1712)
.+..... .++-.. ...|..... -....|-.... .+++ +...++.+.+.++++|+|+||| +|+
T Consensus 150 -~~~~~~~----~~p~~~lp~~~d~~g~~--l~~~~f~~~~~--~~~~------~~~~s~i~~~~~l~~PvLiIHG~~D~ 214 (307)
T PRK13604 150 -ALGYDYL----SLPIDELPEDLDFEGHN--LGSEVFVTDCF--KHGW------DTLDSTINKMKGLDIPFIAFTANNDS 214 (307)
T ss_pred -hhhcccc----cCccccccccccccccc--ccHHHHHHHHH--hcCc------cccccHHHHHhhcCCCEEEEEcCCCC
Confidence 0000000 000000 000000000 00011110000 0011 1123455667888999999999 999
Q ss_pred CCCCCChHHH-HHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHHHhh---hccC
Q 000293 424 AVPPFSIPRS-SIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVELG---LLKG 482 (1712)
Q Consensus 424 ~VP~~aip~~-la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~~~---llkg 482 (1712)
+||+...... ......+..+.+++++.|.+.+. ...+..|.+.+-.+ +..|
T Consensus 215 lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~~--------~~~~~~~~~~~~~~~~~~~~~ 269 (307)
T PRK13604 215 WVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGEN--------LVVLRNFYQSVTKAAIALDNG 269 (307)
T ss_pred ccCHHHHHHHHHHhccCCcEEEEeCCCccccCcc--------hHHHHHHHHHHHHHHheecCC
Confidence 9998655332 22234678999999999977764 13456677766555 4555
No 14
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.77 E-value=9.2e-18 Score=191.82 Aligned_cols=277 Identities=13% Similarity=0.141 Sum_probs=173.5
Q ss_pred CcceEEEEEEcCCCcEEEEE-ecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC
Q 000293 183 KLEYQRVCVNTEDGGVISLD-WPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPL 261 (1712)
Q Consensus 183 ~v~YrRe~Ltt~DGg~LaLD-W~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~l 261 (1712)
.+.+...+++.++|..+... |... . ....+..|++|||+++.+ ...+..++..++..||.|+++|++|||+|..
T Consensus 24 ~~~~~~~~~~n~rG~~lft~~W~p~-~---~~~pr~lv~~~HG~g~~~-s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdG 98 (313)
T KOG1455|consen 24 GVTYSESFFTNPRGAKLFTQSWLPL-S---GTEPRGLVFLCHGYGEHS-SWRYQSTAKRLAKSGFAVYAIDYEGHGRSDG 98 (313)
T ss_pred ccceeeeeEEcCCCCEeEEEecccC-C---CCCCceEEEEEcCCcccc-hhhHHHHHHHHHhCCCeEEEeeccCCCcCCC
Confidence 35566778899999877765 5532 1 123467899999985433 2346678999999999999999999999986
Q ss_pred CCCCCcccC-cHHHHHHHHHHHHhh--CCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchh
Q 000293 262 TTSRLFTAA-DSDDICTAIQFIGKA--RPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHH 338 (1712)
Q Consensus 262 tsprly~a~-~tdDL~aVLd~I~kr--yP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~ 338 (1712)
.....-... -++|+...++.++.+ ++..|.+++||||||++++.++.+.+. -..|++++++..-+.+..+..+..
T Consensus 99 l~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~--~w~G~ilvaPmc~i~~~~kp~p~v 176 (313)
T KOG1455|consen 99 LHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPN--FWDGAILVAPMCKISEDTKPHPPV 176 (313)
T ss_pred CcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCc--ccccceeeecccccCCccCCCcHH
Confidence 554433332 358888888886544 667799999999999999999988554 688999988877766555432211
Q ss_pred hHhHHHHHHHHHHHHHhhhhhhhccCCCCCHHHHhhhccHHHH---HHHHhhhccchhcHHHHHhhcC-cchhcCcCCcc
Q 000293 339 IALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDF---EKAISMVSYGFEAIEDFYSKSS-TRSVVGNIKIP 414 (1712)
Q Consensus 339 ~ly~~~La~~Lk~~L~~~~~lf~~~~~~~Die~IlkaktlrEF---Dd~~t~~~~Gf~sv~eYYr~aS-~~~~L~kIkVP 414 (1712)
.. ++..+...+.+.+ ..+... ..+.+.+....+.+ |...+...-..++..++.+... ..+.+.+|++|
T Consensus 177 ~~----~l~~l~~liP~wk-~vp~~d---~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvP 248 (313)
T KOG1455|consen 177 IS----ILTLLSKLIPTWK-IVPTKD---IIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVP 248 (313)
T ss_pred HH----HHHHHHHhCCcee-ecCCcc---ccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhccccccc
Confidence 11 1112222232222 111110 01111111111111 1111100001234445544433 34668999999
Q ss_pred EEEEEe-CCCCCCCCChH-HHHHhcCCCeEEEEecCCCccccC-CCCchhHHHHHHHHHHHHH
Q 000293 415 VLFIQN-DAGAVPPFSIP-RSSIAENPFTSLLLCSCLPSSVIG-GGRAAESWCQNLVIEWLSA 474 (1712)
Q Consensus 415 tLII~G-DDp~VP~~aip-~~la~~nPnv~LvLt~gGHH~gF~-e~~~~~sWv~r~VlEFL~a 474 (1712)
.|++|| +|.++.+.... ....+......+.+|||.=|+.+. +......-+...|.+||++
T Consensus 249 flilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~ 311 (313)
T KOG1455|consen 249 FLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDE 311 (313)
T ss_pred EEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHh
Confidence 999999 66666555332 223345677899999999998876 3333445678899999975
No 15
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.76 E-value=1.4e-17 Score=192.41 Aligned_cols=266 Identities=11% Similarity=0.066 Sum_probs=146.4
Q ss_pred cCCcceEEEEEEcCC--CcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCC
Q 000293 181 EGKLEYQRVCVNTED--GGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGG 258 (1712)
Q Consensus 181 ~p~v~YrRe~Ltt~D--Gg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGg 258 (1712)
.+.+++...++++++ |+.+.+.+... ..+.+|+|||+||+++ + ...|..++..|.++||+|+++|+||||.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~i~y~~~-----G~~~~~~lvliHG~~~-~-~~~w~~~~~~L~~~gy~vi~~Dl~G~G~ 86 (302)
T PRK00870 14 LPDYPFAPHYVDVDDGDGGPLRMHYVDE-----GPADGPPVLLLHGEPS-W-SYLYRKMIPILAAAGHRVIAPDLIGFGR 86 (302)
T ss_pred CcCCCCCceeEeecCCCCceEEEEEEec-----CCCCCCEEEEECCCCC-c-hhhHHHHHHHHHhCCCEEEEECCCCCCC
Confidence 456677777777765 45434333321 1123589999999843 3 3345678888888899999999999999
Q ss_pred CCCCCC-CCcc-cCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhh--hcc
Q 000293 259 SPLTTS-RLFT-AADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEA--TRS 334 (1712)
Q Consensus 259 S~ltsp-rly~-a~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~--~~s 334 (1712)
|..... ..|+ ....+|+.++++++ +..+++++||||||.+++.++..+++ .+.+++++++....... ...
T Consensus 87 S~~~~~~~~~~~~~~a~~l~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~ 160 (302)
T PRK00870 87 SDKPTRREDYTYARHVEWMRSWFEQL----DLTDVTLVCQDWGGLIGLRLAAEHPD--RFARLVVANTGLPTGDGPMPDA 160 (302)
T ss_pred CCCCCCcccCCHHHHHHHHHHHHHHc----CCCCEEEEEEChHHHHHHHHHHhChh--heeEEEEeCCCCCCccccchHH
Confidence 964321 2232 23356666666654 34589999999999999999998865 68899888764321110 000
Q ss_pred CchhhHhHHHHH-HHHHHHHHhhhhhhhccCCCCCHHHHhh----------hccHHHHHHHHhhhccchhcHHHHHhhcC
Q 000293 335 SPHHIALDEKLA-NGLIDILRSNKELFKGRAKGFDVEKALS----------AKSVRDFEKAISMVSYGFEAIEDFYSKSS 403 (1712)
Q Consensus 335 l~~~~ly~~~La-~~Lk~~L~~~~~lf~~~~~~~Die~Ilk----------aktlrEFDd~~t~~~~Gf~sv~eYYr~aS 403 (1712)
......+..... ..+...+... + ......+.... ....+.+.. +. ..+.... .+.....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~-~~~~~~~ 230 (302)
T PRK00870 161 FWAWRAFSQYSPVLPVGRLVNGG---T---VRDLSDAVRAAYDAPFPDESYKAGARAFPL-LV--PTSPDDP-AVAANRA 230 (302)
T ss_pred HhhhhcccccCchhhHHHHhhcc---c---cccCCHHHHHHhhcccCChhhhcchhhhhh-cC--CCCCCCc-chHHHHH
Confidence 000000000000 0000000000 0 00000000000 000000000 00 0000000 0000001
Q ss_pred cchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeE---EEEecCCCccccCCCCchhHHHHHHHHHHHHH
Q 000293 404 TRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTS---LLLCSCLPSSVIGGGRAAESWCQNLVIEWLSA 474 (1712)
Q Consensus 404 ~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~nPnv~---LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~a 474 (1712)
....+.+|++|+|+|+| .|+++|... ..+.+..|+.. ++++++++|..+.+. + ..+.+.+.+||+.
T Consensus 231 ~~~~l~~i~~P~lii~G~~D~~~~~~~--~~~~~~~~~~~~~~~~~i~~~gH~~~~e~--p-~~~~~~l~~fl~~ 300 (302)
T PRK00870 231 AWAVLERWDKPFLTAFSDSDPITGGGD--AILQKRIPGAAGQPHPTIKGAGHFLQEDS--G-EELAEAVLEFIRA 300 (302)
T ss_pred HHHhhhcCCCceEEEecCCCCcccCch--HHHHhhcccccccceeeecCCCccchhhC--h-HHHHHHHHHHHhc
Confidence 12457899999999999 899998754 34556677765 788999888777652 3 4578899999864
No 16
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.75 E-value=2.8e-17 Score=194.27 Aligned_cols=269 Identities=12% Similarity=0.160 Sum_probs=153.1
Q ss_pred EEcCCCcEEEEE-ecCCCcccccCCCCcEEEEeCCCCCCChhHHH------------------------HHHHHHHHhCC
Q 000293 191 VNTEDGGVISLD-WPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRI------------------------RLFVCEALRRG 245 (1712)
Q Consensus 191 Ltt~DGg~LaLD-W~~~~~~~~~~~~~PtVVLLHGltGGS~~sYi------------------------r~La~~Llq~G 245 (1712)
++..||..+.+. |... ..+.+|+|+||+++.+...|+ ..++..|.++|
T Consensus 2 ~~~~~g~~l~~~~~~~~-------~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G 74 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK-------NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNG 74 (332)
T ss_pred ccCCCCCeEEEeeeecc-------CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCC
Confidence 456789888764 5532 245799999999776643444 35688999999
Q ss_pred cEEEEEcCCCCCCCCCCCC-CCc--cc-CcHHHHHHHHHHHHh-------------------hCC-CCcEEEEEecHHHH
Q 000293 246 FFPVVMNPRGCGGSPLTTS-RLF--TA-ADSDDICTAIQFIGK-------------------ARP-WTTLMSVGWGYGAN 301 (1712)
Q Consensus 246 YrVVVfD~RGhGgS~ltsp-rly--~a-~~tdDL~aVLd~I~k-------------------ryP-~spLvLVGhSMGG~ 301 (1712)
|+|+++|+||||+|..... +.+ .. ...+|+..+++.+++ .+| ..|++++||||||+
T Consensus 75 ~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~ 154 (332)
T TIGR01607 75 YSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGN 154 (332)
T ss_pred CcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccH
Confidence 9999999999999864322 221 11 235788888888765 466 67999999999999
Q ss_pred HHHHHHHHcCCC------CCccEEEEecCCCChhhhhccCchhhHhHHHHHHHHHHHHHhhhhhhh-ccCCCCCHHHHhh
Q 000293 302 MLTKYLAEVGER------TPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFK-GRAKGFDVEKALS 374 (1712)
Q Consensus 302 IaL~YLge~ge~------s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~~La~~Lk~~L~~~~~lf~-~~~~~~Die~Ilk 374 (1712)
+++.|+...+.. ..++|++++++++.+.......... +.. +...+.+.+.+....+. .....++.+..
T Consensus 155 i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~--~~~-~~~~l~~~~~~~~p~~~~~~~~~~~~~~~-- 229 (332)
T TIGR01607 155 IALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFK--FKY-FYLPVMNFMSRVFPTFRISKKIRYEKSPY-- 229 (332)
T ss_pred HHHHHHHHhccccccccccccceEEEeccceEEecccCCCcch--hhh-hHHHHHHHHHHHCCcccccCccccccChh--
Confidence 999999765431 3689999899888653211000000 000 00111111111100000 00000110000
Q ss_pred hccHHHHHHHHhhhccchhcHHHHHhhcC-cchhcCcC--CccEEEEEe-CCCCCCCCChHHHH-HhcCCCeEEEEecCC
Q 000293 375 AKSVRDFEKAISMVSYGFEAIEDFYSKSS-TRSVVGNI--KIPVLFIQN-DAGAVPPFSIPRSS-IAENPFTSLLLCSCL 449 (1712)
Q Consensus 375 aktlrEFDd~~t~~~~Gf~sv~eYYr~aS-~~~~L~kI--kVPtLII~G-DDp~VP~~aip~~l-a~~nPnv~LvLt~gG 449 (1712)
.......|.........+....+++.... ....+..+ ++|+|+|+| +|+++++....... ....++..+.+++++
T Consensus 230 ~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~ 309 (332)
T TIGR01607 230 VNDIIKFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDM 309 (332)
T ss_pred hhhHHhcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCC
Confidence 00111112111100011112222222211 12245556 799999999 89999875443221 223477899999999
Q ss_pred CccccCCCCchhHHHHHHHHHHHH
Q 000293 450 PSSVIGGGRAAESWCQNLVIEWLS 473 (1712)
Q Consensus 450 HH~gF~e~~~~~sWv~r~VlEFL~ 473 (1712)
+|..+.+.. ..-+.+.+.+||.
T Consensus 310 ~H~i~~E~~--~~~v~~~i~~wL~ 331 (332)
T TIGR01607 310 DHVITIEPG--NEEVLKKIIEWIS 331 (332)
T ss_pred CCCCccCCC--HHHHHHHHHHHhh
Confidence 998887632 2336678888874
No 17
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.75 E-value=6.9e-17 Score=182.73 Aligned_cols=237 Identities=14% Similarity=0.049 Sum_probs=134.0
Q ss_pred CCcEEEEeCCCCCCChhHH--HHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC-CcccCcHHHHHHHHHHHHhhCCCCcE
Q 000293 215 LDTTLLLVPGTAEGSIEKR--IRLFVCEALRRGFFPVVMNPRGCGGSPLTTSR-LFTAADSDDICTAIQFIGKARPWTTL 291 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sY--ir~La~~Llq~GYrVVVfD~RGhGgS~ltspr-ly~a~~tdDL~aVLd~I~kryP~spL 291 (1712)
.+|+||||||+++ +...| +...+..+.+.||+|+++|+||||.|+..... .+.....+|+.++++++. ..++
T Consensus 29 ~~~~ivllHG~~~-~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~----~~~~ 103 (282)
T TIGR03343 29 NGEAVIMLHGGGP-GAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALD----IEKA 103 (282)
T ss_pred CCCeEEEECCCCC-chhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHcC----CCCe
Confidence 3578999999843 33222 12334567788999999999999999643211 112234678877777763 4689
Q ss_pred EEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchh--hHhHHHH----HHHHHHHHHhhhhhhhccCC
Q 000293 292 MSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHH--IALDEKL----ANGLIDILRSNKELFKGRAK 365 (1712)
Q Consensus 292 vLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~--~ly~~~L----a~~Lk~~L~~~~~lf~~~~~ 365 (1712)
+++||||||.+++.|+.++++ +++++|+++++..........+.. ..+...+ ...+...+... .+.. .
T Consensus 104 ~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~ 177 (282)
T TIGR03343 104 HLVGNSMGGATALNFALEYPD--RIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVF--LFDQ--S 177 (282)
T ss_pred eEEEECchHHHHHHHHHhChH--hhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhC--ccCc--c
Confidence 999999999999999998865 688999998653211000000000 0000000 00000110000 0000 0
Q ss_pred CCCHHHHhhhccHHHH------HHHHhhhccchhcHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcC
Q 000293 366 GFDVEKALSAKSVRDF------EKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAEN 438 (1712)
Q Consensus 366 ~~Die~IlkaktlrEF------Dd~~t~~~~Gf~sv~eYYr~aS~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~n 438 (1712)
..+. .... .....+ ...+.... ... .+........+++|++|+|+|+| +|+++|+.... ...+..
T Consensus 178 ~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~-~~~~~~ 249 (282)
T TIGR03343 178 LITE-ELLQ-GRWENIQRQPEHLKNFLISS-QKA----PLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGL-KLLWNM 249 (282)
T ss_pred cCcH-HHHH-hHHHHhhcCHHHHHHHHHhc-ccc----ccccchHHHHHhhCCCCEEEEEccCCCcCCchhHH-HHHHhC
Confidence 0000 0000 000000 00000000 000 00011123457899999999999 99999876544 345678
Q ss_pred CCeEEEEecCCCccccCCCCchhHHHHHHHHHHHH
Q 000293 439 PFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLS 473 (1712)
Q Consensus 439 Pnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~ 473 (1712)
|++++++++++||+...+. ...+.+.+.+||+
T Consensus 250 ~~~~~~~i~~agH~~~~e~---p~~~~~~i~~fl~ 281 (282)
T TIGR03343 250 PDAQLHVFSRCGHWAQWEH---ADAFNRLVIDFLR 281 (282)
T ss_pred CCCEEEEeCCCCcCCcccC---HHHHHHHHHHHhh
Confidence 9999999999899877752 3457889999985
No 18
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.74 E-value=4.1e-17 Score=176.19 Aligned_cols=231 Identities=14% Similarity=0.141 Sum_probs=127.5
Q ss_pred cEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEEEEe
Q 000293 217 TTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGW 296 (1712)
Q Consensus 217 PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spLvLVGh 296 (1712)
|+||++||++ ++. .+++.++..+. .+|+|+++|+||||.|....+ + ++..+++.+.... ..+++++||
T Consensus 5 ~~iv~~HG~~-~~~-~~~~~~~~~l~-~~~~vi~~d~~G~G~s~~~~~--~------~~~~~~~~~~~~~-~~~~~lvG~ 72 (245)
T TIGR01738 5 VHLVLIHGWG-MNA-EVFRCLDEELS-AHFTLHLVDLPGHGRSRGFGP--L------SLADAAEAIAAQA-PDPAIWLGW 72 (245)
T ss_pred ceEEEEcCCC-Cch-hhHHHHHHhhc-cCeEEEEecCCcCccCCCCCC--c------CHHHHHHHHHHhC-CCCeEEEEE
Confidence 7899999973 343 34566776664 579999999999999864321 1 2333333333332 258999999
Q ss_pred cHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccC-c-hhhHhH---HHHHHHHHHHHHhhhhhhhccCCCCCHHH
Q 000293 297 GYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSS-P-HHIALD---EKLANGLIDILRSNKELFKGRAKGFDVEK 371 (1712)
Q Consensus 297 SMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl-~-~~~ly~---~~La~~Lk~~L~~~~~lf~~~~~~~Die~ 371 (1712)
||||.+++.++.++++ .+.++|++++........... . ....+. ..+.......+........ ........
T Consensus 73 S~Gg~~a~~~a~~~p~--~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~- 148 (245)
T TIGR01738 73 SLGGLVALHIAATHPD--RVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQT-LGTPTARQ- 148 (245)
T ss_pred cHHHHHHHHHHHHCHH--hhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHH-hcCCccch-
Confidence 9999999999998765 588888876543221110000 0 000010 0011111111111100000 00000000
Q ss_pred HhhhccHHHHHHHHhhh-c---cchhcHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEe
Q 000293 372 ALSAKSVRDFEKAISMV-S---YGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLC 446 (1712)
Q Consensus 372 IlkaktlrEFDd~~t~~-~---~Gf~sv~eYYr~aS~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~nPnv~LvLt 446 (1712)
....+...+... . ..+....+.+...+....+.+|++|+|+|+| +|+++|+.... ...+..|++++.++
T Consensus 149 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~-~~~~~~~~~~~~~~ 222 (245)
T TIGR01738 149 -----DARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVP-YLDKLAPHSELYIF 222 (245)
T ss_pred -----HHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHH-HHHHhCCCCeEEEe
Confidence 001111111100 0 0111111122223344568899999999999 99999876433 34567899999999
Q ss_pred cCCCccccCCCCchhHHHHHHHHHHH
Q 000293 447 SCLPSSVIGGGRAAESWCQNLVIEWL 472 (1712)
Q Consensus 447 ~gGHH~gF~e~~~~~sWv~r~VlEFL 472 (1712)
+++||..+.+ . ...+.+.+.+|+
T Consensus 223 ~~~gH~~~~e--~-p~~~~~~i~~fi 245 (245)
T TIGR01738 223 AKAAHAPFLS--H-AEAFCALLVAFK 245 (245)
T ss_pred CCCCCCcccc--C-HHHHHHHHHhhC
Confidence 9988887775 2 335678888874
No 19
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.74 E-value=1.1e-16 Score=179.04 Aligned_cols=238 Identities=16% Similarity=0.136 Sum_probs=132.9
Q ss_pred CcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCccc-CcHHHHHHHHHHHHhhCCCCcEEEE
Q 000293 216 DTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTA-ADSDDICTAIQFIGKARPWTTLMSV 294 (1712)
Q Consensus 216 ~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a-~~tdDL~aVLd~I~kryP~spLvLV 294 (1712)
+|+||++||++ ++... ++.++..+. ++|+|+++|+||||.|.......++. ...+|+.++++.+ ...+++++
T Consensus 28 ~~~vv~~hG~~-~~~~~-~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~----~~~~~~lv 100 (278)
T TIGR03056 28 GPLLLLLHGTG-ASTHS-WRDLMPPLA-RSFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAE----GLSPDGVI 100 (278)
T ss_pred CCeEEEEcCCC-CCHHH-HHHHHHHHh-hCcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHc----CCCCceEE
Confidence 58999999984 44444 455666654 57999999999999986543322322 2345666665543 34678999
Q ss_pred EecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhcc--Cchhh--HhHHHHHHHHHHHHHhh----hhhhhccCCC
Q 000293 295 GWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRS--SPHHI--ALDEKLANGLIDILRSN----KELFKGRAKG 366 (1712)
Q Consensus 295 GhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~s--l~~~~--ly~~~La~~Lk~~L~~~----~~lf~~~~~~ 366 (1712)
||||||++++.++..+++ ++.+++++++.+........ .++.. .....+...+....... ...+......
T Consensus 101 G~S~Gg~~a~~~a~~~p~--~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (278)
T TIGR03056 101 GHSAGAAIALRLALDGPV--TPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQRVERLIRDTGSL 178 (278)
T ss_pred EECccHHHHHHHHHhCCc--ccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCcchhHHhhccccc
Confidence 999999999999988764 57888888776543221111 01000 00000000000000000 0000000000
Q ss_pred CCHHHHhhhccHHHHHHHHhhhccchhcHHHHHhhc---CcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeE
Q 000293 367 FDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKS---STRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTS 442 (1712)
Q Consensus 367 ~Die~IlkaktlrEFDd~~t~~~~Gf~sv~eYYr~a---S~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~nPnv~ 442 (1712)
.+ ....+.+...+.. ...+....++.... .....+++|++|+|+|+| +|.++|+... ....+.+|+++
T Consensus 179 ~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~-~~~~~~~~~~~ 250 (278)
T TIGR03056 179 LD------KAGMTYYGRLIRS-PAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDES-KRAATRVPTAT 250 (278)
T ss_pred cc------cchhhHHHHhhcC-chhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHH-HHHHHhccCCe
Confidence 00 0001111111110 00111111222111 123457889999999999 8999987643 34556789999
Q ss_pred EEEecCCCccccCCCCchhHHHHHHHHHHHH
Q 000293 443 LLLCSCLPSSVIGGGRAAESWCQNLVIEWLS 473 (1712)
Q Consensus 443 LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~ 473 (1712)
+++++++||..+.+ .+ ..+.+.+.+||+
T Consensus 251 ~~~~~~~gH~~~~e--~p-~~~~~~i~~f~~ 278 (278)
T TIGR03056 251 LHVVPGGGHLVHEE--QA-DGVVGLILQAAE 278 (278)
T ss_pred EEEECCCCCccccc--CH-HHHHHHHHHHhC
Confidence 99999999987775 23 347788888873
No 20
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.74 E-value=4.5e-17 Score=176.12 Aligned_cols=236 Identities=12% Similarity=0.126 Sum_probs=132.7
Q ss_pred CCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEEE
Q 000293 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSV 294 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spLvLV 294 (1712)
.+|+||++||+ +++. ..++.++..+ ..||+|+++|+||||.|.............+|+.++++.+ +..+++++
T Consensus 12 ~~~~li~~hg~-~~~~-~~~~~~~~~l-~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~----~~~~v~li 84 (251)
T TIGR02427 12 GAPVLVFINSL-GTDL-RMWDPVLPAL-TPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHL----GIERAVFC 84 (251)
T ss_pred CCCeEEEEcCc-ccch-hhHHHHHHHh-hcccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCceEEE
Confidence 45899999997 3343 3445566555 5789999999999999864322221122345555555544 34689999
Q ss_pred EecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhHhHHHHHHHHHHHHHhh-hhhhhccCCCCCHHHHh
Q 000293 295 GWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSN-KELFKGRAKGFDVEKAL 373 (1712)
Q Consensus 295 GhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~~La~~Lk~~L~~~-~~lf~~~~~~~Die~Il 373 (1712)
||||||++++.++.+.++ .+.++++++++........ +...+.......+....... ...+.......+.
T Consensus 85 G~S~Gg~~a~~~a~~~p~--~v~~li~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 155 (251)
T TIGR02427 85 GLSLGGLIAQGLAARRPD--RVRALVLSNTAAKIGTPES---WNARIAAVRAEGLAALADAVLERWFTPGFREAHP---- 155 (251)
T ss_pred EeCchHHHHHHHHHHCHH--HhHHHhhccCccccCchhh---HHHHHhhhhhccHHHHHHHHHHHHcccccccCCh----
Confidence 999999999999988754 5788887775533211100 00000000000000000000 0011100000000
Q ss_pred hhccHHHHHHHHh-hhccchhcHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCc
Q 000293 374 SAKSVRDFEKAIS-MVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPS 451 (1712)
Q Consensus 374 kaktlrEFDd~~t-~~~~Gf~sv~eYYr~aS~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH 451 (1712)
.....+.+.+. ....+|.....++........+.++++|+|+|+| +|+++|..... ...+..++.++.++++++|
T Consensus 156 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~gH 232 (251)
T TIGR02427 156 --ARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVR-EIADLVPGARFAEIRGAGH 232 (251)
T ss_pred --HHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHH-HHHHhCCCceEEEECCCCC
Confidence 00111111111 1111222223333444445668889999999999 89999876543 3456678899999998888
Q ss_pred cccCCCCchhHHHHHHHHHHH
Q 000293 452 SVIGGGRAAESWCQNLVIEWL 472 (1712)
Q Consensus 452 ~gF~e~~~~~sWv~r~VlEFL 472 (1712)
..+.+. +. .+.+.+.+||
T Consensus 233 ~~~~~~--p~-~~~~~i~~fl 250 (251)
T TIGR02427 233 IPCVEQ--PE-AFNAALRDFL 250 (251)
T ss_pred cccccC--hH-HHHHHHHHHh
Confidence 777652 33 4577888886
No 21
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.73 E-value=1e-16 Score=182.58 Aligned_cols=253 Identities=13% Similarity=0.200 Sum_probs=145.3
Q ss_pred EEEEcCCCcEEEEE-ecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCc
Q 000293 189 VCVNTEDGGVISLD-WPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLF 267 (1712)
Q Consensus 189 e~Ltt~DGg~LaLD-W~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly 267 (1712)
+.+++ ||.++++. |... ...++|||+||+++ +.. .|+.++..| ..+|+|+++|+||||.|..... .|
T Consensus 5 ~~~~~-~~~~~~~~~~~~~-------~~~~plvllHG~~~-~~~-~w~~~~~~L-~~~~~vi~~Dl~G~G~S~~~~~-~~ 72 (276)
T TIGR02240 5 RTIDL-DGQSIRTAVRPGK-------EGLTPLLIFNGIGA-NLE-LVFPFIEAL-DPDLEVIAFDVPGVGGSSTPRH-PY 72 (276)
T ss_pred EEecc-CCcEEEEEEecCC-------CCCCcEEEEeCCCc-chH-HHHHHHHHh-ccCceEEEECCCCCCCCCCCCC-cC
Confidence 34444 77777763 2211 12478999999843 433 456667665 4579999999999999974322 22
Q ss_pred c-cCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhHhHHHHH
Q 000293 268 T-AADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLA 346 (1712)
Q Consensus 268 ~-a~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~~La 346 (1712)
. ....+|+.++++++. ..++++|||||||.+++.++.++++ .++++|+++++......... +.... .+.
T Consensus 73 ~~~~~~~~~~~~i~~l~----~~~~~LvG~S~GG~va~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~-~~~~~---~~~ 142 (276)
T TIGR02240 73 RFPGLAKLAARMLDYLD----YGQVNAIGVSWGGALAQQFAHDYPE--RCKKLILAATAAGAVMVPGK-PKVLM---MMA 142 (276)
T ss_pred cHHHHHHHHHHHHHHhC----cCceEEEEECHHHHHHHHHHHHCHH--HhhheEEeccCCccccCCCc-hhHHH---Hhc
Confidence 2 234578888888763 3579999999999999999998875 69999999877543110000 00000 000
Q ss_pred HHHHHHHHh------hhhhhhccCCCCCHHHHhhhccHHHHHHHH-hhhccchhcHHHHHh--hcCcchhcCcCCccEEE
Q 000293 347 NGLIDILRS------NKELFKGRAKGFDVEKALSAKSVRDFEKAI-SMVSYGFEAIEDFYS--KSSTRSVVGNIKIPVLF 417 (1712)
Q Consensus 347 ~~Lk~~L~~------~~~lf~~~~~~~Die~IlkaktlrEFDd~~-t~~~~Gf~sv~eYYr--~aS~~~~L~kIkVPtLI 417 (1712)
. ....+.. ....+.... ..+.+.+ ..+.... .....++ ...++. .......+.+|++|+|+
T Consensus 143 ~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~i~~P~li 212 (276)
T TIGR02240 143 S-PRRYIQPSHGIHIAPDIYGGAF-RRDPELA------MAHASKVRSGGKLGY--YWQLFAGLGWTSIHWLHKIQQPTLV 212 (276)
T ss_pred C-chhhhccccccchhhhhcccee-eccchhh------hhhhhhcccCCCchH--HHHHHHHcCCchhhHhhcCCCCEEE
Confidence 0 0000000 000000000 0000000 0000000 0000011 001111 11223558899999999
Q ss_pred EEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHHHhh
Q 000293 418 IQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVELG 478 (1712)
Q Consensus 418 I~G-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~~~ 478 (1712)
|+| +|+++|+.... .+....|+++++++++ ||..+.+ . ...+.+.+.+|+++...+
T Consensus 213 i~G~~D~~v~~~~~~-~l~~~~~~~~~~~i~~-gH~~~~e--~-p~~~~~~i~~fl~~~~~~ 269 (276)
T TIGR02240 213 LAGDDDPIIPLINMR-LLAWRIPNAELHIIDD-GHLFLIT--R-AEAVAPIIMKFLAEERQR 269 (276)
T ss_pred EEeCCCCcCCHHHHH-HHHHhCCCCEEEEEcC-CCchhhc--c-HHHHHHHHHHHHHHhhhh
Confidence 999 89999886543 3456789999999987 6655554 2 345789999999987655
No 22
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.73 E-value=6.3e-16 Score=171.45 Aligned_cols=256 Identities=14% Similarity=0.143 Sum_probs=135.0
Q ss_pred CCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC--Cccc-C
Q 000293 194 EDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSR--LFTA-A 270 (1712)
Q Consensus 194 ~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltspr--ly~a-~ 270 (1712)
.||+.+.+..... .+.+++||++||+++ +...|+..+...+.+.||+|+++|+||||.|...... .+.. .
T Consensus 9 ~~~~~~~~~~~~~------~~~~~~vl~~hG~~g-~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~ 81 (288)
T TIGR01250 9 VDGGYHLFTKTGG------EGEKIKLLLLHGGPG-MSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDY 81 (288)
T ss_pred CCCCeEEEEeccC------CCCCCeEEEEcCCCC-ccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHH
Confidence 4666666544332 123588999999755 4445666666666666999999999999998643211 1221 2
Q ss_pred cHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCch-hhHhHHHHHHHH
Q 000293 271 DSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPH-HIALDEKLANGL 349 (1712)
Q Consensus 271 ~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~-~~ly~~~La~~L 349 (1712)
..+|+.+++++ ....+++++||||||.+++.++..+++ ++.+++++++............. ...+...+...+
T Consensus 82 ~~~~~~~~~~~----~~~~~~~liG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (288)
T TIGR01250 82 FVDELEEVREK----LGLDKFYLLGHSWGGMLAQEYALKYGQ--HLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAI 155 (288)
T ss_pred HHHHHHHHHHH----cCCCcEEEEEeehHHHHHHHHHHhCcc--ccceeeEecccccchHHHHHHHHHHhhcChhHHHHH
Confidence 23455444444 344679999999999999999998865 58888877654432211110000 000000000000
Q ss_pred HHHHHhhhhhhhccCCCCCHHHHhh-------------hccHHHHHH----HHhhhccchhc--HHHHHhhcCcchhcCc
Q 000293 350 IDILRSNKELFKGRAKGFDVEKALS-------------AKSVRDFEK----AISMVSYGFEA--IEDFYSKSSTRSVVGN 410 (1712)
Q Consensus 350 k~~L~~~~~lf~~~~~~~Die~Ilk-------------aktlrEFDd----~~t~~~~Gf~s--v~eYYr~aS~~~~L~k 410 (1712)
...... ..+. ......... ......+.. .+.....+... ....+........+.+
T Consensus 156 ~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 229 (288)
T TIGR01250 156 KRCEAS--GDYD----NPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSE 229 (288)
T ss_pred HHHHhc--cCcc----hHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhc
Confidence 000000 0000 000000000 000000000 00000000000 0001111223356788
Q ss_pred CCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHH
Q 000293 411 IKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLS 473 (1712)
Q Consensus 411 IkVPtLII~G-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~ 473 (1712)
|++|+|+++| +|.+ ++... ....+..|++++++++++||..+.+. ...+.+.+.+||+
T Consensus 230 i~~P~lii~G~~D~~-~~~~~-~~~~~~~~~~~~~~~~~~gH~~~~e~---p~~~~~~i~~fl~ 288 (288)
T TIGR01250 230 IKVPTLLTVGEFDTM-TPEAA-REMQELIAGSRLVVFPDGSHMTMIED---PEVYFKLLSDFIR 288 (288)
T ss_pred cCCCEEEEecCCCcc-CHHHH-HHHHHhccCCeEEEeCCCCCCcccCC---HHHHHHHHHHHhC
Confidence 9999999999 7764 44433 34456678999999998888777752 3457788888873
No 23
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.73 E-value=1.1e-16 Score=175.19 Aligned_cols=237 Identities=16% Similarity=0.084 Sum_probs=131.7
Q ss_pred CCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCccc-CcHHHHHHHHHHHHhhCCCCcEEE
Q 000293 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTA-ADSDDICTAIQFIGKARPWTTLMS 293 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a-~~tdDL~aVLd~I~kryP~spLvL 293 (1712)
..|+||++||+++ +. .++..++..+ .+||+|+++|+||||.|....+..|.. .+.+|+.++++++. ..++++
T Consensus 12 ~~~~iv~lhG~~~-~~-~~~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~----~~~~~l 84 (257)
T TIGR03611 12 DAPVVVLSSGLGG-SG-SYWAPQLDVL-TQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALN----IERFHF 84 (257)
T ss_pred CCCEEEEEcCCCc-ch-hHHHHHHHHH-HhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhC----CCcEEE
Confidence 4689999999854 33 3455566554 567999999999999997544333332 23466666666553 367999
Q ss_pred EEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhHhHHHHHHH-HHHHHHhhhh-hhhccCCCCCHHH
Q 000293 294 VGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANG-LIDILRSNKE-LFKGRAKGFDVEK 371 (1712)
Q Consensus 294 VGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~~La~~-Lk~~L~~~~~-lf~~~~~~~Die~ 371 (1712)
+||||||.+++.+++.+++ .+.++|++++.......... ........+... ....+..... .++. . .
T Consensus 85 ~G~S~Gg~~a~~~a~~~~~--~v~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~ 153 (257)
T TIGR03611 85 VGHALGGLIGLQLALRYPE--RLLSLVLINAWSRPDPHTRR--CFDVRIALLQHAGPEAYVHAQALFLYPA-----D--W 153 (257)
T ss_pred EEechhHHHHHHHHHHChH--HhHHheeecCCCCCChhHHH--HHHHHHHHHhccCcchhhhhhhhhhccc-----c--H
Confidence 9999999999999998765 58888888754332111000 000000000000 0000000000 0000 0 0
Q ss_pred Hhhh-ccHHHHHHHHhhhccchhc---HHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEe
Q 000293 372 ALSA-KSVRDFEKAISMVSYGFEA---IEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLC 446 (1712)
Q Consensus 372 Ilka-ktlrEFDd~~t~~~~Gf~s---v~eYYr~aS~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~nPnv~LvLt 446 (1712)
+... ......+........+... ....+...+....+.+|++|+|+++| +|+++|+.... ...+..|++.+.++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~-~~~~~~~~~~~~~~ 232 (257)
T TIGR03611 154 ISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSL-RLAAALPNAQLKLL 232 (257)
T ss_pred hhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHH-HHHHhcCCceEEEE
Confidence 0000 0000000000000000000 01112223444668899999999999 89999876433 34566789999999
Q ss_pred cCCCccccCCCCchhHHHHHHHHHHHH
Q 000293 447 SCLPSSVIGGGRAAESWCQNLVIEWLS 473 (1712)
Q Consensus 447 ~gGHH~gF~e~~~~~sWv~r~VlEFL~ 473 (1712)
+++||..+.+ . ...+.+.+.+||+
T Consensus 233 ~~~gH~~~~~--~-~~~~~~~i~~fl~ 256 (257)
T TIGR03611 233 PYGGHASNVT--D-PETFNRALLDFLK 256 (257)
T ss_pred CCCCCCcccc--C-HHHHHHHHHHHhc
Confidence 9888866654 2 3457788888885
No 24
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.72 E-value=2.3e-16 Score=167.27 Aligned_cols=209 Identities=17% Similarity=0.241 Sum_probs=122.9
Q ss_pred EEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-CCcc-cCcHHHHHHHHHHHHhhCCCCcEEEEEe
Q 000293 219 LLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTS-RLFT-AADSDDICTAIQFIGKARPWTTLMSVGW 296 (1712)
Q Consensus 219 VVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsp-rly~-a~~tdDL~aVLd~I~kryP~spLvLVGh 296 (1712)
|||+||+++ +. .++..++..| ++||+|+++|+||||.|..... ..+. ..+.+|+.++++.+. ..+++++||
T Consensus 1 vv~~hG~~~-~~-~~~~~~~~~l-~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~----~~~~~lvG~ 73 (228)
T PF12697_consen 1 VVFLHGFGG-SS-ESWDPLAEAL-ARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALG----IKKVILVGH 73 (228)
T ss_dssp EEEE-STTT-TG-GGGHHHHHHH-HTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTT----TSSEEEEEE
T ss_pred eEEECCCCC-CH-HHHHHHHHHH-hCCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccc----ccccccccc
Confidence 799999854 43 4456688877 5899999999999999975432 1111 123455555555543 368999999
Q ss_pred cHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhc-cCchhhHhHHHHH---HHHHHHHHhhhhhhhccCCCCCHHHH
Q 000293 297 GYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATR-SSPHHIALDEKLA---NGLIDILRSNKELFKGRAKGFDVEKA 372 (1712)
Q Consensus 297 SMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~-sl~~~~ly~~~La---~~Lk~~L~~~~~lf~~~~~~~Die~I 372 (1712)
||||.+++.|+..+++ .+.++++++++........ .. ...++...+. ......... .+.
T Consensus 74 S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~----------- 136 (228)
T PF12697_consen 74 SMGGMIALRLAARYPD--RVKGLVLLSPPPPLPDSPSRSF-GPSFIRRLLAWRSRSLRRLASR---FFY----------- 136 (228)
T ss_dssp THHHHHHHHHHHHSGG--GEEEEEEESESSSHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHHH---HHH-----------
T ss_pred cccccccccccccccc--ccccceeecccccccccccccc-cchhhhhhhhcccccccccccc---ccc-----------
Confidence 9999999999998775 7999999998886653220 00 0000000000 000000000 000
Q ss_pred hhhccHHHHHHHHhhhccchhcHHHHHh----hcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEec
Q 000293 373 LSAKSVRDFEKAISMVSYGFEAIEDFYS----KSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCS 447 (1712)
Q Consensus 373 lkaktlrEFDd~~t~~~~Gf~sv~eYYr----~aS~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~nPnv~LvLt~ 447 (1712)
......++.+.+.. ......++++ .......+.++++|+++|+| +|.++|.... ....+..|++++.+++
T Consensus 137 -~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~ 211 (228)
T PF12697_consen 137 -RWFDGDEPEDLIRS---SRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESA-EELADKLPNAELVVIP 211 (228)
T ss_dssp -HHHTHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHH-HHHHHHSTTEEEEEET
T ss_pred -cccccccccccccc---cccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHH-HHHHHHCCCCEEEEEC
Confidence 00000111111110 0011111111 12234667888999999999 8888884433 3345568999999999
Q ss_pred CCCccccCC
Q 000293 448 CLPSSVIGG 456 (1712)
Q Consensus 448 gGHH~gF~e 456 (1712)
+++|+.+.+
T Consensus 212 ~~gH~~~~~ 220 (228)
T PF12697_consen 212 GAGHFLFLE 220 (228)
T ss_dssp TSSSTHHHH
T ss_pred CCCCccHHH
Confidence 999987775
No 25
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.72 E-value=1.6e-16 Score=170.97 Aligned_cols=236 Identities=14% Similarity=0.170 Sum_probs=130.3
Q ss_pred CcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHH-HHHHHhhCCCCcEEEE
Q 000293 216 DTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTA-IQFIGKARPWTTLMSV 294 (1712)
Q Consensus 216 ~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aV-Ld~I~kryP~spLvLV 294 (1712)
+|+||++||+++ +.. .++.++..|. +||+|+++|+||||.|..... +.....+|+... +..+.++.+..+++++
T Consensus 1 ~~~vv~~hG~~~-~~~-~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 75 (251)
T TIGR03695 1 KPVLVFLHGFLG-SGA-DWQALIELLG-PHFRCLAIDLPGHGSSQSPDE--IERYDFEEAAQDILATLLDQLGIEPFFLV 75 (251)
T ss_pred CCEEEEEcCCCC-chh-hHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCc--cChhhHHHHHHHHHHHHHHHcCCCeEEEE
Confidence 378999999853 443 3567787777 899999999999999964321 112223344433 5666666667799999
Q ss_pred EecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhcc---CchhhHhHHHHHHH-HHHHHHhhh--hhhhccCCCCC
Q 000293 295 GWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRS---SPHHIALDEKLANG-LIDILRSNK--ELFKGRAKGFD 368 (1712)
Q Consensus 295 GhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~s---l~~~~ly~~~La~~-Lk~~L~~~~--~lf~~~~~~~D 368 (1712)
||||||.+++.|++.+++ .+.+++++++.......... ......+...+... ...++.... ..+... ...+
T Consensus 76 G~S~Gg~ia~~~a~~~~~--~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 152 (251)
T TIGR03695 76 GYSMGGRIALYYALQYPE--RVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQ-KNLP 152 (251)
T ss_pred EeccHHHHHHHHHHhCch--heeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeec-ccCC
Confidence 999999999999999875 58888888765443221110 00000000111100 001111000 001000 0001
Q ss_pred HHHHhhhccHHHHHHHHhhhccchhcHHHHHh------hcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCe
Q 000293 369 VEKALSAKSVRDFEKAISMVSYGFEAIEDFYS------KSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFT 441 (1712)
Q Consensus 369 ie~IlkaktlrEFDd~~t~~~~Gf~sv~eYYr------~aS~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~nPnv 441 (1712)
.... ..+...... . .......++. .......+.++++|+|+|+| +|+.++. .........+++
T Consensus 153 ~~~~------~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~--~~~~~~~~~~~~ 222 (251)
T TIGR03695 153 PEQR------QALRAKRLA-N-NPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFVQ--IAKEMQKLLPNL 222 (251)
T ss_pred hHHh------HHHHHhccc-c-cchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHHH--HHHHHHhcCCCC
Confidence 0000 000000000 0 0000111111 11223457789999999999 7876542 223345677899
Q ss_pred EEEEecCCCccccCCCCchhHHHHHHHHHHH
Q 000293 442 SLLLCSCLPSSVIGGGRAAESWCQNLVIEWL 472 (1712)
Q Consensus 442 ~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL 472 (1712)
++++++++||+.+.+. +. -+.+.+.+||
T Consensus 223 ~~~~~~~~gH~~~~e~--~~-~~~~~i~~~l 250 (251)
T TIGR03695 223 TLVIIANAGHNIHLEN--PE-AFAKILLAFL 250 (251)
T ss_pred cEEEEcCCCCCcCccC--hH-HHHHHHHHHh
Confidence 9999999888777753 33 4677888887
No 26
>PRK06489 hypothetical protein; Provisional
Probab=99.71 E-value=7.6e-16 Score=183.42 Aligned_cols=242 Identities=16% Similarity=0.165 Sum_probs=130.5
Q ss_pred CcEEEEeCCCCCCChhHHH-HHHHHHH-------HhCCcEEEEEcCCCCCCCCCCCCC------CcccCcHHHHHH-HHH
Q 000293 216 DTTLLLVPGTAEGSIEKRI-RLFVCEA-------LRRGFFPVVMNPRGCGGSPLTTSR------LFTAADSDDICT-AIQ 280 (1712)
Q Consensus 216 ~PtVVLLHGltGGS~~sYi-r~La~~L-------lq~GYrVVVfD~RGhGgS~ltspr------ly~a~~tdDL~a-VLd 280 (1712)
+|+|||+||+++ +...|. ..+...+ ...+|+|+++|+||||.|...... .|+ .+|+.. ++.
T Consensus 69 gpplvllHG~~~-~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~---~~~~a~~~~~ 144 (360)
T PRK06489 69 DNAVLVLHGTGG-SGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYD---YDDMVEAQYR 144 (360)
T ss_pred CCeEEEeCCCCC-chhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCccc---HHHHHHHHHH
Confidence 589999999854 443333 2344333 257899999999999999643221 122 234332 333
Q ss_pred HHHhhCCCCcEE-EEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhHhHHHHH-------------
Q 000293 281 FIGKARPWTTLM-SVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLA------------- 346 (1712)
Q Consensus 281 ~I~kryP~spLv-LVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~~La------------- 346 (1712)
.+....+..+++ ++||||||++++.++.++++ ++.++|++++........ ...........+.
T Consensus 145 ~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~--~V~~LVLi~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (360)
T PRK06489 145 LVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPD--FMDALMPMASQPTEMSGR-NWMWRRMLIESIRNDPAWNNGNYTTQ 221 (360)
T ss_pred HHHHhcCCCceeEEEEECHHHHHHHHHHHhCch--hhheeeeeccCcccccHH-HHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 343434445664 89999999999999999876 689999887642110000 0000000000000
Q ss_pred -HHHHHHHHhhh-------hhhhccCCCCCHHHHhhhccHHHHHHHHhhhccchhcHHHHH------hhcCcchhcCcCC
Q 000293 347 -NGLIDILRSNK-------ELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFY------SKSSTRSVVGNIK 412 (1712)
Q Consensus 347 -~~Lk~~L~~~~-------~lf~~~~~~~Die~IlkaktlrEFDd~~t~~~~Gf~sv~eYY------r~aS~~~~L~kIk 412 (1712)
..+........ ..+... ..+... ....++..+..... .....|. ...+....+.+|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~L~~I~ 292 (360)
T PRK06489 222 PPSLKRANPMFAIATSGGTLAYQAQ--APTRAA-----ADKLVDERLAAPVT--ADANDFLYQWDSSRDYNPSPDLEKIK 292 (360)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHh--cCChHH-----HHHHHHHHHHhhhh--cCHHHHHHHHHHhhccChHHHHHhCC
Confidence 00000000000 000000 000000 00011111111000 0111221 1123356788999
Q ss_pred ccEEEEEe-CCCCCCCCCh-HHHHHhcCCCeEEEEecCC----CccccCCCCchhHHHHHHHHHHHHHHHh
Q 000293 413 IPVLFIQN-DAGAVPPFSI-PRSSIAENPFTSLLLCSCL----PSSVIGGGRAAESWCQNLVIEWLSAVEL 477 (1712)
Q Consensus 413 VPtLII~G-DDp~VP~~ai-p~~la~~nPnv~LvLt~gG----HH~gF~e~~~~~sWv~r~VlEFL~av~~ 477 (1712)
+|+|+|+| +|.++|+... .....+..|+.++++++++ ||..+ + .+. .+.+.+.+||+.+.+
T Consensus 293 ~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e--~P~-~~~~~i~~FL~~~~~ 359 (360)
T PRK06489 293 APVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-G--SAK-FWKAYLAEFLAQVPK 359 (360)
T ss_pred CCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-c--CHH-HHHHHHHHHHHhccc
Confidence 99999999 8888887643 2345678999999999984 88765 3 344 578999999987653
No 27
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.71 E-value=8.7e-16 Score=177.30 Aligned_cols=264 Identities=13% Similarity=0.096 Sum_probs=138.3
Q ss_pred cceEEEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q 000293 184 LEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTT 263 (1712)
Q Consensus 184 v~YrRe~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~lts 263 (1712)
.++....+++ +|..+.+... +.+|+|||+||++. +. ..|+.++..| .++|+|+++|+||||.|....
T Consensus 12 ~~~~~~~~~~-~~~~i~y~~~---------G~~~~iv~lHG~~~-~~-~~~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~ 78 (286)
T PRK03204 12 YPFESRWFDS-SRGRIHYIDE---------GTGPPILLCHGNPT-WS-FLYRDIIVAL-RDRFRCVAPDYLGFGLSERPS 78 (286)
T ss_pred ccccceEEEc-CCcEEEEEEC---------CCCCEEEEECCCCc-cH-HHHHHHHHHH-hCCcEEEEECCCCCCCCCCCC
Confidence 3456666776 5666654322 13578999999743 22 2245556555 557999999999999996443
Q ss_pred CCCcccCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhHhHH
Q 000293 264 SRLFTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDE 343 (1712)
Q Consensus 264 prly~a~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~ 343 (1712)
...| ..+|+...+..+.++.+..+++++||||||.+++.|+..+++ +++++|+++++...........+...+..
T Consensus 79 ~~~~---~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 153 (286)
T PRK03204 79 GFGY---QIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERAD--RVRGVVLGNTWFWPADTLAMKAFSRVMSS 153 (286)
T ss_pred cccc---CHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChh--heeEEEEECccccCCCchhHHHHHHHhcc
Confidence 2222 235555555555555566789999999999999999988765 68999887665311110000000000000
Q ss_pred -HHHHHHH--HHHHhhhhhhhccC-CCCCHHHH---hhhccHHHHHHHHhhhccchhcHHHHHhhcCcchhcCc--CCcc
Q 000293 344 -KLANGLI--DILRSNKELFKGRA-KGFDVEKA---LSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGN--IKIP 414 (1712)
Q Consensus 344 -~La~~Lk--~~L~~~~~lf~~~~-~~~Die~I---lkaktlrEFDd~~t~~~~Gf~sv~eYYr~aS~~~~L~k--IkVP 414 (1712)
.....+. ..+. ..++.... ...+.... ............+......+....++... ....+.. +++|
T Consensus 154 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P 229 (286)
T PRK03204 154 PPVQYAILRRNFFV--ERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLAR--LAREVPATLGTKP 229 (286)
T ss_pred ccchhhhhhhhHHH--HHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHH--hhhhhhhhcCCCC
Confidence 0000000 0000 00111000 00110000 00000000000000000000000000000 0011111 3899
Q ss_pred EEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHH
Q 000293 415 VLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWL 472 (1712)
Q Consensus 415 tLII~G-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL 472 (1712)
+|+|+| +|.++|+........+..|+.++++++++||....+ .+. .+.+.+.+||
T Consensus 230 tliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e--~Pe-~~~~~i~~~~ 285 (286)
T PRK03204 230 TLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQED--APD-RIAAAIIERF 285 (286)
T ss_pred eEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCccccccc--CHH-HHHHHHHHhc
Confidence 999999 888887654444456789999999999999987776 233 4678888886
No 28
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.71 E-value=3.1e-16 Score=176.13 Aligned_cols=232 Identities=13% Similarity=0.103 Sum_probs=129.7
Q ss_pred cEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEEEEe
Q 000293 217 TTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGW 296 (1712)
Q Consensus 217 PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spLvLVGh 296 (1712)
|+|||+||++ ++. .+|+.++..|. ..|+|+++|+||||.|... ..+ ..+|+...+.. . ...++++|||
T Consensus 14 ~~ivllHG~~-~~~-~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~--~~~---~~~~~~~~l~~---~-~~~~~~lvGh 81 (256)
T PRK10349 14 VHLVLLHGWG-LNA-EVWRCIDEELS-SHFTLHLVDLPGFGRSRGF--GAL---SLADMAEAVLQ---Q-APDKAIWLGW 81 (256)
T ss_pred CeEEEECCCC-CCh-hHHHHHHHHHh-cCCEEEEecCCCCCCCCCC--CCC---CHHHHHHHHHh---c-CCCCeEEEEE
Confidence 5799999974 343 34667777765 4599999999999999632 222 23333333322 2 2368999999
Q ss_pred cHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCch-h-hH---hHHHHHHHHHHHHHhhhhhhhccCCCCCHHH
Q 000293 297 GYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPH-H-IA---LDEKLANGLIDILRSNKELFKGRAKGFDVEK 371 (1712)
Q Consensus 297 SMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~-~-~l---y~~~La~~Lk~~L~~~~~lf~~~~~~~Die~ 371 (1712)
||||.+++.++.++++ .+.++++++++....... .++. . .. +...+.......+........ . ......
T Consensus 82 S~Gg~ia~~~a~~~p~--~v~~lili~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~- 155 (256)
T PRK10349 82 SLGGLVASQIALTHPE--RVQALVTVASSPCFSARD-EWPGIKPDVLAGFQQQLSDDFQRTVERFLALQT-M-GTETAR- 155 (256)
T ss_pred CHHHHHHHHHHHhChH--hhheEEEecCccceecCC-CCCcccHHHHHHHHHHHHhchHHHHHHHHHHHH-c-cCchHH-
Confidence 9999999999988765 689999886542221110 0110 0 00 000010001111111000000 0 000000
Q ss_pred HhhhccHHHHHHHHhh-hccch---hcHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEe
Q 000293 372 ALSAKSVRDFEKAISM-VSYGF---EAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLC 446 (1712)
Q Consensus 372 IlkaktlrEFDd~~t~-~~~Gf---~sv~eYYr~aS~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~nPnv~LvLt 446 (1712)
...+++...+.. +.... ....+++...+....+.+|++|+|+|+| +|.++|.... ....+..|+++++++
T Consensus 156 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~-~~~~~~i~~~~~~~i 230 (256)
T PRK10349 156 ----QDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVV-PMLDKLWPHSESYIF 230 (256)
T ss_pred ----HHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHH-HHHHHhCCCCeEEEe
Confidence 001111111111 00001 1112233444556678999999999999 8988887543 344567899999999
Q ss_pred cCCCccccCCCCchhHHHHHHHHHHHHH
Q 000293 447 SCLPSSVIGGGRAAESWCQNLVIEWLSA 474 (1712)
Q Consensus 447 ~gGHH~gF~e~~~~~sWv~r~VlEFL~a 474 (1712)
+++||..+.+ . ...+.+.+.+|-++
T Consensus 231 ~~~gH~~~~e--~-p~~f~~~l~~~~~~ 255 (256)
T PRK10349 231 AKAAHAPFIS--H-PAEFCHLLVALKQR 255 (256)
T ss_pred CCCCCCcccc--C-HHHHHHHHHHHhcc
Confidence 9988877775 2 34577888877543
No 29
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.69 E-value=1.9e-15 Score=180.42 Aligned_cols=239 Identities=13% Similarity=0.166 Sum_probs=133.6
Q ss_pred CCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCccc-CcHHHHHHHHHHHHhhCCCCcEEE
Q 000293 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTA-ADSDDICTAIQFIGKARPWTTLMS 293 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a-~~tdDL~aVLd~I~kryP~spLvL 293 (1712)
.+|+|||+||+++ +.. .|+.++..|. .+|+|+++|+||||.|.......|.. .+.+|+.++++.+ ...++++
T Consensus 87 ~gp~lvllHG~~~-~~~-~w~~~~~~L~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l----~~~~~~l 159 (360)
T PLN02679 87 SGPPVLLVHGFGA-SIP-HWRRNIGVLA-KNYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV----VQKPTVL 159 (360)
T ss_pred CCCeEEEECCCCC-CHH-HHHHHHHHHh-cCCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh----cCCCeEE
Confidence 3589999999853 433 3566676665 48999999999999996543223332 3456666666654 3368999
Q ss_pred EEecHHHHHHHHHHHH-cCCCCCccEEEEecCCCChhhhh--cc------CchhhHhHHH-----HHHHHHH------HH
Q 000293 294 VGWGYGANMLTKYLAE-VGERTPLTAVTCIDNPFDLEEAT--RS------SPHHIALDEK-----LANGLID------IL 353 (1712)
Q Consensus 294 VGhSMGG~IaL~YLge-~ge~s~V~AaVlIS~P~Dl~e~~--~s------l~~~~ly~~~-----La~~Lk~------~L 353 (1712)
|||||||.+++.++.. +++ +|.++|+++++....... .. .+..+.+... +...+.. .+
T Consensus 160 vGhS~Gg~ia~~~a~~~~P~--rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (360)
T PLN02679 160 IGNSVGSLACVIAASESTRD--LVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNL 237 (360)
T ss_pred EEECHHHHHHHHHHHhcChh--hcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHH
Confidence 9999999999888875 444 699999998653221000 00 0000001000 0000000 00
Q ss_pred Hhh-hhhhhccCCCCCHHHHhhhccHHHHHHHHhhhcc---chhcHHHHHhh---cCcchhcCcCCccEEEEEe-CCCCC
Q 000293 354 RSN-KELFKGRAKGFDVEKALSAKSVRDFEKAISMVSY---GFEAIEDFYSK---SSTRSVVGNIKIPVLFIQN-DAGAV 425 (1712)
Q Consensus 354 ~~~-~~lf~~~~~~~Die~IlkaktlrEFDd~~t~~~~---Gf~sv~eYYr~---aS~~~~L~kIkVPtLII~G-DDp~V 425 (1712)
+.. ...+... ..++. ++-+.+..+.. .......++.. ......+.+|++|+|+|+| +|+++
T Consensus 238 ~~~~~~~~~~~-~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~ 306 (360)
T PLN02679 238 KNILLSVYGNK-EAVDD----------ELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFT 306 (360)
T ss_pred HHHHHHhccCc-ccCCH----------HHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCc
Confidence 000 0001000 00110 00011100000 01111111111 1223567899999999999 89999
Q ss_pred CCCCh----HHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHHH
Q 000293 426 PPFSI----PRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVE 476 (1712)
Q Consensus 426 P~~ai----p~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~ 476 (1712)
|+... ...+.+..|++++.+++++||..+.+ .++ .+.+.+.+||+.+.
T Consensus 307 p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E--~Pe-~~~~~I~~FL~~~~ 358 (360)
T PLN02679 307 PLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDD--RPD-LVHEKLLPWLAQLP 358 (360)
T ss_pred CchhhHHHHHHhhhccCCceEEEEcCCCCCCcccc--CHH-HHHHHHHHHHHhcC
Confidence 87531 12234567999999999988877765 334 57889999998643
No 30
>PLN02578 hydrolase
Probab=99.69 E-value=2.2e-15 Score=179.21 Aligned_cols=243 Identities=16% Similarity=0.174 Sum_probs=131.2
Q ss_pred CCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCccc-CcHHHHHHHHHHHHhhCCCCcEEE
Q 000293 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTA-ADSDDICTAIQFIGKARPWTTLMS 293 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a-~~tdDL~aVLd~I~kryP~spLvL 293 (1712)
.+++|||+||+++ +. ..|+.++..+. .+|+|+++|+||||.|...... |.. .+.+|+.++++.+. ..++++
T Consensus 85 ~g~~vvliHG~~~-~~-~~w~~~~~~l~-~~~~v~~~D~~G~G~S~~~~~~-~~~~~~a~~l~~~i~~~~----~~~~~l 156 (354)
T PLN02578 85 EGLPIVLIHGFGA-SA-FHWRYNIPELA-KKYKVYALDLLGFGWSDKALIE-YDAMVWRDQVADFVKEVV----KEPAVL 156 (354)
T ss_pred CCCeEEEECCCCC-CH-HHHHHHHHHHh-cCCEEEEECCCCCCCCCCcccc-cCHHHHHHHHHHHHHHhc----cCCeEE
Confidence 3578999999843 43 34555666654 5799999999999999754322 322 23467777766654 368999
Q ss_pred EEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCc-----hhhHhHHHHHHHHHHHHHhhhh--h-hhccCC
Q 000293 294 VGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSP-----HHIALDEKLANGLIDILRSNKE--L-FKGRAK 365 (1712)
Q Consensus 294 VGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~-----~~~ly~~~La~~Lk~~L~~~~~--l-f~~~~~ 365 (1712)
+||||||.+++.++.++++ .++++++++++........... ....+...+...+...+.+... . +....
T Consensus 157 vG~S~Gg~ia~~~A~~~p~--~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 233 (354)
T PLN02578 157 VGNSLGGFTALSTAVGYPE--LVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQAKQ- 233 (354)
T ss_pred EEECHHHHHHHHHHHhChH--hcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhcC-
Confidence 9999999999999999876 6889988875432211100000 0000111011111100000000 0 00000
Q ss_pred CCCHHHHhh-----hccHHHH-HHHHhhhccchhcHHHHHh----------hcCcchhcCcCCccEEEEEe-CCCCCCCC
Q 000293 366 GFDVEKALS-----AKSVRDF-EKAISMVSYGFEAIEDFYS----------KSSTRSVVGNIKIPVLFIQN-DAGAVPPF 428 (1712)
Q Consensus 366 ~~Die~Ilk-----aktlrEF-Dd~~t~~~~Gf~sv~eYYr----------~aS~~~~L~kIkVPtLII~G-DDp~VP~~ 428 (1712)
......... ...+.++ .+.+..+.........||+ .....+.+++|++|+|+|+| +|+++|..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~ 313 (354)
T PLN02578 234 PSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPA 313 (354)
T ss_pred HHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHH
Confidence 000000000 0000010 0111111111111111111 11233567899999999999 89888876
Q ss_pred ChHHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHH
Q 000293 429 SIPRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLS 473 (1712)
Q Consensus 429 aip~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~ 473 (1712)
... ...+..|+.++++++ +||+.+.+ . ...+.+.+.+|++
T Consensus 314 ~~~-~l~~~~p~a~l~~i~-~GH~~~~e--~-p~~~~~~I~~fl~ 353 (354)
T PLN02578 314 KAE-KIKAFYPDTTLVNLQ-AGHCPHDE--V-PEQVNKALLEWLS 353 (354)
T ss_pred HHH-HHHHhCCCCEEEEeC-CCCCcccc--C-HHHHHHHHHHHHh
Confidence 443 345668999988885 67776665 2 3457889999985
No 31
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.69 E-value=4.3e-16 Score=171.35 Aligned_cols=225 Identities=16% Similarity=0.187 Sum_probs=149.2
Q ss_pred CcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEEEE
Q 000293 216 DTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVG 295 (1712)
Q Consensus 216 ~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spLvLVG 295 (1712)
+..||||||++|.+.+ ++.|+++|.++||.|.++++||||-.+..--......|.+|+....+++.+. ....|.++|
T Consensus 15 ~~AVLllHGFTGt~~D--vr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~-gy~eI~v~G 91 (243)
T COG1647 15 NRAVLLLHGFTGTPRD--VRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA-GYDEIAVVG 91 (243)
T ss_pred CEEEEEEeccCCCcHH--HHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc-CCCeEEEEe
Confidence 3689999999875543 7899999999999999999999998752111122234678999999999843 346899999
Q ss_pred ecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhHhHHHHHHHHHHHHHhhhhhhhccCCCCCHHHHhhh
Q 000293 296 WGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSA 375 (1712)
Q Consensus 296 hSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~~La~~Lk~~L~~~~~lf~~~~~~~Die~Ilka 375 (1712)
.||||.++++.+..++ ++++|.+|+|........ +..++..+.++... +. ..|.+.+ .
T Consensus 92 lSmGGv~alkla~~~p----~K~iv~m~a~~~~k~~~~-----------iie~~l~y~~~~kk-~e----~k~~e~~--~ 149 (243)
T COG1647 92 LSMGGVFALKLAYHYP----PKKIVPMCAPVNVKSWRI-----------IIEGLLEYFRNAKK-YE----GKDQEQI--D 149 (243)
T ss_pred ecchhHHHHHHHhhCC----ccceeeecCCcccccchh-----------hhHHHHHHHHHhhh-cc----CCCHHHH--H
Confidence 9999999999988764 789999999987653221 12223333322211 11 1122222 1
Q ss_pred ccHHHHHHHHhhhccchhcHHHHHhhc-CcchhcCcCCccEEEEEe-CCCCCCCCChHHHH-HhcCCCeEEEEecCCCcc
Q 000293 376 KSVRDFEKAISMVSYGFEAIEDFYSKS-STRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSS-IAENPFTSLLLCSCLPSS 452 (1712)
Q Consensus 376 ktlrEFDd~~t~~~~Gf~sv~eYYr~a-S~~~~L~kIkVPtLII~G-DDp~VP~~aip~~l-a~~nPnv~LvLt~gGHH~ 452 (1712)
+.++.|++..... ..++|.-. ...+.+..|.+|+++++| .|++||.++...-. .......++.++++.||.
T Consensus 150 ~e~~~~~~~~~~~------~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHV 223 (243)
T COG1647 150 KEMKSYKDTPMTT------TAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHV 223 (243)
T ss_pred HHHHHhhcchHHH------HHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCce
Confidence 2233333322221 22222221 235678999999999999 99999987654322 223445689999999996
Q ss_pred ccCCCCchhHHHHHHHHHHHH
Q 000293 453 VIGGGRAAESWCQNLVIEWLS 473 (1712)
Q Consensus 453 gF~e~~~~~sWv~r~VlEFL~ 473 (1712)
--.+ ....-+.+.|.+||+
T Consensus 224 It~D--~Erd~v~e~V~~FL~ 242 (243)
T COG1647 224 ITLD--KERDQVEEDVITFLE 242 (243)
T ss_pred eecc--hhHHHHHHHHHHHhh
Confidence 6654 234457899999986
No 32
>PLN02965 Probable pheophorbidase
Probab=99.69 E-value=9.4e-16 Score=173.09 Aligned_cols=236 Identities=11% Similarity=0.107 Sum_probs=133.7
Q ss_pred EEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcc-cCcHHHHHHHHHHHHhhCCCCcEEEEEe
Q 000293 218 TLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFT-AADSDDICTAIQFIGKARPWTTLMSVGW 296 (1712)
Q Consensus 218 tVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~-a~~tdDL~aVLd~I~kryP~spLvLVGh 296 (1712)
.|||+||++. +. ..|+.++..|.+.||+|+++|+||||.|.......|. ....+|+.++++.+.. ..++++|||
T Consensus 5 ~vvllHG~~~-~~-~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~---~~~~~lvGh 79 (255)
T PLN02965 5 HFVFVHGASH-GA-WCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPP---DHKVILVGH 79 (255)
T ss_pred EEEEECCCCC-Cc-CcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCC---CCCEEEEec
Confidence 4999999843 33 3466778888889999999999999999644332333 2345777777776531 148999999
Q ss_pred cHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhHhHHHHHHHHHHHHHhhhhhhhccC-CCC-----CHH
Q 000293 297 GYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRA-KGF-----DVE 370 (1712)
Q Consensus 297 SMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~~La~~Lk~~L~~~~~lf~~~~-~~~-----Die 370 (1712)
||||.+++.|+.++++ +|.++|++++........ . .... .... ..... +. ...+.... ... ...
T Consensus 80 SmGG~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~-~--~~~~-~~~~-~~~~~-~~--~~~~~~~~~~~~~~~~~~~~ 149 (255)
T PLN02965 80 SIGGGSVTEALCKFTD--KISMAIYVAAAMVKPGSI-I--SPRL-KNVM-EGTEK-IW--DYTFGEGPDKPPTGIMMKPE 149 (255)
T ss_pred CcchHHHHHHHHhCch--heeEEEEEccccCCCCCC-c--cHHH-Hhhh-hcccc-ce--eeeeccCCCCCcchhhcCHH
Confidence 9999999999998875 688888887642110000 0 0000 0000 00000 00 00000000 000 000
Q ss_pred HH----hhhccHHHHHH--HHhhhccchhcHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEE
Q 000293 371 KA----LSAKSVRDFEK--AISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSL 443 (1712)
Q Consensus 371 ~I----lkaktlrEFDd--~~t~~~~Gf~sv~eYYr~aS~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~nPnv~L 443 (1712)
.. .......+... .... ...+.....+ . .....+..|++|+|+|+| +|.++|+.. ...+.+..|++++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~--~~~~~~~~i~vP~lvi~g~~D~~~~~~~-~~~~~~~~~~a~~ 224 (255)
T PLN02965 150 FVRHYYYNQSPLEDYTLSSKLLR-PAPVRAFQDL-D--KLPPNPEAEKVPRVYIKTAKDNLFDPVR-QDVMVENWPPAQT 224 (255)
T ss_pred HHHHHHhcCCCHHHHHHHHHhcC-CCCCcchhhh-h--hccchhhcCCCCEEEEEcCCCCCCCHHH-HHHHHHhCCcceE
Confidence 00 00000000000 0000 0001111111 0 112245679999999999 999998753 3455678999999
Q ss_pred EEecCCCccccCCCCchhHHHHHHHHHHHHHHH
Q 000293 444 LLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVE 476 (1712)
Q Consensus 444 vLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~ 476 (1712)
++++++||+.+.+. +. -+.+.+.+|++.+.
T Consensus 225 ~~i~~~GH~~~~e~--p~-~v~~~l~~~~~~~~ 254 (255)
T PLN02965 225 YVLEDSDHSAFFSV--PT-TLFQYLLQAVSSLQ 254 (255)
T ss_pred EEecCCCCchhhcC--HH-HHHHHHHHHHHHhc
Confidence 99999999888863 34 46788888887653
No 33
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.68 E-value=1.3e-15 Score=169.54 Aligned_cols=232 Identities=13% Similarity=0.164 Sum_probs=133.3
Q ss_pred CCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEE
Q 000293 214 GLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMS 293 (1712)
Q Consensus 214 ~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spLvL 293 (1712)
..+|+||++||+++ +... +..++..+ ..+|+|+++|+||||.|.... ........+|+.++++++. ..++++
T Consensus 14 ~~~~~iv~lhG~~~-~~~~-~~~~~~~l-~~~~~vi~~D~~G~G~s~~~~-~~~~~~~~~d~~~~l~~l~----~~~~~l 85 (255)
T PRK10673 14 HNNSPIVLVHGLFG-SLDN-LGVLARDL-VNDHDIIQVDMRNHGLSPRDP-VMNYPAMAQDLLDTLDALQ----IEKATF 85 (255)
T ss_pred CCCCCEEEECCCCC-chhH-HHHHHHHH-hhCCeEEEECCCCCCCCCCCC-CCCHHHHHHHHHHHHHHcC----CCceEE
Confidence 35789999999854 4433 45566665 457999999999999996432 2222334678888888763 357999
Q ss_pred EEecHHHHHHHHHHHHcCCCCCccEEEEecC-CCChhhhhccCchhhHhHHHHHHHHHH-HHHh---hhhhhhccCCCCC
Q 000293 294 VGWGYGANMLTKYLAEVGERTPLTAVTCIDN-PFDLEEATRSSPHHIALDEKLANGLID-ILRS---NKELFKGRAKGFD 368 (1712)
Q Consensus 294 VGhSMGG~IaL~YLge~ge~s~V~AaVlIS~-P~Dl~e~~~sl~~~~ly~~~La~~Lk~-~L~~---~~~lf~~~~~~~D 368 (1712)
+||||||.+++.++..+++ +|+++++++. |...... . ....+. .+. .+.. .... ....+... +.
T Consensus 86 vGhS~Gg~va~~~a~~~~~--~v~~lvli~~~~~~~~~~--~--~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~---~~ 154 (255)
T PRK10673 86 IGHSMGGKAVMALTALAPD--RIDKLVAIDIAPVDYHVR--R--HDEIFA-AIN-AVSEAGATTRQQAAAIMRQH---LN 154 (255)
T ss_pred EEECHHHHHHHHHHHhCHh--hcceEEEEecCCCCccch--h--hHHHHH-HHH-HhhhcccccHHHHHHHHHHh---cC
Confidence 9999999999999988765 6889888853 2221100 0 000000 000 0000 0000 00000000 00
Q ss_pred HHHHhhhccHHHHHH-HHhhhc--cchhcHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEE
Q 000293 369 VEKALSAKSVRDFEK-AISMVS--YGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLL 444 (1712)
Q Consensus 369 ie~IlkaktlrEFDd-~~t~~~--~Gf~sv~eYYr~aS~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~nPnv~Lv 444 (1712)
...+..+.. .+.... ++.....+.|........+..+++|+|+|+| +|++++..... ...+..|+++++
T Consensus 155 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~-~~~~~~~~~~~~ 227 (255)
T PRK10673 155 ------EEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRD-DLLAQFPQARAH 227 (255)
T ss_pred ------CHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHH-HHHHhCCCcEEE
Confidence 000011100 000000 0111111223333334457789999999999 89988865433 445678999999
Q ss_pred EecCCCccccCCCCchhHHHHHHHHHHHHH
Q 000293 445 LCSCLPSSVIGGGRAAESWCQNLVIEWLSA 474 (1712)
Q Consensus 445 Lt~gGHH~gF~e~~~~~sWv~r~VlEFL~a 474 (1712)
++++++|..+.+. ...+.+.+.+||..
T Consensus 228 ~~~~~gH~~~~~~---p~~~~~~l~~fl~~ 254 (255)
T PRK10673 228 VIAGAGHWVHAEK---PDAVLRAIRRYLND 254 (255)
T ss_pred EeCCCCCeeeccC---HHHHHHHHHHHHhc
Confidence 9998888666542 34578889999863
No 34
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.67 E-value=2.3e-15 Score=175.06 Aligned_cols=126 Identities=13% Similarity=0.152 Sum_probs=84.7
Q ss_pred EEEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCC
Q 000293 187 QRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRL 266 (1712)
Q Consensus 187 rRe~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprl 266 (1712)
....+...||..+.+.-..+ ..+++|||+||+.++.... .+...+...+|+|+++|+||||.|.....
T Consensus 5 ~~~~~~~~~~~~l~y~~~g~-------~~~~~lvllHG~~~~~~~~---~~~~~~~~~~~~vi~~D~~G~G~S~~~~~-- 72 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSGN-------PDGKPVVFLHGGPGSGTDP---GCRRFFDPETYRIVLFDQRGCGKSTPHAC-- 72 (306)
T ss_pred cCCeEEcCCCcEEEEEECcC-------CCCCEEEEECCCCCCCCCH---HHHhccCccCCEEEEECCCCCCCCCCCCC--
Confidence 34577888998887643221 1246899999975533221 22333445789999999999999974321
Q ss_pred cccCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCC
Q 000293 267 FTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPF 326 (1712)
Q Consensus 267 y~a~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~ 326 (1712)
+.....+|+.+.+..+.+..+..+++++||||||++++.|+..+++ .+.++|++++..
T Consensus 73 ~~~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~--~v~~lvl~~~~~ 130 (306)
T TIGR01249 73 LEENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPE--VVTGLVLRGIFL 130 (306)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChH--hhhhheeecccc
Confidence 1112234454444544444455689999999999999999999875 578888886543
No 35
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.67 E-value=4.5e-15 Score=183.18 Aligned_cols=133 Identities=11% Similarity=0.129 Sum_probs=85.5
Q ss_pred cceEEEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHH---hCCcEEEEEcCCCCCCCC
Q 000293 184 LEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEAL---RRGFFPVVMNPRGCGGSP 260 (1712)
Q Consensus 184 v~YrRe~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Ll---q~GYrVVVfD~RGhGgS~ 260 (1712)
..+...++++++ ..+.+.-..+. ....+|+|||+||+.+ +...|...++..+. +.+|+|+++|+||||.|+
T Consensus 174 ~~~~~~~~~~~~-~~l~~~~~gp~----~~~~k~~VVLlHG~~~-s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~ 247 (481)
T PLN03087 174 CKFCTSWLSSSN-ESLFVHVQQPK----DNKAKEDVLFIHGFIS-SSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSP 247 (481)
T ss_pred cceeeeeEeeCC-eEEEEEEecCC----CCCCCCeEEEECCCCc-cHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCc
Confidence 334445555544 56665432221 1123579999999853 44333222334433 479999999999999997
Q ss_pred CCCCCCcccC-cHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCC
Q 000293 261 LTTSRLFTAA-DSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFD 327 (1712)
Q Consensus 261 ltsprly~a~-~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~D 327 (1712)
......|... ..+|+. ..+.+..+..+++++||||||.+++.++..+++ .+.++++++++..
T Consensus 248 ~p~~~~ytl~~~a~~l~---~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe--~V~~LVLi~~~~~ 310 (481)
T PLN03087 248 KPADSLYTLREHLEMIE---RSVLERYKVKSFHIVAHSLGCILALALAVKHPG--AVKSLTLLAPPYY 310 (481)
T ss_pred CCCCCcCCHHHHHHHHH---HHHHHHcCCCCEEEEEECHHHHHHHHHHHhChH--hccEEEEECCCcc
Confidence 5433334322 234442 223333456789999999999999999999876 6899999987654
No 36
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.67 E-value=1.2e-15 Score=168.91 Aligned_cols=228 Identities=12% Similarity=0.097 Sum_probs=124.1
Q ss_pred CcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEEEE
Q 000293 216 DTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVG 295 (1712)
Q Consensus 216 ~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spLvLVG 295 (1712)
+|+|||+||+++ +... |+.++..+ .+|+|+++|+||||.|...... ......+|+.++++++ +..+++++|
T Consensus 2 ~p~vvllHG~~~-~~~~-w~~~~~~l--~~~~vi~~D~~G~G~S~~~~~~-~~~~~~~~l~~~l~~~----~~~~~~lvG 72 (242)
T PRK11126 2 LPWLVFLHGLLG-SGQD-WQPVGEAL--PDYPRLYIDLPGHGGSAAISVD-GFADVSRLLSQTLQSY----NILPYWLVG 72 (242)
T ss_pred CCEEEEECCCCC-ChHH-HHHHHHHc--CCCCEEEecCCCCCCCCCcccc-CHHHHHHHHHHHHHHc----CCCCeEEEE
Confidence 478999999854 4443 46677766 4799999999999999643321 1112345666666543 457899999
Q ss_pred ecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhc---cCchhhHhHHHHHH-HHHHHHHhhhhhhhcc-CCCCCHH
Q 000293 296 WGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATR---SSPHHIALDEKLAN-GLIDILRSNKELFKGR-AKGFDVE 370 (1712)
Q Consensus 296 hSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~---sl~~~~ly~~~La~-~Lk~~L~~~~~lf~~~-~~~~Die 370 (1712)
|||||.+++.+++++++. .++++++++++........ .+.....+...+.. .+...+.. .+... ...+...
