BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000305
(1696 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q4KKX4|NCOR1_XENTR Nuclear receptor corepressor 1 OS=Xenopus tropicalis GN=ncor1 PE=2
SV=1
Length = 2494
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 129/274 (47%), Gaps = 26/274 (9%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
+ +I N++ A EA ++L+ L P+ + + + ++++ + +KK +L
Sbjct: 227 IVQIIYDENRKKAEEAHKILEGLGPK--VELPLYNQPSDTKVYHENIKTNQVMRKKLILF 284
Query: 591 FKERVLTLKFKAFQHLWREDLRLLSIRKYRAR----SQKKCELSLRTTYTGYQKHRSSIR 646
FK R K + R D + + K R ++K + S Y Y+K IR
Sbjct: 285 FKRRNHARKLREQNICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREY--YEKQFPEIR 342
Query: 647 ---------SRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALIL 691
R LS + +E+I+ S+ ++ K R +P ++
Sbjct: 343 KQREQQERFQRVGQRGAGLSATIARSEHEISEIIDGLSE--QENNEKQMRQLSVIPPMMF 400
Query: 692 DKKEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLN 751
D E+ +FI+ NGL+EDP V K+R +N WT E+EIF +K K+F IAS+L
Sbjct: 401 DA-EQRRVKFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKEKFVQHPKNFGLIASYLE 459
Query: 752 YKTTADCVEFYYKNHKSDCFEKLKKKHDFSKQGK 785
KT +DCV +YY K++ F+ L +++ ++G+
Sbjct: 460 RKTVSDCVLYYYLTKKNENFKALVRRNYPKRRGR 493
>sp|O75376|NCOR1_HUMAN Nuclear receptor corepressor 1 OS=Homo sapiens GN=NCOR1 PE=1 SV=2
Length = 2440
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 123/272 (45%), Gaps = 22/272 (8%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
+ +I N++ A EA ++ + L P+ + + + ++++ + +KK +L
Sbjct: 235 IVQIIYDENRKKAEEAHKIFEGLGPK--VELPLYNQPSDTKVYHENIKTNQVMRKKLILF 292
Query: 591 FK---------ERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKH 641
FK E+ + ++ W + + + R + K + +K
Sbjct: 293 FKRRNHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQ 352
Query: 642 RSSIR--SRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILDK 693
R R LS + +E+I+ S+ ++ K R +P ++ D
Sbjct: 353 REQQERFQRVGQRGAGLSATIARSEHEISEIIDGLSE--QENNEKQMRQLSVIPPMMFDA 410
Query: 694 KEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYK 753
E+ +FI+ NGL+EDP V K+R +N WT E+EIF DK K+F IAS+L K
Sbjct: 411 -EQRRVKFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDKFIQHPKNFGLIASYLERK 469
Query: 754 TTADCVEFYYKNHKSDCFEKLKKKHDFSKQGK 785
+ DCV +YY K++ ++ L +++ ++G+
Sbjct: 470 SVPDCVLYYYLTKKNENYKALVRRNYGKRRGR 501
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 938 SDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLD 988
S WT+EE + + + +G++++ IA+ + T+S QCK F+ ++ LD
Sbjct: 626 SRWTEEEMEVAKKGLVEHGRNWAAIAKMVGTKSEAQCKNFYFNYKRRHNLD 676
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDCFEKLKKKH 778
WT EE E+ L G+++ IA + K+ A C FY+ + + L ++H
Sbjct: 628 WTEEEMEVAKKGLVEHGRNWAAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQH 682
>sp|Q60974|NCOR1_MOUSE Nuclear receptor corepressor 1 OS=Mus musculus GN=Ncor1 PE=1 SV=1
Length = 2453
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 123/272 (45%), Gaps = 22/272 (8%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
+ +I N++ A EA ++ + L P+ + + + ++++ + +KK +L
Sbjct: 235 IVQIIYDENRKKAEEAHKIFEGLGPK--VELPLYNQPSDTKVYHENIKTNQVMRKKLILF 292
Query: 591 FK---------ERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKH 641
FK E+ + ++ W + + + R + K + +K
Sbjct: 293 FKRRNHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQ 352
Query: 642 RSSIR--SRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILDK 693
R R LS + +E+I+ S+ ++ K R +P ++ D
Sbjct: 353 REQQERFQRVGQRGAGLSATIARSEHEISEIIDGLSE--QENNEKQMRQLSVIPPMMFDA 410
Query: 694 KEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYK 753
E+ +FI+ NGL+EDP V K+R +N WT E+EIF DK K+F IAS+L K
Sbjct: 411 -EQRRVKFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKDKFIQHPKNFGLIASYLERK 469
Query: 754 TTADCVEFYYKNHKSDCFEKLKKKHDFSKQGK 785
+ DCV +YY K++ ++ L +++ ++G+
Sbjct: 470 SVPDCVLYYYLTKKNENYKALVRRNYGKRRGR 501
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 938 SDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLD 988
S WT+EE + + + +G++++ IA+ + T+S QCK F+ ++ LD
Sbjct: 625 SRWTEEEMEVAKKGLVEHGRNWAAIAKMVGTKSEAQCKNFYFNYKRRHNLD 675
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDCFEKLKKKH 778
WT EE E+ L G+++ IA + K+ A C FY+ + + L ++H
Sbjct: 627 WTEEEMEVAKKGLVEHGRNWAAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQH 681
>sp|Q8QG78|NCOR1_XENLA Nuclear receptor corepressor 1 OS=Xenopus laevis GN=ncor1 PE=1 SV=1
Length = 2498
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 128/274 (46%), Gaps = 26/274 (9%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
+ +I N++ A EA + L+ L P+ + + + ++++ + +KK +L
Sbjct: 227 VVQIIYDENRKKAEEAHKFLEGLGPK--VELPLYNQPSDTKVYHENIKTNQVMRKKLILF 284
Query: 591 FKERVLTLKFKAFQHLWREDLRLLSIRKYRAR----SQKKCELSLRTTYTGYQKHRSSIR 646
FK R K + R D + + K R ++K + S Y Y+K IR
