Query 000316
Match_columns 1678
No_of_seqs 1405 out of 7948
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 04:04:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000316.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/000316hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4190 Uncharacterized conser 100.0 6.5E-65 1.4E-69 580.8 20.6 580 997-1678 417-1034(1034)
2 cd06071 Beach BEACH (Beige and 100.0 6.1E-66 1.3E-70 586.3 10.7 233 370-602 1-275 (275)
3 PF02138 Beach: Beige/BEACH do 100.0 2E-64 4.4E-69 575.3 4.6 233 370-602 1-270 (270)
4 PLN00181 protein SPA1-RELATED; 100.0 2.4E-46 5.1E-51 501.0 54.5 293 1323-1678 479-791 (793)
5 KOG0659 Cdk activating kinase 100.0 6E-48 1.3E-52 418.5 18.6 149 162-327 2-150 (318)
6 KOG0271 Notchless-like WD40 re 100.0 1.4E-45 3E-50 411.7 28.3 331 1276-1678 108-479 (480)
7 KOG0663 Protein kinase PITSLRE 100.0 8E-46 1.7E-50 412.0 18.4 158 155-329 69-228 (419)
8 KOG0600 Cdc2-related protein k 100.0 1.3E-44 2.9E-49 422.0 18.0 156 157-329 112-269 (560)
9 KOG0593 Predicted protein kina 100.0 1.1E-44 2.3E-49 398.2 13.9 152 161-329 1-152 (396)
10 KOG0615 Serine/threonine prote 100.0 8.2E-44 1.8E-48 406.3 15.8 178 160-362 170-351 (475)
11 KOG0661 MAPK related serine/th 100.0 8.5E-44 1.8E-48 412.4 13.4 175 157-361 5-181 (538)
12 KOG0660 Mitogen-activated prot 100.0 1.4E-42 3.1E-47 394.1 17.1 175 160-361 20-199 (359)
13 KOG0598 Ribosomal protein S6 k 100.0 6.1E-42 1.3E-46 390.6 19.6 174 161-362 24-198 (357)
14 KOG0575 Polo-like serine/threo 100.0 1.1E-41 2.3E-46 408.0 22.2 173 162-362 18-191 (592)
15 KOG0271 Notchless-like WD40 re 100.0 6.5E-40 1.4E-44 366.5 25.0 290 1317-1678 105-437 (480)
16 KOG0658 Glycogen synthase kina 100.0 2.4E-40 5.2E-45 376.6 16.5 146 163-329 25-177 (364)
17 KOG0594 Protein kinase PCTAIRE 100.0 3.9E-40 8.5E-45 376.5 18.2 152 161-328 10-170 (323)
18 KOG0605 NDR and related serine 100.0 1.1E-39 2.4E-44 384.8 20.1 151 160-327 139-290 (550)
19 KOG0662 Cyclin-dependent kinas 100.0 1.5E-39 3.2E-44 332.5 12.4 149 162-327 2-150 (292)
20 KOG0581 Mitogen-activated prot 100.0 8.2E-39 1.8E-43 365.0 19.7 184 161-376 78-264 (364)
21 KOG1787 Kinase A-anchor protei 100.0 3.1E-40 6.8E-45 425.0 4.8 240 368-607 470-755 (1126)
22 KOG0597 Serine-threonine prote 100.0 6.9E-39 1.5E-43 374.7 15.1 173 161-362 1-173 (808)
23 KOG0595 Serine/threonine-prote 100.0 5.3E-39 1.2E-43 368.5 13.5 211 159-398 7-222 (429)
24 KOG0588 Serine/threonine prote 100.0 1.1E-37 2.4E-42 372.7 18.5 177 158-363 8-185 (786)
25 KOG0694 Serine/threonine prote 100.0 4E-37 8.8E-42 372.0 18.7 176 158-362 364-541 (694)
26 KOG0666 Cyclin C-dependent kin 100.0 1.4E-37 3E-42 342.3 11.5 159 160-328 22-186 (438)
27 KOG0272 U4/U6 small nuclear ri 100.0 2.2E-36 4.7E-41 343.4 21.3 267 1288-1622 182-458 (459)
28 KOG0272 U4/U6 small nuclear ri 100.0 5.2E-36 1.1E-40 340.4 23.8 277 1325-1678 173-458 (459)
29 KOG1240 Protein kinase contain 100.0 8.3E-35 1.8E-39 362.4 36.6 314 1313-1678 1034-1431(1431)
30 KOG0667 Dual-specificity tyros 100.0 1.6E-36 3.4E-41 368.2 19.8 150 163-329 187-342 (586)
31 KOG0583 Serine/threonine prote 100.0 4.4E-36 9.5E-41 363.6 23.7 175 160-362 15-194 (370)
32 KOG0033 Ca2+/calmodulin-depend 100.0 2.2E-37 4.8E-42 330.9 4.4 175 160-362 9-185 (355)
33 KOG0592 3-phosphoinositide-dep 100.0 3E-36 6.5E-41 354.7 11.6 250 158-433 69-325 (604)
34 KOG0616 cAMP-dependent protein 100.0 2.8E-36 6.1E-41 332.1 10.0 211 160-408 42-254 (355)
35 KOG0198 MEKK and related serin 100.0 2.4E-35 5.2E-40 343.7 17.7 174 161-361 16-193 (313)
36 KOG0591 NIMA (never in mitosis 100.0 5.1E-37 1.1E-41 334.7 1.2 209 160-396 17-234 (375)
37 KOG0585 Ca2+/calmodulin-depend 100.0 1.4E-34 3E-39 335.1 14.4 190 155-361 90-287 (576)
38 KOG0286 G-protein beta subunit 100.0 2.2E-32 4.7E-37 298.5 30.5 280 1276-1622 48-343 (343)
39 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2E-33 4.3E-38 332.8 24.2 149 161-327 4-152 (288)
40 KOG0610 Putative serine/threon 100.0 1.7E-33 3.7E-38 322.9 22.4 153 161-328 76-229 (459)
41 KOG0599 Phosphorylase kinase g 100.0 3.1E-35 6.8E-40 318.3 6.7 176 161-362 16-195 (411)
42 KOG0582 Ste20-like serine/thre 100.0 3.5E-33 7.5E-38 322.2 23.8 182 156-361 20-202 (516)
43 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4.3E-33 9.3E-38 332.3 24.8 149 161-327 4-152 (303)
44 KOG0279 G protein beta subunit 100.0 7.3E-32 1.6E-36 293.3 31.3 283 1276-1624 8-313 (315)
45 KOG0578 p21-activated serine/t 100.0 1E-33 2.2E-38 337.2 16.8 170 160-361 271-441 (550)
46 KOG0286 G-protein beta subunit 100.0 1.3E-31 2.8E-36 292.4 31.5 282 1320-1678 48-343 (343)
47 KOG0669 Cyclin T-dependent kin 100.0 4E-35 8.6E-40 314.6 3.3 155 157-328 12-174 (376)
48 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.3E-32 2.8E-37 332.8 24.7 147 163-327 1-152 (338)
49 cd05612 STKc_PRKX_like Catalyt 100.0 8.7E-33 1.9E-37 327.9 22.1 150 162-328 1-151 (291)
50 KOG0279 G protein beta subunit 100.0 2.9E-31 6.2E-36 288.7 31.4 293 1319-1677 7-310 (315)
51 PTZ00263 protein kinase A cata 100.0 1.5E-32 3.3E-37 331.8 23.5 151 160-328 16-168 (329)
52 KOG0295 WD40 repeat-containing 100.0 2.1E-32 4.5E-37 306.2 21.9 288 1277-1622 102-404 (406)
53 KOG0032 Ca2+/calmodulin-depend 100.0 1.7E-32 3.7E-37 332.0 23.1 175 159-361 32-210 (382)
54 cd05571 STKc_PKB Catalytic dom 100.0 1.6E-32 3.5E-37 330.7 22.4 142 168-327 1-144 (323)
55 PTZ00036 glycogen synthase kin 100.0 1.9E-32 4.2E-37 343.2 24.0 147 161-328 65-221 (440)
56 KOG4717 Serine/threonine prote 100.0 4.9E-33 1.1E-37 321.3 16.4 178 157-362 13-191 (864)
57 cd07848 STKc_CDKL5 Catalytic d 100.0 3.8E-32 8.2E-37 321.0 23.5 149 162-327 1-149 (287)
58 KOG0319 WD40-repeat-containing 100.0 8.5E-32 1.8E-36 323.2 26.5 360 1282-1678 104-575 (775)
59 PTZ00426 cAMP-dependent protei 100.0 4E-32 8.7E-37 329.4 24.2 153 160-328 28-181 (340)
60 KOG0690 Serine/threonine prote 100.0 1.2E-33 2.7E-38 311.7 8.8 176 159-362 165-341 (516)
61 cd07862 STKc_CDK6 Catalytic do 100.0 5.4E-32 1.2E-36 320.2 22.9 151 162-327 1-159 (290)
62 cd05631 STKc_GRK4 Catalytic do 100.0 6E-32 1.3E-36 319.6 23.1 149 163-327 1-151 (285)
63 KOG0611 Predicted serine/threo 100.0 8.1E-34 1.8E-38 320.2 5.9 207 160-396 51-259 (668)
64 KOG0315 G-protein beta subunit 100.0 8.6E-31 1.9E-35 280.1 28.4 263 1299-1624 11-288 (311)
65 PHA03212 serine/threonine kina 100.0 4.3E-32 9.3E-37 335.0 21.4 180 161-376 91-270 (391)
66 cd07853 STKc_NLK Catalytic dom 100.0 1E-31 2.2E-36 330.1 23.1 147 163-327 1-152 (372)
67 cd05585 STKc_YPK1_like Catalyt 100.0 9.9E-32 2.1E-36 322.2 22.3 140 170-327 1-142 (312)
68 KOG0285 Pleiotropic regulator 100.0 5.5E-31 1.2E-35 292.9 25.6 295 1313-1677 137-436 (460)
69 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.6E-31 5.7E-36 317.8 24.6 149 161-327 5-153 (309)
70 cd05593 STKc_PKB_gamma Catalyt 100.0 1.9E-31 4E-36 322.1 23.4 142 168-327 1-144 (328)
71 cd05596 STKc_ROCK Catalytic do 100.0 1.9E-31 4.1E-36 327.4 23.9 173 161-361 42-215 (370)
72 KOG0318 WD40 repeat stress pro 100.0 9.6E-30 2.1E-34 295.4 35.7 377 1278-1678 142-600 (603)
73 KOG0201 Serine/threonine prote 100.0 1.2E-32 2.6E-37 318.3 11.0 171 162-362 13-184 (467)
74 cd07863 STKc_CDK4 Catalytic do 100.0 3E-31 6.5E-36 313.4 23.1 149 163-327 1-157 (288)
75 cd07876 STKc_JNK2 Catalytic do 100.0 4.5E-31 9.7E-36 322.8 25.4 148 160-327 19-172 (359)
76 KOG0295 WD40 repeat-containing 100.0 3.7E-31 8E-36 296.3 22.2 289 1312-1677 93-403 (406)
77 cd05595 STKc_PKB_beta Catalyti 100.0 2.7E-31 5.8E-36 320.0 22.7 142 168-327 1-144 (323)
78 cd07868 STKc_CDK8 Catalytic do 100.0 3.8E-31 8.3E-36 317.4 23.2 144 167-328 6-162 (317)
79 cd05589 STKc_PKN Catalytic dom 100.0 5.7E-31 1.2E-35 317.3 24.5 145 164-327 1-150 (324)
80 cd05590 STKc_nPKC_eta Catalyti 100.0 3.5E-31 7.7E-36 318.6 22.6 142 168-327 1-145 (320)
81 cd05614 STKc_MSK2_N N-terminal 100.0 4.3E-31 9.4E-36 319.3 23.0 151 163-327 1-154 (332)
82 cd05597 STKc_DMPK_like Catalyt 100.0 7.3E-31 1.6E-35 317.4 25.0 174 162-361 1-175 (331)
83 KOG0596 Dual specificity; seri 100.0 6.9E-32 1.5E-36 317.2 15.4 174 161-362 360-534 (677)
84 KOG0612 Rho-associated, coiled 100.0 1.6E-32 3.5E-37 344.0 10.5 175 161-362 74-249 (1317)
85 cd05587 STKc_cPKC Catalytic do 100.0 7E-31 1.5E-35 316.5 24.3 147 163-327 1-150 (324)
86 cd07874 STKc_JNK3 Catalytic do 100.0 7.1E-31 1.5E-35 320.5 24.5 148 160-327 15-168 (355)
87 cd07875 STKc_JNK1 Catalytic do 100.0 7.2E-31 1.6E-35 321.6 24.2 149 160-328 22-176 (364)
88 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.5E-31 7.7E-36 321.5 21.0 149 160-327 13-167 (343)
89 cd05594 STKc_PKB_alpha Catalyt 100.0 3.3E-31 7.2E-36 319.4 20.4 142 168-327 1-145 (325)
90 KOG0313 Microtubule binding pr 100.0 1.8E-30 3.9E-35 292.0 24.6 328 1253-1624 75-418 (423)
91 KOG0580 Serine/threonine prote 100.0 1.4E-32 3E-37 295.5 7.3 210 156-394 16-226 (281)
92 KOG0265 U5 snRNP-specific prot 100.0 3.3E-30 7.2E-35 282.8 25.7 280 1272-1620 36-334 (338)
93 cd05584 STKc_p70S6K Catalytic 100.0 7.3E-31 1.6E-35 316.2 22.6 146 167-327 1-149 (323)
94 cd05616 STKc_cPKC_beta Catalyt 100.0 1.3E-30 2.9E-35 314.0 23.9 147 163-327 1-150 (323)
95 cd05610 STKc_MASTL Catalytic d 100.0 2E-29 4.3E-34 330.4 37.0 188 161-376 3-192 (669)
96 cd05588 STKc_aPKC Catalytic do 100.0 9.3E-31 2E-35 316.2 22.5 143 168-327 1-145 (329)
97 KOG0296 Angio-associated migra 100.0 2.9E-29 6.2E-34 281.5 32.2 324 1273-1678 54-396 (399)
98 cd05620 STKc_nPKC_delta Cataly 100.0 1.3E-30 2.9E-35 313.0 22.8 142 168-327 1-145 (316)
99 cd05591 STKc_nPKC_epsilon Cata 100.0 1.1E-30 2.4E-35 314.4 22.0 142 168-327 1-145 (321)
100 PTZ00284 protein kinase; Provi 100.0 1.4E-30 3.1E-35 329.4 24.0 183 161-376 128-332 (467)
101 cd06649 PKc_MEK2 Catalytic dom 100.0 3.4E-30 7.3E-35 311.6 26.2 148 161-327 4-153 (331)
102 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.6E-30 5.6E-35 308.0 24.7 150 160-327 4-153 (301)
103 PLN00034 mitogen-activated pro 100.0 1.8E-30 3.9E-35 316.8 23.5 145 161-328 73-218 (353)
104 cd05623 STKc_MRCK_alpha Cataly 100.0 1.8E-30 4E-35 314.0 23.4 151 162-328 1-152 (332)
105 KOG1786 Lysosomal trafficking 100.0 5.6E-33 1.2E-37 368.6 1.5 241 366-606 335-630 (1081)
106 cd05592 STKc_nPKC_theta_delta 100.0 1.9E-30 4.1E-35 311.7 23.0 142 168-327 1-145 (316)
107 KOG0319 WD40-repeat-containing 100.0 9.9E-30 2.2E-34 305.5 28.4 359 1275-1677 139-616 (775)
108 KOG0281 Beta-TrCP (transducin 100.0 4E-31 8.6E-36 292.2 14.3 272 1283-1625 197-478 (499)
109 KOG0315 G-protein beta subunit 100.0 4E-29 8.7E-34 267.4 28.5 264 1340-1678 11-286 (311)
110 cd05570 STKc_PKC Catalytic dom 100.0 3.3E-30 7E-35 309.9 22.9 142 168-327 1-145 (318)
111 cd07861 STKc_CDK1_euk Catalyti 100.0 5.2E-30 1.1E-34 302.2 24.2 149 163-327 1-150 (285)
112 cd05619 STKc_nPKC_theta Cataly 100.0 3.2E-30 6.9E-35 309.7 22.7 142 168-327 1-145 (316)
113 PHA03209 serine/threonine kina 100.0 3.9E-30 8.5E-35 314.3 23.7 182 161-379 65-246 (357)
114 KOG0579 Ste20-like serine/thre 100.0 1.1E-31 2.4E-36 315.2 9.5 172 161-362 31-203 (1187)
115 cd05605 STKc_GRK4_like Catalyt 100.0 4.8E-30 1E-34 303.4 22.9 149 163-327 1-151 (285)
116 KOG0265 U5 snRNP-specific prot 100.0 2.6E-29 5.5E-34 275.8 26.1 282 1319-1676 39-334 (338)
117 KOG0263 Transcription initiati 100.0 1E-29 2.2E-34 309.5 25.4 231 1289-1585 386-651 (707)
118 cd07845 STKc_CDK10 Catalytic d 100.0 8.8E-30 1.9E-34 304.6 24.3 153 158-327 3-157 (309)
119 PTZ00283 serine/threonine prot 100.0 8.6E-30 1.9E-34 323.2 25.4 152 161-328 31-193 (496)
120 KOG0285 Pleiotropic regulator 100.0 2.5E-29 5.4E-34 279.8 25.2 282 1276-1624 144-439 (460)
121 cd07867 STKc_CDC2L6 Catalytic 100.0 1.2E-29 2.7E-34 304.0 23.9 143 167-327 6-161 (317)
122 KOG0263 Transcription initiati 100.0 4.3E-29 9.3E-34 304.1 28.6 286 1319-1669 370-704 (707)
123 cd05608 STKc_GRK1 Catalytic do 100.0 9.5E-30 2.1E-34 300.1 22.3 142 170-327 1-146 (280)
124 KOG0291 WD40-repeat-containing 100.0 7.8E-28 1.7E-32 288.6 37.2 360 1277-1678 139-548 (893)
125 KOG0273 Beta-transducin family 100.0 1.3E-28 2.8E-33 283.2 29.2 313 1282-1678 177-521 (524)
126 cd07839 STKc_CDK5 Catalytic do 100.0 8.2E-30 1.8E-34 300.5 19.9 148 163-327 1-148 (284)
127 PTZ00267 NIMA-related protein 100.0 3E-29 6.6E-34 317.8 26.2 150 162-328 67-219 (478)
128 KOG0266 WD40 repeat-containing 100.0 1.5E-28 3.3E-33 308.2 32.2 275 1283-1623 159-453 (456)
129 KOG4279 Serine/threonine prote 100.0 2E-30 4.3E-35 307.9 14.1 164 168-361 581-748 (1226)
130 cd05630 STKc_GRK6 Catalytic do 100.0 1.9E-29 4.1E-34 298.4 22.6 149 163-327 1-151 (285)
131 cd06650 PKc_MEK1 Catalytic dom 100.0 3.1E-29 6.6E-34 303.5 24.1 186 161-378 4-191 (333)
132 KOG0291 WD40-repeat-containing 100.0 9E-28 2E-32 288.1 36.0 318 1299-1678 278-610 (893)
133 PTZ00266 NIMA-related protein 100.0 3E-29 6.5E-34 326.6 24.9 175 161-361 12-213 (1021)
134 KOG0645 WD40 repeat protein [G 100.0 1E-27 2.2E-32 260.0 32.3 285 1319-1677 6-308 (312)
135 cd05607 STKc_GRK7 Catalytic do 100.0 3.5E-29 7.5E-34 294.8 22.6 143 170-327 1-144 (277)
136 cd08227 PK_STRAD_alpha Pseudok 100.0 4E-29 8.7E-34 301.6 23.0 145 166-326 2-149 (327)
137 KOG0284 Polyadenylation factor 100.0 1E-29 2.2E-34 287.9 16.2 277 1326-1678 95-378 (464)
138 KOG4645 MAPKKK (MAP kinase kin 100.0 4.6E-31 9.9E-36 334.8 6.0 177 161-362 1234-1411(1509)
139 KOG0282 mRNA splicing factor [ 100.0 1.2E-29 2.7E-34 293.1 17.1 286 1317-1678 204-503 (503)
140 KOG0316 Conserved WD40 repeat- 100.0 1.5E-28 3.2E-33 261.0 23.6 275 1276-1622 10-297 (307)
141 KOG0664 Nemo-like MAPK-related 100.0 7.1E-31 1.5E-35 284.0 5.5 149 161-327 52-205 (449)
142 cd07832 STKc_CCRK Catalytic do 100.0 9.7E-29 2.1E-33 291.3 24.0 148 163-327 1-148 (286)
143 cd06625 STKc_MEKK3_like Cataly 100.0 1.4E-28 3.1E-33 286.2 25.0 148 162-327 2-153 (263)
144 KOG4236 Serine/threonine prote 100.0 3.9E-30 8.5E-35 298.0 11.6 190 164-379 564-756 (888)
145 KOG0293 WD40 repeat-containing 100.0 2.8E-29 6.2E-34 283.6 18.2 286 1276-1585 217-515 (519)
146 cd07860 STKc_CDK2_3 Catalytic 100.0 7E-29 1.5E-33 292.5 22.5 149 163-327 1-149 (284)
147 KOG0273 Beta-transducin family 100.0 7E-28 1.5E-32 277.2 29.3 276 1288-1623 242-522 (524)
148 cd07841 STKc_CDK7 Catalytic do 100.0 1.7E-28 3.8E-33 291.4 24.9 149 163-327 1-151 (298)
149 cd07844 STKc_PCTAIRE_like Cata 100.0 1.1E-28 2.5E-33 292.0 23.2 148 161-326 4-151 (291)
150 KOG0284 Polyadenylation factor 100.0 2.3E-29 5E-34 285.0 16.3 276 1286-1629 101-385 (464)
151 cd05632 STKc_GRK5 Catalytic do 100.0 1.7E-28 3.6E-33 290.3 24.3 150 163-327 1-151 (285)
152 cd07849 STKc_ERK1_2_like Catal 100.0 1.6E-28 3.5E-33 297.5 24.7 148 160-327 3-155 (336)
153 cd00200 WD40 WD40 domain, foun 100.0 5.7E-27 1.2E-31 270.0 35.4 282 1320-1678 2-289 (289)
154 cd08223 STKc_Nek4 Catalytic do 100.0 4.4E-28 9.4E-33 281.1 26.3 149 163-327 1-151 (257)
155 KOG0281 Beta-TrCP (transducin 100.0 1.4E-29 2.9E-34 280.1 12.6 274 1326-1678 196-475 (499)
156 cd07843 STKc_CDC2L1 Catalytic 100.0 1.4E-28 3.1E-33 291.5 22.1 151 160-327 3-155 (293)
157 cd07865 STKc_CDK9 Catalytic do 100.0 3.5E-28 7.6E-33 290.0 25.2 156 155-327 5-168 (310)
158 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.8E-28 6E-33 287.4 23.7 148 162-327 1-149 (286)
159 cd07842 STKc_CDK8_like Catalyt 100.0 2.4E-28 5.1E-33 292.4 23.4 152 163-327 1-161 (316)
160 KOG0192 Tyrosine kinase specif 100.0 2.8E-29 6.2E-34 301.6 15.2 213 161-408 40-259 (362)
161 cd05628 STKc_NDR1 Catalytic do 100.0 5.4E-29 1.2E-33 305.0 18.0 211 162-390 1-236 (363)
162 cd07866 STKc_BUR1 Catalytic do 100.0 1.7E-28 3.6E-33 292.9 21.8 151 160-327 6-164 (311)
163 KOG0316 Conserved WD40 repeat- 100.0 1.2E-27 2.6E-32 254.1 25.6 275 1317-1672 7-292 (307)
164 cd05629 STKc_NDR_like_fungal C 100.0 6.6E-29 1.4E-33 305.8 18.8 206 162-385 1-243 (377)
165 cd07855 STKc_ERK5 Catalytic do 100.0 1E-28 2.3E-33 298.9 20.1 149 161-327 4-156 (334)
166 KOG0266 WD40 repeat-containing 100.0 2.2E-27 4.7E-32 297.8 32.3 281 1320-1677 151-451 (456)
167 KOG0318 WD40 repeat stress pro 100.0 1.5E-26 3.3E-31 268.9 36.5 330 1276-1678 52-515 (603)
168 cd05625 STKc_LATS1 Catalytic d 100.0 8.6E-29 1.9E-33 305.3 19.1 212 163-392 2-250 (382)
169 cd07837 STKc_CdkB_plant Cataly 100.0 3.8E-28 8.2E-33 288.0 23.8 149 162-326 1-159 (295)
170 KOG0668 Casein kinase II, alph 100.0 1.2E-29 2.6E-34 269.5 9.5 143 160-327 36-182 (338)
171 cd05580 STKc_PKA Catalytic dom 100.0 6.2E-28 1.3E-32 286.0 25.5 148 162-327 1-150 (290)
172 KOG0292 Vesicle coat complex C 100.0 1.5E-27 3.2E-32 288.9 28.8 320 1288-1669 16-384 (1202)
173 cd07870 STKc_PFTAIRE2 Catalyti 100.0 6.6E-28 1.4E-32 285.6 25.6 149 161-327 4-152 (291)
174 PLN00009 cyclin-dependent kina 100.0 4E-28 8.6E-33 287.9 23.6 151 162-327 2-152 (294)
175 cd08529 STKc_FA2-like Catalyti 100.0 8.9E-28 1.9E-32 278.1 25.6 149 163-327 1-150 (256)
176 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.8E-28 6.1E-33 295.5 22.3 150 160-327 3-157 (337)
177 cd00200 WD40 WD40 domain, foun 100.0 1.2E-26 2.7E-31 267.2 34.9 277 1278-1622 4-289 (289)
178 cd06644 STKc_STK10_LOK Catalyt 100.0 7.6E-28 1.6E-32 285.4 25.3 148 161-327 11-159 (292)
179 cd06615 PKc_MEK Catalytic doma 100.0 8E-28 1.7E-32 287.8 25.6 146 162-326 1-148 (308)
180 cd06637 STKc_TNIK Catalytic do 100.0 5.6E-28 1.2E-32 282.8 23.5 148 161-327 5-160 (272)
181 cd05626 STKc_LATS2 Catalytic d 100.0 1.3E-28 2.9E-33 303.5 19.0 205 163-385 2-243 (381)
182 cd05598 STKc_LATS Catalytic do 100.0 1.1E-28 2.5E-33 303.6 18.3 205 162-384 1-238 (376)
183 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4.5E-28 9.8E-33 286.1 22.4 149 162-327 1-152 (286)
184 KOG0306 WD40-repeat-containing 100.0 3.5E-27 7.7E-32 282.9 29.9 367 1274-1677 98-661 (888)
185 cd05574 STKc_phototropin_like 100.0 1.2E-27 2.6E-32 287.0 26.0 152 162-329 1-154 (316)
186 cd06643 STKc_SLK Catalytic dom 100.0 8.3E-28 1.8E-32 283.4 24.1 146 163-327 6-152 (282)
187 KOG0276 Vesicle coat complex C 100.0 4.4E-27 9.6E-32 276.8 29.2 280 1279-1623 9-297 (794)
188 cd05599 STKc_NDR_like Catalyti 100.0 1.5E-28 3.3E-33 300.9 17.9 201 162-379 1-229 (364)
189 cd06619 PKc_MKK5 Catalytic dom 100.0 1.1E-27 2.4E-32 282.2 24.4 143 162-327 1-144 (279)
190 cd06631 STKc_YSK4 Catalytic do 100.0 1.3E-27 2.8E-32 278.9 24.5 150 163-327 1-151 (265)
191 KOG0608 Warts/lats-like serine 100.0 3.7E-29 8.1E-34 295.2 11.5 227 163-408 630-888 (1034)
192 cd07854 STKc_MAPK4_6 Catalytic 100.0 5.9E-28 1.3E-32 293.4 22.4 147 161-327 4-164 (342)
193 cd06611 STKc_SLK_like Catalyti 100.0 5.7E-28 1.2E-32 284.4 21.6 148 161-327 4-152 (280)
194 cd07846 STKc_CDKL2_3 Catalytic 100.0 4.4E-28 9.6E-33 285.8 20.7 148 162-327 1-149 (286)
195 KOG0574 STE20-like serine/thre 100.0 2.4E-30 5.1E-35 282.9 1.1 197 163-398 34-232 (502)
196 KOG0645 WD40 repeat protein [G 100.0 1.2E-26 2.6E-31 251.8 29.4 277 1276-1624 7-311 (312)
197 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.6E-27 3.5E-32 278.1 24.7 151 163-327 1-155 (267)
198 KOG0665 Jun-N-terminal kinase 100.0 7.1E-29 1.5E-33 276.7 12.3 146 161-327 16-167 (369)
199 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.4E-27 2.9E-32 281.3 24.0 149 162-327 1-153 (283)
200 cd08218 STKc_Nek1 Catalytic do 100.0 1.8E-27 4E-32 275.9 24.5 148 163-326 1-149 (256)
201 cd07831 STKc_MOK Catalytic dom 100.0 9.6E-28 2.1E-32 282.2 22.5 145 164-327 1-148 (282)
202 KOG0589 Serine/threonine prote 100.0 2.4E-29 5.1E-34 299.9 8.8 204 161-392 3-208 (426)
203 cd05609 STKc_MAST Catalytic do 100.0 2.6E-27 5.6E-32 282.8 26.4 148 162-327 1-150 (305)
204 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.4E-27 2.9E-32 290.3 24.4 149 160-327 13-167 (343)
205 cd08221 STKc_Nek9 Catalytic do 100.0 2.6E-27 5.5E-32 274.7 25.6 149 163-327 1-150 (256)
206 cd06654 STKc_PAK1 Catalytic do 100.0 2E-27 4.4E-32 282.7 25.2 150 157-327 15-165 (296)
207 cd06645 STKc_MAP4K3 Catalytic 100.0 7.2E-28 1.6E-32 281.3 21.0 147 161-327 8-155 (267)
208 KOG0293 WD40 repeat-containing 100.0 1E-27 2.2E-32 271.1 21.2 282 1319-1677 216-510 (519)
209 PTZ00024 cyclin-dependent prot 100.0 1.2E-27 2.7E-32 289.5 23.2 158 160-327 6-168 (335)
210 cd06646 STKc_MAP4K5 Catalytic 100.0 1.8E-27 3.9E-32 277.9 23.7 147 161-327 8-155 (267)
211 cd06630 STKc_MEKK1 Catalytic d 100.0 1.4E-27 3.1E-32 278.6 22.6 148 163-327 1-153 (268)
212 cd07836 STKc_Pho85 Catalytic d 100.0 1.3E-27 2.9E-32 281.5 22.5 148 163-327 1-149 (284)
213 cd06651 STKc_MEKK3 Catalytic d 100.0 2.4E-27 5.2E-32 277.1 24.4 148 163-327 3-155 (266)
214 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.6E-27 5.7E-32 288.0 25.6 149 160-327 15-169 (345)
215 cd06656 STKc_PAK3 Catalytic do 100.0 2.3E-27 5E-32 282.4 24.5 148 159-327 16-164 (297)
216 cd07835 STKc_CDK1_like Catalyt 100.0 1.6E-27 3.5E-32 280.8 22.9 148 164-327 1-148 (283)
217 cd08220 STKc_Nek8 Catalytic do 100.0 4.6E-27 1E-31 272.2 25.7 150 163-327 1-151 (256)
218 cd05627 STKc_NDR2 Catalytic do 100.0 5.3E-28 1.2E-32 295.9 18.6 205 162-384 1-230 (360)
219 cd05621 STKc_ROCK2 Catalytic d 100.0 4.5E-28 9.7E-33 297.4 17.8 197 161-386 42-243 (370)
220 cd05633 STKc_GRK3 Catalytic do 100.0 1.9E-27 4.2E-32 280.4 22.6 142 169-327 1-146 (279)
221 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 5.3E-28 1.2E-32 292.6 18.2 190 162-384 1-192 (333)
222 cd07834 STKc_MAPK Catalytic do 100.0 1.1E-27 2.4E-32 289.1 20.6 147 163-327 1-152 (330)
223 cd07879 STKc_p38delta_MAPK13 C 100.0 2.8E-27 6E-32 287.5 24.0 148 160-327 13-166 (342)
224 KOG0586 Serine/threonine prote 100.0 3.3E-28 7E-33 292.7 15.0 215 159-404 53-269 (596)
225 cd06610 STKc_OSR1_SPAK Catalyt 100.0 6.2E-27 1.3E-31 272.7 25.1 149 162-327 1-151 (267)
226 cd07857 STKc_MPK1 Catalytic do 100.0 4E-27 8.8E-32 284.8 24.2 149 163-327 1-154 (332)
227 cd07851 STKc_p38 Catalytic dom 100.0 2.4E-27 5.2E-32 288.2 22.3 149 160-327 13-167 (343)
228 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3.6E-27 7.9E-32 277.8 23.2 148 161-327 15-170 (282)
229 KOG0603 Ribosomal protein S6 k 100.0 4.2E-28 9.2E-33 293.2 15.4 145 160-329 320-467 (612)
230 cd06655 STKc_PAK2 Catalytic do 100.0 5.5E-27 1.2E-31 279.0 24.8 146 161-327 18-164 (296)
231 cd08226 PK_STRAD_beta Pseudoki 100.0 1.4E-27 3E-32 288.3 19.1 143 168-326 4-149 (328)
232 cd07852 STKc_MAPK15 Catalytic 100.0 2.7E-27 5.8E-32 286.9 21.6 149 160-327 5-156 (337)
233 PLN00181 protein SPA1-RELATED; 100.0 8.3E-26 1.8E-30 303.3 38.1 277 1278-1623 478-792 (793)
234 cd07864 STKc_CDK12 Catalytic d 99.9 4.5E-27 9.7E-32 279.7 22.9 150 161-327 6-165 (302)
235 KOG0197 Tyrosine kinases [Sign 99.9 2.4E-28 5.1E-33 291.8 11.8 209 163-407 207-417 (468)
236 cd06638 STKc_myosinIIIA Cataly 99.9 6.3E-27 1.4E-31 276.2 23.9 149 160-327 16-173 (286)
237 cd08225 STKc_Nek5 Catalytic do 99.9 5.8E-27 1.3E-31 271.5 23.2 150 163-327 1-151 (257)
238 cd06639 STKc_myosinIIIB Cataly 99.9 1.1E-26 2.4E-31 275.2 25.8 148 161-327 21-177 (291)
239 cd05622 STKc_ROCK1 Catalytic d 99.9 1.3E-27 2.9E-32 293.4 18.5 203 161-392 42-249 (371)
240 cd06607 STKc_TAO Catalytic dom 99.9 1.1E-26 2.3E-31 277.8 25.5 150 161-327 14-164 (307)
241 cd05573 STKc_ROCK_NDR_like Cat 99.9 1.2E-27 2.7E-32 291.1 17.0 201 162-379 1-220 (350)
242 cd07856 STKc_Sty1_Hog1 Catalyt 99.9 8.8E-27 1.9E-31 281.5 24.1 148 160-326 8-156 (328)
243 cd05061 PTKc_InsR Catalytic do 99.9 1.6E-26 3.5E-31 273.6 25.5 155 161-327 5-168 (288)
244 cd06629 STKc_MAPKKK_Bck1_like 99.9 1.5E-26 3.2E-31 271.0 24.9 151 163-327 2-157 (272)
245 cd06609 STKc_MST3_like Catalyt 99.9 9.2E-27 2E-31 273.2 22.9 147 162-328 1-148 (274)
246 cd05577 STKc_GRK Catalytic dom 99.9 6.5E-27 1.4E-31 275.2 21.6 142 170-327 1-144 (277)
247 cd05578 STKc_Yank1 Catalytic d 99.9 6.1E-27 1.3E-31 272.0 21.1 147 163-327 1-149 (258)
248 cd06605 PKc_MAPKK Catalytic do 99.9 4.5E-27 9.8E-32 273.9 19.6 147 162-326 1-149 (265)
249 cd06608 STKc_myosinIII_like Ca 99.9 1.3E-26 2.8E-31 270.9 23.5 148 161-327 5-162 (275)
250 KOG1290 Serine/threonine prote 99.9 1.2E-26 2.6E-31 270.2 22.6 147 150-313 66-225 (590)
251 cd06632 STKc_MEKK1_plant Catal 99.9 1.8E-26 3.8E-31 267.4 24.3 147 163-327 1-151 (258)
252 cd05606 STKc_beta_ARK Catalyti 99.9 1.1E-26 2.4E-31 273.6 22.9 144 169-327 1-146 (278)
253 cd06612 STKc_MST1_2 Catalytic 99.9 1.2E-26 2.6E-31 268.6 22.4 146 161-327 2-148 (256)
254 cd08217 STKc_Nek2 Catalytic do 99.9 2.6E-26 5.5E-31 266.7 25.1 149 163-327 1-159 (265)
255 cd07838 STKc_CDK4_6_like Catal 99.9 1.6E-26 3.4E-31 272.4 23.6 148 164-327 1-156 (287)
256 cd05624 STKc_MRCK_beta Catalyt 99.9 3.5E-27 7.6E-32 285.3 18.2 192 162-379 1-198 (331)
257 KOG0296 Angio-associated migra 99.9 7.8E-26 1.7E-30 254.0 27.5 291 1275-1624 98-398 (399)
258 cd06624 STKc_ASK Catalytic dom 99.9 3.3E-26 7.1E-31 267.7 25.4 143 166-327 12-158 (268)
259 KOG0643 Translation initiation 99.9 5.7E-26 1.2E-30 245.6 25.0 287 1323-1677 6-314 (327)
260 cd05572 STKc_cGK_PKG Catalytic 99.9 1.6E-26 3.4E-31 269.3 22.5 141 170-327 1-142 (262)
261 KOG0607 MAP kinase-interacting 99.9 3.2E-28 7E-33 269.3 7.7 211 161-394 76-295 (463)
262 KOG0282 mRNA splicing factor [ 99.9 3.5E-27 7.7E-32 272.9 16.4 279 1276-1622 207-503 (503)
263 cd06633 STKc_TAO3 Catalytic do 99.9 4.8E-26 1E-30 273.2 26.9 149 161-326 20-169 (313)
264 cd07840 STKc_CDK9_like Catalyt 99.9 2.7E-26 5.9E-31 270.2 24.2 147 164-327 1-149 (287)
265 cd06659 STKc_PAK6 Catalytic do 99.9 1.1E-26 2.3E-31 276.7 20.9 143 163-326 22-165 (297)
266 cd06626 STKc_MEKK4 Catalytic d 99.9 5.4E-26 1.2E-30 264.5 26.4 147 163-327 1-148 (264)
267 KOG0306 WD40-repeat-containing 99.9 2E-25 4.3E-30 268.1 31.2 351 1284-1677 66-577 (888)
268 cd05601 STKc_CRIK Catalytic do 99.9 5E-27 1.1E-31 283.7 17.9 192 162-379 1-199 (330)
269 cd06658 STKc_PAK5 Catalytic do 99.9 1E-26 2.3E-31 276.1 20.2 145 162-327 22-167 (292)
270 cd06640 STKc_MST4 Catalytic do 99.9 2.3E-26 5E-31 270.5 22.8 146 162-327 4-150 (277)
271 cd06917 STKc_NAK1_like Catalyt 99.9 2.8E-26 6.2E-31 269.3 23.5 145 163-327 2-150 (277)
272 cd06620 PKc_MAPKK_Byr1_like Ca 99.9 1.7E-26 3.8E-31 272.6 21.7 147 161-326 4-152 (284)
273 cd06621 PKc_MAPKK_Pek1_like Ca 99.9 6.2E-26 1.3E-30 268.5 26.4 148 162-326 1-153 (287)
274 cd08216 PK_STRAD Pseudokinase 99.9 1.1E-26 2.4E-31 278.3 20.0 145 165-327 5-150 (314)
275 PHA03390 pk1 serine/threonine- 99.9 2.5E-26 5.4E-31 269.2 22.4 143 161-327 13-159 (267)
276 KOG0577 Serine/threonine prote 99.9 5.2E-28 1.1E-32 284.0 7.7 182 163-376 27-212 (948)
277 KOG0276 Vesicle coat complex C 99.9 6.7E-26 1.5E-30 266.9 25.1 280 1321-1676 7-295 (794)
278 KOG0695 Serine/threonine prote 99.9 8.5E-28 1.8E-32 265.9 8.6 208 156-398 244-453 (593)
279 cd08215 STKc_Nek Catalytic dom 99.9 7.5E-26 1.6E-30 261.4 25.4 149 163-327 1-152 (258)
280 cd07830 STKc_MAK_like Catalyti 99.9 2.5E-26 5.4E-31 270.5 21.6 147 164-327 1-148 (283)
281 cd06616 PKc_MKK4 Catalytic dom 99.9 1.5E-26 3.3E-31 273.4 19.8 149 162-327 4-157 (288)
282 PHA03207 serine/threonine kina 99.9 2.3E-26 4.9E-31 284.7 22.0 187 161-379 91-277 (392)
283 cd06635 STKc_TAO1 Catalytic do 99.9 6.1E-26 1.3E-30 272.7 25.0 149 161-326 24-173 (317)
284 cd05575 STKc_SGK Catalytic dom 99.9 9.7E-27 2.1E-31 280.4 18.1 187 168-384 1-190 (323)
285 cd05118 STKc_CMGC Catalytic do 99.9 2.1E-26 4.6E-31 270.7 20.5 147 164-327 1-147 (283)
286 cd05603 STKc_SGK2 Catalytic do 99.9 8.5E-27 1.8E-31 280.6 17.5 183 168-379 1-186 (321)
287 cd05581 STKc_PDK1 Catalytic do 99.9 3.4E-26 7.3E-31 268.4 21.8 151 162-329 1-153 (280)
288 cd05604 STKc_SGK3 Catalytic do 99.9 1E-26 2.2E-31 280.5 17.7 187 168-384 1-190 (325)
289 cd06641 STKc_MST3 Catalytic do 99.9 6E-26 1.3E-30 267.0 23.7 145 163-327 5-150 (277)
290 cd05611 STKc_Rim15_like Cataly 99.9 4.2E-26 9E-31 265.4 22.0 141 168-326 2-145 (260)
291 KOG0274 Cdc4 and related F-box 99.9 1.5E-25 3.2E-30 280.8 28.2 255 1301-1624 221-482 (537)
292 cd06623 PKc_MAPKK_plant_like C 99.9 6.8E-26 1.5E-30 263.4 23.6 147 162-327 1-149 (264)
293 cd06648 STKc_PAK_II Catalytic 99.9 1.1E-25 2.4E-30 266.3 25.4 143 163-326 20-163 (285)
294 cd07829 STKc_CDK_like Catalyti 99.9 3.7E-26 8.1E-31 268.5 21.2 147 164-327 1-147 (282)
295 cd05615 STKc_cPKC_alpha Cataly 99.9 1.1E-26 2.5E-31 279.9 17.1 188 163-379 1-191 (323)
296 cd05602 STKc_SGK1 Catalytic do 99.9 1.2E-26 2.5E-31 280.0 17.1 183 168-379 1-186 (325)
297 cd05613 STKc_MSK1_N N-terminal 99.9 8.1E-26 1.8E-30 267.6 23.7 151 163-327 1-154 (290)
298 cd05582 STKc_RSK_N N-terminal 99.9 1.2E-26 2.6E-31 279.0 16.6 187 167-379 1-188 (318)
299 cd05618 STKc_aPKC_iota Catalyt 99.9 2E-26 4.4E-31 278.5 18.3 192 168-394 1-194 (329)
300 cd05102 PTKc_VEGFR3 Catalytic 99.9 1.2E-26 2.6E-31 281.3 16.2 198 161-379 6-266 (338)
301 cd06634 STKc_TAO2 Catalytic do 99.9 8.9E-26 1.9E-30 270.1 23.4 150 161-327 14-164 (308)
302 KOG0986 G protein-coupled rece 99.9 1.4E-27 3.1E-32 275.1 7.1 201 161-395 184-385 (591)
303 cd06627 STKc_Cdc7_like Catalyt 99.9 2.6E-25 5.6E-30 256.8 25.9 147 163-327 1-148 (254)
304 cd06606 STKc_MAPKKK Catalytic 99.9 2.2E-25 4.9E-30 257.2 25.1 147 163-327 1-150 (260)
305 cd08530 STKc_CNK2-like Catalyt 99.9 1.7E-25 3.6E-30 258.9 23.9 149 163-327 1-152 (256)
306 KOG1187 Serine/threonine prote 99.9 2.2E-26 4.7E-31 278.6 17.0 202 161-398 74-280 (361)
307 cd05579 STKc_MAST_like Catalyt 99.9 1.1E-25 2.3E-30 261.5 21.7 140 170-327 1-142 (265)
308 cd05617 STKc_aPKC_zeta Catalyt 99.9 2.8E-26 6.1E-31 276.9 17.0 184 168-379 1-186 (327)
309 PLN03225 Serine/threonine-prot 99.9 9E-26 2E-30 289.1 22.2 175 159-361 129-329 (566)
310 KOG1407 WD40 repeat protein [F 99.9 6E-25 1.3E-29 237.3 24.7 277 1321-1677 14-308 (313)
311 cd08222 STKc_Nek11 Catalytic d 99.9 1.3E-25 2.7E-30 261.3 21.3 148 163-327 1-154 (260)
312 KOG4721 Serine/threonine prote 99.9 2.7E-27 5.9E-32 277.1 7.1 213 166-427 128-345 (904)
313 cd06618 PKc_MKK7 Catalytic dom 99.9 2.3E-25 5E-30 264.8 23.7 149 161-327 14-164 (296)
314 KOG4250 TANK binding protein k 99.9 6.4E-27 1.4E-31 284.5 10.3 191 162-379 13-214 (732)
315 cd06657 STKc_PAK4 Catalytic do 99.9 2.1E-25 4.6E-30 265.0 22.5 142 164-326 22-164 (292)
316 KOG0300 WD40 repeat-containing 99.9 3.9E-25 8.4E-30 242.3 22.5 333 1301-1677 127-473 (481)
317 KOG0696 Serine/threonine prote 99.9 3.8E-27 8.3E-32 267.0 7.0 205 161-394 348-554 (683)
318 KOG0275 Conserved WD40 repeat- 99.9 8.4E-26 1.8E-30 247.7 17.0 268 1289-1622 221-507 (508)
319 PRK13184 pknD serine/threonine 99.9 7.5E-26 1.6E-30 294.2 19.5 209 161-386 1-227 (932)
320 cd05586 STKc_Sck1_like Catalyt 99.9 5.4E-26 1.2E-30 274.8 15.8 181 170-379 1-187 (330)
321 cd05122 PKc_STE Catalytic doma 99.9 9.2E-25 2E-29 251.0 25.2 146 163-327 1-147 (253)
322 cd05096 PTKc_DDR1 Catalytic do 99.9 1E-25 2.2E-30 268.9 17.6 199 161-379 4-230 (304)
323 KOG1152 Signal transduction se 99.9 1.8E-26 3.8E-31 272.2 10.5 196 159-379 558-759 (772)
324 KOG0274 Cdc4 and related F-box 99.9 1.9E-24 4E-29 270.9 29.1 274 1321-1678 201-480 (537)
325 KOG0193 Serine/threonine prote 99.9 5.8E-26 1.3E-30 271.1 13.9 196 163-389 393-592 (678)
326 PHA03211 serine/threonine kina 99.9 2E-25 4.3E-30 279.5 19.4 189 160-383 167-355 (461)
327 cd05106 PTKc_CSF-1R Catalytic 99.9 1.1E-25 2.4E-30 276.8 16.0 197 161-378 37-303 (374)
328 KOG0194 Protein tyrosine kinas 99.9 8.4E-26 1.8E-30 274.6 14.3 215 163-408 158-376 (474)
329 KOG0292 Vesicle coat complex C 99.9 1.4E-24 3E-29 263.4 24.4 280 1321-1675 3-317 (1202)
330 cd05123 STKc_AGC Catalytic dom 99.9 1.1E-24 2.3E-29 251.5 22.2 141 170-327 1-142 (250)
331 cd05064 PTKc_EphR_A10 Catalyti 99.9 1.2E-25 2.7E-30 262.8 14.5 194 161-379 4-198 (266)
332 PLN03224 probable serine/threo 99.9 1.6E-24 3.5E-29 271.0 24.8 189 160-362 143-383 (507)
333 cd05104 PTKc_Kit Catalytic dom 99.9 2.6E-25 5.6E-30 273.7 16.1 198 161-379 34-306 (375)
334 KOG0313 Microtubule binding pr 99.9 4.8E-24 1E-28 240.5 24.7 276 1326-1677 104-415 (423)
335 KOG0278 Serine/threonine kinas 99.9 8.7E-25 1.9E-29 234.0 17.6 277 1321-1677 8-294 (334)
336 PF00069 Pkinase: Protein kina 99.9 3.1E-25 6.7E-30 257.3 15.5 187 164-379 1-189 (260)
337 KOG0288 WD40 repeat protein Ti 99.9 2.6E-25 5.5E-30 252.9 14.3 284 1318-1678 166-459 (459)
338 KOG0604 MAP kinase-activated p 99.9 2.7E-26 5.8E-31 253.0 6.1 191 156-379 55-253 (400)
339 KOG0643 Translation initiation 99.9 1.2E-23 2.7E-28 227.6 26.3 286 1278-1624 5-317 (327)
340 KOG0275 Conserved WD40 repeat- 99.9 4.3E-25 9.3E-30 242.2 14.0 277 1325-1678 211-507 (508)
341 KOG1989 ARK protein kinase fam 99.9 1.7E-25 3.7E-30 280.5 12.4 197 163-379 38-248 (738)
342 cd08219 STKc_Nek3 Catalytic do 99.9 1.6E-24 3.4E-29 251.4 19.2 189 163-379 1-190 (255)
343 PHA03210 serine/threonine kina 99.9 4.7E-25 1E-29 280.8 16.0 195 160-379 146-358 (501)
344 KOG0268 Sof1-like rRNA process 99.9 7.6E-25 1.6E-29 245.2 15.3 279 1319-1677 58-342 (433)
345 KOG0614 cGMP-dependent protein 99.9 1.1E-26 2.4E-31 269.8 0.6 202 161-392 419-621 (732)
346 cd05105 PTKc_PDGFR_alpha Catal 99.9 1.1E-24 2.3E-29 269.6 17.7 198 161-379 36-329 (400)
347 KOG0308 Conserved WD40 repeat- 99.9 4.4E-24 9.6E-29 253.7 21.5 324 1301-1678 40-391 (735)
348 cd05108 PTKc_EGFR Catalytic do 99.9 2E-24 4.3E-29 259.4 17.5 195 161-379 6-201 (316)
349 KOG0283 WD40 repeat-containing 99.9 9.9E-24 2.1E-28 259.9 23.5 240 1319-1623 258-575 (712)
350 cd05048 PTKc_Ror Catalytic Dom 99.9 1.1E-24 2.3E-29 256.8 14.1 198 161-379 4-216 (283)
351 KOG1035 eIF-2alpha kinase GCN2 99.9 2.1E-25 4.7E-30 282.8 8.5 206 158-384 475-812 (1351)
352 cd05090 PTKc_Ror1 Catalytic do 99.9 2.4E-24 5.1E-29 254.2 16.9 197 161-379 4-216 (283)
353 cd05054 PTKc_VEGFR Catalytic d 99.9 1.4E-24 3E-29 263.3 15.1 198 161-379 6-265 (337)
354 cd05062 PTKc_IGF-1R Catalytic 99.9 3E-24 6.5E-29 252.5 16.6 198 161-379 5-211 (277)
355 KOG0283 WD40 repeat-containing 99.9 1.6E-23 3.5E-28 258.1 23.1 242 1281-1584 265-577 (712)
356 cd05033 PTKc_EphR Catalytic do 99.9 2.4E-24 5.2E-29 251.6 15.4 195 161-379 3-198 (266)
357 KOG0278 Serine/threonine kinas 99.9 5.3E-24 1.1E-28 228.0 16.4 276 1277-1624 8-297 (334)
358 KOG0300 WD40 repeat-containing 99.9 2.8E-23 6.2E-28 227.7 22.5 283 1276-1624 141-476 (481)
359 cd05072 PTKc_Lyn Catalytic dom 99.9 2.9E-24 6.3E-29 250.0 15.8 189 161-379 5-194 (261)
360 PHA02988 hypothetical protein; 99.9 1.7E-24 3.7E-29 256.0 14.1 184 168-385 26-217 (283)
361 cd07850 STKc_JNK Catalytic dom 99.9 3E-24 6.5E-29 262.0 16.6 188 160-379 14-207 (353)
362 KOG0671 LAMMER dual specificit 99.9 4.8E-25 1E-29 251.7 8.8 201 161-393 88-312 (415)
363 cd05052 PTKc_Abl Catalytic dom 99.9 3.8E-24 8.2E-29 249.6 16.7 190 161-379 5-195 (263)
364 cd05066 PTKc_EphR_A Catalytic 99.9 2.5E-24 5.5E-29 251.7 15.1 196 161-379 3-199 (267)
365 cd08228 STKc_Nek6 Catalytic do 99.9 4.5E-24 9.8E-29 249.1 17.0 199 162-394 2-204 (267)
366 cd05114 PTKc_Tec_Rlk Catalytic 99.9 4.4E-24 9.6E-29 247.9 16.6 187 162-379 4-191 (256)
367 cd05049 PTKc_Trk Catalytic dom 99.9 1.5E-24 3.3E-29 255.0 12.4 198 161-379 4-214 (280)
368 cd05065 PTKc_EphR_B Catalytic 99.9 3.6E-24 7.7E-29 250.6 15.4 198 161-379 3-201 (269)
369 PTZ00420 coronin; Provisional 99.9 1.7E-22 3.8E-27 253.9 31.5 246 1303-1606 49-317 (568)
370 cd06652 STKc_MEKK2 Catalytic d 99.9 6.7E-24 1.5E-28 247.7 17.6 193 162-379 2-199 (265)
371 KOG2345 Serine/threonine prote 99.9 6.3E-25 1.4E-29 237.5 8.1 199 161-379 20-231 (302)
372 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.9 8.1E-24 1.8E-28 249.6 18.3 194 162-379 3-200 (283)
373 KOG0984 Mitogen-activated prot 99.9 1E-24 2.2E-29 229.5 9.3 200 161-396 45-252 (282)
374 cd05035 PTKc_Axl_like Catalyti 99.9 6.1E-24 1.3E-28 248.5 16.8 194 164-379 1-205 (273)
375 cd05053 PTKc_FGFR Catalytic do 99.9 1E-23 2.2E-28 250.0 18.6 198 161-379 11-224 (293)
376 KOG0640 mRNA cleavage stimulat 99.9 2.4E-23 5.1E-28 228.4 19.7 287 1320-1677 105-423 (430)
377 cd05093 PTKc_TrkB Catalytic do 99.9 6.9E-24 1.5E-28 251.1 17.0 197 161-379 4-212 (288)
378 cd05101 PTKc_FGFR2 Catalytic d 99.9 6.7E-24 1.5E-28 253.2 16.8 199 161-379 14-229 (304)
379 KOG0196 Tyrosine kinase, EPH ( 99.9 1.1E-24 2.5E-29 264.6 9.9 231 163-423 630-864 (996)
380 KOG1095 Protein tyrosine kinas 99.9 3.4E-24 7.4E-29 276.3 14.9 222 161-408 691-918 (1025)
381 cd05051 PTKc_DDR Catalytic dom 99.9 9E-24 1.9E-28 250.7 17.4 199 161-379 4-222 (296)
382 KOG0277 Peroxisomal targeting 99.9 5.5E-23 1.2E-27 221.3 21.4 278 1331-1678 12-307 (311)
383 cd05084 PTKc_Fes Catalytic dom 99.9 7.4E-24 1.6E-28 245.3 15.9 185 168-379 1-186 (252)
384 cd05068 PTKc_Frk_like Catalyti 99.9 1.1E-23 2.4E-28 245.4 17.3 189 161-379 5-194 (261)
385 cd05055 PTKc_PDGFR Catalytic d 99.9 1.1E-23 2.4E-28 251.5 17.1 198 161-379 34-233 (302)
386 cd05032 PTKc_InsR_like Catalyt 99.9 1.1E-23 2.4E-28 247.3 16.8 198 161-379 5-211 (277)
387 cd05116 PTKc_Syk Catalytic dom 99.9 9.1E-24 2E-28 245.6 16.0 187 168-379 1-188 (257)
388 cd06613 STKc_MAP4K3_like Catal 99.9 1.6E-23 3.5E-28 243.4 17.9 189 161-379 2-194 (262)
389 cd05071 PTKc_Src Catalytic dom 99.9 9.1E-24 2E-28 246.5 15.8 188 161-379 5-193 (262)
390 cd05091 PTKc_Ror2 Catalytic do 99.9 4.7E-24 1E-28 251.5 13.3 198 161-379 4-216 (283)
391 cd05098 PTKc_FGFR1 Catalytic d 99.9 1.1E-23 2.4E-28 251.9 16.6 199 161-379 17-232 (307)
392 cd05079 PTKc_Jak1_rpt2 Catalyt 99.9 1.4E-23 3.1E-28 247.8 17.4 195 163-379 5-202 (284)
393 cd05088 PTKc_Tie2 Catalytic do 99.9 1E-23 2.2E-28 251.8 16.2 190 161-379 6-213 (303)
394 cd08224 STKc_Nek6_Nek7 Catalyt 99.9 1.7E-23 3.8E-28 243.8 17.8 191 162-379 2-196 (267)
395 PTZ00421 coronin; Provisional 99.9 1E-21 2.2E-26 246.1 34.8 226 1301-1586 35-293 (493)
396 KOG1094 Discoidin domain recep 99.9 2.6E-24 5.6E-29 254.0 10.7 209 163-402 539-748 (807)
397 cd05103 PTKc_VEGFR2 Catalytic 99.9 1E-23 2.2E-28 256.3 16.4 198 161-379 6-271 (343)
398 cd08229 STKc_Nek7 Catalytic do 99.9 7.3E-24 1.6E-28 247.4 14.3 191 162-379 2-196 (267)
399 KOG0288 WD40 repeat protein Ti 99.9 1.1E-23 2.3E-28 239.8 15.1 270 1281-1622 173-459 (459)
400 cd05113 PTKc_Btk_Bmx Catalytic 99.9 1.2E-23 2.6E-28 244.6 16.0 188 161-379 3-191 (256)
401 cd05109 PTKc_HER2 Catalytic do 99.9 1.4E-23 3.1E-28 247.0 16.8 194 161-378 6-200 (279)
402 cd05059 PTKc_Tec_like Catalyti 99.9 1.1E-23 2.4E-28 244.8 15.1 187 162-379 4-191 (256)
403 KOG1151 Tousled-like protein k 99.9 1.4E-24 3.1E-29 247.7 7.4 204 161-379 462-674 (775)
404 cd05042 PTKc_Aatyk Catalytic d 99.9 1.2E-23 2.7E-28 246.0 15.6 188 168-379 1-199 (269)
405 KOG1026 Nerve growth factor re 99.9 2.9E-24 6.2E-29 267.9 10.7 197 161-378 485-694 (774)
406 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.9 2.1E-23 4.5E-28 246.2 17.6 196 161-379 3-201 (284)
407 cd05111 PTK_HER3 Pseudokinase 99.9 1.4E-23 3.1E-28 247.3 16.1 195 161-379 6-201 (279)
408 cd07833 STKc_CDKL Catalytic do 99.9 1.8E-23 3.9E-28 246.7 16.8 199 162-394 1-200 (288)
409 cd05094 PTKc_TrkC Catalytic do 99.9 2.8E-23 6.1E-28 246.3 18.3 197 161-379 4-215 (291)
410 cd05036 PTKc_ALK_LTK Catalytic 99.9 1.4E-23 3.1E-28 246.9 15.6 200 161-379 5-211 (277)
411 cd05082 PTKc_Csk Catalytic dom 99.9 7.9E-24 1.7E-28 245.8 13.3 183 161-379 5-189 (256)
412 KOG0587 Traf2- and Nck-interac 99.9 2.4E-23 5.1E-28 257.5 17.9 200 161-397 18-230 (953)
413 cd05095 PTKc_DDR2 Catalytic do 99.9 1.9E-23 4.1E-28 248.4 16.6 203 161-384 4-226 (296)
414 cd05089 PTKc_Tie1 Catalytic do 99.9 1.3E-23 2.7E-28 250.1 15.1 191 162-379 2-208 (297)
415 cd05107 PTKc_PDGFR_beta Cataly 99.9 1.7E-23 3.7E-28 258.9 16.8 198 161-379 36-331 (401)
416 KOG0268 Sof1-like rRNA process 99.9 3E-23 6.6E-28 232.5 16.9 282 1275-1625 58-346 (433)
417 cd05034 PTKc_Src_like Catalyti 99.9 1.8E-23 3.9E-28 243.2 16.0 189 161-379 5-194 (261)
418 cd05070 PTKc_Fyn_Yrk Catalytic 99.9 1.4E-23 3E-28 244.3 15.0 188 161-379 5-193 (260)
419 cd05067 PTKc_Lck_Blk Catalytic 99.9 9.4E-24 2E-28 245.8 13.4 188 161-379 5-193 (260)
420 cd05075 PTKc_Axl Catalytic dom 99.9 1.6E-23 3.5E-28 245.1 15.5 193 164-379 1-204 (272)
421 cd05045 PTKc_RET Catalytic dom 99.9 2E-23 4.3E-28 247.3 16.4 196 163-379 1-219 (290)
422 KOG0584 Serine/threonine prote 99.9 1.5E-24 3.2E-29 261.4 6.6 191 165-393 43-240 (632)
423 KOG0983 Mitogen-activated prot 99.9 3.7E-24 8E-29 233.2 9.0 211 161-408 91-308 (391)
424 cd06653 STKc_MEKK3_like_1 Cata 99.9 3.1E-23 6.7E-28 242.1 17.5 192 162-379 2-199 (264)
425 cd05115 PTKc_Zap-70 Catalytic 99.9 1.2E-23 2.5E-28 245.0 13.8 186 169-379 2-188 (257)
426 cd05148 PTKc_Srm_Brk Catalytic 99.9 1.2E-23 2.5E-28 244.8 13.7 189 161-379 5-194 (261)
427 PF07714 Pkinase_Tyr: Protein 99.9 3.7E-23 8E-28 241.3 17.8 192 165-378 2-194 (259)
428 cd05073 PTKc_Hck Catalytic dom 99.9 1.9E-23 4.2E-28 243.3 15.4 188 161-379 5-193 (260)
429 PHA02882 putative serine/threo 99.9 3.1E-23 6.8E-28 246.5 17.3 208 161-379 11-223 (294)
430 cd05057 PTKc_EGFR_like Catalyt 99.9 4.3E-23 9.4E-28 242.9 18.3 194 161-378 6-200 (279)
431 KOG0310 Conserved WD40 repeat- 99.9 2.2E-22 4.7E-27 234.1 23.5 271 1327-1676 26-305 (487)
432 cd05099 PTKc_FGFR4 Catalytic d 99.9 3.7E-23 8E-28 248.2 17.7 199 161-379 11-226 (314)
433 cd05069 PTKc_Yes Catalytic dom 99.9 1.5E-23 3.3E-28 244.1 13.8 188 161-379 5-193 (260)
434 cd05100 PTKc_FGFR3 Catalytic d 99.9 3.3E-23 7.1E-28 250.9 17.1 198 162-379 12-226 (334)
435 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.9 3.6E-23 7.7E-28 242.3 16.6 188 168-379 1-199 (269)
436 cd05085 PTKc_Fer Catalytic dom 99.9 2E-23 4.3E-28 241.3 14.2 183 168-379 1-184 (250)
437 KOG1446 Histone H3 (Lys4) meth 99.9 5E-21 1.1E-25 213.5 32.6 276 1283-1623 14-302 (311)
438 cd05097 PTKc_DDR_like Catalyti 99.9 2E-23 4.3E-28 248.1 14.5 199 161-379 4-221 (295)
439 cd05092 PTKc_TrkA Catalytic do 99.9 4.1E-23 8.8E-28 243.5 16.7 197 161-379 4-214 (280)
440 cd05063 PTKc_EphR_A2 Catalytic 99.9 4.6E-23 1E-27 240.9 16.9 195 162-379 5-200 (268)
441 KOG0308 Conserved WD40 repeat- 99.9 5.3E-23 1.1E-27 244.6 17.2 281 1326-1677 20-324 (735)
442 KOG0289 mRNA splicing factor [ 99.9 6.2E-22 1.4E-26 226.3 25.1 277 1328-1677 220-503 (506)
443 KOG0294 WD40 repeat-containing 99.9 5E-22 1.1E-26 219.9 23.1 239 1278-1586 38-284 (362)
444 KOG0277 Peroxisomal targeting 99.9 8.7E-23 1.9E-27 219.8 16.4 223 1301-1582 76-308 (311)
445 cd05039 PTKc_Csk_like Catalyti 99.9 4.6E-23 1E-27 239.2 15.6 184 161-379 5-189 (256)
446 cd05077 PTK_Jak1_rpt1 Pseudoki 99.9 3.8E-23 8.2E-28 241.5 14.6 186 168-379 1-199 (262)
447 cd05046 PTK_CCK4 Pseudokinase 99.9 4.5E-23 9.8E-28 242.0 15.2 196 162-379 5-208 (275)
448 cd00192 PTKc Catalytic domain 99.9 5.9E-23 1.3E-27 237.8 16.0 189 168-379 1-197 (262)
449 cd06642 STKc_STK25-YSK1 Cataly 99.9 1.4E-23 3.1E-28 246.8 11.0 196 162-395 4-200 (277)
450 KOG0301 Phospholipase A2-activ 99.9 4.5E-22 9.7E-27 238.6 23.6 271 1277-1624 8-288 (745)
451 cd05050 PTKc_Musk Catalytic do 99.9 5E-23 1.1E-27 243.5 15.4 198 161-379 4-222 (288)
452 cd05040 PTKc_Ack_like Catalyti 99.9 8.1E-23 1.8E-27 237.2 16.3 189 168-379 1-190 (257)
453 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.9 4.5E-23 9.8E-28 242.6 14.2 185 169-379 2-211 (274)
454 cd05043 PTK_Ryk Pseudokinase d 99.9 5E-23 1.1E-27 242.4 14.5 197 161-379 5-209 (280)
455 cd05060 PTKc_Syk_like Catalyti 99.9 9.9E-23 2.1E-27 236.8 16.3 186 168-378 1-187 (257)
456 cd05083 PTKc_Chk Catalytic dom 99.9 6.5E-23 1.4E-27 237.8 14.7 182 161-379 5-187 (254)
457 cd05086 PTKc_Aatyk2 Catalytic 99.9 1.2E-22 2.5E-27 238.1 16.8 188 168-379 1-198 (268)
458 cd06647 STKc_PAK_I Catalytic d 99.9 1.1E-22 2.3E-27 241.8 16.7 187 161-379 18-205 (293)
459 smart00219 TyrKc Tyrosine kina 99.9 9.4E-23 2E-27 236.0 15.8 193 164-379 1-194 (258)
460 KOG0289 mRNA splicing factor [ 99.9 1E-21 2.2E-26 224.6 23.6 265 1300-1623 233-505 (506)
461 cd05038 PTKc_Jak_rpt2 Catalyti 99.9 1.5E-22 3.3E-27 238.2 17.5 205 161-394 3-210 (284)
462 KOG0640 mRNA cleavage stimulat 99.9 3.6E-22 7.8E-27 219.2 18.9 285 1276-1622 105-424 (430)
463 cd05112 PTKc_Itk Catalytic dom 99.9 1.4E-22 3.1E-27 234.9 16.8 187 162-379 4-191 (256)
464 cd05056 PTKc_FAK Catalytic dom 99.9 1.3E-22 2.9E-27 237.5 16.6 193 161-379 5-198 (270)
465 KOG0973 Histone transcription 99.9 2.1E-21 4.6E-26 244.4 28.2 284 1279-1624 8-355 (942)
466 cd05110 PTKc_HER4 Catalytic do 99.9 1.3E-22 2.7E-27 242.3 16.4 195 161-379 6-201 (303)
467 KOG0772 Uncharacterized conser 99.9 1.4E-21 2.9E-26 226.9 23.8 305 1315-1677 155-484 (641)
468 PTZ00420 coronin; Provisional 99.9 1.2E-20 2.7E-25 237.3 34.1 247 1352-1663 53-319 (568)
469 PTZ00421 coronin; Provisional 99.9 1.1E-20 2.3E-25 237.0 33.2 244 1326-1624 19-290 (493)
470 cd05041 PTKc_Fes_like Catalyti 99.9 1.6E-22 3.4E-27 233.9 15.6 184 168-379 1-185 (251)
471 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.9 5.9E-23 1.3E-27 239.1 12.0 186 168-379 1-195 (258)
472 KOG1446 Histone H3 (Lys4) meth 99.9 1.5E-20 3.2E-25 209.8 30.3 279 1320-1678 7-301 (311)
473 cd05047 PTKc_Tie Catalytic dom 99.9 1.5E-22 3.2E-27 237.4 15.3 183 168-379 1-201 (270)
474 KOG0641 WD40 repeat protein [G 99.9 2.7E-20 5.8E-25 196.4 30.3 275 1288-1623 39-348 (350)
475 cd05058 PTKc_Met_Ron Catalytic 99.9 2.5E-22 5.4E-27 233.8 16.8 190 168-379 1-192 (262)
476 KOG0301 Phospholipase A2-activ 99.9 1.6E-21 3.6E-26 233.8 23.9 270 1319-1677 6-285 (745)
477 KOG1006 Mitogen-activated prot 99.9 3.9E-24 8.4E-29 232.6 1.2 197 161-393 63-266 (361)
478 KOG0670 U4/U6-associated splic 99.9 3.6E-23 7.7E-28 241.4 9.0 204 162-397 432-642 (752)
479 cd05074 PTKc_Tyro3 Catalytic d 99.9 2.4E-22 5.2E-27 235.4 16.1 194 164-379 1-205 (273)
480 KOG1539 WD repeat protein [Gen 99.9 3.4E-20 7.5E-25 226.1 34.9 349 1286-1677 162-645 (910)
481 cd05037 PTK_Jak_rpt1 Pseudokin 99.9 1.6E-22 3.6E-27 234.5 14.4 184 168-379 1-196 (259)
482 KOG0647 mRNA export protein (c 99.9 3.7E-21 8E-26 212.0 23.6 257 1288-1613 34-311 (347)
483 KOG0647 mRNA export protein (c 99.9 4.5E-21 9.8E-26 211.3 24.3 268 1325-1668 25-311 (347)
484 KOG0199 ACK and related non-re 99.9 6.4E-23 1.4E-27 245.8 10.6 202 160-391 108-310 (1039)
485 KOG0310 Conserved WD40 repeat- 99.9 2.2E-21 4.7E-26 225.8 22.5 259 1288-1617 33-301 (487)
486 KOG1063 RNA polymerase II elon 99.9 6.6E-21 1.4E-25 228.4 26.2 334 1276-1677 184-645 (764)
487 cd05583 STKc_MSK_N N-terminal 99.9 5.8E-22 1.2E-26 234.5 15.9 192 163-379 1-198 (288)
488 cd05044 PTKc_c-ros Catalytic d 99.9 2.9E-22 6.4E-27 234.1 13.3 194 168-379 1-203 (269)
489 KOG0305 Anaphase promoting com 99.9 9.3E-21 2E-25 229.4 25.5 258 1301-1624 191-461 (484)
490 KOG1407 WD40 repeat protein [F 99.9 1.5E-20 3.2E-25 203.6 24.2 268 1279-1617 16-294 (313)
491 KOG4278 Protein tyrosine kinas 99.9 1.1E-22 2.5E-27 239.6 8.4 187 163-378 268-455 (1157)
492 KOG4257 Focal adhesion tyrosin 99.9 2.7E-22 5.9E-27 237.7 11.4 190 163-377 390-580 (974)
493 KOG0299 U3 snoRNP-associated p 99.9 1E-20 2.2E-25 218.6 24.0 280 1277-1625 136-457 (479)
494 cd06614 STKc_PAK Catalytic dom 99.9 1.2E-21 2.7E-26 231.4 15.5 188 161-379 18-206 (286)
495 KOG0299 U3 snoRNP-associated p 99.9 1.6E-20 3.4E-25 217.1 23.9 274 1320-1668 135-443 (479)
496 KOG2096 WD40 repeat protein [G 99.9 3.1E-20 6.8E-25 205.0 24.4 292 1320-1677 79-399 (420)
497 cd08528 STKc_Nek10 Catalytic d 99.9 1.9E-21 4.1E-26 227.5 15.0 198 163-394 1-211 (269)
498 cd05576 STKc_RPK118_like Catal 99.9 9.8E-22 2.1E-26 226.1 12.4 168 173-379 4-172 (237)
499 KOG0576 Mitogen-activated prot 99.9 6.9E-23 1.5E-27 245.9 2.8 190 156-376 9-202 (829)
500 KOG0641 WD40 repeat protein [G 99.9 2.9E-19 6.2E-24 188.7 29.4 294 1319-1678 25-347 (350)
No 1
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=6.5e-65 Score=580.85 Aligned_cols=580 Identities=22% Similarity=0.301 Sum_probs=420.2
Q ss_pred chhhhhhhhcccchhhHHHHhhhHHHHHhcccccCCCCCCCCcccchhhHHHHHHhhhcccccccchhHHHHHhhhhchh
Q 000316 997 IDVVVRIGGLLGETFIVRQMLPLLKHVARSSIDVSNTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVVKELIEDRSC 1076 (1678)
Q Consensus 997 ~~~l~~i~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1076 (1678)
.|||+.||++|||+||+.|||||+++||..|. +|++..+ |+|+|+.+++++++||+|+|..+| |.||++.+
T Consensus 417 ~ecLm~IaalYgenFillQ~fP~~sdLI~lc~--KRisg~L------EgaiiSs~qil~~mipclsDa~iM-ehlqhiml 487 (1034)
T KOG4190|consen 417 EECLMEIAALYGENFILLQFFPFCSDLIELCH--KRISGQL------EGAIISSFQILELMIPCLSDAQIM-EHLQHIML 487 (1034)
T ss_pred HHHHHHHHHHhcchhhhhhhhHHHHHHHHHHh--hhccccc------chhhhhHHHHHHHhccccchHHHH-HHHHHHhh
Confidence 89999999999999999999999999999999 4888855 999999999999999999999999 88887755
Q ss_pred -----hhhhhhhccccchhHHHHHHHH--------HHHHHHHhchhhHHHhhh-HHHHHHHhhhcccccccccCCCC---
Q 000316 1077 -----LHVMVLMHTNLEITVLQVAAST--------LMAICQRIGPDLTALHVL-PHLKELFDELAFSQECSDESGSL--- 1139 (1678)
Q Consensus 1077 -----~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~r~g~~~~~~~~~-~~l~~~f~~~~~~~~~~~~~~~~--- 1139 (1678)
|...+|+++|+.||+|++..+. |++|++|||.||||+|.+ |.|.+|| +.|++..+..+..-
T Consensus 488 daillpilrllsstnlvmpsgylg~~~ia~Kf~dai~ais~kiGsdmTReh~cQPllnpFf--LiFnkaf~ip~tD~acd 565 (1034)
T KOG4190|consen 488 DAILLPILRLLSSTNLVMPSGYLGEEFIAQKFCDAIHAISQKIGSDMTREHACQPLLNPFF--LIFNKAFEIPETDEACD 565 (1034)
T ss_pred hhhhhhHHHhhccccccccchHHHHHHHHHHHHHHHHHHHHHhcchhhHHHhcCccccchh--hhhhhhcCCCCcchhhh
Confidence 5555599999999999987754 899999999999999999 9999999 99998776543111
Q ss_pred CCCccCCCCCCC-cccccccc----hhhHHHHHHHHHhhhhHHHHHHHhhhhHHHHHHHHHhccCcccccCCCccccccc
Q 000316 1140 GGSLKVPKPKVD-GESQIESR----MDLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRYHNWKWEYTGESSRISEEN 1214 (1678)
Q Consensus 1140 ~~~~~~~~~~~~-~~~~~~~~----~~~~~~~y~~~~~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 1214 (1678)
-.++..-.|..+ |.++.|.+ ++||...|..|++.+|...|.+.|.+-.++ +..||+.+++...+. .