T Consensus 73 ~S~Gg~va~~~a~~~~~~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 148 (242)
T PRK11126 73 YSLGGRIAMYYACQGLAG-GLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLAD---WYQQPVFASLNAE 148 (242)
T ss_pred ECHHHHHHHHHHHhCCcc-cccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHH---HHhcchhhccCcc
Confidence 999999999999987542 4888888876543321110 00000000000000 00011110 00000 0000000
Q ss_pred HHhhhccHHHHHHHHhhhccchhcHHHHHhh------cCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEE
Q 000293 371 KALSAKSVRDFEKAISMVSYGFEAIEDFYSK------SSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSL 443 (1712)
Q Consensus 371 ~IlkaktlrEFDd~~t~~~~Gf~sv~eYYr~------aS~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~nPnv~L 443 (1712)
....+..... ...++ ....++.. ......+.+|++|+|+|+| +|+.+. ..+. .+++++
T Consensus 149 ------~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~------~~~~-~~~~~~ 213 (242)
T PRK11126 149 ------QRQQLVAKRS-NNNGA-AVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ------ALAQ-QLALPL 213 (242)
T ss_pred ------HHHHHHHhcc-cCCHH-HHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH------HHHH-HhcCeE
Confidence 0000000000 00011 11222221 1223567899999999999 777442 1122 247899
Q ss_pred EEecCCCccccCCCCchhHHHHHHHHHHHHH
Q 000293 444 LLCSCLPSSVIGGGRAAESWCQNLVIEWLSA 474 (1712)
Q Consensus 444 vLt~gGHH~gF~e~~~~~sWv~r~VlEFL~a 474 (1712)
++++++||..+.+. ...+.+.|.+||..
T Consensus 214 ~~i~~~gH~~~~e~---p~~~~~~i~~fl~~ 241 (242)
T PRK11126 214 HVIPNAGHNAHREN---PAAFAASLAQILRL 241 (242)
T ss_pred EEeCCCCCchhhhC---hHHHHHHHHHHHhh
Confidence 99998888676652 34678889999863
No 37
>PLN02872 triacylglycerol lipase
Probab=99.66 E-value=8.1e-16 Score=186.09 Aligned_cols=291 Identities=16% Similarity=0.143 Sum_probs=163.9
Q ss_pred CCcceEEEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHH-----HHHHHHHHHhCCcEEEEEcCCCC
Q 000293 182 GKLEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKR-----IRLFVCEALRRGFFPVVMNPRGC 256 (1712)
Q Consensus 182 p~v~YrRe~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sY-----ir~La~~Llq~GYrVVVfD~RGh 256 (1712)
...+.++..++++||..+.++|..+.........+|+|+++||+.. +...| .+.++..|+++||+|+++|+||+
T Consensus 40 ~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~-ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~ 118 (395)
T PLN02872 40 AGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFM-AGDAWFLNSPEQSLGFILADHGFDVWVGNVRGT 118 (395)
T ss_pred cCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccc-cccceeecCcccchHHHHHhCCCCccccccccc
Confidence 3567789999999999999999753211111224689999999854 33333 24566778899999999999999
Q ss_pred CCCCC------CCCCCcccCc----HHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCC-CCccEEEEecCC
Q 000293 257 GGSPL------TTSRLFTAAD----SDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGER-TPLTAVTCIDNP 325 (1712)
Q Consensus 257 GgS~l------tsprly~a~~----tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~-s~V~AaVlIS~P 325 (1712)
+.|.. ..+.++...+ ..|+.++|+++.+..+ .++++|||||||.+++.++ .+++. ..+++++++++.
T Consensus 119 ~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~-~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~ 196 (395)
T PLN02872 119 RWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITN-SKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPI 196 (395)
T ss_pred ccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccC-CceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcch
Confidence 86521 1122222221 3699999999976544 6899999999999998655 33431 246666776655
Q ss_pred CChhhhhccCc----h---hhHh----------HHHHHHHHHHHH-----Hhhh--hhhhccCCCCCHHHH---h-----
Q 000293 326 FDLEEATRSSP----H---HIAL----------DEKLANGLIDIL-----RSNK--ELFKGRAKGFDVEKA---L----- 373 (1712)
Q Consensus 326 ~Dl~e~~~sl~----~---~~ly----------~~~La~~Lk~~L-----~~~~--~lf~~~~~~~Die~I---l----- 373 (1712)
..+......+. . ..++ ...+...+...+ .... ..+.+....++...+ .
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pa 276 (395)
T PLN02872 197 SYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEPH 276 (395)
T ss_pred hhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCCC
Confidence 43211100000 0 0000 000000010000 0000 001111111221111 0
Q ss_pred --hhccHHHHHHHHhhhc---cchh--cHHHHHhhcC-cchhcCcC--CccEEEEEe-CCCCCCCCChHHHHHhcCCC-e
Q 000293 374 --SAKSVRDFEKAISMVS---YGFE--AIEDFYSKSS-TRSVVGNI--KIPVLFIQN-DAGAVPPFSIPRSSIAENPF-T 441 (1712)
Q Consensus 374 --kaktlrEFDd~~t~~~---~Gf~--sv~eYYr~aS-~~~~L~kI--kVPtLII~G-DDp~VP~~aip~~la~~nPn-v 441 (1712)
+.+.+..|-+.+.... |-|. .-..+|.... +...+.+| ++|+++++| +|.++++..+... .+..|+ .
T Consensus 277 gtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l-~~~Lp~~~ 355 (395)
T PLN02872 277 PSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHT-LAELPSKP 355 (395)
T ss_pred cchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHH-HHHCCCcc
Confidence 1222333333332211 2221 1233454444 34458888 589999999 8999887655433 445565 6
Q ss_pred EEEEecCCCccccCCCCchhHHHHHHHHHHHHHHH
Q 000293 442 SLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVE 476 (1712)
Q Consensus 442 ~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~ 476 (1712)
.+..+++.+|..|.-..+....+.+.|.+||++..
T Consensus 356 ~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~ 390 (395)
T PLN02872 356 ELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLG 390 (395)
T ss_pred EEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhh
Confidence 77788988887664333445557899999998543
No 38
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.66 E-value=1e-14 Score=177.68 Aligned_cols=243 Identities=16% Similarity=0.140 Sum_probs=145.6
Q ss_pred cceEEEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q 000293 184 LEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTT 263 (1712)
Q Consensus 184 v~YrRe~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~lts 263 (1712)
..+++..|...||..+...++.+. .....|+||++||+ ++....++..++..++++||+|+++|+||||.|....
T Consensus 166 ~~~e~v~i~~~~g~~l~g~l~~P~----~~~~~P~Vli~gG~-~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~ 240 (414)
T PRK05077 166 GELKELEFPIPGGGPITGFLHLPK----GDGPFPTVLVCGGL-DSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWK 240 (414)
T ss_pred CceEEEEEEcCCCcEEEEEEEECC----CCCCccEEEEeCCc-ccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC
Confidence 346777788888877765544332 12345777777775 4333455667888999999999999999999985321
Q ss_pred CCCcccCcHHHHHHHHHHHHhhC--CCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhHh
Q 000293 264 SRLFTAADSDDICTAIQFIGKAR--PWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIAL 341 (1712)
Q Consensus 264 prly~a~~tdDL~aVLd~I~kry--P~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly 341 (1712)
..........++++++.... ...+++++||||||+++++++..+++ +++++|+++++++........ +
T Consensus 241 ---~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~--ri~a~V~~~~~~~~~~~~~~~-----~ 310 (414)
T PRK05077 241 ---LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPP--RLKAVACLGPVVHTLLTDPKR-----Q 310 (414)
T ss_pred ---ccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCc--CceEEEEECCccchhhcchhh-----h
Confidence 11112233457888887652 34689999999999999999987654 699999999887532111000 0
Q ss_pred HHHHHHHHHHHHHhhhhhhhccCCCCCHHHHhhhccHHHHHHHHhhhccchhcHHHHHhhcCcchhc-CcCCccEEEEEe
Q 000293 342 DEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVV-GNIKIPVLFIQN 420 (1712)
Q Consensus 342 ~~~La~~Lk~~L~~~~~lf~~~~~~~Die~IlkaktlrEFDd~~t~~~~Gf~sv~eYYr~aS~~~~L-~kIkVPtLII~G 420 (1712)
.. +.....+.+... +. ....+.+. +...+. .+... ....+ .+|++|+|+|+|
T Consensus 311 ~~-~p~~~~~~la~~---lg--~~~~~~~~---------l~~~l~--~~sl~----------~~~~l~~~i~~PvLiI~G 363 (414)
T PRK05077 311 QQ-VPEMYLDVLASR---LG--MHDASDEA---------LRVELN--RYSLK----------VQGLLGRRCPTPMLSGYW 363 (414)
T ss_pred hh-chHHHHHHHHHH---hC--CCCCChHH---------HHHHhh--hccch----------hhhhhccCCCCcEEEEec
Confidence 00 000001111100 00 00011111 100000 00000 00112 579999999999
Q ss_pred -CCCCCCCCChHHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHH
Q 000293 421 -DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAV 475 (1712)
Q Consensus 421 -DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av 475 (1712)
+|+++|+.... .+....|+.+++++++.+| +.. ...+...+.+||...
T Consensus 364 ~~D~ivP~~~a~-~l~~~~~~~~l~~i~~~~~--~e~----~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 364 KNDPFSPEEDSR-LIASSSADGKLLEIPFKPV--YRN----FDKALQEISDWLEDR 412 (414)
T ss_pred CCCCCCCHHHHH-HHHHhCCCCeEEEccCCCc--cCC----HHHHHHHHHHHHHHH
Confidence 99999987554 3356688999999998643 222 234678899999754
No 39
>PRK07581 hypothetical protein; Validated
Probab=99.66 E-value=4.1e-15 Score=174.97 Aligned_cols=251 Identities=12% Similarity=0.093 Sum_probs=131.3
Q ss_pred CcEEEEeCCCCCCChhHHHHHHH---HHHHhCCcEEEEEcCCCCCCCCCCCC--CCcccC------cHHHHHHHHHHHHh
Q 000293 216 DTTLLLVPGTAEGSIEKRIRLFV---CEALRRGFFPVVMNPRGCGGSPLTTS--RLFTAA------DSDDICTAIQFIGK 284 (1712)
Q Consensus 216 ~PtVVLLHGltGGS~~sYir~La---~~Llq~GYrVVVfD~RGhGgS~ltsp--rly~a~------~tdDL~aVLd~I~k 284 (1712)
+|+||++||++ ++... +..++ ..+...+|+|+++|+||||.|..... ..|... ..+|+.+....+.+
T Consensus 41 ~~~vll~~~~~-~~~~~-~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 118 (339)
T PRK07581 41 DNAILYPTWYS-GTHQD-NEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTE 118 (339)
T ss_pred CCEEEEeCCCC-CCccc-chhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHH
Confidence 46677777764 34333 22222 24556789999999999999964321 123322 24777764444544
Q ss_pred hCCCCc-EEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhcc------------Cchh-hHh---HHHHHH
Q 000293 285 ARPWTT-LMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRS------------SPHH-IAL---DEKLAN 347 (1712)
Q Consensus 285 ryP~sp-LvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~s------------l~~~-~ly---~~~La~ 347 (1712)
.....+ .++|||||||++++.++.++++ +|.++|++++.......... ..+. ..+ ......
T Consensus 119 ~lgi~~~~~lvG~S~GG~va~~~a~~~P~--~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 196 (339)
T PRK07581 119 KFGIERLALVVGWSMGAQQTYHWAVRYPD--MVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFNGGWYAEPPERGLR 196 (339)
T ss_pred HhCCCceEEEEEeCHHHHHHHHHHHHCHH--HHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHH
Confidence 445567 4799999999999999999986 68999988765432110000 0000 000 000000
Q ss_pred HHHHHHHh---hhhhhhcc-CCCCCHHHHhhhccHHH-HHHHHh-hhccchhcHHH-HHh-----h----cCcchhcCcC
Q 000293 348 GLIDILRS---NKELFKGR-AKGFDVEKALSAKSVRD-FEKAIS-MVSYGFEAIED-FYS-----K----SSTRSVVGNI 411 (1712)
Q Consensus 348 ~Lk~~L~~---~~~lf~~~-~~~~Die~IlkaktlrE-FDd~~t-~~~~Gf~sv~e-YYr-----~----aS~~~~L~kI 411 (1712)
.+.+.... ....+... ......... ...+.. +...+. ....++..... +++ . ......+.+|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I 274 (339)
T PRK07581 197 AHARVYAGWGFSQAFYRQELWRAMGYASL--EDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSI 274 (339)
T ss_pred HHHHHHHHHHhHHHHHHhhhccccChhhH--HHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcC
Confidence 00000000 00000000 000000000 000000 000000 00111211111 111 1 1234568899
Q ss_pred CccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecC-CCccccCCCCchhHHHHHHHHHHHHHHH
Q 000293 412 KIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSC-LPSSVIGGGRAAESWCQNLVIEWLSAVE 476 (1712)
Q Consensus 412 kVPtLII~G-DDp~VP~~aip~~la~~nPnv~LvLt~g-GHH~gF~e~~~~~sWv~r~VlEFL~av~ 476 (1712)
++|||+|+| +|.++|+.... ...+..|+++++++++ +||..+.+. ...+.+.|.+||+++-
T Consensus 275 ~~PtLvI~G~~D~~~p~~~~~-~l~~~ip~a~l~~i~~~~GH~~~~~~---~~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 275 TAKTFVMPISTDLYFPPEDCE-AEAALIPNAELRPIESIWGHLAGFGQ---NPADIAFIDAALKELL 337 (339)
T ss_pred CCCEEEEEeCCCCCCCHHHHH-HHHHhCCCCeEEEeCCCCCccccccC---cHHHHHHHHHHHHHHH
Confidence 999999999 89888876543 4456789999999997 777666652 3346788888888753
No 40
>TIGR03008 pepcterm_CAAX CAAX prenyl protease-related protein. The CAAX prenyl protease, in eukaryotes, catalyzes three covalent modifications, including cleavage and acylation, at the C-terminus of certain proteins in a process connected to protein sorting. This family describes a bacterial protein family homologous to one domain of the CAAX-processing enzyme. Members of this protein family are found in genomes that carry a predicted protein sorting system, PEP-CTERM/exosortase, usually in the vicinity of the EpsH homolog that is the hallmark of the system. The function of this protein is unknown, but it may relate to protein motification.
Probab=99.63 E-value=1.3e-14 Score=162.78 Aligned_cols=134 Identities=19% Similarity=0.137 Sum_probs=95.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCccccchhhHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 000293 1510 VQNFLKGLIAGVMLVLLIQSLNAVLGCVSFSWPSIVTSSLTAMAWLKVY-GNISMLACQGIVTATVVVLVEELLFRSWLP 1588 (1712)
Q Consensus 1510 ~r~ll~GLllGvllillv~li~~llG~i~~~~~~~~~sa~~p~~~l~~~-~~~~~lil~~llvallvgi~EELLFRG~L~ 1588 (1712)
.+..+.|++.|++++++.+...++..... .... .++....... .....+++..+..++++|++||++|||+++
T Consensus 67 ~~~~l~gi~~Gv~~f~lwi~~~~~~~~~~-~~~~-----~~~~~i~~~~~~~~~l~~~~l~~~~l~vpi~EElfFRG~l~ 140 (222)
T TIGR03008 67 PRHLLFSAAVGVAVFVLWVNLDWLLPFQG-EPAG-----FDPSQIGNAGLTRWVLIAFRLAGATLVVPVMEELFWRSFLL 140 (222)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcC-Cccc-----cchhhhhcccchhhHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 57889999999998888776655544321 1111 1111111000 112222233455567789999999999999
Q ss_pred HHHHhh-c-------CCchhhHHHHHHHhhhcCCcchHHHHHHHHHHHHHHHHhcCCcchHHHHHHhHHhhhh
Q 000293 1589 EEIAAD-L-------DYHRGIIISGLAFALSQRSPQAIPGLWLLSLALAGVRQRSQGSLSVPIGLRTGIMASS 1653 (1712)
Q Consensus 1589 ~~L~~~-~-------g~~~AiIISSLLFALlHltl~~~i~lfLlGLvLa~ay~rttGSLWlpIGLHagWn~~~ 1653 (1712)
+.+.++ + ..|.|++++|++||+.|. .++..+++|++++++|.| |||||.||.+|+.||...
T Consensus 141 ~~l~~~~f~~~~~~~~~~~a~lisSllFal~H~---~~~~~~l~Gli~~~l~~~-tgsL~~~I~~H~~~N~ll 209 (222)
T TIGR03008 141 RYLQQSDFESVPGGRFHWPSFLAVTLLFGLEHH---LIVAGLIAGLAYNLLLLR-TGSIMACILAHAVTNGLL 209 (222)
T ss_pred HHHHHhcccccccccccHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHHHH
Confidence 999763 2 147899999999999996 456678889999999999 789999999999999753
No 41
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.62 E-value=3.2e-14 Score=172.68 Aligned_cols=105 Identities=15% Similarity=0.178 Sum_probs=69.7
Q ss_pred CCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHH-HHHH-HHHHHHhhCCCCcEE
Q 000293 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSD-DICT-AIQFIGKARPWTTLM 292 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~td-DL~a-VLd~I~kryP~spLv 292 (1712)
.+|+|||+||+++ +...|. ..+..+.+ +|+|+++|+||||.|.............. ++.+ +.+++. .....+++
T Consensus 104 ~~p~vvllHG~~~-~~~~~~-~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~-~l~~~~~~ 179 (402)
T PLN02894 104 DAPTLVMVHGYGA-SQGFFF-RNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRK-AKNLSNFI 179 (402)
T ss_pred CCCEEEEECCCCc-chhHHH-HHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHH-HcCCCCeE
Confidence 4689999999843 444443 45566654 69999999999999964321111111111 1222 223332 23446899
Q ss_pred EEEecHHHHHHHHHHHHcCCCCCccEEEEecCC
Q 000293 293 SVGWGYGANMLTKYLAEVGERTPLTAVTCIDNP 325 (1712)
Q Consensus 293 LVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P 325 (1712)
++||||||.+++.|+.++++ ++.++|+++++
T Consensus 180 lvGhS~GG~la~~~a~~~p~--~v~~lvl~~p~ 210 (402)
T PLN02894 180 LLGHSFGGYVAAKYALKHPE--HVQHLILVGPA 210 (402)
T ss_pred EEEECHHHHHHHHHHHhCch--hhcEEEEECCc
Confidence 99999999999999999865 68888888654
No 42
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.62 E-value=2e-14 Score=165.42 Aligned_cols=235 Identities=17% Similarity=0.194 Sum_probs=134.5
Q ss_pred CcEEEEeCCCCCCCh--hHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCC-CCcEE
Q 000293 216 DTTLLLVPGTAEGSI--EKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARP-WTTLM 292 (1712)
Q Consensus 216 ~PtVVLLHGltGGS~--~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP-~spLv 292 (1712)
.+.||++||+++... ...+..++..++++||+|+++|+||||.|..... ....+.+|+.++++++++..| ..+++
T Consensus 26 ~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~~--~~~~~~~d~~~~~~~l~~~~~g~~~i~ 103 (274)
T TIGR03100 26 TTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGENL--GFEGIDADIAAAIDAFREAAPHLRRIV 103 (274)
T ss_pred CCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC--CHHHHHHHHHHHHHHHHhhCCCCCcEE
Confidence 467888887543211 1224567889999999999999999999864321 112346899999999987764 35799
Q ss_pred EEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhHhHHHHHHHHHHHHHhhhhhhhccCCCCCHHHH
Q 000293 293 SVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKA 372 (1712)
Q Consensus 293 LVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~~La~~Lk~~L~~~~~lf~~~~~~~Die~I 372 (1712)
++||||||.+++.|+... .+++++|++++++........ ......+...+.+. .....++++ .++...+
T Consensus 104 l~G~S~Gg~~a~~~a~~~---~~v~~lil~~p~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~g---~~~~~~~ 172 (274)
T TIGR03100 104 AWGLCDAASAALLYAPAD---LRVAGLVLLNPWVRTEAAQAA----SRIRHYYLGQLLSA-DFWRKLLSG---EVNLGSS 172 (274)
T ss_pred EEEECHHHHHHHHHhhhC---CCccEEEEECCccCCcccchH----HHHHHHHHHHHhCh-HHHHHhcCC---CccHHHH
Confidence 999999999999887543 369999999876543221110 01111111111110 000111221 1232222
Q ss_pred hhhccHHHHHHHHh-h-hccchhcHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChH-----HHHHh--cCCCeE
Q 000293 373 LSAKSVRDFEKAIS-M-VSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIP-----RSSIA--ENPFTS 442 (1712)
Q Consensus 373 lkaktlrEFDd~~t-~-~~~Gf~sv~eYYr~aS~~~~L~kIkVPtLII~G-DDp~VP~~aip-----~~la~--~nPnv~ 442 (1712)
.+ .+...+. . +.........+ .......+..+++|+|+++| .|+..+.. .. ..... .+|+++
T Consensus 173 ~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~P~ll~~g~~D~~~~~~-~~~~~~~~~~~~~l~~~~v~ 244 (274)
T TIGR03100 173 LR-----GLGDALLKARQKGDEVAHGGL--AERMKAGLERFQGPVLFILSGNDLTAQEF-ADSVLGEPAWRGALEDPGIE 244 (274)
T ss_pred HH-----HHHHHHHhhhhcCCCcccchH--HHHHHHHHHhcCCcEEEEEcCcchhHHHH-HHHhccChhhHHHhhcCCeE
Confidence 11 1221110 0 00000000000 01123456788999999999 88765321 10 11122 348999
Q ss_pred EEEecCCCccccCCCCchhHHHHHHHHHHHH
Q 000293 443 LLLCSCLPSSVIGGGRAAESWCQNLVIEWLS 473 (1712)
Q Consensus 443 LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~ 473 (1712)
++.+++++|+...+ .....+.+.|.+||+
T Consensus 245 ~~~~~~~~H~l~~e--~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 245 RVEIDGADHTFSDR--VWREWVAARTTEWLR 273 (274)
T ss_pred EEecCCCCcccccH--HHHHHHHHHHHHHHh
Confidence 99999999955443 344568899999995
No 43
>PRK05855 short chain dehydrogenase; Validated
Probab=99.62 E-value=2.6e-14 Score=177.87 Aligned_cols=125 Identities=18% Similarity=0.172 Sum_probs=86.1
Q ss_pred EEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-CCc
Q 000293 189 VCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTS-RLF 267 (1712)
Q Consensus 189 e~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsp-rly 267 (1712)
+.+...||..+++.++.+ ..+|+|||+||+++ + ..+|..++..| ..||+|+++|+||||.|....+ ..|
T Consensus 5 ~~~~~~~g~~l~~~~~g~-------~~~~~ivllHG~~~-~-~~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~ 74 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGD-------PDRPTVVLVHGYPD-N-HEVWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAY 74 (582)
T ss_pred EEEEeeCCEEEEEEEcCC-------CCCCeEEEEcCCCc-h-HHHHHHHHHHh-hcceEEEEecCCCCCCCCCCCccccc
Confidence 444556898998876543 13689999999843 3 33456677776 7789999999999999964332 223
Q ss_pred c-cCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCC
Q 000293 268 T-AADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPF 326 (1712)
Q Consensus 268 ~-a~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~ 326 (1712)
+ ....+|+..+++++. +..+++++||||||.+++.++........+..++.++.+.
T Consensus 75 ~~~~~a~dl~~~i~~l~---~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~ 131 (582)
T PRK05855 75 TLARLADDFAAVIDAVS---PDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPS 131 (582)
T ss_pred CHHHHHHHHHHHHHHhC---CCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCc
Confidence 3 244678888888764 2346999999999999988876632223455555555443
No 44
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.61 E-value=4.2e-15 Score=175.86 Aligned_cols=223 Identities=13% Similarity=0.105 Sum_probs=119.5
Q ss_pred HHHHHHH---HHHhCCcEEEEEcCCCCCCCCCCCCCCcc-cCcHHHHHHHHHHHHhhCCCCc-EEEEEecHHHHHHHHHH
Q 000293 233 RIRLFVC---EALRRGFFPVVMNPRGCGGSPLTTSRLFT-AADSDDICTAIQFIGKARPWTT-LMSVGWGYGANMLTKYL 307 (1712)
Q Consensus 233 Yir~La~---~Llq~GYrVVVfD~RGhGgS~ltsprly~-a~~tdDL~aVLd~I~kryP~sp-LvLVGhSMGG~IaL~YL 307 (1712)
+|..++. .|...+|+|+++|+||||.|... .|. ....+|+.++++++. ..+ +++|||||||++++.++
T Consensus 84 ~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~---~~~~~~~a~dl~~ll~~l~----l~~~~~lvG~SmGG~vA~~~A 156 (343)
T PRK08775 84 WWEGLVGSGRALDPARFRLLAFDFIGADGSLDV---PIDTADQADAIALLLDALG----IARLHAFVGYSYGALVGLQFA 156 (343)
T ss_pred cchhccCCCCccCccccEEEEEeCCCCCCCCCC---CCCHHHHHHHHHHHHHHcC----CCcceEEEEECHHHHHHHHHH
Confidence 5555664 34456899999999999988422 222 234677777777763 234 57999999999999999
Q ss_pred HHcCCCCCccEEEEecCCCChhhhhccCchhhHhHHHH---------HH--HHHH-H-HH---h---hhhhhhccCC---
Q 000293 308 AEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKL---------AN--GLID-I-LR---S---NKELFKGRAK--- 365 (1712)
Q Consensus 308 ge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~~L---------a~--~Lk~-~-L~---~---~~~lf~~~~~--- 365 (1712)
.++++ +|.++|++++..........+ ........ .. .+.+ . +. . ....|.....
T Consensus 157 ~~~P~--~V~~LvLi~s~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (343)
T PRK08775 157 SRHPA--RVRTLVVVSGAHRAHPYAAAW--RALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVIN 232 (343)
T ss_pred HHChH--hhheEEEECccccCCHHHHHH--HHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccC
Confidence 99876 699999998764321110000 00000000 00 0000 0 00 0 0001110000
Q ss_pred ---CCCHHHHhhhccHHHHHHHHhhhccchhcHHHHHhhcC-cchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcC-C
Q 000293 366 ---GFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSS-TRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAEN-P 439 (1712)
Q Consensus 366 ---~~Die~IlkaktlrEFDd~~t~~~~Gf~sv~eYYr~aS-~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~n-P 439 (1712)
..+.... +......... .........+.+... ....+++|++|+|+|+| +|.++|+.... .+.+.. |
T Consensus 233 ~~~~~~~~~~-----l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~-~~~~~i~p 305 (343)
T PRK08775 233 GRVRVAAEDY-----LDAAGAQYVA-RTPVNAYLRLSESIDLHRVDPEAIRVPTVVVAVEGDRLVPLADLV-ELAEGLGP 305 (343)
T ss_pred CCccchHHHH-----HHHHHHHHHH-hcChhHHHHHHHHHhhcCCChhcCCCCeEEEEeCCCEeeCHHHHH-HHHHHcCC
Confidence 0000000 0000000000 000000001111111 12247899999999999 88888865443 334444 7
Q ss_pred CeEEEEecC-CCccccCCCCchhHHHHHHHHHHHHHHH
Q 000293 440 FTSLLLCSC-LPSSVIGGGRAAESWCQNLVIEWLSAVE 476 (1712)
Q Consensus 440 nv~LvLt~g-GHH~gF~e~~~~~sWv~r~VlEFL~av~ 476 (1712)
+++++++++ +||..+.+ . ...+.+.+.+||.+..
T Consensus 306 ~a~l~~i~~~aGH~~~lE--~-Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 306 RGSLRVLRSPYGHDAFLK--E-TDRIDAILTTALRSTG 340 (343)
T ss_pred CCeEEEEeCCccHHHHhc--C-HHHHHHHHHHHHHhcc
Confidence 899999974 77777765 2 3468999999998754
No 45
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.59 E-value=2.3e-14 Score=166.34 Aligned_cols=248 Identities=17% Similarity=0.189 Sum_probs=151.1
Q ss_pred CCCcEEEEeCCCCCCChhHH-HHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-CCccc-CcHHHHHHHHHHHHhhCCCCc
Q 000293 214 GLDTTLLLVPGTAEGSIEKR-IRLFVCEALRRGFFPVVMNPRGCGGSPLTTS-RLFTA-ADSDDICTAIQFIGKARPWTT 290 (1712)
Q Consensus 214 ~~~PtVVLLHGltGGS~~sY-ir~La~~Llq~GYrVVVfD~RGhGgS~ltsp-rly~a-~~tdDL~aVLd~I~kryP~sp 290 (1712)
+.+|.|+++||++. .+| ||+....++.+||||+++|+||+|.|..+.. .-|+. ..+.|+..+|+++. ..+
T Consensus 42 ~~gP~illlHGfPe---~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg----~~k 114 (322)
T KOG4178|consen 42 GDGPIVLLLHGFPE---SWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLG----LKK 114 (322)
T ss_pred CCCCEEEEEccCCc---cchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhc----cce
Confidence 46799999999975 333 6778889999999999999999999975544 33443 23589999999886 579
Q ss_pred EEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChh-----hhhccC---chhh-----------HhHHHHHHHHHH
Q 000293 291 LMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLE-----EATRSS---PHHI-----------ALDEKLANGLID 351 (1712)
Q Consensus 291 LvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~-----e~~~sl---~~~~-----------ly~~~La~~Lk~ 351 (1712)
++++||+|||+++...+..+++ ++.+.|+++.++... ...... .+.. .+....++.+..
T Consensus 115 ~~lvgHDwGaivaw~la~~~Pe--rv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~ 192 (322)
T KOG4178|consen 115 AFLVGHDWGAIVAWRLALFYPE--RVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVK 192 (322)
T ss_pred eEEEeccchhHHHHHHHHhChh--hcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccchhHHhHH
Confidence 9999999999999999988876 799999998877611 001110 0000 011111111111
Q ss_pred HHHhhhhhhhccCC---CCCHHHHhhhccHHHHHHHHhhhccchhcHHHHHhhcCc-----chhcCcCCccEEEEEe-CC
Q 000293 352 ILRSNKELFKGRAK---GFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSST-----RSVVGNIKIPVLFIQN-DA 422 (1712)
Q Consensus 352 ~L~~~~~lf~~~~~---~~Die~IlkaktlrEFDd~~t~~~~Gf~sv~eYYr~aS~-----~~~L~kIkVPtLII~G-DD 422 (1712)
.+.......+...+ .... .-.....++-++..+ ..-|+....+||+.... ...+.+|++|+++|+| .|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~-~w~t~edi~~~~~~f--~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D 269 (322)
T KOG4178|consen 193 TFRTRKTPGPLIVPKQPNENP-LWLTEEDIAFYVSKF--QIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLD 269 (322)
T ss_pred hhhccccCCccccCCCCCCcc-chhhHHHHHHHHhcc--ccccccccchhhHHHhhCchhccccccccccceEEEEecCc
Confidence 11111100000000 0000 000011122222222 12345555667775432 3457899999999999 89
Q ss_pred CCCCCCChHHHHHhcCCCe-EEEEecCCCccccCCCCchhHHHHHHHHHHHHHHH
Q 000293 423 GAVPPFSIPRSSIAENPFT-SLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVE 476 (1712)
Q Consensus 423 p~VP~~aip~~la~~nPnv-~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~ 476 (1712)
++.+.........+..|+. +.++++++||..-.+ ++. .+.+.+.+||++..
T Consensus 270 ~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe--~p~-~v~~~i~~f~~~~~ 321 (322)
T KOG4178|consen 270 PVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQE--KPQ-EVNQAILGFINSFS 321 (322)
T ss_pred ccccchhHHHHHHHhhccccceEEecCCccccccc--CHH-HHHHHHHHHHHhhc
Confidence 8876542222223445665 678889999944333 333 58899999998753
No 46
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.58 E-value=3.6e-14 Score=168.45 Aligned_cols=126 Identities=11% Similarity=0.084 Sum_probs=79.5
Q ss_pred CCcEEEEE-ecCCCcccccCCCCcEEEEeCCCCCCChhH---------HHHHHH---HHHHhCCcEEEEEcCCC--CCCC
Q 000293 195 DGGVISLD-WPSNLDLHEEHGLDTTLLLVPGTAEGSIEK---------RIRLFV---CEALRRGFFPVVMNPRG--CGGS 259 (1712)
Q Consensus 195 DGg~LaLD-W~~~~~~~~~~~~~PtVVLLHGltGGS~~s---------Yir~La---~~Llq~GYrVVVfD~RG--hGgS 259 (1712)
+|..+.|. |..+. ...+++|||+||+++.++.. ||..++ ..+...+|+|+++|+|| ||.|
T Consensus 14 ~~~~~~y~~~g~~~-----~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s 88 (351)
T TIGR01392 14 SDVRVAYETYGTLN-----AERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGST 88 (351)
T ss_pred CCceEEEEeccccC-----CCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCC
Confidence 45566664 54321 12357999999986533322 455454 25667899999999999 4444
Q ss_pred CCC----CCCCcc----cCcHHHHHHHHHHHHhhCCCCc-EEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCC
Q 000293 260 PLT----TSRLFT----AADSDDICTAIQFIGKARPWTT-LMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFD 327 (1712)
Q Consensus 260 ~lt----sprly~----a~~tdDL~aVLd~I~kryP~sp-LvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~D 327 (1712)
... ....|. ....+|+...+..+.+.....+ ++++||||||++++.|+.++++ .++++|++++...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~ 163 (351)
T TIGR01392 89 GPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPE--RVRAIVVLATSAR 163 (351)
T ss_pred CCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChH--hhheEEEEccCCc
Confidence 321 111111 1123444443333333344566 9999999999999999999875 6899999987654
No 47
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.58 E-value=6.4e-14 Score=168.58 Aligned_cols=105 Identities=13% Similarity=0.142 Sum_probs=72.2
Q ss_pred CcEEEEeCCCCCCChhH------------HHHHHHH---HHHhCCcEEEEEcCCC-CCCCCCCC---C---C-------C
Q 000293 216 DTTLLLVPGTAEGSIEK------------RIRLFVC---EALRRGFFPVVMNPRG-CGGSPLTT---S---R-------L 266 (1712)
Q Consensus 216 ~PtVVLLHGltGGS~~s------------Yir~La~---~Llq~GYrVVVfD~RG-hGgS~lts---p---r-------l 266 (1712)
+|+|||+||+++ +... +|..++. .+...+|+|+++|+|| ||+|.... + . .
T Consensus 48 ~p~vvl~HG~~~-~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~ 126 (379)
T PRK00175 48 SNAVLICHALTG-DHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPV 126 (379)
T ss_pred CCEEEEeCCcCC-chhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCc
Confidence 589999999965 4432 3555542 4446799999999998 45553211 0 0 1
Q ss_pred ccc-CcHHHHHHHHHHHHhhCCCCc-EEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCC
Q 000293 267 FTA-ADSDDICTAIQFIGKARPWTT-LMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFD 327 (1712)
Q Consensus 267 y~a-~~tdDL~aVLd~I~kryP~sp-LvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~D 327 (1712)
|+. .+.+|+.++++++ +..+ ++++||||||++++.|+.++++ ++.++|++++...
T Consensus 127 ~~~~~~~~~~~~~l~~l----~~~~~~~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~ 183 (379)
T PRK00175 127 ITIRDWVRAQARLLDAL----GITRLAAVVGGSMGGMQALEWAIDYPD--RVRSALVIASSAR 183 (379)
T ss_pred CCHHHHHHHHHHHHHHh----CCCCceEEEEECHHHHHHHHHHHhChH--hhhEEEEECCCcc
Confidence 221 2345666666655 4456 5899999999999999999876 6999999986553
No 48
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.57 E-value=4.9e-14 Score=166.24 Aligned_cols=232 Identities=16% Similarity=0.155 Sum_probs=125.8
Q ss_pred CCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEEE
Q 000293 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSV 294 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spLvLV 294 (1712)
.+++|||+||++ ++... +..++..|. .+|+|+++|+||||.|...... ...+|+.+.+..+...++..+++++
T Consensus 130 ~~~~vl~~HG~~-~~~~~-~~~~~~~l~-~~~~v~~~d~~g~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~lv 202 (371)
T PRK14875 130 DGTPVVLIHGFG-GDLNN-WLFNHAALA-AGRPVIALDLPGHGASSKAVGA----GSLDELAAAVLAFLDALGIERAHLV 202 (371)
T ss_pred CCCeEEEECCCC-Cccch-HHHHHHHHh-cCCEEEEEcCCCCCCCCCCCCC----CCHHHHHHHHHHHHHhcCCccEEEE
Confidence 358999999984 34433 344565554 4599999999999998532221 2344555544444455555689999
Q ss_pred EecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhHhHHHHHHHHHHHHHhhhhhhhccCCCCCH---HH
Q 000293 295 GWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRAKGFDV---EK 371 (1712)
Q Consensus 295 GhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~~La~~Lk~~L~~~~~lf~~~~~~~Di---e~ 371 (1712)
||||||.+++.++..+++ ++.++++++++.........+...+... .....+...+.. .+... ..+.. ..
T Consensus 203 G~S~Gg~~a~~~a~~~~~--~v~~lv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~-~~~~~~~~~~ 275 (371)
T PRK14875 203 GHSMGGAVALRLAARAPQ--RVASLTLIAPAGLGPEINGDYIDGFVAA-ESRRELKPVLEL---LFADP-ALVTRQMVED 275 (371)
T ss_pred eechHHHHHHHHHHhCch--heeEEEEECcCCcCcccchhHHHHhhcc-cchhHHHHHHHH---HhcCh-hhCCHHHHHH
Confidence 999999999999988754 5888888876532211100000000000 000001111110 01000 00000 00
Q ss_pred HhhhccHHHHHHHHhhhccchhcHHHHH-h----hcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEE
Q 000293 372 ALSAKSVRDFEKAISMVSYGFEAIEDFY-S----KSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLL 445 (1712)
Q Consensus 372 IlkaktlrEFDd~~t~~~~Gf~sv~eYY-r----~aS~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~nPnv~LvL 445 (1712)
.............+ .....++ . ..+....+.++++|+|+|+| +|.++|+.... ...+++.+.+
T Consensus 276 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~----~l~~~~~~~~ 344 (371)
T PRK14875 276 LLKYKRLDGVDDAL-------RALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQ----GLPDGVAVHV 344 (371)
T ss_pred HHHHhccccHHHHH-------HHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHh----hccCCCeEEE
Confidence 00000000000000 0000110 0 11223457789999999999 89888864321 2345788999
Q ss_pred ecCCCccccCCCCchhHHHHHHHHHHHHH
Q 000293 446 CSCLPSSVIGGGRAAESWCQNLVIEWLSA 474 (1712)
Q Consensus 446 t~gGHH~gF~e~~~~~sWv~r~VlEFL~a 474 (1712)
++++||..+.+. ..++.+.+.+||+.
T Consensus 345 ~~~~gH~~~~e~---p~~~~~~i~~fl~~ 370 (371)
T PRK14875 345 LPGAGHMPQMEA---AADVNRLLAEFLGK 370 (371)
T ss_pred eCCCCCChhhhC---HHHHHHHHHHHhcc
Confidence 998888777652 34678888888863
No 49
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.57 E-value=3.1e-14 Score=169.04 Aligned_cols=106 Identities=18% Similarity=0.184 Sum_probs=85.2
Q ss_pred CcEEEEeCCCCCCChhHHH------HHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCccc-CcH-HHHHHHHHHHHhhCC
Q 000293 216 DTTLLLVPGTAEGSIEKRI------RLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTA-ADS-DDICTAIQFIGKARP 287 (1712)
Q Consensus 216 ~PtVVLLHGltGGS~~sYi------r~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a-~~t-dDL~aVLd~I~kryP 287 (1712)
+++||++||+.. ..|+ +.++.+|+++||+|+++|+||+|.+.. .+.. .+. +|+.++++++.++.+
T Consensus 62 ~~pvl~v~~~~~---~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~----~~~~~d~~~~~~~~~v~~l~~~~~ 134 (350)
T TIGR01836 62 KTPLLIVYALVN---RPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADR----YLTLDDYINGYIDKCVDYICRTSK 134 (350)
T ss_pred CCcEEEeccccc---cceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHh----cCCHHHHHHHHHHHHHHHHHHHhC
Confidence 457999999732 2333 578999999999999999999987642 1222 222 568899999999888
Q ss_pred CCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhh
Q 000293 288 WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEE 330 (1712)
Q Consensus 288 ~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e 330 (1712)
..+++++||||||++++.|++.+++ .+++++++++|+++..
T Consensus 135 ~~~i~lvGhS~GG~i~~~~~~~~~~--~v~~lv~~~~p~~~~~ 175 (350)
T TIGR01836 135 LDQISLLGICQGGTFSLCYAALYPD--KIKNLVTMVTPVDFET 175 (350)
T ss_pred CCcccEEEECHHHHHHHHHHHhCch--heeeEEEeccccccCC
Confidence 8899999999999999999998765 5899999999998643
No 50
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.57 E-value=3.2e-14 Score=168.44 Aligned_cols=274 Identities=18% Similarity=0.142 Sum_probs=153.1
Q ss_pred ceEEEEEEcCCCc-EEEEEecCCCcc--cccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhC-CcEEEEEcCCCCC-CC
Q 000293 185 EYQRVCVNTEDGG-VISLDWPSNLDL--HEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRR-GFFPVVMNPRGCG-GS 259 (1712)
Q Consensus 185 ~YrRe~Ltt~DGg-~LaLDW~~~~~~--~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~-GYrVVVfD~RGhG-gS 259 (1712)
.++...++.+.|. .+..-|...... .+....+++||++|||.+ + ..+|++.+..+.+. |++|+++|..|+| .|
T Consensus 24 ~~~~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~-~-~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s 101 (326)
T KOG1454|consen 24 TLRSTSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGA-S-SFSWRRVVPLLSKAKGLRVLAIDLPGHGYSS 101 (326)
T ss_pred cccceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccC-C-cccHhhhccccccccceEEEEEecCCCCcCC
Confidence 3344556777774 666678765310 011146789999999943 3 34566677766655 5999999999999 55
Q ss_pred CCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEE---EecCCCChhhhhccCc
Q 000293 260 PLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVT---CIDNPFDLEEATRSSP 336 (1712)
Q Consensus 260 ~ltsprly~a~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaV---lIS~P~Dl~e~~~sl~ 336 (1712)
+......|. ..+....+..+...+...++++|||||||.+++.+|+.+++ .++.++ +++++..........
T Consensus 102 ~~~~~~~y~---~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~--~V~~lv~~~~~~~~~~~~~~~~~~- 175 (326)
T KOG1454|consen 102 PLPRGPLYT---LRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPE--TVDSLVLLDLLGPPVYSTPKGIKG- 175 (326)
T ss_pred CCCCCCcee---hhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcc--cccceeeecccccccccCCcchhH-
Confidence 444444443 35666666666666667789999999999999999999986 578888 666665443222110
Q ss_pred hhhHhHHHHHHHHHHHHHhhhhhhhccCCCCCHHHHhh---------hccHHHHHHHHhhh--ccchhc-HHHHHh----
Q 000293 337 HHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALS---------AKSVRDFEKAISMV--SYGFEA-IEDFYS---- 400 (1712)
Q Consensus 337 ~~~ly~~~La~~Lk~~L~~~~~lf~~~~~~~Die~Ilk---------aktlrEFDd~~t~~--~~Gf~s-v~eYYr---- 400 (1712)
..+.+.. +......................+.. ......+.+.+..+ .+.+++ ..+++.
T Consensus 176 ----~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (326)
T KOG1454|consen 176 ----LRRLLDK-FLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLG 250 (326)
T ss_pred ----HHHhhhh-hccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccC
Confidence 0000000 00000000000000000000000000 00111111111111 000000 000111
Q ss_pred -hcCcchhcCcCC-ccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHH
Q 000293 401 -KSSTRSVVGNIK-IPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAV 475 (1712)
Q Consensus 401 -~aS~~~~L~kIk-VPtLII~G-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av 475 (1712)
.......+.+|. +|+|+|+| .|+++|.+. .....+.+|++++++.+++||+.-.+ .+. -+.+.+..|+...
T Consensus 251 ~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~-~~~~~~~~pn~~~~~I~~~gH~~h~e--~Pe-~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 251 FDENLLSLIKKIWKCPVLIIWGDKDQIVPLEL-AEELKKKLPNAELVEIPGAGHLPHLE--RPE-EVAALLRSFIARL 324 (326)
T ss_pred ccchHHHhhccccCCceEEEEcCcCCccCHHH-HHHHHhhCCCceEEEeCCCCcccccC--CHH-HHHHHHHHHHHHh
Confidence 012234567777 99999999 999999873 34455667999999999777766654 233 5789999999865
No 51
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.56 E-value=2.5e-14 Score=154.84 Aligned_cols=205 Identities=21% Similarity=0.214 Sum_probs=120.3
Q ss_pred cEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCC
Q 000293 246 FFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNP 325 (1712)
Q Consensus 246 YrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P 325 (1712)
|+|+++|+||+|.|.......+.....+|+.+.++++.++.+..+++++||||||++++.|++.+++ +|.++++++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~--~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPE--RVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGG--GEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCch--hhcCcEEEeee
Confidence 8999999999999972101223334578999999999988888899999999999999999999987 79999999887
Q ss_pred CC--hhhhhccCchhhHhHHHHHHH----HHHHHHhhhhhhh----c--cCCCCCHHHHhhhccHHHHHHHHhhhccc-h
Q 000293 326 FD--LEEATRSSPHHIALDEKLANG----LIDILRSNKELFK----G--RAKGFDVEKALSAKSVRDFEKAISMVSYG-F 392 (1712)
Q Consensus 326 ~D--l~e~~~sl~~~~ly~~~La~~----Lk~~L~~~~~lf~----~--~~~~~Die~IlkaktlrEFDd~~t~~~~G-f 392 (1712)
.. .......... ..+...+... +...+......+. . .....+............+. ......+ +
T Consensus 79 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 155 (230)
T PF00561_consen 79 PDLPDGLWNRIWPR-GNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFA--ETDAFDNMF 155 (230)
T ss_dssp SHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTC--HHHHHHHHH
T ss_pred ccchhhhhHHHHhh-hhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHH--HHHHHhhhc
Confidence 31 1111111000 0011111000 0000000000000 0 00000000000000011100 0000001 1
Q ss_pred hcHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCccccCC
Q 000293 393 EAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGG 456 (1712)
Q Consensus 393 ~sv~eYYr~aS~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e 456 (1712)
.....++........+.+|++|+|+++| +|+++|+..... ..+..|+.++++++++||..+.+
T Consensus 156 ~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~-~~~~~~~~~~~~~~~~GH~~~~~ 219 (230)
T PF00561_consen 156 WNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQ-LAKLIPNSQLVLIEGSGHFAFLE 219 (230)
T ss_dssp HHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHH-HHHHSTTEEEEEETTCCSTHHHH
T ss_pred cccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHH-HHHhcCCCEEEECCCCChHHHhc
Confidence 1234555555666778899999999999 899999876554 56789999999999988877765
No 52
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.55 E-value=2.7e-13 Score=163.80 Aligned_cols=128 Identities=13% Similarity=0.094 Sum_probs=88.8
Q ss_pred cceEEEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q 000293 184 LEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTT 263 (1712)
Q Consensus 184 v~YrRe~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~lts 263 (1712)
+...+......||..+.+.-.. ...+|+|||+||+++ +.. .|+.++..|. .+|+|+++|+||||.|....
T Consensus 102 ~~~~~~~~~~~~~~~~~y~~~G-------~~~~~~ivllHG~~~-~~~-~w~~~~~~L~-~~~~Via~DlpG~G~S~~p~ 171 (383)
T PLN03084 102 LKMGAQSQASSDLFRWFCVESG-------SNNNPPVLLIHGFPS-QAY-SYRKVLPVLS-KNYHAIAFDWLGFGFSDKPQ 171 (383)
T ss_pred ccccceeEEcCCceEEEEEecC-------CCCCCeEEEECCCCC-CHH-HHHHHHHHHh-cCCEEEEECCCCCCCCCCCc
Confidence 4444444444566665543211 123589999999843 333 3566777665 58999999999999996543
Q ss_pred CC---Cccc-CcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCC
Q 000293 264 SR---LFTA-ADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFD 327 (1712)
Q Consensus 264 pr---ly~a-~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~D 327 (1712)
.. .|.. .+++|+.++++.+. ..++++|||||||++++.|+.++++ .+.++|+++++..
T Consensus 172 ~~~~~~ys~~~~a~~l~~~i~~l~----~~~~~LvG~s~GG~ia~~~a~~~P~--~v~~lILi~~~~~ 233 (383)
T PLN03084 172 PGYGFNYTLDEYVSSLESLIDELK----SDKVSLVVQGYFSPPVVKYASAHPD--KIKKLILLNPPLT 233 (383)
T ss_pred ccccccCCHHHHHHHHHHHHHHhC----CCCceEEEECHHHHHHHHHHHhChH--hhcEEEEECCCCc
Confidence 21 2332 34577777777764 3579999999999999999998876 6999999998753
No 53
>PRK10566 esterase; Provisional
Probab=99.53 E-value=1.2e-13 Score=154.67 Aligned_cols=206 Identities=14% Similarity=0.114 Sum_probs=121.0
Q ss_pred CCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC--CC---cc--cCcHHHHHHHHHHHHhhC-
Q 000293 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTS--RL---FT--AADSDDICTAIQFIGKAR- 286 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsp--rl---y~--a~~tdDL~aVLd~I~kry- 286 (1712)
..|+||++||+++ +.. .+..++..+.++||+|+++|+||||.+....+ .. +. ....+|+.++++++.++.
T Consensus 26 ~~p~vv~~HG~~~-~~~-~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (249)
T PRK10566 26 PLPTVFFYHGFTS-SKL-VYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGW 103 (249)
T ss_pred CCCEEEEeCCCCc-ccc-hHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4689999999854 333 34568889999999999999999997532111 11 10 012478888888887653
Q ss_pred -CCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhHhHHHHHHHHHHHHHhhhhhhhccCC
Q 000293 287 -PWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRAK 365 (1712)
Q Consensus 287 -P~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~~La~~Lk~~L~~~~~lf~~~~~ 365 (1712)
...+++++||||||.+++.++...++ +.+++.+..+..... +.+.+ ++....
T Consensus 104 ~~~~~i~v~G~S~Gg~~al~~~~~~~~---~~~~~~~~~~~~~~~------------------~~~~~------~~~~~~ 156 (249)
T PRK10566 104 LLDDRLAVGGASMGGMTALGIMARHPW---VKCVASLMGSGYFTS------------------LARTL------FPPLIP 156 (249)
T ss_pred cCccceeEEeecccHHHHHHHHHhCCC---eeEEEEeeCcHHHHH------------------HHHHh------cccccc
Confidence 34689999999999999988877543 555544432211000 00000 000000
Q ss_pred CCCHHHHhhhccHHHHHHHHhhhccchhcHHHHHhhcCcchhcCcC-CccEEEEEe-CCCCCCCCChHH--HHHhc--CC
Q 000293 366 GFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNI-KIPVLFIQN-DAGAVPPFSIPR--SSIAE--NP 439 (1712)
Q Consensus 366 ~~Die~IlkaktlrEFDd~~t~~~~Gf~sv~eYYr~aS~~~~L~kI-kVPtLII~G-DDp~VP~~aip~--~la~~--nP 439 (1712)
. . ......++..+ . .+...+....+.++ ++|+|+||| +|+++|+..... ..... .+
T Consensus 157 ~-~------~~~~~~~~~~~-~----------~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~ 218 (249)
T PRK10566 157 E-T------AAQQAEFNNIV-A----------PLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLD 218 (249)
T ss_pred c-c------cccHHHHHHHH-H----------HHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCC
Confidence 0 0 00111111111 0 01112233446666 699999999 999999754322 11122 22
Q ss_pred -CeEEEEecCCCccccCCCCchhHHHHHHHHHHHHH
Q 000293 440 -FTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSA 474 (1712)
Q Consensus 440 -nv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~a 474 (1712)
+++++.+++++|... +. ..+.+.+||+.
T Consensus 219 ~~~~~~~~~~~~H~~~-----~~--~~~~~~~fl~~ 247 (249)
T PRK10566 219 KNLTCLWEPGVRHRIT-----PE--ALDAGVAFFRQ 247 (249)
T ss_pred cceEEEecCCCCCccC-----HH--HHHHHHHHHHh
Confidence 468888999999642 12 45789999974
No 54
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.51 E-value=4.7e-13 Score=170.81 Aligned_cols=245 Identities=17% Similarity=0.157 Sum_probs=159.9
Q ss_pred CcceEEEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q 000293 183 KLEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLT 262 (1712)
Q Consensus 183 ~v~YrRe~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~lt 262 (1712)
....+...+...||.++.. |...++........|+||++||.+.+.....+....+.++.+||.|+.+|+||.++....
T Consensus 362 ~~~~e~~~~~~~dG~~i~~-~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~ 440 (620)
T COG1506 362 LAEPEPVTYKSNDGETIHG-WLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGRE 440 (620)
T ss_pred cCCceEEEEEcCCCCEEEE-EEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHH
Confidence 3455677789999998885 444322222222358999999986544333355677889999999999999998775211
Q ss_pred ----CCCCcccCcHHHHHHHHHHHHhhCC---CCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccC
Q 000293 263 ----TSRLFTAADSDDICTAIQFIGKARP---WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSS 335 (1712)
Q Consensus 263 ----sprly~a~~tdDL~aVLd~I~kryP---~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl 335 (1712)
...-+.....+|+.++++++.+ +| ..+++++|||+||.+.+..++..+ .++++++..++.+.......
T Consensus 441 F~~~~~~~~g~~~~~D~~~~~~~l~~-~~~~d~~ri~i~G~SyGGymtl~~~~~~~---~f~a~~~~~~~~~~~~~~~~- 515 (620)
T COG1506 441 FADAIRGDWGGVDLEDLIAAVDALVK-LPLVDPERIGITGGSYGGYMTLLAATKTP---RFKAAVAVAGGVDWLLYFGE- 515 (620)
T ss_pred HHHhhhhccCCccHHHHHHHHHHHHh-CCCcChHHeEEeccChHHHHHHHHHhcCc---hhheEEeccCcchhhhhccc-
Confidence 1223444567999999996644 44 248999999999999998888764 47788777655433211100
Q ss_pred chhhHhHHHHHHHHHHHHHhhhhhhhccCCCCCHHHHhhhccHHHHHHHHhhhccchhcHHHHHhhcCcchhcCcCCccE
Q 000293 336 PHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPV 415 (1712)
Q Consensus 336 ~~~~ly~~~La~~Lk~~L~~~~~lf~~~~~~~Die~IlkaktlrEFDd~~t~~~~Gf~sv~eYYr~aS~~~~L~kIkVPt 415 (1712)
+ ...+. +++ ++.. .+.....++|...|+..+..+|++|+
T Consensus 516 -----~----~~~~~----------------~~~------------~~~~----~~~~~~~~~~~~~sp~~~~~~i~~P~ 554 (620)
T COG1506 516 -----S----TEGLR----------------FDP------------EENG----GGPPEDREKYEDRSPIFYADNIKTPL 554 (620)
T ss_pred -----c----chhhc----------------CCH------------HHhC----CCcccChHHHHhcChhhhhcccCCCE
Confidence 0 00000 000 0000 00000346788889999999999999
Q ss_pred EEEEe-CCCCCCCCChH---HHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHHH
Q 000293 416 LFIQN-DAGAVPPFSIP---RSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVE 476 (1712)
Q Consensus 416 LII~G-DDp~VP~~aip---~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~ 476 (1712)
|+||| .|+.||.+... ..+....-.++++++|+.+|.+-.. .+..-+.+.+++||++..
T Consensus 555 LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~--~~~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 555 LLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRP--ENRVKVLKEILDWFKRHL 617 (620)
T ss_pred EEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCc--hhHHHHHHHHHHHHHHHh
Confidence 99999 89999875332 2344456778999999999955542 222234578888887654
No 55
>COG1266 Predicted metal-dependent membrane protease [General function prediction only]
Probab=99.51 E-value=5.5e-13 Score=146.78 Aligned_cols=83 Identities=35% Similarity=0.338 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHhhcCCchhhHHHHHHHhhhcCC----cchHHHHHHHHHHHHHHHHhcCCcchHHH
Q 000293 1568 GIVTATVVVLVEELLFRSWLPEEIAADLDYHRGIIISGLAFALSQRS----PQAIPGLWLLSLALAGVRQRSQGSLSVPI 1643 (1712)
Q Consensus 1568 ~llvallvgi~EELLFRG~L~~~L~~~~g~~~AiIISSLLFALlHlt----l~~~i~lfLlGLvLa~ay~rttGSLWlpI 1643 (1712)
.+...+++|++||++|||++++.+.++++.|.|++++|++||++|.. +..++..+.+|++++++|.| +||||.++
T Consensus 126 ~~~~~i~~~l~EEl~fRg~l~~~l~~~~~~~~a~iissllFal~H~~~~~~~~~~~~~~~~gli~~~~~~~-t~~l~~~i 204 (226)
T COG1266 126 FLVLLILAPLAEELLFRGYLLGALARRFGPLLAIIISSLLFALLHLPNGLLLLYFLLYFIAGLILGLLYLR-TGSLWVPI 204 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHhcCcHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHH-hCCcHHHH
Confidence 45556677999999999999999999999999999999999999994 47788899999999999999 66899999
Q ss_pred HHHhHHhh
Q 000293 1644 GLRTGIMA 1651 (1712)
Q Consensus 1644 GLHagWn~ 1651 (1712)
++|+.||.
T Consensus 205 ~~H~~~N~ 212 (226)
T COG1266 205 LLHALINL 212 (226)
T ss_pred HHHHHHHH
Confidence 99999995
No 56
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.50 E-value=8.8e-13 Score=152.02 Aligned_cols=106 Identities=11% Similarity=0.129 Sum_probs=74.0
Q ss_pred CCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEE
Q 000293 214 GLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMS 293 (1712)
Q Consensus 214 ~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spLvL 293 (1712)
+.+|+|||+||+.+ +.. .|..++..|.++||+|+++|+||||.|.......++. .++...+++++.......++++
T Consensus 16 ~~~p~vvliHG~~~-~~~-~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~--~~~~~~l~~~i~~l~~~~~v~l 91 (273)
T PLN02211 16 RQPPHFVLIHGISG-GSW-CWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTF--DEYNKPLIDFLSSLPENEKVIL 91 (273)
T ss_pred CCCCeEEEECCCCC-CcC-cHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCH--HHHHHHHHHHHHhcCCCCCEEE
Confidence 34689999999854 333 4566788888899999999999999875322222221 2223334444433222468999
Q ss_pred EEecHHHHHHHHHHHHcCCCCCccEEEEecCC
Q 000293 294 VGWGYGANMLTKYLAEVGERTPLTAVTCIDNP 325 (1712)
Q Consensus 294 VGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P 325 (1712)
|||||||.++..++..+++ .+.++|.+++.
T Consensus 92 vGhS~GG~v~~~~a~~~p~--~v~~lv~~~~~ 121 (273)
T PLN02211 92 VGHSAGGLSVTQAIHRFPK--KICLAVYVAAT 121 (273)
T ss_pred EEECchHHHHHHHHHhChh--heeEEEEeccc
Confidence 9999999999999887654 68888888653
No 57
>PF02517 Abi: CAAX protease self-immunity; InterPro: IPR003675 Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide is removed by one of the CAAX prenyl proteases). The family contains the Q03530 from SWISSPROT CAAX prenyl protease []. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding []. While these proteins are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity []. This family also includes lysostaphin resistance protein A [].; GO: 0016020 membrane
Probab=99.49 E-value=8.2e-14 Score=134.65 Aligned_cols=83 Identities=25% Similarity=0.257 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHhhcCCchhhHHHHHHHhhhcCCc-chHHHHHHHHHHHHHHHHhcCCcchHHHHHH
Q 000293 1568 GIVTATVVVLVEELLFRSWLPEEIAADLDYHRGIIISGLAFALSQRSP-QAIPGLWLLSLALAGVRQRSQGSLSVPIGLR 1646 (1712)
Q Consensus 1568 ~llvallvgi~EELLFRG~L~~~L~~~~g~~~AiIISSLLFALlHltl-~~~i~lfLlGLvLa~ay~rttGSLWlpIGLH 1646 (1712)
.+...++.|+.||++|||++++.+.++.+.+.++++++++||++|... +.++..+++|++++++|.| +||||.++.+|
T Consensus 7 ~~~~~~~~~~~EEl~fRg~l~~~l~~~~~~~~a~~is~~~f~~~H~~~~~~~~~~~~~g~~~~~~~~~-t~sl~~~i~~H 85 (91)
T PF02517_consen 7 FLVMILIAPIAEELFFRGFLFNRLRRRFNPWFAILISSLLFALWHLPNGPQFIYAFLFGLLFGYLYLR-TGSLWAAIIAH 85 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-cCChHHHHHHH
Confidence 455567789999999999999999999888999999999999999954 4489999999999999999 68999999999
Q ss_pred hHHhh
Q 000293 1647 TGIMA 1651 (1712)
Q Consensus 1647 agWn~ 1651 (1712)
+.||+
T Consensus 86 ~~~n~ 90 (91)
T PF02517_consen 86 ALWNL 90 (91)
T ss_pred HHHHc
Confidence 99985
No 58
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.45 E-value=5.3e-12 Score=147.37 Aligned_cols=137 Identities=18% Similarity=0.214 Sum_probs=95.0
Q ss_pred CCcceEEEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC
Q 000293 182 GKLEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPL 261 (1712)
Q Consensus 182 p~v~YrRe~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~l 261 (1712)
-+++|..+.+.++++..+..--..+ +.....++|++||+++ +...|++.+ ..|++ .+.|+++|++|+|+|..
T Consensus 61 ~~v~~~~~~v~i~~~~~iw~~~~~~-----~~~~~~plVliHGyGA-g~g~f~~Nf-~~La~-~~~vyaiDllG~G~SSR 132 (365)
T KOG4409|consen 61 VPVPYSKKYVRIPNGIEIWTITVSN-----ESANKTPLVLIHGYGA-GLGLFFRNF-DDLAK-IRNVYAIDLLGFGRSSR 132 (365)
T ss_pred cCCCcceeeeecCCCceeEEEeecc-----cccCCCcEEEEeccch-hHHHHHHhh-hhhhh-cCceEEecccCCCCCCC
Confidence 4688999999988776553221111 2245789999999844 445566654 45545 79999999999999974
Q ss_pred CCCCCcccCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChh
Q 000293 262 TTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLE 329 (1712)
Q Consensus 262 tsprly~a~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~ 329 (1712)
+.-..-......-+.+-|+..+...+-.+..+|||||||.++..||-.+|+ +|..+++++ ||.+.
T Consensus 133 P~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPe--rV~kLiLvs-P~Gf~ 197 (365)
T KOG4409|consen 133 PKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPE--RVEKLILVS-PWGFP 197 (365)
T ss_pred CCCCCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChH--hhceEEEec-ccccc
Confidence 322111112223455566666677777899999999999999999999987 588887775 44443
No 59
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.43 E-value=9.4e-12 Score=172.97 Aligned_cols=240 Identities=13% Similarity=0.132 Sum_probs=128.3
Q ss_pred CCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCC-------CCccc-CcHHHHHHHHHHHHhhC
Q 000293 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTS-------RLFTA-ADSDDICTAIQFIGKAR 286 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsp-------rly~a-~~tdDL~aVLd~I~kry 286 (1712)
.+++|||+||+.+ +... |..++..+. .+|+|+++|+||||.|..... ..+.. ...+|+.++++++
T Consensus 1370 ~~~~vVllHG~~~-s~~~-w~~~~~~L~-~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l---- 1442 (1655)
T PLN02980 1370 EGSVVLFLHGFLG-TGED-WIPIMKAIS-GSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI---- 1442 (1655)
T ss_pred CCCeEEEECCCCC-CHHH-HHHHHHHHh-CCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh----
Confidence 3589999999854 4443 556676664 569999999999999864321 11211 1234455555544
Q ss_pred CCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhh-hccCchh--hHhHHHHHH-HHHHHHHhhhhhhhc
Q 000293 287 PWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEA-TRSSPHH--IALDEKLAN-GLIDILRSNKELFKG 362 (1712)
Q Consensus 287 P~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~-~~sl~~~--~ly~~~La~-~Lk~~L~~~~~lf~~ 362 (1712)
...+++++||||||.+++.++.++++ .+.+++++++....... ....... ......+.. .+..++.. ++..
T Consensus 1443 ~~~~v~LvGhSmGG~iAl~~A~~~P~--~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~---~~~~ 1517 (1655)
T PLN02980 1443 TPGKVTLVGYSMGARIALYMALRFSD--KIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLEN---WYSG 1517 (1655)
T ss_pred CCCCEEEEEECHHHHHHHHHHHhChH--hhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHH---hccH
Confidence 34689999999999999999998875 68899888754322110 0000000 000000000 00011110 0100
Q ss_pred cCCCCCHHHHhhhccHHHHHHHHhhhc--cchhcHHHHH------hhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHH
Q 000293 363 RAKGFDVEKALSAKSVRDFEKAISMVS--YGFEAIEDFY------SKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRS 433 (1712)
Q Consensus 363 ~~~~~Die~IlkaktlrEFDd~~t~~~--~Gf~sv~eYY------r~aS~~~~L~kIkVPtLII~G-DDp~VP~~aip~~ 433 (1712)
. . +... .....+...+.... .........+ +.......+.+|++|+|+|+| +|.++|. ....
T Consensus 1518 ~---~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~~--~a~~ 1588 (1655)
T PLN02980 1518 E---L-WKSL---RNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFKQ--IAQK 1588 (1655)
T ss_pred H---H-hhhh---ccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccHH--HHHH
Confidence 0 0 0000 00000111000000 0000001111 111223568999999999999 8877652 2222
Q ss_pred HHhcCCC------------eEEEEecCCCccccCCCCchhHHHHHHHHHHHHHHHhh
Q 000293 434 SIAENPF------------TSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVELG 478 (1712)
Q Consensus 434 la~~nPn------------v~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~~~ 478 (1712)
+.+..|+ +++++++++||..+.+ .+. .+.+.+.+||+..+..
T Consensus 1589 ~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE--~Pe-~f~~~I~~FL~~~~~~ 1642 (1655)
T PLN02980 1589 MYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLE--NPL-PVIRALRKFLTRLHNS 1642 (1655)
T ss_pred HHHHccccccccccccccceEEEEECCCCCchHHH--CHH-HHHHHHHHHHHhcccc
Confidence 3333343 5899999888877775 233 5889999999976643
No 60
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.43 E-value=3.6e-12 Score=160.64 Aligned_cols=133 Identities=17% Similarity=0.107 Sum_probs=100.3
Q ss_pred EEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChh---HHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCc
Q 000293 191 VNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIE---KRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLF 267 (1712)
Q Consensus 191 Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~---sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly 267 (1712)
|++.||..+..+++.|.. .+..|+||++||+.. ... .+.......++++||.|+++|+||+|.|.......
T Consensus 1 i~~~DG~~L~~~~~~P~~----~~~~P~Il~~~gyg~-~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~- 74 (550)
T TIGR00976 1 VPMRDGTRLAIDVYRPAG----GGPVPVILSRTPYGK-DAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLL- 74 (550)
T ss_pred CcCCCCCEEEEEEEecCC----CCCCCEEEEecCCCC-chhhccccccccHHHHHhCCcEEEEEeccccccCCCceEec-
Confidence 467899999988776531 235689999999743 221 12233456788999999999999999997543222
Q ss_pred ccCcHHHHHHHHHHHHhh-CCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhh
Q 000293 268 TAADSDDICTAIQFIGKA-RPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEA 331 (1712)
Q Consensus 268 ~a~~tdDL~aVLd~I~kr-yP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~ 331 (1712)
.....+|+.++|+++.++ +...+++++||||||.+++.++..++. .+++++..++..+....
T Consensus 75 ~~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~--~l~aiv~~~~~~d~~~~ 137 (550)
T TIGR00976 75 GSDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPP--ALRAIAPQEGVWDLYRD 137 (550)
T ss_pred CcccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCC--ceeEEeecCcccchhHh
Confidence 245679999999999875 234689999999999999999887654 68999988888877654
No 61
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.42 E-value=1.5e-12 Score=143.59 Aligned_cols=193 Identities=19% Similarity=0.188 Sum_probs=121.9
Q ss_pred HHHHHHhCCcEEEEEcCCCCCCCCCC----CCCCcccCcHHHHHHHHHHHHhhCC--CCcEEEEEecHHHHHHHHHHHHc
Q 000293 237 FVCEALRRGFFPVVMNPRGCGGSPLT----TSRLFTAADSDDICTAIQFIGKARP--WTTLMSVGWGYGANMLTKYLAEV 310 (1712)
Q Consensus 237 La~~Llq~GYrVVVfD~RGhGgS~lt----sprly~a~~tdDL~aVLd~I~kryP--~spLvLVGhSMGG~IaL~YLge~ 310 (1712)
....++++||.|+++|+||.++.... ....+.....+|+.++++++.+++. ..+++++|||+||.+++..+..+
T Consensus 6 ~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~ 85 (213)
T PF00326_consen 6 NAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQH 85 (213)
T ss_dssp HHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHT
T ss_pred HHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhccc
Confidence 45678899999999999999875211 1112223457899999999988753 46899999999999999988877
Q ss_pred CCCCCccEEEEecCCCChhhhhccCchhhHhHHHHHHHHHHHHHhhhhhhhccCCCCCHHHHhhhccHHHHHHHHhhhcc
Q 000293 311 GERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSY 390 (1712)
Q Consensus 311 ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~~La~~Lk~~L~~~~~lf~~~~~~~Die~IlkaktlrEFDd~~t~~~~ 390 (1712)
++ .++++++.++.+++......... +. . . ++... ..
T Consensus 86 ~~--~f~a~v~~~g~~d~~~~~~~~~~---~~----~--------~-----------------------~~~~~-~~--- 121 (213)
T PF00326_consen 86 PD--RFKAAVAGAGVSDLFSYYGTTDI---YT----K--------A-----------------------EYLEY-GD--- 121 (213)
T ss_dssp CC--GSSEEEEESE-SSTTCSBHHTCC---HH----H--------G-----------------------HHHHH-SS---
T ss_pred ce--eeeeeeccceecchhcccccccc---cc----c--------c-----------------------ccccc-Cc---
Confidence 65 68999999888876533211000 00 0 0 00000 00
Q ss_pred chhcHHHHHhhcCcchhcCc--CCccEEEEEe-CCCCCCCCChH---HHHHhcCCCeEEEEecCCCccccCCCCchhHHH
Q 000293 391 GFEAIEDFYSKSSTRSVVGN--IKIPVLFIQN-DAGAVPPFSIP---RSSIAENPFTSLLLCSCLPSSVIGGGRAAESWC 464 (1712)
Q Consensus 391 Gf~sv~eYYr~aS~~~~L~k--IkVPtLII~G-DDp~VP~~aip---~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv 464 (1712)
.+ ...+.|+..++...+.+ +++|+|++|| +|+.||+.... ..+.+....++++++++++|.+... ..... .
T Consensus 122 ~~-~~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~-~~~~~-~ 198 (213)
T PF00326_consen 122 PW-DNPEFYRELSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNP-ENRRD-W 198 (213)
T ss_dssp TT-TSHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSH-HHHHH-H
T ss_pred cc-hhhhhhhhhccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCc-hhHHH-H
Confidence 00 02233444455555666 8999999999 89999875322 2334455569999999999944332 22233 4
Q ss_pred HHHHHHHHHHHH
Q 000293 465 QNLVIEWLSAVE 476 (1712)
Q Consensus 465 ~r~VlEFL~av~ 476 (1712)
.+.+.+||+...
T Consensus 199 ~~~~~~f~~~~l 210 (213)
T PF00326_consen 199 YERILDFFDKYL 210 (213)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc
Confidence 678888988654
No 62
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.42 E-value=3.1e-12 Score=130.67 Aligned_cols=143 Identities=20% Similarity=0.246 Sum_probs=104.7
Q ss_pred EEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhh-CCCCcEEEEEe
Q 000293 218 TLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKA-RPWTTLMSVGW 296 (1712)
Q Consensus 218 tVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kr-yP~spLvLVGh 296 (1712)
+||++||+.+ +... +..++..++++||.|+++|+||+|.+. ..+++..+++.+.+. ....+++++||
T Consensus 1 ~vv~~HG~~~-~~~~-~~~~~~~l~~~G~~v~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~i~l~G~ 68 (145)
T PF12695_consen 1 VVVLLHGWGG-SRRD-YQPLAEALAEQGYAVVAFDYPGHGDSD----------GADAVERVLADIRAGYPDPDRIILIGH 68 (145)
T ss_dssp EEEEECTTTT-TTHH-HHHHHHHHHHTTEEEEEESCTTSTTSH----------HSHHHHHHHHHHHHHHCTCCEEEEEEE
T ss_pred CEEEECCCCC-CHHH-HHHHHHHHHHCCCEEEEEecCCCCccc----------hhHHHHHHHHHHHhhcCCCCcEEEEEE
Confidence 5899999744 4444 567899999999999999999999862 123778888877443 35579999999
Q ss_pred cHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhHhHHHHHHHHHHHHHhhhhhhhccCCCCCHHHHhhhc
Q 000293 297 GYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAK 376 (1712)
Q Consensus 297 SMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~~La~~Lk~~L~~~~~lf~~~~~~~Die~Ilkak 376 (1712)
||||.+++.++.+. .+++++|++++..+
T Consensus 69 S~Gg~~a~~~~~~~---~~v~~~v~~~~~~~------------------------------------------------- 96 (145)
T PF12695_consen 69 SMGGAIAANLAARN---PRVKAVVLLSPYPD------------------------------------------------- 96 (145)
T ss_dssp THHHHHHHHHHHHS---TTESEEEEESESSG-------------------------------------------------
T ss_pred ccCcHHHHHHhhhc---cceeEEEEecCccc-------------------------------------------------
Confidence 99999999999876 26999999876200
Q ss_pred cHHHHHHHHhhhccchhcHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCcc
Q 000293 377 SVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSS 452 (1712)
Q Consensus 377 tlrEFDd~~t~~~~Gf~sv~eYYr~aS~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~ 452 (1712)
...+..+++|+++++| +|+++|+........+.....++.++++++|+
T Consensus 97 ----------------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 ----------------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp ----------------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred ----------------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 0012234459999999 99999876554332233357899999999995
No 63
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.41 E-value=5.3e-12 Score=142.77 Aligned_cols=210 Identities=16% Similarity=0.060 Sum_probs=137.8
Q ss_pred EEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCCCCCccc
Q 000293 191 VNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALR-RGFFPVVMNPRGCGGSPLTTSRLFTA 269 (1712)
Q Consensus 191 Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq-~GYrVVVfD~RGhGgS~ltsprly~a 269 (1712)
+++.-|..+.--...++ ....++|+++||.... .. -+-.+...+.. -++.++.||++|+|.|..+....
T Consensus 40 ~~t~rgn~~~~~y~~~~-----~~~~~~lly~hGNa~D-lg-q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~--- 109 (258)
T KOG1552|consen 40 VKTSRGNEIVCMYVRPP-----EAAHPTLLYSHGNAAD-LG-QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSER--- 109 (258)
T ss_pred eecCCCCEEEEEEEcCc-----cccceEEEEcCCcccc-hH-HHHHHHHHHhhcccceEEEEecccccccCCCcccc---
Confidence 45556665554333332 1235899999996321 11 11122223322 48999999999999997654332
Q ss_pred CcHHHHHHHHHHHHhhC-CCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhHhHHHHHHH
Q 000293 270 ADSDDICTAIQFIGKAR-PWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANG 348 (1712)
Q Consensus 270 ~~tdDL~aVLd~I~kry-P~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~~La~~ 348 (1712)
...+|+.++.+++++++ +..+++++|+|||....+.+|++.+ +.|+|+.++-.+..+....
T Consensus 110 n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~----~~alVL~SPf~S~~rv~~~-------------- 171 (258)
T KOG1552|consen 110 NLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP----LAAVVLHSPFTSGMRVAFP-------------- 171 (258)
T ss_pred cchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC----cceEEEeccchhhhhhhcc--------------
Confidence 45689999999999999 5889999999999999999998864 7788887765544322100
Q ss_pred HHHHHHhhhhhhhccCCCCCHHHHhhhccHHHHHHHHhhhccchhcHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCC
Q 000293 349 LIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPP 427 (1712)
Q Consensus 349 Lk~~L~~~~~lf~~~~~~~Die~IlkaktlrEFDd~~t~~~~Gf~sv~eYYr~aS~~~~L~kIkVPtLII~G-DDp~VP~ 427 (1712)
+ . -++ .-||. ....+.+..|++|+|++|| +|+++|.
T Consensus 172 -------~------~-----------~~~-~~~d~------------------f~~i~kI~~i~~PVLiiHgtdDevv~~ 208 (258)
T KOG1552|consen 172 -------D------T-----------KTT-YCFDA------------------FPNIEKISKITCPVLIIHGTDDEVVDF 208 (258)
T ss_pred -------C------c-----------ceE-Eeecc------------------ccccCcceeccCCEEEEecccCceecc
Confidence 0 0 000 11111 1125778999999999999 9999998
Q ss_pred CChHHHHHhcCCC-eEEEEecCCCccccCCCCchhHHHHHHHHHHHHHHH
Q 000293 428 FSIPRSSIAENPF-TSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVE 476 (1712)
Q Consensus 428 ~aip~~la~~nPn-v~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~ 476 (1712)
.+-. ++.+..+. .+-.+..|++|+..+-. . .+...+.+|+..+.
T Consensus 209 sHg~-~Lye~~k~~~epl~v~g~gH~~~~~~---~-~yi~~l~~f~~~~~ 253 (258)
T KOG1552|consen 209 SHGK-ALYERCKEKVEPLWVKGAGHNDIELY---P-EYIEHLRRFISSVL 253 (258)
T ss_pred cccH-HHHHhccccCCCcEEecCCCcccccC---H-HHHHHHHHHHHHhc
Confidence 6543 23333333 46677888888777752 2 35678888887665
No 64
>PRK11071 esterase YqiA; Provisional
Probab=99.38 E-value=7.4e-12 Score=137.61 Aligned_cols=91 Identities=14% Similarity=0.003 Sum_probs=65.2
Q ss_pred cEEEEeCCCCCCChhHHH-HHHHHHHHh--CCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEE
Q 000293 217 TTLLLVPGTAEGSIEKRI-RLFVCEALR--RGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMS 293 (1712)
Q Consensus 217 PtVVLLHGltGGS~~sYi-r~La~~Llq--~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spLvL 293 (1712)
|+||++||+++ +...+. ..+...+.+ .+|+|+++|+|||+ +|+.+.+..+.++++..++++
T Consensus 2 p~illlHGf~s-s~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~---------------~~~~~~l~~l~~~~~~~~~~l 65 (190)
T PRK11071 2 STLLYLHGFNS-SPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP---------------ADAAELLESLVLEHGGDPLGL 65 (190)
T ss_pred CeEEEECCCCC-CcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH---------------HHHHHHHHHHHHHcCCCCeEE
Confidence 67999999854 554433 334455544 37999999999984 234444444444455678999
Q ss_pred EEecHHHHHHHHHHHHcCCCCCccEEEEecCCCCh
Q 000293 294 VGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDL 328 (1712)
Q Consensus 294 VGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl 328 (1712)
+||||||.+++.++.+++. .+|+++++.+.
T Consensus 66 vG~S~Gg~~a~~~a~~~~~-----~~vl~~~~~~~ 95 (190)
T PRK11071 66 VGSSLGGYYATWLSQCFML-----PAVVVNPAVRP 95 (190)
T ss_pred EEECHHHHHHHHHHHHcCC-----CEEEECCCCCH
Confidence 9999999999999998762 35778887663
No 65
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.36 E-value=1e-11 Score=143.56 Aligned_cols=131 Identities=14% Similarity=0.131 Sum_probs=93.6
Q ss_pred EEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCCh--hHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCc
Q 000293 190 CVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSI--EKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLF 267 (1712)
Q Consensus 190 ~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~--~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly 267 (1712)
+++.++|..+.+ |+.+. .....++||++||+.+... ...++.++..|.++||+|+++|+||||.|........