Sbjct: 285 FKRRNHARKLREQNICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREY--YEKQFPEIR 342
Query: 647 S------RFS---------SPAGNLSLVQTAEVINFTSKLLSDSQIKTYRNSLKMPALIL 691
RF S S + +E+I+ S+ ++ K R +P ++
Sbjct: 343 KQREQQERFQRVGQRGTGMSATIARSEHEISEIIDGLSE--QENNEKQMRQLSVIPPMMF 400
Query: 692 DKKEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLN 751
D E+ +FI++NGL+EDP V K+R +N WT E+EIF +K K+F IAS+L
Sbjct: 401 DA-EQRRVKFINTNGLMEDPMKVYKDRQFMNVWTDHEKEIFKEKFVRHPKNFGLIASYLE 459
Query: 752 YKTTADCVEFYYKNHKSDCFEKLKKKHDFSKQGK 785
K +DCV +YY K++ + L +++ ++G+
Sbjct: 460 RKNVSDCVLYYYLTKKNENLKSLVRRNYPKRRGR 493
>sp|Q9Y618|NCOR2_HUMAN Nuclear receptor corepressor 2 OS=Homo sapiens GN=NCOR2 PE=1 SV=2
Length = 2525
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 127/274 (46%), Gaps = 24/274 (8%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
L +I N++ A A +L+ L P+ + + + ++++ + +KK +L
Sbjct: 226 LVQIIYDENRKKAEAAHRILEGLGPQ--VELPLYNQPSDTRQYHENIKINQAMRKKLILY 283
Query: 591 FK---------ERVLTLKFKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKH 641
FK E+ ++ W + + + R + K + +K
Sbjct: 284 FKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQ 343
Query: 642 RS---SIRSRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILD 692
R ++SR LS+ + +E+I+ S+ ++ K R +P ++ D
Sbjct: 344 RELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSE--QENLEKQMRQLAVIPPMLYD 401
Query: 693 KKEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNY 752
++ +FI+ NGL+ DP V K+R ++N W+ +E+E F +K K+F IASFL
Sbjct: 402 A-DQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLER 460
Query: 753 KTTADCVEFYYKNHKSDCFEKLKKKHDFSKQGKT 786
KT A+CV +YY K++ ++ L ++ + ++GK+
Sbjct: 461 KTVAECVLYYYLTKKNENYKSLVRR-SYRRRGKS 493
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 938 SDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLI 990
S WT+EE + + +G+++S IAR + +++ QCK F+ +K LD I
Sbjct: 613 SRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNLDEI 665
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDCFEKLKKKHDF 780
WT EE E L G+++ IA + KT + C FY+ K +++ ++H
Sbjct: 615 WTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNLDEILQQHKL 671
>sp|Q9WU42|NCOR2_MOUSE Nuclear receptor corepressor 2 OS=Mus musculus GN=Ncor2 PE=1 SV=3
Length = 2472
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 126/274 (45%), Gaps = 24/274 (8%)
Query: 531 LCDMILGANKELANEASEVLKKLLPRDHSNIDISGVANVFCCQNDSLVKEKFAKKKQLLR 590
L +I N++ A A +L+ L P+ + + + ++++ + +KK +L
Sbjct: 226 LVQIIYDENRKKAEAAHRILEGLGPQ--VELPLYNQPSDTRQYHENIKINQAMRKKLILY 283
Query: 591 FKERVLTLK---------FKAFQHLWREDLRLLSIRKYRARSQKKCELSLRTTYTGYQKH 641
FK R K + W + + + R + K + +K
Sbjct: 284 FKRRNHARKQWEQRFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQ 343
Query: 642 RS---SIRSRFSSPAGNLSLV------QTAEVINFTSKLLSDSQIKTYRNSLKMPALILD 692
R ++SR LS+ + +E+I+ S+ ++ K R +P ++ D
Sbjct: 344 RELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSE--QENLEKQMRQLAVIPPMLYD 401
Query: 693 KKEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNY 752
++ +FI+ NGL++DP V K+R + N W+ +ER+ F +K K+F IASFL
Sbjct: 402 A-DQQRIKFINMNGLMDDPMKVYKDRQVTNMWSEQERDTFREKFMQHPKNFGLIASFLER 460
Query: 753 KTTADCVEFYYKNHKSDCFEKLKKKHDFSKQGKT 786
KT A+CV +YY K++ ++ L ++ + ++GK+
Sbjct: 461 KTVAECVLYYYLTKKNENYKSLVRR-SYRRRGKS 493
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 938 SDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLI 990
S WT+EE + + +G+++S IAR + +++ QCK F+ +K LD I
Sbjct: 609 SRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNLDEI 661
Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDCFEKLKKKHDF 780
WT EE E L G+++ IA + KT + C FY+ K +++ ++H
Sbjct: 611 WTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNLDEILQQHKL 667
>sp|Q55DP9|MYBP_DICDI Myb-like protein P OS=Dictyostelium discoideum GN=mybP PE=3 SV=1
Length = 1448
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Query: 695 EKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYKT 754
E+ + +I+ NG + DP A EK+R + WT +E++ FV K + K F KIASF + +T
Sbjct: 1051 EERNIHYINHNGFIVDPIAQEKQRKSLIIWTEDEKQKFVKKYLQYPKKFSKIASFFDNRT 1110
Query: 755 TADCVEFYYKNHKSDCFEKLKKKHDFSKQGKTSTN----TYLVTTGKRNRKMNAASLDIL 810
T D + FYY N K+ ++L + K+G+ S Y+VT + + L+ +
Sbjct: 1111 TEDMIVFYYNNKKTLNLKQLLFEAQSKKRGRKSNVFDPLNYIVT--------DKSGLNFM 1162
Query: 811 GE 812
GE
Sbjct: 1163 GE 1164
Score = 40.8 bits (94), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 31/49 (63%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLD 988
WT+ E+ +F AV +G F++IA +++++ QC+ F+ +++ LD
Sbjct: 1365 WTEHERELFNIAVQKHGTQFNLIADYVQSKTGAQCRSFYYNSKRKSRLD 1413
Score = 40.0 bits (92), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYY 763
WT ERE+F + G F IA ++ KT A C FYY
Sbjct: 1365 WTEHERELFNIAVQKHGTQFNLIADYVQSKTGAQCRSFYY 1404
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGL 987
