Your job contains 1 sequence.
>000305
MPEDESTRISVSRGDGKYGRNSRENRSSFCQSDCKGYAWDTSNGYATTPGRLHEVNCNQR
SVDDMLTYPSHPQSDFVTWDHLQLKDQHDNKIGSVNGLATGQRCESENSLDWKKIKWTRS
GSLSSRGSGLSHSSSSKSMGGVDSSEGKTDFQVKNATSIQSPSGDAATYATSGVLFEETT
SRKKPRLGWGEGLAKYEKKKVEVPDVSGNKDGVFNFSSNAEPLQSLSSNLAEKSPRVMGF
SDCASPATPSSVACSSSPGVEEKAFGKAVSVDNDVSNLCGSPSIVSQNHREGFLFNLEKL
DTNSIGNLGSSLVELLQYDDPSSVDSSFVRSTAMNKLLVWKGDILKTLEMTETEIDSLEN
ELKSLKSVLGSTSPCPVTSISLSVEDNANPFNKQGTVSNSIIRPAPLQIDCGDLSVENMP
DCSHGLEEVHGNSKDEDIDSPGTATSKFVEPSSFVKPVSPSNMLKNGESFGVLDTVHSSN
TEVKCTMPGSSFGEVVAGASTCGDGDMILESKNDALISSNFSAYADGENMLCDMILGANK
ELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLRFKERVLTLKF
KAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKHRSSIRSRFSSPAGNLSLVQ
TAEVINFTSKLLSDSQIKTYRNSLKMPALILDKKEKMSSRFISSNGLVEDPCAVEKERAM
INPWTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDCFEKLKKKHDF
SKQGKTSTNTYLVTTGKRNRKMNAASLDILGEASEIAAAAQVDGRQLISSGRISSGGRGD
SRTSLGDDGIIERSSSFDVIGGERETAAADVLAGICGSLSSEAMSSCITSSVDPAEGQRD
WRRQKADSVMRLPSTSDVTQNVDDDTCSDESCGEMDPSDWTDEEKSIFIQAVTSYGKDFS
MIARCIRTRSRDQCKVFFSKARKCLGLDLIHTGRGNVGPSVNDDANGGGSDTEDACVLET
SSVNCSDKLGSKTDEELPSHVIHSNQEESCSAGAKNLQTDLNKPEDDNGITPLNDKDSEA
VKPVNNDAFRTESRSFELESNNMNGMDNQSESVLDQKNAVELFKTAVRDKVAEQGAVSVS
AGEESDPCPSSSNAVEETNDVVAEASTEGFGNGLERYQPMLLENSLNDVRDKICNVDACG
ESEIVQDSNTTGSAFDLYVDASSHSVSSKLDSVDKPPLISLPQWNSHPAAASTQDSSVIQ
CEKAFIQDRMSSTLEFQRSKDKSGHKSVVSDDYRQHLSVHSIVNHVESPQILNGYPLPIS
TKKEMNGDINCRQLSEVQSISKSDRNIDEPYLAQDCYLRKCNSSMPHSSVTELPFLAENI
EQTSDRRRAHSCSFSDTEKPSKNGDVKLFGKILSHPSSSQKSAFSSHDNGENGHHHKQSS
KASNLKFTAHHPPDGGAALLKFDRNNYVGLENGPARSYGFWDGSKIQTGFSSLPDSAILL
AKYPAAFGGYPASSSKMEQQSLQAAVVKSNERHLNGVAVVPPREISSSNGVVDYQVYRSR
EGNKVQPFSVDMKQRQEFLFAEMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR
NGFEALSSIQQQGKGMVGVNVVGRGGILVGGGSCTGVSDPVAAIRMHYAKAEQYGGQGGS
IIREEESWRGKGDIGR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000305
(1696 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2100529 - symbol:AT3G52250 species:3702 "Arabi... 1145 3.4e-205 6
ZFIN|ZDB-GENE-030616-81 - symbol:ncor2 "nuclear receptor ... 224 2.8e-19 3
UNIPROTKB|E9PGV6 - symbol:NCOR1 "Nuclear receptor corepre... 207 7.8e-19 2
UNIPROTKB|O75376 - symbol:NCOR1 "Nuclear receptor corepre... 207 2.6e-18 2
UNIPROTKB|E2RKW5 - symbol:NCOR1 "Uncharacterized protein"... 207 3.7e-17 2
MGI|MGI:1349717 - symbol:Ncor1 "nuclear receptor co-repre... 207 1.0e-16 3
UNIPROTKB|F1SDC8 - symbol:NCOR1 "Uncharacterized protein"... 207 8.0e-16 2
UNIPROTKB|F1MGM4 - symbol:NCOR1 "Uncharacterized protein"... 206 1.1e-15 3
UNIPROTKB|J9P1J2 - symbol:NCOR1 "Uncharacterized protein"... 207 1.2e-15 3
UNIPROTKB|E1BSW5 - symbol:NCOR1 "Uncharacterized protein"... 203 1.5e-15 3
ZFIN|ZDB-GENE-040426-993 - symbol:ncor1 "nuclear receptor... 199 1.6e-15 5
UNIPROTKB|J9NUC7 - symbol:NCOR2 "Uncharacterized protein"... 203 2.8e-15 3
UNIPROTKB|F1RFN4 - symbol:F1RFN4 "Uncharacterized protein... 218 3.6e-14 3
UNIPROTKB|C9JQE8 - symbol:NCOR2 "Nuclear receptor corepre... 200 8.5e-14 3
RGD|1310293 - symbol:Ncor2 "nuclear receptor co-repressor... 200 1.0e-13 3
UNIPROTKB|C9J239 - symbol:NCOR2 "Nuclear receptor corepre... 200 4.0e-13 3
UNIPROTKB|F1PQQ7 - symbol:NCOR2 "Uncharacterized protein"... 203 4.3e-13 4
DICTYBASE|DDB_G0270560 - symbol:mybP "myb domain-containi... 175 8.4e-13 5
UNIPROTKB|E7EW50 - symbol:NCOR1 "Nuclear receptor corepre... 207 8.8e-13 1
UNIPROTKB|E7EVU5 - symbol:NCOR1 "Nuclear receptor corepre... 206 1.1e-12 1
UNIPROTKB|C9JFD3 - symbol:NCOR2 "Nuclear receptor corepre... 200 1.1e-12 3
UNIPROTKB|Q9Y618 - symbol:NCOR2 "Nuclear receptor corepre... 200 1.1e-12 3
UNIPROTKB|J3KS51 - symbol:NCOR1 "Nuclear receptor corepre... 206 1.1e-12 1
MGI|MGI:1337080 - symbol:Ncor2 "nuclear receptor co-repre... 200 1.3e-12 4
UNIPROTKB|F1LS82 - symbol:Ncor1 "Nuclear receptor corepre... 213 1.5e-12 3
UNIPROTKB|C9JE98 - symbol:NCOR2 "Nuclear receptor corepre... 193 2.1e-12 3
UNIPROTKB|C9J0Q5 - symbol:NCOR2 "Nuclear receptor corepre... 193 2.3e-12 3
UNIPROTKB|C9J330 - symbol:NCOR2 "Nuclear receptor corepre... 200 4.1e-12 1
UNIPROTKB|F1LS83 - symbol:Ncor1 "Nuclear receptor corepre... 213 1.8e-11 2
UNIPROTKB|F1LSA0 - symbol:Ncor1 "Nuclear receptor corepre... 207 7.9e-11 2
UNIPROTKB|G3X7K5 - symbol:NCOR2 "Uncharacterized protein"... 196 1.8e-09 4
CGD|CAL0003874 - symbol:PGA55 species:5476 "Candida albic... 164 8.3e-07 1
UNIPROTKB|Q59SG9 - symbol:PGA55 "Flocculin-like protein" ... 164 8.3e-07 1
ZFIN|ZDB-GENE-050208-371 - symbol:rcor3 "REST corepressor... 126 2.3e-06 2
UNIPROTKB|F1NHX5 - symbol:RCOR3 "REST corepressor 3" spec... 115 4.6e-06 2
FB|FBgn0261573 - symbol:CoRest "CoRest" species:7227 "Dro... 114 1.3e-05 2
UNIPROTKB|Q9UKL0 - symbol:RCOR1 "REST corepressor 1" spec... 94 2.7e-05 3
UNIPROTKB|F1MYQ0 - symbol:RCOR3 "Uncharacterized protein"... 108 2.7e-05 2
UNIPROTKB|Q9P2K3 - symbol:RCOR3 "REST corepressor 3" spec... 108 2.7e-05 2
UNIPROTKB|J3KN32 - symbol:RCOR1 "REST corepressor 1" spec... 94 2.7e-05 3
UNIPROTKB|C9J7T7 - symbol:NCOR2 "Nuclear receptor corepre... 121 2.9e-05 3
UNIPROTKB|E2RRB8 - symbol:RCOR3 "Uncharacterized protein"... 108 3.6e-05 2
MGI|MGI:106340 - symbol:Rcor1 "REST corepressor 1" specie... 95 6.3e-05 3
ZFIN|ZDB-GENE-040426-1812 - symbol:rcor2 "REST corepresso... 115 6.3e-05 2
UNIPROTKB|F1RFN3 - symbol:LOC733643 "Uncharacterized prot... 121 9.6e-05 5
SGD|S000001800 - symbol:SRP40 "Nucleolar serine-rich prot... 130 0.00012 1
UNIPROTKB|Q8N108 - symbol:MIER1 "Mesoderm induction early... 125 0.00013 2
UNIPROTKB|Q5REE1 - symbol:MIER1 "Mesoderm induction early... 125 0.00013 2
UNIPROTKB|Q9NZW4 - symbol:DSPP "Dentin sialophosphoprotei... 135 0.00017 1
UNIPROTKB|Q08DY2 - symbol:MIER1 "Mesoderm induction early... 124 0.00021 2
RGD|2323581 - symbol:LOC100363014 "REST corepressor 1-lik... 95 0.00028 2
UNIPROTKB|F1PEI0 - symbol:RCOR1 "Uncharacterized protein"... 94 0.00036 2
POMBASE|SPAC22E12.19 - symbol:snt1 "Set3 complex subunit ... 145 0.00038 3
ZFIN|ZDB-GENE-050506-79 - symbol:rcor1 "REST corepressor ... 98 0.00040 2
UNIPROTKB|F1PLG6 - symbol:MIER1 "Uncharacterized protein"... 122 0.00045 2
UNIPROTKB|F1SK28 - symbol:BDP1 "Uncharacterized protein" ... 132 0.00048 5
RGD|1562337 - symbol:Mier1 "mesoderm induction early resp... 120 0.00056 2
UNIPROTKB|E1BWG6 - symbol:RCOR1 "Uncharacterized protein"... 91 0.00084 2
MGI|MGI:1918398 - symbol:Mier1 "mesoderm induction early ... 118 0.00090 2
>TAIR|locus:2100529 [details] [associations]
symbol:AT3G52250 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008380 "RNA
splicing" evidence=ISS] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0005634 EMBL:CP002686
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 IPI:IPI00524249
RefSeq:NP_190793.2 UniGene:At.35314 PRIDE:F4J6V1
EnsemblPlants:AT3G52250.1 GeneID:824390 KEGG:ath:AT3G52250
OMA:SYGFWDG Uniprot:F4J6V1
Length = 1656
Score = 1145 (408.1 bits), Expect = 3.4e-205, Sum P(6) = 3.4e-205
Identities = 285/680 (41%), Positives = 399/680 (58%)
Query: 517 ISSNFSAYADGENMLCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDS 576
+SS + A E++ +L ANK+ A E+S V +LLPRD ++ D S + Q DS
Sbjct: 660 VSSADDSMASKEDLFWAKLLSANKKYACESSGVFNQLLPRDFNSSDNSRFPGICQTQFDS 719
Query: 577 LVKEKFAKKKQLLRFKERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYT 636
V+EK A + LLR +E++L L+FKAFQ W++DL L++ KY+++S KK EL
Sbjct: 720 HVQEKIADRVGLLRAREKILLLQFKAFQLSWKKDLDQLALAKYQSKSSKKTELYPNAKNG 779
Query: 637 GYQKHRSSIRSRFSSPAGNL-SLVQTAEVINFTSKLLSDSQIKTYRNSLKMPALILDKKE 695
GY K S+R RFSS A S+V T E++++ KLL + +K +R+ LKMPA+ILD+KE
Sbjct: 780 GYLKLPQSVRLRFSSSAPRRDSVVPTTELVSYMEKLLPGTHLKPFRDILKMPAMILDEKE 839
Query: 696 KMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYKTT 755
++ SRFISSNGL+EDPC VEKER MINPWTSEE+EIF++ LA GKDF+KIAS L KTT
Sbjct: 840 RVMSRFISSNGLIEDPCDVEKERTMINPWTSEEKEIFLNLLAMHGKDFKKIASSLTQKTT 899
Query: 756 ADCVEFYYKNHKSDCFEKLKKKHDFSKQGKTSTNTYLVTTGKR-NRKMNAASLDILGEAS 814
ADC+++YYKNHKSDCF K+KK+ + K+GK +TY++ K+ R+M AASLDILG+ S
Sbjct: 900 ADCIDYYYKNHKSDCFGKIKKQRAYGKEGK---HTYMLAPRKKWKREMGAASLDILGDVS 956
Query: 815 EIAA-AAQVDGRQXXXXXXXXXXXXXXXXXXXXXXXIIERSS-SFDVIGGERETAAADVL 872
IAA A +V + E S SFD + TA ADVL
Sbjct: 957 IIAANAGKVASTRPISSKKITLRGCSSANSLQHDGNNSEGCSYSFDF--PRKRTAGADVL 1014
Query: 873 AGICGSLSSEAMSSCITSSVDPAEGQRDWRRQKADSVMRLPSTSDV------------TQ 920
A G LS E ++SC+ +SV E D K + V++ P S
Sbjct: 1015 A--VGPLSPEQINSCLRTSVSSRERCMD--HLKFNHVVKKPRISHTLHNENSNTLHNENS 1070
Query: 921 NVDDDTCSDESCGEMDPSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSK 980
N +DD+CS+ESCGE P WTD+E+S FIQ + +GK+F+ I+R + TRS DQCKVFFSK
Sbjct: 1071 NEEDDSCSEESCGETGPIHWTDDERSAFIQGFSLFGKNFASISRYVGTRSPDQCKVFFSK 1130
Query: 981 ARKCLGLDLIHTGRGNVGPSVN-DDAN-GGGSDTEDACVLETSSVNCSDKLGSKTDEELP 1038
RKCLGL+ I G GNV SV+ D+ N GGGSD ED C +E++S ++ + +K P
Sbjct: 1131 VRKCLGLESIKFGSGNVSTSVSVDNGNEGGGSDLEDPCPMESNSGIVNNGVCAKMGMNSP 1190
Query: 1039 SHVIHSNQEESCSAGAKNLQTDLNKPEDDNGITPLNDKDSEAVKPVNNDAFRTESRSFEL 1098
+ + NQ+ +G+ N++ DL++ E++NG L KD + VNN S
Sbjct: 1191 TSPFNMNQDGVNQSGSANVKADLSRSEEENGQKYLCLKDDNNL--VNNAYVNGGFPSLVS 1248
Query: 1099 ESN----NMNGMDNQSESVLDQKNAVELFKTAVRDKVAEQGAVSVSAGEESDPCPSS--S 1152
ES ++N +++QS++ K+ +L + + V SV+ E C S S
Sbjct: 1249 ESCRDLVDINTVESQSQAAGKSKSN-DLMSMEIDEGVL----TSVTISSEPLYCGLSVLS 1303
Query: 1153 NAVEETNDVVAEASTEGFGN 1172
N + ET E S +G G+
Sbjct: 1304 NVIVETP---TEISRKGSGD 1320
Score = 583 (210.3 bits), Expect = 3.4e-205, Sum P(6) = 3.4e-205
Identities = 144/340 (42%), Positives = 186/340 (54%)
Query: 63 DDMLTYPSHPQSDFV-TWDHLQLKDQHDNK-IGSVNGLATGQRCESENSLD--WKKIKWT 118
D+ L P P ++ TW+ L+LKD DN + +N + ++C E+SL K W
Sbjct: 243 DNSLDAPI-PNAELEGTWEQLRLKDPQDNNSLHGINDIDGDRKCAKESSLGATGKLPLWN 301
Query: 119 RXXXXXXXXXXXXXXXXXXXXXXXXXXEGKTDFQVKNATSIQSPSGDAATYATSGVLFEE 178
+ K + K T QS SGDA AT+ L EE
Sbjct: 302 SSGSFASQSSGFSHSSSLKSLGAVDSSDRKIEVLPKIVTVTQSSSGDATACATTTHLSEE 361
Query: 179 TTSRKKPRLGWGEGLAKYEKKKVEVPDVSGNKDGVFNFSSNAEPLQSLSSNLAEKSPRVM 238
+SRKK RLGWGEGLAKYEKKKV DV+ N+DG + E L SL+ N+A+KSP
Sbjct: 362 MSSRKKQRLGWGEGLAKYEKKKV---DVNPNEDGTTLMENGLEELHSLNKNIADKSPTAA 418
Query: 239 GFSDCASPATPSSVACSSSPGVEEKAFGKAVSVDNDVSNLCGSPSIVSQNHREGFLFNLE 298
D SP TPSSVACSSSPG +K+ KA +DVSN+C SPS VS H E F N+E
Sbjct: 419 IVPDYGSPTTPSSVACSSSPGFADKSSPKAAIAASDVSNMCRSPSPVSSIHLERFPINIE 478
Query: 299 KLDTNSIGNLGSSLVELLQYDDPSSVDSSFVRSTAMNKLLVWKGDILKTLEMTETEIDSL 358
+LD S+ G L ELL DD + DSS V+ T+MN LL WKG+ILK +EMTE+EID L
Sbjct: 479 ELDNISMERFGCLLNELLGTDDSGTGDSSSVQLTSMNTLLAWKGEILKAVEMTESEIDLL 538
Query: 359 ENELKSLKSVLGSTSPCPVTSISLSVEDNANPFNKQGTVS 398
EN+ ++LK + G V S + +AN +Q + S
Sbjct: 539 ENKHRTLK-LEGRRHSRVVGPSSYCCDGDANVPKEQASCS 577
Score = 140 (54.3 bits), Expect = 3.4e-205, Sum P(6) = 3.4e-205
Identities = 36/99 (36%), Positives = 51/99 (51%)
Query: 1464 RNNYVG---LENGPARSYGFWDGSKIQTGFSSLPDSAILLAKYPAAFGGY---PASSSKM 1517
R++Y+ L+N P SYGFWDG++IQTG +SLP+SA LLA P AF + +SK
Sbjct: 1555 RHHYINQQHLQNVPITSYGFWDGNRIQTGLTSLPESAKLLASCPEAFSTHLKQQVGNSKE 1614
Query: 1518 EQQSLQAAVV---KSNERHLNGVAVVPPREISSSNGVVD 1553
+ ++ K NE + I NGV +
Sbjct: 1615 ILVDVNGGILSFGKHNEDRAESSSAKDEGNIGGVNGVAE 1653
Score = 137 (53.3 bits), Expect = 3.4e-205, Sum P(6) = 3.4e-205
Identities = 51/165 (30%), Positives = 73/165 (44%)
Query: 1302 IVNHVESPQILNGYPLPISTKKEMNGDINCRQ-LSEVQSISKSDRNIDEPYLAQDCYLRK 1360
++ HV QI G +T+ N + Q LS + S SKSD + + L K
Sbjct: 1422 VLGHVNPEQI--GLLKATNTESCQNPQRSVTQDLSRI-SRSKSDLIVKTQRTGEGFSLTK 1478
Query: 1361 CNSSMPHSSVTELPFLAENIEQTSDRRRAHSCSFSDTEKPSKNGDVKLFGKILS------ 1414
C SS P P + E S R+HS S SDTE+ KNGDVKLFG +L+
Sbjct: 1479 CTSSAPK------PLAVSHKEGRSGHSRSHSFSLSDTERLHKNGDVKLFGTVLTTDENGI 1532
Query: 1415 ---H-PSSSQKSAFSSHDNGENGHHHKQSSKASNLKFTAHHPPDG 1455
H P +S+ + + + HH+ N+ T++ DG
Sbjct: 1533 KQKHNPCGIVRSSSTLSRDHDTRHHYINQQHLQNVPITSYGFWDG 1577
Score = 110 (43.8 bits), Expect = 3.4e-205, Sum P(6) = 3.4e-205
Identities = 30/91 (32%), Positives = 46/91 (50%)
Query: 5 ESTRISVSRGDGKYGRNSRENRSSFCQSDCKGYAWDTSNGYATTPGRLHEVNCNQRSVDD 64
++ R S SRGD +Y RN R++R S Q + K W+ SNG + + R + +RSVD+
Sbjct: 89 DNYRPSASRGDWRYTRNCRDDRVSVSQKEWKCNTWEMSNGSSRSFERPFGIRNGRRSVDE 148
Query: 65 MLTYPSHPQSDFV-TWDHLQLKDQHDNKIGS 94
+ S S V + D DN+I +
Sbjct: 149 RPLHASDTHSTVVNSLDPANSAHYLDNEIST 179
Score = 75 (31.5 bits), Expect = 4.0e-146, Sum P(6) = 4.0e-146
Identities = 21/70 (30%), Positives = 37/70 (52%)
Query: 47 TTPGRLHEVNCNQRSVDDMLTYPSHPQSDFVT-WDHLQLKDQHDNKIGS----VNGLATG 101
+TP R ++ + D L+ PS P S+ ++ ++ ++ + NK+ S N L G
Sbjct: 178 STPVRSLKIKNEHKFSDQRLSLPSDPHSECISLFERPSSENNYGNKVCSPAKQCNDLMYG 237
Query: 102 QRCESENSLD 111
+R S+NSLD
Sbjct: 238 RRLVSDNSLD 247
Score = 60 (26.2 bits), Expect = 2.4e-20, Sum P(5) = 2.4e-20
Identities = 30/139 (21%), Positives = 61/139 (43%)
Query: 1058 QTDLNKPEDDNGITPLNDKDSE--AVKPVNNDA-----FRTESRSFELESNNMNGMDN-Q 1109
Q L P+D+N + +ND D + K + A S SF +S+ + + +
Sbjct: 261 QLRLKDPQDNNSLHGINDIDGDRKCAKESSLGATGKLPLWNSSGSFASQSSGFSHSSSLK 320
Query: 1110 SESVLDQKNAVELFKTAVRDKVAEQGAVSVSAGEESDPCPSSSNAVEETNDVVAEASTEG 1169
S +D + K V K+ V+ S+ ++ C ++++ EE + + G
Sbjct: 321 SLGAVDSSDR----KIEVLPKIV---TVTQSSSGDATACATTTHLSEEMSS--RKKQRLG 371
Query: 1170 FGNGLERYQPMLLENSLND 1188
+G GL +Y+ ++ + N+
Sbjct: 372 WGEGLAKYEKKKVDVNPNE 390
Score = 54 (24.1 bits), Expect = 8.9e-150, Sum P(6) = 8.9e-150
Identities = 31/129 (24%), Positives = 56/129 (43%)
Query: 381 SLSVEDNANPFNKQGTVSNSIIRPAPLQID-CGDLSVENMPDCSHGLEEVHGNSKDEDID 439
+++ D +N VS+ + P+ I+ ++S+E C L E+ G D
Sbjct: 449 AIAASDVSNMCRSPSPVSSIHLERFPINIEELDNISMERF-GCL--LNELLGT------D 499
Query: 440 SPGTATSKFVEPSSFVKPVS-PSNMLKNGE-SFGVLDTVHSSNTEVKCTMPGSSFGEVVA 497
GT S V+ +S ++ +LK E + +D + + + +K + G VV
Sbjct: 500 DSGTGDSSSVQLTSMNTLLAWKGEILKAVEMTESEIDLLENKHRTLK--LEGRRHSRVVG 557
Query: 498 GASTCGDGD 506
+S C DGD
Sbjct: 558 PSSYCCDGD 566
Score = 52 (23.4 bits), Expect = 1.4e-149, Sum P(6) = 1.4e-149
Identities = 25/119 (21%), Positives = 53/119 (44%)
Query: 345 LKTLEMTETEIDSLENELKSLKSVLGSTSPCPVTSISLSVEDNANPFNKQGTVSNSIIRP 404
L ++ ++ +I+ L + +S G + C T+ LS E ++ + G + +
Sbjct: 322 LGAVDSSDRKIEVLPKIVTVTQSSSGDATACATTT-HLSEEMSSRKKQRLGW-GEGLAKY 379
Query: 405 APLQIDCGDLSVENMPDCSHGLEEVHGNSKDEDIDSPGTATSKFVEPSSFVKPVSPSNM 463
++D + + +GLEE+H +K+ SP A + P + P +PS++
Sbjct: 380 EKKKVDVNP-NEDGTTLMENGLEELHSLNKNIADKSPTAA----IVPD-YGSPTTPSSV 432
Score = 51 (23.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 29/126 (23%), Positives = 49/126 (38%)
Query: 1358 LRKCNSSMPHSSVTELPFLAENIEQTSDRRRAHSCSFS--DTEKPS---KNGDVKLFGKI 1412
LR+ P S PF + + R S D +PS K G F +
Sbjct: 14 LRQRKHDRPEQSFESPPFRWRDSPSSHHVPREFSSRLGSGDFRRPSCHGKQGGRHQFVEE 73
Query: 1413 LSHPSSSQKSAFSSHDNGENGHHHKQSSKASNLKFTAHHPPDGGAALLKFDRNNYVGLEN 1472
SH +S +S+ DN ++ S+ + ++T + D + K + N + N
Sbjct: 74 TSHGYTSSRSSARMFDN------YRPSASRGDWRYTRNCRDDRVSVSQKEWKCNTWEMSN 127
Query: 1473 GPARSY 1478
G +RS+
Sbjct: 128 GSSRSF 133
Score = 48 (22.0 bits), Expect = 2.6e-76, Sum P(5) = 2.6e-76
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 1182 LENSLNDVRDKICNVDACGESEIVQDSNTTGSAF 1215
L N ++ D C+ ++CGE+ + ++ SAF
Sbjct: 1065 LHNENSNEEDDSCSEESCGETGPIHWTDDERSAF 1098
Score = 47 (21.6 bits), Expect = 4.7e-19, Sum P(5) = 4.7e-19
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 518 SSNFSAYADGENMLCDM-ILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDS 576
S +F++ + G + + LGA + ++ EVL K++ S+ SG A C
Sbjct: 303 SGSFASQSSGFSHSSSLKSLGA-VDSSDRKIEVLPKIVTVTQSS---SGDATA-CATTTH 357
Query: 577 LVKEKFAKKKQLLRFKE 593
L +E ++KKQ L + E
Sbjct: 358 LSEEMSSRKKQRLGWGE 374
Score = 41 (19.5 bits), Expect = 3.4e-205, Sum P(6) = 3.4e-205
Identities = 17/66 (25%), Positives = 26/66 (39%)
Query: 1115 DQKNAVELFKTAVRDKVAEQGAVSVSAGEESDPCPSSSNAVEETNDVVAEASTEG-FGNG 1173
DQ + F + +D V + + ++G E + PS E + V E TE G
Sbjct: 1320 DQGATMPKFSSKNQDGVMQAANRTRNSGLEPESAPSGFRYPECLHHVPIEVCTENPIGVS 1379
Query: 1174 LERYQP 1179
R P
Sbjct: 1380 APRGNP 1385
Score = 40 (19.1 bits), Expect = 2.3e-18, Sum P(5) = 2.3e-18
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 695 EKMSSRFISSNGLVEDPCAVEKERAMINP 723
E+MSSR G E EK++ +NP
Sbjct: 360 EEMSSRKKQRLGWGEGLAKYEKKKVDVNP 388
Score = 37 (18.1 bits), Expect = 4.6e-18, Sum P(5) = 4.6e-18
Identities = 21/92 (22%), Positives = 34/92 (36%)
Query: 865 ETAAADVLAGICGSLSSEAMSSCITSSVDPAEGQRDWRRQKADSVMRLPSTSDVTQNVDD 924
++++ D A + SE MSS + EG + ++K D V N D
Sbjct: 343 QSSSGDATACATTTHLSEEMSSRKKQRLGWGEGLAKYEKKKVD----------VNPNEDG 392
Query: 925 DTCSDESCGEMDPSDWTDEEKSIFIQAVTSYG 956
T + E+ + +KS V YG
Sbjct: 393 TTLMENGLEELHSLNKNIADKSPTAAIVPDYG 424
Score = 37 (18.1 bits), Expect = 2.3e-17, Sum P(5) = 2.3e-17
Identities = 10/41 (24%), Positives = 22/41 (53%)
Query: 280 GSPSIVSQNHREGFLFNLEKLDTNSIGNLGSSLVELLQYDD 320
G PS+VS++ R+ N + + + G S+ + ++ D+
Sbjct: 1242 GFPSLVSESCRDLVDINTVESQSQAAGKSKSNDLMSMEIDE 1282
>ZFIN|ZDB-GENE-030616-81 [details] [associations]
symbol:ncor2 "nuclear receptor co-repressor 2"
species:7955 "Danio rerio" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0030097 "hemopoiesis" evidence=IMP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
ZFIN:ZDB-GENE-030616-81 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0030097 GeneTree:ENSGT00550000074554
EMBL:AL590153 EMBL:CABZ01054154 EMBL:CABZ01054155 EMBL:CABZ01054156
EMBL:CABZ01054157 IPI:IPI00932107 Ensembl:ENSDART00000051139
ArrayExpress:E7FF48 Bgee:E7FF48 Uniprot:E7FF48
Length = 2325
Score = 224 (83.9 bits), Expect = 2.8e-19, Sum P(3) = 2.8e-19
Identities = 67/288 (23%), Positives = 134/288 (46%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
L +I N++ A EA +L+ L PR + + + ++++ + +KK +L
Sbjct: 225 LVQIIYDENRKKAEEAHRILEGLGPR--VELPLYNQPSDTKQYHENIKINQAMRKKLILY 282
Query: 591 FK---------ERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKH 641
FK E+ ++ W + + + R + K + +K
Sbjct: 283 FKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQ 342
Query: 642 RS---SIRSRFSSPAGNLSLV-----QTAEVINFTSKLLSDSQIKTYRNSLKMPALILDK 693
R +++R + G L+ + +E+I+ S+ ++ K R +P ++ D
Sbjct: 343 RELQERMQNRVAQRGGGLASAARSEHEVSEIIDGISE--QENSEKQMRQLAVIPPMLFDA 400
Query: 694 KEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYK 753
E+ +FI+ NGL++DP V K+R ++N W+ +E++ F +K K+F IASFL K
Sbjct: 401 -EQQRIKFINMNGLMDDPMKVYKDRQVMNMWSEQEKDTFREKFIQHPKNFALIASFLERK 459
Query: 754 TTADCVEFYYKNHKSDCFEKLKKKHDFSKQGKTSTNTYLVTTGKRNRK 801
T A+CV FYY K++ ++ + ++ + ++G++ N RN +
Sbjct: 460 TVAECVLFYYLTKKNENYKNIVRR-SYRRRGRSQNNQQAQQQVNRNNQ 506
Score = 120 (47.3 bits), Expect = 2.8e-19, Sum P(3) = 2.8e-19
Identities = 57/242 (23%), Positives = 104/242 (42%)
Query: 915 TSDVTQNVDDDTC---SDESCGEMDPSD-WTDEEKSIFIQAVTSYGKDFSMIARCIRTRS 970
T +T +++T S+ + EM+ S WT+EE + + YG+++S IA+ + +++
Sbjct: 569 TRSMTNEQEENTSPLGSELANLEMNESSRWTEEEMETAKKGLLQYGRNWSAIAKMVGSKT 628
Query: 971 RDQCKVFFSKARKCLGLDLIHTGRGNVGPSVNDDANGGGSDTEDACVLETSSVNCSDKLG 1030
QCK F+ +K LD I + + A G ++ E S+ + ++
Sbjct: 629 VSQCKNFYFNYKKRQKLDEI-LQQHKIKSEKERKARRKGKAPQNE---EASAPSAAE--- 681
Query: 1031 SKTDEELPSHVIHSNQEESCSAGAKNLQTDLNKPEDDNGITPLNDKDSEAVKPVNNDAFR 1090
+EE+ + N+EE+ G + N D + D VK + +
Sbjct: 682 ---EEEMEGSGVSGNEEEAQEDG----EGGANNSSDTESLPSPRSSDDSKVKEEGSARPK 734
Query: 1091 TESRSFELESNNMNGMDNQSESVLDQKNAVELF---KTAVRDKV-AEQG-AVSVSAGEES 1145
T + S+ M +E+ +D+K VE + V+ +V E G S SAGE+
Sbjct: 735 TAPNATSSSSSTDKDMA-AAETGMDEKPKVEKGDGEQAGVKQEVKTEPGEGASESAGEDK 793
Query: 1146 DP 1147
P
Sbjct: 794 KP 795
Score = 47 (21.6 bits), Expect = 2.8e-19, Sum P(3) = 2.8e-19
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 1132 AEQGAVSVSAGEESDPCPSSSNAVEETNDVVAEASTE 1168
AEQG S S S P P+ + + E+N + ++ E
Sbjct: 2067 AEQGMGSRSPASSSQP-PAFFSKLTESNSAIVKSKKE 2102
Score = 41 (19.5 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 27/109 (24%), Positives = 45/109 (41%)
Query: 1416 PSSSQKSAFSSHDNGENGHHHKQSSKASNLKFTAHHPPDGGA-----------ALLKFDR 1464
P S + S S +N + H + K T P + G+ A L F+R
Sbjct: 1434 PPSHRASPLSGRENSQRAHEGSSKPQQQERKATPT-PREMGSTKSPLAVGEHTANLAFER 1492
Query: 1465 NNYVGLENGPAR-SYGFWDGSKIQTGFSSLP-DSAILLAKYPAAFGGYP 1511
+G + ++ S+ +D + + G +P DSA L ++ A GYP
Sbjct: 1493 ILGLGPDMYRSQMSHLTFDAAALPRG---IPIDSAYYLPRHLAPGPGYP 1538
Score = 39 (18.8 bits), Expect = 1.8e-18, Sum P(3) = 1.8e-18
Identities = 34/152 (22%), Positives = 55/152 (36%)
Query: 1395 SDTEKPSKNGDVKLFGKILSHPSS-SQKSAFSSHDNGENGHHHKQSSKASNLKFTAHHPP 1453
SD + + G ++S PSS S+ S + + HH + K +++ PP
Sbjct: 1377 SDRARYEEAGGKSRPSAVVSAPSSLSRVSPLALSGEQSSRPHHSPVGYEDH-KRSSYPPP 1435
Query: 1454 DGGAALLKFDRNNYVGLENGPARSYGFWDGSKIQTGFSSLPDSAILLAKYPAAFGGYPAS 1513
A+ L G EN G + + + P + K P A G + A+
Sbjct: 1436 SHRASPLS-------GRENSQRAHEGSSKPQQQERKATPTPRE-MGSTKSPLAVGEHTAN 1487
Query: 1514 SSKMEQQSLQAAVVKSNERHLNGVAVVPPREI 1545
+ L + +S HL A PR I
Sbjct: 1488 LAFERILGLGPDMYRSQMSHLTFDAAALPRGI 1519
Score = 39 (18.8 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 19/90 (21%), Positives = 36/90 (40%)
Query: 861 GGERETAAADVLA-GICGSLSSEAMSSCITSSVDPAEGQRDWRRQKADSVMRLPS--TSD 917
GGER ++ + V + G C + +++ + + G + MRLPS
Sbjct: 2226 GGERPSSVSSVHSEGDCNRHTP--LTNRVWEDRPSSTGPTPFPCNPLTMGMRLPSGIMPG 2283
Query: 918 VTQNVDDDTCSDESCGEMDPSDWTDEEKSI 947
+ + S + G+ P W +E K +
Sbjct: 2284 PSPSPTHPGASAPTQGQTQPRTWEEEPKPL 2313
>UNIPROTKB|E9PGV6 [details] [associations]
symbol:NCOR1 "Nuclear receptor corepressor 1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 UniGene:Hs.462323 GeneID:9611 KEGG:hsa:9611
CTD:9611 HGNC:HGNC:7672 KO:K04650 ChiTaRS:NCOR1 GenomeRNAi:9611
NextBio:36055 EMBL:AC002553 EMBL:AC005971 IPI:IPI00793060
RefSeq:NP_001177367.1 ProteinModelPortal:E9PGV6 SMR:E9PGV6
PRIDE:E9PGV6 Ensembl:ENST00000395848 UCSC:uc002gpr.3
ArrayExpress:E9PGV6 Bgee:E9PGV6 Uniprot:E9PGV6
Length = 914
Score = 207 (77.9 bits), Expect = 7.8e-19, Sum P(2) = 7.8e-19
Identities = 63/272 (23%), Positives = 124/272 (45%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
+ +I N++ A EA ++ + L P+ + + + ++++ + +KK +L
Sbjct: 126 IVQIIYDENRKKAEEAHKIFEGLGPK--VELPLYNQPSDTKVYHENIKTNQVMRKKLILF 183
Query: 591 FK---------ERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKH 641
FK E+ + ++ W + + + R + K + +K
Sbjct: 184 FKRRNHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQ 243
Query: 642 RSSIR--SRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILDK 693
R R LS + +E+I+ S+ ++ K R +P ++ D
Sbjct: 244 REQQERFQRVGQRGAGLSATIARSEHEISEIIDGLSE--QENNEKQMRQLSVIPPMMFDA 301
Query: 694 KEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYK 753
+++ +FI+ NGL+EDP V K+R +N WT E+EIF DK K+F IAS+L K
Sbjct: 302 EQRRV-KFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDKFIQHPKNFGLIASYLERK 360
Query: 754 TTADCVEFYYKNHKSDCFEKLKKKHDFSKQGK 785
+ DCV +YY K++ ++ L +++ ++G+
Sbjct: 361 SVPDCVLYYYLTKKNENYKALVRRNYGKRRGR 392
Score = 116 (45.9 bits), Expect = 7.8e-19, Sum P(2) = 7.8e-19
Identities = 52/223 (23%), Positives = 92/223 (41%)
Query: 935 MDPSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLI---H 991
++ S WT+EE + + + +G++++ IA+ + T+S QCK F+ ++ LD + H
Sbjct: 514 VETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQH 573
Query: 992 TGRGNVGPSVNDDANGGGSDTEDACVLETSSVNCSDKLGSKTDEELPSHVIHSNQEESCS 1051
+ + P D S E V T S + + + +EE P +
Sbjct: 574 KQKTSRKPREERDV----SQCES--VASTVSAQEDEDIEASNEEENPEDSEGAENSSDTE 627
Query: 1052 AGAKNLQTDLNKPEDD---NGITPLNDKDSEAVKPVNNDAFRTESRSFELESNNMNGMDN 1108
+ + KP +D N + N + + ++P A T S S + S
Sbjct: 628 SAPSPSPVEAVKPSEDSPENATSRGNTEPAVELEPTTETAPST-SPSLAVPSTK----PA 682
Query: 1109 QSESVLDQKNAVELFKTAVRDKVAEQGAVSVSAGEESDPCPSS 1151
+ ESV Q N +TA + V +Q S G DP P++
Sbjct: 683 EDESVETQVNDSISAETAEQMDVDQQEH-SAEEGSVCDPPPAT 724
Score = 48 (22.0 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 1134 QGAVSVSAGEESDPCPSSSNAVEETNDVVAEASTEG 1169
+GA + S+ ES P PS AV+ + D A++ G
Sbjct: 618 EGAEN-SSDTESAPSPSPVEAVKPSEDSPENATSRG 652
Score = 42 (19.8 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 1368 SSVTELPFLAENIEQTSDRRRAHSCSFSDTEKPSKN 1403
S+ E P +E E +SD A S S + KPS++
Sbjct: 608 SNEEENPEDSEGAENSSDTESAPSPSPVEAVKPSED 643
Score = 41 (19.5 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 30/147 (20%), Positives = 65/147 (44%)
Query: 1019 ETSSVNCSDKLGSKTDEELP-SHVIHSNQEES-C----SAGAKNLQTDLNKPED------ 1066
E+ +D + ++T E++ HS +E S C + A ++ ++ PE+
Sbjct: 685 ESVETQVNDSISAETAEQMDVDQQEHSAEEGSVCDPPPATKADSVDVEVRVPENHASKVE 744
Query: 1067 -DNGITPLNDKDSEAVKPVNND---AFRTESRSFELESNNMNGMDNQSESVLD-QKNAVE 1121
DN D+ SE V+P + D A + ++ E +S+N + ++ +D +
Sbjct: 745 GDNTKERDLDRASEKVEPRDEDLVVAQQINAQRPEPQSDNDSSATCSADEDVDGEPERQR 804
Query: 1122 LFKTAVRDKVAEQ-GAVSVSAGEESDP 1147
+F + + G++ VS+ + +P
Sbjct: 805 MFPMDSKPSLLNPTGSILVSSPLKPNP 831
>UNIPROTKB|O75376 [details] [associations]
symbol:NCOR1 "Nuclear receptor corepressor 1" species:9606
"Homo sapiens" [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0002361
"CD4-positive, CD25-positive, alpha-beta regulatory T cell
differentiation" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0014067 "negative regulation of
phosphatidylinositol 3-kinase cascade" evidence=IEA] [GO:0021794
"thalamus development" evidence=IEA] [GO:0031065 "positive
regulation of histone deacetylation" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0035033
"histone deacetylase regulator activity" evidence=IEA] [GO:0040014
"regulation of multicellular organism growth" evidence=IEA]
[GO:0042632 "cholesterol homeostasis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0046965 "retinoid
X receptor binding" evidence=IEA] [GO:0046966 "thyroid hormone
receptor binding" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0051225 "spindle assembly"
evidence=IMP] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP;TAS] [GO:0005876 "spindle
microtubule" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=IDA;IMP] [GO:0046329 "negative regulation of JNK
cascade" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0044428 "nuclear part"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0007179 "transforming growth factor beta receptor
signaling pathway" evidence=TAS] [GO:0007219 "Notch signaling
pathway" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0044255 "cellular lipid metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0042826 "histone deacetylase binding" evidence=IPI] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISS]
[GO:0072362 "regulation of glycolysis by negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0016580 "Sin3
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IC]
[GO:2000191 "regulation of fatty acid transport" evidence=IC]
[GO:0072368 "regulation of lipid transport by negative regulation
of transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IPI] Reactome:REACT_71 Reactome:REACT_111217
