Query 000295
Match_columns 1711
No_of_seqs 187 out of 233
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 03:14:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000295.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/000295hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF11894 DUF3414: Protein of u 100.0 7E-193 1E-197 2013.4 123.4 1345 9-1472 191-1685(1691)
2 KOG1835 Uncharacterized conser 100.0 3E-127 6E-132 1228.5 86.7 1524 4-1703 53-1703(1704)
3 KOG1835 Uncharacterized conser 99.9 3E-23 6.5E-28 270.4 55.7 1196 1-1355 88-1577(1704)
4 PF10487 Nup188: Nucleoporin s 99.7 1.2E-14 2.7E-19 193.6 46.7 649 12-775 167-927 (931)
5 KOG4833 Uncharacterized conser 99.0 1.7E-08 3.7E-13 115.6 18.5 271 11-341 117-403 (573)
6 PF10508 Proteasom_PSMB: Prote 72.4 35 0.00076 44.4 13.3 184 1241-1446 162-366 (503)
7 PLN03205 ATR interacting prote 49.7 2.4E+02 0.0052 34.8 13.2 52 791-842 534-597 (652)
8 PF10508 Proteasom_PSMB: Prote 26.6 2.5E+02 0.0053 36.7 9.6 144 275-448 179-327 (503)
9 KOG0889 Histone acetyltransfer 20.0 2.6E+02 0.0056 43.7 8.3 139 525-705 652-796 (3550)
10 KOG0946 ER-Golgi vesicle-tethe 18.3 1.3E+03 0.029 31.5 13.2 78 747-826 231-322 (970)
No 1
>PF11894 DUF3414: Protein of unknown function (DUF3414); InterPro: IPR021827 This family of proteins are functionally uncharacterised. This protein is found in eukaryotes. Proteins in this family are typically between 764 to 2011 amino acids in length. This protein has a conserved LLG sequence motif.
Probab=100.00 E-value=6.6e-193 Score=2013.38 Aligned_cols=1345 Identities=31% Similarity=0.448 Sum_probs=1131.3
Q ss_pred CCCCCCchhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHHHHHhccccccCCCCcchHHHHHH
Q 000295 9 PTGLGGPLCERYVLDSRGALVERRAVVYRERLILGHCLVLSVLVVRTSPKDVKDAFSALKDSAAELSENNDTLKHQITFS 88 (1711)
Q Consensus 9 ~~~lg~~~~~~~v~~~~~~~~~~~~~~~~~r~~L~~~l~~~~~~~~~~~~d~~~ll~~Lk~~~~~~~~~~d~v~l~~~~~ 88 (1711)
++++|+++|++++.++. .++|+.||+|||+|++...++++|+++++++||+.+ ++|.+.+|++|+
T Consensus 191 ~~~~~~~~~~~~~r~~l----------~~~~~~La~iL~~~~~~~~~~~~~~~~ll~~l~~~~-----~~D~~~~~~lpa 255 (1691)
T PF11894_consen 191 NRALGFQEHIEFQRDSL----------FEEHESLAQILYLLVKQSYLSPEDFKKLLDHLKKLD-----SNDFLTVHYLPA 255 (1691)
T ss_pred cccccchhHHHHHHHHH----------HHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcC-----CCchhhHHHHHH
Confidence 56999999999999996 999999999999999999999999999999999974 689999999999
Q ss_pred HHHHHHHhhhcccCCCCCccccccccchHHHHHHHHHHHcCCCCCCCcchhHHHHHHHHHHHHhhcchhhhhhhcCCCCc
Q 000295 89 LLFSLVIAFISDALSTVPDKSSVLSRDASFRKEFHEIVMATGSDPIVEGFVGGVRLAWAVHLMLIHDEIAARETVSSSSS 168 (1711)
Q Consensus 89 ll~a~~~s~~~~~~~~~~~~~~~~~~d~~~~~~l~~~l~~~~~~W~~~~l~a~v~laW~~~l~~~~~~~~~~~~~~~~~~ 168 (1711)
++|+++.+ ++..+...|+..|+++.+.|++.+.++. +|+.+||+++|++||+++|+++...++.... ...
T Consensus 256 ll~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~l~~~~-~w~~~~l~a~i~l~w~~~l~~~~~~~~~~~~---~~~ 325 (1691)
T PF11894_consen 256 LLAAIDIS------GGSPLGSLPLSDDRELHSQIHKELDSDS-DWKLPGLKAVIQLAWLLFLIGWCKDDPSLEA---QGI 325 (1691)
T ss_pred HHHHHHhh------cccccccCcchhHHHHHHHHHHhhcccc-ccccccHHHHHHHHHHHHHHHHHcCCccccc---ccc
Confidence 99999875 3344678899999999999999998755 5999999999999999999997775433311 124
Q ss_pred hhhHHHHHHHHHHHhcCcHHHHHHHHHhccCCCCC---------------------------chhH-HHHHHHHHHHHHH
Q 000295 169 SELSNIRSCLETIFSNNVFQFLLDKALRTAAYQND---------------------------DEDM-VYMNNAYLHKLIT 220 (1711)
Q Consensus 169 ~~~~~~~~~~~~Al~~~vF~Fl~~~ll~~~~~~~~---------------------------~~~~-~~f~~~~lh~li~ 220 (1711)
+..+++++++++||++|||+||++.++++..++.. ++.+ +.|+++++|.||+
T Consensus 326 d~~~~~~~~~~~ai~~gaf~fL~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~p~~~~~~~~~s~~~~~~~~~~~l~~~i~ 405 (1691)
T PF11894_consen 326 DFKDDDEKLFEEAIEDGAFEFLLSIAADTPEWQDPSRWSNFYDFRSLLQRKIPRLTPENDSFSEFFNEEFFMRQLHSFID 405 (1691)
T ss_pred CHHHHHHHHHHHHHHcChHHHHHHHHHhcccccchhhhhhhHHHHHHHHhhccccccccccccHHHHHHHHHHHHHHHHH
Confidence 45567779999999999999999999998333321 2223 4589999999999
Q ss_pred HHhhhhhhHHHHHHHHHHHHhhhhhhhhccCcccccCCCCCCCCCCCCCCCcHHHHHHHHHHHhccCcccccccccch--
Q 000295 221 CFLSHQLARDKVKESKDKAMSVLNSYRIAGSHDFVHDSNLPSQQDTEIGPLPFVSLLEFVSEIYQKEPELLSGNDVLW-- 298 (1711)
Q Consensus 221 ~fI~~~~m~~kvk~lr~~~de~~~~~r~~~~~~~~~d~~~~~~~~~~~~~~dlE~fll~ia~~Y~~~P~~~~~~~~fW-- 298 (1711)
+||++ ||+|||+||.+|||++ |..+.+ ..++. ..++.++++.|||+||++|+++|++||+++ .+||
T Consensus 406 ~fI~~--m~~~l~~Lr~~eed~~---~~~~~~--~~~~~--~~~~~~~~~~dlE~fl~~ia~~Y~~rPe~~---~~FW~d 473 (1691)
T PF11894_consen 406 SFISN--MPDKLRKLRDREEDSL---LSSQTH--QQEGE--DPPDDISLRADLERFLLLIAYLYDGRPELA---LEFWSD 473 (1691)
T ss_pred HHHHh--hHHHhhhhchhHHHHH---HHhHhh--hhcCC--CCCcccchhhhHHHHHHHHHHHHcCChHHH---HHhCCC
Confidence 99996 9999999999999995 444433 22221 111346779999999999999999999999 8999
Q ss_pred --------hHHHHhhccCCCcchHHHHHHHHHHhcCCchhHHHHHHHhcCCC-----CCcccHHHHHHHHHHHHHHhhh-
Q 000295 299 --------TFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVYELLQGKA-----FRSIGWRTLFDCLSIYDEKFKQ- 364 (1711)
Q Consensus 299 --------gFl~wa~~~~~~~~~~~afl~ML~sLa~g~e~A~~~~~~L~~~~-----~~~vSW~~iF~~L~~Y~~~l~~- 364 (1711)
||++||+++++ +++++|||+||+|||+|++||++||+||++++ .+++||+|||++|++|++++++
T Consensus 474 ~e~~s~l~gFl~wa~~~~~-~~l~~af~~ML~sLs~g~~~A~~a~~~L~~~~~~~~~~~~~SW~~if~~L~~Y~~~l~~~ 552 (1691)
T PF11894_consen 474 PEVTSNLYGFLRWASDRNP-SPLVSAFLEMLASLSSGPECASAAFNFLKDNSGKGRRSSSVSWDQIFQSLQYYIDKLRQQ 552 (1691)
T ss_pred cccchhHhHHHHHHhhcCC-chhHHHHHHHHHHHcCChHHHHHHHHHHhhcccCCCCCCcccHHHHHHHHHHHHHHhccc
Confidence 69999999976 78889999999999999999999999999764 3599999999999999999993
Q ss_pred cc-ccCCC------CCC--CCChhhHHHHHHHHHHHHHHHhcCcc-----ccccccCCChHHHHHhccCCCCChhHHHHH
Q 000295 365 SL-QTGGA------LLP--DFQEGDAKALVAYLNVLQKVMENGNS-----IERKNWFPDIEPLFKLLSYENVPPYLKGAL 430 (1711)
Q Consensus 365 ~~-~~~~~------~~~--~~~~ee~~~L~a~L~Li~~V~~~~~~-----~e~~~w~~~i~~Lf~Ll~~~~VP~~LKa~i 430 (1711)
.. ++.++ ..+ +++|+|++||+|||+||++||++++. +++++|.+ +++||+|++ |+||+.|||++
T Consensus 553 ~~~~~~~~~~~~~~~~~~~el~~ee~~~L~a~L~Li~~V~~~s~~ar~~l~~~~~~~~-~~~L~~L~~-~~vp~~Lkaai 630 (1691)
T PF11894_consen 553 QQQQQSQSIQRSRSPPPEIELSPEEVEMLSAYLRLISSVVRNSEQARSALLENPNWNP-IDILFGLLS-CPVPPSLKAAI 630 (1691)
T ss_pred cCCCCccccccCCCCCcccCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHhCCCCch-HHHHHHHhc-CCCCHHHHHHH
Confidence 22 22111 122 36999999999999999999999874 46678886 999999999 69999999999
Q ss_pred HHHHHHhhhcChhhHHHHHHHHhhccCCCccccCCCCCCcccCCcccchHHHHHHHhhhccCCcchHHHHHHHHHhhcCC
Q 000295 431 RNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQPIAGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEE 510 (1711)
Q Consensus 431 ~~tLaal~~~s~~~a~~iW~~Ld~~~~~~~~~~~~~~~~~~~~~~~~gi~~el~eiE~~~~~Yp~T~aFl~LL~~Li~~~ 510 (1711)
|+||+||+.++++++++||+.||+|++..+..++.+.. .++..|+..|++++|++.++||+|+||++||++|++|+
T Consensus 631 ~~~Laal~~~~~~~~~~iW~~Ld~~~~~~~~~~~~~~~----~~~~~~i~~el~~~e~~~~~y~~t~aFl~Ll~~Li~~~ 706 (1691)
T PF11894_consen 631 FNALAALAAKSPEIANQIWQLLDQWQILSTAPTPSSSA----LPQPSGIQSELEEFESRLEEYPETRAFLQLLNALISPP 706 (1691)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHhcCCCCCCCcccc----cCCCccHHHHHHHHHhhhcCCchHHHHHHHHHHHhCCC
Confidence 99999996559999999999999999965532222111 12668999999999999999999999999999999998
Q ss_pred ------------CCCCCCccc---cchhHHHHHhhhhCCCCccccCCchhHHHHHHHHHHHHHHHHhcccCCchhhhhhh
Q 000295 511 ------------KDVSDRGRR---FVGIFRFVYDHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAV 575 (1711)
Q Consensus 511 ------------~~~lg~g~R---~~py~~FV~~~VF~~~~~r~Y~~~~ekw~l~~~cL~~f~~~L~~y~~~~edl~~~~ 575 (1711)
|..+|.||| +|||++||+++||++ ++|.|+||.|||+++..||++|+++|++|+|+ +....
T Consensus 707 ~~~~~~~~~l~~P~~LG~~~R~~Gi~pY~~fv~~~Vf~~-~~r~y~~~~ekw~l~~~cL~~~~~~L~~f~~~---~i~~~ 782 (1691)
T PF11894_consen 707 SDSSFLNDSLPFPENLGAGYRMPGIWPYVDFVLDEVFLK-SSRSYKDPSEKWQLALSCLEFFEKCLSSFDPS---FILNS 782 (1691)
T ss_pred cccccccccCCCccccCccccCCCcHHHHHHHHHHHHhc-cchhcCCHHHHHHHHHHHHHHHHHHHHhCCHH---HHhhc
Confidence 667999999 889999999999999 99999999999999999999999999999985 33333
Q ss_pred hcCCCcCCC----Cccccc---CcHHHHHHHhccChHHHHHHHHhhccchhhHhhhhccCccChHHHHHHHHHHHHHHHH
Q 000295 576 EQSSTLTQS----SPIQMQ---LPVLELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILV 648 (1711)
Q Consensus 576 ~~~~~~~~~----~~l~~y---~P~~~vm~~~L~~~~v~~~l~~ii~~Gvd~l~~e~~~~~y~~~l~~~vl~aL~Il~~v 648 (1711)
.+++.+.+. .++.+| |||++||.+||+++++++.||+|+++|+|.+.++.+. .+++++++|+++||+||+++
T Consensus 783 ~~~~~~~d~~~~~~~~~~~v~~hP~~~vm~~~l~~~~~~~~l~~ii~~g~~~l~~~~~~-~~~~~l~~~v~~~L~Il~~v 861 (1691)
T PF11894_consen 783 NESNINLDSIVDTSDLATYVKLHPGFRVMLELLFDEKVLRSLFSIIDEGVDSLDSYSPD-PGGSPLEECVLRSLRILNRV 861 (1691)
T ss_pred ccccccccccccccchhhhhhcCcHHHHHHHHhcCcHHHHHHHHHHHHhHHHHhhcCcc-cchHHHHHHHHHHHHHHHHH
Confidence 333332222 456666 8999999779999999999999999999999877653 35799999999999999999
Q ss_pred Hhhhhhhhhhhccccc------chhhhh----------ccCchHHHHHHhhhccCCcchhHHHHHHHHHHHhh--hh---
Q 000295 649 FEKDLLLSDFWRPLYQ------PVDVIL----------SQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILSS--RM--- 707 (1711)
Q Consensus 649 L~~q~~f~d~lrpi~~------~ld~lL----------s~~~~~I~~L~~Yv~~~~~p~lal~SikIL~~ls~--r~--- 707 (1711)
|++|++|+|.+||+++ +.+.++ .++.+.|++||+|||.++ |+|++.|+|||++++. ..
