Citrus Sinensis ID: 000313
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1679 | 2.2.26 [Sep-21-2011] | |||||||
| O59722 | 1932 | 1-phosphatidylinositol 3- | yes | no | 0.159 | 0.138 | 0.427 | 1e-61 | |
| P34756 | 2278 | 1-phosphatidylinositol 3- | yes | no | 0.155 | 0.114 | 0.432 | 3e-61 | |
| B0G126 | 2656 | 1-phosphatidylinositol 3- | yes | no | 0.151 | 0.096 | 0.461 | 3e-57 | |
| Q9Y2I7 | 2098 | 1-phosphatidylinositol 3- | yes | no | 0.168 | 0.134 | 0.405 | 3e-56 | |
| Q9Z1T6 | 2097 | 1-phosphatidylinositol 3- | yes | no | 0.168 | 0.134 | 0.405 | 4e-56 | |
| O96838 | 1809 | Putative 1-phosphatidylin | yes | no | 0.145 | 0.134 | 0.425 | 4e-48 | |
| P61112 | 548 | Thermosome subunit alpha | N/A | no | 0.135 | 0.416 | 0.270 | 4e-14 | |
| P61111 | 548 | Thermosome subunit alpha | yes | no | 0.135 | 0.416 | 0.270 | 4e-14 | |
| Q54TH8 | 530 | T-complex protein 1 subun | no | no | 0.134 | 0.424 | 0.262 | 1e-13 | |
| P48605 | 544 | T-complex protein 1 subun | no | no | 0.147 | 0.454 | 0.267 | 2e-13 |
| >sp|O59722|FAB1_SCHPO 1-phosphatidylinositol 3-phosphate 5-kinase fab1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fab1 PE=3 SV=2 | Back alignment and function desciption |
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Score = 239 bits (611), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/269 (42%), Positives = 170/269 (63%), Gaps = 2/269 (0%)
Query: 1386 GKGKYSVKCLYANQFRDLRSRCCPSELAYIDSLSRCRNWDAKGGKSKSFFVKTLDDRFII 1445
G + S K +A QF LR R C E ++ SL+RC W++ GGKS S F+KT D ++I+
Sbjct: 1654 GSARLSCKVFFAEQFSALR-RACGCEETFVTSLARCSLWESSGGKSGSAFLKTFDKKYIL 1712
Query: 1446 KEIKKTEFDSFDKFALHYFKYMNESFDSGNQTCLAKVLGIYQVTIRQPKSGKEMRHDLMV 1505
K + + E DS FA YF Y+++ F T L K+ G Y+V IR P +G + D+M+
Sbjct: 1713 KVLSRLESDSLLNFAPAYFDYISKVFFHELPTALTKIFGFYRVDIRNPTTGTICKTDIMI 1772
Query: 1506 MENLTFERNITRQYDLKGALHARYNTTVDGSGDVLLDQNFVNDMNSSPLYVSNTAKRILQ 1565
MEN+ ++ +R +DLKG++ R+ + +VLLD+N V + SP++VS K +L
Sbjct: 1773 MENVFYDECPSRIFDLKGSMRNRHVESTGKVDEVLLDENLVELIYESPIFVSEQLKSLLH 1832
Query: 1566 RAVWNDTTFLNSIDVMDYSLLVGVDSQRRELVCGIIDYLRQYTWDKHLETWVKSS-LVPK 1624
+WNDT FL+ +++MDYSL+VG+D ++EL GIID++R YTWDK LE+WVK LV +
Sbjct: 1833 SCLWNDTLFLSKLNIMDYSLIVGIDYTKKELYVGIIDFIRTYTWDKKLESWVKEKGLVGR 1892
Query: 1625 NVLPTVISPKDYKRRFRKFMSTHFLSVPD 1653
PT+++PK YK RFRK M + L+ D
Sbjct: 1893 GPEPTIVTPKQYKNRFRKAMDCYILASQD 1921
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The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2) (By similarity). Catalyzes the phosphorylation of phosphatidylinositol 3-phosphate on the fifth hydroxyl of the myo-inositol ring, to form phosphatidylinositol 3,5-bisphosphate. Required for endocytic-vacuolar pathway and nuclear migration. The product of the reaction it catalyzes functions as an important regulator of vacuole homeostasis perhaps by controlling membrane flux to and/or from the vacuole (By similarity). Required for survival under conditions of nitrogen starvation. May have a role in the secretion of pheromone peptides. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1EC: 5EC: 0 |
| >sp|P34756|FAB1_YEAST 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FAB1 PE=1 SV=3 | Back alignment and function description |
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| >sp|B0G126|FYV1_DICDI 1-phosphatidylinositol 3-phosphate 5-kinase OS=Dictyostelium discoideum GN=pip5k3 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q9Y2I7|FYV1_HUMAN 1-phosphatidylinositol 3-phosphate 5-kinase OS=Homo sapiens GN=PIKFYVE PE=1 SV=3 | Back alignment and function description |
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| >sp|Q9Z1T6|FYV1_MOUSE 1-phosphatidylinositol 3-phosphate 5-kinase OS=Mus musculus GN=Pikfyve PE=1 SV=3 | Back alignment and function description |
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| >sp|O96838|FYV1_DROME Putative 1-phosphatidylinositol 3-phosphate 5-kinase OS=Drosophila melanogaster GN=fab1 PE=1 SV=2 | Back alignment and function description |
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| >sp|P61112|THSA_THEK1 Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA PE=1 SV=1 | Back alignment and function description |
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| >sp|P61111|THSA_PYRKO Thermosome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=thsA PE=3 SV=1 | Back alignment and function description |
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| >sp|Q54TH8|TCPG_DICDI T-complex protein 1 subunit gamma OS=Dictyostelium discoideum GN=cct3 PE=1 SV=1 | Back alignment and function description |
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| >sp|P48605|TCPG_DROME T-complex protein 1 subunit gamma OS=Drosophila melanogaster GN=Cctgamma PE=2 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1679 | ||||||
| 224146449 | 1387 | predicted protein [Populus trichocarpa] | 0.821 | 0.994 | 0.649 | 0.0 | |
| 255585234 | 1569 | phosphatidylinositol-4-phosphate 5-kinas | 0.926 | 0.991 | 0.605 | 0.0 | |
| 147788261 | 1517 | hypothetical protein VITISV_042325 [Viti | 0.888 | 0.982 | 0.610 | 0.0 | |
| 356574577 | 1594 | PREDICTED: uncharacterized protein LOC10 | 0.944 | 0.994 | 0.571 | 0.0 | |
| 359493066 | 1601 | PREDICTED: uncharacterized protein LOC10 | 0.693 | 0.727 | 0.613 | 0.0 | |
| 449444198 | 1517 | PREDICTED: uncharacterized protein LOC10 | 0.891 | 0.986 | 0.490 | 0.0 | |
| 15218566 | 1456 | protein FAB1D [Arabidopsis thaliana] gi| | 0.780 | 0.899 | 0.507 | 0.0 | |
| 297846424 | 1450 | phosphatidylinositol-4-phosphate 5-kinas | 0.778 | 0.901 | 0.503 | 0.0 | |
| 356534009 | 1541 | PREDICTED: uncharacterized protein LOC10 | 0.673 | 0.733 | 0.550 | 0.0 | |
| 115474367 | 1610 | Os08g0104700 [Oryza sativa Japonica Grou | 0.846 | 0.882 | 0.432 | 0.0 |
| >gi|224146449|ref|XP_002326011.1| predicted protein [Populus trichocarpa] gi|222862886|gb|EEF00393.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 1858 bits (4812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 955/1471 (64%), Positives = 1135/1471 (77%), Gaps = 91/1471 (6%)
Query: 189 NDNEMDMQIWEPPEPEDPEDDIEGSIAYNDDDEDEECGDGTKWGKPSSLSHFRDEGGGRL 248
+D+E+D Q+WEPPE EDPEDD++GS+A+ DDD+ +ECGDGT+WGKPSSLS+ RDEG
Sbjct: 5 SDDEVDAQVWEPPEAEDPEDDLDGSVAFIDDDD-DECGDGTEWGKPSSLSYSRDEGSRSF 63
Query: 249 KFKEEKQRAMEKVVSGKFKAIVSQLLKSVGVVSSGKDGESWVDIVTSLSWEAASSLRPGS 308
KFKEEKQ+AM++VV+ KFKA+VSQLLK+ GV S +DGESWVDIVT LSWEAAS L+P +
Sbjct: 64 KFKEEKQKAMDEVVNVKFKAVVSQLLKTAGVASLMRDGESWVDIVTYLSWEAASFLKPEA 123
Query: 309 VDGKSLDLNSYIKVKCIAAGSRNQSQIIKGLVFKKHAAHKHMPTEYKNPRLLLIRGVLGL 368
+D K++D + Y+KVKCIA GSR++S+++KGLVFKK AAHKHMPT+YKNPRLLLI+GVLG
Sbjct: 124 IDRKAMDPDGYVKVKCIATGSRSESEVVKGLVFKKRAAHKHMPTKYKNPRLLLIQGVLGQ 183
Query: 369 SSSGLSSFKAMEQEKDQLKSVMDMIDMCHPNVVLVEKTVSRDIQESILEKGMTLVFDMKL 428
SSSGLSSFK+MEQ D L+++++ I+MCHPNVVLVEK+VSRD+QE IL KGMTLV+DMKL
Sbjct: 184 SSSGLSSFKSMEQ--DNLRALIETIEMCHPNVVLVEKSVSRDVQECILAKGMTLVYDMKL 241
Query: 429 HRLERVARCTGSPILSSGSLTSQKLKHCDSFYIKKFVEEHAGFREGGKRPSKTLMFIEGC 488
HRLER+ARCTGSPIL S +L +QKLK CDSF+I++FVEEH EGGK+P KTLMFIEGC
Sbjct: 242 HRLERIARCTGSPILLSDALMNQKLKQCDSFHIERFVEEHVVVCEGGKKPRKTLMFIEGC 301
Query: 489 PTRLGCTVLLKGSNSDELKRIKSVVQCAVVMAYHLILETSFLVDQRAMFSTIPFAEVAGI 548