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0048471 Reactome:REACT_111045 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0051225 GO:GO:0044281
GO:GO:0043565 GO:GO:0040014 GO:GO:0007219 GO:GO:0003700
GO:GO:0044255 GO:GO:0003682 GO:GO:0016568 GO:GO:0042632
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0044212
GO:GO:0000790 GO:GO:0021549 GO:GO:0007179 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0032922 eggNOG:NOG12793 GO:GO:0046329
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0006367
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0005876
Reactome:REACT_24941 GO:GO:0021794 GO:GO:0031065 GO:GO:0060318
GO:GO:0002361 PDB:3H52 PDBsum:3H52 GO:GO:0014067 GO:GO:0035033
EMBL:AF044209 EMBL:AB028970 EMBL:CH471222 EMBL:BC167431
EMBL:AB019524 IPI:IPI00410351 IPI:IPI00939364 RefSeq:NP_001177369.1
RefSeq:NP_006302.2 UniGene:Hs.462323 PDB:2EQR PDB:3KMZ PDB:3N00
PDBsum:2EQR PDBsum:3KMZ PDBsum:3N00 ProteinModelPortal:O75376
SMR:O75376 DIP:DIP-29402N IntAct:O75376 MINT:MINT-205170
STRING:O75376 PhosphoSite:O75376 PaxDb:O75376 PRIDE:O75376
Ensembl:ENST00000268712 Ensembl:ENST00000395851 GeneID:9611
KEGG:hsa:9611 UCSC:uc002gpn.3 UCSC:uc002gpo.3 CTD:9611
GeneCards:GC17M015933 HGNC:HGNC:7672 MIM:600849 neXtProt:NX_O75376
PharmGKB:PA31477 HOGENOM:HOG000113746 HOVERGEN:HBG052587 KO:K04650
OMA:PPMDRIT OrthoDB:EOG4J6RQ2 PhylomeDB:O75376 ChiTaRS:NCOR1
EvolutionaryTrace:O75376 GenomeRNAi:9611 NextBio:36055
ArrayExpress:O75376 Bgee:O75376 CleanEx:HS_NCOR1
Genevestigator:O75376 GermOnline:ENSG00000141027 GO:GO:2000191
GO:GO:0072362 GO:GO:0072368 Uniprot:O75376
Length = 2440
Score = 207 (77.9 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 63/272 (23%), Positives = 124/272 (45%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
+ +I N++ A EA ++ + L P+ + + + ++++ + +KK +L
Sbjct: 235 IVQIIYDENRKKAEEAHKIFEGLGPK--VELPLYNQPSDTKVYHENIKTNQVMRKKLILF 292
Query: 591 FK---------ERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKH 641
FK E+ + ++ W + + + R + K + +K
Sbjct: 293 FKRRNHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQ 352
Query: 642 RSSIR--SRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILDK 693
R R LS + +E+I+ S+ ++ K R +P ++ D
Sbjct: 353 REQQERFQRVGQRGAGLSATIARSEHEISEIIDGLSE--QENNEKQMRQLSVIPPMMFDA 410
Query: 694 KEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYK 753
+++ +FI+ NGL+EDP V K+R +N WT E+EIF DK K+F IAS+L K
Sbjct: 411 EQRRV-KFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDKFIQHPKNFGLIASYLERK 469
Query: 754 TTADCVEFYYKNHKSDCFEKLKKKHDFSKQGK 785
+ DCV +YY K++ ++ L +++ ++G+
Sbjct: 470 SVPDCVLYYYLTKKNENYKALVRRNYGKRRGR 501
Score = 121 (47.7 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 114/538 (21%), Positives = 191/538 (35%)
Query: 935 MDPSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLI---H 991
++ S WT+EE + + + +G++++ IA+ + T+S QCK F+ ++ LD + H
Sbjct: 623 VETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQH 682
Query: 992 TGRGNVGPSVNDDANGGGSDTEDACVLETSSVNCSDKLGSKTDEELPS-HVIHSNQEESC 1050
+ + P D + S E + S++ + D E+ + + E +
Sbjct: 683 KQKTSRKPREERDVSQCESVASTVSAQEDEDIEASNEEENPEDSEVEAVKPSEDSPENAT 742
Query: 1051 SAGAKNLQTDLNKPEDDNGITPLNDKDSEAVKPVNNDAFRTE-SRSFELESNNMNGMDNQ 1109
S G +L +P + + + KP +++ T+ + S E+ +D Q
Sbjct: 743 SRGNTEPAVEL-EPTTETAPSTSPSLAVPSTKPAEDESVETQVNDSISAETAEQMDVDQQ 801
Query: 1110 SES-----VLDQKNAVELFKTAVRDKVAEQGAVSVSAG--EESDPCPSSSNAVEETNDVV 1162
S V D A + V +V E A V +E D +S D+V
Sbjct: 802 EHSAEEGSVCDPPPATKADSVDVEVRVPENHASKVEGDNTKERDLDRASEKVEPRDEDLV 861
Query: 1163 AEASTEGFGNGLERYQPMLLENSLNDVRDKICNVDACGESEIVQDSNTTGSAFDLYXXXX 1222
+R +P S ND C+ D + E D
Sbjct: 862 VAQQINA-----QRPEPQ----SDND-SSATCSADEDVDGE---PERQRMFPMDSKPSLL 908
Query: 1223 XXXXXXXXXXXXKPPLISLPQWNSHPAAASTQDSSVIQCEKAFIQDRMSSTLEFQRSKDK 1282
KP + LPQ H AA S C I +S +QR K
Sbjct: 909 NPTGSILVSSPLKPNPLDLPQLQ-HRAAVIPPMVSCTPCNIP-IGTPVSGYALYQRHI-K 965
Query: 1283 SGHKSVVSDDYRQHLSVHSIVNHVESPQILNGYPLPISTKKEMNGDINCRQLSEVQSISK 1342
+ H+S + ++ RQ + + P T K N + Q + Q I+
Sbjct: 966 AMHESALLEEQRQRQEQIDLECRSSTS--------PCGTSKSPNREWEVLQPAPHQVITN 1017
Query: 1343 SDRNIDEPYLAQDCYLRKCNSSMPHSSVT---ELP--FLAENIEQTSDRR--RAHS-CSF 1394
+ P R +P S T E P + +I Q + +H+ S+
Sbjct: 1018 LPEGVRLPTTRPT---RPPPPLIPSSKTTVASEKPSFIMGGSISQGTPGTYLTSHNQASY 1074
Query: 1395 S-DTEKPSKNGDVKLFGKILSHPSSSQKSAFSSHDNGENGHHHKQSSKASNLKFTAHH 1451
+ +T KPS G + L G L S KSA + E Q+S+ L A H
Sbjct: 1075 TQETPKPSV-GSISL-G--LPRQQESAKSATLPYIKQEEFSPRSQNSQPEGLLVRAQH 1128
Score = 75 (31.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARK 983
WTD EK IF + K+F +IA + +S C +++ +K
Sbjct: 440 WTDHEKEIFKDKFIQHPKNFGLIASYLERKSVPDCVLYYYLTKK 483
Score = 43 (20.2 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 19/65 (29%), Positives = 27/65 (41%)
Query: 1338 QSISKSDRNIDEPYLAQDCYLRKCNSSMPHSSVTELPFLAENIEQTSDRRRAHSCSFSDT 1397
Q +S + + P C R PHS + E L+ +I Q + R A + SF D
Sbjct: 1256 QGMSMRESPVSAPLEGLIC--RALPRGSPHSDLKERTVLSGSIMQGTPR--ATTESFEDG 1311
Query: 1398 EKPSK 1402
K K
Sbjct: 1312 LKYPK 1316
Score = 41 (19.5 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 17/77 (22%), Positives = 30/77 (38%)
Query: 1385 DRRRAHSC-SFSDTEKPSKNGDVKLFGKILSHPSSSQKSAFS-SHDNGENGHHHKQSSKA 1442
+ R C S + T ++ D++ + +P S+ A S D+ EN + A
Sbjct: 692 EERDVSQCESVASTVSAQEDEDIEASNEE-ENPEDSEVEAVKPSEDSPENATSRGNTEPA 750
Query: 1443 SNLKFTAHHPPDGGAAL 1459
L+ T P +L
Sbjct: 751 VELEPTTETAPSTSPSL 767
>UNIPROTKB|E2RKW5 [details] [associations]
symbol:NCOR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 OMA:PPMDRIT GeneTree:ENSGT00550000074554
EMBL:AAEX03003692 EMBL:AAEX03003691 Ensembl:ENSCAFT00000028704
Uniprot:E2RKW5
Length = 2444
Score = 207 (77.9 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
Identities = 63/272 (23%), Positives = 124/272 (45%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
+ +I N++ A EA ++ + L P+ + + + ++++ + +KK +L
Sbjct: 235 IVQIIYDENRKKAEEAHKIFEGLGPK--VELPLYNQPSDTKVYHENIKTNQVMRKKLILF 292
Query: 591 FK---------ERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKH 641
FK E+ + ++ W + + + R + K + +K
Sbjct: 293 FKRRNHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQ 352
Query: 642 RSSIR--SRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILDK 693
R R LS + +E+I+ S+ ++ K R +P ++ D
Sbjct: 353 REQQERFQRVGQRGAGLSATIARSEHEISEIIDGLSE--QENNEKQMRQLSVIPPMMFDA 410
Query: 694 KEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYK 753
+++ +FI+ NGL+EDP V K+R +N WT E+EIF DK K+F IAS+L K
Sbjct: 411 EQRRV-KFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDKFIQHPKNFGLIASYLERK 469
Query: 754 TTADCVEFYYKNHKSDCFEKLKKKHDFSKQGK 785
+ DCV +YY K++ ++ L +++ ++G+
Sbjct: 470 SVPDCVLYYYLTKKNENYKALVRRNYGKRRGR 501
Score = 110 (43.8 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
Identities = 83/373 (22%), Positives = 144/373 (38%)
Query: 935 MDPSDWTDEEKSIFIQAV--TSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLI-- 990
++ S WT+EE + + + +G++++ IA+ + T+S QCK F+ ++ LD +
Sbjct: 624 VETSRWTEEEMEVAKKDIGLVEHGRNWAAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQ 683
Query: 991 -HTGRGNVGPSVNDDANGGGSDTEDACVLETSSVNCSDKLGSKTDEELPSHVIHSNQEES 1049
H + + P D + S E + S++ + D E+ + V S +S
Sbjct: 684 QHKQKTSRKPREERDVSQCESVASTVSAQEDEDIEASNEEENPEDSEVEA-VKPSG--DS 740
Query: 1050 CSAGAKNLQTDLNKPEDDNGITPL-NDKDSEAV---KPVNNDAFRTESR-SFELESNNMN 1104
G T+ E ++ + P + S AV KPV +++ ++ S +E+
Sbjct: 741 TDNGTSRGNTEPGA-ELESTVEPAPSTSPSSAVQSAKPVESESAEAQANDSIAVEAAEPM 799
Query: 1105 GMDNQSESVLDQKNAVELFKTAVRDKVAEQGAVSVS--AGEESDPCPSSSNAVEETNDVV 1162
+++Q S + + +EL TA D V + V S + E D V E +
Sbjct: 800 DIEHQEHSA-EGTSVLELPTTAKSDSVDVEMRVPESNPSKVEGDTKERDLERVGEKTEPR 858
Query: 1163 AEASTEGFGNGLERYQPMLLENSLNDVRDKICNVDACGESEIVQDSNTTGSAFDLYXXXX 1222
E G +R +P S ND C+ D + E D
Sbjct: 859 DEDLVVAQQIGTQRPEPQ----SDND-SSATCSADEDVDGE---PERQRMFPMDSKPSLL 910
Query: 1223 XXXXXXXXXXXXKPPLISLPQWNSHPAAASTQDSSVIQCEKAFIQDRMSSTLEFQRSKDK 1282
KP + LPQ H AA S C I +S +QR K
Sbjct: 911 NPPGSILVSSPIKPNPLDLPQLQ-HRAAVIPPMVSCTPCNIP-IGTPVSGYALYQRHI-K 967
Query: 1283 SGHKSVVSDDYRQ 1295
+ H+S + ++ RQ
Sbjct: 968 AMHESALLEEQRQ 980
Score = 45 (20.9 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 13/54 (24%), Positives = 26/54 (48%)
Query: 878 SLSSEAMSSCITSSVDPAEGQRDWRRQKADSVMRLPSTSDVTQNVDDDTCSDES 931
S ++A S + +P + + + SV+ LP+T+ + +VD + ES
Sbjct: 782 SAEAQANDSIAVEAAEPMDIEHQEHSAEGTSVLELPTTAK-SDSVDVEMRVPES 834
Score = 42 (19.8 bits), Expect = 6.7e-09, Sum P(3) = 6.7e-09
Identities = 20/93 (21%), Positives = 42/93 (45%)
Query: 1484 SKIQTGFSSLPDSAILLAKYPAAFGGYPASSSKMEQQSLQAAVVKSNERHLNGVAVVPPR 1543
S ++ S+ P SA+ AK + ++ + ++ + ++ E G +V+
Sbjct: 758 STVEPAPSTSPSSAVQSAKPVESESAEAQANDSIAVEAAEPMDIEHQEHSAEGTSVLELP 817
Query: 1544 EISSSNGV-VDYQVYRSREGNKVQPFSVDMKQR 1575
+ S+ V V+ +V S +KV+ D K+R
Sbjct: 818 TTAKSDSVDVEMRVPESNP-SKVEG---DTKER 846
Score = 41 (19.5 bits), Expect = 6.7e-09, Sum P(3) = 6.7e-09
Identities = 15/71 (21%), Positives = 29/71 (40%)
Query: 1385 DRRRAHSC-SFSDTEKPSKNGDVKLFGKILSHPSSSQKSAFS-SHDNGENGHHHKQSSKA 1442
+ R C S + T ++ D++ + +P S+ A S D+ +NG +
Sbjct: 695 EERDVSQCESVASTVSAQEDEDIEASNEE-ENPEDSEVEAVKPSGDSTDNGTSRGNTEPG 753
Query: 1443 SNLKFTAHHPP 1453
+ L+ T P
Sbjct: 754 AELESTVEPAP 764
>MGI|MGI:1349717 [details] [associations]
symbol:Ncor1 "nuclear receptor co-repressor 1" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IGI;IMP] [GO:0000790
"nuclear chromatin" evidence=ISO] [GO:0001012 "RNA polymerase II
regulatory region DNA binding" evidence=ISO] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=ISO] [GO:0002361 "CD4-positive, CD25-positive, alpha-beta
regulatory T cell differentiation" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=ISO;IGI] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005876
"spindle microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO] [GO:0010629 "negative regulation of gene expression"
evidence=ISO] [GO:0014067 "negative regulation of
phosphatidylinositol 3-kinase cascade" evidence=IMP] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO;IPI] [GO:0019904 "protein domain
specific binding" evidence=ISO;IPI] [GO:0021794 "thalamus
development" evidence=IMP] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0031065 "positive regulation of histone
deacetylation" evidence=IDA] [GO:0032922 "circadian regulation of
gene expression" evidence=IGI] [GO:0035033 "histone deacetylase
regulator activity" evidence=IDA;IMP] [GO:0040014 "regulation of
multicellular organism growth" evidence=IGI] [GO:0042632
"cholesterol homeostasis" evidence=IMP] [GO:0042826 "histone
deacetylase binding" evidence=ISO] [GO:0042974 "retinoic acid
receptor binding" evidence=ISO;IDA] [GO:0042975 "peroxisome
proliferator activated receptor binding" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0044428 "nuclear part" evidence=ISO;IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO;IDA;IMP]
[GO:0046329 "negative regulation of JNK cascade" evidence=ISO]
[GO:0046965 "retinoid X receptor binding" evidence=ISO;IDA]
[GO:0046966 "thyroid hormone receptor binding" evidence=IDA;IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0050790 "regulation of catalytic activity" evidence=IDA;IMP]
[GO:0051225 "spindle assembly" evidence=ISO] [GO:0060318
"definitive erythrocyte differentiation" evidence=IMP] [GO:0072362
"regulation of glycolysis by negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0072368
"regulation of lipid transport by negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
MGI:MGI:1349717 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
GO:GO:0043565 GO:GO:0040014 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 GO:GO:0042632 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
Reactome:REACT_127416 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0032922 eggNOG:NOG12793 GO:GO:0046966 GO:GO:0046965
Reactome:REACT_27166 GO:GO:0021794 GO:GO:0031065 GO:GO:0060318
GO:GO:0002361 GO:GO:0014067 GO:GO:0035033 HOVERGEN:HBG052587
OrthoDB:EOG4J6RQ2 ChiTaRS:NCOR1 EMBL:U35312 EMBL:U22016
IPI:IPI00274795 IPI:IPI00620682 PIR:S60254 UniGene:Mm.271814
UniGene:Mm.460227 ProteinModelPortal:Q60974 SMR:Q60974
DIP:DIP-32548N IntAct:Q60974 MINT:MINT-2981744 STRING:Q60974
PhosphoSite:Q60974 PaxDb:Q60974 PRIDE:Q60974 InParanoid:Q60974
CleanEx:MM_NCOR1 Genevestigator:Q60974
GermOnline:ENSMUSG00000018501 Uniprot:Q60974
Length = 2453
Score = 207 (77.9 bits), Expect = 1.0e-16, Sum P(3) = 1.0e-16
Identities = 63/272 (23%), Positives = 124/272 (45%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
+ +I N++ A EA ++ + L P+ + + + ++++ + +KK +L
Sbjct: 235 IVQIIYDENRKKAEEAHKIFEGLGPK--VELPLYNQPSDTKVYHENIKTNQVMRKKLILF 292
Query: 591 FK---------ERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKH 641
FK E+ + ++ W + + + R + K + +K
Sbjct: 293 FKRRNHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQ 352
Query: 642 RSSIR--SRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILDK 693
R R LS + +E+I+ S+ ++ K R +P ++ D
Sbjct: 353 REQQERFQRVGQRGAGLSATIARSEHEISEIIDGLSE--QENNEKQMRQLSVIPPMMFDA 410
Query: 694 KEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYK 753
+++ +FI+ NGL+EDP V K+R +N WT E+EIF DK K+F IAS+L K
Sbjct: 411 EQRRV-KFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDKFIQHPKNFGLIASYLERK 469
Query: 754 TTADCVEFYYKNHKSDCFEKLKKKHDFSKQGK 785
+ DCV +YY K++ ++ L +++ ++G+
Sbjct: 470 SVPDCVLYYYLTKKNENYKALVRRNYGKRRGR 501
Score = 114 (45.2 bits), Expect = 1.0e-16, Sum P(3) = 1.0e-16
Identities = 48/247 (19%), Positives = 99/247 (40%)
Query: 935 MDPSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLI---H 991
++ S WT+EE + + + +G++++ IA+ + T+S QCK F+ ++ LD + H
Sbjct: 622 VETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQH 681
Query: 992 TGRGNVGPSVNDDANGGGSDTEDACVLETSSVNCSDKLGSKTDEELPSHVIHSNQEESCS 1051
+ + P D S E V T S + + + +EE P +
Sbjct: 682 KQKASRKPREERDV----SQCES--VASTVSAQEDEDIEASNEEENPEDSEGAENSSDTE 735
Query: 1052 AGAKNLQTDLNKPEDDNGITPLNDKDSEAVKPVN--NDAFRTESRSFELESNNMNGMDNQ 1109
+ + K +D+ + ++E V + D S S + + ++
Sbjct: 736 SAPSPSPVEAAKSSEDSSENAASRGNTEPVAELEATTDPAPCASPSSAVPTTKPAERESV 795
Query: 1110 SESVLDQKNAVELFKTAVRDKVAEQGAVSVSAGEESDPCPSSSNAVEETNDVVAEASTEG 1169
V D +A +TA V + + + P P+ +++V+ V +++G
Sbjct: 796 EAQVTDSASA----ETAEPMDVDHEECGAEGSSVLDPPAPTKADSVDPEMQVPENTASKG 851
Query: 1170 FGNGLER 1176
G+ ER
Sbjct: 852 EGDAKER 858
Score = 46 (21.3 bits), Expect = 1.0e-16, Sum P(3) = 1.0e-16
Identities = 19/65 (29%), Positives = 26/65 (40%)
Query: 1338 QSISKSDRNIDEPYLAQDCYLRKCNSSMPHSSVTELPFLAENIEQTSDRRRAHSCSFSDT 1397
Q +S + + P C R PHS + E L+ +I Q + R A S F D
Sbjct: 1267 QGMSMRESPVSAPLEGLIC--RALPRGSPHSDLKERTVLSGSIMQGTPRATAES--FEDG 1322
Query: 1398 EKPSK 1402
K K
Sbjct: 1323 LKYPK 1327
Score = 46 (21.3 bits), Expect = 8.4e-10, Sum P(3) = 8.4e-10
Identities = 25/89 (28%), Positives = 39/89 (43%)
Query: 865 ETAAA-DVLAGICGSLSSEAM---SSCITSSVDPAEG--QRDWRRQKADSVMR-LPSTSD 917
ETA DV CG+ S + + SVDP + + + D+ R L STS+
Sbjct: 806 ETAEPMDVDHEECGAEGSSVLDPPAPTKADSVDPEMQVPENTASKGEGDAKERDLESTSE 865
Query: 918 VTQNVDDDTCSDESCGEMDPSDWTDEEKS 946
T+ D+D E +P +D++ S
Sbjct: 866 KTEARDEDVVVAEQIERPEPQ--SDDDSS 892
Score = 44 (20.5 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 15/60 (25%), Positives = 25/60 (41%)
Query: 1395 SDTEKPSKNGDVKLFGKILSHPSSSQ-KSAFSSHDNGENGHHHKQSSKASNLKFTAHHPP 1453
++ E P + + S PS S ++A SS D+ EN + + L+ T P
Sbjct: 717 NEEENPEDSEGAENSSDTESAPSPSPVEAAKSSEDSSENAASRGNTEPVAELEATTDPAP 776
Score = 40 (19.1 bits), Expect = 4.3e-16, Sum P(3) = 4.3e-16
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 1290 SDDYRQHLS-VHSIVNHVESPQILNGYPLPISTKKEMNGDI 1329
++ RQ+ +H + ESP PLP S++ E G +
Sbjct: 2020 NESTRQYEGPLHHYRSQQESPSPQQQPPLPPSSQSEGMGQV 2060
Score = 38 (18.4 bits), Expect = 6.8e-16, Sum P(3) = 6.8e-16
Identities = 17/69 (24%), Positives = 28/69 (40%)
Query: 1395 SDTEKPSKNGDVKLFGKILSHP---SSSQKSAFSSHDNGENGHHHKQSSKASNLKFTAHH 1451
S +EK + + + + P S SA S D G +G +Q + K +
Sbjct: 862 STSEKTEARDEDVVVAEQIERPEPQSDDDSSATCSADEGVDGEPERQRVFPMDAKPSLLT 921
Query: 1452 PPDGGAALL 1460
PP G+ L+
Sbjct: 922 PP--GSILI 928
>UNIPROTKB|F1SDC8 [details] [associations]
symbol:NCOR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072368 "regulation of lipid transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0072362 "regulation of glycolysis by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0046966 "thyroid hormone receptor binding" evidence=IEA]
[GO:0046965 "retinoid X receptor binding" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0042632 "cholesterol
homeostasis" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0035033 "histone deacetylase
regulator activity" evidence=IEA] [GO:0032922 "circadian regulation
of gene expression" evidence=IEA] [GO:0031065 "positive regulation
of histone deacetylation" evidence=IEA] [GO:0021794 "thalamus
development" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA]
[GO:0014067 "negative regulation of phosphatidylinositol 3-kinase
cascade" evidence=IEA] [GO:0005876 "spindle microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0002361 "CD4-positive, CD25-positive, alpha-beta
regulatory T cell differentiation" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005737 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0043565 GO:GO:0040014 GO:GO:0003700 GO:GO:0003682
GO:GO:0042632 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0032922 GO:GO:0046329
GO:GO:0005876 GO:GO:0021794 GO:GO:0016580 GO:GO:0031065
GO:GO:0060318 GO:GO:0002361 GO:GO:0014067 GO:GO:0035033 OMA:PPMDRIT
GO:GO:0072362 GO:GO:0072368 GeneTree:ENSGT00550000074554
EMBL:CU467081 Ensembl:ENSSSCT00000019634 Uniprot:F1SDC8
Length = 1952
Score = 207 (77.9 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 63/272 (23%), Positives = 124/272 (45%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
+ +I N++ A EA ++ + L P+ + + + ++++ + +KK +L
Sbjct: 155 IVQIIYDENRKKAEEAHKIFEGLGPK--VELPLYNQPSDTKVYHENIKTNQVMRKKLILF 212
Query: 591 FK---------ERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKH 641
FK E+ + ++ W + + + R + K + +K
Sbjct: 213 FKRRNHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQ 272
Query: 642 RSSIR--SRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILDK 693
R R LS + +E+I+ S+ ++ K R +P ++ D
Sbjct: 273 REQQERFQRVGQRGAGLSATIARSEHEISEIIDGLSE--QENNEKQMRQLSVIPPMMFDA 330
Query: 694 KEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYK 753
+++ +FI+ NGL+EDP V K+R +N WT E+EIF DK K+F IAS+L K
Sbjct: 331 EQRRV-KFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDKFIQHPKNFGLIASYLERK 389
Query: 754 TTADCVEFYYKNHKSDCFEKLKKKHDFSKQGK 785
+ DCV +YY K++ ++ L +++ ++G+
Sbjct: 390 SVPDCVLYYYLTKKNENYKALVRRNYGKRRGR 421
Score = 95 (38.5 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 24/105 (22%), Positives = 49/105 (46%)
Query: 935 MDPSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLI---H 991
++ S WT+EE + + + +G++++ IA+ + T+S QCK F+ ++ LD + H
Sbjct: 544 VETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQH 603
Query: 992 TGRGNVGPSVNDDANGGGSDTEDACVLETSSVNCSDKLGSKTDEE 1036
+ + P D + S E + S++ + D E
Sbjct: 604 KQKTSRKPREERDVSQCESVASTVSAQEDEDIEASNEEENPEDSE 648
>UNIPROTKB|F1MGM4 [details] [associations]
symbol:NCOR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072368 "regulation of lipid transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0072362 "regulation of glycolysis by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0046966 "thyroid hormone receptor binding" evidence=IEA]
[GO:0046965 "retinoid X receptor binding" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0042632 "cholesterol
homeostasis" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0035033 "histone deacetylase
regulator activity" evidence=IEA] [GO:0032922 "circadian regulation
of gene expression" evidence=IEA] [GO:0031065 "positive regulation
of histone deacetylation" evidence=IEA] [GO:0021794 "thalamus
development" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA]
[GO:0014067 "negative regulation of phosphatidylinositol 3-kinase
cascade" evidence=IEA] [GO:0005876 "spindle microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0002361 "CD4-positive, CD25-positive, alpha-beta
regulatory T cell differentiation" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005737 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0043565 GO:GO:0040014 GO:GO:0003700 GO:GO:0003682
GO:GO:0042632 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0032922 GO:GO:0046329
GO:GO:0005876 GO:GO:0021794 GO:GO:0016580 GO:GO:0031065
GO:GO:0060318 GO:GO:0002361 GO:GO:0014067 GO:GO:0035033 OMA:PPMDRIT
GO:GO:0072362 GO:GO:0072368 GeneTree:ENSGT00550000074554
EMBL:DAAA02048966 EMBL:DAAA02048965 IPI:IPI00923871
UniGene:Bt.48644 Ensembl:ENSBTAT00000061343 NextBio:20868163
ArrayExpress:F1MGM4 Uniprot:F1MGM4
Length = 2436
Score = 206 (77.6 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 63/269 (23%), Positives = 123/269 (45%)
Query: 534 MILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLRFK- 592
+I N++ A EA ++ + L P+ + + + ++++ + +KK +L FK
Sbjct: 240 IIYDENRKKAEEAHKIFEGLGPK--VELPLYNQPSDTKVYHENIKTNQVMRKKLILFFKR 297
Query: 593 --------ERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKHRSS 644
E+ + ++ W + + + R + K + +K R
Sbjct: 298 RNHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQREQ 357
Query: 645 IR--SRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILDKKEK 696
R LS + +E+I+ S+ ++ K R +P ++ D +++
Sbjct: 358 QERFQRVGQRGAGLSATIARSEHEISEIIDGLSE--QENNEKQMRQLSVIPPMMFDAEQR 415
Query: 697 MSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYKTTA 756
+FI+ NGL+EDP V K+R +N WT E+EIF DK K+F IAS+L K+
Sbjct: 416 RV-KFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDKFIQHPKNFGLIASYLERKSVP 474
Query: 757 DCVEFYYKNHKSDCFEKLKKKHDFSKQGK 785
DCV +YY K++ ++ L +++ ++G+
Sbjct: 475 DCVLYYYLTKKNENYKALVRRNYGKRRGR 503
Score = 103 (41.3 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 46/224 (20%), Positives = 90/224 (40%)
Query: 935 MDPSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLI---H 991
++ S WT+EE + + + +G++++ IA+ + T+S QCK F+ ++ LD + H
Sbjct: 625 VETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQH 684
Query: 992 TGRGNVGPSVNDDANGGGSDTEDACVLETSSVNCSDKLGSKTDEEL----PSHVIHSNQE 1047
+ + P D + S E + S++ + D E+ P N
Sbjct: 685 KQKASRKPREERDVSQCESVASTVSAQEDEDIEASNEEENPEDSEVEAVKPGEDSTENAP 744
Query: 1048 ESCSA-GAKNLQTD---LNKPEDDNGITPLNDKDSEAVKPVNNDAFRTESRS-FELESNN 1102
+A A L+ + +P + ++V+ ND+ ++ E+E
Sbjct: 745 PRGTAEAAAELEATPDAVPRPSPSPAAASTKVAEDDSVEAPANDSITVDTAEPMEVEHEE 804
Query: 1103 MNGMDNQSESVLDQKNAVELFKTAVRDKVAEQGAVSVSAGEESD 1146
+G + S LD +A + V +V E V G+ D
Sbjct: 805 -HGAEGTS--ALDLPSAAKADAVDVEMRVPESSPSRVE-GDPKD 844
Score = 64 (27.6 bits), Expect = 9.9e-12, Sum P(3) = 9.9e-12
Identities = 31/132 (23%), Positives = 53/132 (40%)
Query: 1056 NLQTDLNKPEDDNGITPLNDKDSEAVKPVNNDAFRTESRSFELESNNMNGMDNQSESVLD 1115
NL L + + P ++D + V + E E + N D++ E+V
Sbjct: 676 NLDNLLQQHKQKASRKPREERDVSQCESVASTVSAQEDEDIEASNEEENPEDSEVEAVKP 735
Query: 1116 QKNAVELFKTAVRDKVAEQGAVSVSAGEESDPCPSSSNAVEETNDVVAEASTEGFGNG-- 1173
+++ E A AE A + A ++ P PS S A T V + S E N
Sbjct: 736 GEDSTE---NAPPRGTAE-AAAELEATPDAVPRPSPSPAAASTK-VAEDDSVEAPANDSI 790
Query: 1174 -LERYQPMLLEN 1184
++ +PM +E+
Sbjct: 791 TVDTAEPMEVEH 802
Score = 48 (22.0 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 18/71 (25%), Positives = 33/71 (46%)
Query: 1376 LAENIEQ--TSDRRRAHSCSFSDTEKPSKNGDVKLFGKILSHPSSSQKS-AFSSHDNGEN 1432
LA++I Q T D R + S ++PS + ++S P ++ S +S ++
Sbjct: 2046 LADHICQIITQDFAR-NQVSSQPPQQPSTSTFQSSPSALVSTPVRTKTSNRYSPESQSQS 2104
Query: 1433 GHHHKQSSKAS 1443
HH + S+ S
Sbjct: 2105 AHHQRPGSRVS 2115
Score = 41 (19.5 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 19/72 (26%), Positives = 29/72 (40%)
Query: 1055 KNLQTDLNKPE---DDNGIT---------PLNDKDSEAVKPVNNDAFRTESRSFELESNN 1102
++LQ KPE DD G+ PL+D DS A + D R ++
Sbjct: 845 RDLQRSGEKPEPGEDDLGVAQQLSAPRPEPLSDHDSSATCSADEDVDGEPERQRMFPMDS 904
Query: 1103 MNGMDNQSESVL 1114
+ N + S+L
Sbjct: 905 KPSLLNPAGSIL 916
Score = 40 (19.1 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
Identities = 13/61 (21%), Positives = 23/61 (37%)
Query: 1397 TEKPSKNGDVKLFGKILSHPSSSQKSAFSSHDNGENGHHHKQSSKASNLKFTAHHPPDGG 1456
+ KP + DV + S S+ + + + EN + + T + PP G
Sbjct: 689 SRKPREERDVSQCESVASTVSAQEDEDIEASNEEENPEDSEVEAVKPGEDSTENAPPRGT 748
Query: 1457 A 1457
A
Sbjct: 749 A 749
>UNIPROTKB|J9P1J2 [details] [associations]
symbol:NCOR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GeneTree:ENSGT00550000074554 EMBL:AAEX03003692
EMBL:AAEX03003691 Ensembl:ENSCAFT00000049452 Uniprot:J9P1J2
Length = 1449
Score = 207 (77.9 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 63/272 (23%), Positives = 124/272 (45%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
+ +I N++ A EA ++ + L P+ + + + ++++ + +KK +L
Sbjct: 235 IVQIIYDENRKKAEEAHKIFEGLGPK--VELPLYNQPSDTKVYHENIKTNQVMRKKLILF 292
Query: 591 FK---------ERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKH 641
FK E+ + ++ W + + + R + K + +K
Sbjct: 293 FKRRNHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQ 352
Query: 642 RSSIR--SRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILDK 693
R R LS + +E+I+ S+ ++ K R +P ++ D
Sbjct: 353 REQQERFQRVGQRGAGLSATIARSEHEISEIIDGLSE--QENNEKQMRQLSVIPPMMFDA 410
Query: 694 KEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYK 753
+++ +FI+ NGL+EDP V K+R +N WT E+EIF DK K+F IAS+L K
Sbjct: 411 EQRRV-KFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDKFIQHPKNFGLIASYLERK 469
Query: 754 TTADCVEFYYKNHKSDCFEKLKKKHDFSKQGK 785
+ DCV +YY K++ ++ L +++ ++G+
Sbjct: 470 SVPDCVLYYYLTKKNENYKALVRRNYGKRRGR 501
Score = 97 (39.2 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 52/251 (20%), Positives = 101/251 (40%)
Query: 935 MDPSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLI---H 991
++ S WT+EE + + + +G++++ IA+ + T+S QCK F+ ++ LD + H
Sbjct: 624 VETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQH 683
Query: 992 TGRGNVGPSVNDDANGGGSDTEDACVLETSSVNCSDKLGSKTDEELPSHVIHSNQEESCS 1051
+ + P D + S E + S++ + D E + S+ ES
Sbjct: 684 KQKTSRKPREERDVSQCESVASTVSAQEDEDIEASNEEENPEDSEGAEN---SSDTESAP 740
Query: 1052 AGAKNLQTDLNKPEDDNGITPLNDKDS----EAVKPVNN--------DAFRTESRSFELE 1099
+ + + DNG + N + V+P + A ES S E +
Sbjct: 741 SPSPVEAVKPSGDSTDNGTSRGNTEPGAELESTVEPAPSTSPSSAVQSAKPVESESAEAQ 800
Query: 1100 SNNMNGMDNQSESVLD-QKNAVELFKTAVRDKVAEQGAVSVSAG-EESDPCPSSSNAVEE 1157
+N+ ++ ++ Q+++ E A+ +V V ES+P + E
Sbjct: 801 ANDSIAVEAAEPMDIEHQEHSAEGTSVLELPTTAKSDSVDVEMRVPESNPSKVEGDTKER 860
Query: 1158 TNDVVAEASTE 1168
+ V E TE
Sbjct: 861 DLERVGE-KTE 870
