Query         000305
Match_columns 1696
No_of_seqs    260 out of 433
Neff          3.1 
Searched_HMMs 29240
Date          Tue Mar 26 16:36:28 2013
Command       hhsearch -i /local_scratch/syshi/lefta3m/000305.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_84-88//hhsearch_pdb/000305hhsearch_pdb 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2xag_B REST corepressor 1; ami   1.0       1       1  274.5   1.6  229  719-997   187-440 (482)
  2 4a69_C Nuclear receptor corepr   1.0       1       1  224.3   7.2   93  679-772     2-94  (94)
  3 2iw5_B Protein corest, REST co   1.0       1       1  137.0   3.6   66  936-1001  132-197 (235)
  4 2crg_A Metastasis associated p   1.0       1       1  117.9   4.7   59  717-775     4-63  (70)
  5 2eqr_A N-COR1, N-COR, nuclear    1.0       1       1  117.5   6.2   56  715-770     6-61  (61)
  6 2yqk_A Arginine-glutamic acid    1.0       1       1  110.6   5.1   54  719-772     7-61  (63)
  7 2iw5_B Protein corest, REST co   1.0       1       1   99.3   5.8   64  715-778   127-190 (235)
  8 2ltp_A Nuclear receptor corepr   1.0       1       1   92.4   0.0   61  936-996    15-75  (89)
  9 2eqr_A N-COR1, N-COR, nuclear    1.0       1       1   92.0   6.1   50  937-986    12-61  (61)
 10 2yqk_A Arginine-glutamic acid    1.0       1       1   91.6   6.1   50  937-986     9-59  (63)

No 1  
>2xag_B REST corepressor 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_B* 2xah_B* 2xaj_B* 2xaq_B* 2xas_B*
Probab=1.00  E-value=1  Score=274.54  Aligned_cols=229  Identities=19%  Similarity=0.282  Sum_probs=137.0

Q ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             36999999999999999974498877897330889966788885411567573888731024788987666422224533
Q 000305          719 AMINPWTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDCFEKLKKKHDFSKQGKTSTNTYLVTTGKR  798 (1696)
Q Consensus       719 q~in~WTEEEkeiF~EKylqhPKnFGkIAs~Lp~KTvsDCVlfYYltKKs~nYKkLlRk~~lRKRGKss~~nyL~~sgkk  798 (1696)
                      ...+.||++|+.+|.++|.+|||+|++|+.+|++|++++||.|||+|||+.+|++++++ ..+++++.+...        
T Consensus       187 p~~d~WT~eE~~lFe~al~~yGKdF~~I~~~lp~Ksv~e~V~yYY~WKKt~~yk~l~~~-~~rr~krk~~es--------  257 (482)
T 2xag_B          187 PFPDEWTVEDKVLFEQAFSFHGKTFHRIQQMLPDKSIASLVKFYYSWKKTRTKTSVMDR-HARKQKREREES--------  257 (482)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHH-HHHHCCCCCCCC--------
T ss_conf             54432689999999999998286099999984999789998985364456638999998-876438775544--------


Q ss_pred             CCCCCCCHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC---CCCCCC
Q ss_conf             31121100210003579999853103222244544579988988878998843457876668985200000---012231
Q 000305          799 NRKMNAASLDILGEASEIAAAAQVDGRQLISSGRISSGGRGDSRTSLGDDGIIERSSSFDVIGGERETAAA---DVLAGI  875 (1696)
Q Consensus       799 Nre~naaSlDilgaaS~~Aa~a~~a~~~~~sS~~i~~~g~~eskk~e~~dg~~erss~~D~~G~EREtvaA---dvkAgI  875 (1696)
                      ..+.           ....+...         ..|.   + +..+...+++..... . ..... +.++..   +.++++
T Consensus       258 ~~e~-----------e~~~~~~~---------~~~e---~-d~~ke~~~~~~~~~~-~-~~~rg-~~~~~~~~~r~K~rp  310 (482)
T 2xag_B          258 EDEL-----------EEANGNNP---------IDIE---V-DQNKESKKEVPPTET-V-PQVKK-EKHSTQAKNRAKRKP  310 (482)
T ss_dssp             -----------------------------------------------------------------------------CCC
T ss_pred             CCCC-----------CCCCCCCC---------CCCC---C-CCCCCCCCCCCCCCC-C-CCCCC-CCCCCCCCCCCCCCC
T ss_conf             2111-----------12357886---------5322---4-554224556776655-4-44345-432344455434689