T Consensus 566 lanlsligga~qPera~eeL~dVfg~ela~~a~~~F~k~lGea~lkr~~~dl~Fl---i~~cheheqpngq~k------~ 636 (1034)
T KOG4190|consen 566 LANLSLIGGAKQPERAEEELFDVFGLELAEDAVDKFAKELGEAFLKRFCDDLAFL---IPFCHEHEQPNGQPK------A 636 (1034)
T ss_pred hcchhhcccccCchhhHHHHHhcccHHHHHHHHHHHHHHhchHHHHhhccChhhe---ehhhccccCCCCCCC------c
Confidence 122223344433 56666654 599999999999999999999999999998 899998777421111 1
Q ss_pred cccCccccCCCCccccCchhh-hhccCcccccccccccc-----ccCcccccccccccchhhhhhhccccccCCCCceEe
Q 000316 1215 ISAKRPLLNKGSTSQCNPAKL-LLNGVGWSIPQSQGSRS-----SKNLIPQRRVYDYHKSSVERQEATSNLMKCEPWFWF 1288 (1678)
Q Consensus 1215 ~da~rf~~~~~~~~~~~p~q~-y~s~l~~~~~~s~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~l~gH~~~V~~ 1288 (1678)
.-|..+-....+..-.+--.. ..+.+|- +..+.|. ....+.+..+..+++.+..+|....-+ .||+
T Consensus 637 qiA~n~~sgqdvdsvdasce~faAnSfG~---~i~GNRL~~ar~n~elisdm~a~~Ldqmp~~~hlkGn~l-----A~W~ 708 (1034)
T KOG4190|consen 637 QIAHNPPSGQDVDSVDASCEAFAANSFGG---MISGNRLFSARANSELISDMSAGGLDQMPFCDHLKGNLL-----AVWC 708 (1034)
T ss_pred ccccCCCCccccccccchhhhhhhhcccc---eeecceeeeeccCCccchhhhhcCccccccccccccchH-----HHHH
Confidence 111111111111111111011 1222221 1222222 222345667778888888877654322 2333
Q ss_pred ecCCCCCCCCCeEEEEeCCCCEEEEeCCCceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCC-------
Q 000316 1289 PTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELT------- 1361 (1678)
Q Consensus 1289 fSpdg~~~~~~~LasgS~D~~v~lWd~~~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~------- 1361 (1678)
--. ....+++.-.+++...+..+.||+..|+.++--.+++.++++|. |+||++|.++
T Consensus 709 ~et------------s~~e~dt~~ln~~~irL~nf~GH~~~iRai~AidNENSFiSASk----DKTVKLWSik~EgD~~~ 772 (1034)
T KOG4190|consen 709 AET------------SAAECDTDNLNFDHIRLCNFTGHQEKIRAIAAIDNENSFISASK----DKTVKLWSIKPEGDEIG 772 (1034)
T ss_pred hhh------------hHhhcCCcccccceeeeecccCcHHHhHHHHhcccccceeeccC----CceEEEEEeccccCccc
Confidence 100 00011122244555678899999999999999999999999998 9999999974
Q ss_pred CCeEEEEEecCCccEEEEeecCCCCcEEeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCC
Q 000316 1362 RINCVSGYYGHEEVVNDICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNT 1441 (1678)
Q Consensus 1362 tg~~l~~l~gH~~~V~sV~fs~~~~~laS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~ 1441 (1678)
|..|..+++.|+.+|+++.|..+.+.++||||.|++||..-|+.+......... +
T Consensus 773 tsaCQfTY~aHkk~i~~igfL~~lr~i~ScD~giHlWDPFigr~Laq~~dapk~-------------------------~ 827 (1034)
T KOG4190|consen 773 TSACQFTYQAHKKPIHDIGFLADLRSIASCDGGIHLWDPFIGRLLAQMEDAPKE-------------------------G 827 (1034)
T ss_pred cceeeeEhhhccCcccceeeeeccceeeeccCcceeecccccchhHhhhcCccc-------------------------C
Confidence 446889999999999999999999999999999999999888776533221100 0
Q ss_pred CCCCeEEeeecCCceeEeEeecCCCEEEE-EECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcc
Q 000316 1442 LSSGILSTAFDGNLYTCLHHIECVERLVV-GIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGA 1520 (1678)
Q Consensus 1442 ~s~~v~sv~f~~~~vt~va~sp~g~~Las-gs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~ 1520 (1678)
..+.|.++.-- +...+++ ++...||+++|.+.++.+..|+..... +-...+++++..
T Consensus 828 a~~~ikcl~nv-----------~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~-~Pna~~R~iaVa---------- 885 (1034)
T KOG4190|consen 828 AGGNIKCLENV-----------DRHILIAGCSAESTVKLFDARSCEWTCELKVCNAP-GPNALTRAIAVA---------- 885 (1034)
T ss_pred CCceeEecccC-----------cchheeeeccchhhheeeecccccceeeEEeccCC-CCchheeEEEec----------
Confidence 01111111110 1234444 478899999999999999988865433 234678888864
Q ss_pred cCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEEcCCCCEEEEEeCCCcEEE-EEcCCCCCCCCeEeecCCCC
Q 000316 1521 VASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRI-WDLRRNWPSQPTVFKGHTNG 1599 (1678)
Q Consensus 1521 ~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~svaspdg~~LaSgS~DgtI~I-WDl~~~~~~~~~~l~gH~~~ 1599 (1678)
+.|+++|+|-++|.|.+.|.|+|+.+..|+.-.-....++.|.++.|++...|.++.| |...++ ......+....+
T Consensus 886 -~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqlaapsdq~L~~saldHslaVnWhaldg--imh~q~kpppep 962 (1034)
T KOG4190|consen 886 -DKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLAAPSDQALAQSALDHSLAVNWHALDG--IMHLQDKPPPEP 962 (1034)
T ss_pred -cCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhcCchhHHHHhhcccceeEeeehhcCC--eeeeccCCCCcc
Confidence 5678999999999999999999999999998777777888888899999999999999 988776 333344544555
Q ss_pred EEEEEecCCEEEEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1600 ISGFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1600 V~afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
..-+..-|.-|+++.... ++||-=+... +.--..+|+.. ....++.++++..|-++.++.|++.|.|++.|
T Consensus 963 ahflqsvgpSLV~a~~Gn~lgVYad~a~~----ha~stitKiR~----d~f~G~lTala~LPLN~afLaGne~G~IaLlC 1034 (1034)
T KOG4190|consen 963 AHFLQSVGPSLVTAQNGNILGVYADSAEL----HAESTITKIRP----DEFPGTLTALAPLPLNCAFLAGNEHGAIALLC 1034 (1034)
T ss_pred hhhhhccCceeEEeccCcEEEEEecchhh----hhhhhhccccc----cccCCccceeeeccccchhhccCCCCceeecC
Confidence 444555677888877666 9998732111 11012234433 34778999999999999999999999999987
No 2
>cd06071 Beach BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a family of proteins conserved throughout eukaryotes. This group contains human lysosomal trafficking regulator (LYST), LPS-responsive and beige-like anchor (LRBA) and neurobeachin. Disruption of LYST leads to Chediak-Higashi syndrome, characterized by severe immunodeficiency, albinism, poor blood coagulation and neurologic problems. Neurobeachin is a candidate gene linked to autism. LBRA seems to be upregulated in several cancer types. It has been shown that the BEACH domain itself is important for the function of these proteins.
Probab=100.00 E-value=6.1e-66 Score=586.27 Aligned_cols=233 Identities=40% Similarity=0.664 Sum_probs=204.6
Q ss_pred ccccccCccchhhhHhhhccccCCCCCCCcCCcccceEe-cCCCC-CCCCCCCcCccCCcchhhhcccccchh-cc----
Q 000316 370 FNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTK-PDENFDSGSRDLSKSKWRLAKGDEQLD-FT---- 442 (1678)
Q Consensus 370 ~d~W~~G~isnfeyL~~ln~~aGRs~~dl~q~pv~pwv~-d~~~~-~~~~~~~~~rdLskp~~~l~~~~~~~~-~~---- 442 (1678)
++.|..|+||||||||.||.++||+|+|++||||||||+ ||.++ .|++++..||||+||||++++++.+.. ..
T Consensus 1 T~~W~~g~iSNfeYL~~LN~~sGRSf~D~sqYPIfPWvi~dy~s~~ldl~~~~~~RDLskpigal~~~r~~~~~~~~~~~ 80 (275)
T cd06071 1 TKKWQNGEISNFEYLMYLNTLAGRSFNDLSQYPIFPWVISDYTSEELDLNDPSTYRDLSKPIGALNKERLQLLKERYESD 80 (275)
T ss_pred CchhhcCCccHHHHHHHHHHHhCCCCCCcccCCccCeeecCCCCcccccCCcccccCCCCchhhcCHHHHHHHHHHHhhh
Confidence 478999999999999999999999999999999999999 78765 589999999999999999998766543 22
Q ss_pred cCCCCCCcccCccccCcceeeeeecccCchhHHHHHhhccc--CCCCccchHHHh----hc--CCCcccccccccCCccc
Q 000316 443 YSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVY--EPNEYPSTMQRL----YQ--WTPDECIPEFYCDPQIF 514 (1678)
Q Consensus 443 ~~~~~~~~h~~~~~~s~~~v~~y~~r~~p~~~l~~~~~~~~--~~~~~~~~~~~~----~~--~~~~EliPeff~~p~~~ 514 (1678)
....+.|+||+++|+++++|++||+|++|||.+++.+++++ .+++.+.++... .. ++++|||||||++||||
T Consensus 81 ~~~~~~~~~y~shyS~~~~V~~yLvR~ePft~~~~~lq~g~fd~~~RlF~si~~~~~~~~~~~~d~~ELIPEFf~~Pe~f 160 (275)
T cd06071 81 SDDSDPPFHYGSHYSNPAIVLYYLVRLEPFTTLHLSLQGGHFDAADRLFNSIPSSWRSASENPSDVKELIPEFYYLPEFF 160 (275)
T ss_pred cccCCCCCCCCCCCCCHHHHHHHHhHcCCccHHHHHHhcCCcCCcccchhhHHHHHHHHHccCCCcccCCchHhcCHHHH
Confidence 23456889999999999999999999999999999888764 346665555444 33 78999999999999999
Q ss_pred ccCCC---------CCCCeecCCCCCCHHHHHHHHHHhhcchHHHccCCCccccccccCCCchhhHhcCCCCCCCCCCCc
Q 000316 515 YSQHP---------GMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTK 585 (1678)
Q Consensus 515 ~~~~~---------~~~dv~lP~Wa~~~~~Fi~~~r~aLEs~~Vs~~l~~WIDlifG~kq~g~~a~~~~Nv~~~~~~~~~ 585 (1678)
+|.|. .|+||+||+||++|++||++||+||||+|||+|||+||||||||||+|++|++|+|||+|.+++..
T Consensus 161 ~N~n~~~lg~~~g~~~~DV~LP~Wa~s~~~FV~~~R~aLES~~VS~~L~~WIDLIFG~kq~G~~A~~a~Nvf~p~~Y~~~ 240 (275)
T cd06071 161 LNINKFDFGKQDGEKVNDVELPPWAKSPEEFIRKHREALESEYVSKNLHHWIDLIFGYKQRGEEAVKAKNVFHPLTYEGS 240 (275)
T ss_pred hCCCcccccccCCCcccceecCCCcCCHHHHHHHHHHHHcccHhhhhhhhhhhhhcccccCCHHHHHhcCCCcccccCCc
Confidence 99763 389999999999999999999999999999999999999999999999999999999999887531
Q ss_pred ----------------ccccC--cCcccCCCCCCC
Q 000316 586 ----------------PKSVG--RLQLFTQPHPVR 602 (1678)
Q Consensus 586 ----------------~~~~g--~~qlf~~pHp~r 602 (1678)
...+| |.|||++|||+|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~Gq~P~QLF~~pHP~R 275 (275)
T cd06071 241 VDLDSIDVEREAIEAQINNFGQTPVQLFTKPHPKR 275 (275)
T ss_pred cccchhhHHHHHHHHHHHhcCCCcchhccCCCCCC
Confidence 23355 899999999998
No 3
>PF02138 Beach: Beige/BEACH domain; InterPro: IPR000409 The BEACH domain is found in eukaryotic proteins that have diverse cellular functions ranging from lysosomal traffic to apoptosis and cytokinesisin vesicle trafficking, membrane dynamics, and receptor signaling. The name BEACH is derived from beige and Chediak-Higashi syndrome (CHS). CHS is a rare, autosomal recessive disorder that can cause severe immunodeficiency and albinism in humans and other mammals, and beige is the name for the CHS disease in mice [, ]. The BEACH domain was first described in the lysosomal-trafficking regulators Beige protein and its human homologue CHS protein Q99698 from SWISSPROT. It is also found in distantly related proteins like, for example, the FAN proteins O35242 from SWISSPROT and Q92636 from SWISSPROT which are factor associated with neutral sphingomyelinase activation []. It has also been described in Dictyostelium proteins Lvs []. The BEACH domain is usually followed by a series of WD repeats (PDOC00574 from PROSITEDOC). The function of the BEACH domain is unknown.; PDB: 1MI1_B 1T77_C.
Probab=100.00 E-value=2e-64 Score=575.30 Aligned_cols=233 Identities=41% Similarity=0.673 Sum_probs=159.7
Q ss_pred ccccccCccchhhhHhhhccccCCCCCCCcCCcccceEe-cCCCC-CCCCCCCcCccCCcchhhhcccc-cchhcccC--
Q 000316 370 FNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTK-PDENFDSGSRDLSKSKWRLAKGD-EQLDFTYS-- 444 (1678)
Q Consensus 370 ~d~W~~G~isnfeyL~~ln~~aGRs~~dl~q~pv~pwv~-d~~~~-~~~~~~~~~rdLskp~~~l~~~~-~~~~~~~~-- 444 (1678)
+++|..|+||||+|||.||.+|||+|+|++||||||||+ ||.++ .|++++..||||+||||++++.. +.++..|.
T Consensus 1 T~~W~~g~iSNfeYL~~LN~~aGRSf~D~sqYPIFPWv~~dy~s~~ldl~~~~~~RdLskPiga~~~~r~~~~~~~~~~~ 80 (270)
T PF02138_consen 1 TEKWQNGEISNFEYLMYLNILAGRSFNDLSQYPIFPWVISDYDSEELDLNDPSNYRDLSKPIGAQNEERLEKLKERYEEM 80 (270)
T ss_dssp HHHHHTTSS-HHHHHHHHHHHCT--TT-GGG---B---B---SSSS--TT-GGGB--TTS-HHHCSHHHHHHHHHHHHC-
T ss_pred CcchhcCCCcHHHHHHHHhHHhccCCCCCccCccccchhccCCccccccCCccccccccccccccCHHHHHHHHHHHHhh
Confidence 468999999999999999999999999999999999999 88765 68899999999999999886543 22333332
Q ss_pred -CCCCCcccCccccCcceeeeeecccCchhHHHHHhhccc--CCCCccchHHHhhcC------CCcccccccccCCcccc
Q 000316 445 -SSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVY--EPNEYPSTMQRLYQW------TPDECIPEFYCDPQIFY 515 (1678)
Q Consensus 445 -~~~~~~h~~~~~~s~~~v~~y~~r~~p~~~l~~~~~~~~--~~~~~~~~~~~~~~~------~~~EliPeff~~p~~~~ 515 (1678)
..+.|+||+++|+++++|++||+|++|||.+++.++++. .+++.+.++.+.+.+ +++|||||||++||||+
T Consensus 81 ~~~~~~~~y~s~ys~~~~v~~~L~R~ePft~l~~~lq~g~fD~~~r~F~SI~~~~~~~~~~~~d~~EliPEff~~Pe~f~ 160 (270)
T PF02138_consen 81 EEFEPPFHYGSHYSSPGTVLYYLVRLEPFTSLHIDLQSGKFDVPDRLFSSIEDTWNSVTENMNDVKELIPEFFYLPEFFK 160 (270)
T ss_dssp -SSS---SBSS-SS-HHHHHHHTTTSTTHHHHHHHCCTTS---CCCSS-BHHHHHHHHHH-TT----B-GGGGT-GGGGS
T ss_pred hccCCCccccCCCCCcchhhhhhcccChHHHHHHHHhccccCCchHHHHHHHHHHHHhhcCCccccccChhhhCCHHHhc
Confidence 234789999999999999999999999999999998763 688999889888754 57999999999999999
Q ss_pred cCCC-------CCCCeecCCCCCCHHHHHHHHHHhhcchHHHccCCCccccccccCCCchhhHhcCCCCCCCCCCCcc--
Q 000316 516 SQHP-------GMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKP-- 586 (1678)
Q Consensus 516 ~~~~-------~~~dv~lP~Wa~~~~~Fi~~~r~aLEs~~Vs~~l~~WIDlifG~kq~g~~a~~~~Nv~~~~~~~~~~-- 586 (1678)
|.+. .|+||+||+||++|++||++||+||||+|||++||+||||||||||+|++|++|+|||+|.+++...
T Consensus 161 N~n~~~~g~~~~~~dV~LP~Wa~s~~~FV~~~R~aLES~~VS~~L~~WIDLIFG~kq~G~~A~~a~Nvf~p~~Y~~~~~~ 240 (270)
T PF02138_consen 161 NINNFDLGKGEDVDDVELPPWAKSPFEFVYKHRKALESDYVSQNLHHWIDLIFGYKQRGKEAVEAKNVFHPLTYEDSWIE 240 (270)
T ss_dssp -TT-SS--BS-B-SS-B--TT-SSHHHHHHHHHHHHCSHHHHTTHHHHHHHHTSCCCSCHHHHHTT--B-CCCSTTS---
T ss_pred ccccccccCCCccceeecCCccchHHHHHHHHHHHHhhhHHHhhhhHHHHHhhCcccccHHHHHHhhcccccCCCccccC
Confidence 9865 6899999999999999999999999999999999999999999999999999999999999987543
Q ss_pred ------------cccC--cCcccCCCCCCC
Q 000316 587 ------------KSVG--RLQLFTQPHPVR 602 (1678)
Q Consensus 587 ------------~~~g--~~qlf~~pHp~r 602 (1678)
..+| |.|||++|||+|
T Consensus 241 ~~~~~~~~~~~~~~~Gq~P~QLF~~pHP~R 270 (270)
T PF02138_consen 241 DPMEREAIEAQLKNFGQVPIQLFTKPHPKR 270 (270)
T ss_dssp SHHHHHHHHHHHHHC--------SS-----
T ss_pred CHHHHHHHHHHHHhcCCChHHHhCCCCCCC
Confidence 4567 789999999998
No 4
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=2.4e-46 Score=500.97 Aligned_cols=293 Identities=19% Similarity=0.234 Sum_probs=223.9
Q ss_pred eccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCC----e----EEEEEecCCccEEEEeecCC-CCcEE--eC
Q 000316 1323 IRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRI----N----CVSGYYGHEEVVNDICVLSS-SGRIA--SC 1391 (1678)
Q Consensus 1323 l~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg----~----~l~~l~gH~~~V~sV~fs~~-~~~la--S~ 1391 (1678)
+.+|.+.|.+++|+|+|++++|||. |++|+|||+.+. . ....+. +...|.+++|++. +..++ +.
T Consensus 479 ~~~~~~~V~~i~fs~dg~~latgg~----D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~ 553 (793)
T PLN00181 479 LLNSSNLVCAIGFDRDGEFFATAGV----NKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNF 553 (793)
T ss_pred ccCCCCcEEEEEECCCCCEEEEEeC----CCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeC
Confidence 4569999999999999999999997 999999997542 1 223333 4568999999875 45564 44
Q ss_pred CCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeec-CCCEEEE
Q 000316 1392 DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIE-CVERLVV 1470 (1678)
Q Consensus 1392 DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp-~g~~Las 1470 (1678)
||+|++||+.+++.+..+..|. +. +++++++| ++..|++
T Consensus 554 Dg~v~lWd~~~~~~~~~~~~H~------------------------------~~----------V~~l~~~p~~~~~L~S 593 (793)
T PLN00181 554 EGVVQVWDVARSQLVTEMKEHE------------------------------KR----------VWSIDYSSADPTLLAS 593 (793)
T ss_pred CCeEEEEECCCCeEEEEecCCC------------------------------CC----------EEEEEEcCCCCCEEEE
Confidence 9999999999988877776542 23 44455553 6789999
Q ss_pred EECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCc-EEEE
Q 000316 1471 GIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN-VIAS 1549 (1678)
Q Consensus 1471 gs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~-~i~~ 1549 (1678)
|+.|++|++||++++..+..+..+ ..|.+++|.+ ++|.++++|+.||.|++||+++++ .+..
T Consensus 594 gs~Dg~v~iWd~~~~~~~~~~~~~-------~~v~~v~~~~----------~~g~~latgs~dg~I~iwD~~~~~~~~~~ 656 (793)
T PLN00181 594 GSDDGSVKLWSINQGVSIGTIKTK-------ANICCVQFPS----------ESGRSLAFGSADHKVYYYDLRNPKLPLCT 656 (793)
T ss_pred EcCCCEEEEEECCCCcEEEEEecC-------CCeEEEEEeC----------CCCCEEEEEeCCCeEEEEECCCCCccceE
Confidence 999999999999999988877642 2366777642 346899999999999999999876 5778
Q ss_pred EeccCCCeEEEEcCCCCEEEEEeCCCcEEEEEcCCCC----CCCCeEeecCCCCEE--EEEecCCEEEEEeCCC-eEEEe
Q 000316 1550 WRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNW----PSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSS 1622 (1678)
Q Consensus 1550 l~gH~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~----~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwd 1622 (1678)
+.+|...|+++...++.+|+|+|.|++|++||++.+. ...+..+.+|...+. +|++++++|++|+.|+ |.+|+
T Consensus 657 ~~~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~ 736 (793)
T PLN00181 657 MIGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYH 736 (793)
T ss_pred ecCCCCCEEEEEEeCCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEE
Confidence 8899999999995588899999999999999997531 245678999998877 5999999999999999 99999
Q ss_pred cCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1623 LSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1623 l~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
......... ................+...|++++|+|++..|++|+.||+|+||+
T Consensus 737 ~~~~~~~~s-~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~ 791 (793)
T PLN00181 737 KAFPMPVLS-YKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILE 791 (793)
T ss_pred CCCCCceEE-EecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEe
Confidence 642110000 0000000000000123567899999999999999999999999996
No 5
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=6e-48 Score=418.52 Aligned_cols=149 Identities=23% Similarity=0.318 Sum_probs=137.0
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|..+++||+|+||+||+|++. ++|+.||||+++..+..+. +.++++|||+.|++++||||+.|+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~------~t~~~VAIKKIkl~~~kdG--------i~~talREIK~Lqel~h~nIi~Li 67 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDT------ETGKRVAIKKIKLGNAKDG--------INRTALREIKLLQELKHPNIIELI 67 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEec------CCCcEEEEEEeeccccccC--------ccHHHHHHHHHHHHccCcchhhhh
Confidence 57999999999999999999975 6899999999987644432 234566999999999999999999
Q ss_pred eEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 242 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++|...+.+.||+||++.||+.+|+ ++...++..+++.|+.|+++||+|||+++|+||||||.|+||+++| .+||+|
T Consensus 68 D~F~~~~~l~lVfEfm~tdLe~vIk-d~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g--~lKiAD 144 (318)
T KOG0659|consen 68 DVFPHKSNLSLVFEFMPTDLEVVIK-DKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDG--QLKIAD 144 (318)
T ss_pred hhccCCCceEEEEEeccccHHHHhc-ccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCC--cEEeec
Confidence 9999999999999999999999999 5678899999999999999999999999999999999999999999 999999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+||.
T Consensus 145 FGLAr~ 150 (318)
T KOG0659|consen 145 FGLARF 150 (318)
T ss_pred ccchhc
Confidence 999995
No 6
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.4e-45 Score=411.70 Aligned_cols=331 Identities=17% Similarity=0.283 Sum_probs=284.3
Q ss_pred cccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCC
Q 000316 1276 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFK 1352 (1678)
Q Consensus 1276 ~~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~D 1352 (1678)
+++..||.+.|.+ |||+|.. |+|||+|.++|+||+. .....+.+||.+.|.||+|+|||+.||||+. |
T Consensus 108 ssS~~GH~e~Vl~~~fsp~g~~-----l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~----d 178 (480)
T KOG0271|consen 108 SSSIAGHGEAVLSVQFSPTGSR-----LVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSK----D 178 (480)
T ss_pred ccccCCCCCcEEEEEecCCCce-----EEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhcccc----C
Confidence 5678899999987 9999997 9999999999999998 6789999999999999999999999999998 8
Q ss_pred CeEEEEeCCCCeEE-EEEecCCccEEEEeecC-----CCCcEEeC--CCcEEEEECCCCceeEEecccCccccccCCCCC
Q 000316 1353 GTVQKWELTRINCV-SGYYGHEEVVNDICVLS-----SSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSS 1424 (1678)
Q Consensus 1353 gtVrlWDl~tg~~l-~~l~gH~~~V~sV~fs~-----~~~~laS~--DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~ 1424 (1678)
|+|++||.++|+++ ..+.||...|++++|.| ..+++||+ ||+|+|||+..++++..+.+|.
T Consensus 179 g~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT----------- 247 (480)
T KOG0271|consen 179 GSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHT----------- 247 (480)
T ss_pred CeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCc-----------
Confidence 99999999999876 57999999999999964 45667665 9999999999999998887663
Q ss_pred CccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcc
Q 000316 1425 SISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLV 1504 (1678)
Q Consensus 1425 ~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V 1504 (1678)
..|.++.|.+ ..++++||.|++||+|+..+|.+.+++++|. .+|
T Consensus 248 -------------------~~VTCvrwGG-----------~gliySgS~DrtIkvw~a~dG~~~r~lkGHa------hwv 291 (480)
T KOG0271|consen 248 -------------------ASVTCVRWGG-----------EGLIYSGSQDRTIKVWRALDGKLCRELKGHA------HWV 291 (480)
T ss_pred -------------------cceEEEEEcC-----------CceEEecCCCceEEEEEccchhHHHhhcccc------hhe
Confidence 3345555543 3589999999999999999999999999754 457
Q ss_pred eEEEeeCCCc-----cccCcccC--------------------CCCEEEEEecCCeEEEEeCCCC-cEEEEEeccCCCeE
Q 000316 1505 SAICACGSEK-----MQAGGAVA--------------------SPSWIAAGLSSGQCRLFDVRSG-NVIASWRAHDGYVT 1558 (1678)
Q Consensus 1505 ~sva~~~~~~-----~s~dg~~p--------------------~g~~LasGs~Dg~I~lWD~~tg-~~i~~l~gH~~~V~ 1558 (1678)
+.++.+.... |.+.+..+ .|..+++||+|+++.+|+.... +++....||..-|+
T Consensus 292 N~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn 371 (480)
T KOG0271|consen 292 NHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVN 371 (480)
T ss_pred eeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhhee
Confidence 7777663322 22323221 2457999999999999998754 58888999999999
Q ss_pred EEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE--EEEecCCEEEEEeCCC-eEEEecCCCCCCCCcce
Q 000316 1559 KLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKSADEDGQHR 1634 (1678)
Q Consensus 1559 sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~ 1634 (1678)
.|. +||++++||+|.|++|++||.++| +.+.+|+||.+.|+ +||.|.++|+|||.|. +++|++.
T Consensus 372 ~V~fSPd~r~IASaSFDkSVkLW~g~tG--k~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~---------- 439 (480)
T KOG0271|consen 372 HVSFSPDGRYIASASFDKSVKLWDGRTG--KFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVR---------- 439 (480)
T ss_pred eEEECCCccEEEEeecccceeeeeCCCc--chhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEee----------
Confidence 999 999999999999999999999999 77889999999999 6999999999999999 9999975
Q ss_pred eccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1635 LVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1635 ~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
..++..... +|...|.+++|+|||..+++|+.|..+++|-
T Consensus 440 --tkKl~~DLp--Gh~DEVf~vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 440 --TKKLKQDLP--GHADEVFAVDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred --eeeecccCC--CCCceEEEEEecCCCceeecCCCceEEEeec
Confidence 234444444 4899999999999999999999999999993
No 7
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=8e-46 Score=412.04 Aligned_cols=158 Identities=23% Similarity=0.198 Sum_probs=143.2
Q ss_pred ccccccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCC
Q 000316 155 FSCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH 234 (1678)
Q Consensus 155 ~~~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~H 234 (1678)
+..++.++.|+++.+|++|+||+||+|+++ .++.+||+|+++..+... -++++++|||.+|.+++|
T Consensus 69 l~gCrsv~efe~lnrI~EGtyGiVYRakdk------~t~eIVALKr~kmekek~--------GFPItsLREIniLl~~~H 134 (419)
T KOG0663|consen 69 LGGCRSVEEFEKLNRIEEGTYGVVYRAKDK------KTDEIVALKRLKMEKEKE--------GFPITSLREINILLKARH 134 (419)
T ss_pred ccCcccHHHHHHHhhcccCcceeEEEeccC------CcceeEEeeecccccccC--------CCcchhHHHHHHHHhcCC
Confidence 667888999999999999999999999976 688999999998765332 267788999999999999
Q ss_pred CcccceeeEEEeC--CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCC
Q 000316 235 PNVAPVLGLLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1678)
Q Consensus 235 pNIV~l~~~~~~~--~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 312 (1678)
||||.+.++.... +.+|||||||+.||..++... ..+|...+++.++.|+++||+|||.++|+||||||+|+|++..
T Consensus 135 ~NIV~vkEVVvG~~~d~iy~VMe~~EhDLksl~d~m-~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~ 213 (419)
T KOG0663|consen 135 PNIVEVKEVVVGSNMDKIYIVMEYVEHDLKSLMETM-KQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHK 213 (419)
T ss_pred CCeeeeEEEEeccccceeeeeHHHHHhhHHHHHHhc-cCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccC
Confidence 9999999998765 479999999999999999964 4679999999999999999999999999999999999999999
Q ss_pred CceeEEEEecCCcccCC
Q 000316 313 CWSWLYICDKPLVGFNS 329 (1678)
Q Consensus 313 g~~~lKL~DFGlA~~~~ 329 (1678)
| .+||||||+||...
T Consensus 214 G--~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 214 G--ILKIADFGLAREYG 228 (419)
T ss_pred C--cEEecccchhhhhc
Confidence 9 89999999999544
No 8
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-44 Score=421.97 Aligned_cols=156 Identities=24% Similarity=0.290 Sum_probs=138.7
Q ss_pred ccccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCc
Q 000316 157 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 236 (1678)
Q Consensus 157 ~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpN 236 (1678)
..+..+.|+.+++||+|+||.||+|++. .+|++||+|++..+.....- .+.++|||.||++|+|||
T Consensus 112 ~~r~~~~feki~kIGeGTyg~VYkAr~~------~tgkivALKKvr~d~~~~~~--------~~t~~REI~ILr~l~HpN 177 (560)
T KOG0600|consen 112 GPRRADSFEKIEKIGEGTYGQVYKARDL------ETGKIVALKKVRFDNEKEGF--------PITAIREIKILRRLDHPN 177 (560)
T ss_pred cccchHHHHHHHHhcCcchhheeEeeec------ccCcEEEEEEeecccCCCcc--------hHHHHHHHHHHHhcCCCc
Confidence 3445678999999999999999999965 78999999999876544332 234459999999999999
Q ss_pred ccceeeEEEeC--CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 237 VAPVLGLLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 237 IV~l~~~~~~~--~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
||+|.+...+. ..+|||+|||+.||..++. ++...|++.+++.||+||+.||+|||++||+|||||.+|||||.+|
T Consensus 178 IikL~eivt~~~~~siYlVFeYMdhDL~GLl~-~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G- 255 (560)
T KOG0600|consen 178 IIKLEEIVTSKLSGSIYLVFEYMDHDLSGLLS-SPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNG- 255 (560)
T ss_pred ccceeeEEEecCCceEEEEEecccchhhhhhc-CCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCC-
Confidence 99999998876 6899999999999999998 4667899999999999999999999999999999999999999999
Q ss_pred eeEEEEecCCcccCC
Q 000316 315 SWLYICDKPLVGFNS 329 (1678)
Q Consensus 315 ~~lKL~DFGlA~~~~ 329 (1678)
.+||+|||||++..
T Consensus 256 -~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 256 -VLKIADFGLARFYT 269 (560)
T ss_pred -CEEeccccceeecc
Confidence 99999999999654
No 9
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.1e-44 Score=398.17 Aligned_cols=152 Identities=21% Similarity=0.305 Sum_probs=134.6
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
+++|+.+.++|+|+||+||+|+++ .+|++||||++...... ...++. |+|||++|++++|||+|.|
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk------~TgqIVAIKkF~Esedd-~~VkKI-------AlREIrmLKqLkH~NLVnL 66 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNK------DTGQIVAIKKFVESEDD-PVVKKI-------ALREIRMLKQLKHENLVNL 66 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccC------CcccEEEEEeeccCCcc-HHHHHH-------HHHHHHHHHhcccchHHHH
Confidence 468999999999999999999976 78999999999764332 333333 3599999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++|.....+++|+|||+.++.+.+...+++ +++..++.|++|++.|+.|||+++|||||||||||||+.+| .+|||
T Consensus 67 iEVFrrkrklhLVFE~~dhTvL~eLe~~p~G-~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~g--vvKLC 143 (396)
T KOG0593|consen 67 IEVFRRKRKLHLVFEYCDHTVLHELERYPNG-VPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNG--VVKLC 143 (396)
T ss_pred HHHHHhcceeEEEeeecchHHHHHHHhccCC-CCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCC--cEEec
Confidence 9999999999999999999888888765554 78999999999999999999999999999999999999999 99999
Q ss_pred ecCCcccCC
Q 000316 321 DKPLVGFNS 329 (1678)
Q Consensus 321 DFGlA~~~~ 329 (1678)
|||+||...
T Consensus 144 DFGFAR~L~ 152 (396)
T KOG0593|consen 144 DFGFARTLS 152 (396)
T ss_pred cchhhHhhc
Confidence 999999543
No 10
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.2e-44 Score=406.29 Aligned_cols=178 Identities=20% Similarity=0.223 Sum_probs=149.7
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHH--HHHHHhcCCCchhHHHhhccCCCCcc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES--KNFLRLIGVPSFDESSVPGCLRHPNV 237 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~--~~~l~~~~~~~~~Ei~iL~~l~HpNI 237 (1678)
..+.|.+.+.||+|+||.|-+|..+ .+|+.||||++.+.+...... .... ...+|+++|++|+||||
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~------~tgk~vAiKIi~krk~~~~s~~~~~~~-----~v~~EieILkkL~HP~I 238 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEK------KTGKQVAIKIINKRKSTGCSRAIAKTR-----DVQNEIEILKKLSHPNI 238 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEc------ccCcEEEeeeeehhhcccccccccchh-----hhHHHHHHHHhcCCCCE
Confidence 4667999999999999999999975 689999999999876554221 1111 12399999999999999
Q ss_pred cceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC-ce
Q 000316 238 APVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC-WS 315 (1678)
Q Consensus 238 V~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g-~~ 315 (1678)
|+++++|...+..||||||++| +|.+.+- .++.+.+...+.+++|++.||.|||++||+||||||+|||++.+. ..
T Consensus 239 V~~~d~f~~~ds~YmVlE~v~GGeLfd~vv--~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~ 316 (475)
T KOG0615|consen 239 VRIKDFFEVPDSSYMVLEYVEGGELFDKVV--ANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDC 316 (475)
T ss_pred EEEeeeeecCCceEEEEEEecCccHHHHHH--hccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcce
Confidence 9999999999999999999995 9999998 577889999999999999999999999999999999999998772 13
Q ss_pred eEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 316 ~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
.+||+|||+|+.... ..-.++-| |||.|.|||++.
T Consensus 317 llKItDFGlAK~~g~------~sfm~TlC------GTpsYvAPEVl~ 351 (475)
T KOG0615|consen 317 LLKITDFGLAKVSGE------GSFMKTLC------GTPSYVAPEVLA 351 (475)
T ss_pred EEEecccchhhcccc------ceehhhhc------CCccccChhhee
Confidence 899999999997542 12223334 899999999974
No 11
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-44 Score=412.39 Aligned_cols=175 Identities=21% Similarity=0.238 Sum_probs=149.6
Q ss_pred ccccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-CC
Q 000316 157 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HP 235 (1678)
Q Consensus 157 ~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-Hp 235 (1678)
....+++|.++++||.|+||.||+|+.. +++..||||.+++.-.. ..+.++ +||++.|++|+ ||
T Consensus 5 ~~~~m~RY~~i~klGDGTfGsV~la~~~------~~~~~VAIK~MK~Kf~s---~ee~~n------LREvksL~kln~hp 69 (538)
T KOG0661|consen 5 QVIFMDRYTVIRKLGDGTFGSVYLAKSK------ETGELVAIKKMKKKFYS---WEECMN------LREVKSLRKLNPHP 69 (538)
T ss_pred ehhHHHHHHHHHHhcCCcceeEEEeeec------CCCceeeHHHHHhhhcc---HHHHHH------HHHHHHHHhcCCCC
Confidence 3445789999999999999999999954 67888999999875433 233433 39999999998 99
Q ss_pred cccceeeEEEeCC-eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 236 NVAPVLGLLKTSG-LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 236 NIV~l~~~~~~~~-~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
|||+|.+++.+.+ .+|+|||||+.+|+++++. ++..|++..++.|++||++||+|+|++|+.||||||||||+..+.
T Consensus 70 niikL~Evi~d~~~~L~fVfE~Md~NLYqLmK~-R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~- 147 (538)
T KOG0661|consen 70 NIIKLKEVIRDNDRILYFVFEFMDCNLYQLMKD-RNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGND- 147 (538)
T ss_pred cchhhHHHhhccCceEeeeHHhhhhhHHHHHhh-cCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccc-
Confidence 9999999999988 9999999999999999995 488899999999999999999999999999999999999999766
Q ss_pred eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccc
Q 000316 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 315 ~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 361 (1678)
.|||+|||+||..... .+ -+.+++|.+|+|||++
T Consensus 148 -~iKiaDFGLARev~Sk-------pP-----YTeYVSTRWYRAPEvL 181 (538)
T KOG0661|consen 148 -VIKIADFGLAREVRSK-------PP-----YTEYVSTRWYRAPEVL 181 (538)
T ss_pred -eeEecccccccccccC-------CC-----cchhhhcccccchHHh
Confidence 7999999999965421 11 1345677888888775
No 12
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-42 Score=394.12 Aligned_cols=175 Identities=21% Similarity=0.319 Sum_probs=141.4
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
....|..++.||+|+||.|..|.++ .+|..||||++...-......++ ++||+++|+.++|+|||.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~------~t~~~VAIKKi~~~F~~~~~akR--------tlRElklLr~~~HeNIi~ 85 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDK------RTGEKVAIKKILNPFENQIDAKR--------TLRELKLLRHLRHENIIG 85 (359)
T ss_pred ccceecccccccCcceeeEEEEEEc------CCCCEeehhhhhhhhhchHHHHH--------HHHHHHHHHHhcCCCcce
Confidence 3456777999999999999999976 57899999998632222222233 349999999999999999
Q ss_pred eeeEEEe-----CCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 240 VLGLLKT-----SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 240 l~~~~~~-----~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
+++++.. -..+|+|+|+|+.||.++|+ .+..+++.+++++++||++||.|+|+.+|+||||||.|+|++.+.
T Consensus 86 l~di~~p~~~~~f~DvYiV~elMetDL~~iik--~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c- 162 (359)
T KOG0660|consen 86 LLDIFRPPSRDKFNDVYLVFELMETDLHQIIK--SQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADC- 162 (359)
T ss_pred EEeecccccccccceeEEehhHHhhHHHHHHH--cCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCC-
Confidence 9999976 23799999999999999999 455699999999999999999999999999999999999999999
Q ss_pred eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccc
Q 000316 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 315 ~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 361 (1678)
.+||||||+||..... ......+.++.|.+|+|||++
T Consensus 163 -~lKI~DFGLAR~~~~~---------~~~~~mTeYVaTRWYRAPEll 199 (359)
T KOG0660|consen 163 -DLKICDFGLARYLDKF---------FEDGFMTEYVATRWYRAPELL 199 (359)
T ss_pred -CEEeccccceeecccc---------CcccchhcceeeeeecCHHHH
Confidence 8999999999965421 001123445556666666653
No 13
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-42 Score=390.64 Aligned_cols=174 Identities=19% Similarity=0.223 Sum_probs=154.1
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||+|+||+||+++.+ .+++++|+|++++.+.......+... +|..||..++||+||++
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~------dt~kiYAmKvl~K~~iv~~~e~~~~~-------~Er~IL~~v~hPFiv~l 90 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKK------DTGKIYAMKVLKKKKIVEKKEVRHTK-------AERNILSKIKHPFIVKL 90 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEc------ccCceeehhhhhhhHhhhhhhHHHHH-------HHHHHHHhCCCCcEeee
Confidence 678999999999999999999964 68999999999998877765555553 99999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
+..|++.+.+|+|+||+.| +|...|+ +.+.++|..+++|+.+|+.||.|||++||||||||||||||+.+| +++|
T Consensus 91 ~ysFQt~~kLylVld~~~GGeLf~hL~--~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~G--Hi~L 166 (357)
T KOG0598|consen 91 IYSFQTEEKLYLVLDYLNGGELFYHLQ--REGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQG--HIKL 166 (357)
T ss_pred EEecccCCeEEEEEeccCCccHHHHHH--hcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCC--cEEE
Confidence 9999999999999999995 9999998 688899999999999999999999999999999999999999999 9999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
+|||+|+...... ....+-| ||+.|||||++.
T Consensus 167 tDFgL~k~~~~~~-----~~t~tfc------GT~eYmAPEil~ 198 (357)
T KOG0598|consen 167 TDFGLCKEDLKDG-----DATRTFC------GTPEYMAPEILL 198 (357)
T ss_pred eccccchhcccCC-----Ccccccc------CCccccChHHHh
Confidence 9999999654221 1122223 899999999864
No 14
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-41 Score=407.96 Aligned_cols=173 Identities=18% Similarity=0.239 Sum_probs=153.4
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
.+|+..+.||+|+|+.||++++. .+|..||+|++.+........++-+. +||+|.+.|+|||||+++
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~------~tge~~A~KvVpk~~l~k~~~reKv~-------~EIeIHr~L~HpnIV~f~ 84 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDL------DTGEVVAVKVVPKKLLKKPKQREKVL-------NEIEIHRSLKHPNIVQFY 84 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEc------CCCcEEEEEEeehHHhcCcchHHHHH-------HHHHHHHhcCCCcEEeee
Confidence 67999999999999999999964 68999999999886665555555554 999999999999999999
Q ss_pred eEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
++|++.+++|||+|+|+ ++|..+++ +++.++|.+++++++||+.||.|||+++|||||||..||+++++. +|||+
T Consensus 85 ~~FEDs~nVYivLELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~--~VKIg 160 (592)
T KOG0575|consen 85 HFFEDSNNVYIVLELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENM--NVKIG 160 (592)
T ss_pred eEeecCCceEEEEEecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcC--cEEec
Confidence 99999999999999999 69999998 678899999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
|||||....... ...++-| |||-|.|||++.
T Consensus 161 DFGLAt~le~~~-----Erk~TlC------GTPNYIAPEVl~ 191 (592)
T KOG0575|consen 161 DFGLATQLEYDG-----ERKKTLC------GTPNYIAPEVLN 191 (592)
T ss_pred ccceeeeecCcc-----cccceec------CCCcccChhHhc
Confidence 999999766332 2233444 899999999863
No 15
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=6.5e-40 Score=366.47 Aligned_cols=290 Identities=23% Similarity=0.314 Sum_probs=253.2
Q ss_pred CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcEEeC--CCc
Q 000316 1317 ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGT 1394 (1678)
Q Consensus 1317 ~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~laS~--Dgt 1394 (1678)
..|-.++.||.++|.|++|+|+|..|+|||. |.|||+||+.|..+..+.+||...|.||+|+||+..+||+ ||+
T Consensus 105 trCssS~~GH~e~Vl~~~fsp~g~~l~tGsG----D~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~ 180 (480)
T KOG0271|consen 105 TRCSSSIAGHGEAVLSVQFSPTGSRLVTGSG----DTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGS 180 (480)
T ss_pred ceeccccCCCCCcEEEEEecCCCceEEecCC----CceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCe
Confidence 4577889999999999999999999999997 9999999999999999999999999999999999999776 999
Q ss_pred EEEEECCCCceeE-EecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEEC
Q 000316 1395 LHVWNSQTGKLLS-VFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIG 1473 (1678)
Q Consensus 1395 VrIWD~~tg~~~~-~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~ 1473 (1678)
|++||.++|+++. .+. +|..+|.+++|.|- ...|..+.+++++.
T Consensus 181 I~lwdpktg~~~g~~l~------------------------------gH~K~It~Lawep~-----hl~p~~r~las~sk 225 (480)
T KOG0271|consen 181 IRLWDPKTGQQIGRALR------------------------------GHKKWITALAWEPL-----HLVPPCRRLASSSK 225 (480)
T ss_pred EEEecCCCCCccccccc------------------------------CcccceeEEeeccc-----ccCCCccceecccC
Confidence 9999999998753 233 45678889999874 34567789999999
Q ss_pred CCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEecc
Q 000316 1474 NGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAH 1553 (1678)
Q Consensus 1474 DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH 1553 (1678)
||+|+|||+..+.++..+.+|+ ..|+||++.+. .++++||.|++|++|+...|.++..++||
T Consensus 226 Dg~vrIWd~~~~~~~~~lsgHT------~~VTCvrwGG~------------gliySgS~DrtIkvw~a~dG~~~r~lkGH 287 (480)
T KOG0271|consen 226 DGSVRIWDTKLGTCVRTLSGHT------ASVTCVRWGGE------------GLIYSGSQDRTIKVWRALDGKLCRELKGH 287 (480)
T ss_pred CCCEEEEEccCceEEEEeccCc------cceEEEEEcCC------------ceEEecCCCceEEEEEccchhHHHhhccc
Confidence 9999999999999999998654 45899998642 48999999999999999999999999999
Q ss_pred CCCeEEEE-cC-----------CC-------------------------CEEEEEeCCCcEEEEEcCCCCCCCCeEeecC
Q 000316 1554 DGYVTKLA-AP-----------ED-------------------------HLLVSSSLDKTLRIWDLRRNWPSQPTVFKGH 1596 (1678)
Q Consensus 1554 ~~~V~sva-sp-----------dg-------------------------~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH 1596 (1678)
..+|+.++ +. .+ ..|+|||.|.++.+|+....+ +++..+.||
T Consensus 288 ahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~k-kpi~rmtgH 366 (480)
T KOG0271|consen 288 AHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSK-KPITRMTGH 366 (480)
T ss_pred chheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccc-cchhhhhch
Confidence 99999998 51 12 359999999999999987763 566788999
Q ss_pred CCCEE--EEEecCCEEEEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCc
Q 000316 1597 TNGIS--GFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGY 1673 (1678)
Q Consensus 1597 ~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~ 1673 (1678)
..-|+ .||||++++||+|-|+ |++|+.. .|+. ....+ +|.+.|+.|+|+.|.|+|++||.|.+
T Consensus 367 q~lVn~V~fSPd~r~IASaSFDkSVkLW~g~-----tGk~-------lasfR--GHv~~VYqvawsaDsRLlVS~SkDsT 432 (480)
T KOG0271|consen 367 QALVNHVSFSPDGRYIASASFDKSVKLWDGR-----TGKF-------LASFR--GHVAAVYQVAWSADSRLLVSGSKDST 432 (480)
T ss_pred hhheeeEEECCCccEEEEeecccceeeeeCC-----Ccch-------hhhhh--hccceeEEEEeccCccEEEEcCCCce
Confidence 99999 5999999999999999 9999953 3332 22223 49999999999999999999999999
Q ss_pred EEEcC
Q 000316 1674 LRLCC 1678 (1678)
Q Consensus 1674 IrIwd 1678 (1678)
+++|+
T Consensus 433 LKvw~ 437 (480)
T KOG0271|consen 433 LKVWD 437 (480)
T ss_pred EEEEE
Confidence 99996
No 16
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.4e-40 Score=376.59 Aligned_cols=146 Identities=25% Similarity=0.370 Sum_probs=128.0
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
.|+-.+.+|.|+||.||+|... ++...||||++..++.... +|+++|+.++|||||+|..
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~------e~~~~vAIKKv~~d~r~kn--------------rEl~im~~l~HpNIV~L~~ 84 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLR------ETEEEVAIKKVLQDKRYKN--------------RELQIMRKLDHPNIVRLLY 84 (364)
T ss_pred EEEeeEEEeecccceEEEEEEc------CCCceeEEEEecCCCCcCc--------------HHHHHHHhcCCcCeeeEEE
Confidence 5889999999999999999954 5688999999987655433 8999999999999999999
Q ss_pred EEEeCC-----eEEEeccCCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCce
Q 000316 243 LLKTSG-----LITSVIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1678)
Q Consensus 243 ~~~~~~-----~~~lVmEy~~g~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~ 315 (1678)
+|.... .+.+||||||.+|.++++. ..+..++.-+++.|++||++||.|||+.||+||||||+|||+|.+. +
T Consensus 85 ~f~~~~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~t-g 163 (364)
T KOG0658|consen 85 FFSSSTESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDT-G 163 (364)
T ss_pred EEEecCCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCC-C
Confidence 987432 5679999999999999984 2356789999999999999999999999999999999999999884 2
Q ss_pred eEEEEecCCcccCC
Q 000316 316 WLYICDKPLVGFNS 329 (1678)
Q Consensus 316 ~lKL~DFGlA~~~~ 329 (1678)
.+||||||.|+...
T Consensus 164 ~LKicDFGSAK~L~ 177 (364)
T KOG0658|consen 164 VLKICDFGSAKVLV 177 (364)
T ss_pred eEEeccCCcceeec
Confidence 99999999999644
No 17
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.9e-40 Score=376.53 Aligned_cols=152 Identities=22% Similarity=0.246 Sum_probs=135.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCc-ccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN-VAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpN-IV~ 239 (1678)
+..|+.+++||+|+||+||+|+++ .+|..||+|+++.....+. .+.+++||+.+|+.|+|+| ||+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~------~~g~~VALKkirl~~~~EG--------~P~taiREisllk~L~~~~~iv~ 75 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSK------RTGKFVALKKIRLEFEEEG--------VPSTAIREISLLKRLSHANHIVR 75 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEe------cCCCEEEEEEEeccccccC--------CCchhhHHHHHHHHhCCCcceEE
Confidence 567999999999999999999976 5789999999987543311 3556789999999999999 999
Q ss_pred eeeEEEeCC------eEEEeccCCCCCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecC
Q 000316 240 VLGLLKTSG------LITSVIPKTPYTLENILQFSPN--ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1678)
Q Consensus 240 l~~~~~~~~------~~~lVmEy~~g~L~~~l~~~~~--~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~ 311 (1678)
|++++.+.+ .+++||||++.+|..++...+. ..++...++.+++||+.||+|||++||+||||||+||||++
T Consensus 76 L~dv~~~~~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~ 155 (323)
T KOG0594|consen 76 LHDVIHTSNNHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISS 155 (323)
T ss_pred EEeeeeecccccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECC
Confidence 999999887 8999999999999999996443 35788899999999999999999999999999999999999
Q ss_pred CCceeEEEEecCCcccC
Q 000316 312 SCWSWLYICDKPLVGFN 328 (1678)
Q Consensus 312 ~g~~~lKL~DFGlA~~~ 328 (1678)
+| .+||+|||+|+..