T Consensus 862 L~~Q~~f~~~~~p~~~~~~~~~~~~~~~~~~~sf~~~~~~~l~iv~~l~l~~~~~~-p~ial~alkIL~~ls~s~~~~~~ 940 (1691)
T PF11894_consen 862 LELQDTFLDVVRPILKSDIIYRPLDVLLLGLNSFEDAILFNLNIVVHLGLYVGSDH-PEIALLALKILSKLSSSPKFNSA 940 (1691)
T ss_pred HHHHHHHHHHHHHHhcccccccChHHHhhccCcchhhhcchHHHHHHhHhhcCCCC-HHHHHHHHHHHHHHHcCCCCccc
Confidence 9999999999999888 344433 357788999999999887 9999999999999982 23
Q ss_pred ----------hhHHHHHhhhchhHHHHHHHHHHhccccccccc-cccCCCChHHHHHHHHHhccCCC--CChHHHhhhCC
Q 000295 708 ----------VGLVQLLLKYNAASSLVEDYAACLELRSEESQI-IEKSGDDPGVLIMQLLIDNISRP--APNITHLLLKF 774 (1711)
Q Consensus 708 ----------~~lv~~l~~~~es~~I~~~Fv~~Le~~~~d~~~-~e~~~~~~k~~IL~lLl~nL~~~--~PnlAHlLLGF 774 (1711)
++++++|++++++.+|++|||+|||.++++.++ .+.....+|..||+||++||+.+ +||||||||||
T Consensus 941 ~~~~~~~~~~n~ll~~l~~~~es~~I~~~fv~~Le~~~~~~~~~~~~~~~~ik~~IL~lL~~~L~~~~~~PniAHlLLGF 1020 (1691)
T PF11894_consen 941 DSFSSRRLRRNRLLTILESSDESERIRFGFVEQLEADIDEFEEGAESPSLSIKLAILDLLLENLSQPPPAPNIAHLLLGF 1020 (1691)
T ss_pred ccccccccchhHHHHHHhcccHHHHHHHHHHHHHccccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcHHHHHhCC
Confidence 469999999999999999999999988665443 33344679999999999999755 99999999999
Q ss_pred ccCCCCccccccC----CCCcchHHHHHHHHHhcCCCC-------CchhHHHHHHHHHHHhhcCCCCcHHHHHHHhcccc
Q 000295 775 DLDTPIERTVLQP----KFHYSCLKIILEILEKVSKPD-------VNALLHEFGFQLLYELCLDPLTCGPTMDLLSNKKY 843 (1711)
Q Consensus 775 dv~~~~~~~~l~p----~~~~ScLhsIL~lL~~~~~~~-------~~p~L~e~~~~lL~~Lc~~p~TS~~tL~~LR~~~~ 843 (1711)
++.+++..+..+| ++++||||+||++|++++++. .+|+|+|+||+|||+||+||+||+|||||||+++
T Consensus 1021 ~~~~~~~~~~~~~~g~~~~~~S~lhsiL~lL~~~~~~~~~~~~~~~~~~L~e~~~~ll~~Lc~~p~TS~~~L~~LR~~~- 1099 (1691)
T PF11894_consen 1021 DVRGNVSSLSLQDPGFFGSPRSCLHSILDLLESSLDSDSNSDIDYWPPRLAELCYRLLYKLCSSPLTSEPTLRYLRSNN- 1099 (1691)
T ss_pred CcCCchhhcccccccccCCcCcHHHHHHHHHHhccccccCcchhcccHHHHHHHHHHHHHHHcCCcchHHHHHHHHhHH-
Confidence 9998888888885 468999999999999988632 2489999999999999999999999999999975
Q ss_pred chHHHhhhhcC-CCCCCCCCCch------------hHHHHHHHHHHHHHHHHHHHHHhhcCCCcchhHHHHHHHHhhcCC
Q 000295 844 QFFVKHLDAIG-VAPLPKRNSNQ------------ALRISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLFGR 910 (1711)
Q Consensus 844 dff~~~L~~~~-i~~l~~~~~~~------------~~~~s~L~~rs~lL~~~AlEL~~~~~~~s~~~~~~~~ll~~L~g~ 910 (1711)
|||.+|+...| ++|.+.|+|.. .++.+||++|||+|||+|+|||.++. .++++.+++|++.|+|.
T Consensus 1100 df~~~~l~~~p~i~~~~~w~g~~~~~~~f~~~~~~~~~~~~L~~Rs~lL~~~AlEL~~~s~--~~~~s~~~~l~~~Ll~~ 1177 (1691)
T PF11894_consen 1100 DFFFRHLSSLPFIDPQTIWDGERISDPDFFLSTSASALISFLHQRSWLLKYLALELHSLSQ--SGQRSQKRRLLSLLLGN 1177 (1691)
T ss_pred HHHHHHHHcCCCCCcccccccccccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCHHHHHHHHHHHhcc
Confidence 99999999998 78999999853 27889999999999999999999875 47888999999999992
Q ss_pred CccC-CCCcccccccccccccccccccccchhhhhhhhccccCCCCCchhhhhhhhhhcchhhHHHHHhcCCCCCCCCCc
Q 000295 911 DHIE-DTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDTAMKLSQIVSNMKYDLLAEEILGNPTTSGKGGI 989 (1711)
Q Consensus 911 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~lLd~l~F~~~d~~~~~p~~~~~~~~~~~~~~~~~~c~~~~~g~~ 989 (1711)
.... .++. ....+.||+|||.++|.+ ....+.|++ +++.+..++..+.+|.
T Consensus 1178 ~~~~~~~~~------------------~~~~~~i~~lld~l~~~~-~~~~~~~~l--~~f~~~~l~~~~~~c~------- 1229 (1691)
T PF11894_consen 1178 SQSSTDDGE------------------PIINPSIFDLLDFLDFDF-SWEFPPPQL--EFFDDLDLELCLEECT------- 1229 (1691)
T ss_pred ccccCCCCC------------------CccccHHHHHHhhhCCCc-ccCCCCchh--hhhchhcHHHHHHhcc-------
Confidence 1111 0111 124556999999999999 223344443 3445555666666672
Q ss_pred eeecCCCcccccHHHHHHHHHHhhhhccccccCCCchhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000295 990 YYYSERGDRLIDLSSFSDKLWKKLNIVYPQLSNFGSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEV 1069 (1711)
Q Consensus 990 ~~~~~~g~~l~di~~L~~~L~~e~~~~~~~~~~~~~~~~~~~~~~Ei~~iL~~~~~~N~~~~~~~a~~~~L~aW~qLv~V 1069 (1711)
.+.+|++++|+.++++++..+.+..+++.. . +.++.+.+++|++.|++|++++|+.++.++||+++|+||+|||+|
T Consensus 1230 --~~~~g~~~~Dl~~l~~lL~~~~~~~~~~~~-~-~~~~~~~v~~E~~~il~~~~~~N~~~~~~~a~~~~L~sW~qLv~V 1305 (1691)
T PF11894_consen 1230 --DSEGGVRLYDLSKLHELLQLERKSLQSSGQ-L-TAQQREAVEEEIQKILEYAVARNRRRELAAAQLHALESWRQLVEV 1305 (1691)
T ss_pred --ccCCCCeEeeHHHHHHHHHHHHHHhhcccc-c-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 134567899999999999999988876521 1 456788899999999999999999999999999999999999999
Q ss_pred HHhccccchhhHHHHHHHHHHHHhhccCC-CccchHHHHHHHHHHHHHHHHhhhccccCCCCCCCCCccchhhhhhhccc
Q 000295 1070 SVSRRISALGNRSEILYQILDACLGASAS-PDCSLRMAFILCQVALTCMAKLRDEKFLCPGGLNSDSVTFLDVIMVKQLS 1148 (1711)
Q Consensus 1070 ~~s~~~~~~~~r~~~Ild~L~~il~ki~~-~~~~~~~a~~Ls~l~ltLl~~Lr~~~~~~~~~~~~~~~~~~d~~~~~~L~ 1148 (1711)
+++++......|.++|+|+|+.++||+++ .+.+++++.++++++++|+++||.++..... ....++++
T Consensus 1306 ~~~~~~l~~~~r~~~ile~Lq~iLpkl~~~~~~~~~~a~~ls~l~l~L~~~L~~~~~~~~~-----------~~~~~~l~ 1374 (1691)
T PF11894_consen 1306 LVSDCPLSPDQRSNFILELLQAILPKLEDYPECDPEFAEELSSLALTLLAKLRQDRISQSD-----------SEDSGSLP 1374 (1691)
T ss_pred HHHhCCCCHHHHHHHHHHHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHhhhhcccc-----------cccccccc
Confidence 99999988899999999999999999995 4889999999999999999999998631100 11124477
Q ss_pred cchhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhccCCCCchhhHHhhhhccccCcchhhhhhhhHHHHhHHH
Q 000295 1149 NGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQHMLAPDVPTTVLQYLLLDEQDGEDLDLQKIDKEQAELTHA 1228 (1711)
Q Consensus 1149 ~~~~~~iL~~ll~~Il~~~ss~~lR~~lY~~l~~yLq~~~~~~~~~~~~~~~~~ll~~~~~~~d~~~~~~~~~~~~l~~~ 1228 (1711)
.+++++||+.+|+||+++++++.+|+|+|++|++||+++.+....+....... +..+ +.....++++
T Consensus 1375 ~~~L~~lf~~~l~~Il~~~ss~~lR~~lY~~l~~yL~~~~~~~~~~~~~~~~~----~~~~---------~~~~~~l~~~ 1441 (1691)
T PF11894_consen 1375 DSRLHQLFKSCLQGILSSGSSQRLRSNLYAILLNYLQIVQKNSSLEDGQSLSS----RLDD---------SSEQSSLEKM 1441 (1691)
T ss_pred hhHHHHHHHHHHHHHhccCCCHhHHHHHHHHHHHHHHHhcccccccchhcchh----hccc---------chhhHHHHHH
Confidence 88999999999999999999999999999999999999976553111111110 0000 1122358999
Q ss_pred HHHHHHhhhhHHHHHHhhcccCCCcchHHHHHHHHHHHHccc---CcchHHHHHHhcCcHHHHHHHhhhh--hhhcccc-
Q 000295 1229 NFSTLRKEAQAILDLFIKDATQGSEPGKTLSLYVLDALICID---HEKYFLNQLQSRGFLRSCLMNVSNV--SYQDGKR- 1302 (1711)
Q Consensus 1229 ~~~iI~~~ge~LidvIc~DA~~G~~~~r~~Al~lLd~Lv~ld---~~~~il~~L~~~g~L~~lv~sl~~~--~L~~~~~- 1302 (1711)
++++|+++|++|||+||+||++|||+|||+|++|||+|+++| .+++|+++|.|+|||+++|++++++ .|++...
T Consensus 1442 ~~~~i~~~g~~Li~vic~DA~~g~~~~r~~Al~lLdaLv~ld~~~~~~~il~~L~~~g~L~~lv~sl~~~d~~l~~~~~~ 1521 (1691)
T PF11894_consen 1442 NLQIIKSYGERLIDVICRDAIDGHGVCRILALSLLDALVQLDSQEKSNFILEYLSRRGYLKSLVDSLKRTDEDLQASLQP 1521 (1691)
T ss_pred HHHHHHHhhhHHHHHHHhHhhcCcccHHHHHHHHHHHHHHhcccccccHHHHHHHhCCcHHHHHHHHHhhHHHHHhccCC
Confidence 999999999999999999999999999999999999999999 5799999999999999999999754 6888666
Q ss_pred CcchhhHHHHHHHHHHHHHHHhhhcCcchHHHHHhcchhHHhhhcccccccCccccc--ccC--CCccCCchhhhhhhhh
Q 000295 1303 SLDTLQRACTLEAELALLLRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQGSLRRV--ATK--PRRALGGDIDRQRMIV 1378 (1711)
Q Consensus 1303 ~~~~l~~L~~yea~laLLlriAq~~tr~GA~~Ll~~gl~~~L~~~~~~~~~Pd~~~~--~~~--~~~~~p~~~~ry~~lL 1378 (1711)
.|+++++||+|||+|+||+|||| ||.||++|+++|+|++|++|+||++|||.+.. +++ +..+ |++.+|||++|
T Consensus 1522 ~~~~l~~L~~yea~laLL~RiAq--tr~GA~~Ll~~~lf~~L~~~~~l~~~Pdl~~~~~~~~~~~~~~-p~~~~ry~~lL 1598 (1691)
T PF11894_consen 1522 IPDSLRELYVYEAKLALLLRIAQ--TRSGAEALLQSGLFQVLAECKFLDADPDLGLDLMFDNSDPMSF-PSALERYYQLL 1598 (1691)
T ss_pred CCcchHhHHHHHHHHHHHHHHHc--ChHHHHHHHHCCHHHHHHcCCCcCCCCccchhhcccccccccC-chHHHHHHHHH
Confidence 89999999999999999999999 99999999999999999999999999998643 332 2223 99999999999
Q ss_pred HHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCChhhHHHHHHHHHHHHhccccccCCchh
Q 000295 1379 TPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQENISEADELTMEQINLVVGILSKVWPYEESDEYG 1458 (1711)
Q Consensus 1379 ~PvlrL~~sv~~~~~s~G~~~~n~~~~~qv~~FL~~h~~li~~vLr~~~~~~~~~~Leel~ll~~ll~~~~~~~~~~~~~ 1458 (1711)
+||||||+++++++ | ++|++++.||++||.+|+++|++|||++++..+.+..++..++++...+.+++++....
T Consensus 1599 ~PvlrLi~ail~s~---G--~~n~~~~~qv~~FL~~h~~lv~~vLk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1672 (1691)
T PF11894_consen 1599 VPVLRLISAILSSL---G--SSNKSAVQQVLNFLKAHRDLVVGVLKRDALIGNLGSSEIYSLVNSKLSKDWPYEESRLS- 1672 (1691)
T ss_pred HHHHHHHHHHHHhc---C--cccHHHHHHHHHHHHHHHHHHHHHHhccccccccccccchhhhhhhhhhhhhhhhhhHH-
Confidence 99999997776666 8 99999999999999999999999999999999888888888888888888777655332
Q ss_pred hHHHHHHHHHHHhh
Q 000295 1459 FVQGLFGMMSSLFS 1472 (1711)
Q Consensus 1459 ~~~~l~~l~~~l~~ 1472 (1711)
.+++..|+.+++-
T Consensus 1673 -~~~l~~l~~~f~~ 1685 (1691)
T PF11894_consen 1673 -QQGLEELVKLFML 1685 (1691)
T ss_pred -HHHHHHHHHHHhh
Confidence 5567776666543
No 2
>KOG1835 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=2.8e-127 Score=1228.51 Aligned_cols=1524 Identities=25% Similarity=0.284 Sum_probs=1181.5
Q ss_pred cccccCCCCCCchhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHHHHHhccc-cccCCCCc-c
Q 000295 4 LNREEPTGLGGPLCERYVLDSRGALVERRAVVYRERLILGHCLVLSVLVVRTSPKDVKDAFSALKDSAA-ELSENNDT-L 81 (1711)
Q Consensus 4 ~~~~~~~~lg~~~~~~~v~~~~~~~~~~~~~~~~~r~~L~~~l~~~~~~~~~~~~d~~~ll~~Lk~~~~-~~~~~~d~-v 81 (1711)
++|| +++|+.+|...|.|.. .+++++++.+|+- .++...+.+|...|...+..+.. ++.|++|. |
T Consensus 53 l~re--~~~~~~~e~~~V~~~~----------~e~~~slal~Ls~-~~~~~ln~~~~~~L~g~l~~q~~~~~~g~~~~~v 119 (1704)
T KOG1835|consen 53 LDRE--KLFGGEVEMDGVEDLL----------DEEIQSLALILSD-QLIFQLNREDALLLRGQLAAQKLHFAGGNLDLYV 119 (1704)
T ss_pred HHHH--hhcccccchHHHHHHH----------HHHHHHHHHHHhh-hhhhcccchhHHHHhhHHHHHHHHhcccchhHHH
Confidence 4454 6899999999999996 9999999999999 77888888899999999987664 78888887 9
Q ss_pred hHHHHHHHHHHHHHhhhcccCC-CCCccccccccchHHHHHHHHHHHcCCCCCCCcchhHHHHHHHHHHHHhhcchhhhh
Q 000295 82 KHQITFSLLFSLVIAFISDALS-TVPDKSSVLSRDASFRKEFHEIVMATGSDPIVEGFVGGVRLAWAVHLMLIHDEIAAR 160 (1711)
Q Consensus 82 ~l~~~~~ll~a~~~s~~~~~~~-~~~~~~~~~~~d~~~~~~l~~~l~~~~~~W~~~~l~a~v~laW~~~l~~~~~~~~~~ 160 (1711)
.+...|+++||++++.+...++ +....++|.+.|..|+-+.++.+..+. -|..|.|.+.|++.|...++++.+.+.-.