Score = 55 (24.4 bits), Expect = 5.6e-12, Sum P(2) = 5.6e-12
Identities = 38/183 (20%), Positives = 73/183 (39%)
Query: 1397 TEKPSKNGDVKLFGKILSHPSSSQKSAFSSHDNGENGHHHKQSSKASNLKFTAHHPPDGG 1456
+ KP + DV + S S+ + + + EN + S A N T P
Sbjct: 688 SRKPREERDVSQCESVASTVSAQEDEDIEASNEEENP---EDSEGAENSSDTESAPSPSP 744
Query: 1457 AALLKFDRNNYVGLENGPARSY---GFWDGSKIQTGFSSLPDSAILLAKYPAAFGGYPAS 1513
+K ++ +NG +R G S ++ S+ P SA+ AK + +
Sbjct: 745 VEAVKPSGDS---TDNGTSRGNTEPGAELESTVEPAPSTSPSSAVQSAKPVESESAEAQA 801
Query: 1514 SSKMEQQSLQAAVVKSNERHLNGVAVVPPREISSSNGV-VDYQVYRSREGNKVQPFSVDM 1572
+ + ++ + ++ E G +V+ + S+ V V+ +V S +KV+ D
Sbjct: 802 NDSIAVEAAEPMDIEHQEHSAEGTSVLELPTTAKSDSVDVEMRVPESNP-SKVEG---DT 857
Query: 1573 KQR 1575
K+R
Sbjct: 858 KER 860
Score = 45 (20.9 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 19/65 (29%), Positives = 27/65 (41%)
Query: 1338 QSISKSDRNIDEPYLAQDCYLRKCNSSMPHSSVTELPFLAENIEQTSDRRRAHSCSFSDT 1397
Q +S + + P C R PHS + E L+ +I Q + R A + SF D
Sbjct: 1272 QGLSMRESPVSAPLEGLIC--RALPRGSPHSDLKERTVLSGSIMQGTPR--ATTDSFEDG 1327
Query: 1398 EKPSK 1402
K K
Sbjct: 1328 LKYPK 1332
Score = 45 (20.9 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1134 QGAVSVSAGEESDPCPSSSNAVEETNDVVAEASTEG 1169
+GA + S+ ES P PS AV+ + D ++ G
Sbjct: 728 EGAEN-SSDTESAPSPSPVEAVKPSGDSTDNGTSRG 762
Score = 45 (20.9 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 13/54 (24%), Positives = 26/54 (48%)
Query: 878 SLSSEAMSSCITSSVDPAEGQRDWRRQKADSVMRLPSTSDVTQNVDDDTCSDES 931
S ++A S + +P + + + SV+ LP+T+ + +VD + ES
Sbjct: 796 SAEAQANDSIAVEAAEPMDIEHQEHSAEGTSVLELPTTAK-SDSVDVEMRVPES 848
Score = 41 (19.5 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 1368 SSVTELPFLAENIEQTSDRRRAHSCSFSDTEKPSKNGD 1405
S+ E P +E E +SD A S S + KPS GD
Sbjct: 718 SNEEENPEDSEGAENSSDTESAPSPSPVEAVKPS--GD 753
>UNIPROTKB|E1BSW5 [details] [associations]
symbol:NCOR1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0001102
"RNA polymerase II activating transcription factor binding"
evidence=IEA] [GO:0002361 "CD4-positive, CD25-positive, alpha-beta
regulatory T cell differentiation" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0014067 "negative
regulation of phosphatidylinositol 3-kinase cascade" evidence=IEA]
[GO:0016580 "Sin3 complex" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0021794
"thalamus development" evidence=IEA] [GO:0031065 "positive
regulation of histone deacetylation" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0035033
"histone deacetylase regulator activity" evidence=IEA] [GO:0040014
"regulation of multicellular organism growth" evidence=IEA]
[GO:0042632 "cholesterol homeostasis" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0046329 "negative
regulation of JNK cascade" evidence=IEA] [GO:0046965 "retinoid X
receptor binding" evidence=IEA] [GO:0046966 "thyroid hormone
receptor binding" evidence=IEA] [GO:0051225 "spindle assembly"
evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IEA] [GO:0072362 "regulation of glycolysis by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0072368 "regulation of lipid transport by
negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0005737 GO:GO:0017053
GO:GO:0003714 GO:GO:0051225 GO:GO:0043565 GO:GO:0040014
GO:GO:0003700 GO:GO:0003682 GO:GO:0042632 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0032922 GO:GO:0046329 GO:GO:0005876 GO:GO:0016580
GO:GO:0031065 GO:GO:0014067 GO:GO:0035033 OMA:PPMDRIT GO:GO:0072362
GO:GO:0072368 GeneTree:ENSGT00550000074554 EMBL:AADN02025813
IPI:IPI00588780 Ensembl:ENSGALT00000007130 Uniprot:E1BSW5
Length = 2480
Score = 203 (76.5 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 62/272 (22%), Positives = 123/272 (45%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
+ +I N++ A EA ++ + L P+ + + + ++++ + +KK +L
Sbjct: 238 IVQIIYDENRKKAEEAHKIFEGLGPK--VELPLYNQPSDTKVYHENIKTNQVMRKKLILF 295
Query: 591 FK---------ERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKH 641
FK E+ + ++ W + + + R + K + +K
Sbjct: 296 FKRRNHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQ 355
Query: 642 RSSIR--SRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILDK 693
R R LS + +E+I+ S+ ++ K R +P ++ D
Sbjct: 356 REQQERFQRVGQRGAGLSATIARSEHEISEIIDGLSE--QENNEKQMRQLSVIPPMMFDA 413
Query: 694 KEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYK 753
+++ +FI+ NGL+EDP V K+R +N WT E+EIF +K K+F IAS+L K
Sbjct: 414 EQRRV-KFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKEKFVQHPKNFGLIASYLERK 472
Query: 754 TTADCVEFYYKNHKSDCFEKLKKKHDFSKQGK 785
DCV +YY K++ ++ L +++ ++G+
Sbjct: 473 NVPDCVLYYYLTKKNENYKALVRRNYGKRRGR 504
Score = 105 (42.0 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 46/217 (21%), Positives = 88/217 (40%)
Query: 935 MDPSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLI---H 991
++ S WT+EE + + + +G++++ IA+ + T+S QCK F+ ++ LD + H
Sbjct: 628 VETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVGTKSEAQCKNFYFNYKRRHNLDSLLQQH 687
Query: 992 TGRGNVGPSVNDDANGGGSDTEDACVLETSSVNCSDKLGSKTDEELPSHVIHSNQEESCS 1051
+ + P D S E V T S + + + +EE P +
Sbjct: 688 KQKSSRRPREERDV----SQCES--VASTVSAQEDEDIEASNEEENPEDSEGAENSSDTE 741
Query: 1052 AGAKNLQTDLNKPEDDNGITPLNDKDSEAVKPVNNDAFRTESRSFELESNNMNGMDNQSE 1111
+ + KP ++ TP +S A K A ES + + ++ + +Q
Sbjct: 742 SAPSPTPAETAKPTEE---TP---SESAASKMTTEAAAEQES-TVKPAASTSPSLTSQGV 794
Query: 1112 SVLDQKNAVELFKTAVRDKVAEQGAV-SVSAGEESDP 1147
S + + + K + + E V S S E+ P
Sbjct: 795 STAESQTSEPQVKEEINTEAEEPMEVDSRSHPVEAKP 831
Score = 49 (22.3 bits), Expect = 7.0e-10, Sum P(3) = 7.0e-10
Identities = 24/122 (19%), Positives = 50/122 (40%)
Query: 1056 NLQTDLNKPEDDNGITPLNDKDSEAVKPVNNDAFRTESRSFELESNNMNGMDNQ-SESVL 1114
NL + L + + + P ++D + V + E E + N D++ +E+
Sbjct: 679 NLDSLLQQHKQKSSRRPREERDVSQCESVASTVSAQEDEDIEASNEEENPEDSEGAENSS 738
Query: 1115 DQKNA-----VELFKTAVR---DKVAEQGAVSVSAGEESDPCPSSSNAVEETNDVVAEAS 1166
D ++A E K + A + +A +ES P++S + T+ V+ A
Sbjct: 739 DTESAPSPTPAETAKPTEETPSESAASKMTTEAAAEQESTVKPAASTSPSLTSQGVSTAE 798
Query: 1167 TE 1168
++
Sbjct: 799 SQ 800
Score = 48 (22.0 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 18/65 (27%), Positives = 26/65 (40%)
Query: 1338 QSISKSDRNIDEPYLAQDCYLRKCNSSMPHSSVTELPFLAENIEQTSDRRRAHSCSFSDT 1397
Q +S + + P C R PH+ + E L+ +I Q RA S SF +
Sbjct: 1275 QGMSMRESPVSAPLEGLIC--RALPRGSPHAELKERTVLSGSIMQVKGTPRATSESFEEG 1332
Query: 1398 EKPSK 1402
K K
Sbjct: 1333 LKYPK 1337
Score = 46 (21.3 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 26/131 (19%), Positives = 55/131 (41%)
Query: 1294 RQHLSVHSIVNHVESPQILNGYPLPISTKKEMNGDINCRQLSEVQSIS-KSDRNIDEPYL 1352
R ++ +V Q N Y + K+ N D +Q + S + +R++ +
Sbjct: 650 RNWAAIAKMVGTKSEAQCKNFY---FNYKRRHNLDSLLQQHKQKSSRRPREERDVSQCES 706
Query: 1353 AQDCYLRKCNSSMPHSSVTELPFLAENIEQTSDRRRAHSCSFSDTEKPSKNGDVK-LFGK 1411
+ + + S+ E P +E E +SD A S + ++T KP++ + K
Sbjct: 707 VASTVSAQEDEDIEASNEEENPEDSEGAENSSDTESAPSPTPAETAKPTEETPSESAASK 766
Query: 1412 ILSHPSSSQKS 1422
+ + ++ Q+S
Sbjct: 767 MTTEAAAEQES 777
Score = 45 (20.9 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 1103 MNGMDNQSES---VLDQKNAVELFKTAVRDKVAEQGAVSVSAGEESDPCPSSSNAVEE 1157
M D++SE V+ Q AV A + A A + + EE++P P+S AV +
Sbjct: 2311 MGNFDDKSEDHGVVMSQSIAV-----APGNSSAVVSASNETRREEANPSPNSGGAVSK 2363
Score = 37 (18.1 bits), Expect = 1.9e-14, Sum P(3) = 1.9e-14
Identities = 6/16 (37%), Positives = 8/16 (50%)
Query: 1285 HKSVVSDDYRQHLSVH 1300
H+ + YR HL H
Sbjct: 1572 HRGATPEVYRSHLPPH 1587
>ZFIN|ZDB-GENE-040426-993 [details] [associations]
symbol:ncor1 "nuclear receptor co-repressor 1"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
ZFIN:ZDB-GENE-040426-993 GO:GO:0005634 GO:GO:0009952 GO:GO:0003677
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 OMA:PPMDRIT GeneTree:ENSGT00550000074554
EMBL:CR931763 EMBL:AL953908 IPI:IPI00489826
Ensembl:ENSDART00000097574 ArrayExpress:F1QWG8 Bgee:F1QWG8
Uniprot:F1QWG8
Length = 2409
Score = 199 (75.1 bits), Expect = 1.6e-15, Sum P(5) = 1.6e-15
Identities = 70/265 (26%), Positives = 123/265 (46%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
+ +I N++ A EA ++L+ L P+ + + + +D++ + +KK +L
Sbjct: 223 IVQIIYDENRKKAEEAHKILEGLGPK--VELPLYNQPSDTKVYHDNIKTNQVMRKKLILF 280
Query: 591 FKERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTG--YQKHRSSIRS- 647
FK R K + + R D + K R + + + T Y++ IR
Sbjct: 281 FKRRNHARKQREQKICQRYDELMTEWEKKVERMENNPRRKAKESRTREYYERQFPEIRKQ 340
Query: 648 -----RFS--SPAGN-LSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILDK 693
RF G LS + +E+I+ S+ ++ K R +P ++ D
Sbjct: 341 REQQERFQRVGQRGTGLSATIARSEHEISEIIDGLSE--QENNEKQMRQLSVIPPMMYDS 398
Query: 694 KEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYK 753
+++ +FI+ NGL++DP V K R +N WT E+EIF +K K+F IASFL K
Sbjct: 399 EQRRV-KFINMNGLMDDPMKVYKSRQFMNVWTEHEKEIFREKFVQHPKNFGLIASFLERK 457
Query: 754 TTADCVEFYYKNHKSDCFEKLKKKH 778
+DCV +YY KS ++ L +++
Sbjct: 458 CVSDCVLYYYLTKKSQNYKTLVRRN 482
Score = 128 (50.1 bits), Expect = 1.6e-15, Sum P(5) = 1.6e-15
Identities = 67/256 (26%), Positives = 110/256 (42%)
Query: 925 DTCSDESCGEMDPSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKC 984
DT GE S WT+EE I + + +G+++S IA+ + ++S QCK F+ ++
Sbjct: 629 DTRGAVEAGET--SRWTEEEMEIAKKGLVEHGRNWSAIAKMVGSKSEAQCKNFYFNNKRR 686
Query: 985 LGLDLI---HTG----RGNVGPSVNDDANGGGSDTEDACVLETSSVNCSDKLGSKTDEEL 1037
LD + H G RGN PS +D D E++ + SS S ++TD
Sbjct: 687 YNLDNLLRQHKGSRRLRGNRDPSQSDPVP---DDDEESDGPDNSSDTESAPSPTQTDPSK 743
Query: 1038 PSHVI-HSNQ------EESCSAGAKNLQTDLNKPEDDNGITPLNDKDSEAVKPVNNDAFR 1090
PS + H++ ++ +A AK D E G L K ++ + D
Sbjct: 744 PSESLTHTSSAVDGGSDQDVTA-AKGPVADAKGQESPYG--ELKVKIEKSPEGGAGDVLP 800
Query: 1091 TESRS---FELESN-NMNGMDNQSESVLDQKNAVELFKTA--VRDKVAEQGAVSVSAGEE 1144
+ R+ +E++ + D + S + V++ KT V+DK QG S +
Sbjct: 801 QDDRARSAYEMQIHPKSEPQDVEMTSPSTDRAQVQV-KTEPEVKDKEERQGEQQHSDNDS 859
Query: 1145 SDPCPSSSNAVEETND 1160
S C S+ VE D
Sbjct: 860 SATC-SADEDVEAEPD 874
Score = 46 (21.3 bits), Expect = 8.4e-09, Sum P(3) = 8.4e-09
Identities = 23/81 (28%), Positives = 32/81 (39%)
Query: 1381 EQTSDRRRAHSCSFSDTEKPSKNGDVKLFGKILSHPSSSQKSAFSSHD----NGENGHHH 1436
+ +SD A S + +D KPS++ L+H SS+ S D G
Sbjct: 725 DNSSDTESAPSPTQTDPSKPSES---------LTHTSSAVDGG-SDQDVTAAKGPVADAK 774
Query: 1437 KQSSKASNLKFTAHHPPDGGA 1457
Q S LK P+GGA
Sbjct: 775 GQESPYGELKVKIEKSPEGGA 795
Score = 46 (21.3 bits), Expect = 7.4e-08, Sum P(5) = 7.4e-08
Identities = 14/50 (28%), Positives = 21/50 (42%)
Query: 1070 ITPLNDKDSEAVKPVNNDAFRTESRSFELES--NNMNGMDNQSESVLDQK 1117
++P N D +P + S+E S +GMD Q SVL +
Sbjct: 2095 VSPENSSDKSRARPGRSPDRGRGLESYEPISPPQGYSGMDKQEASVLQSQ 2144
Score = 45 (20.9 bits), Expect = 4.0e-08, Sum P(4) = 4.0e-08
Identities = 28/118 (23%), Positives = 49/118 (41%)
Query: 1081 VKPVNNDAFRTESRSFELESNNMNGMDNQSESVLDQKNAVELFKTAVRD-KVAEQGAVSV 1139
+K V+ + R + ES+ + S +VLD++ + F D K+ EQ A+
Sbjct: 941 IKAVHESVQEDKQRLDQNESDRRTRVTTHSPTVLDREG--KPFAYMPYDLKLMEQEALG- 997
Query: 1140 SAGEESDPCPSSSNAVEETNDVVAEASTEGFGNGLERYQ-PMLLENSLNDVRDKICNV 1196
AG P S ++AS + G+ RY P +L+ + N + +V
Sbjct: 998 GAGRPGSPYRLSPREP-------SKASPQPDGSNSARYSVPPVLQPAPNQAVQTVSDV 1048
Score = 44 (20.5 bits), Expect = 1.6e-15, Sum P(5) = 1.6e-15
Identities = 11/44 (25%), Positives = 25/44 (56%)
Query: 902 RRQKADSVMRLPSTSDVTQNVDDDTCSDESCGEMDPSDWTDEEK 945
RR++ + R PS + T++ +++ S+++ + D +EEK
Sbjct: 486 RRRRNQQITR-PSQEEKTEDKNEEDKSEKTEKKEDEEKKEEEEK 528
Score = 43 (20.2 bits), Expect = 1.6e-15, Sum P(5) = 1.6e-15
Identities = 22/86 (25%), Positives = 35/86 (40%)
Query: 1354 QDCYLRKCNSSMPHSSVTELPFLAENIEQTSDRRRAHSCSFSDTEKPSKNGDVKLFGKIL 1413
Q + NSS SS++E A T+ +++ S + S K G G+
Sbjct: 2253 QQTLMSAANSSGSMSSISESRQEANPSPNTAGKQKLQSKASSRKSKSPNPGQAYSAGE-- 2310
Query: 1414 SHPSSSQKSAFSSHDNGENGHHHKQS 1439
PSS S H G+ +H+Q+
Sbjct: 2311 -RPSSVS----SVHSEGD---YHRQA 2328
Score = 42 (19.8 bits), Expect = 7.4e-08, Sum P(5) = 7.4e-08
Identities = 12/48 (25%), Positives = 21/48 (43%)
Query: 993 GRGNVGPSVNDDANGGGSDTEDACVLETSSVNCSDKLGSKTDEELPSH 1040
G+ + P + DD+N + T + + S + GS T + SH
Sbjct: 1459 GKAQLSPGMYDDSNARRTPTYSSTSIPRGSPLLRGQEGSITTGKPVSH 1506
Score = 41 (19.5 bits), Expect = 2.2e-07, Sum P(5) = 2.2e-07
Identities = 13/49 (26%), Positives = 18/49 (36%)
Query: 1131 VAEQGAVSVSAGEESDPCPSSSNAVEETNDVVAEASTEGFGNGLERYQP 1179
+ + A S S PSSS+++ T G L RY P
Sbjct: 2033 ITQDFAKSQDTPPSSTSLPSSSSSLSSTFQSSGVGGGVGRVKALNRYSP 2081
Score = 41 (19.5 bits), Expect = 3.1e-07, Sum P(4) = 3.1e-07
Identities = 14/72 (19%), Positives = 33/72 (45%)
Query: 1076 KDSEAVKPVNNDAFRTESRSFELESNNMNGMDNQSESVLDQKNAVELFKTAVRDKVAEQG 1135
++ + +P + +TE ++ E +S +++ + ++K+ E K +DK +G
Sbjct: 489 RNQQITRPSQEE--KTEDKNEEDKSEKTEKKEDEEKKEEEEKDEKEDSKDISKDKEKCEG 546
Query: 1136 AVSVSAGEESDP 1147
E+S P
Sbjct: 547 EEE-EGKEQSTP 557
Score = 39 (18.8 bits), Expect = 1.6e-15, Sum P(5) = 1.6e-15
Identities = 8/38 (21%), Positives = 19/38 (50%)
Query: 1143 EESDPCPSSSNAVEETNDVVAEASTEGFGNGLERYQPM 1180
+ D PSS++ ++ + + + G G G+ R + +
Sbjct: 2039 KSQDTPPSSTSLPSSSSSLSSTFQSSGVGGGVGRVKAL 2076
Score = 37 (18.1 bits), Expect = 2.5e-15, Sum P(5) = 2.5e-15
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 1171 GNGLERYQPM 1180
G GLE Y+P+
Sbjct: 2115 GRGLESYEPI 2124
>UNIPROTKB|J9NUC7 [details] [associations]
symbol:NCOR2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GeneTree:ENSGT00550000074554 EMBL:AAEX03014626
EMBL:AAEX03014627 EMBL:AAEX03014628 EMBL:AAEX03014629
EMBL:AAEX03014630 EMBL:AAEX03014631 Ensembl:ENSCAFT00000048752
Uniprot:J9NUC7
Length = 1409
Score = 203 (76.5 bits), Expect = 2.8e-15, Sum P(3) = 2.8e-15
Identities = 64/274 (23%), Positives = 128/274 (46%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
L +I N++ A A +L+ L P+ + + + ++++ + +KK +L
Sbjct: 226 LVQIIYDENRKKAEAAHRILEGLGPQ--VELPLYNQPSDTRQYHENIKINQAMRKKLILY 283
Query: 591 FK---------ERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKH 641
FK E+ ++ W + + + R + K + +K
Sbjct: 284 FKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQ 343
Query: 642 RS---SIRSRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILD 692
R ++SR LS+ + +E+I+ S+ ++ K R +P ++ D
Sbjct: 344 RELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSE--QENLEKQMRQLAVIPPMLYD 401
Query: 693 KKEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNY 752
++ +FI+ NGL++DP V K+R ++N W+ +E+E F +K K+F IASFL
Sbjct: 402 A-DQQRIKFINMNGLMDDPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLER 460
Query: 753 KTTADCVEFYYKNHKSDCFEKLKKKHDFSKQGKT 786
KT A+CV +YY K++ ++ L ++ + ++GK+
Sbjct: 461 KTVAECVLYYYLTKKNENYKSLVRR-SYRRRGKS 493
Score = 97 (39.2 bits), Expect = 2.8e-15, Sum P(3) = 2.8e-15
Identities = 40/191 (20%), Positives = 85/191 (44%)
Query: 903 RQKADSVMRLPSTSDVTQNVDDDTCSDESCGEMDPSD-WTDEEKSIFIQAVTSYGKDFSM 961
R+K + + ++ + + ++ + EM+ S WT+EE + + +G+++S
Sbjct: 577 RRKGRITRSMANEANSEEAITPQQSAELASMEMNESSRWTEEEMETAKKGLLEHGRNWSA 636
Query: 962 IARCIRTRSRDQCKVFFSKARKCLGLD-LIHTGRGNVGPSVN---DDANGGGSDTEDAC- 1016
IAR + +++ QCK F+ +K LD ++ + + N + +E+A
Sbjct: 637 IARMVGSKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAF 696
Query: 1017 --VLETSSVNCSDKLGSKTD--EELPSHVIHSNQEESCSAGAKNLQTDLNKPEDDNGITP 1072
V+E + S G++ + EE + V +S+ ES + +T+ K NG P
Sbjct: 697 PPVVEDEEMEASGASGNEEEMAEEAEATVNNSSDTESIPSP----RTEAAKDTGQNGPKP 752
Query: 1073 LNDKDSEAVKP 1083
++ + P
Sbjct: 753 PPGPGTDVLPP 763
Score = 45 (20.9 bits), Expect = 2.8e-15, Sum P(3) = 2.8e-15
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 1071 TPLNDKDSEAVKPVNNDAFRTESRSFELES 1100
+P+ D EA KPV AF E + E+
Sbjct: 1018 SPVPPADKEAEKPVFFPAFAPEGQKLPTEA 1047
Score = 44 (20.5 bits), Expect = 6.7e-10, Sum P(3) = 6.7e-10
Identities = 19/61 (31%), Positives = 25/61 (40%)
Query: 861 GGERETAAADVLAGICGSLSSEAMSSCITSSVDPAEGQRDWRRQKADSVMRLPSTSDVTQ 920
GG+ TA AG S++ ++C VD EG D R + L TSD
Sbjct: 898 GGKAPTAKG---AG--APQDSDSSATCSADEVDEPEGG-DKNRLLSPRPSLLTPTSDARA 951
Query: 921 N 921
N
Sbjct: 952 N 952
Score = 42 (19.8 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 11/48 (22%), Positives = 23/48 (47%)
Query: 1032 KTDEELPSHVIHSNQEESCSAGAKNLQTDLNKPEDDNGITPLNDKDSE 1079
K +E+ + ++ + +EE A+ + D+ K E+ +P SE
Sbjct: 810 KEEEDAAAPLV-AEEEEQKPPVAQEMAVDMGKTEEPGEASPAEPIKSE 856
>UNIPROTKB|F1RFN4 [details] [associations]
symbol:F1RFN4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
GeneTree:ENSGT00550000074554 Ensembl:ENSSSCT00000010702 OMA:DERIENN
ArrayExpress:F1RFN4 Uniprot:F1RFN4
Length = 1262
Score = 218 (81.8 bits), Expect = 3.6e-14, Sum P(3) = 3.6e-14
Identities = 61/215 (28%), Positives = 107/215 (49%)
Query: 584 KKKQLLRFKERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKHRS 643
+KK +L FK R K + R D R+ + + RA+ K E + +K R
Sbjct: 282 RKKLILYFKRRNHARKQWEQKFCQRYDERIENNPRRRAKESKVREY-YEKQFPEIRKQRE 340
Query: 644 SIRSRFSSPAGNLSLVQTAEVINFTSKLLS--DSQIKTYRNSLKMPALILDKKEKMSSRF 701
++ R S G + +LLS ++ K R +P ++ D ++ +F
Sbjct: 341 -LQERMQSRVGQRGSGLSMSAARSERELLSGWENLEKQMRQLAVIPPMLYDA-DQQRIKF 398
Query: 702 ISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEF 761
I+ NGL++DP V K+R ++N W+ +E+E F +K K+F IASFL KT A+CV +
Sbjct: 399 INMNGLMDDPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLY 458
Query: 762 YYKNHKSDCFEKLKKKHDFSKQGKTSTNTYLVTTG 796
YY K++ ++ L ++ + ++GK+ + +G
Sbjct: 459 YYLTKKNENYKSLVRR-SYRRRGKSQESLRQTQSG 492
Score = 76 (31.8 bits), Expect = 3.6e-14, Sum P(3) = 3.6e-14
Identities = 21/89 (23%), Positives = 43/89 (48%)
Query: 903 RQKADSVMRLPSTSDVTQNVDDDTCSDESCGEMDPSD-WTDEEKSIFIQAVTSYGKDFSM 961
R+K + + ++ + V ++ + EM+ S WT+EE + +G+++S
Sbjct: 567 RRKGRITRSMANEANSEETVTPQQSAELASMEMNESSRWTEEEMETAKMGLLEHGRNWSA 626
Query: 962 IARCIRTRSRDQCKVFFSKARKCLGLDLI 990
R + +++ QCK F+ +K LD I
Sbjct: 627 -TRMVGSKTVSQCKNFYFNYKKRQNLDEI 654
Score = 38 (18.4 bits), Expect = 3.6e-14, Sum P(3) = 3.6e-14
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 1058 QTDLNKPEDDNGITPLNDKDSEAVKPVNNDAFRTESR 1094
Q N P + +P+ + EA KPV AF E +
Sbjct: 985 QQPSNSPRGKSR-SPVPPAEKEAEKPVFFPAFVAEGQ 1020
>UNIPROTKB|C9JQE8 [details] [associations]
symbol:NCOR2 "Nuclear receptor corepressor 2" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 PDB:2L5G
PDBsum:2L5G HOGENOM:HOG000113746 EMBL:AC069261 EMBL:AC073916
HGNC:HGNC:7673 ChiTaRS:NCOR2 EMBL:AC073592 IPI:IPI01017993
ProteinModelPortal:C9JQE8 SMR:C9JQE8 STRING:C9JQE8 PRIDE:C9JQE8
Ensembl:ENST00000458234 ArrayExpress:C9JQE8 Bgee:C9JQE8
Uniprot:C9JQE8
Length = 1451
Score = 200 (75.5 bits), Expect = 8.5e-14, Sum P(3) = 8.5e-14
Identities = 64/274 (23%), Positives = 127/274 (46%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
L +I N++ A A +L+ L P+ + + + ++++ + +KK +L
Sbjct: 226 LVQIIYDENRKKAEAAHRILEGLGPQ--VELPLYNQPSDTRQYHENIKINQAMRKKLILY 283
Query: 591 FK---------ERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKH 641
FK E+ ++ W + + + R + K + +K
Sbjct: 284 FKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQ 343
Query: 642 RS---SIRSRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILD 692
R ++SR LS+ + +E+I+ S+ ++ K R +P ++ D
Sbjct: 344 RELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSE--QENLEKQMRQLAVIPPMLYD 401
Query: 693 KKEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNY 752
++ +FI+ NGL+ DP V K+R ++N W+ +E+E F +K K+F IASFL
Sbjct: 402 A-DQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLER 460
Query: 753 KTTADCVEFYYKNHKSDCFEKLKKKHDFSKQGKT 786
KT A+CV +YY K++ ++ L ++ + ++GK+
Sbjct: 461 KTVAECVLYYYLTKKNENYKSLVRR-SYRRRGKS 493
Score = 88 (36.0 bits), Expect = 8.5e-14, Sum P(3) = 8.5e-14
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 936 DPSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLI 990
+ S WT+EE + + +G+++S IAR + +++ QCK F+ +K LD I
Sbjct: 611 ESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNLDEI 665
Score = 43 (20.2 bits), Expect = 8.5e-14, Sum P(3) = 8.5e-14
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 1055 KNLQTDLNKPEDDNGI------TPLNDKDSEAVKPVNNDAFRTESR 1094
+NLQ + + P+ +P D EA KPV AF E++
Sbjct: 1003 QNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAEAQ 1048
Score = 43 (20.2 bits), Expect = 3.1e-09, Sum P(3) = 3.1e-09
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 861 GGERETAAADVLAGICGSLSSEAMSSCITSSVD-PAEGQ 898
G E++ AA+ LA G S C + + PA+G+
Sbjct: 840 GEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGK 878
Score = 41 (19.5 bits), Expect = 4.9e-09, Sum P(3) = 4.9e-09
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 881 SEAMSSCITSSVDPAEGQRDWRRQKADSVMRLPSTSDVTQN 921
S++ ++C VD AEG D R + L T D N
Sbjct: 915 SDSSATCSADEVDEAEGG-DKNRLLSPRPSLLTPTGDPRAN 954
Score = 40 (19.1 bits), Expect = 1.7e-13, Sum P(3) = 1.7e-13
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 1502 KYPAAFGGYPASSSKMEQQSLQAAVVKSNERHL 1534
K PAA A +E + ++A+ V NE +
Sbjct: 685 KAPAAASEEAAFPPVVEDEEMEASGVSGNEEEM 717
Score = 40 (19.1 bits), Expect = 1.7e-13, Sum P(3) = 1.7e-13
Identities = 17/71 (23%), Positives = 29/71 (40%)
Query: 1032 KTDEELPSHVIHSNQEESCSAGAKNLQTDLNKPEDD--NGIT------PLNDKDSEAVKP 1083
K +E + + +E+ A A+ L D K E+ + T P KD+EA +
Sbjct: 827 KEEETAAAPPVEEGEEQKPPA-AEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEAAEA 885
Query: 1084 VNNDAFRTESR 1094
A + E +
Sbjct: 886 TAEGALKAEKK 896
Score = 37 (18.1 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 11/46 (23%), Positives = 20/46 (43%)
Query: 1143 EESDPCPSSSNAVEETNDVVAEASTEGFGNGLERYQPMLLENSLND 1188
++ P P SS ++ + EA E +E + LL+ +D
Sbjct: 507 QQQQPMPRSSQEEKDEKEKEKEAEKEEEKPEVENDKEDLLKEKTDD 552
>RGD|1310293 [details] [associations]
symbol:Ncor2 "nuclear receptor co-repressor 2" species:10116
"Rattus norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000785
"chromatin" evidence=IDA] [GO:0001012 "RNA polymerase II regulatory
region DNA binding" evidence=IDA] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003007 "heart morphogenesis"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003682 "chromatin binding" evidence=ISO;IDA] [GO:0003714
"transcription corepressor activity" evidence=IEA;ISO] [GO:0005112
"Notch binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0007595
"lactation" evidence=IEP] [GO:0010243 "response to organic
nitrogen" evidence=IEP] [GO:0016604 "nuclear body"
evidence=IEA;ISO] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=IPI] [GO:0017053 "transcriptional repressor
complex" evidence=ISO] [GO:0021537 "telencephalon development"
evidence=IEA;ISO] [GO:0021846 "cell proliferation in forebrain"
evidence=IEA;ISO] [GO:0030900 "forebrain development" evidence=ISO]
[GO:0032355 "response to estradiol stimulus" evidence=IEP]
[GO:0032403 "protein complex binding" evidence=IPI] [GO:0035259
"glucocorticoid receptor binding" evidence=IPI] [GO:0042593
"glucose homeostasis" evidence=IEA;ISO] [GO:0042698 "ovulation
cycle" evidence=IEP] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0042974 "retinoic acid receptor binding"
evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0045599 "negative regulation of fat cell
differentiation" evidence=IEA;ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0046965
"retinoid X receptor binding" evidence=IPI] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0050872 "white fat cell
differentiation" evidence=IEA;ISO] [GO:0060206 "estrous cycle
phase" evidence=IEP] [GO:0072365 "regulation of cellular ketone
metabolic process by negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 RGD:1310293 GO:GO:0005634 GO:GO:0032355 GO:GO:0000785
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:CH473973
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0001012 GO:GO:0060206
GO:GO:0010243 GO:GO:0007595 CTD:9612 KO:K06065
GeneTree:ENSGT00550000074554 IPI:IPI00391441 RefSeq:NP_001101804.1
UniGene:Rn.113362 Ensembl:ENSRNOT00000001334 GeneID:360801
KEGG:rno:360801 UCSC:RGD:1310293 NextBio:674146 Uniprot:D3ZXN9
Length = 2472
Score = 200 (75.5 bits), Expect = 1.0e-13, Sum P(3) = 1.0e-13
Identities = 65/274 (23%), Positives = 126/274 (45%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
L +I N++ A A +L+ L P+ + + + ++++ + +KK +L
Sbjct: 226 LVQIIYDENRKKAEAAHRILEGLGPQ--VELPLYNQPSDTRQYHENIKINQAMRKKLILY 283
Query: 591 FKERVLTLK---------FKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKH 641
FK R K + W + + + R + K + +K
Sbjct: 284 FKRRNHARKQWEQRFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQ 343
Query: 642 RS---SIRSRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILD 692
R ++SR LS+ + +E+I+ S+ ++ K R +P ++ D
Sbjct: 344 RELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSE--QENLEKQMRQLAVIPPMLYD 401
Query: 693 KKEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNY 752
++ +FI+ NGL++DP V K+R + N W+ +ER+ F +K K+F IASFL
Sbjct: 402 A-DQQRIKFINMNGLMDDPMKVYKDRQVTNMWSEQERDTFREKFMQHPKNFGLIASFLER 460
Query: 753 KTTADCVEFYYKNHKSDCFEKLKKKHDFSKQGKT 786
KT A+CV +YY K++ ++ L ++ + ++GK+
Sbjct: 461 KTVAECVLYYYLTKKNENYKSLVRR-SYRRRGKS 493
Score = 95 (38.5 bits), Expect = 1.0e-13, Sum P(3) = 1.0e-13
Identities = 41/190 (21%), Positives = 82/190 (43%)
Query: 903 RQKADSVMRLPSTSDVTQNVDDDTCSDESCGEMDPSD-WTDEEKSIFIQAVTSYGKDFSM 961
R+K + + ++ + S+ + EM+ S WT+EE + + +G+++S
Sbjct: 573 RRKGRITRSMANEANHEETATPQQSSELASMEMNESSRWTEEEMETAKKGLLEHGRNWSA 632
Query: 962 IARCIRTRSRDQCKVFFSKARKCLGLDLIHTGRGNVGPSVNDDANGGGSDTEDACVLETS 1021
IAR + +++ QCK F+ +K LD I + + +A T A ET+
Sbjct: 633 IARMVGSKTVSQCKNFYFNYKKRQNLDEI-LQQHKLKMEKERNARRKKKKTPAAASEETA 691
Query: 1022 SVNCSDKLGSKTDEELPSHVIHSNQEESCSAGAKNLQTDLNKPE--DDNGITPLNDK-DS 1078
++ DEE+ + +N+EE + + P + +G +N+ D+
Sbjct: 692 FPPAAE------DEEMEASGASANEEELAEEAEASQASGNEVPRVGECSGPAAVNNSSDT 745
Query: 1079 EAVKPVNNDA 1088
E+V +A
Sbjct: 746 ESVPSPRTEA 755
Score = 43 (20.2 bits), Expect = 1.0e-13, Sum P(3) = 1.0e-13
Identities = 9/40 (22%), Positives = 19/40 (47%)
Query: 1504 PAAFGGYPASSSKMEQQSLQAAVVKSNERHLNGVAVVPPR 1543
P GYP +++ +Q++ + S + H N + + R
Sbjct: 1639 PYLIRGYPDTAALENRQTIINDYITSQQMHHNAASAMAQR 1678
Score = 42 (19.8 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 1295 QHLSVHSIVNHVESPQILNGYP 1316
+HL+ H+ P ++ GYP
Sbjct: 1625 RHLAPSPTYPHLYPPYLIRGYP 1646
Score = 38 (18.4 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 1502 KYPAAFGGYPASSSKMEQQSLQAAVVKSNERHL 1534
K PAA A E + ++A+ +NE L
Sbjct: 681 KTPAAASEETAFPPAAEDEEMEASGASANEEEL 713
>UNIPROTKB|C9J239 [details] [associations]
symbol:NCOR2 "Nuclear receptor corepressor 2" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 EMBL:AC069261
EMBL:AC073916 IPI:IPI00923531 HGNC:HGNC:7673 ChiTaRS:NCOR2
EMBL:AC073592 ProteinModelPortal:C9J239 SMR:C9J239 STRING:C9J239
PRIDE:C9J239 Ensembl:ENST00000397355 UCSC:uc021rgb.1
ArrayExpress:C9J239 Bgee:C9J239 Uniprot:C9J239
Length = 2459
Score = 200 (75.5 bits), Expect = 4.0e-13, Sum P(3) = 4.0e-13