T Consensus 156 ~G--~lKlaDFGlAra~ 170 (323)
T KOG0594|consen 156 SG--VLKLADFGLARAF 170 (323)
T ss_pred CC--cEeeeccchHHHh
Confidence 99 9999999999943
No 18
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.1e-39 Score=384.77 Aligned_cols=151 Identities=16% Similarity=0.221 Sum_probs=140.5
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++++.||+|+||+||+|+.+ .+|.++|+|++++......+..+.++ .|..+|...++|+||+
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk------~Tg~iyAmK~LkKS~M~~~~Qv~hV~-------aERdiL~~~ds~~vVK 205 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKK------DTGEIYAMKILKKSEMLKKNQVEHVR-------AERDILAEVDSPWVVK 205 (550)
T ss_pred CcccchhheeeccccceeEEEEEEc------cCCcEEeeecccHHHHHhhhhHHHHH-------HHHHHhhhcCCCcEEE
Confidence 4789999999999999999999954 68999999999987766666666665 9999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
||..|++.+++||||||++| |+..+|. +.+.+++..+++|+.+++.|++.+|+.|+|||||||+|+|||..| ++|
T Consensus 206 LyYsFQD~~~LYLiMEylPGGD~mTLL~--~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~G--HiK 281 (550)
T KOG0605|consen 206 LYYSFQDKEYLYLIMEYLPGGDMMTLLM--RKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKG--HIK 281 (550)
T ss_pred EEEEecCCCeeEEEEEecCCccHHHHHH--hcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCC--CEe
Confidence 99999999999999999995 9999998 678899999999999999999999999999999999999999999 999
Q ss_pred EEecCCccc
Q 000316 319 ICDKPLVGF 327 (1678)
Q Consensus 319 L~DFGlA~~ 327 (1678)
|+||||++-
T Consensus 282 LSDFGLs~g 290 (550)
T KOG0605|consen 282 LSDFGLSTG 290 (550)
T ss_pred eccccccch
Confidence 999999964
No 19
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-39 Score=332.50 Aligned_cols=149 Identities=21% Similarity=0.223 Sum_probs=134.5
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
.+|...++||+|+||+||+|+++ .++++||+|.++.+...+. ++.+++|||.+|++++|.|||+++
T Consensus 2 ~~ydkmekigegtygtvfkarn~------~t~eivalkrvrlddddeg--------vpssalreicllkelkhknivrl~ 67 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNR------ETHEIVALKRVRLDDDDEG--------VPSSALREICLLKELKHKNIVRLH 67 (292)
T ss_pred cchHHHHhhcCCcceeeEecccC------CccceEEEEEEeccCCCCC--------CcHHHHHHHHHHHHhhhcceeehh
Confidence 46888999999999999999964 6899999999987644432 223356999999999999999999
Q ss_pred eEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 242 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++...+..+.+|+|||..+|..+.. +-++.+..+.++.++.|+++||.|||+++++||||||.|+||+.+| .+|++|
T Consensus 68 dvlhsdkkltlvfe~cdqdlkkyfd-slng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ng--elklad 144 (292)
T KOG0662|consen 68 DVLHSDKKLTLVFEFCDQDLKKYFD-SLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNG--ELKLAD 144 (292)
T ss_pred hhhccCceeEEeHHHhhHHHHHHHH-hcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCC--cEEecc
Confidence 9999999999999999999999998 4577789999999999999999999999999999999999999999 999999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+||.
T Consensus 145 fglara 150 (292)
T KOG0662|consen 145 FGLARA 150 (292)
T ss_pred cchhhh
Confidence 999984
No 20
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-39 Score=365.03 Aligned_cols=184 Identities=17% Similarity=0.242 Sum_probs=154.1
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+.+.++.||+|+.|+||+|+|+ .+++++|+|.+..+ ......++.+ +|++++++++|||||++
T Consensus 78 ~~dle~~~~lG~G~gG~V~kv~Hk------~t~~i~AlK~I~~~-~~~~~~~Qi~--------rEl~il~~~~spyIV~~ 142 (364)
T KOG0581|consen 78 LSDLERLGVLGSGNGGTVYKVRHK------PTGKIYALKVILLN-IDPALQKQIL--------RELEILRSCQSPYIVGF 142 (364)
T ss_pred HHHhhhhhhcccCCCcEEEEEEEc------CCCeEEEEEeeccc-CCHHHHHHHH--------HHHHHHhhCCCCCeeeE
Confidence 557889999999999999999986 68999999999543 3444445555 99999999999999999
Q ss_pred eeEEEeCC-eEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCCeEecCCCceeE
Q 000316 241 LGLLKTSG-LITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 241 ~~~~~~~~-~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
|++|..+. .++|+||||+ |+|+++++ ..+.++|.....++.+|++||.|||+ ++||||||||+|||++..| .|
T Consensus 143 ygaF~~~~~~isI~mEYMDgGSLd~~~k--~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskG--eV 218 (364)
T KOG0581|consen 143 YGAFYSNGEEISICMEYMDGGSLDDILK--RVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKG--EV 218 (364)
T ss_pred eEEEEeCCceEEeehhhcCCCCHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCC--CE
Confidence 99999999 4999999999 59999998 45789999999999999999999996 9999999999999999999 99
Q ss_pred EEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccC
Q 000316 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 376 (1678)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G 376 (1678)
||||||.++..... ......||..|||||.+.+..|+...|+|+.|
T Consensus 219 KicDFGVS~~lvnS-------------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLG 264 (364)
T KOG0581|consen 219 KICDFGVSGILVNS-------------IANTFVGTSAYMSPERISGESYSVKSDIWSLG 264 (364)
T ss_pred EeccccccHHhhhh-------------hcccccccccccChhhhcCCcCCcccceeccc
Confidence 99999999965421 11234589999999998665444444444444
No 21
>KOG1787 consensus Kinase A-anchor protein Neurobeachin and related BEACH and WD40 repeat proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.1e-40 Score=425.01 Aligned_cols=240 Identities=34% Similarity=0.499 Sum_probs=203.2
Q ss_pred ccccccccCccchhhhHhhhccccCCCCCCCcCCcccceEe-cCCCC-CCCCCCCcCccCCcchhhhcccccc-hhcccC
Q 000316 368 SQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTK-PDENFDSGSRDLSKSKWRLAKGDEQ-LDFTYS 444 (1678)
Q Consensus 368 ~~~d~W~~G~isnfeyL~~ln~~aGRs~~dl~q~pv~pwv~-d~~~~-~~~~~~~~~rdLskp~~~l~~~~~~-~~~~~~ 444 (1678)
..+..|+.|+|+||+|+|.+|..+||+|+|++||||||||+ ||.+. .|.+.+.+||||+||+|+++..... +...|.
T Consensus 470 ~~t~~w~~~~~s~~~~l~~l~t~agrsyndl~qypvfpwvl~dy~s~~ld~s~~~~frdlsKpigaln~~~~~~f~dry~ 549 (1126)
T KOG1787|consen 470 GITQEWQAREISNFEVLMQLNTSAGRSYNDLTQYPVFPWVLRDYSSETLDLSKLSTFRDLSKPIGALNPKRAYLFRDRYE 549 (1126)
T ss_pred CccHHHHhhccccHHHHHHHHhccCcccCccccCCCCCeeeecccchhhhcccchhHHhhcCcccCCCcccchhHhhhhh
Confidence 56788999999999999999999999999999999999999 77665 5889999999999999999875543 456777
Q ss_pred CCC----CCcccCccccCcceeeeeecccCchhHHHHHhhcc--cCCCCccchHHHhh------cCCCcccccccccCCc
Q 000316 445 SSE----IPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSV--YEPNEYPSTMQRLY------QWTPDECIPEFYCDPQ 512 (1678)
Q Consensus 445 ~~~----~~~h~~~~~~s~~~v~~y~~r~~p~~~l~~~~~~~--~~~~~~~~~~~~~~------~~~~~EliPeff~~p~ 512 (1678)
+.+ ..+||+++|++...+++|++|.+||+.++.+++.+ +.+.+-++++.+-+ ..|++|+||||||.||
T Consensus 550 s~~D~~i~~~~~~thys~~~~~l~~l~rvepf~S~~~~l~~gkfd~~dr~~~sv~~~~r~~l~d~sdvkelipeffy~p~ 629 (1126)
T KOG1787|consen 550 SFEDQAIPSFHYGTHYSSAANVLAYLLRVEPFTSLHLQLQDGKFDHADRAFSSVASSWRRCLRDTSDVKELIPEFFYFPE 629 (1126)
T ss_pred ccccccccccccccccccccceeeeeeecCccccccccccccccccchhhHHHHHHHHhhhccchhhHHHhhhHHHHHHH
Confidence 665 34799999999999999999999999999888754 34444333333322 2368999999999999
Q ss_pred ccccCC----------CCCCCeecCCCCCCHHHHHHHHHHhhcchHHHccCCCccccccccCCCchhhHhcCCCCCCCCC
Q 000316 513 IFYSQH----------PGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSE 582 (1678)
Q Consensus 513 ~~~~~~----------~~~~dv~lP~Wa~~~~~Fi~~~r~aLEs~~Vs~~l~~WIDlifG~kq~g~~a~~~~Nv~~~~~~ 582 (1678)
+|.|.+ ++|.||.|||||++|++|+..||+||||+|||.++|.||||||||||+|.+|+.|.|||+..+|
T Consensus 630 ll~~~~~~~lg~~~dg~~vi~v~lppwa~~pe~f~~~nr~aLes~fvs~~l~~widlifg~Kq~g~ea~~a~nvf~~~ty 709 (1126)
T KOG1787|consen 630 LLVNSNLYNLGVRVDGEPVIDVVLPPWAKSPEDFETRNREALESEFVSCQLHQWIDLIFGYKQRGPEAVRAMNVFYYLTY 709 (1126)
T ss_pred HHhccccccceeecCCccceeeecccccCCHHHHHHHHHHHhhccccccccchhHHhhhhHhhcCHHHHHhhhhhccCCc
Confidence 998753 4689999999999999999999999999999999999999999999999999999999998764
Q ss_pred CC-----------c--------ccccC--cCcccCCCCCCCCCCcc
Q 000316 583 PT-----------K--------PKSVG--RLQLFTQPHPVRQTATW 607 (1678)
Q Consensus 583 ~~-----------~--------~~~~g--~~qlf~~pHp~r~~~~~ 607 (1678)
.. . +..+| |.|+|.++||+|.....
T Consensus 710 eG~v~~~~~~d~~~~~eai~~~i~~f~~~~~~~~~e~~~~~~~~~~ 755 (1126)
T KOG1787|consen 710 EGAVDLDSITDQVLRTEAIEAQIASFGQTPSQLLQEQHPPRASESK 755 (1126)
T ss_pred cccccccccCChhHHHHHHHHHHhhccccchhhhhhccCCcchhcc
Confidence 21 1 12345 79999999999976555
No 22
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=6.9e-39 Score=374.65 Aligned_cols=173 Identities=26% Similarity=0.319 Sum_probs=154.3
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
+++|.+.+.||+|+||.||||+.+ .+.+.||+|.+.+....+.+.++.. +|++|++.++|||||.+
T Consensus 1 me~yhv~e~iG~Gsfg~VYKgrrK------~t~~~vAik~i~K~gr~~k~l~~l~--------~ev~i~r~lkHpniv~m 66 (808)
T KOG0597|consen 1 MEQYHVYEMIGEGSFGRVYKGRRK------YTIQVVAIKFIDKSGRNEKELKNLR--------QEVRILRSLKHPNIVEM 66 (808)
T ss_pred CcchhHHHHhcCCccceeeecccc------cceeEEEEEEehhcCCchHHHHHHH--------HHHHHHHhcCCcchhhH
Confidence 468999999999999999999965 5789999999999877777776666 99999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
++.|++..++++|.|||.|+|+.+|. ..+.++|+.++.+++|++.||.|||+++|+|||+||.|||++.+| ++|+|
T Consensus 67 ~esfEt~~~~~vVte~a~g~L~~il~--~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~--~~Klc 142 (808)
T KOG0597|consen 67 LESFETSAHLWVVTEYAVGDLFTILE--QDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGG--TLKLC 142 (808)
T ss_pred HHhhcccceEEEEehhhhhhHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCC--ceeec
Confidence 99999999999999999999999999 567799999999999999999999999999999999999999999 99999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
|||+||...... ...+...|||.|||||++.
T Consensus 143 dFg~Ar~m~~~t-----------~vltsikGtPlYmAPElv~ 173 (808)
T KOG0597|consen 143 DFGLARAMSTNT-----------SVLTSIKGTPLYMAPELVE 173 (808)
T ss_pred hhhhhhhcccCc-----------eeeeeccCcccccCHHHHc
Confidence 999999654211 1123446999999999864
No 23
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-39 Score=368.46 Aligned_cols=211 Identities=20% Similarity=0.255 Sum_probs=179.7
Q ss_pred ccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccc
Q 000316 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1678)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV 238 (1678)
...++|...++||+|+||+||+|+++ .++..||||.+.+.+......+... .|+++|++++|||||
T Consensus 7 ~~~~~y~~~~~iG~GsfavVykg~h~------~~~~~VAIK~i~~~~l~~k~~e~L~--------~Ei~iLkel~H~nIV 72 (429)
T KOG0595|consen 7 RVVGDYELSREIGSGSFAVVYKGRHK------KSGTEVAIKCIAKKKLNKKLVELLL--------SEIKILKELKHPNIV 72 (429)
T ss_pred cccccceehhhccCcceEEEEEeEec------cCCceEEeeeehhhccCHHHHHHHH--------HHHHHHHhcCCccee
Confidence 34789999999999999999999976 5779999999988655444333333 999999999999999
Q ss_pred ceeeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCC-Cc--
Q 000316 239 PVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS-CW-- 314 (1678)
Q Consensus 239 ~l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~-g~-- 314 (1678)
+++++..+++.+|+|||||. |||.++|+ ..+.+++..++.++.||+.||++||+++||||||||+||||+.. +.
T Consensus 73 ~l~d~~~~~~~i~lVMEyC~gGDLs~yi~--~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~ 150 (429)
T KOG0595|consen 73 RLLDCIEDDDFIYLVMEYCNGGDLSDYIR--RRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDT 150 (429)
T ss_pred eEEEEEecCCeEEEEEEeCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCC
Confidence 99999999999999999999 59999999 56689999999999999999999999999999999999999975 22
Q ss_pred -eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCC
Q 000316 315 -SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1678)
Q Consensus 315 -~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGR 393 (1678)
..+||+|||+||..... ....+-| |+|.|||||+++...|+.++|+|+.|.|. |+.+....+|...
T Consensus 151 ~~~LKIADFGfAR~L~~~------~~a~tlc------GSplYMAPEV~~~~~YdAKADLWSiG~Il-yq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 151 SPVLKIADFGFARFLQPG------SMAETLC------GSPLYMAPEVIMSQQYDAKADLWSIGTIL-YQCLTGKPPFDAE 217 (429)
T ss_pred CceEEecccchhhhCCch------hHHHHhh------CCccccCHHHHHhccccchhhHHHHHHHH-HHHHhCCCCcccc
Confidence 37999999999986621 1122223 79999999999999999999999999887 7777777777766
Q ss_pred CCCCC
Q 000316 394 RWGDY 398 (1678)
Q Consensus 394 s~~dl 398 (1678)
+..+|
T Consensus 218 t~~eL 222 (429)
T KOG0595|consen 218 TPKEL 222 (429)
T ss_pred CHHHH
Confidence 65544
No 24
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-37 Score=372.74 Aligned_cols=177 Identities=17% Similarity=0.204 Sum_probs=149.3
Q ss_pred cccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcc
Q 000316 158 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 237 (1678)
Q Consensus 158 ~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNI 237 (1678)
....+-|++++.||.|+.|.|.+|++. ++|+.+|||++.+.....+....-+. +||-+|+.+.||||
T Consensus 8 ~~tiGpwkLgkTLG~Gstg~vrlakh~------~TGqlaaiKii~k~~~~s~s~~~~Ie-------rEIviMkLi~HpnV 74 (786)
T KOG0588|consen 8 KNTIGPWKLGKTLGKGSTGCVRLAKHA------ETGQLAAIKIIPKRSELSSSQPAGIE-------REIVIMKLIEHPNV 74 (786)
T ss_pred cccccceeccccccCCCCceehhhhcc------cccceeEEEeeccccccccccccchh-------hhhHHHHHhcCCCe
Confidence 344677999999999999999999965 79999999999876322222111121 99999999999999
Q ss_pred cceeeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCcee
Q 000316 238 APVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1678)
Q Consensus 238 V~l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~ 316 (1678)
+++|+++++..++|+|+||++ |.|++++. .++.+++.++..+++||+.|+.|||..+|+||||||+|+||+..+ .
T Consensus 75 l~LydVwe~~~~lylvlEyv~gGELFdylv--~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~--n 150 (786)
T KOG0588|consen 75 LRLYDVWENKQHLYLVLEYVPGGELFDYLV--RKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKN--N 150 (786)
T ss_pred eeeeeeeccCceEEEEEEecCCchhHHHHH--hhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhccc--C
Confidence 999999999999999999999 59999998 678899999999999999999999999999999999999999999 7
Q ss_pred EEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccccc
Q 000316 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS 363 (1678)
Q Consensus 317 lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~ 363 (1678)
|||+|||+|..... ..--.+.| |+|+|++||++++
T Consensus 151 IKIADFGMAsLe~~------gklLeTSC------GSPHYA~PEIV~G 185 (786)
T KOG0588|consen 151 IKIADFGMASLEVP------GKLLETSC------GSPHYAAPEIVSG 185 (786)
T ss_pred EeeeccceeecccC------CccccccC------CCcccCCchhhcC
Confidence 99999999984321 11122333 6899999999754
No 25
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-37 Score=372.05 Aligned_cols=176 Identities=16% Similarity=0.133 Sum_probs=149.9
Q ss_pred cccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-CCc
Q 000316 158 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPN 236 (1678)
Q Consensus 158 ~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-HpN 236 (1678)
....++|.++++||+|+||+|+++..+ .+++.+|||.++++.+...+..+.+. .|.+|+.... ||.
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k------~~~e~yAIK~LKK~~Il~~d~Ve~~~-------~EkrI~~la~~HPF 430 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELK------GTNEYYAIKVLKKGDILQRDEVESLM-------CEKRIFELANRHPF 430 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEc------CCCcEEEEEEeeccceeccccHHHHH-------HHHHHHHHhccCCe
Confidence 345779999999999999999999975 57789999999998877666655553 8999888875 999
Q ss_pred ccceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCce
Q 000316 237 VAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1678)
Q Consensus 237 IV~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~ 315 (1678)
+++|+..|++++++|+||||+.| |+..++ ....+++..+++|+..|+.||.|||++|||+||||.+|||+|.+|
T Consensus 431 L~~L~~~fQT~~~l~fvmey~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eG-- 505 (694)
T KOG0694|consen 431 LVNLFSCFQTKEHLFFVMEYVAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEG-- 505 (694)
T ss_pred EeecccccccCCeEEEEEEecCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccC--
Confidence 99999999999999999999996 733333 467899999999999999999999999999999999999999999
Q ss_pred eEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 316 ~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
++||+||||+|....... ...+-| |||.|||||++.
T Consensus 506 h~kiADFGlcKe~m~~g~-----~TsTfC------GTpey~aPEil~ 541 (694)
T KOG0694|consen 506 HVKIADFGLCKEGMGQGD-----RTSTFC------GTPEFLAPEVLT 541 (694)
T ss_pred cEEecccccccccCCCCC-----cccccc------CChhhcChhhhc
Confidence 999999999997653222 222333 799999999864
No 26
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.4e-37 Score=342.35 Aligned_cols=159 Identities=19% Similarity=0.206 Sum_probs=132.9
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
....|+.+++||+|+||.||+|..+. +.....+.+|||+++..+.... +..+|+||+.++++++|||||.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~--~n~kr~k~yAiKkfk~~kd~tG--------iS~SAcREiaL~REl~h~nvi~ 91 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKN--TNDKRTKEYAIKKFKGEKDGTG--------ISMSACREIALLRELKHPNVIS 91 (438)
T ss_pred HHHHhhccceecccccceeeEeeecc--CCcccchhhHHHHHhccCCCCC--------cCHHHHHHHHHHHHhcCCcchh
Confidence 35579999999999999999997442 1112255899999986544322 2234569999999999999999
Q ss_pred eeeEEEe-CCeEEEeccCCCCCHHHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc-
Q 000316 240 VLGLLKT-SGLITSVIPKTPYTLENILQFS---PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW- 314 (1678)
Q Consensus 240 l~~~~~~-~~~~~lVmEy~~g~L~~~l~~~---~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~- 314 (1678)
|..+|.. +..+++++||.+.||..+|+.. +...++...++.++.||+.|+.|||++.|+||||||.|||+..+|.
T Consensus 92 Lv~Vfl~~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgpe 171 (438)
T KOG0666|consen 92 LVKVFLSHDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPE 171 (438)
T ss_pred HHHHHhccCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCc
Confidence 9999988 7799999999999999999863 3456899999999999999999999999999999999999998822
Q ss_pred -eeEEEEecCCcccC
Q 000316 315 -SWLYICDKPLVGFN 328 (1678)
Q Consensus 315 -~~lKL~DFGlA~~~ 328 (1678)
+.+||+|||+||..
T Consensus 172 rG~VKIaDlGlaR~~ 186 (438)
T KOG0666|consen 172 RGRVKIADLGLARLF 186 (438)
T ss_pred cCeeEeecccHHHHh
Confidence 29999999999953
No 27
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=2.2e-36 Score=343.40 Aligned_cols=267 Identities=22% Similarity=0.323 Sum_probs=240.5
Q ss_pred eecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecC--CCEEEEEecCCCCCCeEEEEeCCCCe
Q 000316 1288 FPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQD--ECTVFTAGIGPGFKGTVQKWELTRIN 1364 (1678)
Q Consensus 1288 ~fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspd--g~~LaSgS~d~~~DgtVrlWDl~tg~ 1364 (1678)
+||.|+.. |+|||++|.+++|+.. ...+++|+||++.|.++.|+|. +..+|||+. ||+|++|++++..
T Consensus 182 ~fS~ds~~-----laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~----Dgtvklw~~~~e~ 252 (459)
T KOG0272|consen 182 SFSRDSKH-----LATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASA----DGTVKLWKLSQET 252 (459)
T ss_pred EeecCCCe-----EEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeecc----CCceeeeccCCCc
Confidence 49999987 9999999999999988 7799999999999999999997 579999997 9999999999999
Q ss_pred EEEEEecCCccEEEEeecCCCCcEE--eCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCC
Q 000316 1365 CVSGYYGHEEVVNDICVLSSSGRIA--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTL 1442 (1678)
Q Consensus 1365 ~l~~l~gH~~~V~sV~fs~~~~~la--S~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~ 1442 (1678)
.++.+.||...|..|+|+|+|.+|+ |.|.+-++||+++++.+....+ |
T Consensus 253 ~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEG------------------------------H 302 (459)
T KOG0272|consen 253 PLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEG------------------------------H 302 (459)
T ss_pred chhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcc------------------------------c
Confidence 9999999999999999999999994 4599999999999887644444 4
Q ss_pred CCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccC
Q 000316 1443 SSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVA 1522 (1678)
Q Consensus 1443 s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p 1522 (1678)
+.+|.+++|+ +||..+++|+.|..-||||+++|+++..+.+|. ..|.+|+|+ |
T Consensus 303 s~~v~~iaf~----------~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~------k~I~~V~fs-----------P 355 (459)
T KOG0272|consen 303 SKGVFSIAFQ----------PDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHI------KEILSVAFS-----------P 355 (459)
T ss_pred ccccceeEec----------CCCceeeccCccchhheeecccCcEEEEecccc------cceeeEeEC-----------C
Confidence 4555555555 569999999999999999999999999999754 457888875 5
Q ss_pred CCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cC-CCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCE
Q 000316 1523 SPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-AP-EDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGI 1600 (1678)
Q Consensus 1523 ~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-sp-dg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V 1600 (1678)
+|-.+||||.|++++|||+|..+++.++.+|.+-|+.|. .| .|.+|+|+|.|++++||...+. .++.++.||.+.|
T Consensus 356 NGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~--~~~ksLaGHe~kV 433 (459)
T KOG0272|consen 356 NGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTW--SPLKSLAGHEGKV 433 (459)
T ss_pred CceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCc--ccchhhcCCccce
Confidence 667999999999999999999999999999999999999 76 7789999999999999999888 6788999999999
Q ss_pred EE--EEecCCEEEEEeCCC-eEEEe
Q 000316 1601 SG--FSVWGQDVISISNNK-IGLSS 1622 (1678)
Q Consensus 1601 ~a--fSpdg~~LaSgs~D~-I~vwd 1622 (1678)
.+ +++|++.++|++.|+ +++|.
T Consensus 434 ~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 434 ISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred EEEEeccCCceEEEeccCceeeecc
Confidence 95 999999999999999 99995
No 28
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=5.2e-36 Score=340.37 Aligned_cols=277 Identities=21% Similarity=0.251 Sum_probs=242.5
Q ss_pred cccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCC--CcEEeC--CCcEEEEEC
Q 000316 1325 AHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSS--GRIASC--DGTLHVWNS 1400 (1678)
Q Consensus 1325 gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~--~~laS~--DgtVrIWD~ 1400 (1678)
|-+.+|..+.||.|++.|+|||- +|.++||+..+...+++|.||++.|.++.|+|.. ..++|| ||+|++|++
T Consensus 173 gd~rPis~~~fS~ds~~laT~sw----sG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~ 248 (459)
T KOG0272|consen 173 GDTRPISGCSFSRDSKHLATGSW----SGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKL 248 (459)
T ss_pred cCCCcceeeEeecCCCeEEEeec----CCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeecc
Confidence 56788999999999999999995 9999999999999999999999999999999973 356555 999999999
Q ss_pred CCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEE
Q 000316 1401 QTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFI 1480 (1678)
Q Consensus 1401 ~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlW 1480 (1678)
.+...+..+.+|. .+|..++|+|+|++|++++.|.+-++|
T Consensus 249 ~~e~~l~~l~gH~----------------------------------------~RVs~VafHPsG~~L~TasfD~tWRlW 288 (459)
T KOG0272|consen 249 SQETPLQDLEGHL----------------------------------------ARVSRVAFHPSGKFLGTASFDSTWRLW 288 (459)
T ss_pred CCCcchhhhhcch----------------------------------------hhheeeeecCCCceeeecccccchhhc
Confidence 9888888887663 235566777789999999999999999
Q ss_pred ECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEE
Q 000316 1481 DINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKL 1560 (1678)
Q Consensus 1481 Dl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sv 1560 (1678)
|++++..+...+|| +..|.+++|. +||.++++|+-|..-+|||+|+|+++..+.||...|.+|
T Consensus 289 D~~tk~ElL~QEGH------s~~v~~iaf~-----------~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V 351 (459)
T KOG0272|consen 289 DLETKSELLLQEGH------SKGVFSIAFQ-----------PDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSV 351 (459)
T ss_pred ccccchhhHhhccc------ccccceeEec-----------CCCceeeccCccchhheeecccCcEEEEecccccceeeE
Confidence 99999988777755 4557888875 566899999999999999999999999999999999999
Q ss_pred E-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE--EEEe-cCCEEEEEeCCC-eEEEecCCCCCCCCccee
Q 000316 1561 A-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSV-WGQDVISISNNK-IGLSSLSKSADEDGQHRL 1635 (1678)
Q Consensus 1561 a-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSp-dg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~ 1635 (1678)
+ +|+|..|||||.|++++|||++.. ..++++.+|++-|+ .|+| .|.+|+|+|.|. +++|+-. +.++
T Consensus 352 ~fsPNGy~lATgs~Dnt~kVWDLR~r--~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~-----~~~~-- 422 (459)
T KOG0272|consen 352 AFSPNGYHLATGSSDNTCKVWDLRMR--SELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTR-----TWSP-- 422 (459)
T ss_pred eECCCceEEeecCCCCcEEEeeeccc--ccceecccccchhhheEecccCCeEEEEcccCcceeeecCC-----Cccc--
Confidence 9 999999999999999999999987 56899999999999 5898 688999999999 9999953 2221
Q ss_pred ccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1636 VPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1636 ~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
+ ... .+|.+.|-++++++|+..++|+|.|.++|+|.
T Consensus 423 ----~-ksL--aGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 423 ----L-KSL--AGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred ----c-hhh--cCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 1 111 26999999999999999999999999999994
No 29
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-35 Score=362.39 Aligned_cols=314 Identities=17% Similarity=0.261 Sum_probs=204.0
Q ss_pred EeCCCceeEEeccccccEEEEEEecCC-CEEEEEecCCCCCCeEEEEeCCC-------CeEEEEEecCCccEEEEeecCC
Q 000316 1313 WKIKASILSSIRAHHGALRSVAVGQDE-CTVFTAGIGPGFKGTVQKWELTR-------INCVSGYYGHEEVVNDICVLSS 1384 (1678)
Q Consensus 1313 Wd~~~~~l~tl~gH~~~V~svafspdg-~~LaSgS~d~~~DgtVrlWDl~t-------g~~l~~l~gH~~~V~sV~fs~~ 1384 (1678)
|+.+|..+..+..|+..|..++.++.. .+++|||. ||+||+||+.. .++..++.--...|.++.....
T Consensus 1034 W~p~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~----DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~ 1109 (1431)
T KOG1240|consen 1034 WNPRGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSD----DGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGN 1109 (1431)
T ss_pred CCccceEeehhhhccccccceeecCCCCceEEEecC----CceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccC
Confidence 888899999999999999999998876 89999997 99999999743 2344455445677888888777
Q ss_pred CCcE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEee
Q 000316 1385 SGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHI 1462 (1678)
Q Consensus 1385 ~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~s 1462 (1678)
+..+ ++.||.|++.++.-....+... .+..+.+. ...+..+.+.++.
T Consensus 1110 ~~~~Av~t~DG~v~~~~id~~~~~~~~~---------------------~~~ri~n~----------~~~g~vv~m~a~~ 1158 (1431)
T KOG1240|consen 1110 GDQFAVSTKDGSVRVLRIDHYNVSKRVA---------------------TQVRIPNL----------KKDGVVVSMHAFT 1158 (1431)
T ss_pred CCeEEEEcCCCeEEEEEcccccccccee---------------------eeeecccc----------cCCCceEEeeccc
Confidence 7777 5559999999987521110000 00001111 1111112222222
Q ss_pred cC-CC-EEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEe
Q 000316 1463 EC-VE-RLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFD 1540 (1678)
Q Consensus 1463 p~-g~-~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD 1540 (1678)
.. +. .++.+..-+.|..||+++.....+++... -.+.|+++|.+ +.++|++.|+..|.+.+||
T Consensus 1159 ~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~----~hG~vTSi~id-----------p~~~WlviGts~G~l~lWD 1223 (1431)
T KOG1240|consen 1159 AIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQL----RHGLVTSIVID-----------PWCNWLVIGTSRGQLVLWD 1223 (1431)
T ss_pred ccccceeEEEEEeccceEEecchhhhhHHhhhcCc----cccceeEEEec-----------CCceEEEEecCCceEEEEE
Confidence 22 23 67788888999999999877666555332 24568888876 4557999999999999999
Q ss_pred CCCCcEEEEEe-ccCCCeEEEE-cC---CCCEEEEEe--CCCcEEEEEcCCCCCCCCeEeecC-C---------------
Q 000316 1541 VRSGNVIASWR-AHDGYVTKLA-AP---EDHLLVSSS--LDKTLRIWDLRRNWPSQPTVFKGH-T--------------- 1597 (1678)
Q Consensus 1541 ~~tg~~i~~l~-gH~~~V~sva-sp---dg~~LaSgS--~DgtI~IWDl~~~~~~~~~~l~gH-~--------------- 1597 (1678)
+|=+.++..|. ++..+++.|. +| .....++++ ..+.|.+|++.++.. ..++-.- .
T Consensus 1224 LRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~--~~vl~~s~~~p~ls~~~Ps~~~~k 1301 (1431)
T KOG1240|consen 1224 LRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLR--QTVLWASDGAPILSYALPSNDARK 1301 (1431)
T ss_pred eecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCcc--eEEEEcCCCCcchhhhcccccCCC
Confidence 99999999987 4567888887 33 234555544 467899999998842 2232211 0
Q ss_pred -C---CEE-EEEecCCEEEEEeCCC-eEEEecCCCCCC-----------------------CCcc----------eeccc
Q 000316 1598 -N---GIS-GFSVWGQDVISISNNK-IGLSSLSKSADE-----------------------DGQH----------RLVPQ 1638 (1678)
Q Consensus 1598 -~---~V~-afSpdg~~LaSgs~D~-I~vwdl~~~~~~-----------------------~g~~----------~~~~~ 1638 (1678)
. .+. ++.--+..+.+|+.|. |+.||...+.-. .|.. ....+
T Consensus 1302 p~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s~~~~~~~~s~~~~~i~~~~~i~e~i~~~~tv~~t 1381 (1431)
T KOG1240|consen 1302 PDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPSTSYSTNSESYDLSTIPGSQFIDEFIIYQQTVGLT 1381 (1431)
T ss_pred CCcccceeeecccCCceeeecCCccceeeccCCCcccccccccCccccccccchhccccccCCCccchhhhhhhhhcCch
Confidence 0 111 2333456777777766 999997643211 0000 00000
Q ss_pred ----eeeeeec-----CCCccCcEEEEEEecCC-CEEEEEeCCCcEEEcC
Q 000316 1639 ----KLYMVDN-----GAKNLSVLSSISILPFS-RLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1639 ----kl~~~~~-----g~~h~~~I~svafsPd~-~lLatgs~DG~IrIwd 1678 (1678)
+...... ...|..+|+++++.-.. .+|++++.||.|+||-
T Consensus 1382 ~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1382 EALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRDGVIKIWK 1431 (1431)
T ss_pred hhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCCCeeeecC
Confidence 0000000 12678899999887544 6899999999999993
No 30
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.6e-36 Score=368.23 Aligned_cols=150 Identities=21% Similarity=0.201 Sum_probs=134.7
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-C-----Cc
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-H-----PN 236 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-H-----pN 236 (1678)
+|++++.||+|+||.|.+|.+. .+++.||||+++..+... .+.. .|+.+|..|+ | -|
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~------~T~e~VAIKIiKN~k~f~---~Q~~--------~Ei~iL~~ln~~d~~~~~n 249 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDH------KTGEIVAIKIIKNKKRFL---RQAQ--------IEIRILELLNKHDPDDKYN 249 (586)
T ss_pred EEEEEEEecccccceeEEEEec------CCCcEEEEEeeccChHHH---HHHH--------HHHHHHHHHhccCCCCCee
Confidence 7999999999999999999975 689999999997654322 2222 8999999997 4 38
Q ss_pred ccceeeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCcee
Q 000316 237 VAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1678)
Q Consensus 237 IV~l~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~ 316 (1678)
||+++++|...+++|||+|.++.+|.++|+.++...++...++.++.||+.||.+||+.||||+|||||||||.+-+...
T Consensus 250 ~Vrm~d~F~fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~ 329 (586)
T KOG0667|consen 250 IVRMLDYFYFRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSR 329 (586)
T ss_pred EEEeeeccccccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCc
Confidence 99999999999999999999999999999988888899999999999999999999999999999999999999877678
Q ss_pred EEEEecCCcccCC
Q 000316 317 LYICDKPLVGFNS 329 (1678)
Q Consensus 317 lKL~DFGlA~~~~ 329 (1678)
|||+|||.|.+..
T Consensus 330 vKVIDFGSSc~~~ 342 (586)
T KOG0667|consen 330 IKVIDFGSSCFES 342 (586)
T ss_pred eeEEecccccccC
Confidence 9999999998543
No 31
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-36 Score=363.57 Aligned_cols=175 Identities=23% Similarity=0.225 Sum_probs=148.1
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH--HHHHHHHhcCCCchhHHHhhccCC-CCc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ--ESKNFLRLIGVPSFDESSVPGCLR-HPN 236 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~--~~~~~l~~~~~~~~~Ei~iL~~l~-HpN 236 (1678)
..++|++.+.||+|+||.|++|.+. .++..||+|++++.+.... ...+.++ +|+.+++.++ |||
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~------~t~~~vAiKii~~~~~~~~~~~~~~~i~-------rEi~~~~~~~~Hpn 81 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHR------LTGEKVAIKIIDRKKVSSKSQKLDELIK-------REISILRRLRSHPN 81 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeec------cCCCeEEEEEechhcccccccccchhhH-------HHHHHHHHhccCCC
Confidence 3678999999999999999999965 4679999998876533211 2333443 8999999999 999
Q ss_pred ccceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCC-Cc
Q 000316 237 VAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS-CW 314 (1678)
Q Consensus 237 IV~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~-g~ 314 (1678)
|+++++++.+...+|+|||||.| +|+++|. ..+++.|.+++.+++||+.||+|||++||+||||||||||++.+ +
T Consensus 82 I~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~--~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~- 158 (370)
T KOG0583|consen 82 IIRLLEVFATPTKIYIVMEYCSGGDLFDYIV--NKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEG- 158 (370)
T ss_pred EeEEEEEEecCCeEEEEEEecCCccHHHHHH--HcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCC-
Confidence 99999999999999999999995 9999999 37789999999999999999999999999999999999999999 7
Q ss_pred eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 315 ~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
.+||+|||++..... ......+.| ||+.|+|||++.
T Consensus 159 -~~Kl~DFG~s~~~~~-----~~~~l~t~c------Gsp~Y~aPEvl~ 194 (370)
T KOG0583|consen 159 -NLKLSDFGLSAISPG-----EDGLLKTFC------GSPAYAAPEVLS 194 (370)
T ss_pred -CEEEeccccccccCC-----CCCcccCCC------CCcccCCHHHhC
Confidence 899999999996531 112233333 899999999974
No 32
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-37 Score=330.92 Aligned_cols=175 Identities=18% Similarity=0.179 Sum_probs=147.3
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..+.|++.+.||+|.|+.|+++.+. .+|+.+|+|+++..+....+.++.- +|+.|-+.|+|||||+
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~------~tg~~fa~kiin~~k~~~~~~e~l~--------rEarIC~~LqHP~Ivr 74 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHK------TTGLEFAAKIINTKKLSARDFQKLE--------REARICRKLQHPNIVR 74 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhc------cchHHHHHHHhhhhhhccccHHHHH--------HHHHHHHhcCCCcEee
Confidence 4678999999999999999998854 7899999999998777766555544 9999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc-eeE
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-SWL 317 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~-~~l 317 (1678)
|.+.+......|||+|+|.| +|..-|- .+..++|..+-.+++||+.||.|||.+||||||+||+|+|+.+... .-+
T Consensus 75 L~~ti~~~~~~ylvFe~m~G~dl~~eIV--~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~v 152 (355)
T KOG0033|consen 75 LHDSIQEESFHYLVFDLVTGGELFEDIV--AREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAV 152 (355)
T ss_pred hhhhhcccceeEEEEecccchHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCce
Confidence 99999999999999999996 7766665 2366899999999999999999999999999999999999975432 479
Q ss_pred EEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
||+|||+|...... ..-.+..|||.|||||++.
T Consensus 153 KL~~FGvAi~l~~g------------~~~~G~~GtP~fmaPEvvr 185 (355)
T KOG0033|consen 153 KLADFGLAIEVNDG------------EAWHGFAGTPGYLSPEVLK 185 (355)
T ss_pred eecccceEEEeCCc------------cccccccCCCcccCHHHhh
Confidence 99999999965521 0112346899999999864
No 33
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=3e-36 Score=354.73 Aligned_cols=250 Identities=18% Similarity=0.186 Sum_probs=208.9
Q ss_pred cccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCc
Q 000316 158 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPN 236 (1678)
Q Consensus 158 ~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpN 236 (1678)
.+...+|..++.||+|+|++|++|+++ .+++.||||++.+.....+.....+. +|-.+|..| .||.
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~------~t~keYAiKVl~K~~Iike~KvkYV~-------~Ek~~l~~L~~hPg 135 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREK------ATGKEYAIKVLDKRYIIKEKKVKYVT-------REKEALTQLSGHPG 135 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeec------CCCceeeHhhhhHHHHHhhcccchhh-------HHHHHHHHhhCCCC
Confidence 555779999999999999999999965 58899999999887666666666665 999999999 8999
Q ss_pred ccceeeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCce
Q 000316 237 VAPVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1678)
Q Consensus 237 IV~l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~ 315 (1678)
||+||..|+++..+|+|+||++ |+|.++|+ +-+.|++..+++|+.||+.||+|||++|||||||||||||++.+|
T Consensus 136 ivkLy~TFQD~~sLYFvLe~A~nGdll~~i~--K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dm-- 211 (604)
T KOG0592|consen 136 IVKLYFTFQDEESLYFVLEYAPNGDLLDLIK--KYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDG-- 211 (604)
T ss_pred eEEEEEEeecccceEEEEEecCCCcHHHHHH--HhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCC--
Confidence 9999999999999999999999 69999999 568899999999999999999999999999999999999999999
Q ss_pred eEEEEecCCcccCCCCCccc----ccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhcccc
Q 000316 316 WLYICDKPLVGFNSIADWCT----IPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA 391 (1678)
Q Consensus 316 ~lKL~DFGlA~~~~~~~~~~----~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~a 391 (1678)
++||+|||.|+......... ....... .....+||..|.+||++.....++.+|+|.+|||. +.+++
T Consensus 212 hikITDFGsAK~l~~~~~~~~~~~~~~~a~s--~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCil-------yQmla 282 (604)
T KOG0592|consen 212 HIKITDFGSAKILSPSQKSQENPVDPNQASS--RRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCIL-------YQMLA 282 (604)
T ss_pred cEEEeeccccccCChhhccccCccCcccccC--cccceeeeecccCHHHhcCCCCCcccchHHHHHHH-------HHHhc
Confidence 99999999999765432221 1111111 12346799999999999999999999999999775 44557
Q ss_pred CCC-CCCCcCCcccceEecCCCCCCCCCCCcCccCCcchhhhc
Q 000316 392 GRR-WGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRLA 433 (1678)
Q Consensus 392 GRs-~~dl~q~pv~pwv~d~~~~~~~~~~~~~rdLskp~~~l~ 433 (1678)
|.+ |.+-++|-+|.-|++..-+.....|...|||-+-+-+.+
T Consensus 283 G~PPFra~NeyliFqkI~~l~y~fp~~fp~~a~dLv~KLLv~d 325 (604)
T KOG0592|consen 283 GQPPFRAANEYLIFQKIQALDYEFPEGFPEDARDLIKKLLVRD 325 (604)
T ss_pred CCCCCccccHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHccC
Confidence 766 788999999999995544444556677888877665443
No 34
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-36 Score=332.11 Aligned_cols=211 Identities=21% Similarity=0.265 Sum_probs=183.6
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|+.++.||.|+||.|.+++++ .++..+|+|++++.+.......+... +|..+|+.+.||++++
T Consensus 42 ~l~dfe~~~tlGtGSFGrV~LVr~k------~~g~yYAmKvL~k~~vVklKQveH~~-------nEk~vL~~v~~PFlv~ 108 (355)
T KOG0616|consen 42 SLQDFERLKTLGTGSFGRVHLVREK------HSGNYYAMKVLDKQKVVKLKQVEHTH-------NEKRVLKAVSHPFLVK 108 (355)
T ss_pred chhhhhheeeeccCccceEEEEEEc------cCCceeehhhcCHHHHHHHHHHHHHh-------hHHHHHhhccCceeEE
Confidence 3678999999999999999999976 57899999999987766655555554 9999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
+++.|.+.+++||||||++| .|+.+++ +.+++++..+++|+.||+.||+|||+++|++|||||||||||.+| ++|
T Consensus 109 l~~t~~d~~~lymvmeyv~GGElFS~Lr--k~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G--~iK 184 (355)
T KOG0616|consen 109 LYGTFKDNSNLYMVMEYVPGGELFSYLR--KSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNG--HIK 184 (355)
T ss_pred EEEeeccCCeEEEEEeccCCccHHHHHH--hcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCC--cEE
Confidence 99999999999999999995 9999999 678899999999999999999999999999999999999999999 999
Q ss_pred EEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCC-CCC
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR-WGD 397 (1678)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs-~~d 397 (1678)
|+|||+|+..... ..+-| |||.|+|||++..++|+.++|.|+.| ++..++++|.+ |.+
T Consensus 185 itDFGFAK~v~~r--------T~TlC------GTPeYLAPEii~sk~ynkavDWWalG-------VLIYEMlaG~pPF~~ 243 (355)
T KOG0616|consen 185 ITDFGFAKRVSGR--------TWTLC------GTPEYLAPEIIQSKGYNKAVDWWALG-------VLIYEMLAGYPPFYD 243 (355)
T ss_pred EEeccceEEecCc--------EEEec------CCccccChHHhhcCCCCcchhHHHHH-------HHHHHHHcCCCCCcC
Confidence 9999999976531 22233 89999999999999999999999999 66666677776 455
Q ss_pred CcCCcccceEe
Q 000316 398 YTFHMVMPWVI 408 (1678)
Q Consensus 398 l~q~pv~pwv~ 408 (1678)
-+...++--|+
T Consensus 244 ~~~~~iY~KI~ 254 (355)
T KOG0616|consen 244 DNPIQIYEKIL 254 (355)
T ss_pred CChHHHHHHHH
Confidence 44455555555
No 35
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-35 Score=343.69 Aligned_cols=174 Identities=18% Similarity=0.161 Sum_probs=140.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|...+.||+|+||.||++.+. .+|...|||.+....... .+.+. +|+.+|++++|||||++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~------~~g~~~AvK~v~~~~~~~---~~~l~-------~Ei~iL~~l~~p~IV~~ 79 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNK------KTGELMAVKSVELEDSPT---SESLE-------REIRILSRLNHPNIVQY 79 (313)
T ss_pred cchhhhhccccCccceEEEEEEec------CCCcceeeeeeecccchh---HHHHH-------HHHHHHHhCCCCCEEee
Confidence 456899999999999999999965 358899999987652221 22232 99999999999999999
Q ss_pred eeEEEeCC--eEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecC-CCcee
Q 000316 241 LGLLKTSG--LITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD-SCWSW 316 (1678)
Q Consensus 241 ~~~~~~~~--~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~-~g~~~ 316 (1678)
+|...... .++|.|||++ |+|.+++..... .+++..++.+.+||++||+|||++|||||||||+|||++. ++ .
T Consensus 80 ~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~--~ 156 (313)
T KOG0198|consen 80 YGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNG--D 156 (313)
T ss_pred CCccccccCeeeEeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCC--e
Confidence 99855544 6999999999 599999995444 7999999999999999999999999999999999999999 67 8
Q ss_pred EEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccc
Q 000316 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 317 lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 361 (1678)
+||+|||+++.......... ......||+.|||||++
T Consensus 157 ~KlaDFG~a~~~~~~~~~~~--------~~~~~~Gtp~~maPEvi 193 (313)
T KOG0198|consen 157 VKLADFGLAKKLESKGTKSD--------SELSVQGTPNYMAPEVI 193 (313)
T ss_pred EEeccCcccccccccccccc--------ccccccCCccccCchhh
Confidence 99999999986542110000 11123578888888775
No 36
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.1e-37 Score=334.70 Aligned_cols=209 Identities=19% Similarity=0.186 Sum_probs=182.4
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
...+|+++++||+|+||+||++.+. .++..+|.|.+.-+..........+ .|+.+|++|+|||||+
T Consensus 17 ~l~~y~Il~~IG~GsFg~vykv~~~------~~g~l~a~K~i~f~~md~k~rq~~v--------~Ei~lLkQL~HpNIVq 82 (375)
T KOG0591|consen 17 TLADYQILKKIGRGSFGEVYKVQCL------LDGKLVALKKIQFGMMDAKARQDCV--------KEISLLKQLNHPNIVQ 82 (375)
T ss_pred cHHHHHHHHHHcCCcchheEEeeec------cCcchhhhhhcchhhccHHHHHHHH--------HHHHHHHhcCCchHHH
Confidence 3568999999999999999999964 6899999999987666666555555 8999999999999999
Q ss_pred eee-EEEeCCe-EEEeccCCC-CCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHh--CC--ceecCCCCCCeEec
Q 000316 240 VLG-LLKTSGL-ITSVIPKTP-YTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHS--LG--IAHRSVCPSNVLLT 310 (1678)
Q Consensus 240 l~~-~~~~~~~-~~lVmEy~~-g~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~--~g--IiHRDLKP~NILl~ 310 (1678)
+|+ .|..+.. ++||||||+ |||..+|+. ...+.++|..++.++.|+|.||.+||+ .. |+||||||.||+|+
T Consensus 83 Yy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~ 162 (375)
T KOG0591|consen 83 YYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLT 162 (375)
T ss_pred HHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEc
Confidence 999 5655554 999999999 799999985 345679999999999999999999999 55 99999999999999
Q ss_pred CCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccc
Q 000316 311 DSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKL 390 (1678)
Q Consensus 311 ~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~ 390 (1678)
.+| .+||.|||++|..... ..+....+|||+||+||++.+.+|+.++|+|+.||+. ||+.+.-.+|
T Consensus 163 ~~g--vvKLGDfGL~r~l~s~-----------~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCll-yEMcaL~~PF 228 (375)
T KOG0591|consen 163 ANG--VVKLGDFGLGRFLSSK-----------TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLL-YEMCALQSPF 228 (375)
T ss_pred CCC--ceeeccchhHhHhcch-----------hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHH-HHHHhcCCCc
Confidence 999 9999999999976521 1134456899999999999999999999999999998 9999999999
Q ss_pred cCCCCC
Q 000316 391 AGRRWG 396 (1678)
Q Consensus 391 aGRs~~ 396 (1678)
.||++-
T Consensus 229 ~g~n~~ 234 (375)
T KOG0591|consen 229 YGDNLL 234 (375)
T ss_pred ccccHH
Confidence 998653
No 37
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-34 Score=335.11 Aligned_cols=190 Identities=19% Similarity=0.159 Sum_probs=141.4
Q ss_pred ccccccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHH---HHhcC-CCchhHHHhhc
Q 000316 155 FSCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNF---LRLIG-VPSFDESSVPG 230 (1678)
Q Consensus 155 ~~~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~---l~~~~-~~~~~Ei~iL~ 230 (1678)
.......++|++++.||+|.||.|-+|++. .+++.||||++.+.+...+..... .++.+ ....+||.||+
T Consensus 90 ~~~~k~lNqy~l~~eiG~G~yGkVkLar~~------~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailK 163 (576)
T KOG0585|consen 90 DQDRKQLNQYELIKEIGSGQYGKVKLARDE------VDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILK 163 (576)
T ss_pred cccceehhheehhhhhcCCccceEEEEeec------CCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHH
Confidence 344556789999999999999999999965 578999999998754332211000 00000 01239999999
Q ss_pred cCCCCcccceeeEEEeC--CeEEEeccCCC-CCHHHHHhhCCCCC-CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCC
Q 000316 231 CLRHPNVAPVLGLLKTS--GLITSVIPKTP-YTLENILQFSPNAL-KSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSN 306 (1678)
Q Consensus 231 ~l~HpNIV~l~~~~~~~--~~~~lVmEy~~-g~L~~~l~~~~~~~-l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~N 306 (1678)
+|+|||||+|+++..+. +.+|||+|||. |.+...= ..+. +++.+++.|++.++.||+|||.+|||||||||+|
T Consensus 164 kl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsN 240 (576)
T KOG0585|consen 164 KLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSN 240 (576)
T ss_pred hcCCcCeeEEEEeecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhh
Confidence 99999999999999875 48999999998 4544332 3444 8999999999999999999999999999999999
Q ss_pred eEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccc
Q 000316 307 VLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 307 ILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 361 (1678)
+||+++| ++||+|||.+-......... .-.+.....|||.|||||++
T Consensus 241 LLl~~~g--~VKIsDFGVs~~~~~~~~~~------~d~~L~~tvGTPAF~APE~c 287 (576)
T KOG0585|consen 241 LLLSSDG--TVKISDFGVSNEFPQGSDEG------SDDQLSRTVGTPAFFAPELC 287 (576)
T ss_pred eEEcCCC--cEEeeccceeeecccCCccc------cHHHHhhcCCCccccchHhh
Confidence 9999999 99999999987542110000 00011123577778887764
No 38
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=2.2e-32 Score=298.53 Aligned_cols=280 Identities=19% Similarity=0.232 Sum_probs=246.0
Q ss_pred cccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCC
Q 000316 1276 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFK 1352 (1678)
Q Consensus 1276 ~~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~D 1352 (1678)
..+|.||.+.|++ +++|++. |+++|.||.+.|||.- +...+.+.--+..|..++|+|.|+.+|+||- |
T Consensus 48 rr~LkGH~~Ki~~~~ws~Dsr~-----ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGL----d 118 (343)
T KOG0286|consen 48 RRTLKGHLNKIYAMDWSTDSRR-----IVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGL----D 118 (343)
T ss_pred EEEecccccceeeeEecCCcCe-----EEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCc----C
Confidence 3689999999997 9999987 9999999999999966 6788888888999999999999999999998 8
Q ss_pred CeEEEEeCCCC------eEEEEEecCCccEEEEeecCCCCcE-EeCCCcEEEEECCCCceeEEecccCccccccCCCCCC
Q 000316 1353 GTVQKWELTRI------NCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSS 1425 (1678)
Q Consensus 1353 gtVrlWDl~tg------~~l~~l~gH~~~V~sV~fs~~~~~l-aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~ 1425 (1678)
+...||++.+. +..+.+.||++.+.++.|..++..+ +|+|.|+.+||+++|+.+..|.+|..
T Consensus 119 N~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD~~ilT~SGD~TCalWDie~g~~~~~f~GH~g----------- 187 (343)
T KOG0286|consen 119 NKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDDNHILTGSGDMTCALWDIETGQQTQVFHGHTG----------- 187 (343)
T ss_pred ceeEEEecccccccccceeeeeecCccceeEEEEEcCCCceEecCCCceEEEEEcccceEEEEecCCcc-----------
Confidence 99999999865 3456789999999999998876666 78899999999999999999987643
Q ss_pred ccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcce
Q 000316 1426 ISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVS 1505 (1678)
Q Consensus 1426 ~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~ 1505 (1678)
.|.++++.|. +++.+++|+.|++.++||+|.+.++++|.+|.. .|+
T Consensus 188 -------------------DV~slsl~p~---------~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghes------DIN 233 (343)
T KOG0286|consen 188 -------------------DVMSLSLSPS---------DGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHES------DIN 233 (343)
T ss_pred -------------------cEEEEecCCC---------CCCeEEecccccceeeeeccCcceeEeeccccc------ccc
Confidence 3444444432 799999999999999999999999999997654 478
Q ss_pred EEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEec--cCCCeEEEE-cCCCCEEEEEeCCCcEEEEEc
Q 000316 1506 AICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA--HDGYVTKLA-APEDHLLVSSSLDKTLRIWDL 1582 (1678)
Q Consensus 1506 sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~g--H~~~V~sva-spdg~~LaSgS~DgtI~IWDl 1582 (1678)
+|+|. |+|.-+++||+|+++|+||+|....+..+.. -..+|++|+ +..|++|.+|..|.++.+||.
T Consensus 234 sv~ff-----------P~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDt 302 (343)
T KOG0286|consen 234 SVRFF-----------PSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDT 302 (343)
T ss_pred eEEEc-----------cCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeec
Confidence 89885 5667899999999999999999999988872 236799999 899999999999999999999
Q ss_pred CCCCCCCCeEeecCCCCEEE--EEecCCEEEEEeCCC-eEEEe
Q 000316 1583 RRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSS 1622 (1678)
Q Consensus 1583 ~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwd 1622 (1678)
-.+ +.+..+.||.+.|.+ ++|||--|+|||.|. ++||.
T Consensus 303 lk~--e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 303 LKG--ERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred ccc--ceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 887 667799999999996 899999999999999 99994
No 39
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2e-33 Score=332.81 Aligned_cols=149 Identities=23% Similarity=0.281 Sum_probs=130.1
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.++||+|+||.||+|++. .++..||+|.++...... ...... +|+.+++.++||||+++
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~-~~~~~~--------~E~~~l~~l~h~niv~~ 68 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSK------LTENLVALKEIRLEHEEG-APCTAI--------REVSLLKNLKHANIVTL 68 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEEC------CCCCEEEEEEecccccCC-cchhHH--------HHHHHHHhCCCCCEeeE
Confidence 678999999999999999999965 467899999986532221 112222 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
++++.+++..++||||++|+|.+++.. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~--~~kl~ 145 (288)
T cd07871 69 HDIIHTERCLTLVFEYLDSDLKQYLDN-CGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKG--ELKLA 145 (288)
T ss_pred EEEEcCCCeEEEEEeCCCcCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC--CEEEC
Confidence 999999999999999999999999873 344578999999999999999999999999999999999999999 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||+++.
T Consensus 146 DfG~~~~ 152 (288)
T cd07871 146 DFGLARA 152 (288)
T ss_pred cCcceee
Confidence 9999874
No 40
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.7e-33 Score=322.90 Aligned_cols=153 Identities=20% Similarity=0.248 Sum_probs=136.8
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||.|.-|+||+|+.+ .++..+|+|++.+...... ++.. ++..|-+||+.++||.++.|
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~------~t~~~fAmKVmdK~~l~~r--kKl~-----Ra~tE~eIL~~lDHPFlPTL 142 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELR------GTNCLFAMKVMDKESLASR--KKLK-----RAQTEREILSLLDHPFLPTL 142 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEec------CCCceEEEEEecHHHHhhh--hHHH-----HHHHHHHHHHhcCCCccchh
Confidence 457999999999999999999965 4568999999987544332 2222 23389999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
|..|+++...|+|||||+| +|..+.+..+.+.+++..+++|+.+++.||+|||-.|||+||||||||||-++| +|.|
T Consensus 143 Ya~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredG--HIML 220 (459)
T KOG0610|consen 143 YASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDG--HIML 220 (459)
T ss_pred hheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCC--cEEe
Confidence 9999999999999999995 999999999999999999999999999999999999999999999999999999 9999
Q ss_pred EecCCcccC
Q 000316 320 CDKPLVGFN 328 (1678)
Q Consensus 320 ~DFGlA~~~ 328 (1678)
+||-|+...
T Consensus 221 sDFDLS~~~ 229 (459)
T KOG0610|consen 221 SDFDLSLRC 229 (459)
T ss_pred eeccccccC
Confidence 999999754
No 41
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.1e-35 Score=318.34 Aligned_cols=176 Identities=19% Similarity=0.205 Sum_probs=146.8
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh--HHHHHHHHhcCCCchhHHHhhccC-CCCcc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG--QESKNFLRLIGVPSFDESSVPGCL-RHPNV 237 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNI 237 (1678)
..+|+..+.||+|..++|.+|.++ +++..+|+|++....... +...+.+. ...+|+.||+++ .||||
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k------~t~~e~a~kii~~~at~~~~e~~~~~~E----aT~~Ev~ILRqv~GHP~I 85 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHK------ETGKEFAVKIIDVTATTESGETPYEMRE----ATRQEISILRQVMGHPYI 85 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhc------ccccceeEEEEEecccccCCccHHHHHH----HHHHHHHHHHHhcCCCcE
Confidence 567899999999999999999865 678889999987532221 11222221 234999999999 69999
Q ss_pred cceeeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCcee
Q 000316 238 APVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1678)
Q Consensus 238 V~l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~ 316 (1678)
+++.++|+++..+++|+|.|+ |.|+|++. ..-.++|.+.+.+|+|++.|+.|||.++||||||||+|||++++. +
T Consensus 86 I~l~D~yes~sF~FlVFdl~prGELFDyLt--s~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~--~ 161 (411)
T KOG0599|consen 86 IDLQDVYESDAFVFLVFDLMPRGELFDYLT--SKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNM--N 161 (411)
T ss_pred EEeeeeccCcchhhhhhhhcccchHHHHhh--hheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeecccc--c
Confidence 999999999999999999999 89999998 567799999999999999999999999999999999999999999 9
Q ss_pred EEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 317 lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
+||+|||+|.......+ -+.-| |||.|.|||.+.
T Consensus 162 i~isDFGFa~~l~~Gek------LrelC------GTPgYLAPEtik 195 (411)
T KOG0599|consen 162 IKISDFGFACQLEPGEK------LRELC------GTPGYLAPETIK 195 (411)
T ss_pred eEEeccceeeccCCchh------HHHhc------CCCcccChhhee
Confidence 99999999997653221 11123 899999999864
No 42
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-33 Score=322.18 Aligned_cols=182 Identities=14% Similarity=0.105 Sum_probs=151.7
Q ss_pred cccccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCC
Q 000316 156 SCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHP 235 (1678)
Q Consensus 156 ~~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~Hp 235 (1678)
.+....++|++...||.|.-++||+|+.. ..+..||||+++.++.... .+.++ +|+..|+.++||
T Consensus 20 ~~p~n~~~YeL~e~IG~G~sa~V~~A~c~------p~~e~VAIK~inLEkc~~~--ld~l~-------kE~~~msl~~HP 84 (516)
T KOG0582|consen 20 EFPLNAKDYELQEVIGVGASAVVYLARCI------PTNEVVAIKIINLEKCNND--LDALR-------KEVQTMSLIDHP 84 (516)
T ss_pred cCCCCccceeEEEEEeccceeEeeeeeec------ccCCEEEEEEeehhhhhhh--HHHHH-------HHHHHhhhcCCC
Confidence 34445779999999999999999999954 6779999999988665543 33443 999999999999
Q ss_pred cccceeeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 236 NVAPVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 236 NIV~l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
||++++..|..+..+|+||+||. |++.++++..-...+.|..|..+++++++||.|||.+|-||||||+.||||+.+|
T Consensus 85 NIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG- 163 (516)
T KOG0582|consen 85 NIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDG- 163 (516)
T ss_pred CcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCC-
Confidence 99999999999999999999999 6999999875555699999999999999999999999999999999999999999
Q ss_pred eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccc
Q 000316 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 315 ~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 361 (1678)
.|||+|||.+....... .+........+||+.|||||++
T Consensus 164 -~VkLadFgvsa~l~~~G-------~R~~~rf~tfvgtp~wmAPEvl 202 (516)
T KOG0582|consen 164 -TVKLADFGVSASLFDSG-------DRQVTRFNTFVGTPCWMAPEVL 202 (516)
T ss_pred -cEEEcCceeeeeecccC-------ceeeEeeccccCcccccChHHh
Confidence 99999999887554311 1111111345678888888874
No 43
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4.3e-33 Score=332.29 Aligned_cols=149 Identities=21% Similarity=0.265 Sum_probs=130.5
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.++||+|+||.||+|+++ .++..||+|++....... ...... +|+.+++.++||||+++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~-~~~~~~--------~E~~~l~~l~h~niv~~ 68 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSK------VNGKLVALKVIRLQEEEG-TPFTAI--------REASLLKGLKHANIVLL 68 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEEC------CCCCEEEEEEeccccccc-cchhHH--------HHHHHHhhCCCCCcCeE
Confidence 578999999999999999999965 467899999987542221 112223 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
++++.++...|+||||++++|.+++.. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~--~~kl~ 145 (303)
T cd07869 69 HDIIHTKETLTLVFEYVHTDLCQYMDK-HPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTG--ELKLA 145 (303)
T ss_pred EEEEecCCeEEEEEECCCcCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEC
Confidence 999999999999999999999998874 345688999999999999999999999999999999999999999 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||+++.
T Consensus 146 Dfg~~~~ 152 (303)
T cd07869 146 DFGLARA 152 (303)
T ss_pred CCCccee
Confidence 9999874
No 44
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-32 Score=293.25 Aligned_cols=283 Identities=19% Similarity=0.297 Sum_probs=228.6
Q ss_pred cccccCCCCceEeecCCCCCCCCCeEEEEeCCCCEEEEeCC------CceeEEeccccccEEEEEEecCCCEEEEEecCC
Q 000316 1276 TSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIK------ASILSSIRAHHGALRSVAVGQDECTVFTAGIGP 1349 (1678)
Q Consensus 1276 ~~~l~gH~~~V~~fSpdg~~~~~~~LasgS~D~~v~lWd~~------~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~ 1349 (1678)
..++.||++||....-.-. +.+.+.++|.|+++.+|++. |..++.++||+..|..++.++||++.+|||.