T Consensus 120 ~l~~~l~l~~~lv~sil~~~~~~~di~~~l~~~~~~~~i~e~~n~l~~qq-i~~~p~l~~~v~~~~~~~l~~~~~~~~i~ 198 (1704)
T KOG1835|consen 120 ALRELLILLYALVTSILMLKEEREDIPTRLKIFLNSAFILENGNKLLFQQ-IWFFPVLSLIVRLILPLILGLLGSKSQIL 198 (1704)
T ss_pred HHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHhHHHHHHHHHHHHHHH-HHhhhhHHHHHHHHHHHHhhcccchhHHH
Confidence 9999999999999998887774 334678899999999999999999877 49999999999999999999887764211
Q ss_pred hhcCCCCchhhHH-HHHHHHHHHhcCcHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Q 000295 161 ETVSSSSSSELSN-IRSCLETIFSNNVFQFLLDKALRTAAYQNDDEDMVYMNNAYLHKLITCFLSHQLARDKVKESKDKA 239 (1711)
Q Consensus 161 ~~~~~~~~~~~~~-~~~~~~~Al~~~vF~Fl~~~ll~~~~~~~~~~~~~~f~~~~lh~li~~fI~~~~m~~kvk~lr~~~ 239 (1711)
...+..+. ++.++.++.- ++|-|+...++...-|+..+ |+.++.|.++|+||+ +|+.|.+++|.+.
T Consensus 199 -----~~~~f~~~~de~~v~e~~~-~~f~~~~~~~~~~hLf~~~~-----f~~~~v~ll~T~f~~--~m~~~~s~l~~~~ 265 (1704)
T KOG1835|consen 199 -----QRAAFIEIRDEVHVSELDI-NVFPGINYLLASVHLFQIVK-----FVIRRVHLLITAFID--DMKIKSSELLPRA 265 (1704)
T ss_pred -----HHHHHHHHHHHHHHHHhhc-ccchhhhhHHHHHHHHHHHH-----HHHHHHHHHHHHHHH--hcccchHHhhhhH
Confidence 12333334 6777888877 89999999998888888776 889999999999999 7999999999999
Q ss_pred HhhhhhhhhccCcccccCCCCCCCCCCCCCCCcHHHHHHHHHHHhccCcccccccccch---------------------
Q 000295 240 MSVLNSYRIAGSHDFVHDSNLPSQQDTEIGPLPFVSLLEFVSEIYQKEPELLSGNDVLW--------------------- 298 (1711)
Q Consensus 240 de~~~~~r~~~~~~~~~d~~~~~~~~~~~~~~dlE~fll~ia~~Y~~~P~~~~~~~~fW--------------------- 298 (1711)
++.. +...+ ++..+ .+++...+.|++.++..++..+...|.....+.+||
T Consensus 266 ~~~i---~~vl~--~~~~~----~~~~~~lr~~~~~~ml~l~~~~~~~p~~~~~~~e~~~~~~p~~v~~~~~~s~~~~l~ 336 (1704)
T KOG1835|consen 266 DADI---FQVLT--NMILG----IEPPPQLRSNAMCLMLQLAEAVTSKPIAGSLSDELWIPNDPVIVERVKDRSRRVVLF 336 (1704)
T ss_pred HHHH---HHHHH--HHhcc----cCCCcccchhHHHHHHHHHHHhcCCccccchhHHhcCCCCchhhHhhhhhhHHHHHH
Confidence 9773 33222 11111 123334599999999999999999999887778888
Q ss_pred hHHHHhhccCCCcchHHHHHHHHHHhcC--CchhHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHhhhccccCCCC----
Q 000295 299 TFVVFAGEDHTNFQTLVAFLKMLSTLAS--SQEGASKVYELLQGKAFRSIGWRTLFDCLSIYDEKFKQSLQTGGAL---- 372 (1711)
Q Consensus 299 gFl~wa~~~~~~~~~~~afl~ML~sLa~--g~e~A~~~~~~L~~~~~~~vSW~~iF~~L~~Y~~~l~~~~~~~~~~---- 372 (1711)
.|++.|++.. +|..+.++.+|+++++. ...++.+.++-..|+ .++|.|+|++++.|++.+|++.++++++
T Consensus 337 sfl~~a~~~l-~~t~~~~~~ki~s~l~~~~~~~~p~~~~e~~~g~---gv~W~~ff~~~~~y~~~~r~~~~~~~~~i~~~ 412 (1704)
T KOG1835|consen 337 SFLRQAIDLL-PHTNYIHQLKIFSGLTTSLLSYFPAKLVETERGN---GVSWLHFFDSLRSYQTTTRKDLPPAGSTIYRT 412 (1704)
T ss_pred HHHHHhcccc-chhhHHHHHHHHHHHHHHHHHhcchhhhhhhccC---CccchhhhhhHhhhhHHhhccCCCcccceeee
Confidence 4999999884 35669999999999999 334444555555554 4999999999999999999998886654
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHhcCcc---ccccccCCChHHHHHhccCCCCChhHHHHHHHHHHHhhhcChhhHHHHH
Q 000295 373 LPDFQEGDAKALVAYLNVLQKVMENGNS---IERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIW 449 (1711)
Q Consensus 373 ~~~~~~ee~~~L~a~L~Li~~V~~~~~~---~e~~~w~~~i~~Lf~Ll~~~~VP~~LKa~i~~tLaal~~~s~~~a~~iW 449 (1711)
.+.+.+.++.+|.+|++++++|++.++. |.+++|.|. .++.++ . |++|+.||+++.++|+||+ +|..+|
T Consensus 413 l~t~~Q~~~~~l~a~l~vlq~iie~~~~~~~c~~p~~ep~-~~llg~-~-~~~p~~lk~eL~~tlaaf~-----~a~siw 484 (1704)
T KOG1835|consen 413 LKTIAQKEVSYLVAFLNVLQTIIEEDERFLLCFHPDWEPQ-VVLLGY-Q-CNIPTYLKAELLKTLAAFS-----MAFSIW 484 (1704)
T ss_pred cchHHHHHHhhchhHHHHHHHHHhhchHHHhcCCCccccc-hhhhcc-c-cccchHHHHHHHHHHHHHH-----HHHHHH
Confidence 3456789999999999999999994442 667777652 244444 3 8999999999999999999 789999
Q ss_pred HHHhhccCCCccccCCCCCCcccCCcccchHHHHHHHhhhccCCcchHHHHHHHHHhhcCCCCCCCCccccchhHHHHHh
Q 000295 450 RLLEQYDLPVVVGTHVGNTAQPIAGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEEKDVSDRGRRFVGIFRFVYD 529 (1711)
Q Consensus 450 ~~Ld~~~~~~~~~~~~~~~~~~~~~~~~gi~~el~eiE~~~~~Yp~T~aFl~LL~~Li~~~~~~lg~g~R~~py~~FV~~ 529 (1711)
..+|..+++... +.+++. +..+|.+||+|+|+|.+.||.|++|+.|+.+ ++|.|.
T Consensus 485 ~~lE~~~~~~~v--~v~s~~-----~q~~i~~e~~eiear~cky~lTrs~lyli~s-------slgag~----------- 539 (1704)
T KOG1835|consen 485 FFLESCQLLETV--RVWSSH-----QQISIIVEFNEIEARVCKYNLTRSFLYLIFS-------SLGAGP----------- 539 (1704)
T ss_pred HHHHhcccceee--ecCccc-----chhHHHHHHHHHHHHHhcCccHHHHHHHHHH-------hhccCc-----------
Confidence 999999985543 455433 4556999999999999999999999999997 567775
Q ss_pred hhhCCCCccccCCchhHHHHHHHHHHHHHHHHhcccCCchhhhhhhhcCCCcCCCCcccccCcHHHHHHHhccChHHHHH
Q 000295 530 HVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLTQSSPIQMQLPVLELLKDFMSGKAVFRN 609 (1711)
Q Consensus 530 ~VF~~~~~r~Y~~~~ekw~l~~~cL~~f~~~L~~y~~~~edl~~~~~~~~~~~~~~~l~~y~P~~~vm~~~L~~~~v~~~ 609 (1711)
+|+.++++|+|++|.|||+++..||+.+.+.|+.|+|+.+|+++.++ +||+.||.+....+++...
T Consensus 540 ~v~l~gy~ray~~~sekW~~~~~clq~~~~~Ls~y~~q~~d~~~f~e--------------~pgf~I~~~lq~~s~liel 605 (1704)
T KOG1835|consen 540 SVALKGYDRAYREPSEKWQVIAQCLQSYTMLLSTYFPQLEDLLQFTE--------------RPGFKIDIPLQLESGLIEL 605 (1704)
T ss_pred hhHHHHHHHHhhcccHhHHHHHHHHHHHHHHhcccchhhhhhhcccc--------------CCccccchhhhhhhhHHHH
Confidence 89999999999999999999999999999999999999888554433 4777787777777788877
Q ss_pred HHHhhccchhhHhhhhccCccChHHHHHHHHHHHHHHHHHhhhhhhhhhhc-------------ccccchhhhhccCchH
Q 000295 610 IMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFEKDLLLSDFWR-------------PLYQPVDVILSQDHNQ 676 (1711)
Q Consensus 610 l~~ii~~Gvd~l~~e~~~~~y~~~l~~~vl~aL~Il~~vL~~q~~f~d~lr-------------pi~~~ld~lLs~~~~~ 676 (1711)
+..|+..++..+..-.+-+ -+..+++.+.|+-+......+|+.+.+.++ |+..+.+.. ..+++
T Consensus 606 a~~im~s~v~~ld~~~~~q--~~~~~~~~l~~~~~~~L~~~~~~sv~~~l~~a~~~Ll~~~l~r~L~~~npr~--wsadh 681 (1704)
T KOG1835|consen 606 ALIIMESSVLRLDEYAAFQ--FKEDEKSSLSKTLVLSLELAKQNSVPILLVAAMLDLLVSALARKLKGSNPRI--WSADH 681 (1704)
T ss_pred HHHHHHHHHHHHhhhcccc--ccccccccHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhhhhhcccchhh--hhhhH
Confidence 7777777776552211111 134567777888777777777777665443 222222222 23456
Q ss_pred HHHHHhhhccCCcchhHHHHHHHHHHHhh-h-hhhHHHHHhhhchhHHHHHHHHHHhc--cccccccccccCCCChHHHH
Q 000295 677 IVALLEYVRYDFLPQIQQCSIKIMSILSS-R-MVGLVQLLLKYNAASSLVEDYAACLE--LRSEESQIIEKSGDDPGVLI 752 (1711)
Q Consensus 677 I~~L~~Yv~~~~~p~lal~SikIL~~ls~-r-~~~lv~~l~~~~es~~I~~~Fv~~Le--~~~~d~~~~e~~~~~~k~~I 752 (1711)
|+++.+|+.++.+|.++..|+||+..++. + ...++..+.....+..++.+|++||| .+.++....|..+.+++ .|
T Consensus 682 v~ni~~y~~~g~lp~~~~~~ikil~~vs~~~~v~~Lv~~l~~~~~~~el~~~fv~cl~~~~r~e~g~~le~~~~~lg-~I 760 (1704)
T KOG1835|consen 682 VLNILKYSSDGGLPMGAQAAIKILECVSCVYNVGQLVKNLITLLMSRELPEGFVECLEEVTRLEEGLVLEFSPRSLG-SI 760 (1704)
T ss_pred HHHHhhhhhcCCchHhHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhHHHhhcchHHHH-HH
Confidence 99999999998899999999999999981 1 22477777777788999999999999 33443334445556677 89
Q ss_pred HHHHHhccCCCCChHHHhhhCCccCCCCccccccCCCCcchHHHHHHHHHhcCCCCCchhHHHHHHHHHHHhhcCCCCcH
Q 000295 753 MQLLIDNISRPAPNITHLLLKFDLDTPIERTVLQPKFHYSCLKIILEILEKVSKPDVNALLHEFGFQLLYELCLDPLTCG 832 (1711)
Q Consensus 753 L~lLl~nL~~~~PnlAHlLLGFdv~~~~~~~~l~p~~~~ScLhsIL~lL~~~~~~~~~p~L~e~~~~lL~~Lc~~p~TS~ 832 (1711)
..++..+++++.||++|+|+||+...+++...+++..+++|+|.++.+|++.+.++.++.+.|.||++++.||.||.|+.
T Consensus 761 ~~l~~~~~~~~~p~v~~~llg~~~~r~v~~~~lqI~~~~sCl~~il~mLeki~~~~~~~~~~e~~~~l~~~l~~~p~tA~ 840 (1704)
T KOG1835|consen 761 VQLFELNLNSLLPNVVLLLLGIDLKRAVMSNVLQIAIQYSCLNDILAMLEKIPRVSINEDLQEHNYNLFTYLCACPDTAI 840 (1704)
T ss_pred HHHHHhhccccCcchHHHhhhcccchhhhccCcchhhHHHHHHHHHHHHHhCCccccchhHHHHhhhhhhhccCCccchH
Confidence 99999999999999999999999999999999999999999999999999999877889999999999999999999999
Q ss_pred HHHHHHhccccchHHHhhhhcCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCcchhHHHHHHHHhhcCCCc
Q 000295 833 PTMDLLSNKKYQFFVKHLDAIGVAPLPKRNSNQALRISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLFGRDH 912 (1711)
Q Consensus 833 ~tL~~LR~~~~dff~~~L~~~~i~~l~~~~~~~~~~~s~L~~rs~lL~~~AlEL~~~~~~~s~~~~~~~~ll~~L~g~~~ 912 (1711)
|+|||||+...+|+..||...++..++ ...++.+++++|+++.+|++.+.++.+ . +++.+++...
T Consensus 841 p~lryL~t~~~~fll~~L~~~gf~ql~------~~~i~~lnq~~~l~k~~ai~~~vlsl~--~-------~~shl~~~~~ 905 (1704)
T KOG1835|consen 841 PILRYLSTEKAYFLLFHLVALGFDQLS------EIMISSLNQVSWLPKLLAIALTVLSLQ--R-------HYSHLFPDEL 905 (1704)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccccH------HHHhccchHHHHHHHHHHHHhccchHH--H-------HHHhccchhh
Confidence 999999977779999999996655433 356789999999999999999997531 2 3333333221
Q ss_pred cC------------CCCc-----cccccccccccccccc---ccccchhhhhhhhccccCCCCCchhhhhhhhhhcchhh
Q 000295 913 IE------------DTDR-----TLSLPFMVQNITEHAG---TRTISKSKVLELLEVVQFRSPDTAMKLSQIVSNMKYDL 972 (1711)
Q Consensus 913 ~~------------~~~~-----~~~~~~~~~~~~~~~~---~~~~~~~~il~lLd~l~F~~~d~~~~~p~~~~~~~~~~ 972 (1711)
.. ..|+ .+...| .++.+.+ .++.....+..++|+|.+... ....++ .++|+..