PT LGCT+LLKGS+SDELKR+K VVQ AV+MAYH+ILETSFLVD +AMFS+ F V
Sbjct: 302 PTCLGCTILLKGSHSDELKRVKYVVQFAVIMAYHMILETSFLVDWKAMFSSEIFGGVVNT 361
Query: 549 LPMEQQHPALENGNSNVSCFEHSSVESGSSTMDIPISNGFHEDGSY-ANSGPEGESILSY 607
++Q ALE + + C E S+ E+GSS +DIPISNGFHE+GS+ N G EG
Sbjct: 362 SSIDQHSSALE---TRIPCVEESTTETGSSIIDIPISNGFHEEGSHNINIGLEG------ 412
Query: 608 EPYNPAVFSGFSSLSASLRKVIGDNFPLSSAAAYPSLTSYFGFRGREQSGQITEDVPVST 667
Y PAVFSGFSSLSASL+KV+GD+FPL S++ Y SL+ YFGF G+E +GQI E+VPV
Sbjct: 413 --YEPAVFSGFSSLSASLKKVMGDSFPLVSSSPYRSLSDYFGFIGQETNGQIMEEVPVLK 470
Query: 668 IMDASLDGPCDTEAKSSSDEEKSL-DGQPTSLPSCPEAPLSMGKDCGNDEDHSQSQEDAN 726
++A P D E K SDEEKS DGQP SL A L G D GN ED QS+ DAN
Sbjct: 471 TLEAF--DPSDMEGKKDSDEEKSANDGQPQSLSPYSVATLDSGNDVGNKEDQIQSKGDAN 528
Query: 727 ASLDSQSILVLMSSRNALRGTICEQSHFSHIMFYKNFDVPLGKFLQDNLLNQRKQCASCS 786
A LDSQSILVLMS RNALRG ICEQSHFSHIMFY+NFDVPLGKFL+DNLLNQR QC +C
Sbjct: 529 AVLDSQSILVLMSRRNALRGIICEQSHFSHIMFYRNFDVPLGKFLRDNLLNQRSQCNTCG 588
Query: 787 ELPEAHFYYYARHNKQLTIRVKRLPDRIRLSGEAEGKLWMWSRCGRCKTANGVPKSTKRV 846
ELPEAHFYYYA HNKQLTI+VKRL L GE EGKLWMW RCG+CK + +PKSTKRV
Sbjct: 589 ELPEAHFYYYAHHNKQLTIQVKRLFK--TLPGEGEGKLWMWIRCGKCKHESRLPKSTKRV 646
Query: 847 VISTAACGLSFGKFLELSFSHHSSSTRLSSCGHSLHRDFLYFFGLGPMVGMFKYSPFTTY 906
+ISTAA LSFGKFLE+SFSH SS L SCGHSL RDFLYFFGLGPM MFKYSP TTY
Sbjct: 647 LISTAARSLSFGKFLEISFSHQFSSGSLFSCGHSLERDFLYFFGLGPMAAMFKYSPVTTY 706
Query: 907 NMCVPPQKLEFSNSIN-KWLKEEFQNVYTKGILLFSEVESSLKQIGSRFVGSTLNLQGSL 965
N+ +PPQKLEF +SI LK+EF VY+KG+L+F+ V +LK + SRF GS LNLQGSL
Sbjct: 707 NVSLPPQKLEFYHSIRLDGLKKEFHAVYSKGMLIFNGVGEALKNLRSRFAGSVLNLQGSL 766
Query: 966 KEFSVTSEILKQERSVFEVDIQKTVAKKVHSDEALHKLLSLNRLRWELLIESCIWDRRLH 1025
KEFS ++LKQE S FE++IQ VAK + DEA++KLLSLN+L WELL+ESCIW+RRLH
Sbjct: 767 KEFSDIEDMLKQESSEFELNIQNAVAK--NGDEAVYKLLSLNQLSWELLLESCIWERRLH 824
Query: 1026 SLLLPDPTVVITGATEKPGPEQTKVKMDGTTAKGNEVPEPEVDSGNGDNVSNNFGNLEVL 1085
SLLLPD +++TGA++K EQ + +M T ++ + G+ D VS+N GNL +
Sbjct: 825 SLLLPDTLMLVTGASKKELQEQFESQM--TDTADGKIQWNDNTLGSSDEVSDNSGNLRDM 882
Query: 1086 PDVAAEADELVVKEIPIDGPDRESGERDHKKTTVLKDVETSIASDLSSTSLANEDSMVRS 1145
EA E +KEIP+D E ++D+ T+ +++A D+ RS
Sbjct: 883 LSTTVEASEFSIKEIPVDDHVHEFKKQDNLYTS------SAVAEDIE-----------RS 925
Query: 1146 NVSDYLSGDDNVQAGKFLMSENLQVDKVVPNSQYLANSGSVVDPNASKNETSTHSLLSDL 1205
VS V++ +P + + +S S VD ++ K TS SL S +
Sbjct: 926 RVS---------------------VERTIPITTSIGSSDSFVDFDSIKKGTSARSLASSI 964
Query: 1206 EKLNGWFWMPFSELQQIYMKDLQRGFVPKFECVSRYTPEHLPTVYQLISEEGTRMHIPLG 1265
E NGWFWMPF E++QIYMKDLQRGF+PKF+ +S EH+ +QLI++E R+HIPLG
Sbjct: 965 ENSNGWFWMPFPEIRQIYMKDLQRGFMPKFQPISSNIQEHMSAAHQLITKECQRLHIPLG 1024
Query: 1266 AENYMVSDYEGELSSIIACALAVLKEMPLSTVVFNEDSGRDGDMAVKTIDSLRSLTRIPT 1325
+NYMV DY+ ELSSIIACALA LK++ LTRIPT
Sbjct: 1025 TDNYMVKDYDDELSSIIACALAFLKDI---------------------------LTRIPT 1057
Query: 1326 MASSLWSVNGSSDSDSIYASLSISSEDSRFSSFDGLNLLESLIPPEVLSPEVSIGISKSL 1385
M S WS NG SDSDS+++ L+ISS++SR SSFDGLNLLESL+ PE LSPEV+ G SKSL
Sbjct: 1058 MISPHWSSNG-SDSDSVHSMLNISSDESRLSSFDGLNLLESLVRPENLSPEVAFGRSKSL 1116
Query: 1386 GKGKYSVKCLYANQFRDLRSRCCPSELAYIDSLSRCRNWDAKGGKSKSFFVKTLDDRFII 1445
GKGKYSV CLYA QF DLR+RCCPSEL YI SLSRC+NWDAKGGKSKSFF KTLDDRFII
Sbjct: 1117 GKGKYSVICLYAKQFHDLRNRCCPSELDYIASLSRCKNWDAKGGKSKSFFAKTLDDRFII 1176
Query: 1446 KEIKKTEFDSFDKFALHYFKYMNESFDSGNQTCLAKVLGIYQVTIRQPKSGKEMRHDLMV 1505
KEIKKTEF+SF KFA HYFKYMNESF+SGNQTCLAKVLGIYQV +RQ KSGKE++HDLMV
Sbjct: 1177 KEIKKTEFESFVKFAPHYFKYMNESFESGNQTCLAKVLGIYQVILRQTKSGKEIKHDLMV 1236
Query: 1506 MENLTFERNITRQYDLKGALHARYNTTVDGSGDVLLDQNFVNDMNSSPLYVSNTAKRILQ 1565
MENLTF RNITRQYDLKGALHARYN+ DGSGDVLLDQNFV+DMNSSPLYVSNTAKR+L+
Sbjct: 1237 MENLTFGRNITRQYDLKGALHARYNSAADGSGDVLLDQNFVDDMNSSPLYVSNTAKRLLE 1296
Query: 1566 RAVWNDTTFLNSIDVMDYSLLVGVDSQRRELVCGIIDYLRQYTWDKHLETWVKSSLVPKN 1625
RAVWNDTTFLNSI+VMDYSLLVGVD+QRR LVCGIIDYLRQYTWDK LETWVKSSLVPKN
Sbjct: 1297 RAVWNDTTFLNSINVMDYSLLVGVDTQRRVLVCGIIDYLRQYTWDKQLETWVKSSLVPKN 1356
Query: 1626 VLPTVISPKDYKRRFRKFMSTHFLSVPDHWC 1656
+LPTVISP +YK+RFRKFM+ HFLSVP++WC
Sbjct: 1357 LLPTVISPIEYKKRFRKFMTAHFLSVPENWC 1387
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255585234|ref|XP_002533319.1| phosphatidylinositol-4-phosphate 5-kinase, putative [Ricinus communis] gi|223526863|gb|EEF29076.1| phosphatidylinositol-4-phosphate 5-kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|147788261|emb|CAN65296.1| hypothetical protein VITISV_042325 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356574577|ref|XP_003555422.1| PREDICTED: uncharacterized protein LOC100809696 [Glycine max] | Back alignment and taxonomy information |
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| >gi|359493066|ref|XP_002270311.2| PREDICTED: uncharacterized protein LOC100242669 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449444198|ref|XP_004139862.1| PREDICTED: uncharacterized protein LOC101202759 [Cucumis sativus] gi|449525806|ref|XP_004169907.1| PREDICTED: uncharacterized LOC101202759 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|15218566|ref|NP_174686.1| protein FAB1D [Arabidopsis thaliana] gi|5091620|gb|AAD39608.1|AC007454_7 Contains similarity to gi|836774 FAB1 protein from Saccharomyces cerevisiae genome gb|D50617 [Arabidopsis thaliana] gi|332193569|gb|AEE31690.1| protein FAB1D [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297846424|ref|XP_002891093.1| phosphatidylinositol-4-phosphate 5-kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297336935|gb|EFH67352.1| phosphatidylinositol-4-phosphate 5-kinase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|356534009|ref|XP_003535550.1| PREDICTED: uncharacterized protein LOC100815340 [Glycine max] | Back alignment and taxonomy information |
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| >gi|115474367|ref|NP_001060780.1| Os08g0104700 [Oryza sativa Japonica Group] gi|42407781|dbj|BAD08926.1| phosphatidylinositol 3,5-kinase-like [Oryza sativa Japonica Group] gi|113622749|dbj|BAF22694.1| Os08g0104700 [Oryza sativa Japonica Group] gi|222639769|gb|EEE67901.1| hypothetical protein OsJ_25744 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1679 | ||||||
| TAIR|locus:2026109 | 1456 | FAB1D "FORMS APLOID AND BINUCL | 0.175 | 0.202 | 0.744 | 0.0 | |
| TAIR|locus:2091050 | 1791 | FAB1B "FORMS APLOID AND BINUCL | 0.603 | 0.565 | 0.324 | 6.5e-221 | |
| TAIR|locus:2125884 | 1757 | FAB1A "FORMS APLOID AND BINUCL | 0.178 | 0.170 | 0.592 | 1.5e-203 | |
| TAIR|locus:2013965 | 1648 | FAB1C "FORMS APLOID AND BINUCL | 0.169 | 0.172 | 0.581 | 2.1e-196 | |
| ZFIN|ZDB-GENE-030131-9636 | 2100 | pikfyve "phosphoinositide kina | 0.166 | 0.133 | 0.416 | 5.6e-93 | |
| UNIPROTKB|F1N2K7 | 2102 | PIKFYVE "Uncharacterized prote | 0.168 | 0.134 | 0.412 | 6.2e-91 | |
| SGD|S000001915 | 2278 | FAB1 "1-phosphatidylinositol-3 | 0.157 | 0.115 | 0.448 | 1.8e-90 | |
| UNIPROTKB|F1SST9 | 2105 | PIKFYVE "Uncharacterized prote | 0.168 | 0.134 | 0.412 | 2.6e-90 | |
| UNIPROTKB|Q9Y2I7 | 2098 | PIKFYVE "1-phosphatidylinosito | 0.168 | 0.134 | 0.412 | 3.2e-90 | |
| UNIPROTKB|F1PXC7 | 2100 | PIKFYVE "Uncharacterized prote | 0.168 | 0.134 | 0.412 | 5.2e-90 |
| TAIR|locus:2026109 FAB1D "FORMS APLOID AND BINUCLEATE CELLS 1A" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1154 (411.3 bits), Expect = 0., Sum P(5) = 0.