Identities = 64/274 (23%), Positives = 127/274 (46%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
L +I N++ A A +L+ L P+ + + + ++++ + +KK +L
Sbjct: 226 LVQIIYDENRKKAEAAHRILEGLGPQ--VELPLYNQPSDTRQYHENIKINQAMRKKLILY 283
Query: 591 FK---------ERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKH 641
FK E+ ++ W + + + R + K + +K
Sbjct: 284 FKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQ 343
Query: 642 RS---SIRSRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILD 692
R ++SR LS+ + +E+I+ S+ ++ K R +P ++ D
Sbjct: 344 RELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSE--QENLEKQMRQLAVIPPMLYD 401
Query: 693 KKEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNY 752
++ +FI+ NGL+ DP V K+R ++N W+ +E+E F +K K+F IASFL
Sbjct: 402 A-DQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLER 460
Query: 753 KTTADCVEFYYKNHKSDCFEKLKKKHDFSKQGKT 786
KT A+CV +YY K++ ++ L ++ + ++GK+
Sbjct: 461 KTVAECVLYYYLTKKNENYKSLVRR-SYRRRGKS 493
Score = 90 (36.7 bits), Expect = 4.0e-13, Sum P(3) = 4.0e-13
Identities = 35/146 (23%), Positives = 66/146 (45%)
Query: 936 DPSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLD-LIHTGR 994
+ S WT+EE + + +G+++S IAR + +++ QCK F+ +K LD ++ +
Sbjct: 611 ESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNLDEILQQHK 670
Query: 995 GNVGPSVN---DDANGGGSDTEDAC---VLETSSVNCSDKLGSKTD--EELPSHVIHSNQ 1046
+ N + +E+A V+E + S G++ + EE + V +S+
Sbjct: 671 LKMEKERNARRKKKKAPAAASEEAAFPPVVEDEEMEASGVSGNEEEMVEEAEATVNNSSD 730
Query: 1047 EESCSAGAKNLQTDLNKPEDDNGITP 1072
ES + T+ K NG P
Sbjct: 731 TESIPSP----HTEAAKDTGQNGPKP 752
Score = 44 (20.5 bits), Expect = 5.0e-12, Sum P(4) = 5.0e-12
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 1295 QHLSVHSIVNHVESPQILNGYP 1316
+HL+ + H+ P ++ GYP
Sbjct: 1644 RHLAPNPTYPHLYPPYLIRGYP 1665
Score = 43 (20.2 bits), Expect = 3.8e-07, Sum P(5) = 3.8e-07
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 861 GGERETAAADVLAGICGSLSSEAMSSCITSSVD-PAEGQ 898
G E++ AA+ LA G S C + + PA+G+
Sbjct: 823 GEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGK 861
Score = 43 (20.2 bits), Expect = 3.8e-07, Sum P(5) = 3.8e-07
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 1055 KNLQTDLNKPEDDNGI------TPLNDKDSEAVKPVNNDAFRTESR 1094
+NLQ + + P+ +P D EA KPV AF E++
Sbjct: 986 QNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAEAQ 1031
Score = 42 (19.8 bits), Expect = 4.0e-13, Sum P(3) = 4.0e-13
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 1504 PAAFGGYPASSSKMEQQSLQAAVVKSNERHLNGVAVVPPR 1543
P GYP +++ +Q++ + S + H N + R
Sbjct: 1658 PYLIRGYPDTAALENRQTIINDYITSQQMHHNAATAMAQR 1697
Score = 41 (19.5 bits), Expect = 5.9e-07, Sum P(5) = 5.9e-07
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 881 SEAMSSCITSSVDPAEGQRDWRRQKADSVMRLPSTSDVTQN 921
S++ ++C VD AEG D R + L T D N
Sbjct: 898 SDSSATCSADEVDEAEGG-DKNRLLSPRPSLLTPTGDPRAN 937
Score = 40 (19.1 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 1502 KYPAAFGGYPASSSKMEQQSLQAAVVKSNERHL 1534
K PAA A +E + ++A+ V NE +
Sbjct: 685 KAPAAASEEAAFPPVVEDEEMEASGVSGNEEEM 717
Score = 40 (19.1 bits), Expect = 4.1e-07, Sum P(4) = 4.1e-07
Identities = 17/71 (23%), Positives = 29/71 (40%)
Query: 1032 KTDEELPSHVIHSNQEESCSAGAKNLQTDLNKPEDD--NGIT------PLNDKDSEAVKP 1083
K +E + + +E+ A A+ L D K E+ + T P KD+EA +
Sbjct: 810 KEEETAAAPPVEEGEEQKPPA-AEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEAAEA 868
Query: 1084 VNNDAFRTESR 1094
A + E +
Sbjct: 869 TAEGALKAEKK 879
Score = 37 (18.1 bits), Expect = 5.0e-12, Sum P(4) = 5.0e-12
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 1500 LAKYPAAFGGYPASS 1514
LAK PA G PASS
Sbjct: 1948 LAKPPARSGLEPASS 1962
Score = 37 (18.1 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 11/46 (23%), Positives = 20/46 (43%)
Query: 1143 EESDPCPSSSNAVEETNDVVAEASTEGFGNGLERYQPMLLENSLND 1188
++ P P SS ++ + EA E +E + LL+ +D
Sbjct: 507 QQQQPMPRSSQEEKDEKEKEKEAEKEEEKPEVENDKEDLLKEKTDD 552
>UNIPROTKB|F1PQQ7 [details] [associations]
symbol:NCOR2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GeneTree:ENSGT00550000074554 EMBL:AAEX03014626
EMBL:AAEX03014627 EMBL:AAEX03014628 EMBL:AAEX03014629
EMBL:AAEX03014630 EMBL:AAEX03014631 Ensembl:ENSCAFT00000011198
OMA:MHHNAAT Uniprot:F1PQQ7
Length = 2509
Score = 203 (76.5 bits), Expect = 4.3e-13, Sum P(4) = 4.3e-13
Identities = 64/274 (23%), Positives = 128/274 (46%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
L +I N++ A A +L+ L P+ + + + ++++ + +KK +L
Sbjct: 226 LVQIIYDENRKKAEAAHRILEGLGPQ--VELPLYNQPSDTRQYHENIKINQAMRKKLILY 283
Query: 591 FK---------ERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKH 641
FK E+ ++ W + + + R + K + +K
Sbjct: 284 FKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQ 343
Query: 642 RS---SIRSRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILD 692
R ++SR LS+ + +E+I+ S+ ++ K R +P ++ D
Sbjct: 344 RELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSE--QENLEKQMRQLAVIPPMLYD 401
Query: 693 KKEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNY 752
++ +FI+ NGL++DP V K+R ++N W+ +E+E F +K K+F IASFL
Sbjct: 402 A-DQQRIKFINMNGLMDDPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLER 460
Query: 753 KTTADCVEFYYKNHKSDCFEKLKKKHDFSKQGKT 786
KT A+CV +YY K++ ++ L ++ + ++GK+
Sbjct: 461 KTVAECVLYYYLTKKNENYKSLVRR-SYRRRGKS 493
Score = 90 (36.7 bits), Expect = 4.3e-13, Sum P(4) = 4.3e-13
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 934 EMDPSD-WTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLI 990
EM+ S WT+EE + + +G+++S IAR + +++ QCK F+ +K LD I
Sbjct: 608 EMNESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNLDEI 665
Score = 45 (20.9 bits), Expect = 4.3e-13, Sum P(4) = 4.3e-13
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 1071 TPLNDKDSEAVKPVNNDAFRTESRSFELES 1100
+P+ D EA KPV AF E + E+
Sbjct: 1039 SPVPPADKEAEKPVFFPAFAPEGQKLPTEA 1068
Score = 44 (20.5 bits), Expect = 4.3e-13, Sum P(4) = 4.3e-13
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 1295 QHLSVHSIVNHVESPQILNGYP 1316
+HL+ + H+ P ++ GYP
Sbjct: 1641 RHLAPNPTYPHLYPPYLIRGYP 1662
Score = 44 (20.5 bits), Expect = 1.5e-08, Sum P(4) = 1.5e-08
Identities = 19/61 (31%), Positives = 25/61 (40%)
Query: 861 GGERETAAADVLAGICGSLSSEAMSSCITSSVDPAEGQRDWRRQKADSVMRLPSTSDVTQ 920
GG+ TA AG S++ ++C VD EG D R + L TSD
Sbjct: 920 GGKAPTAKG---AG--APQDSDSSATCSADEVDEPEGG-DKNRLLSPRPSLLTPTSDARA 973
Query: 921 N 921
N
Sbjct: 974 N 974
Score = 42 (19.8 bits), Expect = 6.7e-13, Sum P(4) = 6.7e-13
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 1504 PAAFGGYPASSSKMEQQSLQAAVVKSNERHLNGVAVVPPR 1543
P GYP +++ +Q++ + S + H N + R
Sbjct: 1655 PYLIRGYPDTAALENRQTIINDYITSQQMHHNAATAMAQR 1694
Score = 42 (19.8 bits), Expect = 8.5e-13, Sum P(4) = 8.5e-13
Identities = 11/48 (22%), Positives = 23/48 (47%)
Query: 1032 KTDEELPSHVIHSNQEESCSAGAKNLQTDLNKPEDDNGITPLNDKDSE 1079
K +E+ + ++ + +EE A+ + D+ K E+ +P SE
Sbjct: 832 KEEEDAAAPLV-AEEEEQKPPVAQEMAVDMGKTEEPGEASPAEPIKSE 878
Score = 39 (18.8 bits), Expect = 1.3e-12, Sum P(4) = 1.3e-12
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 1140 SAGEESDPCPSSSNAVEETNDVVAEAST-EG 1169
S G + P PS ++A+ + D + S EG
Sbjct: 2192 SEGGKRSPEPSKTSALGSSEDAIEPVSPPEG 2222
Score = 37 (18.1 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 1284 GHKSVVSDDYRQHLSVHSIVNHVESPQILNGYPLPISTKKEMN 1326
G K+ S R+ S+ N S + + + T EMN
Sbjct: 568 GRKTANSQGRRKGRITRSMANEANSEEAITPQRITGITSMEMN 610
>DICTYBASE|DDB_G0270560 [details] [associations]
symbol:mybP "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 dictyBase:DDB_G0270560 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003677
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 eggNOG:NOG12793 RefSeq:XP_646082.1
ProteinModelPortal:Q55DP9 EnsemblProtists:DDB0233335 GeneID:8617032
KEGG:ddi:DDB_G0270560 OMA:IYEENRD Uniprot:Q55DP9
Length = 1448
Score = 175 (66.7 bits), Expect = 8.4e-13, Sum P(5) = 8.4e-13
Identities = 43/126 (34%), Positives = 68/126 (53%)
Query: 695 EKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYKT 754
E+ + +I+ NG + DP A EK+R + WT +E++ FV K + K F KIASF + +T
Sbjct: 1051 EERNIHYINHNGFIVDPIAQEKQRKSLIIWTEDEKQKFVKKYLQYPKKFSKIASFFDNRT 1110
Query: 755 TADCVEFYYKNHKSDCFEKLKKKHDFSKQGKTSTN----TYLVTTGKRNRKMNAASLDIL 810
T D + FYY N K+ ++L + K+G+ S Y+VT + + L+ +
Sbjct: 1111 TEDMIVFYYNNKKTLNLKQLLFEAQSKKRGRKSNVFDPLNYIVT--------DKSGLNFM 1162
Query: 811 GEASEI 816
GE S I
Sbjct: 1163 GEPSSI 1168
Score = 90 (36.7 bits), Expect = 8.4e-13, Sum P(5) = 8.4e-13
Identities = 19/79 (24%), Positives = 42/79 (53%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLIHTGRGNVG- 998
WT+ E+ +F AV +G F++IA +++++ QC+ F+ +++ LD + +
Sbjct: 1365 WTEHERELFNIAVQKHGTQFNLIADYVQSKTGAQCRSFYYNSKRKSRLDSSTSSSSSSSS 1424
Query: 999 ---PSVNDDANGGGSDTED 1014
P++N ++ S +D
Sbjct: 1425 LHHPTINSSSSSSFSKEKD 1443
Score = 72 (30.4 bits), Expect = 8.4e-13, Sum P(5) = 8.4e-13
Identities = 27/119 (22%), Positives = 55/119 (46%)
Query: 163 SGDAATYATSGVLFEETTSRKKPRLGWGEGLAKYEKKKVEVPDVSGNKDGVFNFSSNAEP 222
+ + T T+ T S+ K + GWG GLA EKK P+++ + + ++A+
Sbjct: 433 NNNKTTTTTNNEEIIATPSKPKLQFGWGRGLASVEKK----PEITNSTNET---DTDAKV 485
Query: 223 LQSLSSNLAEKSPRVMGFSDCASPATP----SSVACSSSPGVEEKAFGKAVSVDNDVSN 277
+ S + +SP + + +P++ SS S +P + F + + +N+ +N
Sbjct: 486 IMSSLTGGDSQSPSISTSTISLAPSSTQQETSSPLSSDTPLITNVPFNQNNNNNNNNNN 544
Score = 47 (21.6 bits), Expect = 2.2e-08, Sum P(6) = 2.2e-08
Identities = 14/60 (23%), Positives = 24/60 (40%)
Query: 1043 HSNQEESCSAGAKNLQTDLNKPEDDNGITPLNDKDSEAVKPVNNDAFRTESRSFELESNN 1102
++N + + N N +++N T S + NND T S F L ++N
Sbjct: 1232 NTNNNNNNNNNNNNNNNTTNNNDNNNNTTTTITSSSAPILGENNDLEITSSSPFLLATSN 1291
Score = 45 (20.9 bits), Expect = 1.9e-08, Sum P(5) = 1.9e-08
Identities = 22/110 (20%), Positives = 42/110 (38%)
Query: 1044 SNQEESCSAGAKNLQTDLNKPEDDNGITPLNDKDSEAVKPVNNDAFRTESRSFELESNNM 1103
+N + + + N + N ++N T ND ++ + T S + L NN
Sbjct: 1223 NNYDSNSTNNTNNNNNNNNNNNNNNNTTNNNDNNNNTTTTI------TSSSAPILGENND 1276
Query: 1104 NGMDNQSESVLDQKNAVELF-KTAVRDKVAEQGAVSVSAGEESDPCPSSS 1152
+ + S +L N+V + R++ S+ +S SSS
Sbjct: 1277 LEITSSSPFLLATSNSVPTTPRLTTREQTIMATTASIHLSPKSPQLSSSS 1326
Score = 40 (19.1 bits), Expect = 8.4e-13, Sum P(5) = 8.4e-13
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 348 LEM--TETEIDSLENELKSLKSVL 369
+EM TE++I S+ N L ++ +L
Sbjct: 712 IEMSNTESDITSINNSLTKMEQLL 735
Score = 39 (18.8 bits), Expect = 2.2e-08, Sum P(6) = 2.2e-08
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 1095 SFELESNNMNGMDNQSESVLDQKNAVELFKTAVR 1128
S + N D +SE++ ++ ELF AV+
Sbjct: 1345 SLYIGDKEYNNKDKESENLRWTEHERELFNIAVQ 1378
Score = 38 (18.4 bits), Expect = 8.9e-08, Sum P(5) = 8.9e-08
Identities = 33/173 (19%), Positives = 71/173 (41%)
Query: 1363 SSMPHSSVTELPFLAENIEQTSDRRRAHSCSFSDTEKPSKNGDVKLFGKILSHPSSSQKS 1422
+S+ +S T P LA +T +R + T S+N + + +S+ +
Sbjct: 1182 TSLGSNSTTNSPVLAP---KTGAKRGPKAKVVISTANLSRNNNQNNYDS-----NSTNNT 1233
Query: 1423 AFSSHDNGENGHHHKQSSKASNLKFTAHHPPDGGAALLKFDRNNYVGLENGP---ARSYG 1479
++++N N +++ ++ N T A +L + N+ + P A S
Sbjct: 1234 NNNNNNNNNNNNNNNTTNNNDNNNNTTTTITSSSAPILG-ENNDLEITSSSPFLLATSNS 1292
Query: 1480 FWDGSKIQTGFSSL--PDSAILLA-KYPAAFGGYPASSSKMEQQSLQAAVVKS 1529
++ T ++ ++I L+ K P P+SSS+ +Q + ++ S
Sbjct: 1293 VPTTPRLTTREQTIMATTASIHLSPKSPQLSSSSPSSSSQQQQPPPSSPLIGS 1345
Score = 37 (18.1 bits), Expect = 8.4e-13, Sum P(5) = 8.4e-13
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 378 TSISLSVEDNANPFNKQGTVSNSIIR 403
TS + S N ++GT+++ + R
Sbjct: 988 TSSTSSTSSARNVLTRRGTITSDVAR 1013
>UNIPROTKB|E7EW50 [details] [associations]
symbol:NCOR1 "Nuclear receptor corepressor 1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 HGNC:HGNC:7672
ChiTaRS:NCOR1 EMBL:AC002553 EMBL:AC005971 IPI:IPI00793653
SMR:E7EW50 Ensembl:ENST00000411510 UCSC:uc010cpa.2 Uniprot:E7EW50
Length = 545
Score = 207 (77.9 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 63/272 (23%), Positives = 124/272 (45%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
+ +I N++ A EA ++ + L P+ + + + ++++ + +KK +L
Sbjct: 235 IVQIIYDENRKKAEEAHKIFEGLGPK--VELPLYNQPSDTKVYHENIKTNQVMRKKLILF 292
Query: 591 FK---------ERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKH 641
FK E+ + ++ W + + + R + K + +K
Sbjct: 293 FKRRNHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQ 352
Query: 642 RSSIR--SRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILDK 693
R R LS + +E+I+ S+ ++ K R +P ++ D
Sbjct: 353 REQQERFQRVGQRGAGLSATIARSEHEISEIIDGLSE--QENNEKQMRQLSVIPPMMFDA 410
Query: 694 KEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYK 753
+++ +FI+ NGL+EDP V K+R +N WT E+EIF DK K+F IAS+L K
Sbjct: 411 EQRRV-KFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDKFIQHPKNFGLIASYLERK 469
Query: 754 TTADCVEFYYKNHKSDCFEKLKKKHDFSKQGK 785
+ DCV +YY K++ ++ L +++ ++G+
Sbjct: 470 SVPDCVLYYYLTKKNENYKALVRRNYGKRRGR 501
>UNIPROTKB|E7EVU5 [details] [associations]
symbol:NCOR1 "Nuclear receptor corepressor 1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 HGNC:HGNC:7672
ChiTaRS:NCOR1 EMBL:AC002553 EMBL:AC005971 IPI:IPI00790393
ProteinModelPortal:E7EVU5 SMR:E7EVU5 PRIDE:E7EVU5
Ensembl:ENST00000436828 ArrayExpress:E7EVU5 Bgee:E7EVU5
Uniprot:E7EVU5
Length = 537
Score = 206 (77.6 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 59/239 (24%), Positives = 110/239 (46%)
Query: 558 HSNIDISGVANVFCCQNDSLVKEK---FAKKKQLLRFKERVLTLKFKAFQHLWREDLRLL 614
H NI +GV +N + K+ F ++ + +E+ + ++ W + + +
Sbjct: 276 HENIK-TGVPARRMMKNQVMRKKLILFFKRRNHARKQREQKICQRYDQLMEAWEKKVDRI 334
Query: 615 SIRKYRARSQKKCELSLRTTYTGYQKHRSSIR--SRFSSPAGNLSLV------QTAEVIN 666
R + K + +K R R LS + +E+I+
Sbjct: 335 ENNPRRKAKESKTREYYEKQFPEIRKQREQQERFQRVGQRGAGLSATIARSEHEISEIID 394
Query: 667 FTSKLLSDSQIKTYRNSLKMPALILDKKEKMSSRFISSNGLVEDPCAVEKERAMINPWTS 726
S+ ++ K R +P ++ D +++ +FI+ NGL+EDP V K+R +N WT
Sbjct: 395 GLSE--QENNEKQMRQLSVIPPMMFDAEQRRV-KFINMNGLMEDPMKVYKDRQFMNVWTD 451
Query: 727 EEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDCFEKLKKKHDFSKQGK 785
E+EIF DK K+F IAS+L K+ DCV +YY K++ ++ L +++ ++G+
Sbjct: 452 HEKEIFKDKFIQHPKNFGLIASYLERKSVPDCVLYYYLTKKNENYKALVRRNYGKRRGR 510
>UNIPROTKB|C9JFD3 [details] [associations]
symbol:NCOR2 "Nuclear receptor corepressor 2" species:9606
"Homo sapiens" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0001012 "RNA polymerase II regulatory
region DNA binding" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003007 "heart morphogenesis"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0007595 "lactation" evidence=IEA] [GO:0010243 "response to
organic nitrogen" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=IEA] [GO:0021537 "telencephalon development"
evidence=IEA] [GO:0021846 "cell proliferation in forebrain"
evidence=IEA] [GO:0032355 "response to estradiol stimulus"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0035259 "glucocorticoid receptor binding" evidence=IEA]
[GO:0042593 "glucose homeostasis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045599 "negative
regulation of fat cell differentiation" evidence=IEA] [GO:0046965
"retinoid X receptor binding" evidence=IEA] [GO:0050872 "white fat
cell differentiation" evidence=IEA] [GO:0060206 "estrous cycle
phase" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 GO:GO:0005634
GO:GO:0003714 GO:GO:0003007 GO:GO:0043565 GO:GO:0001701
GO:GO:0050872 GO:GO:0003682 GO:GO:0042593 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0045599 GO:GO:0016604 GO:GO:0021846 GO:GO:0021537
GO:GO:0000118 EMBL:AC069261 EMBL:AC073916 RefSeq:NP_006303.4
UniGene:Hs.137510 GeneID:9612 KEGG:hsa:9612 CTD:9612 HGNC:HGNC:7673
KO:K06065 ChiTaRS:NCOR2 GenomeRNAi:9612 NextBio:36061 EMBL:AC073592
IPI:IPI00952937 ProteinModelPortal:C9JFD3 SMR:C9JFD3 PRIDE:C9JFD3
Ensembl:ENST00000405201 UCSC:uc010tbb.2 ArrayExpress:C9JFD3
Bgee:C9JFD3 Uniprot:C9JFD3
Length = 2514
Score = 200 (75.5 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 64/274 (23%), Positives = 127/274 (46%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
L +I N++ A A +L+ L P+ + + + ++++ + +KK +L
Sbjct: 226 LVQIIYDENRKKAEAAHRILEGLGPQ--VELPLYNQPSDTRQYHENIKINQAMRKKLILY 283
Query: 591 FK---------ERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKH 641
FK E+ ++ W + + + R + K + +K
Sbjct: 284 FKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQ 343
Query: 642 RS---SIRSRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILD 692
R ++SR LS+ + +E+I+ S+ ++ K R +P ++ D
Sbjct: 344 RELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSE--QENLEKQMRQLAVIPPMLYD 401
Query: 693 KKEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNY 752
++ +FI+ NGL+ DP V K+R ++N W+ +E+E F +K K+F IASFL
Sbjct: 402 A-DQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLER 460
Query: 753 KTTADCVEFYYKNHKSDCFEKLKKKHDFSKQGKT 786
KT A+CV +YY K++ ++ L ++ + ++GK+
Sbjct: 461 KTVAECVLYYYLTKKNENYKSLVRR-SYRRRGKS 493
Score = 88 (36.0 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 936 DPSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLI 990
+ S WT+EE + + +G+++S IAR + +++ QCK F+ +K LD I
Sbjct: 611 ESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNLDEI 665
Score = 44 (20.5 bits), Expect = 3.9e-11, Sum P(5) = 3.9e-11
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 1295 QHLSVHSIVNHVESPQILNGYP 1316
+HL+ + H+ P ++ GYP
Sbjct: 1653 RHLAPNPTYPHLYPPYLIRGYP 1674
Score = 43 (20.2 bits), Expect = 2.3e-07, Sum P(4) = 2.3e-07
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 861 GGERETAAADVLAGICGSLSSEAMSSCITSSVD-PAEGQ 898
G E++ AA+ LA G S C + + PA+G+
Sbjct: 840 GEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGK 878
Score = 42 (19.8 bits), Expect = 6.8e-12, Sum P(4) = 6.8e-12
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 1504 PAAFGGYPASSSKMEQQSLQAAVVKSNERHLNGVAVVPPR 1543
P GYP +++ +Q++ + S + H N + R
Sbjct: 1667 PYLIRGYPDTAALENRQTIINDYITSQQMHHNAATAMAQR 1706
Score = 41 (19.5 bits), Expect = 3.6e-07, Sum P(4) = 3.6e-07
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 881 SEAMSSCITSSVDPAEGQRDWRRQKADSVMRLPSTSDVTQN 921
S++ ++C VD AEG D R + L T D N
Sbjct: 915 SDSSATCSADEVDEAEGG-DKNRLLSPRPSLLTPTGDPRAN 954
Score = 40 (19.1 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 1502 KYPAAFGGYPASSSKMEQQSLQAAVVKSNERHL 1534
K PAA A +E + ++A+ V NE +
Sbjct: 685 KAPAAASEEAAFPPVVEDEEMEASGVSGNEEEM 717
Score = 40 (19.1 bits), Expect = 6.8e-12, Sum P(4) = 6.8e-12
Identities = 17/71 (23%), Positives = 29/71 (40%)
Query: 1032 KTDEELPSHVIHSNQEESCSAGAKNLQTDLNKPEDD--NGIT------PLNDKDSEAVKP 1083
K +E + + +E+ A A+ L D K E+ + T P KD+EA +
Sbjct: 827 KEEETAAAPPVEEGEEQKPPA-AEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEAAEA 885
Query: 1084 VNNDAFRTESR 1094
A + E +
Sbjct: 886 TAEGALKAEKK 896
Score = 37 (18.1 bits), Expect = 3.9e-11, Sum P(5) = 3.9e-11
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 1500 LAKYPAAFGGYPASS 1514
LAK PA G PASS
Sbjct: 1957 LAKPPARSGLEPASS 1971
Score = 37 (18.1 bits), Expect = 8.8e-07, Sum P(4) = 8.8e-07
Identities = 11/46 (23%), Positives = 20/46 (43%)
Query: 1143 EESDPCPSSSNAVEETNDVVAEASTEGFGNGLERYQPMLLENSLND 1188
++ P P SS ++ + EA E +E + LL+ +D
Sbjct: 507 QQQQPMPRSSQEEKDEKEKEKEAEKEEEKPEVENDKEDLLKEKTDD 552
>UNIPROTKB|Q9Y618 [details] [associations]
symbol:NCOR2 "Nuclear receptor corepressor 2" species:9606
"Homo sapiens" [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005112 "Notch binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA;IMP;TAS] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0003714 "transcription corepressor activity"
evidence=IDA;IMP] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0044255 "cellular
lipid metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0017053 "transcriptional
repressor complex" evidence=IDA] [GO:0072365 "regulation of
cellular ketone metabolic process by negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0005730 "nucleolus" evidence=IDA] Reactome:REACT_71
Reactome:REACT_111217 InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0005634
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111045
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0044281
GO:GO:0003677 GO:GO:0007219 GO:GO:0044255 GO:GO:0003682
Pathway_Interaction_DB:rxr_vdr_pathway Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0007179 InterPro:IPR017884
PROSITE:PS51293 eggNOG:NOG12793
Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0006367
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016604 PDB:1R2B
PDBsum:1R2B PDB:2GPV PDBsum:2GPV PDB:2L5G PDBsum:2L5G PDB:4A69
PDBsum:4A69 PDB:2ODD PDBsum:2ODD HOVERGEN:HBG052587 EMBL:S83390
EMBL:AF113003 EMBL:AF125672 EMBL:AY965853 EMBL:AC069261
EMBL:AC073916 EMBL:AB209089 EMBL:U80750 EMBL:U80761 EMBL:U37146
IPI:IPI00001735 IPI:IPI00878336 IPI:IPI00923436 IPI:IPI00923531
IPI:IPI00923596 PIR:S60255 RefSeq:NP_001070729.2
RefSeq:NP_001193583.1 RefSeq:NP_006303.4 UniGene:Hs.137510 PDB:1KKQ
PDB:1XC5 PDB:2LTP PDB:3R29 PDB:3R2A PDBsum:1KKQ PDBsum:1XC5
PDBsum:2LTP PDBsum:3R29 PDBsum:3R2A ProteinModelPortal:Q9Y618
SMR:Q9Y618 DIP:DIP-951N IntAct:Q9Y618 MINT:MINT-129997
STRING:Q9Y618 PhosphoSite:Q9Y618 DMDM:226713806 PaxDb:Q9Y618
PRIDE:Q9Y618 Ensembl:ENST00000356219 GeneID:9612 KEGG:hsa:9612
UCSC:uc001ugj.1 UCSC:uc010tax.2 CTD:9612 GeneCards:GC12M124808
H-InvDB:HIX0026341 HGNC:HGNC:7673 HPA:HPA001928 MIM:600848
neXtProt:NX_Q9Y618 PharmGKB:PA31478 KO:K06065 BindingDB:Q9Y618
ChEMBL:CHEMBL5949 ChiTaRS:NCOR2 EvolutionaryTrace:Q9Y618
GenomeRNAi:9612 NextBio:36061 ArrayExpress:Q9Y618 Bgee:Q9Y618
CleanEx:HS_NCOR2 Genevestigator:Q9Y618 GermOnline:ENSG00000196498
GO:GO:0072365 Uniprot:Q9Y618
Length = 2525
Score = 200 (75.5 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 64/274 (23%), Positives = 127/274 (46%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
L +I N++ A A +L+ L P+ + + + ++++ + +KK +L
Sbjct: 226 LVQIIYDENRKKAEAAHRILEGLGPQ--VELPLYNQPSDTRQYHENIKINQAMRKKLILY 283
Query: 591 FK---------ERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKH 641
FK E+ ++ W + + + R + K + +K
Sbjct: 284 FKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQ 343
Query: 642 RS---SIRSRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILD 692
R ++SR LS+ + +E+I+ S+ ++ K R +P ++ D
Sbjct: 344 RELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSE--QENLEKQMRQLAVIPPMLYD 401
Query: 693 KKEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNY 752
++ +FI+ NGL+ DP V K+R ++N W+ +E+E F +K K+F IASFL
Sbjct: 402 A-DQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLER 460
Query: 753 KTTADCVEFYYKNHKSDCFEKLKKKHDFSKQGKT 786
KT A+CV +YY K++ ++ L ++ + ++GK+
Sbjct: 461 KTVAECVLYYYLTKKNENYKSLVRR-SYRRRGKS 493
Score = 88 (36.0 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 936 DPSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLI 990
+ S WT+EE + + +G+++S IAR + +++ QCK F+ +K LD I
Sbjct: 611 ESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNLDEI 665
Score = 44 (20.5 bits), Expect = 2.1e-11, Sum P(5) = 2.1e-11
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 1295 QHLSVHSIVNHVESPQILNGYP 1316
+HL+ + H+ P ++ GYP
Sbjct: 1661 RHLAPNPTYPHLYPPYLIRGYP 1682
Score = 43 (20.2 bits), Expect = 3.5e-12, Sum P(4) = 3.5e-12
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 1055 KNLQTDLNKPEDDNGI------TPLNDKDSEAVKPVNNDAFRTESR 1094
+NLQ + + P+ +P D EA KPV AF E++
Sbjct: 1003 QNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAEAQ 1048
Score = 43 (20.2 bits), Expect = 4.3e-07, Sum P(5) = 4.3e-07
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 861 GGERETAAADVLAGICGSLSSEAMSSCITSSVD-PAEGQ 898
G E++ AA+ LA G S C + + PA+G+
Sbjct: 840 GEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGK 878
Score = 42 (19.8 bits), Expect = 3.5e-12, Sum P(4) = 3.5e-12
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 1504 PAAFGGYPASSSKMEQQSLQAAVVKSNERHLNGVAVVPPR 1543
P GYP +++ +Q++ + S + H N + R
Sbjct: 1675 PYLIRGYPDTAALENRQTIINDYITSQQMHHNAATAMAQR 1714
Score = 41 (19.5 bits), Expect = 6.7e-07, Sum P(5) = 6.7e-07
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 881 SEAMSSCITSSVDPAEGQRDWRRQKADSVMRLPSTSDVTQN 921
S++ ++C VD AEG D R + L T D N
Sbjct: 915 SDSSATCSADEVDEAEGG-DKNRLLSPRPSLLTPTGDPRAN 954
Score = 40 (19.1 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 1502 KYPAAFGGYPASSSKMEQQSLQAAVVKSNERHL 1534
K PAA A +E + ++A+ V NE +
Sbjct: 685 KAPAAASEEAAFPPVVEDEEMEASGVSGNEEEM 717
Score = 40 (19.1 bits), Expect = 4.0e-11, Sum P(5) = 4.0e-11
Identities = 17/71 (23%), Positives = 29/71 (40%)
Query: 1032 KTDEELPSHVIHSNQEESCSAGAKNLQTDLNKPEDD--NGIT------PLNDKDSEAVKP 1083
K +E + + +E+ A A+ L D K E+ + T P KD+EA +
Sbjct: 827 KEEETAAAPPVEEGEEQKPPA-AEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEAAEA 885
Query: 1084 VNNDAFRTESR 1094
A + E +
Sbjct: 886 TAEGALKAEKK 896
Score = 37 (18.1 bits), Expect = 2.1e-11, Sum P(5) = 2.1e-11
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 1500 LAKYPAAFGGYPASS 1514
LAK PA G PASS
Sbjct: 1968 LAKPPARSGLEPASS 1982
Score = 37 (18.1 bits), Expect = 9.0e-07, Sum P(4) = 9.0e-07
Identities = 11/46 (23%), Positives = 20/46 (43%)
Query: 1143 EESDPCPSSSNAVEETNDVVAEASTEGFGNGLERYQPMLLENSLND 1188
++ P P SS ++ + EA E +E + LL+ +D
Sbjct: 507 QQQQPMPRSSQEEKDEKEKEKEAEKEEEKPEVENDKEDLLKEKTDD 552
>UNIPROTKB|J3KS51 [details] [associations]
symbol:NCOR1 "Nuclear receptor corepressor 1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 HGNC:HGNC:7672
ChiTaRS:NCOR1 EMBL:AC002553 EMBL:AC005971 Ensembl:ENST00000582357
Uniprot:J3KS51
Length = 546
Score = 206 (77.6 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 59/239 (24%), Positives = 110/239 (46%)
Query: 558 HSNIDISGVANVFCCQNDSLVKEK---FAKKKQLLRFKERVLTLKFKAFQHLWREDLRLL 614
H NI +GV +N + K+ F ++ + +E+ + ++ W + + +
Sbjct: 276 HENIK-TGVPARRMMKNQVMRKKLILFFKRRNHARKQREQKICQRYDQLMEAWEKKVDRI 334
Query: 615 SIRKYRARSQKKCELSLRTTYTGYQKHRSSIR--SRFSSPAGNLSLV------QTAEVIN 666
R + K + +K R R LS + +E+I+
Sbjct: 335 ENNPRRKAKESKTREYYEKQFPEIRKQREQQERFQRVGQRGAGLSATIARSEHEISEIID 394
Query: 667 FTSKLLSDSQIKTYRNSLKMPALILDKKEKMSSRFISSNGLVEDPCAVEKERAMINPWTS 726
S+ ++ K R +P ++ D +++ +FI+ NGL+EDP V K+R +N WT
Sbjct: 395 GLSE--QENNEKQMRQLSVIPPMMFDAEQRRV-KFINMNGLMEDPMKVYKDRQFMNVWTD 451
Query: 727 EEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDCFEKLKKKHDFSKQGK 785
E+EIF DK K+F IAS+L K+ DCV +YY K++ ++ L +++ ++G+
Sbjct: 452 HEKEIFKDKFIQHPKNFGLIASYLERKSVPDCVLYYYLTKKNENYKALVRRNYGKRRGR 510
>MGI|MGI:1337080 [details] [associations]
symbol:Ncor2 "nuclear receptor co-repressor 2" species:10090
"Mus musculus" [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IMP;IDA]
[GO:0000785 "chromatin" evidence=ISO] [GO:0001012 "RNA polymerase
II regulatory region DNA binding" evidence=ISO] [GO:0001701 "in