T Consensus 906 ~h~~~~~~l~d~~p~~g~~ag~~~i~~~n---~~vahl~~l~~~~~~~~~~~~ildiL~~~~~--~~~~~~--l~~fdr~ 978 (1704)
T KOG1835|consen 906 VHGLYAAFLRDVYPTRGERAGLESIRSRN---SAVAHLRALLVGSCDQSILTNILDILAKLSD--TENFMQ--LPNFDRN 978 (1704)
T ss_pred hhhhHHHHhhhhcCcccccchhHHhhcCc---hHHHHHHHHHhcCchHHHHHHHHHHHHHHhc--CCCccc--cCCcccc
Confidence 11 0110 000000 0011111 223334566667777666653 112222 3667888
Q ss_pred HHHHHhcCCCCCCCCCceeecCCCcccccHHHHHHHHHHhhhhccccccCCCchhhhhHHHHHHHHHHHHHHHHhhHHHH
Q 000295 973 LAEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQLSNFGSEAELNDVKEAIQQLLRWGWKYNKNLEE 1052 (1711)
Q Consensus 973 ~~~~~~~~c~~~~~g~~~~~~~~g~~l~di~~L~~~L~~e~~~~~~~~~~~~~~~~~~~~~~Ei~~iL~~~~~~N~~~~~ 1052 (1711)
.+.+++.+|+.. +.+|+--++..+++..|..+...+++.. +..+...+.+||..++.|.+.+|+..+.
T Consensus 979 ~l~~i~~~~e~~--------a~~~~~t~~~~~l~~~L~~~~~ll~s~~----s~~~~~~~~~~i~~Ll~l~~~in~v~~~ 1046 (1704)
T KOG1835|consen 979 KLLQILIETESS--------ARRIDVTRNSNKLTQVLTLELYLLDSRP----SKAQLKELYETISVLLGLGVVINRVLQF 1046 (1704)
T ss_pred hhhHHHHHhhcc--------chhhhhhhhhHHHHHHHHHHHHHHhhhh----hhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 889999999843 2333333566788888888877777542 3345566779999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---ccchhhHHHHHHHHHHHHhhccCCCccchHHHHHHHHHHHHHHHHhhhccccCCC
Q 000295 1053 QAAQLHMLTGWSQVVEVSVSRR---ISALGNRSEILYQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPG 1129 (1711)
Q Consensus 1053 ~~a~~~~L~aW~qLv~V~~s~~---~~~~~~r~~~Ild~L~~il~ki~~~~~~~~~a~~Ls~l~ltLl~~Lr~~~~~~~~ 1129 (1711)
..|+++++.+|.|+|+++++.| ..+++.|.++++++++.++.+..+.++-...+..+++++++++++++. .+...
T Consensus 1047 ~~a~~~fl~~w~qlve~~~S~m~~~l~~~~~rs~ii~~im~~vl~~~l~i~~~lc~~p~~s~~~ls~ia~l~~-~f~~~- 1124 (1704)
T KOG1835|consen 1047 VMAKLHFLASWSQLVESLFSLMPRLLSSITPRSKIIYDIMRSVLIAALEISPFLCSAPLTSEVVLSLIAKLRG-VFAVR- 1124 (1704)
T ss_pred hhhhHHHhcchhHHHHHHHHHhHHHhhhhcCCcchhhHhhHHHHHhhcCchHHHHhhhHHHHHHHHHHHhccc-ceehh-
Confidence 9999999999999999999877 456689999999999999999888888899999999999999999986 21110
Q ss_pred CCCCCCccchhhhhhhccccch----hHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhccCCCCchhhHHhhhh
Q 000295 1130 GLNSDSVTFLDVIMVKQLSNGA----CHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQHMLAPDVPTTVLQYLLL 1205 (1711)
Q Consensus 1130 ~~~~~~~~~~d~~~~~~L~~~~----~~~iL~~ll~~Il~~~ss~~lR~~lY~~l~~yLq~~~~~~~~~~~~~~~~~ll~ 1205 (1711)
.-..|+ ++++...-+.++... ...|++++++ -.+++++++.|.++|+..++|+|... .++-+.+..+.+..
T Consensus 1125 ai~~d~-~cft~~~i~~~~~~g~ss~l~~i~~~ll~-~~S~~~~r~~~~~ll~s~i~y~~~a~---~~de~~~yv~sLI~ 1199 (1704)
T KOG1835|consen 1125 AIVGDP-TCFTQVEISALSTGGHSSRLEKIVSALLR-SLSSLVSRRTQMNLLGSLIHYAQIAG---RSDEPLEYVASLIR 1199 (1704)
T ss_pred hhcCCc-ceeeccccccCCCCCcchhHHHHHHHHHH-hhhhhHHHHHHHHHHHhHHHHHHHhc---CCCcHHHHHHHHHH
Confidence 000111 111111111122222 3345555555 33445789999999999998877774 33445555666777
Q ss_pred ccccCcchhhhhhhhHHHHhHHHHHHHHHhhhhHHHHHHhhcccCCCcchHHHHHHHHHHHHcccCcchHHHHHHhcCcH
Q 000295 1206 DEQDGEDLDLQKIDKEQAELTHANFSTLRKEAQAILDLFIKDATQGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFL 1285 (1711)
Q Consensus 1206 ~~~~~~d~~~~~~~~~~~~l~~~~~~iI~~~ge~LidvIc~DA~~G~~~~r~~Al~lLd~Lv~ld~~~~il~~L~~~g~L 1285 (1711)
..++..+...++.+.....+++++..+|..+|+++++++|+||++||++|||.++.|+|.++.++..+.|+..+.+ ||+
T Consensus 1200 ~~e~~~~~el~q~~~~f~~L~~~n~~~I~~~~~~il~~~~~da~~g~~l~rml~l~~l~~i~~~~~~~~~m~~i~~-gy~ 1278 (1704)
T KOG1835|consen 1200 NAEVPRKLELLQPEDVFSDLARLNILIIACLGENILDTFCYDALYGHELGRMLILYVLDEISDFQKVQKLMLGILR-GYL 1278 (1704)
T ss_pred hhhccccchhcccchHHHHHHHhhhhhhccchhhhhhhhhccCccHHHHHHHHHHHHHhcchhHHHHHHHHHHHHH-HHH
Confidence 7778777888888888889999999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHHHHHhhhhhhhcccc-CcchhhHHHHHHHHHHHHHHHhhhcCcchHHHHHhcchhHHhhhcccccccCccccc----c
Q 000295 1286 RSCLMNVSNVSYQDGKR-SLDTLQRACTLEAELALLLRISHKYGKSGAQVLFSMGSLEHIASCKAVGLQGSLRRV----A 1360 (1711)
Q Consensus 1286 ~~lv~sl~~~~L~~~~~-~~~~l~~L~~yea~laLLlriAq~~tr~GA~~Ll~~gl~~~L~~~~~~~~~Pd~~~~----~ 1360 (1711)
+.+++|+.+..+++..+ -|+.++++ +|||+|+|++|||. .+.||..|+-.|+..+|++|.++|+.|+.... .
T Consensus 1279 ~~~l~Sl~~~s~~~~~s~l~~~l~~l-~~e~~~afltria~--~~~ga~~ll~~~A~~~l~~~~V~d~k~~~~~~s~fi~ 1355 (1704)
T KOG1835|consen 1279 AEILASLSESSLESKLSPLEDQLRAL-VYEAKMAFLTRIAH--IKRGALYLLILGAWGVLASCLVTDCKPEHSLVSMFIT 1355 (1704)
T ss_pred HHHHhhhhhhhhhhcccCchHHHHHH-HHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHhheeEeecCCCcchHHHHHH
Confidence 99999999778888888 88999999 99999999999999 89999999999999999999999999988642 3
Q ss_pred cCCCccCCchhhhhhhhhHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCChhhHHHHHH
Q 000295 1361 TKPRRALGGDIDRQRMIVTPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQENISEADELTMEQINL 1440 (1711)
Q Consensus 1361 ~~~~~~~p~~~~ry~~lL~PvlrL~~sv~~~~~s~G~~~~n~~~~~qv~~FL~~h~~li~~vLr~~~~~~~~~~Leel~l 1440 (1711)
.++..++|...+||++++.|+|.+|..++-+. + +++++++.+|.+|+..|++++.+++| .+.++..+++|..+
T Consensus 1356 ~~~~~~lP~i~d~~r~~l~p~l~l~s~i~~si---~--p~~~kav~~v~~f~~~h~~l~kt~lr--~~~~d~v~l~~v~l 1428 (1704)
T KOG1835|consen 1356 EVPGTFLPKILDRFREILLPALSLTSVILTSI---Q--PRDNKAVRDVGQFLKTHRDLFKTLLR--KNSMDTVHLQEVAL 1428 (1704)
T ss_pred hcccccCCcHHHHHHHHHHHHHHHHHHHHHhh---c--cchhHHHHHHHHHHHHHHHHHHHHHc--CCccchHHHHHHHH
Confidence 67888999999999999999999997765544 6 88999999999999999999999999 67789999999999
Q ss_pred HHHHHHhccccccCCchhhHHHHHHHHHHHhhhhhhhhh---c--ccC-cchhhhHH--hHHHHHHHHHhHHHHHHHHHH
Q 000295 1441 VVGILSKVWPYEESDEYGFVQGLFGMMSSLFSSDLENLT---F--SQS-ARSLENQR--KSELKKFQLCFSLSSYLYFMV 1512 (1711)
Q Consensus 1441 l~~ll~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~~~~---~--~~~-~~~~~~~~--~~~~~~~~i~~nl~~Y~r~~v 1512 (1711)
++|+++++++..+.+..|++|+++-.+.++| ..+.+ . +++ ...+...+ ..++...+||.|++.||+..+
T Consensus 1429 l~glis~~~s~de~d~~g~vq~l~lg~~~~f---~~s~~~~~~~~q~d~i~~d~~~k~~~~~~f~~~i~~~l~~~~~~~l 1505 (1704)
T KOG1835|consen 1429 LDGLISRVESSDEIDSEGRVQRLLLGSLKLF---PKSRPAAGIGLQNDLILEDLKSKLLICNLFLKQIVDNLLKYCLLLL 1505 (1704)
T ss_pred HHHHHhhccchhhhhhhhHHHHHHHHHHHHh---hccchhhhhccccCccchhhHHhHHHHHHHHHHHhHHHHHHHHHHh
Confidence 9999999999555555677766555555555 43311 1 222 12222221 355666889999999999999
Q ss_pred hhccccccccc---------ccCcCCCCcccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCChhhHHHHHh
Q 000295 1513 TKKSLRLQVSR---------SLDDYNTNSGLQQLTLTSLGSLLNSATAVLERAAEEKSLLLNKIRDINELSRQEVDEVIN 1583 (1711)
Q Consensus 1513 ~~~~~~~~~~~---------~~~~~~~~~~~~~p~l~~l~~~l~~~~~~~~~~~~~~~~~~~kl~~~~~L~~~e~~el~~ 1583 (1711)
+++++..+... .++..+-....+.+ ++..+-.+-+..+.++..+ -++-+|.+++||+-+
T Consensus 1506 ~s~s~~~~~al~llt~~~~~v~~~l~~~~~~~~~---v~~~Ir~~~~~~i~~ll~q---~d~v~~i~a~l~~~~------ 1573 (1704)
T KOG1835|consen 1506 DSSSKLSTAALLLLTTVLSDVTDLLYKSNYKKAT---VLHFIRRYGTREIGELLSQ---EDAVLEILAELENVI------ 1573 (1704)
T ss_pred hccchhHHHHHHHccccccchhhhhhHHHHHhhH---HHHHHHhhcchhHHHHHHh---hhhHHHHHhcCCCcc------
Confidence 99987764321 11111111235555 6666766777777777666 466666666666433
Q ss_pred hhcccccCCCchhHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcccc-hhhhhcccCCCCCc
Q 000295 1584 MCVREDYVSSSDNIQKRRYVAMVEMCQVAGNRDQLITLLLLLTEHVLNVILIHFQDSSIVSASSE-AMRTITYGAKSDSG 1662 (1711)
Q Consensus 1584 ~~~~~~~~~~~~~~~~~r~~a~~~l~~~~~~r~~~l~~~~~i~E~~L~ilw~Hl~~~~~~~~~~~-~~~~~~~~~~~~~~ 1662 (1711)
..++.-|++|+++++++. ++|++++.+|.|++|+|++|+|+|++++.+....-+ ...++...
T Consensus 1574 ---------~~p~~~kq~yl~~~~~~~--~n~~~l~~~~~f~~e~cl~~~w~hl~~~~l~~~~~~~~~~~~~i~------ 1636 (1704)
T KOG1835|consen 1574 ---------ELPKFLKQEYLKVKEVYV--NNRDALKLLVHFLAELCLKILWIHLSLYLLASVDRLGEVSQQLIS------ 1636 (1704)
T ss_pred ---------CCCcccchhhhhhHHHHH--hhHHHHHHHHHHHHHHHHHHHhccchhhcchhHHHHHHHHHHHHH------
Confidence 233356789999999988 999999999999999999999999999999433322 22222222
Q ss_pred hhhhhhhhhhhhhHHHhhhhcc--------------------------cccCchHHHHHHhhhchhH
Q 000295 1663 QDISLLSGKLIPILERLELLGE--------------------------DKVGRDLKVFRRLVTSLKE 1703 (1711)
Q Consensus 1663 ~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~ 1703 (1711)
..+...+||++++-++|-.+++ ++||+.+|.|+||+|+.+.
T Consensus 1637 ~~~~d~~~k~~~~~~~L~~l~~~~I~~f~e~l~~~~~d~k~~~sp~~~~~vg~~vk~i~~L~~~~~~ 1703 (1704)
T KOG1835|consen 1637 AEMEDETAKAIVSKDSLNLLKLLLIIDFDEDLLKLLEDAKGVYSPARRGFVGSLVKRIRRLLTLLRP 1703 (1704)
T ss_pred hhchhhhhhhhccHHHHHHHHHHHHHhhhHHHHHHHhcccccCCHHHHhhHHHHHHHHHHHHHhcCC
Confidence 2222266677776666655433 3789999999999998765
No 3
>KOG1835 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.95 E-value=3e-23 Score=270.43 Aligned_cols=1196 Identities=15% Similarity=0.104 Sum_probs=655.6
Q ss_pred CCccccccCCCCCCchhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHHHHHhccc-cccCCCC
Q 000295 1 MKELNREEPTGLGGPLCERYVLDSRGALVERRAVVYRERLILGHCLVLSVLVVRTSPKDVKDAFSALKDSAA-ELSENND 79 (1711)
Q Consensus 1 ~~~~~~~~~~~lg~~~~~~~v~~~~~~~~~~~~~~~~~r~~L~~~l~~~~~~~~~~~~d~~~ll~~Lk~~~~-~~~~~~d 79 (1711)
+++||||++-+|+|+...+.+.+..|...+| +...++..+..|+...-......++|+..-+..+.+..- ..+| .+
T Consensus 88 ~~~ln~~~~~~L~g~l~~q~~~~~~g~~~~~--v~l~~~l~l~~~lv~sil~~~~~~~di~~~l~~~~~~~~i~e~~-n~ 164 (1704)
T KOG1835|consen 88 IFQLNREDALLLRGQLAAQKLHFAGGNLDLY--VALRELLILLYALVTSILMLKEEREDIPTRLKIFLNSAFILENG-NK 164 (1704)
T ss_pred hhcccchhHHHHhhHHHHHHHHhcccchhHH--HHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHhHHHHHHHH-HH
Confidence 5789999999999999999999999999999 777889899999998887777788888666666655432 2222 23
Q ss_pred cchHHHHHHHHHHHHHhhhcccCCCCCccccccccchHHHHHHHHHHHcCCCCCCCcchhHHHHHHHHHHHHhhcch-hh
Q 000295 80 TLKHQITFSLLFSLVIAFISDALSTVPDKSSVLSRDASFRKEFHEIVMATGSDPIVEGFVGGVRLAWAVHLMLIHDE-IA 158 (1711)
Q Consensus 80 ~v~l~~~~~ll~a~~~s~~~~~~~~~~~~~~~~~~d~~~~~~l~~~l~~~~~~W~~~~l~a~v~laW~~~l~~~~~~-~~ 158 (1711)
-+.=.++....+...+.+..+--+..-.+++....+.+|.+..++.+..... - .+|-+.....|.++|.-..+. ..