T Consensus 8 ~~tl~gh~d~Vt~la~~~~--~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~sw-- 83 (315)
T KOG0279|consen 8 RGTLEGHTDWVTALAIKIK--NSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASW-- 83 (315)
T ss_pred eeeecCCCceEEEEEeecC--CCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccc--
Confidence 4578999999997332211 23559999999999999986 5678999999999999999999999999996
Q ss_pred CCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcEE--eCCCcEEEEECCCCceeEEecccCccccccCCCCCCcc
Q 000316 1350 GFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIA--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSIS 1427 (1678)
Q Consensus 1350 ~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~la--S~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~ 1427 (1678)
|+++|+||+.+|+..+.|.||...|.+|+|++++.+++ |.|+||++||+. |.|.-+.....
T Consensus 84 --D~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~-g~ck~t~~~~~-------------- 146 (315)
T KOG0279|consen 84 --DGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTL-GVCKYTIHEDS-------------- 146 (315)
T ss_pred --cceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeec-ccEEEEEecCC--------------
Confidence 99999999999999999999999999999999999984 559999999986 55554444321
Q ss_pred ccccccccccccCCCCCCeEEeeecCCceeEeEeecC--CCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcce
Q 000316 1428 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIEC--VERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVS 1505 (1678)
Q Consensus 1428 ~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~--g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~ 1505 (1678)
+.++ |+|+.|+|+ ...+++++.|++||+||+++.+..+.+.+| ...++
T Consensus 147 --------------~~~W----------VscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh------~~~v~ 196 (315)
T KOG0279|consen 147 --------------HREW----------VSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGH------SGYVN 196 (315)
T ss_pred --------------CcCc----------EEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccc------cccEE
Confidence 1233 555555555 678999999999999999998888777754 55678
Q ss_pred EEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCC
Q 000316 1506 AICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRR 1584 (1678)
Q Consensus 1506 sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~ 1584 (1678)
.++++ |||.++++|+.||.+.+||++.++.+.++. |...|++++ +|+. +.+.+..+..|+|||+.+
T Consensus 197 t~~vS-----------pDGslcasGgkdg~~~LwdL~~~k~lysl~-a~~~v~sl~fspnr-ywL~~at~~sIkIwdl~~ 263 (315)
T KOG0279|consen 197 TVTVS-----------PDGSLCASGGKDGEAMLWDLNEGKNLYSLE-AFDIVNSLCFSPNR-YWLCAATATSIKIWDLES 263 (315)
T ss_pred EEEEC-----------CCCCEEecCCCCceEEEEEccCCceeEecc-CCCeEeeEEecCCc-eeEeeccCCceEEEeccc
Confidence 88875 677899999999999999999999988887 788999999 7775 455555677899999998
Q ss_pred CCCCCCeEee----cC---CCCEE----EEEecCCEEEEEeCCC-eEEEecC
Q 000316 1585 NWPSQPTVFK----GH---TNGIS----GFSVWGQDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1585 ~~~~~~~~l~----gH---~~~V~----afSpdg~~LaSgs~D~-I~vwdl~ 1624 (1678)
. ..+.+++ |. .+.+. +||.||+.|.+|-.|+ |++|.+.
T Consensus 264 ~--~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 264 K--AVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred h--hhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence 7 3343332 22 11222 5999999999998888 9999874
No 45
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-33 Score=337.20 Aligned_cols=170 Identities=16% Similarity=0.130 Sum_probs=145.2
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
....|....+||+|+.|.||.|+.. .++..||||.+...+... ++.+ ++|+.+|+..+|+|||+
T Consensus 271 P~~~y~~~~kigqgaSG~vy~A~~~------~~~~~VaiK~m~l~~Q~~---keLi-------lnEi~Vm~~~~H~NiVn 334 (550)
T KOG0578|consen 271 PRSKYTDFKKIGQGATGGVYVARKI------STKQEVAIKRMDLRKQPK---KELL-------LNEILVMRDLHHPNIVN 334 (550)
T ss_pred hhhhhcchhhhccccccceeeeeec------cCCceEEEEEEEeccCCc---hhhh-------HHHHHHHHhccchHHHH
Confidence 3457999999999999999999954 577889999998754433 3333 49999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
+++.|..++.+++|||||+| +|.+++. ...++|.++..+++++++||+|||.+||+|||||.+|||++.+| .+|
T Consensus 335 fl~Sylv~deLWVVMEym~ggsLTDvVt---~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g--~vK 409 (550)
T KOG0578|consen 335 FLDSYLVGDELWVVMEYMEGGSLTDVVT---KTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDG--SVK 409 (550)
T ss_pred HHHHhcccceeEEEEeecCCCchhhhhh---cccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCC--cEE
Confidence 99999999999999999995 9999997 44589999999999999999999999999999999999999999 899
Q ss_pred EEecCCcccCCCCCcccccCCCCcceeecccccCccccccccc
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 361 (1678)
|+|||++........ . ....+|||+|||||++
T Consensus 410 ltDFGFcaqi~~~~~------K-----R~TmVGTPYWMAPEVv 441 (550)
T KOG0578|consen 410 LTDFGFCAQISEEQS------K-----RSTMVGTPYWMAPEVV 441 (550)
T ss_pred EeeeeeeeccccccC------c-----cccccCCCCccchhhh
Confidence 999999986542211 1 1224699999999985
No 46
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=1.3e-31 Score=292.43 Aligned_cols=282 Identities=19% Similarity=0.280 Sum_probs=235.7
Q ss_pred eEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcEEeC--CCcEEE
Q 000316 1320 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHV 1397 (1678)
Q Consensus 1320 l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~laS~--DgtVrI 1397 (1678)
.++|+||.+.|.++.|++|.++|+|+|. ||.+.|||.-|......++--..+|-.++|+|.+..+|++ |+...|
T Consensus 48 rr~LkGH~~Ki~~~~ws~Dsr~ivSaSq----DGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csi 123 (343)
T KOG0286|consen 48 RRTLKGHLNKIYAMDWSTDSRRIVSASQ----DGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSI 123 (343)
T ss_pred EEEecccccceeeeEecCCcCeEEeecc----CCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEE
Confidence 4889999999999999999999999998 9999999999998888888889999999999999999665 999999
Q ss_pred EECCCCc------eeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEE
Q 000316 1398 WNSQTGK------LLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVG 1471 (1678)
Q Consensus 1398 WD~~tg~------~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasg 1471 (1678)
|++.+.. ..+.+. +|.+. ++|..|.+ ...|+++
T Consensus 124 y~ls~~d~~g~~~v~r~l~------------------------------gHtgy----------lScC~f~d-D~~ilT~ 162 (343)
T KOG0286|consen 124 YPLSTRDAEGNVRVSRELA------------------------------GHTGY----------LSCCRFLD-DNHILTG 162 (343)
T ss_pred Eecccccccccceeeeeec------------------------------Cccce----------eEEEEEcC-CCceEec
Confidence 9998542 112222 23333 44444444 5689999
Q ss_pred ECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEe
Q 000316 1472 IGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR 1551 (1678)
Q Consensus 1472 s~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~ 1551 (1678)
|.|.+.-+||+++|+.+..|.+|.+ .|.++++.|+ +++++++|+.|++.++||+|.+.++++|.
T Consensus 163 SGD~TCalWDie~g~~~~~f~GH~g------DV~slsl~p~----------~~ntFvSg~cD~~aklWD~R~~~c~qtF~ 226 (343)
T KOG0286|consen 163 SGDMTCALWDIETGQQTQVFHGHTG------DVMSLSLSPS----------DGNTFVSGGCDKSAKLWDVRSGQCVQTFE 226 (343)
T ss_pred CCCceEEEEEcccceEEEEecCCcc------cEEEEecCCC----------CCCeEEecccccceeeeeccCcceeEeec
Confidence 9999999999999999999997655 4677777542 56899999999999999999999999999
Q ss_pred ccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEee--cCCCCEE--EEEecCCEEEEEeCCC-eEEEecCC
Q 000316 1552 AHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFK--GHTNGIS--GFSVWGQDVISISNNK-IGLSSLSK 1625 (1678)
Q Consensus 1552 gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~--gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~ 1625 (1678)
||+..|++|. +|+|.-++|||.|++.++||++.. ..+..+. .-..+|+ +||..|++|.+|..|. +.|||.-.
T Consensus 227 ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD--~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk 304 (343)
T KOG0286|consen 227 GHESDINSVRFFPSGDAFATGSDDATCRLYDLRAD--QELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLK 304 (343)
T ss_pred ccccccceEEEccCCCeeeecCCCceeEEEeecCC--cEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeeccc
Confidence 9999999999 999999999999999999999997 3444443 2233566 4999999999998888 99999641
Q ss_pred CCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1626 SADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1626 ~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
+. .... .. +|.+.|+++..+|||..++|||+|.+||||.
T Consensus 305 -----~e---~vg~----L~--GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 305 -----GE---RVGV----LA--GHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred -----cc---eEEE----ee--ccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 11 1122 22 4999999999999999999999999999994
No 47
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4e-35 Score=314.57 Aligned_cols=155 Identities=19% Similarity=0.190 Sum_probs=133.4
Q ss_pred ccccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCc
Q 000316 157 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 236 (1678)
Q Consensus 157 ~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpN 236 (1678)
++.....|+.+.+||+|.||+||+|+.+ .+++.||+|++....... -+++++++|+++|..|+|+|
T Consensus 12 ~~~~~~~yek~~kigqGtfgeVFkAr~~------n~~kkvalkkvlmeneKe--------GfpitalreikiL~~lkHen 77 (376)
T KOG0669|consen 12 FCDEVSKYEKLAKIGQGTFGEVFKARSK------NTGKKVALKKVLMENEKE--------GFPITALREIKILQLLKHEN 77 (376)
T ss_pred ceecchHHHHHHhcCCchHHHHHHHhhc------CccchhHHHHHHHhcccc--------CCcHHHHHHHHHHHHhcchh
Confidence 4455678999999999999999999965 467778998865422221 25778889999999999999
Q ss_pred ccceeeEEEeC--------CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeE
Q 000316 237 VAPVLGLLKTS--------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVL 308 (1678)
Q Consensus 237 IV~l~~~~~~~--------~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NIL 308 (1678)
++.+++++.+. ..+|+||.+|+.||..++. +....++..+++.++.+++.||.|+|++.|+|||+||+|+|
T Consensus 78 v~nliEic~tk~Tp~~r~r~t~ylVf~~cehDLaGlLs-n~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvL 156 (376)
T KOG0669|consen 78 VVNLIEICRTKATPTNRDRATFYLVFDFCEHDLAGLLS-NRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVL 156 (376)
T ss_pred HHHHHHHHhhccCCcccccceeeeeHHHhhhhHHHHhc-CccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEE
Confidence 99998887543 2699999999999999998 45677999999999999999999999999999999999999
Q ss_pred ecCCCceeEEEEecCCcccC
Q 000316 309 LTDSCWSWLYICDKPLVGFN 328 (1678)
Q Consensus 309 l~~~g~~~lKL~DFGlA~~~ 328 (1678)
|+.+| .+||+|||+||..
T Consensus 157 It~dg--ilklADFGlar~f 174 (376)
T KOG0669|consen 157 ITKDG--ILKLADFGLARAF 174 (376)
T ss_pred EcCCc--eEEeeccccccce
Confidence 99999 9999999999843
No 48
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.3e-32 Score=332.84 Aligned_cols=147 Identities=23% Similarity=0.345 Sum_probs=127.4
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.++||+|+||.||+|+++ .++..||+|.+...........++. +|+.+|+.++||||+++++
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~hpniv~~~~ 66 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDT------HTGEKVAIKKINDVFEHVSDATRIL--------REIKLLRLLRHPDIVEIKH 66 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEEC------CCCCEEEEEEechhhccchhHHHHH--------HHHHHHHhCCCCCEeeecc
Confidence 5999999999999999999965 5688999999875322222333344 8999999999999999999
Q ss_pred EEEeCC-----eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 243 LLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 243 ~~~~~~-----~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++...+ .+|+|||||+++|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~--~~ 142 (338)
T cd07859 67 IMLPPSRREFKDIYVVFELMESDLHQVIK--ANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADC--KL 142 (338)
T ss_pred eEeccCCCCCceEEEEEecCCCCHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--cE
Confidence 986433 589999999999999998 455689999999999999999999999999999999999999999 89
Q ss_pred EEEecCCccc
Q 000316 318 YICDKPLVGF 327 (1678)
Q Consensus 318 KL~DFGlA~~ 327 (1678)
||+|||+++.
T Consensus 143 kL~Dfg~~~~ 152 (338)
T cd07859 143 KICDFGLARV 152 (338)
T ss_pred EEccCccccc
Confidence 9999999974
No 49
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=8.7e-33 Score=327.87 Aligned_cols=150 Identities=17% Similarity=0.177 Sum_probs=129.9
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++.+.||+|+||.||+|.++ .++..||+|.+...........+.+. +|+.+|+.++||||++++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~E~~~l~~l~hp~iv~~~ 67 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDR------ISEHYYALKVMAIPEVIRLKQEQHVH-------NEKRVLKEVSHPFIIRLF 67 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEc------CCCCEEEEEEEEHHHHhhhHHHHHHH-------HHHHHHHhCCCCcHhhhH
Confidence 47999999999999999999965 46889999998653222222222222 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++.+++.+|+||||+++ +|.+++. ..+.+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~--~~kl~ 143 (291)
T cd05612 68 WTEHDQRFLYMLMEYVPGGELFSYLR--NSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEG--HIKLT 143 (291)
T ss_pred hhhccCCeEEEEEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC--CEEEE
Confidence 999999999999999985 9999998 455789999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccC
Q 000316 321 DKPLVGFN 328 (1678)
Q Consensus 321 DFGlA~~~ 328 (1678)
|||+++..
T Consensus 144 Dfg~~~~~ 151 (291)
T cd05612 144 DFGFAKKL 151 (291)
T ss_pred ecCcchhc
Confidence 99998743
No 50
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-31 Score=288.66 Aligned_cols=293 Identities=18% Similarity=0.235 Sum_probs=238.1
Q ss_pred eeEEeccccccEEEEEEecCC-CEEEEEecCCCCCCeEEEEeCC-----CCeEEEEEecCCccEEEEeecCCCCcE--Ee
Q 000316 1319 ILSSIRAHHGALRSVAVGQDE-CTVFTAGIGPGFKGTVQKWELT-----RINCVSGYYGHEEVVNDICVLSSSGRI--AS 1390 (1678)
Q Consensus 1319 ~l~tl~gH~~~V~svafspdg-~~LaSgS~d~~~DgtVrlWDl~-----tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS 1390 (1678)
+..+++||++.|+.++..+.+ +.+++++. |+++.+|++. .|..++.++||+..|..+..++++.+. +|
T Consensus 7 l~~tl~gh~d~Vt~la~~~~~~~~l~sasr----Dk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~s 82 (315)
T KOG0279|consen 7 LRGTLEGHTDWVTALAIKIKNSDILVSASR----DKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSAS 82 (315)
T ss_pred eeeeecCCCceEEEEEeecCCCceEEEccc----ceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEecc
Confidence 457899999999999999874 68888887 9999999874 577889999999999999999999987 67
Q ss_pred CCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEE
Q 000316 1391 CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVV 1470 (1678)
Q Consensus 1391 ~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Las 1470 (1678)
.|+++|+||+.+|+..+.|.+|... |.++++++|+.++++
T Consensus 83 wD~~lrlWDl~~g~~t~~f~GH~~d----------------------------------------Vlsva~s~dn~qivS 122 (315)
T KOG0279|consen 83 WDGTLRLWDLATGESTRRFVGHTKD----------------------------------------VLSVAFSTDNRQIVS 122 (315)
T ss_pred ccceEEEEEecCCcEEEEEEecCCc----------------------------------------eEEEEecCCCceeec
Confidence 7999999999999999999877432 667777788999999
Q ss_pred EECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEE
Q 000316 1471 GIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASW 1550 (1678)
Q Consensus 1471 gs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l 1550 (1678)
|+.|++|++||+.. .+..+.... ....+|.|++|+|+. +..+|++++.|++|++||+++.+....+
T Consensus 123 GSrDkTiklwnt~g-~ck~t~~~~----~~~~WVscvrfsP~~---------~~p~Ivs~s~DktvKvWnl~~~~l~~~~ 188 (315)
T KOG0279|consen 123 GSRDKTIKLWNTLG-VCKYTIHED----SHREWVSCVRFSPNE---------SNPIIVSASWDKTVKVWNLRNCQLRTTF 188 (315)
T ss_pred CCCcceeeeeeecc-cEEEEEecC----CCcCcEEEEEEcCCC---------CCcEEEEccCCceEEEEccCCcchhhcc
Confidence 99999999999864 444444332 126789999998754 2368999999999999999999999999
Q ss_pred eccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE--EEEecCCEEEEEeCCCeEEEecCCCC
Q 000316 1551 RAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNKIGLSSLSKSA 1627 (1678)
Q Consensus 1551 ~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~I~vwdl~~~~ 1627 (1678)
.||.+.|+.++ +|||.+++||+.||.+.+||++.+ +.++.+ +|...|+ +|+|+.-.|+.+.+..|+|||+....
T Consensus 189 ~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~--k~lysl-~a~~~v~sl~fspnrywL~~at~~sIkIwdl~~~~ 265 (315)
T KOG0279|consen 189 IGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEG--KNLYSL-EAFDIVNSLCFSPNRYWLCAATATSIKIWDLESKA 265 (315)
T ss_pred ccccccEEEEEECCCCCEEecCCCCceEEEEEccCC--ceeEec-cCCCeEeeEEecCCceeEeeccCCceEEEeccchh
Confidence 99999999999 999999999999999999999998 555554 5778888 49999888888887789999986221
Q ss_pred CCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1628 DEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1628 ~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
-.+... .+.... ......-...+++|++||..|..|-.||.|++|
T Consensus 266 ~v~~l~----~d~~g~-s~~~~~~~clslaws~dG~tLf~g~td~~irv~ 310 (315)
T KOG0279|consen 266 VVEELK----LDGIGP-SSKAGDPICLSLAWSADGQTLFAGYTDNVIRVW 310 (315)
T ss_pred hhhhcc----cccccc-ccccCCcEEEEEEEcCCCcEEEeeecCCcEEEE
Confidence 110000 000000 001122345789999999999999999999998
No 51
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.5e-32 Score=331.79 Aligned_cols=151 Identities=16% Similarity=0.127 Sum_probs=131.7
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH-HHHHHHhcCCCchhHHHhhccCCCCccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~l~~~~~~~~~Ei~iL~~l~HpNIV 238 (1678)
..++|++.+.||+|+||.||+|+++ .++..||+|.+.+....... ...+. +|+.+|+.++||||+
T Consensus 16 ~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~hp~iv 81 (329)
T PTZ00263 16 KLSDFEMGETLGTGSFGRVRIAKHK------GTGEYYAIKCLKKREILKMKQVQHVA--------QEKSILMELSHPFIV 81 (329)
T ss_pred CchheEEEEEEEecCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhhHHHHH--------HHHHHHHhCCCCCCC
Confidence 3678999999999999999999965 46789999998754322222 22233 899999999999999
Q ss_pred ceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 239 ~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++++++.+++.+|+||||++| +|.+++. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+
T Consensus 82 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~--~~ 157 (329)
T PTZ00263 82 NMMCSFQDENRVYFLLEFVVGGELFTHLR--KAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKG--HV 157 (329)
T ss_pred cEEEEEEcCCEEEEEEcCCCCChHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCC--CE
Confidence 999999999999999999985 9999998 456789999999999999999999999999999999999999999 89
Q ss_pred EEEecCCcccC
Q 000316 318 YICDKPLVGFN 328 (1678)
Q Consensus 318 KL~DFGlA~~~ 328 (1678)
||+|||+++..
T Consensus 158 kl~Dfg~~~~~ 168 (329)
T PTZ00263 158 KVTDFGFAKKV 168 (329)
T ss_pred EEeeccCceEc
Confidence 99999999743
No 52
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=2.1e-32 Score=306.25 Aligned_cols=288 Identities=18% Similarity=0.274 Sum_probs=251.5
Q ss_pred ccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCC
Q 000316 1277 SNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKG 1353 (1678)
Q Consensus 1277 ~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~Dg 1353 (1678)
+.+.||...|+. |.|+-.. ++++|.|.++++||.. |++...++||.++|.+|+|+..|++++++|. |-
T Consensus 102 ~~l~g~r~~vt~v~~hp~~~~-----v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSs----Dl 172 (406)
T KOG0295|consen 102 QKLAGHRSSVTRVIFHPSEAL-----VVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSS----DL 172 (406)
T ss_pred hhhhccccceeeeeeccCceE-----EEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCC----cc
Confidence 445667777876 7777665 8999999999999988 8899999999999999999999999999998 78
Q ss_pred eEEEEeCCC-CeEEEEEecCCccEEEEeecCCCCcEEeC--CCcEEEEECCCCceeEEecccCccccccCCCCCCccccc
Q 000316 1354 TVQKWELTR-INCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKIN 1430 (1678)
Q Consensus 1354 tVrlWDl~t-g~~l~~l~gH~~~V~sV~fs~~~~~laS~--DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~ 1430 (1678)
.+++||..+ -+|++.+.||+..|.+|+|.|.+.++.|| |.+|+.||+.+|-++.++.+|+
T Consensus 173 ~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~----------------- 235 (406)
T KOG0295|consen 173 SAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHS----------------- 235 (406)
T ss_pred chhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCch-----------------
Confidence 899999987 57888899999999999999999999666 9999999999999999998763
Q ss_pred cccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEee
Q 000316 1431 TDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICAC 1510 (1678)
Q Consensus 1431 ~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~ 1510 (1678)
..|..++++.||..+++++.|.+|++|-+.++++...++.|.. .|.|++|.
T Consensus 236 -----------------------ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh------~vEci~wa 286 (406)
T KOG0295|consen 236 -----------------------EWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEH------PVECIAWA 286 (406)
T ss_pred -----------------------HhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhcccc------ceEEEEec
Confidence 1366777778899999999999999999999988888886643 47888887
Q ss_pred CCCccccCcccC-----CCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCC
Q 000316 1511 GSEKMQAGGAVA-----SPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRR 1584 (1678)
Q Consensus 1511 ~~~~~s~dg~~p-----~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~ 1584 (1678)
+.... ++-.-. .+.++++|+.|++|++||+.+|.++.++.||..+|..++ +|.|++|+|+..|++++|||+++
T Consensus 287 p~~~~-~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~ 365 (406)
T KOG0295|consen 287 PESSY-PSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKN 365 (406)
T ss_pred ccccC-cchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEecc
Confidence 65542 222112 346999999999999999999999999999999999999 99999999999999999999999
Q ss_pred CCCCCCeEeecCCCCEEE--EEecCCEEEEEeCCC-eEEEe
Q 000316 1585 NWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSS 1622 (1678)
Q Consensus 1585 ~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwd 1622 (1678)
. +++.++..|..-|++ |..+..+++||+-|. +++|.
T Consensus 366 ~--~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 366 L--QCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred c--eeeeccCCCcceeEEEecCCCCceEEeccccceeeeee
Confidence 8 778889999998885 666778999999998 99996
No 53
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-32 Score=331.98 Aligned_cols=175 Identities=19% Similarity=0.196 Sum_probs=147.3
Q ss_pred ccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-CCcc
Q 000316 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNV 237 (1678)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-HpNI 237 (1678)
.....|++.+.||+|.||.||+|+++ .+|..+|+|.+.+.........+.++ +|+.+|+++. ||||
T Consensus 32 ~~~~~Y~l~~~lG~G~Fg~v~~~~~~------~tg~~~A~K~i~k~~~~~~~~~~~v~-------~Ev~il~~l~~hpni 98 (382)
T KOG0032|consen 32 DIKEKYELGRELGRGQFGVVYLCREK------STGKEVACKVIPKRKLRGKEDREDVR-------REVAILQQLSGHPNI 98 (382)
T ss_pred cccccEEehhhhCCCCceEEEEEEec------CCCceeEEEEeehhhccccccHHHHH-------HHHHHHHhccCCCCE
Confidence 34568999999999999999999975 46899999999886655443333443 9999999998 9999
Q ss_pred cceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc--
Q 000316 238 APVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-- 314 (1678)
Q Consensus 238 V~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~-- 314 (1678)
|.++++|++.+.+++|||+|.| +|++.|... .+++.++..++.|++.|+.|||+.||+||||||||+|+.....
T Consensus 99 v~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~ 175 (382)
T KOG0032|consen 99 VQLKDAFEDPDSVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGS 175 (382)
T ss_pred EEEEEEEEcCCeEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCC
Confidence 9999999999999999999995 999999854 3999999999999999999999999999999999999986532
Q ss_pred eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccc
Q 000316 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 315 ~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 361 (1678)
..+|++|||+|+.... . .......||+.|+|||++
T Consensus 176 ~~ik~~DFGla~~~~~-~-----------~~~~~~~Gtp~y~APEvl 210 (382)
T KOG0032|consen 176 GRIKLIDFGLAKFIKP-G-----------ERLHTIVGTPEYVAPEVL 210 (382)
T ss_pred CcEEEeeCCCceEccC-C-----------ceEeeecCCccccCchhh
Confidence 3799999999997653 1 112233488999999885
No 54
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.6e-32 Score=330.65 Aligned_cols=142 Identities=21% Similarity=0.198 Sum_probs=124.2
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH-HHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEe
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~ 246 (1678)
+.||+|+||.||+|+++ .++..||+|++.+...... ....++ +|+.+|+.++||||+++++++..
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~hp~i~~~~~~~~~ 66 (323)
T cd05571 1 KLLGKGTFGKVILVREK------ATGKYYAMKILKKEVIIAKDEVAHTL--------TESRVLQNTRHPFLTALKYSFQT 66 (323)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhHHHHHHH--------HHHHHHHhCCCCCCCCEEEEEEc
Confidence 46999999999999965 5788999999975432222 222333 89999999999999999999999
Q ss_pred CCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCc
Q 000316 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1678)
Q Consensus 247 ~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA 325 (1678)
.+.+|+||||++| +|.+++. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||++
T Consensus 67 ~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~--~~kl~DfG~a 142 (323)
T cd05571 67 HDRLCFVMEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDG--HIKITDFGLC 142 (323)
T ss_pred CCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC--CEEEeeCCCC
Confidence 9999999999995 9999987 456789999999999999999999999999999999999999999 8999999998
Q ss_pred cc
Q 000316 326 GF 327 (1678)
Q Consensus 326 ~~ 327 (1678)
+.
T Consensus 143 ~~ 144 (323)
T cd05571 143 KE 144 (323)
T ss_pred cc
Confidence 74
No 55
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.9e-32 Score=343.15 Aligned_cols=147 Identities=21% Similarity=0.245 Sum_probs=124.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++++.||+|+||.||+|.+. .++..||||++..... ... +|+.+|+.++|||||++
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~------~~~~~vAiK~i~~~~~-------~~~-------~Ei~il~~l~h~niv~l 124 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICI------DTSEKVAIKKVLQDPQ-------YKN-------RELLIMKNLNHINIIFL 124 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEEC------CCCCEEEEEEEecCcc-------hHH-------HHHHHHHhcCCCCCcce
Confidence 457999999999999999999964 4678999999864321 111 79999999999999999
Q ss_pred eeEEEeC--------CeEEEeccCCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEec
Q 000316 241 LGLLKTS--------GLITSVIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 310 (1678)
Q Consensus 241 ~~~~~~~--------~~~~lVmEy~~g~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~ 310 (1678)
+++|... ..+++||||++++|.+++.. .....+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 125 ~~~~~~~~~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~ 204 (440)
T PTZ00036 125 KDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLID 204 (440)
T ss_pred eeeEeecccccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEc
Confidence 9987542 25779999999999888763 2456789999999999999999999999999999999999999
Q ss_pred CCCceeEEEEecCCcccC
Q 000316 311 DSCWSWLYICDKPLVGFN 328 (1678)
Q Consensus 311 ~~g~~~lKL~DFGlA~~~ 328 (1678)
.++ ..+||+|||+|+..
T Consensus 205 ~~~-~~vkL~DFGla~~~ 221 (440)
T PTZ00036 205 PNT-HTLKLCDFGSAKNL 221 (440)
T ss_pred CCC-Cceeeeccccchhc
Confidence 665 16999999999853
No 56
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-33 Score=321.31 Aligned_cols=178 Identities=13% Similarity=0.141 Sum_probs=147.8
Q ss_pred ccccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCc
Q 000316 157 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 236 (1678)
Q Consensus 157 ~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpN 236 (1678)
.-++.+-|.+.+.||+|-|++|-+|++. -+|..||||++.+.+.........+ +|++.|+.++|||
T Consensus 13 DgkIAGLYDLekTlG~GHFAVVKLArHV------FTGekVAVKviDKTKlD~~st~hlf--------qEVRCMKLVQHpN 78 (864)
T KOG4717|consen 13 DGKIAGLYDLEKTLGRGHFAVVKLARHV------FTGEKVAVKVIDKTKLDTLSTGHLF--------QEVRCMKLVQHPN 78 (864)
T ss_pred ccceeeeehhhhhhcCCceehhhhhhhh------cccceeEEEEecccccchhhhhHHH--------HHHHHHHHhcCcC
Confidence 3445667999999999999999999976 4889999999999887766555554 8999999999999
Q ss_pred ccceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCce
Q 000316 237 VAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1678)
Q Consensus 237 IV~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~ 315 (1678)
||+||++..+...+|||+|+-+| +|+++|.+. ...+.|..++.|+.||+.|+.|||+..||||||||||+.+-+.. +
T Consensus 79 iVRLYEViDTQTKlyLiLELGD~GDl~DyImKH-e~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKl-G 156 (864)
T KOG4717|consen 79 IVRLYEVIDTQTKLYLILELGDGGDLFDYIMKH-EEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKL-G 156 (864)
T ss_pred eeeeeehhcccceEEEEEEecCCchHHHHHHhh-hccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeec-C
Confidence 99999999999999999999985 999999854 45589999999999999999999999999999999998776543 2
Q ss_pred eEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 316 ~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
-+||+|||++....... ...+.| |+..|.|||++.
T Consensus 157 lVKLTDFGFSNkf~PG~------kL~TsC------GSLAYSAPEILL 191 (864)
T KOG4717|consen 157 LVKLTDFGFSNKFQPGK------KLTTSC------GSLAYSAPEILL 191 (864)
T ss_pred ceEeeeccccccCCCcc------hhhccc------chhhccCchhhh
Confidence 89999999987544211 112222 567788887754
No 57
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.8e-32 Score=321.03 Aligned_cols=149 Identities=18% Similarity=0.262 Sum_probs=128.6
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++.+.||+|+||.||+|+++ .++..+|+|++............+. +|+.+++.++||||++++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~~~ 66 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHK------ETKEIVAIKKFKDSEENEEVKETTL--------RELKMLRTLKQENIVELK 66 (287)
T ss_pred CCceEEEEecccCCEEEEEEEEC------CCCcEEEEEEEecccccccchhhHH--------HHHHHHHhCCCccccchh
Confidence 36999999999999999999975 4678999999876433332223333 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 242 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
+++..++.+|+||||+++++.+.+.. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~--~~kl~D 143 (287)
T cd07848 67 EAFRRRGKLYLVFEYVEKNMLELLEE-MPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHND--VLKLCD 143 (287)
T ss_pred hhEecCCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--cEEEee
Confidence 99999999999999999866665553 345689999999999999999999999999999999999999999 899999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+++.
T Consensus 144 fg~~~~ 149 (287)
T cd07848 144 FGFARN 149 (287)
T ss_pred ccCccc
Confidence 999874
No 58
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=8.5e-32 Score=323.17 Aligned_cols=360 Identities=22% Similarity=0.275 Sum_probs=263.8
Q ss_pred CCCceE--eecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCC--EEEEEecCCCCCCeEE
Q 000316 1282 CEPWFW--FPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDEC--TVFTAGIGPGFKGTVQ 1356 (1678)
Q Consensus 1282 H~~~V~--~fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~--~LaSgS~d~~~DgtVr 1356 (1678)
|++.|. +|+|.|.+ +++|+.|+.+++||+. +.+.+.|+||.|.|.++.|+|+.. .|++|+. |++|+
T Consensus 104 He~Pvi~ma~~~~g~L-----lAtggaD~~v~VWdi~~~~~th~fkG~gGvVssl~F~~~~~~~lL~sg~~----D~~v~ 174 (775)
T KOG0319|consen 104 HEAPVITMAFDPTGTL-----LATGGADGRVKVWDIKNGYCTHSFKGHGGVVSSLLFHPHWNRWLLASGAT----DGTVR 174 (775)
T ss_pred cCCCeEEEEEcCCCce-----EEeccccceEEEEEeeCCEEEEEecCCCceEEEEEeCCccchhheeecCC----CceEE
Confidence 787776 49998876 9999999999999999 779999999999999999999875 4788876 99999
Q ss_pred EEeCCCC-eEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCcc------------------
Q 000316 1357 KWELTRI-NCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMD------------------ 1415 (1678)
Q Consensus 1357 lWDl~tg-~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~------------------ 1415 (1678)
+||+.+. .|+.++.+|...|++++|.+++..+ ++.|+.+.+||+.+-++.+++..-...
T Consensus 175 vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~ 254 (775)
T KOG0319|consen 175 VWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYII 254 (775)
T ss_pred EEEcccCchHHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEE
Confidence 9999854 4588889999999999999997776 555999999998755443333210000
Q ss_pred -------ccc-----------cCCC-C-----------CCcc-cccccc-cccc---------ccCCCCCCeEEeeecC-
Q 000316 1416 -------SLH-----------GGSP-S-----------SSIS-KINTDQ-VGML---------NSNTLSSGILSTAFDG- 1453 (1678)
Q Consensus 1416 -------~~~-----------~~s~-s-----------~~~~-~~~~~~-~~~~---------~~~~~s~~v~sv~f~~- 1453 (1678)
... ...+ + .... .+...+ .-++ ...+...+|..+.|-+
T Consensus 255 TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~ 334 (775)
T KOG0319|consen 255 TAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGP 334 (775)
T ss_pred EecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCC
Confidence 000 0000 0 0000 000000 0000 0112233343333322
Q ss_pred -------------------------------CceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCC
Q 000316 1454 -------------------------------NLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPS 1502 (1678)
Q Consensus 1454 -------------------------------~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~ 1502 (1678)
..+.+++...+|-.+++|+.|+++++|.++.+........ ...+|..
T Consensus 335 e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a--~~~gH~~ 412 (775)
T KOG0319|consen 335 EESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVA--QANGHTN 412 (775)
T ss_pred ccceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhh--hhccccc
Confidence 2245556556778999999999999998854432211111 1124677
Q ss_pred cceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCc-----EE----EEEeccCCCeEEEE-cCCCCEEEEEe
Q 000316 1503 LVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN-----VI----ASWRAHDGYVTKLA-APEDHLLVSSS 1572 (1678)
Q Consensus 1503 ~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~-----~i----~~l~gH~~~V~sva-spdg~~LaSgS 1572 (1678)
.|.+|+++... ..+++++|.|+++++|++...+ .+ .+-..|+..|++|+ +|+++++||||
T Consensus 413 svgava~~~~~----------asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~S 482 (775)
T KOG0319|consen 413 SVGAVAGSKLG----------ASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGS 482 (775)
T ss_pred ccceeeecccC----------ccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecc
Confidence 78899885322 2699999999999999997622 11 13348999999999 99999999999
Q ss_pred CCCcEEEEEcCCCCCCCCeEeecCCCCEEE--EEecCCEEEEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCCCc
Q 000316 1573 LDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKN 1649 (1678)
Q Consensus 1573 ~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h 1649 (1678)
.|++.+||++... ....++.||+.+|++ |++..+.++|+|.|+ |++|.++. ++..+.++ +|
T Consensus 483 qDktaKiW~le~~--~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~---------fSClkT~e-----GH 546 (775)
T KOG0319|consen 483 QDKTAKIWDLEQL--RLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSIST---------FSCLKTFE-----GH 546 (775)
T ss_pred cccceeeecccCc--eEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEecc---------ceeeeeec-----Cc
Confidence 9999999999966 677899999999996 999999999999999 99999861 12233332 59
Q ss_pred cCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1650 LSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1650 ~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
...|..++|-.+++.|++|+.||.|++|+
T Consensus 547 ~~aVlra~F~~~~~qliS~~adGliKlWn 575 (775)
T KOG0319|consen 547 TSAVLRASFIRNGKQLISAGADGLIKLWN 575 (775)
T ss_pred cceeEeeeeeeCCcEEEeccCCCcEEEEe
Confidence 99999999999999999999999999995
No 59
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=4e-32 Score=329.42 Aligned_cols=153 Identities=19% Similarity=0.192 Sum_probs=130.7
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++.+.||+|+||.||+|.++. ..+..||+|.+.+.........+.+ .+|+.+++.++||||++
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~-------~~E~~~l~~l~hp~Iv~ 95 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKN-----EDFPPVAIKRFEKSKIIKQKQVDHV-------FSERKILNYINHPFCVN 95 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEEC-----CCCeEEEEEEEEHHHhhhhhhHHHH-------HHHHHHHHhCCCCCCcc
Confidence 36789999999999999999998531 2346899999875433222222222 28999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
+++++.+++.+|+||||++ |+|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+|
T Consensus 96 ~~~~~~~~~~~~lv~Ey~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~--~ik 171 (340)
T PTZ00426 96 LYGSFKDESYLYLVLEFVIGGEFFTFLR--RNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDG--FIK 171 (340)
T ss_pred eEEEEEeCCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC--CEE
Confidence 9999999999999999998 59999998 456789999999999999999999999999999999999999999 899
Q ss_pred EEecCCcccC
Q 000316 319 ICDKPLVGFN 328 (1678)
Q Consensus 319 L~DFGlA~~~ 328 (1678)
|+|||+++..
T Consensus 172 L~DFG~a~~~ 181 (340)
T PTZ00426 172 MTDFGFAKVV 181 (340)
T ss_pred EecCCCCeec
Confidence 9999999753
No 60
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-33 Score=311.73 Aligned_cols=176 Identities=19% Similarity=0.151 Sum_probs=150.4
Q ss_pred ccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccc
Q 000316 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1678)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV 238 (1678)
..+++|..++.||+|+||.|.+|+.+ .+++.+|||++++.-....+..... +.|-++|+..+||.+.
T Consensus 165 vTm~dFdfLKvLGkGTFGKVIL~rEK------at~k~YAiKIlkKeviiakdEVAHT-------lTE~RVL~~~~HPFLt 231 (516)
T KOG0690|consen 165 VTMEDFDFLKVLGKGTFGKVILCREK------ATGKLYAIKILKKEVIIAKDEVAHT-------LTENRVLQNCRHPFLT 231 (516)
T ss_pred eccchhhHHHHhcCCccceEEEEeec------ccCceeehhhhhhhheeehHHhhhh-------hhHHHHHHhccCcHHH
Confidence 35789999999999999999999965 6899999999998655554433222 3899999999999999
Q ss_pred ceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 239 ~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
.|...|++.+.+|+||||+.| .|+-.+. +...+++..+++|-.+|+.||.|||+++||.||||.+|+|++.+| ++
T Consensus 232 ~LKYsFQt~drlCFVMeyanGGeLf~HLs--rer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDG--HI 307 (516)
T KOG0690|consen 232 SLKYSFQTQDRLCFVMEYANGGELFFHLS--RERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDG--HI 307 (516)
T ss_pred HhhhhhccCceEEEEEEEccCceEeeehh--hhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCC--ce
Confidence 999999999999999999995 9988887 577899999999999999999999999999999999999999999 99
Q ss_pred EEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
||+|||+++..... ..+..+-| |||.|.|||++.
T Consensus 308 KitDFGLCKE~I~~-----g~t~kTFC------GTPEYLAPEVle 341 (516)
T KOG0690|consen 308 KITDFGLCKEEIKY-----GDTTKTFC------GTPEYLAPEVLE 341 (516)
T ss_pred Eeeecccchhcccc-----cceecccc------CChhhcCchhhc
Confidence 99999999964422 12222333 789999998863
No 61
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=5.4e-32 Score=320.22 Aligned_cols=151 Identities=22% Similarity=0.244 Sum_probs=125.3
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC---CCCccc
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL---RHPNVA 238 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l---~HpNIV 238 (1678)
.+|++++.||+|+||.||+|++.. ..+..+|+|.+............+. +|+.+++.+ +||||+
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~hpniv 67 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLK-----NGGRFVALKRVRVQTGEEGMPLSTI--------REVAVLRHLETFEHPNVV 67 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcC-----CCCeEEEEEEEecccCCCCchHHHH--------HHHHHHHhhcccCCCCcc
Confidence 369999999999999999998632 3467899999875433322222333 666666555 799999
Q ss_pred ceeeEEEe-----CCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC
Q 000316 239 PVLGLLKT-----SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 239 ~l~~~~~~-----~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g 313 (1678)
++++++.. ...+++||||++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 68 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~ 147 (290)
T cd07862 68 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG 147 (290)
T ss_pred eEEEEEecccCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCC
Confidence 99999862 4568999999999999999865556689999999999999999999999999999999999999999
Q ss_pred ceeEEEEecCCccc
Q 000316 314 WSWLYICDKPLVGF 327 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 148 --~~kl~Dfg~~~~ 159 (290)
T cd07862 148 --QIKLADFGLARI 159 (290)
T ss_pred --CEEEccccceEe
Confidence 899999999974
No 62
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=6e-32 Score=319.65 Aligned_cols=149 Identities=15% Similarity=0.082 Sum_probs=129.1
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH-HHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
.|+..+.||+|+||.||+|.+. .+++.||+|.+.+....... ...+. +|+.+|+.++|+||++++
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~E~~il~~l~~~~iv~~~ 66 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVR------ATGKMYACKKLEKKRIKKRKGEAMAL--------NEKRILEKVNSRFVVSLA 66 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEe------cCCceEEEEEeeHhhhhhhhhHHHHH--------HHHHHHHhcCCCcEEEEE
Confidence 3889999999999999999965 47889999998754332222 12233 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++.+++.+++||||++ |+|.+++.......+++..+..++.|++.||+|||++||+||||||+|||++.++ .+||+
T Consensus 67 ~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~--~~kl~ 144 (285)
T cd05631 67 YAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRG--HIRIS 144 (285)
T ss_pred EEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCC--CEEEe
Confidence 99999999999999999 4998888654455689999999999999999999999999999999999999998 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||+++.
T Consensus 145 Dfg~~~~ 151 (285)
T cd05631 145 DLGLAVQ 151 (285)
T ss_pred eCCCcEE
Confidence 9999875
No 63
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.98 E-value=8.1e-34 Score=320.19 Aligned_cols=207 Identities=17% Similarity=0.246 Sum_probs=177.2
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
...+|++.+.||+|+||.|-+|.+. ..|+.||||.|+++++..+...-.++ |||+||..|+||||+.
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~------~sgR~VAiKsIrKdkIkdeqDlvhIR-------REIeIMSsLNHPhII~ 117 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEH------KSGREVAIKSIRKDKIKDEQDLVHIR-------REIEIMSSLNHPHIIQ 117 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhc------cCCcEeehhhhhhhhcccHHHHHHHH-------HHHHHHhhcCCCceee
Confidence 3458999999999999999999965 47899999999998876654444444 9999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
+|++|+..+.+.|||||.. |+|+++|. ..+.+++.+++.+++||++|+.|||.++|+|||||.+|||+|.++ .+|
T Consensus 118 IyEVFENkdKIvivMEYaS~GeLYDYiS--er~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~--NiK 193 (668)
T KOG0611|consen 118 IYEVFENKDKIVIVMEYASGGELYDYIS--ERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNN--NIK 193 (668)
T ss_pred hhhhhcCCceEEEEEEecCCccHHHHHH--HhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCC--Cee
Confidence 9999999999999999999 59999998 677899999999999999999999999999999999999999999 899
Q ss_pred EEecCCcccCCCCCcccccCCCCcceeecccccCccccccccccccccc-ccccccccCccchhhhHhhhccccCCCCC
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWH-SQFNRWWRGELSNFEYLLFLNKLAGRRWG 396 (1678)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~-~~~d~W~~G~isnfeyL~~ln~~aGRs~~ 396 (1678)
|+|||++....... ...++| |+|.|++||++.+.+|. +.+|-|+.|.+. |-.+...-+|.||.++
T Consensus 194 IADFGLSNly~~~k-----------fLqTFC-GSPLYASPEIvNG~PY~GPEVDsWsLGvLL-YtLVyGtMPFDG~Dhk 259 (668)
T KOG0611|consen 194 IADFGLSNLYADKK-----------FLQTFC-GSPLYASPEIVNGTPYKGPEVDSWSLGVLL-YTLVYGTMPFDGRDHK 259 (668)
T ss_pred eeccchhhhhcccc-----------HHHHhc-CCcccCCccccCCCCCCCCccchhhHHHHH-HHHhhcccccCCchHH
Confidence 99999997543210 112334 68899999999999995 599999999775 5555556677777654
No 64
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=99.98 E-value=8.6e-31 Score=280.14 Aligned_cols=263 Identities=20% Similarity=0.305 Sum_probs=225.4
Q ss_pred CeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCe--EEEEEecCCcc
Q 000316 1299 DFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN--CVSGYYGHEEV 1375 (1678)
Q Consensus 1299 ~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~--~l~~l~gH~~~ 1375 (1678)
-+|+|+|.|.+||+|.+. |.|.+++.-..+.|+.+...||++.||+|+. ..||+||+.+++ ++.+|.+|++.
T Consensus 11 viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-----qhvRlyD~~S~np~Pv~t~e~h~kN 85 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGN-----QHVRLYDLNSNNPNPVATFEGHTKN 85 (311)
T ss_pred eEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccC-----CeeEEEEccCCCCCceeEEeccCCc
Confidence 459999999999999988 8999999977889999999999999999994 899999998875 58999999999
Q ss_pred EEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecC
Q 000316 1376 VNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDG 1453 (1678)
Q Consensus 1376 V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~ 1453 (1678)
|++|.|..+++.+ +|.||++||||++.-.+.+.++..
T Consensus 86 VtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~----------------------------------------- 124 (311)
T KOG0315|consen 86 VTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQHN----------------------------------------- 124 (311)
T ss_pred eEEEEEeecCeEEEecCCCceEEEEeccCcccchhccCC-----------------------------------------
Confidence 9999999999988 455999999999986665555421
Q ss_pred CceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecC
Q 000316 1454 NLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSS 1533 (1678)
Q Consensus 1454 ~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~D 1533 (1678)
..|+++..+|+...|++|..+|.|++||++...+.+.+..... ..|.++++. ++|.+++++...
T Consensus 125 spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~-----~~i~sl~v~-----------~dgsml~a~nnk 188 (311)
T KOG0315|consen 125 SPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDD-----TSIQSLTVM-----------PDGSMLAAANNK 188 (311)
T ss_pred CCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCC-----cceeeEEEc-----------CCCcEEEEecCC
Confidence 2255666667788999999999999999998877776654432 346666653 677899999999
Q ss_pred CeEEEEeCCCC------cEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE--EEE
Q 000316 1534 GQCRLFDVRSG------NVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFS 1604 (1678)
Q Consensus 1534 g~I~lWD~~tg------~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afS 1604 (1678)
|++++|++-++ .++.++++|.+.+..+. +||+++||++|.|.+++||+..+. .+....++||..+|+ +||
T Consensus 189 G~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~-~kle~~l~gh~rWvWdc~FS 267 (311)
T KOG0315|consen 189 GNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDF-FKLELVLTGHQRWVWDCAFS 267 (311)
T ss_pred ccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCc-eeeEEEeecCCceEEeeeec
Confidence 99999999764 36677899999999988 999999999999999999999886 344568899999999 499
Q ss_pred ecCCEEEEEeCCC-eEEEecC
Q 000316 1605 VWGQDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1605 pdg~~LaSgs~D~-I~vwdl~ 1624 (1678)
.||++|++|+.|+ +++|+++
T Consensus 268 ~dg~YlvTassd~~~rlW~~~ 288 (311)
T KOG0315|consen 268 ADGEYLVTASSDHTARLWDLS 288 (311)
T ss_pred cCccEEEecCCCCceeecccc
Confidence 9999999999999 9999986
No 65
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.98 E-value=4.3e-32 Score=334.96 Aligned_cols=180 Identities=14% Similarity=0.147 Sum_probs=144.1
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++++.||+|+||.||+|++. .+++.||+|..... ... +|+++|+.++|||||++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~------~~~~~vaiK~~~~~--------~~~--------~E~~il~~l~HpnIv~~ 148 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDN------KTCEHVVIKAGQRG--------GTA--------TEAHILRAINHPSIIQL 148 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEEC------CCCCEEEEechhhh--------hhH--------HHHHHHHhCCCCCCCCE
Confidence 457999999999999999999975 57889999975321 122 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++|..+...++|||++.++|..++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 149 ~~~~~~~~~~~lv~e~~~~~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~--~vkL~ 224 (391)
T PHA03212 149 KGTFTYNKFTCLILPRYKTDLYCYLA--AKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPG--DVCLG 224 (391)
T ss_pred eEEEEECCeeEEEEecCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCC--CEEEE
Confidence 99999999999999999999999987 345688999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccC
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 376 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G 376 (1678)
|||+|+........ ......||+.|+|||++.+..|+.++|+|+.|
T Consensus 225 DFG~a~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 270 (391)
T PHA03212 225 DFGAACFPVDINAN----------KYYGWAGTIATNAPELLARDPYGPAVDIWSAG 270 (391)
T ss_pred eCCccccccccccc----------ccccccCccCCCChhhhcCCCCCcHHHHHHHH
Confidence 99999743211000 00112366677777765554444455555555
No 66
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.98 E-value=1e-31 Score=330.06 Aligned_cols=147 Identities=27% Similarity=0.362 Sum_probs=128.6
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|+++++||+|+||.||+|.+. .++..||+|.+..........+++. +|+.+|+.++||||+++++
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~niv~~~~ 66 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDP------RDGKRVALKKMPNVFQNLVSCKRVF--------RELKMLCFFKHDNVLSALD 66 (372)
T ss_pred CCcccceeeeCCCEEEEEEEEC------CCCCEEEEEeccccccchHHHHHHH--------HHHHHHHhCCCCCcCCHhh
Confidence 4788999999999999999964 4688999999865322222333343 8999999999999999999
Q ss_pred EEEeCC-----eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 243 LLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 243 ~~~~~~-----~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++...+ .+|+||||+.++|.+.+. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~~~l~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~--~~ 142 (372)
T cd07853 67 ILQPPHIDPFEEIYVVTELMQSDLHKIIV--SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNC--VL 142 (372)
T ss_pred eecCCCccccceEEEEeeccccCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCC--CE
Confidence 998876 899999999999999887 456789999999999999999999999999999999999999999 89
Q ss_pred EEEecCCccc
Q 000316 318 YICDKPLVGF 327 (1678)
Q Consensus 318 KL~DFGlA~~ 327 (1678)
||+|||+++.
T Consensus 143 kL~Dfg~a~~ 152 (372)
T cd07853 143 KICDFGLARV 152 (372)
T ss_pred Eeccccceee
Confidence 9999999874
No 67
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.98 E-value=9.9e-32 Score=322.16 Aligned_cols=140 Identities=21% Similarity=0.253 Sum_probs=122.6
Q ss_pred eeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh-HHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeCC
Q 000316 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 248 (1678)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~~ 248 (1678)
||+|+||.||+|++. .++..||+|.+.+..... .....+. +|+.+|+.++||||+++++++.+++
T Consensus 1 lg~G~~g~Vy~~~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~~~~~~~~~~ 66 (312)
T cd05585 1 IGKGSFGKVMQVRKR------DTQRIYALKTIRKAHIVSRSEVTHTL--------AERTVLAQVNCPFIVPLKFSFQSPE 66 (312)
T ss_pred CCcCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhCCCCcEeceeeEEecCC
Confidence 799999999999964 467899999987533222 2223333 8999999999999999999999999
Q ss_pred eEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCccc
Q 000316 249 LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1678)
Q Consensus 249 ~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~ 327 (1678)
.+|+||||++| +|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++.
T Consensus 67 ~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~--~~kl~Dfg~~~~ 142 (312)
T cd05585 67 KLYLVLAFINGGELFHHLQ--REGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQG--HIALCDFGLCKL 142 (312)
T ss_pred eEEEEEcCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCC--cEEEEECccccc
Confidence 99999999995 9999998 456789999999999999999999999999999999999999999 899999999874
No 68
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.98 E-value=5.5e-31 Score=292.94 Aligned_cols=295 Identities=21% Similarity=0.316 Sum_probs=245.6
Q ss_pred EeCCCceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcEEeC-
Q 000316 1313 WKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC- 1391 (1678)
Q Consensus 1313 Wd~~~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~laS~- 1391 (1678)
|...-+..+.+.||.+.|+||++.|-.+.++|||. |++|+|||+++|+...++.||-..|..|++++-..++.|+
T Consensus 137 WHapwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~----DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~g 212 (460)
T KOG0285|consen 137 WHAPWKLYRVISGHLGWVRSVAVDPGNEWFATGSA----DRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAG 212 (460)
T ss_pred ccCcceehhhhhhccceEEEEeeCCCceeEEecCC----CceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEec
Confidence 44444567889999999999999999999999998 9999999999999999999999999999999988898554
Q ss_pred -CCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEE
Q 000316 1392 -DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVV 1470 (1678)
Q Consensus 1392 -DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Las 1470 (1678)
|+.|+.||+..++.++.+-+|-. .|.|++.+|.-..+++
T Consensus 213 edk~VKCwDLe~nkvIR~YhGHlS----------------------------------------~V~~L~lhPTldvl~t 252 (460)
T KOG0285|consen 213 EDKQVKCWDLEYNKVIRHYHGHLS----------------------------------------GVYCLDLHPTLDVLVT 252 (460)
T ss_pred CCCeeEEEechhhhhHHHhccccc----------------------------------------eeEEEeccccceeEEe
Confidence 99999999999998887766521 2667777777889999
Q ss_pred EECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEE
Q 000316 1471 GIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASW 1550 (1678)
Q Consensus 1471 gs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l 1550 (1678)
|+.|.++|+||+++...++.+.||... |..|.+.+ -..-+++||.|++|++||++.|+.+.++
T Consensus 253 ~grDst~RvWDiRtr~~V~~l~GH~~~------V~~V~~~~-----------~dpqvit~S~D~tvrlWDl~agkt~~tl 315 (460)
T KOG0285|consen 253 GGRDSTIRVWDIRTRASVHVLSGHTNP------VASVMCQP-----------TDPQVITGSHDSTVRLWDLRAGKTMITL 315 (460)
T ss_pred cCCcceEEEeeecccceEEEecCCCCc------ceeEEeec-----------CCCceEEecCCceEEEeeeccCceeEee
Confidence 999999999999999999999987654 55555432 1236999999999999999999999999
Q ss_pred eccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEEEEecC-CEEEEEeCCC-eEEEecCCCC
Q 000316 1551 RAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWG-QDVISISNNK-IGLSSLSKSA 1627 (1678)
Q Consensus 1551 ~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~afSpdg-~~LaSgs~D~-I~vwdl~~~~ 1627 (1678)
..|+..|.+++ +|....+||+|.| .|+-|++..+ ..+..+.+|+..|++++.+. ..+++|++++ +.+||..
T Consensus 316 t~hkksvral~lhP~e~~fASas~d-nik~w~~p~g--~f~~nlsgh~~iintl~~nsD~v~~~G~dng~~~fwdwk--- 389 (460)
T KOG0285|consen 316 THHKKSVRALCLHPKENLFASASPD-NIKQWKLPEG--EFLQNLSGHNAIINTLSVNSDGVLVSGGDNGSIMFWDWK--- 389 (460)
T ss_pred ecccceeeEEecCCchhhhhccCCc-cceeccCCcc--chhhccccccceeeeeeeccCceEEEcCCceEEEEEecC---
Confidence 99999999999 9999999999987 7899999988 55667999999999877664 5778888888 9999975
Q ss_pred CCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1628 DEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1628 ~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
+|......+.+.... .......|.+.+|...|..|+||..|.+|++|
T Consensus 390 --sg~nyQ~~~t~vqpG-Sl~sEagI~as~fDktg~rlit~eadKtIk~~ 436 (460)
T KOG0285|consen 390 --SGHNYQRGQTIVQPG-SLESEAGIFASCFDKTGSRLITGEADKTIKMY 436 (460)
T ss_pred --cCcccccccccccCC-ccccccceeEEeecccCceEEeccCCcceEEE
Confidence 222222222221111 11234579999999999999999999999998
No 69
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.98 E-value=2.6e-31 Score=317.81 Aligned_cols=149 Identities=21% Similarity=0.271 Sum_probs=130.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
+++|+++++||+|+||.||+|+++ .++..+|+|.++...... ....+. +|+.+++.++||||+++
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~-~~~~~~--------~E~~~l~~l~h~~iv~~ 69 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSK------LTENLVALKEIRLEHEEG-APCTAI--------REVSLLKDLKHANIVTL 69 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEec------CCCCeEEEEEeeccccCC-cchhHH--------HHHHHHHhCCCCCcceE
Confidence 578999999999999999999965 467889999987543221 122233 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
++++..++..++||||++++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 70 ~~~~~~~~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~--~~kl~ 146 (309)
T cd07872 70 HDIVHTDKSLTLVFEYLDKDLKQYMDD-CGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERG--ELKLA 146 (309)
T ss_pred EEEEeeCCeEEEEEeCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEC
Confidence 999999999999999999999998874 344578999999999999999999999999999999999999998 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||+++.
T Consensus 147 Dfg~~~~ 153 (309)
T cd07872 147 DFGLARA 153 (309)
T ss_pred cccccee
Confidence 9999873
No 70
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.98 E-value=1.9e-31 Score=322.15 Aligned_cols=142 Identities=22% Similarity=0.187 Sum_probs=124.1
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh-HHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEe
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~ 246 (1678)
+.||+|+||.||+|++. .++..||+|++.+..... .....+. +|+.+|+.++||||+++++++..
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~hp~iv~~~~~~~~ 66 (328)
T cd05593 1 KLLGKGTFGKVILVREK------ASGKYYAMKILKKEVIIAKDEVAHTL--------TESRVLKNTRHPFLTSLKYSFQT 66 (328)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhCCCCCCcceEEEEEc
Confidence 46999999999999965 568899999997643222 2223333 89999999999999999999999
Q ss_pred CCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCc
Q 000316 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1678)
Q Consensus 247 ~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA 325 (1678)
++.+|+||||+++ +|.+++. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||++
T Consensus 67 ~~~~~lv~Ey~~~g~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~--~~kL~DfG~~ 142 (328)
T cd05593 67 KDRLCFVMEYVNGGELFFHLS--RERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDG--HIKITDFGLC 142 (328)
T ss_pred CCEEEEEEeCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCC--cEEEecCcCC
Confidence 9999999999995 9988887 456789999999999999999999999999999999999999999 8999999998
Q ss_pred cc
Q 000316 326 GF 327 (1678)
Q Consensus 326 ~~ 327 (1678)
+.
T Consensus 143 ~~ 144 (328)
T cd05593 143 KE 144 (328)
T ss_pred cc
Confidence 74
No 71
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.98 E-value=1.9e-31 Score=327.36 Aligned_cols=173 Identities=17% Similarity=0.167 Sum_probs=140.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|++. .++..+|+|.+.+...........+. +|+.+++.++||||+++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~il~~~~h~~iv~~ 108 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHK------SSKQVYAMKLLSKFEMIKRSDSAFFW-------EERDIMAHANSEWIVQL 108 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhhHHHHH-------HHHHHHHhCCCCCcceE
Confidence 568999999999999999999965 46889999999753322222222232 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+++.+|+||||++| +|.+++.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||
T Consensus 109 ~~~~~~~~~~~lv~Ey~~gg~L~~~l~~---~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~--~~kL 183 (370)
T cd05596 109 HYAFQDDKYLYMVMEYMPGGDLVNLMSN---YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG--HLKL 183 (370)
T ss_pred EEEEecCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCC--CEEE
Confidence 9999999999999999984 99999873 3578999999999999999999999999999999999999999 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCccccccccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 361 (1678)
+|||+++........ ......||+.|||||++
T Consensus 184 ~DfG~~~~~~~~~~~----------~~~~~~gt~~y~aPE~~ 215 (370)
T cd05596 184 ADFGTCMKMDANGMV----------RCDTAVGTPDYISPEVL 215 (370)
T ss_pred EeccceeeccCCCcc----------cCCCCCCCcCeECHHHh
Confidence 999999753311000 00112367778887764
No 72
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.97 E-value=9.6e-30 Score=295.36 Aligned_cols=377 Identities=16% Similarity=0.148 Sum_probs=278.7
Q ss_pred cccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCe
Q 000316 1278 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGT 1354 (1678)
Q Consensus 1278 ~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~Dgt 1354 (1678)
.+.||+-.|.+ |-|.-.+ .++|||.|.+|.+|+-. -+.-.+++.|+.-|+||.|+|||.+++|+|. ||+
T Consensus 142 ei~GhSr~ins~~~KpsRPf----Ri~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gs----Dgk 213 (603)
T KOG0318|consen 142 EITGHSRRINSVDFKPSRPF----RIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGS----DGK 213 (603)
T ss_pred eeeccceeEeeeeccCCCce----EEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecC----Ccc
Confidence 46789888886 5554443 39999999999998844 4567788999999999999999999999997 999
Q ss_pred EEEEeCCCCeEEEEEe---cCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCcc--c--cccCCCCCC
Q 000316 1355 VQKWELTRINCVSGYY---GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMD--S--LHGGSPSSS 1425 (1678)
Q Consensus 1355 VrlWDl~tg~~l~~l~---gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~--~--~~~~s~s~~ 1425 (1678)
|.+||-.+|+.+..+. +|++.|++++|+||+.++ +|.|+++||||+.++++++++...... . ......+.-
T Consensus 214 i~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~l 293 (603)
T KOG0318|consen 214 IYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHL 293 (603)
T ss_pred EEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeE
Confidence 9999999999999998 899999999999999998 667999999999999999999865431 1 111111111
Q ss_pred ccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeee-----------EEeeCC
Q 000316 1426 ISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL-----------HLWRGE 1494 (1678)
Q Consensus 1426 ~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l-----------~~l~~~ 1494 (1678)
..+...+..+.++....+ ....+.=+...++++..++++++|++|+.||.|.-||..+|..- ..+..+
T Consensus 294 ItVSl~G~in~ln~~d~~-~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~ 372 (603)
T KOG0318|consen 294 ITVSLSGTINYLNPSDPS-VLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAAS 372 (603)
T ss_pred EEEEcCcEEEEecccCCC-hhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeec
Confidence 111222223333333333 44444456667999999999999999999999999999876422 111111
Q ss_pred C-C---ccc----------------------CCCcceEEEeeCCCc---------------------------cccCccc
Q 000316 1495 P-T---ELG----------------------FPSLVSAICACGSEK---------------------------MQAGGAV 1521 (1678)
Q Consensus 1495 ~-~---~v~----------------------~~~~V~sva~~~~~~---------------------------~s~dg~~ 1521 (1678)
. + .++ ....-.++|...... -++....
T Consensus 373 ~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~ 452 (603)
T KOG0318|consen 373 ESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVS 452 (603)
T ss_pred CCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEc
Confidence 0 0 000 011111222222210 0122345
Q ss_pred CCCCEEEEEecCCeEEEEeCCCCc--EEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCC
Q 000316 1522 ASPSWIAAGLSSGQCRLFDVRSGN--VIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN 1598 (1678)
Q Consensus 1522 p~g~~LasGs~Dg~I~lWD~~tg~--~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~ 1598 (1678)
|+++.+|.|+.||.|++|.+..+. .......|.++|++|+ +||+.+||+|...+.|.+||+.+... ......-|+.