Identities = 224/301 (74%), Positives = 250/301 (83%)
Query: 1359 DGLNLLESLIPPEVLSPEVSIGISKSLGKGKYSVKCLYANQFRDLRSRCCPSELAYIDSL 1418
+ N LE+L PPEVL V+ G KS+GK KYS+ LYA+ FRDLR RCC SEL YI SL
Sbjct: 1154 ESTNRLETLPPPEVL---VTFGSVKSVGKPKYSIVSLYADDFRDLRKRCCSSELDYIASL 1210
Query: 1419 SRCRNWDAKGGKSKSFFVKTLDDRFIIKEIKKTEFDSFDKFALHYFKYMNESFDSGNQTC 1478
SRC+ WDAKGGKSKS F KTLDDRFI+KEIKKTE++SF FA YFKYM +S+D GNQTC
Sbjct: 1211 SRCKPWDAKGGKSKSVFAKTLDDRFIVKEIKKTEYESFVTFATEYFKYMKDSYDLGNQTC 1270
Query: 1479 LAKVLGIYQVTIRQPKSG-KEMRHDLMVMENLTFERNITRQYDLKGALHARYN-TTVDGS 1536
LAKVLGI+QVT+RQPK G KE+RHDLMVMENL+F R +TRQYDLKGALHAR+ T+ +G
Sbjct: 1271 LAKVLGIHQVTVRQPKGGGKEIRHDLMVMENLSFSRKVTRQYDLKGALHARFTATSANGE 1330
Query: 1537 GDVLLDQNFVNDMNSSPLYVSNTAKRILQRAVWNDTTFLNSIDVMDYSLLVGVDSQRREL 1596
DVLLDQNFVNDMN SPLYVS T+K+ LQRAV+NDT+FL SI+VMDYSLLVGVD + EL
Sbjct: 1331 DDVLLDQNFVNDMNKSPLYVSKTSKQNLQRAVYNDTSFLTSINVMDYSLLVGVDDENHEL 1390
Query: 1597 VCGIIDYLRQYTWDKHLETWVKSSLV-PKNVLPTVISPKDYKRRFRKFMSTHFLSVPDHW 1655
VCGIIDYLRQYTWDK LETWVKSSLV PKNV PTVISP DYK RFRKFM THFL VPD W
Sbjct: 1391 VCGIIDYLRQYTWDKQLETWVKSSLVVPKNVQPTVISPIDYKTRFRKFMKTHFLCVPDQW 1450
Query: 1656 C 1656
C
Sbjct: 1451 C 1451
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| TAIR|locus:2091050 FAB1B "FORMS APLOID AND BINUCLEATE CELLS 1B" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2125884 FAB1A "FORMS APLOID AND BINUCLEATE CELLS 1A" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2013965 FAB1C "FORMS APLOID AND BINUCLEATE CELLS 1C" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-030131-9636 pikfyve "phosphoinositide kinase, FYVE finger containing" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1N2K7 PIKFYVE "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| SGD|S000001915 FAB1 "1-phosphatidylinositol-3-phosphate 5-kinase" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1SST9 PIKFYVE "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9Y2I7 PIKFYVE "1-phosphatidylinositol 3-phosphate 5-kinase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1PXC7 PIKFYVE "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.7.1 | 0.691 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1679 | |||
| cd03334 | 261 | cd03334, Fab1_TCP, TCP-1 like domain of the eukary | 1e-103 | |
| cd00139 | 313 | cd00139, PIPKc, Phosphatidylinositol phosphate kin | 9e-90 | |
| pfam01504 | 255 | pfam01504, PIP5K, Phosphatidylinositol-4-phosphate | 5e-74 | |
| smart00330 | 342 | smart00330, PIPKc, Phosphatidylinositol phosphate | 1e-54 | |
| COG5253 | 612 | COG5253, MSS4, Phosphatidylinositol-4-phosphate 5- | 1e-52 | |
| cd03333 | 209 | cd03333, chaperonin_like, chaperonin_like superfam | 2e-44 | |
| pfam00118 | 481 | pfam00118, Cpn60_TCP1, TCP-1/cpn60 chaperonin fami | 2e-22 | |
| cd00309 | 464 | cd00309, chaperonin_type_I_II, chaperonin families | 2e-19 | |
| TIGR02344 | 525 | TIGR02344, chap_CCT_gamma, T-complex protein 1, ga | 4e-18 | |
| TIGR02339 | 519 | TIGR02339, thermosome_arch, thermosome, various su | 3e-15 | |
| smart00330 | 342 | smart00330, PIPKc, Phosphatidylinositol phosphate | 8e-15 | |
| cd03343 | 517 | cd03343, cpn60, cpn60 chaperonin family | 1e-13 | |
| PLN03185 | 765 | PLN03185, PLN03185, phosphatidylinositol phosphate | 1e-12 | |
| cd03337 | 480 | cd03337, TCP1_gamma, TCP-1 (CTT or eukaryotic type | 1e-09 | |
| TIGR02345 | 523 | TIGR02345, chap_CCT_eta, T-complex protein 1, eta | 4e-07 | |
| cd03340 | 522 | cd03340, TCP1_eta, TCP-1 (CTT or eukaryotic type I | 7e-07 | |
| cd03338 | 515 | cd03338, TCP1_delta, TCP-1 (CTT or eukaryotic type | 3e-06 | |
| cd03335 | 527 | cd03335, TCP1_alpha, TCP-1 (CTT or eukaryotic type | 3e-06 | |
| cd03342 | 484 | cd03342, TCP1_zeta, TCP-1 (CTT or eukaryotic type | 3e-06 | |
| TIGR02342 | 517 | TIGR02342, chap_CCT_delta, T-complex protein 1, de | 3e-06 | |
| COG0459 | 524 | COG0459, GroL, Chaperonin GroEL (HSP60 family) [Po | 3e-06 | |
| TIGR02340 | 536 | TIGR02340, chap_CCT_alpha, T-complex protein 1, al | 4e-05 | |
| cd03339 | 526 | cd03339, TCP1_epsilon, TCP-1 (CTT or eukaryotic ty | 3e-04 | |
| TIGR02343 | 532 | TIGR02343, chap_CCT_epsi, T-complex protein 1, eps | 4e-04 |
| >gnl|CDD|239450 cd03334, Fab1_TCP, TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1 | Back alignment and domain information |
|---|
Score = 329 bits (846), Expect = e-103
Identities = 124/273 (45%), Positives = 180/273 (65%), Gaps = 17/273 (6%)
Query: 267 KAIVSQLLKSVGVVSSGKDGESWVDIVTSLSWEAASSLRPGSVDGKSLDLNSYIKVKCIA 326
+A+++QLLK + ESW+DI+ L W+AAS+++P G +D+ Y+K+K I
Sbjct: 1 RALLAQLLKD----EGISNDESWLDILLPLVWKAASNVKPDVRAGDDMDIRQYVKIKKIP 56
Query: 327 AGSRNQSQIIKGLVFKKHAAHKHMPTEYKNPRLLLIRGVLGLS--SSGLSSFKAM-EQEK 383
GS + S+++ G+VF K+ AHK MP++ KNPR+LL++G L + L S + QEK
Sbjct: 57 GGSPSDSEVVDGVVFTKNVAHKRMPSKIKNPRILLLQGPLEYQRVENKLLSLDPVILQEK 116
Query: 384 DQLKSVMDMIDMCHPNVVLVEKTVSRDIQESILEKGMTLVFDMKLHRLERVARCTGSPIL 443
+ LK+++ I P+V+LVEK+VSR Q+ +LE G+TLV ++K LER++RCTG+ I+
Sbjct: 117 EYLKNLVSRIVALRPDVILVEKSVSRIAQDLLLEAGITLVLNVKPSVLERISRCTGADII 176
Query: 444 SSG--SLTSQKLKHCDSFYIKKFVEEHAGFREGGKRPSKTLMFIEGCPTRLGCTVLLKGS 501
SS LTS KL C+SF ++ +VEEH SKTLMF EGCP LGCT+LL+G
Sbjct: 177 SSMDDLLTSPKLGTCESFRVRTYVEEH--------GRSKTLMFFEGCPKELGCTILLRGG 228
Query: 502 NSDELKRIKSVVQCAVVMAYHLILETSFLVDQR 534
+ +ELK++K VV+ V AYHL LETSFL D+
Sbjct: 229 DLEELKKVKRVVEFMVFAAYHLKLETSFLADEF 261
|
Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this domain leads to loss of catalytic activity. However no exact function this domain has been defined. In general, chaperonins are involved in productive folding of proteins. Length = 261 |
| >gnl|CDD|238081 cd00139, PIPKc, Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate | Back alignment and domain information |
|---|
| >gnl|CDD|216538 pfam01504, PIP5K, Phosphatidylinositol-4-phosphate 5-Kinase | Back alignment and domain information |
|---|
| >gnl|CDD|214623 smart00330, PIPKc, Phosphatidylinositol phosphate kinases | Back alignment and domain information |
|---|
| >gnl|CDD|227578 COG5253, MSS4, Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >gnl|CDD|239449 cd03333, chaperonin_like, chaperonin_like superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|215730 pfam00118, Cpn60_TCP1, TCP-1/cpn60 chaperonin family | Back alignment and domain information |
|---|
| >gnl|CDD|238189 cd00309, chaperonin_type_I_II, chaperonin families, type I and type II | Back alignment and domain information |
|---|
| >gnl|CDD|233825 TIGR02344, chap_CCT_gamma, T-complex protein 1, gamma subunit | Back alignment and domain information |
|---|
| >gnl|CDD|233823 TIGR02339, thermosome_arch, thermosome, various subunits, archaeal | Back alignment and domain information |
|---|
| >gnl|CDD|214623 smart00330, PIPKc, Phosphatidylinositol phosphate kinases | Back alignment and domain information |
|---|
| >gnl|CDD|239459 cd03343, cpn60, cpn60 chaperonin family | Back alignment and domain information |
|---|
| >gnl|CDD|215619 PLN03185, PLN03185, phosphatidylinositol phosphate kinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|239453 cd03337, TCP1_gamma, TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit | Back alignment and domain information |
|---|
| >gnl|CDD|200176 TIGR02345, chap_CCT_eta, T-complex protein 1, eta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|239456 cd03340, TCP1_eta, TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|239454 cd03338, TCP1_delta, TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|239451 cd03335, TCP1_alpha, TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit | Back alignment and domain information |
|---|
| >gnl|CDD|239458 cd03342, TCP1_zeta, TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|233824 TIGR02342, chap_CCT_delta, T-complex protein 1, delta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|223535 COG0459, GroL, Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|131393 TIGR02340, chap_CCT_alpha, T-complex protein 1, alpha subunit | Back alignment and domain information |
|---|
| >gnl|CDD|239455 cd03339, TCP1_epsilon, TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit | Back alignment and domain information |
|---|
| >gnl|CDD|131396 TIGR02343, chap_CCT_epsi, T-complex protein 1, epsilon subunit | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1679 | |||
| KOG0230 | 1598 | consensus Phosphatidylinositol-4-phosphate 5-kinas | 100.0 | |
| cd00139 | 313 | PIPKc Phosphatidylinositol phosphate kinases (PIPK | 100.0 | |