WT++EK F++ Y K FS IA R+ + VF+ +K L L
Sbjct: 1080 WTEDEKQKFVKKYLQYPKKFSKIASFFDNRTTEDMIVFYYNNKKTLNL 1127
>sp|Q6NRZ0|RCOR2_XENLA REST corepressor 2 OS=Xenopus laevis GN=rcor2 PE=2 SV=1
Length = 503
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 142/378 (37%), Gaps = 69/378 (18%)
Query: 638 YQKHRSSIRSRFSSPAGNLSLVQTAEVINFTSKLLSDSQIKTYRNSLKMPALILDKKEKM 697
YQ + +SP+GN+ L ++ S+ +SD+++ Y I KEK
Sbjct: 49 YQAQIPECKPDNTSPSGNVEL--KGMLVWSPSQFVSDAKLNEY---------ITMAKEKH 97
Query: 698 SSRFISSNG-LVEDPCAVEK---ERAMINP----WTSEEREIFVDKLATFGKDFRKIASF 749
S G L+ VE+ + A P W+ E++ +F + GK F++I
Sbjct: 98 GYNVEQSLGMLLWHKHDVERSLADLANFTPFPEEWSVEDKVLFEQAFSFHGKSFQRIQQM 157
Query: 750 LNYKTTADCVEFYYKNHKSDCFEKLKKKHDFSKQGKTSTNTYLVTTGKRNRKMNAASLDI 809
L K V++YY K+ + + Q K V + KM+ D+
Sbjct: 158 LPEKLIPSLVKYYYSWKKTRSRTSVMDRQARRLQAKREEGMEEV---EDQIKMSDNETDV 214
Query: 810 LGEASEIAAAAQVDGRQLISSGRISSGGRGDSRTSLGDDGIIERSSSFDVIGGERETAAA 869
+E A V Q + SG +S G G R + +I + + +R
Sbjct: 215 ----TETKKEAPVP--QKVVSGAVS-GKTGPVR----KEPLISQYRHHPLRSRQRPPKGI 263
Query: 870 DV----LAGICGSLSSEAMSSCITSSVDPAEGQRDWRRQKADSVMRLPSTSDVTQNVDDD 925
+ ++ +C S A++ C + +L S QN+
Sbjct: 264 HLNKSDVSAVCASSEMPAIALCQLET-------------------QLISLKRQVQNIKQM 304
Query: 926 TCS-----DESCGEMDPSD--------WTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRD 972
S + EM P + WT +E+ + +QAV YGKDF I+ + ++
Sbjct: 305 NSSLKESLEGGISEMRPPELNIKLNARWTTDEQLLAVQAVRKYGKDFQAISEVLGNKTPS 364
Query: 973 QCKVFFSKARKCLGLDLI 990
Q K FF R+ L+ +
Sbjct: 365 QVKTFFISYRRRFNLEEV 382
>sp|Q10369|YDBJ_SCHPO Uncharacterized protein C22E12.19 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC22E12.19 PE=4 SV=2
Length = 661
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 93/218 (42%), Gaps = 31/218 (14%)
Query: 576 SLVKEKFAKKKQ----LLRFKERVLTLKFKAFQHLWREDL-----------RLLSIRKYR 620
+L +EKF + KQ ++R + VL K K Q W++ L RL I K
Sbjct: 96 NLNREKFQRDKQTIVGVMRKRRHVLNKKIKRLQSHWKQVLGRWEENIARVDRLTEIDK-- 153
Query: 621 ARSQKKCELSLRTTYTGYQKHRSSIRSRFSSPAGNLSLVQTAEVINFTSKLLSD----SQ 676
++ KK E ++ RS+ + + AG++ + E + +KL S
Sbjct: 154 TKNAKKSEPFIK---------RSTRKVMSNFTAGDI-VRSEEEFLEILAKLEQQEKEASN 203
Query: 677 IKTYRNSLKMPALILDKKEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKL 736
+ +P +IL ++E S F + LV D ++M + W E+ IFV +
Sbjct: 204 VSEASRIATIPPMILSEEEVKSQYFNDQSRLVTDCPKFYHFQSMPDIWNEEQHSIFVQQF 263
Query: 737 ATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDCFEKL 774
GK F KIA + K + +CV YY ++ + L
Sbjct: 264 ILHGKKFGKIAEAVPGKNSKECVLHYYLTKRTTDYRAL 301
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 937 PSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKC 984
P W +E+ SIF+Q +GK F IA + ++ +C + + ++
Sbjct: 248 PDIWNEEQHSIFVQQFILHGKKFGKIAEAVPGKNSKECVLHYYLTKRT 295
>sp|Q8BXJ2|TREF1_MOUSE Transcriptional-regulating factor 1 OS=Mus musculus GN=Trerf1 PE=1
SV=1
Length = 1205
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDCFEKLKKKH 778
WTS ER++F LAT+ KDF + + KT A CVE+YY K +L +KH
Sbjct: 896 WTSLERKLFNKALATYSKDFIFVQKMVKSKTVAQCVEYYYTWKK---IMRLGRKH 947
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 31/55 (56%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLIHTGR 994
WT E+ +F +A+ +Y KDF + + +++++ QC ++ +K + L H R
Sbjct: 896 WTSLERKLFNKALATYSKDFIFVQKMVKSKTVAQCVEYYYTWKKIMRLGRKHRTR 950
>sp|Q96PN7|TREF1_HUMAN Transcriptional-regulating factor 1 OS=Homo sapiens GN=TRERF1 PE=1
SV=1
Length = 1200
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDCFEKLKKKH 778
WTS ER++F LAT+ KDF + + KT A CVE+YY K +L +KH
Sbjct: 890 WTSLERKLFNKALATYSKDFIFVQKMVKSKTVAQCVEYYYTWKK---IMRLGRKH 941
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 31/55 (56%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLIHTGR 994
WT E+ +F +A+ +Y KDF + + +++++ QC ++ +K + L H R
Sbjct: 890 WTSLERKLFNKALATYSKDFIFVQKMVKSKTVAQCVEYYYTWKKIMRLGRKHRTR 944
>sp|Q6P116|RCOR2_DANRE REST corepressor 2 OS=Danio rerio GN=rcor2 PE=2 SV=1
Length = 536
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 909 VMRLPSTSDVTQNVDDDTCSDESCGEMDP---SDWTDEEKSIFIQAVTSYGKDFSMIARC 965
V ++ T+ V +N D D E + S WT EE+ + +QAV YGKDF+ IA
Sbjct: 299 VQKIKQTNSVLRNNLGDGIEDMRPREPNQKINSRWTTEEQLLAVQAVRRYGKDFAAIADV 358
Query: 966 IRTRSRDQCKVFFSKARKCLGLDLI-------HTGRGNVGPSVNDDANGGGSDTEDACVL 1018
I ++ Q FF R+ L+ + +G+ G +VN + NG +D +
Sbjct: 359 IGNKTVAQVSSFFVSYRRRFNLEEVLREWQAEQEVQGSSGRTVNTELNGSAELEDDEVKM 418
Query: 1019 ETSSVNCSD 1027
+ S SD
Sbjct: 419 DGISPPHSD 427
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 708 VEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFY 762
+ED E + + + WT+EE+ + V + +GKDF IA + KT A F+
Sbjct: 317 IEDMRPREPNQKINSRWTTEEQLLAVQAVRRYGKDFAAIADVIGNKTVAQVSSFF 371
>sp|Q8IZ40|RCOR2_HUMAN REST corepressor 2 OS=Homo sapiens GN=RCOR2 PE=1 SV=2
Length = 523
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 938 SDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLI 990