T Consensus 453 ~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~-~~~~w~FHta 531 (603)
T KOG0318|consen 453 PDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREV-KTNRWAFHTA 531 (603)
T ss_pred CCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCce-ecceeeeeee
Confidence 788999999999999999998654 3345567999999999 99999999999999999999998753 3445666999
Q ss_pred CEE--EEEecCCEEEEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEE
Q 000316 1599 GIS--GFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLR 1675 (1678)
Q Consensus 1599 ~V~--afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~Ir 1675 (1678)
.|. +|||+..++||||-|. |.||++.++.+. -.+ .+ .|...|+.+.|. |...+++.|.|-.||
T Consensus 532 kI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~~--------i~i----kn-AH~~gVn~v~wl-de~tvvSsG~Da~iK 597 (603)
T KOG0318|consen 532 KINCVAWSPNNKLVATGSLDTNVIIYSVKKPAKH--------III----KN-AHLGGVNSVAWL-DESTVVSSGQDANIK 597 (603)
T ss_pred eEEEEEeCCCceEEEeccccceEEEEEccChhhh--------eEe----cc-ccccCceeEEEe-cCceEEeccCcceeE
Confidence 999 4999999999999999 999999743211 111 12 477779999997 556788899999999
Q ss_pred EcC
Q 000316 1676 LCC 1678 (1678)
Q Consensus 1676 Iwd 1678 (1678)
+|.
T Consensus 598 ~W~ 600 (603)
T KOG0318|consen 598 VWN 600 (603)
T ss_pred Eec
Confidence 994
No 73
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-32 Score=318.29 Aligned_cols=171 Identities=16% Similarity=0.201 Sum_probs=146.1
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
..|+.++.||+|+||.||+|.+. .+++.||+|++....... ...+.. +|+.+|.+++++||.++|
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~------~t~k~vAiKii~Le~~~d-eIediq--------qei~~Ls~~~~~~it~yy 77 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDN------KTKKVVAIKIIDLEEAED-EIEDIQ--------QEISVLSQCDSPNITEYY 77 (467)
T ss_pred cccccchhccccccceeeeeeec------cccceEEEEEechhhcch-hhHHHH--------HHHHHHHhcCcchHHhhh
Confidence 46888899999999999999976 688999999998753322 222332 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+.|..+..++++||||.| ++.++++ ....+.+.++..++++++.||.|||.++.+|||||+.|||+..+| .+||+
T Consensus 78 gsyl~g~~LwiiMey~~gGsv~~lL~--~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g--~vkl~ 153 (467)
T KOG0201|consen 78 GSYLKGTKLWIIMEYCGGGSVLDLLK--SGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESG--DVKLA 153 (467)
T ss_pred hheeecccHHHHHHHhcCcchhhhhc--cCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccC--cEEEE
Confidence 999999999999999995 9999998 566669999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
|||++......... .-..+|||+|||||++.
T Consensus 154 DfgVa~ql~~~~~r-----------r~tfvGTPfwMAPEVI~ 184 (467)
T KOG0201|consen 154 DFGVAGQLTNTVKR-----------RKTFVGTPFWMAPEVIK 184 (467)
T ss_pred ecceeeeeechhhc-----------cccccccccccchhhhc
Confidence 99999865532211 12346999999999864
No 74
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.97 E-value=3e-31 Score=313.36 Aligned_cols=149 Identities=22% Similarity=0.269 Sum_probs=124.5
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC---CCCcccc
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL---RHPNVAP 239 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l---~HpNIV~ 239 (1678)
+|++++.||+|+||+||+|+++ .++..+|+|.++............. +|+.+++.+ +||||++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~h~ni~~ 66 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDP------HSGHFVALKSVRVQTNEDGLPLSTV--------REVALLKRLEAFDHPNIVR 66 (288)
T ss_pred CceEeeEEeecCCeEEEEEEEC------CCCcEEEEEEeccCcCCCCCchHHH--------HHHHHHHHhhhcCCCCeee
Confidence 5899999999999999999965 5788999999875432221112222 666666555 7999999
Q ss_pred eeeEEEeC-----CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 240 VLGLLKTS-----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 240 l~~~~~~~-----~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
+++++... ..+++||||++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 67 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~- 145 (288)
T cd07863 67 LMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG- 145 (288)
T ss_pred eeeeeccccCCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC-
Confidence 99998752 468999999999999999865555689999999999999999999999999999999999999999
Q ss_pred eeEEEEecCCccc
Q 000316 315 SWLYICDKPLVGF 327 (1678)
Q Consensus 315 ~~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 146 -~~kl~dfg~~~~ 157 (288)
T cd07863 146 -QVKLADFGLARI 157 (288)
T ss_pred -CEEECccCcccc
Confidence 899999999874
No 75
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=4.5e-31 Score=322.81 Aligned_cols=148 Identities=22% Similarity=0.282 Sum_probs=127.9
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++.+.||+|+||.||+|++. .++..||+|.+............+. +|+.+++.++||||++
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~niv~ 84 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDT------VLGINVAVKKLSRPFQNQTHAKRAY--------RELVLLKCVNHKNIIS 84 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEc------CCCceeEEEEecccccchhHHHHHH--------HHHHHHHhCCCCCEee
Confidence 4689999999999999999999965 4688999999976433333333444 8999999999999999
Q ss_pred eeeEEEeCC------eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC
Q 000316 240 VLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 240 l~~~~~~~~------~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g 313 (1678)
+++++.... .+|+||||++++|.+.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 85 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~ 160 (359)
T cd07876 85 LLNVFTPQKSLEEFQDVYLVMELMDANLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 160 (359)
T ss_pred eeeeeccCCCccccceeEEEEeCCCcCHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC
Confidence 999987543 579999999999888875 2378899999999999999999999999999999999999999
Q ss_pred ceeEEEEecCCccc
Q 000316 314 WSWLYICDKPLVGF 327 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 161 --~~kl~Dfg~a~~ 172 (359)
T cd07876 161 --TLKILDFGLART 172 (359)
T ss_pred --CEEEecCCCccc
Confidence 899999999974
No 76
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=3.7e-31 Score=296.25 Aligned_cols=289 Identities=19% Similarity=0.297 Sum_probs=248.6
Q ss_pred EEeCCCceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcEEeC
Q 000316 1312 PWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC 1391 (1678)
Q Consensus 1312 lWd~~~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~laS~ 1391 (1678)
.|-......+.+.||..+|+.+-|+|+...+++++. |++|++||..+|++...++||++.|.+|+|+..|..+++|
T Consensus 93 ~wipRp~l~~~l~g~r~~vt~v~~hp~~~~v~~as~----d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tc 168 (406)
T KOG0295|consen 93 LWIPRPNLVQKLAGHRSSVTRVIFHPSEALVVSASE----DATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATC 168 (406)
T ss_pred hcCCCCCchhhhhccccceeeeeeccCceEEEEecC----CceEEEEEccchhhhhhhhccccceeEEEEecCccEEEec
Confidence 365555678889999999999999999999999997 9999999999999999999999999999999999888766
Q ss_pred --CCcEEEEECCC-CceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEE
Q 000316 1392 --DGTLHVWNSQT-GKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERL 1468 (1678)
Q Consensus 1392 --DgtVrIWD~~t-g~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~L 1468 (1678)
|-.+++||..+ -++++.+.+|. ..+.++.+-|.|.++
T Consensus 169 SsDl~~~LWd~~~~~~c~ks~~gh~----------------------------------------h~vS~V~f~P~gd~i 208 (406)
T KOG0295|consen 169 SSDLSAKLWDFDTFFRCIKSLIGHE----------------------------------------HGVSSVFFLPLGDHI 208 (406)
T ss_pred CCccchhheeHHHHHHHHHHhcCcc----------------------------------------cceeeEEEEecCCee
Confidence 77799999875 34444444332 236677777789999
Q ss_pred EEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEE
Q 000316 1469 VVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1548 (1678)
Q Consensus 1469 asgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~ 1548 (1678)
++++.|.+|+.||+.+|-++.++.+| +.+|+.++.. .||.++|+|+.|.++++|-+.++++..
T Consensus 209 lS~srD~tik~We~~tg~cv~t~~~h------~ewvr~v~v~-----------~DGti~As~s~dqtl~vW~~~t~~~k~ 271 (406)
T KOG0295|consen 209 LSCSRDNTIKAWECDTGYCVKTFPGH------SEWVRMVRVN-----------QDGTIIASCSNDQTLRVWVVATKQCKA 271 (406)
T ss_pred eecccccceeEEecccceeEEeccCc------hHhEEEEEec-----------CCeeEEEecCCCceEEEEEeccchhhh
Confidence 99999999999999999999999965 4478887764 467899999999999999999999999
Q ss_pred EEeccCCCeEEEE-cC---------------CCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE--EEEecCCEE
Q 000316 1549 SWRAHDGYVTKLA-AP---------------EDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDV 1610 (1678)
Q Consensus 1549 ~l~gH~~~V~sva-sp---------------dg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~L 1610 (1678)
.++.|+.+|-+++ .| .+++++++|.|++|++||+.++ .++.++.||.++|. +|+|.|++|
T Consensus 272 ~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg--~cL~tL~ghdnwVr~~af~p~Gkyi 349 (406)
T KOG0295|consen 272 ELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTG--MCLFTLVGHDNWVRGVAFSPGGKYI 349 (406)
T ss_pred hhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCC--eEEEEEecccceeeeeEEcCCCeEE
Confidence 9999999998887 33 1259999999999999999999 88999999999999 599999999
Q ss_pred EEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1611 ISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1611 aSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
+|+.+|+ +++||+. ++++ .+.+. .|...|++++|+-+..+++||+-|.++++|
T Consensus 350 ~ScaDDktlrvwdl~-----~~~c----mk~~~-----ah~hfvt~lDfh~~~p~VvTGsVdqt~Kvw 403 (406)
T KOG0295|consen 350 LSCADDKTLRVWDLK-----NLQC----MKTLE-----AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 403 (406)
T ss_pred EEEecCCcEEEEEec-----ccee----eeccC-----CCcceeEEEecCCCCceEEeccccceeeee
Confidence 9999999 9999986 2222 12221 478899999999999999999999999999
No 77
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.97 E-value=2.7e-31 Score=320.03 Aligned_cols=142 Identities=20% Similarity=0.193 Sum_probs=123.6
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh-HHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEe
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~ 246 (1678)
+.||+|+||.||++++. .++..||+|.+....... .....+. +|+.+++.++||||++++++|..
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~hp~i~~~~~~~~~ 66 (323)
T cd05595 1 KLLGKGTFGKVILVREK------ATGRYYAMKILRKEVIIAKDEVAHTV--------TESRVLQNTRHPFLTALKYAFQT 66 (323)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhHHHHHHH--------HHHHHHHhCCCCCCcceeeEEec
Confidence 47999999999999965 468899999997642222 2222333 89999999999999999999999
Q ss_pred CCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCc
Q 000316 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1678)
Q Consensus 247 ~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA 325 (1678)
.+.+|+||||++| +|..++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 67 ~~~~~lv~E~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~--~~kL~Dfg~~ 142 (323)
T cd05595 67 HDRLCFVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG--HIKITDFGLC 142 (323)
T ss_pred CCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCC--CEEecccHHh
Confidence 9999999999995 9998887 456789999999999999999999999999999999999999999 8999999998
Q ss_pred cc
Q 000316 326 GF 327 (1678)
Q Consensus 326 ~~ 327 (1678)
+.
T Consensus 143 ~~ 144 (323)
T cd05595 143 KE 144 (323)
T ss_pred cc
Confidence 74
No 78
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.97 E-value=3.8e-31 Score=317.37 Aligned_cols=144 Identities=21% Similarity=0.221 Sum_probs=119.0
Q ss_pred eeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEe
Q 000316 167 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1678)
Q Consensus 167 ~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~ 246 (1678)
.++||+|+||+||+|+++ ...+++.+|+|.+...... .... +|+.+|+.++||||++++++|..
T Consensus 6 ~~~lG~G~~g~Vy~~~~~----~~~~~~~~aiK~~~~~~~~----~~~~--------~E~~~l~~l~h~niv~~~~~~~~ 69 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRK----DGKDDRDYALKQIEGTGIS----MSAC--------REIALLRELKHPNVISLQKVFLS 69 (317)
T ss_pred ccccccCCCeEEEEEEEc----cCCCCceEEEEEECCCCCc----HHHH--------HHHHHHHhcCCCCCcceeeeEec
Confidence 468999999999999853 1245688999998653222 1222 89999999999999999999864
Q ss_pred --CCeEEEeccCCCCCHHHHHhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEec----CCC
Q 000316 247 --SGLITSVIPKTPYTLENILQFS-------PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT----DSC 313 (1678)
Q Consensus 247 --~~~~~lVmEy~~g~L~~~l~~~-------~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~----~~g 313 (1678)
+..+|+||||++++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++ .++
T Consensus 70 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~ 149 (317)
T cd07868 70 HADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERG 149 (317)
T ss_pred CCCcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcC
Confidence 4578999999999999988642 123589999999999999999999999999999999999994 445
Q ss_pred ceeEEEEecCCcccC
Q 000316 314 WSWLYICDKPLVGFN 328 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~~ 328 (1678)
.+||+|||+|+..
T Consensus 150 --~~kl~DfG~a~~~ 162 (317)
T cd07868 150 --RVKIADMGFARLF 162 (317)
T ss_pred --cEEEeecCceecc
Confidence 8999999999743
No 79
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.97 E-value=5.7e-31 Score=317.30 Aligned_cols=145 Identities=18% Similarity=0.197 Sum_probs=123.1
Q ss_pred eeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH-HHHHHHhcCCCchhHHH---hhccCCCCcccc
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESS---VPGCLRHPNVAP 239 (1678)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~l~~~~~~~~~Ei~---iL~~l~HpNIV~ 239 (1678)
|++++.||+|+||.||+|.++ .++..||||.+++....... ...+. +|++ +++.++||||++
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~l~--------~e~~~~~~~~~l~hp~i~~ 66 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYK------KTGELYAIKALKKGDIIARDEVESLM--------CEKRIFETANSERHPFLVN 66 (324)
T ss_pred CeEEEEEeecCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhccccCCCChhc
Confidence 788999999999999999965 46789999999764322222 22222 5554 456778999999
Q ss_pred eeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
+++++.+.+.+|+||||++| +|...+. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+|
T Consensus 67 ~~~~~~~~~~~~lv~E~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~--~~k 141 (324)
T cd05589 67 LFACFQTEDHVCFVMEYAAGGDLMMHIH---TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEG--FVK 141 (324)
T ss_pred eeeEEEcCCEEEEEEcCCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCC--cEE
Confidence 99999999999999999995 9988876 35689999999999999999999999999999999999999999 899
Q ss_pred EEecCCccc
Q 000316 319 ICDKPLVGF 327 (1678)
Q Consensus 319 L~DFGlA~~ 327 (1678)
|+|||+++.
T Consensus 142 L~Dfg~~~~ 150 (324)
T cd05589 142 IADFGLCKE 150 (324)
T ss_pred eCcccCCcc
Confidence 999999874
No 80
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.97 E-value=3.5e-31 Score=318.60 Aligned_cols=142 Identities=19% Similarity=0.169 Sum_probs=122.1
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh-HHHHHHHHhcCCCchhHHHhhccC-CCCcccceeeEEE
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLK 245 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~l~~~~~ 245 (1678)
+.||+|+||.||+|+++ .++..||+|++.+..... .....+. +|+.+++.+ +||||+++++++.
T Consensus 1 ~~lg~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~h~~iv~~~~~~~ 66 (320)
T cd05590 1 RVLGKGSFGKVMLARLK------ESGRLYAVKVLKKDVILQDDDVECTM--------TEKRILSLARNHPFLTQLYCCFQ 66 (320)
T ss_pred CeeeeCCCeEEEEEEEc------CCCCEEEEEEEEHHHHhhccHHHHHH--------HHHHHHHhccCCCchhceeeEEE
Confidence 47999999999999965 568899999987543222 1222233 788888776 6999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
+.+.+|+||||++| +|.+++. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~iv~Ey~~~g~L~~~i~--~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~--~~kL~DfG~ 142 (320)
T cd05590 67 TPDRLFFVMEFVNGGDLMFHIQ--KSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEG--HCKLADFGM 142 (320)
T ss_pred cCCEEEEEEcCCCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC--cEEEeeCCC
Confidence 99999999999995 9999887 456789999999999999999999999999999999999999999 899999999
Q ss_pred ccc
Q 000316 325 VGF 327 (1678)
Q Consensus 325 A~~ 327 (1678)
++.
T Consensus 143 ~~~ 145 (320)
T cd05590 143 CKE 145 (320)
T ss_pred Cee
Confidence 874
No 81
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=4.3e-31 Score=319.31 Aligned_cols=151 Identities=18% Similarity=0.162 Sum_probs=128.1
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh-HHHHHHHHhcCCCchhHHHhhccC-CCCcccce
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCL-RHPNVAPV 240 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~l 240 (1678)
+|++++.||+|+||.||+|++.. ...++..||+|++.+..... ....+... +|+.+|+.+ +||||+++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~~~~aiK~~~~~~~~~~~~~~~~~~-------~e~~~l~~l~~~~~i~~~ 70 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVT---GHDTGKLYAMKVLQKAALVQKAKTVEHTR-------TERNVLEHVRQSPFLVTL 70 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcc---cCCCCCEEEEEEEEHHHHhhhhhHHHHHH-------HHHHHHHhccCCCCcccE
Confidence 58999999999999999998642 22468899999987532211 11112221 899999999 58999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++..++.+++||||++| +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 71 ~~~~~~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~--~~kl 146 (332)
T cd05614 71 HYAFQTEAKLHLILDYVSGGEMFTHLY--QRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEG--HVVL 146 (332)
T ss_pred EEEEecCCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCC--CEEE
Confidence 9999999999999999995 9999997 456689999999999999999999999999999999999999999 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||+++.
T Consensus 147 ~DfG~~~~ 154 (332)
T cd05614 147 TDFGLSKE 154 (332)
T ss_pred eeCcCCcc
Confidence 99999874
No 82
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.97 E-value=7.3e-31 Score=317.37 Aligned_cols=174 Identities=15% Similarity=0.092 Sum_probs=140.2
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++++.||+|+||.||++++. .++..||+|++.+.........+.++ +|+.+++.++||||++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~~~~~~i~~~~ 67 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMK------NTGQVYAMKILNKWEMLKRAETACFR-------EERDVLVNGDRRWITNLH 67 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhhHHHHH-------HHHHHHHhCCCCCCCceE
Confidence 47999999999999999999965 46789999998753222222222232 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
++|.+++.+|+||||++| +|.+++.. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~--~~kl~ 144 (331)
T cd05597 68 YAFQDENNLYLVMDYYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNG--HIRLA 144 (331)
T ss_pred EEEecCCeEEEEEecCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCC--CEEEE
Confidence 999999999999999985 99999973 245689999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCccccccccc
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 361 (1678)
|||+++........ ......||+.|||||++
T Consensus 145 Dfg~~~~~~~~~~~----------~~~~~~gt~~y~aPE~~ 175 (331)
T cd05597 145 DFGSCLRLLADGTV----------QSNVAVGTPDYISPEIL 175 (331)
T ss_pred ECCceeecCCCCCc----------cccceeccccccCHHHH
Confidence 99998753311100 01112367777777764
No 83
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=6.9e-32 Score=317.25 Aligned_cols=174 Identities=18% Similarity=0.218 Sum_probs=144.9
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-CCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-HpNIV~ 239 (1678)
...|+++++||+|+.+.||++.. .+..++|+|++.......+...-+. +|+.+|.+|+ |.+||+
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~-------s~~~iyalkkv~~~~~D~qtl~gy~--------nEI~lL~KLkg~~~IIq 424 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLN-------SDKQIYALKKVVLLEADNQTLDGYR--------NEIALLNKLKGHDKIIQ 424 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeec-------CCCcchhhhHHHHhhcCHHHHHHHH--------HHHHHHHHhcCCceEEE
Confidence 44799999999999999999984 4678899999877656666556666 9999999995 899999
Q ss_pred eeeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
||++-..++.+||||||-+.||..+|+. +....+.+.+++|.+|++.|+.++|.+||||-||||.|+|+-.. .+||
T Consensus 425 L~DYEv~d~~lYmvmE~Gd~DL~kiL~k-~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG---~LKL 500 (677)
T KOG0596|consen 425 LYDYEVTDGYLYMVMECGDIDLNKILKK-KKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKG---RLKL 500 (677)
T ss_pred EeeeeccCceEEEEeecccccHHHHHHh-ccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEee---eEEe
Confidence 9999999999999999999999999994 44456668999999999999999999999999999999999875 5999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
+|||+|......... . ....-.||+-||+||.+.
T Consensus 501 IDFGIA~aI~~DTTs---I------~kdsQvGT~NYMsPEAl~ 534 (677)
T KOG0596|consen 501 IDFGIANAIQPDTTS---I------VKDSQVGTVNYMSPEALT 534 (677)
T ss_pred eeechhcccCccccc---e------eeccccCcccccCHHHHh
Confidence 999999975532111 1 111224899999999764
No 84
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-32 Score=344.05 Aligned_cols=175 Identities=16% Similarity=0.119 Sum_probs=149.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||+|+||+|.+++++ .++.+||+|++++-.........+.+ .|..+|..-+.+.||+|
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k------~t~~VYAMK~lnK~eMlKr~~tA~F~-------EERDimv~~ns~Wiv~L 140 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHK------STEKVYAMKILNKWEMLKRAETACFR-------EERDIMVFGNSEWIVQL 140 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEee------ccccchhHHHhhHHHHhhchhHHHHH-------HHhHHHHcCCcHHHHHH
Confidence 568999999999999999999976 68899999999874444333334443 88999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
+.+|+++.++|+|||||+| ||..++.. ...+++..++||+.+|+.||.-||+.|.|||||||+|||||..| +|||
T Consensus 141 hyAFQD~~~LYlVMdY~pGGDlltLlSk--~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~G--HikL 216 (1317)
T KOG0612|consen 141 HYAFQDERYLYLVMDYMPGGDLLTLLSK--FDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSG--HIKL 216 (1317)
T ss_pred HHHhcCccceEEEEecccCchHHHHHhh--cCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccC--cEee
Confidence 9999999999999999995 99999983 44799999999999999999999999999999999999999999 9999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
+|||.+-.....+.. .+...+|||-|.+||++.
T Consensus 217 ADFGsClkm~~dG~V----------~s~~aVGTPDYISPEvLq 249 (1317)
T KOG0612|consen 217 ADFGSCLKMDADGTV----------RSSVAVGTPDYISPEVLQ 249 (1317)
T ss_pred ccchhHHhcCCCCcE----------EeccccCCCCccCHHHHH
Confidence 999987654422211 123346899999999875
No 85
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.97 E-value=7e-31 Score=316.49 Aligned_cols=147 Identities=17% Similarity=0.121 Sum_probs=126.4
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh-HHHHHHHHhcCCCchhHHHhhccCCC-Ccccce
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRH-PNVAPV 240 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~l~~~~~~~~~Ei~iL~~l~H-pNIV~l 240 (1678)
+|++++.||+|+||.||+|+++ .++..||+|++.+..... .....+. +|+.++..+.| ++|+++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~i~~~ 66 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERK------GTDELYAIKILKKDVIIQDDDVECTM--------VEKRVLALPGKPPFLTQL 66 (324)
T ss_pred CceEEEEEeeccCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhcCCCCceeee
Confidence 5899999999999999999964 467889999997643222 2223333 89999999976 468899
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+.+.+|+||||++| +|.+++. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~E~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~--~~kL 142 (324)
T cd05587 67 HSCFQTMDRLYFVMEYVNGGDLMYHIQ--QVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEG--HIKI 142 (324)
T ss_pred EEEEEcCCEEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCC--CEEE
Confidence 9999999999999999984 9999997 455689999999999999999999999999999999999999999 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||+++.
T Consensus 143 ~Dfg~~~~ 150 (324)
T cd05587 143 ADFGMCKE 150 (324)
T ss_pred eecCccee
Confidence 99999874
No 86
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.97 E-value=7.1e-31 Score=320.52 Aligned_cols=148 Identities=22% Similarity=0.275 Sum_probs=127.5
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++++.||+|+||.||+|.+. ..+..+|+|.+............+. +|+.+++.++||||++
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~niv~ 80 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDA------VLDRNVAIKKLSRPFQNQTHAKRAY--------RELVLMKCVNHKNIIS 80 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEec------CCCceEEEEEeCCcccChHHHHHHH--------HHHHHHHHhCCCchhc
Confidence 4679999999999999999999864 4678899999876433333333444 8999999999999999
Q ss_pred eeeEEEeCC------eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC
Q 000316 240 VLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 240 l~~~~~~~~------~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g 313 (1678)
+++++.... ..|+||||++++|.+.+.. .+++..++.++.|++.||.|||++||+||||||+|||++.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~ 156 (355)
T cd07874 81 LLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 156 (355)
T ss_pred eeeeeeccccccccceeEEEhhhhcccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCC
Confidence 999987543 5799999999998888762 378889999999999999999999999999999999999999
Q ss_pred ceeEEEEecCCccc
Q 000316 314 WSWLYICDKPLVGF 327 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 157 --~~kl~Dfg~~~~ 168 (355)
T cd07874 157 --TLKILDFGLART 168 (355)
T ss_pred --CEEEeeCccccc
Confidence 899999999974
No 87
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=7.2e-31 Score=321.63 Aligned_cols=149 Identities=22% Similarity=0.267 Sum_probs=127.8
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++.+.||+|+||.||+|.+. ..+..||||++............+. +|+.+++.++||||++
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~ii~ 87 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDA------ILERNVAIKKLSRPFQNQTHAKRAY--------RELVLMKCVNHKNIIG 87 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEEC------CCCcEEEEEEeCccccCchhHHHHH--------HHHHHHHhcCCCCccc
Confidence 4678999999999999999999965 4678899999876433333333343 8999999999999999
Q ss_pred eeeEEEeC------CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC
Q 000316 240 VLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 240 l~~~~~~~------~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g 313 (1678)
+++++... ..+|+||||++++|.+.+.. .+++..++.++.|++.||.|||++||+||||||+|||++.++
T Consensus 88 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~ 163 (364)
T cd07875 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 163 (364)
T ss_pred cceeecccccccccCeEEEEEeCCCCCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCC
Confidence 99988654 35799999999999988862 378889999999999999999999999999999999999999
Q ss_pred ceeEEEEecCCcccC
Q 000316 314 WSWLYICDKPLVGFN 328 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~~ 328 (1678)
.+||+|||+++..
T Consensus 164 --~~kL~DfG~a~~~ 176 (364)
T cd07875 164 --TLKILDFGLARTA 176 (364)
T ss_pred --cEEEEeCCCcccc
Confidence 8999999999743
No 88
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.97 E-value=3.5e-31 Score=321.55 Aligned_cols=149 Identities=26% Similarity=0.299 Sum_probs=127.8
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++++.||+|+||.||+|.+. .++..||+|.+............+. +|+.+|+.++||||++
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~ 78 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDT------RLRQKVAVKKLSRPFQSLIHARRTY--------RELRLLKHMKHENVIG 78 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEEC------CCCCEEEEEEeCchhhhhHHHHHHH--------HHHHHHHhcCCCchhh
Confidence 4678999999999999999999964 4678999999875432222223333 8999999999999999
Q ss_pred eeeEEEeC------CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC
Q 000316 240 VLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 240 l~~~~~~~------~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g 313 (1678)
++++|... ...|++||++.++|.++++ ...+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~ 155 (343)
T cd07878 79 LLDVFTPATSIENFNEVYLVTNLMGADLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDC 155 (343)
T ss_pred hhhhhcccccccccCcEEEEeecCCCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCC
Confidence 99998643 3579999999889998886 34689999999999999999999999999999999999999999
Q ss_pred ceeEEEEecCCccc
Q 000316 314 WSWLYICDKPLVGF 327 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 156 --~~kl~Dfg~~~~ 167 (343)
T cd07878 156 --ELRILDFGLARQ 167 (343)
T ss_pred --CEEEcCCcccee
Confidence 899999999874
No 89
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.97 E-value=3.3e-31 Score=319.45 Aligned_cols=142 Identities=20% Similarity=0.192 Sum_probs=123.3
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH-HHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEe
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~ 246 (1678)
+.||+|+||.||+|++. .++..||+|++.+...... ....+. +|+++++.++||||+++++++..
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~a~K~~~~~~~~~~~~~~~~~--------~e~~~l~~~~hp~i~~~~~~~~~ 66 (325)
T cd05594 1 KLLGKGTFGKVILVKEK------ATGRYYAMKILKKEVIVAKDEVAHTL--------TENRVLQNSRHPFLTALKYSFQT 66 (325)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhCCCCCCCceEEEEEc
Confidence 46999999999999965 4788999999976432222 222333 89999999999999999999999
Q ss_pred CCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 247 ~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
.+.+|+||||++| +|..++. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~lv~E~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~--~~kL~Dfg~ 142 (325)
T cd05594 67 HDRLCFVMEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG--HIKITDFGL 142 (325)
T ss_pred CCEEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCC--CEEEecCCC
Confidence 9999999999995 9998887 45678999999999999999999997 8999999999999999999 899999999
Q ss_pred ccc
Q 000316 325 VGF 327 (1678)
Q Consensus 325 A~~ 327 (1678)
++.
T Consensus 143 ~~~ 145 (325)
T cd05594 143 CKE 145 (325)
T ss_pred Cee
Confidence 874
No 90
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.97 E-value=1.8e-30 Score=292.01 Aligned_cols=328 Identities=18% Similarity=0.274 Sum_probs=251.4
Q ss_pred ccCcccccccccccchhhhhhhccccccCCCCceEeecCCCCCCCCCeEEEEeCCCCEEEEeCCCceeEEeccccccEEE
Q 000316 1253 SKNLIPQRRVYDYHKSSVERQEATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRS 1332 (1678)
Q Consensus 1253 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~gH~~~V~~fSpdg~~~~~~~LasgS~D~~v~lWd~~~~~l~tl~gH~~~V~s 1332 (1678)
..+.|..+.+.++++........-....-|.|||.+.-..+.| |.||++||++++||..|++..++.||+++|.+
T Consensus 75 ~~kgiSsE~~leIEYv~~~~aP~pl~~~~hdDWVSsv~~~~~~-----IltgsYDg~~riWd~~Gk~~~~~~Ght~~ik~ 149 (423)
T KOG0313|consen 75 EEKGISSEEILEIEYVEAITAPKPLQCFLHDDWVSSVKGASKW-----ILTGSYDGTSRIWDLKGKSIKTIVGHTGPIKS 149 (423)
T ss_pred HHcCcChhheeEEEEEEecCCCCccccccchhhhhhhcccCce-----EEEeecCCeeEEEecCCceEEEEecCCcceee
Confidence 4455677888888888776666667777799999987666776 99999999999999999999999999999999
Q ss_pred EEEecCC---CEEEEEecCCCCCCeEEEEeCCCCeE----EEEEecCCccEEEEeecCCCCcE--EeCCCcEEEEECCCC
Q 000316 1333 VAVGQDE---CTVFTAGIGPGFKGTVQKWELTRINC----VSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTG 1403 (1678)
Q Consensus 1333 vafspdg---~~LaSgS~d~~~DgtVrlWDl~tg~~----l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg 1403 (1678)
++|.-.. ..+++||. |.++++|..+.++. +..-+||...|-+|+..+++.++ +|.|.+|+||+..+
T Consensus 150 v~~v~~n~~~~~fvsas~----Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~- 224 (423)
T KOG0313|consen 150 VAWVIKNSSSCLFVSASM----DQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVET- 224 (423)
T ss_pred eEEEecCCccceEEEecC----CceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCC-
Confidence 9886544 35999998 99999999887743 33345999999999999999998 55599999999332
Q ss_pred ceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECC
Q 000316 1404 KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDIN 1483 (1678)
Q Consensus 1404 ~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~ 1483 (1678)
.....+...+..... ....-........+....+|...|.++.|.+ ...+.+++.|.+|+.||+.
T Consensus 225 ~~~~~~E~~s~~rrk----~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-----------~~v~yS~SwDHTIk~WDle 289 (423)
T KOG0313|consen 225 DEEDELESSSNRRRK----KQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-----------ATVIYSVSWDHTIKVWDLE 289 (423)
T ss_pred Cccccccccchhhhh----hhhhhhcccccCceEEecccccceeeEEEcC-----------CCceEeecccceEEEEEee
Confidence 222222221110000 0000011112223344456666666666653 5688999999999999999
Q ss_pred CCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCc---EEEEEeccCCCeEEE
Q 000316 1484 QGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN---VIASWRAHDGYVTKL 1560 (1678)
Q Consensus 1484 tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~---~i~~l~gH~~~V~sv 1560 (1678)
+|..+.++.+. ....|+... +...+||+|+.|..+++||.|++. ...++.||+++|.+|
T Consensus 290 tg~~~~~~~~~-------ksl~~i~~~-----------~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssv 351 (423)
T KOG0313|consen 290 TGGLKSTLTTN-------KSLNCISYS-----------PLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSV 351 (423)
T ss_pred cccceeeeecC-------cceeEeecc-----------cccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhhe
Confidence 99988777643 235666654 334699999999999999999863 457889999999999
Q ss_pred E-cCCC-CEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEEEEecC-CEEEEEeCCC-eEEEecC
Q 000316 1561 A-APED-HLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWG-QDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1561 a-spdg-~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~afSpdg-~~LaSgs~D~-I~vwdl~ 1624 (1678)
. +|.. ..|+|||.|+++++||+++.+ .+++.+.+|.+.|.++.++. ..++|||.|+ |+++.-.
T Consensus 352 kwsp~~~~~~~S~S~D~t~klWDvRS~k-~plydI~~h~DKvl~vdW~~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 352 KWSPTNEFQLVSGSYDNTVKLWDVRSTK-APLYDIAGHNDKVLSVDWNEGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred ecCCCCceEEEEEecCCeEEEEEeccCC-CcceeeccCCceEEEEeccCCceEEeccCcceEEEeccc
Confidence 9 6654 589999999999999999974 47899999999999988875 4899999999 9998743
No 91
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.4e-32 Score=295.52 Aligned_cols=210 Identities=20% Similarity=0.221 Sum_probs=185.3
Q ss_pred cccccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCC
Q 000316 156 SCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHP 235 (1678)
Q Consensus 156 ~~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~Hp 235 (1678)
......++|++.+.||+|-||.||+|+.+ +++-+||+|++.+...........++ ||++|-..|+||
T Consensus 16 ~~~~~l~dfeigr~LgkgkFG~vYlarek------ks~~IvalKVlfKsqi~~~~v~~qlr-------REiEIqs~L~hp 82 (281)
T KOG0580|consen 16 TKTWTLDDFEIGRPLGKGKFGNVYLAREK------KSLFIVALKVLFKSQILKTQVEHQLR-------REIEIQSHLRHP 82 (281)
T ss_pred ccccchhhccccccccCCccccEeEeeec------cCCcEEEEeeeeHHHHHHhcchhhhh-------heeEeecccCCc
Confidence 34455789999999999999999999965 67899999999887766666666665 999999999999
Q ss_pred cccceeeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 236 NVAPVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 236 NIV~l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
||+++|++|.++..+|+++||.+ |+|...++..+...+++..+..|++|++.||.|||.++||||||||+|+|++.++
T Consensus 83 nilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~- 161 (281)
T KOG0580|consen 83 NILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAG- 161 (281)
T ss_pred cHHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCC-
Confidence 99999999999999999999999 7999999977788899999999999999999999999999999999999999999
Q ss_pred eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCC
Q 000316 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1678)
Q Consensus 315 ~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs 394 (1678)
.+||+|||-+.... ....++-| ||..|.+||+..+..++..+|.|..|.+. ||+|+...+|...+
T Consensus 162 -~lkiAdfGwsV~~p-------~~kR~tlc------gt~dyl~pEmv~~~~hd~~Vd~w~lgvl~-yeflvg~ppFes~~ 226 (281)
T KOG0580|consen 162 -ELKIADFGWSVHAP-------SNKRKTLC------GTLDYLPPEMVEGRGHDKFVDLWSLGVLC-YEFLVGLPPFESQS 226 (281)
T ss_pred -CeeccCCCceeecC-------CCCceeee------cccccCCHhhcCCCCccchhhHHHHHHHH-HHHHhcCCchhhhh
Confidence 89999999987543 12223334 79999999999999999999999999665 99999887777654
No 92
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.97 E-value=3.3e-30 Score=282.77 Aligned_cols=280 Identities=18% Similarity=0.300 Sum_probs=237.4
Q ss_pred hhhccccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCCCce--eEEeccccccEEEEEEecCCCEEEEEec
Q 000316 1272 RQEATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKASI--LSSIRAHHGALRSVAVGQDECTVFTAGI 1347 (1678)
Q Consensus 1272 ~~~~~~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~~~~--l~tl~gH~~~V~svafspdg~~LaSgS~ 1347 (1678)
...+...+.||++.|+. |+|+|.. ||||+.|..|.+|+..|.+ ..+++||+++|..+.|..|+..|+|+|.
T Consensus 36 l~ap~m~l~gh~geI~~~~F~P~gs~-----~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gt 110 (338)
T KOG0265|consen 36 LQAPIMLLPGHKGEIYTIKFHPDGSC-----FASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGT 110 (338)
T ss_pred ccchhhhcCCCcceEEEEEECCCCCe-----EeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecC
Confidence 34567789999999995 9999998 9999999999999988654 5678899999999999999999999998
Q ss_pred CCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE---EeCCCcEEEEECCCCceeEEecccCccccccCCCCC
Q 000316 1348 GPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI---ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSS 1424 (1678)
Q Consensus 1348 d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l---aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~ 1424 (1678)
|++|+.||+++|++++.+++|.+-|++++-..-+..+ +|.|||+|+||.++..+++++...
T Consensus 111 ----Dk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~k------------ 174 (338)
T KOG0265|consen 111 ----DKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENK------------ 174 (338)
T ss_pred ----CceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccc------------
Confidence 9999999999999999999999999999844334444 455999999999998888777532
Q ss_pred CccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcc
Q 000316 1425 SISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLV 1504 (1678)
Q Consensus 1425 ~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V 1504 (1678)
. .++++.|...+..+.+|+-|+.|++||++.+..++++.||. ..|
T Consensus 175 -------------------y----------qltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~------DtI 219 (338)
T KOG0265|consen 175 -------------------Y----------QLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHA------DTI 219 (338)
T ss_pred -------------------e----------eEEEEEecccccceeeccccCceeeeccccCcceEEeeccc------Cce
Confidence 1 24555555668999999999999999999999999999765 456
Q ss_pred eEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCC----CcEEEEEeccCC--CeEEE--E-cCCCCEEEEEeCCC
Q 000316 1505 SAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRS----GNVIASWRAHDG--YVTKL--A-APEDHLLVSSSLDK 1575 (1678)
Q Consensus 1505 ~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~t----g~~i~~l~gH~~--~V~sv--a-spdg~~LaSgS~Dg 1575 (1678)
+.+..+ ++|.++.+-+.|.++++||++- ..++..+.+|.. ..+.+ + +|+++.+.+||.|+
T Consensus 220 t~lsls-----------~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr 288 (338)
T KOG0265|consen 220 TGLSLS-----------RYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADR 288 (338)
T ss_pred eeEEec-----------cCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCccccccccc
Confidence 777654 5667999999999999999985 346888887643 33433 3 89999999999999
Q ss_pred cEEEEEcCCCCCCCCeEeecCCCCEEE--EEecCCEEEEEeCCC-eEE
Q 000316 1576 TLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGL 1620 (1678)
Q Consensus 1576 tI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~v 1620 (1678)
.+++||.... ..++.+.||.+.|++ |+|....+.+++.|+ |.+
T Consensus 289 ~vyvwd~~~r--~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~l 334 (338)
T KOG0265|consen 289 FVYVWDTTSR--RILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYL 334 (338)
T ss_pred eEEEeecccc--cEEEEcCCcceeEEEeeecCCCcEEEEeccCceeEe
Confidence 9999999776 678899999999994 999999999999998 775
No 93
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.97 E-value=7.3e-31 Score=316.23 Aligned_cols=146 Identities=16% Similarity=0.207 Sum_probs=124.3
Q ss_pred eeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh--HHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEE
Q 000316 167 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG--QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLL 244 (1678)
Q Consensus 167 ~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~ 244 (1678)
++.||+|+||.||+|++.. ....+..||+|.+.+..... .....+. +|+.+|+.++||||++++++|
T Consensus 1 ~~~lg~G~~g~V~~~~~~~---~~~~~~~~avK~~~~~~~~~~~~~~~~~~--------~E~~il~~l~hp~iv~~~~~~ 69 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVT---GADTGKIFAMKVLKKATIVRNQKDTAHTK--------AERNILEAVKHPFIVDLIYAF 69 (323)
T ss_pred CceeeecCCeEEEEEEEcc---cCCCCCEEEEEEEEHHHHHhhhhhHHHHH--------HHHHHHHhCCCCchhceeeEE
Confidence 3689999999999998532 12468899999987542211 1112222 899999999999999999999
Q ss_pred EeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecC
Q 000316 245 KTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1678)
Q Consensus 245 ~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFG 323 (1678)
..++.+|+||||++| +|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||
T Consensus 70 ~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~kl~Dfg 145 (323)
T cd05584 70 QTGGKLYLILEYLSGGELFMHLE--REGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQG--HVKLTDFG 145 (323)
T ss_pred ecCCeEEEEEeCCCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--CEEEeeCc
Confidence 999999999999995 9999997 456788999999999999999999999999999999999999999 89999999
Q ss_pred Cccc
Q 000316 324 LVGF 327 (1678)
Q Consensus 324 lA~~ 327 (1678)
+++.
T Consensus 146 ~~~~ 149 (323)
T cd05584 146 LCKE 149 (323)
T ss_pred CCee
Confidence 9874
No 94
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.97 E-value=1.3e-30 Score=313.99 Aligned_cols=147 Identities=17% Similarity=0.130 Sum_probs=126.4
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH-HHHHHHhcCCCchhHHHhhccC-CCCcccce
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCL-RHPNVAPV 240 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~l 240 (1678)
+|++++.||+|+||.||+|++. .++..+|+|.+.+....... ..... .|..++..+ +||+|+++
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~i~~~ 66 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERK------GTDELYAIKILKKDVVIQDDDVECTM--------VEKRVLALSGKPPFLTQL 66 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhccCCCeEeeE
Confidence 5899999999999999999964 46789999999764322222 22222 788888777 57999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+.+.+|+||||++ |+|.+.+. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~E~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~--~~kL 142 (323)
T cd05616 67 HSCFQTMDRLYFVMEYVNGGDLMYQIQ--QVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEG--HIKI 142 (323)
T ss_pred EEEEecCCEEEEEEcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCC--cEEE
Confidence 999999999999999998 59999987 455689999999999999999999999999999999999999999 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||+++.
T Consensus 143 ~DfG~~~~ 150 (323)
T cd05616 143 ADFGMCKE 150 (323)
T ss_pred ccCCCcee
Confidence 99999874
No 95
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=2e-29 Score=330.40 Aligned_cols=188 Identities=13% Similarity=0.086 Sum_probs=150.5
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
+++|+++++||+|+||.||+|++. .++..||||++.............+. +|+.+++.++||||+++
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~------~~~~~vAiKvi~~~~~~~~~~~~~~~-------~E~~~l~~l~hp~Iv~~ 69 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKK------NNSKLYAVKVVKKADMINKNMVHQVQ-------AERDALALSKSPFIVHL 69 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEEC------CCCcEEEEEEEehhhccCHHHHHHHH-------HHHHHHHhcCCCCcCeE
Confidence 578999999999999999999964 46889999999764433333333332 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++...+.+||||||++| +|.+++. ..+.+++..++.++.||+.||.|||++|||||||||+||||+.++ .+||
T Consensus 70 ~~~~~~~~~~~lVmEy~~g~~L~~li~--~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g--~vkL 145 (669)
T cd05610 70 YYSLQSANNVYLVMEYLIGGDVKSLLH--IYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEG--HIKL 145 (669)
T ss_pred EEEEEECCEEEEEEeCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCC--CEEE
Confidence 9999999999999999985 9999997 345688999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCccccccccccccc-ccccccccccC
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD-WHSQFNRWWRG 376 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~-y~~~~d~W~~G 376 (1678)
+|||+++........ .....+|+.|++||...... -....+.|..|
T Consensus 146 ~DFGls~~~~~~~~~-----------~~~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g 192 (669)
T cd05610 146 TDFGLSKVTLNRELN-----------MMDILTTPSMAKPKNDYSRTPGQVLSLISSLG 192 (669)
T ss_pred EeCCCCccccCCccc-----------ccccccCccccCccccccCCCCceeeeeeecC
Confidence 999999964421110 11234788999999543222 22244555555
No 96
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.97 E-value=9.3e-31 Score=316.18 Aligned_cols=143 Identities=20% Similarity=0.212 Sum_probs=124.1
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccceeeEEEe
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLKT 246 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~l~~~~~~ 246 (1678)
+.||+|+||.||+|+++ .++..||+|++++.........+.+. +|+.+++.+ +||||++++++|.+
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~-------~e~~il~~~~~hp~Iv~~~~~~~~ 67 (329)
T cd05588 1 RVIGRGSYAKVLLVELK------KTRRIYAMKVIKKELVNDDEDIDWVQ-------TEKHVFETASNHPFLVGLHSCFQT 67 (329)
T ss_pred CeEeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH-------HHHHHHHhccCCCCCCceEEEEEc
Confidence 47999999999999965 46789999999864333332223332 899999888 79999999999999
Q ss_pred CCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCc
Q 000316 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1678)
Q Consensus 247 ~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA 325 (1678)
.+.+|+||||++| +|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 68 ~~~~~lv~e~~~~g~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~--~~kL~Dfg~~ 143 (329)
T cd05588 68 ESRLFFVIEFVSGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEG--HIKLTDYGMC 143 (329)
T ss_pred CCEEEEEEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--CEEECcCccc
Confidence 9999999999995 9998887 456789999999999999999999999999999999999999999 8999999998
Q ss_pred cc
Q 000316 326 GF 327 (1678)
Q Consensus 326 ~~ 327 (1678)
+.
T Consensus 144 ~~ 145 (329)
T cd05588 144 KE 145 (329)
T ss_pred cc
Confidence 74
No 97
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.97 E-value=2.9e-29 Score=281.47 Aligned_cols=324 Identities=16% Similarity=0.203 Sum_probs=266.2
Q ss_pred hhccccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCC
Q 000316 1273 QEATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGP 1349 (1678)
Q Consensus 1273 ~~~~~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~ 1349 (1678)
....+++.+|++.|++ .+|+..| +|||+.|....||++. |..+..+.||+++|.++.||.||.+||||+.
T Consensus 54 DdS~~tF~~H~~svFavsl~P~~~l-----~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdm-- 126 (399)
T KOG0296|consen 54 DDSLVTFDKHTDSVFAVSLHPNNNL-----VATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDM-- 126 (399)
T ss_pred ccceeehhhcCCceEEEEeCCCCce-----EEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCC--
Confidence 4557889999999997 6776776 9999999999999998 7899999999999999999999999999998
Q ss_pred CCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCcc
Q 000316 1350 GFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSIS 1427 (1678)
Q Consensus 1350 ~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~ 1427 (1678)
+|.|+||+..++.....+-+--+.+.-++|+|....+ ++.||.|..|.+.++...+.+.+|...
T Consensus 127 --sG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~------------ 192 (399)
T KOG0296|consen 127 --SGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSP------------ 192 (399)
T ss_pred --CccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCC------------
Confidence 8999999999999888887667778889999988777 455999999999987777778765322
Q ss_pred ccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEE
Q 000316 1428 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAI 1507 (1678)
Q Consensus 1428 ~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sv 1507 (1678)
++|=.+.|+|+.+++|..||+|++||+.+|++++........ .-.++
T Consensus 193 ----------------------------ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~-----~~~~~ 239 (399)
T KOG0296|consen 193 ----------------------------CTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGL-----ELPCI 239 (399)
T ss_pred ----------------------------cccccccCCCceEEEEecCceEEEEecCCCceeEEecccccC-----cCCcc
Confidence 455567788999999999999999999999999988754421 11222
Q ss_pred EeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEe--------ccCCCeEEEE----cCCCCEEEEEeCCC
Q 000316 1508 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR--------AHDGYVTKLA----APEDHLLVSSSLDK 1575 (1678)
Q Consensus 1508 a~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~--------gH~~~V~sva----spdg~~LaSgS~Dg 1575 (1678)
+...++..+.+|+.++.+++-...+|+.+.... .+...+.+|. +..=.+.|+|+.||
T Consensus 240 -----------~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG 308 (399)
T KOG0296|consen 240 -----------SLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDG 308 (399)
T ss_pred -----------ccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccc
Confidence 223556789999999999999999999988877 4566666666 33346889999999
Q ss_pred cEEEEEcCCCCCCCCeEeecCCCCEEEEEecC-CEEEEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCCCccCcE
Q 000316 1576 TLRIWDLRRNWPSQPTVFKGHTNGISGFSVWG-QDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVL 1653 (1678)
Q Consensus 1576 tI~IWDl~~~~~~~~~~l~gH~~~V~afSpdg-~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I 1653 (1678)
+|.|||+..... ...-.|..+|..+-+.+ .+|++++.|+ |+.||.. .|+. .-... +|...|
T Consensus 309 ~i~iyD~a~~~~---R~~c~he~~V~~l~w~~t~~l~t~c~~g~v~~wDaR-----tG~l-------~~~y~--GH~~~I 371 (399)
T KOG0296|consen 309 TIAIYDLAASTL---RHICEHEDGVTKLKWLNTDYLLTACANGKVRQWDAR-----TGQL-------KFTYT--GHQMGI 371 (399)
T ss_pred eEEEEecccchh---heeccCCCceEEEEEcCcchheeeccCceEEeeecc-----ccce-------EEEEe--cCchhe
Confidence 999999988632 34556888899755555 8899999999 9999953 3443 22222 599999
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1654 SSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1654 ~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
.+++++|++++++|+|+|++.+||+
T Consensus 372 l~f~ls~~~~~vvT~s~D~~a~VF~ 396 (399)
T KOG0296|consen 372 LDFALSPQKRLVVTVSDDNTALVFE 396 (399)
T ss_pred eEEEEcCCCcEEEEecCCCeEEEEe
Confidence 9999999999999999999999985
No 98
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.97 E-value=1.3e-30 Score=313.01 Aligned_cols=142 Identities=15% Similarity=0.116 Sum_probs=121.1
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh-HHHHHHHHhcCCCchhHHHhhccC-CCCcccceeeEEE
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLK 245 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~l~~~~~ 245 (1678)
+.||+|+||.||+|+++ .++..||+|.+++..... ....... .|..++..+ +||||+++++++.
T Consensus 1 ~~lg~G~~g~V~~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~i~~~~~~~~ 66 (316)
T cd05620 1 KVLGKGSFGKVLLAELK------GKGEYFAVKALKKDVVLIDDDVECTM--------VEKRVLALAWENPFLTHLYCTFQ 66 (316)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhcchHHHHH--------HHHHHHHhccCCCCccCeeEEEE
Confidence 47999999999999965 467899999997642211 1122222 788888754 8999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
+++.+|+||||++| +|..++. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~E~~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~--~~kl~Dfg~ 142 (316)
T cd05620 67 TKEHLFFVMEFLNGGDLMFHIQ--DKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDG--HIKIADFGM 142 (316)
T ss_pred eCCEEEEEECCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--CEEeCccCC
Confidence 99999999999995 9999987 456689999999999999999999999999999999999999999 899999999
Q ss_pred ccc
Q 000316 325 VGF 327 (1678)
Q Consensus 325 A~~ 327 (1678)
++.
T Consensus 143 ~~~ 145 (316)
T cd05620 143 CKE 145 (316)
T ss_pred Cee
Confidence 873
No 99
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.97 E-value=1.1e-30 Score=314.45 Aligned_cols=142 Identities=15% Similarity=0.133 Sum_probs=121.8
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH-HHHHHHHhcCCCchhHHHhhccC-CCCcccceeeEEE
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLK 245 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~l~~~~~ 245 (1678)
+.||+|+||.||+|++. .++..||+|.+.+...... ....+. .|.++++.+ +||||++++++|.
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~il~~~~~hp~i~~~~~~~~ 66 (321)
T cd05591 1 KVLGKGSFGKVMLAELK------GTDEVYAIKVLKKDVILQDDDVDCTM--------TEKRILALAAKHPFLTALHCCFQ 66 (321)
T ss_pred CccccCCCeEEEEEEEC------CCCCEEEEEEEeHHHhhhhhHHHHHH--------HHHHHHHhccCCCCccceeeEEE
Confidence 46999999999999964 4678999999876432222 222233 788888866 7999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
+++.+|+||||++| +|...+. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~E~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~--~~kL~Dfg~ 142 (321)
T cd05591 67 TKDRLFFVMEYVNGGDLMFQIQ--RSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEG--HCKLADFGM 142 (321)
T ss_pred cCCeEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEEEeeccc
Confidence 99999999999995 9999987 456689999999999999999999999999999999999999999 899999999
Q ss_pred ccc
Q 000316 325 VGF 327 (1678)
Q Consensus 325 A~~ 327 (1678)
++.
T Consensus 143 ~~~ 145 (321)
T cd05591 143 CKE 145 (321)
T ss_pred cee
Confidence 874
No 100
>PTZ00284 protein kinase; Provisional
Probab=99.97 E-value=1.4e-30 Score=329.43 Aligned_cols=183 Identities=16% Similarity=0.207 Sum_probs=135.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC------C
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR------H 234 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~------H 234 (1678)
.++|+++++||+|+||.||+|.+. ..+..||||+++..... ..+.. +|+.+++.++ |
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~------~~~~~vAvK~i~~~~~~---~~~~~--------~e~~~l~~l~~~~~~~~ 190 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDR------KRKEYCAVKIVRNVPKY---TRDAK--------IEIQFMEKVRQADPADR 190 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEc------CCCeEEEEEEEecchhh---HHHHH--------HHHHHHHHHhhcCcccC
Confidence 468999999999999999999964 46788999998642111 11122 5666665554 4
Q ss_pred CcccceeeEEEeC-CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCCeEecCC
Q 000316 235 PNVAPVLGLLKTS-GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDS 312 (1678)
Q Consensus 235 pNIV~l~~~~~~~-~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~ 312 (1678)
++|++++++|..+ ..+|+|||++.++|.+++. +.+.+++..++.++.||+.||+|||+ .|||||||||+|||++.+
T Consensus 191 ~~i~~i~~~~~~~~~~~~iv~~~~g~~l~~~l~--~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~ 268 (467)
T PTZ00284 191 FPLMKIQRYFQNETGHMCIVMPKYGPCLLDWIM--KHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETS 268 (467)
T ss_pred cceeeeEEEEEcCCceEEEEEeccCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecC
Confidence 5689999999865 4789999999889999987 35678999999999999999999998 599999999999999876
Q ss_pred Cc--------------eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccC
Q 000316 313 CW--------------SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 376 (1678)
Q Consensus 313 g~--------------~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G 376 (1678)
+. ..+||+|||.+...... .....||+.|||||++.+..|+.++|+|+.|
T Consensus 269 ~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~--------------~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlG 332 (467)
T PTZ00284 269 DTVVDPVTNRALPPDPCRVRICDLGGCCDERHS--------------RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMG 332 (467)
T ss_pred CcccccccccccCCCCceEEECCCCccccCccc--------------cccccCCccccCcHHhhcCCCCcHHHHHHHH
Confidence 51 14899999987632210 0112367788888876443333333333333
No 101
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.97 E-value=3.4e-30 Score=311.57 Aligned_cols=148 Identities=18% Similarity=0.226 Sum_probs=129.8
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||+|+||.||++++. .++..+|+|.+.... ......++. +|+++|+.++||||+++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~~a~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~ 68 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHK------PSGLIMARKLIHLEI-KPAIRNQII--------RELQVLHECNSPYIVGF 68 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEEC------CCCcEEEEEEeeccc-CHHHHHHHH--------HHHHHHHHCCCCCCCeE
Confidence 468999999999999999999965 467889999987532 222223344 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCCeEecCCCceeEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSL-GIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
++++..++.+++||||++| +|.+++. ....+++..+..++.|++.||.|||++ +|+||||||+|||++.++ .+|
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~--~~k 144 (331)
T cd06649 69 YGAFYSDGEISICMEHMDGGSLDQVLK--EAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRG--EIK 144 (331)
T ss_pred EEEEEECCEEEEEeecCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCC--cEE
Confidence 9999999999999999995 9999998 345689999999999999999999986 699999999999999999 899
Q ss_pred EEecCCccc
Q 000316 319 ICDKPLVGF 327 (1678)
Q Consensus 319 L~DFGlA~~ 327 (1678)
|+|||+++.
T Consensus 145 l~Dfg~~~~ 153 (331)
T cd06649 145 LCDFGVSGQ 153 (331)
T ss_pred EccCccccc
Confidence 999999874
No 102
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.97 E-value=2.6e-30 Score=307.96 Aligned_cols=150 Identities=20% Similarity=0.245 Sum_probs=130.6
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|+++++||+|+||.||+|+++ .++..||+|.+....... ....+. +|+.+++.++||||++
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~------~~~~~vaiK~~~~~~~~~-~~~~~~--------~E~~~l~~l~h~nI~~ 68 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSK------LTDNLVALKEIRLEHEEG-APCTAI--------REVSLLKDLKHANIVT 68 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEc------CCCcEEEEEEEecccccC-chhHHH--------HHHHHHHhcCCCCcce
Confidence 3678999999999999999999865 467889999987543222 112223 8999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
+++++..++..++||||++++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 69 ~~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~--~~kl 145 (301)
T cd07873 69 LHDIIHTEKSLTLVFEYLDKDLKQYLDD-CGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERG--ELKL 145 (301)
T ss_pred EEEEEecCCeEEEEEeccccCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCC--cEEE
Confidence 9999999999999999999999999874 344688999999999999999999999999999999999999999 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||+++.
T Consensus 146 ~dfg~~~~ 153 (301)
T cd07873 146 ADFGLARA 153 (301)
T ss_pred CcCcchhc
Confidence 99999863
No 103
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.97 E-value=1.8e-30 Score=316.78 Aligned_cols=145 Identities=22% Similarity=0.268 Sum_probs=124.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|+.+++||+|+||.||+|++. .+++.||||++.... .......+. +|+++|+.++|+||+++
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~ 137 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHR------PTGRLYALKVIYGNH-EDTVRRQIC--------REIEILRDVNHPNVVKC 137 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEEC------CCCCEEEEEEEecCC-cHHHHHHHH--------HHHHHHHhCCCCCccee
Confidence 567999999999999999999964 467899999986532 222223333 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++..++.+|+||||+++ +|.+. ....+..+..++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 138 ~~~~~~~~~~~lv~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~--~~kL 209 (353)
T PLN00034 138 HDMFDHNGEIQVLLEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAK--NVKI 209 (353)
T ss_pred eeEeccCCeEEEEEecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC--CEEE
Confidence 9999999999999999995 77542 2356788889999999999999999999999999999999999 8999
Q ss_pred EecCCcccC
Q 000316 320 CDKPLVGFN 328 (1678)
Q Consensus 320 ~DFGlA~~~ 328 (1678)
+|||+++..
T Consensus 210 ~DfG~~~~~ 218 (353)
T PLN00034 210 ADFGVSRIL 218 (353)
T ss_pred cccccceec
Confidence 999999753
No 104
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.97 E-value=1.8e-30 Score=313.98 Aligned_cols=151 Identities=15% Similarity=0.100 Sum_probs=129.9
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|+++++||+|+||.||+++++ .++..+|+|.+.+.........+.++ +|+.++..++|+||++++
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~~~~~~i~~~~ 67 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLK------NADKVFAMKILNKWEMLKRAETACFR-------EERDVLVNGDNQWITTLH 67 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEEC------CCCCEEEEEEEeHHHHHHhhHHHHHH-------HHHHHHhhCCCCCEeeEE
Confidence 47999999999999999999965 46788999998653222222223232 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++.+.+.+|+||||++ |+|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~--~~kL~ 144 (332)
T cd05623 68 YAFQDENNLYLVMDYYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNG--HIRLA 144 (332)
T ss_pred EEEecCCEEEEEEeccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC--CEEEe
Confidence 99999999999999998 599999983 245689999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccC
Q 000316 321 DKPLVGFN 328 (1678)
Q Consensus 321 DFGlA~~~ 328 (1678)
|||+++..
T Consensus 145 DfG~a~~~ 152 (332)
T cd05623 145 DFGSCLKL 152 (332)
T ss_pred ecchheec
Confidence 99998743
No 105
>KOG1786 consensus Lysosomal trafficking regulator LYST and related BEACH and WD40 repeat proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=5.6e-33 Score=368.59 Aligned_cols=241 Identities=40% Similarity=0.626 Sum_probs=200.1
Q ss_pred ccccccccccCccchhhhHhhhccccCCCCCCCcCCcccceEecCC-CC-CCCCCCCcCccCCcchhhhcc-cccchhcc
Q 000316 366 WHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFS-TK-PDENFDSGSRDLSKSKWRLAK-GDEQLDFT 442 (1678)
Q Consensus 366 y~~~~d~W~~G~isnfeyL~~ln~~aGRs~~dl~q~pv~pwv~d~~-~~-~~~~~~~~~rdLskp~~~l~~-~~~~~~~~ 442 (1678)
....+..|..|+++||+|+|.+|.++||+++|+.|||||||+++++ .. .+..+|..+|++.|+++.... +.++....
T Consensus 335 ~~s~~~~W~~~~~~n~~yl~~ln~l~~r~~~~~~~~pi~pw~~~~~~~~~l~~~d~~~~r~~~~~~~~~s~e~~~~~~~r 414 (1081)
T KOG1786|consen 335 LKSAFGRWLSGELENFQYLMHLNTLAGRSIADLAQYPIFPWVLAFYDFSGLDLLDPLTARKLLKLGGHQSDEGYERFAKR 414 (1081)
T ss_pred hhhhhcccccCchhhhhhhhhcCcccccchhhhccCcccceeeccccccchhhcChHhhhhhhhccCCCCHHHHHHHhhh
Confidence 5678899999999999999999999999999999999999999554 33 488899999999999843221 11222233
Q ss_pred cCC------CCCCcccCccccCcceeeeeecccCchhHHHHHhhcccCCCCccchHHHhhcCCCc----------ccccc
Q 000316 443 YSS------SEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWTPD----------ECIPE 506 (1678)
Q Consensus 443 ~~~------~~~~~h~~~~~~s~~~v~~y~~r~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----------EliPe 506 (1678)
|+. ....+||.++++|+++++.|++|..|++.++..++.+|.+..++..++++..|++. |+|||
T Consensus 415 ~~~~~d~~~~~~~~~~~t~~~S~~~~~~y~~r~~p~~~~~~~i~~~~~~~~d~~~~s~~~~Wt~~~~~~~~~~i~eli~~ 494 (1081)
T KOG1786|consen 415 FEEWLDQNAEDPLFHVLTHLLSPLIVMSYFARKNPLSELFLSIRRGYFPIADRLFHSRMQAWTPDEKGNLHSCIKELIPK 494 (1081)
T ss_pred hhhhhccccccccccccccccchhhhhhhhhhcCcchHHHHHhhcccccccchhhhhhhcccCcccccccchhHHHHHHH
Confidence 322 22348999999999999999999999999999999999988888788888888765 47888
Q ss_pred cccCCccccc-------CCCC---CCCeecCCCCC-CHHHHHHHHHHhhcchHHHccCCCccccc-cccCCCchhhHhcC
Q 000316 507 FYCDPQIFYS-------QHPG---MTDLAVPPWAG-SPEEFIKLHRDALESDRVSSRIHHWIDIT-FGYKMSGQAAIDAK 574 (1678)
Q Consensus 507 ff~~p~~~~~-------~~~~---~~dv~lP~Wa~-~~~~Fi~~~r~aLEs~~Vs~~l~~WIDli-fG~kq~g~~a~~~~ 574 (1678)
||++|+||.| .+.. ++||.|||||. +|++||++||+|||++|||++||+|||++ |||||.|++|+++.