| COG5253 | 612 | MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Si | 100.0 | |
| smart00330 | 342 | PIPKc Phosphatidylinositol phosphate kinases. | 100.0 | |
| KOG0229 | 420 | consensus Phosphatidylinositol-4-phosphate 5-kinas | 100.0 | |
| PF01504 | 252 | PIP5K: Phosphatidylinositol-4-phosphate 5-Kinase; | 100.0 | |
| PLN03185 | 765 | phosphatidylinositol phosphate kinase; Provisional | 100.0 | |
| cd03334 | 261 | Fab1_TCP TCP-1 like domain of the eukaryotic phosp | 100.0 | |
| TIGR02344 | 525 | chap_CCT_gamma T-complex protein 1, gamma subunit. | 100.0 | |
| KOG0364 | 527 | consensus Chaperonin complex component, TCP-1 gamm | 100.0 | |
| TIGR02339 | 519 | thermosome_arch thermosome, various subunits, arch | 100.0 | |
| cd03343 | 517 | cpn60 cpn60 chaperonin family. Chaperonins are inv | 100.0 | |
| cd03339 | 526 | TCP1_epsilon TCP-1 (CTT or eukaryotic type II) cha | 100.0 | |
| cd03335 | 527 | TCP1_alpha TCP-1 (CTT or eukaryotic type II) chape | 100.0 | |
| cd03340 | 522 | TCP1_eta TCP-1 (CTT or eukaryotic type II) chapero | 100.0 | |
| PTZ00212 | 533 | T-complex protein 1 subunit beta; Provisional | 100.0 | |
| TIGR02343 | 532 | chap_CCT_epsi T-complex protein 1, epsilon subunit | 100.0 | |
| cd03333 | 209 | chaperonin_like chaperonin_like superfamily. Chape | 100.0 | |
| cd03336 | 517 | TCP1_beta TCP-1 (CTT or eukaryotic type II) chaper | 100.0 | |
| cd03338 | 515 | TCP1_delta TCP-1 (CTT or eukaryotic type II) chape | 100.0 | |
| TIGR02342 | 517 | chap_CCT_delta T-complex protein 1, delta subunit. | 100.0 | |
| cd03337 | 480 | TCP1_gamma TCP-1 (CTT or eukaryotic type II) chape | 100.0 | |
| TIGR02340 | 536 | chap_CCT_alpha T-complex protein 1, alpha subunit. | 100.0 | |
| TIGR02347 | 531 | chap_CCT_zeta T-complex protein 1, zeta subunit. M | 100.0 | |
| TIGR02345 | 522 | chap_CCT_eta T-complex protein 1, eta subunit. Mem | 100.0 | |
| KOG0361 | 543 | consensus Chaperonin complex component, TCP-1 eta | 100.0 | |
| TIGR02341 | 519 | chap_CCT_beta T-complex protein 1, beta subunit. M | 100.0 | |
| cd03342 | 484 | TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaper | 100.0 | |
| cd00309 | 464 | chaperonin_type_I_II chaperonin families, type I a | 99.98 | |
| TIGR02346 | 531 | chap_CCT_theta T-complex protein 1, theta subunit. | 99.98 | |
| PF00118 | 485 | Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperon | 99.97 | |
| KOG0358 | 534 | consensus Chaperonin complex component, TCP-1 delt | 99.97 | |
| cd03341 | 472 | TCP1_theta TCP-1 (CTT or eukaryotic type II) chape | 99.97 | |
| KOG0363 | 527 | consensus Chaperonin complex component, TCP-1 beta | 99.97 | |
| KOG0360 | 545 | consensus Chaperonin complex component, TCP-1 alph | 99.96 | |
| KOG0359 | 520 | consensus Chaperonin complex component, TCP-1 zeta | 99.96 | |
| COG0459 | 524 | GroL Chaperonin GroEL (HSP60 family) [Posttranslat | 99.95 | |
| KOG0362 | 537 | consensus Chaperonin complex component, TCP-1 thet | 99.92 | |
| PRK12849 | 542 | groEL chaperonin GroEL; Reviewed | 99.91 | |
| cd03344 | 520 | GroEL GroEL_like type I chaperonin. Chaperonins ar | 99.91 | |
| PRK00013 | 542 | groEL chaperonin GroEL; Reviewed | 99.91 | |
| PTZ00114 | 555 | Heat shock protein 60; Provisional | 99.9 | |
| PRK12851 | 541 | groEL chaperonin GroEL; Reviewed | 99.9 | |
| TIGR02348 | 524 | GroEL chaperonin GroL. This family consists of Gro | 99.9 | |
| PRK12850 | 544 | groEL chaperonin GroEL; Reviewed | 99.89 | |
| PRK12852 | 545 | groEL chaperonin GroEL; Reviewed | 99.88 | |
| CHL00093 | 529 | groEL chaperonin GroEL | 99.86 | |
| PRK14104 | 546 | chaperonin GroEL; Provisional | 99.85 | |
| PLN03167 | 600 | Chaperonin-60 beta subunit; Provisional | 99.84 | |
| KOG0357 | 400 | consensus Chaperonin complex component, TCP-1 epsi | 99.79 | |
| KOG0230 | 1598 | consensus Phosphatidylinositol-4-phosphate 5-kinas | 95.52 | |
| KOG0356 | 550 | consensus Mitochondrial chaperonin, Cpn60/Hsp60p [ | 93.75 |
| >KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-235 Score=2192.89 Aligned_cols=1326 Identities=41% Similarity=0.651 Sum_probs=968.2
Q ss_pred CCCccCCC--cccCCCCCCCCcccccccccCCCCccccCCCCCCcCC---cCCCCCCcccCCCcccchHHHHHHHHHHHH
Q 000313 189 NDNEMDMQ--IWEPPEPEDPEDDIEGSIAYNDDDEDEECGDGTKWGK---PSSLSHFRDEGGGRLKFKEEKQRAMEKVVS 263 (1679)
Q Consensus 189 ~~~d~~~~--~w~pp~p~~~~d~~~~~~~~ddd~~~~~~~~~~~~~~---~ss~~~~~~~~~~~~~~~~~~~~~L~~~~~ 263 (1679)
+++||+++ +|.||+||+|+||+|+.++|+||+++| .++.|++ +.+++.+.....+ +..++..+.|+++..
T Consensus 232 ~~~d~~~~~~~~~p~~pene~dd~~~~~~~~~~~~~D---~~~~~~~~~~s~s~s~~~~~~~~--~~~ee~~~~m~~~~~ 306 (1598)
T KOG0230|consen 232 EILDFENNGLLWEPPEPENEEDDAESVLADDDDDEGD---TSGKWNPLRLSNSFSAPEYKSKD--KSAEEDEKVMRNVVE 306 (1598)
T ss_pred cccchhhccCCCCCCCCCcccccchhccccccccccc---cccccccccccCccCCCCccccc--cchhhcchhhhcccc
Confidence 78999999 999999999999999988775555433 2367876 6788887555555 688899999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCC-CchhHHHHHHHHHHHHHhhcCCCCCCCCccCcccceeEEEccCCCCCCceeEEeEEEe
Q 000313 264 GKFKAIVSQLLKSVGVVSSGK-DGESWVDIVTSLSWEAASSLRPGSVDGKSLDLNSYIKVKCIAAGSRNQSQIIKGLVFK 342 (1679)
Q Consensus 264 ~h~~~ll~qLL~~a~~sl~sK-~~~~w~d~ls~L~~eAv~~V~pd~~~g~~mDi~~yVKIKKI~GGs~~DS~vI~GVV~~ 342 (1679)
.||++++.||++.+.+++.++ ...+|.++++.|+|+|+..++|+.+.++.|||.+|||||||+||++.||++|+||||+
T Consensus 307 ~~fr~~~a~Llr~~~ls~~~d~~~~~W~~ii~~L~~eaa~~~kp~~~~~~~md~~~YVkvK~I~~g~~~dS~vi~Gvv~s 386 (1598)
T KOG0230|consen 307 SHFRALVAQLLRSENLSVVMDGAHQEWLDIITSLCWEAANLLKPDTDSGGLMDPGNYVKVKCVAGGSRVDSEVIKGVVCS 386 (1598)
T ss_pred chHHHHHHHHhcccCcCccccchhhhHHHHHHHHHHHHHHhcCcCcccCCCcCcccceEEEEecCCCcccceeeeEEEee
Confidence 999999999999999985443 4568999999999999999999998899999999999999999999999999999999
Q ss_pred eccCCCCCCccccCCcEEEEeeecccCccc--cCcHHH-HHHHHHHHHHHHHhHhcCCCeEEEecccccHHHHHHHHHcC
Q 000313 343 KHAAHKHMPTEYKNPRLLLIRGVLGLSSSG--LSSFKA-MEQEKDQLKSVMDMIDMCHPNVVLVEKTVSRDIQESILEKG 419 (1679)
Q Consensus 343 Knvahk~M~~~i~NPRILLL~~~LEy~r~e--l~Sle~-i~QE~eyL~~lV~rI~~~~pnVVLveksVs~~Al~~L~~~g 419 (1679)
|+++||.|.+++++|||||+.|+|||+|.. |+|+++ ++||++||+.+|+||.+.+||||||+|+|+++||++|.++|
T Consensus 387 Kn~~~k~M~~~~e~prilll~g~leyqrisn~lsS~etvlqqE~e~lk~~varI~s~~p~vllVeksVS~~aqe~L~~k~ 466 (1598)
T KOG0230|consen 387 KNVAHKRMATKYENPRILLLGGPLEYQRISNQLSSIETVLQQEKEYLKKVVARIESLRPDVLLVEKSVSRIAQELLLDKG 466 (1598)
T ss_pred cchhhhhhhhhccCCceEEEecchhhhhhhccccchHHHHhhHHHHHHHHHHHHHhcCCCeEEEechHHHHHHHHhhccC
Confidence 999999999999999999999999999986 999999 99999999999999999999999999999999999999999
Q ss_pred CeEeecCCHHHHHHHHHHhCCceecccc-CCCCCccccceEEEEEeecccccccCCCCCCCceEEEEEcCCCCceEEEEE
Q 000313 420 MTLVFDMKLHRLERVARCTGSPILSSGS-LTSQKLKHCDSFYIKKFVEEHAGFREGGKRPSKTLMFIEGCPTRLGCTVLL 498 (1679)
Q Consensus 420 Itvv~nVK~~~LeRIAR~TGA~IvsSid-L~~~~LG~C~~f~v~~~~~~~~~~~~~~~~~~Ktl~ffegc~~~~gcTILL 498 (1679)
|+++.|||+..|+||||||||+|++++| ++.++||+|+.|+++++.++| +..||+|||+||++++||||||
T Consensus 467 I~lvlnvK~s~leRIsR~tga~I~~siDslt~~klg~C~~F~v~~~~e~h--------k~sKTlmffegc~~~lG~TiLL 538 (1598)
T KOG0230|consen 467 ISLVLNVKRSLLERISRCTGADIVPSVDSLTSQKLGYCELFRVENYVEEH--------KPSKTLMFFEGCPKPLGCTILL 538 (1598)
T ss_pred eEEEEeccHHHHHHHHHHhcCceecchhhhhccccCCCccHhhhhhhhcc--------cchhhhHHhhcCCCCCCceEEe
Confidence 9999999999999999999999999999 999999999999999999875 5689999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHhhcCeEeecCCcccccCCccccc-cCCCccccccccccCCCCCcccccCcccCCC
Q 000313 499 KGSNSDELKRIKSVVQCAVVMAYHLILETSFLVDQRAMFSTIPFAEVA-GILPMEQQHPALENGNSNVSCFEHSSVESGS 577 (1679)
Q Consensus 499 RG~s~~~L~evKrvl~dal~vv~~l~lE~s~l~dgGa~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (1679)
||++.++|++||+|++++++++||+.||++||+|.||++......... ..+++... ..+.+|.....
T Consensus 539 rG~~~~eLkkVK~Vvq~~v~aay~l~LE~SflaDe~asi~~~~~~~~~~~~~~~~~~------~~s~~~~~t~s------ 606 (1598)
T KOG0230|consen 539 RGDSLEELKKVKHVVQYLVFAAYHLALETSFLADEGASISSPKLSIPTSVETSIINR------SISTSPGETDS------ 606 (1598)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCccccccccccceeccccccc------ccccCCCCCcc------
Confidence 999999999999999999999999999999999999998864332211 11110000 00111110000
Q ss_pred CcccCCCCCCCcCCCCCcCCCCCCCccccccCCCCccccCccccccccccccccCCCCcccccCC-----Cccccccccc
Q 000313 578 STMDIPISNGFHEDGSYANSGPEGESILSYEPYNPAVFSGFSSLSASLRKVIGDNFPLSSAAAYP-----SLTSYFGFRG 652 (1679)
Q Consensus 578 ~~~~~~~~n~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~ls~~l~~~~~~~~P~~~~~~~~-----~l~~~~~~~~ 652 (1679)
.....+......+.... . .....+.++..|. .....|....++++ .+..+.+.-.