Q ss_pred             CCCCCCCCCC-CCCCCCCCC-----CCCCHHHHH----------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             2345533333-455567799-----454011110----------------123433467888533445688877756679
Q 000305          876 CGSLSSEAMS-SCITSSVDP-----AEGQRDWRR----------------QKADSVMRLPSTSDVTQNVDDDTCSDESCG  933 (1696)
Q Consensus       876 tgSmSsEa~s-sc~TsSvDP-----~~G~re~K~----------------~Kv~s~~~~P~t~dvtq~~deet~SdeS~g  933 (1696)
                      +++|..+.-. .++.++...     .+...+..+                .++..+..+...+++.              
T Consensus       311 prgM~~~~edv~a~s~s~~~~~~~l~~~d~el~slk~qvq~~kq~~s~~~~~~~~g~~~~r~~e~~--------------  376 (482)
T 2xag_B          311 PKGMFLSQEDVEAVSANATAATTVLRQLDMELVSVKRQIQNIKQTNSALKEKLDGGIEPYRLPEVI--------------  376 (482)
T ss_dssp             STTCCCCHHHHHHHHSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTGGGCCCCCC--------------
T ss_pred             CCCCCCCHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC--------------
T ss_conf             987777565666530474213333203320589999999999988788887641255444577555--------------


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             8999999999999999999991989699997828989999999999978870987555687888
Q 000305          934 EMDPSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLIHTGRGNV  997 (1696)
Q Consensus       934 Em~ssrWTdEEkelFleaL~kYGKDW~aIA~~VGTKTv~QcKsFY~kyRKrlnLD~il~e~~~~  997 (1696)
                      .-.+.+||++|+.+|++||++|||||.+||++|||||+.|||+||++||+|++||.+++++...
T Consensus       377 ~~~~~~WT~eE~~~f~~al~~yGkdw~~IA~~VgTKT~~Qvk~fy~~~kkr~~ld~il~e~e~~  440 (482)
T 2xag_B          377 QKCNARWTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVNYRRRFNIDEVLQEWEAE  440 (482)
T ss_dssp             CCCCSCCCHHHHHHHHHHHHHHTTCHHHHHHHHSSCCHHHHHHHHHHTTTTTTHHHHHHHHHTC
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_conf             6568999989999999999997868999997837998999999999999870829899999874


No 2  
>4a69_C Nuclear receptor corepressor 2; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens} PDB: 1xc5_A
Probab=1.00  E-value=1  Score=224.27  Aligned_cols=93  Identities=37%  Similarity=0.708  Sum_probs=90.3

Q ss_pred             HHHCCCCCCCCCCCHHHHCCCEECCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHH
Q ss_conf             21012456965469641112063047998764578985303699999999999999997449887789733088996678
Q 000305          679 TYRNSLKMPALILDKKEKMSSRFISSNGLVEDPCAVEKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYKTTADC  758 (1696)
Q Consensus       679 ~mR~aAvIPpMILD~eERr~~kFiDtNgLVeDP~avyKerq~in~WTEEEkeiF~EKylqhPKnFGkIAs~Lp~KTvsDC  758 (1696)
                      +||++|+|||||+|+++|+ .+|+|+||||+||+++|++++.++.||++|+++|+++|.+|||+|++||++|+.||++||
T Consensus         2 ~~r~~A~IP~m~~d~~~~~-~~f~d~n~lv~dp~~~~~~r~~~~~WT~eE~~~F~~~~~~~gK~F~~Ia~~l~~Kt~~~c   80 (94)
T 4a69_C            2 AMRQLAVIPPMLYDADQQR-IKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKTVAEC   80 (94)
T ss_dssp             ---------------------CCBCTTSBBSCHHHHHHHHHHTCCCCHHHHHHHHHHHHHSTTCHHHHHHTCTTCCHHHH
T ss_pred             CCHHCCCCCCCCCCHHHHH-HEECCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHH
T ss_conf             3012135897668878885-122046876668799984657778879999999999999939988999987199988999