T Consensus 495 ~~~~p~~l~n~~~~~lg~~~~~~~~~~~~lP~ws~~~~~~fi~~h~~ale~~~vs~~Lh~wId~~~fgykq~g~~~~~~~ 574 (1081)
T KOG1786|consen 495 FVNDPSFLENSVILDLGEKQNGDSVDDVILPPWSSSSPREFIRDHRKALESNRVSQRLHHWIDLTIFGYKQNGSAAVIAM 574 (1081)
T ss_pred hccChHHHhhhhhhhhhhhcccccccceecCcccccCHHHHHHHHhhcccccchhhccccceeeehhhhhhcchHHHHHH
Confidence 8899999998 3333 89999999998 79999999999999999999999999999 99999999999999
Q ss_pred CCCC----CCCCC-----------Cc-------ccccC--cCcccCCCCCCCCCCc
Q 000316 575 NVML----PSSEP-----------TK-------PKSVG--RLQLFTQPHPVRQTAT 606 (1678)
Q Consensus 575 Nv~~----~~~~~-----------~~-------~~~~g--~~qlf~~pHp~r~~~~ 606 (1678)
|||+ +..+. .+ ...+| |+|+|.++||.+....
T Consensus 575 nv~~~~~~~l~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~~~h~~~~~~~ 630 (1081)
T KOG1786|consen 575 NVFLVSNKHLFYVNSVLNLRGYDPLEQNILIVSNNHFKQTIKQLFPKKHSVSELTE 630 (1081)
T ss_pred HHHhhhhhhhccccchhhhcccchhhhhhhHHHhhccccchhhcccccccccccch
Confidence 9999 65421 11 11234 7999999999996554
No 106
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.97 E-value=1.9e-30 Score=311.75 Aligned_cols=142 Identities=18% Similarity=0.165 Sum_probs=120.4
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH-HHHHHHHhcCCCchhHHHhhcc-CCCCcccceeeEEE
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGC-LRHPNVAPVLGLLK 245 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~l~~~~~~~~~Ei~iL~~-l~HpNIV~l~~~~~ 245 (1678)
+.||+|+||.||+|++. .++..||+|.++....... ...... .|..++.. .+||||+++++++.
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~hp~i~~~~~~~~ 66 (316)
T cd05592 1 KVLGKGSFGKVMLAELK------GTNEFFAIKALKKDVVLEDDDVECTM--------VERRVLALAWEHPFLTHLFCTFQ 66 (316)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhhHHHHH--------HHHHHHHhccCCCCccceeeEEE
Confidence 47999999999999964 4678899999976432221 222222 67777765 48999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
.++.+|+||||++| +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~gg~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~--~~kL~Dfg~ 142 (316)
T cd05592 67 TKEHLFFVMEYLNGGDLMFHIQ--SSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDG--HIKIADFGM 142 (316)
T ss_pred cCCEEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCC--CEEEccCcC
Confidence 99999999999985 9999987 345689999999999999999999999999999999999999999 899999999
Q ss_pred ccc
Q 000316 325 VGF 327 (1678)
Q Consensus 325 A~~ 327 (1678)
++.
T Consensus 143 a~~ 145 (316)
T cd05592 143 CKE 145 (316)
T ss_pred CeE
Confidence 974
No 107
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=9.9e-30 Score=305.51 Aligned_cols=359 Identities=17% Similarity=0.237 Sum_probs=266.9
Q ss_pred ccccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC--CceeEEeccccccEEEEEEecCCCEEEEEecCCC
Q 000316 1275 ATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK--ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPG 1350 (1678)
Q Consensus 1275 ~~~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~--~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~ 1350 (1678)
-...+.||.+-|++ |.|+-.. ..|++|+.|+++++||+. ..++.++++|.+.|++++|++|+..++++|.
T Consensus 139 ~th~fkG~gGvVssl~F~~~~~~---~lL~sg~~D~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~~R--- 212 (775)
T KOG0319|consen 139 CTHSFKGHGGVVSSLLFHPHWNR---WLLASGATDGTVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELLSVGR--- 212 (775)
T ss_pred EEEEecCCCceEEEEEeCCccch---hheeecCCCceEEEEEcccCchHHHHHHhhhhheeeeeeccCCceEEEecc---
Confidence 45678999999997 7666543 459999999999999998 3478999999999999999999999999997
Q ss_pred CCCeEEEEeCC----------------------------------------------CCe--------------------
Q 000316 1351 FKGTVQKWELT----------------------------------------------RIN-------------------- 1364 (1678)
Q Consensus 1351 ~DgtVrlWDl~----------------------------------------------tg~-------------------- 1364 (1678)
|+.+.|||+. +++
T Consensus 213 -Dkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~ 291 (775)
T KOG0319|consen 213 -DKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIE 291 (775)
T ss_pred -CcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhhcceecc
Confidence 7788888751 110
Q ss_pred -----------------------EEEEEecCCccEEEEeecC-CCCcE--EeCCCcEEEEECCCCceeEEecccCccccc
Q 000316 1365 -----------------------CVSGYYGHEEVVNDICVLS-SSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLH 1418 (1678)
Q Consensus 1365 -----------------------~l~~l~gH~~~V~sV~fs~-~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~ 1418 (1678)
....+-|-.+.|.+++|.. ....+ |+..+.+|++++.+..|. .+.+|......
T Consensus 292 ~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~-ii~GH~e~vlS 370 (775)
T KOG0319|consen 292 SMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQ-IIPGHTEAVLS 370 (775)
T ss_pred ccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceE-EEeCchhheee
Confidence 0111224456677777753 34444 677888888888887776 66666433111
Q ss_pred cC-----------CCCCCccccc--cc--c-ccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEEC
Q 000316 1419 GG-----------SPSSSISKIN--TD--Q-VGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDI 1482 (1678)
Q Consensus 1419 ~~-----------s~s~~~~~~~--~~--~-~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl 1482 (1678)
.. +.+.....+. +. . ..+-..++|++.|.++++... ....++++|.|+++++|++
T Consensus 371 L~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~---------~asffvsvS~D~tlK~W~l 441 (775)
T KOG0319|consen 371 LDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKL---------GASFFVSVSQDCTLKLWDL 441 (775)
T ss_pred eeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeeccc---------CccEEEEecCCceEEEecC
Confidence 11 1111111110 00 0 011122345555555555322 2457899999999999999
Q ss_pred CCCee---eEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEE
Q 000316 1483 NQGQK---LHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTK 1559 (1678)
Q Consensus 1483 ~tg~~---l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~s 1559 (1678)
...+. ...+........|...|+||+++ |+..++||||.|.+.+||++..+....++.||+..|++
T Consensus 442 ~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia-----------~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~ 510 (775)
T KOG0319|consen 442 PKSKETAFPIVLTCRYTERAHDKDINCVAIA-----------PNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWC 510 (775)
T ss_pred CCcccccccceehhhHHHHhhcccccceEec-----------CCCceEEecccccceeeecccCceEEEEeeCCccceEE
Confidence 86322 12222222223567789999986 44569999999999999999999999999999999999
Q ss_pred EE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE--EEEecCCEEEEEeCCC-eEEEecCCCCCCCCccee
Q 000316 1560 LA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRL 1635 (1678)
Q Consensus 1560 va-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~ 1635 (1678)
|. +++++.++|+|.|+||+||.+.+. .++.++.||+..|. +|-.+|+.|+||+.|| |++|++.. +.+.
T Consensus 511 V~Fs~~dq~laT~SgD~TvKIW~is~f--SClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt-----~eC~- 582 (775)
T KOG0319|consen 511 VSFSKNDQLLATCSGDKTVKIWSISTF--SCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKT-----NECE- 582 (775)
T ss_pred EEeccccceeEeccCCceEEEEEeccc--eeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccc-----hhhh-
Confidence 99 999999999999999999999998 78999999999999 5999999999999999 99999862 1111
Q ss_pred ccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1636 VPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1636 ~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
... ..|...|++++.+|+...++||+.||.|.+|
T Consensus 583 ---~tl-----D~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~w 616 (775)
T KOG0319|consen 583 ---MTL-----DAHNDRVWALSVSPLLDMFVTGGGDGRIIFW 616 (775)
T ss_pred ---hhh-----hhccceeEEEeecCccceeEecCCCeEEEEe
Confidence 111 2589999999999999999999999999999
No 108
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.97 E-value=4e-31 Score=292.18 Aligned_cols=272 Identities=14% Similarity=0.211 Sum_probs=223.1
Q ss_pred CCceEeecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCC
Q 000316 1283 EPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELT 1361 (1678)
Q Consensus 1283 ~~~V~~fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~ 1361 (1678)
...|+++-.|..- +++|+.|.+|++||.+ -.+++.+.||+|+|.|+.|.. +.++|||. |.||++||++
T Consensus 197 skgVYClQYDD~k-----iVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~--rviisGSS----DsTvrvWDv~ 265 (499)
T KOG0281|consen 197 SKGVYCLQYDDEK-----IVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYDE--RVIVSGSS----DSTVRVWDVN 265 (499)
T ss_pred CCceEEEEecchh-----hhcccccCceEEeccccHHHHHhhhcCCCcEEeeeccc--eEEEecCC----CceEEEEecc
Confidence 3567776655543 9999999999999988 568999999999999999965 49999998 9999999999
Q ss_pred CCeEEEEEecCCccEEEEeecCCCCcE-EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccC
Q 000316 1362 RINCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSN 1440 (1678)
Q Consensus 1362 tg~~l~~l~gH~~~V~sV~fs~~~~~l-aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~ 1440 (1678)
+|+++.++-+|...|..+.|+ ++-++ +|.|.+|.+||+.+..-+. -+....
T Consensus 266 tge~l~tlihHceaVLhlrf~-ng~mvtcSkDrsiaVWdm~sps~it---------------------------~rrVLv 317 (499)
T KOG0281|consen 266 TGEPLNTLIHHCEAVLHLRFS-NGYMVTCSKDRSIAVWDMASPTDIT---------------------------LRRVLV 317 (499)
T ss_pred CCchhhHHhhhcceeEEEEEe-CCEEEEecCCceeEEEeccCchHHH---------------------------HHHHHh
Confidence 999999999999999999984 33333 5559999999987543110 001112
Q ss_pred CCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcc
Q 000316 1441 TLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGA 1520 (1678)
Q Consensus 1441 ~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~ 1520 (1678)
+|-..|..+.|+ .++++++|.|.||++|++.+++.+.++.+|... |.|+.+
T Consensus 318 GHrAaVNvVdfd------------~kyIVsASgDRTikvW~~st~efvRtl~gHkRG------IAClQY----------- 368 (499)
T KOG0281|consen 318 GHRAAVNVVDFD------------DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRG------IACLQY----------- 368 (499)
T ss_pred hhhhheeeeccc------------cceEEEecCCceEEEEeccceeeehhhhccccc------ceehhc-----------
Confidence 344456666665 459999999999999999999999999987654 334332
Q ss_pred cCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCC-------CCeEe
Q 000316 1521 VASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPS-------QPTVF 1593 (1678)
Q Consensus 1521 ~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~~-------~~~~l 1593 (1678)
.|.++++||+|.+|++||+..|++++.++||+.-|.++.. |.+.++||+.||+|+|||+..+... ++.++
T Consensus 369 --r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRF-d~krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~l 445 (499)
T KOG0281|consen 369 --RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTL 445 (499)
T ss_pred --cCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheee-cCceeeeccccceEEEEecccccCCcccccchHHHhh
Confidence 4579999999999999999999999999999999999985 4568999999999999999886432 45567
Q ss_pred ecCCCCEEEEEecCCEEEEEeCCC-eEEEecCC
Q 000316 1594 KGHTNGISGFSVWGQDVISISNNK-IGLSSLSK 1625 (1678)
Q Consensus 1594 ~gH~~~V~afSpdg~~LaSgs~D~-I~vwdl~~ 1625 (1678)
..|++.|..+..|...+++++-|. |-+||..+
T Consensus 446 v~hsgRVFrLQFD~fqIvsssHddtILiWdFl~ 478 (499)
T KOG0281|consen 446 VEHSGRVFRLQFDEFQIISSSHDDTILIWDFLN 478 (499)
T ss_pred hhccceeEEEeecceEEEeccCCCeEEEEEcCC
Confidence 789999999999999999988877 99999864
No 109
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=99.97 E-value=4e-29 Score=267.41 Aligned_cols=264 Identities=14% Similarity=0.211 Sum_probs=217.5
Q ss_pred CEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE-EeCCCcEEEEECCCCce--eEEecccCccc
Q 000316 1340 CTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLHVWNSQTGKL--LSVFAEQSMDS 1416 (1678)
Q Consensus 1340 ~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l-aS~DgtVrIWD~~tg~~--~~~l~~~~~~~ 1416 (1678)
-+|+|+| ||.|||+|.+.||.|..+++--...|+.+.+.|+.+.| +.+...||+||+++++. +.++..|
T Consensus 11 viLvsA~----YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~qhvRlyD~~S~np~Pv~t~e~h---- 82 (311)
T KOG0315|consen 11 VILVSAG----YDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQHVRLYDLNSNNPNPVATFEGH---- 82 (311)
T ss_pred eEEEecc----CcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccCCeeEEEEccCCCCCceeEEecc----
Confidence 4677777 69999999999999999999777899999999999998 56689999999998764 5555543
Q ss_pred cccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCC
Q 000316 1417 LHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPT 1496 (1678)
Q Consensus 1417 ~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~ 1496 (1678)
... |+.+.|..+|+.+++|++||++||||+|...+.+.++
T Consensus 83 --------------------------~kN----------VtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~---- 122 (311)
T KOG0315|consen 83 --------------------------TKN----------VTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQ---- 122 (311)
T ss_pred --------------------------CCc----------eEEEEEeecCeEEEecCCCceEEEEeccCcccchhcc----
Confidence 223 4555555679999999999999999999976666555
Q ss_pred cccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEe-ccCCCeEEEE-cCCCCEEEEEeCC
Q 000316 1497 ELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR-AHDGYVTKLA-APEDHLLVSSSLD 1574 (1678)
Q Consensus 1497 ~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~-gH~~~V~sva-spdg~~LaSgS~D 1574 (1678)
+.+.|++|+.. |+..-|++|..+|.|++||+++..+...+. .-..+|.+++ .|||.+|+.+..-
T Consensus 123 ---~~spVn~vvlh-----------pnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnk 188 (311)
T KOG0315|consen 123 ---HNSPVNTVVLH-----------PNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNK 188 (311)
T ss_pred ---CCCCcceEEec-----------CCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCC
Confidence 56789999886 444689999999999999999887666554 3457899999 9999999999999
Q ss_pred CcEEEEEcCCCC----CCCCeEeecCCCCEEE--EEecCCEEEEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCC
Q 000316 1575 KTLRIWDLRRNW----PSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGA 1647 (1678)
Q Consensus 1575 gtI~IWDl~~~~----~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~ 1647 (1678)
|+.++|++-+.. ..++..++.|.+-+.. +|||+++||++|.|+ ++||+++. . -++.....
T Consensus 189 G~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~------~-----~kle~~l~-- 255 (311)
T KOG0315|consen 189 GNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDD------F-----FKLELVLT-- 255 (311)
T ss_pred ccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCC------c-----eeeEEEee--
Confidence 999999987643 2345578899998883 999999999999999 99999752 1 13333333
Q ss_pred CccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1648 KNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1648 ~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
+|..-+.+++||.|+++|+||+.|+++|+|+
T Consensus 256 gh~rWvWdc~FS~dg~YlvTassd~~~rlW~ 286 (311)
T KOG0315|consen 256 GHQRWVWDCAFSADGEYLVTASSDHTARLWD 286 (311)
T ss_pred cCCceEEeeeeccCccEEEecCCCCceeecc
Confidence 4888999999999999999999999999996
No 110
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.97 E-value=3.3e-30 Score=309.94 Aligned_cols=142 Identities=18% Similarity=0.169 Sum_probs=122.2
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH-HHHHHHhcCCCchhHHHhhccC-CCCcccceeeEEE
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLK 245 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~l~~~~~ 245 (1678)
+.||+|+||.||+|+++ .++..||+|.+++....... ...+. +|+.+++.+ +||||+++++++.
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~il~~~~~h~~i~~~~~~~~ 66 (318)
T cd05570 1 KVLGKGSFGKVLLAELK------GTDELYAVKVLKKDVILQDDDVECTM--------TEKRVLALAGKHPFLTQLHSCFQ 66 (318)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhHHHHHH--------HHHHHHHhccCCCCccceeeEEE
Confidence 47999999999999965 46788999999764322222 22223 788898887 7999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
+.+.+|+||||++| +|...+. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~--~~kl~Dfg~ 142 (318)
T cd05570 67 TKDRLFFVMEYVNGGDLMFHIQ--RSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEG--HIKIADFGM 142 (318)
T ss_pred cCCEEEEEEcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCC--cEEecccCC
Confidence 99999999999985 9999887 345789999999999999999999999999999999999999999 899999999
Q ss_pred ccc
Q 000316 325 VGF 327 (1678)
Q Consensus 325 A~~ 327 (1678)
++.
T Consensus 143 ~~~ 145 (318)
T cd05570 143 CKE 145 (318)
T ss_pred Cee
Confidence 874
No 111
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.97 E-value=5.2e-30 Score=302.16 Aligned_cols=149 Identities=19% Similarity=0.238 Sum_probs=129.4
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++++.||+|+||.||+|++. .++..||+|.+............+. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~ 66 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNK------KTGQIVAMKKIRLESEEEGVPSTAI--------REISLLKELQHPNIVCLQD 66 (285)
T ss_pred CceEeeEecccCceEEEEEEEC------CCCcEEEEEEeccccccCCchHHHH--------HHHHHHHhcCCCCEeeeEE
Confidence 5899999999999999999964 4678999999865432222222333 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPYTLENILQFSP-NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g~L~~~l~~~~-~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++.+++.+|+||||++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 67 ~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~--~~~l~d 144 (285)
T cd07861 67 VLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKG--VIKLAD 144 (285)
T ss_pred EEeeCCeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCC--cEEECc
Confidence 999999999999999999999987533 35689999999999999999999999999999999999999999 899999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+++.
T Consensus 145 fg~~~~ 150 (285)
T cd07861 145 FGLARA 150 (285)
T ss_pred ccceee
Confidence 999863
No 112
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.97 E-value=3.2e-30 Score=309.75 Aligned_cols=142 Identities=16% Similarity=0.118 Sum_probs=120.9
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh-HHHHHHHHhcCCCchhHHHhhcc-CCCCcccceeeEEE
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGC-LRHPNVAPVLGLLK 245 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~l~~~~~~~~~Ei~iL~~-l~HpNIV~l~~~~~ 245 (1678)
+.||+|+||+||+|++. .++..||+|.++...... ....... .|..+++. ++||||+++++++.
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~hp~iv~~~~~~~ 66 (316)
T cd05619 1 KMLGKGSFGKVFLAELK------GTNQFFAIKALKKDVVLMDDDVECTM--------VEKRVLSLAWEHPFLTHLYCTFQ 66 (316)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhcchHHHHH--------HHHHHHHhccCCCcCcceEEEEE
Confidence 47999999999999965 467889999997642211 1122222 78888875 48999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
+.+.+|+||||++| +|.+++. ....+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~ey~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~--~~kl~Dfg~ 142 (316)
T cd05619 67 TKENLFFVMEYLNGGDLMFHIQ--SCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDG--HIKIADFGM 142 (316)
T ss_pred eCCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC--CEEEccCCc
Confidence 99999999999984 9999998 345688999999999999999999999999999999999999999 899999999
Q ss_pred ccc
Q 000316 325 VGF 327 (1678)
Q Consensus 325 A~~ 327 (1678)
++.
T Consensus 143 ~~~ 145 (316)
T cd05619 143 CKE 145 (316)
T ss_pred ceE
Confidence 874
No 113
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=3.9e-30 Score=314.29 Aligned_cols=182 Identities=18% Similarity=0.146 Sum_probs=152.6
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++++.||+|+||.||+|++. .++..||+|...... .++|+.+++.++||||+++
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~valK~~~~~~----------------~~~E~~~l~~l~h~~iv~~ 122 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKP------GQPDPVVLKIGQKGT----------------TLIEAMLLQNVNHPSVIRM 122 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEEC------CCCceEEEEeCCccc----------------cHHHHHHHHhCCCCCCcCh
Confidence 347999999999999999999964 457789999854321 1279999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
++++......++||||+.++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 123 ~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~--~~kl~ 199 (357)
T PHA03209 123 KDTLVSGAITCMVLPHYSSDLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVD--QVCIG 199 (357)
T ss_pred hheEEeCCeeEEEEEccCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEe
Confidence 999999999999999999999999874 345689999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||+++...... ......||+.|+|||++.+..|+.++|+|+.|++.
T Consensus 200 DfG~a~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl 246 (357)
T PHA03209 200 DLGAAQFPVVAP------------AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVL 246 (357)
T ss_pred cCccccccccCc------------ccccccccccccCCeecCCCCCCchhhHHHHHHHH
Confidence 999997432110 01123478889999988887888888888888553
No 114
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=315.20 Aligned_cols=172 Identities=17% Similarity=0.189 Sum_probs=145.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.+.|+++..||.|+||.||+|.++ +++...|.|+|.. ..+....+++ -||.||..++||+||+|
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nk------et~~lAAaKvIet--kseEELEDyl--------VEIeILa~CdHP~ivkL 94 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNK------ETKLLAAAKVIET--KSEEELEDYL--------VEIEILAECDHPVIVKL 94 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhcc------cchhhhhhhhhcc--cchhHHhhhh--------hhhhhhhcCCChHHHHH
Confidence 346899999999999999999964 5777788898865 3455666777 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++.|..++.++|+.|||+| -...++- .-...+++.+++.+++|+|.||.|||+++|||||||..|||++-+| .++|
T Consensus 95 l~ayy~enkLwiliEFC~GGAVDaiml-EL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldG--dirL 171 (1187)
T KOG0579|consen 95 LSAYYFENKLWILIEFCGGGAVDAIML-ELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDG--DIRL 171 (1187)
T ss_pred HHHHhccCceEEEEeecCCchHhHHHH-HhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecC--cEee
Confidence 9999999999999999997 5555554 3567799999999999999999999999999999999999999999 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
+|||.+..+.... .....+.|||+|||||+..
T Consensus 172 ADFGVSAKn~~t~-----------qkRDsFIGTPYWMAPEVvm 203 (1187)
T KOG0579|consen 172 ADFGVSAKNKSTR-----------QKRDSFIGTPYWMAPEVVM 203 (1187)
T ss_pred ecccccccchhHH-----------hhhccccCCcccccchhee
Confidence 9999987544211 1122356999999999864
No 115
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.97 E-value=4.8e-30 Score=303.44 Aligned_cols=149 Identities=15% Similarity=0.082 Sum_probs=128.9
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHH-HHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~-~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
.|++.+.||+|+||.||++.+. .++..||+|.+.......... ..+. +|+.+++.++||||++++
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~~~ 66 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVR------ATGKMYACKKLEKKRIKKRKGEAMAL--------NEKQILEKVNSRFVVSLA 66 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEc------CCCceEEEEEEehhhhhhhhhHHHHH--------HHHHHHHhcCCCCEeeee
Confidence 4899999999999999999964 467899999987543222221 2223 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++.+++.+++||||++ |+|.+++.......+++..++.++.|++.||.|||++||+||||||+||++++++ .+||+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~~l~ 144 (285)
T cd05605 67 YAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYG--HIRIS 144 (285)
T ss_pred eeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCC--CEEEe
Confidence 99999999999999998 4999888754455689999999999999999999999999999999999999998 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||+++.
T Consensus 145 Dfg~~~~ 151 (285)
T cd05605 145 DLGLAVE 151 (285)
T ss_pred eCCCcee
Confidence 9999874
No 116
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.97 E-value=2.6e-29 Score=275.83 Aligned_cols=282 Identities=18% Similarity=0.340 Sum_probs=230.5
Q ss_pred eeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCC-CCeEEEEEecCCccEEEEeecCCCCcEEeC--CCcE
Q 000316 1319 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELT-RINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTL 1395 (1678)
Q Consensus 1319 ~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~-tg~~l~~l~gH~~~V~sV~fs~~~~~laS~--DgtV 1395 (1678)
.+..+.||.+.|+.+.|+|+|..++|||. |..|.+|++. .-+-...++||+++|..+.|..++..+.|+ |++|
T Consensus 39 p~m~l~gh~geI~~~~F~P~gs~~aSgG~----Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v 114 (338)
T KOG0265|consen 39 PIMLLPGHKGEIYTIKFHPDGSCFASGGS----DRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTV 114 (338)
T ss_pred hhhhcCCCcceEEEEEECCCCCeEeecCC----cceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceE
Confidence 45567899999999999999999999996 9999999964 445567789999999999999999998554 9999
Q ss_pred EEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCC-CEEEEEECC
Q 000316 1396 HVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECV-ERLVVGIGN 1474 (1678)
Q Consensus 1396 rIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g-~~Lasgs~D 1474 (1678)
+.||.++|++++.++.|... +.++. .+.-| .++.+|+.|
T Consensus 115 ~~wD~~tG~~~rk~k~h~~~------------------------------vNs~~----------p~rrg~~lv~SgsdD 154 (338)
T KOG0265|consen 115 RGWDAETGKRIRKHKGHTSF------------------------------VNSLD----------PSRRGPQLVCSGSDD 154 (338)
T ss_pred EEEecccceeeehhccccce------------------------------eeecC----------ccccCCeEEEecCCC
Confidence 99999999999888876432 11111 11113 356789999
Q ss_pred CcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccC
Q 000316 1475 GSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHD 1554 (1678)
Q Consensus 1475 gtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~ 1554 (1678)
+++|+||+|+...++++... -.+.+++|. ..+.-+.+|+-|+.|++||++.+.....++||.
T Consensus 155 ~t~kl~D~R~k~~~~t~~~k-------yqltAv~f~-----------d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~ 216 (338)
T KOG0265|consen 155 GTLKLWDIRKKEAIKTFENK-------YQLTAVGFK-----------DTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHA 216 (338)
T ss_pred ceEEEEeecccchhhccccc-------eeEEEEEec-----------ccccceeeccccCceeeeccccCcceEEeeccc
Confidence 99999999999888877532 236777774 334679999999999999999999999999999
Q ss_pred CCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCC--CCCeEeecCCCCEE------EEEecCCEEEEEeCCC-eEEEecC
Q 000316 1555 GYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWP--SQPTVFKGHTNGIS------GFSVWGQDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1555 ~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~--~~~~~l~gH~~~V~------afSpdg~~LaSgs~D~-I~vwdl~ 1624 (1678)
+.|+.+. +++|.++.|-+.|.++++||++--.+ +++..+.||..... +|||+++.+.+|+.|+ +++||..
T Consensus 217 DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~ 296 (338)
T KOG0265|consen 217 DTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTT 296 (338)
T ss_pred CceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCccccccccceEEEeecc
Confidence 9999999 99999999999999999999987432 34567777765332 5999999999999999 9999963
Q ss_pred CCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEE
Q 000316 1625 KSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRL 1676 (1678)
Q Consensus 1625 ~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrI 1676 (1678)
. ..-+|.. . +|.+.|++++|+|...++.+|+.|.+|.+
T Consensus 297 ~-----------r~~lykl-p--Gh~gsvn~~~Fhp~e~iils~~sdk~i~l 334 (338)
T KOG0265|consen 297 S-----------RRILYKL-P--GHYGSVNEVDFHPTEPIILSCSSDKTIYL 334 (338)
T ss_pred c-----------ccEEEEc-C--CcceeEEEeeecCCCcEEEEeccCceeEe
Confidence 1 1122221 2 58999999999999999999999999875
No 117
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=99.97 E-value=1e-29 Score=309.48 Aligned_cols=231 Identities=20% Similarity=0.414 Sum_probs=208.9
Q ss_pred ecCCCCCCCCCeEEEEeCCCCEEEEeCCC--------------------------------ceeEEeccccccEEEEEEe
Q 000316 1289 PTPAASWDGPDFLGRVGGLKDESPWKIKA--------------------------------SILSSIRAHHGALRSVAVG 1336 (1678)
Q Consensus 1289 fSpdg~~~~~~~LasgS~D~~v~lWd~~~--------------------------------~~l~tl~gH~~~V~svafs 1336 (1678)
||+|++. ||.|-.|-.|++|.+.. ...+++.||+++|..+.|+
T Consensus 386 fSddssm-----lA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg~sFs 460 (707)
T KOG0263|consen 386 FSDDSSM-----LACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYGCSFS 460 (707)
T ss_pred ecCCcch-----hhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceeeeeec
Confidence 8888886 88888899999998651 1245688999999999999
Q ss_pred cCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcEEeC--CCcEEEEECCCCceeEEecccCc
Q 000316 1337 QDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSM 1414 (1678)
Q Consensus 1337 pdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~laS~--DgtVrIWD~~tg~~~~~l~~~~~ 1414 (1678)
|+.++|+|||. |++||+|++.+..++..++||..+|++|.|+|-|-++||+ |+|.++|.....++++.+.+|-.
T Consensus 461 Pd~rfLlScSE----D~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRifaghls 536 (707)
T KOG0263|consen 461 PDRRFLLSCSE----DSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGHLS 536 (707)
T ss_pred ccccceeeccC----CcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhhhccccc
Confidence 99999999998 9999999999999999999999999999999999998554 99999999998888888877642
Q ss_pred cccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCC
Q 000316 1415 DSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGE 1494 (1678)
Q Consensus 1415 ~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~ 1494 (1678)
+ +.|+.|+|+..++++||.|.+||+||+.+|..++.|.||
T Consensus 537 D----------------------------------------V~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH 576 (707)
T KOG0263|consen 537 D----------------------------------------VDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGH 576 (707)
T ss_pred c----------------------------------------cceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCC
Confidence 2 677888888999999999999999999999999999865
Q ss_pred CCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeC
Q 000316 1495 PTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSL 1573 (1678)
Q Consensus 1495 ~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~ 1573 (1678)
.+.|.+++|+ |+|.+||+|+.||.|.+||+.+|+++..+.+|++.|++|. +.+|..||+||.
T Consensus 577 ------~~~V~al~~S-----------p~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~ 639 (707)
T KOG0263|consen 577 ------KGPVTALAFS-----------PCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGA 639 (707)
T ss_pred ------CCceEEEEEc-----------CCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCC
Confidence 4568999986 5668999999999999999999999999999999999999 999999999999
Q ss_pred CCcEEEEEcCCC
Q 000316 1574 DKTLRIWDLRRN 1585 (1678)
Q Consensus 1574 DgtI~IWDl~~~ 1585 (1678)
|.+|++||+...
T Consensus 640 DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 640 DNSVRLWDLTKV 651 (707)
T ss_pred CCeEEEEEchhh
Confidence 999999999764
No 118
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.97 E-value=8.8e-30 Score=304.56 Aligned_cols=153 Identities=27% Similarity=0.259 Sum_probs=130.7
Q ss_pred cccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcc
Q 000316 158 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 237 (1678)
Q Consensus 158 ~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNI 237 (1678)
++..++|++.+.||+|+||.||+|.++ .++..||+|.+............. .+|+.+++.++|+||
T Consensus 3 ~~~~~~y~~~~~ig~g~~~~v~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~--------~~E~~~l~~l~h~~i 68 (309)
T cd07845 3 CRSVTEFEKLNRIGEGTYGIVYRARDT------TSGEIVALKKVRMDNERDGIPISS--------LREITLLLNLRHPNI 68 (309)
T ss_pred cccccceeEeeeeeecCCEEEEEEEEC------CCCcEEEEEEEEeccCCCCCcchh--------hHHHHHHHhCCCCCC
Confidence 345789999999999999999999965 467899999987543222111122 389999999999999
Q ss_pred cceeeEEEeC--CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCce
Q 000316 238 APVLGLLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1678)
Q Consensus 238 V~l~~~~~~~--~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~ 315 (1678)
+++++++... +.+++||||++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++
T Consensus 69 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~-- 145 (309)
T cd07845 69 VELKEVVVGKHLDSIFLVMEYCEQDLASLLDNM-PTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKG-- 145 (309)
T ss_pred cceEEEEecCCCCeEEEEEecCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC--
Confidence 9999999765 578999999999999998843 35689999999999999999999999999999999999999999
Q ss_pred eEEEEecCCccc
Q 000316 316 WLYICDKPLVGF 327 (1678)
Q Consensus 316 ~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 146 ~~kL~dfg~~~~ 157 (309)
T cd07845 146 CLKIADFGLART 157 (309)
T ss_pred CEEECccceeee
Confidence 899999999874
No 119
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.97 E-value=8.6e-30 Score=323.23 Aligned_cols=152 Identities=14% Similarity=0.074 Sum_probs=130.3
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||+||+|++. .++..||||.+............+. +|+.+|..++|+||+++
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~------~~g~~vAvK~i~~~~~~~~~~~~~~--------~Ei~~l~~~~h~~iv~~ 96 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRV------SDGEPFAVKVVDMEGMSEADKNRAQ--------AEVCCLLNCDFFSIVKC 96 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEc------CCCCEEEEEEEecccCCHHHHHHHH--------HHHHHHhcCCCCcEEEe
Confidence 468999999999999999999864 5688999999977555444444444 89999999999999999
Q ss_pred eeEEEeCC--------eEEEeccCCC-CCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEe
Q 000316 241 LGLLKTSG--------LITSVIPKTP-YTLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309 (1678)
Q Consensus 241 ~~~~~~~~--------~~~lVmEy~~-g~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl 309 (1678)
++.+...+ .+++||||++ |+|.+++... ....+++..+..++.|++.||.|||++||+||||||+|||+
T Consensus 97 ~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl 176 (496)
T PTZ00283 97 HEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILL 176 (496)
T ss_pred ecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE
Confidence 98876433 4789999999 5999998742 23568999999999999999999999999999999999999
Q ss_pred cCCCceeEEEEecCCcccC
Q 000316 310 TDSCWSWLYICDKPLVGFN 328 (1678)
Q Consensus 310 ~~~g~~~lKL~DFGlA~~~ 328 (1678)
+.++ .+||+|||+++..
T Consensus 177 ~~~~--~vkL~DFGls~~~ 193 (496)
T PTZ00283 177 CSNG--LVKLGDFGFSKMY 193 (496)
T ss_pred eCCC--CEEEEecccCeec
Confidence 9998 8999999999853
No 120
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.97 E-value=2.5e-29 Score=279.80 Aligned_cols=282 Identities=18% Similarity=0.338 Sum_probs=235.4
Q ss_pred cccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCC
Q 000316 1276 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFK 1352 (1678)
Q Consensus 1276 ~~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~D 1352 (1678)
..-+.||.+||.+ +.|...| ++|||.|++++|||+. |.+..++.||-..|+.|++|+-..++++|+. |
T Consensus 144 ~rVi~gHlgWVr~vavdP~n~w-----f~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~ge----d 214 (460)
T KOG0285|consen 144 YRVISGHLGWVRSVAVDPGNEW-----FATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGE----D 214 (460)
T ss_pred hhhhhhccceEEEEeeCCCcee-----EEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecC----C
Confidence 3457799999997 7777777 9999999999999998 7888999999999999999999999999997 8
Q ss_pred CeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcEEeC--CCcEEEEECCCCceeEEecccCccccccCCCCCCccccc
Q 000316 1353 GTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKIN 1430 (1678)
Q Consensus 1353 gtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~laS~--DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~ 1430 (1678)
+.|+.||++..+.++.|.||-..|++++.+|....++++ |.++|+||+++...+.++.+|.
T Consensus 215 k~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~----------------- 277 (460)
T KOG0285|consen 215 KQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHT----------------- 277 (460)
T ss_pred CeeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCC-----------------
Confidence 999999999999999999999999999999998888544 9999999999999998888764
Q ss_pred cccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEee
Q 000316 1431 TDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICAC 1510 (1678)
Q Consensus 1431 ~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~ 1510 (1678)
..|.++.+. |-..++++||.|++|++||++.|+...++..| ...|+++|..
T Consensus 278 -------------~~V~~V~~~----------~~dpqvit~S~D~tvrlWDl~agkt~~tlt~h------kksvral~lh 328 (460)
T KOG0285|consen 278 -------------NPVASVMCQ----------PTDPQVITGSHDSTVRLWDLRAGKTMITLTHH------KKSVRALCLH 328 (460)
T ss_pred -------------CcceeEEee----------cCCCceEEecCCceEEEeeeccCceeEeeecc------cceeeEEecC
Confidence 234444444 34678999999999999999999998888754 4458888876
Q ss_pred CCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCC
Q 000316 1511 GSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQP 1590 (1678)
Q Consensus 1511 ~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~~~~ 1590 (1678)
|. -..+|+++.| .|+-|++-.|..++.+.+|..-|++++...+.++++|+..|.|..||.+++..-+.
T Consensus 329 P~-----------e~~fASas~d-nik~w~~p~g~f~~nlsgh~~iintl~~nsD~v~~~G~dng~~~fwdwksg~nyQ~ 396 (460)
T KOG0285|consen 329 PK-----------ENLFASASPD-NIKQWKLPEGEFLQNLSGHNAIINTLSVNSDGVLVSGGDNGSIMFWDWKSGHNYQR 396 (460)
T ss_pred Cc-----------hhhhhccCCc-cceeccCCccchhhccccccceeeeeeeccCceEEEcCCceEEEEEecCcCccccc
Confidence 43 3578888876 69999999999999999999999999954556999999999999999998742111
Q ss_pred e-Eee--c---CCCCEE--EEEecCCEEEEEeCCC-eEEEecC
Q 000316 1591 T-VFK--G---HTNGIS--GFSVWGQDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1591 ~-~l~--g---H~~~V~--afSpdg~~LaSgs~D~-I~vwdl~ 1624 (1678)
. +.. | ...+|. ||...|..|++|..|+ |++|.-.
T Consensus 397 ~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keD 439 (460)
T KOG0285|consen 397 GQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKED 439 (460)
T ss_pred ccccccCCccccccceeEEeecccCceEEeccCCcceEEEecc
Confidence 1 111 1 123455 4777899999999999 9999853
No 121
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.97 E-value=1.2e-29 Score=303.98 Aligned_cols=143 Identities=21% Similarity=0.233 Sum_probs=118.1
Q ss_pred eeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEe
Q 000316 167 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1678)
Q Consensus 167 ~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~ 246 (1678)
..+||+|+||.||+|+++ ...++..+|+|.+...... ..+. +|+.+|+.++||||+++++++..
T Consensus 6 g~~lG~G~~g~Vy~~~~~----~~~~~~~~a~k~~~~~~~~----~~~~--------~E~~~l~~l~h~niv~~~~~~~~ 69 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRK----DGKDEKEYALKQIEGTGIS----MSAC--------REIALLRELKHPNVIALQKVFLS 69 (317)
T ss_pred ceEeccCCCeeEEEEEec----CCCccceEEEEEecCCCCc----HHHH--------HHHHHHHhCCCCCeeeEEEEEec
Confidence 468999999999999853 1235688999998653221 1222 89999999999999999999854
Q ss_pred --CCeEEEeccCCCCCHHHHHhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEec----CCC
Q 000316 247 --SGLITSVIPKTPYTLENILQFS-------PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT----DSC 313 (1678)
Q Consensus 247 --~~~~~lVmEy~~g~L~~~l~~~-------~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~----~~g 313 (1678)
+..+++||||++++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||+. .++
T Consensus 70 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ 149 (317)
T cd07867 70 HSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERG 149 (317)
T ss_pred cCCCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCC
Confidence 4578999999999999888632 123578999999999999999999999999999999999994 445
Q ss_pred ceeEEEEecCCccc
Q 000316 314 WSWLYICDKPLVGF 327 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 150 --~~kl~DfG~a~~ 161 (317)
T cd07867 150 --RVKIADMGFARL 161 (317)
T ss_pred --cEEEeeccceec
Confidence 899999999974
No 122
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=99.97 E-value=4.3e-29 Score=304.12 Aligned_cols=286 Identities=22% Similarity=0.319 Sum_probs=230.3
Q ss_pred eeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCC-------------------------------CeEEE
Q 000316 1319 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR-------------------------------INCVS 1367 (1678)
Q Consensus 1319 ~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~t-------------------------------g~~l~ 1367 (1678)
|..++..-...|+|..|++|+..+|.|-. |..|++|.+.. +....
T Consensus 370 c~YT~~nt~~~v~ca~fSddssmlA~Gf~----dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~ 445 (707)
T KOG0263|consen 370 CMYTFHNTYQGVTCAEFSDDSSMLACGFV----DSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSR 445 (707)
T ss_pred EEEEEEEcCCcceeEeecCCcchhhcccc----ccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeE
Confidence 56666666678999999999998888887 89999999752 11244
Q ss_pred EEecCCccEEEEeecCCCCcEEeC--CCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCC
Q 000316 1368 GYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSG 1445 (1678)
Q Consensus 1368 ~l~gH~~~V~sV~fs~~~~~laS~--DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~ 1445 (1678)
++.||+++|+++.|+|+.+.|.|| |++||+|.+.+..++-.+.+| ..+
T Consensus 446 ~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH------------------------------~~P 495 (707)
T KOG0263|consen 446 TLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGH------------------------------LAP 495 (707)
T ss_pred EeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCC------------------------------Ccc
Confidence 588999999999999999999555 999999999999988777754 334
Q ss_pred eEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCC
Q 000316 1446 ILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPS 1525 (1678)
Q Consensus 1446 v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~ 1525 (1678)
|+.+.|. |-|-++||+|.|++-++|......+++.+.+|. +.|.|+.|. |+.+
T Consensus 496 VwdV~F~----------P~GyYFatas~D~tArLWs~d~~~PlRifaghl------sDV~cv~FH-----------PNs~ 548 (707)
T KOG0263|consen 496 VWDVQFA----------PRGYYFATASHDQTARLWSTDHNKPLRIFAGHL------SDVDCVSFH-----------PNSN 548 (707)
T ss_pred eeeEEec----------CCceEEEecCCCceeeeeecccCCchhhhcccc------cccceEEEC-----------Cccc
Confidence 5555555 459999999999999999999888888888654 458889886 5557
Q ss_pred EEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEE--
Q 000316 1526 WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG-- 1602 (1678)
Q Consensus 1526 ~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a-- 1602 (1678)
++|+||.|.+||+||+.+|..++.|.||.++|.+|+ +|+|++|+||+.||.|++||+.++ ..+..+.+|++.|.+
T Consensus 549 Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~--~~v~~l~~Ht~ti~Sls 626 (707)
T KOG0263|consen 549 YVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANG--SLVKQLKGHTGTIYSLS 626 (707)
T ss_pred ccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCC--cchhhhhcccCceeEEE
Confidence 999999999999999999999999999999999999 999999999999999999999998 667899999999995
Q ss_pred EEecCCEEEEEeCCC-eEEEecCCCCCC--CCcceec----------cceeeeeecCCCccCcEEEEEEecCCCEEEEEe
Q 000316 1603 FSVWGQDVISISNNK-IGLSSLSKSADE--DGQHRLV----------PQKLYMVDNGAKNLSVLSSISILPFSRLFLVGT 1669 (1678)
Q Consensus 1603 fSpdg~~LaSgs~D~-I~vwdl~~~~~~--~g~~~~~----------~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs 1669 (1678)
||.||..||+||.|. |++||+...... .+..... ..-+.... .....+|..+.|..-.-.|++|.
T Consensus 627 FS~dg~vLasgg~DnsV~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llgs~--~tK~tpv~~l~FtrrNl~L~~g~ 704 (707)
T KOG0263|consen 627 FSRDGNVLASGGADNSVRLWDLTKVIELLNLGHISTSNSAITQENNASSLLLGSF--YTKNTPVVGLHFTRRNLLLAVGP 704 (707)
T ss_pred EecCCCEEEecCCCCeEEEEEchhhcccccccccccccccccccCCCCcceeeee--eecCceEEEEEEeccceeEEecc
Confidence 999999999999999 999998643221 0000000 00011111 13456899999998776676664
No 123
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.97 E-value=9.5e-30 Score=300.09 Aligned_cols=142 Identities=17% Similarity=0.105 Sum_probs=121.4
Q ss_pred eeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH-HHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeCC
Q 000316 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 248 (1678)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~~ 248 (1678)
||+|+||+||++.++ .+++.+|+|.+.+....... ...+. .|+.+|+.++||||+++++++..+.
T Consensus 1 lg~G~~g~Vy~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~E~~il~~l~~~~i~~~~~~~~~~~ 66 (280)
T cd05608 1 LGKGGFGEVSACQMR------ATGKLYACKKLNKKRLKKRKGYEGAM--------VEKRILAKVHSRFIVSLAYAFQTKT 66 (280)
T ss_pred CCCCCceeEEEEEEc------cCCcEEEEEeeeHHHHhhhHHHHHHH--------HHHHHHHhCCCCcEeeeeEEEcCCC
Confidence 799999999999965 46789999998754322221 12223 8999999999999999999999999
Q ss_pred eEEEeccCCCC-CHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCc
Q 000316 249 LITSVIPKTPY-TLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1678)
Q Consensus 249 ~~~lVmEy~~g-~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA 325 (1678)
.+|+||||++| +|.+++.. .....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 67 ~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~~l~dfg~~ 144 (280)
T cd05608 67 DLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDG--NVRISDLGLA 144 (280)
T ss_pred eEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEEeeCccc
Confidence 99999999985 99888753 1345689999999999999999999999999999999999999988 8999999998
Q ss_pred cc
Q 000316 326 GF 327 (1678)
Q Consensus 326 ~~ 327 (1678)
+.
T Consensus 145 ~~ 146 (280)
T cd05608 145 VE 146 (280)
T ss_pred ee
Confidence 74
No 124
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=7.8e-28 Score=288.62 Aligned_cols=360 Identities=13% Similarity=0.134 Sum_probs=277.7
Q ss_pred ccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCCC---ceeEEeccccccEEEEEEecCCCEEEEEecCCCC
Q 000316 1277 SNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKA---SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGF 1351 (1678)
Q Consensus 1277 ~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~~---~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~ 1351 (1678)
.+..||-+-|.+ ||.|..+ |++||.|-++|+|.+++ -....+.||.+.|-..-|..|...++|-|.
T Consensus 139 r~~~g~fddi~si~Ws~DSr~-----l~~gsrD~s~rl~~v~~~k~~~~~~l~gHkd~VvacfF~~~~~~l~tvsk---- 209 (893)
T KOG0291|consen 139 RTYLGHFDDITSIDWSDDSRL-----LVTGSRDLSARLFGVDGNKNLFTYALNGHKDYVVACFFGANSLDLYTVSK---- 209 (893)
T ss_pred eeecCCccceeEEEeccCCce-----EEeccccceEEEEEeccccccceEeccCCCcceEEEEeccCcceEEEEec----
Confidence 567788888876 8888876 99999999999999883 356788999999999999999999999998
Q ss_pred CCeEEEEeCCC-----------------------CeE-----------EEEEecCCccEEEEeecCCCCcEEeC--CCcE
Q 000316 1352 KGTVQKWELTR-----------------------INC-----------VSGYYGHEEVVNDICVLSSSGRIASC--DGTL 1395 (1678)
Q Consensus 1352 DgtVrlWDl~t-----------------------g~~-----------l~~l~gH~~~V~sV~fs~~~~~laS~--DgtV 1395 (1678)
||.+.+|.... ++. ..-+..-...|++.+|++....++.+ .|..
T Consensus 210 dG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f 289 (893)
T KOG0291|consen 210 DGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEF 289 (893)
T ss_pred CceEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEecCCee
Confidence 99999998650 111 11122234789999999888877655 8899
Q ss_pred EEEECCCCceeEEecccCcc-ccccCCCCCCcccccccccccccc--CCCCCCeEEeeecCCceeEeEeecCCCEEEEEE
Q 000316 1396 HVWNSQTGKLLSVFAEQSMD-SLHGGSPSSSISKINTDQVGMLNS--NTLSSGILSTAFDGNLYTCLHHIECVERLVVGI 1472 (1678)
Q Consensus 1396 rIWD~~tg~~~~~l~~~~~~-~~~~~s~s~~~~~~~~~~~~~~~~--~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs 1472 (1678)
.++++..-.+++.+...... ........+.-+.+.+....-+.. +.....|....-+-..++|++++|||..+|+|+
T Consensus 290 ~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~ 369 (893)
T KOG0291|consen 290 GLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGA 369 (893)
T ss_pred EEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEecc
Confidence 99999988888887754322 111122122222222222212221 222333333333445689999999999999999
Q ss_pred CCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEec
Q 000316 1473 GNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA 1552 (1678)
Q Consensus 1473 ~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~g 1552 (1678)
.||.||+||..+|-|..+|..|+ +.|++++|. ..|+.+++.|-||+||.||+...+..+++..
T Consensus 370 eDgKVKvWn~~SgfC~vTFteHt------s~Vt~v~f~-----------~~g~~llssSLDGtVRAwDlkRYrNfRTft~ 432 (893)
T KOG0291|consen 370 EDGKVKVWNTQSGFCFVTFTEHT------SGVTAVQFT-----------ARGNVLLSSSLDGTVRAWDLKRYRNFRTFTS 432 (893)
T ss_pred CCCcEEEEeccCceEEEEeccCC------CceEEEEEE-----------ecCCEEEEeecCCeEEeeeecccceeeeecC
Confidence 99999999999999999999654 457888875 4568999999999999999999999999885
Q ss_pred cC-CCeEEEE-cCCCCEEEEEeCCC-cEEEEEcCCCCCCCCeEeecCCCCEE--EEEecCCEEEEEeCCC-eEEEecCCC
Q 000316 1553 HD-GYVTKLA-APEDHLLVSSSLDK-TLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKS 1626 (1678)
Q Consensus 1553 H~-~~V~sva-spdg~~LaSgS~Dg-tI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~~ 1626 (1678)
-. ....+|+ .|.|.++..|+.|. .|.||++++| +.+..+.||.++|. +|+|+|..|+|+|.|+ |++||+-.+
T Consensus 433 P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTG--qllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s 510 (893)
T KOG0291|consen 433 PEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTG--QLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSS 510 (893)
T ss_pred CCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecC--eeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeecc
Confidence 43 3356777 88899999999887 5999999999 66779999999999 4999999999999999 999998522
Q ss_pred CCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1627 ADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1627 ~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
.++. ... .+...+.+++|.|||+-||+++-||.|.+||
T Consensus 511 ---~~~v-----Etl------~i~sdvl~vsfrPdG~elaVaTldgqItf~d 548 (893)
T KOG0291|consen 511 ---SGTV-----ETL------EIRSDVLAVSFRPDGKELAVATLDGQITFFD 548 (893)
T ss_pred ---Ccee-----eeE------eeccceeEEEEcCCCCeEEEEEecceEEEEE
Confidence 1211 111 2567899999999999999999999999997
No 125
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=99.97 E-value=1.3e-28 Score=283.21 Aligned_cols=313 Identities=18% Similarity=0.248 Sum_probs=258.1
Q ss_pred CCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCCC---c--eeEEec------cc----cccEEEEEEecCCCEEEE
Q 000316 1282 CEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKA---S--ILSSIR------AH----HGALRSVAVGQDECTVFT 1344 (1678)
Q Consensus 1282 H~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~~---~--~l~tl~------gH----~~~V~svafspdg~~LaS 1344 (1678)
|+..|.+ ++|-.. .++++|+.|-+.++|++.. . ....|+ |+ +..|++++|+.+|..||+
T Consensus 177 ~~~~V~~~~WnP~~~----~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~Lat 252 (524)
T KOG0273|consen 177 HESEVFICAWNPLRD----GLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLAT 252 (524)
T ss_pred CCCceEEEecCchhh----hhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEE
Confidence 8888874 666444 1289999999999999762 1 111122 22 357999999999999999
Q ss_pred EecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcEEe--CCCcEEEEECCCCceeEEecccCccccccCCC
Q 000316 1345 AGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIAS--CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSP 1422 (1678)
Q Consensus 1345 gS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~laS--~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~ 1422 (1678)
|+- ||.+|+|+.. |..+.++..|.++|.++.|+..|.++.| .|+|+.+||..+|+..+.+..|+..
T Consensus 253 G~~----~G~~riw~~~-G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~------- 320 (524)
T KOG0273|consen 253 GSE----DGEARIWNKD-GNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAP------- 320 (524)
T ss_pred eec----CcEEEEEecC-chhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCC-------
Confidence 995 9999999964 6788889999999999999999999844 4999999999999998888765422
Q ss_pred CCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCC
Q 000316 1423 SSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPS 1502 (1678)
Q Consensus 1423 s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~ 1502 (1678)
-..+.|. +...+++++.|+.|+++-+....++.++.+|++
T Consensus 321 -----------------------~lDVdW~-----------~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g------ 360 (524)
T KOG0273|consen 321 -----------------------ALDVDWQ-----------SNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHG------ 360 (524)
T ss_pred -----------------------ccceEEe-----------cCceEeecCCCceEEEEEecCCCcceeeecccC------
Confidence 1223333 245799999999999999999999999997654
Q ss_pred cceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCC---------CEEEEEe
Q 000316 1503 LVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APED---------HLLVSSS 1572 (1678)
Q Consensus 1503 ~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg---------~~LaSgS 1572 (1678)
.|.++.|+ |.|.+|+++|+|++++||....+.....+.+|+..|..+. +|+| ..+++++
T Consensus 361 ~V~alk~n-----------~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas 429 (524)
T KOG0273|consen 361 EVNALKWN-----------PTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASAS 429 (524)
T ss_pred ceEEEEEC-----------CCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEee
Confidence 47888876 4567999999999999999999999999999999998888 6644 5899999
Q ss_pred CCCcEEEEEcCCCCCCCCeEeecCCCCEEE--EEecCCEEEEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCCCc
Q 000316 1573 LDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKN 1649 (1678)
Q Consensus 1573 ~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h 1649 (1678)
.|++|++||+..+ .++.+|..|+.+|.+ |||+|+++|+|+.|| |.+|++. ..+++....+
T Consensus 430 ~dstV~lwdv~~g--v~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~------------~~~l~~s~~~--- 492 (524)
T KOG0273|consen 430 FDSTVKLWDVESG--VPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTK------------TGKLVKSYQG--- 492 (524)
T ss_pred cCCeEEEEEccCC--ceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEecccc------------chheeEeecC---
Confidence 9999999999999 778899999999994 999999999999999 9999974 2244444433
Q ss_pred cCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1650 LSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1650 ~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
.+.|..++|+.+|..+..+-.||.+.+.|
T Consensus 493 ~~~Ifel~Wn~~G~kl~~~~sd~~vcvld 521 (524)
T KOG0273|consen 493 TGGIFELCWNAAGDKLGACASDGSVCVLD 521 (524)
T ss_pred CCeEEEEEEcCCCCEEEEEecCCCceEEE
Confidence 45699999999999999999999998875
No 126
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.97 E-value=8.2e-30 Score=300.48 Aligned_cols=148 Identities=20% Similarity=0.224 Sum_probs=128.7
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.+.||+|+||.||+|++. .++..+|+|.+............+ .+|+.+++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~------~~g~~~~~k~~~~~~~~~~~~~~~--------~~ei~~l~~l~h~~i~~~~~ 66 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNR------ETHEIVALKRVRLDDDDEGVPSSA--------LREICLLKELKHKNIVRLYD 66 (284)
T ss_pred CceeEEEecccCCeEEEEEEEC------CCCcEEEEEEeecccccccCccch--------hHHHHHHHhcCCCCeeeHHH
Confidence 5899999999999999999965 467899999987542222211222 28999999999999999999
Q ss_pred EEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEec
Q 000316 243 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DF 322 (1678)
++.+...+++||||++++|.+++.. ....+++..++.++.||++||.|||++||+||||||+||+++.++ .+||+||
T Consensus 67 ~~~~~~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~--~~~l~df 143 (284)
T cd07839 67 VLHSDKKLTLVFEYCDQDLKKYFDS-CNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNG--ELKLADF 143 (284)
T ss_pred HhccCCceEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCC--cEEECcc
Confidence 9999999999999999999998873 345689999999999999999999999999999999999999998 8999999
Q ss_pred CCccc
Q 000316 323 PLVGF 327 (1678)
Q Consensus 323 GlA~~ 327 (1678)
|+++.
T Consensus 144 g~~~~ 148 (284)
T cd07839 144 GLARA 148 (284)
T ss_pred chhhc
Confidence 99873
No 127
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.97 E-value=3e-29 Score=317.80 Aligned_cols=150 Identities=13% Similarity=0.135 Sum_probs=127.0
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
..|.+.+.||+|+||.||+|.+.. ..+..||+|.+... . .......+ +|+.+|+.++|||||+++
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~-----~~~~~vv~K~~~~~--~-~~~~~~~~-------~E~~~l~~l~Hpniv~~~ 131 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGS-----DPKEKVVAKFVMLN--D-ERQAAYAR-------SELHCLAACDHFGIVKHF 131 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcC-----CCCeEEEEEEcccC--C-HHHHHHHH-------HHHHHHHhCCCCCEeEEE
Confidence 359999999999999999998642 22567888876542 2 22222332 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCC-CCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 242 GLLKTSGLITSVIPKTP-YTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~-g~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
+++..++.+||||||++ |+|.+++.. .....+++..+..++.||+.||.|||++||+||||||+|||++.++ .+|
T Consensus 132 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~--~~k 209 (478)
T PTZ00267 132 DDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTG--IIK 209 (478)
T ss_pred EEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCC--cEE
Confidence 99999999999999998 599998863 2345689999999999999999999999999999999999999999 899
Q ss_pred EEecCCcccC
Q 000316 319 ICDKPLVGFN 328 (1678)
Q Consensus 319 L~DFGlA~~~ 328 (1678)
|+|||+++..
T Consensus 210 L~DFgla~~~ 219 (478)
T PTZ00267 210 LGDFGFSKQY 219 (478)
T ss_pred EEeCcCceec
Confidence 9999999853
No 128
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.97 E-value=1.5e-28 Score=308.25 Aligned_cols=275 Identities=20% Similarity=0.299 Sum_probs=237.3
Q ss_pred CCceE--eecCCCCCCCCCeEEEEeCCCCEEEEeCC-Cc--eeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEE
Q 000316 1283 EPWFW--FPTPAASWDGPDFLGRVGGLKDESPWKIK-AS--ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQK 1357 (1678)
Q Consensus 1283 ~~~V~--~fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~--~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrl 1357 (1678)
...|. .||++|.+ +++++.|+.+++|+.. .. .++++.+|...|++++|+|+++++++|+. |++||+
T Consensus 159 ~~sv~~~~fs~~g~~-----l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~----D~tiri 229 (456)
T KOG0266|consen 159 CPSVTCVDFSPDGRA-----LAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSD----DKTLRI 229 (456)
T ss_pred cCceEEEEEcCCCCe-----EEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecC----CceEEE
Confidence 44554 49999998 9999999999999986 44 67888999999999999999999999997 999999
Q ss_pred EeC-CCCeEEEEEecCCccEEEEeecCCCCcEE--eCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccc
Q 000316 1358 WEL-TRINCVSGYYGHEEVVNDICVLSSSGRIA--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQV 1434 (1678)
Q Consensus 1358 WDl-~tg~~l~~l~gH~~~V~sV~fs~~~~~la--S~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~ 1434 (1678)
||+ ..+.++++++||...|++++|+|++..++ +.|++|||||+++++++..+..|..
T Consensus 230 wd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~-------------------- 289 (456)
T KOG0266|consen 230 WDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSD-------------------- 289 (456)
T ss_pred eeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCC--------------------
Confidence 999 66699999999999999999999997774 4599999999999999999987642
Q ss_pred cccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCe--eeEEeeCCCCcccCCCcceEEEeeCC
Q 000316 1435 GMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQ--KLHLWRGEPTELGFPSLVSAICACGS 1512 (1678)
Q Consensus 1435 ~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~--~l~~l~~~~~~v~~~~~V~sva~~~~ 1512 (1678)
.+++++++++++.+++++.|+.|++||+.++. ++..+.++... . .+.+++|+
T Consensus 290 --------------------~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~---~-~~~~~~fs-- 343 (456)
T KOG0266|consen 290 --------------------GISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENS---A-PVTSVQFS-- 343 (456)
T ss_pred --------------------ceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCC---C-ceeEEEEC--
Confidence 25667777789999999999999999999998 56666655432 2 57888875
Q ss_pred CccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE----cCCCCEEEEEeCCCcEEEEEcCCCCCC
Q 000316 1513 EKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA----APEDHLLVSSSLDKTLRIWDLRRNWPS 1588 (1678)
Q Consensus 1513 ~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva----spdg~~LaSgS~DgtI~IWDl~~~~~~ 1588 (1678)
++|.++++++.|+.+++||++.++.+..+.+|...++++. ++++.++++|+.|+.|++||+.++ .
T Consensus 344 ---------p~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~--~ 412 (456)
T KOG0266|consen 344 ---------PNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSG--G 412 (456)
T ss_pred ---------CCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCcc--c
Confidence 5668999999999999999999999999999988655553 678899999999999999999987 5
Q ss_pred CCeEeecC-CCCEE--EEEecCCEEEEEe--CCC-eEEEec
Q 000316 1589 QPTVFKGH-TNGIS--GFSVWGQDVISIS--NNK-IGLSSL 1623 (1678)
Q Consensus 1589 ~~~~l~gH-~~~V~--afSpdg~~LaSgs--~D~-I~vwdl 1623 (1678)
.+..+.+| ...|. ++++..+++++++ .|+ |++|..
T Consensus 413 ~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~ 453 (456)
T KOG0266|consen 413 ILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKY 453 (456)
T ss_pred hhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecC
Confidence 66788999 66666 4899999999987 677 999985
No 129
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2e-30 Score=307.85 Aligned_cols=164 Identities=23% Similarity=0.292 Sum_probs=136.8
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeC
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~ 247 (1678)
-+||+|+||+||-|++. .+....|||.+.... + +.. + +.-.||.+.+.|+|.|||+++|.+..+
T Consensus 581 vVLGKGTYG~VYA~RD~------~tqvrIaIKEIpekd-s-r~~-Q-------PLhEEIaLH~~LrHkNIVrYLGs~sen 644 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDM------DTQVRIAIKEIPEKD-S-REV-Q-------PLHEEIALHSTLRHKNIVRYLGSVSEN 644 (1226)
T ss_pred EEeecCceeEEEeeccc------cceeEEEeeeccccc-c-hhh-c-------cHHHHHHHHHHHhhHhHHHHhhccCCC
Confidence 37999999999999965 567889999986532 1 111 1 222899999999999999999999999
Q ss_pred CeEEEeccCCCC-CHHHHHhhCCCCCC--CHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecC-CCceeEEEEecC
Q 000316 248 GLITSVIPKTPY-TLENILQFSPNALK--SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD-SCWSWLYICDKP 323 (1678)
Q Consensus 248 ~~~~lVmEy~~g-~L~~~l~~~~~~~l--~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~-~g~~~lKL~DFG 323 (1678)
+.+-|.||-++| +|.++++. +-+++ .|..+-+|.+||++||.|||++.|||||||-+|+||+. .| .+||+|||
T Consensus 645 Gf~kIFMEqVPGGSLSsLLrs-kWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySG--vlKISDFG 721 (1226)
T KOG4279|consen 645 GFFKIFMEQVPGGSLSSLLRS-KWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSG--VLKISDFG 721 (1226)
T ss_pred CeEEEEeecCCCCcHHHHHHh-ccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccc--eEEecccc
Confidence 999999999995 99999984 55666 78889999999999999999999999999999999985 45 89999999
Q ss_pred CcccCCCCCcccccCCCCcceeecccccCccccccccc
Q 000316 324 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 324 lA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 361 (1678)
.++...+.. -|.+.+.||..|||||++
T Consensus 722 TsKRLAgin-----------P~TETFTGTLQYMAPEvI 748 (1226)
T KOG4279|consen 722 TSKRLAGIN-----------PCTETFTGTLQYMAPEVI 748 (1226)
T ss_pred cchhhccCC-----------ccccccccchhhhChHhh
Confidence 998655321 134456689999999986
No 130
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.97 E-value=1.9e-29 Score=298.39 Aligned_cols=149 Identities=15% Similarity=0.103 Sum_probs=129.2
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHH-HHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~-~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
.|+..+.||+|+||.||+|.+. .+++.+|+|.+.......... ..+. +|+.+++.++|+||++++
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~E~~il~~l~~~~i~~~~ 66 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVR------ATGKMYACKKLEKKRIKKRKGESMAL--------NEKQILEKVNSRFVVSLA 66 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEc------CCCceEEEEEEehhhccchHHHHHHH--------HHHHHHHhCCCCCeeeee
Confidence 3788899999999999999965 578899999987643332222 2233 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+.+.+++.+++||||++| +|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 67 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~--~~~l~ 144 (285)
T cd05630 67 YAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHG--HIRIS 144 (285)
T ss_pred EEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCC--CEEEe
Confidence 999999999999999985 999998754555689999999999999999999999999999999999999998 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||++..