T Consensus 4 ~l~~~~g~~~~~-~~~p~----~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~ 78 (266)
T TIGR03101 4 FLDAPHGFRFCL-YHPPV----AVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAAR 78 (266)
T ss_pred EecCCCCcEEEE-EecCC----CCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCC
Confidence 456666665543 33331 1223578999999843221 2235667889999999999999999999964322211
Q ss_pred ccCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCCh
Q 000293 268 TAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDL 328 (1712)
Q Consensus 268 ~a~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl 328 (1712)
...+.+|+.++++++++. +..+++++||||||.+++.++.++++ .+.++|++++....
T Consensus 79 ~~~~~~Dv~~ai~~L~~~-~~~~v~LvG~SmGG~vAl~~A~~~p~--~v~~lVL~~P~~~g 136 (266)
T TIGR03101 79 WDVWKEDVAAAYRWLIEQ-GHPPVTLWGLRLGALLALDAANPLAA--KCNRLVLWQPVVSG 136 (266)
T ss_pred HHHHHHHHHHHHHHHHhc-CCCCEEEEEECHHHHHHHHHHHhCcc--ccceEEEeccccch
Confidence 123568999999999875 45799999999999999999988764 58888888766543
No 66
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.32 E-value=6.1e-11 Score=143.92 Aligned_cols=130 Identities=10% Similarity=0.032 Sum_probs=83.2
Q ss_pred EEcCCCc-----EEEEEecCCCcccccCCCCcEEEEeCCCCCCChh-----------HHHHHHHH---HHHhCCcEEEEE
Q 000293 191 VNTEDGG-----VISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIE-----------KRIRLFVC---EALRRGFFPVVM 251 (1712)
Q Consensus 191 Ltt~DGg-----~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~-----------sYir~La~---~Llq~GYrVVVf 251 (1712)
|++..|+ +++|..+...+ ....++||++|+++|.++. .||..++- .+=-..|.||++
T Consensus 30 f~l~~G~~l~~~~~~Y~t~G~ln----~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~ 105 (389)
T PRK06765 30 FTTEGGRTIPDVQMGYETYGTLN----RAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVIST 105 (389)
T ss_pred EEccCCCCcCCceEEEEeccccC----CCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEe
Confidence 5666665 44555443321 1235899999999875432 24554442 122346999999
Q ss_pred cCCCCCCCC-------------CCCCCCc----ccCcHHHHHHHHHHHHhhCCCCcEE-EEEecHHHHHHHHHHHHcCCC
Q 000293 252 NPRGCGGSP-------------LTTSRLF----TAADSDDICTAIQFIGKARPWTTLM-SVGWGYGANMLTKYLAEVGER 313 (1712)
Q Consensus 252 D~RGhGgS~-------------ltsprly----~a~~tdDL~aVLd~I~kryP~spLv-LVGhSMGG~IaL~YLge~ge~ 313 (1712)
|..|-|.|. ..+++.| ..-..+|+...+..+.+..+..++. +|||||||++++.++.++++
T Consensus 106 n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~- 184 (389)
T PRK06765 106 DTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPH- 184 (389)
T ss_pred cccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChH-
Confidence 999876421 0111111 1123566665555555556667775 99999999999999999987
Q ss_pred CCccEEEEecCCC
Q 000293 314 TPLTAVTCIDNPF 326 (1712)
Q Consensus 314 s~V~AaVlIS~P~ 326 (1712)
.+.++|++++..
T Consensus 185 -~v~~lv~ia~~~ 196 (389)
T PRK06765 185 -MVERMIGVIGNP 196 (389)
T ss_pred -hhheEEEEecCC
Confidence 689999987654
No 67
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.30 E-value=1.6e-11 Score=153.59 Aligned_cols=109 Identities=19% Similarity=0.256 Sum_probs=82.2
Q ss_pred CCcEEEEeCCCCCCChhHHH------HHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcH-HHHHHHHHHHHhhCC
Q 000293 215 LDTTLLLVPGTAEGSIEKRI------RLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADS-DDICTAIQFIGKARP 287 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYi------r~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~t-dDL~aVLd~I~kryP 287 (1712)
.+++|||+||+.. ..|+ +.++.+|+++||+|+++|+||+|.+..... + ..+. +++.++|+++.+..+
T Consensus 187 ~~~PlLiVp~~i~---k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~--~-ddY~~~~i~~al~~v~~~~g 260 (532)
T TIGR01838 187 HKTPLLIVPPWIN---KYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKT--F-DDYIRDGVIAALEVVEAITG 260 (532)
T ss_pred CCCcEEEECcccc---cceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCC--h-hhhHHHHHHHHHHHHHHhcC
Confidence 4689999999743 3343 379999999999999999999998742211 1 1233 568889999988778
Q ss_pred CCcEEEEEecHHHHHHHH----HHHHcCCCCCccEEEEecCCCChhh
Q 000293 288 WTTLMSVGWGYGANMLTK----YLAEVGERTPLTAVTCIDNPFDLEE 330 (1712)
Q Consensus 288 ~spLvLVGhSMGG~IaL~----YLge~ge~s~V~AaVlIS~P~Dl~e 330 (1712)
..+++++||||||.++.. |++.. .+.+++++++++++.|+..
T Consensus 261 ~~kv~lvG~cmGGtl~a~ala~~aa~~-~~~rv~slvll~t~~Df~~ 306 (532)
T TIGR01838 261 EKQVNCVGYCIGGTLLSTALAYLAARG-DDKRIKSATFFTTLLDFSD 306 (532)
T ss_pred CCCeEEEEECcCcHHHHHHHHHHHHhC-CCCccceEEEEecCcCCCC
Confidence 889999999999998632 34443 2236999999999988764
No 68
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.27 E-value=1.5e-11 Score=133.68 Aligned_cols=228 Identities=14% Similarity=0.105 Sum_probs=133.6
Q ss_pred cEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEEEEe
Q 000293 217 TTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGW 296 (1712)
Q Consensus 217 PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spLvLVGh 296 (1712)
..|++++|..|.+...|-..+....-..-+.+|++|.||+|.|..+..++--.....|...+++-++.. ...++.++||
T Consensus 43 ~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aL-k~~~fsvlGW 121 (277)
T KOG2984|consen 43 NYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEAL-KLEPFSVLGW 121 (277)
T ss_pred ceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHh-CCCCeeEeee
Confidence 469999998765544442222222222339999999999999965544332222346666666655432 2368999999
Q ss_pred cHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhHhHHHHHHHHHHHHHhhhhhhhccCCCCCHHHHhhhc
Q 000293 297 GYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAK 376 (1712)
Q Consensus 297 SMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~~La~~Lk~~L~~~~~lf~~~~~~~Die~Ilkak 376 (1712)
|-||..++..|+.+++ .|...+++++...+..... +..+++++. .+..+.. + . .+++.....
T Consensus 122 SdGgiTalivAak~~e--~v~rmiiwga~ayvn~~~~----------ma~kgiRdv-~kWs~r~--R-~--P~e~~Yg~e 183 (277)
T KOG2984|consen 122 SDGGITALIVAAKGKE--KVNRMIIWGAAAYVNHLGA----------MAFKGIRDV-NKWSARG--R-Q--PYEDHYGPE 183 (277)
T ss_pred cCCCeEEEEeeccChh--hhhhheeecccceecchhH----------HHHhchHHH-hhhhhhh--c-c--hHHHhcCHH
Confidence 9999999999988765 5777777765443322110 011111111 0000000 0 0 000011101
Q ss_pred cHHHHHHHHhhhccchhc-HHHHHhhcC---cchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCc
Q 000293 377 SVRDFEKAISMVSYGFEA-IEDFYSKSS---TRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPS 451 (1712)
Q Consensus 377 tlrEFDd~~t~~~~Gf~s-v~eYYr~aS---~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH 451 (1712)
+++. ....|-+ +..+|...+ ++..+++|+||+|++|| .||+++...++.. ...-+.+++.+.+.|+|
T Consensus 184 ~f~~-------~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi-~~~~~~a~~~~~peGkH 255 (277)
T KOG2984|consen 184 TFRT-------QWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFI-PVLKSLAKVEIHPEGKH 255 (277)
T ss_pred HHHH-------HHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccch-hhhcccceEEEccCCCc
Confidence 1110 0001111 222222211 55679999999999999 9999987666543 34568899999998888
Q ss_pred cccCCCCchhHHHHHHHHHHHHH
Q 000293 452 SVIGGGRAAESWCQNLVIEWLSA 474 (1712)
Q Consensus 452 ~gF~e~~~~~sWv~r~VlEFL~a 474 (1712)
-+.... ..||++.+.+||+.
T Consensus 256 n~hLry---a~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 256 NFHLRY---AKEFNKLVLDFLKS 275 (277)
T ss_pred ceeeec---hHHHHHHHHHHHhc
Confidence 777642 55899999999974
No 69
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.26 E-value=5.7e-11 Score=130.30 Aligned_cols=230 Identities=16% Similarity=0.195 Sum_probs=148.4
Q ss_pred cCCcceEEEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCC
Q 000293 181 EGKLEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSP 260 (1712)
Q Consensus 181 ~p~v~YrRe~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ 260 (1712)
...++|+|..+.++|..++...|... ....|+++++||-+| .+...+.-.--...+.+..|+.+++||+|.|.
T Consensus 49 ~~n~pye~i~l~T~D~vtL~a~~~~~------E~S~pTlLyfh~NAG-NmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~ 121 (300)
T KOG4391|consen 49 EFNMPYERIELRTRDKVTLDAYLMLS------ESSRPTLLYFHANAG-NMGHRLPIARVFYVNLKMNVLIVSYRGYGKSE 121 (300)
T ss_pred ccCCCceEEEEEcCcceeEeeeeecc------cCCCceEEEEccCCC-cccchhhHHHHHHHHcCceEEEEEeeccccCC
Confidence 34689999999999999888767652 226799999999754 54433332222446678999999999999996
Q ss_pred CCCCCCcccCcHHHHHHHHHHHHhhC--CCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCC-ChhhhhccCch
Q 000293 261 LTTSRLFTAADSDDICTAIQFIGKAR--PWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPF-DLEEATRSSPH 337 (1712)
Q Consensus 261 ltsprly~a~~tdDL~aVLd~I~kry--P~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~-Dl~e~~~sl~~ 337 (1712)
... ...+..-|.+++|+|+..+. ...++++.|-|+||.+++..+++..+ ++.|+++ .+.| .+......+
T Consensus 122 Gsp---sE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~--ri~~~iv-ENTF~SIp~~~i~~-- 193 (300)
T KOG4391|consen 122 GSP---SEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD--RISAIIV-ENTFLSIPHMAIPL-- 193 (300)
T ss_pred CCc---cccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchh--heeeeee-echhccchhhhhhe--
Confidence 432 23455568999999998764 35689999999999999988887654 5665543 3332 221111100
Q ss_pred hhHhHHHHHHHHHHHHHhhhhhhhccCCCCCHHHHhhhccHHHHHHHHhhhccchhcHHHHHhhcCcchhcCcCCccEEE
Q 000293 338 HIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLF 417 (1712)
Q Consensus 338 ~~ly~~~La~~Lk~~L~~~~~lf~~~~~~~Die~IlkaktlrEFDd~~t~~~~Gf~sv~eYYr~aS~~~~L~kIkVPtLI 417 (1712)
+|+ +-. +.+.. +-|++ .......+++-++|.|+
T Consensus 194 ---------------------v~p-----~~~------k~i~~---------lc~kn------~~~S~~ki~~~~~P~LF 226 (300)
T KOG4391|consen 194 ---------------------VFP-----FPM------KYIPL---------LCYKN------KWLSYRKIGQCRMPFLF 226 (300)
T ss_pred ---------------------ecc-----chh------hHHHH---------HHHHh------hhcchhhhccccCceEE
Confidence 000 000 00000 00100 01122446677899999
Q ss_pred EEe-CCCCCCCCChHHHHHhcCC--CeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHHHh
Q 000293 418 IQN-DAGAVPPFSIPRSSIAENP--FTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVEL 477 (1712)
Q Consensus 418 I~G-DDp~VP~~aip~~la~~nP--nv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~~ 477 (1712)
|.| .|.+|||..+.. +...+| ..++..+|+|.|...+- .... .+.+.+||..+..
T Consensus 227 iSGlkDelVPP~~Mr~-Ly~~c~S~~Krl~eFP~gtHNDT~i--~dGY--fq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 227 ISGLKDELVPPVMMRQ-LYELCPSRTKRLAEFPDGTHNDTWI--CDGY--FQAIEDFLAEVVK 284 (300)
T ss_pred eecCccccCCcHHHHH-HHHhCchhhhhheeCCCCccCceEE--eccH--HHHHHHHHHHhcc
Confidence 999 999999976543 334444 56788999888854432 1233 3789999987764
No 70
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.25 E-value=1.3e-10 Score=155.70 Aligned_cols=251 Identities=16% Similarity=0.148 Sum_probs=131.4
Q ss_pred CCcEEEEeCCCCCCChhHHH----HHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHH---HHHHHHHhhCC
Q 000293 215 LDTTLLLVPGTAEGSIEKRI----RLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDIC---TAIQFIGKARP 287 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYi----r~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~---aVLd~I~kryP 287 (1712)
.+++|||+||+.. +...|- +.++..|.++||+|+++|+ |.+.... ..+.....+++. ++++.++...
T Consensus 66 ~~~plllvhg~~~-~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~-~~~~~~l~~~i~~l~~~l~~v~~~~- 139 (994)
T PRK07868 66 VGPPVLMVHPMMM-SADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVE-GGMERNLADHVVALSEAIDTVKDVT- 139 (994)
T ss_pred CCCcEEEECCCCC-CccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhH-cCccCCHHHHHHHHHHHHHHHHHhh-
Confidence 4689999999843 332221 1247889999999999996 4443221 112222334444 4444443333
Q ss_pred CCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhc-cCchh-----------hHhH-----H-------
Q 000293 288 WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATR-SSPHH-----------IALD-----E------- 343 (1712)
Q Consensus 288 ~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~-sl~~~-----------~ly~-----~------- 343 (1712)
..+++++||||||.+++.|++.+++ .+|.+++++++|+|+..... .++.. .+.. .
T Consensus 140 ~~~v~lvG~s~GG~~a~~~aa~~~~-~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 218 (994)
T PRK07868 140 GRDVHLVGYSQGGMFCYQAAAYRRS-KDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGF 218 (994)
T ss_pred CCceEEEEEChhHHHHHHHHHhcCC-CccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHH
Confidence 3579999999999999999986543 36899999999977642210 00000 0000 0
Q ss_pred HHHHHHHHHHHhhhhhhhccCCCCCHHHHhhhccHHHHHHHHhh-hccc--hhc-HHHHHhhcCc----------chhcC
Q 000293 344 KLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISM-VSYG--FEA-IEDFYSKSST----------RSVVG 409 (1712)
Q Consensus 344 ~La~~Lk~~L~~~~~lf~~~~~~~Die~IlkaktlrEFDd~~t~-~~~G--f~s-v~eYYr~aS~----------~~~L~ 409 (1712)
.+...+. .+.....++... .+.+........++|-....- ...| +.. ...+|..... ...+.
T Consensus 219 ~~l~p~~-~~~~~~~~~~~l---~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~ 294 (994)
T PRK07868 219 QMLDPVK-TAKARVDFLRQL---HDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLA 294 (994)
T ss_pred HhcChhH-HHHHHHHHHHhc---CchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchh
Confidence 0000000 011111111100 000000000001111100000 0001 111 2233322111 12488
Q ss_pred cCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEE-EEecCCCccccCCCCchhHHHHHHHHHHHHHHHh
Q 000293 410 NIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSL-LLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVEL 477 (1712)
Q Consensus 410 kIkVPtLII~G-DDp~VP~~aip~~la~~nPnv~L-vLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~~ 477 (1712)
+|++|+|+|+| +|+++|+..... ..+..|+..+ .+++++||.++..+.....-+...+.+||...+.
T Consensus 295 ~i~~P~L~i~G~~D~ivp~~~~~~-l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 295 DITCPVLAFVGEVDDIGQPASVRG-IRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEG 363 (994)
T ss_pred hCCCCEEEEEeCCCCCCCHHHHHH-HHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhcc
Confidence 99999999999 999999865443 3456788887 5667766666655444333344789999987653
No 71
>PRK10115 protease 2; Provisional
Probab=99.23 E-value=3e-10 Score=146.69 Aligned_cols=223 Identities=16% Similarity=0.131 Sum_probs=148.7
Q ss_pred ceEEEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC-
Q 000293 185 EYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTT- 263 (1712)
Q Consensus 185 ~YrRe~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~lts- 263 (1712)
..++..++..||..|.+.+..+++.. ..+..|+||++||..+.+....+......++++||.|+..|.||-|+-...-
T Consensus 415 ~~e~v~~~s~DG~~Ip~~l~~~~~~~-~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~ 493 (686)
T PRK10115 415 RSEHLWITARDGVEVPVSLVYHRKHF-RKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWY 493 (686)
T ss_pred EEEEEEEECCCCCEEEEEEEEECCCC-CCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHH
Confidence 34556678899999887544332211 2345699999999887766555555566789999999999999988764211
Q ss_pred ---CCCcccCcHHHHHHHHHHHHhhC--CCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhc--cCc
Q 000293 264 ---SRLFTAADSDDICTAIQFIGKAR--PWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATR--SSP 336 (1712)
Q Consensus 264 ---prly~a~~tdDL~aVLd~I~kry--P~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~--sl~ 336 (1712)
.........+|+.++++++.++. ...++.+.|.|.||.++...+.++++ .++|+|+..+..|+...+. .++
T Consensus 494 ~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pd--lf~A~v~~vp~~D~~~~~~~~~~p 571 (686)
T PRK10115 494 EDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPE--LFHGVIAQVPFVDVVTTMLDESIP 571 (686)
T ss_pred HhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChh--heeEEEecCCchhHhhhcccCCCC
Confidence 01111245789999999997663 24589999999999999988888775 6888988888877754321 110
Q ss_pred hhhHhHHHHHHHHHHHHHhhhhhhhccCCCCCHHHHhhhccHHHHHHHHhhhccchh---cHHHHHhhcCcchhcCcCCc
Q 000293 337 HHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFE---AIEDFYSKSSTRSVVGNIKI 413 (1712)
Q Consensus 337 ~~~ly~~~La~~Lk~~L~~~~~lf~~~~~~~Die~IlkaktlrEFDd~~t~~~~Gf~---sv~eYYr~aS~~~~L~kIkV 413 (1712)
. +..++++ +|.+ ...+|++..|+...+.+++.
T Consensus 572 ~---------------------------------------~~~~~~e------~G~p~~~~~~~~l~~~SP~~~v~~~~~ 606 (686)
T PRK10115 572 L---------------------------------------TTGEFEE------WGNPQDPQYYEYMKSYSPYDNVTAQAY 606 (686)
T ss_pred C---------------------------------------ChhHHHH------hCCCCCHHHHHHHHHcCchhccCccCC
Confidence 0 0001111 1211 13456777899999999999
Q ss_pred c-EEEEEe-CCCCCCCCChH---HHHHhcCCCeEEEEe---cCCCccccC
Q 000293 414 P-VLFIQN-DAGAVPPFSIP---RSSIAENPFTSLLLC---SCLPSSVIG 455 (1712)
Q Consensus 414 P-tLII~G-DDp~VP~~aip---~~la~~nPnv~LvLt---~gGHH~gF~ 455 (1712)
| +|+++| +|+-||+.... ..+.+......++++ +++||.+-.
T Consensus 607 P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~~ 656 (686)
T PRK10115 607 PHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKS 656 (686)
T ss_pred CceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCc
Confidence 9 567799 89988875422 122223334566666 788997433
No 72
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.19 E-value=1.5e-10 Score=128.51 Aligned_cols=183 Identities=13% Similarity=0.142 Sum_probs=113.9
Q ss_pred CCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCC-CCCCCCC---Ccc-------cCcHHHHHHHHHHH
Q 000293 214 GLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGG-SPLTTSR---LFT-------AADSDDICTAIQFI 282 (1712)
Q Consensus 214 ~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGg-S~ltspr---ly~-------a~~tdDL~aVLd~I 282 (1712)
+..|.||++|++.| -. .+++.++..++++||.|+++|+-+-.. .+..... .+. .....|+.++++++
T Consensus 12 ~~~~~Vvv~~d~~G-~~-~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l 89 (218)
T PF01738_consen 12 GPRPAVVVIHDIFG-LN-PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYL 89 (218)
T ss_dssp SSEEEEEEE-BTTB-S--HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCC-Cc-hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 35789999999854 33 678889999999999999999755444 1111111 110 11247888999999
Q ss_pred HhhC--CCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhHhHHHHHHHHHHHHHhhhhhh
Q 000293 283 GKAR--PWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELF 360 (1712)
Q Consensus 283 ~kry--P~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~~La~~Lk~~L~~~~~lf 360 (1712)
+.+. ...++.++|||+||.+++.++.+. ..++++++..++....
T Consensus 90 ~~~~~~~~~kig~vGfc~GG~~a~~~a~~~---~~~~a~v~~yg~~~~~------------------------------- 135 (218)
T PF01738_consen 90 RAQPEVDPGKIGVVGFCWGGKLALLLAARD---PRVDAAVSFYGGSPPP------------------------------- 135 (218)
T ss_dssp HCTTTCEEEEEEEEEETHHHHHHHHHHCCT---TTSSEEEEES-SSSGG-------------------------------
T ss_pred HhccccCCCcEEEEEEecchHHhhhhhhhc---cccceEEEEcCCCCCC-------------------------------
Confidence 8765 356999999999999999877654 2588888764410000
Q ss_pred hccCCCCCHHHHhhhccHHHHHHHHhhhccchhcHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCCh---HHHHHh
Q 000293 361 KGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSI---PRSSIA 436 (1712)
Q Consensus 361 ~~~~~~~Die~IlkaktlrEFDd~~t~~~~Gf~sv~eYYr~aS~~~~L~kIkVPtLII~G-DDp~VP~~ai---p~~la~ 436 (1712)
.......++++|+|+++| +|+.+|.+.+ ...+.+
T Consensus 136 ------------------------------------------~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~ 173 (218)
T PF01738_consen 136 ------------------------------------------PPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKA 173 (218)
T ss_dssp ------------------------------------------GHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHC
T ss_pred ------------------------------------------cchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHh
Confidence 000123467899999999 9999987643 223334
Q ss_pred cCCCeEEEEecCCCccccCCCCc-----hhHHHHHHHHHHHHH
Q 000293 437 ENPFTSLLLCSCLPSSVIGGGRA-----AESWCQNLVIEWLSA 474 (1712)
Q Consensus 437 ~nPnv~LvLt~gGHH~gF~e~~~-----~~sWv~r~VlEFL~a 474 (1712)
....+++.++++++|+|...... ...-..+.+.+||++
T Consensus 174 ~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~ 216 (218)
T PF01738_consen 174 AGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKR 216 (218)
T ss_dssp TTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC
T ss_pred cCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHh
Confidence 56789999999999988876532 111123667777754
No 73
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.18 E-value=2e-10 Score=126.36 Aligned_cols=208 Identities=13% Similarity=0.178 Sum_probs=128.5
Q ss_pred CCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC-CCCcccCcHHHHHHHHHHHHhhCCCCcEE
Q 000293 214 GLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTT-SRLFTAADSDDICTAIQFIGKARPWTTLM 292 (1712)
Q Consensus 214 ~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~lts-prly~a~~tdDL~aVLd~I~kryP~spLv 292 (1712)
+...+||+|||+-..-...|+..++.++.+.||-++.||+||.|.|.... +..|. ...+|+..+++|+....- .--+
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~-~eadDL~sV~q~~s~~nr-~v~v 108 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYN-TEADDLHSVIQYFSNSNR-VVPV 108 (269)
T ss_pred CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCccc-chHHHHHHHHHHhccCce-EEEE
Confidence 44578999999854444558888999999999999999999999997432 22222 235999999999976321 1126
Q ss_pred EEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhHhHHHHHHHHHHHHHhh-hhhhhccCCCCCHHH
Q 000293 293 SVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSN-KELFKGRAKGFDVEK 371 (1712)
Q Consensus 293 LVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~~La~~Lk~~L~~~-~~lf~~~~~~~Die~ 371 (1712)
++|||=||.+++.|+..+.+ +.-++-++.-++....... .+.+....++... ..-.++....+..
T Consensus 109 i~gHSkGg~Vvl~ya~K~~d---~~~viNcsGRydl~~~I~e---------Rlg~~~l~~ike~Gfid~~~rkG~y~~-- 174 (269)
T KOG4667|consen 109 ILGHSKGGDVVLLYASKYHD---IRNVINCSGRYDLKNGINE---------RLGEDYLERIKEQGFIDVGPRKGKYGY-- 174 (269)
T ss_pred EEeecCccHHHHHHHHhhcC---chheEEcccccchhcchhh---------hhcccHHHHHHhCCceecCcccCCcCc--
Confidence 89999999999999999865 4555666666666543210 0111101111110 0000000000000
Q ss_pred HhhhccHHHHHHHHhhhccchhcHHHHHhhcCcchhcC--cCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecC
Q 000293 372 ALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVG--NIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSC 448 (1712)
Q Consensus 372 IlkaktlrEFDd~~t~~~~Gf~sv~eYYr~aS~~~~L~--kIkVPtLII~G-DDp~VP~~aip~~la~~nPnv~LvLt~g 448 (1712)
. .+.....+.+. ..+..... .++||+|-+|| .|.+||.+... ..++..|+-.|.+++|
T Consensus 175 r---vt~eSlmdrLn---------------td~h~aclkId~~C~VLTvhGs~D~IVPve~Ak-efAk~i~nH~L~iIEg 235 (269)
T KOG4667|consen 175 R---VTEESLMDRLN---------------TDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAK-EFAKIIPNHKLEIIEG 235 (269)
T ss_pred e---ecHHHHHHHHh---------------chhhhhhcCcCccCceEEEeccCCceeechhHH-HHHHhccCCceEEecC
Confidence 0 00000111111 11222222 34799999999 99999987654 4567899999999999
Q ss_pred CCccccCC
Q 000293 449 LPSSVIGG 456 (1712)
Q Consensus 449 GHH~gF~e 456 (1712)
+.|++...
T Consensus 236 ADHnyt~~ 243 (269)
T KOG4667|consen 236 ADHNYTGH 243 (269)
T ss_pred CCcCccch
Confidence 99987764
No 74
>PLN02442 S-formylglutathione hydrolase
Probab=99.18 E-value=1.6e-09 Score=126.19 Aligned_cols=190 Identities=12% Similarity=0.047 Sum_probs=109.4
Q ss_pred CCcEEEEeCCCCCCChhHHH--HHHHHHHHhCCcEEEEEcCCCCCCC-CCC--------CCCCc-----------c--cC
Q 000293 215 LDTTLLLVPGTAEGSIEKRI--RLFVCEALRRGFFPVVMNPRGCGGS-PLT--------TSRLF-----------T--AA 270 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYi--r~La~~Llq~GYrVVVfD~RGhGgS-~lt--------sprly-----------~--a~ 270 (1712)
..|+|+++||+.+ +...+. ..+...+...||.||++|.+++|.- ... ....| . ..
T Consensus 46 ~~Pvv~~lHG~~~-~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (283)
T PLN02442 46 KVPVLYWLSGLTC-TDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDY 124 (283)
T ss_pred CCCEEEEecCCCc-ChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhh
Confidence 4699999999754 444432 2234556678999999998876610 000 00011 0 00
Q ss_pred cHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhHhHHHHHHHHH
Q 000293 271 DSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLI 350 (1712)
Q Consensus 271 ~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~~La~~Lk 350 (1712)
..+++...++.........+++++||||||.+++.++.++++ .+.+++++++..+..... +. ...
T Consensus 125 ~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~--~~~~~~~~~~~~~~~~~~----~~-------~~~-- 189 (283)
T PLN02442 125 VVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPD--KYKSVSAFAPIANPINCP----WG-------QKA-- 189 (283)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCch--hEEEEEEECCccCcccCc----hh-------hHH--
Confidence 134444444443222345689999999999999999998865 688888888876643110 00 000
Q ss_pred HHHHhhhhhhhccCCCCCHHHHhhhccHHHHHHHHhhhccchhcHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCC-
Q 000293 351 DILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPF- 428 (1712)
Q Consensus 351 ~~L~~~~~lf~~~~~~~Die~IlkaktlrEFDd~~t~~~~Gf~sv~eYYr~aS~~~~L~kIkVPtLII~G-DDp~VP~~- 428 (1712)
+.. .+.. +. ..+ .+ |...+....+..+++|+|++|| +|+++|..
T Consensus 190 --~~~---~~g~-----~~---------~~~--------------~~-~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~ 235 (283)
T PLN02442 190 --FTN---YLGS-----DK---------ADW--------------EE-YDATELVSKFNDVSATILIDQGEADKFLKEQL 235 (283)
T ss_pred --HHH---HcCC-----Ch---------hhH--------------HH-cChhhhhhhccccCCCEEEEECCCCccccccc
Confidence 000 0100 00 000 00 1122233445567899999999 88888863
Q ss_pred -C--hHHHHHhcCCCeEEEEecCCCcccc
Q 000293 429 -S--IPRSSIAENPFTSLLLCSCLPSSVI 454 (1712)
Q Consensus 429 -a--ip~~la~~nPnv~LvLt~gGHH~gF 454 (1712)
. +...+.+...++++.++++++|.+.
T Consensus 236 ~s~~~~~~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 236 LPENFEEACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred cHHHHHHHHHHcCCCeEEEEeCCCCccHH
Confidence 1 2222233445689999999999654
No 75
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.17 E-value=5.1e-10 Score=121.92 Aligned_cols=175 Identities=16% Similarity=0.202 Sum_probs=124.1
Q ss_pred CCCcEEEEeCC--CCCCChhH-HHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCc
Q 000293 214 GLDTTLLLVPG--TAEGSIEK-RIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTT 290 (1712)
Q Consensus 214 ~~~PtVVLLHG--ltGGS~~s-Yir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~sp 290 (1712)
...|..|+||- +.||++.. -+..++..+.++||.|+.||+||.|+|...- -...+..+|..++++|++.++|..+
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~f--D~GiGE~~Da~aaldW~~~~hp~s~ 103 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEF--DNGIGELEDAAAALDWLQARHPDSA 103 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcc--cCCcchHHHHHHHHHHHHhhCCCch
Confidence 35688888874 33556554 4677888999999999999999999997542 2235678999999999999999888
Q ss_pred E-EEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhHhHHHHHHHHHHHHHhhhhhhhccCCCCCH
Q 000293 291 L-MSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRAKGFDV 369 (1712)
Q Consensus 291 L-vLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~~La~~Lk~~L~~~~~lf~~~~~~~Di 369 (1712)
. .+.|||+||.|+++.+.+.++ ....+.++++.+..
T Consensus 104 ~~~l~GfSFGa~Ia~~la~r~~e---~~~~is~~p~~~~~---------------------------------------- 140 (210)
T COG2945 104 SCWLAGFSFGAYIAMQLAMRRPE---ILVFISILPPINAY---------------------------------------- 140 (210)
T ss_pred hhhhcccchHHHHHHHHHHhccc---ccceeeccCCCCch----------------------------------------
Confidence 7 789999999999999988765 33444444443310
Q ss_pred HHHhhhccHHHHHHHHhhhccchhcHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecC
Q 000293 370 EKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSC 448 (1712)
Q Consensus 370 e~IlkaktlrEFDd~~t~~~~Gf~sv~eYYr~aS~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~nPnv~LvLt~g 448 (1712)
| + ..+.-..+|.|+|+| .|+++++... ....+ .-...++..++
T Consensus 141 ------------d---------------f-------s~l~P~P~~~lvi~g~~Ddvv~l~~~-l~~~~-~~~~~~i~i~~ 184 (210)
T COG2945 141 ------------D---------------F-------SFLAPCPSPGLVIQGDADDVVDLVAV-LKWQE-SIKITVITIPG 184 (210)
T ss_pred ------------h---------------h-------hhccCCCCCceeEecChhhhhcHHHH-HHhhc-CCCCceEEecC
Confidence 0 0 113345689999999 8888876432 22223 34457788899
Q ss_pred CCccccCCCCchhHHHHHHHHHHHH
Q 000293 449 LPSSVIGGGRAAESWCQNLVIEWLS 473 (1712)
Q Consensus 449 GHH~gF~e~~~~~sWv~r~VlEFL~ 473 (1712)
+.|.+... ...+.+.+.+||.
T Consensus 185 a~HFF~gK----l~~l~~~i~~~l~ 205 (210)
T COG2945 185 ADHFFHGK----LIELRDTIADFLE 205 (210)
T ss_pred CCceeccc----HHHHHHHHHHHhh
Confidence 99955443 2246678888884
No 76
>PLN00021 chlorophyllase
Probab=99.17 E-value=7.6e-10 Score=130.91 Aligned_cols=104 Identities=14% Similarity=0.133 Sum_probs=75.6
Q ss_pred CCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhC-------
Q 000293 214 GLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKAR------- 286 (1712)
Q Consensus 214 ~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kry------- 286 (1712)
+..|+||++||+.+ .. .++..++.+++++||.|+++|++|++... .....+|..++++++....
T Consensus 50 g~~PvVv~lHG~~~-~~-~~y~~l~~~Las~G~~VvapD~~g~~~~~-------~~~~i~d~~~~~~~l~~~l~~~l~~~ 120 (313)
T PLN00021 50 GTYPVLLFLHGYLL-YN-SFYSQLLQHIASHGFIVVAPQLYTLAGPD-------GTDEIKDAAAVINWLSSGLAAVLPEG 120 (313)
T ss_pred CCCCEEEEECCCCC-Cc-ccHHHHHHHHHhCCCEEEEecCCCcCCCC-------chhhHHHHHHHHHHHHhhhhhhcccc
Confidence 45799999999843 33 34566888999999999999999975431 1223466777777776421
Q ss_pred ---CCCcEEEEEecHHHHHHHHHHHHcCCC---CCccEEEEecCCC
Q 000293 287 ---PWTTLMSVGWGYGANMLTKYLAEVGER---TPLTAVTCIDNPF 326 (1712)
Q Consensus 287 ---P~spLvLVGhSMGG~IaL~YLge~ge~---s~V~AaVlIS~P~ 326 (1712)
...+++++||||||.+++.++..+++. .++.+++.+++..
T Consensus 121 ~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 121 VRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred cccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 125799999999999999999887542 2577777775543
No 77
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.12 E-value=4.5e-09 Score=121.50 Aligned_cols=111 Identities=13% Similarity=0.037 Sum_probs=69.2
Q ss_pred CCcEEEEeCCCCCCChhHHHH-H-HHHHHHhCCcEEEEEcC--CCCCCCCCCC-------CCCc----------ccCcHH
Q 000293 215 LDTTLLLVPGTAEGSIEKRIR-L-FVCEALRRGFFPVVMNP--RGCGGSPLTT-------SRLF----------TAADSD 273 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYir-~-La~~Llq~GYrVVVfD~--RGhGgS~lts-------prly----------~a~~td 273 (1712)
..|+|+++||+. ++...|.. . +...+.+.||.||++|. ||+|.+.... ...| .....+
T Consensus 41 ~~P~vvllHG~~-~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~ 119 (275)
T TIGR02821 41 PVPVLWYLSGLT-CTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYS 119 (275)
T ss_pred CCCEEEEccCCC-CCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHH
Confidence 369999999974 44444422 2 22344567999999997 7776432110 0011 001122
Q ss_pred HH-HHHHHHHHhhCC--CCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCCh
Q 000293 274 DI-CTAIQFIGKARP--WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDL 328 (1712)
Q Consensus 274 DL-~aVLd~I~kryP--~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl 328 (1712)
.+ .++...+...++ ..+++++||||||.+++.++.++++ .+.+++++++..+.
T Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~--~~~~~~~~~~~~~~ 175 (275)
T TIGR02821 120 YIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPD--RFKSVSAFAPIVAP 175 (275)
T ss_pred HHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcc--cceEEEEECCccCc
Confidence 22 233333444343 3589999999999999999998876 57888888877654
No 78
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.11 E-value=6.9e-10 Score=127.91 Aligned_cols=130 Identities=22% Similarity=0.229 Sum_probs=88.3
Q ss_pred CCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChh-HHHH-HHH------HHHHhCCcEEEEEcCCCCCCCCCCCCCC
Q 000293 195 DGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIE-KRIR-LFV------CEALRRGFFPVVMNPRGCGGSPLTTSRL 266 (1712)
Q Consensus 195 DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~-sYir-~La------~~Llq~GYrVVVfD~RGhGgS~ltsprl 266 (1712)
||..|+.|.+.| . ....+..|+||..|++..+... .... ... ..++++||.||+.|.||+|.|.......
T Consensus 1 DGv~L~adv~~P-~-~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~ 78 (272)
T PF02129_consen 1 DGVRLAADVYRP-G-ADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM 78 (272)
T ss_dssp TS-EEEEEEEEE----TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT
T ss_pred CCCEEEEEEEec-C-CCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC
Confidence 899999997765 1 1233456899999997432211 1111 011 1288999999999999999997543222
Q ss_pred cccCcHHHHHHHHHHHHhhCCC--CcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhh
Q 000293 267 FTAADSDDICTAIQFIGKARPW--TTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEE 330 (1712)
Q Consensus 267 y~a~~tdDL~aVLd~I~kryP~--spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e 330 (1712)
.....+|..++|+++..+ |. .++.++|.|++|...+..++..+. .|++++..++..|...
T Consensus 79 -~~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p--~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 79 -SPNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPP--HLKAIVPQSGWSDLYR 140 (272)
T ss_dssp -SHHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-T--TEEEEEEESE-SBTCC
T ss_pred -ChhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCC--CceEEEecccCCcccc
Confidence 344678999999999887 64 489999999999998888775443 6999999888888765
No 79
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.10 E-value=1.6e-09 Score=130.76 Aligned_cols=232 Identities=17% Similarity=0.142 Sum_probs=124.6
Q ss_pred cceEEEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q 000293 184 LEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTT 263 (1712)
Q Consensus 184 v~YrRe~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~lts 263 (1712)
...++..|..++ +.|....+.|. .....|+||++.|+ .+-.+.+++.+..++..+|+.++++|.||.|.|....
T Consensus 163 ~~i~~v~iP~eg-~~I~g~LhlP~----~~~p~P~VIv~gGl-Ds~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~ 236 (411)
T PF06500_consen 163 YPIEEVEIPFEG-KTIPGYLHLPS----GEKPYPTVIVCGGL-DSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWP 236 (411)
T ss_dssp SEEEEEEEEETT-CEEEEEEEESS----SSS-EEEEEEE--T-TS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-
T ss_pred CCcEEEEEeeCC-cEEEEEEEcCC----CCCCCCEEEEeCCc-chhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCC
Confidence 445677777766 55654333332 23345788888886 5566667666667789999999999999999985221
Q ss_pred CCCcccCcHHHHHHHHHHHHhhC--CCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCC-hhhhhcc-Cchhh
Q 000293 264 SRLFTAADSDDICTAIQFIGKAR--PWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFD-LEEATRS-SPHHI 339 (1712)
Q Consensus 264 prly~a~~tdDL~aVLd~I~kry--P~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~D-l~e~~~s-l~~~~ 339 (1712)
+......=..++++|+...- ...++.++|+|+||+++++.+.-+.. +|+|+|+.+++.+ +...... .....
T Consensus 237 ---l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~--RlkavV~~Ga~vh~~ft~~~~~~~~P~ 311 (411)
T PF06500_consen 237 ---LTQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDP--RLKAVVALGAPVHHFFTDPEWQQRVPD 311 (411)
T ss_dssp ---S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTT--T-SEEEEES---SCGGH-HHHHTTS-H
T ss_pred ---CCcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhccc--ceeeEeeeCchHhhhhccHHHHhcCCH
Confidence 11111123457899987642 24599999999999999998876543 7999999998753 3221110 00001
Q ss_pred HhHHHHHHHHHHHHHhhhhhhhccCCCCCHHHHhhhccHHHHHHHHhhhccchh--cHHHH---HhhcCcch--hc--Cc
Q 000293 340 ALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFE--AIEDF---YSKSSTRS--VV--GN 410 (1712)
Q Consensus 340 ly~~~La~~Lk~~L~~~~~lf~~~~~~~Die~IlkaktlrEFDd~~t~~~~Gf~--sv~eY---Yr~aS~~~--~L--~k 410 (1712)
.|. . .+.. ..|+. +.+.+ ....|... .+ .+
T Consensus 312 my~----d----~LA~---------------------------------rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr 350 (411)
T PF06500_consen 312 MYL----D----VLAS---------------------------------RLGMAAVSDESLRGELNKFSLKTQGLLSGRR 350 (411)
T ss_dssp HHH----H----HHHH---------------------------------HCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-
T ss_pred HHH----H----HHHH---------------------------------HhCCccCCHHHHHHHHHhcCcchhccccCCC
Confidence 110 0 0100 01111 00011 11223221 34 67
Q ss_pred CCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEec-CCCccccCCCCchhHHHHHHHHHHHHHH
Q 000293 411 IKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCS-CLPSSVIGGGRAAESWCQNLVIEWLSAV 475 (1712)
Q Consensus 411 IkVPtLII~G-DDp~VP~~aip~~la~~nPnv~LvLt~-gGHH~gF~e~~~~~sWv~r~VlEFL~av 475 (1712)
.++|+|.+++ +|+++|.+.... .+....+-+...++ ..=|.+|.. ....+.+||+..
T Consensus 351 ~~~plL~i~~~~D~v~P~eD~~l-ia~~s~~gk~~~~~~~~~~~gy~~-------al~~~~~Wl~~~ 409 (411)
T PF06500_consen 351 CPTPLLAINGEDDPVSPIEDSRL-IAESSTDGKALRIPSKPLHMGYPQ-------ALDEIYKWLEDK 409 (411)
T ss_dssp BSS-EEEEEETT-SSS-HHHHHH-HHHTBTT-EEEEE-SSSHHHHHHH-------HHHHHHHHHHHH
T ss_pred CCcceEEeecCCCCCCCHHHHHH-HHhcCCCCceeecCCCccccchHH-------HHHHHHHHHHHh
Confidence 8899999999 899988765433 23444444555555 454777763 356788888754
No 80
>PRK11460 putative hydrolase; Provisional
Probab=99.10 E-value=3.3e-09 Score=120.09 Aligned_cols=190 Identities=13% Similarity=0.067 Sum_probs=112.0
Q ss_pred CCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC-Cc------ccCcH-------HHHHHHH
Q 000293 214 GLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSR-LF------TAADS-------DDICTAI 279 (1712)
Q Consensus 214 ~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltspr-ly------~a~~t-------dDL~aVL 279 (1712)
...|+||++||+ |++.. .+..++..+.+.++.+.+++.||...+.....+ .| ..... +++.+.+
T Consensus 14 ~~~~~vIlLHG~-G~~~~-~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i 91 (232)
T PRK11460 14 PAQQLLLLFHGV-GDNPV-AMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETV 91 (232)
T ss_pred CCCcEEEEEeCC-CCChH-HHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHH
Confidence 346899999997 44444 456788888888887888888886533211111 11 01111 2233445
Q ss_pred HHHHhhCC--CCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhHhHHHHHHHHHHHHHhhh
Q 000293 280 QFIGKARP--WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNK 357 (1712)
Q Consensus 280 d~I~kryP--~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~~La~~Lk~~L~~~~ 357 (1712)
+++..++. ..+++++|||+||.+++.++..+++ .+.+++++++.+. .
T Consensus 92 ~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~--~~~~vv~~sg~~~------~----------------------- 140 (232)
T PRK11460 92 RYWQQQSGVGASATALIGFSQGAIMALEAVKAEPG--LAGRVIAFSGRYA------S----------------------- 140 (232)
T ss_pred HHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCC--cceEEEEeccccc------c-----------------------
Confidence 55555543 4589999999999999988877653 3444554432110 0
Q ss_pred hhhhccCCCCCHHHHhhhccHHHHHHHHhhhccchhcHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHH---H
Q 000293 358 ELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPR---S 433 (1712)
Q Consensus 358 ~lf~~~~~~~Die~IlkaktlrEFDd~~t~~~~Gf~sv~eYYr~aS~~~~L~kIkVPtLII~G-DDp~VP~~aip~---~ 433 (1712)
++ .....++|+|++|| +|+++|...... .
T Consensus 141 --~~---------------------------------------------~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~ 173 (232)
T PRK11460 141 --LP---------------------------------------------ETAPTATTIHLIHGGEDPVIDVAHAVAAQEA 173 (232)
T ss_pred --cc---------------------------------------------ccccCCCcEEEEecCCCCccCHHHHHHHHHH
Confidence 00 00113589999999 999999754322 2
Q ss_pred HHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHHHh-----hhccCCCCCcccc
Q 000293 434 SIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVEL-----GLLKGRHPLLKDV 490 (1712)
Q Consensus 434 la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~~-----~llkg~~p~~~d~ 490 (1712)
+.+...++++..+++++|..-.+ ..+.+.+||..... .-++|-+|-=.||
T Consensus 174 L~~~g~~~~~~~~~~~gH~i~~~-------~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 228 (232)
T PRK11460 174 LISLGGDVTLDIVEDLGHAIDPR-------LMQFALDRLRYTVPKRYWDEALSGGKPGDDDV 228 (232)
T ss_pred HHHCCCCeEEEEECCCCCCCCHH-------HHHHHHHHHHHHcchhhHHHHhccCcCCCCcc
Confidence 22234567888999988854321 23556666655321 2356656544443
No 81
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.10 E-value=3.5e-09 Score=112.45 Aligned_cols=102 Identities=16% Similarity=0.161 Sum_probs=68.7
Q ss_pred CcEEEEeCCCCCCChhHHHHHHHHHHHhC--CcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEE
Q 000293 216 DTTLLLVPGTAEGSIEKRIRLFVCEALRR--GFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMS 293 (1712)
Q Consensus 216 ~PtVVLLHGltGGS~~sYir~La~~Llq~--GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spLvL 293 (1712)
.|+|+++||+.+ +...|.... ..+... .|+|+++|+||||.|. .. ........+|+..+++.+ ...++++
T Consensus 21 ~~~i~~~hg~~~-~~~~~~~~~-~~~~~~~~~~~~~~~d~~g~g~s~-~~-~~~~~~~~~~~~~~~~~~----~~~~~~l 92 (282)
T COG0596 21 GPPLVLLHGFPG-SSSVWRPVF-KVLPALAARYRVIAPDLRGHGRSD-PA-GYSLSAYADDLAALLDAL----GLEKVVL 92 (282)
T ss_pred CCeEEEeCCCCC-chhhhHHHH-HHhhccccceEEEEecccCCCCCC-cc-cccHHHHHHHHHHHHHHh----CCCceEE
Confidence 458999999854 444443311 122221 1999999999999986 11 001111145666666644 3345999
Q ss_pred EEecHHHHHHHHHHHHcCCCCCccEEEEecCCCC
Q 000293 294 VGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFD 327 (1712)
Q Consensus 294 VGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~D 327 (1712)
+||||||.+++.|+..+++ .+.++++++++..
T Consensus 93 ~G~S~Gg~~~~~~~~~~p~--~~~~~v~~~~~~~ 124 (282)
T COG0596 93 VGHSMGGAVALALALRHPD--RVRGLVLIGPAPP 124 (282)
T ss_pred EEecccHHHHHHHHHhcch--hhheeeEecCCCC
Confidence 9999999999999999876 6889999887654
No 82
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.08 E-value=1.8e-09 Score=119.99 Aligned_cols=109 Identities=13% Similarity=0.106 Sum_probs=79.7
Q ss_pred CCCcEEEEeCCCCCCChhHHH--HHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCc-------ccCcHHHHHHHHHHHHh
Q 000293 214 GLDTTLLLVPGTAEGSIEKRI--RLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLF-------TAADSDDICTAIQFIGK 284 (1712)
Q Consensus 214 ~~~PtVVLLHGltGGS~~sYi--r~La~~Llq~GYrVVVfD~RGhGgS~ltsprly-------~a~~tdDL~aVLd~I~k 284 (1712)
+..|+||++||++ ++...+. ..+...+.+.||.|+++|+||++.+... ...+ ......|+..+++++..
T Consensus 11 ~~~P~vv~lHG~~-~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 88 (212)
T TIGR01840 11 GPRALVLALHGCG-QTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNC-WDWFFTHHRARGTGEVESLHQLIDAVKA 88 (212)
T ss_pred CCCCEEEEeCCCC-CCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCC-CCCCCccccCCCCccHHHHHHHHHHHHH
Confidence 3578999999974 3444443 1355566678999999999999865321 1111 12356889999999988
Q ss_pred hCCC--CcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCC
Q 000293 285 ARPW--TTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPF 326 (1712)
Q Consensus 285 ryP~--spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~ 326 (1712)
+++. .+++++||||||.+++.++..+++ .+.++++++++.
T Consensus 89 ~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~--~~~~~~~~~g~~ 130 (212)
T TIGR01840 89 NYSIDPNRVYVTGLSAGGGMTAVLGCTYPD--VFAGGASNAGLP 130 (212)
T ss_pred hcCcChhheEEEEECHHHHHHHHHHHhCch--hheEEEeecCCc
Confidence 7753 589999999999999999988765 577777777553
No 83
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.08 E-value=1.6e-09 Score=126.61 Aligned_cols=239 Identities=18% Similarity=0.154 Sum_probs=136.4
Q ss_pred CCCCcEEEEeCCCCCCChhHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcE
Q 000293 213 HGLDTTLLLVPGTAEGSIEKRIRLFVCEALR-RGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTL 291 (1712)
Q Consensus 213 ~~~~PtVVLLHGltGGS~~sYir~La~~Llq-~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spL 291 (1712)
....|+++++||+.| +... |+.+...|.+ .|-.++..|.|-||.|+..++..|. ...+|+..+|+.....+-..++
T Consensus 49 ~~~~Pp~i~lHGl~G-S~~N-w~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~-~ma~dv~~Fi~~v~~~~~~~~~ 125 (315)
T KOG2382|consen 49 LERAPPAIILHGLLG-SKEN-WRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYE-AMAEDVKLFIDGVGGSTRLDPV 125 (315)
T ss_pred cCCCCceEEeccccc-CCCC-HHHHHHHhcccccCceEEEecccCCCCccccccCHH-HHHHHHHHHHHHcccccccCCc
Confidence 345799999999965 5544 5667766654 5778999999999999877766543 3468899999888654445689
Q ss_pred EEEEecHHH-HHHHHHHHHcCCCCCccEEEEec-CCCChhhhhccCchhhHhHHHHH--------HHHHHHHHhhhhhhh
Q 000293 292 MSVGWGYGA-NMLTKYLAEVGERTPLTAVTCID-NPFDLEEATRSSPHHIALDEKLA--------NGLIDILRSNKELFK 361 (1712)
Q Consensus 292 vLVGhSMGG-~IaL~YLge~ge~s~V~AaVlIS-~P~Dl~e~~~sl~~~~ly~~~La--------~~Lk~~L~~~~~lf~ 361 (1712)
+++|||||| -+++.+....+. .+..++++. +|.-..... ..+..++..... ...+..+.+..
T Consensus 126 ~l~GHsmGG~~~~m~~t~~~p~--~~~rliv~D~sP~~~~~~~--~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~---- 197 (315)
T KOG2382|consen 126 VLLGHSMGGVKVAMAETLKKPD--LIERLIVEDISPGGVGRSY--GEYRELIKAMIQLDLSIGVSRGRKEALKSLI---- 197 (315)
T ss_pred eecccCcchHHHHHHHHHhcCc--ccceeEEEecCCccCCccc--chHHHHHHHHHhccccccccccHHHHHHHHH----
Confidence 999999999 455555555544 466666664 332111000 000001100000 00000000000
Q ss_pred ccCCCCCHHHHhhhccHHHHHHH-Hh----hhccch----hcHHHHHhh---cCcchhc--CcCCccEEEEEe-CCCCCC
Q 000293 362 GRAKGFDVEKALSAKSVRDFEKA-IS----MVSYGF----EAIEDFYSK---SSTRSVV--GNIKIPVLFIQN-DAGAVP 426 (1712)
Q Consensus 362 ~~~~~~Die~IlkaktlrEFDd~-~t----~~~~Gf----~sv~eYYr~---aS~~~~L--~kIkVPtLII~G-DDp~VP 426 (1712)
.+.....+++|-.. +. ...+.| .++.+.|.. .+....+ ..-..|||+|+| .++++|
T Consensus 198 ---------~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~ 268 (315)
T KOG2382|consen 198 ---------EVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVP 268 (315)
T ss_pred ---------HHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcC
Confidence 00001112222110 00 001111 122222222 2222223 556789999999 999999
Q ss_pred CCChHHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHH
Q 000293 427 PFSIPRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAV 475 (1712)
Q Consensus 427 ~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av 475 (1712)
.+..++- .+..|++++.+++.+||+...+ +|. -+.+.|.+|+...
T Consensus 269 ~~~~~~~-~~~fp~~e~~~ld~aGHwVh~E--~P~-~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 269 DEHYPRM-EKIFPNVEVHELDEAGHWVHLE--KPE-EFIESISEFLEEP 313 (315)
T ss_pred hhHHHHH-HHhccchheeecccCCceeecC--CHH-HHHHHHHHHhccc
Confidence 8877653 4568999999999877766665 344 4677888888654
No 84
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.02 E-value=1.7e-09 Score=120.38 Aligned_cols=109 Identities=25% Similarity=0.278 Sum_probs=80.1
Q ss_pred EEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC--C
Q 000293 189 VCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSR--L 266 (1712)
Q Consensus 189 e~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltspr--l 266 (1712)
..+.++||..+..+.+... +..+-.+++.|-+ |-...|+|.++..+.++||.|+.+|+||.|.|..+.-+ .
T Consensus 8 ~~l~~~DG~~l~~~~~pA~------~~~~g~~~va~a~-Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~ 80 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPAD------GKASGRLVVAGAT-GVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQ 80 (281)
T ss_pred cccccCCCccCccccccCC------CCCCCcEEecccC-CcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCc
Confidence 4578899999887755321 1223233444433 34456789999999999999999999999999655433 2
Q ss_pred cccCc--HHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHH
Q 000293 267 FTAAD--SDDICTAIQFIGKARPWTTLMSVGWGYGANMLT 304 (1712)
Q Consensus 267 y~a~~--tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL 304 (1712)
+.+.+ ..|+.++|+.+++..|..|.+.|||||||.++.
T Consensus 81 ~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~g 120 (281)
T COG4757 81 WRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALG 120 (281)
T ss_pred cchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeec
Confidence 22222 369999999999988989999999999997754
No 85
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.01 E-value=1.6e-08 Score=115.37 Aligned_cols=202 Identities=13% Similarity=0.163 Sum_probs=134.4
Q ss_pred EEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCC-CCCCCCC--CC
Q 000293 189 VCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGC-GGSPLTT--SR 265 (1712)
Q Consensus 189 e~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGh-GgS~lts--pr 265 (1712)
..+..+| +.+..-|..+. ..+..|.||++|++.| - ..+++.+++.++..||.|+++|+-+. |.+.... +.
T Consensus 5 v~~~~~~-~~~~~~~a~P~----~~~~~P~VIv~hei~G-l-~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~ 77 (236)
T COG0412 5 VTIPAPD-GELPAYLARPA----GAGGFPGVIVLHEIFG-L-NPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPA 77 (236)
T ss_pred eEeeCCC-ceEeEEEecCC----cCCCCCEEEEEecccC-C-chHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHH
Confidence 3456667 45554455442 1222389999999854 2 34799999999999999999999874 3332111 11
Q ss_pred ---------CcccCcHHHHHHHHHHHHhhC--CCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhcc
Q 000293 266 ---------LFTAADSDDICTAIQFIGKAR--PWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRS 334 (1712)
Q Consensus 266 ---------ly~a~~tdDL~aVLd~I~kry--P~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~s 334 (1712)
........|+.++++++..+. ...+|.++||||||.+++.++...+ .++++++.-+..-..
T Consensus 78 ~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~---~v~a~v~fyg~~~~~----- 149 (236)
T COG0412 78 ELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP---EVKAAVAFYGGLIAD----- 149 (236)
T ss_pred HHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC---CccEEEEecCCCCCC-----
Confidence 111234589999999998653 2458999999999999999998754 488887652111000
Q ss_pred CchhhHhHHHHHHHHHHHHHhhhhhhhccCCCCCHHHHhhhccHHHHHHHHhhhccchhcHHHHHhhcCcchhcCcCCcc
Q 000293 335 SPHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIP 414 (1712)
Q Consensus 335 l~~~~ly~~~La~~Lk~~L~~~~~lf~~~~~~~Die~IlkaktlrEFDd~~t~~~~Gf~sv~eYYr~aS~~~~L~kIkVP 414 (1712)
......++++|
T Consensus 150 ---------------------------------------------------------------------~~~~~~~~~~p 160 (236)
T COG0412 150 ---------------------------------------------------------------------DTADAPKIKVP 160 (236)
T ss_pred ---------------------------------------------------------------------cccccccccCc
Confidence 00113478899
Q ss_pred EEEEEe-CCCCCCCCCh---HHHHHhcCCCeEEEEecCCCccccCCC----C------chhHHHHHHHHHHHHHHH
Q 000293 415 VLFIQN-DAGAVPPFSI---PRSSIAENPFTSLLLCSCLPSSVIGGG----R------AAESWCQNLVIEWLSAVE 476 (1712)
Q Consensus 415 tLII~G-DDp~VP~~ai---p~~la~~nPnv~LvLt~gGHH~gF~e~----~------~~~sWv~r~VlEFL~av~ 476 (1712)
+|+++| .|+.+|.... ..........+.+.++++++|.|+... . ....| +.+.+||++..
T Consensus 161 vl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~--~~~~~ff~~~~ 234 (236)
T COG0412 161 VLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAW--QRVLAFFKRLL 234 (236)
T ss_pred EEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHH--HHHHHHHHHhc
Confidence 999999 9999987543 223322334788999999999998542 1 12234 78888887653
No 86
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.00 E-value=2.2e-08 Score=119.03 Aligned_cols=240 Identities=15% Similarity=0.138 Sum_probs=131.5
Q ss_pred cCCcceEEEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCC
Q 000293 181 EGKLEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSP 260 (1712)
Q Consensus 181 ~p~v~YrRe~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ 260 (1712)
.+.+.+....++..+|..+......|.+ ..+..|.||.+||..+ ....+.. .+ ..+.+||.|+.+|.||+|+..
T Consensus 51 ~~~~~vy~v~f~s~~g~~V~g~l~~P~~---~~~~~Pavv~~hGyg~-~~~~~~~-~~-~~a~~G~~vl~~d~rGqg~~~ 124 (320)
T PF05448_consen 51 TPGVEVYDVSFESFDGSRVYGWLYRPKN---AKGKLPAVVQFHGYGG-RSGDPFD-LL-PWAAAGYAVLAMDVRGQGGRS 124 (320)
T ss_dssp BSSEEEEEEEEEEGGGEEEEEEEEEES----SSSSEEEEEEE--TT---GGGHHH-HH-HHHHTT-EEEEE--TTTSSSS
T ss_pred CCCEEEEEEEEEccCCCEEEEEEEecCC---CCCCcCEEEEecCCCC-CCCCccc-cc-ccccCCeEEEEecCCCCCCCC
Confidence 3567777788888899888754443321 2356789999999743 3333322 22 467899999999999999431
Q ss_pred C-C------CC------------C-CcccCcHHHHHHHHHHHHhhCC--CCcEEEEEecHHHHHHHHHHHHcCCCCCccE
Q 000293 261 L-T------TS------------R-LFTAADSDDICTAIQFIGKARP--WTTLMSVGWGYGANMLTKYLAEVGERTPLTA 318 (1712)
Q Consensus 261 l-t------sp------------r-ly~a~~tdDL~aVLd~I~kryP--~spLvLVGhSMGG~IaL~YLge~ge~s~V~A 318 (1712)
. . .. . .|......|+..+++++..+.. ..+|.+.|.|.||.+++..++-.+ +|++
T Consensus 125 ~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~---rv~~ 201 (320)
T PF05448_consen 125 PDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP---RVKA 201 (320)
T ss_dssp -B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS---T-SE
T ss_pred CCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc---cccE
Confidence 1 0 00 0 0001124789999999987632 469999999999999999888754 5888
Q ss_pred EEEecCCC-Chhhhhcc----CchhhHhHHHHHHHHHHHHHhhhhhhhccCCCCCHHHHhhhccHHHHHHHHhhhccchh
Q 000293 319 VTCIDNPF-DLEEATRS----SPHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFE 393 (1712)
Q Consensus 319 aVlIS~P~-Dl~e~~~s----l~~~~ly~~~La~~Lk~~L~~~~~lf~~~~~~~Die~IlkaktlrEFDd~~t~~~~Gf~ 393 (1712)
++...+.+ |....... .+|. .+.++++.. .. ..+-++.+.
T Consensus 202 ~~~~vP~l~d~~~~~~~~~~~~~y~---------~~~~~~~~~----d~---------------~~~~~~~v~------- 246 (320)
T PF05448_consen 202 AAADVPFLCDFRRALELRADEGPYP---------EIRRYFRWR----DP---------------HHEREPEVF------- 246 (320)
T ss_dssp EEEESESSSSHHHHHHHT--STTTH---------HHHHHHHHH----SC---------------THCHHHHHH-------
T ss_pred EEecCCCccchhhhhhcCCccccHH---------HHHHHHhcc----CC---------------CcccHHHHH-------
Confidence 87775543 33322110 0110 111111100 00 000000000
Q ss_pred cHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCC-CeEEEEecCCCccccCCCCchhHHHHHHHHHH
Q 000293 394 AIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENP-FTSLLLCSCLPSSVIGGGRAAESWCQNLVIEW 471 (1712)
Q Consensus 394 sv~eYYr~aS~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~nP-nv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEF 471 (1712)
....|| +..+..++|++|+|+-.| .|++|||.+. .+.....+ ..++.+++.+||.... .+..+...+|
T Consensus 247 ~~L~Y~---D~~nfA~ri~~pvl~~~gl~D~~cPP~t~-fA~yN~i~~~K~l~vyp~~~He~~~------~~~~~~~~~~ 316 (320)
T PF05448_consen 247 ETLSYF---DAVNFARRIKCPVLFSVGLQDPVCPPSTQ-FAAYNAIPGPKELVVYPEYGHEYGP------EFQEDKQLNF 316 (320)
T ss_dssp HHHHTT----HHHHGGG--SEEEEEEETT-SSS-HHHH-HHHHCC--SSEEEEEETT--SSTTH------HHHHHHHHHH
T ss_pred HHHhhh---hHHHHHHHcCCCEEEEEecCCCCCCchhH-HHHHhccCCCeeEEeccCcCCCchh------hHHHHHHHHH
Confidence 011222 334557789999999999 9999998643 23333333 4789999999994443 2335778889
Q ss_pred HHH
Q 000293 472 LSA 474 (1712)
Q Consensus 472 L~a 474 (1712)
|..
T Consensus 317 l~~ 319 (320)
T PF05448_consen 317 LKE 319 (320)
T ss_dssp HHH
T ss_pred Hhc
Confidence 875
No 87
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.98 E-value=3.1e-09 Score=132.57 Aligned_cols=228 Identities=14% Similarity=0.129 Sum_probs=135.1
Q ss_pred CCCcEEEEeCCCCCCChhHHH------HHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcc-cCcHHHHHHHHHHHHhhC
Q 000293 214 GLDTTLLLVPGTAEGSIEKRI------RLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFT-AADSDDICTAIQFIGKAR 286 (1712)
Q Consensus 214 ~~~PtVVLLHGltGGS~~sYi------r~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~-a~~tdDL~aVLd~I~kry 286 (1712)
..+.+|||+|.+- ...|+ ++++++|+++||.|+++|+|.-+... +.+. ..+.+.+.++|+.++...
T Consensus 213 v~~~PLLIVPp~I---NK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~----r~~~ldDYv~~i~~Ald~V~~~t 285 (560)
T TIGR01839 213 QHARPLLVVPPQI---NKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH----REWGLSTYVDALKEAVDAVRAIT 285 (560)
T ss_pred cCCCcEEEechhh---hhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh----cCCCHHHHHHHHHHHHHHHHHhc
Confidence 3467899999973 34553 67999999999999999999866542 2222 234568889999999888
Q ss_pred CCCcEEEEEecHHHHHHHH----HHHHcCCCCCccEEEEecCCCChhhhhcc--Cc-hh-h-HhHH-----------HHH
Q 000293 287 PWTTLMSVGWGYGANMLTK----YLAEVGERTPLTAVTCIDNPFDLEEATRS--SP-HH-I-ALDE-----------KLA 346 (1712)
Q Consensus 287 P~spLvLVGhSMGG~IaL~----YLge~ge~s~V~AaVlIS~P~Dl~e~~~s--l~-~~-~-ly~~-----------~La 346 (1712)
+..++.++||||||.+++. |++.+++ .+|+.++++.+++|+...... +. .. . .... .+.
T Consensus 286 G~~~vnl~GyC~GGtl~a~~~a~~aA~~~~-~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~G~lpg~~ma 364 (560)
T TIGR01839 286 GSRDLNLLGACAGGLTCAALVGHLQALGQL-RKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQAGVLDGSEMA 364 (560)
T ss_pred CCCCeeEEEECcchHHHHHHHHHHHhcCCC-CceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhcCCcCHHHHH
Confidence 8889999999999999987 6666543 369999999999997643211 00 00 0 0000 000
Q ss_pred HHHHHHHHhhhhhhhccCCCCCHHHHhhhccHHHHH------HH--HhhhccchhcHHHHHhhcCcch-----------h
Q 000293 347 NGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFE------KA--ISMVSYGFEAIEDFYSKSSTRS-----------V 407 (1712)
Q Consensus 347 ~~Lk~~L~~~~~lf~~~~~~~Die~IlkaktlrEFD------d~--~t~~~~Gf~sv~eYYr~aS~~~-----------~ 407 (1712)
..+ ..++.+..++. +-....+.-..-.-|| +. +.... |....++|....... .
T Consensus 365 ~~F-~~LrP~dliw~-----y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~--~~e~l~ly~~N~L~~pG~l~v~G~~id 436 (560)
T TIGR01839 365 KVF-AWMRPNDLIWN-----YWVNNYLLGNEPPAFDILYWNNDTTRLPAAF--HGDLLDMFKSNPLTRPDALEVCGTPID 436 (560)
T ss_pred HHH-HhcCchhhhHH-----HHHHHhhcCCCcchhhHHHHhCcCccchHHH--HHHHHHHHhcCCCCCCCCEEECCEEec
Confidence 000 00110000000 0000000000001111 00 11111 222334665544322 4
Q ss_pred cCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCccccCCC
Q 000293 408 VGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGG 457 (1712)
Q Consensus 408 L~kIkVPtLII~G-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~ 457 (1712)
+++|++|+|++.+ +|.++|+.+............++++.++||-.+....
T Consensus 437 L~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~~gGHIggivnp 487 (560)
T TIGR01839 437 LKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKRRFVLSNSGHIQSILNP 487 (560)
T ss_pred hhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCeEEEecCCCccccccCC
Confidence 7899999999999 9999998765332212223588999999988887754
No 88
>PRK10162 acetyl esterase; Provisional
Probab=98.97 E-value=5.4e-08 Score=115.21 Aligned_cols=131 Identities=11% Similarity=0.063 Sum_probs=88.7
Q ss_pred cceEEEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCC--CChhHHHHHHHHHHHh-CCcEEEEEcCCCCCCCC
Q 000293 184 LEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAE--GSIEKRIRLFVCEALR-RGFFPVVMNPRGCGGSP 260 (1712)
Q Consensus 184 v~YrRe~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltG--GS~~sYir~La~~Llq-~GYrVVVfD~RGhGgS~ 260 (1712)
+..+...+...+| .+.++++.+. ....|+||++||++. |+... +..++..++. .||.|+.+|||.....+
T Consensus 55 ~~~~~~~i~~~~g-~i~~~~y~P~-----~~~~p~vv~~HGGg~~~g~~~~-~~~~~~~la~~~g~~Vv~vdYrlape~~ 127 (318)
T PRK10162 55 MATRAYMVPTPYG-QVETRLYYPQ-----PDSQATLFYLHGGGFILGNLDT-HDRIMRLLASYSGCTVIGIDYTLSPEAR 127 (318)
T ss_pred ceEEEEEEecCCC-ceEEEEECCC-----CCCCCEEEEEeCCcccCCCchh-hhHHHHHHHHHcCCEEEEecCCCCCCCC
Confidence 3333344666666 5777887652 123589999999532 23333 3445666665 69999999999764322
Q ss_pred CCCCCCcccCcHHHHHHHHHHHHhh---C--CCCcEEEEEecHHHHHHHHHHHHcCC----CCCccEEEEecCCCCh
Q 000293 261 LTTSRLFTAADSDDICTAIQFIGKA---R--PWTTLMSVGWGYGANMLTKYLAEVGE----RTPLTAVTCIDNPFDL 328 (1712)
Q Consensus 261 ltsprly~a~~tdDL~aVLd~I~kr---y--P~spLvLVGhSMGG~IaL~YLge~ge----~s~V~AaVlIS~P~Dl 328 (1712)
|. ...+|+.++++|+.+. + ...+++++|+|+||++++..+....+ ...+.+++++++.++.
T Consensus 128 ------~p-~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 128 ------FP-QAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred ------CC-CcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCC
Confidence 21 2468999999998652 3 24589999999999999988765321 1358888888887765
No 89
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.96 E-value=5e-09 Score=127.10 Aligned_cols=287 Identities=17% Similarity=0.132 Sum_probs=171.4
Q ss_pred CcceEEEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHH----HHHHHHHHHhCCcEEEEEcCCCCCC
Q 000293 183 KLEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKR----IRLFVCEALRRGFFPVVMNPRGCGG 258 (1712)
Q Consensus 183 ~v~YrRe~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sY----ir~La~~Llq~GYrVVVfD~RGhGg 258 (1712)
..+.+...+++.||-.+.+...+.. .+.+|+|++.||+...|..+. -..++-.|+.+||.|+.-|.||---
T Consensus 45 gy~~E~h~V~T~DgYiL~lhRIp~~-----~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~y 119 (403)
T KOG2624|consen 45 GYPVEEHEVTTEDGYILTLHRIPRG-----KKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTY 119 (403)
T ss_pred CCceEEEEEEccCCeEEEEeeecCC-----CCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCccc
Confidence 4567888999999998888766442 167899999999976554432 3567778999999999999999655
Q ss_pred CCC----C---CCCCcccCc----HHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCC-CCccEEEEecCCC
Q 000293 259 SPL----T---TSRLFTAAD----SDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGER-TPLTAVTCIDNPF 326 (1712)
Q Consensus 259 S~l----t---sprly~a~~----tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~-s~V~AaVlIS~P~ 326 (1712)
|.. . ...+|...+ ..|+.++|+||.......+++.||||-|+.+...++.+.++- .+|+...+++|..
T Consensus 120 Sr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 120 SRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred chhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 521 1 222444433 469999999999888888999999999999998888887542 4688888887766
Q ss_pred ChhhhhccC------c-------hhh------H-----hHHHHHHHHHH---HHHhhh----hhhhccC-CCCCHHH---
Q 000293 327 DLEEATRSS------P-------HHI------A-----LDEKLANGLID---ILRSNK----ELFKGRA-KGFDVEK--- 371 (1712)
Q Consensus 327 Dl~e~~~sl------~-------~~~------l-----y~~~La~~Lk~---~L~~~~----~lf~~~~-~~~Die~--- 371 (1712)
... ....+ . ... + +.+.+.+.++. ...... -.+.+.. ..++...
T Consensus 200 ~~k-~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~ 278 (403)
T KOG2624|consen 200 FPK-HIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLPV 278 (403)
T ss_pred hhc-ccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccch
Confidence 322 11100 0 000 0 00011111110 000000 0000000 0000000
Q ss_pred H-------hhhccHHHHHHHHhh---hccchhc--HHHHHhhc-CcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhc
Q 000293 372 A-------LSAKSVRDFEKAISM---VSYGFEA--IEDFYSKS-STRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAE 437 (1712)
Q Consensus 372 I-------lkaktlrEFDd~~t~---~~~Gf~s--v~eYYr~a-S~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~ 437 (1712)
+ .+.+.+..|-+.+.. +.+.|.+ -..+|... .+...+.+|++|+.+.+| +|.++.++.+.... ..
T Consensus 279 ~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~-~~ 357 (403)
T KOG2624|consen 279 YLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILL-LV 357 (403)
T ss_pred hhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHH-Hh
Confidence 0 012233333332221 1122222 22334443 356679999999999999 88888777665433 33
Q ss_pred CCCeEEEE---ecCCCccccCCCCchhHHHHHHHHHHHHHHH
Q 000293 438 NPFTSLLL---CSCLPSSVIGGGRAAESWCQNLVIEWLSAVE 476 (1712)
Q Consensus 438 nPnv~LvL---t~gGHH~gF~e~~~~~sWv~r~VlEFL~av~ 476 (1712)
.++..... .+.=.|.-|.-+.+....+.+.|++.++...
T Consensus 358 ~~~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 358 LPNSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred cccccccccccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 44443322 5666777777666666678899999988665
No 90
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.89 E-value=3.2e-08 Score=129.29 Aligned_cols=227 Identities=15% Similarity=0.132 Sum_probs=127.3
Q ss_pred HHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhC--------------C--CCcEEEEEecHH
Q 000293 236 LFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKAR--------------P--WTTLMSVGWGYG 299 (1712)
Q Consensus 236 ~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kry--------------P--~spLvLVGhSMG 299 (1712)
.+..+++.+||.||++|.||+|+|.... ..+.....+|..++|+|+..+. | +.++.++|.|+|
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~-~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~ 348 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCP-TTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYL 348 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcC-ccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHH
Confidence 3567889999999999999999997542 2233445789999999998532 1 469999999999
Q ss_pred HHHHHHHHHHcCCCCCccEEEEecCCCChhhhhcc-----CchhhHhHHHHHHHHHHHH-HhhhhhhhccCCCCCHHHHh
Q 000293 300 ANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRS-----SPHHIALDEKLANGLIDIL-RSNKELFKGRAKGFDVEKAL 373 (1712)
Q Consensus 300 G~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~s-----l~~~~ly~~~La~~Lk~~L-~~~~~lf~~~~~~~Die~Il 373 (1712)
|.+.+..|+..++ .++++|.+++..+.....+. .+..+. ... ...+...+ .+.. ..+.. .......
T Consensus 349 G~~~~~aAa~~pp--~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~-ged-~d~l~~~~~~r~~--~~~~~--~~~~~~~ 420 (767)
T PRK05371 349 GTLPNAVATTGVE--GLETIIPEAAISSWYDYYRENGLVRAPGGYQ-GED-LDVLAELTYSRNL--LAGDY--LRHNEAC 420 (767)
T ss_pred HHHHHHHHhhCCC--cceEEEeeCCCCcHHHHhhcCCceeccCCcC-Ccc-hhhHHHHhhhccc--Ccchh--hcchHHH
Confidence 9999887776543 58888888776554332211 000000 000 00000000 0000 00000 0000000
Q ss_pred hhccHHHHHHHHhhhccchhcHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCC-hHH--HHHhcCCCeEEEEecCC
Q 000293 374 SAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFS-IPR--SSIAENPFTSLLLCSCL 449 (1712)
Q Consensus 374 kaktlrEFDd~~t~~~~Gf~sv~eYYr~aS~~~~L~kIkVPtLII~G-DDp~VP~~a-ip~--~la~~nPnv~LvLt~gG 449 (1712)
. ..+.++...... .. ....+||...+....+.+|++|+|+||| .|..+++.. ... .+........+.+.+++
T Consensus 421 ~-~~~~~~~~~~~~-~~--~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~g~ 496 (767)
T PRK05371 421 E-KLLAELTAAQDR-KT--GDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQGG 496 (767)
T ss_pred H-HHHhhhhhhhhh-cC--CCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 0 000111111111 11 1235788888888889999999999999 999988642 222 12222345667666665
Q ss_pred CccccCCCCchhHHHHHHHHHHHHHHHhh
Q 000293 450 PSSVIGGGRAAESWCQNLVIEWLSAVELG 478 (1712)
Q Consensus 450 HH~gF~e~~~~~sWv~r~VlEFL~av~~~ 478 (1712)
|+ .... .....| .+.+.+||++...+
T Consensus 497 H~-~~~~-~~~~d~-~e~~~~Wfd~~LkG 522 (767)
T PRK05371 497 HV-YPNN-WQSIDF-RDTMNAWFTHKLLG 522 (767)
T ss_pred cc-CCCc-hhHHHH-HHHHHHHHHhcccc
Confidence 54 3222 122333 56778888765443
No 91
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.87 E-value=1.7e-07 Score=121.38 Aligned_cols=119 Identities=12% Similarity=0.084 Sum_probs=80.7
Q ss_pred EEEcCCCcEEEEEecCCCc--ccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC-----
Q 000293 190 CVNTEDGGVISLDWPSNLD--LHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLT----- 262 (1712)
Q Consensus 190 ~Ltt~DGg~LaLDW~~~~~--~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~lt----- 262 (1712)
.+..+||..+.+....... ........|+||++||+++ ... .|+.++..+.++||+|+++|+||||.+...
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g-~~~-~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~ 498 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITG-AKE-NALAFAGTLAAAGVATIAIDHPLHGARSFDANASG 498 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCC-CHH-HHHHHHHHHHhCCcEEEEeCCCCCCcccccccccc
Confidence 4667787776653221100 0011123479999999854 333 456788899999999999999999998432
Q ss_pred ----CCC--Cc-c-----------cCcHHHHHHHHHHHH------hh------CCCCcEEEEEecHHHHHHHHHHHHc
Q 000293 263 ----TSR--LF-T-----------AADSDDICTAIQFIG------KA------RPWTTLMSVGWGYGANMLTKYLAEV 310 (1712)
Q Consensus 263 ----spr--ly-~-----------a~~tdDL~aVLd~I~------kr------yP~spLvLVGhSMGG~IaL~YLge~ 310 (1712)
... .| + ...+.|+..+...++ .. ++..+++++||||||.+...|+...
T Consensus 499 ~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 499 VNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred ccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 111 11 1 112478888888887 33 6678999999999999999999763
No 92
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.83 E-value=2.4e-08 Score=116.79 Aligned_cols=244 Identities=15% Similarity=0.237 Sum_probs=97.5
Q ss_pred CCcEEEEeCCCCCCChh-HHHHHHHHHHHhCCcEEEEEcCCC----CCCCCCCCCCCcccCcHHHHHHHHHHHHhhC---
Q 000293 215 LDTTLLLVPGTAEGSIE-KRIRLFVCEALRRGFFPVVMNPRG----CGGSPLTTSRLFTAADSDDICTAIQFIGKAR--- 286 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~-sYir~La~~Llq~GYrVVVfD~RG----hGgS~ltsprly~a~~tdDL~aVLd~I~kry--- 286 (1712)
.+..||||.|++.|-.. .|+..++..|...||.++-+.++- +|-+. ...+++|+.++|+|++...