Q ss_pred             HHHHHHCCCCCCHH
Q ss_conf             88854115675738
Q 000305          759 VEFYYKNHKSDCFE  772 (1696)
Q Consensus       759 VlfYYltKKs~nYK  772 (1696)
                      |+|||+|||+.+||
T Consensus        81 V~~YY~~Kk~~~Yk   94 (94)
T 4a69_C           81 VLYYYLTKKNENYK   94 (94)
T ss_dssp             HHHHHHHSCC----
T ss_pred             HHHHHCCCCCCCCC
T ss_conf             99983314686779


No 3  
>2iw5_B Protein corest, REST corepressor 1; oxidoreductase-transcription regulator complex, oxidoreductase/repressor complex, histone demethylase, FAD; HET: FAD; 2.57A {Homo sapiens} SCOP: a.4.1.3 PDB: 2uxn_B* 2uxx_B* 2y48_B* 2v1d_B* 2x0l_B*
Probab=1.00  E-value=1  Score=137.03  Aligned_cols=66  Identities=29%  Similarity=0.440  Sum_probs=60.3

Q ss_pred             CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             999999999999999999919896999978289899999999999788709875556878889987
Q 000305          936 DPSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLIHTGRGNVGPSV 1001 (1696)
Q Consensus       936 ~ssrWTdEEkelFleaL~kYGKDW~aIA~~VGTKTv~QcKsFY~kyRKrlnLD~il~e~~~~g~P~ 1001 (1696)
                      ...+||++|+.+|++||.+|||||.+||++|||||+.|||+||++|++|++||.++++++....|+
T Consensus       132 ~s~~WTeEE~~lFleAl~kYGKDW~~IAk~VgTKT~~QcKnfY~~~kKRlnLD~ilke~eae~g~~  197 (235)
T 2iw5_B          132 CNARWTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVNYRRRFNIDEVLQEWEAEHGKE  197 (235)
T ss_dssp             CCSSCCHHHHHHHHHHHHHHSSCHHHHHHHHSSCCHHHHHHHHHHTTTTTTHHHHHHHHHTC----
T ss_pred             CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             679989899999999999988689999977599999999999999999866899999999863887


No 4  
>2crg_A Metastasis associated protein MTA3; transcription factor, helix turn helix, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.3
Probab=1.00  E-value=1  Score=117.92  Aligned_cols=59  Identities=29%  Similarity=0.638  Sum_probs=54.2

Q ss_pred             HCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH-HCCCCCHHHHHHHHHHCCCCCCHHHHH
Q ss_conf             30369999999999999999744988778973-308899667888854115675738887
Q 000305          717 ERAMINPWTSEEREIFVDKLATFGKDFRKIAS-FLNYKTTADCVEFYYKNHKSDCFEKLK  775 (1696)
Q Consensus       717 erq~in~WTEEEkeiF~EKylqhPKnFGkIAs-~Lp~KTvsDCVlfYYltKKs~nYKkLl  775 (1696)
                      .++.++.||++|+++|.+++..|||+|++|+. +|+.||++|||.|||+|||+.+|++..
T Consensus         4 ~r~~~~~WT~eE~~~Fe~~l~~yGKdf~~I~~~~v~~Kt~~~~v~fYY~wKkt~~y~q~~   63 (70)
T 2crg_A            4 GSSGMEEWSASEACLFEEALEKYGKDFNDIRQDFLPWKSLTSIIEYYYMWKTTDRYVQQK   63 (70)
T ss_dssp             CCCSSCCCCHHHHHHHHHHHHHTCSCHHHHHHTTCSSSCHHHHHHHHHHHHTCCSSCSCC
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHH
T ss_conf             544789989999999999999969649999999959997999999987104772699999