T Consensus 607 t~~~a~~~~~~~e~~~~-~-~~~~~~~ls~sp~------------------~~~~~~~~~i~P~~~~~e~~~~~~~~~~~ 666 (1598)
T KOG0230|consen 607 TAEKAPVEALQVEPNRF-N-GALSSELLSSSPF------------------LEFPLDLLEIAPGELVIETRLSSYSKGPK 666 (1598)
T ss_pred hhcccchhhhccchhhh-h-cccccceeecccc------------------cccCCCccccCCccceeecchhhhcCchh
Confidence 00000000000000000 0 0000111111111 00011110000000 0000000000
Q ss_pred ccccCccccCCCccccccccCCCCCCccCCCCcccccc---cCCCCCCCCCCCCCCCCC--CCCCCCCCcccCCccccCC
Q 000313 653 REQSGQITEDVPVSTIMDASLDGPCDTEAKSSSDEEKS---LDGQPTSLPSCPEAPLSM--GKDCGNDEDHSQSQEDANA 727 (1679)
Q Consensus 653 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~q~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~~ 727 (1679)
..+-....+... ..++.. ..+....+.+...... ...+. +..+... .++..-.+-+.+..++.++
T Consensus 667 ~~~lv~~~es~~-~~~~~s---~~~~~~~l~e~~~~~~~~~~~k~~------~~~~~~~~~~~~~~~~~~e~~~s~~~~~ 736 (1598)
T KOG0230|consen 667 QNGLVPAHESVL-NDLHES---TLSILSKLPETRSGTHEGNEDKGP------GLEPELANNQNIQRPEETEEQSSKDALD 736 (1598)
T ss_pred hccccccccccc-cccccc---cccccccccchhcccchhccccCc------cccccccccccccchhhhhhhhcccCCC
Confidence 000000000000 000000 0000000110000000 00000 0000000 0000000111125678999
Q ss_pred CCCCCeEEEEEeeccCCCCCccCCccEEEEeccCCCCccHHHHHHHHhhccCCCCCCCCCChhcccceeeecCcEEEEEE
Q 000313 728 SLDSQSILVLMSSRNALRGTICEQSHFSHIMFYKNFDVPLGKFLQDNLLNQRKQCASCSELPEAHFYYYARHNKQLTIRV 807 (1679)
Q Consensus 728 p~~HQsI~VL~Ss~~~~~~~pC~~P~lv~I~fY~~~D~tLGqFLed~~~~~~~~C~sC~~pm~~H~r~YvH~~g~ltI~V 807 (1679)
|.+||+|+||||++|.+++.+|++|||++|+|||.+|++|||||+++||++.|.|++|.+||++|+|+|||++|+++|.|
T Consensus 737 ~~~HQsilVl~ss~~~~k~~~C~r~~l~~ikyy~~~D~~lg~fL~~~~f~~~~~C~sC~~~~laHv~~yvh~~g~l~I~v 816 (1598)
T KOG0230|consen 737 PSSHQSILVLFSSRSVLKGSVCERPHLLRIKYYGSFDKPLGRFLRDYLFDQRYMCPSCNEPMLAHVRCYVHGNGSLTISV 816 (1598)
T ss_pred ccccceeEEEEeeeeeccCCccccccEEEEEeeccccchHhHHHHHHHhcccccCccccchHHHHHHHHhhccCceEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCccccCCCCCCCcEEEeecCCCCCCCCCCCCCCceEEcccccccccHHHHHhhhcCCCCCCCCCCCCCCCcccccee
Q 000313 808 KRLPDRIRLSGEAEGKLWMWSRCGRCKTANGVPKSTKRVVISTAACGLSFGKFLELSFSHHSSSTRLSSCGHSLHRDFLY 887 (1679)
Q Consensus 808 e~l~~~~~lpge~~~~I~MWs~Ck~C~~~~g~~~sTp~v~MSd~tW~~SFGKfLEL~F~~~~~~~r~~~C~H~l~rDhlr 887 (1679)
++++.. +||+.+|+|||||||++|++. ||+|++|+||++||++||||||||+||+|+++.|+..|||+|||||||
T Consensus 817 ~~~~e~--l~~e~~~kI~~w~~ClkC~~~---~~sT~rv~~Sdaaw~lSfgKfLEl~fs~~a~~~R~~~C~Hsl~rD~L~ 891 (1598)
T KOG0230|consen 817 KKLPEL--LPGEQKGKIWMWSRCLKCNRF---PPSTRRVVMSDAAWGLSFGKFLELSFSNHATANRVASCGHSLHRDCLR 891 (1598)
T ss_pred eccccc--cccccCceEEEEeccccCCCC---CCCcceeEcchhhHhhhHHHHHHhhhccccccccccCCcchhhhhhhh
Confidence 999987 899999999999999999985 899999999999999999999999999999999999999999999999
Q ss_pred ecccCCeEEEEEeeeeeeeEEecCCCeeEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhh
Q 000313 888 FFGLGPMVGMFKYSPFTTYNMCVPPQKLEFSNSINKWLKEEFQNVYTKGILLFSEVESSLKQIGSRFVGSTLNLQGSLKE 967 (1679)
Q Consensus 888 yFg~~~~Va~f~YspI~v~ev~lPp~~l~~~~~~~~~l~~e~~~v~~k~~~~f~sV~~rL~~ik~~~~~~~~~~~~~~~~ 967 (1679)
|||||+|||+|+|++|++|+|++||.+|+|++..++|+++|+++|+.||+.+|++|.++|.+|+.+-+ . +..
T Consensus 892 ffgf~~mva~f~ys~i~v~~v~lpp~~l~~~~~~~~~~~~e~k~v~~k~~~~~n~v~~~l~~i~~~~~----~----~~~ 963 (1598)
T KOG0230|consen 892 FFGFGNMVACFRYSPIEVYEVDLPPSKLEFNHIQQEWLQEEIKEVIEKGEELYNEVLERLSRIAEKDE----N----RPL 963 (1598)
T ss_pred hcccCCceeeeeeccceeEEEeCChhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc----c----cch
Confidence 99999999999999999999999999999994445999999999999999999999999999998721 1 357
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhhHhHHHHHHHHHHHHhhhhhHHhhhccCCCCcc-cccCCCCCCCCC
Q 000313 968 FSVTSEILKQERSVFEVDIQKTVAKKVHSDEALHKLLSLNRLRWELLIESCIWDRRLHSLLLPDPTV-VITGATEKPGPE 1046 (1679)
Q Consensus 968 i~eL~~~l~~e~~e~~~~l~~~~~~~~~~~~~~~~iL~lN~l~r~L~~~~~~Wd~rl~~l~~~~~~~-~~~~~~~~~~~~ 1046 (1679)
+.+|+.+|.+|+.+|++.|+.++.+.....+..+++|.||+++|.|...++.||.||+.+....+.. ..+.+.++. +
T Consensus 964 i~~l~~~l~~e~~~f~~~l~~~~~~~~~~~~~s~d~l~l~~~rr~l~~~s~~w~~~l~s~~~~~k~~~~~~~~~~~~--~ 1041 (1598)
T KOG0230|consen 964 IQELKELLKHEKKEFKQNLQPIFTLEVDDGQLSHDILALNRDRRALLASSYLWDERLISLSKSLKLESSKDTKPKES--E 1041 (1598)
T ss_pred hhhhhhhhhhhHHHHHHhhhhhhhhccccCcchhhHHHHHHHHHHHHhhhccccccchhhhhhhccccccccccccc--c
Confidence 8999999999999999999999998877788899999999999999999999999998765432200 000000110 1
Q ss_pred cccccccCCCCCCCCCCCCCcCCCCCCCCCCCCCCCccCcccccchhhhhhcccCCCCCCCCcCccccccc-----cccc
Q 000313 1047 QTKVKMDGTTAKGNEVPEPEVDSGNGDNVSNNFGNLEVLPDVAAEADELVVKEIPIDGPDRESGERDHKKT-----TVLK 1121 (1679)
Q Consensus 1047 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 1121 (1679)
+. .+ ......+++......++.....+......+...++..+.. ...+...... .+..
T Consensus 1042 ~~-----~~-~~~~r~p~~~k~~~~~~~~~~~~s~~~~~~~~~lp~~~~s-----------~~~d~~~~~~~~~~~~~~s 1104 (1598)
T KOG0230|consen 1042 TN-----ST-AKRKRSPEPQKGVDEDSFLTDSSSDVSSLEHLNLPLPEDS-----------NSTDTGLSGPSEVLEDNES 1104 (1598)
T ss_pred cc-----Cc-cccccCchhhccccccccccccccccCccccccCCCCCcc-----------cccchhccCcccccccccc
Confidence 00 00 0000011110000000000000000000000000000000 0000000000 0000
Q ss_pred ccccc--cccC-----CCCCCccccccccccCCCCCCCCCCCcccccccccccccccccccCCcccCCCCCccCCCCCCC
Q 000313 1122 DVETS--IASD-----LSSTSLANEDSMVRSNVSDYLSGDDNVQAGKFLMSENLQVDKVVPNSQYLANSGSVVDPNASKN 1194 (1679)
Q Consensus 1122 ~~e~~--~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~~~~~~~~~ 1194 (1679)
..+.. ..+. ...+++.+..+..|.. .+. + ....|.... +...++. +.
T Consensus 1105 ~~~~~~~v~n~~s~~~~~~~~~~~~l~~~~~g----~r~--~--------------~~~~P~s~~----~~~~~~~--~~ 1158 (1598)
T KOG0230|consen 1105 IDEMLGSVRNTYSLANKVRKILKQILDSATIG----NRA--N--------------PKSSPFSGQ----DHSTDLP--LE 1158 (1598)
T ss_pred hhhcccccccccchhhHHHHHHHHhccccccc----ccc--c--------------CCCCCCchh----hhccccc--cc
Confidence 00000 0000 0000011111111100 000 0 000111000 0000000 00
Q ss_pred CCccCcccchh-hhccccccCchHHHHH-HHHHhhccCCCCCccccccCCCCCCCchhhhhhccCCcccccCCCCCccee
Q 000313 1195 ETSTHSLLSDL-EKLNGWFWMPFSELQQ-IYMKDLQRGFVPKFECVSRYTPEHLPTVYQLISEEGTRMHIPLGAENYMVS 1272 (1679)
Q Consensus 1195 ~~~~~~~~~~~-~~~~~~~~~p~~~~~~-~~~~~~~~~~l~k~~~v~~~~p~~~~~~~~~~~~~g~~~~~p~~~~~~~v~ 1272 (1679)
.... ... .+...|++.||..+.. .+.++.+... ++.......-|.++++-.....+.++|+.+|++.++.+|+
T Consensus 1159 ~~~~----~~~e~~~~~~~e~~~~~~~~~~~~~e~~lns-~~~~~~~~~~~k~~~s~~~s~~~~~~rLl~p~~~ndl~vp 1233 (1598)
T KOG0230|consen 1159 SNPI----HVLEKELSSWIEDPLTNMYYREATKELSLNS-QKNSAETKEPPKYPSSESESEPESSSRLLLPLGLNDLVVP 1233 (1598)
T ss_pred cCCc----cccccccHHHHhhhhhhHhHHHHHHHHHhhc-chhhcccccCCcCcccccccccccccceeccccCCcccCC
Confidence 0000 111 1455799999988865 5555443322 1111122223334333222334678899999999999999
Q ss_pred eccCCcchhHHhhhhcccCCccccccccCCCCCCCCcccccccccccccC-Ccccc-ccccCCCCCCCCcccccccccCc
Q 000313 1273 DYEGELSSIIACALAVLKEMPLSTVVFNEDSGRDGDMAVKTIDSLRSLTR-IPTMA-SSLWSVNGSSDSDSIYASLSISS 1350 (1679)
Q Consensus 1273 V~edEpSSiIA~aL~s~ey~~~l~~~~~~~~~~~~~~~~k~~~s~~~~~~-~~~~~-ss~~s~~~~~~s~~~~~~~s~~~ 1350 (1679)
||||||+|+|||||++.+|..+... . +.. ..-+.+.+.. ..... ...|... +.+... +.