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~S-------L~~D~~eI~~~v~ylr~~~~g~ 104 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSS-------LDRDVEEIAQLVEYLRSEKGGH 104 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S---------HHHHHHHHHHHHHHHHHHS---
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcch-------hhhHHHHHHHHHHHHHHhhccc
Confidence 34689999999877655 599999999988899999998763 33322 1346899999999999873
Q ss_pred -CCCcEEEEEecHHHHHHHHHHHHcCC---CCCccEEEEecCCCChhhhhccCchhhHhHHHHHHHHHHHHHhh--hhhh
Q 000293 287 -PWTTLMSVGWGYGANMLTKYLAEVGE---RTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSN--KELF 360 (1712)
Q Consensus 287 -P~spLvLVGhSMGG~IaL~YLge~ge---~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~~La~~Lk~~L~~~--~~lf 360 (1712)
...+|+++|||-|-.-++.|+..... ..+|.++|+-++.-|-.........+..+.+.+.. .++.+.+. ..++
T Consensus 105 ~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~-A~~~i~~g~~~~~l 183 (303)
T PF08538_consen 105 FGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVAL-AKELIAEGKGDEIL 183 (303)
T ss_dssp ---S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHH-HHHHHHCT-TT-GG
T ss_pred cCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHH-HHHHHHcCCCCcee
Confidence 46799999999999999999988653 45799999988877654322110000112211110 11111111 0111
Q ss_pred hccCCCCCHHHHhhhccHHHHHHHHhhhccchhcHHHHHhh----cCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHH
Q 000293 361 KGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSK----SSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSI 435 (1712)
Q Consensus 361 ~~~~~~~Die~IlkaktlrEFDd~~t~~~~Gf~sv~eYYr~----aS~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la 435 (1712)
+......-. ....-+.+.|-. ......-+|||.. ......+..|++|+|++.+ .|..||...-...+.
T Consensus 184 p~~~~~~~~--~~~PiTA~Rf~S-----L~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll 256 (303)
T PF08538_consen 184 PREFTPLVF--YDTPITAYRFLS-----LASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALL 256 (303)
T ss_dssp ----GGTTT---SS---HHHHHT------S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT------------
T ss_pred ecccccccc--CCCcccHHHHHh-----ccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceecccccccccc
Confidence 110000000 000011122211 1111234555542 2234568899999999999 999998632111111
Q ss_pred h----cC-CC---eEEEEecCCCccccCCCC-chhHHHHHHHHHHHH
Q 000293 436 A----EN-PF---TSLLLCSCLPSSVIGGGR-AAESWCQNLVIEWLS 473 (1712)
Q Consensus 436 ~----~n-Pn---v~LvLt~gGHH~gF~e~~-~~~sWv~r~VlEFL~ 473 (1712)
+ .. +. ..-.+++|+.|..-.... .+..|+.+.|..||+
T Consensus 257 ~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 257 ERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp -----------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 1 11 11 124478999995544322 235688888888874
No 93
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.83 E-value=2.2e-08 Score=123.03 Aligned_cols=109 Identities=15% Similarity=0.231 Sum_probs=78.7
Q ss_pred CCcEEEEeCCCCCCC-hhHHHHHHHHHHHh--CCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhh--CCCC
Q 000293 215 LDTTLLLVPGTAEGS-IEKRIRLFVCEALR--RGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKA--RPWT 289 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS-~~sYir~La~~Llq--~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kr--yP~s 289 (1712)
.+|++|++||+.+.. ...|+..++..+.. ..|+|+++|+||+|.+.......+.....+++.++|+++... ++..
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~ 119 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWD 119 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 468999999996533 24466667766653 369999999999998754322222222346788888888643 3467
Q ss_pred cEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCC
Q 000293 290 TLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNP 325 (1712)
Q Consensus 290 pLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P 325 (1712)
++++|||||||.++..++...+. +|.+++++++.
T Consensus 120 ~VhLIGHSLGAhIAg~ag~~~p~--rV~rItgLDPA 153 (442)
T TIGR03230 120 NVHLLGYSLGAHVAGIAGSLTKH--KVNRITGLDPA 153 (442)
T ss_pred cEEEEEECHHHHHHHHHHHhCCc--ceeEEEEEcCC
Confidence 99999999999999987776554 58888888764
No 94
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.80 E-value=9.5e-08 Score=116.37 Aligned_cols=108 Identities=15% Similarity=0.103 Sum_probs=76.2
Q ss_pred CcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEEEE
Q 000293 216 DTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVG 295 (1712)
Q Consensus 216 ~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spLvLVG 295 (1712)
.|+|||++-+.+ ......|.+++.|+. |+.|++.||+--+..+....++....+++-+.++|+++ +. .+.++|
T Consensus 102 ~~pvLiV~Pl~g-~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~----G~-~v~l~G 174 (406)
T TIGR01849 102 GPAVLIVAPMSG-HYATLLRSTVEALLP-DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFL----GP-DIHVIA 174 (406)
T ss_pred CCcEEEEcCCch-HHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHh----CC-CCcEEE
Confidence 378999998753 333457899999999 99999999987776543333332222333333344433 33 389999
Q ss_pred ecHHHHHHHHHHHHcCC---CCCccEEEEecCCCChhh
Q 000293 296 WGYGANMLTKYLAEVGE---RTPLTAVTCIDNPFDLEE 330 (1712)
Q Consensus 296 hSMGG~IaL~YLge~ge---~s~V~AaVlIS~P~Dl~e 330 (1712)
+++||.+++.|++...+ +..++.++++.+|.|...
T Consensus 175 vCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 175 VCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARA 212 (406)
T ss_pred EchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCC
Confidence 99999998888876533 235899999999999864
No 95
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.77 E-value=1.8e-08 Score=117.21 Aligned_cols=109 Identities=12% Similarity=0.103 Sum_probs=77.1
Q ss_pred CCcEEEEeCCCCCCChhHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCCCCCccc-CcHHHHHHHHHHHHhh--CCCCc
Q 000293 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALR-RGFFPVVMNPRGCGGSPLTTSRLFTA-ADSDDICTAIQFIGKA--RPWTT 290 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYir~La~~Llq-~GYrVVVfD~RGhGgS~ltsprly~a-~~tdDL~aVLd~I~kr--yP~sp 290 (1712)
.+|++|++||+.+.....|...+...+++ .+|+|+++|++|++..... ...+.. ...+++..+|+++.+. .+..+
T Consensus 35 ~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~-~a~~~~~~v~~~la~~l~~L~~~~g~~~~~ 113 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYP-QAVNNTRVVGAELAKFLDFLVDNTGLSLEN 113 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChH-HHHHhHHHHHHHHHHHHHHHHHhcCCChHH
Confidence 46899999999664434566666665554 6899999999998432110 000111 1236788889988775 34568
Q ss_pred EEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCC
Q 000293 291 LMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPF 326 (1712)
Q Consensus 291 LvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~ 326 (1712)
+++|||||||.++..++...++ +|.+++.+.+..
T Consensus 114 i~lIGhSlGa~vAg~~a~~~~~--~v~~iv~LDPa~ 147 (275)
T cd00707 114 VHLIGHSLGAHVAGFAGKRLNG--KLGRITGLDPAG 147 (275)
T ss_pred EEEEEecHHHHHHHHHHHHhcC--ccceeEEecCCc
Confidence 9999999999999988887765 688899887653
No 96
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.75 E-value=1.5e-07 Score=107.28 Aligned_cols=239 Identities=15% Similarity=0.137 Sum_probs=141.5
Q ss_pred CCcceEEEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC
Q 000293 182 GKLEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPL 261 (1712)
Q Consensus 182 p~v~YrRe~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~l 261 (1712)
+.++--+..++.-+|.+|.. |+.-+. .+.+..|.||-.||..|+.... ..+. .....||.|+++|-||.|.|..
T Consensus 52 ~~ve~ydvTf~g~~g~rI~g-wlvlP~--~~~~~~P~vV~fhGY~g~~g~~--~~~l-~wa~~Gyavf~MdvRGQg~~~~ 125 (321)
T COG3458 52 PRVEVYDVTFTGYGGARIKG-WLVLPR--HEKGKLPAVVQFHGYGGRGGEW--HDML-HWAVAGYAVFVMDVRGQGSSSQ 125 (321)
T ss_pred CceEEEEEEEeccCCceEEE-EEEeec--ccCCccceEEEEeeccCCCCCc--cccc-cccccceeEEEEecccCCCccc
Confidence 34444455677778999984 654322 1226679999999986543322 1122 3467899999999999998832
Q ss_pred CC--------------------CC-CcccCcHHHHHHHHHHHHhhCC--CCcEEEEEecHHHHHHHHHHHHcCCCCCccE
Q 000293 262 TT--------------------SR-LFTAADSDDICTAIQFIGKARP--WTTLMSVGWGYGANMLTKYLAEVGERTPLTA 318 (1712)
Q Consensus 262 ts--------------------pr-ly~a~~tdDL~aVLd~I~kryP--~spLvLVGhSMGG~IaL~YLge~ge~s~V~A 318 (1712)
.+ +. +|.-+...|+..+++.+....+ ..++.+.|.|-||.+++..++-.+ ++++
T Consensus 126 dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~---rik~ 202 (321)
T COG3458 126 DTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP---RIKA 202 (321)
T ss_pred cCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh---hhhc
Confidence 11 11 1112345788999998876654 459999999999999988777643 5888
Q ss_pred EEEecCCCC-hhhhhccCchhhHhHHHHHHHHHHHHHhhhhhhhccCCCCCHHHHhhhccHHHHHHHHhhhccchhcHHH
Q 000293 319 VTCIDNPFD-LEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIED 397 (1712)
Q Consensus 319 aVlIS~P~D-l~e~~~sl~~~~ly~~~La~~Lk~~L~~~~~lf~~~~~~~Die~IlkaktlrEFDd~~t~~~~Gf~sv~e 397 (1712)
++++-+-+. ....... .-...| ..+.+++++|... ....-.++.-||
T Consensus 203 ~~~~~Pfl~df~r~i~~-~~~~~y-----dei~~y~k~h~~~-----------e~~v~~TL~yfD--------------- 250 (321)
T COG3458 203 VVADYPFLSDFPRAIEL-ATEGPY-----DEIQTYFKRHDPK-----------EAEVFETLSYFD--------------- 250 (321)
T ss_pred ccccccccccchhheee-cccCcH-----HHHHHHHHhcCch-----------HHHHHHHHhhhh---------------
Confidence 877654432 2111110 000001 1223333433210 111112333232
Q ss_pred HHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCC-CeEEEEecCCCccccCCCCchhHHHHHHHHHHHHH
Q 000293 398 FYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENP-FTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSA 474 (1712)
Q Consensus 398 YYr~aS~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~nP-nv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~a 474 (1712)
..+..++|++|+|+.-| .|++|||.+. .+..+..+ ...+.+++.-.|..... ...+.+..|++.
T Consensus 251 ------~~n~A~RiK~pvL~svgL~D~vcpPstq-FA~yN~l~~~K~i~iy~~~aHe~~p~------~~~~~~~~~l~~ 316 (321)
T COG3458 251 ------IVNLAARIKVPVLMSVGLMDPVCPPSTQ-FAAYNALTTSKTIEIYPYFAHEGGPG------FQSRQQVHFLKI 316 (321)
T ss_pred ------hhhHHHhhccceEEeecccCCCCCChhh-HHHhhcccCCceEEEeeccccccCcc------hhHHHHHHHHHh
Confidence 22345689999999999 9999998653 23333333 34567777544655543 345567788764
No 97
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.74 E-value=3.2e-08 Score=112.85 Aligned_cols=106 Identities=20% Similarity=0.242 Sum_probs=74.6
Q ss_pred CCCcEEEEeCCCCCCChhHHHHHHHHHHH-hCCcEEEEEcCCCCCCCCCCCCCCccc-CcHHHHHHHHHHHHhhCCCCcE
Q 000293 214 GLDTTLLLVPGTAEGSIEKRIRLFVCEAL-RRGFFPVVMNPRGCGGSPLTTSRLFTA-ADSDDICTAIQFIGKARPWTTL 291 (1712)
Q Consensus 214 ~~~PtVVLLHGltGGS~~sYir~La~~Ll-q~GYrVVVfD~RGhGgS~ltsprly~a-~~tdDL~aVLd~I~kryP~spL 291 (1712)
..+|.++++||. |.|.-+ +..++..+. ....+|+++|+||||.+......-... ....|+-++|.++-...| .++
T Consensus 72 t~gpil~l~HG~-G~S~LS-fA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~-~~i 148 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALS-FAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELP-PQI 148 (343)
T ss_pred CCccEEEEeecC-cccchh-HHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCC-Cce
Confidence 357899999995 434433 455666654 356889999999999997665544333 345788888888754333 479
Q ss_pred EEEEecHHHHHHHHHHHHcCCCCCccEEEEec
Q 000293 292 MSVGWGYGANMLTKYLAEVGERTPLTAVTCID 323 (1712)
Q Consensus 292 vLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS 323 (1712)
++|||||||.|+...+...-- ..+.|++.|.
T Consensus 149 ilVGHSmGGaIav~~a~~k~l-psl~Gl~viD 179 (343)
T KOG2564|consen 149 ILVGHSMGGAIAVHTAASKTL-PSLAGLVVID 179 (343)
T ss_pred EEEeccccchhhhhhhhhhhc-hhhhceEEEE
Confidence 999999999999777765322 2377777763
No 98
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.70 E-value=1.7e-07 Score=116.94 Aligned_cols=140 Identities=17% Similarity=0.047 Sum_probs=100.9
Q ss_pred ceEEEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCCh---hHHHHHHHH---HHHhCCcEEEEEcCCCCCC
Q 000293 185 EYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSI---EKRIRLFVC---EALRRGFFPVVMNPRGCGG 258 (1712)
Q Consensus 185 ~YrRe~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~---~sYir~La~---~Llq~GYrVVVfD~RGhGg 258 (1712)
-++.+.+.+.||.+|+.|.+.|. ..+..|+++..+=++-... ......+.. .++.+||.||..|-||+|+
T Consensus 18 ~~~~v~V~MRDGvrL~~dIy~Pa----~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~ 93 (563)
T COG2936 18 IERDVMVPMRDGVRLAADIYRPA----GAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGG 93 (563)
T ss_pred eeeeeeEEecCCeEEEEEEEccC----CCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEeccccccc
Confidence 34556799999999999977652 2356788888871111111 011222334 5788999999999999999
Q ss_pred CCCCCCCCcccCcHHHHHHHHHHHHhh-CCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhh
Q 000293 259 SPLTTSRLFTAADSDDICTAIQFIGKA-RPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEA 331 (1712)
Q Consensus 259 S~ltsprly~a~~tdDL~aVLd~I~kr-yP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~ 331 (1712)
|.......++ ...+|-..+|+||.++ +-+.++..+|.|++|...+..|+..+. .+++++..++.+|....
T Consensus 94 SeG~~~~~~~-~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pP--aLkai~p~~~~~D~y~d 164 (563)
T COG2936 94 SEGVFDPESS-REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPP--ALKAIAPTEGLVDRYRD 164 (563)
T ss_pred CCcccceecc-ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCc--hheeecccccccccccc
Confidence 9866555555 4568999999999874 225689999999999998888887654 48888888888886544
No 99
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.69 E-value=3.4e-08 Score=108.37 Aligned_cols=102 Identities=19% Similarity=0.172 Sum_probs=70.7
Q ss_pred EEEeCCCCCC--ChhHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhh-----CCCCc
Q 000293 219 LLLVPGTAEG--SIEKRIRLFVCEALR-RGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKA-----RPWTT 290 (1712)
Q Consensus 219 VVLLHGltGG--S~~sYir~La~~Llq-~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kr-----yP~sp 290 (1712)
||++||+..- +... ...++..+++ .||.|+++|||=+ |..-.....+|+.++++|+.+. ++..+
T Consensus 1 v~~~HGGg~~~g~~~~-~~~~~~~la~~~g~~v~~~~Yrl~-------p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~ 72 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKES-HWPFAARLAAERGFVVVSIDYRLA-------PEAPFPAALEDVKAAYRWLLKNADKLGIDPER 72 (211)
T ss_dssp EEEE--STTTSCGTTT-HHHHHHHHHHHHTSEEEEEE---T-------TTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CEEECCcccccCChHH-HHHHHHHHHhhccEEEEEeecccc-------ccccccccccccccceeeeccccccccccccc
Confidence 7899996432 2222 3445666664 8999999999933 2211234579999999999887 56679
Q ss_pred EEEEEecHHHHHHHHHHHHcCCC--CCccEEEEecCCCCh
Q 000293 291 LMSVGWGYGANMLTKYLAEVGER--TPLTAVTCIDNPFDL 328 (1712)
Q Consensus 291 LvLVGhSMGG~IaL~YLge~ge~--s~V~AaVlIS~P~Dl 328 (1712)
++++|+|-||++++.++....+. ..+++++++++..++
T Consensus 73 i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 73 IVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred eEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 99999999999999988764332 358999999997766
No 100
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.68 E-value=7.7e-07 Score=105.91 Aligned_cols=112 Identities=16% Similarity=0.146 Sum_probs=77.3
Q ss_pred CCcEEEEeCCCCCCChhH---------HHHHHHH---HHHhCCcEEEEEcCCCCC-CCCCCC---C--CCccc----CcH
Q 000293 215 LDTTLLLVPGTAEGSIEK---------RIRLFVC---EALRRGFFPVVMNPRGCG-GSPLTT---S--RLFTA----ADS 272 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~s---------Yir~La~---~Llq~GYrVVVfD~RGhG-gS~lts---p--rly~a----~~t 272 (1712)
....||+|||++|.++.. ||..++- .+--..|.|+++|.-|.+ +|..+. + +.|.. -.+
T Consensus 50 ~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti 129 (368)
T COG2021 50 KDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITI 129 (368)
T ss_pred CCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccH
Confidence 357899999998744321 4544431 122345999999999976 553221 1 12222 245
Q ss_pred HHHHHHHHHHHhhCCCCcEE-EEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCCh
Q 000293 273 DDICTAIQFIGKARPWTTLM-SVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDL 328 (1712)
Q Consensus 273 dDL~aVLd~I~kryP~spLv-LVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl 328 (1712)
+|...+-..+.++.+..++. +||-||||+.++.++..+++ .+..++.|+++...
T Consensus 130 ~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd--~V~~~i~ia~~~r~ 184 (368)
T COG2021 130 RDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPD--RVRRAIPIATAARL 184 (368)
T ss_pred HHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChH--HHhhhheecccccC
Confidence 77777777777888888886 89999999999999999987 57777777665543
No 101
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.65 E-value=3.9e-07 Score=101.79 Aligned_cols=181 Identities=14% Similarity=0.051 Sum_probs=93.0
Q ss_pred CCCCcEEEEeCCCCCCChhHHHHHHHH-HHHhCCcEEEEEcCCC------CCC---C--CCCCCCCcccCcHHH------
Q 000293 213 HGLDTTLLLVPGTAEGSIEKRIRLFVC-EALRRGFFPVVMNPRG------CGG---S--PLTTSRLFTAADSDD------ 274 (1712)
Q Consensus 213 ~~~~PtVVLLHGltGGS~~sYir~La~-~Llq~GYrVVVfD~RG------hGg---S--~ltsprly~a~~tdD------ 274 (1712)
....++||++||+ |++. ..+..+.. .+....++++.++-+- .|. + +..........+.++
T Consensus 11 ~~~~~lvi~LHG~-G~~~-~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~ 88 (216)
T PF02230_consen 11 GKAKPLVILLHGY-GDSE-DLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAE 88 (216)
T ss_dssp ST-SEEEEEE--T-TS-H-HHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHH
T ss_pred CCCceEEEEECCC-CCCc-chhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHH
Confidence 3457899999997 4444 33333332 2233567788776642 121 1 000000000012223
Q ss_pred -HHHHHHHHHh-hCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhHhHHHHHHHHHHH
Q 000293 275 -ICTAIQFIGK-ARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDI 352 (1712)
Q Consensus 275 -L~aVLd~I~k-ryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~~La~~Lk~~ 352 (1712)
+.++|+...+ ..+..++++.|||.||++++.++..++. ++.+++++|+.+-.....
T Consensus 89 ~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~--~~~gvv~lsG~~~~~~~~-------------------- 146 (216)
T PF02230_consen 89 RLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPE--PLAGVVALSGYLPPESEL-------------------- 146 (216)
T ss_dssp HHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSS--TSSEEEEES---TTGCCC--------------------
T ss_pred HHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCc--CcCEEEEeeccccccccc--------------------
Confidence 3334443222 2356799999999999999999988765 789999887654221000
Q ss_pred HHhhhhhhhccCCCCCHHHHhhhccHHHHHHHHhhhccchhcHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChH
Q 000293 353 LRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIP 431 (1712)
Q Consensus 353 L~~~~~lf~~~~~~~Die~IlkaktlrEFDd~~t~~~~Gf~sv~eYYr~aS~~~~L~kIkVPtLII~G-DDp~VP~~aip 431 (1712)
. ....... ++|++++|| +|+++|.....
T Consensus 147 --------~-----------------------------------------~~~~~~~--~~pi~~~hG~~D~vvp~~~~~ 175 (216)
T PF02230_consen 147 --------E-----------------------------------------DRPEALA--KTPILIIHGDEDPVVPFEWAE 175 (216)
T ss_dssp --------H-----------------------------------------CCHCCCC--TS-EEEEEETT-SSSTHHHHH
T ss_pred --------c-----------------------------------------ccccccC--CCcEEEEecCCCCcccHHHHH
Confidence 0 0000011 689999999 99999964322
Q ss_pred ---HHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHH
Q 000293 432 ---RSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAV 475 (1712)
Q Consensus 432 ---~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av 475 (1712)
..+.+...++++..+++++|..-. . ..+.+.+||++.
T Consensus 176 ~~~~~L~~~~~~v~~~~~~g~gH~i~~-----~--~~~~~~~~l~~~ 215 (216)
T PF02230_consen 176 KTAEFLKAAGANVEFHEYPGGGHEISP-----E--ELRDLREFLEKH 215 (216)
T ss_dssp HHHHHHHCTT-GEEEEEETT-SSS--H-----H--HHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEEcCCCCCCCCH-----H--HHHHHHHHHhhh
Confidence 233344557999999988883332 2 347788898753
No 102
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.61 E-value=1.1e-06 Score=99.12 Aligned_cols=228 Identities=16% Similarity=0.201 Sum_probs=112.2
Q ss_pred EEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCC-CCCCCCCCCC
Q 000293 188 RVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGC-GGSPLTTSRL 266 (1712)
Q Consensus 188 Re~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGh-GgS~ltsprl 266 (1712)
...+.+.||..+.+ |...|.. ......++||+.+|++ -.+..| ..++.+++.+||+|+.||.--| |.|...-..+
T Consensus 4 dhvi~~~~~~~I~v-wet~P~~-~~~~~~~tiliA~Gf~-rrmdh~-agLA~YL~~NGFhViRyDsl~HvGlSsG~I~ef 79 (294)
T PF02273_consen 4 DHVIRLEDGRQIRV-WETRPKN-NEPKRNNTILIAPGFA-RRMDHF-AGLAEYLSANGFHVIRYDSLNHVGLSSGDINEF 79 (294)
T ss_dssp EEEEEETTTEEEEE-EEE---T-TS---S-EEEEE-TT--GGGGGG-HHHHHHHHTTT--EEEE---B------------
T ss_pred cceeEcCCCCEEEE-eccCCCC-CCcccCCeEEEecchh-HHHHHH-HHHHHHHhhCCeEEEeccccccccCCCCChhhc
Confidence 35678999999986 7665432 2333468999999983 355554 5689999999999999999987 6665443332
Q ss_pred cccCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhHhHHHHH
Q 000293 267 FTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLA 346 (1712)
Q Consensus 267 y~a~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~~La 346 (1712)
....-.+|+..+++|++ +.+..++.++.-|+-|-|+...+++. .+.-++..-...++..+..
T Consensus 80 tms~g~~sL~~V~dwl~-~~g~~~~GLIAaSLSaRIAy~Va~~i----~lsfLitaVGVVnlr~TLe------------- 141 (294)
T PF02273_consen 80 TMSIGKASLLTVIDWLA-TRGIRRIGLIAASLSARIAYEVAADI----NLSFLITAVGVVNLRDTLE------------- 141 (294)
T ss_dssp -HHHHHHHHHHHHHHHH-HTT---EEEEEETTHHHHHHHHTTTS------SEEEEES--S-HHHHHH-------------
T ss_pred chHHhHHHHHHHHHHHH-hcCCCcchhhhhhhhHHHHHHHhhcc----CcceEEEEeeeeeHHHHHH-------------
Confidence 22234589999999999 45667899999999999999988753 2444444434444443221
Q ss_pred HHHH-HHHHhhhhhhhccCCCCCHHHHhhhccHHHH-HHHHhhhccchhcHHHHHhhcCcchhcCcCCccEEEEEe-CCC
Q 000293 347 NGLI-DILRSNKELFKGRAKGFDVEKALSAKSVRDF-EKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAG 423 (1712)
Q Consensus 347 ~~Lk-~~L~~~~~lf~~~~~~~Die~IlkaktlrEF-Dd~~t~~~~Gf~sv~eYYr~aS~~~~L~kIkVPtLII~G-DDp 423 (1712)
+.+. +++.....-++. ..|.+.. ... ..-| .+++ -.||.+.. +..+.+.++.+|++..+| +|.
T Consensus 142 ~al~~Dyl~~~i~~lp~---dldfeGh-~l~-~~vFv~dc~---e~~w~~l~------ST~~~~k~l~iP~iaF~A~~D~ 207 (294)
T PF02273_consen 142 KALGYDYLQLPIEQLPE---DLDFEGH-NLG-AEVFVTDCF---EHGWDDLD------STINDMKRLSIPFIAFTANDDD 207 (294)
T ss_dssp HHHSS-GGGS-GGG--S---EEEETTE-EEE-HHHHHHHHH---HTT-SSHH------HHHHHHTT--S-EEEEEETT-T
T ss_pred HHhccchhhcchhhCCC---ccccccc-ccc-hHHHHHHHH---HcCCccch------hHHHHHhhCCCCEEEEEeCCCc
Confidence 1110 111111111111 1111100 000 0011 1111 23444332 345678899999999999 888
Q ss_pred CCCCCChHHHH-HhcCCCeEEEEecCCCc
Q 000293 424 AVPPFSIPRSS-IAENPFTSLLLCSCLPS 451 (1712)
Q Consensus 424 ~VP~~aip~~l-a~~nPnv~LvLt~gGHH 451 (1712)
.|-...+.... ....+.+.+...+|..|
T Consensus 208 WV~q~eV~~~~~~~~s~~~klysl~Gs~H 236 (294)
T PF02273_consen 208 WVKQSEVEELLDNINSNKCKLYSLPGSSH 236 (294)
T ss_dssp TS-HHHHHHHHTT-TT--EEEEEETT-SS
T ss_pred cccHHHHHHHHHhcCCCceeEEEecCccc
Confidence 88655443222 12456788888899988
No 103
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.54 E-value=1.2e-06 Score=93.47 Aligned_cols=164 Identities=14% Similarity=0.160 Sum_probs=112.4
Q ss_pred CcEEEEeCCCCCCChhH-HHHHHHHHHHhCCcEEEEEcCCCCCCC--CCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEE
Q 000293 216 DTTLLLVPGTAEGSIEK-RIRLFVCEALRRGFFPVVMNPRGCGGS--PLTTSRLFTAADSDDICTAIQFIGKARPWTTLM 292 (1712)
Q Consensus 216 ~PtVVLLHGltGGS~~s-Yir~La~~Llq~GYrVVVfD~RGhGgS--~ltsprly~a~~tdDL~aVLd~I~kryP~spLv 292 (1712)
..+||+-||- |+++++ .+...+..++.+||.|+.|+++--..- ....|..-....-.....++..++......|++
T Consensus 14 ~~tilLaHGA-GasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi 92 (213)
T COG3571 14 PVTILLAHGA-GASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLI 92 (213)
T ss_pred CEEEEEecCC-CCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCcee
Confidence 4578899994 778776 688888899999999999998643211 111111111112234555666676665556999
Q ss_pred EEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhHhHHHHHHHHHHHHHhhhhhhhccCCCCCHHHH
Q 000293 293 SVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKA 372 (1712)
Q Consensus 293 LVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~~La~~Lk~~L~~~~~lf~~~~~~~Die~I 372 (1712)
+=|+||||-++...+.+-.. +|.+++|++-||....-..
T Consensus 93 ~GGkSmGGR~aSmvade~~A--~i~~L~clgYPfhppGKPe--------------------------------------- 131 (213)
T COG3571 93 IGGKSMGGRVASMVADELQA--PIDGLVCLGYPFHPPGKPE--------------------------------------- 131 (213)
T ss_pred eccccccchHHHHHHHhhcC--CcceEEEecCccCCCCCcc---------------------------------------
Confidence 99999999999888877543 5999999987775421000
Q ss_pred hhhccHHHHHHHHhhhccchhcHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCc
Q 000293 373 LSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPS 451 (1712)
Q Consensus 373 lkaktlrEFDd~~t~~~~Gf~sv~eYYr~aS~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH 451 (1712)
+.+ ...|..+++|+||.|| .|+|-..+.+.. ....+.++++...++.|
T Consensus 132 -~~R----------------------------t~HL~gl~tPtli~qGtrD~fGtr~~Va~--y~ls~~iev~wl~~adH 180 (213)
T COG3571 132 -QLR----------------------------TEHLTGLKTPTLITQGTRDEFGTRDEVAG--YALSDPIEVVWLEDADH 180 (213)
T ss_pred -cch----------------------------hhhccCCCCCeEEeecccccccCHHHHHh--hhcCCceEEEEeccCcc
Confidence 000 1346678899999999 999876554432 34678899999999888
Q ss_pred c
Q 000293 452 S 452 (1712)
Q Consensus 452 ~ 452 (1712)
-
T Consensus 181 D 181 (213)
T COG3571 181 D 181 (213)
T ss_pred c
Confidence 3
No 104
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.53 E-value=3.2e-06 Score=99.44 Aligned_cols=130 Identities=15% Similarity=0.101 Sum_probs=89.2
Q ss_pred EcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCC--CChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCccc
Q 000293 192 NTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAE--GSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTA 269 (1712)
Q Consensus 192 tt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltG--GS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a 269 (1712)
...++..+.++++.+. .......|+||++||... |+...+.......+...||.|+++|||=.-. ....
T Consensus 57 ~~~~~~~~~~~~y~p~--~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe-------~~~p 127 (312)
T COG0657 57 AGPSGDGVPVRVYRPD--RKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPE-------HPFP 127 (312)
T ss_pred cCCCCCceeEEEECCC--CCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCC-------CCCC
Confidence 4455555667888651 112335799999999532 2223333445566778999999999994422 2223
Q ss_pred CcHHHHHHHHHHHHhhC-----CCCcEEEEEecHHHHHHHHHHHHcCCC--CCccEEEEecCCCChhh
Q 000293 270 ADSDDICTAIQFIGKAR-----PWTTLMSVGWGYGANMLTKYLAEVGER--TPLTAVTCIDNPFDLEE 330 (1712)
Q Consensus 270 ~~tdDL~aVLd~I~kry-----P~spLvLVGhSMGG~IaL~YLge~ge~--s~V~AaVlIS~P~Dl~e 330 (1712)
...+|+.+++.++.... ...+|+++|+|-||++++.++..-.++ ....+.+++++..+...
T Consensus 128 ~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 128 AALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred chHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc
Confidence 45789999999998653 257899999999999998877654322 34678888888777764
No 105
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.50 E-value=1e-06 Score=96.23 Aligned_cols=89 Identities=12% Similarity=0.038 Sum_probs=56.3
Q ss_pred EEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhC--CCCcEEEEEe
Q 000293 219 LLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKAR--PWTTLMSVGW 296 (1712)
Q Consensus 219 VVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kry--P~spLvLVGh 296 (1712)
|+|+||+.++....|...+...+... ++|-..|+ . .| |+.+-+..+.+.. ...+.++|||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~----~----~P---------~~~~W~~~l~~~i~~~~~~~ilVaH 62 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW----D----NP---------DLDEWVQALDQAIDAIDEPTILVAH 62 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC------T----S-----------HHHHHHHHHHCCHC-TTTEEEEEE
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc----C----CC---------CHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 78999996655555666677777666 88887776 1 12 2333334443321 2357999999
Q ss_pred cHHHHHHHHHHHHcCCCCCccEEEEecCCC
Q 000293 297 GYGANMLTKYLAEVGERTPLTAVTCIDNPF 326 (1712)
Q Consensus 297 SMGG~IaL~YLge~ge~s~V~AaVlIS~P~ 326 (1712)
|+|...+++|++.. ...+|.|+++++++.
T Consensus 63 SLGc~~~l~~l~~~-~~~~v~g~lLVAp~~ 91 (171)
T PF06821_consen 63 SLGCLTALRWLAEQ-SQKKVAGALLVAPFD 91 (171)
T ss_dssp THHHHHHHHHHHHT-CCSSEEEEEEES--S
T ss_pred CHHHHHHHHHHhhc-ccccccEEEEEcCCC
Confidence 99999999999732 345899999998774
No 106
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.50 E-value=1.7e-06 Score=113.31 Aligned_cols=234 Identities=18% Similarity=0.153 Sum_probs=146.4
Q ss_pred CCcceEEEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChh---HHHHHHHH-HHHhCCcEEEEEcCCCCC
Q 000293 182 GKLEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIE---KRIRLFVC-EALRRGFFPVVMNPRGCG 257 (1712)
Q Consensus 182 p~v~YrRe~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~---sYir~La~-~Llq~GYrVVVfD~RGhG 257 (1712)
|...|.+..+ ||....+....|++. .....-|.||.+||.++ |.. .+...+.. .+...||.|+.+|.||.|
T Consensus 496 p~~~~~~i~~---~~~~~~~~~~lP~~~-~~~~kyPllv~~yGGP~-sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~ 570 (755)
T KOG2100|consen 496 PIVEFGKIEI---DGITANAILILPPNF-DPSKKYPLLVVVYGGPG-SQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSG 570 (755)
T ss_pred CcceeEEEEe---ccEEEEEEEecCCCC-CCCCCCCEEEEecCCCC-cceeeeeEEecHHHHhhccCCeEEEEEcCCCcC
Confidence 4455554444 777776655544332 23346788999999875 221 12111222 467899999999999999
Q ss_pred CCCCCC----CCCcccCcHHHHHHHHHHHHhhC--CCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhh
Q 000293 258 GSPLTT----SRLFTAADSDDICTAIQFIGKAR--PWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEA 331 (1712)
Q Consensus 258 gS~lts----prly~a~~tdDL~aVLd~I~kry--P~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~ 331 (1712)
+....- ++-......+|...++.++.+.. ...++.++|||.||.+.++.++..+. .-+++++++.|..+.. .
T Consensus 571 ~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~-~~fkcgvavaPVtd~~-~ 648 (755)
T KOG2100|consen 571 GYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPG-DVFKCGVAVAPVTDWL-Y 648 (755)
T ss_pred CcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcC-ceEEEEEEecceeeee-e
Confidence 874321 22223346789999998887654 23589999999999999999988653 2577779998887764 1
Q ss_pred hccCchhhHhHHHHHHHHHHHHHhhhhhhhccCCCCCHHHHhhhccHHHHHHHHhhhccchhc-HHHHHhhcCcchhcCc
Q 000293 332 TRSSPHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEA-IEDFYSKSSTRSVVGN 410 (1712)
Q Consensus 332 ~~sl~~~~ly~~~La~~Lk~~L~~~~~lf~~~~~~~Die~IlkaktlrEFDd~~t~~~~Gf~s-v~eYYr~aS~~~~L~k 410 (1712)
... ..+.. + .|+++ ...-|...+....+..
T Consensus 649 yds---------~~ter------------------------------------y----mg~p~~~~~~y~e~~~~~~~~~ 679 (755)
T KOG2100|consen 649 YDS---------TYTER------------------------------------Y----MGLPSENDKGYEESSVSSPANN 679 (755)
T ss_pred ecc---------cccHh------------------------------------h----cCCCccccchhhhccccchhhh
Confidence 110 00000 0 01110 0111555666677778
Q ss_pred CCccE-EEEEe-CCCCCCCCC-hH--HHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHH
Q 000293 411 IKIPV-LFIQN-DAGAVPPFS-IP--RSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLS 473 (1712)
Q Consensus 411 IkVPt-LII~G-DDp~VP~~a-ip--~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~ 473 (1712)
++.|. |+||| .|+-|+... +. .++..+.-.+++.++++..|...... ....+...+..||.
T Consensus 680 ~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~--~~~~~~~~~~~~~~ 745 (755)
T KOG2100|consen 680 IKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVE--VISHLYEKLDRFLR 745 (755)
T ss_pred hccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCccccccc--chHHHHHHHHHHHH
Confidence 88887 99999 888887542 21 23333333389999999999666542 22345677888887
No 107
>KOG4130 consensus Prenyl protein protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.50 E-value=2.8e-06 Score=95.01 Aligned_cols=79 Identities=19% Similarity=0.115 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHhh-cCCchhhHHHHHHHhhhcC--------------------CcchHHHHHHHHHHHH
Q 000293 1571 TATVVVLVEELLFRSWLPEEIAAD-LDYHRGIIISGLAFALSQR--------------------SPQAIPGLWLLSLALA 1629 (1712)
Q Consensus 1571 vallvgi~EELLFRG~L~~~L~~~-~g~~~AiIISSLLFALlHl--------------------tl~~~i~lfLlGLvLa 1629 (1712)
-.+++|+.||++||..++..+... ++...|+.+.-++||+.|+ +..++....++|..-+
T Consensus 134 N~iiaPLtEElvfracmlp~~l~~~~s~l~avF~~PLfFGvAH~HHiyEqL~~g~~~~~~ilL~t~fQfsYTtlFG~yTa 213 (291)
T KOG4130|consen 134 NFIIAPLTEELVFRACMLPTYLNLIQSSLQAVFWQPLFFGVAHAHHIYEQLQEGSMTTVSILLTTCFQFSYTTLFGGYTA 213 (291)
T ss_pred hhhhccchHHHHHHHHHHHHHHHhhhcchhhHHHhhHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345679999999999999999887 8999999999999999998 1256778889999889
Q ss_pred HHHHhcCCcchHHHHHHhHHh
Q 000293 1630 GVRQRSQGSLSVPIGLRTGIM 1650 (1712)
Q Consensus 1630 ~ay~rttGSLWlpIGLHagWn 1650 (1712)
.++.| ||+||.||.+|+.=|
T Consensus 214 flF~r-Tghl~~~iLvHAfCN 233 (291)
T KOG4130|consen 214 FLFVR-TGHLWCPILVHAFCN 233 (291)
T ss_pred HHhhh-cCCchHHHHHHHHHh
Confidence 99999 789999999999655
No 108
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.44 E-value=1.2e-05 Score=93.22 Aligned_cols=133 Identities=15% Similarity=0.181 Sum_probs=88.0
Q ss_pred EEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCccc
Q 000293 190 CVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTA 269 (1712)
Q Consensus 190 ~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a 269 (1712)
-+...+|..+.++-... +..+......+||-+||-+| |+.. ++.+...|.+.|.|++..|+||+|.++......|+-
T Consensus 10 k~~~~~~~~~~~~a~y~-D~~~~gs~~gTVv~~hGsPG-SH~D-FkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n 86 (297)
T PF06342_consen 10 KFQAENGKIVTVQAVYE-DSLPSGSPLGTVVAFHGSPG-SHND-FKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTN 86 (297)
T ss_pred EcccccCceEEEEEEEE-ecCCCCCCceeEEEecCCCC-Cccc-hhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccCh
Confidence 35566787777763221 11112233458999999764 6654 455667889999999999999999987655444432
Q ss_pred C-cHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCC-CChhhhh
Q 000293 270 A-DSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNP-FDLEEAT 332 (1712)
Q Consensus 270 ~-~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P-~Dl~e~~ 332 (1712)
. ...=+.++++.|.- ...++++|||.|+-.++..+..+ ++.|+++++++ +....+.
T Consensus 87 ~er~~~~~~ll~~l~i---~~~~i~~gHSrGcenal~la~~~----~~~g~~lin~~G~r~HkgI 144 (297)
T PF06342_consen 87 EERQNFVNALLDELGI---KGKLIFLGHSRGCENALQLAVTH----PLHGLVLINPPGLRPHKGI 144 (297)
T ss_pred HHHHHHHHHHHHHcCC---CCceEEEEeccchHHHHHHHhcC----ccceEEEecCCccccccCc
Confidence 1 12223344444432 36899999999999999999886 36688888654 4444443
No 109
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.37 E-value=1.6e-06 Score=95.65 Aligned_cols=103 Identities=15% Similarity=0.183 Sum_probs=77.3
Q ss_pred cEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEEEEe
Q 000293 217 TTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGW 296 (1712)
Q Consensus 217 PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spLvLVGh 296 (1712)
..+||+.|= || ....-+.++..|+++|+-|+.+|-+=+=-+. ++| .....|+..+|++..++++..++++||+
T Consensus 3 t~~v~~SGD-gG-w~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~-rtP----~~~a~Dl~~~i~~y~~~w~~~~vvLiGY 75 (192)
T PF06057_consen 3 TLAVFFSGD-GG-WRDLDKQIAEALAKQGVPVVGVDSLRYFWSE-RTP----EQTAADLARIIRHYRARWGRKRVVLIGY 75 (192)
T ss_pred EEEEEEeCC-CC-chhhhHHHHHHHHHCCCeEEEechHHHHhhh-CCH----HHHHHHHHHHHHHHHHHhCCceEEEEee
Confidence 467888883 33 3456678999999999999999976543332 222 2346899999999999998899999999
Q ss_pred cHHHHHHHHHHHHcCC--CCCccEEEEecCCC
Q 000293 297 GYGANMLTKYLAEVGE--RTPLTAVTCIDNPF 326 (1712)
Q Consensus 297 SMGG~IaL~YLge~ge--~s~V~AaVlIS~P~ 326 (1712)
|+|+-++-....+-+. +.+|..++++++.-
T Consensus 76 SFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 76 SFGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred cCCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 9999887766666553 24688888886553
No 110
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.35 E-value=4.4e-06 Score=103.37 Aligned_cols=236 Identities=14% Similarity=0.149 Sum_probs=140.9
Q ss_pred CCcceEE-EE--EEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCCh-------hHHHHHHHHHHHhCCcEEEEE
Q 000293 182 GKLEYQR-VC--VNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSI-------EKRIRLFVCEALRRGFFPVVM 251 (1712)
Q Consensus 182 p~v~YrR-e~--Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~-------~sYir~La~~Llq~GYrVVVf 251 (1712)
++..|-. ++ +++.-|.++..-.+.|.+ .......|+|+.+-|+++-.. ..|+| ...|++.||-||++
T Consensus 606 ~~Pdy~p~eif~fqs~tg~~lYgmiyKPhn-~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR--~~~LaslGy~Vv~I 682 (867)
T KOG2281|consen 606 PPPDYVPPEIFSFQSKTGLTLYGMIYKPHN-FQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLR--FCRLASLGYVVVFI 682 (867)
T ss_pred CCCccCChhheeeecCCCcEEEEEEEcccc-CCCCCCCceEEEEcCCCceEEeeccccceehhh--hhhhhhcceEEEEE
Confidence 4455544 33 477444444433444433 223345799999999754210 11444 45788999999999
Q ss_pred cCCCCCCCCCCCCCC--cccC--cHHHHHHHHHHHHhhCC---CCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecC
Q 000293 252 NPRGCGGSPLTTSRL--FTAA--DSDDICTAIQFIGKARP---WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDN 324 (1712)
Q Consensus 252 D~RGhGgS~ltsprl--y~a~--~tdDL~aVLd~I~kryP---~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~ 324 (1712)
|.||...-.+.-... ...+ ..+|-.+.++++..+++ -.++.+-|||+||.+.+..+.++++ -+++|| .++
T Consensus 683 DnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~--IfrvAI-AGa 759 (867)
T KOG2281|consen 683 DNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPN--IFRVAI-AGA 759 (867)
T ss_pred cCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcc--eeeEEe-ccC
Confidence 999976543322111 1122 35888899999998874 3589999999999999999999875 244333 333
Q ss_pred CCChhhhhccCchhhHhHHHHHHHHHHHHHhhhhhhhccCCCCCHHHHhhhccHHHHHHHHhhhccchh-cHHHHHhhcC
Q 000293 325 PFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFE-AIEDFYSKSS 403 (1712)
Q Consensus 325 P~Dl~e~~~sl~~~~ly~~~La~~Lk~~L~~~~~lf~~~~~~~Die~IlkaktlrEFDd~~t~~~~Gf~-sv~eYYr~aS 403 (1712)
|-..+. +|+-. +|.+.-|++ .-++-|...|
T Consensus 760 pVT~W~---------~YDTg----------------------------------------YTERYMg~P~~nE~gY~agS 790 (867)
T KOG2281|consen 760 PVTDWR---------LYDTG----------------------------------------YTERYMGYPDNNEHGYGAGS 790 (867)
T ss_pred cceeee---------eeccc----------------------------------------chhhhcCCCccchhcccchh
Confidence 322111 11111 111111222 1111122222
Q ss_pred cc---hhcCcCCccEEEEEe-CCCCCCCCChHH---HHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHH
Q 000293 404 TR---SVVGNIKIPVLFIQN-DAGAVPPFSIPR---SSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSA 474 (1712)
Q Consensus 404 ~~---~~L~kIkVPtLII~G-DDp~VP~~aip~---~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~a 474 (1712)
.. ..++.=.--+|+||| -|.-|...+..+ ++.+....-+++++|.-.|..-. .+...+++..++.|++.
T Consensus 791 V~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~--~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 791 VAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRN--PESGIYYEARLLHFLQE 866 (867)
T ss_pred HHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCC--CccchhHHHHHHHHHhh
Confidence 22 234444456899999 888887655433 45566777899999998884433 23455788999999874
No 111
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.32 E-value=2e-06 Score=82.78 Aligned_cols=63 Identities=19% Similarity=0.201 Sum_probs=45.5
Q ss_pred CCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCccc-CcHHHHHHHH
Q 000293 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTA-ADSDDICTAI 279 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a-~~tdDL~aVL 279 (1712)
.+.+|+|+||+.+ +...+..++..|.++||.|+++|+||||.|.......-.. ...+|+..++
T Consensus 15 ~k~~v~i~HG~~e--h~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 15 PKAVVVIVHGFGE--HSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CCEEEEEeCCcHH--HHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 4789999999843 3345678999999999999999999999997433222111 2346666554
No 112
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.30 E-value=2.9e-06 Score=102.20 Aligned_cols=254 Identities=17% Similarity=0.162 Sum_probs=143.5
Q ss_pred CCcEEEEeCCCCCCChhHHH------HHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcH-HHHHHHHHHHHhhCC
Q 000293 215 LDTTLLLVPGTAEGSIEKRI------RLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADS-DDICTAIQFIGKARP 287 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYi------r~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~t-dDL~aVLd~I~kryP 287 (1712)
-.++++++|-+.. ..|+ +.++..|+++|+.|+++++|+=..+.. +.-...+. +++.++|+.+++..+
T Consensus 106 ~~~PlLiVpP~iN---k~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~---~~~~edYi~e~l~~aid~v~~itg 179 (445)
T COG3243 106 LKRPLLIVPPWIN---KFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA---AKNLEDYILEGLSEAIDTVKDITG 179 (445)
T ss_pred CCCceEeeccccC---ceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh---hccHHHHHHHHHHHHHHHHHHHhC
Confidence 3578999998632 3342 568899999999999999997654432 11112333 788899999998888
Q ss_pred CCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhcc-CchhhHhHHHHHHHH--HHH-----HHhhhhh
Q 000293 288 WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRS-SPHHIALDEKLANGL--IDI-----LRSNKEL 359 (1712)
Q Consensus 288 ~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~s-l~~~~ly~~~La~~L--k~~-----L~~~~~l 359 (1712)
...+.++||+.||+++..+++.++.+ +|+.++.+.+++|+...... .......-..+...+ ..+ +..-..+
T Consensus 180 ~~~InliGyCvGGtl~~~ala~~~~k-~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~m 258 (445)
T COG3243 180 QKDINLIGYCVGGTLLAAALALMAAK-RIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFL 258 (445)
T ss_pred ccccceeeEecchHHHHHHHHhhhhc-ccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHh
Confidence 88999999999999999999988764 69999999999998754321 111100000000000 000 0000000
Q ss_pred hhcc--CCCCCHHHHhhhccHHHHHHHH--------hhhccchhcHHHHHhhcCc----------chhcCcCCccEEEEE
Q 000293 360 FKGR--AKGFDVEKALSAKSVRDFEKAI--------SMVSYGFEAIEDFYSKSST----------RSVVGNIKIPVLFIQ 419 (1712)
Q Consensus 360 f~~~--~~~~Die~IlkaktlrEFDd~~--------t~~~~Gf~sv~eYYr~aS~----------~~~L~kIkVPtLII~ 419 (1712)
+.+. ...+..+..+..+....||-.+ ..+.+++ -..++|..... .=.+++|+||++++.
T Consensus 259 Lrpndliw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~-~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~pvy~~a 337 (445)
T COG3243 259 LRPNDLIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSE-YLRNFYLENRLIRGGLEVSGTMVDLGDITCPVYNLA 337 (445)
T ss_pred cCccccchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHH-HHHHHHHhChhhccceEECCEEechhhcccceEEEe
Confidence 0000 0001111111111112232211 1111111 02233333221 234789999999999
Q ss_pred e-CCCCCCCCChHHHHHhcCCC-eEEEEecCCCccccCCCCc---hhHHH--HHHHHHHHHHHHh
Q 000293 420 N-DAGAVPPFSIPRSSIAENPF-TSLLLCSCLPSSVIGGGRA---AESWC--QNLVIEWLSAVEL 477 (1712)
Q Consensus 420 G-DDp~VP~~aip~~la~~nPn-v~LvLt~gGHH~gF~e~~~---~~sWv--~r~VlEFL~av~~ 477 (1712)
| +|.++|..++-.- .+..++ +.+++.+.||-.+....+. ...|. .....+||.....
T Consensus 338 ~~~DhI~P~~Sv~~g-~~l~~g~~~f~l~~sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a~~ 401 (445)
T COG3243 338 AEEDHIAPWSSVYLG-ARLLGGEVTFVLSRSGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGAKE 401 (445)
T ss_pred ecccccCCHHHHHHH-HHhcCCceEEEEecCceEEEEeCCcchhhhhcCCCCcchHHHHHHhhcc
Confidence 9 8999998765432 334444 7788888888777765321 12231 2356677766543
No 113
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.28 E-value=3e-05 Score=86.14 Aligned_cols=92 Identities=12% Similarity=0.074 Sum_probs=55.6
Q ss_pred EEEeCCCCCCChhHHHHHHHHHHHhCC--cEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEEEEe
Q 000293 219 LLLVPGTAEGSIEKRIRLFVCEALRRG--FFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGW 296 (1712)
Q Consensus 219 VVLLHGltGGS~~sYir~La~~Llq~G--YrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spLvLVGh 296 (1712)
|+.+|||..+....-.+.+..++.+.+ ..+.++|++-+ .++..+.+..+-.......+.+||.
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~~---------------p~~a~~~l~~~i~~~~~~~~~liGS 66 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPPF---------------PEEAIAQLEQLIEELKPENVVLIGS 66 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCcC---------------HHHHHHHHHHHHHhCCCCCeEEEEE
Confidence 789999965433333444556666655 34454444311 2333333333333344445999999
Q ss_pred cHHHHHHHHHHHHcCCCCCccEEEEecCCCChhh
Q 000293 297 GYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEE 330 (1712)
Q Consensus 297 SMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e 330 (1712)
||||..+..++.+++ +.+ |+|.|.+....
T Consensus 67 SlGG~~A~~La~~~~----~~a-vLiNPav~p~~ 95 (187)
T PF05728_consen 67 SLGGFYATYLAERYG----LPA-VLINPAVRPYE 95 (187)
T ss_pred ChHHHHHHHHHHHhC----CCE-EEEcCCCCHHH
Confidence 999999987776664 444 78877776543
No 114
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.28 E-value=2.5e-05 Score=86.81 Aligned_cols=102 Identities=16% Similarity=0.234 Sum_probs=71.5
Q ss_pred cEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHH-HHHHHHHHhhCCCCcEEEEE
Q 000293 217 TTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDI-CTAIQFIGKARPWTTLMSVG 295 (1712)
Q Consensus 217 PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL-~aVLd~I~kryP~spLvLVG 295 (1712)
++|+++||. +|+...| +.+++.+...++.|+.+.++|.+... + .....+++ ...++.|+...|..|++++|
T Consensus 1 ~~lf~~p~~-gG~~~~y-~~la~~l~~~~~~v~~i~~~~~~~~~---~---~~~si~~la~~y~~~I~~~~~~gp~~L~G 72 (229)
T PF00975_consen 1 RPLFCFPPA-GGSASSY-RPLARALPDDVIGVYGIEYPGRGDDE---P---PPDSIEELASRYAEAIRARQPEGPYVLAG 72 (229)
T ss_dssp -EEEEESST-TCSGGGG-HHHHHHHTTTEEEEEEECSTTSCTTS---H---EESSHHHHHHHHHHHHHHHTSSSSEEEEE
T ss_pred CeEEEEcCC-ccCHHHH-HHHHHhCCCCeEEEEEEecCCCCCCC---C---CCCCHHHHHHHHHHHhhhhCCCCCeeehc
Confidence 379999996 4565555 56887775556999999999997321 1 11223333 34667788778878999999
Q ss_pred ecHHHHHHHHHHHHcCCC-CCccEEEEecCCC
Q 000293 296 WGYGANMLTKYLAEVGER-TPLTAVTCIDNPF 326 (1712)
Q Consensus 296 hSMGG~IaL~YLge~ge~-s~V~AaVlIS~P~ 326 (1712)
||+||.++...|.+-.+. ..+..+++++++.
T Consensus 73 ~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 73 WSFGGILAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp ETHHHHHHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred cCccHHHHHHHHHHHHHhhhccCceEEecCCC
Confidence 999999998888663222 3578888887543
No 115
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.27 E-value=4.5e-06 Score=93.58 Aligned_cols=179 Identities=18% Similarity=0.228 Sum_probs=114.9
Q ss_pred cEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcC-CCCCCCCCCCCC--------CcccCcHHHHHHHHHHHHhhCC
Q 000293 217 TTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNP-RGCGGSPLTTSR--------LFTAADSDDICTAIQFIGKARP 287 (1712)
Q Consensus 217 PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~-RGhGgS~ltspr--------ly~a~~tdDL~aVLd~I~kryP 287 (1712)
..||++--+. |-.....+..+..++.+||.|+++|+ ||=--++..... .-......|+..++++|+.+++
T Consensus 40 ~~li~i~Dvf-G~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~ 118 (242)
T KOG3043|consen 40 KVLIVIQDVF-GFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGD 118 (242)
T ss_pred eEEEEEEeee-ccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCC
Confidence 3556655553 34455688899999999999999997 441112111110 1111235799999999998888
Q ss_pred CCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhHhHHHHHHHHHHHHHhhhhhhhccCCCC
Q 000293 288 WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRAKGF 367 (1712)
Q Consensus 288 ~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~~La~~Lk~~L~~~~~lf~~~~~~~ 367 (1712)
...|.++|+.|||.++..|....+ .+.++++.-+.+
T Consensus 119 ~kkIGv~GfCwGak~vv~~~~~~~---~f~a~v~~hps~----------------------------------------- 154 (242)
T KOG3043|consen 119 SKKIGVVGFCWGAKVVVTLSAKDP---EFDAGVSFHPSF----------------------------------------- 154 (242)
T ss_pred cceeeEEEEeecceEEEEeeccch---hheeeeEecCCc-----------------------------------------
Confidence 889999999999988776665543 355555431111
Q ss_pred CHHHHhhhccHHHHHHHHhhhccchhcHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHH--HHHhcCCCe--E
Q 000293 368 DVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPR--SSIAENPFT--S 442 (1712)
Q Consensus 368 Die~IlkaktlrEFDd~~t~~~~Gf~sv~eYYr~aS~~~~L~kIkVPtLII~G-DDp~VP~~aip~--~la~~nPnv--~ 442 (1712)
.+ ...+.++++|+|++.| .|.++|+..+.. +..+.+|.+ +
T Consensus 155 -------------------------~d----------~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~ 199 (242)
T KOG3043|consen 155 -------------------------VD----------SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQ 199 (242)
T ss_pred -------------------------CC----------hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCccccee
Confidence 00 1234577899999999 699999865432 233456654 5
Q ss_pred EEEecCCCccccCCC-----Cchh---HHHHHHHHHHHHHH
Q 000293 443 LLLCSCLPSSVIGGG-----RAAE---SWCQNLVIEWLSAV 475 (1712)
Q Consensus 443 LvLt~gGHH~gF~e~-----~~~~---sWv~r~VlEFL~av 475 (1712)
+.++++-||+|.-.+ +... ....+.+..||..+
T Consensus 200 v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 200 VKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred EEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 889999999887421 1111 22335667777654
No 116
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.25 E-value=1.3e-05 Score=91.21 Aligned_cols=87 Identities=15% Similarity=0.069 Sum_probs=58.4
Q ss_pred CCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHh----hCCCCc
Q 000293 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGK----ARPWTT 290 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~k----ryP~sp 290 (1712)
.++.++++|= +||+... ++.+...+-. -+.++++.++|+|.--.. + ...|+..+.+.|.. -++..|
T Consensus 6 ~~~~L~cfP~-AGGsa~~-fr~W~~~lp~-~iel~avqlPGR~~r~~e-p------~~~di~~Lad~la~el~~~~~d~P 75 (244)
T COG3208 6 ARLRLFCFPH-AGGSASL-FRSWSRRLPA-DIELLAVQLPGRGDRFGE-P------LLTDIESLADELANELLPPLLDAP 75 (244)
T ss_pred CCceEEEecC-CCCCHHH-HHHHHhhCCc-hhheeeecCCCcccccCC-c------ccccHHHHHHHHHHHhccccCCCC
Confidence 4567888885 5666554 4556655433 599999999999864211 1 12344444444432 345679
Q ss_pred EEEEEecHHHHHHHHHHHHcC
Q 000293 291 LMSVGWGYGANMLTKYLAEVG 311 (1712)
Q Consensus 291 LvLVGhSMGG~IaL~YLge~g 311 (1712)
+.++||||||+++...+.+..
T Consensus 76 ~alfGHSmGa~lAfEvArrl~ 96 (244)
T COG3208 76 FALFGHSMGAMLAFEVARRLE 96 (244)
T ss_pred eeecccchhHHHHHHHHHHHH
Confidence 999999999999999887643
No 117
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.25 E-value=1.2e-06 Score=105.07 Aligned_cols=137 Identities=15% Similarity=0.114 Sum_probs=75.9
Q ss_pred ceEEEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHH-----------------HHHHHHHHHhCCcE
Q 000293 185 EYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKR-----------------IRLFVCEALRRGFF 247 (1712)
Q Consensus 185 ~YrRe~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sY-----------------ir~La~~Llq~GYr 247 (1712)
..++..|.+.++..+....+.|.. ..+.-|.||++||-.++ .+.- -+.++.+|+++||-
T Consensus 87 ~~EKv~f~~~p~~~vpaylLvPd~---~~~p~PAVL~lHgHg~~-Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYV 162 (390)
T PF12715_consen 87 TREKVEFNTTPGSRVPAYLLVPDG---AKGPFPAVLCLHGHGGG-KEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYV 162 (390)
T ss_dssp EEEEEEE--STTB-EEEEEEEETT-----S-EEEEEEE--TT---HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSE
T ss_pred EEEEEEEEccCCeeEEEEEEecCC---CCCCCCEEEEeCCCCCC-cccccCCcccccccchhhccccccHHHHHHhCCCE
Confidence 345556777888887765454421 13456889999996333 2211 12467899999999
Q ss_pred EEEEcCCCCCCCCCCCCC----Ccc----------cC------cHHHHHHHHHHHHhhCC--CCcEEEEEecHHHHHHHH
Q 000293 248 PVVMNPRGCGGSPLTTSR----LFT----------AA------DSDDICTAIQFIGKARP--WTTLMSVGWGYGANMLTK 305 (1712)
Q Consensus 248 VVVfD~RGhGgS~ltspr----ly~----------a~------~tdDL~aVLd~I~kryP--~spLvLVGhSMGG~IaL~ 305 (1712)
|+++|.+|+|.-...... .+. .+ ...|...+++|+..+-- ..+|.++||||||..++.
T Consensus 163 vla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~ 242 (390)
T PF12715_consen 163 VLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWW 242 (390)
T ss_dssp EEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHH
T ss_pred EEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHH
Confidence 999999999976322110 000 01 12345558999976531 458999999999999777
Q ss_pred HHHHcCCCCCccEEEEecCCCCh
Q 000293 306 YLAEVGERTPLTAVTCIDNPFDL 328 (1712)
Q Consensus 306 YLge~ge~s~V~AaVlIS~P~Dl 328 (1712)
.++.. + +|+++|..+.....
T Consensus 243 LaALD-d--RIka~v~~~~l~~~ 262 (390)
T PF12715_consen 243 LAALD-D--RIKATVANGYLCTT 262 (390)
T ss_dssp HHHH--T--T--EEEEES-B--H
T ss_pred HHHcc-h--hhHhHhhhhhhhcc
Confidence 76664 3 58887776554433
No 118
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.22 E-value=2.9e-05 Score=90.39 Aligned_cols=108 Identities=20% Similarity=0.330 Sum_probs=77.5
Q ss_pred CcEEEEeCCCCCCChhHHHHHHHHHHHh---CCcEEEEEcCCCCCCCCCC-----CCCCcccCcHHHHHHHHHHHHh---
Q 000293 216 DTTLLLVPGTAEGSIEKRIRLFVCEALR---RGFFPVVMNPRGCGGSPLT-----TSRLFTAADSDDICTAIQFIGK--- 284 (1712)
Q Consensus 216 ~PtVVLLHGltGGS~~sYir~La~~Llq---~GYrVVVfD~RGhGgS~lt-----sprly~a~~tdDL~aVLd~I~k--- 284 (1712)
+..++++||-+| -. .|+..++..|.+ ..|.+++..+.||-.++.. ..+.|. ..+-+...++++++
T Consensus 2 ~~li~~IPGNPG-lv-~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~s--L~~QI~hk~~~i~~~~~ 77 (266)
T PF10230_consen 2 RPLIVFIPGNPG-LV-EFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFS--LQDQIEHKIDFIKELIP 77 (266)
T ss_pred cEEEEEECCCCC-hH-HHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccC--HHHHHHHHHHHHHHHhh
Confidence 468999999875 43 455667777774 4899999999999877543 223332 23344444444443
Q ss_pred hC--CCCcEEEEEecHHHHHHHHHHHHcC-CCCCccEEEEecCCCC
Q 000293 285 AR--PWTTLMSVGWGYGANMLTKYLAEVG-ERTPLTAVTCIDNPFD 327 (1712)
Q Consensus 285 ry--P~spLvLVGhSMGG~IaL~YLge~g-e~s~V~AaVlIS~P~D 327 (1712)
.+ +..+++++|||+|+.|+++.+.+.+ ...+|.+++++.|...
T Consensus 78 ~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 78 QKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred hhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc
Confidence 33 5679999999999999999999987 3457889999887653
No 119
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.21 E-value=1e-05 Score=93.71 Aligned_cols=115 Identities=17% Similarity=0.256 Sum_probs=72.8
Q ss_pred CCcEEEEeCCCCCCChhHHHHHHHHHHH-hCCcE----EEEEcCCCCCCC----CC--CCCC---Ccc--c-----CcHH
Q 000293 215 LDTTLLLVPGTAEGSIEKRIRLFVCEAL-RRGFF----PVVMNPRGCGGS----PL--TTSR---LFT--A-----ADSD 273 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYir~La~~Ll-q~GYr----VVVfD~RGhGgS----~l--tspr---ly~--a-----~~td 273 (1712)
...|.||+||+. |+..+ ...++..+. +.|.. ++.++.-|+=.. .. ..|- .|. . ..+.
T Consensus 10 ~~tPTifihG~~-gt~~s-~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~ 87 (255)
T PF06028_consen 10 STTPTIFIHGYG-GTANS-FNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAK 87 (255)
T ss_dssp S-EEEEEE--TT-GGCCC-CHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHH
T ss_pred CCCcEEEECCCC-CChhH-HHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHH
Confidence 356899999984 44433 456888886 66644 444455553111 11 1111 011 1 1245
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCC---CccEEEEecCCCChhhh
Q 000293 274 DICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERT---PLTAVTCIDNPFDLEEA 331 (1712)
Q Consensus 274 DL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s---~V~AaVlIS~P~Dl~e~ 331 (1712)
=+..+|.+++++|...++.+|||||||+.++.|+..++... .+...|.|++||+....
T Consensus 88 wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~ 148 (255)
T PF06028_consen 88 WLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILG 148 (255)
T ss_dssp HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTC
T ss_pred HHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCcccc
Confidence 67889999999999999999999999999999999977543 57999999999987643
No 120
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.17 E-value=4.7e-05 Score=90.98 Aligned_cols=106 Identities=16% Similarity=0.218 Sum_probs=74.4
Q ss_pred CCcEEEEeCCCCCCChhHHHHHH-HHHHHhCCcEEEEEcCCCCCCCCCCCC---------CCcc--cCcHHHHHHHHHHH
Q 000293 215 LDTTLLLVPGTAEGSIEKRIRLF-VCEALRRGFFPVVMNPRGCGGSPLTTS---------RLFT--AADSDDICTAIQFI 282 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYir~L-a~~Llq~GYrVVVfD~RGhGgS~ltsp---------rly~--a~~tdDL~aVLd~I 282 (1712)
.+|.+|.++|. |...-.+-+.+ +..|++.|+..+++..+=||.=..... .++. .+...+.+.+++|+
T Consensus 91 ~rp~~IhLagT-GDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl 169 (348)
T PF09752_consen 91 YRPVCIHLAGT-GDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWL 169 (348)
T ss_pred CCceEEEecCC-CccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHH
Confidence 36889999994 43222223445 788999999999999999885422111 0111 12357888899999
Q ss_pred HhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecC
Q 000293 283 GKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDN 324 (1712)
Q Consensus 283 ~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~ 324 (1712)
... +..++.+.|.||||.++...++..+. ++..+-|++.
T Consensus 170 ~~~-G~~~~g~~G~SmGG~~A~laa~~~p~--pv~~vp~ls~ 208 (348)
T PF09752_consen 170 ERE-GYGPLGLTGISMGGHMAALAASNWPR--PVALVPCLSW 208 (348)
T ss_pred Hhc-CCCceEEEEechhHhhHHhhhhcCCC--ceeEEEeecc
Confidence 887 77899999999999999887777664 5655555543
No 121
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.14 E-value=0.00012 Score=86.33 Aligned_cols=95 Identities=17% Similarity=0.174 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCc--HHHHHHHHHHHHhhC------CCCcEEEEEecHHHHHH
Q 000293 232 KRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAAD--SDDICTAIQFIGKAR------PWTTLMSVGWGYGANML 303 (1712)
Q Consensus 232 sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~--tdDL~aVLd~I~kry------P~spLvLVGhSMGG~Ia 303 (1712)
.|-..++..++++||.|++.||.|.|. .|..+. ..++...|+..++.. +..+++++|||=||.-+
T Consensus 13 ~~e~~~l~~~L~~GyaVv~pDY~Glg~-------~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa 85 (290)
T PF03583_consen 13 EYEAPFLAAWLARGYAVVAPDYEGLGT-------PYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAA 85 (290)
T ss_pred HhHHHHHHHHHHCCCEEEecCCCCCCC-------cccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHH
Confidence 355567788899999999999999987 222221 122333333333211 24689999999999776
Q ss_pred HHHHHH---cCCCCC--ccEEEEecCCCChhhhhc
Q 000293 304 TKYLAE---VGERTP--LTAVTCIDNPFDLEEATR 333 (1712)
Q Consensus 304 L~YLge---~ge~s~--V~AaVlIS~P~Dl~e~~~ 333 (1712)
+..+.. +..+-+ +.|+++.++|.|+.....
T Consensus 86 ~~AA~l~~~YApeL~~~l~Gaa~gg~~~dl~~~~~ 120 (290)
T PF03583_consen 86 LWAAELAPSYAPELNRDLVGAAAGGPPADLAALLR 120 (290)
T ss_pred HHHHHHhHHhCcccccceeEEeccCCccCHHHHHh
Confidence 554432 223345 889999999999876544
No 122
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.11 E-value=1.9e-05 Score=89.97 Aligned_cols=110 Identities=16% Similarity=0.226 Sum_probs=73.3
Q ss_pred CCcEEEEeCCCCCCChhHHHHHHHHHHH--------hCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhC
Q 000293 215 LDTTLLLVPGTAEGSIEKRIRLFVCEAL--------RRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKAR 286 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYir~La~~Ll--------q~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kry 286 (1712)
.+.+|||+||.. |+... ++.++..+. ...++++.+|+...... .. .... ....+-+.+++++|.+.|
T Consensus 3 ~g~pVlFIhG~~-Gs~~q-~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~-~~-g~~l-~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 3 SGIPVLFIHGNA-GSYKQ-VRSLASELQRKALLNDNSSHFDFFTVDFNEELSA-FH-GRTL-QRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCCEEEEECcCC-CCHhH-HHHHHHHHhhhhhhccCccceeEEEeccCccccc-cc-cccH-HHHHHHHHHHHHHHHHhh
Confidence 357999999974 45443 455665552 23588999998765321 11 1111 123455667778877766
Q ss_pred -----CCCcEEEEEecHHHHHHHHHHHHcCC-CCCccEEEEecCCCChh
Q 000293 287 -----PWTTLMSVGWGYGANMLTKYLAEVGE-RTPLTAVTCIDNPFDLE 329 (1712)
Q Consensus 287 -----P~spLvLVGhSMGG~IaL~YLge~ge-~s~V~AaVlIS~P~Dl~ 329 (1712)
+..++++|||||||.++-.++..... ...+..+++++.|....
T Consensus 78 ~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 78 KSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred hhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 67899999999999887776655432 23699999999998654
No 123
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.04 E-value=2e-05 Score=97.58 Aligned_cols=98 Identities=11% Similarity=0.106 Sum_probs=78.3
Q ss_pred hhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHH
Q 000293 230 IEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAE 309 (1712)
Q Consensus 230 ~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge 309 (1712)
...|+..++..|.+.||.+ ..|++|+|.+-..... .....+++.+.|+.+.++++..++++|||||||.++..|+..
T Consensus 106 ~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~--~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 106 EVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNR--LPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred hHHHHHHHHHHHHHcCCcc-CCCcccCCCCcccccc--HHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHH
Confidence 3567888999999999866 7899999987432211 123458899999999888888899999999999999999987
Q ss_pred cCCC--CCccEEEEecCCCChhh
Q 000293 310 VGER--TPLTAVTCIDNPFDLEE 330 (1712)
Q Consensus 310 ~ge~--s~V~AaVlIS~P~Dl~e 330 (1712)
+++. ..|+..|++++||+...
T Consensus 183 ~p~~~~k~I~~~I~la~P~~Gs~ 205 (440)
T PLN02733 183 HSDVFEKYVNSWIAIAAPFQGAP 205 (440)
T ss_pred CCHhHHhHhccEEEECCCCCCCc
Confidence 7642 35899999999997653
No 124
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.00 E-value=9.6e-06 Score=96.98 Aligned_cols=94 Identities=15% Similarity=0.213 Sum_probs=69.3
Q ss_pred CCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCC--CCCCCCC---CCCcc----cCcHHHHHHHHHHHHhh
Q 000293 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGC--GGSPLTT---SRLFT----AADSDDICTAIQFIGKA 285 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGh--GgS~lts---prly~----a~~tdDL~aVLd~I~kr 285 (1712)
.-|+|++-||. |+..+. +-.++..+++.||-|.+++++|. |+.+... ++ |. .....|+..+|+++.++
T Consensus 70 ~~PlvvlshG~-Gs~~~~-f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~-~~p~~~~erp~dis~lLd~L~~~ 146 (365)
T COG4188 70 LLPLVVLSHGS-GSYVTG-FAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGS-YAPAEWWERPLDISALLDALLQL 146 (365)
T ss_pred cCCeEEecCCC-CCCccc-hhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcc-cchhhhhcccccHHHHHHHHHHh
Confidence 46899999996 445444 44588999999999999999994 4443211 11 11 24568999999999776
Q ss_pred --CC-------CCcEEEEEecHHHHHHHHHHHHcC
Q 000293 286 --RP-------WTTLMSVGWGYGANMLTKYLAEVG 311 (1712)
Q Consensus 286 --yP-------~spLvLVGhSMGG~IaL~YLge~g 311 (1712)
-| ..++.++|||+||..++..++.+.
T Consensus 147 ~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~ 181 (365)
T COG4188 147 TASPALAGRLDPQRVGVLGHSFGGYTAMELAGAEL 181 (365)
T ss_pred hcCcccccccCccceEEEecccccHHHHHhccccc
Confidence 12 358999999999999988776654
No 125
>COG0400 Predicted esterase [General function prediction only]
Probab=97.97 E-value=0.0001 Score=83.20 Aligned_cols=103 Identities=14% Similarity=0.228 Sum_probs=60.4
Q ss_pred CCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCC--------cccC----cHHHHHHHHHH
Q 000293 214 GLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRL--------FTAA----DSDDICTAIQF 281 (1712)
Q Consensus 214 ~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprl--------y~a~----~tdDL~aVLd~ 281 (1712)
...|+||++||+ |++...++. +.....-+ +..+-.||-=.-. ...+. |... .+..+.+.+..
T Consensus 16 p~~~~iilLHG~-Ggde~~~~~-~~~~~~P~---~~~is~rG~v~~~-g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~ 89 (207)
T COG0400 16 PAAPLLILLHGL-GGDELDLVP-LPELILPN---ATLVSPRGPVAEN-GGPRFFRRYDEGSFDQEDLDLETEKLAEFLEE 89 (207)
T ss_pred CCCcEEEEEecC-CCChhhhhh-hhhhcCCC---CeEEcCCCCcccc-CcccceeecCCCccchhhHHHHHHHHHHHHHH
Confidence 456789999997 566555544 33333222 3344455532111 11111 1111 13344555665
Q ss_pred HHhhCC--CCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecC
Q 000293 282 IGKARP--WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDN 324 (1712)
Q Consensus 282 I~kryP--~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~ 324 (1712)
...+++ ..+++++|||=||++++..+..++. .+.++++.++
T Consensus 90 ~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~--~~~~ail~~g 132 (207)
T COG0400 90 LAEEYGIDSSRIILIGFSQGANIALSLGLTLPG--LFAGAILFSG 132 (207)
T ss_pred HHHHhCCChhheEEEecChHHHHHHHHHHhCch--hhccchhcCC
Confidence 566665 3799999999999999988888764 5777766543
No 126
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=97.87 E-value=0.0026 Score=74.39 Aligned_cols=221 Identities=15% Similarity=0.199 Sum_probs=123.8
Q ss_pred eEEEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHH-----HHHHHhCCcEEEEEcCCCCCCCC
Q 000293 186 YQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLF-----VCEALRRGFFPVVMNPRGCGGSP 260 (1712)
Q Consensus 186 YrRe~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~L-----a~~Llq~GYrVVVfD~RGhGgS~ 260 (1712)
.+.+.+.++-| .+.+-.+..+ .+.+|++|=.|.+ |-.+.+.+..+ +..+.++ |.++-+|.+||-.-.
T Consensus 22 ~~e~~V~T~~G-~v~V~V~Gd~-----~~~kpaiiTyhDl-glN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gA 93 (326)
T KOG2931|consen 22 CQEHDVETAHG-VVHVTVYGDP-----KGNKPAIITYHDL-GLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGA 93 (326)
T ss_pred ceeeeeccccc-cEEEEEecCC-----CCCCceEEEeccc-ccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCC
Confidence 55667777775 4444444332 1256888889997 44444422222 2344555 999999999995443
Q ss_pred CCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhcc----Cc
Q 000293 261 LTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRS----SP 336 (1712)
Q Consensus 261 ltsprly~a~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~s----l~ 336 (1712)
..-|.-|.+-..+|+.+.|-.+.+.+.-..++.+|...|++|+++||..+++ +|-|+|+|++-........+ +.
T Consensus 94 p~~p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~--rV~GLvLIn~~~~a~gwiew~~~K~~ 171 (326)
T KOG2931|consen 94 PSFPEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPE--RVLGLVLINCDPCAKGWIEWAYNKVS 171 (326)
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChh--heeEEEEEecCCCCchHHHHHHHHHH
Confidence 3444555555556666666555555566679999999999999999999886 79999999654433222111 11
Q ss_pred hhhHhHHHHHHHHHHHHHhhhhhhhccCCCCCHHHHhhhccHHHHHHHHhhhccchhcHHHHHhhcCcchhc--------
Q 000293 337 HHIALDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVV-------- 408 (1712)
Q Consensus 337 ~~~ly~~~La~~Lk~~L~~~~~lf~~~~~~~Die~IlkaktlrEFDd~~t~~~~Gf~sv~eYYr~aS~~~~L-------- 408 (1712)
.++++...++..+.+++-.|. |......-+. .-++++...+.. ..+-.+...|+..+..+..|
T Consensus 172 s~~l~~~Gmt~~~~d~ll~H~--Fg~e~~~~~~------diVq~Yr~~l~~-~~N~~Nl~~fl~ayn~R~DL~~~r~~~~ 242 (326)
T KOG2931|consen 172 SNLLYYYGMTQGVKDYLLAHH--FGKEELGNNS------DIVQEYRQHLGE-RLNPKNLALFLNAYNGRRDLSIERPKLG 242 (326)
T ss_pred HHHHHhhchhhhHHHHHHHHH--hccccccccH------HHHHHHHHHHHh-cCChhHHHHHHHHhcCCCCccccCCCcC
Confidence 112333344555556554432 3221111111 112222222222 12223444454444333222
Q ss_pred CcCCccEEEEEe-CCCCC
Q 000293 409 GNIKIPVLFIQN-DAGAV 425 (1712)
Q Consensus 409 ~kIkVPtLII~G-DDp~V 425 (1712)
...+||+|++.| .-|.+
T Consensus 243 ~tlkc~vllvvGd~Sp~~ 260 (326)
T KOG2931|consen 243 TTLKCPVLLVVGDNSPHV 260 (326)
T ss_pred ccccccEEEEecCCCchh
Confidence 256699999999 55543
No 127
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=97.86 E-value=0.00053 Score=80.42 Aligned_cols=132 Identities=14% Similarity=0.144 Sum_probs=74.1
Q ss_pred EEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHH----HHHHhCCcEEEEEcCCCCCCCCCCCC
Q 000293 189 VCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFV----CEALRRGFFPVVMNPRGCGGSPLTTS 264 (1712)
Q Consensus 189 e~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La----~~Llq~GYrVVVfD~RGhGgS~ltsp 264 (1712)
+.++++-|.....-+..+ .+.+|++|=.|-+ |-.+.+.+..|. -....+.|.++=+|.|||..-....|
T Consensus 2 h~v~t~~G~v~V~v~G~~------~~~kp~ilT~HDv-GlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p 74 (283)
T PF03096_consen 2 HDVETPYGSVHVTVQGDP------KGNKPAILTYHDV-GLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLP 74 (283)
T ss_dssp EEEEETTEEEEEEEESS--------TTS-EEEEE--T-T--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----
T ss_pred ceeccCceEEEEEEEecC------CCCCceEEEeccc-cccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCccccc
Confidence 346666664333234432 2258999999987 444444222221 22345679999999999976544455
Q ss_pred CCcccCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChh
Q 000293 265 RLFTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLE 329 (1712)
Q Consensus 265 rly~a~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~ 329 (1712)
.-|.+-..+++.+.|..+.+.+....++.+|-..||+|+++|+..+++ ++.|+|+|++.....
T Consensus 75 ~~y~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~--~V~GLiLvn~~~~~~ 137 (283)
T PF03096_consen 75 EGYQYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPE--RVLGLILVNPTCTAA 137 (283)
T ss_dssp TT-----HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGG--GEEEEEEES---S--
T ss_pred ccccccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCcc--ceeEEEEEecCCCCc
Confidence 556665666666666666555566789999999999999999999876 799999997665443
No 128
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=97.86 E-value=0.00053 Score=82.53 Aligned_cols=129 Identities=13% Similarity=0.046 Sum_probs=82.4
Q ss_pred CCCcEEEEEecCCCcccccCCCCcEEEEeCCCCC--CChh-HHHHHHHHHH-HhCCcEEEEEcCCCCCCCCCCCCCCccc
Q 000293 194 EDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAE--GSIE-KRIRLFVCEA-LRRGFFPVVMNPRGCGGSPLTTSRLFTA 269 (1712)
Q Consensus 194 ~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltG--GS~~-sYir~La~~L-lq~GYrVVVfD~RGhGgS~ltsprly~a 269 (1712)
...+.+....+.|.... .....|.||++||++. ||.. ...-.++..+ .+.+..||.+|||=.- .....