T Consensus 165 l~~qqi~~~p~l~~~v~~~~~~~l~~~~~~~~i~~~~~f~~~~de~~v~e~~-~--~~f~~~~~~~~~~hLf~~~~f~~~ 241 (1704)
T KOG1835|consen 165 LLFQQIWFFPVLSLIVRLILPLILGLLGSKSQILQRAAFIEIRDEVHVSELD-I--NVFPGINYLLASVHLFQIVKFVIR 241 (1704)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhh-c--ccchhhhhHHHHHHHHHHHHHHHH
Confidence 4555677777776667676663333334455557778888887777766542 2 678899999999998864443 11
Q ss_pred hhhhcCCCCchhhHHHHHHHHHHHhcCcHHHHHHHHHhc-cCCCCCchhH------------------------------
Q 000295 159 ARETVSSSSSSELSNIRSCLETIFSNNVFQFLLDKALRT-AAYQNDDEDM------------------------------ 207 (1711)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~Al~~~vF~Fl~~~ll~~-~~~~~~~~~~------------------------------ 207 (1711)
.-....+.+-++.......+.--.+..+|+|+..-++.+ +..+-.+..+
T Consensus 242 ~v~ll~T~f~~~m~~~~s~l~~~~~~~i~~vl~~~~~~~~~~~~lr~~~~~~ml~l~~~~~~~p~~~~~~~e~~~~~~p~ 321 (1704)
T KOG1835|consen 242 RVHLLITAFIDDMKIKSSELLPRADADIFQVLTNMILGIEPPPQLRSNAMCLMLQLAEAVTSKPIAGSLSDELWIPNDPV 321 (1704)
T ss_pred HHHHHHHHHHHhcccchHHhhhhHHHHHHHHHHHHhcccCCCcccchhHHHHHHHHHHHhcCCccccchhHHhcCCCCch
Confidence 101111122233334444444445556666666554444 2222110000
Q ss_pred -------------HH-H---------------HHHHHHHHHHHHhhhhhhHHHHHHHHH-HH--------------Hhhh
Q 000295 208 -------------VY-M---------------NNAYLHKLITCFLSHQLARDKVKESKD-KA--------------MSVL 243 (1711)
Q Consensus 208 -------------~~-f---------------~~~~lh~li~~fI~~~~m~~kvk~lr~-~~--------------de~~ 243 (1711)
.+ | +...+..+++..+. +.|.|..|... .+ .-.+
T Consensus 322 ~v~~~~~~s~~~~l~sfl~~a~~~l~~t~~~~~~ki~s~l~~~~~~--~~p~~~~e~~~g~gv~W~~ff~~~~~y~~~~r 399 (1704)
T KOG1835|consen 322 IVERVKDRSRRVVLFSFLRQAIDLLPHTNYIHQLKIFSGLTTSLLS--YFPAKLVETERGNGVSWLHFFDSLRSYQTTTR 399 (1704)
T ss_pred hhHhhhhhhHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHHH--hcchhhhhhhccCCccchhhhhhHhhhhHHhh
Confidence 00 0 11124444443333 33444433222 11 0000
Q ss_pred hhhhh--------------------------------------ccCcccccCCCCCCCCCC---CCC------CCcHHHH
Q 000295 244 NSYRI--------------------------------------AGSHDFVHDSNLPSQQDT---EIG------PLPFVSL 276 (1711)
Q Consensus 244 ~~~r~--------------------------------------~~~~~~~~d~~~~~~~~~---~~~------~~dlE~f 276 (1711)
++.++ ...|+--+.+ ..-.|. +++ ...+++|
T Consensus 400 ~~~~~~~~~i~~~l~t~~Q~~~~~l~a~l~vlq~iie~~~~~~~c~~p~~ep~--~~llg~~~~~p~~lk~eL~~tlaaf 477 (1704)
T KOG1835|consen 400 KDLPPAGSTIYRTLKTIAQKEVSYLVAFLNVLQTIIEEDERFLLCFHPDWEPQ--VVLLGYQCNIPTYLKAELLKTLAAF 477 (1704)
T ss_pred ccCCCcccceeeecchHHHHHHhhchhHHHHHHHHHhhchHHHhcCCCccccc--hhhhccccccchHHHHHHHHHHHHH
Confidence 00001 0000000000 011111 111 4556777
Q ss_pred H--HHHHHHhccCcccccccccch----------hHHHHhhccCCCcchHHHHHHHHHHhcCCchhHHHHHHHhcCCCCC
Q 000295 277 L--EFVSEIYQKEPELLSGNDVLW----------TFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVYELLQGKAFR 344 (1711)
Q Consensus 277 l--l~ia~~Y~~~P~~~~~~~~fW----------gFl~wa~~~~~~~~~~~afl~ML~sLa~g~e~A~~~~~~L~~~~~~ 344 (1711)
. ..|-+.|+.+|..-. ..+| +|.+|-+++-.+|.+.+.+++|-+||.-|++.|.+.|+..-.. .
T Consensus 478 ~~a~siw~~lE~~~~~~~--v~v~s~~~q~~i~~e~~eiear~cky~lTrs~lyli~sslgag~~v~l~gy~ray~~--~ 553 (1704)
T KOG1835|consen 478 SMAFSIWFFLESCQLLET--VRVWSSHQQISIIVEFNEIEARVCKYNLTRSFLYLIFSSLGAGPSVALKGYDRAYRE--P 553 (1704)
T ss_pred HHHHHHHHHHHhccccee--eecCcccchhHHHHHHHHHHHHHhcCccHHHHHHHHHHhhccCchhHHHHHHHHhhc--c
Confidence 7 555666666666541 2466 6888877732446777777777778888888888888666554 5
Q ss_pred cccHHHHHHHHHHHHHHhhhccccCCC----C-CCC------CChhhHHHHHHHHHHHHHHHhcCcc-----cc-ccccC
Q 000295 345 SIGWRTLFDCLSIYDEKFKQSLQTGGA----L-LPD------FQEGDAKALVAYLNVLQKVMENGNS-----IE-RKNWF 407 (1711)
Q Consensus 345 ~vSW~~iF~~L~~Y~~~l~~~~~~~~~----~-~~~------~~~ee~~~L~a~L~Li~~V~~~~~~-----~e-~~~w~ 407 (1711)
+-+|..++++++.|+..++.-.++..+ + .|+ ...++.....++.-+.++|.+-+.. ++ .+.|.
T Consensus 554 sekW~~~~~clq~~~~~Ls~y~~q~~d~~~f~e~pgf~I~~~lq~~s~liela~~im~s~v~~ld~~~~~q~~~~~~~~l 633 (1704)
T KOG1835|consen 554 SEKWQVIAQCLQSYTMLLSTYFPQLEDLLQFTERPGFKIDIPLQLESGLIELALIIMESSVLRLDEYAAFQFKEDEKSSL 633 (1704)
T ss_pred cHhHHHHHHHHHHHHHHhcccchhhhhhhccccCCccccchhhhhhhhHHHHHHHHHHHHHHHHhhhccccccccccccH
Confidence 899999999999999999984332211 1 222 2234444444554566677666552 21 23443
Q ss_pred CChHHHHHhccCC---CCChhHHHHHHHHHH-HhhhcChhhHHHHHHHHh-hccCCCccccCCCCCCcccCCcccchHHH
Q 000295 408 PDIEPLFKLLSYE---NVPPYLKGALRNAIA-ACIHVSLVMKDNIWRLLE-QYDLPVVVGTHVGNTAQPIAGQVYDMQFE 482 (1711)
Q Consensus 408 ~~i~~Lf~Ll~~~---~VP~~LKa~i~~tLa-al~~~s~~~a~~iW~~Ld-~~~~~~~~~~~~~~~~~~~~~~~~gi~~e 482 (1711)
..+++..+.+. ++|..++++.++.|. +++++-...++++|..++ -.++..+. .|. -..+...+
T Consensus 634 --~~~~~~~L~~~~~~sv~~~l~~a~~~Ll~~~l~r~L~~~npr~wsadhv~ni~~y~~---~g~-------lp~~~~~~ 701 (1704)
T KOG1835|consen 634 --SKTLVLSLELAKQNSVPILLVAAMLDLLVSALARKLKGSNPRIWSADHVLNILKYSS---DGG-------LPMGAQAA 701 (1704)
T ss_pred --HHHHHHHHHhccchhHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHhhhhh---cCC-------chHhHHHH
Confidence 44556555432 389999999999999 888866778899999999 44443332 111 11233555
Q ss_pred HHHHhhhccCCcchHHHHHHHHHhhcCCC------------------CCCCCccc----cchhHHHHHhh--------hh
Q 000295 483 LNEIEARREQYPSTISFLNLLNALIAEEK------------------DVSDRGRR----FVGIFRFVYDH--------VF 532 (1711)
Q Consensus 483 l~eiE~~~~~Yp~T~aFl~LL~~Li~~~~------------------~~lg~g~R----~~py~~FV~~~--------VF 532 (1711)
.+..++-.-.|... .+++.+.++...-. ..++.++| +++|++..++. +.
T Consensus 702 ikil~~vs~~~~v~-~Lv~~l~~~~~~~el~~~fv~cl~~~~r~e~g~~le~~~~~lg~I~~l~~~~~~~~~p~v~~~ll 780 (1704)
T KOG1835|consen 702 IKILECVSCVYNVG-QLVKNLITLLMSRELPEGFVECLEEVTRLEEGLVLEFSPRSLGSIVQLFELNLNSLLPNVVLLLL 780 (1704)
T ss_pred HHHHHHhcccccHH-HHHHHHHHHHHHHhhHHHHHHHHHHHhcchhHHHhhcchHHHHHHHHHHHhhccccCcchHHHhh
Confidence 55566656666655 55555555333210 11345555 34443333222 22
Q ss_pred CCCCccccCCchhHHHHHHHHHHHHHHHHhcccCCchhhhhhhhcCCCcCCCCccccc---Cc--HHHHHHHhccChHHH
Q 000295 533 GPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLTQSSPIQMQ---LP--VLELLKDFMSGKAVF 607 (1711)
Q Consensus 533 ~~~~~r~Y~~~~ekw~l~~~cL~~f~~~L~~y~~~~edl~~~~~~~~~~~~~~~l~~y---~P--~~~vm~~~L~~~~v~ 607 (1711)
+-..+|+...+.-+-.+.-+||.-+-..|..+.....+++-... .+++++| +| ...+|+ +|+.++.+
T Consensus 781 g~~~~r~v~~~~lqI~~~~sCl~~il~mLeki~~~~~~~~~~e~-------~~~l~~~l~~~p~tA~p~lr-yL~t~~~~ 852 (1704)
T KOG1835|consen 781 GIDLKRAVMSNVLQIAIQYSCLNDILAMLEKIPRVSINEDLQEH-------NYNLFTYLCACPDTAIPILR-YLSTEKAY 852 (1704)
T ss_pred hcccchhhhccCcchhhHHHHHHHHHHHHHhCCccccchhHHHH-------hhhhhhhccCCccchHHHHH-HHHHHHHH
Confidence 22234444444445666777887777777776543111111111 1556666 57 557888 99999999
Q ss_pred HHHHHhhccchhhHhhhhccCccChHHHHHHHHHHHHHHHHHhhhhhhhhhhcccccc-------------hhh------
Q 000295 608 RNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFEKDLLLSDFWRPLYQP-------------VDV------ 668 (1711)
Q Consensus 608 ~~l~~ii~~Gvd~l~~e~~~~~y~~~l~~~vl~aL~Il~~vL~~q~~f~d~lrpi~~~-------------ld~------ 668 (1711)
..+++....|++.+...... +.+....+...+.|..+++++|.-|.+ +-|.+.. .++
T Consensus 853 fll~~L~~~gf~ql~~~~i~---~lnq~~~l~k~~ai~~~vlsl~~~~sh-l~~~~~~h~~~~~~l~d~~p~~g~~ag~~ 928 (1704)
T KOG1835|consen 853 FLLFHLVALGFDQLSEIMIS---SLNQVSWLPKLLAIALTVLSLQRHYSH-LFPDELVHGLYAAFLRDVYPTRGERAGLE 928 (1704)
T ss_pred HHHHHHHHhCccccHHHHhc---cchHHHHHHHHHHHHhccchHHHHHHh-ccchhhhhhhHHHHhhhhcCcccccchhH
Confidence 99999999999998443332 345566778888999999999885433 3332111 111
Q ss_pred hhccCchHHHHHH-hhhccCCcchhHHHHHHHHHHHhhhh-----h-----hHHHHHhhhchhHHHHHHH-HHHhccccc
Q 000295 669 ILSQDHNQIVALL-EYVRYDFLPQIQQCSIKIMSILSSRM-----V-----GLVQLLLKYNAASSLVEDY-AACLELRSE 736 (1711)
Q Consensus 669 lLs~~~~~I~~L~-~Yv~~~~~p~lal~SikIL~~ls~r~-----~-----~lv~~l~~~~es~~I~~~F-v~~Le~~~~ 736 (1711)
.+..+.+.|+|++ .|+|..+ ..+...++.||.+.+.+- + .+.+++....+++++.+.+ ....+..
T Consensus 929 ~i~~~n~~vahl~~l~~~~~~-~~~~~~ildiL~~~~~~~~~~~l~~fdr~~l~~i~~~~e~~a~~~~~t~~~~~l~~-- 1005 (1704)
T KOG1835|consen 929 SIRSRNSAVAHLRALLVGSCD-QSILTNILDILAKLSDTENFMQLPNFDRNKLLQILIETESSARRIDVTRNSNKLTQ-- 1005 (1704)
T ss_pred HhhcCchHHHHHHHHHhcCch-HHHHHHHHHHHHHHhcCCCccccCCcccchhhHHHHHhhccchhhhhhhhhHHHHH--
Confidence 1224667899999 9999988 688888999999987221 1 1556665555544444422 1111111
Q ss_pred cccccccCCCChHHHHHHHHHhccC--CCCChHHHhh-hCCccCCCCccccccCC------CCcchHHHHHHHHHhcCC-
Q 000295 737 ESQIIEKSGDDPGVLIMQLLIDNIS--RPAPNITHLL-LKFDLDTPIERTVLQPK------FHYSCLKIILEILEKVSK- 806 (1711)
Q Consensus 737 d~~~~e~~~~~~k~~IL~lLl~nL~--~~~PnlAHlL-LGFdv~~~~~~~~l~p~------~~~ScLhsIL~lL~~~~~- 806 (1711)
-...++..++++..+.. .-.-++.|+| +||.+.+- ...++. +-..++.+++..+.....