S WT +E+ + +QA+ YGKDF IA I ++ Q K FF R+ L+ +
Sbjct: 330 SRWTTDEQLLAVQAIRRYGKDFGAIAEVIGNKTLTQVKTFFVSYRRRFNLEEV 382
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 69/177 (38%), Gaps = 15/177 (8%)
Query: 638 YQKHRSSIRSR-----FSSPAGNLSLVQTAEVINFTSKLLSDSQIKTYRNSLKMPALILD 692
Y+ H R R + SP G ++ + ++ N T + L I R M
Sbjct: 248 YRHHPLRTRRRPPKGMYLSPEGLTAVSGSPDLANLTLRGLDSQLISLKRQVQSM------ 301
Query: 693 KKEKMSSRFISSNGLVEDPCAVEKERAMINP-WTSEEREIFVDKLATFGKDFRKIASFLN 751
K+ S R G+ DP + N WT++E+ + V + +GKDF IA +
Sbjct: 302 KQTNSSLRQALEGGI--DPLRPPEANTKFNSRWTTDEQLLAVQAIRRYGKDFGAIAEVIG 359
Query: 752 YKTTADCVEFYYKNHKSDCFEKLKKKHDFSKQGKTSTNTYLVTTGKRNRKMNAASLD 808
KT F+ + E++ ++ + + G + +R + A +L+
Sbjct: 360 NKTLTQVKTFFVSYRRRFNLEEVLQEWEAEQDGAPGAPVPM-EEARRGAPLPAPALE 415
>sp|Q8C796|RCOR2_MOUSE REST corepressor 2 OS=Mus musculus GN=Rcor2 PE=2 SV=1
Length = 523
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 938 SDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLI 990
S WT +E+ + +QA+ YGKDF IA I ++ Q K FF R+ L+ +
Sbjct: 330 SRWTTDEQLLAVQAIRRYGKDFGAIAEVIGNKTLTQVKTFFVSYRRRFNLEEV 382
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 61/153 (39%), Gaps = 14/153 (9%)
Query: 638 YQKHRSSIRSR-----FSSPAGNLSLVQTAEVINFTSKLLSDSQIKTYRNSLKMPALILD 692
Y+ H R R + SP G ++ + ++ N T + L I R M
Sbjct: 248 YRHHPLRTRRRPPKGMYLSPEGLTAVSGSPDLANLTLRGLDSQLISLKRQVQSM------ 301
Query: 693 KKEKMSSRFISSNGLVEDPCAVEKERAMINP-WTSEEREIFVDKLATFGKDFRKIASFLN 751
K+ S R G+ DP + N WT++E+ + V + +GKDF IA +
Sbjct: 302 KQTNSSLRQALEGGI--DPLRPPEANTKFNSRWTTDEQLLAVQAIRRYGKDFGAIAEVIG 359
Query: 752 YKTTADCVEFYYKNHKSDCFEKLKKKHDFSKQG 784
KT F+ + E++ ++ + + G
Sbjct: 360 NKTLTQVKTFFVSYRRRFNLEEVLQEWEAEQDG 392
>sp|Q5FWT8|RCOR2_RAT REST corepressor 2 OS=Rattus norvegicus GN=Rcor2 PE=2 SV=1
Length = 523
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 938 SDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLI 990
S WT +E+ + +QA+ YGKDF IA I ++ Q K FF R+ L+ +
Sbjct: 330 SRWTTDEQLLAVQAIRRYGKDFGAIAEVIGNKTLTQVKTFFVSYRRRFNLEEV 382
Score = 38.5 bits (88), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 70/177 (39%), Gaps = 15/177 (8%)
Query: 638 YQKHRSSIRSR-----FSSPAGNLSLVQTAEVINFTSKLLSDSQIKTYRNSLKMPALILD 692
Y+ H R R + SP G ++ + ++ N T + L I R M
Sbjct: 248 YRHHPLRTRRRPPKGMYLSPEGLTAVSGSPDLANLTLRGLDSQLISLKRQVQSM------ 301
Query: 693 KKEKMSSRFISSNGLVEDPCAVEKERAMINP-WTSEEREIFVDKLATFGKDFRKIASFLN 751
K+ S R G+ DP + N WT++E+ + V + +GKDF IA +
Sbjct: 302 KQTNSSLRQALEGGI--DPLRPPEANTKFNSRWTTDEQLLAVQAIRRYGKDFGAIAEVIG 359
Query: 752 YKTTADCVEFYYKNHKSDCFEKLKKKHDFSKQGKTSTNTYLVTTGKRNRKMNAASLD 808
KT F+ + E++ ++ + + G T V +R + A +L+
Sbjct: 360 NKTLTQVKTFFVSYRRRFNLEEVLQEWEAEQDG-APTAPVPVEEARRGAPVPATALE 415
>sp|P34333|GEI8_CAEEL Gex-3-interacting protein 8 OS=Caenorhabditis elegans GN=gei-8 PE=1
SV=3
Length = 1866
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 97/240 (40%), Gaps = 46/240 (19%)
Query: 558 HSNIDISGVANVFCCQNDSLVKEKFAKKKQLLRFKE--RVLTLKFKAFQHLWREDLRLLS 615
+S +D+ + F C D LV FKE R KFKAFQ +DL
Sbjct: 69 NSGLDLLLIFCSFPCLFDVLV----------FTFKELAREYDEKFKAFQ----DDL---- 110
Query: 616 IRKYRARSQKKCELSLRTTYTGYQKHRSSIRSRFSSPA---------GNLSLVQTAEVIN 666
QK E S R Y + HR S F ++ + +
Sbjct: 111 --------QKWEETSERKEYAEF--HRVQAESEFPELKREREDRERWARAERIRGEDEKS 160
Query: 667 FTSKLLSDSQIKTYRNSLKMPALILDKKEKMSSRFISSNGLVEDPCAVEKERAMIN---P 723
+K +D +I+ K+P L+ + + KM F+ G + E +++++
Sbjct: 161 MLAKEHADKKIRL--GVAKIPRLLTESERKMDE-FVERPGSILKDMKKEHRQSVLDRLEE 217
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDCFEK-LKKKHDFSK 782
W+ EER +F + A K F + F KT +D V FYY N K++ ++K K K +K
Sbjct: 218 WSPEERSLFKSRQADHVKIFHGLTEFFVDKTASDLVLFYYMNKKTEDYKKDFKPKKRVTK 277
>sp|Q9P2K3|RCOR3_HUMAN REST corepressor 3 OS=Homo sapiens GN=RCOR3 PE=1 SV=2
Length = 495
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 11/99 (11%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGL-DLIHTGRGNVG 998
WT EE+ + +Q V YGKDF IA I ++ Q K FF R+ L +++ G
Sbjct: 290 WTTEEQLLAVQGVRKYGKDFQAIADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQG 349
Query: 999 PSV-NDDANGGGSDTEDACVLETSSVNCSDKLGSKTDEE 1036
N DA+ G +T+ A + + G TDEE
Sbjct: 350 TQASNGDASTLGEETKSASNVPS---------GKSTDEE 379
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 79/175 (45%), Gaps = 13/175 (7%)
Query: 632 RTTYTGYQKHRSSIRSRFSSPAGNLSLVQTAEVINFTSKLLSDSQIKTYRNSLKMPALIL 691
R Y Q S RS+ P G + L Q +V+ + S + T L M LI
Sbjct: 198 RREYQSLQHRHHSQRSKCRPPKG-MYLTQ-EDVVAVSC---SPNAANTILRQLDM-ELIS 251
Query: 692 DKKEKMSSRFISS------NGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRK 745
K++ +++ ++S G +E+ E + + WT+EE+ + V + +GKDF+
Sbjct: 252 LKRQVQNAKQVNSALKQKMEGGIEEFKPPESNQKINARWTTEEQLLAVQGVRKYGKDFQA 311
Query: 746 IASFLNYKTTADCVEFYYKNHKSDCFEKLKKKHDFSKQGKTSTNTYLVTTGKRNR 800
IA + KT F+ + E++ ++ + ++QG ++N T G+ +