T Consensus 1234 ~~edpp~s~ia~al~s~~~~~q~~~----p-----~~s--is~~~S~~~~~~s~~~e~~~~~~~-sl~~s~------l~- 1294 (1598)
T KOG0230|consen 1234 VYEDPPPSLIAYALSSKERINQESS----P-----GLS--ISFSLSNLQGRLSKISEFDDTKSE-SLDNSG------LE- 1294 (1598)
T ss_pred cccCCCchhhhhhhcchhhccCCCC----C-----Ccc--ccccccccccchhhhhhhhhhhhc-cccccc------cc-
Confidence 9999999999999999888765431 0 000 0000000000 00000 0000000 000000 00
Q ss_pred ccccccccccccccccCCCCCCCCCceeeeecccCCCCceEEEEeCHHHHHHHHHhcCCChHHHHHHhcccCcCCCCCCC
Q 000313 1351 EDSRFSSFDGLNLLESLIPPEVLSPEVSIGISKSLGKGKYSVKCLYANQFRDLRSRCCPSELAYIDSLSRCRNWDAKGGK 1430 (1679)
Q Consensus 1351 ~~~~~~~~d~~~~l~s~~~~e~~~~~v~~~~~~~~~~~~~~~~~y~p~~F~~LR~~~gi~e~~yi~SLs~~~~~~~sgGK 1430 (1679)
.+.+ ..++.++++. ++..+++.++|++|+.+|+|++|||++|++||+.||+++++||+||+||.+|.++|||
T Consensus 1295 ----~s~~---~~~e~l~~~~-~~~~~h~~~~f~egk~k~svk~~yAe~F~~LR~~c~~sEe~fIrSLsRc~~W~aqGGK 1366 (1598)
T KOG0230|consen 1295 ----SSSY---RRGENLQKSK-LETRTHLEYQFSEGKAKYSVKCYYAEQFRALRKICCPSEEDFIRSLSRCVKWEAQGGK 1366 (1598)
T ss_pred ----hhhh---cchhhccccc-cccccceeeeccCCceEEEEEEEehhhHHHHHHhhCchHHHHHHHHhcCcccccCCCc
Confidence 0011 1223333332 4567889999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEecCCcEEEEecCHHHHHHHHHHHHHHHHHHhhhcCCCCCcchheeeeeEEEeeccCCCCcceeEEEEEEeecc
Q 000313 1431 SKSFFVKTLDDRFIIKEIKKTEFDSFDKFALHYFKYMNESFDSGNQTCLAKVLGIYQVTIRQPKSGKEMRHDLMVMENLT 1510 (1679)
Q Consensus 1431 SGs~F~~T~D~rFIiKtis~~E~~~fl~~lp~Yf~y~~~~~~~~~~TlL~Ki~Gly~i~~k~~~~g~~~k~~~iVMeNlf 1510 (1679)
|||+|+||.|+|||||+|++.|+++|++|||+||+||.+++++..||+||||||+|||.+|++++|++.||++|||||||
T Consensus 1367 Sgs~F~KTlDDRFIiKq~sk~EleSFikFAP~YFkYl~~s~~~~~PT~LAKIlGiyqV~vK~~~sgke~K~DvmVMENLf 1446 (1598)
T KOG0230|consen 1367 SGSFFAKTLDDRFIIKQMSKTELESFIKFAPAYFKYLTESISQKSPTCLAKILGIYQVSVKSPKSGKETKMDVMVMENLF 1446 (1598)
T ss_pred ccceeeccccchhhhhhccHHHHHHHHhhhHHHHHHHHHHHhcCCcchhhhhheeEEEEEecCCCCceeEeeeeeehhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccceeeeccCccccccccCCCCCCccccchhhhhhcCCCCceeChHHHHHHHHHHHhhHhhhccCCcccccceEEee
Q 000313 1511 FERNITRQYDLKGALHARYNTTVDGSGDVLLDQNFVNDMNSSPLYVSNTAKRILQRAVWNDTTFLNSIDVMDYSLLVGVD 1590 (1679)
Q Consensus 1511 ~~~~i~~~yDLKGS~~~R~~~~~~~~~~Vl~D~n~~~~~~~~pi~l~~~~k~~L~~~l~~Dt~FL~~~nvMDYSLLvGv~ 1590 (1679)
|+++++|+||||||+|||+++.+++.+.||+|+||+++|+++||||++++|+.|.++|||||.||+++||||||||||||
T Consensus 1447 Y~r~vsRifDLKGS~RnR~v~~t~~~d~VLLDeNlVe~~~~sPIfV~~~sK~lL~~aiwNDT~FLas~~VMDYSLLVGvD 1526 (1598)
T KOG0230|consen 1447 YGRKVSRIFDLKGSLRNRYVPTTSGADEVLLDENLVEMMWTSPIYVGSHSKRLLRRAIWNDTSFLASINVMDYSLLVGVD 1526 (1598)
T ss_pred hccccceeeeccchhhhccCCCCCCCceEEecHHHHhhhhcCCeeehHhHHHHHHHHHhcchHHhhhcccceeeeEEEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCceEEEeEEEeeeccCchhhHHHHHhhhc--CCCCCCCcccChhHHHHHHHHHHhhhcccCCCCCCCCC
Q 000313 1591 SQRRELVCGIIDYLRQYTWDKHLETWVKSSL--VPKNVLPTVISPKDYKRRFRKFMSTHFLSVPDHWCSPE 1659 (1679)
Q Consensus 1591 ~~~~~l~vGIID~Lr~yt~~KklE~~~K~~~--~~~~~~~Tvv~P~~Y~~RF~~~m~~yf~~vpd~W~~~~ 1659 (1679)
+++++||+||||||||||||||||+|||..| .|+|..||||+|++|++||++||++|||+|||+|++++
T Consensus 1527 ~e~~ELvlGIIDfiRtYTWDKkLESWVK~sGl~gpk~~~PTVVSP~qYK~RFRkAMd~YfL~VPD~Wtg~g 1597 (1598)
T KOG0230|consen 1527 DENNELVLGIIDFIRTYTWDKKLESWVKSSGLGGPKNKQPTVVSPEQYKTRFRKAMDTYFLMVPDQWTGLG 1597 (1598)
T ss_pred CCCCeEEEEehHhhhhhhhhhhhhhheeccccccCCCCCCceeCHHHHHHHHHHHHhheeeecCCcccCCC
Confidence 9999999999999999999999999999998 48899999999999999999999999999999999886
|
|
| >cd00139 PIPKc Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate | Back alignment and domain information |
|---|
| >COG5253 MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >smart00330 PIPKc Phosphatidylinositol phosphate kinases | Back alignment and domain information |
|---|
| >KOG0229 consensus Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF01504 PIP5K: Phosphatidylinositol-4-phosphate 5-Kinase; InterPro: IPR002498 This entry represents a conserved region from the common kinase core found in the type I phosphatidylinositol-4-phosphate 5-kinase (PIP5K) family as described in [] | Back alignment and domain information |
|---|
| >PLN03185 phosphatidylinositol phosphate kinase; Provisional | Back alignment and domain information |
|---|
| >cd03334 Fab1_TCP TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1 | Back alignment and domain information |
|---|
| >TIGR02344 chap_CCT_gamma T-complex protein 1, gamma subunit | Back alignment and domain information |
|---|
| >KOG0364 consensus Chaperonin complex component, TCP-1 gamma subunit (CCT3) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR02339 thermosome_arch thermosome, various subunits, archaeal | Back alignment and domain information |
|---|
| >cd03343 cpn60 cpn60 chaperonin family | Back alignment and domain information |
|---|
| >cd03339 TCP1_epsilon TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit | Back alignment and domain information |
|---|
| >cd03335 TCP1_alpha TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit | Back alignment and domain information |
|---|
| >cd03340 TCP1_eta TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit | Back alignment and domain information |
|---|
| >PTZ00212 T-complex protein 1 subunit beta; Provisional | Back alignment and domain information |
|---|
| >TIGR02343 chap_CCT_epsi T-complex protein 1, epsilon subunit | Back alignment and domain information |
|---|
| >cd03333 chaperonin_like chaperonin_like superfamily | Back alignment and domain information |
|---|
| >cd03336 TCP1_beta TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit | Back alignment and domain information |
|---|
| >cd03338 TCP1_delta TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit | Back alignment and domain information |
|---|
| >TIGR02342 chap_CCT_delta T-complex protein 1, delta subunit | Back alignment and domain information |
|---|
| >cd03337 TCP1_gamma TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit | Back alignment and domain information |
|---|
| >TIGR02340 chap_CCT_alpha T-complex protein 1, alpha subunit | Back alignment and domain information |
|---|
| >TIGR02347 chap_CCT_zeta T-complex protein 1, zeta subunit | Back alignment and domain information |
|---|
| >TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit | Back alignment and domain information |
|---|
| >KOG0361 consensus Chaperonin complex component, TCP-1 eta subunit (CCT7) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR02341 chap_CCT_beta T-complex protein 1, beta subunit | Back alignment and domain information |
|---|
| >cd03342 TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit | Back alignment and domain information |
|---|
| >cd00309 chaperonin_type_I_II chaperonin families, type I and type II | Back alignment and domain information |
|---|
| >TIGR02346 chap_CCT_theta T-complex protein 1, theta subunit | Back alignment and domain information |
|---|
| >PF00118 Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperonins cpn60 signature Chaperonins TCP-1 signatures 60 kd chaperonin signature; InterPro: IPR002423 Partially folded polypeptide chains, either newly made by ribosomes or emerging from mature proteins unfolded by stress, run the risk of aggregating with one another to the detriment of the organism | Back alignment and domain information |
|---|
| >KOG0358 consensus Chaperonin complex component, TCP-1 delta subunit (CCT4) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd03341 TCP1_theta TCP-1 (CTT or eukaryotic type II) chaperonin family, theta subunit | Back alignment and domain information |
|---|
| >KOG0363 consensus Chaperonin complex component, TCP-1 beta subunit (CCT2) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0360 consensus Chaperonin complex component, TCP-1 alpha subunit (CCT1) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0359 consensus Chaperonin complex component, TCP-1 zeta subunit (CCT6) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0362 consensus Chaperonin complex component, TCP-1 theta subunit (CCT8) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK12849 groEL chaperonin GroEL; Reviewed | Back alignment and domain information |
|---|
| >cd03344 GroEL GroEL_like type I chaperonin | Back alignment and domain information |
|---|
| >PRK00013 groEL chaperonin GroEL; Reviewed | Back alignment and domain information |
|---|
| >PTZ00114 Heat shock protein 60; Provisional | Back alignment and domain information |
|---|
| >PRK12851 groEL chaperonin GroEL; Reviewed | Back alignment and domain information |
|---|
| >TIGR02348 GroEL chaperonin GroL | Back alignment and domain information |
|---|
| >PRK12850 groEL chaperonin GroEL; Reviewed | Back alignment and domain information |
|---|
| >PRK12852 groEL chaperonin GroEL; Reviewed | Back alignment and domain information |
|---|
| >CHL00093 groEL chaperonin GroEL | Back alignment and domain information |
|---|
| >PRK14104 chaperonin GroEL; Provisional | Back alignment and domain information |
|---|
| >PLN03167 Chaperonin-60 beta subunit; Provisional | Back alignment and domain information |
|---|
| >KOG0357 consensus Chaperonin complex component, TCP-1 epsilon subunit (CCT5) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0356 consensus Mitochondrial chaperonin, Cpn60/Hsp60p [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1679 | ||||