T Consensus 1006 --------~L~~~~~ll~s~~s~~~~~~~~~~i~~Ll~l~~~in~v---~~~~~a~~~fl~~w~qlve~~~S~m~~~l~~ 1074 (1704)
T KOG1835|consen 1006 --------VLTLELYLLDSRPSKAQLKELYETISVLLGLGVVINRV---LQFVMAKLHFLASWSQLVESLFSLMPRLLSS 1074 (1704)
T ss_pred --------HHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHH---HHhhhhhHHHhcchhHHHHHHHHHhHHHhhh
Confidence 01122333444433332 1234667777 77776551 111121 224566666666665432
Q ss_pred --CC----Cc--hhHHHHHHHHHHHhhcCCCCcHHHHHHHhccccchHHHhhhhcC-CCCCCCCCC------c-hh----
Q 000295 807 --PD----VN--ALLHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDAIG-VAPLPKRNS------N-QA---- 866 (1711)
Q Consensus 807 --~~----~~--p~L~e~~~~lL~~Lc~~p~TS~~tL~~LR~~~~dff~~~L~~~~-i~~l~~~~~------~-~~---- 866 (1711)
++ .. -...-++.++.-.||.+|.||+.++.+++..+.-|+.+.+..+| | ++.|.+ . .+
T Consensus 1075 ~~~rs~ii~~im~~vl~~~l~i~~~lc~~p~~s~~~ls~ia~l~~~f~~~ai~~d~~c--ft~~~i~~~~~~g~ss~l~~ 1152 (1704)
T KOG1835|consen 1075 ITPRSKIIYDIMRSVLIAALEISPFLCSAPLTSEVVLSLIAKLRGVFAVRAIVGDPTC--FTQVEISALSTGGHSSRLEK 1152 (1704)
T ss_pred hcCCcchhhHhhHHHHHhhcCchHHHHhhhHHHHHHHHHHHhcccceehhhhcCCcce--eeccccccCCCCCcchhHHH
Confidence 11 11 12257888999999999999999999999876227777666666 3 333332 1 11
Q ss_pred ---H---HHHHHHHHHHHHHHHHHHHHhhcCCCcchhHHHHHHHHhhcCCCccCCCCcccccccccccccccccccccch
Q 000295 867 ---L---RISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLFGRDHIEDTDRTLSLPFMVQNITEHAGTRTISK 940 (1711)
Q Consensus 867 ---~---~~s~L~~rs~lL~~~AlEL~~~~~~~s~~~~~~~~ll~~L~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 940 (1711)
+ ..+++.+|...+++.+.++|.+... ++.+....|+..|+-+.... ..... ..+
T Consensus 1153 i~~~ll~~~S~~~~r~~~~~ll~s~i~y~~~a--~~~de~~~yv~sLI~~~e~~-------~~~el-----------~q~ 1212 (1704)
T KOG1835|consen 1153 IVSALLRSLSSLVSRRTQMNLLGSLIHYAQIA--GRSDEPLEYVASLIRNAEVP-------RKLEL-----------LQP 1212 (1704)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHhHHHHHHHh--cCCCcHHHHHHHHHHhhhcc-------ccchh-----------ccc
Confidence 1 2367779999999999999999542 34456678888888432111 00111 123
Q ss_pred hhhhhhhccccCCCCCchhh-hhhhh-h-hcchhhHHHHHhcCCCCCCCCCceeecCCCcccccHHHHHHHHH-------
Q 000295 941 SKVLELLEVVQFRSPDTAMK-LSQIV-S-NMKYDLLAEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLW------- 1010 (1711)
Q Consensus 941 ~~il~lLd~l~F~~~d~~~~-~p~~~-~-~~~~~~~~~~~~~~c~~~~~g~~~~~~~~g~~l~di~~L~~~L~------- 1010 (1711)
...+..|+.+|+...+.... .-..+ . ..........+...|. + ...|+.+..+.+.
T Consensus 1213 ~~~f~~L~~~n~~~I~~~~~~il~~~~~da~~g~~l~rml~l~~l----~----------~i~~~~~~~~~m~~i~~gy~ 1278 (1704)
T KOG1835|consen 1213 EDVFSDLARLNILIIACLGENILDTFCYDALYGHELGRMLILYVL----D----------EISDFQKVQKLMLGILRGYL 1278 (1704)
T ss_pred chHHHHHHHhhhhhhccchhhhhhhhhccCccHHHHHHHHHHHHH----h----------cchhHHHHHHHHHHHHHHHH
Confidence 35566666666655432221 00000 0 0000000011111221 1 1223322222111
Q ss_pred Hh-hhhccccccCCCchhhhhH----HHHHH-HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHH
Q 000295 1011 KK-LNIVYPQLSNFGSEAELND----VKEAI-QQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISALGNRSEI 1084 (1711)
Q Consensus 1011 ~e-~~~~~~~~~~~~~~~~~~~----~~~Ei-~~iL~~~~~~N~~~~~~~a~~~~L~aW~qLv~V~~s~~~~~~~~r~~~ 1084 (1711)
++ ...+.. ++.+++.. ...+. -+-...+..++++...-+.-+-.+.||.++.+..|++|......+..+
T Consensus 1279 ~~~l~Sl~~-----~s~~~~~s~l~~~l~~l~~e~~~afltria~~~~ga~~ll~~~A~~~l~~~~V~d~k~~~~~~s~f 1353 (1704)
T KOG1835|consen 1279 AEILASLSE-----SSLESKLSPLEDQLRALVYEAKMAFLTRIAHIKRGALYLLILGAWGVLASCLVTDCKPEHSLVSMF 1353 (1704)
T ss_pred HHHHhhhhh-----hhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhheeEeecCCCcchHHHH
Confidence 11 111110 01111111 11222 333455566666655556667779999999999999998888888999
Q ss_pred HHHHHHHHhhccCCCccchHHHHHHHHHHHHHHHHhhhccccCCCCCCCCCccchhhhhhhccccchhHHHHHHHHHHHh
Q 000295 1085 LYQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPGGLNSDSVTFLDVIMVKQLSNGACHSLLFKLIMAIL 1164 (1711)
Q Consensus 1085 Ild~L~~il~ki~~~~~~~~~a~~Ls~l~ltLl~~Lr~~~~~~~~~~~~~~~~~~d~~~~~~L~~~~~~~iL~~ll~~Il 1164 (1711)
+.+..+..+|++.+. ...-+...++-+.+.+.+..-++ .....|+.. +. .+ ...+++.++
T Consensus 1354 i~~~~~~~lP~i~d~-~r~~l~p~l~l~s~i~~si~p~~-----------~kav~~v~~---f~-~~----h~~l~kt~l 1413 (1704)
T KOG1835|consen 1354 ITEVPGTFLPKILDR-FREILLPALSLTSVILTSIQPRD-----------NKAVRDVGQ---FL-KT----HRDLFKTLL 1413 (1704)
T ss_pred HHhcccccCCcHHHH-HHHHHHHHHHHHHHHHHhhccch-----------hHHHHHHHH---HH-HH----HHHHHHHHH
Confidence 999999999998774 22333333443333222222221 011122111 00 01 122233333
Q ss_pred c--CCCCHHHHHHHHHHHHHHHHHHhhccCCCCchhhHHhhhhccccCcchhhhhhhhHHHHhHHHHHHHHHhhhhHHHH
Q 000295 1165 R--NESSEALRRRQYALLLSYFQYCQHMLAPDVPTTVLQYLLLDEQDGEDLDLQKIDKEQAELTHANFSTLRKEAQAILD 1242 (1711)
Q Consensus 1165 ~--~~ss~~lR~~lY~~l~~yLq~~~~~~~~~~~~~~~~~ll~~~~~~~d~~~~~~~~~~~~l~~~~~~iI~~~ge~Lid 1242 (1711)
+ +-++..++...|..- |++-+.. .+ +.++++ ..++.-. .--+++.
T Consensus 1414 r~~~~d~v~l~~v~ll~g--lis~~~s------~d---------e~d~~g-----------~vq~l~l-----g~~~~f~ 1460 (1704)
T KOG1835|consen 1414 RKNSMDTVHLQEVALLDG--LISRVES------SD---------EIDSEG-----------RVQRLLL-----GSLKLFP 1460 (1704)
T ss_pred cCCccchHHHHHHHHHHH--HHhhccc------hh---------hhhhhh-----------HHHHHHH-----HHHHHhh
Confidence 3 225566666666544 2222211 00 001100 0111111 1112333
Q ss_pred HHhhcccCCCcchHHHHHHHHHHHHcccC--cchHHHHHHhcCcHHHHHH---Hh-----hhh-hhh---cccc-Ccchh
Q 000295 1243 LFIKDATQGSEPGKTLSLYVLDALICIDH--EKYFLNQLQSRGFLRSCLM---NV-----SNV-SYQ---DGKR-SLDTL 1307 (1711)
Q Consensus 1243 vIc~DA~~G~~~~r~~Al~lLd~Lv~ld~--~~~il~~L~~~g~L~~lv~---sl-----~~~-~L~---~~~~-~~~~l 1307 (1711)
..-+++..|...-. +..|. ....++++.+.++-..+-. .+ ..+ .+. .... ..+.+
T Consensus 1461 ~s~~~~~~~~q~d~----------i~~d~~~k~~~~~~f~~~i~~~l~~~~~~~l~s~s~~~~~al~llt~~~~~v~~~l 1530 (1704)
T KOG1835|consen 1461 KSRPAAGIGLQNDL----------ILEDLKSKLLICNLFLKQIVDNLLKYCLLLLDSSSKLSTAALLLLTTVLSDVTDLL 1530 (1704)
T ss_pred ccchhhhhccccCc----------cchhhHHhHHHHHHHHHHHhHHHHHHHHHHhhccchhHHHHHHHccccccchhhhh
Confidence 33344444444433 11111 1122222222222111111 11 111 111 1111 34788
Q ss_pred hHHHHHHHHHHHHHHHhhhcCcchHHHHHh-cchhHHhhhcccccccCc
Q 000295 1308 QRACTLEAELALLLRISHKYGKSGAQVLFS-MGSLEHIASCKAVGLQGS 1355 (1711)
Q Consensus 1308 ~~L~~yea~laLLlriAq~~tr~GA~~Ll~-~gl~~~L~~~~~~~~~Pd 1355 (1711)
+..+..++.+..++|... |+.++..|.+ ..++++++++.++...|.
T Consensus 1531 ~~~~~~~~~v~~~Ir~~~--~~~i~~ll~q~d~v~~i~a~l~~~~~~p~ 1577 (1704)
T KOG1835|consen 1531 YKSNYKKATVLHFIRRYG--TREIGELLSQEDAVLEILAELENVIELPK 1577 (1704)
T ss_pred hHHHHHhhHHHHHHHhhc--chhHHHHHHhhhhHHHHHhcCCCccCCCc
Confidence 889999999999999999 8999999999 899999999999999985
No 4
>PF10487 Nup188: Nucleoporin subcomplex protein binding to Pom34; InterPro: IPR018864 This is one of the many peptides that make up the nucleoporin complex (NPC), and is found across eukaryotes []. The Nup188 subcomplex (Nic96p-Nup188p-Nup192p-Pom152p) is one of at least six that make up the NPC, and as such is symmetrically localised on both faces of the NPC at the nuclear end, being integrally bound to the C terminus of Pom34p [].
Probab=99.75 E-value=1.2e-14 Score=193.58 Aligned_cols=649 Identities=19% Similarity=0.230 Sum_probs=385.7
Q ss_pred CCCchhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHh--------cccCChhhHHHHHHHHHhccc--------ccc
Q 000295 12 LGGPLCERYVLDSRGALVERRAVVYRERLILGHCLVLSVL--------VVRTSPKDVKDAFSALKDSAA--------ELS 75 (1711)
Q Consensus 12 lg~~~~~~~v~~~~~~~~~~~~~~~~~r~~L~~~l~~~~~--------~~~~~~~d~~~ll~~Lk~~~~--------~~~ 75 (1711)
.|+...+..+..|+ ..| .++...|.+.++++.. .+.+.|+|+..+.+.+|+.+- +.+
T Consensus 167 ~~~~~~~~~~~~~~------~~~-~~~~~~ll~i~~l~~~~~~~~v~~wf~~~~~el~~~~~l~~~~~f~~~~~~~~~~~ 239 (931)
T PF10487_consen 167 HGDELTELKYSEWL------LFC-LRELKELLEILFLNSNVPKSIVSKWFEMSPNELVRLFKLMKSTNFGGRFQSRHDSS 239 (931)
T ss_pred hhhHHHHHHHHHHH------HHH-HHHHHHHHHHHHhcccCCccHHHHHhhcccchhHHHHHHHHhcCCcchhhhhhcch
Confidence 37777777777774 122 6677778899998886 567889999999999999852 111
Q ss_pred CCCCcchHHHHHHHHHH------HHHhhhcccCCCCCccccccccchHHHHHHHHHHHcCCCCCCCcchhHHHHHHHHHH
Q 000295 76 ENNDTLKHQITFSLLFS------LVIAFISDALSTVPDKSSVLSRDASFRKEFHEIVMATGSDPIVEGFVGGVRLAWAVH 149 (1711)
Q Consensus 76 ~~~d~v~l~~~~~ll~a------~~~s~~~~~~~~~~~~~~~~~~d~~~~~~l~~~l~~~~~~W~~~~l~a~v~laW~~~ 149 (1711)
..++ .+..-+..+.+ ++.+...+.. ..+..-|.+.|++..+++|+.+.++. +.+++|.++|++.
T Consensus 240 e~~~--~l~~~i~~l~~visl~~ldL~~~~~~~--~~~~~~~~~~d~~~~~~i~~~i~~~~------~~~~pvl~aWs~i 309 (931)
T PF10487_consen 240 ESHS--ELIERIQSLFSVISLEFLDLDNSFDSA--LIDSSEPYFNDPEVFKEINDAILNDS------PENSPVLYAWSII 309 (931)
T ss_pred hhHH--HHHHHHHHHHHHHHHHHhCcchhhccc--cCCCccchhcCcHHHHHHHHHHhcCC------CCCchHHHHHHHH
Confidence 1111 11222222222 2222221101 11334488999999999999998743 2459999999999
Q ss_pred HHhhcchhhhhhhcCCCCchhhHHHHHHHHHHHhcCcHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHHHhhhhhhH
Q 000295 150 LMLIHDEIAARETVSSSSSSELSNIRSCLETIFSNNVFQFLLDKALRTAAYQNDDEDMVYMNNAYLHKLITCFLSHQLAR 229 (1711)
Q Consensus 150 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Al~~~vF~Fl~~~ll~~~~~~~~~~~~~~f~~~~lh~li~~fI~~~~m~ 229 (1711)
+...+-.-.+. +-..+.-..-+..+..+|.+.|||+.|.. +.+...+. . .+-+.+..+++--+. +
T Consensus 310 l~~k~~~~~e~---~~~~~~~~~~i~~~~~~a~~l~Vf~~l~~-l~~~l~~d--~-----~~~ails~~~~~s~~--~-- 374 (931)
T PF10487_consen 310 LHRKSYLLEED---PFNDEDVSSVIRQLASRAEQLNVFEYLSR-LSESLSFD--S-----IYSAILSSFITLSLP--F-- 374 (931)
T ss_pred HHHHHHHhhhc---CCCcccHHHHHHHHHHHHhhcCHHHHHHH-HHHhcccc--h-----HHHHHHHHHHHHhcc--e--
Confidence 98744321110 11112222456777999999999999995 56654333 2 344444443332110 1
Q ss_pred HHHHHHHHHHHhhhhhhhhccCcccccCCCCCCCCCCCCCCCcHHHHHHHHHHHhccCccccc---ccccch-hHHHHhh
Q 000295 230 DKVKESKDKAMSVLNSYRIAGSHDFVHDSNLPSQQDTEIGPLPFVSLLEFVSEIYQKEPELLS---GNDVLW-TFVVFAG 305 (1711)
Q Consensus 230 ~kvk~lr~~~de~~~~~r~~~~~~~~~d~~~~~~~~~~~~~~dlE~fll~ia~~Y~~~P~~~~---~~~~fW-gFl~wa~ 305 (1711)
+. | . ..+..++..++.+-|+... ...++| ..+..|.