T Consensus 145 Dfg~~~~ 151 (285)
T cd05630 145 DLGLAVH 151 (285)
T ss_pred eccceee
Confidence 9999864
No 131
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.97 E-value=3.1e-29 Score=303.51 Aligned_cols=186 Identities=16% Similarity=0.183 Sum_probs=149.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.++||+|+||.||+|.+. .++..+|+|.+.... .......+. +|+++|+.++||||+++
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~------~~~~~~a~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~ 68 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHK------PSGLIMARKLIHLEI-KPAIRNQII--------RELQVLHECNSPYIVGF 68 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEEC------CCCcEEEEEEeeccc-CHHHHHHHH--------HHHHHHHHCCCCcccce
Confidence 468999999999999999999965 467889999986532 222223344 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCCeEecCCCceeEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSL-GIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
+++|.+++.+++||||++| +|.+++. ..+.+++..++.++.|++.||.|||++ +|+||||||+|||++.++ .+|
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~--~~k 144 (333)
T cd06650 69 YGAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG--EIK 144 (333)
T ss_pred eEEEEECCEEEEEEecCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCC--CEE
Confidence 9999999999999999985 9999998 345688999999999999999999985 799999999999999998 899
Q ss_pred EEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCcc
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1678)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~i 378 (1678)
|+|||+++...... .....|+..|+|||++.+..++.++|+|+.|++
T Consensus 145 L~Dfg~~~~~~~~~-------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~i 191 (333)
T cd06650 145 LCDFGVSGQLIDSM-------------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 191 (333)
T ss_pred EeeCCcchhhhhhc-------------cccCCCCccccCHHHhcCCCCCcHHHHHHHHHH
Confidence 99999987432100 011235667777777665555666666666633
No 132
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=9e-28 Score=288.09 Aligned_cols=318 Identities=19% Similarity=0.288 Sum_probs=256.4
Q ss_pred CeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEE
Q 000316 1299 DFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVN 1377 (1678)
Q Consensus 1299 ~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~ 1377 (1678)
.+||+|=..|...++++. ..+++.+.--...|..++|+..|..|+-|+. .=|.+-||++.+...+...+||...++
T Consensus 278 ~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~---klgQLlVweWqsEsYVlKQQgH~~~i~ 354 (893)
T KOG0291|consen 278 NLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCS---KLGQLLVWEWQSESYVLKQQGHSDRIT 354 (893)
T ss_pred eEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCC---ccceEEEEEeeccceeeecccccccee
Confidence 349999999999999987 6789999888889999999999999999996 246999999999999988999999999
Q ss_pred EEeecCCCCcEEeC--CCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCc
Q 000316 1378 DICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNL 1455 (1678)
Q Consensus 1378 sV~fs~~~~~laS~--DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~ 1455 (1678)
+++++|||+.++++ ||.|||||..+|-|..+|..|.. .
T Consensus 355 ~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts----------------------------------------~ 394 (893)
T KOG0291|consen 355 SLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTS----------------------------------------G 394 (893)
T ss_pred eEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCC----------------------------------------c
Confidence 99999999999554 99999999999999999997742 2
Q ss_pred eeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCC-
Q 000316 1456 YTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSG- 1534 (1678)
Q Consensus 1456 vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg- 1534 (1678)
++.+.|+..|+.+++++-||+||.||+...+.-+++.... +....|++.. |.|.++.+|+.|.
T Consensus 395 Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~-----p~QfscvavD-----------~sGelV~AG~~d~F 458 (893)
T KOG0291|consen 395 VTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPE-----PIQFSCVAVD-----------PSGELVCAGAQDSF 458 (893)
T ss_pred eEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCC-----ceeeeEEEEc-----------CCCCEEEeeccceE
Confidence 5667777789999999999999999999999988887543 2223455543 5677888888875
Q ss_pred eEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE--EEEecCCEEE
Q 000316 1535 QCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVI 1611 (1678)
Q Consensus 1535 ~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~La 1611 (1678)
.|.+|++.||+++..+.||+++|.+++ +|++..|+|||+|+|||+||+-... ..+.++.- ...|. +|+|||+.||
T Consensus 459 ~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~-~~vEtl~i-~sdvl~vsfrPdG~ela 536 (893)
T KOG0291|consen 459 EIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSS-GTVETLEI-RSDVLAVSFRPDGKELA 536 (893)
T ss_pred EEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccC-ceeeeEee-ccceeEEEEcCCCCeEE
Confidence 699999999999999999999999999 9999999999999999999997653 33344443 33344 6999999999
Q ss_pred EEeCCC-eEEEecCCCCCC---CCcceec----cceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1612 SISNNK-IGLSSLSKSADE---DGQHRLV----PQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1612 Sgs~D~-I~vwdl~~~~~~---~g~~~~~----~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
+++-|| |.+||....... +|..... ......... .....+.+.+++++||+.+++||..+.|.||+
T Consensus 537 VaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~-sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~ 610 (893)
T KOG0291|consen 537 VATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAEN-SAKGKTFTTICYSADGKCILAGGESNSICIYD 610 (893)
T ss_pred EEEecceEEEEEhhhceeeccccchhhccccccccceeehhh-cccCCceEEEEEcCCCCEEEecCCcccEEEEE
Confidence 999999 999997632211 1111111 111111110 12235789999999999999999999999985
No 133
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.96 E-value=3e-29 Score=326.56 Aligned_cols=175 Identities=18% Similarity=0.147 Sum_probs=138.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|+++++||+|+||.||+|++. ..+..+|+|.+............+. +|+.+|+.|+|||||++
T Consensus 12 l~~YeIl~kLG~GgFGtVYLAkdk------~tg~~vAlKvIk~~~l~e~~~~~~~--------~EI~IL~~L~HPNIVrl 77 (1021)
T PTZ00266 12 LNEYEVIKKIGNGRFGEVFLVKHK------RTQEFFCWKAISYRGLKEREKSQLV--------IEVNVMRELKHKNIVRY 77 (1021)
T ss_pred cCCEEEEEEEecCCCeEEEEEEEC------CCCeEEEEEEEeccccCHHHHHHHH--------HHHHHHHHcCCCCcCeE
Confidence 578999999999999999999975 4678999999876544444444444 89999999999999999
Q ss_pred eeEEEeC--CeEEEeccCCC-CCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhC-------CceecCCCCCCeE
Q 000316 241 LGLLKTS--GLITSVIPKTP-YTLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSL-------GIAHRSVCPSNVL 308 (1678)
Q Consensus 241 ~~~~~~~--~~~~lVmEy~~-g~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~-------gIiHRDLKP~NIL 308 (1678)
+++|.+. ..+||||||++ |+|.++|... ....+++..++.|+.||+.||.|||+. +||||||||+|||
T Consensus 78 ~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNIL 157 (1021)
T PTZ00266 78 IDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIF 157 (1021)
T ss_pred EEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeE
Confidence 9998654 57999999999 4999999742 235689999999999999999999994 5999999999999
Q ss_pred ecCCC---------------ceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccc
Q 000316 309 LTDSC---------------WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 309 l~~~g---------------~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 361 (1678)
|+.+. ...+||+|||+++...... ....+.||+.|+|||++
T Consensus 158 L~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s------------~~~s~vGTp~YmAPEvL 213 (1021)
T PTZ00266 158 LSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES------------MAHSCVGTPYYWSPELL 213 (1021)
T ss_pred eecCccccccccccccccCCCCceEEccCCccccccccc------------cccccCCCccccCHHHH
Confidence 96531 1258999999997532110 01123467777777764
No 134
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=1e-27 Score=259.99 Aligned_cols=285 Identities=18% Similarity=0.241 Sum_probs=227.9
Q ss_pred eeEEeccccccEEEEEEecC-CCEEEEEecCCCCCCeEEEEeCCC---CeEEEEE-ecCCccEEEEeecCCCCcE--EeC
Q 000316 1319 ILSSIRAHHGALRSVAVGQD-ECTVFTAGIGPGFKGTVQKWELTR---INCVSGY-YGHEEVVNDICVLSSSGRI--ASC 1391 (1678)
Q Consensus 1319 ~l~tl~gH~~~V~svafspd-g~~LaSgS~d~~~DgtVrlWDl~t---g~~l~~l-~gH~~~V~sV~fs~~~~~l--aS~ 1391 (1678)
.++++.||.+.|..++|+|- |..|+|||. |+.||+|+... -.|...+ .+|+..|.+|+|+|.+++| ||.
T Consensus 6 ~~~~~~gh~~r~W~~awhp~~g~ilAscg~----Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSF 81 (312)
T KOG0645|consen 6 LEQKLSGHKDRVWSVAWHPGKGVILASCGT----DKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASF 81 (312)
T ss_pred eEEeecCCCCcEEEEEeccCCceEEEeecC----CceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeec
Confidence 47889999999999999998 899999998 99999999984 4555544 4899999999999999998 555
Q ss_pred CCcEEEEECCCC--ceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEE
Q 000316 1392 DGTLHVWNSQTG--KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLV 1469 (1678)
Q Consensus 1392 DgtVrIWD~~tg--~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~La 1469 (1678)
|.|+.||.-..+ +++.++.+|. +.|.|++++++|++||
T Consensus 82 D~t~~Iw~k~~~efecv~~lEGHE----------------------------------------nEVK~Vaws~sG~~LA 121 (312)
T KOG0645|consen 82 DATVVIWKKEDGEFECVATLEGHE----------------------------------------NEVKCVAWSASGNYLA 121 (312)
T ss_pred cceEEEeecCCCceeEEeeeeccc----------------------------------------cceeEEEEcCCCCEEE
Confidence 999999986544 5667777653 2356777777899999
Q ss_pred EEECCCcEEEEECCCC---eeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCC---
Q 000316 1470 VGIGNGSLRFIDINQG---QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRS--- 1543 (1678)
Q Consensus 1470 sgs~DgtVrlWDl~tg---~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~t--- 1543 (1678)
+++.|+.|-+|.+..+ +++..++.|+ ..|.-+.|.|.. .+|+++|.|.+|++|+-..
T Consensus 122 TCSRDKSVWiWe~deddEfec~aVL~~Ht------qDVK~V~WHPt~-----------dlL~S~SYDnTIk~~~~~~ddd 184 (312)
T KOG0645|consen 122 TCSRDKSVWIWEIDEDDEFECIAVLQEHT------QDVKHVIWHPTE-----------DLLFSCSYDNTIKVYRDEDDDD 184 (312)
T ss_pred EeeCCCeEEEEEecCCCcEEEEeeecccc------ccccEEEEcCCc-----------ceeEEeccCCeEEEEeecCCCC
Confidence 9999999999998754 4566677654 446777877543 4899999999999998763
Q ss_pred CcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEEEEecCCEEEEEeCCC-eEEE
Q 000316 1544 GNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNK-IGLS 1621 (1678)
Q Consensus 1544 g~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~afSpdg~~LaSgs~D~-I~vw 1621 (1678)
-.+++++.+|...|++++ .+.|..|+|++.|++|+||...+.. -.-|+..++.++.+...++|++.|. |++|
T Consensus 185 W~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~~------~~~~sr~~Y~v~W~~~~IaS~ggD~~i~lf 258 (312)
T KOG0645|consen 185 WECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTDL------SGMHSRALYDVPWDNGVIASGGGDDAIRLF 258 (312)
T ss_pred eeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccCc------chhcccceEeeeecccceEeccCCCEEEEE
Confidence 368999999999999999 8889999999999999999977652 1347788888777778899998888 9999
Q ss_pred ecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecC-CCEEEEEeCCCcEEEc
Q 000316 1622 SLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPF-SRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1622 dl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd-~~lLatgs~DG~IrIw 1677 (1678)
.-+...+.... ++..... ..|...|++++|+|. ..+|++||+||.|++|
T Consensus 259 ~~s~~~d~p~~------~l~~~~~-~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W 308 (312)
T KOG0645|consen 259 KESDSPDEPSW------NLLAKKE-GAHEVDVNSVQWNPKVSNRLASGGDDGIVNFW 308 (312)
T ss_pred EecCCCCCchH------HHHHhhh-cccccccceEEEcCCCCCceeecCCCceEEEE
Confidence 86522111111 1111111 258889999999995 6789999999999999
No 135
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.96 E-value=3.5e-29 Score=294.84 Aligned_cols=143 Identities=15% Similarity=0.094 Sum_probs=122.0
Q ss_pred eeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeCCe
Q 000316 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGL 249 (1678)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~~~ 249 (1678)
||+|+||.||+++++ .++..+|+|.+.............. ..|+++++.++||||+++++++.++..
T Consensus 1 lg~G~~g~Vy~~~~~------~~~~~~a~K~~~~~~~~~~~~~~~~-------~~E~~il~~l~hp~i~~~~~~~~~~~~ 67 (277)
T cd05607 1 LGKGGFGEVCAVQVK------NTGKMYACKKLDKKRLKKKSGEKMA-------LLEKEILEKVNSPFIVNLAYAFESKTH 67 (277)
T ss_pred CCCCCceEEEEEEEc------cCCcEEEEEEEcHHHhhcchhhHHH-------HHHHHHHHhcCCCcEEEEEEEEecCCe
Confidence 799999999999965 4688999999865332221112222 279999999999999999999999999
Q ss_pred EEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCccc
Q 000316 250 ITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1678)
Q Consensus 250 ~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~ 327 (1678)
+|+||||++| +|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.++ .+||+|||++..
T Consensus 68 ~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~--~~~l~Dfg~~~~ 144 (277)
T cd05607 68 LCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQG--NCRLSDLGLAVE 144 (277)
T ss_pred EEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCC--CEEEeeceeeee
Confidence 9999999985 999888754555688999999999999999999999999999999999999998 899999999874
No 136
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.96 E-value=4e-29 Score=301.57 Aligned_cols=145 Identities=18% Similarity=0.217 Sum_probs=125.5
Q ss_pred Eeeeeeee--CcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeE
Q 000316 166 PIAFIGIC--SYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1678)
Q Consensus 166 ~~~~IG~G--~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~ 243 (1678)
++++||+| +|++||++.++ .++..||+|.+...... ....++++ +|+.+++.++||||++++++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~------~~~~~vaiK~~~~~~~~-~~~~~~~~-------~e~~~l~~l~hpniv~~~~~ 67 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYK------PTGEYVTVRRINLEACT-NEMVTFLQ-------GELHVSKLFNHPNIVPYRAT 67 (327)
T ss_pred hhhhccccccceEEEEEEeec------ccCcEEEEEEechhhcc-HHHHHHHH-------HHHHHHHhcCCCCeeeEEEE
Confidence 56889999 78899999965 57899999998764333 23334443 89999999999999999999
Q ss_pred EEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEec
Q 000316 244 LKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1678)
Q Consensus 244 ~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DF 322 (1678)
+..++..|+||||++ |+|.+++.......+++..++.++.|++.||+|||++||+||||||+|||++.++ .+|++||
T Consensus 68 ~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~--~~~l~~~ 145 (327)
T cd08227 68 FIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDG--KVYLSGL 145 (327)
T ss_pred EEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCC--cEEEccc
Confidence 999999999999999 5999999754445689999999999999999999999999999999999999998 8999999
Q ss_pred CCcc
Q 000316 323 PLVG 326 (1678)
Q Consensus 323 GlA~ 326 (1678)
|.+.
T Consensus 146 ~~~~ 149 (327)
T cd08227 146 RSNL 149 (327)
T ss_pred chhh
Confidence 8654
No 137
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=99.96 E-value=1e-29 Score=287.90 Aligned_cols=277 Identities=16% Similarity=0.252 Sum_probs=229.9
Q ss_pred ccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcEEeC--CCcEEEEECCCC
Q 000316 1326 HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTG 1403 (1678)
Q Consensus 1326 H~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~laS~--DgtVrIWD~~tg 1403 (1678)
-...|..|.|.|+|+.|++|+. .|.+.+|+..+-..-..+++|..+|.++.|++++..+.|+ ||.||+|+....
T Consensus 95 vkc~V~~v~WtPeGRRLltgs~----SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmn 170 (464)
T KOG0284|consen 95 VKCPVNVVRWTPEGRRLLTGSQ----SGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMN 170 (464)
T ss_pred cccceeeEEEcCCCceeEeecc----cccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchh
Confidence 3458999999999999999997 7999999986655555667999999999999999999766 799999998754
Q ss_pred ceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECC
Q 000316 1404 KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDIN 1483 (1678)
Q Consensus 1404 ~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~ 1483 (1678)
.. +.+..| +...|++++++|+...++++|.||+|+|||..
T Consensus 171 nV-k~~~ah---------------------------------------h~eaIRdlafSpnDskF~t~SdDg~ikiWdf~ 210 (464)
T KOG0284|consen 171 NV-KIIQAH---------------------------------------HAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFR 210 (464)
T ss_pred hh-HHhhHh---------------------------------------hhhhhheeccCCCCceeEEecCCCeEEEEecc
Confidence 32 222221 11236778888889999999999999999999
Q ss_pred CCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-c
Q 000316 1484 QGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-A 1562 (1678)
Q Consensus 1484 tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-s 1562 (1678)
..+.-..+.+|. -.|.+++|.+.. .+||+|+.|..|++||.++|+++.++.+|+..|.++. .
T Consensus 211 ~~kee~vL~GHg------wdVksvdWHP~k-----------gLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~ 273 (464)
T KOG0284|consen 211 MPKEERVLRGHG------WDVKSVDWHPTK-----------GLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFN 273 (464)
T ss_pred CCchhheeccCC------CCcceeccCCcc-----------ceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEc
Confidence 888777777654 448889887544 5899999999999999999999999999999999999 9
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEE--EEec-CCEEEEEeCCC-eEEEecCCCCCCCCcceeccc
Q 000316 1563 PEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVW-GQDVISISNNK-IGLSSLSKSADEDGQHRLVPQ 1638 (1678)
Q Consensus 1563 pdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpd-g~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~ 1638 (1678)
+++++|+|+|.|.+++++|+++. +.+.++++|..-|++ ++|- ..++++|+.|+ |..|.+... .
T Consensus 274 ~n~N~Llt~skD~~~kv~DiR~m--kEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~------~----- 340 (464)
T KOG0284|consen 274 PNGNWLLTGSKDQSCKVFDIRTM--KELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLE------E----- 340 (464)
T ss_pred CCCCeeEEccCCceEEEEehhHh--HHHHHhhcchhhheeeccccccccceeeccCCCceEEEecccc------c-----
Confidence 99999999999999999999966 667899999999996 6776 45677889999 999997411 0
Q ss_pred eeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1639 KLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1639 kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
.+-. -...|...|++++|+|-|.+|++|+.|.++|+|.
T Consensus 341 p~~~--i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~ 378 (464)
T KOG0284|consen 341 PLGE--IPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWT 378 (464)
T ss_pred cccC--CCcccccceeeeeccccceeEeecCCCcceeeec
Confidence 1111 1125889999999999999999999999999993
No 138
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=4.6e-31 Score=334.81 Aligned_cols=177 Identities=19% Similarity=0.183 Sum_probs=146.5
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.-+++...+||.|.||.||-|.+. .+|...|+|-++............. +|..+|..++|||+|++
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~------~tGellAvKEI~iq~~~~k~~~~i~--------eEm~vlE~lnHpNlV~Y 1299 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNL------DTGELLAVKEIKIQDSDHKTFKLIA--------EEMKVLEGLNHPNLVRY 1299 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecC------CccchhhhhhhhcCccccccCcchH--------HHHHHHHhccCcccccc
Confidence 347889999999999999999853 7899999999876544322222222 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
||+-.+.+.++|.||||. |+|.+++. .++..++...+.|..|++.|+.|||++|||||||||+||+++.+| .+|+
T Consensus 1300 yGVEvHRekv~IFMEyC~~GsLa~ll~--~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g--~iK~ 1375 (1509)
T KOG4645|consen 1300 YGVEVHREKVYIFMEYCEGGSLASLLE--HGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNG--LIKY 1375 (1509)
T ss_pred CceeecHHHHHHHHHHhccCcHHHHHH--hcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCC--cEEe
Confidence 999999999999999999 59999998 566678888899999999999999999999999999999999999 9999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
.|||.|+......+... +. .....||+.|||||++.
T Consensus 1376 ~DFGsa~ki~~~~~~~~------~e-l~~~~GT~~YMAPEvit 1411 (1509)
T KOG4645|consen 1376 GDFGSAVKIKNNAQTMP------GE-LQSMMGTPMYMAPEVIT 1411 (1509)
T ss_pred ecccceeEecCchhcCC------HH-HHhhcCCchhcCchhhc
Confidence 99999997653211111 11 12456899999999864
No 139
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.96 E-value=1.2e-29 Score=293.09 Aligned_cols=286 Identities=17% Similarity=0.266 Sum_probs=235.8
Q ss_pred CceeEEeccccccEEEEEEec-CCCEEEEEecCCCCCCeEEEEeCCC-CeEEEEEecCCccEEEEeecCCCCcE--EeCC
Q 000316 1317 ASILSSIRAHHGALRSVAVGQ-DECTVFTAGIGPGFKGTVQKWELTR-INCVSGYYGHEEVVNDICVLSSSGRI--ASCD 1392 (1678)
Q Consensus 1317 ~~~l~tl~gH~~~V~svafsp-dg~~LaSgS~d~~~DgtVrlWDl~t-g~~l~~l~gH~~~V~sV~fs~~~~~l--aS~D 1392 (1678)
...+.++.||+..|.++.|.| .+.+|+|||. |+.|+||++-+ ++|+++|.||..+|.+++|+.++..+ +|.|
T Consensus 204 kk~~~~~~gH~kgvsai~~fp~~~hLlLS~gm----D~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD 279 (503)
T KOG0282|consen 204 KKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGM----DGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFD 279 (503)
T ss_pred HhheeeccCCccccchhhhccceeeEEEecCC----CceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecc
Confidence 456889999999999999999 8899999998 99999999866 99999999999999999999999888 5669
Q ss_pred CcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCC-CEEEEE
Q 000316 1393 GTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECV-ERLVVG 1471 (1678)
Q Consensus 1393 gtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g-~~Lasg 1471 (1678)
++|++||++||+++..+... ...+|+.++|++ +.+++|
T Consensus 280 ~~lKlwDtETG~~~~~f~~~-----------------------------------------~~~~cvkf~pd~~n~fl~G 318 (503)
T KOG0282|consen 280 RFLKLWDTETGQVLSRFHLD-----------------------------------------KVPTCVKFHPDNQNIFLVG 318 (503)
T ss_pred eeeeeeccccceEEEEEecC-----------------------------------------CCceeeecCCCCCcEEEEe
Confidence 99999999999999888642 124666777777 889999
Q ss_pred ECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEe
Q 000316 1472 IGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR 1551 (1678)
Q Consensus 1472 s~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~ 1551 (1678)
+.|+.|+.||+|+++.++.+..|. +.|..+.|. ++|..+++.++|++++||+.+.+-.++...
T Consensus 319 ~sd~ki~~wDiRs~kvvqeYd~hL------g~i~~i~F~-----------~~g~rFissSDdks~riWe~~~~v~ik~i~ 381 (503)
T KOG0282|consen 319 GSDKKIRQWDIRSGKVVQEYDRHL------GAILDITFV-----------DEGRRFISSSDDKSVRIWENRIPVPIKNIA 381 (503)
T ss_pred cCCCcEEEEeccchHHHHHHHhhh------hheeeeEEc-----------cCCceEeeeccCccEEEEEcCCCccchhhc
Confidence 999999999999999998887544 346777764 556799999999999999999987665543
Q ss_pred -ccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCC-CCCeEeecCCCCEE----EEEecCCEEEEEeCCC-eEEEec
Q 000316 1552 -AHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWP-SQPTVFKGHTNGIS----GFSVWGQDVISISNNK-IGLSSL 1623 (1678)
Q Consensus 1552 -gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~-~~~~~l~gH~~~V~----afSpdg~~LaSgs~D~-I~vwdl 1623 (1678)
.+.....+|. +|++.+++.-|.|+.|.++.+..... .....++||..+-. .|||||++|++|+.|| +.+||.
T Consensus 382 ~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdw 461 (503)
T KOG0282|consen 382 DPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDW 461 (503)
T ss_pred chhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeec
Confidence 2233455777 99999999999999999999765321 22236788876433 4999999999999999 999996
Q ss_pred CCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCC-CEEEEEeCCCcEEEcC
Q 000316 1624 SKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFS-RLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1624 ~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~-~lLatgs~DG~IrIwd 1678 (1678)
. ..+++... ..|.+++..+.|+|.. ..+||||+||.|++|+
T Consensus 462 k------------t~kl~~~l--kah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 462 K------------TTKLVSKL--KAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred h------------hhhhhhcc--ccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 4 12333322 2488999999999976 5799999999999997
No 140
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=1.5e-28 Score=260.99 Aligned_cols=275 Identities=18% Similarity=0.251 Sum_probs=229.0
Q ss_pred cccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCC
Q 000316 1276 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFK 1352 (1678)
Q Consensus 1276 ~~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~D 1352 (1678)
..++.+|++.|.+ |+.||.+ ..+++.|+++++||.. |.+++++.||...|..++.+.|...+++||. |
T Consensus 10 ~~~l~~~qgaV~avryN~dGnY-----~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~Gg----D 80 (307)
T KOG0316|consen 10 LSILDCAQGAVRAVRYNVDGNY-----CLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGG----D 80 (307)
T ss_pred ceeecccccceEEEEEccCCCE-----EEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCC----C
Confidence 4567788999987 8999987 9999999999999977 8999999999999999999999999999997 9
Q ss_pred CeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcEEeC--CCcEEEEECCCC--ceeEEecccCccccccCCCCCCccc
Q 000316 1353 GTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTG--KLLSVFAEQSMDSLHGGSPSSSISK 1428 (1678)
Q Consensus 1353 gtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~laS~--DgtVrIWD~~tg--~~~~~l~~~~~~~~~~~s~s~~~~~ 1428 (1678)
+.|.+||++||+..+.+.||.+.|+.|+|+.+...++|+ |.++++||.++. ++++.+...
T Consensus 81 k~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea---------------- 144 (307)
T KOG0316|consen 81 KAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEA---------------- 144 (307)
T ss_pred ceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhh----------------
Confidence 999999999999999999999999999999888888665 999999999865 345544421
Q ss_pred cccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEE
Q 000316 1429 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAIC 1508 (1678)
Q Consensus 1429 ~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva 1508 (1678)
...|.++... +..+++|+.||++|.||++.|+....+- ...|+|++
T Consensus 145 --------------~D~V~Si~v~------------~heIvaGS~DGtvRtydiR~G~l~sDy~--------g~pit~vs 190 (307)
T KOG0316|consen 145 --------------KDGVSSIDVA------------EHEIVAGSVDGTVRTYDIRKGTLSSDYF--------GHPITSVS 190 (307)
T ss_pred --------------cCceeEEEec------------ccEEEeeccCCcEEEEEeecceeehhhc--------CCcceeEE
Confidence 2223333333 4589999999999999999998765443 44589998
Q ss_pred eeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE---cCCCCEEEEEeCCCcEEEEEcCCC
Q 000316 1509 ACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA---APEDHLLVSSSLDKTLRIWDLRRN 1585 (1678)
Q Consensus 1509 ~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva---spdg~~LaSgS~DgtI~IWDl~~~ 1585 (1678)
|+ ++|++..+|+-|+++++.|-.||++++.++||...-..+. ......+++||.||.|.+||+.+.
T Consensus 191 ~s-----------~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~ 259 (307)
T KOG0316|consen 191 FS-----------KDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDE 259 (307)
T ss_pred ec-----------CCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEEeccc
Confidence 86 5668999999999999999999999999999987766655 445579999999999999999987
Q ss_pred CCCCCeEeecCCCC-EEE--EEecCCEEEEEeCCCeEEEe
Q 000316 1586 WPSQPTVFKGHTNG-ISG--FSVWGQDVISISNNKIGLSS 1622 (1678)
Q Consensus 1586 ~~~~~~~l~gH~~~-V~a--fSpdg~~LaSgs~D~I~vwd 1622 (1678)
..+..+..|... |.+ +.|.-..+++++..++..|-
T Consensus 260 --~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~~~~~~~~ 297 (307)
T KOG0316|consen 260 --TQISKLSVVSTVIVTDLSCHPTMDDFITATGHGDLFWY 297 (307)
T ss_pred --eeeeeeccCCceeEEeeecccCccceeEecCCceecee
Confidence 556677766666 444 66767778888777777775
No 141
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=7.1e-31 Score=283.97 Aligned_cols=149 Identities=23% Similarity=0.356 Sum_probs=127.5
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+.+.-+.||-|+||+||-+.+. ++|+.||+|++..-...-...+. .++|+++|..++|.||+..
T Consensus 52 q~Di~PDRPIGYGAFGVVWsVTDP------RdgrrvalkK~pnvfq~L~s~kr--------vFre~kmLcfFkHdNVLSa 117 (449)
T KOG0664|consen 52 QQDIQPDRPIGYGAFGVVWSVTDP------RSGKRVALKKMPNVFQNLASCKR--------VFREIKMLSSFRHDNVLSL 117 (449)
T ss_pred cccCCCCCcccccceeEEEeccCC------CCccchhHhhcchHHHHHHHHHH--------HHHHHHHHHhhccccHHHH
Confidence 446677889999999999988865 68999999997542111122222 3499999999999999999
Q ss_pred eeEEEeCC-----eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCce
Q 000316 241 LGLLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1678)
Q Consensus 241 ~~~~~~~~-----~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~ 315 (1678)
++..+-.. .+|+|.|.|..||..+|- ....++..+++-+++||++||.|||+.||+||||||.|+|++.+.
T Consensus 118 LDILQPph~dfFqEiYV~TELmQSDLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNC-- 193 (449)
T KOG0664|consen 118 LDILQPANPSFFQELYVLTELMQSDLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNC-- 193 (449)
T ss_pred HHhcCCCCchHHHHHHHHHHHHHhhhhheec--cCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCc--
Confidence 99887654 689999999999999998 566789999999999999999999999999999999999999999
Q ss_pred eEEEEecCCccc
Q 000316 316 WLYICDKPLVGF 327 (1678)
Q Consensus 316 ~lKL~DFGlA~~ 327 (1678)
.+||||||+||.
T Consensus 194 vLKICDFGLARv 205 (449)
T KOG0664|consen 194 ILKICDFGLART 205 (449)
T ss_pred eEEecccccccc
Confidence 999999999984
No 142
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.96 E-value=9.7e-29 Score=291.27 Aligned_cols=148 Identities=24% Similarity=0.273 Sum_probs=130.3
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.+.||+|+||.||+|.+. .++..+|+|.+............+. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~vK~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~i~~~~~ 66 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDR------ETGETVALKKVALRRLEGGIPNQAL--------REIKALQACQHPYVVKLLD 66 (286)
T ss_pred CceEEeecccCCCcEEEEEEEC------CCCceEEEEEEEcccccchhhHHHH--------HHHHHHHhCCCCCCcceee
Confidence 5899999999999999999964 4678999999876543333333444 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEec
Q 000316 243 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DF 322 (1678)
++..+...|+||||+.++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||+||
T Consensus 67 ~~~~~~~~~~v~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~--~~~l~df 143 (286)
T cd07832 67 VFPHGSGFVLVMEYMPSDLSEVLRDE-ERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADG--VLKIADF 143 (286)
T ss_pred EEecCCeeEEEecccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCC--cEEEeee
Confidence 99999999999999966999999743 36689999999999999999999999999999999999999988 8999999
Q ss_pred CCccc
Q 000316 323 PLVGF 327 (1678)
Q Consensus 323 GlA~~ 327 (1678)
|+++.
T Consensus 144 g~~~~ 148 (286)
T cd07832 144 GLARL 148 (286)
T ss_pred eeccc
Confidence 99874
No 143
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.96 E-value=1.4e-28 Score=286.19 Aligned_cols=148 Identities=16% Similarity=0.122 Sum_probs=128.3
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHH---HHHHHhcCCCchhHHHhhccCCCCccc
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES---KNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~---~~~l~~~~~~~~~Ei~iL~~l~HpNIV 238 (1678)
+.|++.+.||+|+||.||+|.+. .++..+|+|.+.......... ..+. +|+++++.++||||+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~------~~~~~~~lk~~~~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~ 67 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDV------DTGRELAVKQVPFDPDSPETKKEVNALE--------CEIQLLKNLQHERIV 67 (263)
T ss_pred CcccccceecCCCceEEEEEEEc------CCCcEEEEEEEeecccchhhHHHHHHHH--------HHHHHHHhCCCCCee
Confidence 46899999999999999999864 467899999987543322211 2222 899999999999999
Q ss_pred ceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 239 ~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++++++.+++.+++||||++| +|.+++. ....+++..++.++.|++.||.|||++||+||||||+||+++.++ .+
T Consensus 68 ~~~~~~~~~~~~~~v~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~--~~ 143 (263)
T cd06625 68 QYYGCLRDDETLSIFMEYMPGGSVKDQLK--AYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAG--NV 143 (263)
T ss_pred eeEEEEccCCeEEEEEEECCCCcHHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC--CE
Confidence 999999999999999999985 9999998 345688999999999999999999999999999999999999988 89
Q ss_pred EEEecCCccc
Q 000316 318 YICDKPLVGF 327 (1678)
Q Consensus 318 KL~DFGlA~~ 327 (1678)
||+|||+++.
T Consensus 144 ~l~dfg~~~~ 153 (263)
T cd06625 144 KLGDFGASKR 153 (263)
T ss_pred EEeeccccee
Confidence 9999999863
No 144
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.96 E-value=3.9e-30 Score=298.02 Aligned_cols=190 Identities=17% Similarity=0.219 Sum_probs=167.7
Q ss_pred eeE--eeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 164 LFP--IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 164 y~~--~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
|++ .+.||.|.||+||-|+++ .+|+.||||+|.+.+...... ..++ +|+.||+.++||.||.+.
T Consensus 564 YQif~devLGSGQFG~VYgg~hR------ktGrdVAvKvIdKlrFp~kqe-sqlR-------~EVaILq~l~HPGiV~le 629 (888)
T KOG4236|consen 564 YQIFADEVLGSGQFGTVYGGKHR------KTGRDVAVKVIDKLRFPTKQE-SQLR-------NEVAILQNLHHPGIVNLE 629 (888)
T ss_pred HHhhhHhhccCCcceeeecceec------ccCceeeeeeeecccCCCchH-HHHH-------HHHHHHHhcCCCCeeEEE
Confidence 544 689999999999999976 689999999999877766554 3444 999999999999999999
Q ss_pred eEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc-eeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-SWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~-~~lKL~ 320 (1678)
..|++.+.+++|||.+.||+.+.|-.+..+++++...++++.||+.||.|||.++|+|+||||||||+.+... .++|||
T Consensus 630 ~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlC 709 (888)
T KOG4236|consen 630 CMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLC 709 (888)
T ss_pred EeecCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeec
Confidence 9999999999999999998888887778899999999999999999999999999999999999999986533 689999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||+||..... .+....+|||.|.|||+++.+.|+...|+|+.|.|.
T Consensus 710 DFGfARiIgEk------------sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIi 756 (888)
T KOG4236|consen 710 DFGFARIIGEK------------SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVII 756 (888)
T ss_pred cccceeecchh------------hhhhhhcCCccccCHHHHhhccccccccceeeeEEE
Confidence 99999975521 123446799999999999999999999999999775
No 145
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=2.8e-29 Score=283.62 Aligned_cols=286 Identities=15% Similarity=0.216 Sum_probs=220.6
Q ss_pred cccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC----CceeEEeccccccEEEEEEecCCCEEEEEecCC
Q 000316 1276 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK----ASILSSIRAHHGALRSVAVGQDECTVFTAGIGP 1349 (1678)
Q Consensus 1276 ~~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~----~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~ 1349 (1678)
.+.+..|++.||. ||++|++ |||||.|.+..+|++. -+..+++.||..+|.-+.||||.++|++||.
T Consensus 217 ~qil~~htdEVWfl~FS~nGky-----LAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~-- 289 (519)
T KOG0293|consen 217 WQILQDHTDEVWFLQFSHNGKY-----LASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGF-- 289 (519)
T ss_pred hhhHhhCCCcEEEEEEcCCCee-----EeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCc--
Confidence 4567889999996 9999998 9999999999999966 2368899999999999999999999999996
Q ss_pred CCCCeEEEEeCCCCeEEEEEe-cCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCcc--ccccCCCCC
Q 000316 1350 GFKGTVQKWELTRINCVSGYY-GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMD--SLHGGSPSS 1424 (1678)
Q Consensus 1350 ~~DgtVrlWDl~tg~~l~~l~-gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~--~~~~~s~s~ 1424 (1678)
|..+++||+.+|.+...+. +|...+.+++|.|++..+ +|.|+++..||+. |..+....+-... ...+.++++
T Consensus 290 --~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD-gn~~~~W~gvr~~~v~dlait~Dg 366 (519)
T KOG0293|consen 290 --DEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLD-GNILGNWEGVRDPKVHDLAITYDG 366 (519)
T ss_pred --hHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCC-cchhhcccccccceeEEEEEcCCC
Confidence 8899999999999988875 567999999999999988 4559999999986 4433333322111 112223344
Q ss_pred CccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcc
Q 000316 1425 SISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLV 1504 (1678)
Q Consensus 1425 ~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V 1504 (1678)
..+.+...+..+...+.....-..+.-....++++.++.+++++++.-.+..+++||+.....+..+.||.. ...+
T Consensus 367 k~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq----~~fi 442 (519)
T KOG0293|consen 367 KYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQ----GHFI 442 (519)
T ss_pred cEEEEEecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccc----cceE
Confidence 333222222211111110000011222334588899999999999999999999999998888988988864 3346
Q ss_pred eEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cC-CCCEEEEEeCCCcEEEEEc
Q 000316 1505 SAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-AP-EDHLLVSSSLDKTLRIWDL 1582 (1678)
Q Consensus 1505 ~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-sp-dg~~LaSgS~DgtI~IWDl 1582 (1678)
-.-||.+. +..++|+||+|+.|+||+.++|+++..+.||...|++|+ .| +..++||||.||+||||..
T Consensus 443 IrSCFgg~----------~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~ 512 (519)
T KOG0293|consen 443 IRSCFGGG----------NDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGP 512 (519)
T ss_pred EEeccCCC----------CcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecC
Confidence 66677653 347999999999999999999999999999999999999 55 4469999999999999987
Q ss_pred CCC
Q 000316 1583 RRN 1585 (1678)
Q Consensus 1583 ~~~ 1585 (1678)
...
T Consensus 513 ~~~ 515 (519)
T KOG0293|consen 513 SDN 515 (519)
T ss_pred Ccc
Confidence 653
No 146
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.96 E-value=7e-29 Score=292.53 Aligned_cols=149 Identities=19% Similarity=0.243 Sum_probs=130.6
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++++.||+|+||.||+|++. .++..+|||.+............+. +|+++++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~i~~~~~ 66 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNK------LTGEVVALKKIRLDTETEGVPSTAI--------REISLLKELNHPNIVKLLD 66 (284)
T ss_pred CceeeeeecCCCceEEEEEEEC------CCCCEEEEEEccccccccccchHHH--------HHHHHHHhcCCCCCcchhh
Confidence 4899999999999999999964 4678999999865432222222333 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEec
Q 000316 243 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DF 322 (1678)
++.+++..++||||++++|.+++...+...+++..++.++.|++.||+|||++|++||||||+||+++.++ .+||+||
T Consensus 67 ~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~--~~~l~df 144 (284)
T cd07860 67 VIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG--AIKLADF 144 (284)
T ss_pred hcccCCcEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEeec
Confidence 99999999999999998999999865667789999999999999999999999999999999999999999 8999999
Q ss_pred CCccc
Q 000316 323 PLVGF 327 (1678)
Q Consensus 323 GlA~~ 327 (1678)
|+++.
T Consensus 145 g~~~~ 149 (284)
T cd07860 145 GLARA 149 (284)
T ss_pred cchhh
Confidence 99863
No 147
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=99.96 E-value=7e-28 Score=277.24 Aligned_cols=276 Identities=18% Similarity=0.265 Sum_probs=234.9
Q ss_pred eecCCCCCCCCCeEEEEeCCCCEEEEeCCCceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEE
Q 000316 1288 FPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVS 1367 (1678)
Q Consensus 1288 ~fSpdg~~~~~~~LasgS~D~~v~lWd~~~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~ 1367 (1678)
+++.+|.. ||+|+.||.+++|+..|.++.+|..|.++|.++.|+.+|.+|+|||. |+++.+||..+|+..+
T Consensus 242 ~Wn~~G~~-----LatG~~~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~v----D~ttilwd~~~g~~~q 312 (524)
T KOG0273|consen 242 DWNNDGTL-----LATGSEDGEARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGV----DGTTILWDAHTGTVKQ 312 (524)
T ss_pred EecCCCCe-----EEEeecCcEEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccC----CccEEEEeccCceEEE
Confidence 37788886 99999999999999999999999999999999999999999999998 9999999999999999
Q ss_pred EEecCCccEEEEeecCCCCcEEe-CCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCe
Q 000316 1368 GYYGHEEVVNDICVLSSSGRIAS-CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGI 1446 (1678)
Q Consensus 1368 ~l~gH~~~V~sV~fs~~~~~laS-~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v 1446 (1678)
.+.-|+.+-.+|.|-.++....+ .|+.|+++.+....++.++.+|. ++
T Consensus 313 ~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~------------------------------g~- 361 (524)
T KOG0273|consen 313 QFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHH------------------------------GE- 361 (524)
T ss_pred eeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeeccc------------------------------Cc-
Confidence 99999999888999655554433 39999999998888888887653 33
Q ss_pred EEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCE
Q 000316 1447 LSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSW 1526 (1678)
Q Consensus 1447 ~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~ 1526 (1678)
|.++.|.|.|..|+++|.|+|++||....+.+.+.+.+| ...|..+.++|...... -...+..
T Consensus 362 ---------V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~H------skei~t~~wsp~g~v~~--n~~~~~~ 424 (524)
T KOG0273|consen 362 ---------VNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAH------SKEIYTIKWSPTGPVTS--NPNMNLM 424 (524)
T ss_pred ---------eEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhh------ccceeeEeecCCCCccC--CCcCCce
Confidence 455555566999999999999999999999888888865 44577788876554222 2245678
Q ss_pred EEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE--EE
Q 000316 1527 IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GF 1603 (1678)
Q Consensus 1527 LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--af 1603 (1678)
+++++.|++|++||+..|.++.+|..|..+|.+|+ +|+|+++|||+.||.|.||+++++ +..+.+.+ ++.|. +|
T Consensus 425 l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~--~l~~s~~~-~~~Ifel~W 501 (524)
T KOG0273|consen 425 LASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTG--KLVKSYQG-TGGIFELCW 501 (524)
T ss_pred EEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccch--heeEeecC-CCeEEEEEE
Confidence 99999999999999999999999999999999999 999999999999999999999998 44445554 55566 68
Q ss_pred EecCCEEEEEeCCC-eEEEec
Q 000316 1604 SVWGQDVISISNNK-IGLSSL 1623 (1678)
Q Consensus 1604 Spdg~~LaSgs~D~-I~vwdl 1623 (1678)
+.+|.+|..+-.|+ +.+-|+
T Consensus 502 n~~G~kl~~~~sd~~vcvldl 522 (524)
T KOG0273|consen 502 NAAGDKLGACASDGSVCVLDL 522 (524)
T ss_pred cCCCCEEEEEecCCCceEEEe
Confidence 88899998887777 888775
No 148
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.96 E-value=1.7e-28 Score=291.44 Aligned_cols=149 Identities=19% Similarity=0.229 Sum_probs=128.4
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh--HHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG--QESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
+|++.+.||+|+||.||+|.+. .++..||+|.+....... ......+ .+|+++++.++||||+++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~------~~~~~v~iK~~~~~~~~~~~~~~~~~~-------~~e~~~l~~~~h~~i~~~ 67 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDK------ETGRIVAIKKIKLGERKEAKDGINFTA-------LREIKLLQELKHPNIIGL 67 (298)
T ss_pred CceeeeeeeeccccEEEEEEEC------CCCcEEEEEEEeccccccccchhhHHH-------HHHHHHHhhcCCCCChhh
Confidence 5889999999999999999964 457899999997653331 1111222 289999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
++++.+.+.+++||||+.++|.+++... ...+++..++.++.||++||.|||++||+||||||+||+++.++ .+||+
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~L~~~i~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~--~~~l~ 144 (298)
T cd07841 68 LDVFGHKSNINLVFEFMETDLEKVIKDK-SIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDG--VLKLA 144 (298)
T ss_pred hheeecCCEEEEEEcccCCCHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCC--CEEEc
Confidence 9999999999999999977999999832 23689999999999999999999999999999999999999999 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||+++.
T Consensus 145 dfg~~~~ 151 (298)
T cd07841 145 DFGLARS 151 (298)
T ss_pred cceeeee
Confidence 9999874
No 149
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.96 E-value=1.1e-28 Score=291.97 Aligned_cols=148 Identities=22% Similarity=0.278 Sum_probs=129.6
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.++ .++..||+|.+....... ....+. +|+.+++.++||||+++
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~------~~~~~~~iK~~~~~~~~~-~~~~~~--------~E~~~l~~l~h~~i~~~ 68 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSK------LTGQLVALKEIRLEHEEG-APFTAI--------REASLLKDLKHANIVTL 68 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEc------CCCcEEEEEEEecccccC-CchhHH--------HHHHHHhhCCCcceeeE
Confidence 578999999999999999999964 467889999987543221 112222 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
++++.+++..|+||||++++|.+++... ...+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~--~~kl~ 145 (291)
T cd07844 69 HDIIHTKKTLTLVFEYLDTDLKQYMDDC-GGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERG--ELKLA 145 (291)
T ss_pred EEEEecCCeEEEEEecCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCC--CEEEC
Confidence 9999999999999999999999998743 34689999999999999999999999999999999999999999 89999
Q ss_pred ecCCcc
Q 000316 321 DKPLVG 326 (1678)
Q Consensus 321 DFGlA~ 326 (1678)
|||+++
T Consensus 146 dfg~~~ 151 (291)
T cd07844 146 DFGLAR 151 (291)
T ss_pred cccccc
Confidence 999986
No 150
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=99.96 E-value=2.3e-29 Score=284.98 Aligned_cols=276 Identities=18% Similarity=0.307 Sum_probs=229.2
Q ss_pred eEeecCCCCCCCCCeEEEEeCCCCEEEEeCCC-ceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCe
Q 000316 1286 FWFPTPAASWDGPDFLGRVGGLKDESPWKIKA-SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN 1364 (1678)
Q Consensus 1286 V~~fSpdg~~~~~~~LasgS~D~~v~lWd~~~-~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~ 1364 (1678)
+-.+.|+|+. |++||..|...||+... ..-..+.+|.++|+++.|+++|..++||+. ||.|++|+..-..
T Consensus 101 ~v~WtPeGRR-----Lltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~----gG~iKyWqpnmnn 171 (464)
T KOG0284|consen 101 VVRWTPEGRR-----LLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDK----GGMIKYWQPNMNN 171 (464)
T ss_pred eEEEcCCCce-----eEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCC----CceEEecccchhh
Confidence 3358899997 99999999999999752 233456789999999999999999999997 8999999987544
Q ss_pred EEEEEec-CCccEEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCC
Q 000316 1365 CVSGYYG-HEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNT 1441 (1678)
Q Consensus 1365 ~l~~l~g-H~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~ 1441 (1678)
++.+++ |...|.+++|+|++..+ +|.||+|+|||....+....+.+|.-
T Consensus 172 -Vk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgw--------------------------- 223 (464)
T KOG0284|consen 172 -VKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGW--------------------------- 223 (464)
T ss_pred -hHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCC---------------------------
Confidence 334444 55999999999998888 45599999999998877777765531
Q ss_pred CCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCccc
Q 000316 1442 LSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAV 1521 (1678)
Q Consensus 1442 ~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~ 1521 (1678)
.++|++|+|.-..+++|+.|+.|++||.++|+++.++.+| ...|..+.|.
T Consensus 224 -------------dVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~H------KntVl~~~f~----------- 273 (464)
T KOG0284|consen 224 -------------DVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGH------KNTVLAVKFN----------- 273 (464)
T ss_pred -------------CcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhc------cceEEEEEEc-----------
Confidence 1566777777889999999999999999999999998865 4457777775
Q ss_pred CCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cC-CCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCC
Q 000316 1522 ASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-AP-EDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNG 1599 (1678)
Q Consensus 1522 p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-sp-dg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~ 1599 (1678)
+++++|+++|.|..++++|+|+.+.+.++++|+..|++++ +| +..+|.||+.||.|..|.+....+ ....-.+|...
T Consensus 274 ~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p-~~~i~~AHd~~ 352 (464)
T KOG0284|consen 274 PNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEP-LGEIPPAHDGE 352 (464)
T ss_pred CCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCceEEEecccccc-ccCCCcccccc
Confidence 5668999999999999999999999999999999999999 65 556999999999999999985422 22234678999
Q ss_pred EEE--EEecCCEEEEEeCCC-eEEEecCCCCCC
Q 000316 1600 ISG--FSVWGQDVISISNNK-IGLSSLSKSADE 1629 (1678)
Q Consensus 1600 V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~ 1629 (1678)
|++ +.|-|..|++|+.|+ +++|.-.+.++.
T Consensus 353 iwsl~~hPlGhil~tgsnd~t~rfw~r~rp~d~ 385 (464)
T KOG0284|consen 353 IWSLAYHPLGHILATGSNDRTVRFWTRNRPGDK 385 (464)
T ss_pred eeeeeccccceeEeecCCCcceeeeccCCCCCc
Confidence 995 888899999999999 999997766543
No 151
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.96 E-value=1.7e-28 Score=290.29 Aligned_cols=150 Identities=15% Similarity=0.099 Sum_probs=129.0
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
.|+..+.||+|+||+||+|.+. .+++.+|+|.+.............. .+|+.+|+.++|+||+++++
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~-------~~E~~il~~l~~~~i~~~~~ 67 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVR------ATGKMYACKRLEKKRIKKRKGESMA-------LNEKQILEKVNSQFVVNLAY 67 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEC------CCCcEEEEEEeehhhhhhhhHHHHH-------HHHHHHHHHcCCcCceeEEE
Confidence 3788899999999999999964 4688999999876433322222222 28999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++..++..++||||+++ +|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 68 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~--~~kl~D 145 (285)
T cd05632 68 AYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYG--HIRISD 145 (285)
T ss_pred EEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCC--CEEEec
Confidence 99999999999999995 899888754455689999999999999999999999999999999999999998 899999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+++.
T Consensus 146 fg~~~~ 151 (285)
T cd05632 146 LGLAVK 151 (285)
T ss_pred CCccee
Confidence 999864
No 152
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.96 E-value=1.6e-28 Score=297.45 Aligned_cols=148 Identities=22% Similarity=0.363 Sum_probs=126.9
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++.+.||+|+||.||+|.+. .++..||+|.+.... .......+. +|+.+++.++||||++
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~------~~~~~vaiK~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~niv~ 67 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHK------PTGVKVAIKKISPFE-HQTFCQRTL--------REIKILRRFKHENIIG 67 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEc------CCCCeEEEEEecccc-cchhHHHHH--------HHHHHHHhCCCCCcCc
Confidence 3578999999999999999999964 567899999986421 112222333 8999999999999999
Q ss_pred eeeEEEeCC-----eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 240 VLGLLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 240 l~~~~~~~~-----~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
+++++.... ..|+||||++++|.+++. ...+++..++.++.|++.||.|||++||+||||||+|||++.++
T Consensus 68 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~- 143 (336)
T cd07849 68 ILDIIRPPSFESFNDVYIVQELMETDLYKLIK---TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNC- 143 (336)
T ss_pred hhheeecccccccceEEEEehhcccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCC-
Confidence 999876543 589999999999998886 45689999999999999999999999999999999999999999
Q ss_pred eeEEEEecCCccc
Q 000316 315 SWLYICDKPLVGF 327 (1678)
Q Consensus 315 ~~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 144 -~~kl~dfg~~~~ 155 (336)
T cd07849 144 -DLKICDFGLARI 155 (336)
T ss_pred -CEEECcccceee
Confidence 899999999874
No 153
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.96 E-value=5.7e-27 Score=270.00 Aligned_cols=282 Identities=23% Similarity=0.411 Sum_probs=234.4
Q ss_pred eEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEE
Q 000316 1320 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHV 1397 (1678)
Q Consensus 1320 l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrI 1397 (1678)
++++++|.+.|.+++|+|+++++++|+. ||.|++||+.+++....+.+|...+.++.|++++..+ ++.||.|++
T Consensus 2 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~----~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i 77 (289)
T cd00200 2 RRTLKGHTGGVTCVAFSPDGKLLATGSG----DGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRL 77 (289)
T ss_pred chHhcccCCCEEEEEEcCCCCEEEEeec----CcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEE
Confidence 4567899999999999999999999997 8999999999998888899999999999999988777 444999999
Q ss_pred EECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcE
Q 000316 1398 WNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSL 1477 (1678)
Q Consensus 1398 WD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtV 1477 (1678)
||+.+++.+..+..+. ..+.++.+++++..+++++.|+.|
T Consensus 78 ~~~~~~~~~~~~~~~~----------------------------------------~~i~~~~~~~~~~~~~~~~~~~~i 117 (289)
T cd00200 78 WDLETGECVRTLTGHT----------------------------------------SYVSSVAFSPDGRILSSSSRDKTI 117 (289)
T ss_pred EEcCcccceEEEeccC----------------------------------------CcEEEEEEcCCCCEEEEecCCCeE
Confidence 9999876665554321 125666667778888888889999
Q ss_pred EEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCe
Q 000316 1478 RFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYV 1557 (1678)
Q Consensus 1478 rlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V 1557 (1678)
++||+++++....+..+ ...+.++++++ ++.++++++.||.|++||+++++.+..+..|...|
T Consensus 118 ~~~~~~~~~~~~~~~~~------~~~i~~~~~~~-----------~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i 180 (289)
T cd00200 118 KVWDVETGKCLTTLRGH------TDWVNSVAFSP-----------DGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEV 180 (289)
T ss_pred EEEECCCcEEEEEeccC------CCcEEEEEEcC-----------cCCEEEEEcCCCcEEEEEccccccceeEecCcccc
Confidence 99999988888877743 44578888763 34688888889999999999999999999999999
Q ss_pred EEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEE--EEecCCEEEEEeCCC-eEEEecCCCCCCCCcc
Q 000316 1558 TKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQH 1633 (1678)
Q Consensus 1558 ~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~ 1633 (1678)
.++. +++++.+++++.|+.|++||++++ .....+.+|...+.+ +++++.++++++.|+ |++|++.. +..
T Consensus 181 ~~~~~~~~~~~l~~~~~~~~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~-----~~~ 253 (289)
T cd00200 181 NSVAFSPDGEKLLSSSSDGTIKLWDLSTG--KCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRT-----GEC 253 (289)
T ss_pred ceEEECCCcCEEEEecCCCcEEEEECCCC--ceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCC-----cee
Confidence 9999 899989999999999999999886 455567788888884 888888888888677 99999752 111
Q ss_pred eeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1634 RLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1634 ~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
..... .|...|.+++|+|+++.|++++.||.|++|+
T Consensus 254 -------~~~~~--~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 254 -------VQTLS--GHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred -------EEEcc--ccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 11111 3677899999999999999999999999996
No 154
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.96 E-value=4.4e-28 Score=281.10 Aligned_cols=149 Identities=24% Similarity=0.223 Sum_probs=128.2
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
.|++++.||+|+||.||++.+. .+++.+|+|.+............+. +|+++++.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHR------TDGKQYVIKKLNLRNASRRERKAAE--------QEAQLLSQLKHPNIVAYRE 66 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEc------CCCcEEEEEEEehhhcCHHHHHHHH--------HHHHHHHhCCCCCeeeeee
Confidence 4899999999999999999965 4567899999875433333333333 8999999999999999999
Q ss_pred EEEeC-CeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 243 LLKTS-GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 243 ~~~~~-~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
.+... ..+|+||||+++ +|.+++.......+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~--~~~l~ 144 (257)
T cd08223 67 SWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTN--IIKVG 144 (257)
T ss_pred eecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCC--cEEEe
Confidence 88754 468999999985 999999854556689999999999999999999999999999999999999998 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||+++.
T Consensus 145 df~~~~~ 151 (257)
T cd08223 145 DLGIARV 151 (257)
T ss_pred cccceEE
Confidence 9999874
No 155
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.96 E-value=1.4e-29 Score=280.08 Aligned_cols=274 Identities=16% Similarity=0.255 Sum_probs=223.0
Q ss_pred ccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEEEECCCC
Q 000316 1326 HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTG 1403 (1678)
Q Consensus 1326 H~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg 1403 (1678)
-..+|.|+.+.. ..++||.. |+||+|||..+..|+..+.||++.|.|+.|. ...+ +|.|.||++||+++|
T Consensus 196 ~skgVYClQYDD--~kiVSGlr----DnTikiWD~n~~~c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tg 267 (499)
T KOG0281|consen 196 NSKGVYCLQYDD--EKIVSGLR----DNTIKIWDKNSLECLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTG 267 (499)
T ss_pred cCCceEEEEecc--hhhhcccc----cCceEEeccccHHHHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCC
Confidence 456899998854 47999998 9999999999999999999999999999983 3444 566999999999999
Q ss_pred ceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECC
Q 000316 1404 KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDIN 1483 (1678)
Q Consensus 1404 ~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~ 1483 (1678)
+++.++-.|. ..|.-+.|+ +++++++|.|.++.+||+.
T Consensus 268 e~l~tlihHc------------------------------eaVLhlrf~------------ng~mvtcSkDrsiaVWdm~ 305 (499)
T KOG0281|consen 268 EPLNTLIHHC------------------------------EAVLHLRFS------------NGYMVTCSKDRSIAVWDMA 305 (499)
T ss_pred chhhHHhhhc------------------------------ceeEEEEEe------------CCEEEEecCCceeEEEecc
Confidence 9998887653 334555555 4599999999999999998
Q ss_pred CCee---eEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEE
Q 000316 1484 QGQK---LHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKL 1560 (1678)
Q Consensus 1484 tg~~---l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sv 1560 (1678)
.... .+.+. ||...|+.|.|+ ..+++++|.|.+|++|++.|++.++++.||...|-|+
T Consensus 306 sps~it~rrVLv------GHrAaVNvVdfd-------------~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIACl 366 (499)
T KOG0281|consen 306 SPTDITLRRVLV------GHRAAVNVVDFD-------------DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL 366 (499)
T ss_pred CchHHHHHHHHh------hhhhheeeeccc-------------cceEEEecCCceEEEEeccceeeehhhhcccccceeh
Confidence 6542 23344 455567777763 3699999999999999999999999999999998777
Q ss_pred EcCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEEEEecCCEEEEEeCCC-eEEEecCCCCCCCCcceeccce
Q 000316 1561 AAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQK 1639 (1678)
Q Consensus 1561 aspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~k 1639 (1678)
. -.|++++|||.|.+|++||+..| .++..+.||.+-|.++..|.+.++||+.|| |+|||+....+. +.....
T Consensus 367 Q-Yr~rlvVSGSSDntIRlwdi~~G--~cLRvLeGHEeLvRciRFd~krIVSGaYDGkikvWdl~aaldp----ra~~~~ 439 (499)
T KOG0281|consen 367 Q-YRDRLVVSGSSDNTIRLWDIECG--ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDP----RAPAST 439 (499)
T ss_pred h-ccCeEEEecCCCceEEEEecccc--HHHHHHhchHHhhhheeecCceeeeccccceEEEEecccccCC----cccccc
Confidence 5 36789999999999999999999 778899999999999999999999999999 999999743221 111111
Q ss_pred eeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1640 LYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1640 l~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
+ -......|.+.|..+.| |...+++++.|.+|-|||
T Consensus 440 ~-Cl~~lv~hsgRVFrLQF--D~fqIvsssHddtILiWd 475 (499)
T KOG0281|consen 440 L-CLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 475 (499)
T ss_pred h-HHHhhhhccceeEEEee--cceEEEeccCCCeEEEEE
Confidence 1 11111257788999988 678899999999999996
No 156
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.96 E-value=1.4e-28 Score=291.53 Aligned_cols=151 Identities=25% Similarity=0.233 Sum_probs=130.3
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++.+.||+|+||.||+|.+. .++..+|+|.++...........+. +|+.+++.++||||++
T Consensus 3 ~~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~ni~~ 68 (293)
T cd07843 3 SVDEYEKLNRIEEGTYGVVYRARDK------KTGEIVALKKLKMEKEKEGFPITSL--------REINILLKLQHPNIVT 68 (293)
T ss_pred chhhhhhhhhhcCCCCeEEEEEEEC------CCCcEEEEEEEeeccccccchhhHH--------HHHHHHHhcCCCCEEE
Confidence 4568999999999999999999964 4678899999975433322222223 8999999999999999
Q ss_pred eeeEEEeC--CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 240 VLGLLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 240 l~~~~~~~--~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
+++++... ...|+||||++++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++ .+
T Consensus 69 ~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~--~~ 145 (293)
T cd07843 69 VKEVVVGSNLDKIYMVMEYVEHDLKSLMETM-KQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRG--IL 145 (293)
T ss_pred EEEEEEecCCCcEEEEehhcCcCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCC--cE
Confidence 99999887 899999999999999998743 34689999999999999999999999999999999999999999 89
Q ss_pred EEEecCCccc
Q 000316 318 YICDKPLVGF 327 (1678)
Q Consensus 318 KL~DFGlA~~ 327 (1678)
||+|||+++.
T Consensus 146 ~l~d~g~~~~ 155 (293)
T cd07843 146 KICDFGLARE 155 (293)
T ss_pred EEeecCceee
Confidence 9999998873
No 157
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.96 E-value=3.5e-28 Score=289.98 Aligned_cols=156 Identities=19% Similarity=0.202 Sum_probs=131.4
Q ss_pred ccccccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCC
Q 000316 155 FSCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH 234 (1678)
Q Consensus 155 ~~~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~H 234 (1678)
+......++|++.++||+|+||.||+|.+. .++..||+|.+.............. +|+.+++.++|
T Consensus 5 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~aik~~~~~~~~~~~~~~~~--------~e~~~l~~l~h 70 (310)
T cd07865 5 FPFCDEVSKYEKLAKIGQGTFGEVFKARHK------KTKQIVALKKVLMENEKEGFPITAL--------REIKILQLLKH 70 (310)
T ss_pred CcccchhhheEEEEEeecCCCEEEEEEEEC------CCCcEEEEEEEeccCCcCCchhHHH--------HHHHHHHhCCC
Confidence 345556789999999999999999999964 4688999999865432222122222 89999999999
Q ss_pred CcccceeeEEEeCC--------eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCC
Q 000316 235 PNVAPVLGLLKTSG--------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSN 306 (1678)
Q Consensus 235 pNIV~l~~~~~~~~--------~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~N 306 (1678)
|||+++++++.... ..++||||++++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|
T Consensus 71 ~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~n 149 (310)
T cd07865 71 ENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSN-KNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAAN 149 (310)
T ss_pred CCccceEEEEecccccccCCCceEEEEEcCCCcCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHH
Confidence 99999999987654 4599999999999998873 33468999999999999999999999999999999999
Q ss_pred eEecCCCceeEEEEecCCccc
Q 000316 307 VLLTDSCWSWLYICDKPLVGF 327 (1678)
Q Consensus 307 ILl~~~g~~~lKL~DFGlA~~ 327 (1678)
|+++.++ .+||+|||+++.