T Consensus 69 ~~~~~l~vRly~P~~~~-~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAP-------Eh~~P 140 (336)
T KOG1515|consen 69 DPFTNLPVRLYRPTSSS-SETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAP-------EHPFP 140 (336)
T ss_pred cCCCCeEEEEEcCCCCC-cccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCC-------CCCCC
Confidence 34444444555543221 2146799999999632 2211 1223344443 6679999999999332 21122
Q ss_pred CcHHHHHHHHHHHHhh------CCCCcEEEEEecHHHHHHHHHHHHcC----CCCCccEEEEecCCCChhh
Q 000293 270 ADSDDICTAIQFIGKA------RPWTTLMSVGWGYGANMLTKYLAEVG----ERTPLTAVTCIDNPFDLEE 330 (1712)
Q Consensus 270 ~~tdDL~aVLd~I~kr------yP~spLvLVGhSMGG~IaL~YLge~g----e~s~V~AaVlIS~P~Dl~e 330 (1712)
+..+|...++.|+.+. ....+++++|-|-||||+...+.+.. ....++|.+++-|.+...+
T Consensus 141 a~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 141 AAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTD 211 (336)
T ss_pred ccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCC
Confidence 3357888888887664 23468999999999999988776543 2357999999988776654
No 129
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=97.80 E-value=0.00019 Score=81.66 Aligned_cols=108 Identities=14% Similarity=0.116 Sum_probs=71.7
Q ss_pred CCcEEEEeCCCCCCChhHHHH--HHHHHHHhCCcEEEEEcCCCCCCCCC-----CCCCCcccCcHHHHHHHHHHHHhhCC
Q 000293 215 LDTTLLLVPGTAEGSIEKRIR--LFVCEALRRGFFPVVMNPRGCGGSPL-----TTSRLFTAADSDDICTAIQFIGKARP 287 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYir--~La~~Llq~GYrVVVfD~RGhGgS~l-----tsprly~a~~tdDL~aVLd~I~kryP 287 (1712)
..|+||++||. +++...+.. .+...+-+.||-|+.++......... ........++...+..+|+++..+|+
T Consensus 15 ~~PLVv~LHG~-~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~ 93 (220)
T PF10503_consen 15 PVPLVVVLHGC-GQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYN 93 (220)
T ss_pred CCCEEEEeCCC-CCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcc
Confidence 46899999995 555555432 23344556899999888532111100 00011112345678889999998886
Q ss_pred --CCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCC
Q 000293 288 --WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNP 325 (1712)
Q Consensus 288 --~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P 325 (1712)
..++++.|+|.||+++..++..+++ .+.++..++..
T Consensus 94 iD~~RVyv~G~S~Gg~ma~~la~~~pd--~faa~a~~sG~ 131 (220)
T PF10503_consen 94 IDPSRVYVTGLSNGGMMANVLACAYPD--LFAAVAVVSGV 131 (220)
T ss_pred cCCCceeeEEECHHHHHHHHHHHhCCc--cceEEEeeccc
Confidence 4599999999999999999999887 56666555443
No 130
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.78 E-value=0.00014 Score=84.34 Aligned_cols=106 Identities=14% Similarity=0.194 Sum_probs=79.1
Q ss_pred cCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhC-----
Q 000293 212 EHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKAR----- 286 (1712)
Q Consensus 212 ~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kry----- 286 (1712)
..+..|+|||+||+. ....++..++.++++.||-||.+|....+.. ......+++.++++|+.+..
T Consensus 13 ~~g~yPVv~f~~G~~--~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~-------~~~~~~~~~~~vi~Wl~~~L~~~l~ 83 (259)
T PF12740_consen 13 SAGTYPVVLFLHGFL--LINSWYSQLLEHVASHGYIVVAPDLYSIGGP-------DDTDEVASAAEVIDWLAKGLESKLP 83 (259)
T ss_pred CCCCcCEEEEeCCcC--CCHHHHHHHHHHHHhCceEEEEecccccCCC-------CcchhHHHHHHHHHHHHhcchhhcc
Confidence 346689999999984 4444567789999999999999997765431 12235678889999876532
Q ss_pred -----CCCcEEEEEecHHHHHHHHHHHHcCC---CCCccEEEEecCCC
Q 000293 287 -----PWTTLMSVGWGYGANMLTKYLAEVGE---RTPLTAVTCIDNPF 326 (1712)
Q Consensus 287 -----P~spLvLVGhSMGG~IaL~YLge~ge---~s~V~AaVlIS~P~ 326 (1712)
...++.+.|||-||-++...+....+ ..++++++++.+.-
T Consensus 84 ~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 84 LGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred ccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 23489999999999999888877532 24688999987654
No 131
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.71 E-value=2.1e-05 Score=89.40 Aligned_cols=91 Identities=15% Similarity=0.194 Sum_probs=55.3
Q ss_pred cEEEEeCCCCCCChhHHHHHHHHHHHhCCcE---EEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEE
Q 000293 217 TTLLLVPGTAEGSIEKRIRLFVCEALRRGFF---PVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMS 293 (1712)
Q Consensus 217 PtVVLLHGltGGS~~sYir~La~~Llq~GYr---VVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spLvL 293 (1712)
.||||+||.. ++...-|..+++.|.++||. +++++|-.....+..............++++|+.++...+. ++-+
T Consensus 2 ~PVVlVHG~~-~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDI 79 (219)
T PF01674_consen 2 RPVVLVHGTG-GNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDI 79 (219)
T ss_dssp --EEEE--TT-TTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEE
T ss_pred CCEEEECCCC-cchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEE
Confidence 4799999974 33434456688999999999 79999954443221100001123357899999999887777 9999
Q ss_pred EEecHHHHHHHHHHHH
Q 000293 294 VGWGYGANMLTKYLAE 309 (1712)
Q Consensus 294 VGhSMGG~IaL~YLge 309 (1712)
|||||||.++-+|+.-
T Consensus 80 VgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 80 VGHSMGGTIARYYIKG 95 (219)
T ss_dssp EEETCHHHHHHHHHHH
T ss_pred EEcCCcCHHHHHHHHH
Confidence 9999999988777743
No 132
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=97.63 E-value=0.00012 Score=82.51 Aligned_cols=54 Identities=15% Similarity=0.123 Sum_probs=40.6
Q ss_pred HHHHHHHHHHhhCC--CCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhh
Q 000293 274 DICTAIQFIGKARP--WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEE 330 (1712)
Q Consensus 274 DL~aVLd~I~kryP--~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e 330 (1712)
=+..+++|++++-. ..+|.++|.|.||-+++..++.++ .|+++|+++++.-...
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~---~i~avVa~~ps~~~~~ 60 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP---QISAVVAISPSSVVFQ 60 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS---SEEEEEEES--SB--S
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC---CccEEEEeCCceeEec
Confidence 36789999987622 258999999999999999999986 5999999877655543
No 133
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.59 E-value=0.00041 Score=79.59 Aligned_cols=113 Identities=15% Similarity=0.127 Sum_probs=74.3
Q ss_pred CCcEEEEeCCCCCCChhHHHHHHHHHHHhCCc--EEEEEcCCCCCCCCCCC-CCCcccCcHHHHHHHHHHHHhhCCCCcE
Q 000293 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGF--FPVVMNPRGCGGSPLTT-SRLFTAADSDDICTAIQFIGKARPWTTL 291 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYir~La~~Llq~GY--rVVVfD~RGhGgS~lts-prly~a~~tdDL~aVLd~I~kryP~spL 291 (1712)
.+..+|++||+. .+.+.-++.+++.....|| .+++|.||+.|.-.... .+........++..+|..+....+..+|
T Consensus 17 ~~~vlvfVHGyn-~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 17 DKEVLVFVHGYN-NSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCeEEEEEeCCC-CCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 467999999984 3444445556655555555 69999999887521100 0000011246788888888877677899
Q ss_pred EEEEecHHHHHHHHHHHHcCCC-------CCccEEEEecCCCCh
Q 000293 292 MSVGWGYGANMLTKYLAEVGER-------TPLTAVTCIDNPFDL 328 (1712)
Q Consensus 292 vLVGhSMGG~IaL~YLge~ge~-------s~V~AaVlIS~P~Dl 328 (1712)
++++||||+.+++..+...... ..+..+++++|-.+.
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 9999999999998887663221 246666666555544
No 134
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=97.58 E-value=0.0011 Score=72.73 Aligned_cols=92 Identities=13% Similarity=0.141 Sum_probs=55.6
Q ss_pred cEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEEEEe
Q 000293 217 TTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGW 296 (1712)
Q Consensus 217 PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spLvLVGh 296 (1712)
+.+|++||+.+++...|..++-..+.. +-.+++ ..+..-..+|..+.++.-.... ..+.++|+|
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~----a~rveq-----------~~w~~P~~~dWi~~l~~~v~a~-~~~~vlVAH 66 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN----ARRVEQ-----------DDWEAPVLDDWIARLEKEVNAA-EGPVVLVAH 66 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc----chhccc-----------CCCCCCCHHHHHHHHHHHHhcc-CCCeEEEEe
Confidence 569999998654444443333222211 111111 1112223455555554322222 357999999
Q ss_pred cHHHHHHHHHHHHcCCCCCccEEEEecCCC
Q 000293 297 GYGANMLTKYLAEVGERTPLTAVTCIDNPF 326 (1712)
Q Consensus 297 SMGG~IaL~YLge~ge~s~V~AaVlIS~P~ 326 (1712)
|+|..++++|+.+... +|.|+++|++|.
T Consensus 67 SLGc~~v~h~~~~~~~--~V~GalLVAppd 94 (181)
T COG3545 67 SLGCATVAHWAEHIQR--QVAGALLVAPPD 94 (181)
T ss_pred cccHHHHHHHHHhhhh--ccceEEEecCCC
Confidence 9999999999988754 799999998774
No 135
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.57 E-value=0.00024 Score=81.58 Aligned_cols=108 Identities=14% Similarity=0.118 Sum_probs=80.7
Q ss_pred cCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhC----C
Q 000293 212 EHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKAR----P 287 (1712)
Q Consensus 212 ~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kry----P 287 (1712)
+.+..|+|+|+||+. -..+|+..+..+++++||-||++++-.... .......++...+++|+.+.. |
T Consensus 42 ~~G~yPVilF~HG~~--l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~-------p~~~~Ei~~aa~V~~WL~~gL~~~Lp 112 (307)
T PF07224_consen 42 EAGTYPVILFLHGFN--LYNSFYSQLLAHIASHGFIVVAPQLYTLFP-------PDGQDEIKSAASVINWLPEGLQHVLP 112 (307)
T ss_pred cCCCccEEEEeechh--hhhHHHHHHHHHHhhcCeEEEechhhcccC-------CCchHHHHHHHHHHHHHHhhhhhhCC
Confidence 456789999999983 345566778889999999999999865321 122345678889999987653 1
Q ss_pred ------CCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCCh
Q 000293 288 ------WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDL 328 (1712)
Q Consensus 288 ------~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl 328 (1712)
-.++.++|||.||-.+...+..+.....+.+++.+.+.-..
T Consensus 113 ~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 113 ENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred CCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 25899999999999998888776545568888877655433
No 136
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.54 E-value=7.6e-05 Score=89.67 Aligned_cols=106 Identities=13% Similarity=0.194 Sum_probs=64.8
Q ss_pred CCCcEEEEeCCCCCCC-hhHHHHHHHHHHHhC---CcEEEEEcCCCCCCCCCCCCCCccc--CcH----HHHHHHHHHHH
Q 000293 214 GLDTTLLLVPGTAEGS-IEKRIRLFVCEALRR---GFFPVVMNPRGCGGSPLTTSRLFTA--ADS----DDICTAIQFIG 283 (1712)
Q Consensus 214 ~~~PtVVLLHGltGGS-~~sYir~La~~Llq~---GYrVVVfD~RGhGgS~ltsprly~a--~~t----dDL~aVLd~I~ 283 (1712)
..+|++|++|||.+.. ...++..+...+.++ ++.|+++||...... .|.. ..+ ..+..+|..|.
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~------~Y~~a~~n~~~vg~~la~~l~~L~ 142 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN------NYPQAVANTRLVGRQLAKFLSFLI 142 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc------cccchhhhHHHHHHHHHHHHHHHH
Confidence 4689999999998766 456788888876664 899999999754321 2322 122 34445566665
Q ss_pred hh--CCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCC
Q 000293 284 KA--RPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNP 325 (1712)
Q Consensus 284 kr--yP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P 325 (1712)
.. .+...+++|||||||.++...........+|..+..+.|.
T Consensus 143 ~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPA 186 (331)
T PF00151_consen 143 NNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPA 186 (331)
T ss_dssp HHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B
T ss_pred hhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcc
Confidence 32 4567999999999999987555444332357777777654
No 137
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=97.51 E-value=0.00022 Score=87.17 Aligned_cols=107 Identities=14% Similarity=0.189 Sum_probs=62.2
Q ss_pred CCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCC--C-CCC---------------------CC---
Q 000293 214 GLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSP--L-TTS---------------------RL--- 266 (1712)
Q Consensus 214 ~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~--l-tsp---------------------rl--- 266 (1712)
+.-|+|||.||+ +|+...| -.++..|+++||-|++++||.....- . ..+ ..
T Consensus 98 ~~~PvvIFSHGl-gg~R~~y-S~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T PF03403_consen 98 GKFPVVIFSHGL-GGSRTSY-SAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPE 175 (379)
T ss_dssp S-EEEEEEE--T-T--TTTT-HHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GG
T ss_pred CCCCEEEEeCCC-CcchhhH-HHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccch
Confidence 346899999998 5566665 45889999999999999999653220 0 000 00
Q ss_pred --ccc------CcHHHHHHHHHHHHhhC----------------------CCCcEEEEEecHHHHHHHHHHHHcCCCCCc
Q 000293 267 --FTA------ADSDDICTAIQFIGKAR----------------------PWTTLMSVGWGYGANMLTKYLAEVGERTPL 316 (1712)
Q Consensus 267 --y~a------~~tdDL~aVLd~I~kry----------------------P~spLvLVGhSMGG~IaL~YLge~ge~s~V 316 (1712)
+.. ...+|+..+++.|.+-. ...++.++|||+||..++..+... .++
T Consensus 176 ~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d---~r~ 252 (379)
T PF03403_consen 176 EEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD---TRF 252 (379)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH----TT-
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc---cCc
Confidence 000 12467888888775310 124789999999999999888775 368
Q ss_pred cEEEEecCC
Q 000293 317 TAVTCIDNP 325 (1712)
Q Consensus 317 ~AaVlIS~P 325 (1712)
+++|++.+.
T Consensus 253 ~~~I~LD~W 261 (379)
T PF03403_consen 253 KAGILLDPW 261 (379)
T ss_dssp -EEEEES--
T ss_pred ceEEEeCCc
Confidence 888877543
No 138
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=97.50 E-value=0.00053 Score=77.19 Aligned_cols=107 Identities=14% Similarity=0.165 Sum_probs=46.9
Q ss_pred CcEEEEeCCCCCCChhHH---HHHHHHHHHhCCcEEEEEcCCCCC-----CCCC---------CCCCCcc---cC----c
Q 000293 216 DTTLLLVPGTAEGSIEKR---IRLFVCEALRRGFFPVVMNPRGCG-----GSPL---------TTSRLFT---AA----D 271 (1712)
Q Consensus 216 ~PtVVLLHGltGGS~~sY---ir~La~~Llq~GYrVVVfD~RGhG-----gS~l---------tsprly~---a~----~ 271 (1712)
++-||+|||+ +.+.+-+ ...+...|.+.+|..+.+|-+=-- -... .....|. .. .
T Consensus 4 k~riLcLHG~-~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 4 KPRILCLHGY-GQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp --EEEEE--T-T--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CceEEEeCCC-CcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 5789999997 3344333 233444444448999999876322 1100 0011111 11 1
Q ss_pred HHHHHHHHHH----HHhhCCCCcEEEEEecHHHHHHHHHHHHcC------CCCCccEEEEecCC
Q 000293 272 SDDICTAIQF----IGKARPWTTLMSVGWGYGANMLTKYLAEVG------ERTPLTAVTCIDNP 325 (1712)
Q Consensus 272 tdDL~aVLd~----I~kryP~spLvLVGhSMGG~IaL~YLge~g------e~s~V~AaVlIS~P 325 (1712)
..++...+++ +.+.-| =..++|||.||.+++.++.... ...+++-+|++|+.
T Consensus 83 ~~~~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~ 144 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGF 144 (212)
T ss_dssp G---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES--
T ss_pred ccCHHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEccc
Confidence 2344444444 444333 1379999999999998886532 12357777777554
No 139
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=97.49 E-value=0.00032 Score=82.45 Aligned_cols=131 Identities=17% Similarity=0.177 Sum_probs=84.0
Q ss_pred cceEEEEEEcCCCcEEEEEecCCCcccccCCC-CcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC
Q 000293 184 LEYQRVCVNTEDGGVISLDWPSNLDLHEEHGL-DTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLT 262 (1712)
Q Consensus 184 v~YrRe~Ltt~DGg~LaLDW~~~~~~~~~~~~-~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~lt 262 (1712)
-.-+|--+...||..+-.-+.+..+. ..+. ...||++-|-+| .|--..+..-++.||.|+.+|++|+++|...
T Consensus 212 ~NG~R~kiks~dgneiDtmF~d~r~n--~~~ngq~LvIC~EGNAG----FYEvG~m~tP~~lgYsvLGwNhPGFagSTG~ 285 (517)
T KOG1553|consen 212 KNGQRLKIKSSDGNEIDTMFLDGRPN--QSGNGQDLVICFEGNAG----FYEVGVMNTPAQLGYSVLGWNHPGFAGSTGL 285 (517)
T ss_pred CCCeEEEEeecCCcchhheeecCCCC--CCCCCceEEEEecCCcc----ceEeeeecChHHhCceeeccCCCCccccCCC
Confidence 34467778888998775444433211 1222 345666666432 2322233445688999999999999999643
Q ss_pred CCCCcccCcHHHHHHHHHHHHh--hCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCC
Q 000293 263 TSRLFTAADSDDICTAIQFIGK--ARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFD 327 (1712)
Q Consensus 263 sprly~a~~tdDL~aVLd~I~k--ryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~D 327 (1712)
. |......-+.+++++.-+ .|+...|++.|||.||.-+++.+..+++ |+|+|+- +.||
T Consensus 286 P---~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd---VkavvLD-AtFD 345 (517)
T KOG1553|consen 286 P---YPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD---VKAVVLD-ATFD 345 (517)
T ss_pred C---CcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC---ceEEEee-cchh
Confidence 2 222333445566666543 3667789999999999999988888875 7766654 4443
No 140
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.48 E-value=0.00036 Score=86.71 Aligned_cols=191 Identities=16% Similarity=0.185 Sum_probs=112.0
Q ss_pred CcEEEEeCCCC-CCChhHHHHHHHHHHHhCC--cEEEEEcCCC-CCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcE
Q 000293 216 DTTLLLVPGTA-EGSIEKRIRLFVCEALRRG--FFPVVMNPRG-CGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTL 291 (1712)
Q Consensus 216 ~PtVVLLHGlt-GGS~~sYir~La~~Llq~G--YrVVVfD~RG-hGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spL 291 (1712)
.|.++++||.+ -.....+++.+-..+...| -.+..||++- +|+-...-..- ....=.+..+..+...||..+|
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG~nI~h~ae---~~vSf~r~kvlei~gefpha~I 252 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGGANIKHAAE---YSVSFDRYKVLEITGEFPHAPI 252 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCCcchHHHHH---HHHHHhhhhhhhhhccCCCCce
Confidence 57899999975 2222333333444444444 4467788773 44321100000 0011122233344556899999
Q ss_pred EEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhHhHHHHHHHHHHHHHhhhhhhhccCCCCCHHH
Q 000293 292 MSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIALDEKLANGLIDILRSNKELFKGRAKGFDVEK 371 (1712)
Q Consensus 292 vLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~ly~~~La~~Lk~~L~~~~~lf~~~~~~~Die~ 371 (1712)
+++|+|||+.+++.......+ .-|+++|||+-|++.....+.
T Consensus 253 iLvGrsmGAlVachVSpsnsd-v~V~~vVCigypl~~vdgprg------------------------------------- 294 (784)
T KOG3253|consen 253 ILVGRSMGALVACHVSPSNSD-VEVDAVVCIGYPLDTVDGPRG------------------------------------- 294 (784)
T ss_pred EEEecccCceeeEEeccccCC-ceEEEEEEecccccCCCcccC-------------------------------------
Confidence 999999998887766654433 248999999777655433210
Q ss_pred HhhhccHHHHHHHHhhhccchhcHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCC
Q 000293 372 ALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLP 450 (1712)
Q Consensus 372 IlkaktlrEFDd~~t~~~~Gf~sv~eYYr~aS~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~nPnv~LvLt~gGH 450 (1712)
++ | +.+-.++.|+|+|.| .|..+++..+.....+--...+++++.+++
T Consensus 295 ------ir--D-----------------------E~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~ad 343 (784)
T KOG3253|consen 295 ------IR--D-----------------------EALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGAD 343 (784)
T ss_pred ------Cc--c-----------------------hhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCC
Confidence 00 1 123356899999999 999998876543222223456799999999
Q ss_pred ccccCCCC------chhHHHHHHHHHHHHHHHhh
Q 000293 451 SSVIGGGR------AAESWCQNLVIEWLSAVELG 478 (1712)
Q Consensus 451 H~gF~e~~------~~~sWv~r~VlEFL~av~~~ 478 (1712)
|.+-.... .....++..+.+|+..+-..
T Consensus 344 hsmaipk~k~esegltqseVd~~i~~aI~efvt~ 377 (784)
T KOG3253|consen 344 HSMAIPKRKVESEGLTQSEVDSAIAQAIKEFVTI 377 (784)
T ss_pred ccccCCccccccccccHHHHHHHHHHHHHHHHHH
Confidence 97765431 11234667777777766443
No 141
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.42 E-value=0.0011 Score=79.11 Aligned_cols=117 Identities=18% Similarity=0.161 Sum_probs=77.5
Q ss_pred ceEEEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhH-HH-----HHHHHHHHhCCcEEEEEcCCCCCC
Q 000293 185 EYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEK-RI-----RLFVCEALRRGFFPVVMNPRGCGG 258 (1712)
Q Consensus 185 ~YrRe~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~s-Yi-----r~La~~Llq~GYrVVVfD~RGhGg 258 (1712)
.+.|..++. |+..+----...+ ....+..||++-|- ++..+. ++ ..+...+-+.|-.|++||+||.|.
T Consensus 111 ~~kRv~Iq~-D~~~IDt~~I~~~----~a~~~RWiL~s~GN-g~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~ 184 (365)
T PF05677_consen 111 SVKRVPIQY-DGVKIDTMAIHQP----EAKPQRWILVSNGN-GECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGS 184 (365)
T ss_pred ceeeEEEee-CCEEEEEEEeeCC----CCCCCcEEEEEcCC-hHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCcccc
Confidence 446777776 6654432111111 12345789999885 334443 12 234455667899999999999999
Q ss_pred CCCCCCCCcccCcHHHHHHHHHHHHhhC---CCCcEEEEEecHHHHHHHHHHHHc
Q 000293 259 SPLTTSRLFTAADSDDICTAIQFIGKAR---PWTTLMSVGWGYGANMLTKYLAEV 310 (1712)
Q Consensus 259 S~ltsprly~a~~tdDL~aVLd~I~kry---P~spLvLVGhSMGG~IaL~YLge~ 310 (1712)
|..... ......|..++++|++.+. ....+++-|||+||.++...+..+
T Consensus 185 S~G~~s---~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 185 STGPPS---RKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred CCCCCC---HHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 964432 2455789999999998633 235899999999999988766554
No 142
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=97.41 E-value=0.0014 Score=83.16 Aligned_cols=228 Identities=14% Similarity=0.127 Sum_probs=134.7
Q ss_pred EEEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC---C
Q 000293 187 QRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLT---T 263 (1712)
Q Consensus 187 rRe~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~lt---s 263 (1712)
+|...+..||..+.+-.....+ ..-.+..|.+|.--|-.|-++..++....--|+.+||--....-||=|.-... .
T Consensus 420 ~riwa~a~dgv~VPVSLvyrkd-~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~ 498 (682)
T COG1770 420 RRIWATADDGVQVPVSLVYRKD-TKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYED 498 (682)
T ss_pred EEEEEEcCCCcEeeEEEEEecc-cCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHh
Confidence 4455666888766554322211 12345678899999977767766655555568899999999999998765311 1
Q ss_pred CCCcc-cCcHHHHHHHHHHHHhh-CC-CCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhhhccCchhhH
Q 000293 264 SRLFT-AADSDDICTAIQFIGKA-RP-WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEATRSSPHHIA 340 (1712)
Q Consensus 264 prly~-a~~tdDL~aVLd~I~kr-yP-~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~~sl~~~~l 340 (1712)
.+..+ .....|+.++.+||.+. +. ..+++++|-|.||+++...+.+.|+ .+.++++-.|-.|...++...
T Consensus 499 GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~--lf~~iiA~VPFVDvltTMlD~----- 571 (682)
T COG1770 499 GKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPD--LFAGIIAQVPFVDVLTTMLDP----- 571 (682)
T ss_pred hhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChh--hhhheeecCCccchhhhhcCC-----
Confidence 11111 12358999999998754 33 3489999999999999998888775 566666655544655443110
Q ss_pred hHHHHHHHHHHHHHhhhhhhhccCCCCCHHHHhhhccHHHHHHHHhhhccchhcHHHHHhhcCcchhcCcCC-ccEEEEE
Q 000293 341 LDEKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIK-IPVLFIQ 419 (1712)
Q Consensus 341 y~~~La~~Lk~~L~~~~~lf~~~~~~~Die~IlkaktlrEFDd~~t~~~~Gf~sv~eYYr~aS~~~~L~kIk-VPtLII~ 419 (1712)
.. .-+..|+++.=. |. -+..-+|...+|+.+.+..-. -|+|++.
T Consensus 572 ---------------sl-----------------PLT~~E~~EWGN-P~--d~e~y~yikSYSPYdNV~a~~YP~ilv~~ 616 (682)
T COG1770 572 ---------------SL-----------------PLTVTEWDEWGN-PL--DPEYYDYIKSYSPYDNVEAQPYPAILVTT 616 (682)
T ss_pred ---------------CC-----------------CCCccchhhhCC-cC--CHHHHHHHhhcCchhccccCCCCceEEEc
Confidence 00 012233333100 00 012234455566666555433 4667777
Q ss_pred e-CCCCCCCCC-hHH----HHHhcCCCeEEEEec-CCCccccCCC
Q 000293 420 N-DAGAVPPFS-IPR----SSIAENPFTSLLLCS-CLPSSVIGGG 457 (1712)
Q Consensus 420 G-DDp~VP~~a-ip~----~la~~nPnv~LvLt~-gGHH~gF~e~ 457 (1712)
| .|+-|..-. +.. ...+.-.+-.|..+. .+||++..++
T Consensus 617 Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHgG~SgR 661 (682)
T COG1770 617 GLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGGASGR 661 (682)
T ss_pred cccCCccccchHHHHHHHHhhcccCCCcEEEEecccccCCCCCCc
Confidence 7 999887422 111 111222333444454 7999999874
No 143
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=97.38 E-value=0.00031 Score=78.12 Aligned_cols=123 Identities=19% Similarity=0.228 Sum_probs=83.3
Q ss_pred CCcEEEEE-ecCCCcccccCCCCcEEEEeCCCCCCChhH-HHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcH
Q 000293 195 DGGVISLD-WPSNLDLHEEHGLDTTLLLVPGTAEGSIEK-RIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADS 272 (1712)
Q Consensus 195 DGg~LaLD-W~~~~~~~~~~~~~PtVVLLHGltGGS~~s-Yir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~t 272 (1712)
-|+.-.+| |+.. ...+..||+||..+.-... -....+..+.++||+|+.+++- .++. .+ .-....
T Consensus 52 ~~g~q~VDIwg~~-------~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~---l~~q--~h-tL~qt~ 118 (270)
T KOG4627|consen 52 EGGRQLVDIWGST-------NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYN---LCPQ--VH-TLEQTM 118 (270)
T ss_pred CCCceEEEEecCC-------CCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccC---cCcc--cc-cHHHHH
Confidence 34344456 7642 2468999999964422211 2334567789999999998763 3221 11 112235
Q ss_pred HHHHHHHHHHHhhCCCCc-EEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhh
Q 000293 273 DDICTAIQFIGKARPWTT-LMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEA 331 (1712)
Q Consensus 273 dDL~aVLd~I~kryP~sp-LvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~ 331 (1712)
.|+.+.++++.+.++..+ +.+-|||.|+.++++.+.+... .+|.|+++.|..|++.+-
T Consensus 119 ~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~-prI~gl~l~~GvY~l~EL 177 (270)
T KOG4627|consen 119 TQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRS-PRIWGLILLCGVYDLREL 177 (270)
T ss_pred HHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcC-chHHHHHHHhhHhhHHHH
Confidence 788899999999998764 5677999999999999988543 468888888877776543
No 144
>COG4449 Predicted protease of the Abi (CAAX) family [General function prediction only]
Probab=97.32 E-value=0.00014 Score=87.48 Aligned_cols=79 Identities=20% Similarity=0.059 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHhhHHHHHhhcCCchhhHHHHH--HHhhhcC----Cc----------chH-HHHHHHHHHHHHHHHhc
Q 000293 1573 TVVVLVEELLFRSWLPEEIAADLDYHRGIIISGL--AFALSQR----SP----------QAI-PGLWLLSLALAGVRQRS 1635 (1712)
Q Consensus 1573 llvgi~EELLFRG~L~~~L~~~~g~~~AiIISSL--LFALlHl----tl----------~~~-i~lfLlGLvLa~ay~rt 1635 (1712)
++-+++|||+||-.|+..=.+.-.+|..+.+.-. +|-|+|- ++ +-| ....++|+..+..|..
T Consensus 717 l~PAl~EElvFRvvLlP~P~E~r~~W~tl~a~~~l~LfvLyHplnA~T~y~rg~PvFf~PiFL~ltglLGL~Ctvty~v- 795 (827)
T COG4449 717 LIPALGEELVFRVVLLPGPGEGRRPWVTLGAATGLVLFVLYHPLNALTFYPRGAPVFFRPIFLLLTGLLGLGCTVTYRV- 795 (827)
T ss_pred ehhhccccceeEEEecCCCCccccchHhHHHHHHHHHHHHhhhhhhhhccccCCcceeccHHHHHHHHHhhhhhhhHHh-
Confidence 3458999999999998765555456665555444 8999997 11 122 2234678888888888
Q ss_pred CCcchHHHHHHhHHhhh
Q 000293 1636 QGSLSVPIGLRTGIMAS 1652 (1712)
Q Consensus 1636 tGSLWlpIGLHagWn~~ 1652 (1712)
|||||..+.+|++.+..
T Consensus 796 T~SlW~iV~lHW~vVvV 812 (827)
T COG4449 796 TGSLWPIVLLHWAVVVV 812 (827)
T ss_pred ccchHHHHHHHHHHHHH
Confidence 89999999999876543
No 145
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.30 E-value=0.0018 Score=75.93 Aligned_cols=126 Identities=15% Similarity=0.139 Sum_probs=84.6
Q ss_pred CCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHH--HHHHHHHhCCcEEEEEc-------CCCCCCCCCCCCC
Q 000293 195 DGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIR--LFVCEALRRGFFPVVMN-------PRGCGGSPLTTSR 265 (1712)
Q Consensus 195 DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir--~La~~Llq~GYrVVVfD-------~RGhGgS~ltspr 265 (1712)
+|....+..+.|+. .....|.||++||- +++...+.. .+=..+.+.||-|+.+| --||+.+..+..+
T Consensus 43 ~g~~r~y~l~vP~g---~~~~apLvv~LHG~-~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~ 118 (312)
T COG3509 43 NGLKRSYRLYVPPG---LPSGAPLVVVLHGS-GGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADR 118 (312)
T ss_pred CCCccceEEEcCCC---CCCCCCEEEEEecC-CCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccc
Confidence 44444555555532 22345899999994 555554421 11223456799999883 3345555434443
Q ss_pred CcccCcHHHHHHHHHHHHhhCCCC--cEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCC
Q 000293 266 LFTAADSDDICTAIQFIGKARPWT--TLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPF 326 (1712)
Q Consensus 266 ly~a~~tdDL~aVLd~I~kryP~s--pLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~ 326 (1712)
.-...++.+++++++.+..+|... ++++.|.|-||.++.++++++++ .+.++..|+...
T Consensus 119 ~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~--~faa~A~VAg~~ 179 (312)
T COG3509 119 RRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPD--IFAAIAPVAGLL 179 (312)
T ss_pred cCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcc--cccceeeeeccc
Confidence 445567888999999999988644 99999999999999999999876 566666666554
No 146
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=97.20 E-value=0.0022 Score=80.94 Aligned_cols=139 Identities=19% Similarity=0.202 Sum_probs=91.4
Q ss_pred EEEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCC---C
Q 000293 187 QRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLT---T 263 (1712)
Q Consensus 187 rRe~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~lt---s 263 (1712)
+|..+...||..+.+-..... .....+.+|.+|..+|..|-+...+++.--.-|..+|+-.+..|-||=|.-... .
T Consensus 442 ~r~~~~SkDGt~VPM~Iv~kk-~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~ 520 (712)
T KOG2237|consen 442 ERIEVSSKDGTKVPMFIVYKK-DIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKD 520 (712)
T ss_pred EEEEEecCCCCccceEEEEec-hhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhc
Confidence 455677789987776543321 122345689999999976656666655433346679999999999998866422 2
Q ss_pred CCCcc-cCcHHHHHHHHHHHHhh-C-CCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCC-Chh
Q 000293 264 SRLFT-AADSDDICTAIQFIGKA-R-PWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPF-DLE 329 (1712)
Q Consensus 264 prly~-a~~tdDL~aVLd~I~kr-y-P~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~-Dl~ 329 (1712)
+++-. ....+|+.+..+|+... | ...++.+.|.|-||.++...+-.+|+ .+. +|+.-.|+ |+.
T Consensus 521 G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPd--LF~-avia~VpfmDvL 587 (712)
T KOG2237|consen 521 GRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPD--LFG-AVIAKVPFMDVL 587 (712)
T ss_pred cchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCch--Hhh-hhhhcCcceehh
Confidence 22211 12468999999998764 3 23589999999999988877777665 344 44443343 443
No 147
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.11 E-value=0.0019 Score=73.29 Aligned_cols=113 Identities=13% Similarity=0.053 Sum_probs=68.6
Q ss_pred CCCcEEEEeCCCCCCChhH-HHHHHHHHHHhCC----cEEEEEcCCCCCCCC--CCC-----CCCcccC---cH-HHH-H
Q 000293 214 GLDTTLLLVPGTAEGSIEK-RIRLFVCEALRRG----FFPVVMNPRGCGGSP--LTT-----SRLFTAA---DS-DDI-C 276 (1712)
Q Consensus 214 ~~~PtVVLLHGltGGS~~s-Yir~La~~Llq~G----YrVVVfD~RGhGgS~--lts-----prly~a~---~t-dDL-~ 276 (1712)
..-|+|+++||. ++.... .+...+..+.+.| .-+|+++.-+.+.-. -.. ....... .. +-+ .
T Consensus 22 ~~~PvlylldG~-~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 100 (251)
T PF00756_consen 22 KPYPVLYLLDGQ-SGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTE 100 (251)
T ss_dssp TTEEEEEEESHT-THHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHT
T ss_pred CCCEEEEEccCC-ccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhc
Confidence 346899999995 211111 1333344444443 456777776655110 000 0001111 11 222 3
Q ss_pred HHHHHHHhhCCCC--cEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChh
Q 000293 277 TAIQFIGKARPWT--TLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLE 329 (1712)
Q Consensus 277 aVLd~I~kryP~s--pLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~ 329 (1712)
+++.+|.++|+.. +.+++|+||||..++.++.++++ .+.+++++|+.++..
T Consensus 101 el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd--~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 101 ELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPD--LFGAVIAFSGALDPS 153 (251)
T ss_dssp HHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTT--TESEEEEESEESETT
T ss_pred cchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCcc--ccccccccCcccccc
Confidence 6788888888633 27999999999999999999886 689999999776553
No 148
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.11 E-value=0.0044 Score=69.92 Aligned_cols=107 Identities=18% Similarity=0.174 Sum_probs=81.0
Q ss_pred CcEEEEeCCCCCCC-hhHHHHHHHHHHHhCCcEEEEEcCCC----CCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCc
Q 000293 216 DTTLLLVPGTAEGS-IEKRIRLFVCEALRRGFFPVVMNPRG----CGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTT 290 (1712)
Q Consensus 216 ~PtVVLLHGltGGS-~~sYir~La~~Llq~GYrVVVfD~RG----hGgS~ltsprly~a~~tdDL~aVLd~I~kryP~sp 290 (1712)
...|||+-|++.|- ...|...++.++-+.+|..|-+-.|. +|-+.+ -.+.+|+..+++||...--...
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~sl-------k~D~edl~~l~~Hi~~~~fSt~ 108 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSL-------KDDVEDLKCLLEHIQLCGFSTD 108 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccccc-------cccHHHHHHHHHHhhccCcccc
Confidence 35789999885543 34588999999999999999887763 443332 2467999999999987655568
Q ss_pred EEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChh
Q 000293 291 LMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLE 329 (1712)
Q Consensus 291 LvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~ 329 (1712)
++++|||-|-.=++.|+...-.+..+.++|+.++.-|..
T Consensus 109 vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 109 VVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred eEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 999999999999999995543334688888777666654
No 149
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.05 E-value=0.0025 Score=73.24 Aligned_cols=109 Identities=17% Similarity=0.275 Sum_probs=76.0
Q ss_pred cEEEEeCCCCCCChhHHHHHHHHHHHhCC-----cEEEEEcCCCCCCCCC------CCCC---------CcccCcHHHHH
Q 000293 217 TTLLLVPGTAEGSIEKRIRLFVCEALRRG-----FFPVVMNPRGCGGSPL------TTSR---------LFTAADSDDIC 276 (1712)
Q Consensus 217 PtVVLLHGltGGS~~sYir~La~~Llq~G-----YrVVVfD~RGhGgS~l------tspr---------ly~a~~tdDL~ 276 (1712)
-|.|++||. +|...+ +..++.++...+ --++..|--|.=.... ..|- .....+..=+.
T Consensus 46 iPTIfIhGs-gG~asS-~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk 123 (288)
T COG4814 46 IPTIFIHGS-GGTASS-LNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLK 123 (288)
T ss_pred cceEEEecC-CCChhH-HHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHH
Confidence 468999997 555544 566888887765 2256666666211110 0110 00011234467
Q ss_pred HHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCC---CCccEEEEecCCCC
Q 000293 277 TAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGER---TPLTAVTCIDNPFD 327 (1712)
Q Consensus 277 aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~---s~V~AaVlIS~P~D 327 (1712)
.++.+|.++|....+-+|||||||.-+..|+..++.+ .++...|.++.||+
T Consensus 124 ~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 124 KAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 8899999999999999999999999999999998765 26899999999998
No 150
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.05 E-value=0.037 Score=63.80 Aligned_cols=111 Identities=13% Similarity=0.097 Sum_probs=79.8
Q ss_pred CCCcEEEEeCCCCCCChhHHHHHHHHHHHhC---CcEEEEEcCCCCCCCCCCC---CCCc---ccCcHHHHHHHHHHHHh
Q 000293 214 GLDTTLLLVPGTAEGSIEKRIRLFVCEALRR---GFFPVVMNPRGCGGSPLTT---SRLF---TAADSDDICTAIQFIGK 284 (1712)
Q Consensus 214 ~~~PtVVLLHGltGGS~~sYir~La~~Llq~---GYrVVVfD~RGhGgS~lts---prly---~a~~tdDL~aVLd~I~k 284 (1712)
.+++.+++++|-+| . ..|+..+++.+.+. .+.++++-+-||.+-+... +... -+...+-+.+-++++++
T Consensus 27 ~~~~li~~IpGNPG-~-~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~ 104 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPG-L-LGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKE 104 (301)
T ss_pred CCceEEEEecCCCC-c-hhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHH
Confidence 35788999999875 3 34556677776653 2669999999998776221 1111 01234678888999988
Q ss_pred hCC-CCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCC
Q 000293 285 ARP-WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPF 326 (1712)
Q Consensus 285 ryP-~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~ 326 (1712)
..| ..+++++|||.|+.++++.+-......++..++++-|..
T Consensus 105 ~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 105 YVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred hCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 777 458999999999999999998655566788888885543
No 151
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.02 E-value=0.014 Score=66.67 Aligned_cols=217 Identities=13% Similarity=0.127 Sum_probs=111.1
Q ss_pred EEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCC--CcEEEEEe
Q 000293 219 LLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPW--TTLMSVGW 296 (1712)
Q Consensus 219 VVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~--spLvLVGh 296 (1712)
+|++=||. |+...++..++..-.+.|+.++++-.+-..-.- +. .....-+..+++.+.+.... .++++-.+
T Consensus 2 lvvl~gW~-gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~---~~---~~~~~~~~~l~~~l~~~~~~~~~~il~H~F 74 (240)
T PF05705_consen 2 LVVLLGWM-GAKPKHLAKYSDLYQDPGFDILLVTSPPADFFW---PS---KRLAPAADKLLELLSDSQSASPPPILFHSF 74 (240)
T ss_pred EEEEEeCC-CCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHee---ec---cchHHHHHHHHHHhhhhccCCCCCEEEEEE
Confidence 56666887 466667777777777899999988654321110 10 11122333455555443222 28999999
Q ss_pred cHHHHHHHHHHHH----c---CCCCC-ccEEEEecCCCChhh--hhcc----CchhhHhHH-HHHHHHHHHHHhhhhhhh
Q 000293 297 GYGANMLTKYLAE----V---GERTP-LTAVTCIDNPFDLEE--ATRS----SPHHIALDE-KLANGLIDILRSNKELFK 361 (1712)
Q Consensus 297 SMGG~IaL~YLge----~---ge~s~-V~AaVlIS~P~Dl~e--~~~s----l~~~~ly~~-~La~~Lk~~L~~~~~lf~ 361 (1712)
|.||...+..+.+ . +...+ ++|.|.-|+|-.... .... ++.... .+ .....+...+
T Consensus 75 SnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-------- 145 (240)
T PF05705_consen 75 SNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSP-RWFVPLWPLLQFL-------- 145 (240)
T ss_pred ECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccch-hhHHHHHHHHHHH--------
Confidence 9999888777652 1 11123 888888888743321 1100 000000 00 0000000000
Q ss_pred ccCCCCCHHHHhhhccHHHHHHHHhhhccchhcHHHHHhhcCcchhcCcCCccEEEEEe-CCCCCCCCChHH---HHHhc
Q 000293 362 GRAKGFDVEKALSAKSVRDFEKAISMVSYGFEAIEDFYSKSSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPR---SSIAE 437 (1712)
Q Consensus 362 ~~~~~~Die~IlkaktlrEFDd~~t~~~~Gf~sv~eYYr~aS~~~~L~kIkVPtLII~G-DDp~VP~~aip~---~la~~ 437 (1712)
+.. ..+.....++.....+++..-.........+|-|.|.+ .|+++|.+.+.. ...+.
T Consensus 146 ----------------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~ 207 (240)
T PF05705_consen 146 ----------------LRL--SIISYFIFGYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRK 207 (240)
T ss_pred ----------------HHH--HHHHHHHhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHc
Confidence 000 00001112333444444433222233455689999999 999999766543 22223
Q ss_pred CCCeEEEEecCCCccccCCCCchhHHHHHHHHHH
Q 000293 438 NPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEW 471 (1712)
Q Consensus 438 nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEF 471 (1712)
.-.+....+++..|+..... .++. +.+.+.+|
T Consensus 208 G~~V~~~~f~~S~HV~H~r~-~p~~-Y~~~v~~f 239 (240)
T PF05705_consen 208 GWDVRAEKFEDSPHVAHLRK-HPDR-YWRAVDEF 239 (240)
T ss_pred CCeEEEecCCCCchhhhccc-CHHH-HHHHHHhh
Confidence 33467777888888776542 2333 23566665
No 152
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.97 E-value=0.0039 Score=72.74 Aligned_cols=102 Identities=15% Similarity=0.179 Sum_probs=72.8
Q ss_pred cEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHH-HHHHHHHHHhhCCCCcEEEEE
Q 000293 217 TTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDD-ICTAIQFIGKARPWTTLMSVG 295 (1712)
Q Consensus 217 PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdD-L~aVLd~I~kryP~spLvLVG 295 (1712)
|+|+++||. +|... .+..|+..+... ..|+.++.||.+.-. ......+| +.+.++.|++..|..|++++|
T Consensus 1 ~pLF~fhp~-~G~~~-~~~~L~~~l~~~-~~v~~l~a~g~~~~~------~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G 71 (257)
T COG3319 1 PPLFCFHPA-GGSVL-AYAPLAAALGPL-LPVYGLQAPGYGAGE------QPFASLDDMAAAYVAAIRRVQPEGPYVLLG 71 (257)
T ss_pred CCEEEEcCC-CCcHH-HHHHHHHHhccC-ceeeccccCcccccc------cccCCHHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 579999996 34433 345577666555 999999999998521 11233444 446778888888999999999
Q ss_pred ecHHHHHHHHHHHHcC-CCCCccEEEEecCCCC
Q 000293 296 WGYGANMLTKYLAEVG-ERTPLTAVTCIDNPFD 327 (1712)
Q Consensus 296 hSMGG~IaL~YLge~g-e~s~V~AaVlIS~P~D 327 (1712)
||+||+++.-.+.+-- ....|.-++++.++..
T Consensus 72 ~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 72 WSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred eccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999999988886532 1125777788876665
No 153
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=96.87 E-value=0.0028 Score=71.92 Aligned_cols=41 Identities=10% Similarity=0.117 Sum_probs=25.4
Q ss_pred CcEEEEEecHHHHHHHHHHHHcCCC----C------CccEEEEecCCCChh
Q 000293 289 TTLMSVGWGYGANMLTKYLAEVGER----T------PLTAVTCIDNPFDLE 329 (1712)
Q Consensus 289 spLvLVGhSMGG~IaL~YLge~ge~----s------~V~AaVlIS~P~Dl~ 329 (1712)
.++.+|||||||.++-.++...... . .....+.++.|+-..
T Consensus 78 ~~IsfIgHSLGGli~r~al~~~~~~~~~~~~~~~~~~~~~fitlatPH~G~ 128 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYALGLLHDKPQYFPGFFQKIKPHNFITLATPHLGS 128 (217)
T ss_pred ccceEEEecccHHHHHHHHHHhhhccccccccccceeeeeEEEeCCCCCCC
Confidence 5899999999998875444432211 0 233445667776543
No 154
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=96.87 E-value=0.0022 Score=80.32 Aligned_cols=127 Identities=12% Similarity=-0.003 Sum_probs=75.9
Q ss_pred CcEEEEEecCCCcccccCCCCcEEEEeCCCCC--CChhHHHHHHHHHHHh-CC-cEEEEEcCC-CCCCCC-CCCCC-Ccc
Q 000293 196 GGVISLDWPSNLDLHEEHGLDTTLLLVPGTAE--GSIEKRIRLFVCEALR-RG-FFPVVMNPR-GCGGSP-LTTSR-LFT 268 (1712)
Q Consensus 196 Gg~LaLDW~~~~~~~~~~~~~PtVVLLHGltG--GS~~sYir~La~~Llq-~G-YrVVVfD~R-GhGgS~-ltspr-ly~ 268 (1712)
...+.++.+.+... ......|+||++||... |+...+ ....++. .+ +.||.+|+| |.-+-. ..... ..+
T Consensus 76 Edcl~l~i~~p~~~-~~~~~~pv~v~ihGG~~~~g~~~~~---~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n 151 (493)
T cd00312 76 EDCLYLNVYTPKNT-KPGNSLPVMVWIHGGGFMFGSGSLY---PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGN 151 (493)
T ss_pred CcCCeEEEEeCCCC-CCCCCCCEEEEEcCCccccCCCCCC---ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcc
Confidence 34566665544211 11245699999999521 222222 1223333 33 999999999 542221 00111 111
Q ss_pred cCcHHHHHHHHHHHHhhC-----CCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCC
Q 000293 269 AADSDDICTAIQFIGKAR-----PWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFD 327 (1712)
Q Consensus 269 a~~tdDL~aVLd~I~kry-----P~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~D 327 (1712)
. -..|...+++|+++.. ...++.++|+|.||..+..++.....+..+.++++.|.+..
T Consensus 152 ~-g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 152 Y-GLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred h-hHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 1 2579999999998752 23589999999999988877765333345888888876654
No 155
>PRK04940 hypothetical protein; Provisional
Probab=96.87 E-value=0.023 Score=63.18 Aligned_cols=36 Identities=14% Similarity=0.107 Sum_probs=28.3
Q ss_pred CcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChh
Q 000293 289 TTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLE 329 (1712)
Q Consensus 289 spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~ 329 (1712)
.++.+||.||||..+.+.+..++ + .+|+|.|.....
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g----~-~aVLiNPAv~P~ 95 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG----I-RQVIFNPNLFPE 95 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC----C-CEEEECCCCChH
Confidence 47899999999999998887775 3 367787766553
No 156
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.81 E-value=0.0052 Score=73.90 Aligned_cols=91 Identities=15% Similarity=0.205 Sum_probs=66.9
Q ss_pred CCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcE--EEEEcCCCCCCCCCCCCCCcc----cCcHHHHHHHHHHHHhhCCC
Q 000293 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFF--PVVMNPRGCGGSPLTTSRLFT----AADSDDICTAIQFIGKARPW 288 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYir~La~~Llq~GYr--VVVfD~RGhGgS~ltsprly~----a~~tdDL~aVLd~I~kryP~ 288 (1712)
.+..+||+||+.. +-+.-+.++++-+...|+. +|+|-|+--|.-- ...|. -....+++.+|.+|....+.
T Consensus 115 ~k~vlvFvHGfNn-tf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~---~Yn~DreS~~~Sr~aLe~~lr~La~~~~~ 190 (377)
T COG4782 115 AKTVLVFVHGFNN-TFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLL---GYNYDRESTNYSRPALERLLRYLATDKPV 190 (377)
T ss_pred CCeEEEEEcccCC-chhHHHHHHHHHHhhcCCCcceEEEEcCCCCeee---ecccchhhhhhhHHHHHHHHHHHHhCCCC
Confidence 4678999999854 4444455567666666654 8999999776521 11111 11247999999999998888
Q ss_pred CcEEEEEecHHHHHHHHHHHH
Q 000293 289 TTLMSVGWGYGANMLTKYLAE 309 (1712)
Q Consensus 289 spLvLVGhSMGG~IaL~YLge 309 (1712)
.++++++||||..+++..+.+
T Consensus 191 ~~I~ilAHSMGtwl~~e~LrQ 211 (377)
T COG4782 191 KRIYLLAHSMGTWLLMEALRQ 211 (377)
T ss_pred ceEEEEEecchHHHHHHHHHH
Confidence 899999999999999888765
No 157
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=96.79 E-value=0.0046 Score=72.72 Aligned_cols=105 Identities=12% Similarity=0.188 Sum_probs=69.6
Q ss_pred CCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCC------C-CCC---------CC-------ccc
Q 000293 213 HGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSP------L-TTS---------RL-------FTA 269 (1712)
Q Consensus 213 ~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~------l-tsp---------rl-------y~a 269 (1712)
.+.-|+|||-||+ ||+..-| ..++-.++++||-|.++.||.+..+- . ..+ +. ++.
T Consensus 115 ~~k~PvvvFSHGL-ggsRt~Y-Sa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~i 192 (399)
T KOG3847|consen 115 NDKYPVVVFSHGL-GGSRTLY-SAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHI 192 (399)
T ss_pred CCCccEEEEeccc-ccchhhH-HHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEe
Confidence 3457999999998 5676655 56888999999999999999987651 1 000 00 111
Q ss_pred C------cHHHHHHHHHHHHhhC-----------------------CCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEE
Q 000293 270 A------DSDDICTAIQFIGKAR-----------------------PWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVT 320 (1712)
Q Consensus 270 ~------~tdDL~aVLd~I~kry-----------------------P~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaV 320 (1712)
. ...++..++.-|.+-. .-.++.++|||+||..++..++.+ +.++++|
T Consensus 193 rNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~---t~FrcaI 269 (399)
T KOG3847|consen 193 RNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH---TDFRCAI 269 (399)
T ss_pred eCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc---cceeeee
Confidence 1 2345555555544311 124678999999999987777654 3577777
Q ss_pred Ee
Q 000293 321 CI 322 (1712)
Q Consensus 321 lI 322 (1712)
+.
T Consensus 270 ~l 271 (399)
T KOG3847|consen 270 AL 271 (399)
T ss_pred ee
Confidence 65
No 158
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=96.72 E-value=0.017 Score=72.64 Aligned_cols=142 Identities=12% Similarity=0.011 Sum_probs=83.5
Q ss_pred cceEEEEEEcCC---CcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHH-HH------------HHH--HHHHhCC
Q 000293 184 LEYQRVCVNTED---GGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKR-IR------------LFV--CEALRRG 245 (1712)
Q Consensus 184 v~YrRe~Ltt~D---Gg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sY-ir------------~La--~~Llq~G 245 (1712)
+....-+++..+ +..+.+..+... ....++|+||.++|++|.|.... +. .+. .+-..+-
T Consensus 45 ~~~~sGy~~v~~~~~~~~lFyw~~~s~---~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~ 121 (462)
T PTZ00472 45 VNQWSGYFDIPGNQTDKHYFYWAFGPR---NGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNE 121 (462)
T ss_pred CcceeEEEEeCCCCCCceEEEEEEEcC---CCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccc
Confidence 333455677754 455655333322 12345799999999887553210 00 000 0001223
Q ss_pred cEEEEEcC-CCCCCCCCCCCCCc--ccCcHHHHHHHHHHHHhhCCC---CcEEEEEecHHHHHHHHHHHHcC--------
Q 000293 246 FFPVVMNP-RGCGGSPLTTSRLF--TAADSDDICTAIQFIGKARPW---TTLMSVGWGYGANMLTKYLAEVG-------- 311 (1712)
Q Consensus 246 YrVVVfD~-RGhGgS~ltsprly--~a~~tdDL~aVLd~I~kryP~---spLvLVGhSMGG~IaL~YLge~g-------- 311 (1712)
..++.+|. +|+|.|........ .....+|+.+++..+.+++|. .+++++||||||..+-.++...-
T Consensus 122 ~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~ 201 (462)
T PTZ00472 122 AYVIYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDG 201 (462)
T ss_pred cCeEEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCC
Confidence 67888885 69998854332211 123468999999887777774 79999999999998877665521
Q ss_pred CCCCccEEEEecCCCCh
Q 000293 312 ERTPLTAVTCIDNPFDL 328 (1712)
Q Consensus 312 e~s~V~AaVlIS~P~Dl 328 (1712)
...+++++++-.+..+.
T Consensus 202 ~~inLkGi~IGNg~~dp 218 (462)
T PTZ00472 202 LYINLAGLAVGNGLTDP 218 (462)
T ss_pred ceeeeEEEEEeccccCh
Confidence 12357766544433343
No 159
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=96.68 E-value=0.005 Score=85.58 Aligned_cols=101 Identities=9% Similarity=0.079 Sum_probs=66.0
Q ss_pred CCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCccc-CcHHHHHHHHHHHHhhCCCCcEEE
Q 000293 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTA-ADSDDICTAIQFIGKARPWTTLMS 293 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a-~~tdDL~aVLd~I~kryP~spLvL 293 (1712)
.+++++++||+. |+.. .++.++..+ ..+|+|++++.+|++... +..+.. ...+|+.+.++ ...+..++++
T Consensus 1067 ~~~~l~~lh~~~-g~~~-~~~~l~~~l-~~~~~v~~~~~~g~~~~~---~~~~~l~~la~~~~~~i~---~~~~~~p~~l 1137 (1296)
T PRK10252 1067 DGPTLFCFHPAS-GFAW-QFSVLSRYL-DPQWSIYGIQSPRPDGPM---QTATSLDEVCEAHLATLL---EQQPHGPYHL 1137 (1296)
T ss_pred CCCCeEEecCCC-CchH-HHHHHHHhc-CCCCcEEEEECCCCCCCC---CCCCCHHHHHHHHHHHHH---hhCCCCCEEE
Confidence 357899999974 3433 456676655 567999999999998652 112221 12344444443 3345568999
Q ss_pred EEecHHHHHHHHHHHHcCC-CCCccEEEEecC
Q 000293 294 VGWGYGANMLTKYLAEVGE-RTPLTAVTCIDN 324 (1712)
Q Consensus 294 VGhSMGG~IaL~YLge~ge-~s~V~AaVlIS~ 324 (1712)
+||||||.++..++.+..+ ...+..++++.+
T Consensus 1138 ~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1138 LGYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred EEechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 9999999999998876322 135777776654
No 160
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=96.58 E-value=0.19 Score=63.29 Aligned_cols=83 Identities=14% Similarity=0.068 Sum_probs=58.9
Q ss_pred HHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHH----HHHHHHHhhCCCC-cEEEEEecHHHHHHHHHHHHcC
Q 000293 237 FVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDIC----TAIQFIGKARPWT-TLMSVGWGYGANMLTKYLAEVG 311 (1712)
Q Consensus 237 La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~----aVLd~I~kryP~s-pLvLVGhSMGG~IaL~YLge~g 311 (1712)
-+-.+++.|+-|+.+-+. +.+.|. ....|+. ++++.+..++|.. +.++||-.-||..++.|++.++
T Consensus 92 evG~AL~~GHPvYFV~F~-----p~P~pg----QTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~P 162 (581)
T PF11339_consen 92 EVGVALRAGHPVYFVGFF-----PEPEPG----QTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRP 162 (581)
T ss_pred HHHHHHHcCCCeEEEEec-----CCCCCC----CcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCc
Confidence 345567789888887765 212222 2344544 5666777888866 8899999999999999999998
Q ss_pred CCCCccEEEEecCCCChhh
Q 000293 312 ERTPLTAVTCIDNPFDLEE 330 (1712)
Q Consensus 312 e~s~V~AaVlIS~P~Dl~e 330 (1712)
+ .+.-+|+-++|.+...
T Consensus 163 d--~~gplvlaGaPlsywa 179 (581)
T PF11339_consen 163 D--LVGPLVLAGAPLSYWA 179 (581)
T ss_pred C--ccCceeecCCCccccc
Confidence 7 4555666678877765
No 161
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=96.50 E-value=0.012 Score=66.64 Aligned_cols=73 Identities=16% Similarity=0.099 Sum_probs=43.9
Q ss_pred CcchhcCcCC-ccEEEEEe-CCCCCCCCChHHH-HHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHH
Q 000293 403 STRSVVGNIK-IPVLFIQN-DAGAVPPFSIPRS-SIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAV 475 (1712)
Q Consensus 403 S~~~~L~kIk-VPtLII~G-DDp~VP~~aip~~-la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av 475 (1712)
+....+..|. +|+|++|| +|.++|....... ...........++++++|...........-..+.+.+||.+.
T Consensus 222 d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 222 DPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred cchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 3444555666 79999999 9999997543322 122221456677777778666432211112457788888754
No 162
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.33 E-value=0.065 Score=69.39 Aligned_cols=103 Identities=18% Similarity=0.260 Sum_probs=56.9
Q ss_pred CCcEEEEeCCCCCCChhHHHHHHHHHHHh----------------CCcEEEEEcCCC-----CCCCCCCCCCCcccCcHH
Q 000293 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALR----------------RGFFPVVMNPRG-----CGGSPLTTSRLFTAADSD 273 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYir~La~~Llq----------------~GYrVVVfD~RG-----hGgS~ltsprly~a~~td 273 (1712)
.+-+|+|+||-+ ||.. -+|.++..+.. ..|+..+.|+-+ ||++- ...++
T Consensus 88 sGIPVLFIPGNA-GSyK-QvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~~l--------~dQtE 157 (973)
T KOG3724|consen 88 SGIPVLFIPGNA-GSYK-QVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGHIL--------LDQTE 157 (973)
T ss_pred CCceEEEecCCC-CchH-HHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccHhH--------HHHHH
Confidence 457899999965 4433 26777655542 124444444432 11110 01234
Q ss_pred HHHHHHHHHHhhCC---------CCcEEEEEecHHHHHHHHHHHHcCC-CCCccEEEEecCCCC
Q 000293 274 DICTAIQFIGKARP---------WTTLMSVGWGYGANMLTKYLAEVGE-RTPLTAVTCIDNPFD 327 (1712)
Q Consensus 274 DL~aVLd~I~kryP---------~spLvLVGhSMGG~IaL~YLge~ge-~s~V~AaVlIS~P~D 327 (1712)
=+..+|.+|...|. ...+++|||||||.++...+..... +..|.-++..++|..
T Consensus 158 YV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~ 221 (973)
T KOG3724|consen 158 YVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHA 221 (973)
T ss_pred HHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCccc
Confidence 45567777765542 2349999999999887655543211 123555555566653
No 163
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=96.31 E-value=0.025 Score=70.25 Aligned_cols=110 Identities=20% Similarity=0.253 Sum_probs=70.0
Q ss_pred CcEEEEeCCCCCCChhHH-HH--HHHHHHHhCCcEEEEEcCCCCCCCCCCCCC------Ccc-cCcHHHHHHHHHHHHhh
Q 000293 216 DTTLLLVPGTAEGSIEKR-IR--LFVCEALRRGFFPVVMNPRGCGGSPLTTSR------LFT-AADSDDICTAIQFIGKA 285 (1712)
Q Consensus 216 ~PtVVLLHGltGGS~~sY-ir--~La~~Llq~GYrVVVfD~RGhGgS~ltspr------ly~-a~~tdDL~aVLd~I~kr 285 (1712)
+|++|++-| ++....+ +. .+...+.+.|=-++++.||-+|.|...... ..+ ....+|+..++++++.+
T Consensus 29 gpifl~~gg--E~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~ 106 (434)
T PF05577_consen 29 GPIFLYIGG--EGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKK 106 (434)
T ss_dssp SEEEEEE----SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECC--CCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHh
Confidence 566666644 6666543 21 123344556889999999999999532211 111 12358999999999976
Q ss_pred C---CCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChh
Q 000293 286 R---PWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLE 329 (1712)
Q Consensus 286 y---P~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~ 329 (1712)
+ +..|++++|-|+||+++..+-..+|+ .+.|+++-|+|....
T Consensus 107 ~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~--~~~ga~ASSapv~a~ 151 (434)
T PF05577_consen 107 YNTAPNSPWIVFGGSYGGALAAWFRLKYPH--LFDGAWASSAPVQAK 151 (434)
T ss_dssp TTTGCC--EEEEEETHHHHHHHHHHHH-TT--T-SEEEEET--CCHC
T ss_pred hcCCCCCCEEEECCcchhHHHHHHHhhCCC--eeEEEEeccceeeee
Confidence 5 45699999999999999988888886 689999999988764
No 164
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=96.23 E-value=0.01 Score=73.14 Aligned_cols=88 Identities=11% Similarity=0.075 Sum_probs=66.8
Q ss_pred HHHHHHHHHHhCCcEE-----EE-EcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHH
Q 000293 233 RIRLFVCEALRRGFFP-----VV-MNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKY 306 (1712)
Q Consensus 233 Yir~La~~Llq~GYrV-----VV-fD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~Y 306 (1712)
|+..++..|.+.||+. .+ +|+|=- +. ........+...|+.+.+.. ..++++|||||||.++..+
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~---~~-----~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~f 136 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLS---PA-----ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYF 136 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhc---hh-----hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHH
Confidence 6788999999988863 23 788832 11 11234577888898887766 6899999999999999999
Q ss_pred HHHcCCC----CCccEEEEecCCCChh
Q 000293 307 LAEVGER----TPLTAVTCIDNPFDLE 329 (1712)
Q Consensus 307 Lge~ge~----s~V~AaVlIS~P~Dl~ 329 (1712)
+...+.. ..|++.|.+++||...
T Consensus 137 l~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 137 LQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred HHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 9876432 3699999999999653
No 165
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=96.15 E-value=0.027 Score=71.21 Aligned_cols=140 Identities=21% Similarity=0.110 Sum_probs=89.9
Q ss_pred cceEEEEEEcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q 000293 184 LEYQRVCVNTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTT 263 (1712)
Q Consensus 184 v~YrRe~Ltt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~lts 263 (1712)
..-+...-+..||..|.|-.... + ......|++|.--|.-+-+...++.......+++|...|..|.||-|.-...-
T Consensus 392 ~~veQ~~atSkDGT~IPYFiv~K-~--~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~W 468 (648)
T COG1505 392 YEVEQFFATSKDGTRIPYFIVRK-G--AKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEW 468 (648)
T ss_pred ceEEEEEEEcCCCccccEEEEec-C--CcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHH
Confidence 44455667788999999865431 1 11125688887776544344433222336778999999999999988653110
Q ss_pred CC----CcccCcHHHHHHHHHHHHhhC--CCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCCh
Q 000293 264 SR----LFTAADSDDICTAIQFIGKAR--PWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDL 328 (1712)
Q Consensus 264 pr----ly~a~~tdDL~aVLd~I~kry--P~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl 328 (1712)
.+ .--..-.+|+.++.+.+.++. -..++.+.|-|=||.++...+.++|+ .+.|+||-.+..|+
T Consensus 469 H~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPe--lfgA~v~evPllDM 537 (648)
T COG1505 469 HQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPE--LFGAAVCEVPLLDM 537 (648)
T ss_pred HHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChh--hhCceeeccchhhh
Confidence 00 000112589999999987663 12479999999999888777777776 46566555444454
No 166
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=96.15 E-value=0.012 Score=73.70 Aligned_cols=128 Identities=12% Similarity=-0.016 Sum_probs=72.1
Q ss_pred cEEEEEecCCCcccccCCCCcEEEEeCCCC--CCChhHHHHHHHHHHHhCCcEEEEEcCC----CCCCCCCCCCCCcccC
Q 000293 197 GVISLDWPSNLDLHEEHGLDTTLLLVPGTA--EGSIEKRIRLFVCEALRRGFFPVVMNPR----GCGGSPLTTSRLFTAA 270 (1712)
Q Consensus 197 g~LaLDW~~~~~~~~~~~~~PtVVLLHGlt--GGS~~sYir~La~~Llq~GYrVVVfD~R----GhGgS~ltsprly~a~ 270 (1712)
..+.++.+.|.... ....-|++|+|||.. .|+.......-...+...+.-||.+||| |+-.++.......+.+
T Consensus 107 DCL~LnI~~P~~~~-~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~G 185 (535)
T PF00135_consen 107 DCLYLNIYTPSNAS-SNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYG 185 (535)
T ss_dssp ---EEEEEEETSSS-STTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHH
T ss_pred hHHHHhhhhccccc-cccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhh
Confidence 45667754442211 112469999999952 2233111112234567789999999999 4443321111111222
Q ss_pred cHHHHHHHHHHHHhhC---C--CCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCC
Q 000293 271 DSDDICTAIQFIGKAR---P--WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPF 326 (1712)
Q Consensus 271 ~tdDL~aVLd~I~kry---P--~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~ 326 (1712)
..|...+|+|+++.. + ..+|.++|+|-||..+...+.....+..+.++|+.|+..
T Consensus 186 -l~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 186 -LLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp -HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred -hhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 479999999998753 2 358999999999988877776633345799999998743
No 167
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=96.07 E-value=0.051 Score=67.62 Aligned_cols=105 Identities=11% Similarity=0.035 Sum_probs=65.3
Q ss_pred CCcEEEEeCCCCCCChhHHHHHHHHHHHhCCc----EEEEEcCCCC-CCCCCCCCCCccc-CcHHHH-HHHHHHHHhhCC
Q 000293 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGF----FPVVMNPRGC-GGSPLTTSRLFTA-ADSDDI-CTAIQFIGKARP 287 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYir~La~~Llq~GY----rVVVfD~RGh-GgS~ltsprly~a-~~tdDL-~aVLd~I~kryP 287 (1712)
..|+|+++||-.. .....+...+..+.+.|. -+|.+|..+. .++. .+.+. ...+.+ .+++-+|.++|+
T Consensus 208 ~~PvlyllDG~~w-~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~----el~~~~~f~~~l~~eLlP~I~~~y~ 282 (411)
T PRK10439 208 ERPLAILLDGQFW-AESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQ----ELPCNADFWLAVQQELLPQVRAIAP 282 (411)
T ss_pred CCCEEEEEECHHh-hhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccc----cCCchHHHHHHHHHHHHHHHHHhCC
Confidence 4689999999532 111123345556667773 3567775321 1111 11111 122333 456677887765
Q ss_pred C----CcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCC
Q 000293 288 W----TTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPF 326 (1712)
Q Consensus 288 ~----spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~ 326 (1712)
. .+.+++|+||||..++..+..+++ .+.+++++|+.+
T Consensus 283 ~~~d~~~~~IaG~S~GGl~AL~~al~~Pd--~Fg~v~s~Sgs~ 323 (411)
T PRK10439 283 FSDDADRTVVAGQSFGGLAALYAGLHWPE--RFGCVLSQSGSF 323 (411)
T ss_pred CCCCccceEEEEEChHHHHHHHHHHhCcc--cccEEEEeccce
Confidence 2 467999999999999988888876 688888888764
No 168
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=96.06 E-value=0.099 Score=62.82 Aligned_cols=109 Identities=20% Similarity=0.250 Sum_probs=73.1
Q ss_pred CCcEEEEeCCCCCCChh--HHHHHHHHHHHhCCcEEEEEcCCCC--CCCCCC-----------CCCC-------------
Q 000293 215 LDTTLLLVPGTAEGSIE--KRIRLFVCEALRRGFFPVVMNPRGC--GGSPLT-----------TSRL------------- 266 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~--sYir~La~~Llq~GYrVVVfD~RGh--GgS~lt-----------sprl------------- 266 (1712)
....|||+||... +.. ..+..+-..|-+.||.++.+..+.- ...+.. ....
T Consensus 86 ~~G~vIilp~~g~-~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 164 (310)
T PF12048_consen 86 PQGAVIILPDWGE-HPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQ 164 (310)
T ss_pred CceEEEEecCCCC-CCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCcccccc
Confidence 4568999999733 332 3477777889999999999999871 111100 0000
Q ss_pred -------cccCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCC
Q 000293 267 -------FTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPF 326 (1712)
Q Consensus 267 -------y~a~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~ 326 (1712)
|......-+.++++++.. ++..++++|||+.|+.++++|+.+.+. ..+.++|.|++.+
T Consensus 165 ~~~~~~~~~~~~~ari~Aa~~~~~~-~~~~~ivlIg~G~gA~~~~~~la~~~~-~~~daLV~I~a~~ 229 (310)
T PF12048_consen 165 EAEAREAYEERLFARIEAAIAFAQQ-QGGKNIVLIGHGTGAGWAARYLAEKPP-PMPDALVLINAYW 229 (310)
T ss_pred HhHHhHHHHHHHHHHHHHHHHHHHh-cCCceEEEEEeChhHHHHHHHHhcCCC-cccCeEEEEeCCC
Confidence 000112345566666655 455679999999999999999999764 3488999987654
No 169
>COG4099 Predicted peptidase [General function prediction only]
Probab=95.96 E-value=0.057 Score=63.58 Aligned_cols=128 Identities=10% Similarity=0.114 Sum_probs=71.0
Q ss_pred EcCCCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCC---Ccc
Q 000293 192 NTEDGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSR---LFT 268 (1712)
Q Consensus 192 tt~DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltspr---ly~ 268 (1712)
...-|..+.|..+.|.+-.+...--|.||++||...++...+ .++ ..|.-.++.+.+-.+ +-...|+ ++.
T Consensus 167 d~~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~-~~l-----~sg~gaiawa~pedq-cfVlAPQy~~if~ 239 (387)
T COG4099 167 DESTGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDND-KVL-----SSGIGAIAWAGPEDQ-CFVLAPQYNPIFA 239 (387)
T ss_pred ccccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhh-hhh-----hcCccceeeecccCc-eEEEccccccccc
Confidence 335578888887776432222223499999999644444333 211 233333333333222 1001111 111
Q ss_pred cC------cHHHHHHHHH-HHHhhCC--CCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCCh
Q 000293 269 AA------DSDDICTAIQ-FIGKARP--WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDL 328 (1712)
Q Consensus 269 a~------~tdDL~aVLd-~I~kryP--~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl 328 (1712)
.. .....-.+|+ -+..+|. ..||+++|.|+||...+.++.++|+ .+.|++.||..++-
T Consensus 240 d~e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPd--fFAaa~~iaG~~d~ 306 (387)
T COG4099 240 DSEEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD--FFAAAVPIAGGGDR 306 (387)
T ss_pred ccccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCch--hhheeeeecCCCch
Confidence 10 1111222222 4445554 4699999999999988877777776 68999999888763
No 170
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=95.96 E-value=0.17 Score=57.78 Aligned_cols=64 Identities=11% Similarity=0.010 Sum_probs=43.7
Q ss_pred cCcCCccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHHHhh
Q 000293 408 VGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVELG 478 (1712)
Q Consensus 408 L~kIkVPtLII~G-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~~~ 478 (1712)
.+.|++|.|-|.| .|.++|..... .++...++. .++...|||..-.. .. +.+.+.+||+.....
T Consensus 159 ~~~i~~PSLHi~G~~D~iv~~~~s~-~L~~~~~~a-~vl~HpggH~VP~~----~~-~~~~i~~fi~~~~~~ 223 (230)
T KOG2551|consen 159 KRPLSTPSLHIFGETDTIVPSERSE-QLAESFKDA-TVLEHPGGHIVPNK----AK-YKEKIADFIQSFLQE 223 (230)
T ss_pred ccCCCCCeeEEecccceeecchHHH-HHHHhcCCC-eEEecCCCccCCCc----hH-HHHHHHHHHHHHHHh
Confidence 4578999999999 89999875433 445677776 45555566644332 22 467899999876544
No 171
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=95.86 E-value=0.057 Score=58.08 Aligned_cols=84 Identities=14% Similarity=0.101 Sum_probs=53.5
Q ss_pred HHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHH-HHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCC
Q 000293 234 IRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDI-CTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGE 312 (1712)
Q Consensus 234 ir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL-~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge 312 (1712)
+..++..+. ..+.|++++.+|++.+..... ..+++ ...++.+....+..+++++||||||.++...+.....
T Consensus 15 ~~~~~~~l~-~~~~v~~~~~~g~~~~~~~~~------~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~ 87 (212)
T smart00824 15 YARLAAALR-GRRDVSALPLPGFGPGEPLPA------SADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEA 87 (212)
T ss_pred HHHHHHhcC-CCccEEEecCCCCCCCCCCCC------CHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHh
Confidence 445565554 468999999999986532211 12222 2344455555667789999999999999877765321
Q ss_pred -CCCccEEEEecC
Q 000293 313 -RTPLTAVTCIDN 324 (1712)
Q Consensus 313 -~s~V~AaVlIS~ 324 (1712)
...+.+++++..
T Consensus 88 ~~~~~~~l~~~~~ 100 (212)
T smart00824 88 RGIPPAAVVLLDT 100 (212)
T ss_pred CCCCCcEEEEEcc
Confidence 124666666643
No 172
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=95.83 E-value=0.021 Score=69.18 Aligned_cols=108 Identities=16% Similarity=0.204 Sum_probs=71.9
Q ss_pred CcEEEEeCCCCCCChhHHHHHHHHHHHhCCcE---EEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEE
Q 000293 216 DTTLLLVPGTAEGSIEKRIRLFVCEALRRGFF---PVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLM 292 (1712)
Q Consensus 216 ~PtVVLLHGltGGS~~sYir~La~~Llq~GYr---VVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spLv 292 (1712)
.-+++++||+ ++... .+..+...+...||- +..+++++..... + .....+-+..-|+.+....+..++.
T Consensus 59 ~~pivlVhG~-~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~---~~~~~~ql~~~V~~~l~~~ga~~v~ 130 (336)
T COG1075 59 KEPIVLVHGL-GGGYG-NFLPLDYRLAILGWLTNGVYAFELSGGDGTY---S---LAVRGEQLFAYVDEVLAKTGAKKVN 130 (336)
T ss_pred CceEEEEccC-cCCcc-hhhhhhhhhcchHHHhcccccccccccCCCc---c---ccccHHHHHHHHHHHHhhcCCCceE
Confidence 3489999997 33333 344455556677777 8888887651110 0 1112334445555555555567899
Q ss_pred EEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhh
Q 000293 293 SVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEA 331 (1712)
Q Consensus 293 LVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~ 331 (1712)
++||||||.++..|++..+....+...+.+++|......
T Consensus 131 LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt~~ 169 (336)
T COG1075 131 LIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGTEL 169 (336)
T ss_pred EEeecccchhhHHHHhhcCccceEEEEEEeccCCCCchh
Confidence 999999999999888887755679999999988765543
No 173
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.47 E-value=0.13 Score=58.15 Aligned_cols=115 Identities=14% Similarity=0.199 Sum_probs=72.4
Q ss_pred CcEEEEeCCCCCCCh-hHHHHH--------------HHHHHHhCCcEEEEEcCCCCCCC--CCCCCCCcccCcHHHHHHH
Q 000293 216 DTTLLLVPGTAEGSI-EKRIRL--------------FVCEALRRGFFPVVMNPRGCGGS--PLTTSRLFTAADSDDICTA 278 (1712)
Q Consensus 216 ~PtVVLLHGltGGS~-~sYir~--------------La~~Llq~GYrVVVfD~RGhGgS--~ltsprly~a~~tdDL~aV 278 (1712)
...+|+|||- |--. ..|.|+ ++.++.+.||.|+++|.--+-+- ....|..|.-.-.+-...+
T Consensus 101 ~kLlVLIHGS-GvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yv 179 (297)
T KOG3967|consen 101 QKLLVLIHGS-GVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYV 179 (297)
T ss_pred cceEEEEecC-ceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHH
Confidence 4689999994 2111 123333 46678899999999997643221 1223344433333444444
Q ss_pred HHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhh
Q 000293 279 IQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEA 331 (1712)
Q Consensus 279 Ld~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~ 331 (1712)
-.++-.-.....+++|.||.||...+..+.+++....|.++++..+++....+
T Consensus 180 w~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~p~a 232 (297)
T KOG3967|consen 180 WKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGSPQA 232 (297)
T ss_pred HHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccCchh
Confidence 44443222235799999999999999999999877778877777666554443
No 174
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.35 E-value=0.076 Score=64.14 Aligned_cols=93 Identities=18% Similarity=0.171 Sum_probs=72.2
Q ss_pred CcEEEEeCCCCCCChhHHHHHHHHHHHhC---C------cEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhC
Q 000293 216 DTTLLLVPGTAEGSIEKRIRLFVCEALRR---G------FFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKAR 286 (1712)
Q Consensus 216 ~PtVVLLHGltGGS~~sYir~La~~Llq~---G------YrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kry 286 (1712)
--+++++|||+| |-..+. .+++.|... | |.|+|+-.+|+|-|..++..-+++. -+..+++-+.-|.