T Consensus 375 -------------------v~---~-------------t-----~~~~~~i~~vl~~~p~~~~e~fl~n~~~~~~~~~ar 414 (931)
T PF10487_consen 375 -------------------VP---L-------------T-----PETSSCIKSVLSAAPNVLVEKFLTNEFFENEFDIAR 414 (931)
T ss_pred -------------------ee---e-------------c-----HHHHHHHHHHHHhchHhhhccccccHHHHHHHHHHH
Confidence 00 0 0 1344567777777665432 225666 3667677
Q ss_pred ccCCCcchHHHHHHHHHHhcCCchhH---HHHHHHhcCCCCCcccHHHHHHHHHHHH--H--Hhhhcc---c--------
Q 000295 306 EDHTNFQTLVAFLKMLSTLASSQEGA---SKVYELLQGKAFRSIGWRTLFDCLSIYD--E--KFKQSL---Q-------- 367 (1711)
Q Consensus 306 ~~~~~~~~~~afl~ML~sLa~g~e~A---~~~~~~L~~~~~~~vSW~~iF~~L~~Y~--~--~l~~~~---~-------- 367 (1711)
.+. |..+.||+++ ++..++.+. ..++.|+.........|++.=....... + ++.+.. +
T Consensus 415 arf--P~e~~P~l~L--a~i~~~~a~~e~~~l~s~~~~~~~~~~~Y~~~~~~~~~~en~~li~l~~~~~~~p~~e~~~~~ 490 (931)
T PF10487_consen 415 ARF--PYELLPFLKL--ALISGEFANFELKELKSYTQKLPEFFQDYDLIDEDIIEDENTDLIKLTQDLLLYPPFEQSNKI 490 (931)
T ss_pred HhC--CHhHHHHHHH--HHcCcchhHHHHHHHHHHHHhCCCcccccccccccccccCCcchhhcccccccCCCCCCCCCe
Confidence 765 7779999998 445555433 3666666433222222321100000000 0 011100 0
Q ss_pred ----cCCC---C---------------------------------CCCCChhhHHHHHHHHHHHHHHHhcCcccccc---
Q 000295 368 ----TGGA---L---------------------------------LPDFQEGDAKALVAYLNVLQKVMENGNSIERK--- 404 (1711)
Q Consensus 368 ----~~~~---~---------------------------------~~~~~~ee~~~L~a~L~Li~~V~~~~~~~e~~--- 404 (1711)
|+|. + .-++.....+.+...+.|++.|++.+...+..
T Consensus 491 ~~~IP~gT~G~iv~~~~~~~~vV~w~~~ysgw~lLG~~Le~~~~~~~~~d~~~~~~v~~ii~Ll~~l~~~~~~~~~~~~i 570 (931)
T PF10487_consen 491 SLVIPAGTKGKIVSDSGPDEVVVMWEYEYSGWALLGRWLENLLKSYSELDSLQDERVAEIIDLLASLLSSDNSIEDSKEI 570 (931)
T ss_pred eEEeCCCCEEEEEeCCCCCceEEEEeecchHHHHHHHHHHHHHhcccccCcchHHHHHHHHHHHHHHHccCcchhHHHHH
Confidence 0000 0 01233455588889999999999554421110
Q ss_pred --------ccCCChHHHHHhc--cCCCCChhHHHHHHHHHHHhhhcChhhHHHHHHHHhhccCCCccccCCCCCCcccCC
Q 000295 405 --------NWFPDIEPLFKLL--SYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQPIAG 474 (1711)
Q Consensus 405 --------~w~~~i~~Lf~Ll--~~~~VP~~LKa~i~~tLaal~~~s~~~a~~iW~~Ld~~~~~~~~~~~~~~~~~~~~~ 474 (1711)
.-..++++.|.++ +...-|..+..+|++.|+|+++..| ..||..|-++.+....+ +.|-
T Consensus 571 L~~~S~~l~~~DIisvI~~ile~~L~~~~v~ll~scl~fL~aL~p~~p---~rVW~~L~rS~LL~~~g-~~G~------- 639 (931)
T PF10487_consen 571 LEEASAYLDHSDIISVIFDILERSLQSRNVELLTSCLRFLTALLPIFP---GRVWSYLSRSSLLGSDG-KGGL------- 639 (931)
T ss_pred HHHHhhccccCcHHHHHHHHHHHHcccCChHHHHHHHHHHHHHhccCh---HHHHHHHhhCcCcccCC-ccch-------
Confidence 1124677888776 2245789999999999999998545 89999999988753311 1110
Q ss_pred cccchHHHHHHHhhhccCCcchHHHHHHHHHhhcCCCC-CCCCccc----cchhHHHHHhhhhCCCCccccCCchhHHHH
Q 000295 475 QVYDMQFELNEIEARREQYPSTISFLNLLNALIAEEKD-VSDRGRR----FVGIFRFVYDHVFGPFPQRAYADPCEKWQL 549 (1711)
Q Consensus 475 ~~~gi~~el~eiE~~~~~Yp~T~aFl~LL~~Li~~~~~-~lg~g~R----~~py~~FV~~~VF~~~~~r~Y~~~~ekw~l 549 (1711)
....+-.+|...+.|+-|.++++|..+|+..... ..|...+ +-+-+-|++-+||.++.+|.|+++.+|.++
T Consensus 640 ----~s~ilgs~E~~~G~Y~ftls~lkL~~~Lv~~als~~~~~~~~~~~~vL~~~~~~l~eVfes~~~Wrf~~~~qR~eI 715 (931)
T PF10487_consen 640 ----ASVILGSIEMVSGRYDFTLSLLKLFSALVDDALSSNSGVPSKTKSVVLPKIVFHLVEVFESFSTWRFNSPGQRFEI 715 (931)
T ss_pred ----HHHhhhhhhccCCcchHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHhhcCCceeCCChhhHHHH
Confidence 1233446788899999999999999999975422 1121112 333466888999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccCCchhhhhhhhcCCCcCCCCcccccCcHHHHHHHhccC----hHHHHHHHHhhccchhhHhhhh
Q 000295 550 VVACLKHFHMILNMYDIQEEDIDNAVEQSSTLTQSSPIQMQLPVLELLKDFMSG----KAVFRNIMGILQPGVDSIITER 625 (1711)
Q Consensus 550 ~~~cL~~f~~~L~~y~~~~edl~~~~~~~~~~~~~~~l~~y~P~~~vm~~~L~~----~~v~~~l~~ii~~Gvd~l~~e~ 625 (1711)
+..|+++|++.|...... + +.+.+......++. .++..|++.++.. ..+...|++++..|-..-....
T Consensus 716 g~~i~~~f~~IL~~~ygi-~------~~~~~~~klt~vl~-~aa~~il~~fl~~~s~~~~~~~pll~~l~~~~~~~~~~~ 787 (931)
T PF10487_consen 716 GRSILSIFSKILYYVYGI-D------EDSSPDSKLTSVLA-PAAQYILDSFLSPSSSSQRAMNPLLSILTSGLNTPLSSL 787 (931)
T ss_pred HHHHHHHHHHHHHHhcCC-C------CCCCcchhhHHhhh-HHHHHHHHHHccCCCchhhcchHHHHHHhcccccchhhh
Confidence 999999999998653211 1 01111100011100 1333555545532 2233444454433221110000
Q ss_pred ccCccChHHHHHHHHHHHHHHHHHhhhhhhhhhhcccccchhhhhccCc-hHHHHHHhhhccCCcchhHHHHHHHHHHHh
Q 000295 626 NNQIYGPLLEKAVQLSLEIVILVFEKDLLLSDFWRPLYQPVDVILSQDH-NQIVALLEYVRYDFLPQIQQCSIKIMSILS 704 (1711)
Q Consensus 626 ~~~~y~~~l~~~vl~aL~Il~~vL~~q~~f~d~lrpi~~~ld~lLs~~~-~~I~~L~~Yv~~~~~p~lal~SikIL~~ls 704 (1711)
.+.++..+.+.+..++++.+..+..... .+.+.| +.++..+..+. ..|.-+ ..++.+|..+...+++|..+.
T Consensus 788 -~~~~~~~~~~~v~~sl~~~~~Ll~~r~~-~~~l~P--S~LE~~Lf~~s~~Lv~~~---a~~~~~~~~~~~il~lL~sl~ 860 (931)
T PF10487_consen 788 -GDRSGQLLSRLVQSSLSFATLLLRIRSY-LNLLPP--SALEKQLFKASPDLVDLY---ASYPSLPRLRVPILELLTSLV 860 (931)
T ss_pred -hhhHHHHHHHHHHHHHHHHHHHHHHhhh-ccCCCc--hHHHHHHHhcchHHHHHH---hcccchhhHHHHHHHHHHHHh
Confidence 0112467889999999999999887543 344566 55777666444 344334 444444556666777776665
Q ss_pred h-hh----hhHHHHHhhhchhHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHhccCCCCChHHHhhhCCc
Q 000295 705 S-RM----VGLVQLLLKYNAASSLVEDYAACLELRSEESQIIEKSGDDPGVLIMQLLIDNISRPAPNITHLLLKFD 775 (1711)
Q Consensus 705 ~-r~----~~lv~~l~~~~es~~I~~~Fv~~Le~~~~d~~~~e~~~~~~k~~IL~lLl~nL~~~~PnlAHlLLGFd 775 (1711)
+ .+ |.+++-|.. ..|..+++.|+++|+.+++ +..+|..|.+|+-..+...+-.+|.+||--+
T Consensus 861 ~~~~~~e~PSLL~~LG~-~~s~~fl~~ll~~L~~p~~--------d~~l~~aIw~F~saiv~~~QqgLa~lfLTG~ 927 (931)
T PF10487_consen 861 SADWSSEPPSLLGHLGS-EHSKSFLDSLLSDLDNPFE--------DYNLKVAIWEFFSAIVEKQQQGLAILFLTGK 927 (931)
T ss_pred cCccCCCCCcHHHHcCC-hhHHHHHHHHHHHhCCccC--------CHHHHHHHHHHHHHHHccChhHHHHHHhcCC
Confidence 2 23 558887644 4467788889999987754 3468899999999999655449999988644
No 5
>KOG4833 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.98 E-value=1.7e-08 Score=115.64 Aligned_cols=271 Identities=18% Similarity=0.102 Sum_probs=173.2
Q ss_pred CCCCchhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHHHHHhccccccCCCCcchHHHHHHHH
Q 000295 11 GLGGPLCERYVLDSRGALVERRAVVYRERLILGHCLVLSVLVVRTSPKDVKDAFSALKDSAAELSENNDTLKHQITFSLL 90 (1711)
Q Consensus 11 ~lg~~~~~~~v~~~~~~~~~~~~~~~~~r~~L~~~l~~~~~~~~~~~~d~~~ll~~Lk~~~~~~~~~~d~v~l~~~~~ll 90 (1711)
-=||.+.|++|..|| +-.++++.+|.|.+|++|..+.|.+-|-.-+++.+|.+.. +...--++-+..+|.+.
T Consensus 117 eegnlikEeaVklif-------dgceReQSmlLEdiflscapfeMaildglvlfkkfaeqge-aqhqacRhlidelmild 188 (573)
T KOG4833|consen 117 EEGNLIKEEAVKLIF-------DGCEREQSMLLEDIFLSCAPFEMAILDGLVLFKKFAEQGE-AQHQACRHLIDELMILD 188 (573)
T ss_pred hhcchhhHHHHHHHH-------HHHHHHHHHHHHHHHHhhhhhhhccchhHHHHHHHHHhhh-hHHHHHHHHHHHHHHHH
Confidence 348899999999998 4449999999999999999999999999888998887752 11111244555555554
Q ss_pred HHHHH----hhhcccCCCCCccccccccchHHHHHHHHHHHcCCCCCCCcchhHHHHHHHHHHHHhhcchhhhhhhcCCC
Q 000295 91 FSLVI----AFISDALSTVPDKSSVLSRDASFRKEFHEIVMATGSDPIVEGFVGGVRLAWAVHLMLIHDEIAARETVSSS 166 (1711)
Q Consensus 91 ~a~~~----s~~~~~~~~~~~~~~~~~~d~~~~~~l~~~l~~~~~~W~~~~l~a~v~laW~~~l~~~~~~~~~~~~~~~~ 166 (1711)
.-+|. +-+++++|-. .+... .+-.+..++.|+.- +. .-.+....+...++|++........+-+.+...-.
T Consensus 189 eflDmeglfqalhdgegfd-iesch-fcalDdqeedaqfa--qd-glicqdeacllllagaifhcaislLagaeerhfLm 263 (573)
T KOG4833|consen 189 EFLDMEGLFQALHDGEGFD-IESCH-FCALDDQEEDAQFA--QD-GLICQDEACLLLLAGAIFHCAISLLAGAEERHFLM 263 (573)
T ss_pred HhhhHHHHHHHHhccCCcc-cccee-eeecccHHHHhHHh--cc-CceeeccccchhhhhHHHHHHHHhccchhhcCccC
Confidence 43332 2334444422 11222 22335555655543 22 24455566667777777766544433222110101
Q ss_pred CchhhHHHHHHHHHHHhcCcHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhh
Q 000295 167 SSSELSNIRSCLETIFSNNVFQFLLDKALRTAAYQNDDEDMVYMNNAYLHKLITCFLSHQLARDKVKESKDKAMSVLNSY 246 (1711)
Q Consensus 167 ~~~~~~~~~~~~~~Al~~~vF~Fl~~~ll~~~~~~~~~~~~~~f~~~~lh~li~~fI~~~~m~~kvk~lr~~~de~~~~~ 246 (1711)
..+-.....+.+++|+..++|+++...+++... ...+ .-.......|..||+ | +
T Consensus 264 dedhsSvVhkafeaAillnffeiLqrlLlndad-Ggid-----chrStacmcisafia--f------------------v 317 (573)
T KOG4833|consen 264 DEDHSSVVHKAFEAAILLNFFEILQRLLLNDAD-GGID-----CHRSTACMCISAFIA--F------------------V 317 (573)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCcc-----cchhHHHHHHHHHHH--H------------------H
Confidence 122235777889999999999999976665432 2222 233445556667776 2 1
Q ss_pred hhccCcccccCCCCCCCCCCCCCCCcHHHHHHHHHHHhccCcccccccccchh---HHH---------HhhccCCCcchH
Q 000295 247 RIAGSHDFVHDSNLPSQQDTEIGPLPFVSLLEFVSEIYQKEPELLSGNDVLWT---FVV---------FAGEDHTNFQTL 314 (1711)
Q Consensus 247 r~~~~~~~~~d~~~~~~~~~~~~~~dlE~fll~ia~~Y~~~P~~~~~~~~fWg---Fl~---------wa~~~~~~~~~~ 314 (1711)
-+.- . -+...++|..+-+.+++|++.-.++ ..||| |.. ..|+ . |.+.
T Consensus 318 einL----e-----------LetdGnledIiDiaceVladeeSLc---clFWdrepfsdgpigciLddlcge-F--Pfll 376 (573)
T KOG4833|consen 318 EINL----E-----------LETDGNLEDIIDIACEVLADEESLC---CLFWDREPFSDGPIGCILDDLCGE-F--PFLL 376 (573)
T ss_pred hhhe----e-----------eccCCcHHHHHHHHHHHHcCcchhh---HHHhCCCCCCCCceeEEehhhhcc-c--chhh
Confidence 1100 0 1234568888999999998666777 89994 221 2222 2 7789
Q ss_pred HHHHHHHHHhcCCchhHHHHHHHhcCC
Q 000295 315 VAFLKMLSTLASSQEGASKVYELLQGK 341 (1711)
Q Consensus 315 ~afl~ML~sLa~g~e~A~~~~~~L~~~ 341 (1711)
++|..+|+||++|...|.+||+||.+.