utero embryonic development" evidence=IMP] [GO:0003007 "heart
morphogenesis" evidence=IGI;IMP] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=ISO;IDA]
[GO:0003714 "transcription corepressor activity"
evidence=ISO;IGI;IDA;IMP] [GO:0005112 "Notch binding" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016604 "nuclear body"
evidence=ISO;IDA] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=ISO] [GO:0017053 "transcriptional repressor
complex" evidence=ISO] [GO:0021537 "telencephalon development"
evidence=IMP] [GO:0021846 "cell proliferation in forebrain"
evidence=IMP] [GO:0030900 "forebrain development" evidence=IMP]
[GO:0032403 "protein complex binding" evidence=ISO] [GO:0035259
"glucocorticoid receptor binding" evidence=ISO] [GO:0042593
"glucose homeostasis" evidence=IMP] [GO:0042826 "histone
deacetylase binding" evidence=ISO] [GO:0042974 "retinoic acid
receptor binding" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045599 "negative regulation of fat cell
differentiation" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0046965
"retinoid X receptor binding" evidence=ISO] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0050872 "white fat cell
differentiation" evidence=IMP] [GO:0072365 "regulation of cellular
ketone metabolic process by negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 MGI:MGI:1337080
GO:GO:0003714 GO:GO:0003007 GO:GO:0043565 GO:GO:0001701
GO:GO:0050872 GO:GO:0006351 GO:GO:0003682 GO:GO:0042593
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
Reactome:REACT_127416 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0045599 eggNOG:NOG12793 GO:GO:0016604 GO:GO:0021846
GO:GO:0021537 Reactome:REACT_27166 GO:GO:0000118
HOGENOM:HOG000113746 HOVERGEN:HBG052587 CTD:9612 KO:K06065
ChiTaRS:NCOR2 EMBL:AF113001 EMBL:AF113002 EMBL:AF125671
EMBL:AC132118 EMBL:AC139377 IPI:IPI00123871 IPI:IPI00222492
RefSeq:NP_001240833.1 RefSeq:NP_001240834.1 UniGene:Mm.278646
UniGene:Mm.472258 ProteinModelPortal:Q9WU42 SMR:Q9WU42
MINT:MINT-3154743 STRING:Q9WU42 PhosphoSite:Q9WU42 PaxDb:Q9WU42
PRIDE:Q9WU42 Ensembl:ENSMUST00000111394 Ensembl:ENSMUST00000111398
GeneID:20602 KEGG:mmu:20602 UCSC:uc008zqv.1 UCSC:uc008zqx.1
GeneTree:ENSGT00550000074554 NextBio:298933 Bgee:Q9WU42
CleanEx:MM_NCOR2 Genevestigator:Q9WU42
GermOnline:ENSMUSG00000029478 Uniprot:Q9WU42
Length = 2472
Score = 200 (75.5 bits), Expect = 1.3e-12, Sum P(4) = 1.3e-12
Identities = 65/274 (23%), Positives = 126/274 (45%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
L +I N++ A A +L+ L P+ + + + ++++ + +KK +L
Sbjct: 226 LVQIIYDENRKKAEAAHRILEGLGPQ--VELPLYNQPSDTRQYHENIKINQAMRKKLILY 283
Query: 591 FKERVLTLK---------FKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKH 641
FK R K + W + + + R + K + +K
Sbjct: 284 FKRRNHARKQWEQRFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQ 343
Query: 642 RS---SIRSRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILD 692
R ++SR LS+ + +E+I+ S+ ++ K R +P ++ D
Sbjct: 344 RELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSE--QENLEKQMRQLAVIPPMLYD 401
Query: 693 KKEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNY 752
++ +FI+ NGL++DP V K+R + N W+ +ER+ F +K K+F IASFL
Sbjct: 402 A-DQQRIKFINMNGLMDDPMKVYKDRQVTNMWSEQERDTFREKFMQHPKNFGLIASFLER 460
Query: 753 KTTADCVEFYYKNHKSDCFEKLKKKHDFSKQGKT 786
KT A+CV +YY K++ ++ L ++ + ++GK+
Sbjct: 461 KTVAECVLYYYLTKKNENYKSLVRR-SYRRRGKS 493
Score = 96 (38.9 bits), Expect = 1.3e-12, Sum P(4) = 1.3e-12
Identities = 41/190 (21%), Positives = 83/190 (43%)
Query: 903 RQKADSVMRLPSTSDVTQNVDDDTCSDESCGEMDPSD-WTDEEKSIFIQAVTSYGKDFSM 961
R+K + + ++ + S+ + EM+ S WT+EE + + +G+++S
Sbjct: 573 RRKGRITRSMANEANHEETATPQQSSELASMEMNESSRWTEEEMETAKKGLLEHGRNWSA 632
Query: 962 IARCIRTRSRDQCKVFFSKARKCLGLDLIHTGRGNVGPSVNDDANGGGSDTEDACVLETS 1021
IAR + +++ QCK F+ +K LD I + + +A T A ET+
Sbjct: 633 IARMVGSKTVSQCKNFYFNYKKRQNLDEI-LQQHKLKMEKERNARRKKKKTPAAASEETA 691
Query: 1022 SVNCSDKLGSKTDEELPSHVIHSNQEESCSAGAKNLQTDLNKPE--DDNGITPLNDK-DS 1078
++ DEE+ + +N+EE + + P + +G +N+ D+
Sbjct: 692 FPPAAE------DEEMEASGASANEEELAEEAEASQASGNEVPRVGECSGPAAVNNSSDT 745
Query: 1079 EAVKPVNNDA 1088
E+V ++A
Sbjct: 746 ESVPSPRSEA 755
Score = 43 (20.2 bits), Expect = 1.3e-12, Sum P(4) = 1.3e-12
Identities = 9/40 (22%), Positives = 19/40 (47%)
Query: 1504 PAAFGGYPASSSKMEQQSLQAAVVKSNERHLNGVAVVPPR 1543
P GYP +++ +Q++ + S + H N + + R
Sbjct: 1638 PYLIRGYPDTAALENRQTIINDYITSQQMHHNAASAMAQR 1677
Score = 42 (19.8 bits), Expect = 1.6e-12, Sum P(4) = 1.6e-12
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 1295 QHLSVHSIVNHVESPQILNGYP 1316
+HL+ H+ P ++ GYP
Sbjct: 1624 RHLAPSPTYPHLYPPYLIRGYP 1645
Score = 38 (18.4 bits), Expect = 1.3e-12, Sum P(4) = 1.3e-12
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 1071 TPLNDKDSEAVKPVNNDAFRTESRSFELE 1099
+P+ + EA KP AF TE E
Sbjct: 1023 SPVPPAEKEAEKPAFFPAFPTEGPKLPTE 1051
Score = 38 (18.4 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 1502 KYPAAFGGYPASSSKMEQQSLQAAVVKSNERHL 1534
K PAA A E + ++A+ +NE L
Sbjct: 681 KTPAAASEETAFPPAAEDEEMEASGASANEEEL 713
>UNIPROTKB|F1LS82 [details] [associations]
symbol:Ncor1 "Nuclear receptor corepressor 1" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 OMA:PPMDRIT IPI:IPI00780719
GeneTree:ENSGT00550000074554 PRIDE:F1LS82
Ensembl:ENSRNOT00000057682 ArrayExpress:F1LS82 Uniprot:F1LS82
Length = 2453
Score = 213 (80.0 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 72/315 (22%), Positives = 141/315 (44%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
+ +I N++ A EA ++ + L P+ + + + ++++ + +KK +L
Sbjct: 236 IVQIIYDENRKKAEEAHKIFEGLGPK--VELPLYNQPSDTKVYHENIKTNQVMRKKLILF 293
Query: 591 FK---------ERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKH 641
FK E+ + ++ W + + + R + K + +K
Sbjct: 294 FKRRNHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQ 353
Query: 642 RSSIR--SRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILDK 693
R R LS + +E+I+ S+ ++ K R +P ++ D
Sbjct: 354 REQQERFQRVGQRGAGLSATIARSEHEISEIIDGLSE--QENNEKQMRQLSVIPPMMFDA 411
Query: 694 KEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYK 753
+++ +FI+ NGL+EDP V K+R +N WT E+EIF DK K+F IAS+L K
Sbjct: 412 EQRRV-KFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDKFIQHPKNFGLIASYLERK 470
Query: 754 TTADCVEFYYKNHKSDCFEKLKKKHDFSKQGKTSTNTYLVTTGKRNRKMNAASLDILGEA 813
+ DCV +YY K++ ++ L +++ ++G+ N L RNRK + ++ ++
Sbjct: 471 SVPDCVLYYYLTKKNENYKALVRRNYGKRRGR---NQSLA----RNRKSELKKIILMDDS 523
Query: 814 --SEIAAAAQVDGRQ 826
+E+ A D +
Sbjct: 524 MSTEVGEADSKDDEE 538
Score = 71 (30.1 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 49/248 (19%), Positives = 91/248 (36%)
Query: 935 MDPSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKC----LGLDLI 990
++ S WT+EE + + + + I+ + T R CK + RK GL+L
Sbjct: 623 VETSRWTEEEMEVAKKGNIQQSEYYFGISTILGTEPRALCKYIYFGIRKSHLTKAGLELE 682
Query: 991 HTGRGNVGPSVNDDANGGGSDTEDACVLETSSVNCSDKLGSKTDEELPSHVIHSNQEESC 1050
H+ P D S E V TS+ D + + +EE P +
Sbjct: 683 HSSASRK-PREERDV----SQCES--VASTSAQEDED-IEASNEEENPEDSEGAENSSDT 734
Query: 1051 SAGAKNLQTDLNKPEDDNGITPLNDKDSEAVKPVN--NDAFRTESRSFELESNNMNGMDN 1108
+ + K +D+ + ++E V + D S S + +
Sbjct: 735 ESAPSPSPVEAAKSSEDSSENAASRGNTEPVAELEATTDPAPCASPSSAVPTTK----PA 790
Query: 1109 QSESVLDQKNAVELFKTAVRDKVAEQGAVSVSAGEESDPCPSSSNAVEETNDVVAEASTE 1168
+SESV Q +TA V + + + P P+ +++V+ V +++
Sbjct: 791 ESESVEAQVTDSASVETAEPMDVDHEECGAQGSSVLDPPAPTKADSVDPEIQVPENTASK 850
Query: 1169 GFGNGLER 1176
G G+ +R
Sbjct: 851 GEGDAKDR 858
Score = 57 (25.1 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 24/104 (23%), Positives = 41/104 (39%)
Query: 1357 YLRKCNSSMPHSSVTELP------FLAENIEQTSDRRRAHSCSFSDTEKPSKNGDVKLFG 1410
+L K + HSS + P E++ TS + + ++ E P + +
Sbjct: 673 HLTKAGLELEHSSASRKPREERDVSQCESVASTSAQEDEDIEASNEEENPEDSEGAENSS 732
Query: 1411 KILSHPSSSQ-KSAFSSHDNGENGHHHKQSSKASNLKFTAHHPP 1453
S PS S ++A SS D+ EN + + L+ T P
Sbjct: 733 DTESAPSPSPVEAAKSSEDSSENAASRGNTEPVAELEATTDPAP 776
Score = 42 (19.8 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 1366 PHSSVTELPFLAENIEQTSDRRRAHSCSFSDTEKPSK 1402
PHS + E L+ +I Q + R A S F D K K
Sbjct: 1294 PHSDLKERTVLSGSIMQGTPRATAES--FEDGLKYPK 1328
Score = 40 (19.1 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 24/101 (23%), Positives = 38/101 (37%)
Query: 987 LDLIHTGRGNVGPSVNDDANGGGSDTEDACVLETSSVNCSDKLGSKTDEELPSHVIHSNQ 1046
+D+ H G G SV D +D+ D ++ S G D +L S +
Sbjct: 811 MDVDHEECGAQGSSVLDPPAPTKADSVDP-EIQVPENTASKGEGDAKDRDLESASEKTEA 869
Query: 1047 EESCSAGAKNLQTDLNKPEDDNGITPLNDKDSEAVKPVNND 1087
+ A+ +Q +PE P +D DS A + D
Sbjct: 870 RDEDLVVAEQMQ----RPE------PQSDNDSSATCSADED 900
>UNIPROTKB|C9JE98 [details] [associations]
symbol:NCOR2 "Nuclear receptor corepressor 2" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 EMBL:AC069261
EMBL:AC073916 IPI:IPI00923531 RefSeq:NP_001070729.2
UniGene:Hs.137510 GeneID:9612 KEGG:hsa:9612 CTD:9612 HGNC:HGNC:7673
KO:K06065 ChiTaRS:NCOR2 GenomeRNAi:9612 NextBio:36061 EMBL:AC073592
ProteinModelPortal:C9JE98 SMR:C9JE98 STRING:C9JE98 PRIDE:C9JE98
Ensembl:ENST00000404621 UCSC:uc010tbc.2 ArrayExpress:C9JE98
Bgee:C9JE98 Uniprot:C9JE98
Length = 2458
Score = 193 (73.0 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 63/273 (23%), Positives = 124/273 (45%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
L +I N++ A A +L+ L P+ + + + ++++ + +KK +L
Sbjct: 226 LVQIIYDENRKKAEAAHRILEGLGPQ--VELPLYNQPSDTRQYHENIKINQAMRKKLILY 283
Query: 591 FK---------ERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKH 641
FK E+ ++ W + + + R + K + +K
Sbjct: 284 FKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQ 343
Query: 642 RS--SIRSRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILDK 693
R R LS+ + +E+I+ S+ ++ K R +P ++ D
Sbjct: 344 RELQERMQRVGQRGSGLSMSAARSEHEVSEIIDGLSE--QENLEKQMRQLAVIPPMLYDA 401
Query: 694 KEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYK 753
++ +FI+ NGL+ DP V K+R ++N W+ +E+E F +K K+F IASFL K
Sbjct: 402 -DQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERK 460
Query: 754 TTADCVEFYYKNHKSDCFEKLKKKHDFSKQGKT 786
T A+CV +YY K++ ++ L ++ + ++GK+
Sbjct: 461 TVAECVLYYYLTKKNENYKSLVRR-SYRRRGKS 492
Score = 90 (36.7 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 35/146 (23%), Positives = 66/146 (45%)
Query: 936 DPSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLD-LIHTGR 994
+ S WT+EE + + +G+++S IAR + +++ QCK F+ +K LD ++ +
Sbjct: 610 ESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNLDEILQQHK 669
Query: 995 GNVGPSVN---DDANGGGSDTEDAC---VLETSSVNCSDKLGSKTD--EELPSHVIHSNQ 1046
+ N + +E+A V+E + S G++ + EE + V +S+
Sbjct: 670 LKMEKERNARRKKKKAPAAASEEAAFPPVVEDEEMEASGVSGNEEEMVEEAEATVNNSSD 729
Query: 1047 EESCSAGAKNLQTDLNKPEDDNGITP 1072
ES + T+ K NG P
Sbjct: 730 TESIPSP----HTEAAKDTGQNGPKP 751
Score = 44 (20.5 bits), Expect = 2.6e-11, Sum P(4) = 2.6e-11
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 1295 QHLSVHSIVNHVESPQILNGYP 1316
+HL+ + H+ P ++ GYP
Sbjct: 1643 RHLAPNPTYPHLYPPYLIRGYP 1664
Score = 43 (20.2 bits), Expect = 1.8e-06, Sum P(5) = 1.8e-06
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 861 GGERETAAADVLAGICGSLSSEAMSSCITSSVD-PAEGQ 898
G E++ AA+ LA G S C + + PA+G+
Sbjct: 822 GEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGK 860
Score = 43 (20.2 bits), Expect = 1.8e-06, Sum P(5) = 1.8e-06
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 1055 KNLQTDLNKPEDDNGI------TPLNDKDSEAVKPVNNDAFRTESR 1094
+NLQ + + P+ +P D EA KPV AF E++
Sbjct: 985 QNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAEAQ 1030
Score = 42 (19.8 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 1504 PAAFGGYPASSSKMEQQSLQAAVVKSNERHLNGVAVVPPR 1543
P GYP +++ +Q++ + S + H N + R
Sbjct: 1657 PYLIRGYPDTAALENRQTIINDYITSQQMHHNAATAMAQR 1696
Score = 41 (19.5 bits), Expect = 2.9e-06, Sum P(5) = 2.9e-06
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 881 SEAMSSCITSSVDPAEGQRDWRRQKADSVMRLPSTSDVTQN 921
S++ ++C VD AEG D R + L T D N
Sbjct: 897 SDSSATCSADEVDEAEGG-DKNRLLSPRPSLLTPTGDPRAN 936
Score = 40 (19.1 bits), Expect = 7.3e-07, Sum P(3) = 7.3e-07
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 1502 KYPAAFGGYPASSSKMEQQSLQAAVVKSNERHL 1534
K PAA A +E + ++A+ V NE +
Sbjct: 684 KAPAAASEEAAFPPVVEDEEMEASGVSGNEEEM 716
Score = 40 (19.1 bits), Expect = 2.1e-06, Sum P(4) = 2.1e-06
Identities = 17/71 (23%), Positives = 29/71 (40%)
Query: 1032 KTDEELPSHVIHSNQEESCSAGAKNLQTDLNKPEDD--NGIT------PLNDKDSEAVKP 1083
K +E + + +E+ A A+ L D K E+ + T P KD+EA +
Sbjct: 809 KEEETAAAPPVEEGEEQKPPA-AEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEAAEA 867
Query: 1084 VNNDAFRTESR 1094
A + E +
Sbjct: 868 TAEGALKAEKK 878
Score = 37 (18.1 bits), Expect = 2.6e-11, Sum P(4) = 2.6e-11
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 1500 LAKYPAAFGGYPASS 1514
LAK PA G PASS
Sbjct: 1947 LAKPPARSGLEPASS 1961
Score = 37 (18.1 bits), Expect = 7.3e-07, Sum P(3) = 7.3e-07
Identities = 11/46 (23%), Positives = 20/46 (43%)
Query: 1143 EESDPCPSSSNAVEETNDVVAEASTEGFGNGLERYQPMLLENSLND 1188
++ P P SS ++ + EA E +E + LL+ +D
Sbjct: 506 QQQQPMPRSSQEEKDEKEKEKEAEKEEEKPEVENDKEDLLKEKTDD 551
>UNIPROTKB|C9J0Q5 [details] [associations]
symbol:NCOR2 "Nuclear receptor corepressor 2" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
HOGENOM:HOG000113746 EMBL:AC069261 EMBL:AC073916
RefSeq:NP_001193583.1 UniGene:Hs.137510 GeneID:9612 KEGG:hsa:9612
CTD:9612 HGNC:HGNC:7673 KO:K06065 ChiTaRS:NCOR2 GenomeRNAi:9612
NextBio:36061 EMBL:AC073592 IPI:IPI00952657
ProteinModelPortal:C9J0Q5 SMR:C9J0Q5 STRING:C9J0Q5 PRIDE:C9J0Q5
Ensembl:ENST00000429285 UCSC:uc021rgc.1 ArrayExpress:C9J0Q5
Bgee:C9J0Q5 Uniprot:C9J0Q5
Length = 2504
Score = 193 (73.0 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 63/273 (23%), Positives = 124/273 (45%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
L +I N++ A A +L+ L P+ + + + ++++ + +KK +L
Sbjct: 226 LVQIIYDENRKKAEAAHRILEGLGPQ--VELPLYNQPSDTRQYHENIKINQAMRKKLILY 283
Query: 591 FK---------ERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKH 641
FK E+ ++ W + + + R + K + +K
Sbjct: 284 FKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQ 343
Query: 642 RS--SIRSRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILDK 693
R R LS+ + +E+I+ S+ ++ K R +P ++ D
Sbjct: 344 RELQERMQRVGQRGSGLSMSAARSEHEVSEIIDGLSE--QENLEKQMRQLAVIPPMLYDA 401
Query: 694 KEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYK 753
++ +FI+ NGL+ DP V K+R ++N W+ +E+E F +K K+F IASFL K
Sbjct: 402 -DQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERK 460
Query: 754 TTADCVEFYYKNHKSDCFEKLKKKHDFSKQGKT 786
T A+CV +YY K++ ++ L ++ + ++GK+
Sbjct: 461 TVAECVLYYYLTKKNENYKSLVRR-SYRRRGKS 492
Score = 90 (36.7 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 35/146 (23%), Positives = 66/146 (45%)
Query: 936 DPSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLD-LIHTGR 994
+ S WT+EE + + +G+++S IAR + +++ QCK F+ +K LD ++ +
Sbjct: 610 ESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNLDEILQQHK 669
Query: 995 GNVGPSVN---DDANGGGSDTEDAC---VLETSSVNCSDKLGSKTD--EELPSHVIHSNQ 1046
+ N + +E+A V+E + S G++ + EE + V +S+
Sbjct: 670 LKMEKERNARRKKKKAPAAASEEAAFPPVVEDEEMEASGVSGNEEEMVEEAEATVNNSSD 729
Query: 1047 EESCSAGAKNLQTDLNKPEDDNGITP 1072
ES + T+ K NG P
Sbjct: 730 TESIPSP----HTEAAKDTGQNGPKP 751
Score = 44 (20.5 bits), Expect = 2.8e-11, Sum P(4) = 2.8e-11
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 1295 QHLSVHSIVNHVESPQILNGYP 1316
+HL+ + H+ P ++ GYP
Sbjct: 1643 RHLAPNPTYPHLYPPYLIRGYP 1664
Score = 43 (20.2 bits), Expect = 2.0e-06, Sum P(5) = 2.0e-06
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 861 GGERETAAADVLAGICGSLSSEAMSSCITSSVD-PAEGQ 898
G E++ AA+ LA G S C + + PA+G+
Sbjct: 822 GEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGK 860
Score = 43 (20.2 bits), Expect = 2.0e-06, Sum P(5) = 2.0e-06
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 1055 KNLQTDLNKPEDDNGI------TPLNDKDSEAVKPVNNDAFRTESR 1094
+NLQ + + P+ +P D EA KPV AF E++
Sbjct: 985 QNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAEAQ 1030
Score = 42 (19.8 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 1504 PAAFGGYPASSSKMEQQSLQAAVVKSNERHLNGVAVVPPR 1543
P GYP +++ +Q++ + S + H N + R
Sbjct: 1657 PYLIRGYPDTAALENRQTIINDYITSQQMHHNAATAMAQR 1696
Score = 41 (19.5 bits), Expect = 3.1e-06, Sum P(5) = 3.1e-06
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 881 SEAMSSCITSSVDPAEGQRDWRRQKADSVMRLPSTSDVTQN 921
S++ ++C VD AEG D R + L T D N
Sbjct: 897 SDSSATCSADEVDEAEGG-DKNRLLSPRPSLLTPTGDPRAN 936
Score = 40 (19.1 bits), Expect = 7.7e-07, Sum P(3) = 7.7e-07
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 1502 KYPAAFGGYPASSSKMEQQSLQAAVVKSNERHL 1534
K PAA A +E + ++A+ V NE +
Sbjct: 684 KAPAAASEEAAFPPVVEDEEMEASGVSGNEEEM 716
Score = 40 (19.1 bits), Expect = 2.2e-06, Sum P(4) = 2.2e-06
Identities = 17/71 (23%), Positives = 29/71 (40%)
Query: 1032 KTDEELPSHVIHSNQEESCSAGAKNLQTDLNKPEDD--NGIT------PLNDKDSEAVKP 1083
K +E + + +E+ A A+ L D K E+ + T P KD+EA +
Sbjct: 809 KEEETAAAPPVEEGEEQKPPA-AEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEAAEA 867
Query: 1084 VNNDAFRTESR 1094
A + E +
Sbjct: 868 TAEGALKAEKK 878
Score = 37 (18.1 bits), Expect = 2.8e-11, Sum P(4) = 2.8e-11
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 1500 LAKYPAAFGGYPASS 1514
LAK PA G PASS
Sbjct: 1947 LAKPPARSGLEPASS 1961
Score = 37 (18.1 bits), Expect = 7.7e-07, Sum P(3) = 7.7e-07
Identities = 11/46 (23%), Positives = 20/46 (43%)
Query: 1143 EESDPCPSSSNAVEETNDVVAEASTEGFGNGLERYQPMLLENSLND 1188
++ P P SS ++ + EA E +E + LL+ +D
Sbjct: 506 QQQQPMPRSSQEEKDEKEKEKEAEKEEEKPEVENDKEDLLKEKTDD 551
>UNIPROTKB|C9J330 [details] [associations]
symbol:NCOR2 "Nuclear receptor corepressor 2" species:9606
"Homo sapiens" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0001012 "RNA polymerase II regulatory
region DNA binding" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003007 "heart morphogenesis"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0007595 "lactation" evidence=IEA] [GO:0010243 "response to
organic nitrogen" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=IEA] [GO:0021537 "telencephalon development"
evidence=IEA] [GO:0021846 "cell proliferation in forebrain"
evidence=IEA] [GO:0032355 "response to estradiol stimulus"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0035259 "glucocorticoid receptor binding" evidence=IEA]
[GO:0042593 "glucose homeostasis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045599 "negative
regulation of fat cell differentiation" evidence=IEA] [GO:0046965
"retinoid X receptor binding" evidence=IEA] [GO:0050872 "white fat
cell differentiation" evidence=IEA] [GO:0060206 "estrous cycle
phase" evidence=IEA] InterPro:IPR001005 InterPro:IPR009057
SMART:SM00717 GO:GO:0003714 GO:GO:0003007 GO:GO:0043565
GO:GO:0001701 GO:GO:0050872 GO:GO:0003682 GO:GO:0042593
SUPFAM:SSF46689 GO:GO:0000122 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0045599 GO:GO:0016604 GO:GO:0021846 GO:GO:0021537
GO:GO:0000118 EMBL:AC069261 EMBL:AC073916 HGNC:HGNC:7673
ChiTaRS:NCOR2 EMBL:AC073592 IPI:IPI00878709
ProteinModelPortal:C9J330 SMR:C9J330 STRING:C9J330
Ensembl:ENST00000420698 UCSC:uc001ugk.1 ArrayExpress:C9J330
Bgee:C9J330 Uniprot:C9J330
Length = 493
Score = 200 (75.5 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 64/274 (23%), Positives = 127/274 (46%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
L +I N++ A A +L+ L P+ + + + ++++ + +KK +L
Sbjct: 226 LVQIIYDENRKKAEAAHRILEGLGPQ--VELPLYNQPSDTRQYHENIKINQAMRKKLILY 283
Query: 591 FK---------ERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKH 641
FK E+ ++ W + + + R + K + +K
Sbjct: 284 FKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQ 343
Query: 642 RS---SIRSRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILD 692
R ++SR LS+ + +E+I+ S+ ++ K R +P ++ D
Sbjct: 344 RELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSE--QENLEKQMRQLAVIPPMLYD 401
Query: 693 KKEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNY 752
++ +FI+ NGL+ DP V K+R ++N W+ +E+E F +K K+F IASFL
Sbjct: 402 A-DQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLER 460
Query: 753 KTTADCVEFYYKNHKSDCFEKLKKKHDFSKQGKT 786
KT A+CV +YY K++ ++ L ++ + ++GK+
Sbjct: 461 KTVAECVLYYYLTKKNENYKSLVRR-SYRRRGKS 493
>UNIPROTKB|F1LS83 [details] [associations]
symbol:Ncor1 "Nuclear receptor corepressor 1" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GeneTree:ENSGT00550000074554
IPI:IPI00764062 Ensembl:ENSRNOT00000057681 ArrayExpress:F1LS83
Uniprot:F1LS83
Length = 2445
Score = 213 (80.0 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 72/315 (22%), Positives = 141/315 (44%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
+ +I N++ A EA ++ + L P+ + + + ++++ + +KK +L
Sbjct: 236 IVQIIYDENRKKAEEAHKIFEGLGPK--VELPLYNQPSDTKVYHENIKTNQVMRKKLILF 293
Query: 591 FK---------ERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKH 641
FK E+ + ++ W + + + R + K + +K
Sbjct: 294 FKRRNHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQ 353
Query: 642 RSSIR--SRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILDK 693
R R LS + +E+I+ S+ ++ K R +P ++ D
Sbjct: 354 REQQERFQRVGQRGAGLSATIARSEHEISEIIDGLSE--QENNEKQMRQLSVIPPMMFDA 411
Query: 694 KEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYK 753
+++ +FI+ NGL+EDP V K+R +N WT E+EIF DK K+F IAS+L K
Sbjct: 412 EQRRV-KFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDKFIQHPKNFGLIASYLERK 470
Query: 754 TTADCVEFYYKNHKSDCFEKLKKKHDFSKQGKTSTNTYLVTTGKRNRKMNAASLDILGEA 813
+ DCV +YY K++ ++ L +++ ++G+ N L RNRK + ++ ++
Sbjct: 471 SVPDCVLYYYLTKKNENYKALVRRNYGKRRGR---NQSLA----RNRKSELKKIILMDDS 523
Query: 814 --SEIAAAAQVDGRQ 826
+E+ A D +
Sbjct: 524 MSTEVGEADSKDDEE 538
Score = 50 (22.7 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 56/231 (24%), Positives = 84/231 (36%)
Query: 1235 KPPLISLPQWNSHPAAASTQDSSVIQCEKAFIQDRMSSTLEFQRSKDKSGHKSVVSDDYR 1294
KP + LPQ H AA S C I +S +QR K+ H+S + ++ R
Sbjct: 941 KPNPLDLPQLQ-HRAAVIPPMVSCTPCNIP-IGTPVSGYALYQRHI-KAMHESALLEEQR 997
Query: 1295 QHLSVHSIVNHVESPQILNGYPLPISTKKEMNGDINCRQLSEVQSISKSDRNIDEPYLAQ 1354
Q + + P T K N + Q + Q I+ + P
Sbjct: 998 QRQEQIDLECRSSTS--------PCGTSKSPNREWEVLQPAPHQVITNLPEGVRLPTTRP 1049
Query: 1355 DCYLRKCNSSMPHSSVT---ELP--FLAENIEQTSDRR--RAHSCSFS-DTEKPSKNGDV 1406
R +P S T E P + +I Q + +HS +++ + KPS G +
Sbjct: 1050 T---RPPPPLIPSSKTTVASEKPSFIMGGSISQGTPGTYLTSHSQAYTPEAAKPSV-GSI 1105
Query: 1407 KLFGKILSHPSSSQKSAFSSHDNGENGHHHKQSSKASNLKFTAHHPPDGGA 1457
L G L S KSA ++ E Q+S+ L A H GA
Sbjct: 1106 SL-G--LPRQQESTKSAPLTYIKQEEFSPRSQNSQPEGLLVRAQHEGTAGA 1153
Score = 49 (22.3 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 18/77 (23%), Positives = 32/77 (41%)
Query: 1378 ENIEQTSDRRRAHSCSFSDTEKPSKNGDVKLFGKILSHPSSSQ-KSAFSSHDNGENGHHH 1436
E++ TS + + ++ E P + + S PS S ++A SS D+ EN
Sbjct: 708 ESVASTSAQEDEDIEASNEEENPEDSEGAENSSDTESAPSPSPVEAAKSSEDSSENAASR 767
Query: 1437 KQSSKASNLKFTAHHPP 1453
+ + L+ T P
Sbjct: 768 GNTEPVAELEATTDPAP 784
Score = 48 (22.0 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 24/118 (20%), Positives = 49/118 (41%)
Query: 1055 KNLQTDLNKPEDDNGITPLNDKDSEAVKPVNNDAFRTESRSFELESNNMNGMDNQSESV- 1113
K ++ KP ++ ++ S + + + D E+ + E + G +N S++
Sbjct: 689 KMIKIASRKPREERDVSQCESVASTSAQE-DEDI---EASNEEENPEDSEGAENSSDTES 744
Query: 1114 LDQKNAVELFKTAV--RDKVAEQG----AVSVSAGEESDPCPSSSNAVEETNDVVAEA 1165
+ VE K++ + A +G + A + PC S S+AV T +E+
Sbjct: 745 APSPSPVEAAKSSEDSSENAASRGNTEPVAELEATTDPAPCASPSSAVPTTKPAESES 802
Score = 45 (20.9 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1134 QGAVSVSAGEESDPCPSSSNAVEETNDVVAEASTEG 1169
+GA + S+ ES P PS A + + D A++ G
Sbjct: 734 EGAEN-SSDTESAPSPSPVEAAKSSEDSSENAASRG 768
Score = 42 (19.8 bits), Expect = 3.2e-10, Sum P(3) = 3.2e-10
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 1366 PHSSVTELPFLAENIEQTSDRRRAHSCSFSDTEKPSK 1402
PHS + E L+ +I Q + R A S F D K K
Sbjct: 1285 PHSDLKERTVLSGSIMQGTPRATAES--FEDGLKYPK 1319
Score = 40 (19.1 bits), Expect = 3.2e-10, Sum P(3) = 3.2e-10
Identities = 24/101 (23%), Positives = 38/101 (37%)
Query: 987 LDLIHTGRGNVGPSVNDDANGGGSDTEDACVLETSSVNCSDKLGSKTDEELPSHVIHSNQ 1046
+D+ H G G SV D +D+ D ++ S G D +L S +
Sbjct: 819 MDVDHEECGAQGSSVLDPPAPTKADSVDP-EIQVPENTASKGEGDAKDRDLESASEKTEA 877
Query: 1047 EESCSAGAKNLQTDLNKPEDDNGITPLNDKDSEAVKPVNND 1087
+ A+ +Q +PE P +D DS A + D
Sbjct: 878 RDEDLVVAEQMQ----RPE------PQSDNDSSATCSADED 908
>UNIPROTKB|F1LSA0 [details] [associations]
symbol:Ncor1 "Nuclear receptor corepressor 1" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717
GO:GO:0005737 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0043565 GO:GO:0040014 GO:GO:0003700 GO:GO:0003682
GO:GO:0042632 SUPFAM:SSF46689 GO:GO:0005667 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0032922 GO:GO:0046329 GO:GO:0005876
GO:GO:0021794 GO:GO:0016580 GO:GO:0031065 GO:GO:0060318
GO:GO:0002361 GO:GO:0014067 GO:GO:0035033 GO:GO:0072362
GO:GO:0072368 GeneTree:ENSGT00550000074554 IPI:IPI00959849
Ensembl:ENSRNOT00000057680 ArrayExpress:F1LSA0 Uniprot:F1LSA0
Length = 2456
Score = 207 (77.9 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 63/272 (23%), Positives = 124/272 (45%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
+ +I N++ A EA ++ + L P+ + + + ++++ + +KK +L
Sbjct: 236 IVQIIYDENRKKAEEAHKIFEGLGPK--VELPLYNQPSDTKVYHENIKTNQVMRKKLILF 293
Query: 591 FK---------ERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKH 641
FK E+ + ++ W + + + R + K + +K
Sbjct: 294 FKRRNHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQ 353
Query: 642 RSSIR--SRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILDK 693
R R LS + +E+I+ S+ ++ K R +P ++ D
Sbjct: 354 REQQERFQRVGQRGAGLSATIARSEHEISEIIDGLSE--QENNEKQMRQLSVIPPMMFDA 411
Query: 694 KEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYK 753
+++ +FI+ NGL+EDP V K+R +N WT E+EIF DK K+F IAS+L K
Sbjct: 412 EQRRV-KFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDKFIQHPKNFGLIASYLERK 470
Query: 754 TTADCVEFYYKNHKSDCFEKLKKKHDFSKQGK 785
+ DCV +YY K++ ++ L +++ ++G+
Sbjct: 471 SVPDCVLYYYLTKKNENYKALVRRNYGKRRGR 502
Score = 49 (22.3 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 18/77 (23%), Positives = 32/77 (41%)
Query: 1378 ENIEQTSDRRRAHSCSFSDTEKPSKNGDVKLFGKILSHPSSSQ-KSAFSSHDNGENGHHH 1436
E++ TS + + ++ E P + + S PS S ++A SS D+ EN
Sbjct: 701 ESVASTSAQEDEDIEASNEEENPEDSEGAENSSDTESAPSPSPVEAAKSSEDSSENAASR 760
Query: 1437 KQSSKASNLKFTAHHPP 1453
+ + L+ T P
Sbjct: 761 GNTEPVAELEATTDPAP 777
Score = 47 (21.6 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 24/106 (22%), Positives = 46/106 (43%)
Query: 1072 PLNDKDSEAVKPVNNDAFRTESRSFELESNNMNGMDNQ-SESVLDQKNA-----VELFKT 1125
P ++D + V + + + E E + N D++ +E+ D ++A VE K+