T Consensus 152 v~PlLl~HGwPG-sv~EFy-kfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~---a~ArvmrkLMlRL 226 (469)
T KOG2565|consen 152 VKPLLLLHGWPG-SVREFY-KFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNAA---ATARVMRKLMLRL 226 (469)
T ss_pred ccceEEecCCCc-hHHHHH-hhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCccHH---HHHHHHHHHHHHh
Confidence 348999999986 544433 355555543 3 8899999999999987776666543 4566777777788
Q ss_pred CCCcEEEEEecHHHHHHHHHHHHcCCC
Q 000293 287 PWTTLMSVGWGYGANMLTKYLAEVGER 313 (1712)
Q Consensus 287 P~spLvLVGhSMGG~IaL~YLge~ge~ 313 (1712)
+..++++=|--+|+.|..+.+.-+|++
T Consensus 227 g~nkffiqGgDwGSiI~snlasLyPen 253 (469)
T KOG2565|consen 227 GYNKFFIQGGDWGSIIGSNLASLYPEN 253 (469)
T ss_pred CcceeEeecCchHHHHHHHHHhhcchh
Confidence 888999999999999999999998874
No 175
>PLN02606 palmitoyl-protein thioesterase
Probab=94.79 E-value=0.89 Score=54.57 Aligned_cols=108 Identities=12% Similarity=0.163 Sum_probs=62.3
Q ss_pred CcEEEEeCCCCCCChhHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCCCCCcc-c-CcHHHHHHHHHHHHhhCCCCcEE
Q 000293 216 DTTLLLVPGTAEGSIEKRIRLFVCEALR-RGFFPVVMNPRGCGGSPLTTSRLFT-A-ADSDDICTAIQFIGKARPWTTLM 292 (1712)
Q Consensus 216 ~PtVVLLHGltGGS~~sYir~La~~Llq-~GYrVVVfD~RGhGgS~ltsprly~-a-~~tdDL~aVLd~I~kryP~spLv 292 (1712)
..|||+.||+.......-+..+...+.+ .|+-+..+- .|-+.. ..++. . ..++.+++.|....+ .. .-+.
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~----~s~~~~~~~Qv~~vce~l~~~~~-L~-~G~n 98 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQ----DSLFMPLRQQASIACEKIKQMKE-LS-EGYN 98 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcc----cccccCHHHHHHHHHHHHhcchh-hc-CceE
Confidence 3579999998422222356667666642 355433332 332210 11111 1 123444444443222 22 2489
Q ss_pred EEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhh
Q 000293 293 SVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEE 330 (1712)
Q Consensus 293 LVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e 330 (1712)
+||||=||.++-.|+.+++...+|+-.|.+++|.....
T Consensus 99 aIGfSQGglflRa~ierc~~~p~V~nlISlggph~Gv~ 136 (306)
T PLN02606 99 IVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHAGVA 136 (306)
T ss_pred EEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcCCcc
Confidence 99999999998778877765357999999998875543
No 176
>PLN02633 palmitoyl protein thioesterase family protein
Probab=94.54 E-value=1.3 Score=53.43 Aligned_cols=107 Identities=9% Similarity=0.103 Sum_probs=62.7
Q ss_pred CcEEEEeCCCCCCChhHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCCCCCcccCc---HHHHHHHHHHHHhhCCCCcE
Q 000293 216 DTTLLLVPGTAEGSIEKRIRLFVCEALR-RGFFPVVMNPRGCGGSPLTTSRLFTAAD---SDDICTAIQFIGKARPWTTL 291 (1712)
Q Consensus 216 ~PtVVLLHGltGGS~~sYir~La~~Llq-~GYrVVVfD~RGhGgS~ltsprly~a~~---tdDL~aVLd~I~kryP~spL 291 (1712)
..++|+.||+.......-+..+...+.+ .|..+.++-. |.+. ...|.... ++.+++.|....+ .. .=+
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~---~~s~~~~~~~Qve~vce~l~~~~~-l~-~G~ 96 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGV---GDSWLMPLTQQAEIACEKVKQMKE-LS-QGY 96 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCc---cccceeCHHHHHHHHHHHHhhchh-hh-CcE
Confidence 3579999998433333356666655544 2455444322 2221 11122222 3444444443222 22 248
Q ss_pred EEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhh
Q 000293 292 MSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEE 330 (1712)
Q Consensus 292 vLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e 330 (1712)
.+||||-||.++-.|+.+++...+|.-.|.+++|.....
T Consensus 97 naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~Gv~ 135 (314)
T PLN02633 97 NIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHAGIS 135 (314)
T ss_pred EEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCCCee
Confidence 999999999998777777765357999999998875543
No 177
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=94.48 E-value=0.096 Score=55.76 Aligned_cols=54 Identities=13% Similarity=0.075 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCC--CCccEEEEecCCC
Q 000293 273 DDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGER--TPLTAVTCIDNPF 326 (1712)
Q Consensus 273 dDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~--s~V~AaVlIS~P~ 326 (1712)
..+...++....++|..+++++||||||.++...+...... ..+..+++.++|-
T Consensus 12 ~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 12 NLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 45666666666668999999999999999998877776442 2455666666664
No 178
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.40 E-value=0.42 Score=55.72 Aligned_cols=58 Identities=10% Similarity=0.037 Sum_probs=43.4
Q ss_pred EEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHHHh
Q 000293 416 LFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVEL 477 (1712)
Q Consensus 416 LII~G-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~~ 477 (1712)
.++.| +|..+|....+ .+.+..|++++...++||...|.. ..+. +.+.|.+-|++.++
T Consensus 310 ivv~A~~D~Yipr~gv~-~lQ~~WPg~eVr~~egGHVsayl~--k~dl-fRR~I~d~L~R~~k 368 (371)
T KOG1551|consen 310 IVVQAKEDAYIPRTGVR-SLQEIWPGCEVRYLEGGHVSAYLF--KQDL-FRRAIVDGLDRLDK 368 (371)
T ss_pred EEEEecCCccccccCcH-HHHHhCCCCEEEEeecCceeeeeh--hchH-HHHHHHHHHHhhhh
Confidence 34456 78889886655 345679999999999888877875 3344 47899999988774
No 179
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=94.35 E-value=0.21 Score=61.29 Aligned_cols=108 Identities=11% Similarity=0.132 Sum_probs=68.7
Q ss_pred CCcEEEEeCCCCCCChh----H---HHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCC
Q 000293 215 LDTTLLLVPGTAEGSIE----K---RIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARP 287 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~----s---Yir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP 287 (1712)
.+|+||.+||+ |-.- . ++..+. .+.. ...++++|+--...-. ....|. ....++.+..+++.+..+
T Consensus 121 ~DpVlIYlHGG--GY~l~~~p~qi~~L~~i~-~~l~-~~SILvLDYsLt~~~~--~~~~yP-tQL~qlv~~Y~~Lv~~~G 193 (374)
T PF10340_consen 121 SDPVLIYLHGG--GYFLGTTPSQIEFLLNIY-KLLP-EVSILVLDYSLTSSDE--HGHKYP-TQLRQLVATYDYLVESEG 193 (374)
T ss_pred CCcEEEEEcCC--eeEecCCHHHHHHHHHHH-HHcC-CCeEEEEecccccccc--CCCcCc-hHHHHHHHHHHHHHhccC
Confidence 46999999994 3211 1 122222 3333 5689999997553000 011111 234678888889886667
Q ss_pred CCcEEEEEecHHHHHHHHHHHHcCC---CCCccEEEEecCCCChh
Q 000293 288 WTTLMSVGWGYGANMLTKYLAEVGE---RTPLTAVTCIDNPFDLE 329 (1712)
Q Consensus 288 ~spLvLVGhSMGG~IaL~YLge~ge---~s~V~AaVlIS~P~Dl~ 329 (1712)
...++++|-|.||++++.++..... ...-+.+++|||-.++.
T Consensus 194 ~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 194 NKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred CCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 7899999999999999887754322 12357888998766664
No 180
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=93.79 E-value=0.11 Score=65.21 Aligned_cols=112 Identities=18% Similarity=0.144 Sum_probs=72.8
Q ss_pred CCcEEEEeCCCC--CCChhHHHHHHHHHHHhCC-cEEEEEcCC----CCCC-CCCCCCCCccc-CcHHHHHHHHHHHHhh
Q 000293 215 LDTTLLLVPGTA--EGSIEKRIRLFVCEALRRG-FFPVVMNPR----GCGG-SPLTTSRLFTA-ADSDDICTAIQFIGKA 285 (1712)
Q Consensus 215 ~~PtVVLLHGlt--GGS~~sYir~La~~Llq~G-YrVVVfD~R----GhGg-S~ltsprly~a-~~tdDL~aVLd~I~kr 285 (1712)
..|++|.|||.. +|+...... -...|+++| +-||.+||| |+-. +...+.+.++. .-..|...+|+|+++.
T Consensus 93 ~~PVmV~IHGG~y~~Gs~s~~~y-dgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~N 171 (491)
T COG2272 93 KLPVMVYIHGGGYIMGSGSEPLY-DGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDN 171 (491)
T ss_pred CCcEEEEEeccccccCCCccccc-ChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHH
Confidence 469999999952 223332211 234677777 999999999 3321 12222222221 1358999999999875
Q ss_pred ---CC--CCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCC
Q 000293 286 ---RP--WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFD 327 (1712)
Q Consensus 286 ---yP--~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~D 327 (1712)
++ ...+.++|+|-||+.++..++.-.....+..+++.|++..
T Consensus 172 Ie~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 172 IEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 32 3589999999999999988876322234777777777764
No 181
>KOG3101 consensus Esterase D [General function prediction only]
Probab=93.70 E-value=0.28 Score=55.60 Aligned_cols=113 Identities=18% Similarity=0.226 Sum_probs=57.8
Q ss_pred CcEEEEeCCCCCCChhHHHHH--HHHHHHhCCcEEEEEc--CCCCC---CCC----CCCCCCcccCcHHHH---HHHHHH
Q 000293 216 DTTLLLVPGTAEGSIEKRIRL--FVCEALRRGFFPVVMN--PRGCG---GSP----LTTSRLFTAADSDDI---CTAIQF 281 (1712)
Q Consensus 216 ~PtVVLLHGltGGS~~sYir~--La~~Llq~GYrVVVfD--~RGhG---gS~----ltsprly~a~~tdDL---~aVLd~ 281 (1712)
-|++..+.|++. ..+.++.. +-+.+.++|+.||.+| .||+- ... .....+|--+..+-. -.+-+|
T Consensus 44 ~P~lf~LSGLTC-T~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdY 122 (283)
T KOG3101|consen 44 CPVLFYLSGLTC-THENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDY 122 (283)
T ss_pred CceEEEecCCcc-cchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHH
Confidence 588999999975 44555432 2345677899999998 56652 111 001112211110000 112223
Q ss_pred HHhhC---------C--CCcEEEEEecHHHHHHHHHHHHcCCC-CCccEEEEecCCCChh
Q 000293 282 IGKAR---------P--WTTLMSVGWGYGANMLTKYLAEVGER-TPLTAVTCIDNPFDLE 329 (1712)
Q Consensus 282 I~kry---------P--~spLvLVGhSMGG~IaL~YLge~ge~-s~V~AaVlIS~P~Dl~ 329 (1712)
+.+.. | ..++.+.||||||.=++....+.+.. ..+.|..-||+|.+..
T Consensus 123 v~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cp 182 (283)
T KOG3101|consen 123 VVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCP 182 (283)
T ss_pred HHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCc
Confidence 22221 1 24688999999996544322222211 2355555666666554
No 182
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=93.53 E-value=0.68 Score=52.65 Aligned_cols=56 Identities=13% Similarity=0.048 Sum_probs=37.3
Q ss_pred CccEEEEEe-CCCCCCCCCh---HHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHHH
Q 000293 412 KIPVLFIQN-DAGAVPPFSI---PRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSA 474 (1712)
Q Consensus 412 kVPtLII~G-DDp~VP~~ai---p~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~a 474 (1712)
..|++..|| +|++||...- ...+......+++..+++-+|..... + ...+..|+.+
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~~-----e--~~~~~~~~~~ 203 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSPQ-----E--LDDLKSWIKT 203 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccccHH-----H--HHHHHHHHHH
Confidence 579999999 9999996422 12222333348888999977755542 1 3567788876
No 183
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=93.50 E-value=0.17 Score=52.56 Aligned_cols=37 Identities=19% Similarity=0.269 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHH
Q 000293 273 DDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAE 309 (1712)
Q Consensus 273 dDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge 309 (1712)
+.+...|..+.++++..++++.||||||.++...+..
T Consensus 48 ~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 48 DQILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 4555666667778888899999999999998877765
No 184
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=93.35 E-value=0.096 Score=66.97 Aligned_cols=88 Identities=15% Similarity=0.131 Sum_probs=61.7
Q ss_pred HHHHHHHHHhCCcE-----EEEEcCCCCCCCCCCCCCCc--ccCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHH
Q 000293 234 IRLFVCEALRRGFF-----PVVMNPRGCGGSPLTTSRLF--TAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKY 306 (1712)
Q Consensus 234 ir~La~~Llq~GYr-----VVVfD~RGhGgS~ltsprly--~a~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~Y 306 (1712)
|..++..|.+.||. ...||+| .+ +... ...+...+...|+.+.+.....++++|||||||.+++.+
T Consensus 158 w~kLIe~L~~iGY~~~nL~gAPYDWR---ls----~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyF 230 (642)
T PLN02517 158 WAVLIANLARIGYEEKNMYMAAYDWR---LS----FQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHF 230 (642)
T ss_pred HHHHHHHHHHcCCCCCceeecccccc---cC----ccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHH
Confidence 47889999999996 4445555 11 1111 123456788999988776666899999999999999888
Q ss_pred HHHcC----------C---CCCccEEEEecCCCCh
Q 000293 307 LAEVG----------E---RTPLTAVTCIDNPFDL 328 (1712)
Q Consensus 307 Lge~g----------e---~s~V~AaVlIS~P~Dl 328 (1712)
+.... . +..|++.|.|++||..
T Consensus 231 L~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 231 MKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred HHhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 76321 0 1248899999998855
No 185
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=93.22 E-value=0.81 Score=56.00 Aligned_cols=139 Identities=12% Similarity=0.067 Sum_probs=76.1
Q ss_pred EEEEcC--CCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHH-HHHHHHH---------------HHhCCcEEEE
Q 000293 189 VCVNTE--DGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKR-IRLFVCE---------------ALRRGFFPVV 250 (1712)
Q Consensus 189 e~Ltt~--DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sY-ir~La~~---------------Llq~GYrVVV 250 (1712)
-++... .+..+.+ |+...+ ....++|+||.+.|++|+|.... +....+. -..+-..++.
T Consensus 14 Gyl~~~~~~~~~lfy-w~~~s~--~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~ 90 (415)
T PF00450_consen 14 GYLPVNDNENAHLFY-WFFESR--NDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLF 90 (415)
T ss_dssp EEEEECTTTTEEEEE-EEEE-S--SGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEE
T ss_pred EEEecCCCCCcEEEE-EEEEeC--CCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEE
Confidence 345555 5566665 443222 13456799999999987554221 0000000 0112267889
Q ss_pred EcCC-CCCCCCCCCCCCccc---CcHHHHHHHHHHHHhhCC---CCcEEEEEecHHHHHHHHHHH---HcCC-----CCC
Q 000293 251 MNPR-GCGGSPLTTSRLFTA---ADSDDICTAIQFIGKARP---WTTLMSVGWGYGANMLTKYLA---EVGE-----RTP 315 (1712)
Q Consensus 251 fD~R-GhGgS~ltsprly~a---~~tdDL~aVLd~I~kryP---~spLvLVGhSMGG~IaL~YLg---e~ge-----~s~ 315 (1712)
+|+| |.|-|....+..+.. ...+|+..+|...-.++| ..++++.|.|+||..+-.++. +... ..+
T Consensus 91 iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~in 170 (415)
T PF00450_consen 91 IDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKIN 170 (415)
T ss_dssp E--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSE
T ss_pred EeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccc
Confidence 9944 999986544443222 235677777776666676 459999999999986544433 3332 346
Q ss_pred ccEEEEecCCCChhh
Q 000293 316 LTAVTCIDNPFDLEE 330 (1712)
Q Consensus 316 V~AaVlIS~P~Dl~e 330 (1712)
++|+++.++-.+...
T Consensus 171 LkGi~IGng~~dp~~ 185 (415)
T PF00450_consen 171 LKGIAIGNGWIDPRI 185 (415)
T ss_dssp EEEEEEESE-SBHHH
T ss_pred cccceecCccccccc
Confidence 888776665556543
No 186
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=92.85 E-value=0.2 Score=56.95 Aligned_cols=38 Identities=11% Similarity=0.206 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHc
Q 000293 273 DDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEV 310 (1712)
Q Consensus 273 dDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ 310 (1712)
.++...+..+.+++|..++++.||||||.++..++...
T Consensus 112 ~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 112 NQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred HHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHH
Confidence 45666666677778989999999999999998777653
No 187
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=92.75 E-value=0.076 Score=66.05 Aligned_cols=92 Identities=11% Similarity=0.018 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHhCCcE------EEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHH
Q 000293 232 KRIRLFVCEALRRGFF------PVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTK 305 (1712)
Q Consensus 232 sYir~La~~Llq~GYr------VVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~ 305 (1712)
.|+..++..+..-||. -+.||+|= |...+.+. ..+...+...|+...+.++..++++|+|||||.+.+.
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s~~~~e~r--d~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~ly 198 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRL---SYHNSEER--DQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLY 198 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhh---ccCChhHH--HHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHH
Confidence 4678888889988988 66788882 21111110 1234688899999888888889999999999999999
Q ss_pred HHHHcCCC------CCccEEEEecCCCCh
Q 000293 306 YLAEVGER------TPLTAVTCIDNPFDL 328 (1712)
Q Consensus 306 YLge~ge~------s~V~AaVlIS~P~Dl 328 (1712)
++...... ..+++.+.+++||-.
T Consensus 199 Fl~w~~~~~~~W~~k~I~sfvnig~p~lG 227 (473)
T KOG2369|consen 199 FLKWVEAEGPAWCDKYIKSFVNIGAPWLG 227 (473)
T ss_pred HHhcccccchhHHHHHHHHHHccCchhcC
Confidence 88876542 236777777777744
No 188
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=92.24 E-value=2.4 Score=50.18 Aligned_cols=45 Identities=13% Similarity=0.084 Sum_probs=34.2
Q ss_pred HHHHhhCC--CCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCC
Q 000293 280 QFIGKARP--WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPF 326 (1712)
Q Consensus 280 d~I~kryP--~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~ 326 (1712)
-+|..+|+ ..+-.++||||||.+++..+-.+++ .+....++|+.+
T Consensus 126 P~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~--~F~~y~~~SPSl 172 (264)
T COG2819 126 PFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPD--CFGRYGLISPSL 172 (264)
T ss_pred HHHhcccccCcccceeeeecchhHHHHHHHhcCcc--hhceeeeecchh
Confidence 35666664 3468999999999999998888754 577777777654
No 189
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=91.21 E-value=0.61 Score=57.46 Aligned_cols=109 Identities=16% Similarity=0.174 Sum_probs=75.9
Q ss_pred cEEEEeCCCCCCChhHH------HHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcc----------cCcHHHHHHHHH
Q 000293 217 TTLLLVPGTAEGSIEKR------IRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFT----------AADSDDICTAIQ 280 (1712)
Q Consensus 217 PtVVLLHGltGGS~~sY------ir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~----------a~~tdDL~aVLd 280 (1712)
.+|++--|- +|+.+++ ++.++. +.+--+|...||=+|.|..-..+.|. .....|+..+|.
T Consensus 81 gPIffYtGN-EGdie~Fa~ntGFm~D~Ap---~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~ 156 (492)
T KOG2183|consen 81 GPIFFYTGN-EGDIEWFANNTGFMWDLAP---ELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLT 156 (492)
T ss_pred CceEEEeCC-cccHHHHHhccchHHhhhH---hhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHH
Confidence 567777784 6776654 444443 44667999999999998432222111 123589999999
Q ss_pred HHHhhCC--CCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChhhh
Q 000293 281 FIGKARP--WTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLEEA 331 (1712)
Q Consensus 281 ~I~kryP--~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~ 331 (1712)
++++... ..|++++|-|+|||++.++=..+|. -+.|+.+-|+|.-..+.
T Consensus 157 ~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPH--iv~GAlAaSAPvl~f~d 207 (492)
T KOG2183|consen 157 FLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPH--IVLGALAASAPVLYFED 207 (492)
T ss_pred HHhhccccccCcEEEecCchhhHHHHHHHhcChh--hhhhhhhccCceEeecC
Confidence 9987643 5699999999999998877666764 57788877777644433
No 190
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=90.85 E-value=2.8 Score=46.94 Aligned_cols=106 Identities=21% Similarity=0.257 Sum_probs=63.4
Q ss_pred CcEEEEeCCCCCCChhHH----H---HHHHHHH------HhCCcEEEEEcCCCCCCCC-CCCCCCccc----CcHHHHHH
Q 000293 216 DTTLLLVPGTAEGSIEKR----I---RLFVCEA------LRRGFFPVVMNPRGCGGSP-LTTSRLFTA----ADSDDICT 277 (1712)
Q Consensus 216 ~PtVVLLHGltGGS~~sY----i---r~La~~L------lq~GYrVVVfD~RGhGgS~-ltsprly~a----~~tdDL~a 277 (1712)
+.+.+++||. +.+.... . ..+...+ ...+=++.++-|-|+- .| ......... .-..+|..
T Consensus 19 ~~Vav~VPG~-~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYd-aP~~~~~~a~~~~~A~~ga~~L~~ 96 (177)
T PF06259_consen 19 DHVAVLVPGT-GTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYD-APAGGLPDAASPGYARAGAPRLAR 96 (177)
T ss_pred CeeEEEcCCC-CCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCC-CCCCccccccCchHHHHHHHHHHH
Confidence 4688999996 3333321 1 1121111 1123467777777662 22 111111111 12368888
Q ss_pred HHHHHHhhC-CCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCC
Q 000293 278 AIQFIGKAR-PWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNP 325 (1712)
Q Consensus 278 VLd~I~kry-P~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P 325 (1712)
+++-|+... |..++.++|||+|+.++...+...+ ..+..++.+++|
T Consensus 97 f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~--~~vddvv~~GSP 143 (177)
T PF06259_consen 97 FLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGG--LRVDDVVLVGSP 143 (177)
T ss_pred HHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCC--CCcccEEEECCC
Confidence 888888777 7789999999999988887776622 367788888665
No 191
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=89.96 E-value=0.62 Score=47.30 Aligned_cols=58 Identities=21% Similarity=0.261 Sum_probs=45.2
Q ss_pred CccEEEEEe-CCCCCCCCChHHHHHhcCCCeEEEEecCCCccccCCCCchhHHHHHHHHHHHH
Q 000293 412 KIPVLFIQN-DAGAVPPFSIPRSSIAENPFTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLS 473 (1712)
Q Consensus 412 kVPtLII~G-DDp~VP~~aip~~la~~nPnv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~ 473 (1712)
..|+|+|++ .|+..|.... ..+++..++.+++..++.||+.+... ..-+.+.+.+||.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a-~~~~~~l~~s~lvt~~g~gHg~~~~~---s~C~~~~v~~yl~ 92 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGA-RAMAARLPGSRLVTVDGAGHGVYAGG---SPCVDKAVDDYLL 92 (103)
T ss_pred CCCEEEEecCcCCCCcHHHH-HHHHHHCCCceEEEEeccCcceecCC---ChHHHHHHHHHHH
Confidence 589999999 8999887644 34567789999999999999888521 2346778888885
No 192
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=89.33 E-value=0.47 Score=52.74 Aligned_cols=56 Identities=20% Similarity=0.271 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCC----CCCccEEEEecCCCC
Q 000293 272 SDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGE----RTPLTAVTCIDNPFD 327 (1712)
Q Consensus 272 tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge----~s~V~AaVlIS~P~D 327 (1712)
+.++...|+....+.|+.+++++|+|.|+.++...+...+- ..+|.++++++.|..
T Consensus 64 ~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 64 VANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 46788888877788999999999999999999999887211 136889999988865
No 193
>PF10086 DUF2324: Putative membrane peptidase family (DUF2324); InterPro: IPR011397 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. However, they are predicted to be integral membrane proteins (with several transmembrane segments).
Probab=89.19 E-value=4.1 Score=47.23 Aligned_cols=42 Identities=14% Similarity=0.056 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHhhcCCchhhHHHHHHHhhhcC
Q 000293 1568 GIVTATVVVLVEELLFRSWLPEEIAADLDYHRGIIISGLAFALSQR 1613 (1712)
Q Consensus 1568 ~llvallvgi~EELLFRG~L~~~L~~~~g~~~AiIISSLLFALlHl 1613 (1712)
++..++.+|+.||. .|=+.++.+.++...+.- .++.||+-|.
T Consensus 64 ~ly~~l~AGiFEE~-gR~i~~k~l~kk~~~~~~---~al~~GlGhG 105 (223)
T PF10086_consen 64 ALYGGLMAGIFEET-GRYIGFKYLLKKRRDWSD---DALAYGLGHG 105 (223)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHcccchhh---HHHHHHcchH
Confidence 56667888999994 355555555544443322 3455555554
No 194
>COG3150 Predicted esterase [General function prediction only]
Probab=88.98 E-value=1.6 Score=48.39 Aligned_cols=80 Identities=15% Similarity=0.083 Sum_probs=43.5
Q ss_pred EEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEEEEecH
Q 000293 219 LLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVGWGY 298 (1712)
Q Consensus 219 VVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spLvLVGhSM 298 (1712)
||.+|||.. |-.+.-..+.....+. |.|-++-+- |.+-+ +...+.+.++.+-..+......+||.|+
T Consensus 2 ilYlHGFnS-SP~shka~l~~q~~~~-------~~~~i~y~~---p~l~h--~p~~a~~ele~~i~~~~~~~p~ivGssL 68 (191)
T COG3150 2 ILYLHGFNS-SPGSHKAVLLLQFIDE-------DVRDIEYST---PHLPH--DPQQALKELEKAVQELGDESPLIVGSSL 68 (191)
T ss_pred eEEEecCCC-CcccHHHHHHHHHHhc-------cccceeeec---CCCCC--CHHHHHHHHHHHHHHcCCCCceEEeecc
Confidence 789999943 5444422233333232 333333332 11111 2233333343333334444579999999
Q ss_pred HHHHHHHHHHHcC
Q 000293 299 GANMLTKYLAEVG 311 (1712)
Q Consensus 299 GG~IaL~YLge~g 311 (1712)
||..+.+....++
T Consensus 69 GGY~At~l~~~~G 81 (191)
T COG3150 69 GGYYATWLGFLCG 81 (191)
T ss_pred hHHHHHHHHHHhC
Confidence 9999998887775
No 195
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=88.73 E-value=5.6 Score=45.90 Aligned_cols=78 Identities=15% Similarity=0.325 Sum_probs=48.9
Q ss_pred CcEEEEeCCCCCCChhHHHHHHHHHHHhCCcE-EEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEEE
Q 000293 216 DTTLLLVPGTAEGSIEKRIRLFVCEALRRGFF-PVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSV 294 (1712)
Q Consensus 216 ~PtVVLLHGltGGS~~sYir~La~~Llq~GYr-VVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spLvLV 294 (1712)
...||+.-|| |....-+.++. ...+|. ++++|||-.-- |. + + .. ...+.+|
T Consensus 11 ~~LilfF~GW--g~d~~~f~hL~---~~~~~D~l~~yDYr~l~~---------------d~----~-~-~~--y~~i~lv 62 (213)
T PF04301_consen 11 KELILFFAGW--GMDPSPFSHLI---LPENYDVLICYDYRDLDF---------------DF----D-L-SG--YREIYLV 62 (213)
T ss_pred CeEEEEEecC--CCChHHhhhcc---CCCCccEEEEecCccccc---------------cc----c-c-cc--CceEEEE
Confidence 4688889997 34444344332 234555 57789985421 11 0 1 12 3689999
Q ss_pred EecHHHHHHHHHHHHcCCCCCccEEEEecCC
Q 000293 295 GWGYGANMLTKYLAEVGERTPLTAVTCIDNP 325 (1712)
Q Consensus 295 GhSMGG~IaL~YLge~ge~s~V~AaVlIS~P 325 (1712)
+||||-.++.+++... ++..+++|...
T Consensus 63 AWSmGVw~A~~~l~~~----~~~~aiAINGT 89 (213)
T PF04301_consen 63 AWSMGVWAANRVLQGI----PFKRAIAINGT 89 (213)
T ss_pred EEeHHHHHHHHHhccC----CcceeEEEECC
Confidence 9999999988877543 46777777543
No 196
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=88.72 E-value=0.82 Score=52.76 Aligned_cols=51 Identities=20% Similarity=0.298 Sum_probs=35.9
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCC--CCCccEEEEecCC
Q 000293 274 DICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGE--RTPLTAVTCIDNP 325 (1712)
Q Consensus 274 DL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge--~s~V~AaVlIS~P 325 (1712)
...+.++.+.++++. ++++.|||+||++|...+....+ ..+|..+.+..+|
T Consensus 70 ~A~~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 70 SALAYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred HHHHHHHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 444555556666765 59999999999999877776443 2367777777555
No 197
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=88.64 E-value=0.94 Score=42.55 Aligned_cols=46 Identities=22% Similarity=0.228 Sum_probs=25.4
Q ss_pred cceEEEEEEcCCCcEEEEEecCCCc-ccccCCCCcEEEEeCCCCCCC
Q 000293 184 LEYQRVCVNTEDGGVISLDWPSNLD-LHEEHGLDTTLLLVPGTAEGS 229 (1712)
Q Consensus 184 v~YrRe~Ltt~DGg~LaLDW~~~~~-~~~~~~~~PtVVLLHGltGGS 229 (1712)
.+.+...+++.||-.+.+....+.. .......+|+|+|.||+.++|
T Consensus 10 Y~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss 56 (63)
T PF04083_consen 10 YPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSS 56 (63)
T ss_dssp ---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--G
T ss_pred CCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccCh
Confidence 4557888999999999987554432 222345689999999997543
No 198
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=88.56 E-value=2.6 Score=52.46 Aligned_cols=47 Identities=17% Similarity=0.064 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHhhCCC----CcEEEEEecHHHHHHHHHHHHcCCCCCccEEE
Q 000293 272 SDDICTAIQFIGKARPW----TTLMSVGWGYGANMLTKYLAEVGERTPLTAVT 320 (1712)
Q Consensus 272 tdDL~aVLd~I~kryP~----spLvLVGhSMGG~IaL~YLge~ge~s~V~AaV 320 (1712)
+-|+-.++.++.+++|. .|++++|+|.||.++...+.-.|- .+.+++
T Consensus 163 AiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~--~~~~~i 213 (403)
T PF11144_consen 163 AIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPW--LFDGVI 213 (403)
T ss_pred HHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCcc--ceeEEE
Confidence 34777777777777652 489999999999988665554432 354443
No 199
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=88.00 E-value=1.2 Score=54.97 Aligned_cols=81 Identities=19% Similarity=0.250 Sum_probs=58.5
Q ss_pred CcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEEEE
Q 000293 216 DTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVG 295 (1712)
Q Consensus 216 ~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spLvLVG 295 (1712)
+..-||..|= |.....-+....+|+++|+.||.+|---+==+. ++| ....+|+..+|++...++...++.++|
T Consensus 260 d~~av~~SGD--GGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~-rtP----e~~a~Dl~r~i~~y~~~w~~~~~~liG 332 (456)
T COG3946 260 DTVAVFYSGD--GGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSE-RTP----EQIAADLSRLIRFYARRWGAKRVLLIG 332 (456)
T ss_pred ceEEEEEecC--CchhhhhHHHHHHHHHCCCceeeeehhhhhhcc-CCH----HHHHHHHHHHHHHHHHhhCcceEEEEe
Confidence 3456677772 333445677889999999999999853221111 111 124589999999999999989999999
Q ss_pred ecHHHHHH
Q 000293 296 WGYGANML 303 (1712)
Q Consensus 296 hSMGG~Ia 303 (1712)
+|+|+-++
T Consensus 333 ySfGADvl 340 (456)
T COG3946 333 YSFGADVL 340 (456)
T ss_pred ecccchhh
Confidence 99999765
No 200
>PLN02454 triacylglycerol lipase
Probab=87.18 E-value=1.1 Score=55.94 Aligned_cols=38 Identities=13% Similarity=0.117 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHhhCCCCc--EEEEEecHHHHHHHHHHHH
Q 000293 272 SDDICTAIQFIGKARPWTT--LMSVGWGYGANMLTKYLAE 309 (1712)
Q Consensus 272 tdDL~aVLd~I~kryP~sp--LvLVGhSMGG~IaL~YLge 309 (1712)
.+++...|..+.++||..+ |++.||||||.+++..+..
T Consensus 209 r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 209 RSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3567777888888888765 9999999999999888755
No 201
>PLN02209 serine carboxypeptidase
Probab=85.31 E-value=5.8 Score=50.26 Aligned_cols=137 Identities=13% Similarity=0.043 Sum_probs=75.5
Q ss_pred EEEEcCC--CcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHH-HHHHHHH-------------H------HhCCc
Q 000293 189 VCVNTED--GGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKR-IRLFVCE-------------A------LRRGF 246 (1712)
Q Consensus 189 e~Ltt~D--Gg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sY-ir~La~~-------------L------lq~GY 246 (1712)
.+++..+ +..+.+ |+.... .....+|+|+.+-|++|.|.... +....+. + ..+-.
T Consensus 42 Gy~~v~~~~~~~lf~-~f~es~--~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~a 118 (437)
T PLN02209 42 GYIGIGEEENVQFFY-YFIKSD--KNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTA 118 (437)
T ss_pred EEEEecCCCCeEEEE-EEEecC--CCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcC
Confidence 3466644 444544 554322 12345799999999887554211 1111110 0 11225
Q ss_pred EEEEEc-CCCCCCCCCCCCCCccc--CcHHHHHHHHHHHHhhCC---CCcEEEEEecHHHHHHHHHHHHc---C-----C
Q 000293 247 FPVVMN-PRGCGGSPLTTSRLFTA--ADSDDICTAIQFIGKARP---WTTLMSVGWGYGANMLTKYLAEV---G-----E 312 (1712)
Q Consensus 247 rVVVfD-~RGhGgS~ltsprly~a--~~tdDL~aVLd~I~kryP---~spLvLVGhSMGG~IaL~YLge~---g-----e 312 (1712)
.++.+| .-|.|-|-...+..+.. ...+|+.++|...-+++| ..+++++|.|+||..+-.++..- . .
T Consensus 119 nllfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~ 198 (437)
T PLN02209 119 NIIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNP 198 (437)
T ss_pred cEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCC
Confidence 677888 56888874333322211 234677777776656676 35899999999998665554431 1 1
Q ss_pred CCCccEEEEecCCCCh
Q 000293 313 RTPLTAVTCIDNPFDL 328 (1712)
Q Consensus 313 ~s~V~AaVlIS~P~Dl 328 (1712)
..+++|+++..+..+.
T Consensus 199 ~inl~Gi~igng~td~ 214 (437)
T PLN02209 199 PINLQGYVLGNPITHI 214 (437)
T ss_pred ceeeeeEEecCcccCh
Confidence 2357776655544444
No 202
>PLN00413 triacylglycerol lipase
Probab=85.16 E-value=1.7 Score=54.92 Aligned_cols=35 Identities=17% Similarity=0.254 Sum_probs=29.3
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHH
Q 000293 274 DICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLA 308 (1712)
Q Consensus 274 DL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLg 308 (1712)
.+...+..+.+++|..++++.||||||+++..++.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 46666777777899999999999999999987765
No 203
>PLN02162 triacylglycerol lipase
Probab=85.12 E-value=1.8 Score=54.57 Aligned_cols=53 Identities=15% Similarity=0.149 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHH---cCCC---CCccEEEEecCC
Q 000293 273 DDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAE---VGER---TPLTAVTCIDNP 325 (1712)
Q Consensus 273 dDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge---~ge~---s~V~AaVlIS~P 325 (1712)
..+...+..+..++|..++++.||||||.+++.+++. .+.. .++.+++..++|
T Consensus 262 ~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqP 320 (475)
T PLN02162 262 YTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQP 320 (475)
T ss_pred HHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCC
Confidence 3456666666667888899999999999999886542 2221 124455666555
No 204
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=84.75 E-value=1.5 Score=50.12 Aligned_cols=84 Identities=17% Similarity=0.059 Sum_probs=52.8
Q ss_pred hCCcEEEEEcCCCCCCCCCC-C--C--CCcccCcHHHHHHHHHHHHhhCC-CCcEEEEEecHHHHHHHHHHHHcCC----
Q 000293 243 RRGFFPVVMNPRGCGGSPLT-T--S--RLFTAADSDDICTAIQFIGKARP-WTTLMSVGWGYGANMLTKYLAEVGE---- 312 (1712)
Q Consensus 243 q~GYrVVVfD~RGhGgS~lt-s--p--rly~a~~tdDL~aVLd~I~kryP-~spLvLVGhSMGG~IaL~YLge~ge---- 312 (1712)
..-.+|+++=||=....... . . ......-..|+.++.+|..++++ .+|++|+|||=|++++.+++.++-+
T Consensus 43 ~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~~~~~pl 122 (207)
T PF11288_consen 43 NGVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEEIAGDPL 122 (207)
T ss_pred hcCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHHhcCchH
Confidence 34467888877744322111 0 0 01111124799998887666664 5699999999999999999988522
Q ss_pred CCCccEEEEecCCC
Q 000293 313 RTPLTAVTCIDNPF 326 (1712)
Q Consensus 313 ~s~V~AaVlIS~P~ 326 (1712)
..++.++-+|+-+.
T Consensus 123 ~~rLVAAYliG~~v 136 (207)
T PF11288_consen 123 RKRLVAAYLIGYPV 136 (207)
T ss_pred HhhhheeeecCccc
Confidence 23566676665443
No 205
>COG0627 Predicted esterase [General function prediction only]
Probab=83.88 E-value=2.6 Score=51.21 Aligned_cols=38 Identities=8% Similarity=0.045 Sum_probs=30.8
Q ss_pred cEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChh
Q 000293 290 TLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLE 329 (1712)
Q Consensus 290 pLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~ 329 (1712)
...++||||||.=++.++..+++ ++..+..+++..+..
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd--~f~~~sS~Sg~~~~s 190 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPD--RFKSASSFSGILSPS 190 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcc--hhceecccccccccc
Confidence 67999999999999999999875 577777777666554
No 206
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=83.85 E-value=9 Score=48.54 Aligned_cols=112 Identities=20% Similarity=0.116 Sum_probs=65.0
Q ss_pred CCCcEEEEeCCCCCCChhH-HHHHHHHH-------------H------HhCCcEEEEEc-CCCCCCCCCCCCCCccc--C
Q 000293 214 GLDTTLLLVPGTAEGSIEK-RIRLFVCE-------------A------LRRGFFPVVMN-PRGCGGSPLTTSRLFTA--A 270 (1712)
Q Consensus 214 ~~~PtVVLLHGltGGS~~s-Yir~La~~-------------L------lq~GYrVVVfD-~RGhGgS~ltsprly~a--~ 270 (1712)
..+|+|+.+-|.+|.|... .+....+. + ..+-..++.+| .-|.|-|....+..+.. .
T Consensus 64 ~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~d~~ 143 (433)
T PLN03016 64 KEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKTGDIS 143 (433)
T ss_pred ccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCHH
Confidence 4579999999988755421 11111111 0 11225688888 66888885433322221 1
Q ss_pred cHHHHHHHHHHHHhhCC---CCcEEEEEecHHHHHHHHHHHHc--C------CCCCccEEEEecCCC
Q 000293 271 DSDDICTAIQFIGKARP---WTTLMSVGWGYGANMLTKYLAEV--G------ERTPLTAVTCIDNPF 326 (1712)
Q Consensus 271 ~tdDL~aVLd~I~kryP---~spLvLVGhSMGG~IaL~YLge~--g------e~s~V~AaVlIS~P~ 326 (1712)
..+|+..++...-+++| ..+++++|.|+||..+-..+.+- . ...+++|+++ ++++
T Consensus 144 ~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~i-GNg~ 209 (433)
T PLN03016 144 EVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYML-GNPV 209 (433)
T ss_pred HHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEe-cCCC
Confidence 23577777766556666 46899999999998665554431 1 1235766654 4554
No 207
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=83.66 E-value=69 Score=39.01 Aligned_cols=53 Identities=19% Similarity=0.216 Sum_probs=38.0
Q ss_pred HHHHHHhhHHHHHhhcCCchhhHHHHHHHhhhcCCcc-hHHHHHHHHHHHHHHHH
Q 000293 1580 ELLFRSWLPEEIAADLDYHRGIIISGLAFALSQRSPQ-AIPGLWLLSLALAGVRQ 1633 (1712)
Q Consensus 1580 ELLFRG~L~~~L~~~~g~~~AiIISSLLFALlHltl~-~~i~lfLlGLvLa~ay~ 1633 (1712)
.+-.||..+-.+..-.| +.++++.+++=-+.++.+. .++++++.-++|..++.
T Consensus 152 ~lN~r~a~LHvl~D~Lg-sv~vIia~i~i~~~~w~~~Dpi~si~i~~lil~~a~~ 205 (296)
T COG1230 152 NLNMRGAYLHVLGDALG-SVGVIIAAIVIRFTGWSWLDPILSIVIALLILSSAWP 205 (296)
T ss_pred cchHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCCccchHHHHHHHHHHHHHHHH
Confidence 59999999999988777 6788888888888888654 34445444455555443
No 208
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=83.14 E-value=0.95 Score=57.97 Aligned_cols=124 Identities=14% Similarity=0.062 Sum_probs=67.5
Q ss_pred cEEEEEecCCCcccccCCCCcEEEEeCCCCC--CChhHH-HHHHHHHHHhCCcEEEEEcCC----CCCCCCCCCCCCccc
Q 000293 197 GVISLDWPSNLDLHEEHGLDTTLLLVPGTAE--GSIEKR-IRLFVCEALRRGFFPVVMNPR----GCGGSPLTTSRLFTA 269 (1712)
Q Consensus 197 g~LaLDW~~~~~~~~~~~~~PtVVLLHGltG--GS~~sY-ir~La~~Llq~GYrVVVfD~R----GhGgS~ltsprly~a 269 (1712)
..+.+-.+.+...... . -|++|++||..- |+...+ .......+..+..-||.+++| |+.... ......++
T Consensus 95 DCLylNV~tp~~~~~~-~-~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~-d~~~~gN~ 171 (545)
T KOG1516|consen 95 DCLYLNVYTPQGCSES-K-LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTG-DSAAPGNL 171 (545)
T ss_pred CCceEEEeccCCCccC-C-CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecC-CCCCCCcc
Confidence 3455556654321111 1 699999999521 121111 222233444557889999999 332221 11111222
Q ss_pred CcHHHHHHHHHHHHhhC-----CCCcEEEEEecHHHHHHHHHHHHcC-CCCCccEEEEecCC
Q 000293 270 ADSDDICTAIQFIGKAR-----PWTTLMSVGWGYGANMLTKYLAEVG-ERTPLTAVTCIDNP 325 (1712)
Q Consensus 270 ~~tdDL~aVLd~I~kry-----P~spLvLVGhSMGG~IaL~YLge~g-e~s~V~AaVlIS~P 325 (1712)
+ ..|...+++|+++.. ...++.++|||.||..+-..+ -.+ .+..+..+++.|..
T Consensus 172 g-l~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~-~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 172 G-LFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLT-LSPHSRGLFHKAISMSGN 231 (545)
T ss_pred c-HHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHh-cCHhhHHHHHHHHhhccc
Confidence 2 359999999998753 245899999999997764333 222 11235555555543
No 209
>PLN02934 triacylglycerol lipase
Probab=83.06 E-value=2.1 Score=54.62 Aligned_cols=37 Identities=8% Similarity=0.138 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHH
Q 000293 273 DDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAE 309 (1712)
Q Consensus 273 dDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge 309 (1712)
..+...|+.+.+++|..++++.||||||.+++.++..
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHHH
Confidence 3467777777788999999999999999999877643
No 210
>PRK00068 hypothetical protein; Validated
Probab=83.03 E-value=15 Score=50.49 Aligned_cols=15 Identities=13% Similarity=0.116 Sum_probs=9.7
Q ss_pred cchHHHHHHhHHhhh
Q 000293 1638 SLSVPIGLRTGIMAS 1652 (1712)
Q Consensus 1638 SLWlpIGLHagWn~~ 1652 (1712)
++..+...|.+...+
T Consensus 206 ~~~~~ar~hl~~l~~ 220 (970)
T PRK00068 206 GISRFARKQLAVLAG 220 (970)
T ss_pred CCCHHHHHHHHHHHH
Confidence 566677788765543
No 211
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=83.02 E-value=13 Score=46.10 Aligned_cols=68 Identities=15% Similarity=0.085 Sum_probs=47.2
Q ss_pred cCcchhcCcCCccEEEEEe-CCCCCCCCChHHHHHhcCC-CeEEEEecCCCccccCCCCchhHHHHHHHHHHHHHHH
Q 000293 402 SSTRSVVGNIKIPVLFIQN-DAGAVPPFSIPRSSIAENP-FTSLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVE 476 (1712)
Q Consensus 402 aS~~~~L~kIkVPtLII~G-DDp~VP~~aip~~la~~nP-nv~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~ 476 (1712)
.++..+..++++|-++|+| .|++..+....... ...| ...+.+.|..+|..... -+...+..|+.++.
T Consensus 252 vDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~-d~L~G~K~lr~vPN~~H~~~~~------~~~~~l~~f~~~~~ 321 (367)
T PF10142_consen 252 VDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYY-DKLPGEKYLRYVPNAGHSLIGS------DVVQSLRAFYNRIQ 321 (367)
T ss_pred cCHHHHHHhcCccEEEEecCCCceeccCchHHHH-hhCCCCeeEEeCCCCCcccchH------HHHHHHHHHHHHHH
Confidence 3455566788999999999 89887776655443 4455 45678889988866552 24566777777653
No 212
>COG2339 prsW Membrane proteinase, regulator of anti-sigma factor [Posttranslational modification, protein turnover, chaperones]
Probab=82.30 E-value=56 Score=39.33 Aligned_cols=14 Identities=43% Similarity=0.406 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHH
Q 000293 1569 IVTATVVVLVEELL 1582 (1712)
Q Consensus 1569 llvallvgi~EELL 1582 (1712)
+..++.+|+.||..
T Consensus 108 l~~al~~G~vEE~~ 121 (274)
T COG2339 108 LGSALLAGLVEEPL 121 (274)
T ss_pred HHHHHhhhhhHHHH
Confidence 44567789999964
No 213
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=82.30 E-value=6.8 Score=46.49 Aligned_cols=105 Identities=10% Similarity=0.106 Sum_probs=62.7
Q ss_pred cEEEEeCCCCCCChhHHHHHHHHHHHh-CCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHh--hCCCCcEEE
Q 000293 217 TTLLLVPGTAEGSIEKRIRLFVCEALR-RGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGK--ARPWTTLMS 293 (1712)
Q Consensus 217 PtVVLLHGltGGS~~sYir~La~~Llq-~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~k--ryP~spLvL 293 (1712)
-++|++||+...+...-+..+.+.+.+ .|..|.+++. |-| . .+-+..-..+-+..+.+.+++ ..+ .-+.+
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g---~--~~s~l~pl~~Qv~~~ce~v~~m~~ls-qGyni 96 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG---I--KDSSLMPLWEQVDVACEKVKQMPELS-QGYNI 96 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC---c--chhhhccHHHHHHHHHHHHhcchhcc-CceEE
Confidence 579999998544433336666655554 3666666664 333 0 111112222333344444442 222 35899
Q ss_pred EEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChh
Q 000293 294 VGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLE 329 (1712)
Q Consensus 294 VGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~ 329 (1712)
||+|-||.++ +.+.+..+..++.-.|.+++|.-..
T Consensus 97 vg~SQGglv~-Raliq~cd~ppV~n~ISL~gPhaG~ 131 (296)
T KOG2541|consen 97 VGYSQGGLVA-RALIQFCDNPPVKNFISLGGPHAGI 131 (296)
T ss_pred EEEccccHHH-HHHHHhCCCCCcceeEeccCCcCCc
Confidence 9999999765 6666665667899999998886443
No 214
>PRK04214 rbn ribonuclease BN/unknown domain fusion protein; Reviewed
Probab=82.28 E-value=36 Score=42.87 Aligned_cols=60 Identities=22% Similarity=0.288 Sum_probs=40.1
Q ss_pred HHHHHHHhhcccCcchhhhhHHHHHhhccccccchhHHHHHHHHh--hcCchhHHHHHHHHHH
Q 000293 1379 RLVAMLADLGQKGGLLKLVGKLALLWGGLRGAMSLTEKLILFLHL--ADRPLLQRILGFVGMV 1439 (1712)
Q Consensus 1379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~slt~~~~~~~~~--~~~P~~~rIilFllml 1439 (1712)
.+...+.++-+..|-|-.+|=+.|+|+.+.+..++ ++-+|..+= ..+|.+.|++.|..++
T Consensus 86 ~i~~~l~~~~~~~~~l~~ig~~~ll~ta~~~~~~i-e~a~N~Iw~v~~~R~~~~~~~~~~~vl 147 (412)
T PRK04214 86 SVFDYLNQFREQAGRLTAAGSVALVVTLLILLHTI-EQTFNRIWRVNSARPWLTRFLVYWTVL 147 (412)
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCCCCCcHHHHHHHHHHHH
Confidence 45556666655667788999999999988766555 445554432 4567888877654433
No 215
>COG1295 Rbn Ribonuclease BN family enzyme [Replication, recombination, and repair]
Probab=81.97 E-value=27 Score=42.21 Aligned_cols=44 Identities=25% Similarity=0.440 Sum_probs=31.2
Q ss_pred hcccCcchhhhhHHHHHhhccccccchhHHHHHHHH-hhc-CchhHH
Q 000293 1387 LGQKGGLLKLVGKLALLWGGLRGAMSLTEKLILFLH-LAD-RPLLQR 1431 (1712)
Q Consensus 1387 ~~~~~~~~~~~~~~~~~~~~~~~~~slt~~~~~~~~-~~~-~P~~~r 1431 (1712)
+.|++|.+-.+|=++++|.|.+|-=++ ++=+|.-+ ..+ ++.+.+
T Consensus 95 ~~~~~~~~~~~g~~~~lwtas~~~~al-~~~lN~i~~~~~~r~~~~~ 140 (303)
T COG1295 95 LSQSRGSLLSLGLVVALWTASNGMSAL-RDALNKIWRVKPRRSFIRR 140 (303)
T ss_pred hcCCCCCcHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCCCCCchHHH
Confidence 456677776679999999999998888 66666655 333 444443
No 216
>PLN02408 phospholipase A1
Probab=80.42 E-value=2.8 Score=51.74 Aligned_cols=38 Identities=16% Similarity=0.124 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHhhCCCC--cEEEEEecHHHHHHHHHHHHc
Q 000293 273 DDICTAIQFIGKARPWT--TLMSVGWGYGANMLTKYLAEV 310 (1712)
Q Consensus 273 dDL~aVLd~I~kryP~s--pLvLVGhSMGG~IaL~YLge~ 310 (1712)
+.+.+.|..+.+.||.. .|++.||||||.+++..+...
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 45566666677778754 599999999999998877653
No 217
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=79.70 E-value=6.6 Score=49.94 Aligned_cols=91 Identities=12% Similarity=0.090 Sum_probs=68.8
Q ss_pred HHHHHHhCCcEEEEEcCCCCCCCCCCCCCCc-------ccCcHHHHHHHHHHHHhhCCC---CcEEEEEecHHHHHHHHH
Q 000293 237 FVCEALRRGFFPVVMNPRGCGGSPLTTSRLF-------TAADSDDICTAIQFIGKARPW---TTLMSVGWGYGANMLTKY 306 (1712)
Q Consensus 237 La~~Llq~GYrVVVfD~RGhGgS~ltsprly-------~a~~tdDL~aVLd~I~kryP~---spLvLVGhSMGG~IaL~Y 306 (1712)
+...+.+.|-.|+.+.||=+|.|......-. ......|+.++|+.+..+++. .|.+.+|-|+-|.++.+.
T Consensus 110 ~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~ 189 (514)
T KOG2182|consen 110 WLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWF 189 (514)
T ss_pred HHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHH
Confidence 4556678899999999999998843222111 112358999999999998852 389999999999998877
Q ss_pred HHHcCCCCCccEEEEecCCCChh
Q 000293 307 LAEVGERTPLTAVTCIDNPFDLE 329 (1712)
Q Consensus 307 Lge~ge~s~V~AaVlIS~P~Dl~ 329 (1712)
=..+|+ .+.|+|+-|+|....
T Consensus 190 R~~yPe--l~~GsvASSapv~A~ 210 (514)
T KOG2182|consen 190 REKYPE--LTVGSVASSAPVLAK 210 (514)
T ss_pred HHhCch--hheeecccccceeEE
Confidence 777776 688888888887553
No 218
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=79.61 E-value=3.1 Score=49.29 Aligned_cols=53 Identities=15% Similarity=0.196 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChh
Q 000293 272 SDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLE 329 (1712)
Q Consensus 272 tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~ 329 (1712)
..+...++..+++.||..++.+.|||+||.++...-..++ +- +|+..+|-+..
T Consensus 259 ySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg----lP-~VaFesPGd~~ 311 (425)
T KOG4540|consen 259 YSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG----LP-VVAFESPGDAY 311 (425)
T ss_pred hHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC----Cc-eEEecCchhhh
Confidence 3456667777888899999999999999998765444444 22 45566665544
No 219
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=79.61 E-value=3.1 Score=49.29 Aligned_cols=53 Identities=15% Similarity=0.196 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChh
Q 000293 272 SDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLE 329 (1712)
Q Consensus 272 tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~ 329 (1712)
..+...++..+++.||..++.+.|||+||.++...-..++ +- +|+..+|-+..
T Consensus 259 ySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg----lP-~VaFesPGd~~ 311 (425)
T COG5153 259 YSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG----LP-VVAFESPGDAY 311 (425)
T ss_pred hHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC----Cc-eEEecCchhhh
Confidence 3456667777888899999999999999998765444444 22 45566665544
No 220
>PF03631 Virul_fac_BrkB: Virulence factor BrkB; InterPro: IPR017039 This entry represents the uncharacterised protein family UPF0761. It includes the E. coli gene product of yihY, and was previously thought to be a family of tRNA-processing ribonuclease BN proteins []. This has been shown to be incorrect [].; GO: 0004540 ribonuclease activity
Probab=79.27 E-value=96 Score=36.20 Aligned_cols=61 Identities=26% Similarity=0.350 Sum_probs=39.3
Q ss_pred HHHHHHHHhhcccCcchhhhhHHHHHhhccccccchhHHHHHHHHh--hc-CchhHHHHHHHHHH
Q 000293 1378 ERLVAMLADLGQKGGLLKLVGKLALLWGGLRGAMSLTEKLILFLHL--AD-RPLLQRILGFVGMV 1439 (1712)
Q Consensus 1378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~slt~~~~~~~~~--~~-~P~~~rIilFllml 1439 (1712)
+-+..++..+-+.+ -+.++|=+.++|++.++.-++-+-+-.-.+. .+ ++.+.+.+..++++
T Consensus 57 ~~l~~~l~~~~~~~-~~~~i~~~~ll~~a~~~~~~l~~a~~~i~~~~~~~~r~~~~~~~~~~~~~ 120 (260)
T PF03631_consen 57 EQLESFLEQISSSS-SLGLIGILILLWSASSFFASLQRALNRIYGVPPRERRSFWKRRLIALLFL 120 (260)
T ss_pred hhHHHHHHHHHhcc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCHHHHHHHHHHHH
Confidence 45556664444444 7788999999999999998886665555555 33 44555544433333
No 221
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=79.27 E-value=1.6 Score=52.05 Aligned_cols=40 Identities=15% Similarity=0.385 Sum_probs=28.1
Q ss_pred CcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChh
Q 000293 289 TTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLE 329 (1712)
Q Consensus 289 spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~ 329 (1712)
.-+.+||||=||.++-.|+.+++. .+|.-.|.+++|....
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~-~~V~nlISlggph~Gv 119 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCND-PPVHNLISLGGPHMGV 119 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TS-S-EEEEEEES--TT-B
T ss_pred cceeeeeeccccHHHHHHHHHCCC-CCceeEEEecCccccc
Confidence 358999999999988777777754 4799999999887544
No 222
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=79.02 E-value=0.62 Score=54.53 Aligned_cols=28 Identities=21% Similarity=0.347 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHhheeecccCCcccccccc
Q 000293 1472 IVGLYIAVMILTMKWGRRVRGYENSLEQYGLDI 1504 (1712)
Q Consensus 1472 lv~Lyla~lILlilW~~~~~~~r~pls~lGL~~ 1504 (1712)
++.+++.+++.+.+|+. .+. +++||-.+
T Consensus 109 i~~l~l~~lLaL~vW~Y-m~l----Lr~~GAs~ 136 (381)
T PF05297_consen 109 IVILFLCCLLALGVWFY-MWL----LRELGASF 136 (381)
T ss_dssp ---------------------------------
T ss_pred HHHHHHHHHHHHHHHHH-HHH----HHHhhhHH
Confidence 33333333444455554 222 55677654
No 223
>TIGR00766 ribonuclease, putative. This family shows similarity to ribonuclease BN
Probab=77.87 E-value=61 Score=38.16 Aligned_cols=53 Identities=19% Similarity=0.170 Sum_probs=32.4
Q ss_pred HHHHHHhhcccCcchhhhhHHHHHhhccccccchhHHHHHHHH-h---hcCchhHHHH
Q 000293 1380 LVAMLADLGQKGGLLKLVGKLALLWGGLRGAMSLTEKLILFLH-L---ADRPLLQRIL 1433 (1712)
Q Consensus 1380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~slt~~~~~~~~-~---~~~P~~~rIi 1433 (1712)
+...+.++-.+++.+-.+|=+.++|++.++..++- |-+|..+ . .+++.+.|.+
T Consensus 70 v~~~l~~~~~~~~~l~~ig~~~ll~tas~~~~~l~-~aln~i~~~~~~~~~~~~~~~l 126 (263)
T TIGR00766 70 LKNTMNTAVDARTTVGLIGLATALYSGLNWMGNLR-EAISDVWERPPAPAEKLRTKYL 126 (263)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCCCCCCcchHHHHH
Confidence 34444444333345578899999999999888874 4445544 2 2355555543
No 224
>PRK10263 DNA translocase FtsK; Provisional
Probab=77.54 E-value=9.6 Score=53.48 Aligned_cols=13 Identities=15% Similarity=0.309 Sum_probs=5.5
Q ss_pred hHHHHHHHhhhcC
Q 000293 1601 IIISGLAFALSQR 1613 (1712)
Q Consensus 1601 iIISSLLFALlHl 1613 (1712)
++++++.|+.+|+
T Consensus 122 LLLas~gLaa~~~ 134 (1355)
T PRK10263 122 LILTSCGLAAINA 134 (1355)
T ss_pred HHHHHHHHHHhcc
Confidence 3334444444443
No 225
>PRK12438 hypothetical protein; Provisional
Probab=77.47 E-value=24 Score=48.66 Aligned_cols=14 Identities=14% Similarity=0.257 Sum_probs=8.6
Q ss_pred cchHHHHHHhHHhh
Q 000293 1638 SLSVPIGLRTGIMA 1651 (1712)
Q Consensus 1638 SLWlpIGLHagWn~ 1651 (1712)
++-.+.-.|.+...
T Consensus 204 ~~s~~ar~hL~vl~ 217 (991)
T PRK12438 204 MLTQAARVQLAVFA 217 (991)
T ss_pred cCCHHHHHHHHHHH
Confidence 46667777865443
No 226
>PLN02847 triacylglycerol lipase
Probab=77.15 E-value=3.8 Score=53.07 Aligned_cols=36 Identities=11% Similarity=-0.060 Sum_probs=27.1
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHH
Q 000293 274 DICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAE 309 (1712)
Q Consensus 274 DL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge 309 (1712)
++...|..+...||.-+++++||||||+++...+..
T Consensus 236 ~i~~~L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 236 LSTPCLLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 444455555667888899999999999998776544
No 227
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=76.89 E-value=18 Score=42.71 Aligned_cols=79 Identities=11% Similarity=0.061 Sum_probs=48.6
Q ss_pred HHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCc----HHHHHHHHHHHHhhCC----CCcEEEEEecHHHHHHH
Q 000293 233 RIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAAD----SDDICTAIQFIGKARP----WTTLMSVGWGYGANMLT 304 (1712)
Q Consensus 233 Yir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~----tdDL~aVLd~I~kryP----~spLvLVGhSMGG~IaL 304 (1712)
.++.+...|+++||.|++.=+.= .+-|... ...++.+++.+..+.. ..|++.||||||.-+-+
T Consensus 35 tYr~lLe~La~~Gy~ViAtPy~~---------tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhl 105 (250)
T PF07082_consen 35 TYRYLLERLADRGYAVIATPYVV---------TFDHQAIAREVWERFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHL 105 (250)
T ss_pred HHHHHHHHHHhCCcEEEEEecCC---------CCcHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCeeeeecccchHHHH
Confidence 56889999999999999876531 1112211 2345556666665432 24889999999997766
Q ss_pred HHHHHcCCCCCccEEEEe
Q 000293 305 KYLAEVGERTPLTAVTCI 322 (1712)
Q Consensus 305 ~YLge~ge~s~V~AaVlI 322 (1712)
.+...+.. .-++-++|
T Consensus 106 Li~s~~~~--~r~gnili 121 (250)
T PF07082_consen 106 LIGSLFDV--ERAGNILI 121 (250)
T ss_pred HHhhhccC--cccceEEE
Confidence 54444322 12444555
No 228
>PLN02571 triacylglycerol lipase
Probab=76.71 E-value=3.3 Score=51.85 Aligned_cols=37 Identities=14% Similarity=0.166 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHhhCCCC--cEEEEEecHHHHHHHHHHHH
Q 000293 273 DDICTAIQFIGKARPWT--TLMSVGWGYGANMLTKYLAE 309 (1712)
Q Consensus 273 dDL~aVLd~I~kryP~s--pLvLVGhSMGG~IaL~YLge 309 (1712)
+++...|..+..+|+.. ++++.||||||.+++..+..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45556666666677754 78999999999999887765
No 229
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=75.96 E-value=4.3 Score=50.40 Aligned_cols=83 Identities=10% Similarity=0.029 Sum_probs=43.4
Q ss_pred CCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCC-CCCCCcc--cCcHHHHHHHHHHHHhhCCCCcE
Q 000293 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPL-TTSRLFT--AADSDDICTAIQFIGKARPWTTL 291 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~l-tsprly~--a~~tdDL~aVLd~I~kryP~spL 291 (1712)
..-.||+.||+.+ ....|++..+...... +-=.++..||+=+... +-..... .+..+++.+.+... ...++
T Consensus 79 ~~HLvVlthGi~~-~~~~~~~~~~~~~~kk-~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~----si~kI 152 (405)
T KOG4372|consen 79 PKHLVVLTHGLHG-ADMEYWKEKIEQMTKK-MPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDY----SIEKI 152 (405)
T ss_pred CceEEEecccccc-ccHHHHHHHHHhhhcC-CCcceEeeeccccchhhccccceeeecccHHHHhhhhhcc----cccee
Confidence 4568999999976 3344565555555543 1111444455433321 2122222 22233333322222 13689
Q ss_pred EEEEecHHHHHH
Q 000293 292 MSVGWGYGANML 303 (1712)
Q Consensus 292 vLVGhSMGG~Ia 303 (1712)
-.||||+||.++
T Consensus 153 SfvghSLGGLva 164 (405)
T KOG4372|consen 153 SFVGHSLGGLVA 164 (405)
T ss_pred eeeeeecCCeee
Confidence 999999999764
No 230
>TIGR00765 yihY_not_rbn YihY family protein (not ribonuclease BN). Members of this subfamily include the largely uncharacterized BrkB (Bordetella resist killing by serum B) from Bordetella pertussis. Some members have an additional C-terminal domain. Paralogs from E. coli (yhjD) and Mycobactrium tuberculosis (Rv3335c) are part of a smaller, related subfamily that form their own cluster.
Probab=75.41 E-value=92 Score=36.66 Aligned_cols=59 Identities=12% Similarity=0.139 Sum_probs=35.2
Q ss_pred HHHHHHHhh-cccCcchhhhhHHHHHhhccccccchhHHHHHHHHh-hcCchhHHHHHHHHH
Q 000293 1379 RLVAMLADL-GQKGGLLKLVGKLALLWGGLRGAMSLTEKLILFLHL-ADRPLLQRILGFVGM 1438 (1712)
Q Consensus 1379 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~slt~~~~~~~~~-~~~P~~~rIilFllm 1438 (1712)
-+..++.++ .|.|++ -.+|=+.+||++.++..++-+-+=.-... .+++.+.++..++.+
T Consensus 69 ~i~~~i~~~~~~~~~~-~~ig~~~~lwsas~~~~~l~~~ln~i~~~~~~r~~~~~~~~~~~~ 129 (259)
T TIGR00765 69 MIKDYIEQFVKNSNKL-TAVGIVSLIVTALLLINNIDSTLNKIWRVKPRRSAIFSFAIYWTI 129 (259)
T ss_pred HHHHHHHHHHHhCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHH
Confidence 333444443 455555 47899999999999988875443222223 346666665554433
No 231
>PF03699 UPF0182: Uncharacterised protein family (UPF0182); InterPro: IPR005372 This family contains uncharacterised integral membrane proteins.; GO: 0016021 integral to membrane
Probab=73.62 E-value=35 Score=46.27 Aligned_cols=12 Identities=8% Similarity=0.022 Sum_probs=7.0
Q ss_pred HHHHHHhHHhhh
Q 000293 1641 VPIGLRTGIMAS 1652 (1712)
Q Consensus 1641 lpIGLHagWn~~ 1652 (1712)
.+.-.|.+...+
T Consensus 197 ~~a~~hL~~L~~ 208 (774)
T PF03699_consen 197 RAARRHLSILLA 208 (774)
T ss_pred HHHHHHHHHHHH
Confidence 566667665543
No 232
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=73.53 E-value=4.7 Score=49.29 Aligned_cols=43 Identities=9% Similarity=0.142 Sum_probs=35.0
Q ss_pred cccCcHHHHHHHHHHHHhhCCCCcEEEEEecHHHHHHHHHHHH
Q 000293 267 FTAADSDDICTAIQFIGKARPWTTLMSVGWGYGANMLTKYLAE 309 (1712)
Q Consensus 267 y~a~~tdDL~aVLd~I~kryP~spLvLVGhSMGG~IaL~YLge 309 (1712)
|...+...+.+.++.+..+||.-.+++.||||||.+|...+..
T Consensus 149 ~~~~~~~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 149 YTSLWNSGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred hccccHHHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 3334457888888888899998999999999999998776654
No 233
>PRK10263 DNA translocase FtsK; Provisional
Probab=73.52 E-value=34 Score=48.47 Aligned_cols=19 Identities=16% Similarity=-0.011 Sum_probs=12.7
Q ss_pred cCCchhhHHHHHHHhhhcC
Q 000293 1595 LDYHRGIIISGLAFALSQR 1613 (1712)
Q Consensus 1595 ~g~~~AiIISSLLFALlHl 1613 (1712)
.|-+++.+++.++..+++.
T Consensus 142 gGGIIG~lLs~lL~~LfG~ 160 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHS 160 (1355)
T ss_pred ccchHHHHHHHHHHHHHhH
Confidence 4566677777777777765
No 234
>PRK12438 hypothetical protein; Provisional
Probab=72.38 E-value=87 Score=43.62 Aligned_cols=32 Identities=6% Similarity=0.118 Sum_probs=17.3
Q ss_pred hHHHHHHHHHHHHHHHHHHH--HHHHhhcccccC
Q 000293 1510 VQNFLKGLIAGVMLVLLIQS--LNAVLGCVSFSW 1541 (1712)
Q Consensus 1510 ~r~ll~GLllGvllillv~l--i~~llG~i~~~~ 1541 (1712)
+..++.++++.++++.+++. +-+++|.+.+..
T Consensus 167 f~~~l~~~l~~~~~~~~i~~~~~~yl~g~irl~~ 200 (991)
T PRK12438 167 FYRSVLNWLFVAVVLAFLASLLTHYLFGGLRLTT 200 (991)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 45556666665555444432 335667666543
No 235
>TIGR02916 PEP_his_kin putative PEP-CTERM system histidine kinase. Members of this protein family have a novel N-terminal domain, a single predicted membrane-spanning helix, and a predicted cystosolic histidine kinase domain. We designate this protein PrsK, and its companion DNA-binding response regulator protein (TIGR02915) PrsR. These predicted signal-transducing proteins appear to enable enhancer-dependent transcriptional activation. The prsK gene is often associated with exopolysaccharide biosynthesis genes.
Probab=71.48 E-value=1e+02 Score=41.17 Aligned_cols=26 Identities=31% Similarity=0.547 Sum_probs=16.4
Q ss_pred CcchhhhhHHHHHhhccccccchhHH
Q 000293 1391 GGLLKLVGKLALLWGGLRGAMSLTEK 1416 (1712)
Q Consensus 1391 ~~~~~~~~~~~~~~~~~~~~~slt~~ 1416 (1712)
|.+|-+.+=+..+|.+.-++|++..-
T Consensus 27 ~~~l~~a~~~~~~w~~~~~~~~~~~~ 52 (679)
T TIGR02916 27 GGLLLLAAALSAVWALASAALVYMDY 52 (679)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccccc
Confidence 34455555555789888777765533
No 236
>PLN02324 triacylglycerol lipase
Probab=69.86 E-value=6 Score=49.61 Aligned_cols=37 Identities=14% Similarity=0.116 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHhhCCCC--cEEEEEecHHHHHHHHHHHH
Q 000293 273 DDICTAIQFIGKARPWT--TLMSVGWGYGANMLTKYLAE 309 (1712)
Q Consensus 273 dDL~aVLd~I~kryP~s--pLvLVGhSMGG~IaL~YLge 309 (1712)
+.+.+.|..+..+||.. .|++.||||||.+++..+..
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 44556666677778853 69999999999999877754
No 237
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=69.41 E-value=64 Score=41.55 Aligned_cols=24 Identities=17% Similarity=0.166 Sum_probs=13.2
Q ss_pred hHHHHHHHHHHHHhhhccCccchh
Q 000293 1683 GVVGLAFSLILAIILYPRQPLLSK 1706 (1712)
Q Consensus 1683 Gv~glv~l~l~a~il~~~~~l~~k 1706 (1712)
|++.++++++++++++.+-+.++.
T Consensus 449 g~~~l~~lf~~gl~ll~~v~~~~g 472 (477)
T PF11700_consen 449 GFLFLLVLFLIGLILLFFVDVEKG 472 (477)
T ss_pred HHHHHHHHHHHHHHHHhhccchhh
Confidence 566666666665555544444433
No 238
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=69.02 E-value=1.6e+02 Score=39.27 Aligned_cols=44 Identities=14% Similarity=0.181 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHH--HHhhHHHHHhhcCCchhhHHHHHHHhhh
Q 000293 1568 GIVTATVVVLVEELLF--RSWLPEEIAADLDYHRGIIISGLAFALS 1611 (1712)
Q Consensus 1568 ~llvallvgi~EELLF--RG~L~~~L~~~~g~~~AiIISSLLFALl 1611 (1712)
++++.++-++.|=... ++++..+|.++...+.+.++-+.+++..
T Consensus 280 G~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~ 325 (599)
T PF06609_consen 280 GFVLLVAFVVWEWFGAPKDPLFPHRLFKDRRGFAALLVISFISGMN 325 (599)
T ss_pred HHHHHHHHHHhhhhccCCCCcCCHHHhccchHHHHHHHHHHHHHHH
Confidence 3333333367765554 4677777877644445544444444433
No 239
>PLN02719 triacylglycerol lipase
Probab=68.45 E-value=6.6 Score=50.33 Aligned_cols=37 Identities=8% Similarity=0.109 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHhhCCC-----CcEEEEEecHHHHHHHHHHHH
Q 000293 273 DDICTAIQFIGKARPW-----TTLMSVGWGYGANMLTKYLAE 309 (1712)
Q Consensus 273 dDL~aVLd~I~kryP~-----spLvLVGhSMGG~IaL~YLge 309 (1712)
+++.+.|..+..+||. ..|.+.||||||.+++..+..
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 5566667777777874 379999999999999887754
No 240
>PLN03037 lipase class 3 family protein; Provisional
Probab=68.39 E-value=7.1 Score=50.10 Aligned_cols=35 Identities=11% Similarity=0.064 Sum_probs=24.0
Q ss_pred HHHHHHHHHhhCC----CCcEEEEEecHHHHHHHHHHHH
Q 000293 275 ICTAIQFIGKARP----WTTLMSVGWGYGANMLTKYLAE 309 (1712)
Q Consensus 275 L~aVLd~I~kryP----~spLvLVGhSMGG~IaL~YLge 309 (1712)
+.+.|..+.+.|+ ..+|++.||||||.+++..+..
T Consensus 300 Vl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 300 VMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 3334444444443 3479999999999999877754
No 241
>PLN02802 triacylglycerol lipase
Probab=67.23 E-value=7.3 Score=49.88 Aligned_cols=38 Identities=11% Similarity=0.167 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHhhCCCC--cEEEEEecHHHHHHHHHHHHc
Q 000293 273 DDICTAIQFIGKARPWT--TLMSVGWGYGANMLTKYLAEV 310 (1712)
Q Consensus 273 dDL~aVLd~I~kryP~s--pLvLVGhSMGG~IaL~YLge~ 310 (1712)
+++...|..+..+|+.. .|++.||||||.+++..+...
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 35555666666677643 689999999999998776553
No 242
>PLN02310 triacylglycerol lipase
Probab=67.00 E-value=6.5 Score=49.23 Aligned_cols=36 Identities=11% Similarity=0.089 Sum_probs=24.9
Q ss_pred HHHHHHHHHHhhCC----CCcEEEEEecHHHHHHHHHHHH
Q 000293 274 DICTAIQFIGKARP----WTTLMSVGWGYGANMLTKYLAE 309 (1712)
Q Consensus 274 DL~aVLd~I~kryP----~spLvLVGhSMGG~IaL~YLge 309 (1712)
.+.+.|..+...|+ ..+|.+.||||||.+++..+..
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 34444455544443 4589999999999999876654
No 243
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=65.73 E-value=9.4 Score=46.00 Aligned_cols=106 Identities=14% Similarity=0.062 Sum_probs=59.4
Q ss_pred CCCcEEEEeCCCCCCChhH-HHHHHHHHHHhCC----cEEEEEcCCCCCCCCCCCCCCccc-CcHHHHH-HHHHHHHhhC
Q 000293 214 GLDTTLLLVPGTAEGSIEK-RIRLFVCEALRRG----FFPVVMNPRGCGGSPLTTSRLFTA-ADSDDIC-TAIQFIGKAR 286 (1712)
Q Consensus 214 ~~~PtVVLLHGltGGS~~s-Yir~La~~Llq~G----YrVVVfD~RGhGgS~ltsprly~a-~~tdDL~-aVLd~I~kry 286 (1712)
...|++++.||-- .... -+...+..|...| --+|.+|+- ........+++. +..+.+. +++-++..+|
T Consensus 96 ~k~pvl~~~DG~~--~~~~g~i~~~~dsli~~g~i~pai~vgid~~---d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~y 170 (299)
T COG2382 96 EKYPVLYLQDGQD--WFRSGRIPRILDSLIAAGEIPPAILVGIDYI---DVKKRREELHCNEAYWRFLAQELLPYVEERY 170 (299)
T ss_pred ccccEEEEeccHH--HHhcCChHHHHHHHHHcCCCCCceEEecCCC---CHHHHHHHhcccHHHHHHHHHHhhhhhhccC
Confidence 3578999999841 1111 1334455555544 234444432 211111222222 2233443 4667888888
Q ss_pred CCC----cEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCC
Q 000293 287 PWT----TLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPF 326 (1712)
Q Consensus 287 P~s----pLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~ 326 (1712)
|.. .-+++|-||||.+++..+..+++ .+..++.-|+.+
T Consensus 171 p~~~~a~~r~L~G~SlGG~vsL~agl~~Pe--~FG~V~s~Sps~ 212 (299)
T COG2382 171 PTSADADGRVLAGDSLGGLVSLYAGLRHPE--RFGHVLSQSGSF 212 (299)
T ss_pred cccccCCCcEEeccccccHHHHHHHhcCch--hhceeeccCCcc
Confidence 743 45899999999999988888876 454444444433
No 244
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=65.48 E-value=91 Score=37.85 Aligned_cols=254 Identities=13% Similarity=0.144 Sum_probs=120.5
Q ss_pred CcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEEEE
Q 000293 216 DTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVG 295 (1712)
Q Consensus 216 ~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spLvLVG 295 (1712)
+|.|+++--+. |......|..++.++.. ..|++-||-..---++..+.+-...+.+-+.++|.++ .|...++.|.
T Consensus 103 dPkvLivapms-GH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~---Gp~~hv~aVC 177 (415)
T COG4553 103 DPKVLIVAPMS-GHYATLLRGTVEALLPY-HDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFL---GPDAHVMAVC 177 (415)
T ss_pred CCeEEEEeccc-ccHHHHHHHHHHHhccc-cceeEeeccccceeecccCCccHHHHHHHHHHHHHHh---CCCCcEEEEe
Confidence 56777777764 45555677777776553 5688888876544444433331112222233333333 3444444443
Q ss_pred ecHH-HHHHHHHHHHcCCCCCccEEEEecCCCChhhhh---------cc-------------Cch----hhHh------H
Q 000293 296 WGYG-ANMLTKYLAEVGERTPLTAVTCIDNPFDLEEAT---------RS-------------SPH----HIAL------D 342 (1712)
Q Consensus 296 hSMG-G~IaL~YLge~ge~s~V~AaVlIS~P~Dl~e~~---------~s-------------l~~----~~ly------~ 342 (1712)
.--= -..+..+.++.+++..-....+++.|.|..... +. +++ +++| .
T Consensus 178 QP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR~nPTavN~lA~~k~~~WF~~n~vm~vP~~ypg~gR~VYPGFlQla 257 (415)
T COG4553 178 QPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDARKNPTAVNELATEKSIEWFRDNVVMQVPPPYPGFGRRVYPGFLQLA 257 (415)
T ss_pred cCCchHHHHHHHHHhcCCCCCCceeeeecCccccccCcHHHhHhhhccchHHHHhCeeeecCCCCCCccccccccHHHhh
Confidence 2211 111222334444443345566778887764210 00 010 1122 1
Q ss_pred HHHHHHHHHHHHhhhhhhhccCCCCCHHHHhhhccHHHH-HHHHhhh----ccchhcHHHHHhhcCcc-----h-----h
Q 000293 343 EKLANGLIDILRSNKELFKGRAKGFDVEKALSAKSVRDF-EKAISMV----SYGFEAIEDFYSKSSTR-----S-----V 407 (1712)
Q Consensus 343 ~~La~~Lk~~L~~~~~lf~~~~~~~Die~IlkaktlrEF-Dd~~t~~----~~Gf~sv~eYYr~aS~~-----~-----~ 407 (1712)
..+..++.+-+..|...|.... .-|.+.+. ..++| |+++... -|-..++++-|.+.... . +
T Consensus 258 gFmsmNldrH~~aH~~~~~~Lv-~~D~~~Ae---~h~~FYdEYlavmdl~aEfYLqTid~VFqq~~LpkG~~vhrg~~vd 333 (415)
T COG4553 258 GFMSMNLDRHIDAHKDFFLSLV-KNDGDSAE---KHREFYDEYLAVMDLTAEFYLQTIDEVFQQHALPKGEMVHRGKPVD 333 (415)
T ss_pred hHhhcChhhhHHHHHHHHHHHH-cccchhHH---HHHHHHHHHHHHccchHHHHHHHHHHHHHHhcccCCceeecCCcCC
Confidence 2333455555666665554311 11222222 23333 4433211 01112333333332211 0 1
Q ss_pred cCcC-CccEEEEEe-CCCCCCCCC--hHHHHHhcCCCe--EEEEecCCCccccCCCCchhHHHHHHHHHHHHHHHhh
Q 000293 408 VGNI-KIPVLFIQN-DAGAVPPFS--IPRSSIAENPFT--SLLLCSCLPSSVIGGGRAAESWCQNLVIEWLSAVELG 478 (1712)
Q Consensus 408 L~kI-kVPtLII~G-DDp~VP~~a--ip~~la~~nPnv--~LvLt~gGHH~gF~e~~~~~sWv~r~VlEFL~av~~~ 478 (1712)
...| ++-++-|-| .|++.-... ....++..+|.. ...+-++.||-+...+..-+..+.-.+.+|+.+++..