T Consensus 377 aefiqLLraLseGkspAecVYnFLDKm 403 (573)
T KOG4833|consen 377 AEFIQLLRALSEGKSPAECVYNFLDKM 403 (573)
T ss_pred HHHHHHHHHHhcCCChHHHHHHHHHHh
Confidence 999999999999999999999999864
No 6
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells. 26S proteasome non-ATPase regulatory subunit 5 is one of a number of chaperones that are involved in the assembly of the proteasome. The chaperones dissociate before 26S proteasome formation is complete [].; GO: 0044183 protein binding involved in protein folding
Probab=72.40 E-value=35 Score=44.39 Aligned_cols=184 Identities=15% Similarity=0.135 Sum_probs=108.0
Q ss_pred HHHHhhcccCCCcchHHHHHHHHHHHHcccC-cchHHHHHHhcCcHHHHHHHhhhhhhhccccCcchhhHHHHHHHHHHH
Q 000295 1241 LDLFIKDATQGSEPGKTLSLYVLDALICIDH-EKYFLNQLQSRGFLRSCLMNVSNVSYQDGKRSLDTLQRACTLEAELAL 1319 (1711)
Q Consensus 1241 idvIc~DA~~G~~~~r~~Al~lLd~Lv~ld~-~~~il~~L~~~g~L~~lv~sl~~~~L~~~~~~~~~l~~L~~yea~laL 1319 (1711)
+..+.+-.....++.|. -+++.++.+.. +....+....+|++..++..+++. |.+ +-.+.+-+
T Consensus 162 ~~~L~~l~~~~~~~vR~---Rv~el~v~i~~~S~~~~~~~~~sgll~~ll~eL~~d---------DiL----vqlnalel 225 (503)
T PF10508_consen 162 LSKLKSLMSQSSDIVRC---RVYELLVEIASHSPEAAEAVVNSGLLDLLLKELDSD---------DIL----VQLNALEL 225 (503)
T ss_pred HHHHHHHHhccCHHHHH---HHHHHHHHHHhcCHHHHHHHHhccHHHHHHHHhcCc---------cHH----HHHHHHHH
Confidence 33344433333445554 35556777765 467789999999999999999752 222 23466789
Q ss_pred HHHHhhhcCcchHHHHHhcchhHHhhhc-ccccccCcccc-------cc-cCCCc-cCCchhhhhhhhhHHHHHHHHH--
Q 000295 1320 LLRISHKYGKSGAQVLFSMGSLEHIASC-KAVGLQGSLRR-------VA-TKPRR-ALGGDIDRQRMIVTPMLRLVFS-- 1387 (1711)
Q Consensus 1320 LlriAq~~tr~GA~~Ll~~gl~~~L~~~-~~~~~~Pd~~~-------~~-~~~~~-~~p~~~~ry~~lL~PvlrL~~s-- 1387 (1711)
|..+|+ ++.|+++|.+.|+++.|.++ .--..||.... .| ..... .-+...++|-.++--+++...+
T Consensus 226 l~~La~--~~~g~~yL~~~gi~~~L~~~l~~~~~dp~~~~~~l~g~~~f~g~la~~~~~~v~~~~p~~~~~l~~~~~s~d 303 (503)
T PF10508_consen 226 LSELAE--TPHGLQYLEQQGIFDKLSNLLQDSEEDPRLSSLLLPGRMKFFGNLARVSPQEVLELYPAFLERLFSMLESQD 303 (503)
T ss_pred HHHHHc--ChhHHHHHHhCCHHHHHHHHHhccccCCcccchhhhhHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999 89999999999999999884 33356662211 01 11111 0124455665555555544321
Q ss_pred ---HHHhhccCCccchhHHHHHHHHHHH-HHHHHHHHHHHhhcccCCChh----hHHHHHHHHHHHH
Q 000295 1388 ---LTSLVDTSDFFEVKNKVVREVMDFI-KGHQLLVDQVLQENISEADEL----TMEQINLVVGILS 1446 (1711)
Q Consensus 1388 ---v~~~~~s~G~~~~n~~~~~qv~~FL-~~h~~li~~vLr~~~~~~~~~----~Leel~ll~~ll~ 1446 (1711)
...++++.|+..+ ..+.+.+| .++...+..+|++-......+ .+-=++.+.+|+.
T Consensus 304 ~~~~~~A~dtlg~igs----t~~G~~~L~~~~~~~~~~~l~~~~~~~~~~~~~lk~r~l~al~~il~ 366 (503)
T PF10508_consen 304 PTIREVAFDTLGQIGS----TVEGKQLLLQKQGPAMKHVLKAIGDAIKSGSTELKLRALHALASILT 366 (503)
T ss_pred hhHHHHHHHHHHHHhC----CHHHHHHHHhhcchHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHh
Confidence 1223333331112 24566666 777777777777766553332 3344555666653
No 7
>PLN03205 ATR interacting protein; Provisional
Probab=49.68 E-value=2.4e+02 Score=34.82 Aligned_cols=52 Identities=19% Similarity=0.198 Sum_probs=37.6
Q ss_pred cchHHHHHHHHHhcCCCC-----Cc-------hhHHHHHHHHHHHhhcCCCCcHHHHHHHhccc
Q 000295 791 YSCLKIILEILEKVSKPD-----VN-------ALLHEFGFQLLYELCLDPLTCGPTMDLLSNKK 842 (1711)
Q Consensus 791 ~ScLhsIL~lL~~~~~~~-----~~-------p~L~e~~~~lL~~Lc~~p~TS~~tL~~LR~~~ 842 (1711)
..-|--|+..|.+--+.+ .. ..|.+-++=+|-+|.+||-.|.+||+.|-.+.
T Consensus 534 ~NFLmLILqvLvSemd~e~s~~~~~~e~~KaRtLLmREaLILLNRLvSn~~ySa~vL~vLT~sR 597 (652)
T PLN03205 534 SNFLMLILHLLVAEIDSESTEFHPKAEIFKARTLLMREILILLNRLVSGLSSSATILKELTKSR 597 (652)
T ss_pred ccHHHHHHHHHHHHhhhhhhccCCcHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHhhh
Confidence 456666666665543211 11 24777788899999999999999999998775
No 8
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells. 26S proteasome non-ATPase regulatory subunit 5 is one of a number of chaperones that are involved in the assembly of the proteasome. The chaperones dissociate before 26S proteasome formation is complete [].; GO: 0044183 protein binding involved in protein folding
Probab=26.57 E-value=2.5e+02 Score=36.75 Aligned_cols=144 Identities=17% Similarity=0.256 Sum_probs=92.8
Q ss_pred HHHHHHHHHhccCcccccccccch--hHHHHhhcc--CCCcchHHHHHHHHHHhcCCchhHHHHHHHhcCCCCCcccHHH
Q 000295 275 SLLEFVSEIYQKEPELLSGNDVLW--TFVVFAGED--HTNFQTLVAFLKMLSTLASSQEGASKVYELLQGKAFRSIGWRT 350 (1711)
Q Consensus 275 ~fll~ia~~Y~~~P~~~~~~~~fW--gFl~wa~~~--~~~~~~~~afl~ML~sLa~g~e~A~~~~~~L~~~~~~~vSW~~ 350 (1711)
|.+.++..+...-|+.. ...| |++.-.-+. ..|+......+++|..||.++.++ +||...+
T Consensus 179 Rv~el~v~i~~~S~~~~---~~~~~sgll~~ll~eL~~dDiLvqlnalell~~La~~~~g~----~yL~~~g-------- 243 (503)
T PF10508_consen 179 RVYELLVEIASHSPEAA---EAVVNSGLLDLLLKELDSDDILVQLNALELLSELAETPHGL----QYLEQQG-------- 243 (503)
T ss_pred HHHHHHHHHHhcCHHHH---HHHHhccHHHHHHHHhcCccHHHHHHHHHHHHHHHcChhHH----HHHHhCC--------
Confidence 56677888888788777 4444 565554432 144667889999999999988774 5555432
Q ss_pred HHHHHHHHHHHhhhccccCCCCCCCCChhhHHHHHHHHHHHHHHHhcCccccccccCC-ChHHHHHhccCCCCChhHHHH
Q 000295 351 LFDCLSIYDEKFKQSLQTGGALLPDFQEGDAKALVAYLNVLQKVMENGNSIERKNWFP-DIEPLFKLLSYENVPPYLKGA 429 (1711)
Q Consensus 351 iF~~L~~Y~~~l~~~~~~~~~~~~~~~~ee~~~L~a~L~Li~~V~~~~~~~e~~~w~~-~i~~Lf~Ll~~~~VP~~LKa~ 429 (1711)
+|+.|.....+-..++ --...++.++++..+.++..++. +..+-+| +++.+|.++. +-....+..
T Consensus 244 i~~~L~~~l~~~~~dp-----------~~~~~~l~g~~~f~g~la~~~~~-~v~~~~p~~~~~l~~~~~--s~d~~~~~~ 309 (503)
T PF10508_consen 244 IFDKLSNLLQDSEEDP-----------RLSSLLLPGRMKFFGNLARVSPQ-EVLELYPAFLERLFSMLE--SQDPTIREV 309 (503)
T ss_pred HHHHHHHHHhccccCC-----------cccchhhhhHHHHHHHHHhcChH-HHHHHHHHHHHHHHHHhC--CCChhHHHH
Confidence 6666655443332221 02345667778888888886442 2222233 3567777765 477888999
Q ss_pred HHHHHHHhhhcChhhHHHH
Q 000295 430 LRNAIAACIHVSLVMKDNI 448 (1711)
Q Consensus 430 i~~tLaal~~~s~~~a~~i 448 (1711)
.++||+.++. +.+-+..+
T Consensus 310 A~dtlg~igs-t~~G~~~L 327 (503)
T PF10508_consen 310 AFDTLGQIGS-TVEGKQLL 327 (503)
T ss_pred HHHHHHHHhC-CHHHHHHH
Confidence 9999999998 55554444
No 9
>KOG0889 consensus Histone acetyltransferase SAGA, TRRAP/TRA1 component, PI-3 kinase superfamily [Signal transduction mechanisms; Chromatin structure and dynamics; Replication, recombination and repair; Cell cycle control, cell division, chromosome partitioning]
Probab=19.99 E-value=2.6e+02 Score=43.72 Aligned_cols=139 Identities=17% Similarity=0.208 Sum_probs=81.5
Q ss_pred HHHHhhhhCCCCccccCCc-hhHHHHHHHHHHHHHHHHhcccCCc-hhh-hhhhhcCCCcCCCCcccccCcHHHHHHHhc
Q 000295 525 RFVYDHVFGPFPQRAYADP-CEKWQLVVACLKHFHMILNMYDIQE-EDI-DNAVEQSSTLTQSSPIQMQLPVLELLKDFM 601 (1711)
Q Consensus 525 ~FV~~~VF~~~~~r~Y~~~-~ekw~l~~~cL~~f~~~L~~y~~~~-edl-~~~~~~~~~~~~~~~l~~y~P~~~vm~~~L 601 (1711)
.+++..+|.....-+|.+- .|...+--.+|+++|+++..|.-.- -|+ .+.-.+.++.. +.+.+|.| +|
T Consensus 652 f~LLraLFRsigGg~~d~ly~e~lplL~~lLe~ln~l~~~~~s~~mkdLfvELclTvPvRL--S~Llpylp-------~L 722 (3550)
T KOG0889|consen 652 FQLLRALFRSIGGGAFDSLYREVLPLLPNLLEILNHLLSSFHSQGMKDLFVELCLTLPVRL--SSLLPYLP-------LL 722 (3550)
T ss_pred HHHHHHHHHHhhccchHhHHHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHhhhHHH--HHhhhhhh-------hh
Confidence 4556677877776665543 6666788899999999998887643 343 33333322211 44556655 22
Q ss_pred cChHHHHHHHHhhccchhhHhhhhccCccChHHHHHHHHHHHHHHHHHh-hhhhhhhhhcccccchhhhhccCchHHHHH
Q 000295 602 SGKAVFRNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFE-KDLLLSDFWRPLYQPVDVILSQDHNQIVAL 680 (1711)
Q Consensus 602 ~~~~v~~~l~~ii~~Gvd~l~~e~~~~~y~~~l~~~vl~aL~Il~~vL~-~q~~f~d~lrpi~~~ld~lLs~~~~~I~~L 680 (1711)
.++-+.. + + |+ -+++.++|+.++..++ +++.|++ |++.|. .-.+..
T Consensus 723 M~PLv~a------------L-k-------gs--~~lvsQgLRtlelcvDnltPefL~---~~mepv--------~~~lmq 769 (3550)
T KOG0889|consen 723 MKPLVFA------------L-K-------GS--PELVSQGLRTLELCVDNLTPEFLD---PIMEPV--------RDDLMQ 769 (3550)
T ss_pred hhHHHHH------------h-c-------CC--HHHHHHHHhHHHHHHhcCChHhhh---HHHHHH--------HHHHHH
Confidence 2222111 1 2 22 2688899999999988 5777755 333221 112223
Q ss_pred HhhhccCC--cchhHHHHHHHHHHHhh
Q 000295 681 LEYVRYDF--LPQIQQCSIKIMSILSS 705 (1711)
Q Consensus 681 ~~Yv~~~~--~p~lal~SikIL~~ls~ 705 (1711)
+++.+... +..++..|+|||+++-+
T Consensus 770 aLw~~l~~~~~~s~s~~a~rILGKlgG 796 (3550)
T KOG0889|consen 770 ALWSHLRPVPNYSYSHRALRILGKLGG 796 (3550)
T ss_pred HHHHhccCCCCchHHHHHHHHHHhhcC
Confidence 44444422 35688889999999963
No 10
>KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport]
Probab=18.27 E-value=1.3e+03 Score=31.45 Aligned_cols=78 Identities=24% Similarity=0.282 Sum_probs=49.7
Q ss_pred ChHHHHHHHHHhccC--------CCCChHHHhhhCCccCCCCccccccCCCCcchHHHHHHHHHhcCCCCCchhHHHHH-
Q 000295 747 DPGVLIMQLLIDNIS--------RPAPNITHLLLKFDLDTPIERTVLQPKFHYSCLKIILEILEKVSKPDVNALLHEFG- 817 (1711)
Q Consensus 747 ~~k~~IL~lLl~nL~--------~~~PnlAHlLLGFdv~~~~~~~~l~p~~~~ScLhsIL~lL~~~~~~~~~p~L~e~~- 817 (1711)
++=..+..+|-.|.+ .--|-++|+|=-|...++ +..... ....+|+|-.|.++.....|...+..+..|
T Consensus 231 DCL~ll~NLLK~N~SNQ~~FrE~~~i~rL~klL~~f~~~d~-Ev~~W~-~Qrv~Nv~~~Lqivr~lVsP~Nt~~~~~q~q 308 (970)
T KOG0946|consen 231 DCLILLNNLLKNNISNQNFFREGSYIPRLLKLLSVFEFGDG-EVFGWS-TQRVQNVIEALQIVRSLVSPGNTSSITHQNQ 308 (970)
T ss_pred HHHHHHHHHHhhCcchhhHHhccccHHHHHhhcCcccccCc-cccccc-HHHHHHHHHHHHHHHHhcCCCCcHHHHHHHH
Confidence 345667777777763 446888998888887663 222222 246789999999999887655443333333
Q ss_pred -----HHHHHHhhc
Q 000295 818 -----FQLLYELCL 826 (1711)
Q Consensus 818 -----~~lL~~Lc~ 826 (1711)
-++|..||.
T Consensus 309 k~l~ss~ll~~Lc~ 322 (970)
T KOG0946|consen 309 KALVSSHLLDVLCT 322 (970)
T ss_pred HHHHHcchHHHHHH
Confidence 235555554
Done!