Sbjct: 691 PREERDVSQCESVASTSAQ-EDEDIEASNEEENPEDSEGAENSSDTESAPSPSPVEAAKS 749
Query: 1126 AV--RDKVAEQG----AVSVSAGEESDPCPSSSNAVEETNDVVAEA 1165
+ + A +G + A + PC S S+AV T +E+
Sbjct: 750 SEDSSENAASRGNTEPVAELEATTDPAPCASPSSAVPTTKPAESES 795
Score = 45 (20.9 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1134 QGAVSVSAGEESDPCPSSSNAVEETNDVVAEASTEG 1169
+GA + S+ ES P PS A + + D A++ G
Sbjct: 727 EGAEN-SSDTESAPSPSPVEAAKSSEDSSENAASRG 761
Score = 42 (19.8 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 1366 PHSSVTELPFLAENIEQTSDRRRAHSCSFSDTEKPSK 1402
PHS + E L+ +I Q + R A S F D K K
Sbjct: 1295 PHSDLKERTVLSGSIMQGTPRATAES--FEDGLKYPK 1329
Score = 42 (19.8 bits), Expect = 5.4e-09, Sum P(3) = 5.4e-09
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 1109 QSESVLDQKNAVELFKTAVRDKVAEQGAVSVSAGEESDPCPSSSNAVEETNDVVAEASTE 1168
+SESV Q +TA V + + + P P+ +++V+ V +++
Sbjct: 792 ESESVEAQVTDSASVETAEPMDVDHEECGAQGSSVLDPPAPTKADSVDPEIQVPENTASK 851
Query: 1169 GFGNGLER 1176
G G+ +R
Sbjct: 852 GEGDAKDR 859
Score = 40 (19.1 bits), Expect = 8.6e-09, Sum P(3) = 8.6e-09
Identities = 24/101 (23%), Positives = 38/101 (37%)
Query: 987 LDLIHTGRGNVGPSVNDDANGGGSDTEDACVLETSSVNCSDKLGSKTDEELPSHVIHSNQ 1046
+D+ H G G SV D +D+ D ++ S G D +L S +
Sbjct: 812 MDVDHEECGAQGSSVLDPPAPTKADSVDP-EIQVPENTASKGEGDAKDRDLESASEKTEA 870
Query: 1047 EESCSAGAKNLQTDLNKPEDDNGITPLNDKDSEAVKPVNND 1087
+ A+ +Q +PE P +D DS A + D
Sbjct: 871 RDEDLVVAEQMQ----RPE------PQSDNDSSATCSADED 901
>UNIPROTKB|G3X7K5 [details] [associations]
symbol:NCOR2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050872 "white fat cell differentiation" evidence=IEA]
[GO:0045599 "negative regulation of fat cell differentiation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0042593 "glucose homeostasis" evidence=IEA]
[GO:0021846 "cell proliferation in forebrain" evidence=IEA]
[GO:0021537 "telencephalon development" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 GO:GO:0003714
GO:GO:0003007 GO:GO:0043565 GO:GO:0001701 GO:GO:0050872
GO:GO:0003682 GO:GO:0042593 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000122 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0045599
GO:GO:0016604 GO:GO:0021846 GO:GO:0021537 GO:GO:0000118
GeneTree:ENSGT00550000074554 OMA:MHHNAAT EMBL:DAAA02045216
EMBL:DAAA02045217 EMBL:DAAA02045218 EMBL:DAAA02045219
EMBL:DAAA02045220 EMBL:DAAA02045221 EMBL:DAAA02045222
EMBL:DAAA02045223 Ensembl:ENSBTAT00000034273 Uniprot:G3X7K5
Length = 2294
Score = 196 (74.1 bits), Expect = 1.8e-09, Sum P(4) = 1.8e-09
Identities = 63/273 (23%), Positives = 125/273 (45%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
L +I N++ A A +L+ L P+ + + + ++++ + +KK +L
Sbjct: 63 LVQIIYDENRKKAEAAHRILEGLGPQ--VELPLYNQPSDTRQYHENIKINQAMRKKLILY 120
Query: 591 FK---------ERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKH 641
FK E+ ++ W + + + R + K + +K
Sbjct: 121 FKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQ 180
Query: 642 RS--SIRSRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILDK 693
R R LS+ + +E+I+ S+ ++ K R +P ++ D
Sbjct: 181 RELQERMQRVGQRGSGLSMSAARSEHEVSEIIDGLSE--QENLEKQMRQLAVIPPMLYDA 238
Query: 694 KEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYK 753
++ +FI+ NGL++DP V K+R ++N W+ +E+E F +K K+F IASFL K
Sbjct: 239 -DQQRIKFINMNGLMDDPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERK 297
Query: 754 TTADCVEFYYKNHKSDCFEKLKKKHDFSKQGKT 786
T A+CV +YY K++ ++ L ++ + ++GK+
Sbjct: 298 TVAECVLYYYLTKKNENYKSLVRR-SYRRRGKS 329
Score = 63 (27.2 bits), Expect = 1.8e-09, Sum P(4) = 1.8e-09
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 955 YGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLI 990
+G+++S IAR + +++ QCK F+ +K LD I
Sbjct: 469 HGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNLDEI 504
Score = 44 (20.5 bits), Expect = 1.8e-09, Sum P(4) = 1.8e-09
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 1295 QHLSVHSIVNHVESPQILNGYP 1316
+HL+ + H+ P ++ GYP
Sbjct: 1424 RHLAPNPTYPHLYPPYLIRGYP 1445
Score = 42 (19.8 bits), Expect = 1.3e-08, Sum P(5) = 1.3e-08
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 1504 PAAFGGYPASSSKMEQQSLQAAVVKSNERHLNGVAVVPPR 1543
P GYP +++ +Q++ + S + H N + R
Sbjct: 1438 PYLIRGYPDTAALENRQTIINDYITSQQMHHNAATAMAQR 1477
Score = 42 (19.8 bits), Expect = 5.0e-07, Sum P(4) = 5.0e-07
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 881 SEAMSSCITSSVDPAEGQRDWRRQKADSVMRLPSTSDVTQN 921
S++ ++C VD EG D R + L TSD N
Sbjct: 702 SDSSATCSADEVDEPEGG-DKNRLLSPRPSLLTPTSDTRTN 741
Score = 41 (19.5 bits), Expect = 1.8e-09, Sum P(4) = 1.8e-09
Identities = 12/47 (25%), Positives = 20/47 (42%)
Query: 986 GLDLIHTGRGNVGPSVNDDANGGGSDTEDACVLETSSVNCSDKLGSK 1032
GL++ + G P+ + A SDTE T + + + G K
Sbjct: 535 GLEVDYAGSSKAQPNKDCAAVNNSSDTESVPSPRTEAAKDTGQNGPK 581
Score = 40 (19.1 bits), Expect = 4.4e-09, Sum P(4) = 4.4e-09
Identities = 39/206 (18%), Positives = 77/206 (37%)
Query: 1053 GAKNLQTDLNKPEDDNGITPLNDKDSEAVKPVNNDAFRTE--SRSFELESNNMNGMDNQS 1110
GA DL +P D + P + P + R+ S++ L S+ +G++ S
Sbjct: 1946 GASCPVLDLRRPPSDLYLPPPDHGTQARGSPHSEGGKRSPEPSKTSALGSSE-DGIEPVS 2004
Query: 1111 --ESVLDQKNAV-ELFKTAVRD-KVAEQGAVSVSAGEESDPCPSSSNAVEETNDVVAEAS 1166
E +++ + ++ RD + AE S S G S P P+ + + E+N + ++
Sbjct: 2005 PPEGMVEPGHPRGTMYPLLYRDGEQAEPRMGSKSPGNTSQP-PAFFSKLTESNSAMVKSK 2063
Query: 1167 TEGFGNGLERYQPMLLENSLNDVRDKICNVDACGESEIVQDSNTTGSAFDLYXXXXXXXX 1226
+ L + E ++ +I N+ A + ++ A +
Sbjct: 2064 KQEINKKLNTHNRNEPEYNIGQPGTEIFNMPAITGAGLM---TCRSQAVQEHASTNMGLE 2120
Query: 1227 XXXXXXXXKPPLISLPQWNSHPAAAS 1252
K + QW HP +A+
Sbjct: 2121 AIIR----KALMGKYDQWEEHPLSAN 2142
Score = 39 (18.8 bits), Expect = 1.3e-08, Sum P(5) = 1.3e-08
Identities = 30/144 (20%), Positives = 52/144 (36%)
Query: 1235 KPPLISLPQWNSHPAAASTQDSS-VIQCEKAFIQDRMSSTLEFQRSKDKSGHKSVVSDDY 1293
+P + + PQ HP DS+ + I + + +S
Sbjct: 837 EPRMQTAPQGRGHPLPLGLHDSARPVLPRPPTISNPPPLISSTKHPSVLERQMGAISQGM 896
Query: 1294 RQHLSVHSIVNHVESP--QILNGYPLPISTKK--EMNGDINCRQLSEVQSISKSDRNIDE 1349
L V H ++P I G PL + KK +G + QLS + + ++
Sbjct: 897 SVQLHV-PYSEHAKAPVGPIAMGLPLAMDPKKLTPFSG-VKQEQLSP-RGQAGPPESLGV 953
Query: 1350 PYLAQDCYLRKCN-SSMPHSSVTE 1372
P + LR + S+P S+T+
Sbjct: 954 PTAQETSVLRGTSLGSVPGGSITK 977
>CGD|CAL0003874 [details] [associations]
symbol:PGA55 species:5476 "Candida albicans" [GO:0009986
"cell surface" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0003874 GO:GO:0009986 EMBL:AACQ01000152 RefSeq:XP_712591.1
GeneID:3645784 KEGG:cal:CaO19.207 Uniprot:Q59SG9
Length = 1404
Score = 164 (62.8 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 161/879 (18%), Positives = 356/879 (40%)
Query: 244 ASPATPSSVACSSSPGVEEKAFGKAVSVDNDVSNLCGSPSIVSQNHREGFLFNLEKLDTN 303
+S ++ SS SSS V + +A S + S+ S S VS + L + E + ++
Sbjct: 95 SSSSSSSSTVSSSSSEVISSSSEEASSSEITSSSEISSSSEVSSSSE--VLSSSEIISSS 152
Query: 304 SIGNLGSSLVELLQYDDPSSVDSSFVRSTAMNKLLVWKGDILKTLEM--TETEIDSLENE 361
S + SS ++ + +S S + S++ +++ + + E+ + +E+ S +E
Sbjct: 153 S--EVVSSSSKVSSSSEATSSSSEIISSSS--EVVSSSSQVTSSSEVVSSSSEVVSSSSE 208
Query: 362 LKSLKSVLGSTSPCPVTS-ISLSVEDNANPFNKQGTVSNSIIRPAPLQIDCGDLSVENMP 420
+ S V+ S+S +S +S S E +++ Q T S+ I+ + V +
Sbjct: 209 VSSSSEVVSSSSEVSSSSEVSSSSEVSSS---SQVTSSSEIVSSSSEVSSSSSEVVSSSS 265
Query: 421 DCSHGLEEVHGNSK---DEDIDSPGTATSKFVEPSSFVKPVSPSNMLKNGESFGVLDTVH 477
+ S E V +S+ ++ S +S E SS + S S ++ + E V
Sbjct: 266 EVSSSSEVVSSSSEVSSSSEVSSSSEVSSSS-EVSSSSEVSSSSQVISSSEVVSSSSEVV 324
Query: 478 SSNTEVKCTMPGSSFGEVVAGASTCGDGDMILESKNDALISSNFSAYADGENMLCDMILG 537
SS++EV + SS EVV+ +S + S +SS+ + E I+
Sbjct: 325 SSSSEVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSE---VSSSSQVTSSSE------IVS 375
Query: 538 ANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLRFKERVLT 597
++ E+++ +SEV+ S+ +S + V S E + ++ E +
Sbjct: 376 SSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSE-VSSSSEVSSSSEVSSS 434
Query: 598 LKFKAFQHLWREDLRLLSIRKYRARSQK---KCELSLRTTYTGYQKHRSSIRSRFSSPAG 654
+ + + + S + + S + E+S + + + SS S S +
Sbjct: 435 SQVISSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSS--SEIVSSSS 492
Query: 655 NLSLVQTAEVINFTSKLLSDSQIKTYRNSLKMPALILDKKE-KMSSRFISSNGLVEDPCA 713
+S ++EV++ +S++ S S++ + + + + + E SS+ ISS+ +V
Sbjct: 493 EVSS-SSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEIVSSSSE 551
Query: 714 VEKERAMINPWTSE-EREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDCFE 772
V + + +SE V ++ +++S +++ + S E
Sbjct: 552 VSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISS--SEVVSSSSE 609
Query: 773 KLKKKHDFSKQGKTSTNTYLVTTGKRNRKMNAASLDILGEASEI-AAAAQVDGR--QXXX 829
+ + S + S+++ + ++ + + +S + +SEI +++++V +
Sbjct: 610 VVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVS 669
Query: 830 XXXXXXXXXXXXXXXXXXXXIIERSSSFDVIGGERETAAADVLAGICGSLSSEAMSSC-- 887
E SSS +V + ++++V+ S SSE +SS
Sbjct: 670 SSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVV-----SSSSEVVSSSSE 724
Query: 888 ITSSVDPAEGQRDWRRQKADSVMRLPSTSDVTQNVDD---DTCSDE--SCGEMDPSDWTD 942
++SS + + + S + S+S+VT + + + S E S E+ S
Sbjct: 725 VSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVTSSSSEIISSSSSSEVTSSSEVSSSSQAT 784
Query: 943 EEKSIFIQAVT--SYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLIHTGRGNVGPS 1000
S I + + S + + + CI + S + +++ + + S
Sbjct: 785 SSSSEIISSSSKVSSSSEITSSSECISSTSEVNSSSSEVVSSSSASSEVVSSSTECISSS 844
Query: 1001 ---VNDDANGGGSDTE----DACVLETSSV-NCSDKLGSKTDEELPSHVIHSNQEESCSA 1052
++ + S TE + V+ +S V +CS ++ S ++ + S + S+++ S S
Sbjct: 845 SEAISSSSQVTSSSTECISSSSEVISSSEVTSCSSEVVSSSETCISSKEMSSSEQISSSE 904
Query: 1053 GAKNLQTDLNKPEDDNGITPLNDKDSEAVKPVNNDAFRT 1091
+ ++K + + ++ SE V+ + T
Sbjct: 905 STSSCSEFVSKSSEHSSLSS-ESCPSEETSTVSETSSET 942
Score = 157 (60.3 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 150/870 (17%), Positives = 334/870 (38%)
Query: 322 SSVDSSFVRSTAMNKLLVWKGDILKTLEMTETEIDSLENELKSLKSVLGSTSPCPVTSIS 381
SS SS S++ ++++ + + E+T + S +E+ S VL S+ +S
Sbjct: 96 SSSSSSSTVSSSSSEVISSSSEEASSSEITSSSEISSSSEVSSSSEVLSSSEIISSSSEV 155
Query: 382 LSVEDNANPFNKQGTVSNSIIRPAPLQIDCGDLSVENMPDCSHGLEEVHGNSKDEDIDSP 441
+S + + + T S+S I + ++ V + + EV +S + S
Sbjct: 156 VSSSSKVSS-SSEATSSSSEIISSSSEVVSSSSQVTSSSEVVSSSSEVVSSSSEVSSSSE 214
Query: 442 GTATSKFVEPSSFVKP---VSPSNML-KNGESFGVLDTVHSSNTEV-KCTMPGSSFGEVV 496
++S V SS V VS S+ + + E V SS++EV + SS EVV
Sbjct: 215 VVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVV 274
Query: 497 AGASTCGDGDMILESKNDALISSNFSAYADGENMLCDMILGANKELANEASEVLKKLLPR 556
+ +S + S +SS+ + E ++ ++ E+ + +SEV+
Sbjct: 275 SSSSEVSSSSEVSSSSE---VSSSSEVSSSSEVSSSSQVISSS-EVVSSSSEVVS----- 325
Query: 557 DHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLRFKERVLTLKFKAFQHLWREDLRLLSI 616
S+ ++S + V + + ++ E + + + + + S
Sbjct: 326 --SSSEVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSS 383
Query: 617 RKYRARSQKKCELSLRTTYTGYQKHRSSIRSRFSSPAGNLSLVQTAEVINFTSKLLSDSQ 676
S + S + + SS S SS + S V ++ ++ +S+++S S+
Sbjct: 384 SSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSS-SSEVSSSSEVSSSSEVSSSSQVISSSE 442
Query: 677 IKTYRNSLKMPALILDKKEKMSSRF-ISSNGLVEDPCAVEKERAMINPWTSEEREIFVDK 735
+ + + + + ++ ++SS +SS+ V V +++ +S E +
Sbjct: 443 VVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVS--SSSEVSSSSSE 500
Query: 736 LATFGKDFRKIASFLNYKT-TADCVEFYYKNHKSDCFEKLKKKHDFSKQGKTSTNTYLVT 794
+ + + + ++ + + E + S + + S + S+++ V
Sbjct: 501 VVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVV 560
Query: 795 TGKRNRKMNAASLDILGEASEIAAAAQVDGR-QXXXXXXXXXXXXXXXXXXXXXXXIIER 853
+ + +++++S +++ +SE++++++V + E
Sbjct: 561 SS--SSEVSSSS-EVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEV 617
Query: 854 SSSFDVIGGERETAAADVLAGICGSLSSEAMSSC-ITSSVDPAEGQRDWRRQKADSVMRL 912
SSS +V +++++V + S SS+ SS I SS + S +
Sbjct: 618 SSSSEVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSS---EVVSSSSEV 674
Query: 913 PSTSDVTQNVDDDTCSDE--SCGEMDPSDWTDEEKSIFIQA--VTSYGKDFSMIARCIRT 968
S+S+V + + + S E S E+ S + + V S + S + +
Sbjct: 675 SSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSS 734
Query: 969 RSRDQCKVFFSKARKCLGLDLIHTGRGNVGPSVNDDANGGGSDTEDACVLETSS--VNCS 1026
S + ++ + + S + + + + +SS ++ S
Sbjct: 735 SEVSSSSEVSSSSEVSSSSEVTSSSSEIISSSSSSEVTSSSEVSSSSQATSSSSEIISSS 794
Query: 1027 DKLGSKTDEELPSHVIHSNQEESCSAGAKNLQTDLNKPEDDNGITPLNDKDSEAVKP--- 1083
K+ S ++ S I S E + S+ ++ + + E + T SEA+
Sbjct: 795 SKVSSSSEITSSSECISSTSEVN-SSSSEVVSSSSASSEVVSSSTECISSSSEAISSSSQ 853
Query: 1084 VNNDAFRTESRSFELESNNMNGMDNQSESVLDQKNAVELFKTAVRDKVAEQGAVS----- 1138
V + + S S E+ S++ SE V + + + + ++++ + S
Sbjct: 854 VTSSSTECISSSSEVISSS-EVTSCSSEVVSSSETCISSKEMSSSEQISSSESTSSCSEF 912
Query: 1139 VSAGEESDPCPSSSNAVEETNDVVAEASTE 1168
VS E S S EET+ V+E S+E
Sbjct: 913 VSKSSEHSSLSSESCPSEETS-TVSETSSE 941
Score = 151 (58.2 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 139/732 (18%), Positives = 293/732 (40%)
Query: 217 SSNAEPLQSLSSNLAEKSPRVMGFSDCASPATP---SSVACSSSPGVEEKAFGKAVSVDN 273
SS++E + S SS + S V S+ S ++ SS SSS V + + S +
Sbjct: 177 SSSSEVVSS-SSQVTSSSEVVSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVS 235
Query: 274 DVSNLCGSPSIVSQNHREGFLFNLEKLDTNSIGNLGSSLVELLQYDDPSSVDSSFVRSTA 333
S + S IVS + E + E + ++S + S +V SS SS ++
Sbjct: 236 SSSQVTSSSEIVSSSS-EVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSS 294
Query: 334 MNKLLVWKGDILKTLEM-TETEIDSLENELKSLKSVLGSTSPCPVTSISLSVEDNANPFN 392
+++ ++ + ++ + +E+ S +E+ S S + S+S S S V +++ +
Sbjct: 295 SSEVSS-SSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSE---VSSSSEVVSSSSEVS 350
Query: 393 KQGTVSNSIIRPAPLQIDCGDLSVENMPDCSHGLEEVHGNSKDEDIDSPGTATSKFVEPS 452
VS+S + Q+ V + + S EV +S + S ++S V S
Sbjct: 351 SSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSS 410
Query: 453 SFVKP---VSPSNMLKNGESFGVLDTVHSSNTEVKCTMPGSSFGEVVAGASTCGDGDMIL 509
S V VS S+ + + V SS+ V + SS EVV+ +S +
Sbjct: 411 SEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVS 470
Query: 510 ESKNDALISSNFSAYADGENMLCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANV 569
S +SS+ + E I+ ++ E+++ +SEV+ S+ +S + V
Sbjct: 471 SSSE---VSSSSQVTSSSE------IVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEV 521
Query: 570 FCCQNDSLVKEKFAKKKQLLRFKERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCEL 629
S E + Q++ E V + + ++S + S +
Sbjct: 522 SSSSEVSSSSE-VSSSSQVISSSEIV-----SSSSEVSSSSSEVVSSSSEVSSSSEVVSS 575
Query: 630 SLRTTYTGYQKHRSSIRSRFSSPAGNLSLVQTAEVINFTSKLLSDSQIKTYRNSLKMPAL 689
S + + S + S + + + ++EV++ +S++ S S++ + +
Sbjct: 576 SSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEV 635
Query: 690 ILDKKEKMSSRFISSNGLVEDPCAVEKERAMINPWTSE-EREIFVDKLATFGKDFRKIAS 748
+ SS+ SS+ +V V + + +SE V ++ +++S
Sbjct: 636 SSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSS 695
Query: 749 FLNYKTTADCVEFYYKNHKSDCFEKLKKKHDFSKQGKTSTNTYLVTTGKRNRKMN-AASL 807
+++ + S E + + S + S+++ + ++ + + ++S
Sbjct: 696 SSEVSSSSQVISS--SEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSS 753
Query: 808 DILGEASEI---AAAAQV-DGRQXXXXXXXXXXXXXXXXXXXXXXXIIERSSSFDVIGGE 863
++ +SEI +++++V + E +SS + I
Sbjct: 754 EVTSSSSEIISSSSSSEVTSSSEVSSSSQATSSSSEIISSSSKVSSSSEITSSSECISST 813
Query: 864 RE--TAAADVLAGICGSLSSEAMSS---CITSSVDPAEGQRDWRRQKADSVMRLPSTSDV 918
E +++++V++ S SSE +SS CI+SS +E + + S + S+S+V
Sbjct: 814 SEVNSSSSEVVSS--SSASSEVVSSSTECISSS---SEAISSSSQVTSSSTECISSSSEV 868
Query: 919 TQNVDDDTCSDE 930
+ + +CS E
Sbjct: 869 ISSSEVTSCSSE 880
Score = 141 (54.7 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 147/836 (17%), Positives = 320/836 (38%)
Query: 650 SSPAGNLSLVQTA--EVINFTSKLLSDSQIKTYRNSLKMPALILDKKEKMSSRFI--SSN 705
SS + + S V ++ EVI+ +S+ S S+I T + + + + E +SS I SS+
Sbjct: 95 SSSSSSSSTVSSSSSEVISSSSEEASSSEI-TSSSEISSSSEVSSSSEVLSSSEIISSSS 153
Query: 706 GLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCV----EF 761
+V V TS EI + +S ++++ V E
Sbjct: 154 EVVSSSSKVSSSSEA----TSSSSEIISSSSEVVSSSSQVTSSSEVVSSSSEVVSSSSEV 209
Query: 762 YYKNHKSDCFEKLKKKHDFSKQGKTSTNTYLVTTGK---RNRKMNAASLDILGEASEIAA 818
+ ++ + S + S+++ + ++ + + +++++S +++ +SE+++
Sbjct: 210 SSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSS 269
Query: 819 AAQVDGRQXXXXXXXXXXXXXXXXXXXXXXXIIERSSSFDVIGG-ERETAAADVLAGICG 877
+++V E SSS VI E +++++V++
Sbjct: 270 SSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSE 329
Query: 878 -SLSSEAMSSC--ITSSVDPAEGQRDWRRQKADSVMRLPSTSDVTQNVDDDTCSDESCGE 934
S SSE SS ++SS + + + S ++ S+S++ + + S S
Sbjct: 330 VSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSS-SSEVSSSSSEVV 388
Query: 935 MDPSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLIHTGR 994
S+ + + + + S + S + + + S S + + + + +
Sbjct: 389 SSSSEVSSSSEVVSSSSEVSSSSEVSSSSE-VSSSSEVSSSSEVSSSSQVISSSEVVSSS 447
Query: 995 GNVGPS--VNDDANGGGSDTEDACVLETSS---VNCSDKLGSKTDE--ELPSHVIHSNQE 1047
V S V ++ S +E + E SS V S ++ S + E S V+ S+ E
Sbjct: 448 SEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSE 507
Query: 1048 ESCSAGAKNLQTDLNKPEDDNGITPLNDKDSEAVKP--VNNDAFRTESRSFELESNNMNG 1105
S S+ + ++++ + + + ++ S+ + + + + S S E+ S++
Sbjct: 508 VSSSSEVVSSSSEVSSSSEVSSSSEVSSS-SQVISSSEIVSSSSEVSSSSSEVVSSSSE- 565
Query: 1106 MDNQSESVLDQKNAVELFKTAVRDKVAEQGAVSVSAGE---ESDPCPSSSNAVEETNDVV 1162
+ + SE V + + +V+ V +S+ E S SSS+ V +++V
Sbjct: 566 VSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQV-ISSSEVVSSSSEVVSSSSEVSSSSEVS 624
Query: 1163 A--EASTEGFGNGLERYQPMLLENSLNDVRDKICNVDACGESEIVQDSNTTGSAFDLYXX 1220
+ E S+ + S +++ V + SE+V S+ S+ ++
Sbjct: 625 SSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSS-SSSEVVSSSSEVSSSSEVVSS 683
Query: 1221 XXXXXXXXXXXXXXKPPLISLPQWNSHPAAASTQDSSVIQCEKAFIQDRMSSTLEFQRSK 1280
+ + S Q S S+ V + +SS+ E S
Sbjct: 684 SSEVSSSSEVSSSSE--VSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSS 741
Query: 1281 DKSGHKSVVSDDYRQHLSVHSIVNHVESPQILNGYPLPISTKKEMNGDINCRQLSEVQSI 1340
+ S S VS S I++ S ++ + + S++ + S+V S
Sbjct: 742 EVSS-SSEVSSSSEVTSSSSEIISSSSSSEVTSSSEVSSSSQATSSSSEIISSSSKVSSS 800
Query: 1341 SKSDRNIDEPYLAQDCYLRKCNSSMPHSSVTELPFLAENIEQTSDRRRAHSCSF----SD 1396
S+ + + ++ + +S + SS ++ + E S A S S S
Sbjct: 801 SEITSSSE--CISSTSEVNSSSSEVVSSSSASSEVVSSSTECISSSSEAISSSSQVTSSS 858
Query: 1397 TEKPSKNGDVKLFGKILSHPS---SSQKSAFSSHDNGENGHHHKQSSKASNLKFTA 1449
TE S + +V ++ S S SS ++ SS + + S +S +F +
Sbjct: 859 TECISSSSEVISSSEVTSCSSEVVSSSETCISSKEMSSSEQISSSESTSSCSEFVS 914
Score = 38 (18.4 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 1081 VKPVNNDAFRTESRSFELESNNMNGMDNQSESV 1113
V+ + N +S +E NG+ +QS++V
Sbjct: 1286 VEVIGNKVITKQSGKPIVEEQTTNGIVHQSDTV 1318
>UNIPROTKB|Q59SG9 [details] [associations]
symbol:PGA55 "Flocculin-like protein" species:237561
"Candida albicans SC5314" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0009986 "cell surface" evidence=ISS] CGD:CAL0003874
GO:GO:0009986 EMBL:AACQ01000152 RefSeq:XP_712591.1 GeneID:3645784
KEGG:cal:CaO19.207 Uniprot:Q59SG9
Length = 1404
Score = 164 (62.8 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 161/879 (18%), Positives = 356/879 (40%)
Query: 244 ASPATPSSVACSSSPGVEEKAFGKAVSVDNDVSNLCGSPSIVSQNHREGFLFNLEKLDTN 303
+S ++ SS SSS V + +A S + S+ S S VS + L + E + ++
Sbjct: 95 SSSSSSSSTVSSSSSEVISSSSEEASSSEITSSSEISSSSEVSSSSE--VLSSSEIISSS 152
Query: 304 SIGNLGSSLVELLQYDDPSSVDSSFVRSTAMNKLLVWKGDILKTLEM--TETEIDSLENE 361
S + SS ++ + +S S + S++ +++ + + E+ + +E+ S +E
Sbjct: 153 S--EVVSSSSKVSSSSEATSSSSEIISSSS--EVVSSSSQVTSSSEVVSSSSEVVSSSSE 208
Query: 362 LKSLKSVLGSTSPCPVTS-ISLSVEDNANPFNKQGTVSNSIIRPAPLQIDCGDLSVENMP 420
+ S V+ S+S +S +S S E +++ Q T S+ I+ + V +
Sbjct: 209 VSSSSEVVSSSSEVSSSSEVSSSSEVSSS---SQVTSSSEIVSSSSEVSSSSSEVVSSSS 265
Query: 421 DCSHGLEEVHGNSK---DEDIDSPGTATSKFVEPSSFVKPVSPSNMLKNGESFGVLDTVH 477
+ S E V +S+ ++ S +S E SS + S S ++ + E V
Sbjct: 266 EVSSSSEVVSSSSEVSSSSEVSSSSEVSSSS-EVSSSSEVSSSSQVISSSEVVSSSSEVV 324
Query: 478 SSNTEVKCTMPGSSFGEVVAGASTCGDGDMILESKNDALISSNFSAYADGENMLCDMILG 537
SS++EV + SS EVV+ +S + S +SS+ + E I+
Sbjct: 325 SSSSEVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSE---VSSSSQVTSSSE------IVS 375
Query: 538 ANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLRFKERVLT 597
++ E+++ +SEV+ S+ +S + V S E + ++ E +
Sbjct: 376 SSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSE-VSSSSEVSSSSEVSSS 434
Query: 598 LKFKAFQHLWREDLRLLSIRKYRARSQK---KCELSLRTTYTGYQKHRSSIRSRFSSPAG 654
+ + + + S + + S + E+S + + + SS S S +
Sbjct: 435 SQVISSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSS--SEIVSSSS 492
Query: 655 NLSLVQTAEVINFTSKLLSDSQIKTYRNSLKMPALILDKKE-KMSSRFISSNGLVEDPCA 713
+S ++EV++ +S++ S S++ + + + + + E SS+ ISS+ +V
Sbjct: 493 EVSS-SSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEIVSSSSE 551
Query: 714 VEKERAMINPWTSE-EREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDCFE 772
V + + +SE V ++ +++S +++ + S E
Sbjct: 552 VSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISS--SEVVSSSSE 609
Query: 773 KLKKKHDFSKQGKTSTNTYLVTTGKRNRKMNAASLDILGEASEI-AAAAQVDGR--QXXX 829
+ + S + S+++ + ++ + + +S + +SEI +++++V +
Sbjct: 610 VVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVS 669
Query: 830 XXXXXXXXXXXXXXXXXXXXIIERSSSFDVIGGERETAAADVLAGICGSLSSEAMSSC-- 887
E SSS +V + ++++V+ S SSE +SS
Sbjct: 670 SSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVV-----SSSSEVVSSSSE 724
Query: 888 ITSSVDPAEGQRDWRRQKADSVMRLPSTSDVTQNVDD---DTCSDE--SCGEMDPSDWTD 942
++SS + + + S + S+S+VT + + + S E S E+ S
Sbjct: 725 VSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVTSSSSEIISSSSSSEVTSSSEVSSSSQAT 784
Query: 943 EEKSIFIQAVT--SYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLIHTGRGNVGPS 1000
S I + + S + + + CI + S + +++ + + S
Sbjct: 785 SSSSEIISSSSKVSSSSEITSSSECISSTSEVNSSSSEVVSSSSASSEVVSSSTECISSS 844
Query: 1001 ---VNDDANGGGSDTE----DACVLETSSV-NCSDKLGSKTDEELPSHVIHSNQEESCSA 1052
++ + S TE + V+ +S V +CS ++ S ++ + S + S+++ S S
Sbjct: 845 SEAISSSSQVTSSSTECISSSSEVISSSEVTSCSSEVVSSSETCISSKEMSSSEQISSSE 904
Query: 1053 GAKNLQTDLNKPEDDNGITPLNDKDSEAVKPVNNDAFRT 1091
+ ++K + + ++ SE V+ + T
Sbjct: 905 STSSCSEFVSKSSEHSSLSS-ESCPSEETSTVSETSSET 942
Score = 157 (60.3 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 150/870 (17%), Positives = 334/870 (38%)
Query: 322 SSVDSSFVRSTAMNKLLVWKGDILKTLEMTETEIDSLENELKSLKSVLGSTSPCPVTSIS 381
SS SS S++ ++++ + + E+T + S +E+ S VL S+ +S
Sbjct: 96 SSSSSSSTVSSSSSEVISSSSEEASSSEITSSSEISSSSEVSSSSEVLSSSEIISSSSEV 155
Query: 382 LSVEDNANPFNKQGTVSNSIIRPAPLQIDCGDLSVENMPDCSHGLEEVHGNSKDEDIDSP 441
+S + + + T S+S I + ++ V + + EV +S + S
Sbjct: 156 VSSSSKVSS-SSEATSSSSEIISSSSEVVSSSSQVTSSSEVVSSSSEVVSSSSEVSSSSE 214
Query: 442 GTATSKFVEPSSFVKP---VSPSNML-KNGESFGVLDTVHSSNTEV-KCTMPGSSFGEVV 496
++S V SS V VS S+ + + E V SS++EV + SS EVV
Sbjct: 215 VVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVV 274
Query: 497 AGASTCGDGDMILESKNDALISSNFSAYADGENMLCDMILGANKELANEASEVLKKLLPR 556
+ +S + S +SS+ + E ++ ++ E+ + +SEV+
Sbjct: 275 SSSSEVSSSSEVSSSSE---VSSSSEVSSSSEVSSSSQVISSS-EVVSSSSEVVS----- 325
Query: 557 DHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLRFKERVLTLKFKAFQHLWREDLRLLSI 616
S+ ++S + V + + ++ E + + + + + S
Sbjct: 326 --SSSEVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSS 383
Query: 617 RKYRARSQKKCELSLRTTYTGYQKHRSSIRSRFSSPAGNLSLVQTAEVINFTSKLLSDSQ 676
S + S + + SS S SS + S V ++ ++ +S+++S S+
Sbjct: 384 SSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSS-SSEVSSSSEVSSSSEVSSSSQVISSSE 442
Query: 677 IKTYRNSLKMPALILDKKEKMSSRF-ISSNGLVEDPCAVEKERAMINPWTSEEREIFVDK 735
+ + + + + ++ ++SS +SS+ V V +++ +S E +
Sbjct: 443 VVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVS--SSSEVSSSSSE 500
Query: 736 LATFGKDFRKIASFLNYKT-TADCVEFYYKNHKSDCFEKLKKKHDFSKQGKTSTNTYLVT 794
+ + + + ++ + + E + S + + S + S+++ V
Sbjct: 501 VVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVV 560
Query: 795 TGKRNRKMNAASLDILGEASEIAAAAQVDGR-QXXXXXXXXXXXXXXXXXXXXXXXIIER 853
+ + +++++S +++ +SE++++++V + E
Sbjct: 561 SS--SSEVSSSS-EVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEV 617
Query: 854 SSSFDVIGGERETAAADVLAGICGSLSSEAMSSC-ITSSVDPAEGQRDWRRQKADSVMRL 912
SSS +V +++++V + S SS+ SS I SS + S +
Sbjct: 618 SSSSEVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSS---EVVSSSSEV 674
Query: 913 PSTSDVTQNVDDDTCSDE--SCGEMDPSDWTDEEKSIFIQA--VTSYGKDFSMIARCIRT 968
S+S+V + + + S E S E+ S + + V S + S + +
Sbjct: 675 SSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSS 734
Query: 969 RSRDQCKVFFSKARKCLGLDLIHTGRGNVGPSVNDDANGGGSDTEDACVLETSS--VNCS 1026
S + ++ + + S + + + + +SS ++ S
Sbjct: 735 SEVSSSSEVSSSSEVSSSSEVTSSSSEIISSSSSSEVTSSSEVSSSSQATSSSSEIISSS 794
Query: 1027 DKLGSKTDEELPSHVIHSNQEESCSAGAKNLQTDLNKPEDDNGITPLNDKDSEAVKP--- 1083
K+ S ++ S I S E + S+ ++ + + E + T SEA+
Sbjct: 795 SKVSSSSEITSSSECISSTSEVN-SSSSEVVSSSSASSEVVSSSTECISSSSEAISSSSQ 853
Query: 1084 VNNDAFRTESRSFELESNNMNGMDNQSESVLDQKNAVELFKTAVRDKVAEQGAVS----- 1138
V + + S S E+ S++ SE V + + + + ++++ + S
Sbjct: 854 VTSSSTECISSSSEVISSS-EVTSCSSEVVSSSETCISSKEMSSSEQISSSESTSSCSEF 912
Query: 1139 VSAGEESDPCPSSSNAVEETNDVVAEASTE 1168
VS E S S EET+ V+E S+E
Sbjct: 913 VSKSSEHSSLSSESCPSEETS-TVSETSSE 941
Score = 151 (58.2 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 139/732 (18%), Positives = 293/732 (40%)
Query: 217 SSNAEPLQSLSSNLAEKSPRVMGFSDCASPATP---SSVACSSSPGVEEKAFGKAVSVDN 273
SS++E + S SS + S V S+ S ++ SS SSS V + + S +
Sbjct: 177 SSSSEVVSS-SSQVTSSSEVVSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVS 235
Query: 274 DVSNLCGSPSIVSQNHREGFLFNLEKLDTNSIGNLGSSLVELLQYDDPSSVDSSFVRSTA 333
S + S IVS + E + E + ++S + S +V SS SS ++
Sbjct: 236 SSSQVTSSSEIVSSSS-EVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSS 294
Query: 334 MNKLLVWKGDILKTLEM-TETEIDSLENELKSLKSVLGSTSPCPVTSISLSVEDNANPFN 392
+++ ++ + ++ + +E+ S +E+ S S + S+S S S V +++ +
Sbjct: 295 SSEVSS-SSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSE---VSSSSEVVSSSSEVS 350
Query: 393 KQGTVSNSIIRPAPLQIDCGDLSVENMPDCSHGLEEVHGNSKDEDIDSPGTATSKFVEPS 452
VS+S + Q+ V + + S EV +S + S ++S V S
Sbjct: 351 SSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSS 410
Query: 453 SFVKP---VSPSNMLKNGESFGVLDTVHSSNTEVKCTMPGSSFGEVVAGASTCGDGDMIL 509
S V VS S+ + + V SS+ V + SS EVV+ +S +
Sbjct: 411 SEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVS 470
Query: 510 ESKNDALISSNFSAYADGENMLCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANV 569
S +SS+ + E I+ ++ E+++ +SEV+ S+ +S + V
Sbjct: 471 SSSE---VSSSSQVTSSSE------IVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEV 521
Query: 570 FCCQNDSLVKEKFAKKKQLLRFKERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCEL 629
S E + Q++ E V + + ++S + S +
Sbjct: 522 SSSSEVSSSSE-VSSSSQVISSSEIV-----SSSSEVSSSSSEVVSSSSEVSSSSEVVSS 575
Query: 630 SLRTTYTGYQKHRSSIRSRFSSPAGNLSLVQTAEVINFTSKLLSDSQIKTYRNSLKMPAL 689
S + + S + S + + + ++EV++ +S++ S S++ + +
Sbjct: 576 SSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEV 635
Query: 690 ILDKKEKMSSRFISSNGLVEDPCAVEKERAMINPWTSE-EREIFVDKLATFGKDFRKIAS 748
+ SS+ SS+ +V V + + +SE V ++ +++S