Sbjct: 312 IADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWE-AEQGTQASNGDASTLGEETK 365
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYY 763
WT E++ +F + GK F +I L KT A V++YY
Sbjct: 89 WTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYY 128
>sp|Q6PJG2|EMSA1_HUMAN ELM2 and SANT domain-containing protein 1 OS=Homo sapiens
GN=ELMSAN1 PE=1 SV=2
Length = 1045
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHK 767
W ER++F +A + KDF + + KT A CVEFYY K
Sbjct: 833 WKMAERKLFNKGIAIYKKDFFLVQKLIQTKTVAQCVEFYYTYKK 876
>sp|Q90WN5|RCOR1_XENLA REST corepressor 1 OS=Xenopus laevis GN=rcor1 PE=2 SV=1
Length = 431
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLD-LIHTGRGNVG 998
WT EE+ + +QA+ YG+DF I+ I +S Q K FF R+ +D ++ G
Sbjct: 332 WTTEEQLLAVQAIRMYGRDFQAISDVIGNKSVVQVKNFFVNYRRRFNIDQVLQEWEAEHG 391
Query: 999 PSVNDDANGGGSDTEDACVLETSSVNCSDK 1028
+ + G TE A L +++ SD+
Sbjct: 392 KTEEN-----GDCTEKAVKLPETAIKMSDE 416
Score = 37.4 bits (85), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYY 763
WT E+R +F + GK F +I L K+ A V+FYY
Sbjct: 141 WTVEDRVLFEQAFSFHGKTFHRIQQMLPDKSIASLVKFYY 180
>sp|Q9UKL0|RCOR1_HUMAN REST corepressor 1 OS=Homo sapiens GN=RCOR1 PE=1 SV=1
Length = 482
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLI 990
WT EE+ + +QA+ YG+DF I+ I +S Q K FF R+ +D +
Sbjct: 383 WTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVNYRRRFNIDEV 433
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDCFEKLKKKH 778
WT E++ +F + GK F +I L K+ A V+FYY K+ + +H
Sbjct: 192 WTVEDKVLFEQAFSFHGKTFHRIQQMLPDKSIASLVKFYYSWKKTRTKTSVMDRH 246
>sp|Q8CFE3|RCOR1_MOUSE REST corepressor 1 OS=Mus musculus GN=Rcor1 PE=1 SV=2
Length = 477
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLI 990
WT EE+ + +QA+ YG+DF I+ I +S Q K FF R+ +D +
Sbjct: 377 WTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVNYRRRFNIDEV 427
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDCFEKLKKKH 778
WT E++ +F + GK F +I L K+ A V+FYY K+ + +H
Sbjct: 186 WTVEDKVLFEQAFSFHGKTFHRIQQMLPDKSIASLVKFYYSWKKTRTKTSVMDRH 240
>sp|Q5UAK0|MIER1_MOUSE Mesoderm induction early response protein 1 OS=Mus musculus GN=Mier1
PE=1 SV=2
Length = 511
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMI-ARCIRTRSRDQCKVFFSKARKCLGLDLI--HTGRG- 995
WT+EE F Q + +YGKDF +I A +RTRS +C F+ +K D T G
Sbjct: 287 WTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGK 346
Query: 996 ---NVGPSVND 1003
N+ P V D
Sbjct: 347 KKYNLHPGVTD 357
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 714 VEKERAMINPWTSEEREIFVDKLATFGKDFRKI-ASFLNYKTTADCVEFYYKNHKSDCFE 772
V+ R ++ WT EE F L +GKDF I A+ + ++ +CV FYY KS+ ++
Sbjct: 277 VKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYD 336
Query: 773 KLKKKHDFSKQ 783
++ F K+
Sbjct: 337 FFAQQTRFGKK 347
>sp|Q8N108|MIER1_HUMAN Mesoderm induction early response protein 1 OS=Homo sapiens GN=MIER1
PE=1 SV=2
Length = 512
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMI-ARCIRTRSRDQCKVFFSKARKCLGLDLI--HTGRG- 995
WT+EE F Q + +YGKDF +I A +RTRS +C F+ +K D T G
Sbjct: 288 WTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGK 347
Query: 996 ---NVGPSVND 1003
N+ P V D
Sbjct: 348 KKYNLHPGVTD 358
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 714 VEKERAMINPWTSEEREIFVDKLATFGKDFRKI-ASFLNYKTTADCVEFYYKNHKSDCFE 772
V+ R ++ WT EE F L +GKDF I A+ + ++ +CV FYY KS+ ++
Sbjct: 278 VKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYD 337
Query: 773 KLKKKHDFSKQ 783
++ F K+
Sbjct: 338 FFAQQTRFGKK 348
>sp|Q5REE1|MIER1_PONAB Mesoderm induction early response protein 1 OS=Pongo abelii GN=MIER1
PE=2 SV=2
Length = 512
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMI-ARCIRTRSRDQCKVFFSKARKCLGLDLI--HTGRG- 995
WT+EE F Q + +YGKDF +I A +RTRS +C F+ +K D T G
Sbjct: 288 WTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGK 347
Query: 996 ---NVGPSVND 1003
N+ P V D
Sbjct: 348 KKYNLHPGVTD 358
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 714 VEKERAMINPWTSEEREIFVDKLATFGKDFRKI-ASFLNYKTTADCVEFYYKNHKSDCFE 772
V+ R ++ WT EE F L +GKDF I A+ + ++ +CV FYY KS+ ++
Sbjct: 278 VKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYD 337
Query: 773 KLKKKHDFSKQ 783
++ F K+
Sbjct: 338 FFAQQTRFGKK 348
>sp|Q4R3R9|MIER3_MACFA Mesoderm induction early response protein 3 OS=Macaca fascicularis
GN=MIER3 PE=2 SV=1
Length = 550
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 721 INPWTSEEREIFVDKLATFGKDFRKIA-SFLNYKTTADCVEFYYKNHKSDCFEKLKKKHD 779
+ WT EE F L FGKDF I + + +T A+CV FYY KS+ ++ ++
Sbjct: 279 MTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTR 338
Query: 780 FSKQ 783
F K+
Sbjct: 339 FGKK 342
Score = 38.9 bits (89), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMIARC-IRTRSRDQCKVFFSKARK 983
WT+EE F A+ +GKDF +I + +RTR+ +C F+ +K
Sbjct: 282 WTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKK 326