No 5  
>2eqr_A N-COR1, N-COR, nuclear receptor corepressor 1; SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=1.00  E-value=1  Score=117.55  Aligned_cols=56  Identities=41%  Similarity=0.769  Sum_probs=53.1

Q ss_pred             HHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCC
Q ss_conf             85303699999999999999997449887789733088996678888541156757
Q 000305          715 EKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDC  770 (1696)
Q Consensus       715 yKerq~in~WTEEEkeiF~EKylqhPKnFGkIAs~Lp~KTvsDCVlfYYltKKs~n  770 (1696)
                      .++++.++.||++|+++|.++|.+|||+|++||.+|+.||+.+||.|||+|||+.|
T Consensus         6 ~~~r~~~~~WT~eE~~~F~~~~~~~gk~w~~Ia~~l~~rt~~~~v~~Yy~~Kk~~n   61 (61)
T 2eqr_A            6 SGDRQFMNVWTDHEKEIFKDKFIQHPKNFGLIASYLERKSVPDCVLYYYLTKKNEN   61 (61)
T ss_dssp             CCCCSCCCSCCHHHHHHHHHHHHHSTTCHHHHHHHCTTSCHHHHHHHHHHHTCCCC
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCC
T ss_conf             33342589989999999999999968779999978499989999999988507789


No 6  
>2yqk_A Arginine-glutamic acid dipeptide repeats protein; structure genomics, SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=1.00  E-value=1  Score=110.64  Aligned_cols=54  Identities=31%  Similarity=0.552  Sum_probs=48.4

Q ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCHHHHHH-HCCCCCHHHHHHHHHHCCCCCCHH
Q ss_conf             369999999999999999744988778973-308899667888854115675738
Q 000305          719 AMINPWTSEEREIFVDKLATFGKDFRKIAS-FLNYKTTADCVEFYYKNHKSDCFE  772 (1696)
Q Consensus       719 q~in~WTEEEkeiF~EKylqhPKnFGkIAs-~Lp~KTvsDCVlfYYltKKs~nYK  772 (1696)
                      ...+.||++|+++|.+++.+|||+|++|+. +|+.||+.|||.|||+|||+.+.+
T Consensus         7 ~~~~~WT~eE~~~Fe~~l~~yGKdf~~I~~~~v~~Kt~~~~v~fYY~wKkt~~~~   61 (63)
T 2yqk_A            7 GIEKCWTEDEVKRFVKGLRQYGKNFFRIRKELLPNKETGELITFYYYWKKTSGPS   61 (63)
T ss_dssp             CCCCSCCHHHHHHHHHHHHHTCSCHHHHHHHSCTTSCHHHHHHHHHHHHCSSCCC
T ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCC
T ss_conf             5789869999999999999968439999999859976999899870553788877


No 7  
>2iw5_B Protein corest, REST corepressor 1; oxidoreductase-transcription regulator complex, oxidoreductase/repressor complex, histone demethylase, FAD; HET: FAD; 2.57A {Homo sapiens} SCOP: a.4.1.3 PDB: 2uxn_B* 2uxx_B* 2y48_B* 2v1d_B* 2x0l_B*
Probab=1.00  E-value=1  Score=99.29  Aligned_cols=64  Identities=19%  Similarity=0.415  Sum_probs=59.0

Q ss_pred             HHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHC
Q ss_conf             8530369999999999999999744988778973308899667888854115675738887310
Q 000305          715 EKERAMINPWTSEEREIFVDKLATFGKDFRKIASFLNYKTTADCVEFYYKNHKSDCFEKLKKKH  778 (1696)
Q Consensus       715 yKerq~in~WTEEEkeiF~EKylqhPKnFGkIAs~Lp~KTvsDCVlfYYltKKs~nYKkLlRk~  778 (1696)
                      +........||++|+++|.+++..|+|+|..||.+|+.||+.+|+.|||.|||..++.++++.+
T Consensus       127 e~~~k~s~~WTeEE~~lFleAl~kYGKDW~~IAk~VgTKT~~QcKnfY~~~kKRlnLD~ilke~  190 (235)
T 2iw5_B          127 EVIQKCNARWTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVNYRRRFNIDEVLQEW  190 (235)
T ss_dssp             CCCCCCCSSCCHHHHHHHHHHHHHHSSCHHHHHHHHSSCCHHHHHHHHHHTTTTTTHHHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             7777667998989999999999998868999997759999999999999999986689999999