Sbjct: 636 SSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSS 695
Query: 749 FLNYKTTADCVEFYYKNHKSDCFEKLKKKHDFSKQGKTSTNTYLVTTGKRNRKMN-AASL 807
+++ + S E + + S + S+++ + ++ + + ++S
Sbjct: 696 SSEVSSSSQVISS--SEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSS 753
Query: 808 DILGEASEI---AAAAQV-DGRQXXXXXXXXXXXXXXXXXXXXXXXIIERSSSFDVIGGE 863
++ +SEI +++++V + E +SS + I
Sbjct: 754 EVTSSSSEIISSSSSSEVTSSSEVSSSSQATSSSSEIISSSSKVSSSSEITSSSECISST 813
Query: 864 RE--TAAADVLAGICGSLSSEAMSS---CITSSVDPAEGQRDWRRQKADSVMRLPSTSDV 918
E +++++V++ S SSE +SS CI+SS +E + + S + S+S+V
Sbjct: 814 SEVNSSSSEVVSS--SSASSEVVSSSTECISSS---SEAISSSSQVTSSSTECISSSSEV 868
Query: 919 TQNVDDDTCSDE 930
+ + +CS E
Sbjct: 869 ISSSEVTSCSSE 880
Score = 141 (54.7 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 147/836 (17%), Positives = 320/836 (38%)
Query: 650 SSPAGNLSLVQTA--EVINFTSKLLSDSQIKTYRNSLKMPALILDKKEKMSSRFI--SSN 705
SS + + S V ++ EVI+ +S+ S S+I T + + + + E +SS I SS+
Sbjct: 95 SSSSSSSSTVSSSSSEVISSSSEEASSSEI-TSSSEISSSSEVSSSSEVLSSSEIISSSS 153
Query: 706 GLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCV----EF 761
+V V TS EI + +S ++++ V E
Sbjct: 154 EVVSSSSKVSSSSEA----TSSSSEIISSSSEVVSSSSQVTSSSEVVSSSSEVVSSSSEV 209
Query: 762 YYKNHKSDCFEKLKKKHDFSKQGKTSTNTYLVTTGK---RNRKMNAASLDILGEASEIAA 818
+ ++ + S + S+++ + ++ + + +++++S +++ +SE+++
Sbjct: 210 SSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSS 269
Query: 819 AAQVDGRQXXXXXXXXXXXXXXXXXXXXXXXIIERSSSFDVIGG-ERETAAADVLAGICG 877
+++V E SSS VI E +++++V++
Sbjct: 270 SSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSE 329
Query: 878 -SLSSEAMSSC--ITSSVDPAEGQRDWRRQKADSVMRLPSTSDVTQNVDDDTCSDESCGE 934
S SSE SS ++SS + + + S ++ S+S++ + + S S
Sbjct: 330 VSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSS-SSEVSSSSSEVV 388
Query: 935 MDPSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLIHTGR 994
S+ + + + + S + S + + + S S + + + + +
Sbjct: 389 SSSSEVSSSSEVVSSSSEVSSSSEVSSSSE-VSSSSEVSSSSEVSSSSQVISSSEVVSSS 447
Query: 995 GNVGPS--VNDDANGGGSDTEDACVLETSS---VNCSDKLGSKTDE--ELPSHVIHSNQE 1047
V S V ++ S +E + E SS V S ++ S + E S V+ S+ E
Sbjct: 448 SEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSE 507
Query: 1048 ESCSAGAKNLQTDLNKPEDDNGITPLNDKDSEAVKP--VNNDAFRTESRSFELESNNMNG 1105
S S+ + ++++ + + + ++ S+ + + + + S S E+ S++
Sbjct: 508 VSSSSEVVSSSSEVSSSSEVSSSSEVSSS-SQVISSSEIVSSSSEVSSSSSEVVSSSSE- 565
Query: 1106 MDNQSESVLDQKNAVELFKTAVRDKVAEQGAVSVSAGE---ESDPCPSSSNAVEETNDVV 1162
+ + SE V + + +V+ V +S+ E S SSS+ V +++V
Sbjct: 566 VSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQV-ISSSEVVSSSSEVVSSSSEVSSSSEVS 624
Query: 1163 A--EASTEGFGNGLERYQPMLLENSLNDVRDKICNVDACGESEIVQDSNTTGSAFDLYXX 1220
+ E S+ + S +++ V + SE+V S+ S+ ++
Sbjct: 625 SSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSS-SSSEVVSSSSEVSSSSEVVSS 683
Query: 1221 XXXXXXXXXXXXXXKPPLISLPQWNSHPAAASTQDSSVIQCEKAFIQDRMSSTLEFQRSK 1280
+ + S Q S S+ V + +SS+ E S
Sbjct: 684 SSEVSSSSEVSSSSE--VSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSS 741
Query: 1281 DKSGHKSVVSDDYRQHLSVHSIVNHVESPQILNGYPLPISTKKEMNGDINCRQLSEVQSI 1340
+ S S VS S I++ S ++ + + S++ + S+V S
Sbjct: 742 EVSS-SSEVSSSSEVTSSSSEIISSSSSSEVTSSSEVSSSSQATSSSSEIISSSSKVSSS 800
Query: 1341 SKSDRNIDEPYLAQDCYLRKCNSSMPHSSVTELPFLAENIEQTSDRRRAHSCSF----SD 1396
S+ + + ++ + +S + SS ++ + E S A S S S
Sbjct: 801 SEITSSSE--CISSTSEVNSSSSEVVSSSSASSEVVSSSTECISSSSEAISSSSQVTSSS 858
Query: 1397 TEKPSKNGDVKLFGKILSHPS---SSQKSAFSSHDNGENGHHHKQSSKASNLKFTA 1449
TE S + +V ++ S S SS ++ SS + + S +S +F +
Sbjct: 859 TECISSSSEVISSSEVTSCSSEVVSSSETCISSKEMSSSEQISSSESTSSCSEFVS 914
Score = 38 (18.4 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 1081 VKPVNNDAFRTESRSFELESNNMNGMDNQSESV 1113
V+ + N +S +E NG+ +QS++V
Sbjct: 1286 VEVIGNKVITKQSGKPIVEEQTTNGIVHQSDTV 1318
>ZFIN|ZDB-GENE-050208-371 [details] [associations]
symbol:rcor3 "REST corepressor 3" species:7955
"Danio rerio" [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 ZFIN:ZDB-GENE-050208-371 GO:GO:0005634 GO:GO:0003677
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
GeneTree:ENSGT00550000074554 EMBL:AL954145 IPI:IPI00862288
Ensembl:ENSDART00000104498 Bgee:F1Q637 Uniprot:F1Q637
Length = 551
Score = 126 (49.4 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 50/162 (30%), Positives = 73/162 (45%)
Query: 886 SCITSSVDPAEGQRDW-----RRQKADSVMRLPSTSDVTQNVDD--DTCSDESCGEMDPS 938
SC +S+ + Q D +RQ+ + +L S + Q ++D D C + +
Sbjct: 278 SCSSSAANSVLRQLDMELVSLKRQQVQNAKQL--NSGLKQKIEDGIDELRLPECTQKINA 335
Query: 939 DWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLI----HTGR 994
WT +E+ + +Q V YGKDF IA I ++ Q K FF R+ LD + +
Sbjct: 336 RWTTDEQLLAVQGVRKYGKDFQAIADVIGNKTVGQVKNFFVNYRRRFNLDEVLQEWEAEQ 395
Query: 995 GNVGPSVNDDANGGGSDTEDACVLETSSVNCSDKLGSKTDEE 1036
G P+ D AN G ED +TS N S G TDEE
Sbjct: 396 GTRTPN-GDGANSG----EDG---KTS--NASS--GKSTDEE 425
Score = 73 (30.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKS 768
WT E++ +F + GK F +I L K+ + V++YY K+
Sbjct: 133 WTVEDKVLFEQAFSFHGKSFHRIQQMLPDKSISSLVKYYYSWKKT 177
>UNIPROTKB|F1NHX5 [details] [associations]
symbol:RCOR3 "REST corepressor 3" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR000949 PROSITE:PS51156
GeneTree:ENSGT00550000074554 OMA:QARFLQP EMBL:AADN02012068
IPI:IPI00821140 Ensembl:ENSGALT00000016048 ArrayExpress:F1NHX5
Uniprot:F1NHX5
Length = 486
Score = 115 (45.5 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 35/99 (35%), Positives = 49/99 (49%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLD-LIHTGRGNVG 998
WT EE+ + +Q V YGKDF IA I ++ Q K FF R+ L+ ++ G
Sbjct: 281 WTTEEQLLAVQGVRKYGKDFQAIADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQG 340
Query: 999 P-SVNDDANGGGSDTEDACVLETSSVNCSDKLGSKTDEE 1036
+ N DA+ G DT++ TS+V G TDEE
Sbjct: 341 TLASNGDASALGEDTKN-----TSNVPS----GKSTDEE 370
Score = 80 (33.2 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKS 768
WT E++ +F + GK F +I L KT A V++YY K+
Sbjct: 80 WTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKT 124
>FB|FBgn0261573 [details] [associations]
symbol:CoRest "CoRest" species:7227 "Drosophila melanogaster"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS;IDA] [GO:0017053
"transcriptional repressor complex" evidence=IPI] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003714
"transcription corepressor activity" evidence=IDA] [GO:2000619
"negative regulation of histone H4-K16 acetylation" evidence=IMP]
[GO:0007221 "positive regulation of transcription of Notch receptor
target" evidence=IMP] [GO:0061086 "negative regulation of histone
H3-K27 methylation" evidence=IMP] [GO:0045747 "positive regulation
of Notch signaling pathway" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 SMART:SM00717 GO:GO:0017053 GO:GO:0003714
GO:GO:0045892 GO:GO:0003677 EMBL:AE014298 GO:GO:0045747
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR000949 Pfam:PF01448
PROSITE:PS51156 GO:GO:0007221 eggNOG:NOG326181 EMBL:BT023817
EMBL:AY060226 EMBL:AY118507 RefSeq:NP_001014752.2
RefSeq:NP_001014753.1 RefSeq:NP_001014754.1 RefSeq:NP_001014755.1
RefSeq:NP_001014756.1 UniGene:Dm.4085 ProteinModelPortal:Q59E36
SMR:Q59E36 IntAct:Q59E36 MINT:MINT-1651349 STRING:Q59E36
PaxDb:Q59E36 PRIDE:Q59E36 GeneID:32941 KEGG:dme:Dmel_CG42687
UCSC:CG33525-RA CTD:32941 FlyBase:FBgn0261573 InParanoid:Q59E36
OrthoDB:EOG46DJJD PhylomeDB:Q59E36 GenomeRNAi:32941 NextBio:781152
GermOnline:CG33525 GO:GO:0061086 GO:GO:2000619 Uniprot:Q59E36
Length = 657
Score = 114 (45.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 63/289 (21%), Positives = 105/289 (36%)
Query: 883 AMSSCITSSVDPAEGQRDWRRQKADS---VMRLPSTSDVTQNVDD-----DTCSDESCGE 934
A++SC S+ AE +R A+ VM T NVDD + ES
Sbjct: 309 ALASCGNPSLYLAERERKLTALMAEKNRQVMEQLDKECETINVDDVLSKPAAANTESAQP 368
Query: 935 MDPSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLIHTGR 994
+ W +E + + A+ YGK+F IA+ + T++ + F+ R+ LD I
Sbjct: 369 RISARWLPDEIQVALLAIREYGKNFPTIAKVVATKTEAHVRTFYLNNRRRYNLDQI-VKE 427
Query: 995 GNVGPSVNDDANGGGSDTEDACVLETSSVNCSDKLGSKTDEELPSHVIHSNQE-ESCSAG 1053
G S + +G TE A + + + S Q E+ + G
Sbjct: 428 YEAGKS---EESGAEEQTEPAVDAAAAGAATASAPSAADSTSAASATADRKQSTENSNNG 484
Query: 1054 AKNLQTDLNKPEDDN----GITPLNDKDSEAVKPVNNDAFRTESRSFELESNNMNGMDNQ 1109
+ +Q L K ED L +EA V A T S ++ +
Sbjct: 485 VETMQESLPKKEDPKKPELAAAVLKIGVAEAADAVATVASSTASGVIGAATSASKPSTSA 544
Query: 1110 SESVLDQKN-AVELFKTAVRDKVAEQGAVSVSAGEESDPCPSSSNAVEE 1157
+ +++D+ + A V +A S + S P + + EE
Sbjct: 545 TITIIDESDTATNSSSDVVTTGLATSTGSSALSSTTSAPASKTQTSSEE 593
Score = 80 (33.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYK----NHKSDCFEKLKK 776
WT E++ +F GK F +I L K+ A V++YY H+S ++ +K
Sbjct: 181 WTIEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRHRSSAMDRQEK 237
>UNIPROTKB|Q9UKL0 [details] [associations]
symbol:RCOR1 "REST corepressor 1" species:9606 "Homo
sapiens" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0030218 "erythrocyte
differentiation" evidence=IEA] [GO:0045654 "positive regulation of
megakaryocyte differentiation" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IDA]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0070933 "histone H4 deacetylation" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007596 "blood
coagulation" evidence=TAS] Reactome:REACT_604 InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 GO:GO:0017053
GO:GO:0019048 GO:GO:0007596 GO:GO:0001078 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0044212 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
GO:GO:0070933 PDB:2V1D PDBsum:2V1D PDB:2UXN PDBsum:2UXN PDB:2IW5
PDB:2UXX PDB:2X0L PDB:2XAF PDB:2XAG PDB:2XAH PDB:2XAJ PDB:2XAQ
PDB:2XAS PDB:2Y48 PDBsum:2IW5 PDBsum:2UXX PDBsum:2X0L PDBsum:2XAF
PDBsum:2XAG PDBsum:2XAH PDBsum:2XAJ PDBsum:2XAQ PDBsum:2XAS
PDBsum:2Y48 EMBL:AF155595 EMBL:BC051003 EMBL:BC064495 EMBL:D31888
IPI:IPI00008531 RefSeq:NP_055971.2 UniGene:Hs.510521
ProteinModelPortal:Q9UKL0 SMR:Q9UKL0 DIP:DIP-35263N IntAct:Q9UKL0
MINT:MINT-3081566 STRING:Q9UKL0 PhosphoSite:Q9UKL0 DMDM:74762776
PaxDb:Q9UKL0 PeptideAtlas:Q9UKL0 PRIDE:Q9UKL0 DNASU:23186
Ensembl:ENST00000570597 GeneID:23186 KEGG:hsa:23186 UCSC:uc001ymb.3
CTD:23186 GeneCards:GC14P103059 HGNC:HGNC:17441 HPA:CAB001956
MIM:607675 neXtProt:NX_Q9UKL0 PharmGKB:PA34305 eggNOG:NOG326181
HOGENOM:HOG000065784 HOVERGEN:HBG079800 InParanoid:Q9UKL0 KO:K11829
OMA:TVPQIKK OrthoDB:EOG49ZXPF PhylomeDB:Q9UKL0
EvolutionaryTrace:Q9UKL0 GenomeRNAi:23186 NextBio:44655 Bgee:Q9UKL0
CleanEx:HS_RCOR1 Genevestigator:Q9UKL0 Uniprot:Q9UKL0
Length = 482
Score = 94 (38.1 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLD 988
WT EE+ + +QA+ YG+DF I+ I +S Q K FF R+ +D
Sbjct: 383 WTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVNYRRRFNID 431
Score = 80 (33.2 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDCFEKLKKKH 778
WT E++ +F + GK F +I L K+ A V+FYY K+ + +H
Sbjct: 192 WTVEDKVLFEQAFSFHGKTFHRIQQMLPDKSIASLVKFYYSWKKTRTKTSVMDRH 246
Score = 59 (25.8 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 204 PDVSGNKDGVFNFSSNAEPLQ-SLSSNLAEKSPRVMGFSDCA-SPATPSSVACSSSPGV- 260
P+VSG + G N +++A S +++ A SP S A S A+ ++ + +++P
Sbjct: 6 PEVSGKRRGRNNAAASASAAAASAAASAACASPAATAASGAAASSASAAAASAAAAPNNG 65
Query: 261 EEKAFGKAVSVDNDVSN 277
+ K+ A N SN
Sbjct: 66 QNKSLAAAAPNGNSSSN 82
>UNIPROTKB|F1MYQ0 [details] [associations]
symbol:RCOR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
GeneTree:ENSGT00550000074554 CTD:55758 OMA:QARFLQP
EMBL:DAAA02043785 EMBL:DAAA02043786 IPI:IPI00999623
RefSeq:NP_001179662.1 UniGene:Bt.105521 Ensembl:ENSBTAT00000009355
GeneID:532635 KEGG:bta:532635 NextBio:20875755 Uniprot:F1MYQ0
Length = 495
Score = 108 (43.1 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 34/99 (34%), Positives = 47/99 (47%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLD-LIHTGRGNVG 998
WT EE+ + +Q V YGKDF IA I ++ Q K FF R+ L+ ++ G
Sbjct: 290 WTTEEQLLAVQGVRKYGKDFQAIADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQG 349
Query: 999 PSV-NDDANGGGSDTEDACVLETSSVNCSDKLGSKTDEE 1036
N DA+ G +T+ A S+V G TDEE
Sbjct: 350 TQASNGDASTLGEETKSA-----SNVPS----GKSTDEE 379
Score = 80 (33.2 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKS 768
WT E++ +F + GK F +I L KT A V++YY K+
Sbjct: 89 WTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKT 133
>UNIPROTKB|Q9P2K3 [details] [associations]
symbol:RCOR3 "REST corepressor 3" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
eggNOG:NOG326181 HOVERGEN:HBG079800 CTD:55758 EMBL:AB037764
EMBL:AK131312 EMBL:AK302664 EMBL:AK001738 EMBL:AL590101
EMBL:AL611964 EMBL:BC031608 IPI:IPI00164550 IPI:IPI00903300
IPI:IPI00914887 IPI:IPI00914919 RefSeq:NP_001129695.1
RefSeq:NP_001129696.2 RefSeq:NP_001129697.1 RefSeq:NP_060724.1
UniGene:Hs.356399 ProteinModelPortal:Q9P2K3 SMR:Q9P2K3
IntAct:Q9P2K3 MINT:MINT-1447820 PhosphoSite:Q9P2K3 DMDM:90103520
PaxDb:Q9P2K3 PRIDE:Q9P2K3 Ensembl:ENST00000367005
Ensembl:ENST00000367006 Ensembl:ENST00000419091
Ensembl:ENST00000452621 GeneID:55758 KEGG:hsa:55758 UCSC:uc001hie.3
UCSC:uc001hif.3 UCSC:uc001hig.3 UCSC:uc010psw.2
GeneCards:GC01P211433 HGNC:HGNC:25594 HPA:HPA007413
neXtProt:NX_Q9P2K3 PharmGKB:PA134917623 InParanoid:Q9P2K3
OMA:QARFLQP OrthoDB:EOG4QRH43 ChiTaRS:RCOR3 GenomeRNAi:55758
NextBio:60771 ArrayExpress:Q9P2K3 Bgee:Q9P2K3 CleanEx:HS_RCOR3
Genevestigator:Q9P2K3 GermOnline:ENSG00000117625 Uniprot:Q9P2K3
Length = 495
Score = 108 (43.1 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 34/99 (34%), Positives = 47/99 (47%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLD-LIHTGRGNVG 998
WT EE+ + +Q V YGKDF IA I ++ Q K FF R+ L+ ++ G
Sbjct: 290 WTTEEQLLAVQGVRKYGKDFQAIADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQG 349
Query: 999 PSV-NDDANGGGSDTEDACVLETSSVNCSDKLGSKTDEE 1036
N DA+ G +T+ A S+V G TDEE
Sbjct: 350 TQASNGDASTLGEETKSA-----SNVPS----GKSTDEE 379
Score = 80 (33.2 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKS 768
WT E++ +F + GK F +I L KT A V++YY K+
Sbjct: 89 WTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKT 133
>UNIPROTKB|J3KN32 [details] [associations]
symbol:RCOR1 "REST corepressor 1" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0005634 EMBL:CH471061 GO:GO:0003677
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
RefSeq:NP_055971.2 UniGene:Hs.510521 GeneID:23186 KEGG:hsa:23186
CTD:23186 HGNC:HGNC:17441 KO:K11829 EMBL:AL136293 EMBL:AL132801
ProteinModelPortal:J3KN32 Ensembl:ENST00000262241 Uniprot:J3KN32
Length = 485
Score = 94 (38.1 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLD 988
WT EE+ + +QA+ YG+DF I+ I +S Q K FF R+ +D
Sbjct: 386 WTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVNYRRRFNID 434
Score = 80 (33.2 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDCFEKLKKKH 778
WT E++ +F + GK F +I L K+ A V+FYY K+ + +H
Sbjct: 195 WTVEDKVLFEQAFSFHGKTFHRIQQMLPDKSIASLVKFYYSWKKTRTKTSVMDRH 249
Score = 59 (25.8 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 204 PDVSGNKDGVFNFSSNAEPLQ-SLSSNLAEKSPRVMGFSDCA-SPATPSSVACSSSPGV- 260
P+VSG + G N +++A S +++ A SP S A S A+ ++ + +++P
Sbjct: 9 PEVSGKRRGRNNAAASASAAAASAAASAACASPAATAASGAAASSASAAAASAAAAPNNG 68
Query: 261 EEKAFGKAVSVDNDVSN 277
+ K+ A N SN
Sbjct: 69 QNKSLAAAAPNGNSSSN 85
>UNIPROTKB|C9J7T7 [details] [associations]
symbol:NCOR2 "Nuclear receptor corepressor 2" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
HOGENOM:HOG000113746 EMBL:AC069261 EMBL:AC073916 HGNC:HGNC:7673
ChiTaRS:NCOR2 EMBL:AC073592 IPI:IPI00952657
ProteinModelPortal:C9J7T7 SMR:C9J7T7 STRING:C9J7T7 PRIDE:C9J7T7
Ensembl:ENST00000404121 OrthoDB:EOG4S4PF9 ArrayExpress:C9J7T7
Bgee:C9J7T7 Uniprot:C9J7T7
Length = 2075
Score = 121 (47.7 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 23/63 (36%), Positives = 40/63 (63%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDCFEKLKKKHDFSKQ 783
W+ +E+E F +K K+F IASFL KT A+CV +YY K++ ++ L ++ + ++
Sbjct: 2 WSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYKSLVRR-SYRRR 60
Query: 784 GKT 786
GK+
Sbjct: 61 GKS 63
Score = 90 (36.7 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 35/146 (23%), Positives = 66/146 (45%)
Query: 936 DPSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLD-LIHTGR 994
+ S WT+EE + + +G+++S IAR + +++ QCK F+ +K LD ++ +
Sbjct: 181 ESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNLDEILQQHK 240
Query: 995 GNVGPSVN---DDANGGGSDTEDAC---VLETSSVNCSDKLGSKTD--EELPSHVIHSNQ 1046
+ N + +E+A V+E + S G++ + EE + V +S+
Sbjct: 241 LKMEKERNARRKKKKAPAAASEEAAFPPVVEDEEMEASGVSGNEEEMVEEAEATVNNSSD 300
Query: 1047 EESCSAGAKNLQTDLNKPEDDNGITP 1072
ES + T+ K NG P
Sbjct: 301 TESIPSP----HTEAAKDTGQNGPKP 322
Score = 44 (20.5 bits), Expect = 0.00021, Sum P(4) = 0.00021
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 1295 QHLSVHSIVNHVESPQILNGYP 1316
+HL+ + H+ P ++ GYP
Sbjct: 1214 RHLAPNPTYPHLYPPYLIRGYP 1235
Score = 42 (19.8 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 1504 PAAFGGYPASSSKMEQQSLQAAVVKSNERHLNGVAVVPPR 1543
P GYP +++ +Q++ + S + H N + R
Sbjct: 1228 PYLIRGYPDTAALENRQTIINDYITSQQMHHNAATAMAQR 1267
Score = 37 (18.1 bits), Expect = 0.00021, Sum P(4) = 0.00021
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 1500 LAKYPAAFGGYPASS 1514
LAK PA G PASS
Sbjct: 1518 LAKPPARSGLEPASS 1532
>UNIPROTKB|E2RRB8 [details] [associations]
symbol:RCOR3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
GeneTree:ENSGT00550000074554 CTD:55758 OMA:QARFLQP
EMBL:AAEX03005086 RefSeq:XP_537141.4 ProteinModelPortal:E2RRB8
PRIDE:E2RRB8 Ensembl:ENSCAFT00000019235 GeneID:480018
KEGG:cfa:480018 NextBio:20855111 Uniprot:E2RRB8
Length = 552
Score = 108 (43.1 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 34/99 (34%), Positives = 47/99 (47%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLD-LIHTGRGNVG 998
WT EE+ + +Q V YGKDF IA I ++ Q K FF R+ L+ ++ G
Sbjct: 347 WTTEEQLLAVQGVRKYGKDFQAIADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQG 406
Query: 999 PSV-NDDANGGGSDTEDACVLETSSVNCSDKLGSKTDEE 1036
N DA+ G +T+ A S+V G TDEE
Sbjct: 407 TQASNGDASTLGEETKSA-----SNVPS----GKSTDEE 436
Score = 80 (33.2 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKS 768
WT E++ +F + GK F +I L KT A V++YY K+
Sbjct: 146 WTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYYSWKKT 190
>MGI|MGI:106340 [details] [associations]
symbol:Rcor1 "REST corepressor 1" species:10090 "Mus
musculus" [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=ISO] [GO:0030218 "erythrocyte differentiation"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045654 "positive regulation of
megakaryocyte differentiation" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070933 "histone H4 deacetylation" evidence=ISO]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
MGI:MGI:106340 GO:GO:0017053 GO:GO:0001078 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0044212 GO:GO:0030218
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0045654 InterPro:IPR000949
Pfam:PF01448 PROSITE:PS51156 GO:GO:0070933
GeneTree:ENSGT00550000074554 CTD:23186 eggNOG:NOG326181
HOGENOM:HOG000065784 HOVERGEN:HBG079800 KO:K11829 EMBL:AK077445
EMBL:AK133352 EMBL:BY729958 EMBL:BC042731 EMBL:AB093210
IPI:IPI00265217 RefSeq:NP_932140.1 UniGene:Mm.23808
ProteinModelPortal:Q8CFE3 SMR:Q8CFE3 DIP:DIP-48899N IntAct:Q8CFE3
STRING:Q8CFE3 PhosphoSite:Q8CFE3 PaxDb:Q8CFE3 PRIDE:Q8CFE3
Ensembl:ENSMUST00000116388 GeneID:217864 KEGG:mmu:217864
UCSC:uc007pck.1 InParanoid:Q8CFE3 ChiTaRS:RCOR1 NextBio:376067
Bgee:Q8CFE3 CleanEx:MM_RCOR1 Genevestigator:Q8CFE3
GermOnline:ENSMUSG00000037896 Uniprot:Q8CFE3
Length = 477
Score = 95 (38.5 bits), Expect = 6.3e-05, Sum P(3) = 6.3e-05
Identities = 23/69 (33%), Positives = 35/69 (50%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLD-LIHTGRGNVG 998
WT EE+ + +QA+ YG+DF I+ I +S Q K FF R+ +D ++ G
Sbjct: 377 WTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVNYRRRFNIDEVLQEWEAEHG 436
Query: 999 PSVNDDANG 1007
D+ NG
Sbjct: 437 ---KDETNG 442
Score = 80 (33.2 bits), Expect = 6.3e-05, Sum P(3) = 6.3e-05
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDCFEKLKKKH 778
WT E++ +F + GK F +I L K+ A V+FYY K+ + +H
Sbjct: 186 WTVEDKVLFEQAFSFHGKTFHRIQQMLPDKSIASLVKFYYSWKKTRTKTSVMDRH 240
Score = 54 (24.1 bits), Expect = 6.3e-05, Sum P(3) = 6.3e-05
Identities = 22/74 (29%), Positives = 31/74 (41%)
Query: 204 PDVSGNKDGVFNFSSNAEPLQSLSSNLAEKSPRVMGFSDCASPATPSSVACSSSPGVEEK 263
P+VSG + G +S A S +S A S + AS A +S A + G + K
Sbjct: 6 PEVSGKRRGRNTAASAASAAASAAS--AAASAAASAGTXSASAAAAASAAAXPNNG-QNK 62
Query: 264 AFGKAVSVDNDVSN 277
+ A N SN
Sbjct: 63 SLAAAAPNGNSGSN 76
>ZFIN|ZDB-GENE-040426-1812 [details] [associations]
symbol:rcor2 "REST corepressor 2" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 ZFIN:ZDB-GENE-040426-1812 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
GeneTree:ENSGT00550000074554 eggNOG:NOG326181 HOGENOM:HOG000065784
HOVERGEN:HBG079800 EMBL:BC065331 IPI:IPI00499380 RefSeq:NP_991201.1
UniGene:Dr.15573 ProteinModelPortal:Q6P116 SMR:Q6P116 PRIDE:Q6P116
Ensembl:ENSDART00000002961 GeneID:402934 KEGG:dre:402934 CTD:283248
InParanoid:Q6P116 OMA:GASEEHE OrthoDB:EOG4N30P7 NextBio:20816745
Bgee:Q6P116 Uniprot:Q6P116
Length = 536
Score = 115 (45.5 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 38/129 (29%), Positives = 59/129 (45%)
Query: 909 VMRLPSTSDVTQNVDDDTCSDESCGEMDP---SDWTDEEKSIFIQAVTSYGKDFSMIARC 965
V ++ T+ V +N D D E + S WT EE+ + +QAV YGKDF+ IA
Sbjct: 299 VQKIKQTNSVLRNNLGDGIEDMRPREPNQKINSRWTTEEQLLAVQAVRRYGKDFAAIADV 358
Query: 966 IRTRSRDQCKVFFSKARKCLGLDLI-------HTGRGNVGPSVNDDANGGGSDTEDACVL 1018
I ++ Q FF R+ L+ + +G+ G +VN + NG +D +
Sbjct: 359 IGNKTVAQVSSFFVSYRRRFNLEEVLREWQAEQEVQGSSGRTVNTELNGSAELEDDEVKM 418
Query: 1019 ETSSVNCSD 1027
+ S SD
Sbjct: 419 DGISPPHSD 427
Score = 70 (29.7 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKS 768
WT E++ +F + GK F +I L K V++YY K+
Sbjct: 129 WTVEDKVLFEQAFSFHGKSFHRIQQMLPDKMITSLVKYYYSWKKT 173
>UNIPROTKB|F1RFN3 [details] [associations]
symbol:LOC733643 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GeneTree:ENSGT00550000074554 OMA:MHHNAAT
EMBL:AEMK01107266 EMBL:CT737269 EMBL:CU468470
Ensembl:ENSSSCT00000010703 ArrayExpress:F1RFN3 Uniprot:F1RFN3
Length = 2042
Score = 121 (47.7 bits), Expect = 9.6e-05, Sum P(5) = 9.6e-05
Identities = 23/63 (36%), Positives = 40/63 (63%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDCFEKLKKKHDFSKQ 783
W+ +E+E F +K K+F IASFL KT A+CV +YY K++ ++ L ++ + ++
Sbjct: 2 WSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYKSLVRR-SYRRR 60
Query: 784 GKT 786
GK+
Sbjct: 61 GKS 63
Score = 94 (38.1 bits), Expect = 9.6e-05, Sum P(5) = 9.6e-05
Identities = 23/89 (25%), Positives = 46/89 (51%)
Query: 903 RQKADSVMRLPSTSDVTQNVDDDTCSDESCGEMDPSD-WTDEEKSIFIQAVTSYGKDFSM 961
R+K + + ++ + V ++ + EM+ S WT+EE + + +G+++S
Sbjct: 144 RRKGRITRSMANEANSEETVTPQQSAELASMEMNESSRWTEEEMETAKKGLLEHGRNWSA 203
Query: 962 IARCIRTRSRDQCKVFFSKARKCLGLDLI 990
IAR + +++ QCK F+ +K LD I
Sbjct: 204 IARMVGSKTVSQCKNFYFNYKKRQNLDEI 232
Score = 46 (21.3 bits), Expect = 9.6e-05, Sum P(5) = 9.6e-05
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 1121 ELFKTAVRDKVAEQGAVSVSAGEES--DPCPSSSNAVEE 1157
E K+ +++ AE+G V AG E+ + P + VE+
Sbjct: 419 EPVKSECKEEAAEEGPDKVKAGTEAVAEAAPEGALKVEK 457
Score = 44 (20.5 bits), Expect = 0.00017, Sum P(6) = 0.00017
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 1295 QHLSVHSIVNHVESPQILNGYP 1316
+HL+ + H+ P ++ GYP
Sbjct: 1226 RHLAPNPTYPHLYPPYLIRGYP 1247
Score = 42 (19.8 bits), Expect = 9.6e-05, Sum P(5) = 9.6e-05
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 1504 PAAFGGYPASSSKMEQQSLQAAVVKSNERHLNGVAVVPPR 1543
P GYP +++ +Q++ + S + H N + R
Sbjct: 1240 PYLIRGYPDTAALENRQTIINDYITSQQMHHNAATAMAQR 1279
Score = 38 (18.4 bits), Expect = 0.00017, Sum P(6) = 0.00017
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 1482 DGSKIQTGFSSLPDSA-ILLAKYPAAFGGYPASS 1514
+ S++ S D+ LAK PA G PASS
Sbjct: 1512 EASRVARPERSRADAGHTFLAKPPARAGLEPASS 1545
Score = 38 (18.4 bits), Expect = 0.00028, Sum P(5) = 0.00028
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 1058 QTDLNKPEDDNGITPLNDKDSEAVKPVNNDAFRTESR 1094
Q N P + +P+ + EA KPV AF E +
Sbjct: 577 QQPSNSPRGKSR-SPVPPAEKEAEKPVFFPAFVAEGQ 612
Score = 37 (18.1 bits), Expect = 9.6e-05, Sum P(5) = 9.6e-05
Identities = 12/46 (26%), Positives = 18/46 (39%)
Query: 1034 DEELPSHVIHSNQEESCSAGAKNLQTDLNKPEDDNGITPLNDKDSE 1079
+EE + EE + A+ L D+ K E+ P SE
Sbjct: 379 EEEAEAAPSAEEGEEQKPSVAQELAADVGKTEEPGDTPPSEPVKSE 424
>SGD|S000001800 [details] [associations]
symbol:SRP40 "Nucleolar serine-rich protein" species:4932
"Saccharomyces cerevisiae" [GO:0003674 "molecular_function"
evidence=ND] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IDA] SGD:S000001800
Pfam:PF05022 GO:GO:0005730 GO:GO:0006913 EMBL:BK006944 EMBL:X73541
GeneTree:ENSGT00700000104548 eggNOG:NOG318801 InterPro:IPR007718
RefSeq:NP_013018.3 GeneID:853967 KEGG:sce:YKR092C KO:K02927
RefSeq:NP_013020.3 GeneID:853969 KEGG:sce:YKR094C EMBL:L11275
EMBL:Z28317 PIR:S38170 ProteinModelPortal:P32583 DIP:DIP-2115N
IntAct:P32583 MINT:MINT-472548 STRING:P32583 PaxDb:P32583
EnsemblFungi:YKR092C CYGD:YKR092c OMA:DAXESAR OrthoDB:EOG4M68TB
NextBio:975404 Genevestigator:P32583 GermOnline:YKR092C
Uniprot:P32583
Length = 406
Score = 130 (50.8 bits), Expect = 0.00012, P = 0.00012
Identities = 73/327 (22%), Positives = 130/327 (39%)
Query: 878 SLSSEAMSSCITSSVDPAEGQRDWRRQKADSVMRLPSTSDVTQNVDDDTCSDESCGEMDP 937
S SS + SS +SS + + S S+SD + + D ++ S S
Sbjct: 27 SSSSSSSSSSSSSSSSSSSSSSSGESSSSSSSSSSSSSSDSSDSSDSESSSSSSSSSSSS 86
Query: 938 SDWTDEEKSIFIQAVTSYGKDFSMIAR---CIRTRSRDQCKVFFSKARKCLGLDLIHTGR 994
S +D E S + +S S + + S D+ K +AR+ D T +
Sbjct: 87 SSSSDSESSSESDSSSSGSSSSSSSSSDESSSESESEDETK---KRARESDNEDAKETKK 143
Query: 995 GNVGP----SVNDDANGGGSDTEDACVLET---SSVNCSDKLGSKTDEELPSHVIHSNQE 1047
P S ++G S +E E+ SS + S S++D E S S+
Sbjct: 144 AKTEPESSSSSESSSSGSSSSSESESGSESDSDSSSSSSSSSDSESDSESDSQSSSSSSS 203
Query: 1048 ESCSAGAKNLQTDLNKPEDDNGITPLNDKDSEAVKPVNNDAFRT----ESRSFELESNNM 1103
S+ + + +D + D + + + DS++ ++D+ + S S + S+
Sbjct: 204 SDSSSDSDSSSSDSSSDSDSSSSSSSSSSDSDSDSDSSSDSDSSGSSDSSSSSDSSSDES 263
Query: 1104 NGMDNQ-SESVLDQKNAVEL-FKTAVRDKV-AEQGAVSVSAGEESDPCPSSSNAVEETND 1160
D+ S+S D ++ EL K A D+ AE+ S ES P SSS++ + N
Sbjct: 264 TSSDSSDSDSDSDSGSSSELETKEATADESKAEETPAS---SNESTPSASSSSSANKLN- 319
Query: 1161 VVAEASTEGFGNGLERYQPMLLENSLN 1187
A T+ G ++ + + +N
Sbjct: 320 --IPAGTDEIKEGQRKHFSRVDRSKIN 344
>UNIPROTKB|Q8N108 [details] [associations]
symbol:MIER1 "Mesoderm induction early response protein 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IMP] [GO:0004871
"signal transducer activity" evidence=IMP] [GO:0017053
"transcriptional repressor complex" evidence=IDA] [GO:0031937