T Consensus 334 p~~I~~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGsrfr~eIvPri~dFI~~~d~~ 410 (415)
T COG4553 334 PTAITNVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGSRFREEIVPRIRDFIRRYDRS 410 (415)
T ss_pred hhheeceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccceeccchHHHHHHHHHHHHHHHhCcc
Confidence 1223 366788889 888865422 233455556642 2334455555555444445556778899999887754
No 245
>PRK07668 hypothetical protein; Validated
Probab=65.42 E-value=2.1e+02 Score=34.34 Aligned_cols=28 Identities=18% Similarity=0.123 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 000293 1511 QNFLKGLIAGVMLVLLIQSLNAVLGCVS 1538 (1712)
Q Consensus 1511 r~ll~GLllGvllillv~li~~llG~i~ 1538 (1712)
+.+...++.+++.+++.+++.++..+..
T Consensus 140 ~~~i~~~~~~~~p~~l~i~i~~l~k~yp 167 (254)
T PRK07668 140 KWFLIIYLVILIPMLLIVAIMFLNKWYG 167 (254)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 3344444566666666667777766644
No 246
>COG4232 Thiol:disulfide interchange protein [Posttranslational modification, protein turnover, chaperones / Energy production and conversion]
Probab=65.35 E-value=1.1e+02 Score=40.13 Aligned_cols=21 Identities=38% Similarity=0.985 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhh
Q 000293 1432 ILGFVGMVLVLWSPVLVPLLP 1452 (1712)
Q Consensus 1432 IilFllmllllwlP~aI~l~p 1452 (1712)
+..|++-+++-+.|.+++.+|
T Consensus 171 l~afl~GLlL~ftPCVLPmlp 191 (569)
T COG4232 171 LLAFLGGLLLNFTPCVLPMLP 191 (569)
T ss_pred HHHHHHHHHHhhccHhhhhHH
Confidence 455666777888999998887
No 247
>PLN02761 lipase class 3 family protein
Probab=65.29 E-value=8.3 Score=49.56 Aligned_cols=37 Identities=8% Similarity=0.112 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHhhCC------CCcEEEEEecHHHHHHHHHHHH
Q 000293 273 DDICTAIQFIGKARP------WTTLMSVGWGYGANMLTKYLAE 309 (1712)
Q Consensus 273 dDL~aVLd~I~kryP------~spLvLVGhSMGG~IaL~YLge 309 (1712)
+++...|..+...|| ..+|++.||||||.+++..+..
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 456666666766673 3479999999999999876644
No 248
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=64.47 E-value=2.2 Score=50.26 Aligned_cols=14 Identities=21% Similarity=0.093 Sum_probs=0.0
Q ss_pred CchhHHHHHHHHHH
Q 000293 1426 RPLLQRILGFVGMV 1439 (1712)
Q Consensus 1426 ~P~~~rIilFllml 1439 (1712)
.|-+-..++|-.++
T Consensus 18 ~p~~~a~l~~~~ll 31 (381)
T PF05297_consen 18 CPQPHASLLFGLLL 31 (381)
T ss_dssp --------------
T ss_pred CCCcchhHHHHHHH
Confidence 34444444444333
No 249
>COG4377 Predicted membrane protein [Function unknown]
Probab=64.41 E-value=59 Score=37.31 Aligned_cols=39 Identities=15% Similarity=0.044 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHhhHHHHHhhcCCchhhHHHHHHHhhhcCCc
Q 000293 1572 ATVVVLVEELLFRSWLPEEIAADLDYHRGIIISGLAFALSQRSP 1615 (1712)
Q Consensus 1572 allvgi~EELLFRG~L~~~L~~~~g~~~AiIISSLLFALlHltl 1615 (1712)
.+.+++.||-- |=..++.|.+|-+-| ..++.||+-|.++
T Consensus 84 ~lMAg~FEE~g-R~l~~rfl~kR~~~~----Ad~lAyglGHgGl 122 (258)
T COG4377 84 LLMAGFFEETG-RLLFFRFLEKRSLEK----ADALAYGLGHGGL 122 (258)
T ss_pred HHHHHHHHHHh-HHHHHHHHHhCcccc----hhHHHHhcccccH
Confidence 44579999953 666667777765554 4678899999854
No 250
>PLN02753 triacylglycerol lipase
Probab=64.28 E-value=8.9 Score=49.31 Aligned_cols=37 Identities=11% Similarity=0.139 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHhhCC-----CCcEEEEEecHHHHHHHHHHHH
Q 000293 273 DDICTAIQFIGKARP-----WTTLMSVGWGYGANMLTKYLAE 309 (1712)
Q Consensus 273 dDL~aVLd~I~kryP-----~spLvLVGhSMGG~IaL~YLge 309 (1712)
+.+.+.|..+..+|+ ..+|++.||||||.+++..+..
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 455566666666665 3589999999999999877644
No 251
>TIGR03109 exosortase_1 exosortase 1. The predicted protein-sorting transpeptidase that we call exosortase (see TIGR02602) has distinct subclasses that associated with different types of exopolysaccharide production loci. We designate this, the most common type so far, exosortase 1. We propose the gene symbol xrtA, analogous to srtA for the most common type of sortase in Gram-positive bacteria.
Probab=64.04 E-value=1.5e+02 Score=35.56 Aligned_cols=20 Identities=10% Similarity=-0.046 Sum_probs=15.8
Q ss_pred cchHHHHHHHHHHHHHHHHh
Q 000293 1615 PQAIPGLWLLSLALAGVRQR 1634 (1712)
Q Consensus 1615 l~~~i~lfLlGLvLa~ay~r 1634 (1712)
+.++..++.+|+++++.+.+
T Consensus 180 lr~l~~~~~l~~l~~~l~~~ 199 (267)
T TIGR03109 180 LRYLIASLAIGALYAYLNFR 199 (267)
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 35678888899999988765
No 252
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=63.45 E-value=1.7e+02 Score=38.29 Aligned_cols=161 Identities=13% Similarity=0.122 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHHHHH----HhheeecccCCcccccccccC--chhhHHHHHHHHHHHHHHHHHHHHHHHhhcccccC
Q 000293 1468 EFACIVGLYIAVMILTMK----WGRRVRGYENSLEQYGLDITS--LPKVQNFLKGLIAGVMLVLLIQSLNAVLGCVSFSW 1541 (1712)
Q Consensus 1468 ~l~~lv~Lyla~lILlil----W~~~~~~~r~pls~lGL~~~~--~~~~r~ll~GLllGvllillv~li~~llG~i~~~~ 1541 (1712)
.+..++.++..+-+++.+ ...++.....|.+.-+..+.- .++......|+++|.++-++++.+++.+-.-+
T Consensus 434 T~~~ll~LwF~isVPLsf~G~y~g~kk~~~e~PvrTNqIpRqIP~q~~y~~~~~~ili~GilPFg~ifIELfFI~~S--- 510 (628)
T KOG1278|consen 434 TMVALLFLWFGISVPLSFVGGYFGFKKPAIEHPVRTNQIPRQIPEQPWYLNPIPSILIAGILPFGAIFIELFFILSS--- 510 (628)
T ss_pred HHHHHHHHHHHhhhhHHHhhHHhhccCCCCCCCcccCCCcccCCCCccccchhhHHHhhcccchHHHHHHHHHHHHH---
Confidence 344455555555444333 233444445555555544222 12344446677777666666666665432211
Q ss_pred CccccchhhHHHHHHHhhhhH-HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCchhhHHH---HHHHhhhcC----
Q 000293 1542 PSIVTSSLTAMAWLKVYGNIS-MLACQGIVTATVVVLVEELLFRSWLPEEIAADLDYHRGIIIS---GLAFALSQR---- 1613 (1712)
Q Consensus 1542 ~~~~~sa~~p~~~l~~~~~~~-~lil~~llvallvgi~EELLFRG~L~~~L~~~~g~~~AiIIS---SLLFALlHl---- 1613 (1712)
.|+. ++. ++-+..++..+++-.+=|+=.=+--++...+++.+||--.+. +.++-++|.
T Consensus 511 -----------iW~~---qfYY~FGFLFlvfiiLvvtcaeisIvl~Yf~LC~Edy~WwWRsF~~sG~~avY~fiYsi~Y~ 576 (628)
T KOG1278|consen 511 -----------IWLN---QFYYMFGFLFLVFIILVVTCAEISIVLTYFQLCAEDYNWWWRSFLTSGSSAVYVFIYSIFYF 576 (628)
T ss_pred -----------HHhh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceeeeeeeccCcchhhHHHHHHhhh
Confidence 1100 011 111112233344556667777777788899999987643333 233333332
Q ss_pred -------CcchHHHHHHHHHHHHHHHHhcCCcchHHHHHHhHH
Q 000293 1614 -------SPQAIPGLWLLSLALAGVRQRSQGSLSVPIGLRTGI 1649 (1712)
Q Consensus 1614 -------tl~~~i~lfLlGLvLa~ay~rttGSLWlpIGLHagW 1649 (1712)
.+.+.+.+|.-.+++.++...-|| +||+-++.
T Consensus 577 ~~kL~i~g~~s~~LYfgYsli~~~~~~l~tG----tIGF~a~~ 615 (628)
T KOG1278|consen 577 FTKLEISGFVSAVLYFGYSLIISLLFFLLTG----TIGFLAAF 615 (628)
T ss_pred heeeeecccchhHHHHHHHHHHHHHHHHHhc----cHHHHHHH
Confidence 123334444444455555444466 45555443
No 253
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=62.02 E-value=71 Score=35.79 Aligned_cols=75 Identities=16% Similarity=0.290 Sum_probs=46.9
Q ss_pred cEEEEeCCCCCCChhHHHHHHHHHHHhCCcE-EEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCCCCcEEEEE
Q 000293 217 TTLLLVPGTAEGSIEKRIRLFVCEALRRGFF-PVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARPWTTLMSVG 295 (1712)
Q Consensus 217 PtVVLLHGltGGS~~sYir~La~~Llq~GYr-VVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP~spLvLVG 295 (1712)
..||..-|| |+..+.+.++. ...++. ++++|++...-. + |+.+ | ..+.+|.
T Consensus 12 ~LIvyFaGw--gtpps~v~HLi---lpeN~dl~lcYDY~dl~ld-------f------DfsA--------y--~hirlvA 63 (214)
T COG2830 12 HLIVYFAGW--GTPPSAVNHLI---LPENHDLLLCYDYQDLNLD-------F------DFSA--------Y--RHIRLVA 63 (214)
T ss_pred EEEEEEecC--CCCHHHHhhcc---CCCCCcEEEEeehhhcCcc-------c------chhh--------h--hhhhhhh
Confidence 478888886 45555555554 334454 778888765321 0 2211 1 3467899
Q ss_pred ecHHHHHHHHHHHHcCCCCCccEEEEec
Q 000293 296 WGYGANMLTKYLAEVGERTPLTAVTCID 323 (1712)
Q Consensus 296 hSMGG~IaL~YLge~ge~s~V~AaVlIS 323 (1712)
||||-.++-+.+-.. +++.+++|.
T Consensus 64 wSMGVwvAeR~lqg~----~lksatAiN 87 (214)
T COG2830 64 WSMGVWVAERVLQGI----RLKSATAIN 87 (214)
T ss_pred hhHHHHHHHHHHhhc----cccceeeec
Confidence 999999988887554 466666664
No 254
>COG1480 Predicted membrane-associated HD superfamily hydrolase [General function prediction only]
Probab=61.20 E-value=3.2e+02 Score=36.84 Aligned_cols=17 Identities=35% Similarity=0.483 Sum_probs=12.1
Q ss_pred HHHHhhhcccCCccccC
Q 000293 1354 SLAEKAMSVASPVVPTK 1370 (1712)
Q Consensus 1354 ~~~~~~~~~~~~~~~~~ 1370 (1712)
.++++|.+.-=||.=++
T Consensus 227 ~~~~ea~~~v~~V~I~~ 243 (700)
T COG1480 227 NLRQEALSKVEPVKISK 243 (700)
T ss_pred HHHHHHHhccCceEEec
Confidence 35677777777887766
No 255
>PRK10929 putative mechanosensitive channel protein; Provisional
Probab=61.01 E-value=1.1e+02 Score=43.26 Aligned_cols=19 Identities=21% Similarity=0.447 Sum_probs=11.9
Q ss_pred hhHHHHHHHHHHHHHhhHh
Q 000293 1148 MESDLARDLERVATDISLA 1166 (1712)
Q Consensus 1148 ~~~~~~~~~~~~~~~~~~~ 1166 (1712)
.-.+|+..+.+.+..+...
T Consensus 266 ~N~~Ls~~L~~~t~~~n~l 284 (1109)
T PRK10929 266 INRELSQALNQQAQRMDLI 284 (1109)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3556677777776665553
No 256
>PRK01637 hypothetical protein; Reviewed
Probab=60.82 E-value=3.6e+02 Score=32.37 Aligned_cols=37 Identities=19% Similarity=0.147 Sum_probs=23.5
Q ss_pred hhhHHHHHhhccccccchhHHHHHHHH-hh-cCchhHHHH
Q 000293 1396 LVGKLALLWGGLRGAMSLTEKLILFLH-LA-DRPLLQRIL 1433 (1712)
Q Consensus 1396 ~~~~~~~~~~~~~~~~slt~~~~~~~~-~~-~~P~~~rIi 1433 (1712)
++|=+.++|+++++..++-.- +|... .. +++.+.++.
T Consensus 95 ~~g~~~ll~sa~~~~~~l~~a-~N~i~~~~~~R~~~~~~~ 133 (286)
T PRK01637 95 AVGICGLIVVALMLISSIDKA-LNTIWRSKRKRPKVYSFA 133 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHhCCCCCCcHHHHHH
Confidence 478888999999987766443 34333 33 356666554
No 257
>PRK05771 V-type ATP synthase subunit I; Validated
Probab=58.57 E-value=1.6e+02 Score=39.33 Aligned_cols=44 Identities=30% Similarity=0.359 Sum_probs=30.8
Q ss_pred cchhhHHHHHhhhcccCCccccCCCCcchHHHHHH---------HHHhhcccCcchhhh
Q 000293 1348 QDNIVTSLAEKAMSVASPVVPTKEDGEVDQERLVA---------MLADLGQKGGLLKLV 1397 (1712)
Q Consensus 1348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~ 1397 (1712)
.||=.+.--|-=+..=|. -.=+|+|.--++| |++|.|| |++=+.
T Consensus 321 ~N~~~~~pFE~lv~mYg~----P~Y~EiDPT~~~ai~f~lfFGmM~gD~Gy--GLil~l 373 (646)
T PRK05771 321 KNPKFIKPFESLTEMYSL----PKYNEIDPTPFLAIFFPLFFGMMLGDAGY--GLLLLL 373 (646)
T ss_pred eCCchhhhHHHHHHHcCC----CCCCCcCCccHHHHHHHHHHHHHHHhHHH--HHHHHH
Confidence 555555555555555443 4568999999998 7999999 666555
No 258
>PRK09928 choline transport protein BetT; Provisional
Probab=57.34 E-value=38 Score=45.28 Aligned_cols=45 Identities=13% Similarity=0.060 Sum_probs=35.6
Q ss_pred hhhHHHHHHHhhhcCCcchHHHHHHHHHHHHHHHHhcCCcchHHH
Q 000293 1599 RGIIISGLAFALSQRSPQAIPGLWLLSLALAGVRQRSQGSLSVPI 1643 (1712)
Q Consensus 1599 ~AiIISSLLFALlHltl~~~i~lfLlGLvLa~ay~rttGSLWlpI 1643 (1712)
....-.|+.++++|+++..+..+.++|+.+||..+|..-.+-+.-
T Consensus 134 ~eAa~~Am~~t~FHWG~~aWAiYalvglalAYf~yr~~~pl~iss 178 (679)
T PRK09928 134 IEAARQAMVWTLFHYGLTGWSMYALMGMALGYFSYRYNLPLTIRS 178 (679)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhcCCCCCchhH
Confidence 345668999999999999999999999999999887443333333
No 259
>PRK11281 hypothetical protein; Provisional
Probab=56.72 E-value=3.1e+02 Score=39.26 Aligned_cols=19 Identities=11% Similarity=0.260 Sum_probs=11.1
Q ss_pred hhHHHHHHHHHHHHHhhHh
Q 000293 1148 MESDLARDLERVATDISLA 1166 (1712)
Q Consensus 1148 ~~~~~~~~~~~~~~~~~~~ 1166 (1712)
.-.+|++.+.+.+..+...
T Consensus 286 ~N~~Ls~~L~~~t~~~~~l 304 (1113)
T PRK11281 286 INLQLSQRLLKATEKLNTL 304 (1113)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3456666666666655443
No 260
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=56.56 E-value=1.2e+02 Score=37.77 Aligned_cols=107 Identities=9% Similarity=0.041 Sum_probs=63.5
Q ss_pred EEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhhCC--CCcEEEEE
Q 000293 218 TLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKARP--WTTLMSVG 295 (1712)
Q Consensus 218 tVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kryP--~spLvLVG 295 (1712)
+||++=||+ |..+.++..++....+.||.++.+-.+=+--....+.+.. ...+....+..+...+. ..|++.--
T Consensus 40 ~Iv~~~gWa-g~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~---sl~~~~~~l~~L~~~~~~~~~pi~fh~ 115 (350)
T KOG2521|consen 40 PIVVLLGWA-GAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRIL---SLSLASTRLSELLSDYNSDPCPIIFHV 115 (350)
T ss_pred cEEEEeeec-cccchhHHHHHHHHhcCCceEEEecCcccccccccccccc---hhhHHHHHHHHHhhhccCCcCceEEEE
Confidence 444444664 5677788888888899999999887775543322111111 12344445555544443 45888889
Q ss_pred ecHHHHHHHHHH-HH--cC--CCC-CccEEEEecCCCCh
Q 000293 296 WGYGANMLTKYL-AE--VG--ERT-PLTAVTCIDNPFDL 328 (1712)
Q Consensus 296 hSMGG~IaL~YL-ge--~g--e~s-~V~AaVlIS~P~Dl 328 (1712)
|||||..++... .+ .. ... ...+.++.++|...
T Consensus 116 FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~ 154 (350)
T KOG2521|consen 116 FSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARS 154 (350)
T ss_pred ecCCceeehHHHHHHHhhcCchhHhhcCCceEecccccc
Confidence 999998877655 22 11 111 24446666666654
No 261
>PF03699 UPF0182: Uncharacterised protein family (UPF0182); InterPro: IPR005372 This family contains uncharacterised integral membrane proteins.; GO: 0016021 integral to membrane
Probab=56.14 E-value=2.6e+02 Score=38.42 Aligned_cols=15 Identities=7% Similarity=0.157 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHhhee
Q 000293 1476 YIAVMILTMKWGRRV 1490 (1712)
Q Consensus 1476 yla~lILlilW~~~~ 1490 (1712)
+.++++.+-+|..++
T Consensus 59 ~~~~~~~~~~~~a~r 73 (774)
T PF03699_consen 59 LFFLFVFLNLWLAYR 73 (774)
T ss_pred HHHHHHHHHHHHHHh
Confidence 333344455566543
No 262
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=55.84 E-value=28 Score=42.30 Aligned_cols=79 Identities=20% Similarity=0.212 Sum_probs=50.7
Q ss_pred EEEEEcCC-CCCCCCCCCCCCccc--CcHHHHHHHHHHHHhhCC---CCcEEEEEecHHHHHHHHHHHHc--C------C
Q 000293 247 FPVVMNPR-GCGGSPLTTSRLFTA--ADSDDICTAIQFIGKARP---WTTLMSVGWGYGANMLTKYLAEV--G------E 312 (1712)
Q Consensus 247 rVVVfD~R-GhGgS~ltsprly~a--~~tdDL~aVLd~I~kryP---~spLvLVGhSMGG~IaL~YLge~--g------e 312 (1712)
.++-+|.| |.|-|-...+..+.. ...+|+..+|..+-+++| ..++++.|.|+||..+-.++.+- . .
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~ 82 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 82 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCC
Confidence 57888988 888885433322221 223788888877667776 46999999999998765544431 1 1
Q ss_pred CCCccEEEEecCCC
Q 000293 313 RTPLTAVTCIDNPF 326 (1712)
Q Consensus 313 ~s~V~AaVlIS~P~ 326 (1712)
..+++|+ +|+++|
T Consensus 83 ~inLkGi-~IGNg~ 95 (319)
T PLN02213 83 PINLQGY-MLGNPV 95 (319)
T ss_pred ceeeeEE-EeCCCC
Confidence 1356654 556665
No 263
>PRK03612 spermidine synthase; Provisional
Probab=53.11 E-value=4.7e+02 Score=34.30 Aligned_cols=48 Identities=23% Similarity=0.284 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh---HHHHHhhcCC-chhhHHHHHHHhhhcC
Q 000293 1566 CQGIVTATVVVLVEELLFRSWL---PEEIAADLDY-HRGIIISGLAFALSQR 1613 (1712)
Q Consensus 1566 l~~llvallvgi~EELLFRG~L---~~~L~~~~g~-~~AiIISSLLFALlHl 1613 (1712)
+++++++...|+.--++-|..- -+.+.+-+.. ..+.++.+++++++=+
T Consensus 119 ~~~~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 119 LIGLLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 4456666666776665544221 1223333332 3577778888777654
No 264
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=52.70 E-value=36 Score=43.75 Aligned_cols=97 Identities=14% Similarity=0.194 Sum_probs=57.0
Q ss_pred CCCcEEEEeCCCCCCChhHH-HHHHHHHHHhCC---------------cEEEEEc-CCCCCCCCC--CCCCCcccCcHHH
Q 000293 214 GLDTTLLLVPGTAEGSIEKR-IRLFVCEALRRG---------------FFPVVMN-PRGCGGSPL--TTSRLFTAADSDD 274 (1712)
Q Consensus 214 ~~~PtVVLLHGltGGS~~sY-ir~La~~Llq~G---------------YrVVVfD-~RGhGgS~l--tsprly~a~~tdD 274 (1712)
..+|.++.+-|++|.|...- +-.+.+.-...| =.+|.+| .-|.|-|.. .....-..+.-.|
T Consensus 99 ~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D 178 (498)
T COG2939 99 ANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGKD 178 (498)
T ss_pred CCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccchh
Confidence 35799999999887443211 111111111112 1366777 557776642 1111111223478
Q ss_pred HHHHHHHHHhhCC-----CCcEEEEEecHHHHHHHHHHHHc
Q 000293 275 ICTAIQFIGKARP-----WTTLMSVGWGYGANMLTKYLAEV 310 (1712)
Q Consensus 275 L~aVLd~I~kryP-----~spLvLVGhSMGG~IaL~YLge~ 310 (1712)
+..+.+.+.+.+| .++.+++|.|+||.-+-.+|.+-
T Consensus 179 ~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L 219 (498)
T COG2939 179 VYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHEL 219 (498)
T ss_pred HHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHH
Confidence 8888888776654 24899999999998877777653
No 265
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=51.67 E-value=26 Score=43.27 Aligned_cols=43 Identities=23% Similarity=0.302 Sum_probs=32.4
Q ss_pred CCCcEEEEEecHHHHHHHHHHHHcCCC---CCccEEEEecCCCChh
Q 000293 287 PWTTLMSVGWGYGANMLTKYLAEVGER---TPLTAVTCIDNPFDLE 329 (1712)
Q Consensus 287 P~spLvLVGhSMGG~IaL~YLge~ge~---s~V~AaVlIS~P~Dl~ 329 (1712)
+.+|+.+||||||+-+....+.+-.++ ..|.-+++++.|....
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 567999999999999987766553332 3478888998887553
No 266
>TIGR02921 PEP_integral PEP-CTERM family integral membrane protein. Members of this protein family, found in three different species so far, have a PEP-CTERM sequence at the carboxyl-terminus (see model TIGR02595), but are unusual among PEP-CTERM proteins in having multiple predicted transmembrane segments. The function is unknown. It is proposed that a member of the EpsH family, to be designated exosortase (see TIGR02602), recognizes and cleaves PEP-CTERM proteins in a manner analogous to the cleavage of LPXTG proteins by sortase (see Haft, et al., 2006).
Probab=50.95 E-value=1.7e+02 Score=38.34 Aligned_cols=20 Identities=20% Similarity=0.298 Sum_probs=13.1
Q ss_pred CCcchHHHHHHhHHhhhhhe
Q 000293 1636 QGSLSVPIGLRTGIMASSFV 1655 (1712)
Q Consensus 1636 tGSLWlpIGLHagWn~~~~~ 1655 (1712)
-|-||--|.+|.+.+.+.|+
T Consensus 182 ~~~i~nyil~~~a~i~glfi 201 (952)
T TIGR02921 182 LGDIFNYILFHTAFICGLFI 201 (952)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45677778888776655443
No 267
>PRK10921 twin-arginine protein translocation system subunit TatC; Provisional
Probab=50.43 E-value=5.2e+02 Score=31.00 Aligned_cols=68 Identities=9% Similarity=0.008 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHH-HhhHHHHHhhcCCchhhHHHHHHHhhhcCCcchHHHHHHHHHHHHHHHHhcCCcchHH
Q 000293 1569 IVTATVVVLVEELLFR-SWLPEEIAADLDYHRGIIISGLAFALSQRSPQAIPGLWLLSLALAGVRQRSQGSLSVP 1642 (1712)
Q Consensus 1569 llvallvgi~EELLFR-G~L~~~L~~~~g~~~AiIISSLLFALlHltl~~~i~lfLlGLvLa~ay~rttGSLWlp 1642 (1712)
+.+++-.|+.==++.| |.+....-+++. .=+++..+++|.+-.. +-.+..+++++-+..+|+- ++|.+
T Consensus 165 fGl~FelPli~~~L~~~giv~~~~l~~~R--r~~~v~~~iiaAiiTP-pD~isq~llaiPl~lLYEi---sI~i~ 233 (258)
T PRK10921 165 FGVSFEVPVAIVLLCWMGVTTPEDLRKKR--PYVLVGAFVVGMLLTP-PDVFSQTLLAIPMYCLFEI---GVFFS 233 (258)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHhcC--cHHhHHHHHHHHHcCC-CcHHHHHHHHHHHHHHHHH---HHHHH
Confidence 3333334555555555 444443333322 2233446666766544 6677777788888888876 35544
No 268
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=50.34 E-value=40 Score=43.83 Aligned_cols=83 Identities=13% Similarity=0.087 Sum_probs=49.1
Q ss_pred CcEEEEeCCCCC-----CChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHHHHHHHHHhh-----
Q 000293 216 DTTLLLVPGTAE-----GSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDICTAIQFIGKA----- 285 (1712)
Q Consensus 216 ~PtVVLLHGltG-----GS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~aVLd~I~kr----- 285 (1712)
+-.|+-|||..- -|++.|.|.++ .+.|+-++-+||-=.-..+ -|+ -++++--+--|+-+.
T Consensus 396 ~sli~HcHGGGfVAqsSkSHE~YLr~Wa---~aL~cPiiSVdYSLAPEaP--FPR-----aleEv~fAYcW~inn~allG 465 (880)
T KOG4388|consen 396 RSLIVHCHGGGFVAQSSKSHEPYLRSWA---QALGCPIISVDYSLAPEAP--FPR-----ALEEVFFAYCWAINNCALLG 465 (880)
T ss_pred ceEEEEecCCceeeeccccccHHHHHHH---HHhCCCeEEeeeccCCCCC--CCc-----HHHHHHHHHHHHhcCHHHhC
Confidence 457888999411 14456877665 4568999999984221111 122 234444444444321
Q ss_pred CCCCcEEEEEecHHHHHHHHHHH
Q 000293 286 RPWTTLMSVGWGYGANMLTKYLA 308 (1712)
Q Consensus 286 yP~spLvLVGhSMGG~IaL~YLg 308 (1712)
.-..+|+++|-|.|||+.+..+.
T Consensus 466 ~TgEriv~aGDSAGgNL~~~VaL 488 (880)
T KOG4388|consen 466 STGERIVLAGDSAGGNLCFTVAL 488 (880)
T ss_pred cccceEEEeccCCCcceeehhHH
Confidence 12469999999999998655443
No 269
>PRK09509 fieF ferrous iron efflux protein F; Reviewed
Probab=50.32 E-value=5.3e+02 Score=31.11 Aligned_cols=14 Identities=14% Similarity=0.249 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHH
Q 000293 1511 QNFLKGLIAGVMLV 1524 (1712)
Q Consensus 1511 r~ll~GLllGvlli 1524 (1712)
.+.+.+++.|++++
T Consensus 78 ~E~l~~l~~~~~l~ 91 (299)
T PRK09509 78 AESLAALAQSMFIS 91 (299)
T ss_pred HHHHHHHHHHHHHH
Confidence 34455555555443
No 270
>PLN02436 cellulose synthase A
Probab=50.08 E-value=2.3e+02 Score=39.91 Aligned_cols=18 Identities=22% Similarity=0.571 Sum_probs=11.6
Q ss_pred HHhhccccccchhHHHHH
Q 000293 1402 LLWGGLRGAMSLTEKLIL 1419 (1712)
Q Consensus 1402 ~~~~~~~~~~slt~~~~~ 1419 (1712)
=||+|+++-++|-.||.-
T Consensus 851 Pl~~g~~~~L~l~QRL~Y 868 (1094)
T PLN02436 851 PIWYGYGGGLKWLERFSY 868 (1094)
T ss_pred cchhcccccCCHHHHHHH
Confidence 357777666777766543
No 271
>PF13367 PrsW-protease: Protease prsW family
Probab=48.90 E-value=56 Score=36.56 Aligned_cols=79 Identities=9% Similarity=-0.039 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHhhc---CCchhhHHHHHHHh-hhcCCcchHHHHHHHHHHHHHHHHhcC-------
Q 000293 1568 GIVTATVVVLVEELLFRSWLPEEIAADL---DYHRGIIISGLAFA-LSQRSPQAIPGLWLLSLALAGVRQRSQ------- 1636 (1712)
Q Consensus 1568 ~llvallvgi~EELLFRG~L~~~L~~~~---g~~~AiIISSLLFA-LlHltl~~~i~lfLlGLvLa~ay~rtt------- 1636 (1712)
+..+++.-++.|.+.+.- +...+.. ......++.=.+++ ..|. ....++|+.++++..+..
T Consensus 83 g~a~GlGFa~~En~~Y~~---~~~~~~~~~~~~~~~~~~~R~~~~~~~H~-----~~t~i~g~~l~~~~~~~~~~~~~~~ 154 (191)
T PF13367_consen 83 GAAVGLGFAIMENILYIL---NAAEDNGGSVQGGLSTAILRGITSVPGHA-----LFTAIFGYGLGLAKRRRKRGFRLAL 154 (191)
T ss_pred hhHHHHHHHHHHHHHHHH---HhhhcccchhhhHHHHHHHHHHHHHhHHH-----HHHHHHHHHHHHHHhcccchHHHHH
Confidence 555667778889987653 1111111 11122233333443 5673 223334444444442211
Q ss_pred -CcchHHHHHHhHHhhhhh
Q 000293 1637 -GSLSVPIGLRTGIMASSF 1654 (1712)
Q Consensus 1637 -GSLWlpIGLHagWn~~~~ 1654 (1712)
.-+..++.+|+.||+...
T Consensus 155 ~~~~~~a~~lH~~~N~~~~ 173 (191)
T PF13367_consen 155 LLGFLLAVLLHGLWNFPLS 173 (191)
T ss_pred HHHHHHHHHHHHHHHhHHH
Confidence 236789999999998653
No 272
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=48.81 E-value=2.9e+02 Score=36.20 Aligned_cols=44 Identities=25% Similarity=0.271 Sum_probs=22.7
Q ss_pred HhhHHHHHhhcCCchhhHHHHHHHhhhcC-------CcchHHHHHHHHHHH
Q 000293 1585 SWLPEEIAADLDYHRGIIISGLAFALSQR-------SPQAIPGLWLLSLAL 1628 (1712)
Q Consensus 1585 G~L~~~L~~~~g~~~AiIISSLLFALlHl-------tl~~~i~lfLlGLvL 1628 (1712)
+++...+.++.+...-+.+++++||+.-+ .+..++.+++.|+..
T Consensus 271 al~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~ 321 (524)
T PF05977_consen 271 ALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAW 321 (524)
T ss_pred HHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 45566666666654445555555554433 233344455555433
No 273
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=48.73 E-value=83 Score=36.75 Aligned_cols=84 Identities=14% Similarity=0.116 Sum_probs=45.6
Q ss_pred CcEEEEEcCCCC-CCCCCCCCCCcccCcHHHHHHHHHHHHhhC-CCCcEEEEEecHHHHHHHHHHHHcCC---C-CCccE
Q 000293 245 GFFPVVMNPRGC-GGSPLTTSRLFTAADSDDICTAIQFIGKAR-PWTTLMSVGWGYGANMLTKYLAEVGE---R-TPLTA 318 (1712)
Q Consensus 245 GYrVVVfD~RGh-GgS~ltsprly~a~~tdDL~aVLd~I~kry-P~spLvLVGhSMGG~IaL~YLge~ge---~-s~V~A 318 (1712)
||.+..++++.. +.-.......|...-.+=...+.+.|+... +..+++++|+|.|+.++...+.+... . .....
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 677888888862 111000011122211122222223333321 45789999999999999888876532 1 12335
Q ss_pred EEEecCCCCh
Q 000293 319 VTCIDNPFDL 328 (1712)
Q Consensus 319 aVlIS~P~Dl 328 (1712)
.|+++.|-..
T Consensus 82 fVl~gnP~rp 91 (225)
T PF08237_consen 82 FVLIGNPRRP 91 (225)
T ss_pred EEEecCCCCC
Confidence 7778877554
No 274
>PF02028 BCCT: BCCT family transporter; InterPro: IPR000060 These prokaryotic transport proteins belong to a family known as BCCT (for Betaine / Carnitine / Choline Transporters) and are specific for compounds containing a quaternary nitrogen atom. The BCCT proteins contain 12 transmembrane regions and are energized by proton symport. They contain a conserved region with four tryptophans in their central region [].; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 2WSX_B 3HFX_A 2WSW_A 4DOJ_B 2WIT_C 4AIN_A 3P03_B.
Probab=48.09 E-value=1.3e+02 Score=39.20 Aligned_cols=35 Identities=17% Similarity=0.023 Sum_probs=31.8
Q ss_pred hhHHHHHHHhhhcCCcchHHHHHHHHHHHHHHHHh
Q 000293 1600 GIIISGLAFALSQRSPQAIPGLWLLSLALAGVRQR 1634 (1712)
Q Consensus 1600 AiIISSLLFALlHltl~~~i~lfLlGLvLa~ay~r 1634 (1712)
.....|+-++++|.++..+..+.+.|+.++|++++
T Consensus 118 ~A~~~A~~~~~fHWG~~~Wa~Y~~~~l~~ay~~y~ 152 (485)
T PF02028_consen 118 EAAEWAMAYSFFHWGFHAWAIYALVGLAIAYFFYN 152 (485)
T ss_dssp HHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHheeeee
Confidence 35588999999999999999999999999999887
No 275
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=48.04 E-value=3.3e+02 Score=33.91 Aligned_cols=38 Identities=32% Similarity=0.414 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHhhHHHHHhhcCCchhhHHHHHHHhhhcC
Q 000293 1575 VVLVEELLFRSWLPEEIAADLDYHRGIIISGLAFALSQR 1613 (1712)
Q Consensus 1575 vgi~EELLFRG~L~~~L~~~~g~~~AiIISSLLFALlHl 1613 (1712)
.-+.||.+++..=...+-...|.+ +.+++.+.++++|.
T Consensus 183 ~nV~~E~~v~~~~~~~~lg~~Glf-g~ii~~iq~~ile~ 220 (334)
T PF06027_consen 183 SNVLEEKLVKKAPRVEFLGMLGLF-GFIISGIQLAILER 220 (334)
T ss_pred HHHHHHHhcccCCHHHHHHHHHHH-HHHHHHHHHHheeh
Confidence 467899999987666655556654 66788889999998
No 276
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=46.22 E-value=74 Score=44.51 Aligned_cols=94 Identities=17% Similarity=0.231 Sum_probs=54.6
Q ss_pred CCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCcccCcHHHHH-HHHHHHHhhCCCCcEEE
Q 000293 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTAADSDDIC-TAIQFIGKARPWTTLMS 293 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a~~tdDL~-aVLd~I~kryP~spLvL 293 (1712)
..|+++|+|-+ +|.... +..++..+ ..+.+|.-- + +.-.....+++. ..|+.|++-.|..|..+
T Consensus 2122 e~~~~Ffv~pI-EG~tt~-l~~la~rl----------e~PaYglQ~-T--~~vP~dSies~A~~yirqirkvQP~GPYrl 2186 (2376)
T KOG1202|consen 2122 EEPPLFFVHPI-EGFTTA-LESLASRL----------EIPAYGLQC-T--EAVPLDSIESLAAYYIRQIRKVQPEGPYRL 2186 (2376)
T ss_pred cCCceEEEecc-ccchHH-HHHHHhhc----------CCcchhhhc-c--ccCCcchHHHHHHHHHHHHHhcCCCCCeee
Confidence 46899999987 444433 33344332 222222110 0 000112244544 35677777789999999
Q ss_pred EEecHHHHHHHHHHHHcCCCCCccEEEEec
Q 000293 294 VGWGYGANMLTKYLAEVGERTPLTAVTCID 323 (1712)
Q Consensus 294 VGhSMGG~IaL~YLge~ge~s~V~AaVlIS 323 (1712)
+|+|+|+.++..++....+......++++.
T Consensus 2187 ~GYSyG~~l~f~ma~~Lqe~~~~~~lillD 2216 (2376)
T KOG1202|consen 2187 AGYSYGACLAFEMASQLQEQQSPAPLILLD 2216 (2376)
T ss_pred eccchhHHHHHHHHHHHHhhcCCCcEEEec
Confidence 999999999988887654432333455554
No 277
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=45.99 E-value=67 Score=36.55 Aligned_cols=42 Identities=19% Similarity=0.303 Sum_probs=35.9
Q ss_pred ccchhHHHHHHHHh--hcCchhHHHHHHHHHHHHHHHHHHHhhh
Q 000293 1410 AMSLTEKLILFLHL--ADRPLLQRILGFVGMVLVLWSPVLVPLL 1451 (1712)
Q Consensus 1410 ~~slt~~~~~~~~~--~~~P~~~rIilFllmllllwlP~aI~l~ 1451 (1712)
||=++-+.+....- .++|.+.+.++-+....++|+.+.+...
T Consensus 140 amy~my~y~yr~~ad~sqr~~~~K~~lv~~~sm~lWi~v~i~t~ 183 (226)
T COG4858 140 AMYIMYYYAYRMRADNSQRPGTWKYLLVAVLSMLLWIAVMIATV 183 (226)
T ss_pred HHHHHHHHHHHhhcccccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 78889998888888 8999999999988888899988887443
No 278
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=45.86 E-value=1.4e+02 Score=38.48 Aligned_cols=128 Identities=18% Similarity=0.176 Sum_probs=72.9
Q ss_pred EEEEcC--CCcEEEEEecCCCcccccCCCCcEEEEeCCCCCCChhHHHHHHHHHHHhCC---------------------
Q 000293 189 VCVNTE--DGGVISLDWPSNLDLHEEHGLDTTLLLVPGTAEGSIEKRIRLFVCEALRRG--------------------- 245 (1712)
Q Consensus 189 e~Ltt~--DGg~LaLDW~~~~~~~~~~~~~PtVVLLHGltGGS~~sYir~La~~Llq~G--------------------- 245 (1712)
-+++.. +|..+.+ |+...+ .....+|.||-+-|++|.|.-. -.+.+.|
T Consensus 47 GYv~v~~~~~~~LFY-wf~eS~--~~P~~dPlvLWLnGGPGCSSl~------G~~~E~GPf~v~~~G~tL~~N~ySWnk~ 117 (454)
T KOG1282|consen 47 GYVTVNESEGRQLFY-WFFESE--NNPETDPLVLWLNGGPGCSSLG------GLFEENGPFRVKYNGKTLYLNPYSWNKE 117 (454)
T ss_pred ceEECCCCCCceEEE-EEEEcc--CCCCCCCEEEEeCCCCCccchh------hhhhhcCCeEEcCCCCcceeCCcccccc
Confidence 357776 4667766 443321 1223578999999998865422 1222333
Q ss_pred cEEEEEcCC-CCCCCCCCCCCCccc---CcHHHHHHHHHHHHhhCC---CCcEEEEEecHHHHHHHHHHHHc--C-----
Q 000293 246 FFPVVMNPR-GCGGSPLTTSRLFTA---ADSDDICTAIQFIGKARP---WTTLMSVGWGYGANMLTKYLAEV--G----- 311 (1712)
Q Consensus 246 YrVVVfD~R-GhGgS~ltsprly~a---~~tdDL~aVLd~I~kryP---~spLvLVGhSMGG~IaL~YLge~--g----- 311 (1712)
-.++.+|.| |.|-|-..++..+.. ....|...+|...-+++| ..++++.|.|++|..+=..+.+- +
T Consensus 118 aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~ 197 (454)
T KOG1282|consen 118 ANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCC 197 (454)
T ss_pred ccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhcccccc
Confidence 234555554 666663333322222 234677777765555777 56999999999997655444331 1
Q ss_pred -CCCCccEEEEecCCC
Q 000293 312 -ERTPLTAVTCIDNPF 326 (1712)
Q Consensus 312 -e~s~V~AaVlIS~P~ 326 (1712)
...+++|.+ |++|+
T Consensus 198 ~~~iNLkG~~-IGNg~ 212 (454)
T KOG1282|consen 198 KPNINLKGYA-IGNGL 212 (454)
T ss_pred CCcccceEEE-ecCcc
Confidence 123577654 55554
No 279
>COG1377 FlhB Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=45.35 E-value=2.5e+02 Score=35.28 Aligned_cols=74 Identities=31% Similarity=0.420 Sum_probs=41.1
Q ss_pred CCCCcchHHHHHHHHHhhcccCcchhhhhHHHHHhhc---cccccchhHHHHHHH---HhhcCchhHHHHHHHHHHHHHH
Q 000293 1370 KEDGEVDQERLVAMLADLGQKGGLLKLVGKLALLWGG---LRGAMSLTEKLILFL---HLADRPLLQRILGFVGMVLVLW 1443 (1712)
Q Consensus 1370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~slt~~~~~~~---~~~~~P~~~rIilFllmllllw 1443 (1712)
++.|.|-.-|=+.+++-| ++|=+.|+|.| .++.|++=...+.+. .+.....+.-+..|++-++...
T Consensus 22 rekG~v~kS~el~~a~~l--------l~g~~~l~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 93 (363)
T COG1377 22 REKGQVPKSRELTSAASL--------LVGFLLLFFFGSYFARRLSGFLRAFLEFPESMDLDDESALELIKALLLEILKAL 93 (363)
T ss_pred HHcCCCccchhHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHHH
Confidence 567888888877777654 67778888887 334444444444442 1222223333444444455555
Q ss_pred HHHHHhhh
Q 000293 1444 SPVLVPLL 1451 (1712)
Q Consensus 1444 lP~aI~l~ 1451 (1712)
+|+.+.+.
T Consensus 94 lp~~~~~~ 101 (363)
T COG1377 94 LPFLLVLL 101 (363)
T ss_pred HHHHHHHH
Confidence 55555443
No 280
>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes. ; GO: 0016021 integral to membrane
Probab=45.23 E-value=58 Score=43.93 Aligned_cols=94 Identities=19% Similarity=0.087 Sum_probs=0.0
Q ss_pred hhhHHHHHhhccccccchhHHHHHHHHhhcCchhH-----------HHHHHHHHHHHHHHHHHHhhhhhhhhccCCCCCc
Q 000293 1396 LVGKLALLWGGLRGAMSLTEKLILFLHLADRPLLQ-----------RILGFVGMVLVLWSPVLVPLLPTIVQSWTTNNPS 1464 (1712)
Q Consensus 1396 ~~~~~~~~~~~~~~~~slt~~~~~~~~~~~~P~~~-----------rIilFllmllllwlP~aI~l~p~Ll~~~~~~~p~ 1464 (1712)
+..|+.++|+-+--|=-+|+=.|-|+ ||+|+ +-+.|.++++++.+..=++.+
T Consensus 29 ~~~~~~~~w~~~~~~d~~~~~r~e~~----~p~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~------------- 91 (697)
T PF09726_consen 29 LYVKFLLVWALVLLADFMLEFRFEYL----WPFWLLLRSVYDSFKYQGLAFSVFFVCIAFTSDLICL------------- 91 (697)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHH----HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH-------------
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhheeecccCCcccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000293 1465 RIAEFACIVGLYIAVMILTMKWGRRVRGYENSLEQYGLDITSLPKVQNFLKGLIAGVMLVLLIQSLNAV 1533 (1712)
Q Consensus 1465 ~i~~l~~lv~Lyla~lILlilW~~~~~~~r~pls~lGL~~~~~~~~r~ll~GLllGvllillv~li~~l 1533 (1712)
+++-.-++.|+.-.++|+-..|...+ ++++..+++.+++.++
T Consensus 92 -----~~~p~~~~~~~~~~~v~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~ 133 (697)
T PF09726_consen 92 -----FFIPVHWLFFAASTYVWVQYVWHTDR----------------------GICLPTVSLWILFVYV 133 (697)
T ss_pred -----HHHHHHHHHHHHhHHHHHHHhhhccC----------------------CccHHHHHHHHHHHHH
No 281
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=44.91 E-value=1.8e+02 Score=37.76 Aligned_cols=27 Identities=30% Similarity=0.546 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhccC
Q 000293 1433 LGFVGMVLVLWSPVLVPLLPTIVQSWT 1459 (1712)
Q Consensus 1433 ilFllmllllwlP~aI~l~p~Ll~~~~ 1459 (1712)
+..++.++.+..|++++++|.++..|.
T Consensus 96 ~~~~L~l~aflSPiaflvLP~il~~~~ 122 (505)
T PF06638_consen 96 LASILGLLAFLSPIAFLVLPKILWRWQ 122 (505)
T ss_pred HHHHHHHHHHHhhHHHHHhcccccCcc
Confidence 334556677788999999987655554
No 282
>PLN02400 cellulose synthase
Probab=44.85 E-value=2.9e+02 Score=39.10 Aligned_cols=13 Identities=23% Similarity=0.232 Sum_probs=8.3
Q ss_pred HhhchhHHHhhhc
Q 000293 1307 AALGASALMVKQL 1319 (1712)
Q Consensus 1307 ~~~~~~~~~~~~~ 1319 (1712)
|...-++.|.|++
T Consensus 812 AP~~l~d~L~Qr~ 824 (1085)
T PLN02400 812 APINLSDRLNQVL 824 (1085)
T ss_pred CCCCHHHHHHHHH
Confidence 4555567777774
No 283
>PRK10369 heme lyase subunit NrfE; Provisional
Probab=43.93 E-value=9.5e+02 Score=32.19 Aligned_cols=8 Identities=25% Similarity=0.389 Sum_probs=4.9
Q ss_pred HHHhhccc
Q 000293 1383 MLADLGQK 1390 (1712)
Q Consensus 1383 ~~~~~~~~ 1390 (1712)
|++|+|+=
T Consensus 3 m~~elG~~ 10 (571)
T PRK10369 3 FLPEAGFL 10 (571)
T ss_pred cHHHHHHH
Confidence 56666664
No 284
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=43.75 E-value=1e+02 Score=36.82 Aligned_cols=93 Identities=17% Similarity=0.183 Sum_probs=55.5
Q ss_pred cEEEEeCCCCCCChh----HHHHHHHHHH-HhCCcEEEEEcCCCCCCC--------CCCC----CCCcccCcHHHHHHHH
Q 000293 217 TTLLLVPGTAEGSIE----KRIRLFVCEA-LRRGFFPVVMNPRGCGGS--------PLTT----SRLFTAADSDDICTAI 279 (1712)
Q Consensus 217 PtVVLLHGltGGS~~----sYir~La~~L-lq~GYrVVVfD~RGhGgS--------~lts----prly~a~~tdDL~aVL 279 (1712)
..||++=|...+... +.+..+...+ ...+-..+++-..|.|-. .... ...+..+..+.+..+.
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 356677764322211 3355566555 233446667778888871 1111 1112223456777788
Q ss_pred HHHHhhC-CCCcEEEEEecHHHHHHHHHHHH
Q 000293 280 QFIGKAR-PWTTLMSVGWGYGANMLTKYLAE 309 (1712)
Q Consensus 280 d~I~kry-P~spLvLVGhSMGG~IaL~YLge 309 (1712)
.++.+.| |..+|+++|||=|+.++-.++..
T Consensus 82 ~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 82 RFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 8886665 56789999999999887666654
No 285
>COG1269 NtpI Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion]
Probab=41.52 E-value=2.9e+02 Score=37.36 Aligned_cols=41 Identities=39% Similarity=0.458 Sum_probs=27.5
Q ss_pred CCcchHHHHHH---------HHHhhcccCcchhhhhHHHHHhhccccccch
Q 000293 1372 DGEVDQERLVA---------MLADLGQKGGLLKLVGKLALLWGGLRGAMSL 1413 (1712)
Q Consensus 1372 ~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl 1413 (1712)
=+|+|.-=.+| |++|+|+ |=+|-|+|.+++.-.+-|..+++
T Consensus 355 Y~EidPt~~~a~~Fp~fFG~M~gD~gy-Glll~l~sl~l~~~~~~~~~~~~ 404 (660)
T COG1269 355 YGEIDPTPFLALFFPLFFGIMFGDLGY-GLLLFLISLLLLRYFKKRLPEGL 404 (660)
T ss_pred CCCcCCcchHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHhcccccchhH
Confidence 38999988887 8999998 44555666665554443344444
No 286
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=41.12 E-value=99 Score=38.03 Aligned_cols=94 Identities=17% Similarity=0.222 Sum_probs=61.4
Q ss_pred CcEEEEeCCCCCC--Chh-HHHHHHHHHHHh-CCcEEEEEcCCCCCCCCC----------CC---CCCcccCcHHHHHHH
Q 000293 216 DTTLLLVPGTAEG--SIE-KRIRLFVCEALR-RGFFPVVMNPRGCGGSPL----------TT---SRLFTAADSDDICTA 278 (1712)
Q Consensus 216 ~PtVVLLHGltGG--S~~-sYir~La~~Llq-~GYrVVVfD~RGhGgS~l----------ts---prly~a~~tdDL~aV 278 (1712)
+..|+++-|..+- ..- ..+..+..-+.. .|-+++++-..|.|--.. +. ...|..+....++.+
T Consensus 31 k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~A 110 (423)
T COG3673 31 KRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREA 110 (423)
T ss_pred ceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHH
Confidence 4567777774221 111 134446655555 689999999999885411 10 113333445778888
Q ss_pred HHHHHhhC-CCCcEEEEEecHHHHHHHHHHHH
Q 000293 279 IQFIGKAR-PWTTLMSVGWGYGANMLTKYLAE 309 (1712)
Q Consensus 279 Ld~I~kry-P~spLvLVGhSMGG~IaL~YLge 309 (1712)
-.++...| |..+|+++|||-|+.++--+|+.
T Consensus 111 YrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 111 YRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 88887776 67899999999999887666655
No 287
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=40.57 E-value=2.6e+02 Score=37.86 Aligned_cols=15 Identities=33% Similarity=0.598 Sum_probs=11.4
Q ss_pred HHHHhhccccccchh
Q 000293 1400 LALLWGGLRGAMSLT 1414 (1712)
Q Consensus 1400 ~~~~~~~~~~~~slt 1414 (1712)
.++||||.+|-+.++
T Consensus 49 ~~~~~~~~~~~~~~~ 63 (711)
T TIGR00958 49 LGVLWLGALGILLNK 63 (711)
T ss_pred HHHHHHHHHHHHhhc
Confidence 478899888877655
No 288
>PF03154 Atrophin-1: Atrophin-1 family; InterPro: IPR002951 Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA (OMIM:125370) is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins [, ]. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteristic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity [].. This entry includes Atrophin-1 and related proteins.
Probab=40.51 E-value=86 Score=43.13 Aligned_cols=18 Identities=44% Similarity=0.414 Sum_probs=12.1
Q ss_pred HHHhhccccccchhHHHH
Q 000293 1401 ALLWGGLRGAMSLTEKLI 1418 (1712)
Q Consensus 1401 ~~~~~~~~~~~slt~~~~ 1418 (1712)
||.+-.+|-.||--+||-
T Consensus 799 a~agp~~~p~~~~~~~la 816 (982)
T PF03154_consen 799 ALAGPQLRPEMSYAERLA 816 (982)
T ss_pred hhcCCCCCccccccchhh
Confidence 333445688888888864
No 289
>PF07787 DUF1625: Protein of unknown function (DUF1625); InterPro: IPR012430 Sequences making up this family are derived from hypothetical proteins expressed by both prokaryotic and eukaryotic species. The region in question is approximately 250 residues long.
Probab=40.46 E-value=89 Score=36.78 Aligned_cols=89 Identities=13% Similarity=0.091 Sum_probs=40.0
Q ss_pred hHHHHHhhccccccchhHHHHHHHHhhcCch-hHHHHHHHHHHHHHHHHHHHhhhhhhhhccCC-CCCchhhHHHHHHHH
Q 000293 1398 GKLALLWGGLRGAMSLTEKLILFLHLADRPL-LQRILGFVGMVLVLWSPVLVPLLPTIVQSWTT-NNPSRIAEFACIVGL 1475 (1712)
Q Consensus 1398 ~~~~~~~~~~~~~~slt~~~~~~~~~~~~P~-~~rIilFllmllllwlP~aI~l~p~Ll~~~~~-~~p~~i~~l~~lv~L 1475 (1712)
++|.||.-|. +|..+=.-....-...-. ..|+++|++|++-+.+-+.++....-+.+... ..+.....+..++.+
T Consensus 156 ~~i~ll~~G~---~s~~e~f~~~~~~n~~~tW~lR~~G~llmf~G~~~~~~~l~~l~~~~P~lg~l~~~~~~~~~~~~s~ 232 (248)
T PF07787_consen 156 DKILLLEEGK---VSAEEMFAKEHSANNTLTWILRFIGWLLMFIGFFLLFSPLYTLVDWIPLLGNLVGFGLFLVAFIISF 232 (248)
T ss_pred CEEEEEEcCC---cCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhceeechhhhHHHHHHHHHHH
Confidence 6677776655 454432222222222222 35888888887765444333221100111111 111122222334455
Q ss_pred HHHHHHHHHHHhhe
Q 000293 1476 YIAVMILTMKWGRR 1489 (1712)
Q Consensus 1476 yla~lILlilW~~~ 1489 (1712)
.++++++.+.|+..
T Consensus 233 ~lsl~~Ia~aW~~y 246 (248)
T PF07787_consen 233 SLSLLTIALAWLFY 246 (248)
T ss_pred HHHHHHHHHhheee
Confidence 55556667777764
No 290
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=40.00 E-value=1.3e+03 Score=33.18 Aligned_cols=17 Identities=29% Similarity=0.595 Sum_probs=11.1
Q ss_pred HhhccccccchhHHHHH
Q 000293 1403 LWGGLRGAMSLTEKLIL 1419 (1712)
Q Consensus 1403 ~~~~~~~~~slt~~~~~ 1419 (1712)
||.|..+-|++-.||--
T Consensus 800 l~~g~~~~L~l~QRL~Y 816 (1044)
T PLN02915 800 LWYAYGGKLKWLERLAY 816 (1044)
T ss_pred cccccCCCCCHHHHHHH
Confidence 67776555777666543
No 291
>PRK11465 putative mechanosensitive channel protein; Provisional
Probab=39.76 E-value=6.1e+02 Score=34.89 Aligned_cols=74 Identities=14% Similarity=0.103 Sum_probs=44.9
Q ss_pred CcchHHHHHHHHHhhcccCcchhhhhHHHHHhhccccccchhHHHHHH--HHhh-cCchhHHHHHHHHHHHHHHHHHHHh
Q 000293 1373 GEVDQERLVAMLADLGQKGGLLKLVGKLALLWGGLRGAMSLTEKLILF--LHLA-DRPLLQRILGFVGMVLVLWSPVLVP 1449 (1712)
Q Consensus 1373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~slt~~~~~~--~~~~-~~P~~~rIilFllmllllwlP~aI~ 1449 (1712)
..+|+.++-..+.+|+ +-.+.-++.+|..=|-|-.|=.|+=.. -... +.+...+.+++++..++=.+|+++.
T Consensus 127 ~~~~~~~~~~a~~~~~-----~~~~~~~~~~~~~r~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~v~~~ 201 (741)
T PRK11465 127 KPFNPQTFSNALTHFL-----MLAVLVFGFYWLIRLCALPLYRKMGQWARQKNRERSNWLQLPAMIIGAFIIDLLLLALT 201 (741)
T ss_pred CCcCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999886 455666777776555544444443210 1122 3344444556677666667777664
Q ss_pred hh
Q 000293 1450 LL 1451 (1712)
Q Consensus 1450 l~ 1451 (1712)
..
T Consensus 202 ~~ 203 (741)
T PRK11465 202 LF 203 (741)
T ss_pred HH
Confidence 43
No 292
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=39.28 E-value=1.3e+03 Score=32.33 Aligned_cols=19 Identities=11% Similarity=-0.076 Sum_probs=15.3
Q ss_pred CCcchHHHHHHHHHHHHHH
Q 000293 1613 RSPQAIPGLWLLSLALAGV 1631 (1712)
Q Consensus 1613 ltl~~~i~lfLlGLvLa~a 1631 (1712)
+....|+..|++|+++++.
T Consensus 262 LggSGfLAVFVAGl~~gn~ 280 (810)
T TIGR00844 262 LGVDDLLVSFFAGTAFAWD 280 (810)
T ss_pred hccccHHHHHHHHHHHhcc
Confidence 3456799999999999874
No 293
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=38.97 E-value=22 Score=44.63 Aligned_cols=106 Identities=17% Similarity=0.061 Sum_probs=75.2
Q ss_pred CCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCCccc----CcHHHHHHHHHHHHhhCCCCc
Q 000293 215 LDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTTSRLFTA----ADSDDICTAIQFIGKARPWTT 290 (1712)
Q Consensus 215 ~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~ltsprly~a----~~tdDL~aVLd~I~kryP~sp 290 (1712)
++|+|+..-|.. -+...+...+.. ++ +-.-+.+.||=+|.|... |.-|.. ...+|.+.+++.++.-|+. +
T Consensus 62 drPtV~~T~GY~-~~~~p~r~Ept~-Ll--d~NQl~vEhRfF~~SrP~-p~DW~~Lti~QAA~D~Hri~~A~K~iY~~-k 135 (448)
T PF05576_consen 62 DRPTVLYTEGYN-VSTSPRRSEPTQ-LL--DGNQLSVEHRFFGPSRPE-PADWSYLTIWQAASDQHRIVQAFKPIYPG-K 135 (448)
T ss_pred CCCeEEEecCcc-cccCccccchhH-hh--ccceEEEEEeeccCCCCC-CCCcccccHhHhhHHHHHHHHHHHhhccC-C
Confidence 479999999973 333323222332 22 235578899999999533 222222 2358999999999999974 7
Q ss_pred EEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCCh
Q 000293 291 LMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDL 328 (1712)
Q Consensus 291 LvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl 328 (1712)
.+--|-|=||+.++.|=.-+|+ .+.+.|...+|.+.
T Consensus 136 WISTG~SKGGmTa~y~rrFyP~--DVD~tVaYVAP~~~ 171 (448)
T PF05576_consen 136 WISTGGSKGGMTAVYYRRFYPD--DVDGTVAYVAPNDV 171 (448)
T ss_pred ceecCcCCCceeEEEEeeeCCC--CCCeeeeeeccccc
Confidence 9999999999998876666665 58999998888775
No 294
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=38.89 E-value=4.5e+02 Score=27.61 Aligned_cols=26 Identities=23% Similarity=0.635 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc
Q 000293 1511 QNFLKGLIAGVMLVLLIQSLNAVLGC 1536 (1712)
Q Consensus 1511 r~ll~GLllGvllillv~li~~llG~ 1536 (1712)
|.+++|++.|++.+++++++..+...
T Consensus 65 kG~l~G~~~Gl~y~~il~lis~~~~~ 90 (116)
T PF12670_consen 65 KGWLHGLLVGLLYFLILLLISFLFGP 90 (116)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 45789999999998888888777543
No 295
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=38.84 E-value=3.6e+02 Score=38.08 Aligned_cols=22 Identities=27% Similarity=0.232 Sum_probs=16.1
Q ss_pred cchhhhhHHHHHhhccccccch
Q 000293 1392 GLLKLVGKLALLWGGLRGAMSL 1413 (1712)
Q Consensus 1392 ~~~~~~~~~~~~~~~~~~~~sl 1413 (1712)
+=|+|.=+++-++.++-.--|+
T Consensus 806 ~~L~l~QRL~Yl~~~~yp~~sl 827 (1044)
T PLN02915 806 GKLKWLERLAYINTIVYPFTSI 827 (1044)
T ss_pred CCCCHHHHHHHHHHHHHHHHHH
Confidence 3488888999888877655555
No 296
>PRK10429 melibiose:sodium symporter; Provisional
Probab=38.56 E-value=9.3e+02 Score=30.55 Aligned_cols=8 Identities=13% Similarity=-0.139 Sum_probs=4.2
Q ss_pred ccCccchh
Q 000293 1699 PRQPLLSK 1706 (1712)
Q Consensus 1699 ~~~~l~~k 1706 (1712)
+++|+.++
T Consensus 431 ~~y~l~~~ 438 (473)
T PRK10429 431 RYYRLNGD 438 (473)
T ss_pred HheeCCHH
Confidence 45666543
No 297
>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system []. Some members of this family have been annotated as putative ABC transporter permease proteins.
Probab=38.01 E-value=9.4e+02 Score=33.12 Aligned_cols=24 Identities=29% Similarity=0.479 Sum_probs=11.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhh
Q 000293 1429 LQRILGFVGMVLVLWSPVLVPLLP 1452 (1712)
Q Consensus 1429 ~~rIilFllmllllwlP~aI~l~p 1452 (1712)
+.+++-|++..++..+--++.++|
T Consensus 210 ~~~~~~~~~~~ilg~~lsa~~llP 233 (843)
T PF09586_consen 210 FKKILRFIGSSILGVGLSAFLLLP 233 (843)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555444444444444444
No 298
>TIGR00842 bcct choline/carnitine/betaine transport. properties inherent to their polypeptide chains.
Probab=37.94 E-value=87 Score=40.28 Aligned_cols=47 Identities=26% Similarity=0.142 Sum_probs=36.3
Q ss_pred hhHHHHHHHhhhcCCcchHHHHHHHHHHHHHHHHhcCCcchHHHHHH
Q 000293 1600 GIIISGLAFALSQRSPQAIPGLWLLSLALAGVRQRSQGSLSVPIGLR 1646 (1712)
Q Consensus 1600 AiIISSLLFALlHltl~~~i~lfLlGLvLa~ay~rttGSLWlpIGLH 1646 (1712)
...-.|+-++++|.++..+..+.+.|+.+||.+.|.+..+-++-.++
T Consensus 81 ~A~~~A~~~~~fHWG~~aWaiY~l~ala~aY~~~rk~~~~~iss~~~ 127 (453)
T TIGR00842 81 QAQEQALAYTLFHWGIHAWAIYALVGLALAYFHVRKGLPLRLSSALV 127 (453)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhheecCCCCchhhhhh
Confidence 35667999999999999999999999999997776444344444443
No 299
>KOG3533 consensus Inositol 1,4,5-trisphosphate receptor [Signal transduction mechanisms]
Probab=37.19 E-value=1.3e+02 Score=42.51 Aligned_cols=22 Identities=18% Similarity=0.535 Sum_probs=13.6
Q ss_pred HHHHHHHHHhhhccCCCCCcccc
Q 000293 468 VIEWLSAVELGLLKGRHPLLKDV 490 (1712)
Q Consensus 468 VlEFL~av~~~llkg~~p~~~d~ 490 (1712)
.++|.+.+.........| +.|+
T Consensus 857 tm~fVE~YL~~vv~q~~~-f~d~ 878 (2706)
T KOG3533|consen 857 TMAFVETYLMGVVNQSMP-FQDV 878 (2706)
T ss_pred HHHHHHHHHHHhhccccc-ccch
Confidence 667776666666666666 4443
No 300
>PF11872 DUF3392: Protein of unknown function (DUF3392); InterPro: IPR021813 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.
Probab=37.18 E-value=1.1e+02 Score=32.21 Aligned_cols=34 Identities=24% Similarity=0.286 Sum_probs=26.9
Q ss_pred HHHHhhcCchhHHHHHHHHHHHHHHHHHHHhhhh
Q 000293 1419 LFLHLADRPLLQRILGFVGMVLVLWSPVLVPLLP 1452 (1712)
Q Consensus 1419 ~~~~~~~~P~~~rIilFllmllllwlP~aI~l~p 1452 (1712)
....++.+|...|..+|+++..+...-+.+-..|
T Consensus 41 lrr~l~~~~Fi~Rt~~FIlicAFGYGll~v~~tP 74 (106)
T PF11872_consen 41 LRRLLSGYHFILRTLAFILICAFGYGLLIVWLTP 74 (106)
T ss_pred HHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4557899999999999999988776666665555
No 301
>PRK09950 putative transporter; Provisional
Probab=36.38 E-value=3.1e+02 Score=36.01 Aligned_cols=48 Identities=17% Similarity=0.092 Sum_probs=35.8
Q ss_pred hhhHHHHHHHhhhcCCcchHHHHHHHHHHHHH-HHHhcCCcchHHHHHH
Q 000293 1599 RGIIISGLAFALSQRSPQAIPGLWLLSLALAG-VRQRSQGSLSVPIGLR 1646 (1712)
Q Consensus 1599 ~AiIISSLLFALlHltl~~~i~lfLlGLvLa~-ay~rttGSLWlpIGLH 1646 (1712)
....--|+.++++|.++..+..+.+.|+.+|| .+.|.+..+-++-.++
T Consensus 126 ~~A~~~A~~~t~fHWG~~aWaiY~l~~l~iaY~~~~rk~~pl~iss~~~ 174 (506)
T PRK09950 126 PKALEYSVSYSFFHWGISAWATYALASLIMAYHFHVRKNKGLSLSGIIA 174 (506)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhcCCCCchHHhhH
Confidence 34466789999999999999999999999999 5545333355544443
No 302
>PRK09776 putative diguanylate cyclase; Provisional
Probab=36.35 E-value=7.2e+02 Score=34.88 Aligned_cols=10 Identities=40% Similarity=0.806 Sum_probs=5.7
Q ss_pred hhhhHHHHHh
Q 000293 1395 KLVGKLALLW 1404 (1712)
Q Consensus 1395 ~~~~~~~~~~ 1404 (1712)
|..|-++++|
T Consensus 19 ~~~~~~~~iW 28 (1092)
T PRK09776 19 RFPTTLAPLW 28 (1092)
T ss_pred cCCCCccccc
Confidence 4455566666
No 303
>PRK15419 proline:sodium symporter PutP; Provisional
Probab=36.13 E-value=5.7e+02 Score=33.19 Aligned_cols=34 Identities=26% Similarity=0.218 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHhheeecccCCcccccccccC
Q 000293 1470 ACIVGLYIAVMILTMKWGRRVRGYENSLEQYGLDITS 1506 (1712)
Q Consensus 1470 ~~lv~Lyla~lILlilW~~~~~~~r~pls~lGL~~~~ 1506 (1712)
..++.+|+.+++.+.+|..|+. +..++|-+..++
T Consensus 8 ~~~~~~y~~~~l~iG~~~~r~~---~s~~dy~lagr~ 41 (502)
T PRK15419 8 LVTFCVYIFGMILIGFIAWRST---KNFDDYILGGRS 41 (502)
T ss_pred HHHHHHHHHHHHHHHHHHhhcC---CChhHheeeCCC
Confidence 3456667777777777776542 336677776543
No 304
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=36.08 E-value=9.8e+02 Score=30.54 Aligned_cols=14 Identities=21% Similarity=0.112 Sum_probs=6.8
Q ss_pred HHHHHHHHHHHHHH
Q 000293 1618 IPGLWLLSLALAGV 1631 (1712)
Q Consensus 1618 ~i~lfLlGLvLa~a 1631 (1712)
++..+++|+.++..
T Consensus 355 ~~~~~l~G~g~g~~ 368 (495)
T PRK14995 355 WGLMALLGFSAASA 368 (495)
T ss_pred HHHHHHHHHhHHHH
Confidence 33455555554443
No 305
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=35.66 E-value=8.5e+02 Score=31.83 Aligned_cols=183 Identities=13% Similarity=0.093 Sum_probs=0.0
Q ss_pred cchhHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCCCCchhhHHHHHHHHHHHHHHHHHHHhhee
Q 000293 1411 MSLTEKLILFLHLADRPLLQRILGFVGMVLVLWSPVLVPLLPTIVQSWTTNNPSRIAEFACIVGLYIAVMILTMKWGRRV 1490 (1712)
Q Consensus 1411 ~slt~~~~~~~~~~~~P~~~rIilFllmllllwlP~aI~l~p~Ll~~~~~~~p~~i~~l~~lv~Lyla~lILlilW~~~~ 1490 (1712)
+.++=+-.....++++|+...++.+++.+....+--.+..+ ..+.+....................+.++++-+..++
T Consensus 221 ~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~y--y~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~ 298 (467)
T COG2211 221 VKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVY--YVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKK 298 (467)
T ss_pred ccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhhe--eEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q ss_pred ecccCCcccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCccccchhhHHHHHHHhhhhHHHHHHHHH
Q 000293 1491 RGYENSLEQYGLDITSLPKVQNFLKGLIAGVMLVLLIQSLNAVLGCVSFSWPSIVTSSLTAMAWLKVYGNISMLACQGIV 1570 (1712)
Q Consensus 1491 ~~~r~pls~lGL~~~~~~~~r~ll~GLllGvllillv~li~~llG~i~~~~~~~~~sa~~p~~~l~~~~~~~~lil~~ll 1570 (1712)
+++++.+ .+|.++.++..++.++++. .+..++++..++
T Consensus 299 ~gkk~~~--------------------~~~~~~~~i~~~~~~f~~~----------------------~~~~l~~~~~~i 336 (467)
T COG2211 299 FGKKKLF--------------------LIGLLLLAVGYLLLYFTPA----------------------GSVVLIVVALII 336 (467)
T ss_pred hchHHHH--------------------HHHHHHHHHHHHHHHhhcC----------------------cchHHHHHHHHH
Q ss_pred HHHHHHHH-----------------------HHHHHHHhhHHHHHhhcCCchhhHHHHHHHhhhcCCcch--HHHHHHHH
Q 000293 1571 TATVVVLV-----------------------EELLFRSWLPEEIAADLDYHRGIIISGLAFALSQRSPQA--IPGLWLLS 1625 (1712)
Q Consensus 1571 vallvgi~-----------------------EELLFRG~L~~~L~~~~g~~~AiIISSLLFALlHltl~~--~i~lfLlG 1625 (1712)
.++..++. |=+.|=+ ..+.++.|...|..+.+++.+..+..... =..-.+.|
T Consensus 337 ~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~---~tF~~K~g~ala~~~~g~~L~~~Gyv~~~~~Q~~~al~g 413 (467)
T COG2211 337 AGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSG---MTFFRKLGLALAGFIPGWILGAIGYVPNVSAQSASALFG 413 (467)
T ss_pred HHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHH---HHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHH
Q ss_pred HHHHHHHHhcCCcchHHHHHHhH
Q 000293 1626 LALAGVRQRSQGSLSVPIGLRTG 1648 (1712)
Q Consensus 1626 LvLa~ay~rttGSLWlpIGLHag 1648 (1712)
+.+.. +|+|.++|..
T Consensus 414 I~~~~--------~~~Pa~l~l~ 428 (467)
T COG2211 414 IRFLF--------IILPALLLLL 428 (467)
T ss_pred HHHHH--------HHHHHHHHHH
No 306
>COG4485 Predicted membrane protein [Function unknown]
Probab=34.75 E-value=5e+02 Score=35.32 Aligned_cols=34 Identities=18% Similarity=-0.060 Sum_probs=18.5
Q ss_pred chHHHHHHHHHHHHHHHHhcCCcchHHHHHHhHHh
Q 000293 1616 QAIPGLWLLSLALAGVRQRSQGSLSVPIGLRTGIM 1650 (1712)
Q Consensus 1616 ~~~i~lfLlGLvLa~ay~rttGSLWlpIGLHagWn 1650 (1712)
..++-++++++++.+.-++. ...|.++.+-+...
T Consensus 407 ~~iiL~l~l~~iy~l~l~~~-~kk~i~~~v~~iiI 440 (858)
T COG4485 407 VGIILLLLLLVIYKLSLWAF-KKKTISILVFIIII 440 (858)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 34444555555544433332 24788887776654
No 307
>PRK03557 zinc transporter ZitB; Provisional
Probab=34.55 E-value=9.3e+02 Score=29.39 Aligned_cols=49 Identities=12% Similarity=0.088 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHhheeecccCCcccccccccCchhhHHHHHHHHHHHHHHHHH
Q 000293 1471 CIVGLYIAVMILTMKWGRRVRGYENSLEQYGLDITSLPKVQNFLKGLIAGVMLVLLI 1527 (1712)
Q Consensus 1471 ~lv~Lyla~lILlilW~~~~~~~r~pls~lGL~~~~~~~~r~ll~GLllGvllillv 1527 (1712)
.+.-+...++.++..+..++-.+++ -.||.. ..+.+.+++.|++++++.
T Consensus 54 sl~D~~~~~~~l~a~~~s~kp~d~~--hpyG~~------r~E~l~al~~~~~l~~~~ 102 (312)
T PRK03557 54 MLTDAAALLFALLAVQFSRRPPTIR--HTFGWL------RLTTLAAFVNAIALVVIT 102 (312)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCC--CCCchH------HHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444333222 345543 234455555555544443
No 308
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=33.82 E-value=7.7e+02 Score=34.08 Aligned_cols=51 Identities=20% Similarity=0.377 Sum_probs=35.9
Q ss_pred hhhHHHHHHHhhhcCCcchHHHHHHHHHHHHHHHHhcCCcchHHHHHHhHHh
Q 000293 1599 RGIIISGLAFALSQRSPQAIPGLWLLSLALAGVRQRSQGSLSVPIGLRTGIM 1650 (1712)
Q Consensus 1599 ~AiIISSLLFALlHltl~~~i~lfLlGLvLa~ay~rttGSLWlpIGLHagWn 1650 (1712)
.+-++.++++++.....+..++++.++-+++.++.. .|.+..++|+=.+..
T Consensus 200 a~Gv~~Gli~~l~~~~~~~~~~~~af~GLlaG~fk~-~gK~g~~~g~~l~~~ 250 (764)
T TIGR02865 200 AGGVVIGVILGLANNANLYQIGVFGFAGLLGGIFKE-LGKIGTGIGYLVGFL 250 (764)
T ss_pred HHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhhcc-CCcceeeHHHHHHHH
Confidence 456778899999988776666666555555555544 678888888776653
No 309
>COG1269 NtpI Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion]
Probab=33.52 E-value=1.4e+03 Score=31.11 Aligned_cols=13 Identities=15% Similarity=-0.151 Sum_probs=9.2
Q ss_pred chHHHHHHhHHhh
Q 000293 1639 LSVPIGLRTGIMA 1651 (1712)
Q Consensus 1639 LWlpIGLHagWn~ 1651 (1712)
||+-...|+....
T Consensus 571 L~Al~La~~~ia~ 583 (660)
T COG1269 571 LLALGLAGASIAS 583 (660)
T ss_pred HHHHHHHHHHHHH
Confidence 7777788876543
No 310
>TIGR00353 nrfE c-type cytochrome biogenesis protein CcmF. The product of this gene is required for the biogenesis of C-type cytochromes. This gene is thought to have eleven transmembrane helices. Disruption of this gene in Paracoccus denitrificans, encoding a putative transporter, results in formation of an unstable apocytochrome c and deficiency in siderophore production.
Probab=32.70 E-value=1.3e+03 Score=30.96 Aligned_cols=15 Identities=13% Similarity=-0.111 Sum_probs=11.8
Q ss_pred CcchHHHHHHhHHhh
Q 000293 1637 GSLSVPIGLRTGIMA 1651 (1712)
Q Consensus 1637 GSLWlpIGLHagWn~ 1651 (1712)
.+.|.....|.|.-.
T Consensus 424 ~~~~g~~laH~Gval 438 (576)
T TIGR00353 424 RSQWGMLLAHLGVAL 438 (576)
T ss_pred hhhhhhhhhHHHHHH
Confidence 368999999998643
No 311
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=32.43 E-value=6.9e+02 Score=28.70 Aligned_cols=18 Identities=17% Similarity=0.217 Sum_probs=8.7
Q ss_pred hhhHHHHHHHHHHHHHHH
Q 000293 1508 PKVQNFLKGLIAGVMLVL 1525 (1712)
Q Consensus 1508 ~~~r~ll~GLllGvllil 1525 (1712)
.+++.++.+++..++.++
T Consensus 145 ~~~k~~~~~~~~~~~w~~ 162 (206)
T PF06570_consen 145 SWWKYILISVLAMVLWIV 162 (206)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 456666555444443333
No 312
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=31.89 E-value=1.9e+02 Score=35.69 Aligned_cols=86 Identities=16% Similarity=0.089 Sum_probs=50.1
Q ss_pred HHHHHHHHhCCcEEEEEcCCCCCCCCC-CCC-CCcccCcHHHHHHHHHHHHhhCCCCcE-----EEEEecH---------
Q 000293 235 RLFVCEALRRGFFPVVMNPRGCGGSPL-TTS-RLFTAADSDDICTAIQFIGKARPWTTL-----MSVGWGY--------- 298 (1712)
Q Consensus 235 r~La~~Llq~GYrVVVfD~RGhGgS~l-tsp-rly~a~~tdDL~aVLd~I~kryP~spL-----vLVGhSM--------- 298 (1712)
.+.+.+|++.||.|+++|+--.|.-.. ... ..+..++..|-..+-+.+.+..+..=+ ..||.|+
T Consensus 14 SHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~N 93 (329)
T COG1087 14 SHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDN 93 (329)
T ss_pred HHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECccccccchhhhCHHHHHhh
Confidence 357788999999999999987664422 221 134456666655444445444443323 3577774
Q ss_pred ---HHHHHHHHHHHcCCCCCccEEEEecC
Q 000293 299 ---GANMLTKYLAEVGERTPLTAVTCIDN 324 (1712)
Q Consensus 299 ---GG~IaL~YLge~ge~s~V~AaVlIS~ 324 (1712)
|-..++..+.+. .+...|.-|+
T Consensus 94 Nv~gTl~Ll~am~~~----gv~~~vFSSt 118 (329)
T COG1087 94 NVVGTLNLIEAMLQT----GVKKFIFSST 118 (329)
T ss_pred chHhHHHHHHHHHHh----CCCEEEEecc
Confidence 444444444444 3666665543
No 313
>COG1480 Predicted membrane-associated HD superfamily hydrolase [General function prediction only]
Probab=31.53 E-value=7.1e+02 Score=33.82 Aligned_cols=27 Identities=22% Similarity=0.342 Sum_probs=14.6
Q ss_pred hhhccccCcchhhhhhHHHHHHHHHHHH
Q 000293 1134 IEVDRRLGPYDRKEMESDLARDLERVAT 1161 (1712)
Q Consensus 1134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1161 (1712)
.||-|-++..+.+++|-.+-- +++++.