| 1q3s_A | 548 | Crystal Structure Of The Chaperonin From Thermococc | 2e-12 | ||
| 1q2v_A | 548 | Crystal Structure Of The Chaperonin From Thermococc | 2e-12 | ||
| 1q3r_A | 548 | Crystal Structure Of The Chaperonin From Thermococc | 2e-12 | ||
| 1bo1_A | 416 | Phosphatidylinositol Phosphate Kinase Type Ii Beta | 3e-12 | ||
| 2gk9_A | 392 | Human Phosphatidylinositol-4-Phosphate 5-Kinase, Ty | 3e-12 | ||
| 2ybx_A | 394 | Crystal Structure Of Human Phosphatidylinositol-5-P | 2e-11 | ||
| 3iyg_G | 515 | Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGST | 4e-09 | ||
| 3aq1_B | 500 | Open State Monomer Of A Group Ii Chaperonin From Me | 4e-09 | ||
| 3ko1_A | 553 | Cystal Structure Of Thermosome From Acidianus Tengc | 1e-08 | ||
| 3p9d_C | 590 | The Crystal Structure Of Yeast Cct Reveals Intrinsi | 3e-08 | ||
| 1a6d_A | 545 | Thermosome From T. Acidophilum Length = 545 | 5e-08 | ||
| 3izi_A | 513 | Mm-Cpn Rls With Atp Length = 513 | 4e-07 | ||
| 3rus_A | 543 | Crystal Structure Of Cpn-Rls In Complex With Adp Fr | 5e-07 | ||
| 3izh_A | 513 | Mm-Cpn D386a With Atp Length = 513 | 1e-06 | ||
| 3los_A | 543 | Atomic Model Of Mm-Cpn In The Closed State Length = | 1e-06 | ||
| 1a6d_B | 543 | Thermosome From T. Acidophilum Length = 543 | 2e-06 | ||
| 3izk_A | 491 | Mm-Cpn Rls Deltalid With Atp Length = 491 | 4e-06 | ||
| 3j02_A | 491 | Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Boun | 5e-06 | ||
| 3izn_A | 491 | Mm-Cpn Deltalid With Atp Length = 491 | 1e-05 | ||
| 3iyf_A | 521 | Atomic Model Of The Lidless Mm-Cpn In The Open Stat | 1e-05 | ||
| 1gml_A | 178 | Crystal Structure Of The Mouse Cct Gamma Apical Dom | 5e-04 |
| >pdb|1Q3S|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus Strain Ks-1 (Formiii Crystal Complexed With Adp) Length = 548 | Back alignment and structure |
|
| >pdb|1Q2V|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus Strain Ks-1 (Nucleotide-Free Form) Length = 548 | Back alignment and structure |
| >pdb|1Q3R|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus Strain Ks-1 (Nucleotide-Free Form Of Single Mutant) Length = 548 | Back alignment and structure |
| >pdb|1BO1|A Chain A, Phosphatidylinositol Phosphate Kinase Type Ii Beta Length = 416 | Back alignment and structure |
| >pdb|2GK9|A Chain A, Human Phosphatidylinositol-4-Phosphate 5-Kinase, Type Ii, Gamma Length = 392 | Back alignment and structure |
| >pdb|2YBX|A Chain A, Crystal Structure Of Human Phosphatidylinositol-5-Phosphate 4-Kinase Type-2 Alpha Length = 394 | Back alignment and structure |
| >pdb|3IYG|G Chain G, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM Cryo-Em Map Length = 515 | Back alignment and structure |
| >pdb|3AQ1|B Chain B, Open State Monomer Of A Group Ii Chaperonin From Methanococcoides Burtonii Length = 500 | Back alignment and structure |
| >pdb|3KO1|A Chain A, Cystal Structure Of Thermosome From Acidianus Tengchongensis Strain S5 Length = 553 | Back alignment and structure |
| >pdb|3P9D|C Chain C, The Crystal Structure Of Yeast Cct Reveals Intrinsic Asymmetry Of Eukaryotic Cytosolic Chaperonins Length = 590 | Back alignment and structure |
| >pdb|1A6D|A Chain A, Thermosome From T. Acidophilum Length = 545 | Back alignment and structure |
| >pdb|3IZI|A Chain A, Mm-Cpn Rls With Atp Length = 513 | Back alignment and structure |
| >pdb|3RUS|A Chain A, Crystal Structure Of Cpn-Rls In Complex With Adp From Methanococcus Maripaludis Length = 543 | Back alignment and structure |
| >pdb|3IZH|A Chain A, Mm-Cpn D386a With Atp Length = 513 | Back alignment and structure |
| >pdb|3LOS|A Chain A, Atomic Model Of Mm-Cpn In The Closed State Length = 543 | Back alignment and structure |
| >pdb|1A6D|B Chain B, Thermosome From T. Acidophilum Length = 543 | Back alignment and structure |
| >pdb|3IZK|A Chain A, Mm-Cpn Rls Deltalid With Atp Length = 491 | Back alignment and structure |
| >pdb|3J02|A Chain A, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State Length = 491 | Back alignment and structure |
| >pdb|3IZN|A Chain A, Mm-Cpn Deltalid With Atp Length = 491 | Back alignment and structure |
| >pdb|3IYF|A Chain A, Atomic Model Of The Lidless Mm-Cpn In The Open State Length = 521 | Back alignment and structure |
| >pdb|1GML|A Chain A, Crystal Structure Of The Mouse Cct Gamma Apical Domain (Triclinic) Length = 178 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A Length = 394 | Back alignment and structure |
|---|
Score = 162 bits (410), Expect = 3e-43
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 15/217 (6%)
Query: 1382 SKSLGKGKYSVKCLYANQFRDLRSRCCPSELAYIDSLSRCRNW-DAKGGKSKSFFVKTLD 1440
+K + K FR+LR R + + +SL+R + +S + F + D
Sbjct: 69 NKENMPSHFKFKEYCPMVFRNLRERFGIDDQDFQNSLTRSAPLPNDSQARSGARFHTSYD 128
Query: 1441 DRFIIKEIKKTEFDSFDKFALHYFKYMNESFDSGNQTCLAKVLGIYQVTIRQPKSGKEMR 1500
R+IIK I + Y +Y+ E T L + LG+Y++ + +
Sbjct: 129 KRYIIKTITSEDVAEMHNILKKYHQYIVECH---GITLLPQFLGMYRLNVD------GVE 179
Query: 1501 HDLMVMENLTFER-NITRQYDLKGALHARYNTTVDGSGD--VLLDQNFVNDMNSSPLYVS 1557
++V N+ R ++ R+YDLKG+ AR + + + + L D +F+N+ +Y+
Sbjct: 180 IYVIVTRNVFSHRLSVYRKYDLKGSTVAREASDKEKAKELPTLKDNDFINEGQ--KIYID 237
Query: 1558 NTAKRILQRAVWNDTTFLNSIDVMDYSLLVGVDSQRR 1594
+ K++ + D FL + +MDYSLLVG+ R
Sbjct: 238 DNNKKVFLEKLKKDVEFLAQLKLMDYSLLVGIHDVER 274
|
| >2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A Length = 394 | Back alignment and structure |
|---|
| >2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens} Length = 392 | Back alignment and structure |
|---|
| >2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens} Length = 392 | Back alignment and structure |
|---|
| >3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii} Length = 500 | Back alignment and structure |
|---|
| >1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A* Length = 545 | Back alignment and structure |
|---|
| >3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis} Length = 553 | Back alignment and structure |
|---|
| >3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 515 | Back alignment and structure |
|---|
| >3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A Length = 543 | Back alignment and structure |
|---|
| >1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A Length = 548 | Back alignment and structure |
|---|
| >1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B Length = 543 | Back alignment and structure |
|---|
| >3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* Length = 550 | Back alignment and structure |
|---|
| >3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 515 | Back alignment and structure |
|---|
| >1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A Length = 178 | Back alignment and structure |
|---|
| >3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 529 | Back alignment and structure |
|---|
| >3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 515 | Back alignment and structure |
|---|
| >3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* Length = 546 | Back alignment and structure |
|---|
| >3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* Length = 527 | Back alignment and structure |
|---|
| >3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 512 | Back alignment and structure |
|---|
| >3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A Length = 513 | Back alignment and structure |
|---|
| >3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* Length = 562 | Back alignment and structure |
|---|
| >3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* Length = 568 | Back alignment and structure |
|---|
| >3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* Length = 559 | Back alignment and structure |
|---|
| >3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 517 | Back alignment and structure |
|---|
| >3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* Length = 528 | Back alignment and structure |
|---|
| >3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 518 | Back alignment and structure |
|---|
| >3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 2bbm_B 2bbn_B Length = 590 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A Length = 159 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1679 | ||||
| d1bo1a_ | 383 | d.143.1.2 (A:) Phosphatidylinositol phosphate kina | 6e-47 | |
| d1gmla_ | 168 | c.8.5.2 (A:) Thermosome, A-domain {Mouse (Mus musc | 1e-27 | |
| d1q3qa2 | 153 | c.8.5.2 (A:217-369) Thermosome, A-domain {Archaeon | 4e-24 | |
| d1a6db2 | 152 | c.8.5.2 (B:216-367) Thermosome, A-domain {Archaeon | 9e-24 | |
| d1assa_ | 152 | c.8.5.2 (A:) Thermosome, A-domain {Archaeon Thermo | 2e-22 | |
| d1q3qa3 | 107 | d.56.1.2 (A:146-216,A:370-405) Thermosome, I domai | 2e-08 | |
| d1a6db3 | 107 | d.56.1.2 (B:145-215,B:368-403) Thermosome, I domai | 7e-05 | |
| d1a6da3 | 105 | d.56.1.2 (A:146-214,A:368-403) Thermosome, I domai | 2e-04 |
| >d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]} Length = 383 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: SAICAR synthase-like superfamily: SAICAR synthase-like family: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta domain: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta species: Human (Homo sapiens) [TaxId: 9606]
Score = 171 bits (435), Expect = 6e-47