"positive regulation of chromatin silencing" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007165 "signal
transduction" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001005
InterPro:IPR009057 SMART:SM00717 GO:GO:0005737 GO:GO:0017053
GO:GO:0003677 EMBL:CH471059 GO:GO:0043123 GO:GO:0006351
GO:GO:0003682 SUPFAM:SSF46689 GO:GO:0004871 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
GO:GO:0031937 CTD:57708 eggNOG:NOG327673 HOGENOM:HOG000015798
HOVERGEN:HBG052923 OrthoDB:EOG4KD6MD EMBL:AF515446 EMBL:AF515447
EMBL:AF515448 EMBL:AY124186 EMBL:AY124187 EMBL:AY124188
EMBL:AY124189 EMBL:AY124190 EMBL:AY124191 EMBL:AY124192
EMBL:AY124193 EMBL:AY124194 EMBL:AK074990 EMBL:AK302061
EMBL:AL831987 EMBL:CR627441 EMBL:AL139216 EMBL:AL500525
EMBL:BC017423 EMBL:BC108726 EMBL:BC125217 EMBL:BC125218
EMBL:AB046830 IPI:IPI00477825 IPI:IPI00478280 IPI:IPI00479032
IPI:IPI00640919 IPI:IPI00646985 IPI:IPI00655630 IPI:IPI00655783
IPI:IPI00655845 IPI:IPI00656079 IPI:IPI00656089
RefSeq:NP_001071168.2 RefSeq:NP_001071169.1 RefSeq:NP_001071170.2
RefSeq:NP_001071171.2 RefSeq:NP_001071172.1 RefSeq:NP_001139582.1
RefSeq:NP_001139583.1 RefSeq:NP_001139584.1 RefSeq:NP_001139585.1
RefSeq:NP_065999.2 UniGene:Hs.605432 ProteinModelPortal:Q8N108
SMR:Q8N108 IntAct:Q8N108 MINT:MINT-4534304 STRING:Q8N108
PhosphoSite:Q8N108 DMDM:74750876 PaxDb:Q8N108 PRIDE:Q8N108
Ensembl:ENST00000355356 Ensembl:ENST00000355977
Ensembl:ENST00000357692 Ensembl:ENST00000371014
Ensembl:ENST00000371016 Ensembl:ENST00000371018
Ensembl:ENST00000401041 Ensembl:ENST00000401042 GeneID:57708
KEGG:hsa:57708 UCSC:uc001ddf.2 UCSC:uc001ddg.2 UCSC:uc001ddi.2
UCSC:uc001ddj.1 GeneCards:GC01P067390 HGNC:HGNC:29657 HPA:HPA019589
neXtProt:NX_Q8N108 PharmGKB:PA142671456 OMA:YVPSEDW ChiTaRS:MIER1
GenomeRNAi:57708 NextBio:64594 Bgee:Q8N108 CleanEx:HS_MIER1
Genevestigator:Q8N108 GermOnline:ENSG00000198160 Uniprot:Q8N108
Length = 512
Score = 125 (49.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 64/225 (28%), Positives = 91/225 (40%)
Query: 938 SDWTDEEKSIFIQAVTSYGKDFSMI-ARCIRTRSRDQCKVFFSKARKCLGLDLI--HTGR 994
S WT+EE F Q + +YGKDF +I A +RTRS +C F+ +K D T
Sbjct: 286 SVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRF 345
Query: 995 G----NVGPSVNDDANGGGSDTEDACVLETSSV--NCSDKLGSKTDEELPSHVIHSNQEE 1048
G N+ P V D + ++E A S S+ S++++E V +NQ
Sbjct: 346 GKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSSNSQSEKE-DGTVSTANQNG 404
Query: 1049 SCSAGAKNLQTDLNKPEDD------NGITPLNDKDSEAVKPVNN---DAFRTESRSFELE 1099
S G + LNK E NG T N K A N D T+ + +
Sbjct: 405 VSSNGPGEI---LNKEEVKVEGLHINGPTGGNKKPLHADMDTNGYETDNLTTDPKLAHMT 461
Query: 1100 SNNMNGMDNQSESVLDQKNAVELFKTAVRDKVAEQGAVSVSAGEE 1144
+ N N D +SE ++ K + Q AVS EE
Sbjct: 462 ARNENDFDEKSERPAKRRRVNSNGKESPGSSEFFQEAVSHGKFEE 506
Score = 56 (24.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 19/57 (33%), Positives = 28/57 (49%)
Query: 197 EKKKVEVPDVSGNKDGVFNFSSNAEPLQSLSSNLAEK--SPRVMGFSDCASPATPSS 251
E K+ + D SG +D SSN +P QS++S A++ PR + D S S
Sbjct: 112 ENKEENIKDSSGQEDETQ--SSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEES 166
>UNIPROTKB|Q5REE1 [details] [associations]
symbol:MIER1 "Mesoderm induction early response protein 1"
species:9601 "Pongo abelii" [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0031937 "positive regulation of
chromatin silencing" evidence=ISS] InterPro:IPR001005
InterPro:IPR009057 SMART:SM00717 GO:GO:0017053 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
GO:GO:0031937 HOVERGEN:HBG052923 EMBL:CR857588 UniGene:Pab.3854
ProteinModelPortal:Q5REE1 Uniprot:Q5REE1
Length = 512
Score = 125 (49.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 64/225 (28%), Positives = 91/225 (40%)
Query: 938 SDWTDEEKSIFIQAVTSYGKDFSMI-ARCIRTRSRDQCKVFFSKARKCLGLDLI--HTGR 994
S WT+EE F Q + +YGKDF +I A +RTRS +C F+ +K D T
Sbjct: 286 SVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRF 345
Query: 995 G----NVGPSVNDDANGGGSDTEDACVLETSSV--NCSDKLGSKTDEELPSHVIHSNQEE 1048
G N+ P V D + ++E A S S+ S++++E V +NQ
Sbjct: 346 GKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSSNSQSEKE-DGTVSTTNQNG 404
Query: 1049 SCSAGAKNLQTDLNKPEDD------NGITPLNDKDSEAVKPVNN---DAFRTESRSFELE 1099
S G + LNK E NG T N K A N D T+ + +
Sbjct: 405 VSSNGPGEI---LNKEEVKVEGLHINGPTGGNKKPLHADMDTNGYETDNLTTDPKLAHMT 461
Query: 1100 SNNMNGMDNQSESVLDQKNAVELFKTAVRDKVAEQGAVSVSAGEE 1144
+ N N D +SE ++ K + Q AVS EE
Sbjct: 462 ARNENDFDEKSERPAKRRRVNSNGKESPGSSEFFQEAVSHGKFEE 506
Score = 56 (24.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 19/57 (33%), Positives = 28/57 (49%)
Query: 197 EKKKVEVPDVSGNKDGVFNFSSNAEPLQSLSSNLAEK--SPRVMGFSDCASPATPSS 251
E K+ + D SG +D SSN +P QS++S A++ PR + D S S
Sbjct: 112 ENKEENIKDSSGQEDETQ--SSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEES 166
>UNIPROTKB|Q9NZW4 [details] [associations]
symbol:DSPP "Dentin sialophosphoprotein" species:9606 "Homo
sapiens" [GO:0031214 "biomineral tissue development" evidence=IEA]
[GO:0071460 "cellular response to cell-matrix adhesion"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=TAS] [GO:0005201 "extracellular matrix structural
constituent" evidence=TAS] [GO:0005509 "calcium ion binding"
evidence=TAS] [GO:0005518 "collagen binding" evidence=TAS]
[GO:0007275 "multicellular organismal development" evidence=TAS]
[GO:0001503 "ossification" evidence=TAS] GO:GO:0005578
GO:GO:0005509 GO:GO:0001501 GO:GO:0005518 eggNOG:NOG12793
GO:GO:0031214 GO:GO:0001503 GO:GO:0005201 EMBL:AF163151
EMBL:AC093895 EMBL:AF094508 IPI:IPI00872967 RefSeq:NP_055023.2
UniGene:Hs.678914 ProteinModelPortal:Q9NZW4 STRING:Q9NZW4
PhosphoSite:Q9NZW4 DMDM:215273974 PaxDb:Q9NZW4 PRIDE:Q9NZW4
Ensembl:ENST00000282478 Ensembl:ENST00000399271 GeneID:1834
KEGG:hsa:1834 UCSC:uc003hqu.3 CTD:1834 GeneCards:GC04P088529
HGNC:HGNC:3054 HPA:HPA036230 MIM:125420 MIM:125485 MIM:125490
MIM:125500 MIM:605594 neXtProt:NX_Q9NZW4 Orphanet:1653
Orphanet:166260 Orphanet:166265 PharmGKB:PA27507 HOVERGEN:HBG098252
OMA:ERESKVQ OrthoDB:EOG41RPVG GenomeRNAi:1834 NextBio:7491
PMAP-CutDB:A8MUI0 ArrayExpress:Q9NZW4 Bgee:Q9NZW4 CleanEx:HS_DSPP
Genevestigator:Q9NZW4 GermOnline:ENSG00000152591 GO:GO:0071460
Uniprot:Q9NZW4
Length = 1301
Score = 135 (52.6 bits), Expect = 0.00017, P = 0.00017
Identities = 101/533 (18%), Positives = 185/533 (34%)
Query: 917 DVTQNVDDDTCSDESCGEMDPSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKV 976
D + DD SDES G D + +D S + SY D S + S+
Sbjct: 457 DKSMQGDDPNSSDESNGNDDANSESDNNSSS--RGDASYNSDESK-DNGNGSDSKGAEDD 513
Query: 977 FFSKARKCLGLDLIHTGRGNVGPSVND--DANGGGSDTEDACVLETS-SVNCSDKLGSKT 1033
D G GN G ND D+ G SD+ D+ ++S S + SD S +
Sbjct: 514 DSDSTSDTNNSD--SNGNGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDS 571
Query: 1034 DEELPSHVIHSNQEESCSAGAKNLQTDLNKPEDDNGITPLNDKDSEAVKPVNNDAFRTES 1093
+ S S+ +S + + N + + + DS +D+ ++ES
Sbjct: 572 SDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSES 631
Query: 1094 RSFELESNNMNGMDNQSESVLDQKNAVELFKTAVRDKVAEQGAVSVSAGEESDPCPSSSN 1153
S + +S + + N S+S + ++ + D + S+ +S SS+
Sbjct: 632 DSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSD 691
Query: 1154 AVEETNDVVAEASTEGFGNGLERYQPMLLENSLNDVRDKICNVDACGESEIVQDSNTTGS 1213
+ + +N +E+S + + NS + D + D+ S S+++ S
Sbjct: 692 SSDSSNS--SESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDS 749
Query: 1214 AFDLYXXXXXXXXXXXXXXXXKPPLISLPQWNSHPAAASTQDSSVIQCEKAFIQDRMSST 1273
+ S NS + S+ S + S +
Sbjct: 750 SNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDS 809
Query: 1274 LEFQRSKDKSGHKSVVSDDYRQHLSVHSIVNHVESPQILNGYPLPISTKKEMNGDINCRQ 1333
+ S D S S + + + +S +G S + + + +
Sbjct: 810 SDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSD 869
Query: 1334 LSEVQSISKSDRNID--EPYLAQDCYLRKCNSSMPHSSVTELPFLAENIEQTSDRRRAHS 1391
S+ + S S + D E + D NSS SS + + + +SD + +
Sbjct: 870 SSDSSNSSDSSDSSDSNESSNSSDSS-DSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSN 928
Query: 1392 CSFSDTEKPSKNGDVKLFGKILSHPSSSQKSAFSSHDNGENGHHHKQSSKASN 1444
S + S N S+ S S S+ SS+ + + + SS +SN
Sbjct: 929 SSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSN 981
>UNIPROTKB|Q08DY2 [details] [associations]
symbol:MIER1 "Mesoderm induction early response 1 homolog
(Xenopus laevis)" species:9913 "Bos taurus" [GO:0043123 "positive
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0031937 "positive regulation of chromatin silencing"
evidence=IEA] [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 SMART:SM00717 GO:GO:0017053 GO:GO:0003677
GO:GO:0043123 GO:GO:0003682 SUPFAM:SSF46689 GO:GO:0004871
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR000949 Pfam:PF01448
PROSITE:PS51156 GO:GO:0031937 CTD:57708 eggNOG:NOG327673
HOGENOM:HOG000015798 HOVERGEN:HBG052923 OrthoDB:EOG4KD6MD
OMA:YVPSEDW GeneTree:ENSGT00510000046482 EMBL:DAAA02008488
EMBL:DAAA02008489 EMBL:DAAA02008490 EMBL:BC123513 IPI:IPI00704772
RefSeq:NP_001070381.1 UniGene:Bt.9611 Ensembl:ENSBTAT00000007161
GeneID:538742 KEGG:bta:538742 InParanoid:Q08DY2 NextBio:20877550
Uniprot:Q08DY2
Length = 510
Score = 124 (48.7 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 59/219 (26%), Positives = 98/219 (44%)
Query: 938 SDWTDEEKSIFIQAVTSYGKDFSMI-ARCIRTRSRDQCKVFFSKARKCLGLDLI--HTGR 994
S WT+EE F Q + +YGKDF +I A +RTRS +C F+ +K D T
Sbjct: 284 SVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRF 343
Query: 995 G----NVGPSVNDDANGGGSDTEDACVLETSSV--NCSDKLGSKTDEELPSHVIHSNQEE 1048
G N+ P V D + ++E A S S+ S++++E + +SNQ
Sbjct: 344 GKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSSNSQSEKE-DGTISNSNQNG 402
Query: 1049 SCSAGAKNLQTDLNKPEDDNGITPLNDKDSEAVKPVNND----AFRTESRSFELESNNMN 1104
S G +T LNK E +N + KP++ D + T++++ + + +M
Sbjct: 403 VSSNGPG--ET-LNKEEVKVEGLHVNGPTGGSKKPLHTDMDTNGYETDNQTTDPKITHMT 459
Query: 1105 GMDNQSESVLDQKNAVELFKTAVRDKVAEQGAVSVSAGE 1143
++E+ D+K+ + A R +V G S E
Sbjct: 460 A---RNENDFDEKSE----RPAKRRRVNSNGKESPGGSE 491
Score = 55 (24.4 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 197 EKKKVEVPDVSGNKDGVFNFSSNAEPLQSLSSNLAEK--SPRVMGFSDCAS 245
E K+ + D SG +D SSN +P QS++S A++ PR + D S
Sbjct: 110 ENKEENIKDSSGQEDETQ--SSNDDPSQSVASQDAQEIIRPRRCKYFDTNS 158
>RGD|2323581 [details] [associations]
symbol:LOC100363014 "REST corepressor 1-like" species:10116
"Rattus norvegicus" [GO:0001078 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in negative regulation of transcription"
evidence=IEA;ISO] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0017053 "transcriptional
repressor complex" evidence=IEA;ISO] [GO:0030218 "erythrocyte
differentiation" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045654
"positive regulation of megakaryocyte differentiation"
evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0070933 "histone H4
deacetylation" evidence=IEA;ISO] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 RGD:2323581
GO:GO:0017053 GO:GO:0001078 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0044212 GO:GO:0030218 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0045654 InterPro:IPR000949 PROSITE:PS51156
GO:GO:0070933 GeneTree:ENSGT00550000074554 OMA:TVPQIKK
IPI:IPI00368364 Ensembl:ENSRNOT00000010676 Uniprot:F1LXS5
Length = 366
Score = 95 (38.5 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLD-LIHTGRGNVG 998
WT EE+ + +QA+ YG+DF I+ I +S Q K FF R+ +D ++ G
Sbjct: 266 WTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVNYRRRFSIDEVLQEWEAEHG 325
Query: 999 PSVNDDANG 1007
++ANG
Sbjct: 326 ---KEEANG 331
Score = 80 (33.2 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDCFEKLKKKH 778
WT E++ +F + GK F +I L K+ A V+FYY K+ + +H
Sbjct: 75 WTVEDKVLFEQAFSFHGKTFHRIQQMLPDKSIASLVKFYYSWKKTRTKTSVMDRH 129
>UNIPROTKB|F1PEI0 [details] [associations]
symbol:RCOR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR000949 PROSITE:PS51156
GeneTree:ENSGT00550000074554 OMA:TVPQIKK EMBL:AAEX03006031
Ensembl:ENSCAFT00000028707 Uniprot:F1PEI0
Length = 369
Score = 94 (38.1 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLD 988
WT EE+ + +QA+ YG+DF I+ I +S Q K FF R+ +D
Sbjct: 269 WTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVNYRRRFNID 317
Score = 80 (33.2 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDCFEKLKKKH 778
WT E++ +F + GK F +I L K+ A V+FYY K+ + +H
Sbjct: 78 WTVEDKVLFEQAFSFHGKTFHRIQQMLPDKSIASLVKFYYSWKKTRTKTSVMDRH 132
>POMBASE|SPAC22E12.19 [details] [associations]
symbol:snt1 "Set3 complex subunit Snt1" species:4896
"Schizosaccharomyces pombe" [GO:0003677 "DNA binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IPI] [GO:0016575 "histone deacetylation"
evidence=ISO] [GO:0034967 "Set3 complex" evidence=IDA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IDA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 PomBase:SPAC22E12.19
EMBL:CU329670 GO:GO:0003677 GO:GO:0003682 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0070210 GO:GO:0016575
GO:GO:0034967 OrthoDB:EOG4D82FN EMBL:AB027908 PIR:T38176
RefSeq:NP_594845.2 ProteinModelPortal:Q10369 STRING:Q10369
EnsemblFungi:SPAC22E12.19.1 GeneID:2541792 KEGG:spo:SPAC22E12.19
NextBio:20802880 Uniprot:Q10369
Length = 661
Score = 145 (56.1 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 62/253 (24%), Positives = 109/253 (43%)
Query: 576 SLVKEKFAKKKQ----LLRFKERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCEL-- 629
+L +EKF + KQ ++R + VL K K Q W++ L + AR + E+
Sbjct: 96 NLNREKFQRDKQTIVGVMRKRRHVLNKKIKRLQSHWKQVLGRWE--ENIARVDRLTEIDK 153
Query: 630 --SLRTTYTGYQKHRSSIRSRFSSPAGNLSLVQTAEVINFTSKLLSD----SQIKTYRNS 683
+ + + ++ + S F+ AG++ + E + +KL S +
Sbjct: 154 TKNAKKSEPFIKRSTRKVMSNFT--AGDI-VRSEEEFLEILAKLEQQEKEASNVSEASRI 210
Query: 684 LKMPALILDKKEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDF 743
+P +IL ++E S F + LV D ++M + W E+ IFV + GK F
Sbjct: 211 ATIPPMILSEEEVKSQYFNDQSRLVTDCPKFYHFQSMPDIWNEEQHSIFVQQFILHGKKF 270
Query: 744 RKIASFLNYKTTADCVEFYYKNHKSDCFEKLKKKHDFSKQGKTSTNTYLVTTGKRNRKMN 803
KIA + K + +CV YY ++ + L +K + GK+ K +
Sbjct: 271 GKIAEAVPGKNSKECVLHYYLTKRTTDYRALVASATKTKGRRRKKLLPSQRGGKKKSKGS 330
Query: 804 AASLDILGEASEI 816
A +DI EA++I
Sbjct: 331 ALMVDI--EAADI 341
Score = 42 (19.8 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 12/64 (18%), Positives = 27/64 (42%)
Query: 1323 KEMNGDINCRQLSEVQSISKSDRNIDEPYLAQDCYLRKCNSSMPHSSVTELPFLAENIEQ 1382
K ++ D +++ E+ S+ + + D + S P +S+ L L E+I +
Sbjct: 594 KMVSEDAKSQRIDEL-SVEDQEHTTHSSHTTSDINAFPNSQSFPRASIHTLAALGEDIVE 652
Query: 1383 TSDR 1386
+
Sbjct: 653 RQSK 656
Score = 37 (18.1 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 14/78 (17%), Positives = 34/78 (43%)
Query: 878 SLSSEAMSSCITSSVDPAEGQRDWRRQKADSVMRLPSTSDVTQNVDDDTCSDESCGEMDP 937
S S M + ++ E + + Q+A +T D T +V++ ++E+ +
Sbjct: 327 SKGSALMVDIEAADINKTEENINNQFQEASVTADNMNTWDNTPSVENVESANENVNNHNA 386
Query: 938 SDWTDEEKSIFIQAVTSY 955
+ DE+ ++ ++Y
Sbjct: 387 DEQMDEKIKSLVEGNSAY 404
>ZFIN|ZDB-GENE-050506-79 [details] [associations]
symbol:rcor1 "REST corepressor 1" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:1900052 "regulation of
retinoic acid biosynthetic process" evidence=IGI] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 ZFIN:ZDB-GENE-050506-79 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR000949 Pfam:PF01448
PROSITE:PS51156 GeneTree:ENSGT00550000074554 HOVERGEN:HBG079800
EMBL:AL845481 EMBL:CR392327 IPI:IPI00829256
Ensembl:ENSDART00000104219 InParanoid:Q1MTF5 Uniprot:Q1MTF5
Length = 458
Score = 98 (39.6 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 924 DDTCSDESCGEMDPSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARK 983
DD ES + + + WT EE+ + +QA+ YG+DF I+ I +S Q K FF R+
Sbjct: 341 DDFRPSESNQKFN-TRWTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVNYRR 399
Query: 984 CLGLD 988
LD
Sbjct: 400 RFNLD 404
Score = 78 (32.5 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDCFEKLKKKH 778
WT E++ +F + GK F +I L K+ A V FYY K+ + +H
Sbjct: 146 WTVEDKVLFEQGFSFHGKTFHRIQQMLPDKSIASLVRFYYSWKKTRSKTSVMDRH 200
>UNIPROTKB|F1PLG6 [details] [associations]
symbol:MIER1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0031937 "positive
regulation of chromatin silencing" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717 GO:GO:0017053
GO:GO:0003677 GO:GO:0043123 GO:GO:0003682 SUPFAM:SSF46689
GO:GO:0004871 InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR000949
Pfam:PF01448 PROSITE:PS51156 GO:GO:0031937 CTD:57708 OMA:YVPSEDW
GeneTree:ENSGT00510000046482 EMBL:AAEX03003747 RefSeq:XP_852070.1
Ensembl:ENSCAFT00000029447 GeneID:479536 KEGG:cfa:479536
Uniprot:F1PLG6
Length = 565
Score = 122 (48.0 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 55/192 (28%), Positives = 81/192 (42%)
Query: 938 SDWTDEEKSIFIQAVTSYGKDFSMI-ARCIRTRSRDQCKVFFSKARKCLGLDLI--HTGR 994
S WT+EE F Q + +YGKDF +I A +RTRS +C F+ +K D T
Sbjct: 339 SVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRF 398
Query: 995 G----NVGPSVNDDANGGGSDTEDACVLETSSV--NCSDKLGSKTDEELPSHVIHSNQEE 1048
G N+ P V D + ++E A S S+ S++++E + +SNQ
Sbjct: 399 GKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSSNSQSEKE-DGTISNSNQNG 457
Query: 1049 SCSAGAKNLQTDLNKPEDD------NGITPLNDKDSEAVKPVNN---DAFRTESRSFELE 1099
S G + LNK E NG N + A N D T+ + +
Sbjct: 458 MSSNGPGEM---LNKEEIKVEGLHVNGPAGGNKRPLHADMDTNGYETDNLTTDQKLGHMT 514
Query: 1100 SNNMNGMDNQSE 1111
+ N N D +SE
Sbjct: 515 ARNENDFDEKSE 526
Score = 55 (24.4 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 197 EKKKVEVPDVSGNKDGVFNFSSNAEPLQSLSSNLAEK--SPRVMGFSDCAS 245
E K+ + D SG +D SSN +P QS++S A++ PR + D S
Sbjct: 165 ENKEENIKDSSGQEDETQ--SSNDDPSQSVASQDAQEIIRPRRCKYFDTNS 213
>UNIPROTKB|F1SK28 [details] [associations]
symbol:BDP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR001005 InterPro:IPR009057
SMART:SM00717 GO:GO:0003677 GO:GO:0003682 SUPFAM:SSF46689
OMA:KNENESC GeneTree:ENSGT00390000012762 EMBL:FP236488
EMBL:FP103012 Ensembl:ENSSSCT00000018477 Uniprot:F1SK28
Length = 2442
Score = 132 (51.5 bits), Expect = 0.00048, Sum P(5) = 0.00048
Identities = 92/396 (23%), Positives = 156/396 (39%)
Query: 1057 LQTDLNKPEDDNGITPLNDKD----SEAVKPVNNDAFRTESRSFELESNNMNGMDNQSES 1112
++TDL E + P +++ ++A + D T R L+ N +D SE
Sbjct: 928 METDLK--ETGREVFPREEEEIPKVTDATEERETDLEETVRREISLQENAPEEIDTISEV 985
Query: 1113 VLDQKNAVELFKTAVRDKVAEQGAVSVSAGEESDPCPSSSNAVE-ETNDVVAEASTEGFG 1171
V D K V + + R+K+ + + A EE++ S E T D V+E T G
Sbjct: 986 VTDLKETVR--EISPREKIPD----IIDAAEEAETDLEESERREISTQDKVSEVKTVGDE 1039
Query: 1172 NGLERYQPMLLENSLNDVRDKICNVDACGESEIVQDSNTTGSAFDLYXXXXXXXXXXXXX 1231
E + + +E SL + + + + GE E+ + T F L
Sbjct: 1040 VDSE-LKEIGIEISLRE--NVVVGIRDTGEREVDLEE-TAERDFSLVEKVSGKMTAIEET 1095
Query: 1232 XXX-KPPLISLPQWNSHPAAASTQDSSVIQCEKAFIQD---RMSSTLEFQRSKDKSGHKS 1287
K + S P S + V EK D R ++ E S+ ++G S
Sbjct: 1096 EADLKETGKEIFLKKSRPEEISASEDRVADLEKIRKTDISLRENAREETGTSR-QTGTDS 1154
Query: 1288 VVSDDYRQHLSVHSIVNHVESPQILNGYPLPI----STKKEMNGDINCRQLS-EVQSISK 1342
+ S +V S+ N+ S +IL+ + +++KEM+ ++ +S E + K
Sbjct: 1155 LQSSS-ADCSAVPSLTNNDISSEILSVVHTAVEENRNSEKEMSSQLSHLNISLETSGLDK 1213
Query: 1343 -SDRNIDEPYLAQDCYLRKCNSSMPH----SSVTELPFLAENIEQTSDR--RRAHSCSFS 1395
D+ + P + + + S+P S V PFL ++ R A +
Sbjct: 1214 IEDQRMQSPDVPEQSSDINLSKSLPQEQKPSEVKPAPFLRSRFKRPKPNLARAASKREAT 1273
Query: 1396 DTEK--PSKNGDVKLFGKILSHPSSSQKSAFSS-HD 1428
EK P KN + G ++ P+S Q S SS HD
Sbjct: 1274 GAEKCAPGKNMEPDKVGTVVIQPNSDQMSTLSSQHD 1309
Score = 77 (32.2 bits), Expect = 0.00048, Sum P(5) = 0.00048
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLG 986
W+++E +F A++ G DFSMI + R+R + K F + K G
Sbjct: 307 WSNKETDMFFLAISMVGTDFSMIGQLFPHRARIEIKNKFKREEKTNG 353
Score = 52 (23.4 bits), Expect = 0.00048, Sum P(5) = 0.00048
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 896 EGQRDWRRQKA---DSVMRLPSTSDVTQNVDDDTCSDESCGEMDPSDWTDEEKS 946
E QR R K D + LP+ + +T +++ + +++S + D+ E KS
Sbjct: 175 ENQRPQDRSKMTMRDFIYYLPNNNPMTSSLEQEKKTEKSSTPVQTRDYRQEGKS 228
Score = 38 (18.4 bits), Expect = 0.00048, Sum P(5) = 0.00048
Identities = 16/56 (28%), Positives = 24/56 (42%)
Query: 1029 LGSKTDEE-LPSHV---IHSNQEESCSAGAKNLQ----TDLNKPEDDNGITPLNDK 1076
L KTDEE SH + N E ++ T+ PE D ++ L++K
Sbjct: 637 LQDKTDEENKSSHAETSVEKNHVEKDKTSTSDISVVENTERENPEAD-AVSNLSEK 691
Score = 37 (18.1 bits), Expect = 0.00048, Sum P(5) = 0.00048
Identities = 17/66 (25%), Positives = 27/66 (40%)
Query: 400 SIIRPA-PLQI---DCGDLSVENMPDCSHGLEEVHGNSKDEDIDSPGTATSKFVEPSSFV 455
S+ +PA P + D G+ + S + GN+ +E S T + + SS
Sbjct: 43 SVPKPAEPTDVPPVDSGEAEPQEKTPKSSDEKTDGGNNVEESSKSSPTVSQRRKRLSSTS 102
Query: 456 KPVSPS 461
V PS
Sbjct: 103 SVVKPS 108
>RGD|1562337 [details] [associations]
symbol:Mier1 "mesoderm induction early response 1 homolog
(Xenopus laevis)" species:10116 "Rattus norvegicus" [GO:0003677
"DNA binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0007165
"signal transduction" evidence=ISO] [GO:0017053 "transcriptional
repressor complex" evidence=IEA;ISO] [GO:0031937 "positive
regulation of chromatin silencing" evidence=IEA;ISO] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717 RGD:1562337
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR000949 Pfam:PF01448
PROSITE:PS51156 GeneTree:ENSGT00510000046482 IPI:IPI00948923
Ensembl:ENSRNOT00000066041 UCSC:RGD:1562337 ArrayExpress:E9PT68
Uniprot:E9PT68
Length = 512
Score = 120 (47.3 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 63/235 (26%), Positives = 96/235 (40%)
Query: 938 SDWTDEEKSIFIQAVTSYGKDFSMI-ARCIRTRSRDQCKVFFSKARKCLGLDLI--HTGR 994
S WT+EE F Q + +YGKDF +I A +RTRS +C F+ +K D T
Sbjct: 286 SVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRF 345
Query: 995 G----NVGPSVNDDANGGGSDTEDACVLETSSV--NCSDKLGSKTDEELPSHVIHSNQEE 1048
G N+ P V D + ++E A S S+ S++++E + +SNQ
Sbjct: 346 GKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSSTSQSEKE-DGTLSNSNQNG 404
Query: 1049 SCSAGAKNLQTDLNKPEDDNGITPLNDKDSEAVKPVNNDAFRTESRSFELESN-NMNGMD 1107
S G + LNK E +N KP+ D L ++ + M
Sbjct: 405 VSSNGPGEI---LNKEEVKVEGLHVNGPTGGNKKPLLTDVDTNGYEENNLATDPKLAHMT 461
Query: 1108 NQSESVLDQKNAVELFKTAVRDKVAEQGAVSVSAGEESDPCPSSSNAVEE--TND 1160
++E+ D+KN + A R ++ G S + E S E TND
Sbjct: 462 ARNENDFDEKNE----RPAKRRRINSSGKESPGSSEFFQEAVSHGKFEEHENTND 512
Score = 55 (24.4 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 197 EKKKVEVPDVSGNKDGVFNFSSNAEPLQSLSSNLAEK--SPRVMGFSDCAS 245
E K+ + D SG +D SSN +P QS++S A++ PR + D S
Sbjct: 112 ENKEENIKDSSGQEDETQ--SSNDDPSQSVTSQDAQEIIRPRRCKYFDTNS 160
>UNIPROTKB|E1BWG6 [details] [associations]
symbol:RCOR1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0001078
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0030218
"erythrocyte differentiation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045654 "positive regulation of megakaryocyte differentiation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0017053 GO:GO:0001078 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0044212 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0045654 InterPro:IPR000949 Pfam:PF01448 PROSITE:PS51156
GO:GO:0070933 GeneTree:ENSGT00550000074554 OMA:TVPQIKK
EMBL:AADN02003754 EMBL:AADN02003755 EMBL:AADN02003756
EMBL:AADN02003757 EMBL:AADN02003758 EMBL:AADN02003759
IPI:IPI00602567 Ensembl:ENSGALT00000018569 Uniprot:E1BWG6
Length = 382
Score = 91 (37.1 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLD 988
WT +E+ + +QA+ YG+DF I+ I +S Q K FF R+ +D
Sbjct: 282 WTTDEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVNYRRRFNID 330
Score = 80 (33.2 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDCFEKLKKKH 778
WT E++ +F + GK F +I L K+ A V+FYY K+ + +H
Sbjct: 91 WTVEDKVLFEQAFSFHGKTFHRIQQMLPDKSIASLVKFYYSWKKTRTKTSVMDRH 145
>MGI|MGI:1918398 [details] [associations]
symbol:Mier1 "mesoderm induction early response 1 homolog
(Xenopus laevis" species:10090 "Mus musculus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007165 "signal transduction" evidence=ISO] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0031937
"positive regulation of chromatin silencing" evidence=ISO]
[GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=ISO] InterPro:IPR001005 InterPro:IPR009057
SMART:SM00717 MGI:MGI:1918398 GO:GO:0017053 GO:GO:0003677
GO:GO:0043123 GO:GO:0006351 GO:GO:0003682 SUPFAM:SSF46689
GO:GO:0004871 InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR000949
Pfam:PF01448 PROSITE:PS51156 GO:GO:0031937 CTD:57708
eggNOG:NOG327673 HOVERGEN:HBG052923 OrthoDB:EOG4KD6MD OMA:YVPSEDW
EMBL:AY769435 EMBL:AY769436 EMBL:AY769437 EMBL:AY769438
EMBL:AK129405 EMBL:AK016915 EMBL:AL844176 EMBL:BC130227
IPI:IPI00480337 IPI:IPI00624310 IPI:IPI00648188 IPI:IPI00656167
IPI:IPI00656177 RefSeq:NP_001034170.1 RefSeq:NP_081972.2
UniGene:Mm.288721 ProteinModelPortal:Q5UAK0 SMR:Q5UAK0
PhosphoSite:Q5UAK0 PaxDb:Q5UAK0 PRIDE:Q5UAK0
Ensembl:ENSMUST00000030247 Ensembl:ENSMUST00000097945
Ensembl:ENSMUST00000106855 Ensembl:ENSMUST00000106857
Ensembl:ENSMUST00000106858 GeneID:71148 KEGG:mmu:71148
UCSC:uc008txf.1 UCSC:uc008txj.1 UCSC:uc012dhr.1
GeneTree:ENSGT00510000046482 InParanoid:B1AY29 NextBio:333131
Bgee:Q5UAK0 Genevestigator:Q5UAK0 GermOnline:ENSMUSG00000028522
Uniprot:Q5UAK0
Length = 511
Score = 118 (46.6 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 63/235 (26%), Positives = 95/235 (40%)
Query: 938 SDWTDEEKSIFIQAVTSYGKDFSMI-ARCIRTRSRDQCKVFFSKARKCLGLDLI--HTGR 994
S WT+EE F Q + +YGKDF +I A +RTRS +C F+ +K D T
Sbjct: 285 SVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRF 344
Query: 995 G----NVGPSVNDDANGGGSDTEDACVLETSSV--NCSDKLGSKTDEELPSHVIHSNQEE 1048
G N+ P V D + ++E A S S+ S++++E V NQ
Sbjct: 345 GKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSSNSQSEKE-DGAVSSRNQNG 403
Query: 1049 SCSAGAKNLQTDLNKPEDDNGITPLNDKDSEAVKPVNNDAFRTESRSFELESN-NMNGMD 1107
S G + LNK E +N KP+ D + L ++ + M
Sbjct: 404 VSSNGPGEI---LNKEEVKVEGLHVNGPTGGNKKPLLTDMDTNGYEANNLTTDPKLAHMT 460
Query: 1108 NQSESVLDQKNAVELFKTAVRDKVAEQGAVSVSAGEESDPCPSSSNAVEE--TND 1160
++E+ D+KN + A R ++ G S + E S E TND
Sbjct: 461 ARNENDFDEKNE----RPAKRRRINSSGKESPGSSEFFQEAVSHGKFEEHENTND 511
Score = 55 (24.4 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 197 EKKKVEVPDVSGNKDGVFNFSSNAEPLQSLSSNLAEK--SPRVMGFSDCAS 245
E K+ + D SG +D SSN +P QS++S A++ PR + D S
Sbjct: 111 ENKEENIKDSSGQEDETQ--SSNDDPSQSVTSQDAQEIIRPRRCKYFDTNS 159
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.127 0.364 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1696 1574 0.00081 125 3 11 23 0.48 34
40 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 59
No. of states in DFA: 631 (67 KB)
Total size of DFA: 643 KB (2282 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 168.74u 0.14s 168.88t Elapsed: 00:00:07
Total cpu time: 168.78u 0.14s 168.92t Elapsed: 00:00:08
Start: Tue May 21 05:22:01 2013 End: Tue May 21 05:22:09 2013