No 8  
>2ltp_A Nuclear receptor corepressor 2; SMRT, TRAC, SGC, structural genomics consortium, NESG, north structural genomics consortium; NMR {Homo sapiens}
Probab=1.00  E-value=1  Score=92.38  Aligned_cols=61  Identities=28%  Similarity=0.422  Sum_probs=57.9

Q ss_pred             CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             9999999999999999999198969999782898999999999997887098755568788
Q 000305          936 DPSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLGLDLIHTGRGN  996 (1696)
Q Consensus       936 ~ssrWTdEEkelFleaL~kYGKDW~aIA~~VGTKTv~QcKsFY~kyRKrlnLD~il~e~~~  996 (1696)
                      ....||++|..+|++++.+||.+|..||.+|++||..|||++|++|.++++|+++++++..
T Consensus        15 ~~~~WT~eEd~~l~~~~~~~G~~W~~IA~~l~gRt~~q~k~r~~~~lrk~~l~~~~~e~~~   75 (89)
T 2ltp_A           15 YFQGWTEEEMGTAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNLDEILQQHKL   75 (89)


No 9  
>2eqr_A N-COR1, N-COR, nuclear receptor corepressor 1; SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=1.00  E-value=1  Score=91.99  Aligned_cols=50  Identities=28%  Similarity=0.515  Sum_probs=47.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHC
Q ss_conf             99999999999999999919896999978289899999999999788709
Q 000305          937 PSDWTDEEKSIFIQAVTSYGKDFSMIARCIRTRSRDQCKVFFSKARKCLG  986 (1696)
Q Consensus       937 ssrWTdEEkelFleaL~kYGKDW~aIA~~VGTKTv~QcKsFY~kyRKrln  986 (1696)
                      ...||++|+.+|++++.+||++|..||.+|++||+.||+.||+.++|+.|
T Consensus        12 ~~~WT~eE~~~F~~~~~~~gk~w~~Ia~~l~~rt~~~~v~~Yy~~Kk~~n   61 (61)
T 2eqr_A           12 MNVWTDHEKEIFKDKFIQHPKNFGLIASYLERKSVPDCVLYYYLTKKNEN   61 (61)
T ss_dssp             CCSCCHHHHHHHHHHHHHSTTCHHHHHHHCTTSCHHHHHHHHHHHTCCCC
T ss_pred             CCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCC
T ss_conf             89989999999999999968779999978499989999999988507789


No 10 
>2yqk_A Arginine-glutamic acid dipeptide repeats protein; structure genomics, SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=1.00  E-value=1  Score=91.62  Aligned_cols=50  Identities=24%  Similarity=0.511  Sum_probs=46.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHCCCHHHHHH-HHCCCCHHHHHHHHHHHHHHHC
Q ss_conf             9999999999999999991989699997-8289899999999999788709
Q 000305          937 PSDWTDEEKSIFIQAVTSYGKDFSMIAR-CIRTRSRDQCKVFFSKARKCLG  986 (1696)
Q Consensus       937 ssrWTdEEkelFleaL~kYGKDW~aIA~-~VGTKTv~QcKsFY~kyRKrln  986 (1696)
                      ...||++|+.+|.+||.+|||||..|++ +|++||+.||+.|||.|||..+
T Consensus         9 ~~~WT~eE~~~Fe~~l~~yGKdf~~I~~~~v~~Kt~~~~v~fYY~wKkt~~   59 (63)
T 2yqk_A            9 EKCWTEDEVKRFVKGLRQYGKNFFRIRKELLPNKETGELITFYYYWKKTSG   59 (63)
T ss_dssp             CCSCCHHHHHHHHHHHHHTCSCHHHHHHHSCTTSCHHHHHHHHHHHHCSSC
T ss_pred             CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCC
T ss_conf             898699999999999999684399999998599769998998705537888


Done!