T Consensus 105 ~~vk~~~e~~~~~~~e~~~~~-v~~~~~ 131 (700)
T COG1480 105 NEVKRSLEENEDENTEYSLKQ-VKQLKD 131 (700)
T ss_pred HHHHhhhcccchhhHHHHHHH-HHHHHH
Confidence 355566666666666655442 444433
No 314
>PLN02248 cellulose synthase-like protein
Probab=31.45 E-value=1e+03 Score=34.14 Aligned_cols=15 Identities=13% Similarity=0.308 Sum_probs=7.9
Q ss_pred cCcCCccEEEEEeCCCCC
Q 000293 408 VGNIKIPVLFIQNDAGAV 425 (1712)
Q Consensus 408 L~kIkVPtLII~GDDp~V 425 (1712)
|+.|. ++|+-.||.-
T Consensus 366 LP~vD---vFV~TADP~k 380 (1135)
T PLN02248 366 LPGID---VFVSTADPEK 380 (1135)
T ss_pred CCcce---eEeecCCCcc
Confidence 54444 3555566653
No 315
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=31.34 E-value=9.1e+02 Score=34.05 Aligned_cols=185 Identities=14% Similarity=-0.005 Sum_probs=0.0
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCCCCchhhHHHHHHHHHHHHHHHHHHHhheeecccCCc------
Q 000293 1424 ADRPLLQRILGFVGMVLVLWSPVLVPLLPTIVQSWTTNNPSRIAEFACIVGLYIAVMILTMKWGRRVRGYENSL------ 1497 (1712)
Q Consensus 1424 ~~~P~~~rIilFllmllllwlP~aI~l~p~Ll~~~~~~~p~~i~~l~~lv~Lyla~lILlilW~~~~~~~r~pl------ 1497 (1712)
.++....-+......+..+..|++...+....................++.+.++++.++.++...........
T Consensus 135 ~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (1146)
T PRK08633 135 ENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKK 214 (1146)
T ss_pred ccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccccccc
Q ss_pred --------ccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCccccchhhHHHHHHHhhhhHHHHHHHH
Q 000293 1498 --------EQYGLDITSLPKVQNFLKGLIAGVMLVLLIQSLNAVLGCVSFSWPSIVTSSLTAMAWLKVYGNISMLACQGI 1569 (1712)
Q Consensus 1498 --------s~lGL~~~~~~~~r~ll~GLllGvllillv~li~~llG~i~~~~~~~~~sa~~p~~~l~~~~~~~~lil~~l 1569 (1712)
..+..-++. +.++.++.++.+..+................+.... .....+++...
T Consensus 215 ~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~---------------~~~~g~~~~~~ 278 (1146)
T PRK08633 215 YLFPKLLWRNLKLLRSD-RVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDN---------------TFQVQYLLAAS 278 (1146)
T ss_pred cccHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCc---------------HHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhcCCchhhHHHHHHHhhhcC-------CcchHHHHHHHHHHHHHHH
Q 000293 1570 VTATVVVLVEELLFRSWLPEEIAADLDYHRGIIISGLAFALSQR-------SPQAIPGLWLLSLALAGVR 1632 (1712)
Q Consensus 1570 lvallvgi~EELLFRG~L~~~L~~~~g~~~AiIISSLLFALlHl-------tl~~~i~lfLlGLvLa~ay 1632 (1712)
.++.+++ +++...+.++++....++++.+++++.-+ .+..++..+++|+..+...
T Consensus 279 ~ig~~~g--------~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 340 (1146)
T PRK08633 279 AIGIGIG--------SLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFI 340 (1146)
T ss_pred HHHHHHH--------HHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhh
No 316
>PRK09442 panF sodium/panthothenate symporter; Provisional
Probab=30.59 E-value=1.2e+03 Score=30.12 Aligned_cols=37 Identities=19% Similarity=0.198 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHhheeecccCCcccccccccC
Q 000293 1470 ACIVGLYIAVMILTMKWGRRVRGYENSLEQYGLDITS 1506 (1712)
Q Consensus 1470 ~~lv~Lyla~lILlilW~~~~~~~r~pls~lGL~~~~ 1506 (1712)
..++.+|+.+++.+.+|..|+.++.+..++|-+..++
T Consensus 6 ~~~i~~y~~~~~~ig~~~~r~~~~~~~~~dy~~agr~ 42 (483)
T PRK09442 6 ILPLVIYLVLVFGISVYAYRKRQAGDFLNEYFLGNRS 42 (483)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCcccceeeeCCC
Confidence 3445667777777888877654432235666665443
No 317
>PLN02248 cellulose synthase-like protein
Probab=30.51 E-value=4.9e+02 Score=37.15 Aligned_cols=35 Identities=17% Similarity=-0.088 Sum_probs=20.0
Q ss_pred HHHHHHHhhHHHHHhhcCCchhhHHHHHHHhhhcC
Q 000293 1579 EELLFRSWLPEEIAADLDYHRGIIISGLAFALSQR 1613 (1712)
Q Consensus 1579 EELLFRG~L~~~L~~~~g~~~AiIISSLLFALlHl 1613 (1712)
-|+.+.|.-++.+-+.-..|.---.|+.+||.++.
T Consensus 964 lE~~wsGvsl~~WWrnQq~W~I~~tSA~L~A~l~a 998 (1135)
T PLN02248 964 LEIKWSGITLEEWWRNEQFWLIGGTSAHLAAVLQG 998 (1135)
T ss_pred HHHhhccccHHHHhhhhheeeehhhHHHHHHHHHH
Confidence 37777777555543333455555555666666654
No 318
>PRK02975 putative common antigen polymerase; Provisional
Probab=30.47 E-value=8.4e+02 Score=30.85 Aligned_cols=43 Identities=14% Similarity=0.061 Sum_probs=28.2
Q ss_pred HhhcCCchhhHHHHHHHhhhcCC---------cchHHHHHHHHHHHHHHHHh
Q 000293 1592 AADLDYHRGIIISGLAFALSQRS---------PQAIPGLWLLSLALAGVRQR 1634 (1712)
Q Consensus 1592 ~~~~g~~~AiIISSLLFALlHlt---------l~~~i~lfLlGLvLa~ay~r 1634 (1712)
......|..-+++++.||+++.- ..++...+++|+.-+|+-.+
T Consensus 176 ~~tk~~Wl~fL~~tv~FG~ltYviVGGTRANiiiAf~lFlfiGi~rgwisl~ 227 (450)
T PRK02975 176 RQDSKAWLFFLVSTVAFGLLTYMIVGGTRANIIIAFALFLFIGIIRGWISLW 227 (450)
T ss_pred cccHHHHHHHHHHHHHHhcEEEEEEcCcHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 34444689999999999999972 12333444566666665443
No 319
>PF13347 MFS_2: MFS/sugar transport protein
Probab=30.32 E-value=8.4e+02 Score=30.33 Aligned_cols=17 Identities=29% Similarity=0.421 Sum_probs=11.9
Q ss_pred ceEEehhhHhhchhHHH
Q 000293 1299 SVMVGAVTAALGASALM 1315 (1712)
Q Consensus 1299 ~~~~~~~~~~~~~~~~~ 1315 (1712)
-+++|++..+++.-.++
T Consensus 74 ~~l~g~i~~~~~~~llf 90 (428)
T PF13347_consen 74 WILIGAILLALSFFLLF 90 (428)
T ss_pred EeehhhHHHHHHHHHhh
Confidence 35567788887777666
No 320
>PRK13592 ubiA prenyltransferase; Provisional
Probab=30.04 E-value=6.3e+02 Score=31.17 Aligned_cols=41 Identities=15% Similarity=0.066 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHhh-------HHHHHhhcCCchhhHHHHHHHhhh
Q 000293 1570 VTATVVVLVEELLFRSWL-------PEEIAADLDYHRGIIISGLAFALS 1611 (1712)
Q Consensus 1570 lvallvgi~EELLFRG~L-------~~~L~~~~g~~~AiIISSLLFALl 1611 (1712)
+++++..++.|++ |+.- ...+...+|...|..++++++.+.
T Consensus 182 l~afl~~l~rEI~-KdieD~gd~~~~~Tlpi~~G~kkA~~ia~~l~ii~ 229 (299)
T PRK13592 182 FTMYFPSLIWEVC-RKIRAPKDETEYVTYSKLFGYKKATRFIEVVTLLD 229 (299)
T ss_pred HHHHHHHHHHHHH-HhhcCCccccCCeeechhccchhHHHHHHHHHHHH
Confidence 4566778888876 2211 345566677666777666665443
No 321
>PRK11715 inner membrane protein; Provisional
Probab=29.91 E-value=9.7e+02 Score=31.08 Aligned_cols=21 Identities=33% Similarity=0.442 Sum_probs=13.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHH
Q 000293 1509 KVQNFLKGLIAGVMLVLLIQS 1529 (1712)
Q Consensus 1509 ~~r~ll~GLllGvllillv~l 1529 (1712)
....++.|+++.++.++++.+
T Consensus 331 piQYlLVGlAl~lFYLLLLSl 351 (436)
T PRK11715 331 PVQYLLVGLALVLFYLLLLSL 351 (436)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 466777777776665555433
No 322
>PRK02983 lysS lysyl-tRNA synthetase; Provisional
Probab=29.58 E-value=2.7e+02 Score=39.76 Aligned_cols=218 Identities=14% Similarity=0.002 Sum_probs=0.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCCCCchhhHHHHHHHHHHHHHHHHHHHhheeecccCCcccccccccC
Q 000293 1427 PLLQRILGFVGMVLVLWSPVLVPLLPTIVQSWTTNNPSRIAEFACIVGLYIAVMILTMKWGRRVRGYENSLEQYGLDITS 1506 (1712)
Q Consensus 1427 P~~~rIilFllmllllwlP~aI~l~p~Ll~~~~~~~p~~i~~l~~lv~Lyla~lILlilW~~~~~~~r~pls~lGL~~~~ 1506 (1712)
|.+..++++++.++.++..+.-.+.. .+..+..-.+..+..+.. ..+...++++++.+..+++.
T Consensus 11 p~~~~~~~~~~~~~~l~~~v~p~~~~-~~~~~~~~~~~~~~~~~~-~sl~~g~~Ll~lA~gL~rr~-------------- 74 (1094)
T PRK02983 11 PAAAGWTVGVIATLSLLASVSPLLRW-IIRVPREFVDDYLFNFPD-TSLAWAFVLALLAAALRRRK-------------- 74 (1094)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccchh-hhhhHHHhcChhhhCCCc-hHHHHHHHHHHHHHHHHHhH--------------
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCccccchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000293 1507 LPKVQNFLKGLIAGVMLVLLIQSLNAVLGCVSFSWPSIVTSSLTAMAWLKVYGNISMLACQGIVTATVVVLVEELLFRSW 1586 (1712)
Q Consensus 1507 ~~~~r~ll~GLllGvllillv~li~~llG~i~~~~~~~~~sa~~p~~~l~~~~~~~~lil~~llvallvgi~EELLFRG~ 1586 (1712)
+..+.+..++++..+++.++.++.....+....... ...++..++.+++++.+ +++|..
T Consensus 75 -r~Aw~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-----------------~~~~~~a~~~~~~~~~L---~~~R~~ 133 (1094)
T PRK02983 75 -RAAWWVLLAYLVLAALLNVALLALGVNTAAETFGEN-----------------SLSIIGFAVHVVAIVLL---VLARRE 133 (1094)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhcccccccccccch-----------------hhhHHHHHHHHHHHHHH---HHHHhh
Q ss_pred hHHHHHhhcCCchhhHHHHHHHhhhcCCcchHHHHHHHHHHHHHHHHhcCCcchHHHHHHhHHhhhhheeecccceeecC
Q 000293 1587 LPEEIAADLDYHRGIIISGLAFALSQRSPQAIPGLWLLSLALAGVRQRSQGSLSVPIGLRTGIMASSFVLQKGGLLTYKP 1666 (1712)
Q Consensus 1587 L~~~L~~~~g~~~AiIISSLLFALlHltl~~~i~lfLlGLvLa~ay~rttGSLWlpIGLHagWn~~~~~l~v~Gll~~t~ 1666 (1712)
+.... .....+.++. +.....++.+++++.+++...++ ++....+.+....+.|+.-...
T Consensus 134 F~~~~-~~~s~~~~~~------------~l~~~~~~~~~~~~~l~~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~ 193 (1094)
T PRK02983 134 FPARV-RRGALRKALA------------VLVGGLAVGILVGWGLVELFPGS-------LAPPERLGWALNRVVGFALADP 193 (1094)
T ss_pred ccCCC-CcchHHHHHH------------HHHHHHHHHHHHHHHhheeecCC-------CCCcccHHHHHHhhcccccCcc
Q ss_pred CCCceeecCCCCCcchhHHHHHHHHHHHHhhhccCc
Q 000293 1667 SLPLWITGTHPFQPFSGVVGLAFSLILAIILYPRQP 1702 (1712)
Q Consensus 1667 ~gp~wLTGg~~fgPe~Gv~glv~l~l~a~il~~~~~ 1702 (1712)
....+..... .+...|+++.+++++.++.+++...
T Consensus 194 ~~~~~~~~~~-~~~~~~~~~~~~l~~a~~~l~r~~~ 228 (1094)
T PRK02983 194 DLFTGHPPVW-VNALLGLFGAAALIAALIVLFRSQR 228 (1094)
T ss_pred ccccccchHH-HHHHHHHHHHHHHHHHHHHHhCCCC
No 323
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=29.46 E-value=1.4e+02 Score=35.59 Aligned_cols=89 Identities=19% Similarity=0.239 Sum_probs=53.3
Q ss_pred HhhcCCchhhHHHHHHHhhhcCCcchHHHHHHHHHHHHHHHHhcCCcchHHHHHHhHHhhhhheeecccceeecCCCCce
Q 000293 1592 AADLDYHRGIIISGLAFALSQRSPQAIPGLWLLSLALAGVRQRSQGSLSVPIGLRTGIMASSFVLQKGGLLTYKPSLPLW 1671 (1712)
Q Consensus 1592 ~~~~g~~~AiIISSLLFALlHltl~~~i~lfLlGLvLa~ay~rttGSLWlpIGLHagWn~~~~~l~v~Gll~~t~~gp~w 1671 (1712)
......++-.++++++++.-.+....++.. +||.++. -||.++-+=.||-++-|++ +......+
T Consensus 49 ~~~p~f~p~amlgG~lW~~gN~~~vpii~~--iGLglg~-------liW~s~n~l~Gw~~grfGl-----Fg~~~~~~-- 112 (254)
T PF07857_consen 49 LGFPPFYPWAMLGGALWATGNILVVPIIKT--IGLGLGM-------LIWGSVNCLTGWASGRFGL-----FGLDPQVP-- 112 (254)
T ss_pred cCCCcceeHHHhhhhhhhcCceeehhHhhh--hhhHHHH-------HHHHHHHHHHHHHHhhcee-----cccccccc--
Confidence 333456777888999999887654444444 4555555 2888888889998765532 21111211
Q ss_pred eecCCCCCcchhHHHHHHHHHHHHhhhccCc
Q 000293 1672 ITGTHPFQPFSGVVGLAFSLILAIILYPRQP 1702 (1712)
Q Consensus 1672 LTGg~~fgPe~Gv~glv~l~l~a~il~~~~~ 1702 (1712)
..|.-..+|++++++-..++.+.|+
T Consensus 113 ------~~~~Ln~~G~~l~~~~~~~f~fik~ 137 (254)
T PF07857_consen 113 ------SSPWLNYIGVALVLVSGIIFSFIKS 137 (254)
T ss_pred ------chhHHHHHHHHHHHHHHHheeeecC
Confidence 1233356777777666666666665
No 324
>PLN02436 cellulose synthase A
Probab=29.43 E-value=6.6e+02 Score=35.85 Aligned_cols=41 Identities=15% Similarity=0.025 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHhhHHHHHhhcCCchhhHHHHHHHhhhcC
Q 000293 1572 ATVVVLVEELLFRSWLPEEIAADLDYHRGIIISGLAFALSQR 1613 (1712)
Q Consensus 1572 allvgi~EELLFRG~L~~~L~~~~g~~~AiIISSLLFALlHl 1613 (1712)
..+.++.| +++.|+=.+.+-+.-..|.---+||-+||+++.
T Consensus 917 ~~~~~lLE-~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~ 957 (1094)
T PLN02436 917 IAATGILE-MQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQG 957 (1094)
T ss_pred HHHHHHHH-HHhccccHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 33345555 887787666544444466666678888888775
No 325
>PRK11462 putative transporter; Provisional
Probab=29.42 E-value=1.3e+03 Score=29.41 Aligned_cols=11 Identities=18% Similarity=0.048 Sum_probs=5.5
Q ss_pred hhhccCccchh
Q 000293 1696 ILYPRQPLLSK 1706 (1712)
Q Consensus 1696 il~~~~~l~~k 1706 (1712)
+++++.|+.+|
T Consensus 423 ~~~~~y~l~~~ 433 (460)
T PRK11462 423 IAKRYYSLTTH 433 (460)
T ss_pred HHHHhccCCHH
Confidence 33344566544
No 326
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=28.45 E-value=4.5e+02 Score=32.88 Aligned_cols=30 Identities=23% Similarity=0.152 Sum_probs=17.6
Q ss_pred ccccchhHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHhhh
Q 000293 1408 RGAMSLTEKLILFLHLADRPLLQRILGFVGMVLVLWSPVLVPLL 1451 (1712)
Q Consensus 1408 ~~~~slt~~~~~~~~~~~~P~~~rIilFllmllllwlP~aI~l~ 1451 (1712)
.|.||| ||+ .+..|+.|+++-..-..+..+
T Consensus 2 ~~~~~~-~~~-------------~~~~~~~~~~~q~~~~~~~~~ 31 (358)
T PLN00411 2 AGTVSL-WRR-------------EAVFLTAMLATETSVVGISTL 31 (358)
T ss_pred Ccchhh-hhh-------------ccchHHHHHHHHHHHHHHHHH
Confidence 478898 554 445566666665555555444
No 327
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=28.36 E-value=1.2e+03 Score=30.21 Aligned_cols=20 Identities=30% Similarity=0.494 Sum_probs=12.2
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 000293 1509 KVQNFLKGLIAGVMLVLLIQ 1528 (1712)
Q Consensus 1509 ~~r~ll~GLllGvllillv~ 1528 (1712)
....++.|+++.++.++++.
T Consensus 325 piQY~LVGlAl~lFYlLLLS 344 (430)
T PF06123_consen 325 PIQYLLVGLALVLFYLLLLS 344 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 46677777766665555443
No 328
>KOG1419 consensus Voltage-gated K+ channel KCNQ [Inorganic ion transport and metabolism]
Probab=28.35 E-value=1.3e+02 Score=39.30 Aligned_cols=57 Identities=9% Similarity=-0.031 Sum_probs=29.8
Q ss_pred HhhcCCchhhHHHHHHHhhhcC-Cc-----chHHHHHHHHHHHHHHHHhc----CCcchHHHHHHhHHhhhh
Q 000293 1592 AADLDYHRGIIISGLAFALSQR-SP-----QAIPGLWLLSLALAGVRQRS----QGSLSVPIGLRTGIMASS 1653 (1712)
Q Consensus 1592 ~~~~g~~~AiIISSLLFALlHl-tl-----~~~i~lfLlGLvLa~ay~rt----tGSLWlpIGLHagWn~~~ 1653 (1712)
-++.|.| =++.|++|+ |- -+ ..|+.++ +.-+|.|+.++. .+|--.+--.|+-|...+
T Consensus 213 DRrggTW--KLLGSvV~a--H~~ELiTt~YIGFL~LI-fsSflVYLaEKd~~~e~~n~~F~TyADALWWG~I 279 (654)
T KOG1419|consen 213 DRRGGTW--KLLGSVVYA--HSKELITTWYIGFLVLI-FSSFLVYLAEKDAQGEGTNDEFPTYADALWWGVI 279 (654)
T ss_pred hccCchh--hhhhhhhhh--hHHHHHHHHHHHHHHHH-HHHHHHHHhhcccccccccccchhHHHHHHhhhe
Confidence 4555666 456677764 65 11 1222222 222445555663 145677777888775544
No 329
>TIGR02908 CoxD_Bacillus cytochrome c oxidase, subunit IVB. This model represents a small clade of cytochrome oxidase subunit IV's found in the Bacilli.
Probab=28.28 E-value=7.5e+02 Score=26.36 Aligned_cols=33 Identities=12% Similarity=0.201 Sum_probs=26.8
Q ss_pred HHHHhhcCchhHHHHHHHHHHHHHHHHHHHhhh
Q 000293 1419 LFLHLADRPLLQRILGFVGMVLVLWSPVLVPLL 1451 (1712)
Q Consensus 1419 ~~~~~~~~P~~~rIilFllmllllwlP~aI~l~ 1451 (1712)
...+-+.+-...-+++|++.+++..+|+.+...
T Consensus 16 ~~~~~~~~~~k~yviGFiLSiiLT~I~F~~V~~ 48 (110)
T TIGR02908 16 FQKAKNAEEMKKQIVTFALMIFLTLIAFFAVML 48 (110)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334455677778899999999999999999765
No 330
>COG3336 Predicted membrane protein [Function unknown]
Probab=28.20 E-value=2.3e+02 Score=34.62 Aligned_cols=60 Identities=13% Similarity=-0.189 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHhhHH--------HHHhhcCCchhhHHHHHHHhhhcCCc-------------chHHHHHHHHHHHHHHHH
Q 000293 1575 VVLVEELLFRSWLPE--------EIAADLDYHRGIIISGLAFALSQRSP-------------QAIPGLWLLSLALAGVRQ 1633 (1712)
Q Consensus 1575 vgi~EELLFRG~L~~--------~L~~~~g~~~AiIISSLLFALlHltl-------------~~~i~lfLlGLvLa~ay~ 1633 (1712)
+.+.++.+.++.-.. .+.--.+++.|.++-..+|-++|.+. ..-+.+|+.|+++-|...
T Consensus 99 ~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~P~vA~ilfig~~~~~hvpplfda~v~~p~~H~lm~~~~f~~aylfww~mI 178 (299)
T COG3336 99 VTLALRALPPLGRGALAWLLVSRFTKFLSHPIVALILFIGAFWAWHVPPLFDAAVTSPTLHLLMNLLFFLSAYLFWWAMI 178 (299)
T ss_pred HHHHHHhccCCCcchhHHHhhhHHHHHhhhHHHHHHHHHHHHHHhccchhhhhhhhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 356677666544333 22223357899999999999999942 112334667777777665
Q ss_pred h
Q 000293 1634 R 1634 (1712)
Q Consensus 1634 r 1634 (1712)
+
T Consensus 179 ~ 179 (299)
T COG3336 179 G 179 (299)
T ss_pred c
Confidence 3
No 331
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=27.92 E-value=5.3e+02 Score=39.74 Aligned_cols=26 Identities=12% Similarity=0.252 Sum_probs=15.0
Q ss_pred HHHHHhhHHHHHhhcCCchhhHHHHHHH
Q 000293 1581 LLFRSWLPEEIAADLDYHRGIIISGLAF 1608 (1712)
Q Consensus 1581 LLFRG~L~~~L~~~~g~~~AiIISSLLF 1608 (1712)
++.=+|++..+..+. ..|.++++++|
T Consensus 744 ~I~~~fliS~fFska--~~A~~~~~li~ 769 (2272)
T TIGR01257 744 TIMQCFLLSTFFSKA--SLAAACSGVIY 769 (2272)
T ss_pred HHHHHHHHHHHhCch--HHHHHHHHHHH
Confidence 444566677776653 34555565555
No 332
>TIGR00400 mgtE Mg2+ transporter (mgtE). This family of prokaryotic proteins models a class of Mg++ transporter first described in Bacillus firmus. May form a homodimer.
Probab=27.90 E-value=1.4e+03 Score=29.38 Aligned_cols=78 Identities=13% Similarity=0.132 Sum_probs=42.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCccccchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000293 1508 PKVQNFLKGLIAGVMLVLLIQSLNAVLGCVSFSWPSIVTSSLTAMAWLKVYGNISMLACQGIVTATVVVLVEELLFRSWL 1587 (1712)
Q Consensus 1508 ~~~r~ll~GLllGvllillv~li~~llG~i~~~~~~~~~sa~~p~~~l~~~~~~~~lil~~llvallvgi~EELLFRG~L 1587 (1712)
..+|+++.|+++|+++.++.+++.++.+. ... ... . +.+.+++..++++ +=|++
T Consensus 354 ~~~~e~~v~~~~g~~~g~~~~~~~~~~~~-----~~~-------~~~------~--v~~~~~~~~~~~~------~~G~~ 407 (449)
T TIGR00400 354 VILREICVSILVGAILASVNFLRIVFFQG-----KLL-------IAF------V--VSSSLFVSLTVAK------ILGGL 407 (449)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----Cch-------HHH------H--HHHHHHHHHHHHH------HHHHH
Confidence 45788889988887777666665554311 110 000 0 0011111112222 34777
Q ss_pred HHHHHhhcCCchhhHHHHHHHhhh
Q 000293 1588 PEEIAADLDYHRGIIISGLAFALS 1611 (1712)
Q Consensus 1588 ~~~L~~~~g~~~AiIISSLLFALl 1611 (1712)
...+.+++|.=+|.+.+-++=++.
T Consensus 408 lp~~~~k~~~DPa~~s~p~itt~~ 431 (449)
T TIGR00400 408 LPIVAKLLKLDPALMSGPLITTIA 431 (449)
T ss_pred HHHHHHHcCCChhhhhhhHHHHHH
Confidence 888889999877776655554443
No 333
>PLN03159 cation/H(+) antiporter 15; Provisional
Probab=27.90 E-value=1.7e+03 Score=31.23 Aligned_cols=9 Identities=33% Similarity=0.143 Sum_probs=4.6
Q ss_pred ccccccccc
Q 000293 1497 LEQYGLDIT 1505 (1712)
Q Consensus 1497 ls~lGL~~~ 1505 (1712)
+.++|+-.+
T Consensus 189 L~Elkll~s 197 (832)
T PLN03159 189 LAEIKLINT 197 (832)
T ss_pred HHHcCcccC
Confidence 445665444
No 334
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=27.81 E-value=7.8e+02 Score=32.79 Aligned_cols=23 Identities=17% Similarity=0.414 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhh
Q 000293 1431 RILGFVGMVLVLWSPVLVPLLPT 1453 (1712)
Q Consensus 1431 rIilFllmllllwlP~aI~l~p~ 1453 (1712)
-+..|+.-+++.+.|.+++++|.
T Consensus 169 l~~afl~Glll~l~PCvlP~lpi 191 (571)
T PRK00293 169 LLWFFLIGIGLAFTPCVLPMYPI 191 (571)
T ss_pred HHHHHHHHHHHhccchhhHhHHH
Confidence 34566677777889999988883
No 335
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=27.67 E-value=5.6e+02 Score=36.51 Aligned_cols=17 Identities=24% Similarity=0.647 Sum_probs=10.2
Q ss_pred HhhccccccchhHHHHH
Q 000293 1403 LWGGLRGAMSLTEKLIL 1419 (1712)
Q Consensus 1403 ~~~~~~~~~slt~~~~~ 1419 (1712)
||.|.++-++|-.||.-
T Consensus 836 l~~G~~~rL~l~QRL~Y 852 (1079)
T PLN02638 836 IWYGYGGRLKWLERFAY 852 (1079)
T ss_pred cccccCCCCCHHHHHHH
Confidence 46676555777666543
No 336
>PLN02189 cellulose synthase
Probab=27.62 E-value=6.4e+02 Score=35.84 Aligned_cols=43 Identities=19% Similarity=0.067 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhcCCchhhHHHHHHHhhhcC
Q 000293 1570 VTATVVVLVEELLFRSWLPEEIAADLDYHRGIIISGLAFALSQR 1613 (1712)
Q Consensus 1570 lvallvgi~EELLFRG~L~~~L~~~~g~~~AiIISSLLFALlHl 1613 (1712)
+...+..+.| +...|.=.+.+-+.-..|.-.-+||-+||+++.
T Consensus 861 ~~~~~~~llE-~~~sG~s~~~WWrnQq~w~I~~~Sa~Lfavl~~ 903 (1040)
T PLN02189 861 MSIFATGILE-LRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQG 903 (1040)
T ss_pred HHHHHHHHHH-HHhcCCcHHHHhhhhhHHHHhhhHHHHHHHHHH
Confidence 3334457777 888887666555554567666678888888775
No 337
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=27.24 E-value=1e+02 Score=33.23 Aligned_cols=45 Identities=22% Similarity=0.321 Sum_probs=32.3
Q ss_pred EEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCC
Q 000293 219 LLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRGCGGSPLTT 263 (1712)
Q Consensus 219 VVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RGhGgS~lts 263 (1712)
+|.+-|..+..-+..++.++..|.++||+|.++=+=+||......
T Consensus 2 vv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~~d~ 46 (140)
T PF03205_consen 2 VVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFEIDP 46 (140)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTTCST
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcccCC
Confidence 566667665555668999999999999999988888887765443
No 338
>COG3859 Predicted membrane protein [Function unknown]
Probab=26.62 E-value=2.1e+02 Score=32.40 Aligned_cols=16 Identities=19% Similarity=0.382 Sum_probs=13.6
Q ss_pred chhhHHHHHHHhhhcC
Q 000293 1598 HRGIIISGLAFALSQR 1613 (1712)
Q Consensus 1598 ~~AiIISSLLFALlHl 1613 (1712)
+.|-++++++||++|+
T Consensus 53 ~kaG~~tGLl~Gll~~ 68 (185)
T COG3859 53 LKAGLLTGLLWGLLHL 68 (185)
T ss_pred hHHHHHHHHHHHHHHH
Confidence 3477889999999998
No 339
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.22 E-value=1.4e+02 Score=33.89 Aligned_cols=50 Identities=14% Similarity=0.230 Sum_probs=37.0
Q ss_pred HHHHHHHhh-CCCCcEEEEEecHHHHHHHHHHHHcCCCCCccEEEEecCCCChh
Q 000293 277 TAIQFIGKA-RPWTTLMSVGWGYGANMLTKYLAEVGERTPLTAVTCIDNPFDLE 329 (1712)
Q Consensus 277 aVLd~I~kr-yP~spLvLVGhSMGG~IaL~YLge~ge~s~V~AaVlIS~P~Dl~ 329 (1712)
+.-+|+.+. .|. ....-|.||||..++++.-++|+ .++++|++|..++..
T Consensus 89 AyerYv~eEalpg-s~~~sgcsmGayhA~nfvfrhP~--lftkvialSGvYdar 139 (227)
T COG4947 89 AYERYVIEEALPG-STIVSGCSMGAYHAANFVFRHPH--LFTKVIALSGVYDAR 139 (227)
T ss_pred HHHHHHHHhhcCC-CccccccchhhhhhhhhheeChh--HhhhheeecceeeHH
Confidence 333455433 453 45678999999999999988876 678888888888764
No 340
>PRK03356 L-carnitine/gamma-butyrobetaine antiporter; Provisional
Probab=26.10 E-value=4.8e+02 Score=34.28 Aligned_cols=40 Identities=23% Similarity=0.177 Sum_probs=34.3
Q ss_pred hhhHHHHHHHhhhcCCcchHHHHHHHHHHHHHHHHhcCCc
Q 000293 1599 RGIIISGLAFALSQRSPQAIPGLWLLSLALAGVRQRSQGS 1638 (1712)
Q Consensus 1599 ~AiIISSLLFALlHltl~~~i~lfLlGLvLa~ay~rttGS 1638 (1712)
....--++.++++|.++..+..+.+.|+.+||.+++....
T Consensus 128 ~~A~~~A~~~~~fHWG~~aWaiY~~~~la~ay~~y~~~~p 167 (504)
T PRK03356 128 TGAKELGLAYSLFHWGPLPWATYSFLSVAFGYFFFVRKMD 167 (504)
T ss_pred HHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4566789999999999999999999999999998874444
No 341
>COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=25.62 E-value=1.1e+03 Score=32.50 Aligned_cols=19 Identities=11% Similarity=-0.088 Sum_probs=9.7
Q ss_pred HhheeecccCCcccccccc
Q 000293 1486 WGRRVRGYENSLEQYGLDI 1504 (1712)
Q Consensus 1486 W~~~~~~~r~pls~lGL~~ 1504 (1712)
|...++.---.++.+|...
T Consensus 279 Y~~~r~~~iA~lK~LGA~~ 297 (829)
T COG3127 279 YLDSRYDAIAILKCLGASR 297 (829)
T ss_pred HHcccccHHHHHHHhCCch
Confidence 3444444344466677653
No 342
>PRK09928 choline transport protein BetT; Provisional
Probab=25.51 E-value=3.6e+02 Score=36.61 Aligned_cols=15 Identities=27% Similarity=0.186 Sum_probs=11.4
Q ss_pred HHHHHhhHHHHHhhc
Q 000293 1581 LLFRSWLPEEIAADL 1595 (1712)
Q Consensus 1581 LLFRG~L~~~L~~~~ 1595 (1712)
+-.|..++..+.++.
T Consensus 174 l~issal~pllG~ri 188 (679)
T PRK09928 174 LTIRSALYPIFGKRI 188 (679)
T ss_pred CchhHhhhhhcCCCC
Confidence 667888888887553
No 343
>PLN02893 Cellulose synthase-like protein
Probab=25.09 E-value=8.2e+02 Score=33.69 Aligned_cols=16 Identities=19% Similarity=0.113 Sum_probs=9.0
Q ss_pred HHhhccccccchhHHHH
Q 000293 1402 LLWGGLRGAMSLTEKLI 1418 (1712)
Q Consensus 1402 ~~~~~~~~~~slt~~~~ 1418 (1712)
-||.|+|| +++-.||-
T Consensus 504 Pl~~g~~~-L~~~Qrl~ 519 (734)
T PLN02893 504 PITFGVKS-IGLLMGLG 519 (734)
T ss_pred chhhcccC-CCHHHHHH
Confidence 35666665 66655543
No 344
>COG4200 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=25.06 E-value=1.2e+03 Score=27.80 Aligned_cols=27 Identities=15% Similarity=0.123 Sum_probs=17.2
Q ss_pred hHHHHHhhc-CCchhhHHHHHHHhhhcC
Q 000293 1587 LPEEIAADL-DYHRGIIISGLAFALSQR 1613 (1712)
Q Consensus 1587 L~~~L~~~~-g~~~AiIISSLLFALlHl 1613 (1712)
++-+|.-++ +...|+.++-.+++++|.
T Consensus 155 lQ~wLsm~fknf~~al~igI~l~a~fva 182 (239)
T COG4200 155 LQFWLSMRFKNFAVALVIGIFLPALFVA 182 (239)
T ss_pred HHHHHHHHHHhhhHhHHHHHhHHHHHHH
Confidence 555565444 355677776666777777
No 345
>TIGR00930 2a30 K-Cl cotransporter.
Probab=24.83 E-value=2.2e+03 Score=30.65 Aligned_cols=23 Identities=9% Similarity=0.147 Sum_probs=14.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Q 000293 1510 VQNFLKGLIAGVMLVLLIQSLNA 1532 (1712)
Q Consensus 1510 ~r~ll~GLllGvllillv~li~~ 1532 (1712)
-|.+-.|+++++++.++++++..
T Consensus 310 ~r~IPratl~ai~i~~vlYllv~ 332 (953)
T TIGR00930 310 QKAIPKGTLLAILTTTVVYLGSV 332 (953)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHH
Confidence 45666777777666666654443
No 346
>COG4452 CreD Inner membrane protein involved in colicin E2 resistance [Defense mechanisms]
Probab=24.83 E-value=1.3e+03 Score=29.60 Aligned_cols=26 Identities=15% Similarity=0.135 Sum_probs=18.9
Q ss_pred hhhHHHHHHHHHHHHHhhHhheecCC
Q 000293 1147 EMESDLARDLERVATDISLAIVHDEE 1172 (1712)
Q Consensus 1147 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 1172 (1712)
.|=+.|-+|=-..++.|+.+|-.+..
T Consensus 25 ~li~~li~eRa~~r~~v~~~I~~s~s 50 (443)
T COG4452 25 LLIRGLIDERADYRSDVIDAIANSTS 50 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 45667777777888888888876644
No 347
>PF06626 DUF1152: Protein of unknown function (DUF1152); InterPro: IPR010581 This family consists of several hypothetical archaeal proteins of unknown function.
Probab=24.65 E-value=1e+02 Score=37.68 Aligned_cols=42 Identities=31% Similarity=0.521 Sum_probs=33.1
Q ss_pred hhhcccCCccccCCCCcchHHHHHHHHHhhcccCcchhhhhHHHHHhhccccccchhHHH
Q 000293 1358 KAMSVASPVVPTKEDGEVDQERLVAMLADLGQKGGLLKLVGKLALLWGGLRGAMSLTEKL 1417 (1712)
Q Consensus 1358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~slt~~~ 1417 (1712)
+-..|+||= -|||++++-+...+|++.++||+| |+.|||...
T Consensus 159 ~~l~v~G~G----~DgeL~~~~vl~riaeia~~GG~L--------------G~~~l~~~~ 200 (297)
T PF06626_consen 159 VILAVIGFG----VDGELSHDYVLERIAEIARKGGYL--------------GAFSLSRED 200 (297)
T ss_pred eEEEEEeCC----cCCCCCHHHHHHHHHHHHHcCCcc--------------ccccCCHHH
Confidence 334566664 489999999999999999998765 788888554
No 348
>COG1615 Uncharacterized conserved protein [Function unknown]
Probab=24.30 E-value=3.1e+02 Score=37.21 Aligned_cols=200 Identities=16% Similarity=0.073 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhh-hhhhccCCCCCchhhHHHHHHHHHHHHHHHHH--HHhheeecccCCcccccc------
Q 000293 1432 ILGFVGMVLVLWSPVLVPLLP-TIVQSWTTNNPSRIAEFACIVGLYIAVMILTM--KWGRRVRGYENSLEQYGL------ 1502 (1712)
Q Consensus 1432 IilFllmllllwlP~aI~l~p-~Ll~~~~~~~p~~i~~l~~lv~Lyla~lILli--lW~~~~~~~r~pls~lGL------ 1502 (1712)
++++.+.++++..|..+-.+- .+++.--.-.+.....+...+.+++.+.+++. +|...+....- ..+.+-
T Consensus 8 ~~ai~~l~ll~~~p~~vd~y~~~LWF~evgy~sVf~t~L~t~l~~~~~~~iiv~~~l~~~yr~~~~~-~~~~~~va~~r~ 86 (885)
T COG1615 8 MVAIGFLVLLLAGPRLVDAYVDWLWFGEVGYRSVFSTVLATRLVLFVVIFIIVGGGLALAYRSRPKF-VPDFDNVARYRA 86 (885)
T ss_pred hHHhhhhHhhccCccccceeechhhhcccCchhhHHHHHHHHHHHHHHHHHHhhcchheeeeeeeee-eccccchHHHHH
Q ss_pred ----cccCchhhHHHHHHHHHHHHHHHHHHHHHHHh--hcccccCCccccchhhHHHH-HHHhhhhHHHHHHHHHHHHHH
Q 000293 1503 ----DITSLPKVQNFLKGLIAGVMLVLLIQSLNAVL--GCVSFSWPSIVTSSLTAMAW-LKVYGNISMLACQGIVTATVV 1575 (1712)
Q Consensus 1503 ----~~~~~~~~r~ll~GLllGvllillv~li~~ll--G~i~~~~~~~~~sa~~p~~~-l~~~~~~~~lil~~llvallv 1575 (1712)
+.++...+..+..|+++|++.-.-.+-+++.+ +......+.+.. -..-..+ +..|-.+...++..+++++++
T Consensus 87 ~~~~~~r~v~~~i~~~i~~~agl~~s~yW~ri~lf~ng~~Fgv~DPqFg~-D~~FY~F~LPf~rlv~~~l~~~l~~a~~~ 165 (885)
T COG1615 87 MVLRRPRLVGIGIPVIIGLLAGLIASSYWVRIQLFLNGGDFGVSDPQFGL-DIGFYAFQLPFYRLVLSWLLVALLLAFLA 165 (885)
T ss_pred HHhhcchhhcccHHHHHHHHHHHHhhhhhheeeeeecCCCCCccCcccCc-ceeEEEEecHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHhhHHHHHhhcCCchhhHHHHHHHhhhcC------------------------------CcchHHHHHHHH
Q 000293 1576 VLVEELLFRSWLPEEIAADLDYHRGIIISGLAFALSQR------------------------------SPQAIPGLWLLS 1625 (1712)
Q Consensus 1576 gi~EELLFRG~L~~~L~~~~g~~~AiIISSLLFALlHl------------------------------tl~~~i~lfLlG 1625 (1712)
+ +==.+|+|.=+...+.-+....-+=.++++++++-+ .++.-+.+..++
T Consensus 166 ~-v~~Yif~~irlse~~~~ls~~A~~q~a~~~G~~vlL~av~ywL~Ryell~~~~g~~~GA~YTDI~~~lP~~~iL~aia 244 (885)
T COG1615 166 A-VTHYIFGGIRLSEFRGALSRSARVQLASLLGALVLLKAVAYWLDRYELLSREHGTFTGAGYTDINAQLPAKLILIAIA 244 (885)
T ss_pred H-HHHHHhhceeeccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCCcccccCceeeeeeccHHHHHHHHH
Q ss_pred HHHHHHHHh
Q 000293 1626 LALAGVRQR 1634 (1712)
Q Consensus 1626 LvLa~ay~r 1634 (1712)
++.+.+.+.
T Consensus 245 l~~aia~f~ 253 (885)
T COG1615 245 LLCAIAFFS 253 (885)
T ss_pred HHHHHHHHH
No 349
>PLN02189 cellulose synthase
Probab=24.27 E-value=8.6e+02 Score=34.66 Aligned_cols=27 Identities=33% Similarity=0.393 Sum_probs=17.2
Q ss_pred cccCcchhhhhHHHHHhhccccccchh
Q 000293 1388 GQKGGLLKLVGKLALLWGGLRGAMSLT 1414 (1712)
Q Consensus 1388 ~~~~~~~~~~~~~~~~~~~~~~~~slt 1414 (1712)
|.++|=|+|.=+++-++..+-.--|+-
T Consensus 800 g~~~~~L~l~QRL~Yl~~~ly~~~sip 826 (1040)
T PLN02189 800 GYKGGNLKWLERFAYVNTTIYPFTSLP 826 (1040)
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 333344778888887777666655554
No 350
>TIGR01185 devC DevC protein. This model describes a predicted membrane subunit, DevC, of an ABC transporter known so far from two species of cyanobacteria. Some experimental data from mutational analysis suggest that this protein along with DevA and DevB encoded in the same operon may be involved in the transport/export of glycolipids.
Probab=24.12 E-value=2.1e+02 Score=35.75 Aligned_cols=27 Identities=11% Similarity=0.094 Sum_probs=12.9
Q ss_pred CCcccccccccCchhhHHHHHHHHHHHH
Q 000293 1495 NSLEQYGLDITSLPKVQNFLKGLIAGVM 1522 (1712)
Q Consensus 1495 ~pls~lGL~~~~~~~~r~ll~GLllGvl 1522 (1712)
..++.+|.+... -...-+..+++++++
T Consensus 292 giLrAlGa~~~~-I~~~~l~Ea~ll~~i 318 (380)
T TIGR01185 292 ATLKAIGYTQKY-LLGVILQEALLLACL 318 (380)
T ss_pred HHHHHhCCCHHH-HHHHHHHHHHHHHHH
Confidence 446778876543 122223334444444
No 351
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=24.12 E-value=9.1e+02 Score=34.59 Aligned_cols=44 Identities=14% Similarity=0.027 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhcCCchhhHHHHHHHhhhcC
Q 000293 1569 IVTATVVVLVEELLFRSWLPEEIAADLDYHRGIIISGLAFALSQR 1613 (1712)
Q Consensus 1569 llvallvgi~EELLFRG~L~~~L~~~~g~~~AiIISSLLFALlHl 1613 (1712)
|+...+.++.| +++.|+=.+.+-+.-..|.---+||-+||+++.
T Consensus 898 fl~~~~~~llE-~~wsG~si~~WWrnQr~w~I~~tSa~lfavl~~ 941 (1079)
T PLN02638 898 FLSIFATGILE-MRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQG 941 (1079)
T ss_pred HHHHHHHHHHH-HHhccccHHHHhhhhhheehhhhHHHHHHHHHH
Confidence 33344446666 777787666554444567767778888888775
No 352
>COG2898 Uncharacterized conserved protein [Function unknown]
Probab=23.97 E-value=1.3e+03 Score=30.78 Aligned_cols=26 Identities=12% Similarity=0.046 Sum_probs=19.4
Q ss_pred ccceeecCCCCceeecCCCCCcchhH
Q 000293 1659 GGLLTYKPSLPLWITGTHPFQPFSGV 1684 (1712)
Q Consensus 1659 ~Gll~~t~~gp~wLTGg~~fgPe~Gv 1684 (1712)
.+++.|...+-.|+.=|.+.|++..-
T Consensus 246 ~AfimY~~~~~s~ialGDPvG~~~~~ 271 (538)
T COG2898 246 RAFIMYRVKGGSLIALGDPVGDEEAW 271 (538)
T ss_pred CEEEEEeeeccEEEEecCCCCChhHh
Confidence 45788888899999888766666443
No 353
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=23.62 E-value=6.4e+02 Score=35.45 Aligned_cols=15 Identities=27% Similarity=0.370 Sum_probs=9.3
Q ss_pred CCccccCCCCcchHH
Q 000293 1364 SPVVPTKEDGEVDQE 1378 (1712)
Q Consensus 1364 ~~~~~~~~~~~~~~~ 1378 (1712)
|=+|-.-|||.-|-.
T Consensus 630 g~~va~iGDG~ND~~ 644 (917)
T TIGR01116 630 GEIVAMTGDGVNDAP 644 (917)
T ss_pred CCeEEEecCCcchHH
Confidence 556655677776654
No 354
>PF06899 WzyE: WzyE protein; InterPro: IPR010691 This family consists of several WzyE proteins, which appear to be specific to Enterobacteria. Members of this family are described as putative ECA polymerases this has been found to be incorrect []. The function of this family is unknown.; GO: 0016021 integral to membrane
Probab=23.48 E-value=9.5e+02 Score=30.88 Aligned_cols=38 Identities=16% Similarity=0.093 Sum_probs=26.1
Q ss_pred CchhhHHHHHHHhhhcCCc---------chHHHHHHHHHHHHHHHHh
Q 000293 1597 YHRGIIISGLAFALSQRSP---------QAIPGLWLLSLALAGVRQR 1634 (1712)
Q Consensus 1597 ~~~AiIISSLLFALlHltl---------~~~i~lfLlGLvLa~ay~r 1634 (1712)
.|...++..+.||+++.-. .++...+++|+.-+|.-.+
T Consensus 180 ~wi~fLi~~v~FGlltYviVGGTRanl~~A~~lflfiGi~rg~is~k 226 (448)
T PF06899_consen 180 SWILFLISTVAFGLLTYVIVGGTRANLIIAFALFLFIGIYRGWISLK 226 (448)
T ss_pred HHHHHHHHHHHHhhheeeEEcCcHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 4899999999999999821 2344444566666665443
No 355
>COG3125 CyoD Heme/copper-type cytochrome/quinol oxidase, subunit 4 [Energy production and conversion]
Probab=23.24 E-value=8.6e+02 Score=25.99 Aligned_cols=24 Identities=25% Similarity=0.433 Sum_probs=21.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhh
Q 000293 1428 LLQRILGFVGMVLVLWSPVLVPLL 1451 (1712)
Q Consensus 1428 ~~~rIilFllmllllwlP~aI~l~ 1451 (1712)
.+.-+++|++.+++..+||.....
T Consensus 17 ~k~y~iGFvLsIiLT~ipF~~vm~ 40 (111)
T COG3125 17 LKSYLIGFVLSIILTLIPFWVVMT 40 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 667789999999999999998766
No 356
>PRK02509 hypothetical protein; Provisional
Probab=23.02 E-value=2.4e+03 Score=30.40 Aligned_cols=32 Identities=25% Similarity=0.325 Sum_probs=15.8
Q ss_pred hhHHHHHHHHHHHHHHHHHH-HHHHHhhccccc
Q 000293 1509 KVQNFLKGLIAGVMLVLLIQ-SLNAVLGCVSFS 1540 (1712)
Q Consensus 1509 ~~r~ll~GLllGvllillv~-li~~llG~i~~~ 1540 (1712)
.+..++.+++++++++.++. ++.++++...+.
T Consensus 238 Pf~~~l~~~l~~~~~~~li~~~~~Yl~~~~~l~ 270 (973)
T PRK02509 238 PLWELLEFWLMGLFLYGFIAVTLTYLLSADSLS 270 (973)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 34555666666554444433 333555555443
No 357
>PRK11281 hypothetical protein; Provisional
Probab=22.94 E-value=5.6e+02 Score=36.85 Aligned_cols=48 Identities=13% Similarity=0.121 Sum_probs=33.0
Q ss_pred CCCcchHHHHHHHHHhhcccCcchhhhhHHHHHhhccccccchhHHHH
Q 000293 1371 EDGEVDQERLVAMLADLGQKGGLLKLVGKLALLWGGLRGAMSLTEKLI 1418 (1712)
Q Consensus 1371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~slt~~~~ 1418 (1712)
|+-.+|-|++.+-+-.|-.--.++-+++=+-.+|+-+-.+.+.||-.-
T Consensus 770 ee~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~~~l~~i~ 817 (1113)
T PRK11281 770 EEPTLALEQVNQQSLRLTDLLLFALFFVMFYWVWSDLITVFSYLDSIT 817 (1113)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 445799999988777665544444455556668888888888877433
No 358
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form. This model is specific for the bacterial members of this family.
Probab=22.64 E-value=63 Score=42.10 Aligned_cols=22 Identities=41% Similarity=0.623 Sum_probs=17.5
Q ss_pred hhhHHHHHhhccccccchhHHH
Q 000293 1396 LVGKLALLWGGLRGAMSLTEKL 1417 (1712)
Q Consensus 1396 ~~~~~~~~~~~~~~~~slt~~~ 1417 (1712)
.-.++.+-|+|+||++||.=-+
T Consensus 342 ~r~~~v~~w~G~RG~vslA~al 363 (525)
T TIGR00831 342 TRWKHVVSWAGLRGAIPLALAL 363 (525)
T ss_pred hhhHHHheeccchHHHHHHHHH
Confidence 3466789999999999996443
No 359
>PF03839 Sec62: Translocation protein Sec62; InterPro: IPR004728 Members of the NSCC2 family have been sequenced from various yeast, fungal and animals species including Saccharomyces cerevisiae, Drosophila melanogaster and Homo sapiens. These proteins are the Sec62 proteins, believed to be associated with the Sec61 and Sec63 constituents of the general protein secretary systems of yeast microsomes. They are also the non-selective cation (NS) channels of the mammalian cytoplasmic membrane. The yeast Sec62 protein has been shown to be essential for cell growth. The mammalian NS channel proteins have been implicated in platelet derived growth factor(PGDF) dependent single channel current in fibroblasts. These channels are essentially closed in serum deprived tissue-culture cells and are specifically opened by exposure to PDGF. These channels are reported to exhibit equal selectivity for Na+, K+ and Cs+ with low permeability to Ca2+, and no permeability to anions.; GO: 0008565 protein transporter activity, 0015031 protein transport, 0016021 integral to membrane
Probab=22.26 E-value=2.4e+02 Score=33.23 Aligned_cols=26 Identities=38% Similarity=0.660 Sum_probs=12.6
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHhhhh
Q 000293 1426 RPLLQRILGFVGMVLVLWSPVLVPLLP 1452 (1712)
Q Consensus 1426 ~P~~~rIilFllmllllwlP~aI~l~p 1452 (1712)
.|.+..+++++++++++ .-+.+++.|
T Consensus 107 ~~~~~~l~~~~~~~~v~-a~~lFPlWP 132 (224)
T PF03839_consen 107 SPLMQYLIGALLLVGVI-AICLFPLWP 132 (224)
T ss_pred CcHHHHHHHHHHHHHHH-HHHhhhcCh
Confidence 34455555444444443 444455555
No 360
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=22.19 E-value=2.4e+02 Score=34.99 Aligned_cols=96 Identities=18% Similarity=0.133 Sum_probs=60.1
Q ss_pred CCCcEEEEeCCCCCCChhHH--HHHHHHHHH---------hCCcEEEEEcC-CCCCCCCCCCCCCcccCc---HHHHHHH
Q 000293 214 GLDTTLLLVPGTAEGSIEKR--IRLFVCEAL---------RRGFFPVVMNP-RGCGGSPLTTSRLFTAAD---SDDICTA 278 (1712)
Q Consensus 214 ~~~PtVVLLHGltGGS~~sY--ir~La~~Ll---------q~GYrVVVfD~-RGhGgS~ltsprly~a~~---tdDL~aV 278 (1712)
..+|..+-+.|.+|+|...| +..+.+.-. -+--.++.+|. -|.|-|-......|.... ..|+.+.
T Consensus 29 s~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~l 108 (414)
T KOG1283|consen 29 SERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVEL 108 (414)
T ss_pred cCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecCCCcCceeeecCcccccccHHHHHHHHHHH
Confidence 45788999999888776553 222211000 01124445554 588888544445555433 3688888
Q ss_pred HHHHHhhCC---CCcEEEEEecHHHHHHHHHHHH
Q 000293 279 IQFIGKARP---WTTLMSVGWGYGANMLTKYLAE 309 (1712)
Q Consensus 279 Ld~I~kryP---~spLvLVGhSMGG~IaL~YLge 309 (1712)
++.+-..+| ..|++++-.|+||-++..++.+
T Consensus 109 lk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~ 142 (414)
T KOG1283|consen 109 LKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALE 142 (414)
T ss_pred HHHHHhcCccccccceEEEEhhcccchhhhhhhh
Confidence 876654444 6799999999999988776644
No 361
>KOG3817 consensus Uncharacterized conserved protein [Function unknown]
Probab=22.06 E-value=7.4e+02 Score=31.24 Aligned_cols=16 Identities=25% Similarity=0.090 Sum_probs=12.4
Q ss_pred hhHHHHHHHhhhcCCc
Q 000293 1600 GIIISGLAFALSQRSP 1615 (1712)
Q Consensus 1600 AiIISSLLFALlHltl 1615 (1712)
|+||-.++|..+|..+
T Consensus 280 A~iI~~lc~~~l~~pI 295 (452)
T KOG3817|consen 280 AAIIMVLCFVALYFPI 295 (452)
T ss_pred HHHHHHHHHHHHhccH
Confidence 7788888888888643
No 362
>PRK09824 PTS system beta-glucoside-specific transporter subunits IIABC; Provisional
Probab=21.99 E-value=1.7e+03 Score=30.26 Aligned_cols=28 Identities=18% Similarity=0.285 Sum_probs=17.6
Q ss_pred HHHHHHHHhhHHHHHhhcCCchhhHHHH
Q 000293 1578 VEELLFRSWLPEEIAADLDYHRGIIISG 1605 (1712)
Q Consensus 1578 ~EELLFRG~L~~~L~~~~g~~~AiIISS 1605 (1712)
.=|-++|=++...++--+-+...++++.
T Consensus 231 ~iEk~l~K~iP~~l~~i~~P~ltlli~~ 258 (627)
T PRK09824 231 ILERRLNAWLPSAIKNFFTPLLCLMVIV 258 (627)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667777777766666665555554
No 363
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=21.88 E-value=6.3e+02 Score=28.99 Aligned_cols=14 Identities=14% Similarity=0.014 Sum_probs=5.8
Q ss_pred chHHHHHHHHHHHH
Q 000293 1616 QAIPGLWLLSLALA 1629 (1712)
Q Consensus 1616 ~~~i~lfLlGLvLa 1629 (1712)
+.++.+.+..++++
T Consensus 179 ~~~~~iiig~i~~~ 192 (206)
T PF06570_consen 179 PPWVYIIIGVIAFA 192 (206)
T ss_pred CHHHHHHHHHHHHH
Confidence 34444443333333
No 364
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=21.75 E-value=2e+02 Score=34.46 Aligned_cols=36 Identities=22% Similarity=0.133 Sum_probs=22.8
Q ss_pred cCCcchHHHHHHHHHHHHHHHHhcCCcchHHHHHHhHH
Q 000293 1612 QRSPQAIPGLWLLSLALAGVRQRSQGSLSVPIGLRTGI 1649 (1712)
Q Consensus 1612 Hltl~~~i~lfLlGLvLa~ay~rttGSLWlpIGLHagW 1649 (1712)
|..++.++.+++++++++++..+ |.-|..||+=+..
T Consensus 21 ~~~~l~~~~~~~~~F~~~ml~~~--G~r~~~i~~~~Ll 56 (284)
T PF12805_consen 21 PYPWLLILVLALLTFFFGMLGVY--GPRAATIGFATLL 56 (284)
T ss_pred hccHHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHH
Confidence 33556666666677777766665 5677777765433
No 365
>PF07185 DUF1404: Protein of unknown function (DUF1404); InterPro: IPR009844 This family consists of several archaeal proteins of around 180 residues in length. Members of this family seem to be found exclusively in Sulfolobus tokodaii and Sulfolobus solfataricus. The function of this family is unknown.
Probab=21.67 E-value=2.4e+02 Score=31.93 Aligned_cols=66 Identities=12% Similarity=-0.061 Sum_probs=43.8
Q ss_pred HHhhHHHHHhhcCCchhhHHHHHHHhhhcCCc-------------chHHHHHHHHHHHHHHHHhcCCcchHHHHHHhHHh
Q 000293 1584 RSWLPEEIAADLDYHRGIIISGLAFALSQRSP-------------QAIPGLWLLSLALAGVRQRSQGSLSVPIGLRTGIM 1650 (1712)
Q Consensus 1584 RG~L~~~L~~~~g~~~AiIISSLLFALlHltl-------------~~~i~lfLlGLvLa~ay~rttGSLWlpIGLHagWn 1650 (1712)
-|.+....-.+.+ +..+++.+++=.++|+.. ...+.+++.|++.|..... -+.+.-+.+-+.|+
T Consensus 36 ~g~llgy~~~k~~-~~~~i~g~~~~v~WhlP~~F~l~a~~~~~Rii~elSl~lgGiL~Gss~~~--m~~~~Ki~Lf~lwM 112 (169)
T PF07185_consen 36 GGFLLGYKLFKGK-IIFLILGIIPAVFWHLPYFFDLSASSLWYRIIDELSLFLGGILIGSSIPS--MSFVFKITLFALWM 112 (169)
T ss_pred HHHHHHHHHhccc-chhhhhhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH--HHHHHHHHHHHHHH
Confidence 3555555444444 345778888889999932 3456667777777665544 35777788999998
Q ss_pred hh
Q 000293 1651 AS 1652 (1712)
Q Consensus 1651 ~~ 1652 (1712)
++
T Consensus 113 ~g 114 (169)
T PF07185_consen 113 IG 114 (169)
T ss_pred HH
Confidence 64
No 366
>PF14184 YrvL: Regulatory protein YrvL
Probab=21.65 E-value=5.5e+02 Score=27.96 Aligned_cols=37 Identities=16% Similarity=0.055 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhcCCchhhHHHH
Q 000293 1569 IVTATVVVLVEELLFRSWLPEEIAADLDYHRGIIISG 1605 (1712)
Q Consensus 1569 llvallvgi~EELLFRG~L~~~L~~~~g~~~AiIISS 1605 (1712)
++++++.++.=|++++..+......+.+.|.+.+.-.
T Consensus 46 ~li~~~lg~~~e~~~k~l~~~l~~~~~~~~~~~~l~~ 82 (132)
T PF14184_consen 46 FLIIFVLGLPFELFEKVLLKALLFLRMSRRLFILLAF 82 (132)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCchHHHHHHHH
Confidence 3445556888899999999888777788888777666
No 367
>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system []. Some members of this family have been annotated as putative ABC transporter permease proteins.
Probab=21.62 E-value=1.4e+03 Score=31.37 Aligned_cols=11 Identities=18% Similarity=0.392 Sum_probs=5.8
Q ss_pred HHHHHHHHhhh
Q 000293 1441 VLWSPVLVPLL 1451 (1712)
Q Consensus 1441 llwlP~aI~l~ 1451 (1712)
++|+|+++..+
T Consensus 149 ~i~lPL~llgi 159 (843)
T PF09586_consen 149 MILLPLLLLGI 159 (843)
T ss_pred HHHHHHHHHHH
Confidence 44556655544
No 368
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=21.51 E-value=70 Score=42.00 Aligned_cols=53 Identities=11% Similarity=0.151 Sum_probs=33.3
Q ss_pred HHHHHHHHhh-CC-CCcEEEEEecHHHHHHHHHHHHc-----CC----CCCccEEEEecCCCCh
Q 000293 276 CTAIQFIGKA-RP-WTTLMSVGWGYGANMLTKYLAEV-----GE----RTPLTAVTCIDNPFDL 328 (1712)
Q Consensus 276 ~aVLd~I~kr-yP-~spLvLVGhSMGG~IaL~YLge~-----ge----~s~V~AaVlIS~P~Dl 328 (1712)
..+++.+.+. .+ .+|++-+||||||.++=..+-.- |+ ..+-.|++.++.|...
T Consensus 511 ~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHrG 574 (697)
T KOG2029|consen 511 NELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHRG 574 (697)
T ss_pred HHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCCC
Confidence 3555555433 23 57999999999997765555331 11 1246678888888644
No 369
>PLN00151 potassium transporter; Provisional
Probab=21.30 E-value=1.5e+03 Score=31.74 Aligned_cols=36 Identities=14% Similarity=0.113 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHhhHHHHHhhcCCchhhHHHHHHHhhhcC
Q 000293 1575 VVLVEELLFRSWLPEEIAADLDYHRGIIISGLAFALSQR 1613 (1712)
Q Consensus 1575 vgi~EELLFRG~L~~~L~~~~g~~~AiIISSLLFALlHl 1613 (1712)
.++.|=++|=.-++.. .-|-|+.+++++++|.++-.
T Consensus 536 F~~ie~~f~sA~l~Ki---~~GGW~Pl~la~v~~~iM~~ 571 (852)
T PLN00151 536 FLSVELVFFSSVLSSV---GDGGWIPLVFASVFLCIMYI 571 (852)
T ss_pred HHHHHHHHHHHHHHhh---cCCCcHHHHHHHHHHHHHHH
Confidence 3555555554444432 34679999999999988754
No 370
>TIGR02711 symport_actP cation/acetate symporter ActP. Members of this family belong to the Sodium:solute symporter family. Both members of this family and other close homologs tend to be encoded next to a member of Pfam family pfam04341, a set of uncharacterized membrane proteins. The characterized member from E. coli is encoded near and cotranscribed with the acetyl coenzyme A synthetase (acs) gene. Proximity to an acs gene was used as one criterion for determining the trusted cutoff for this model. Closely related proteins may differ in function and are excluded by the high cutoffs of this model; members of the family of phenylacetic acid transporter PhaJ can score as high as 1011 bits.
Probab=21.23 E-value=2e+03 Score=28.79 Aligned_cols=33 Identities=12% Similarity=0.234 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHhheeecccCCcccccccccC
Q 000293 1471 CIVGLYIAVMILTMKWGRRVRGYENSLEQYGLDITS 1506 (1712)
Q Consensus 1471 ~lv~Lyla~lILlilW~~~~~~~r~pls~lGL~~~~ 1506 (1712)
.++.+|+.+++.+.+|..|+. +..++|-+..++
T Consensus 36 ~~~~~y~~~~l~ig~~~~r~~---~~~~dy~laGr~ 68 (549)
T TIGR02711 36 IMFLLFVGFTLYITYWASKKT---RSRSDYYTAGGN 68 (549)
T ss_pred HHHHHHHHHHHHHHHHhhccc---CCchhheeeCCC
Confidence 345666666666777776542 224566655443
No 371
>TIGR03480 HpnN hopanoid biosynthesis associated RND transporter like protein HpnN. The genomes containing members of this family share the machinery for the biosynthesis of hopanoid lipids. Furthermore, the genes of this family are usually located proximal to other components of this biological process. The proteins appear to be related to the RND family of export proteins, particularly the hydrophobe/amphiphile efflux-3 (HAE3) family represented by TIGR00921.
Probab=21.19 E-value=1.6e+03 Score=31.27 Aligned_cols=13 Identities=8% Similarity=-0.284 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHHH
Q 000293 1620 GLWLLSLALAGVR 1632 (1712)
Q Consensus 1620 ~lfLlGLvLa~ay 1632 (1712)
....+|++++++.
T Consensus 399 ~~~~~gv~~s~l~ 411 (862)
T TIGR03480 399 IIAGTGMFIALFV 411 (862)
T ss_pred HHHHHHHHHHHHH
Confidence 3344555555543
No 372
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=21.17 E-value=1.6e+03 Score=30.32 Aligned_cols=15 Identities=13% Similarity=0.508 Sum_probs=9.5
Q ss_pred chhhhhHHHHHhhcc
Q 000293 1393 LLKLVGKLALLWGGL 1407 (1712)
Q Consensus 1393 ~~~~~~~~~~~~~~~ 1407 (1712)
=-|...=+...|.++
T Consensus 194 ~WRw~~~~~~i~~~i 208 (599)
T PF06609_consen 194 GWRWIFYIFIIWSGI 208 (599)
T ss_pred CcchHHHHHHHHHHH
Confidence 357766666666665
No 373
>PF12270 Cyt_c_ox_IV: Cytochrome c oxidase subunit IV; InterPro: IPR021050 This family of proteins is found in bacteria. Proteins in this family are approximately 140 amino acids in length. This family is the fourth subunit of the cytochrome c oxidase complex. This subunit does not have a catalytic capacity but instead, is required for assembly and/or stability of the complex []. ; GO: 0004129 cytochrome-c oxidase activity, 0055114 oxidation-reduction process, 0016021 integral to membrane
Probab=21.17 E-value=1.1e+03 Score=25.99 Aligned_cols=54 Identities=13% Similarity=-0.073 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHhheeecccCCc-----------ccccccccCchhhHHHHHHHHHHHHHHHHHH
Q 000293 1473 VGLYIAVMILTMKWGRRVRGYENSL-----------EQYGLDITSLPKVQNFLKGLIAGVMLVLLIQ 1528 (1712)
Q Consensus 1473 v~Lyla~lILlilW~~~~~~~r~pl-----------s~lGL~~~~~~~~r~ll~GLllGvllillv~ 1528 (1712)
+...+++++-..+++..|+.+.+|= .++|+=.+. .+..+..+++.+++.+.+++
T Consensus 43 ls~~l~~mig~yl~~~~rr~~~rPED~~daEI~dgAGe~GfFsP~--SwWPl~la~~~al~~lGla~ 107 (137)
T PF12270_consen 43 LSGGLALMIGFYLRFTARRIGPRPEDREDAEIADGAGELGFFSPH--SWWPLVLAAAAALVFLGLAF 107 (137)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCCccccccccccCCCCcCcCCCc--cHhHHHHHHHHHHHHHHHHH
Confidence 3334445555666665555443331 246654333 45555555555555544443
No 374
>CHL00182 tatC Sec-independent translocase component C; Provisional
Probab=21.14 E-value=1.5e+03 Score=27.19 Aligned_cols=63 Identities=14% Similarity=0.078 Sum_probs=35.6
Q ss_pred HHHHHHHHHH-HhhHHHHHhhcCCchhhHHHHHHHhhhcCCc-chHHHHHHHHHHHHHHHHhcCCcchHHH
Q 000293 1575 VVLVEELLFR-SWLPEEIAADLDYHRGIIISGLAFALSQRSP-QAIPGLWLLSLALAGVRQRSQGSLSVPI 1643 (1712)
Q Consensus 1575 vgi~EELLFR-G~L~~~L~~~~g~~~AiIISSLLFALlHltl-~~~i~lfLlGLvLa~ay~rttGSLWlpI 1643 (1712)
.|+.==++.| |.+-...-+++ +..++ +..+++|.+- +. +-.+.-+++++-+...|+- ++|.+.
T Consensus 181 lPvi~~~L~~~givs~~~L~~~-Rr~~~-v~~~i~aAii-TP~pD~~sqi~laiPl~lLYEi---sI~i~~ 245 (249)
T CHL00182 181 IPIIQIVLGLLNIISSKQMLSA-WRYVI-LVSTIVGAIL-TPSTDPLTQLLLSLAILLLYFS---GVIVLK 245 (249)
T ss_pred HHHHHHHHHHcCCcCHHHHHhh-CchHh-HHHHHHHHHh-CCCCcHHHHHHHHHHHHHHHHH---HHHHHH
Confidence 4555445555 44433322222 22233 3366666664 44 5777888888888888876 476654
No 375
>PF11654 DUF2665: Protein of unknown function (DUF2665); InterPro: IPR024242 This entry represents the non classical export protein 1 family. Family members are Involved in a novel pathway of export of proteins that lack a cleavable signal sequence [].; GO: 0009306 protein secretion
Probab=21.11 E-value=57 Score=29.51 Aligned_cols=26 Identities=23% Similarity=0.363 Sum_probs=20.8
Q ss_pred hhhhhhhHHHHHHHhhhhhc-ccCCCC
Q 000293 78 DALGPALGLFSGLALYASRF-SPIKPD 103 (1712)
Q Consensus 78 ~~~~~~~~~~~~~~~y~~~~-~~~kp~ 103 (1712)
..+=|++|+++|.+.||+.+ +..+|+
T Consensus 5 r~lDP~~av~iG~~ayyl~e~R~~rp~ 31 (47)
T PF11654_consen 5 RFLDPLFAVFIGTSAYYLYENREGRPE 31 (47)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhccCCC
Confidence 34568999999999999976 677774
No 376
>PRK12933 secD preprotein translocase subunit SecD; Reviewed
Probab=21.09 E-value=2.2e+03 Score=29.20 Aligned_cols=13 Identities=38% Similarity=0.547 Sum_probs=8.5
Q ss_pred CCCCCcchhhccc
Q 000293 1055 PLDLDTTTTLFLD 1067 (1712)
Q Consensus 1055 ~~~~~~~~~~~~d 1067 (1712)
-|||.--.-++|+
T Consensus 129 GLDLrGG~h~lle 141 (604)
T PRK12933 129 GLDLRGGVQFLLD 141 (604)
T ss_pred CeecCcccEEEEE
Confidence 5677666666665
No 377
>KOG3599 consensus Ca2+-modulated nonselective cation channel polycystin [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=20.85 E-value=9.8e+02 Score=33.36 Aligned_cols=53 Identities=8% Similarity=-0.157 Sum_probs=22.7
Q ss_pred chhhHHHHHHHhhhcCCcchH--HHHHHHHHHHHHHHHhcCCcchHHHHHHhHHh
Q 000293 1598 HRGIIISGLAFALSQRSPQAI--PGLWLLSLALAGVRQRSQGSLSVPIGLRTGIM 1650 (1712)
Q Consensus 1598 ~~AiIISSLLFALlHltl~~~--i~lfLlGLvLa~ay~rttGSLWlpIGLHagWn 1650 (1712)
...+.+.+.+|.+.=+-+.-| +.....+-+-.-.....++.+-+-=-++-.|+
T Consensus 651 LG~~~~~~~v~~v~~illnmF~aiI~~~~~evk~~~~~~~~~~~~l~~~l~~~~~ 705 (798)
T KOG3599|consen 651 LGPLLFLTYVFVVSFILLNLFVAIINDTYGEVKADLAKERSSEVELIDFLLYKYN 705 (798)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhHHHhhccccchhHHHHHHHHHH
Confidence 334555555555555533222 23334444444444411223333334444554
No 378
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=20.80 E-value=1.8e+02 Score=33.41 Aligned_cols=40 Identities=8% Similarity=0.208 Sum_probs=30.3
Q ss_pred CCCcEEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcC
Q 000293 214 GLDTTLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNP 253 (1712)
Q Consensus 214 ~~~PtVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~ 253 (1712)
+.++.+|.+-|+.|...+.--..+...|.+.||+|+++|-
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 3467899999997644444445567789999999999983
No 379
>PF11085 YqhR: Conserved membrane protein YqhR; InterPro: IPR024563 This family of proteins is conserved in the Bacillaceae family of the Firmicutes. Their function is not known.
Probab=20.70 E-value=6.4e+02 Score=28.80 Aligned_cols=99 Identities=10% Similarity=0.058 Sum_probs=0.0
Q ss_pred HHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHhhhh---------hhhhccCCCC---CchhhHHHHHHHHHHHHHHH
Q 000293 1415 EKLILFLHLADRPLLQRILGFVGMVLVLWSPVLVPLLP---------TIVQSWTTNN---PSRIAEFACIVGLYIAVMIL 1482 (1712)
Q Consensus 1415 ~~~~~~~~~~~~P~~~rIilFllmllllwlP~aI~l~p---------~Ll~~~~~~~---p~~i~~l~~lv~Lyla~lIL 1482 (1712)
.|+=+..+-.+.+.+.+++..-+.-.++|..+.+..+. .++.+|.... .-....+..++...++++..
T Consensus 6 ~~~eq~~~~~~~s~~~~~~~iGf~gGliWs~v~yl~y~f~FT~v~P~~ll~Pf~~g~wk~t~~G~~igi~~~gv~Si~aA 85 (173)
T PF11085_consen 6 ERLEQNQREKPMSFLAKVLEIGFFGGLIWSLVRYLAYFFHFTEVGPNFLLEPFALGDWKNTWLGNLIGIVFIGVFSIVAA 85 (173)
T ss_pred hhhhhcccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccChhhhhhhccchhhhhHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHhheeecccCCcccccccccCchhhHHHHHHHHHHHHHHHHHHHHH
Q 000293 1483 TMKWGRRVRGYENSLEQYGLDITSLPKVQNFLKGLIAGVMLVLLIQSLN 1531 (1712)
Q Consensus 1483 lilW~~~~~~~r~pls~lGL~~~~~~~~r~ll~GLllGvllillv~li~ 1531 (1712)
++++... ++.+....|++-|+++.++++.+.
T Consensus 86 llY~~~l------------------~k~~g~W~Gi~YG~~~W~ivF~~l 116 (173)
T PF11085_consen 86 LLYYALL------------------KKFKGPWPGILYGLAWWAIVFFVL 116 (173)
T ss_pred HHHHHHH------------------HHhcccchHHHHHHHHHHHHHHHh
No 380
>PRK01024 Na(+)-translocating NADH-quinone reductase subunit B; Provisional
Probab=20.32 E-value=8.2e+02 Score=32.02 Aligned_cols=188 Identities=16% Similarity=0.189 Sum_probs=0.0
Q ss_pred hhhhhhcccchhhHHHHHhhhcc-----cCCccccCCCCcchHHHHHHHHHhhcccCcchhhhhHHHHHhhccccccchh
Q 000293 1340 EKLISEKNQDNIVTSLAEKAMSV-----ASPVVPTKEDGEVDQERLVAMLADLGQKGGLLKLVGKLALLWGGLRGAMSLT 1414 (1712)
Q Consensus 1340 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~slt 1414 (1712)
+|+.+|.-|+.+-++|||..... .++--=|.-|-++-+--.-.|+ +|..+|-+--.-.+|+|-|||
T Consensus 301 ~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~s~~~~f--~G~~~GsiGEtS~la~LlGgi------- 371 (503)
T PRK01024 301 DQLTLEQLQNFVTTPLAEGGLGLLPTQFDSAYSITDVIYGIGKFSTGNLF--FGNILGSLGETSTFACLLGAI------- 371 (503)
T ss_pred cchhhhhhhhcccccccccccccccccccccccccccccccccccHHHHh--cCCCCCchhHHHHHHHHHHHH-------
Q ss_pred HHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHh----------hhhhhhhccCCCCCchhhHHHHHHHHHHHHHHHHH
Q 000293 1415 EKLILFLHLADRPLLQRILGFVGMVLVLWSPVLVP----------LLPTIVQSWTTNNPSRIAEFACIVGLYIAVMILTM 1484 (1712)
Q Consensus 1415 ~~~~~~~~~~~~P~~~rIilFllmllllwlP~aI~----------l~p~Ll~~~~~~~p~~i~~l~~lv~Lyla~lILli 1484 (1712)
++.+.+.-.|.-.+.|++.++++-..+-+. .-| ...+..-..-++.-++.+.++++..
T Consensus 372 -----~Li~t~iisWripvs~l~g~~~~a~lf~~~~~~~~g~~g~~~p-------~~~~~~~~~HLlsGGlmfGAfFMAT 439 (503)
T PRK01024 372 -----FLILTGIASWRTMLSFGLGAFFTAWLFKIMSILIVGNAGAWAP-------AKFFIPAYRHLFLGGLAFGLVFMAT 439 (503)
T ss_pred -----HHHHhceeeEEehHHHHHHHHHHHHHHHHhhhccccccccCCc-------ccccccHHHHHHHHHHHHHHHhhhc
Q ss_pred HHhheeecccCCcccccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCccccchhhHHHHHHHhhhhHHH
Q 000293 1485 KWGRRVRGYENSLEQYGLDITSLPKVQNFLKGLIAGVMLVLLIQSLNAVLGCVSFSWPSIVTSSLTAMAWLKVYGNISML 1564 (1712)
Q Consensus 1485 lW~~~~~~~r~pls~lGL~~~~~~~~r~ll~GLllGvllillv~li~~llG~i~~~~~~~~~sa~~p~~~l~~~~~~~~l 1564 (1712)
.|..+ .. ...-.+..|+++|++.+++ ..-++.++. -+
T Consensus 440 ----------DPVTS-----P~-T~~GK~IYGigiGvLTvlI-----------R~fgp~YPE----------------GV 476 (503)
T PRK01024 440 ----------DPVSS-----PT-MKLAKWIYGAFIGFMTIVI-----------RLINPAYPE----------------GV 476 (503)
T ss_pred ----------CCCCC-----CC-CCchHhHHHHHHHHHhhhh-----------hhcCCCCch----------------HH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 000293 1565 ACQGIVTATVVVLVEELLFRSWLPEEI 1591 (1712)
Q Consensus 1565 il~~llvallvgi~EELLFRG~L~~~L 1591 (1712)
.+.++++-+++|+.+-..-|....+++
T Consensus 477 ~FAILLmN~~~PLiD~~~v~~~~krR~ 503 (503)
T PRK01024 477 MLAILLGNVFAPLFDYFAVRKYRQRRI 503 (503)
T ss_pred HHHHHHHhhhhhhHHHHHhHhhhhccC
No 381
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=20.20 E-value=4.4e+02 Score=30.96 Aligned_cols=38 Identities=18% Similarity=0.335 Sum_probs=28.5
Q ss_pred EEEEeCCCCCCChhHHHHHHHHHHHhCCcEEEEEcCCC
Q 000293 218 TLLLVPGTAEGSIEKRIRLFVCEALRRGFFPVVMNPRG 255 (1712)
Q Consensus 218 tVVLLHGltGGS~~sYir~La~~Llq~GYrVVVfD~RG 255 (1712)
.+++++|+..|....+...++..|.++|+.|.++...+
T Consensus 2 il~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 39 (360)
T cd04951 2 ILYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTG 39 (360)
T ss_pred eEEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeC
Confidence 45666776545666778889999999999988886544
No 382
>TIGR01912 TatC-Arch Twin arginine targeting (Tat) protein translocase TatC, Archaeal clade. This model represents the TatC translocase component of the Sec-independent protein translocation system. This system is responsible for translocation of folded proteins, often with bound cofactors across the periplasmic membrane. A related model (TIGR00945) represents the bacterial clade of this family. TatC is often found (in bacteria) in a gene cluster with the two other components of the system, TatA/E (TIGR01411) and TatB (TIGR01410). A model also exists for the Twin-arginine signal sequence (TIGR01409).
Probab=20.15 E-value=1.5e+03 Score=26.88 Aligned_cols=70 Identities=21% Similarity=0.227 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHH-HhhHHHHHhhcCCchhhHHHHHHHhhhcCCcchHHHHHHHHHHHHHHHHhcCCcchHHH
Q 000293 1569 IVTATVVVLVEELLFR-SWLPEEIAADLDYHRGIIISGLAFALSQRSPQAIPGLWLLSLALAGVRQRSQGSLSVPI 1643 (1712)
Q Consensus 1569 llvallvgi~EELLFR-G~L~~~L~~~~g~~~AiIISSLLFALlHltl~~~i~lfLlGLvLa~ay~rttGSLWlpI 1643 (1712)
+.+++-.|+.==++.| |.+....-++ .|.-+++..+++|.+-..-+-.+..+++++-+..+|+- +++.+.
T Consensus 163 fGl~FelPvv~~~L~~~giv~~~~l~~--~rr~~~v~~~i~aAiiTP~pD~~sq~~laiPl~~LYei---si~i~~ 233 (237)
T TIGR01912 163 FGLAFETPVVLVFLTRLGVVSASTLVD--YWRVIILVVLVFGAVITPDPDVVSMILLAIPLIALYGL---ALVISK 233 (237)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHH--hhhHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHH---HHHHHh
Confidence 3333334655555666 3333332222 23344555677777764326677777778888888876 466553
Done!