>sp|Q7Z3K6|MIER3_HUMAN Mesoderm induction early response protein 3 OS=Homo sapiens
GN=MIER3 PE=1 SV=2
Length = 550
Score = 43.5 bits (101), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 721 INPWTSEEREIFVDKLATFGKDFRKIA-SFLNYKTTADCVEFYYKNHKSDCFEKLKKKHD 779
+ WT EE F L FGKDF I + + +T A+CV FYY KS+ ++ ++
Sbjct: 279 MTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTR 338
Query: 780 FSKQ 783
F K+
Sbjct: 339 FGKK 342
Score = 38.9 bits (89), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMIARC-IRTRSRDQCKVFFSKARK 983
WT+EE F A+ +GKDF +I + +RTR+ +C F+ +K
Sbjct: 282 WTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKK 326
>sp|Q59E36|RCOR_DROME REST corepressor OS=Drosophila melanogaster GN=CoRest PE=1 SV=1
Length = 657
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 8/116 (6%)
Query: 883 AMSSCITSSVDPAEGQRDWRR---QKADSVMRLPSTSDVTQNVDD-----DTCSDESCGE 934
A++SC S+ AE +R +K VM T NVDD + ES
Sbjct: 309 ALASCGNPSLYLAERERKLTALMAEKNRQVMEQLDKECETINVDDVLSKPAAANTESAQP 368
Query: 935 MDPSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLI 990
+ W +E + + A+ YGK+F IA+ + T++ + F+ R+ LD I
Sbjct: 369 RISARWLPDEIQVALLAIREYGKNFPTIAKVVATKTEAHVRTFYLNNRRRYNLDQI 424
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 685 KMPALILDKKEKMSSRF------ISSNGLVEDPCAVEKERA---MINPWTSEEREIFVDK 735
K+ AL+ +K ++ + I+ + ++ P A E A + W +E ++ +
Sbjct: 326 KLTALMAEKNRQVMEQLDKECETINVDDVLSKPAAANTESAQPRISARWLPDEIQVALLA 385
Query: 736 LATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDCFEKLKKKHDFSK 782
+ +GK+F IA + KT A FY N + +++ K+++ K
Sbjct: 386 IREYGKNFPTIAKVVATKTEAHVRTFYLNNRRRYNLDQIVKEYEAGK 432
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYY----KNHKSDCFEKLKK 776
WT E++ +F GK F +I L K+ A V++YY H+S ++ +K
Sbjct: 181 WTIEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRHRSSAMDRQEK 237
>sp|Q7T105|MIER1_XENLA Mesoderm induction early response protein 1 OS=Xenopus laevis
GN=mier1 PE=2 SV=1
Length = 495
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMI-ARCIRTRSRDQCKVFFSKARKCLGLDLIHT------ 992
WT+EE F Q + +YGKDF +I A +RTRS +C F+ +K D
Sbjct: 279 WTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGK 338
Query: 993 GRGNVGPSVND 1003
+ N+ P V D
Sbjct: 339 KKYNLHPGVTD 349
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 714 VEKERAMINPWTSEEREIFVDKLATFGKDFRKI-ASFLNYKTTADCVEFYYKNHKSDCFE 772
V+ R ++ WT EE F L +GKDF I A+ + ++ +CV FYY KS+ ++
Sbjct: 269 VKAAREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYD 328
Query: 773 KLKKKHDFSKQ 783
++ F K+
Sbjct: 329 FFAQQTRFGKK 339
>sp|Q5ZKT9|MIER1_CHICK Mesoderm induction early response protein 1 OS=Gallus gallus
GN=MIER1 PE=2 SV=1
Length = 513
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 12/132 (9%)
Query: 714 VEKERAMINPWTSEEREIFVDKLATFGKDFRKI-ASFLNYKTTADCVEFYYKNHKSDCFE 772
V+ R ++ WT EE F L +GKDF I A+ + ++ +CV FYY KS+ ++
Sbjct: 280 VKAAREELSVWTEEECRNFEQGLKVYGKDFHVIQANKVRTRSVGECVAFYYMWKKSERYD 339
Query: 773 KLKKKHDFSKQGKTSTNTYLVTTGKRNRKMNAASLDILGEASEIAAAAQVDGRQLISSGR 832
++ F GK N + T +R +L E+ A++ S+
Sbjct: 340 FFAQQTRF---GKKKYNLHPGVTDYMDR--------LLDESESAASSRAPSPPPTASNSS 388
Query: 833 ISSGGRGDSRTS 844
S R DS TS
Sbjct: 389 TSQSEREDSTTS 400
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMI-ARCIRTRSRDQCKVFFSKARKCLGLDLI--HTGRG- 995
WT+EE F Q + YGKDF +I A +RTRS +C F+ +K D T G
Sbjct: 290 WTEEECRNFEQGLKVYGKDFHVIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGK 349
Query: 996 ---NVGPSVND 1003
N+ P V D
Sbjct: 350 KKYNLHPGVTD 360
>sp|O76906|CRM_DROME Protein cramped OS=Drosophila melanogaster GN=crm PE=1 SV=2
Length = 982
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 53/131 (40%), Gaps = 31/131 (23%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLN-------------YKTTADCVEFYYKNHKSDC 770
WT+ ER F D L FGKDF +A+ +N +KT + YY+ H C
Sbjct: 114 WTNVERNCFFDALNEFGKDFEAVANCINAKLKRRNANSDYSFKTKDQVRQHYYQTHHKIC 173
Query: 771 FEKLKKKHDFSKQGKTSTNTY--LVTTGKRNRKMNAASLDILGEASEIAAAAQVDGRQLI 828
K FS++ K L+ G+ RK L L E + +QL+
Sbjct: 174 -----KYVRFSEELKKPAQELYTLINYGEMRRK-----LQFLTEKHFMKL------KQLV 217
Query: 829 SSGRISSGGRG 839
G+I+ +G
Sbjct: 218 YQGQITVRCKG 228
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 938 SDWTDEEKSIFIQAVTSYGKDFSMIARCIRTR 969
+ WT+ E++ F A+ +GKDF +A CI +
Sbjct: 112 TTWTNVERNCFFDALNEFGKDFEAVANCINAK 143
>sp|Q9H0D2|ZN541_HUMAN Zinc finger protein 541 OS=Homo sapiens GN=ZNF541 PE=2 SV=2
Length = 1365
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYY---KNHKSDC 770
WT E+ +F KDF I + KT A CVE+YY K K DC
Sbjct: 1184 WTPIEKRLFKKAFYAHKKDFYLIHKMIQTKTVAQCVEYYYIWKKMIKFDC 1233
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLD 988
WT EK +F +A ++ KDF +I + I+T++ QC ++ +K + D
Sbjct: 1184 WTPIEKRLFKKAFYAHKKDFYLIHKMIQTKTVAQCVEYYYIWKKMIKFD 1232
>sp|Q9R190|MTA2_MOUSE Metastasis-associated protein MTA2 OS=Mus musculus GN=Mta2 PE=1
SV=1
Length = 668