Identities = 70/297 (23%), Positives = 120/297 (40%), Gaps = 21/297 (7%)
Query: 1383 KSLGKGKYSVKCLYANQFRDLRSRCCPSELAYIDSLSRCRNWDAKG-GKSKSFFVKTLDD 1441
K ++ K FR+LR R + Y +S++R ++ G+ + F+ T D
Sbjct: 53 KENLPSRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPINSDSQGRCGTRFLTTYDR 112
Query: 1442 RFIIKEIKKTEFDSFDKFALHYFKYMNESFDSGNQTCLAKVLGIYQVTIRQPKSGKEMRH 1501
RF+IK + + Y +++ E T L + LG+Y++T+ +
Sbjct: 113 RFVIKTVSSEDVAEMHNILKKYHQFIVECH---GNTLLPQFLGMYRLTV------DGVET 163
Query: 1502 DLMVMENLTFER-NITRQYDLKGALHARYNTTVDGSGD--VLLDQNFVNDMNSSPLYVSN 1558
++V N+ R + R+YDLKG+ AR + + + D D +F+N+ L+V
Sbjct: 164 YMVVTRNVFSHRLTVHRKYDLKGSTVAREASDKEKAKDLPTFKDNDFLNE--GQKLHVGE 221
Query: 1559 TAKRILQRAVWNDTTFLNSIDVMDYSLLVGVDSQRRELVCGIIDYLRQYTWDKHLETWVK 1618
+K+ + D FL + +MDYSLLVG+ R + R + +
Sbjct: 222 ESKKNFLEKLKRDVEFLAQLKIMDYSLLVGIHDVDRAEQEEMEVEERAEDEECENDGVGG 281
Query: 1619 SSLVPKNVLPTVISPKDYKRRFRKFMSTHFLSVPDHWCSP--ESDDPCEL--CGIKD 1671
+ L P SP + R F F D + ES E+ I D
Sbjct: 282 NLLCSYGTPPD--SPGNLLSFPRFFGPGEFDPSVDVYAMKSHESSPKKEVYFMAIID 336
|
| >d1gmla_ c.8.5.2 (A:) Thermosome, A-domain {Mouse (Mus musculus), gamma chain [TaxId: 10090]} Length = 168 | Back information, alignment and structure |
|---|
| >d1q3qa2 c.8.5.2 (A:217-369) Thermosome, A-domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]} Length = 153 | Back information, alignment and structure |
|---|
| >d1a6db2 c.8.5.2 (B:216-367) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]} Length = 152 | Back information, alignment and structure |
|---|
| >d1assa_ c.8.5.2 (A:) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]} Length = 152 | Back information, alignment and structure |
|---|
| >d1q3qa3 d.56.1.2 (A:146-216,A:370-405) Thermosome, I domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]} Length = 107 | Back information, alignment and structure |
|---|
| >d1a6db3 d.56.1.2 (B:145-215,B:368-403) Thermosome, I domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]} Length = 107 | Back information, alignment and structure |
|---|
| >d1a6da3 d.56.1.2 (A:146-214,A:368-403) Thermosome, I domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]} Length = 105 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1679 | |||
| d1bo1a_ | 383 | Phosphatidylinositol phosphate kinase IIbeta, PIPK | 100.0 | |
| d1gmla_ | 168 | Thermosome, A-domain {Mouse (Mus musculus), gamma | 100.0 | |
| d1q3qa2 | 153 | Thermosome, A-domain {Archaeon Thermococcus sp. ks | 99.98 | |
| d1assa_ | 152 | Thermosome, A-domain {Archaeon Thermoplasma acidop | 99.97 | |
| d1a6db2 | 152 | Thermosome, A-domain {Archaeon Thermoplasma acidop | 99.97 | |
| d1q3qa3 | 107 | Thermosome, I domain {Archaeon Thermococcus sp. ks | 99.38 | |
| d1a6da3 | 105 | Thermosome, I domain {Archaeon Thermoplasma acidop | 99.31 | |
| d1a6db3 | 107 | Thermosome, I domain {Archaeon Thermoplasma acidop | 99.28 | |
| d1kida_ | 193 | GroEL, A domain {Escherichia coli [TaxId: 562]} | 96.72 | |
| d1srva_ | 145 | GroEL, A domain {Thermus thermophilus [TaxId: 274] | 96.38 | |
| d1ioka2 | 176 | GroEL, A domain {Paracoccus denitrificans [TaxId: | 95.87 | |
| d1sjpa2 | 184 | GroEL, A domain {Mycobacterium tuberculosis, GroEL | 95.17 | |
| d1w2fa_ | 276 | Inositol 1,4,5-trisphosphate 3-kinase A, IP3K A {H | 90.78 |
| >d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: SAICAR synthase-like superfamily: SAICAR synthase-like family: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta domain: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=533.09 Aligned_cols=253 Identities=27% Similarity=0.476 Sum_probs=228.7
Q ss_pred CCCCEEEEEECHHHHHHHHHHCCCCHHHHHHHHCCCCCCCC-CCCCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 88755999909999999998609995889997324676889-99875401897327838987059999999999999999
Q 000313 1386 GKGKYSVKCLYANQFRDLRSRCCPSELAYIDSLSRCRNWDA-KGGKSKSFFVKTLDDRFIIKEIKKTEFDSFDKFALHYF 1464 (1679)
Q Consensus 1386 ~~~~~~~~~y~~~~F~~LR~~~~~~e~~yi~SLs~~~~w~~-sgGKSgs~F~~T~D~rFIiKtis~~E~~~fl~~lp~Yf 1464 (1679)
.+++|+|++|||.+|++||++||+++.+|+.||+++..|.. ++|||||+||+|.|+|||||||++.|+++|+++||.||
T Consensus 56 ~~~~fkfk~Y~P~vF~~lR~~fgi~~~dy~~Sl~~~~~~~~~s~GkSGs~F~~t~D~rfiiKti~~~E~~~l~~~l~~Y~ 135 (383)
T d1bo1a_ 56 LPSRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPINSDSQGRCGTRFLTTYDRRFVIKTVSSEDVAEMHNILKKYH 135 (383)
T ss_dssp SCSEEEEEEECHHHHHHHHHHTTCCHHHHHHHHHSSCCEECCCC----CCEEECTTSSEEEECCCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECHHHHHHHHHHHHHHH
T ss_conf 98870799837999999999819898999997278865434565776786788069968999857999999999989999
Q ss_pred HHHHHHCCCCCCCCHHEEEEEEEEEECCCCCCCCEEEEEEEEEECCCCC-CCCEEEECCCCCCCCCCCCCC--CCCCCCC
Q ss_conf 9996412799983023111067985205899951148999982036887-522356226753345556789--9995212
Q 000313 1465 KYMNESFDSGNQTCLAKVLGIYQVTIRQPKSGKEMRHDLMVMENLTFER-NITRQYDLKGALHARYNTTVD--GSGDVLL 1541 (1679)
Q Consensus 1465 ~yl~~~~~~~~~TlL~Ki~Gly~i~~k~~~~g~~~k~~~iVMeNlf~~~-~i~~~yDLKGS~~~R~~~~~~--~~~~VL~ 1541 (1679)
.|+.++ +++|||+||||+|+|+++ | .+.+||||+|+|+++ .|+++||||||+++|.+...+ ....|||
T Consensus 136 ~h~~~~---n~~TLL~k~~Gly~i~~~----~--~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~lK 206 (383)
T d1bo1a_ 136 QFIVEC---HGNTLLPQFLGMYRLTVD----G--VETYMVVTRNVFSHRLTVHRKYDLKGSTVAREASDKEKAKDLPTFK 206 (383)
T ss_dssp HHHHTT---TTCCSSCCEEEEEEEEET----T--EEEEEEEEECSSCSSSCCSEEEEECCCSSSSCSCSGGGSSSCCEEC
T ss_pred HHHHHC---CCCCCHHHHHEEEEEEEC----C--CEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 999860---787578763430378747----9--5279999842456776510367615863256767533455520465
Q ss_pred CHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC------------------------------
Q ss_conf 31244103898710096899999999996486330289633310577533------------------------------
Q 000313 1542 DQNFVNDMNSSPLYVSNTAKRILQRAVWNDTTFLNSIDVMDYSLLVGVDS------------------------------ 1591 (1679)
Q Consensus 1542 D~nf~~~~~~~pi~l~~~~k~~L~~~l~~Dt~FL~~~nvMDYSLLvGvd~------------------------------ 1591 (1679)
|.||++. ..+|+|+++.|..|++||++||.||+++|||||||||||+.
T Consensus 207 D~df~~~--~~~i~l~~~~k~~l~~ql~~D~~fL~~~~imDYSLLvGIh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (383)
T d1bo1a_ 207 DNDFLNE--GQKLHVGEESKKNFLEKLKRDVEFLAQLKIMDYSLLVGIHDVDRAEQEEMEVEERAEDEECENDGVGGNLL 284 (383)
T ss_dssp HHHHHHT--TCCCCCCSSHHHHHHHHHHHHHHHHHHHTCCSCCEEEEEEEHHHHHHHHHHHHHHTTTTC-----------
T ss_pred HHHHHHC--CCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 6778764--68823079999999999999999998778675043675512211112211001124555444555564322
Q ss_pred -----------------------------------------CCCEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCC
Q ss_conf -----------------------------------------783499948885403581236888776505899998851
Q 000313 1592 -----------------------------------------QRRELVCGIIDYLRQYTWDKHLETWVKSSLVPKNVLPTV 1630 (1679)
Q Consensus 1592 -----------------------------------------~~~~l~iGIID~Lr~Yt~~KklE~~~K~~~~~~~~~~Tv 1630 (1679)
++..||+|||||||+|||.||+|+++|++..+.+..+||
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyyiGIIDiLq~Y~~~KklE~~~Ksl~~~~g~~IS~ 364 (383)
T d1bo1a_ 285 CSYGTPPDSPGNLLSFPRFFGPGEFDPSVDVYAMKSHESSPKKEVYFMAIIDILTPYDTKKKAAHAAKTVKHGAGAEIST 364 (383)
T ss_dssp ------------------------CCSCCTTTSTTEEECSSTTEEEEEEECCSCC------------------CCCSSSC
T ss_pred CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 34578978830222155334664457776544544567899759999999971577968999999999921188989612
Q ss_pred CCHHHHHHHHHHHHHHHCC
Q ss_conf 4936799999999951134
Q 000313 1631 ISPKDYKRRFRKFMSTHFL 1649 (1679)
Q Consensus 1631 v~P~~Y~~RF~~~m~~yf~ 1649 (1679)
|+|++|++||++||+++|.
T Consensus 365 v~P~~Ya~RF~~Fi~~I~~ 383 (383)
T d1bo1a_ 365 VNPEQYSKRFNEFMSNILT 383 (383)
T ss_dssp CCHHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHHHCC
T ss_conf 7989999999999998649
|
| >d1gmla_ c.8.5.2 (A:) Thermosome, A-domain {Mouse (Mus musculus), gamma chain [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1q3qa2 c.8.5.2 (A:217-369) Thermosome, A-domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]} | Back information, alignment and structure |
|---|
| >d1assa_ c.8.5.2 (A:) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]} | Back information, alignment and structure |
|---|
| >d1a6db2 c.8.5.2 (B:216-367) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]} | Back information, alignment and structure |
|---|
| >d1q3qa3 d.56.1.2 (A:146-216,A:370-405) Thermosome, I domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]} | Back information, alignment and structure |
|---|
| >d1a6da3 d.56.1.2 (A:146-214,A:368-403) Thermosome, I domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]} | Back information, alignment and structure |
|---|
| >d1a6db3 d.56.1.2 (B:145-215,B:368-403) Thermosome, I domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]} | Back information, alignment and structure |
|---|
| >d1kida_ c.8.5.1 (A:) GroEL, A domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1srva_ c.8.5.1 (A:) GroEL, A domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1ioka2 c.8.5.1 (A:191-366) GroEL, A domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
| >d1sjpa2 c.8.5.1 (A:189-372) GroEL, A domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1w2fa_ d.143.1.3 (A:) Inositol 1,4,5-trisphosphate 3-kinase A, IP3K A {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|