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIAS-FLNYKTTADCVEFYYKNHKSDCF---EKLKKKHD 779
W++ E +F + L +GKDF I FL +K+ A V+FYY +D + ++LK
Sbjct: 268 WSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRYIQQKRLKAAEA 327
Query: 780 FSKQGKTSTNTY 791
SK + TY
Sbjct: 328 DSKLKQVYIPTY 339
>sp|O94776|MTA2_HUMAN Metastasis-associated protein MTA2 OS=Homo sapiens GN=MTA2 PE=1
SV=1
Length = 668
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIAS-FLNYKTTADCVEFYYKNHKSDCF---EKLKKKHD 779
W++ E +F + L +GKDF I FL +K+ A V+FYY +D + ++LK
Sbjct: 268 WSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRYIQQKRLKAAEA 327
Query: 780 FSKQGKTSTNTY 791
SK + TY
Sbjct: 328 DSKLKQVYIPTY 339
>sp|Q0GGX2|ZN541_MOUSE Zinc finger protein 541 OS=Mus musculus GN=Znf541 PE=1 SV=1
Length = 1363
Score = 42.0 bits (97), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYY---KNHKSDC 770
WT E+ +F KDF I + K+ A CVE+YY K K DC
Sbjct: 1175 WTPMEKRLFKKAFCAHKKDFYLIHKMIQTKSVAQCVEYYYIWKKMVKFDC 1224
Score = 40.8 bits (94), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLD 988
WT EK +F +A ++ KDF +I + I+T+S QC ++ +K + D
Sbjct: 1175 WTPMEKRLFKKAFCAHKKDFYLIHKMIQTKSVAQCVEYYYIWKKMVKFD 1223
>sp|A5PJX4|MIER2_BOVIN Mesoderm induction early response protein 2 OS=Bos taurus GN=MIER2
PE=2 SV=1
Length = 561
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMI-ARCIRTRSRDQCKVFFSKARKCLGLDLI----HTGR 994
W++EE+ F +GK+F +I A +RTRS +C ++ +K D GR
Sbjct: 302 WSEEERRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFSQQTRLGR 361
Query: 995 GNVGPSVNDDAN 1006
GPS N DA+
Sbjct: 362 RKYGPSGNTDAD 373
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 724 WTSEEREIFVDKLATFGKDFRKI-ASFLNYKTTADCVEFYYKNHKSDCFEKLKKKHDFSK 782
W+ EER F GK+F I A+ + ++ +CVE+YY KS+ ++ FS+
Sbjct: 302 WSEEERRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDY------FSQ 355
Query: 783 QGKTSTNTY 791
Q + Y
Sbjct: 356 QTRLGRRKY 364
>sp|Q4R2Z8|ZN541_MACFA Zinc finger protein 541 (Fragment) OS=Macaca fascicularis GN=ZNF541
PE=2 SV=2
Length = 804
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYY---KNHKSDC 770
WT E+ +F KDF I + KT A CVE+YY K K DC
Sbjct: 621 WTPIEKRLFKKAFYAHKKDFYLIHKTIQTKTVAQCVEYYYIWKKMIKFDC 670
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLD 988
WT EK +F +A ++ KDF +I + I+T++ QC ++ +K + D
Sbjct: 621 WTPIEKRLFKKAFYAHKKDFYLIHKTIQTKTVAQCVEYYYIWKKMIKFD 669
>sp|Q54IF9|MYBG_DICDI Myb-like protein G OS=Dictyostelium discoideum GN=mybG PE=3 SV=1
Length = 423
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
Query: 711 PCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDC 770
P + K+R WT EE + F++ L F +D++KI SF+ KT ++H
Sbjct: 34 PYTISKQREN---WTDEEHQKFLEALTLFDRDWKKIESFVGSKTVIQI-----RSHAQKY 85
Query: 771 FEKLKK 776
F K++K
Sbjct: 86 FIKVQK 91
>sp|Q8MX88|CRM_DROSE Protein cramped OS=Drosophila sechellia GN=crm PE=3 SV=1
Length = 975
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 53/131 (40%), Gaps = 31/131 (23%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLN-------------YKTTADCVEFYYKNHKSDC 770
WT+ ER F D L FGKDF +A+ +N +KT + YY+ + C
Sbjct: 114 WTNVERNCFFDALNEFGKDFEAVANCINAKLKRRNANSDYSFKTKDQVRQHYYQTYHKIC 173
Query: 771 FEKLKKKHDFSKQGKTSTNTY--LVTTGKRNRKMNAASLDILGEASEIAAAAQVDGRQLI 828
K FS++ K L+ G+ RK L L E + +QL+
Sbjct: 174 -----KYVRFSEELKKPAQELYTLINYGEMRRK-----LQFLTEKHFMKL------KQLV 217
Query: 829 SSGRISSGGRG 839
G+I+ +G
Sbjct: 218 YQGQITVRCKG 228
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 938 SDWTDEEKSIFIQAVTSYGKDFSMIARCIRTR 969
+ WT+ E++ F A+ +GKDF +A CI +
Sbjct: 112 TTWTNVERNCFFDALNEFGKDFEAVANCINAK 143
>sp|Q69Z66|MYSM1_MOUSE Histone H2A deubiquitinase MYSM1 OS=Mus musculus GN=Mysm1 PE=2 SV=2
Length = 819
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 692 DKKEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLN 751
D K+ +S SS +V+ P K + WT EE+E+F LA FG+ + KIA+ L
Sbjct: 89 DNKKYTNSLQKSSKAMVDSPA---KPASHSVKWTVEEKELFEQGLAKFGRRWTKIATLLK 145
Query: 752 YKTTADCVEF---YYKNHKSDCFEKLKKKHDFSKQGKTS-TNTYLVTTGKRNRKMNAASL 807
+T + Y+KN K K D K+ T +++ L K +R A+
Sbjct: 146 SRTVLQVKSYARQYFKN---------KVKWDVEKETPTQKSSSDLQVKNKDDRTKAWAAA 196
Query: 808 DILGEASEIAAAAQVD 823
+ G A A +++
Sbjct: 197 CLRGSADPCLNAVKIE 212
>sp|Q3UHF3|MIER3_MOUSE Mesoderm induction early response protein 3 OS=Mus musculus
GN=Mier3 PE=1 SV=2
Length = 551
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 721 INPWTSEEREIFVDKLATFGKDFRKIAS-FLNYKTTADCVEFYYKNHKSDCFEKLKKKHD 779
+ WT EE F L GKDF I + +T A+CV FYY KS+ ++ ++
Sbjct: 280 MTAWTEEECRSFEHALMLHGKDFHLIQKDKVRSRTVAECVAFYYMWKKSERYDYFAQQTK 339
Query: 780 FSKQ 783
F K+
Sbjct: 340 FGKK 343
>sp|Q13330|MTA1_HUMAN Metastasis-associated protein MTA1 OS=Homo sapiens GN=MTA1 PE=1
SV=2
Length = 715
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIAS-FLNYKTTADCVEFYYKNHKSDCFEKLKK 776
W++ E +F + L +GKDF I FL +K+ +E+YY +D + + K+
Sbjct: 288 WSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRYVQQKR 341
>sp|Q8K4B0|MTA1_MOUSE Metastasis-associated protein MTA1 OS=Mus musculus GN=Mta1 PE=1
SV=1
Length = 715
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIAS-FLNYKTTADCVEFYYKNHKSDCFEKLKK 776
W++ E +F + L +GKDF I FL +K+ +E+YY +D + + K+
Sbjct: 288 WSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRYVQQKR 341
>sp|A6QL72|MTA3_BOVIN Metastasis-associated protein MTA3 OS=Bos taurus GN=MTA3 PE=2 SV=1
Length = 590
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIAS-FLNYKTTADCVEFYYKNHKSDCF---EKLKKKHD 779
W++ E +F + L +GKDF I FL +K+ +E+YY +D + ++LK
Sbjct: 271 WSASEASLFEEALEKYGKDFNDIRQDFLPWKSLTSIIEYYYMWKTTDRYVQQKRLKAAEA 330
Query: 780 FSKQGKTSTNTY 791
SK + TY
Sbjct: 331 ESKLKQVYIPTY 342
>sp|Q62599|MTA1_RAT Metastasis-associated protein MTA1 OS=Rattus norvegicus GN=Mta1
PE=1 SV=1
Length = 703
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIAS-FLNYKTTADCVEFYYKNHKSDCFEKLKK 776
W++ E +F + L +GKDF I FL +K+ +E+YY +D + + K+
Sbjct: 288 WSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRYVQQKR 341
>sp|Q9BTC8|MTA3_HUMAN Metastasis-associated protein MTA3 OS=Homo sapiens GN=MTA3 PE=1
SV=2
Length = 594
Score = 38.9 bits (89), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIAS-FLNYKTTADCVEFYYKNHKSDCF---EKLKKKHD 779
W++ E +F + L +GKDF I FL +K+ +E+YY +D + ++LK
Sbjct: 271 WSASEASLFEEALEKYGKDFNDIRQDFLPWKSLTSIIEYYYMWKTTDRYVQQKRLKAAEA 330
Query: 780 FSKQGKTSTNTY 791
SK + TY
Sbjct: 331 ESKLKQVYIPTY 342
>sp|Q9XI07|SWI3C_ARATH SWI/SNF complex subunit SWI3C OS=Arabidopsis thaliana GN=SWI3C PE=1
SV=1
Length = 807
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 30/48 (62%)
Query: 933 GEMDPSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSK 980
G+ D +WTD+E + ++AV Y +++ IA + ++S+ QC + F +
Sbjct: 396 GDQDGDNWTDQETLLLLEAVELYNENWVQIADHVGSKSKAQCILHFLR 443
>sp|O14470|SSR2_SCHPO SWI/SNF and RSC complexes subunit ssr2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ssr2 PE=1 SV=3
Length = 503
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 28/39 (71%)
Query: 940 WTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFF 978
W+++E + ++A+ +YG D++ IA + +R+++QC + F
Sbjct: 250 WSNQETLLLLEAIETYGDDWNQIALHVGSRTKEQCLIHF 288
Score = 35.4 bits (80), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 723 PWTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDCFEKLKKKHDFSK 782
PW+++E + ++ + T+G D+ +IA + +T C+ + + D + + K + DFS
Sbjct: 249 PWSNQETLLLLEAIETYGDDWNQIALHVGSRTKEQCLIHFLQIPIEDPYRQ-KLQGDFSP 307
Query: 783 QGK------------TSTNTYL---VTTGKRNRKMN 803
K ST TYL V G + RK N
Sbjct: 308 FKKGFLPFDENENPVLSTLTYLASIVQQGMKERKQN 343
>sp|A0JMR6|MYSM1_XENLA Histone H2A deubiquitinase MYSM1 OS=Xenopus laevis GN=mysm1 PE=2
SV=1
Length = 818
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 937 PSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVF 977
P WT EEK++F Q + ++G+ ++ IAR I +RS Q K +
Sbjct: 109 PVKWTKEEKNLFEQGLATFGRRWTSIARLIGSRSVLQVKNY 149
Score = 34.7 bits (78), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 14/113 (12%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEF---YYKNH-KSDCFEKLKKK-- 777
WT EE+ +F LATFG+ + IA + ++ + Y+KN K + F K + K
Sbjct: 112 WTKEEKNLFEQGLATFGRRWTSIARLIGSRSVLQVKNYARHYFKNKCKLEGFVKEEAKIG 171
Query: 778 -------HDFSKQGKTSTNTYLVTTGKRNRKMNAASLDILGEASEIAAAAQVD 823
D+ + T+ G+ + +NA ++ L + EI +VD
Sbjct: 172 SLQIPNLQDYENEPDI-TDEPTTFRGRADPNLNAIKIEKLSDDEEIDITDEVD 223
>sp|Q6PGA0|RCOR3_MOUSE REST corepressor 3 OS=Mus musculus GN=Rcor3 PE=2 SV=2
Length = 451
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYY 763
WT E++ +F + GK F +I L KT A V++YY
Sbjct: 145 WTVEDKVLFEQAFSFHGKSFHRIQQMLPDKTIASLVKYYY 184
>sp|Q924K8|MTA3_MOUSE Metastasis-associated protein MTA3 OS=Mus musculus GN=Mta3 PE=1
SV=1
Length = 591
Score = 38.1 bits (87), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 724 WTSEEREIFVDKLATFGKDFRKIAS-FLNYKTTADCVEFYYKNHKSDCF---EKLKKKHD 779
W++ E +F + L +GKDF I FL +K+ +E+YY +D + ++LK
Sbjct: 270 WSASEACLFEEALEKYGKDFNDIRQDFLPWKSLTSIIEYYYMWKTTDRYVQQKRLKAAEA 329
Query: 780 FSKQGKTSTNTY 791
SK + TY
Sbjct: 330 ESKLKQVYIPTY 341
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.127 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 613,213,592
Number of Sequences: 539616
Number of extensions: 26304887
Number of successful extensions: 58096
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 131
Number of HSP's that attempted gapping in prelim test: 57164
Number of HSP's gapped (non-prelim): 763
length of query: 1696
length of database: 191,569,459
effective HSP length: 132
effective length of query: 1564
effective length of database: 120,340,147
effective search space: 188211989908
effective search space used: 188211989908
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 69 (31.2 bits)