T Consensus 150 il~~~~~--~~kl~dfg~~~~ 168 (310)
T cd07865 150 ILITKDG--ILKLADFGLARA 168 (310)
T ss_pred EEECCCC--cEEECcCCCccc
Confidence 9999999 899999999974
No 158
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.96 E-value=2.8e-28 Score=287.41 Aligned_cols=148 Identities=20% Similarity=0.286 Sum_probs=126.5
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++.+.||+|+||.||+|+++ .++..+|+|.+..........+.+. +|+.+++.++||||++++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~~~ 66 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNR------ETGQIVAIKKFVESEDDPVIKKIAL--------REIRMLKQLKHPNLVNLI 66 (286)
T ss_pred CceeeeeeecccCCeEEEEEEEC------CCCcEEEEEEEeecccCccccHHHH--------HHHHHHHhCCCCCEeeee
Confidence 47999999999999999999964 4678999999865432222222233 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++..+...++||||+++ .|..++. ....+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||+
T Consensus 67 ~~~~~~~~~~~v~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~--~~~l~ 142 (286)
T cd07847 67 EVFRRKRKLHLVFEYCDHTVLNELEK--NPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQG--QIKLC 142 (286)
T ss_pred eEEeeCCEEEEEEeccCccHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCC--cEEEC
Confidence 999999999999999997 5555554 344689999999999999999999999999999999999999999 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||++..
T Consensus 143 dfg~~~~ 149 (286)
T cd07847 143 DFGFARI 149 (286)
T ss_pred cccccee
Confidence 9999874
No 159
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.96 E-value=2.4e-28 Score=292.45 Aligned_cols=152 Identities=19% Similarity=0.182 Sum_probs=127.6
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.++||+|+||.||+|.+.. ...+..||+|.+...........+.. .+|+.+++.++||||+++++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~----~~~~~~~alK~~~~~~~~~~~~~~~~-------~~e~~~l~~l~h~~i~~~~~ 69 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKN----GKDGKEYAIKKFKGDKEQYTGISQSA-------CREIALLRELKHENVVSLVE 69 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecC----CCCCCeEEEEEeccccccccCccHHH-------HHHHHHHHhcCCCCccceEE
Confidence 58999999999999999999641 02678999999986432211111111 28999999999999999999
Q ss_pred EEEeC--CeEEEeccCCCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecC----CC
Q 000316 243 LLKTS--GLITSVIPKTPYTLENILQFSP---NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD----SC 313 (1678)
Q Consensus 243 ~~~~~--~~~~lVmEy~~g~L~~~l~~~~---~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~----~g 313 (1678)
++.+. ..+++||||++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++. ++
T Consensus 70 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~ 149 (316)
T cd07842 70 VFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERG 149 (316)
T ss_pred EEeCCCCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccc
Confidence 99988 7899999999999988886422 236899999999999999999999999999999999999999 77
Q ss_pred ceeEEEEecCCccc
Q 000316 314 WSWLYICDKPLVGF 327 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 150 --~~kl~Dfg~~~~ 161 (316)
T cd07842 150 --VVKIGDLGLARL 161 (316)
T ss_pred --eEEECCCccccc
Confidence 899999999874
No 160
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.96 E-value=2.8e-29 Score=301.58 Aligned_cols=213 Identities=18% Similarity=0.189 Sum_probs=175.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceE-EEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVL-GSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~-vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..+....+.||+|+||+||++.. .|.. ||+|++...........+|. +|+.+|.+++|||||+
T Consensus 40 ~~~l~~~~~iG~G~~g~V~~~~~--------~g~~~vavK~~~~~~~~~~~~~~f~--------~E~~il~~l~HpNIV~ 103 (362)
T KOG0192|consen 40 PDELPIEEVLGSGSFGTVYKGKW--------RGTDVVAVKIISDPDFDDESRKAFR--------REASLLSRLRHPNIVQ 103 (362)
T ss_pred hHHhhhhhhcccCCceeEEEEEe--------CCceeEEEEEecchhcChHHHHHHH--------HHHHHHHhCCCCCeee
Confidence 34556677799999999999884 4555 99999987655555444555 9999999999999999
Q ss_pred eeeEEEeCC-eEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ceecCCCCCCeEecCCCcee
Q 000316 240 VLGLLKTSG-LITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLG-IAHRSVCPSNVLLTDSCWSW 316 (1678)
Q Consensus 240 l~~~~~~~~-~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~g-IiHRDLKP~NILl~~~g~~~ 316 (1678)
++|++.... .++|||||++ |+|.+++.......++...+..++.||++||.|||+++ ||||||||+|||++.++ .+
T Consensus 104 f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~-~~ 182 (362)
T KOG0192|consen 104 FYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKG-KT 182 (362)
T ss_pred EEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCC-CE
Confidence 999999887 7999999999 69999998544678999999999999999999999999 99999999999999985 38
Q ss_pred EEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc--cccccccccccccCccchhhhHhhhccccCC-
Q 000316 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ--SMDWHSQFNRWWRGELSNFEYLLFLNKLAGR- 393 (1678)
Q Consensus 317 lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~--~~~y~~~~d~W~~G~isnfeyL~~ln~~aGR- 393 (1678)
+||||||+++...... . ..+...||+.|||||++. ...|+.++|+|++| +.....++|+
T Consensus 183 ~KI~DFGlsr~~~~~~------~-----~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFg-------IvlWEl~t~~~ 244 (362)
T KOG0192|consen 183 LKIADFGLSREKVISK------T-----SMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFG-------IVLWELLTGEI 244 (362)
T ss_pred EEECCCccceeecccc------c-----cccCCCCCccccChhhhcCCCCcCCccchhhhHH-------HHHHHHHHCCC
Confidence 9999999998644211 0 112246899999999999 67999999999999 6667777775
Q ss_pred CCCCCcCCcccceEe
Q 000316 394 RWGDYTFHMVMPWVI 408 (1678)
Q Consensus 394 s~~dl~q~pv~pwv~ 408 (1678)
+|.++....+.-.|.
T Consensus 245 Pf~~~~~~~~~~~v~ 259 (362)
T KOG0192|consen 245 PFEDLAPVQVASAVV 259 (362)
T ss_pred CCCCCCHHHHHHHHH
Confidence 677766655555554
No 161
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.96 E-value=5.4e-29 Score=304.98 Aligned_cols=211 Identities=15% Similarity=0.168 Sum_probs=165.5
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++++.||+|+||+||+|+++ .++..||+|++.+...........++ +|+.++..++||||++++
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~E~~il~~~~~~~iv~~~ 67 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKK------DTGHVYAMKILRKADMLEKEQVGHIR-------AERDILVEADSLWVVKMF 67 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEEC------CCCCEEEEEEEEHHHHHHhhHHHHHH-------HHHHHHHhCCCCCcceEE
Confidence 47999999999999999999965 46789999999764332222223332 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+.+.+...+|+|||||+| +|.+++. ..+.+++..++.++.|++.||+|||++||+||||||+|||++.++ ++||+
T Consensus 68 ~~~~~~~~~~lv~E~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~--~vkL~ 143 (363)
T cd05628 68 YSFQDKLNLYLIMEFLPGGDMMTLLM--KKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKG--HVKLS 143 (363)
T ss_pred EEEecCCeEEEEEcCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCC--CEEEe
Confidence 999999999999999985 9999998 456789999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccc--------cC--------C---C-----CcceeecccccCcccccccccccccccccccccccC
Q 000316 321 DKPLVGFNSIADWCTI--------PT--------S---P-----MIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 376 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~--------~~--------~---~-----~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G 376 (1678)
|||+++.......... .. . . ..........||+.|+|||++.+..|+.++|+|+.|
T Consensus 144 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlG 223 (363)
T cd05628 144 DFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLG 223 (363)
T ss_pred eccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhH
Confidence 9999985432110000 00 0 0 000001123589999999999999999999999999
Q ss_pred ccchhhhHhhhccc
Q 000316 377 ELSNFEYLLFLNKL 390 (1678)
Q Consensus 377 ~isnfeyL~~ln~~ 390 (1678)
++. |++++...++
T Consensus 224 vil-~ell~G~~Pf 236 (363)
T cd05628 224 VIM-YEMLIGYPPF 236 (363)
T ss_pred HHH-HHHHhCCCCC
Confidence 664 4444433333
No 162
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.96 E-value=1.7e-28 Score=292.87 Aligned_cols=151 Identities=21% Similarity=0.269 Sum_probs=128.1
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++.++||+|+||.||+|.++ .++..+|+|.+............. .+|+++++.++||||++
T Consensus 6 ~~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~--------~~e~~~l~~l~h~~i~~ 71 (311)
T cd07866 6 KLRDYEILGKLGEGTFGEVYKARQI------KTGRVVALKKILMHNEKDGFPITA--------LREIKILKKLKHPNVVP 71 (311)
T ss_pred ccccEEEEEEeccCCCEEEEEEEEC------CCCcEEEEEEEEeccCCCCcchhH--------HHHHHHHHhcCCCCccc
Confidence 3789999999999999999999964 467889999986543222211222 28999999999999999
Q ss_pred eeeEEEeCC--------eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecC
Q 000316 240 VLGLLKTSG--------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1678)
Q Consensus 240 l~~~~~~~~--------~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~ 311 (1678)
+++++.... .+++||||++++|...+.. ....+++..++.++.||++||.|||++||+||||||+||++++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~lv~~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~ 150 (311)
T cd07866 72 LIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDN 150 (311)
T ss_pred hhhheecccccccccCceEEEEEecCCcCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC
Confidence 999875433 5799999999999888873 3456899999999999999999999999999999999999999
Q ss_pred CCceeEEEEecCCccc
Q 000316 312 SCWSWLYICDKPLVGF 327 (1678)
Q Consensus 312 ~g~~~lKL~DFGlA~~ 327 (1678)
++ .+||+|||+++.
T Consensus 151 ~~--~~~l~dfg~~~~ 164 (311)
T cd07866 151 QG--ILKIADFGLARP 164 (311)
T ss_pred CC--CEEECcCccchh
Confidence 99 899999999974
No 163
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=1.2e-27 Score=254.08 Aligned_cols=275 Identities=26% Similarity=0.359 Sum_probs=228.0
Q ss_pred CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcEEeC--CCc
Q 000316 1317 ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGT 1394 (1678)
Q Consensus 1317 ~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~laS~--Dgt 1394 (1678)
...++.+.+|.++|+.+.|+-||++.++||. |++||+|+...|.+++++.||...|.+++.+.++..++|| |+.
T Consensus 7 tkr~~~l~~~qgaV~avryN~dGnY~ltcGs----drtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~ 82 (307)
T KOG0316|consen 7 TKRLSILDCAQGAVRAVRYNVDGNYCLTCGS----DRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKA 82 (307)
T ss_pred chhceeecccccceEEEEEccCCCEEEEcCC----CceEEeecccccceeeeecCCCceeeeccccccccccccCCCCce
Confidence 4467889999999999999999999999998 9999999999999999999999999999999999999777 999
Q ss_pred EEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECC
Q 000316 1395 LHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGN 1474 (1678)
Q Consensus 1395 VrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~D 1474 (1678)
|.+||++||+.++.|.+|. +.|+.+.| +.+...+++|+-|
T Consensus 83 v~vwDV~TGkv~Rr~rgH~------------------------------aqVNtV~f----------NeesSVv~SgsfD 122 (307)
T KOG0316|consen 83 VQVWDVNTGKVDRRFRGHL------------------------------AQVNTVRF----------NEESSVVASGSFD 122 (307)
T ss_pred EEEEEcccCeeeeeccccc------------------------------ceeeEEEe----------cCcceEEEecccc
Confidence 9999999999999888763 33444444 4558899999999
Q ss_pred CcEEEEECCCC--eeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEec
Q 000316 1475 GSLRFIDINQG--QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA 1552 (1678)
Q Consensus 1475 gtVrlWDl~tg--~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~g 1552 (1678)
.++++||.++. ++++.+... ...|.+|... +..+++||.||++|.||+|.|+.....-+
T Consensus 123 ~s~r~wDCRS~s~ePiQildea------~D~V~Si~v~-------------~heIvaGS~DGtvRtydiR~G~l~sDy~g 183 (307)
T KOG0316|consen 123 SSVRLWDCRSRSFEPIQILDEA------KDGVSSIDVA-------------EHEIVAGSVDGTVRTYDIRKGTLSSDYFG 183 (307)
T ss_pred ceeEEEEcccCCCCccchhhhh------cCceeEEEec-------------ccEEEeeccCCcEEEEEeecceeehhhcC
Confidence 99999999875 566666543 3346666643 36799999999999999999998887775
Q ss_pred cCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE----EEEecCCEEEEEeCCC-eEEEecCCC
Q 000316 1553 HDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS----GFSVWGQDVISISNNK-IGLSSLSKS 1626 (1678)
Q Consensus 1553 H~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~----afSpdg~~LaSgs~D~-I~vwdl~~~ 1626 (1678)
| +|+++. +++++..+.++.|+++++-|-.++ +.+..++||...-. +++.....+++||.|| +.+||+...
T Consensus 184 ~--pit~vs~s~d~nc~La~~l~stlrLlDk~tG--klL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~ 259 (307)
T KOG0316|consen 184 H--PITSVSFSKDGNCSLASSLDSTLRLLDKETG--KLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDE 259 (307)
T ss_pred C--cceeEEecCCCCEEEEeeccceeeecccchh--HHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEEeccc
Confidence 4 799999 999999999999999999999999 67788999988655 4888889999999999 999998622
Q ss_pred CCCCCcceeccceeeeeecCCCccCc-EEEEEEecCCCEEEEEeCCC
Q 000316 1627 ADEDGQHRLVPQKLYMVDNGAKNLSV-LSSISILPFSRLFLVGTEDG 1672 (1678)
Q Consensus 1627 ~~~~g~~~~~~~kl~~~~~g~~h~~~-I~svafsPd~~lLatgs~DG 1672 (1678)
. . ..++. -+..+ |.+++++|....|.++..-+
T Consensus 260 ~-----~---~sk~~------~~~~v~v~dl~~hp~~~~f~~A~~~~ 292 (307)
T KOG0316|consen 260 T-----Q---ISKLS------VVSTVIVTDLSCHPTMDDFITATGHG 292 (307)
T ss_pred e-----e---eeeec------cCCceeEEeeecccCccceeEecCCc
Confidence 1 1 11111 13344 89999999988887776443
No 164
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.96 E-value=6.6e-29 Score=305.75 Aligned_cols=206 Identities=16% Similarity=0.186 Sum_probs=161.8
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|+++++||+|+||.||+|++. .++..||||++.+.........+.++ +|+++|+.++|||||+++
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~E~~il~~l~hp~iv~~~ 67 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKK------DTGKIYAMKTLLKSEMFKKDQLAHVK-------AERDVLAESDSPWVVSLY 67 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEEC------CCCCEEEEEEEEHHHHHHhHHHHHHH-------HHHHHHHhCCCCCcceEE
Confidence 47999999999999999999965 57889999998654322222222222 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
++|.+++.+|+||||++ |+|.+++. ....+++..++.++.|++.||+|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~E~~~gg~L~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~--~~kl~ 143 (377)
T cd05629 68 YSFQDAQYLYLIMEFLPGGDLMTMLI--KYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGG--HIKLS 143 (377)
T ss_pred EEEEcCCeeEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCC--CEEEe
Confidence 99999999999999998 59999997 456789999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcc------cc--cCCCC----------------------------cceeecccccCcccccccccccc
Q 000316 321 DKPLVGFNSIADWC------TI--PTSPM----------------------------IGCCIEGCSSQGLYADLKLSQSM 364 (1678)
Q Consensus 321 DFGlA~~~~~~~~~------~~--~~~~~----------------------------~~~~~~~~~gt~~Y~APE~~~~~ 364 (1678)
|||+++........ .. ..... .........||+.|+|||++.+.
T Consensus 144 DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 223 (377)
T cd05629 144 DFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQ 223 (377)
T ss_pred ecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccC
Confidence 99999732210000 00 00000 00000123589999999999999
Q ss_pred cccccccccccCccchhhhHh
Q 000316 365 DWHSQFNRWWRGELSNFEYLL 385 (1678)
Q Consensus 365 ~y~~~~d~W~~G~isnfeyL~ 385 (1678)
.|+.++|+|+.|++. |+.++
T Consensus 224 ~~~~~~DiwSlGvil-~ellt 243 (377)
T cd05629 224 GYGQECDWWSLGAIM-FECLI 243 (377)
T ss_pred CCCCceeeEecchhh-hhhhc
Confidence 999999999999765 44433
No 165
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.96 E-value=1e-28 Score=298.86 Aligned_cols=149 Identities=23% Similarity=0.339 Sum_probs=128.3
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.++ .++..||+|.+............+. +|+.+|+.++||||+++
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~------~~~~~valK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~iv~~ 69 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDT------RSGKKVAIKKIPHAFDVPTLAKRTL--------RELKILRHFKHDNIIAI 69 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEc------CCCCEEEEEEeccccccccchHHHH--------HHHHHHHhcCCCCccCH
Confidence 478999999999999999999965 5688999999875432222222333 89999999999999999
Q ss_pred eeEEEe----CCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCcee
Q 000316 241 LGLLKT----SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1678)
Q Consensus 241 ~~~~~~----~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~ 316 (1678)
+++|.. ...+|+||||+.++|.+++. ....+++..++.++.||+.||.|||++||+||||||+||+++.++ .
T Consensus 70 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~--~ 145 (334)
T cd07855 70 RDILRPPGADFKDVYVVMDLMESDLHHIIH--SDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDC--E 145 (334)
T ss_pred HHhccccCCCCceEEEEEehhhhhHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--c
Confidence 998864 34789999999999999987 455689999999999999999999999999999999999999999 8
Q ss_pred EEEEecCCccc
Q 000316 317 LYICDKPLVGF 327 (1678)
Q Consensus 317 lKL~DFGlA~~ 327 (1678)
+||+|||+++.
T Consensus 146 ~kl~dfg~~~~ 156 (334)
T cd07855 146 LRIGDFGMARG 156 (334)
T ss_pred EEeccccccee
Confidence 99999999874
No 166
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.96 E-value=2.2e-27 Score=297.79 Aligned_cols=281 Identities=23% Similarity=0.391 Sum_probs=239.0
Q ss_pred eEEeccc-cccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCe--EEEEEecCCccEEEEeecCCCCcEEe--CCCc
Q 000316 1320 LSSIRAH-HGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN--CVSGYYGHEEVVNDICVLSSSGRIAS--CDGT 1394 (1678)
Q Consensus 1320 l~tl~gH-~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~--~l~~l~gH~~~V~sV~fs~~~~~laS--~Dgt 1394 (1678)
...+.+| ..+|.++.|+++|+.+++++. |+++++|++.+++ ....+.+|...|++++|+|++..+++ .|++
T Consensus 151 ~~~~~~~~~~sv~~~~fs~~g~~l~~~~~----~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~t 226 (456)
T KOG0266|consen 151 EQTLAGHECPSVTCVDFSPDGRALAAASS----DGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKT 226 (456)
T ss_pred eeeecccccCceEEEEEcCCCCeEEEccC----CCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCce
Confidence 5556555 889999999999999999987 8999999998887 77788999999999999999998844 4999
Q ss_pred EEEEEC-CCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEEC
Q 000316 1395 LHVWNS-QTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIG 1473 (1678)
Q Consensus 1395 VrIWD~-~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~ 1473 (1678)
|||||+ ..+.+++++.+|.. .+++++|+|+|+.+++|+.
T Consensus 227 iriwd~~~~~~~~~~l~gH~~----------------------------------------~v~~~~f~p~g~~i~Sgs~ 266 (456)
T KOG0266|consen 227 LRIWDLKDDGRNLKTLKGHST----------------------------------------YVTSVAFSPDGNLLVSGSD 266 (456)
T ss_pred EEEeeccCCCeEEEEecCCCC----------------------------------------ceEEEEecCCCCEEEEecC
Confidence 999999 55688888887642 2567777778999999999
Q ss_pred CCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCc--EEEEEe
Q 000316 1474 NGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN--VIASWR 1551 (1678)
Q Consensus 1474 DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~--~i~~l~ 1551 (1678)
|++|++||+++++++..+.+|. ..|.+++|. ++|+.+++++.||.|++||+.++. ++..+.
T Consensus 267 D~tvriWd~~~~~~~~~l~~hs------~~is~~~f~-----------~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~ 329 (456)
T KOG0266|consen 267 DGTVRIWDVRTGECVRKLKGHS------DGISGLAFS-----------PDGNLLVSASYDGTIRVWDLETGSKLCLKLLS 329 (456)
T ss_pred CCcEEEEeccCCeEEEeeeccC------CceEEEEEC-----------CCCCEEEEcCCCccEEEEECCCCceeeeeccc
Confidence 9999999999999999999764 457888875 566899999999999999999999 678888
Q ss_pred ccCCC--eEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEE-----EEecCCEEEEEeCCC-eEEEe
Q 000316 1552 AHDGY--VTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG-----FSVWGQDVISISNNK-IGLSS 1622 (1678)
Q Consensus 1552 gH~~~--V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a-----fSpdg~~LaSgs~D~-I~vwd 1622 (1678)
++... ++++. +|++.++++++.|+++++||++.+ ..+..+.+|...+.+ .++.++++++|+.|+ |.+|+
T Consensus 330 ~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~ 407 (456)
T KOG0266|consen 330 GAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSG--KSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWD 407 (456)
T ss_pred CCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCC--cceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEe
Confidence 87766 88888 999999999999999999999988 667788999886543 467899999999999 99999
Q ss_pred cCCCCCCCCcceeccceeeeeecCCCc-cCcEEEEEEecCCCEEEEEe--CCCcEEEc
Q 000316 1623 LSKSADEDGQHRLVPQKLYMVDNGAKN-LSVLSSISILPFSRLFLVGT--EDGYLRLC 1677 (1678)
Q Consensus 1623 l~~~~~~~g~~~~~~~kl~~~~~g~~h-~~~I~svafsPd~~lLatgs--~DG~IrIw 1677 (1678)
++. +.. ... . .+| ...+..++++|...++++++ .|+.|++|
T Consensus 408 ~~s-----~~~---~~~----l--~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w 451 (456)
T KOG0266|consen 408 SSS-----GGI---LQR----L--EGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLW 451 (456)
T ss_pred CCc-----cch---hhh----h--cCCCCCceeccccCCCcCeeeecCcCCCceEEEe
Confidence 862 111 111 1 246 78899999999999999999 69999999
No 167
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.96 E-value=1.5e-26 Score=268.94 Aligned_cols=330 Identities=15% Similarity=0.195 Sum_probs=256.0
Q ss_pred cccccCCCCceE--eecCCCCCCCCCeEEEEeCCCCEEEEeCCCc---eeEEeccccccEEEEEEecCCCEEEEEecCCC
Q 000316 1276 TSNLMKCEPWFW--FPTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRSVAVGQDECTVFTAGIGPG 1350 (1678)
Q Consensus 1276 ~~~l~gH~~~V~--~fSpdg~~~~~~~LasgS~D~~v~lWd~~~~---~l~tl~gH~~~V~svafspdg~~LaSgS~d~~ 1350 (1678)
...+..|+..+. .+||.|.| +|+|...|+||+||..++ +..+++.-.++|..++|+.|+++|+..|. |
T Consensus 52 ~~iYtEH~~~vtVAkySPsG~y-----iASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGE--G 124 (603)
T KOG0318|consen 52 VDIYTEHAHQVTVAKYSPSGFY-----IASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGE--G 124 (603)
T ss_pred eeeeccccceeEEEEeCCCceE-----EeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEec--C
Confidence 445666776666 39999998 999999999999998752 44567778899999999999999999986 4
Q ss_pred CCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCc-E--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCcc
Q 000316 1351 FKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGR-I--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSIS 1427 (1678)
Q Consensus 1351 ~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~-l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~ 1427 (1678)
.++..+++-..+|..+..+.||...|++++|-|...+ + +|.|++|-+|+-.--+-..++..|+
T Consensus 125 rerfg~~F~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~Hs-------------- 190 (603)
T KOG0318|consen 125 RERFGHVFLWDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHS-------------- 190 (603)
T ss_pred ccceeEEEEecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccc--------------
Confidence 5555555555688889999999999999999776553 3 4559999999865444444444332
Q ss_pred ccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEE
Q 000316 1428 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAI 1507 (1678)
Q Consensus 1428 ~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sv 1507 (1678)
..|.|+.++|||..+++++.||+|.+||=.+|+.+..+.. ..+|.+.|.++
T Consensus 191 --------------------------kFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~---~~aHkGsIfal 241 (603)
T KOG0318|consen 191 --------------------------KFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELED---SDAHKGSIFAL 241 (603)
T ss_pred --------------------------cceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecC---CCCccccEEEE
Confidence 3478888899999999999999999999999999998875 23577889999
Q ss_pred EeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEE--------------------------------------
Q 000316 1508 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIAS-------------------------------------- 1549 (1678)
Q Consensus 1508 a~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~-------------------------------------- 1549 (1678)
+|+ ||+..++++|.|.+++|||+.+++++++
T Consensus 242 sWs-----------PDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~ 310 (603)
T KOG0318|consen 242 SWS-----------PDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDP 310 (603)
T ss_pred EEC-----------CCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCC
Confidence 886 6678999999999999999987554433
Q ss_pred -----EeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCC---------------------------------
Q 000316 1550 -----WRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQP--------------------------------- 1590 (1678)
Q Consensus 1550 -----l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~--------------------------------- 1590 (1678)
+.||...|++++ ++++++|.|||.||.|.-||..++....+
T Consensus 311 ~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~ 390 (603)
T KOG0318|consen 311 SVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVIS 390 (603)
T ss_pred ChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEe
Confidence 347888999999 99999999999999999999866431100
Q ss_pred --------------------------------------eEeecCCC----------CEEEEEecCCEEEEEeCCC-eEEE
Q 000316 1591 --------------------------------------TVFKGHTN----------GISGFSVWGQDVISISNNK-IGLS 1621 (1678)
Q Consensus 1591 --------------------------------------~~l~gH~~----------~V~afSpdg~~LaSgs~D~-I~vw 1621 (1678)
..++.++. ...+++|++..+|.|+.|+ |+||
T Consensus 391 ~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvy 470 (603)
T KOG0318|consen 391 LKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVY 470 (603)
T ss_pred cccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEE
Confidence 00111111 1114788999999999999 9999
Q ss_pred ecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1622 SLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1622 dl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
.++.... . ...++ ..|.++|++++++||+.+||+|...+.|-+||
T Consensus 471 sl~g~~l--~----ee~~~------~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd 515 (603)
T KOG0318|consen 471 SLSGDEL--K----EEAKL------LEHRAAITDVAYSPDGAYLAAGDASRKVVLYD 515 (603)
T ss_pred EecCCcc--c----ceeee------ecccCCceEEEECCCCcEEEEeccCCcEEEEE
Confidence 9863110 0 00011 25899999999999999999999999999986
No 168
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.96 E-value=8.6e-29 Score=305.29 Aligned_cols=212 Identities=14% Similarity=0.155 Sum_probs=165.0
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|+++++||+|+||.||+|++. .++..+|+|++.+.........+.+. +|+.+|+.++|||||++++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~-------~E~~il~~~~h~~iv~~~~ 68 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKV------DTKALYAMKTLRKKDVLLRNQVAHVK-------AERDILAEADNEWVVRLYY 68 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEEC------CCCCEEEEEEEeHHHhhhHHHHHHHH-------HHHHHHHhCCCCcCCeEEE
Confidence 5999999999999999999965 46889999998754322222222332 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
+|.+++.+|+|||||+| +|.+++. ..+.+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|
T Consensus 69 ~~~~~~~~~lv~E~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g--~~kL~D 144 (382)
T cd05625 69 SFQDKDNLYFVMDYIPGGDMMSLLI--RMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG--HIKLTD 144 (382)
T ss_pred EEEeCCEEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC--CEEEeE
Confidence 99999999999999985 9999997 345689999999999999999999999999999999999999999 899999
Q ss_pred cCCcccCCCCCccc--c----------------------------------cCCCCcceeecccccCccccccccccccc
Q 000316 322 KPLVGFNSIADWCT--I----------------------------------PTSPMIGCCIEGCSSQGLYADLKLSQSMD 365 (1678)
Q Consensus 322 FGlA~~~~~~~~~~--~----------------------------------~~~~~~~~~~~~~~gt~~Y~APE~~~~~~ 365 (1678)
||+|+......... . .......+......||+.|||||++.+..
T Consensus 145 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~ 224 (382)
T cd05625 145 FGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTG 224 (382)
T ss_pred CCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCC
Confidence 99986322100000 0 00000001112345899999999999999
Q ss_pred ccccccccccCccchhhhHhhhccccC
Q 000316 366 WHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1678)
Q Consensus 366 y~~~~d~W~~G~isnfeyL~~ln~~aG 392 (1678)
|+.++|+|+.|+|. |+.++...+|.+
T Consensus 225 ~~~~~DiwSlGvil-~elltG~~Pf~~ 250 (382)
T cd05625 225 YTQLCDWWSVGVIL-YEMLVGQPPFLA 250 (382)
T ss_pred CCCeeeEEechHHH-HHHHhCCCCCCC
Confidence 99999999999765 555444443333
No 169
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.96 E-value=3.8e-28 Score=287.96 Aligned_cols=149 Identities=20% Similarity=0.179 Sum_probs=126.2
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-CCcccce
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPV 240 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-HpNIV~l 240 (1678)
++|++.+.||+|+||.||+|.+. .++..||+|.+............+. +|+.+++.+. ||||+++
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~------~~~~~v~lK~~~~~~~~~~~~~~~~--------~E~~~l~~l~~~~~i~~~ 66 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDK------NTGKLVALKKTRLEMDEEGIPPTAL--------REISLLQMLSESIYIVRL 66 (295)
T ss_pred CCceEeeEecccCCeEEEEEEEC------CCCcEEEEEeehhhccccCCchHHH--------HHHHHHHHccCCCCccce
Confidence 46999999999999999999964 4678999999865432222222333 8999999995 6999999
Q ss_pred eeEEEeCCe-----EEEeccCCCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecC-
Q 000316 241 LGLLKTSGL-----ITSVIPKTPYTLENILQFSP---NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD- 311 (1678)
Q Consensus 241 ~~~~~~~~~-----~~lVmEy~~g~L~~~l~~~~---~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~- 311 (1678)
++++...+. .|+||||++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+||+++.
T Consensus 67 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~ 146 (295)
T cd07837 67 LDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQ 146 (295)
T ss_pred eeeEeecCCCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecC
Confidence 999987665 89999999999999887432 245899999999999999999999999999999999999998
Q ss_pred CCceeEEEEecCCcc
Q 000316 312 SCWSWLYICDKPLVG 326 (1678)
Q Consensus 312 ~g~~~lKL~DFGlA~ 326 (1678)
++ .+||+|||+++
T Consensus 147 ~~--~~kl~dfg~~~ 159 (295)
T cd07837 147 KG--LLKIADLGLGR 159 (295)
T ss_pred CC--eEEEeecccce
Confidence 67 89999999986
No 170
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=1.2e-29 Score=269.48 Aligned_cols=143 Identities=24% Similarity=0.337 Sum_probs=120.6
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-CCccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVA 238 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-HpNIV 238 (1678)
..++|++.+++|+|.|++||.|.+. .+...++||+++.-+ .++.. ||++||+.|. |||||
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~------~~~eK~ViKiLKPVk-----kkKIk--------REikIL~nL~gg~NIi 96 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINI------TNNEKCVIKILKPVK-----KKKIK--------REIKILQNLRGGPNII 96 (338)
T ss_pred ccchHHHHHHHcCccHhhHhccccc------CCCceEEEeeechHH-----HHHHH--------HHHHHHHhccCCCCee
Confidence 4789999999999999999999843 456777888876422 12222 9999999997 99999
Q ss_pred ceeeEEEeCC--eEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCce
Q 000316 239 PVLGLLKTSG--LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1678)
Q Consensus 239 ~l~~~~~~~~--~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~ 315 (1678)
+|+++..+.. ...+|+||+.. |...+.. .++..+++++++|+++||.|||++||+|||+||.|++|+... .
T Consensus 97 ~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~-----tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~-r 170 (338)
T KOG0668|consen 97 KLLDIVKDPESKTPSLIFEYVNNTDFKQLYP-----TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHEL-R 170 (338)
T ss_pred ehhhhhcCccccCchhHhhhhccccHHHHhh-----hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhh-c
Confidence 9999998765 57899999996 6555543 478899999999999999999999999999999999999876 3
Q ss_pred eEEEEecCCccc
Q 000316 316 WLYICDKPLVGF 327 (1678)
Q Consensus 316 ~lKL~DFGlA~~ 327 (1678)
.++|+|.|+|.+
T Consensus 171 kLrlIDWGLAEF 182 (338)
T KOG0668|consen 171 KLRLIDWGLAEF 182 (338)
T ss_pred eeeeeecchHhh
Confidence 899999999975
No 171
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.96 E-value=6.2e-28 Score=285.96 Aligned_cols=148 Identities=23% Similarity=0.283 Sum_probs=129.7
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHH-HHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~-~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
++|++.+.||+|+||.||++.+. .+++.+|+|.+.......... ..+. +|+++|+.++||||+++
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 66 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHK------GSGKYYALKILSKAKIVKLKQVEHVL--------NEKRILQSIRHPFLVNL 66 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEc------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhCCCCCccce
Confidence 46999999999999999999965 467899999987543322222 2233 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++..++.+|+||||++ ++|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~~v~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~--~~kl 142 (290)
T cd05580 67 YGSFQDDSNLYLVMEYVPGGELFSHLR--KSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDG--YIKI 142 (290)
T ss_pred eeEEEcCCeEEEEEecCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCC--CEEE
Confidence 999999999999999996 59999998 346789999999999999999999999999999999999999999 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||+++.
T Consensus 143 ~dfg~~~~ 150 (290)
T cd05580 143 TDFGFAKR 150 (290)
T ss_pred eeCCCccc
Confidence 99999874
No 172
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=1.5e-27 Score=288.86 Aligned_cols=320 Identities=17% Similarity=0.260 Sum_probs=251.1
Q ss_pred eecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEE
Q 000316 1288 FPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCV 1366 (1678)
Q Consensus 1288 ~fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l 1366 (1678)
+|.|...| +.++=..|.|++||.. +.++..|.+|.|+|+.|+|+|++..++|||+ |-+|+||+..+.+|+
T Consensus 16 sFHP~rPw-----ILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGD----DykIkVWnYk~rrcl 86 (1202)
T KOG0292|consen 16 SFHPKRPW-----ILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGD----DYKIKVWNYKTRRCL 86 (1202)
T ss_pred ecCCCCCE-----EEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCC----ccEEEEEecccceeh
Confidence 58898898 9999999999999999 9999999999999999999999999999997 899999999999999
Q ss_pred EEEecCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCC
Q 000316 1367 SGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSS 1444 (1678)
Q Consensus 1367 ~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~ 1444 (1678)
.++.||-+.|..+.|++.-..+ ||.|.|||||+..+++|+.++++|.
T Consensus 87 ftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHn------------------------------- 135 (1202)
T KOG0292|consen 87 FTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHN------------------------------- 135 (1202)
T ss_pred hhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCc-------------------------------
Confidence 9999999999999999999988 6669999999999999999999863
Q ss_pred CeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEE-----------------eeCCCCc------ccCC
Q 000316 1445 GILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHL-----------------WRGEPTE------LGFP 1501 (1678)
Q Consensus 1445 ~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~-----------------l~~~~~~------v~~~ 1501 (1678)
++|.|..|+|....++++|-|.|||+||+.--+.-+. +-+..+. -||.
T Consensus 136 ---------HYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHD 206 (1202)
T KOG0292|consen 136 ---------HYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHD 206 (1202)
T ss_pred ---------eEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccc
Confidence 3477777888899999999999999999853211000 1110000 1345
Q ss_pred CcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCc--EEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEE
Q 000316 1502 SLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN--VIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLR 1578 (1678)
Q Consensus 1502 ~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~--~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~ 1578 (1678)
.-|+-++|.|.. .++++|++|..|++|.....+ .+.+.+||.+.|.++- +|...+++|.|.|++|+
T Consensus 207 RGVNwaAfhpTl-----------pliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksir 275 (1202)
T KOG0292|consen 207 RGVNWAAFHPTL-----------PLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIR 275 (1202)
T ss_pred cccceEEecCCc-----------ceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccEE
Confidence 557777776533 489999999999999987544 5667789999999999 99989999999999999
Q ss_pred EEEcCCCCCCCCeEeecCCCCEE--EEEecCCEEEEEeCCCeEEEecCCCCCC-----CCcceeccceeee---------
Q 000316 1579 IWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNKIGLSSLSKSADE-----DGQHRLVPQKLYM--------- 1642 (1678)
Q Consensus 1579 IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~I~vwdl~~~~~~-----~g~~~~~~~kl~~--------- 1642 (1678)
|||+... ..+.+++...+.-+ +..|..+++|.|-+.|+.||.+++.-.. ++-..+....++.
T Consensus 276 VwDm~kR--t~v~tfrrendRFW~laahP~lNLfAAgHDsGm~VFkleRErpa~~v~~n~LfYvkd~~i~~~d~~t~~d~ 353 (1202)
T KOG0292|consen 276 VWDMTKR--TSVQTFRRENDRFWILAAHPELNLFAAGHDSGMIVFKLERERPAYAVNGNGLFYVKDRFIRSYDLRTQKDT 353 (1202)
T ss_pred EEecccc--cceeeeeccCCeEEEEEecCCcceeeeecCCceEEEEEcccCceEEEcCCEEEEEccceEEeeeccccccc
Confidence 9999876 66778876666544 6888899999998888888888743110 1111111111111
Q ss_pred ----eecCCCccCcEEEEEEecCCCEEEEEe
Q 000316 1643 ----VDNGAKNLSVLSSISILPFSRLFLVGT 1669 (1678)
Q Consensus 1643 ----~~~g~~h~~~I~svafsPd~~lLatgs 1669 (1678)
...+.....+..+++++|....+..|+
T Consensus 354 ~v~~lr~~g~~~~~~~smsYNpae~~vlics 384 (1202)
T KOG0292|consen 354 AVASLRRPGTLWQPPRSLSYNPAENAVLICS 384 (1202)
T ss_pred eeEeccCCCcccCCcceeeeccccCeEEEEe
Confidence 111111236788999999887766664
No 173
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.96 E-value=6.6e-28 Score=285.63 Aligned_cols=149 Identities=23% Similarity=0.271 Sum_probs=128.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.+. .++..+|+|.+...... .....+. +|+.+++.++|+||+++
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~-~~~~~~~--------~e~~~l~~l~h~ni~~~ 68 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISR------INGQLVALKVISMKTEE-GVPFTAI--------REASLLKGLKHANIVLL 68 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEc------CCCcEEEEEEecccCcC-CCcHHHH--------HHHHHHHhcCCCCEeEE
Confidence 467999999999999999999864 46788999998654221 1112233 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
++++.+++..|+||||++++|.+.+.. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~--~~~l~ 145 (291)
T cd07870 69 HDIIHTKETLTFVFEYMHTDLAQYMIQ-HPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLG--ELKLA 145 (291)
T ss_pred EEEEecCCeEEEEEecccCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCC--cEEEe
Confidence 999999999999999999988888763 334578888999999999999999999999999999999999998 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||+++.
T Consensus 146 Dfg~~~~ 152 (291)
T cd07870 146 DFGLARA 152 (291)
T ss_pred ccccccc
Confidence 9999873
No 174
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.96 E-value=4e-28 Score=287.93 Aligned_cols=151 Identities=19% Similarity=0.235 Sum_probs=129.0
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++.+.||+|++|.||+|.++ .+++.+|+|.+............+. +|+++++.++||||++++
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 67 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDR------VTNETIALKKIRLEQEDEGVPSTAI--------REISLLKEMQHGNIVRLQ 67 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEec------CCCcEEEEEehhhccccccchHHHH--------HHHHHHHhccCCCEeeEE
Confidence 57999999999999999999964 4678899999865433222223333 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 242 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
+++.++...|+||||++++|.+.+.......+++..++.++.||+.||+|||++||+||||||+||+++.++ ..+||+|
T Consensus 68 ~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~-~~~kl~d 146 (294)
T PLN00009 68 DVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRT-NALKLAD 146 (294)
T ss_pred EEEecCCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCC-CEEEEcc
Confidence 999999999999999999999988754444578889999999999999999999999999999999998644 1799999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+++.
T Consensus 147 fg~~~~ 152 (294)
T PLN00009 147 FGLARA 152 (294)
T ss_pred cccccc
Confidence 999974
No 175
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.96 E-value=8.9e-28 Score=278.13 Aligned_cols=149 Identities=19% Similarity=0.196 Sum_probs=132.0
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.+.||+|+||.||+|.+. .++..+++|.+............+. +|+++++.++||||+++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~ 66 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRK------ADKRVYAMKQIDLSKMNRREREEAI--------DEARVLAKLDSSYIIRYYE 66 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEc------CCCcEEEEEEeehhhCCHHHHHHHH--------HHHHHHHhcCCCCeehhee
Confidence 5889999999999999999964 4678999999876544444444554 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++.+++..|+||||++| +|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~--~~~l~d 144 (256)
T cd08529 67 SFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYD--NVKIGD 144 (256)
T ss_pred eeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCC--CEEEcc
Confidence 99999999999999985 999999865456789999999999999999999999999999999999999998 899999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+++.
T Consensus 145 f~~~~~ 150 (256)
T cd08529 145 LGVAKL 150 (256)
T ss_pred ccccee
Confidence 999874
No 176
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.96 E-value=2.8e-28 Score=295.51 Aligned_cols=150 Identities=27% Similarity=0.382 Sum_probs=128.9
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
...+|++.+.||+|+||.||+|++. .++..||||.+.............. +|+.+++.++||||++
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~ni~~ 68 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNS------ETNEKVAIKKIANAFDNRIDAKRTL--------REIKLLRHLDHENVIA 68 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEec------CCCCeEEEEEecccccccchhHHHH--------HHHHHHHhcCCCCccc
Confidence 3568999999999999999999964 5788999999875322222223333 8999999999999999
Q ss_pred eeeEEEeCC-----eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 240 VLGLLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 240 l~~~~~~~~-----~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
+++++.... .+|+||||++++|.+++. ....+++..++.++.|++.||.|||+++|+||||||+||+++.++
T Consensus 69 ~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~- 145 (337)
T cd07858 69 IKDIMPPPHREAFNDVYIVYELMDTDLHQIIR--SSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANC- 145 (337)
T ss_pred hHHheecccccccCcEEEEEeCCCCCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC-
Confidence 999887543 589999999999999987 456789999999999999999999999999999999999999998
Q ss_pred eeEEEEecCCccc
Q 000316 315 SWLYICDKPLVGF 327 (1678)
Q Consensus 315 ~~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 146 -~~kL~Dfg~~~~ 157 (337)
T cd07858 146 -DLKICDFGLART 157 (337)
T ss_pred -CEEECcCccccc
Confidence 899999999874
No 177
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.96 E-value=1.2e-26 Score=267.17 Aligned_cols=277 Identities=23% Similarity=0.408 Sum_probs=237.3
Q ss_pred cccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCe
Q 000316 1278 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGT 1354 (1678)
Q Consensus 1278 ~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~Dgt 1354 (1678)
++.+|.+.|.+ ++|++.+ +++++.|+.+++|++. +.....+.+|...+.++.|+++++.+++++. |+.
T Consensus 4 ~~~~h~~~i~~~~~~~~~~~-----l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----~~~ 74 (289)
T cd00200 4 TLKGHTGGVTCVAFSPDGKL-----LATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSS----DKT 74 (289)
T ss_pred HhcccCCCEEEEEEcCCCCE-----EEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcC----CCe
Confidence 45689999986 8888876 9999999999999998 5678889999999999999999999999997 899
Q ss_pred EEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE-EeC-CCcEEEEECCCCceeEEecccCccccccCCCCCCccccccc
Q 000316 1355 VQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASC-DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTD 1432 (1678)
Q Consensus 1355 VrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l-aS~-DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~ 1432 (1678)
|++||+.+++....+.+|...|.+++|++++..+ ++. |+.|++||+.+++....+..+.
T Consensus 75 i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~------------------- 135 (289)
T cd00200 75 IRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHT------------------- 135 (289)
T ss_pred EEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCC-------------------
Confidence 9999999988889999999999999999987776 334 9999999999887776665321
Q ss_pred cccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCC
Q 000316 1433 QVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGS 1512 (1678)
Q Consensus 1433 ~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~ 1512 (1678)
..++++++++++..+++++.|+.|++||+++++.+..+..+ ...+.++++.
T Consensus 136 ---------------------~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~------~~~i~~~~~~-- 186 (289)
T cd00200 136 ---------------------DWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGH------TGEVNSVAFS-- 186 (289)
T ss_pred ---------------------CcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEecC------ccccceEEEC--
Confidence 12566667777888888888999999999998888887743 3357778775
Q ss_pred CccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCe
Q 000316 1513 EKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPT 1591 (1678)
Q Consensus 1513 ~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~ 1591 (1678)
++++.+++++.||.|++||+++++.+..+..|...+.++. ++++.++++++.||.|++||+.++ ....
T Consensus 187 ---------~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~--~~~~ 255 (289)
T cd00200 187 ---------PDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTG--ECVQ 255 (289)
T ss_pred ---------CCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCc--eeEE
Confidence 4556889999999999999999999999988999999999 888889999888999999999886 5566
Q ss_pred EeecCCCCEEE--EEecCCEEEEEeCCC-eEEEe
Q 000316 1592 VFKGHTNGISG--FSVWGQDVISISNNK-IGLSS 1622 (1678)
Q Consensus 1592 ~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwd 1622 (1678)
.+.+|...|.+ |+++++.+++++.|+ |++|+
T Consensus 256 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 256 TLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred EccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 77889888884 888889999999999 99996
No 178
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.96 E-value=7.6e-28 Score=285.38 Aligned_cols=148 Identities=22% Similarity=0.259 Sum_probs=128.9
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.+.|+++++||.|+||.||+|++. .++..+++|.+... .......+. +|+.+++.++||||+++
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~------~~~~~~~~k~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 74 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNK------ETGALAAAKVIETK--SEEELEDYM--------VEIEILATCNHPYIVKL 74 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEEC------CCCceEEEEEeccC--CHHHHHHHH--------HHHHHHHhCCCCcEeee
Confidence 467999999999999999999964 46789999998653 233334444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++.+..+..+|+||||++| +|..++.. ....+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 75 ~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~kl 151 (292)
T cd06644 75 LGAFYWDGKLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDG--DIKL 151 (292)
T ss_pred EEEEEeCCeEEEEEecCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCC--CEEE
Confidence 9999999999999999996 88777763 345689999999999999999999999999999999999999988 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||++..
T Consensus 152 ~dfg~~~~ 159 (292)
T cd06644 152 ADFGVSAK 159 (292)
T ss_pred ccCcccee
Confidence 99998863
No 179
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.96 E-value=8e-28 Score=287.78 Aligned_cols=146 Identities=17% Similarity=0.240 Sum_probs=127.7
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++.++||+|+||.||++.+. .++..+|+|.+... .......++. +|+++++.++||||++++
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~------~~~~~~a~k~~~~~-~~~~~~~~~~--------~E~~~l~~l~h~~iv~~~ 65 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHR------PSGLIMARKLIHLE-IKPAIRNQII--------RELKVLHECNSPYIVGFY 65 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEc------CCCeEEEEEEeccc-cCHHHHHHHH--------HHHHHHHhCCCCCCCeEE
Confidence 36999999999999999999864 46788999998653 2222223344 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCCeEecCCCceeEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
+++.+++.+|+||||++| +|.+++. ....+++..++.++.|++.||.|||+ ++|+||||||+|||++.++ .+||
T Consensus 66 ~~~~~~~~~~lv~ey~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~--~~~l 141 (308)
T cd06615 66 GAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRG--EIKL 141 (308)
T ss_pred EEEeeCCEEEEEeeccCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCC--cEEE
Confidence 999999999999999995 9999998 34668999999999999999999998 6999999999999999998 8999
Q ss_pred EecCCcc
Q 000316 320 CDKPLVG 326 (1678)
Q Consensus 320 ~DFGlA~ 326 (1678)
+|||+++
T Consensus 142 ~dfg~~~ 148 (308)
T cd06615 142 CDFGVSG 148 (308)
T ss_pred ccCCCcc
Confidence 9999886
No 180
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.96 E-value=5.6e-28 Score=282.82 Aligned_cols=148 Identities=15% Similarity=0.192 Sum_probs=127.1
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
.+.|++.+.||+|+||.||+|.+. .++..+|+|.+..... ...++. +|+.+++.+ +||||++
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~------~~~~~~aik~~~~~~~---~~~~~~--------~e~~~l~~~~~h~~i~~ 67 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHV------KTGQLAAIKVMDVTGD---EEEEIK--------QEINMLKKYSHHRNIAT 67 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEc------CCCcEEEEEEEEcCCc---cHHHHH--------HHHHHHHHhcCCCCeee
Confidence 456899999999999999999864 5678999999865322 122333 899999998 6999999
Q ss_pred eeeEEEeC------CeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCC
Q 000316 240 VLGLLKTS------GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1678)
Q Consensus 240 l~~~~~~~------~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 312 (1678)
+++++... ..+|+||||+++ +|.+++.......+++..++.++.|++.||.|||+++|+||||||+||+++.+
T Consensus 68 ~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~ 147 (272)
T cd06637 68 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTEN 147 (272)
T ss_pred EeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCC
Confidence 99999753 468999999995 99999986555678999999999999999999999999999999999999999
Q ss_pred CceeEEEEecCCccc
Q 000316 313 CWSWLYICDKPLVGF 327 (1678)
Q Consensus 313 g~~~lKL~DFGlA~~ 327 (1678)
+ .+||+|||+++.
T Consensus 148 ~--~~~l~Dfg~~~~ 160 (272)
T cd06637 148 A--EVKLVDFGVSAQ 160 (272)
T ss_pred C--CEEEccCCCcee
Confidence 9 899999999874
No 181
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.96 E-value=1.3e-28 Score=303.52 Aligned_cols=205 Identities=16% Similarity=0.184 Sum_probs=162.4
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
.|++++.||+|+||+||+|++. .+++.||+|++.+.........+.+. +|+.+|+.++||||+++++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~-------~E~~il~~l~h~~iv~l~~ 68 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKV------DTHALYAMKTLRKKDVLNRNQVAHVK-------AERDILAEADNEWVVKLYY 68 (381)
T ss_pred CceEEEEEeecCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhHHHHHHH-------HHHHHHHhcCCCCeeeeEE
Confidence 5899999999999999999965 57889999999764333322222222 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++.+.+.+|+||||++| +|.+++. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ ++||+|
T Consensus 69 ~~~~~~~~~lv~E~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~--~~kL~D 144 (381)
T cd05626 69 SFQDKDNLYFVMDYIPGGDMMSLLI--RMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDG--HIKLTD 144 (381)
T ss_pred EEecCCEEEEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCC--CEEEee
Confidence 99999999999999985 9999998 455689999999999999999999999999999999999999998 899999
Q ss_pred cCCcccCCCCCccc--c-------c---------------------------CCCCcceeecccccCccccccccccccc
Q 000316 322 KPLVGFNSIADWCT--I-------P---------------------------TSPMIGCCIEGCSSQGLYADLKLSQSMD 365 (1678)
Q Consensus 322 FGlA~~~~~~~~~~--~-------~---------------------------~~~~~~~~~~~~~gt~~Y~APE~~~~~~ 365 (1678)
||+++......... . . ......+......||+.|||||++.+..
T Consensus 145 FGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~ 224 (381)
T cd05626 145 FGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKG 224 (381)
T ss_pred CcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCC
Confidence 99986432100000 0 0 0000001112345899999999999999
Q ss_pred ccccccccccCccchhhhHh
Q 000316 366 WHSQFNRWWRGELSNFEYLL 385 (1678)
Q Consensus 366 y~~~~d~W~~G~isnfeyL~ 385 (1678)
|+.++|+|+.|+|. |+.++
T Consensus 225 ~~~~~DiwSlG~il-~ellt 243 (381)
T cd05626 225 YTQLCDWWSVGVIL-FEMLV 243 (381)
T ss_pred CCCccceeehhhHH-HHHHh
Confidence 99999999999665 44443
No 182
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.96 E-value=1.1e-28 Score=303.57 Aligned_cols=205 Identities=16% Similarity=0.184 Sum_probs=161.9
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
.+|++++.||+|+||.||+|++. .+++.||+|++.+...........+. +|+.+|+.++||||++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~------~~~~~~avK~~~~~~~~~~~~~~~~~-------~E~~il~~l~h~~iv~~~ 67 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKV------DTNALYAMKTLRKADVLMRNQAAHVK-------AERDILAEADNEWVVKLY 67 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEEC------CCCCEEEEEEEcHHHHHhhhhHHHHH-------HHHHHHHhCCCCCcceEE
Confidence 36999999999999999999965 46889999998653222222222222 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+.|.+++.+|+|||||+ |+|.+++. ..+.+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~E~~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~--~ikL~ 143 (376)
T cd05598 68 YSFQDKDNLYFVMDYIPGGDMMSLLI--RLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDG--HIKLT 143 (376)
T ss_pred EEEEcCCEEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCC--CEEEE
Confidence 99999999999999998 59999998 456789999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCccc-------------------c--c-----------CCCCcceeecccccCcccccccccccccccc
Q 000316 321 DKPLVGFNSIADWCT-------------------I--P-----------TSPMIGCCIEGCSSQGLYADLKLSQSMDWHS 368 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~-------------------~--~-----------~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~ 368 (1678)
|||+|.......... . . ......+......||+.|||||++.+..++.
T Consensus 144 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 223 (376)
T cd05598 144 DFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 223 (376)
T ss_pred eCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCc
Confidence 999985321100000 0 0 0000001122346899999999999999999
Q ss_pred cccccccCccchhhhH
Q 000316 369 QFNRWWRGELSNFEYL 384 (1678)
Q Consensus 369 ~~d~W~~G~isnfeyL 384 (1678)
++|+|+.|+|. |+.+
T Consensus 224 ~~DiwSlGvil-yell 238 (376)
T cd05598 224 LCDWWSVGVIL-YEML 238 (376)
T ss_pred ceeeeecccee-eehh
Confidence 99999999775 4444
No 183
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.96 E-value=4.5e-28 Score=286.13 Aligned_cols=149 Identities=15% Similarity=0.201 Sum_probs=128.6
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++++.||+|+||.||+|++. ..+..+|+|.+... .......++. +|+.+++.++||||++++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~------~~~~~~a~k~~~~~-~~~~~~~~~~--------~e~~~l~~~~~~~i~~~~ 65 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHR------PTGVTMAMKEIRLE-LDESKFNQII--------MELDILHKAVSPYIVDFY 65 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEc------CCCcEEEEEEeecc-cCHHHHHHHH--------HHHHHHHhcCCCcHHhhh
Confidence 46899999999999999999964 46789999998653 2233334444 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCCeEecCCCceeEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFS-PNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~-~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
+++..++.+|+||||++| +|..++... ....+++..++.++.||+.||.|||+ +||+||||||+||+++.++ .+|
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~--~~~ 143 (286)
T cd06622 66 GAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNG--QVK 143 (286)
T ss_pred hheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCC--CEE
Confidence 999999999999999996 998888732 13468999999999999999999997 6999999999999999988 899
Q ss_pred EEecCCccc
Q 000316 319 ICDKPLVGF 327 (1678)
Q Consensus 319 L~DFGlA~~ 327 (1678)
|+|||+++.
T Consensus 144 l~dfg~~~~ 152 (286)
T cd06622 144 LCDFGVSGN 152 (286)
T ss_pred EeecCCccc
Confidence 999999874
No 184
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.96 E-value=3.5e-27 Score=282.93 Aligned_cols=367 Identities=16% Similarity=0.182 Sum_probs=276.5
Q ss_pred hccccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCCC-ceeEEeccccccEEEEEEecCCCEEEEEecCCC
Q 000316 1274 EATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKA-SILSSIRAHHGALRSVAVGQDECTVFTAGIGPG 1350 (1678)
Q Consensus 1274 ~~~~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~~-~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~ 1350 (1678)
....++.||+..|.. |+..|.. |+|||.|+.|.+||+-+ .-+..++||.++|+..-|..+...++|.|.
T Consensus 98 ~~~~tfngHK~AVt~l~fd~~G~r-----laSGskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sK--- 169 (888)
T KOG0306|consen 98 EILITFNGHKAAVTTLKFDKIGTR-----LASGSKDTDIIVWDLVGEEGLFRLRGHKDSITQALFLNGDSFLVSVSK--- 169 (888)
T ss_pred ceeeeecccccceEEEEEcccCce-----EeecCCCccEEEEEeccceeeEEeecchHHHhHHhccCCCeEEEEecc---
Confidence 456788999999995 8777776 99999999999999874 467789999999999999998889999998
Q ss_pred CCCeEEEEeCCCCe------------------------------------------------------------------
Q 000316 1351 FKGTVQKWELTRIN------------------------------------------------------------------ 1364 (1678)
Q Consensus 1351 ~DgtVrlWDl~tg~------------------------------------------------------------------ 1364 (1678)
|+.|++||+++..
T Consensus 170 -Ds~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i 248 (888)
T KOG0306|consen 170 -DSMIKFWDLETQHCFETHVDHRGEIWALVLDEKLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREI 248 (888)
T ss_pred -CceEEEEecccceeeeEEecccceEEEEEEecceEEEEecCCceEEEEeecccccccccccceeeccceeeeccCCcee
Confidence 8999999862210
Q ss_pred --------------------------------------------------------------------------------
Q 000316 1365 -------------------------------------------------------------------------------- 1364 (1678)
Q Consensus 1365 -------------------------------------------------------------------------------- 1364 (1678)
T Consensus 249 ~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv 328 (888)
T KOG0306|consen 249 NLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDV 328 (888)
T ss_pred EEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEE
Confidence
Q ss_pred ------------------E------------------EEEEecCCccEEEEeecCCCCcEEeC-CCcEEEEECCCCceeE
Q 000316 1365 ------------------C------------------VSGYYGHEEVVNDICVLSSSGRIASC-DGTLHVWNSQTGKLLS 1407 (1678)
Q Consensus 1365 ------------------~------------------l~~l~gH~~~V~sV~fs~~~~~laS~-DgtVrIWD~~tg~~~~ 1407 (1678)
+ ..++.||...|.+++++.+...++|+ .+.|+||+..+.+|++
T Consensus 329 ~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga~~SikiWn~~t~kciR 408 (888)
T KOG0306|consen 329 TPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASGAGESIKIWNRDTLKCIR 408 (888)
T ss_pred EecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCceeeeecCCCcEEEEEccCcceeE
Confidence 0 01234788899999998887777887 7899999999999999
Q ss_pred EecccCccccccCCCCCCccccccccccccccCCCCC-CeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCC--
Q 000316 1408 VFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSS-GILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQ-- 1484 (1678)
Q Consensus 1408 ~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~-~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~t-- 1484 (1678)
++..... .+...-|.+..++.....+.+..+.-.+. -+..+.-+...+-.++.+||+..+++||.|.+|++||..-
T Consensus 409 Ti~~~y~-l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~ 487 (888)
T KOG0306|consen 409 TITCGYI-LASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVV 487 (888)
T ss_pred EeccccE-EEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEe
Confidence 9986521 11122233333322222221111111000 0111111222345566667899999999999999999742
Q ss_pred ---CeeeEEeeC-CCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEE
Q 000316 1485 ---GQKLHLWRG-EPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKL 1560 (1678)
Q Consensus 1485 ---g~~l~~l~~-~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sv 1560 (1678)
|...+.+.- |.........|.|+.++ |||.+||+|--|.+|+||-+.+-+..-++-||.-+|.|+
T Consensus 488 ~~~gt~~k~lsl~~~rtLel~ddvL~v~~S-----------pdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~sm 556 (888)
T KOG0306|consen 488 SVPGTQKKVLSLKHTRTLELEDDVLCVSVS-----------PDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSM 556 (888)
T ss_pred ccCcccceeeeeccceEEeccccEEEEEEc-----------CCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEE
Confidence 211111221 22223456778888775 667899999999999999999999999999999999999
Q ss_pred E-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEE--EEecCCEEEEEeCCC-eEEEecCCCCCCCCcceec
Q 000316 1561 A-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLV 1636 (1678)
Q Consensus 1561 a-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~ 1636 (1678)
. +||+++++|||.|++|+||-+.=| .+-..+-+|.+.|.+ |-|+...+.|+|.|+ |+.||-.. . ..
T Consensus 557 DIS~DSklivTgSADKnVKiWGLdFG--DCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~k------F--e~ 626 (888)
T KOG0306|consen 557 DISPDSKLIVTGSADKNVKIWGLDFG--DCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEK------F--EE 626 (888)
T ss_pred eccCCcCeEEeccCCCceEEeccccc--hhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhh------h--hh
Confidence 9 999999999999999999999888 667789999999996 899999999999999 99999430 1 01
Q ss_pred cceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1637 PQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1637 ~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
.+++ .+|...|++++.+|+|.+++++|.|.+||+|
T Consensus 627 iq~L------~~H~~ev~cLav~~~G~~vvs~shD~sIRlw 661 (888)
T KOG0306|consen 627 IQKL------DGHHSEVWCLAVSPNGSFVVSSSHDKSIRLW 661 (888)
T ss_pred heee------ccchheeeeeEEcCCCCeEEeccCCceeEee
Confidence 1222 2488999999999999999999999999999
No 185
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.96 E-value=1.2e-27 Score=287.00 Aligned_cols=152 Identities=25% Similarity=0.297 Sum_probs=132.8
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH-HHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
++|++.+.||+|+||.||+|.+. .++..+|+|.+........ ....+. +|+++++.++||||+++
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~ 66 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLK------GTGKLFALKVLDKKEMIKRNKVKRVL--------TEQEILATLDHPFLPTL 66 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEc------CCCcEEEEEEEeccccchHHHHHHHH--------HHHHHHHhCCCCCchhh
Confidence 46999999999999999999964 3678999999976543332 222333 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++.+.+....|+||||+.| +|.+++...+...+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~~l 144 (316)
T cd05574 67 YASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESG--HIML 144 (316)
T ss_pred eeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCC--CEEE
Confidence 9999999999999999985 999999855556799999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCC
Q 000316 320 CDKPLVGFNS 329 (1678)
Q Consensus 320 ~DFGlA~~~~ 329 (1678)
+|||++....
T Consensus 145 ~dfg~~~~~~ 154 (316)
T cd05574 145 SDFDLSKQSD 154 (316)
T ss_pred eecchhhccc
Confidence 9999998543
No 186
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.96 E-value=8.3e-28 Score=283.43 Aligned_cols=146 Identities=19% Similarity=0.208 Sum_probs=127.1
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
.|++.+.||+|+||.||++.+. .++..+++|.+... .......+. +|+++++.++||||+++++
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~------~~~~~~~~k~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~ii~~~~ 69 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNK------ETGVLAAAKVIDTK--SEEELEDYM--------VEIDILASCDHPNIVKLLD 69 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEEC------CCCeEEEEEEeCCC--CHHHHHHHH--------HHHHHHHHCCCCCeeeEEE
Confidence 4788999999999999999964 46788999998643 233334444 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++..++..|+||||+++ +|..++.. ....+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 70 ~~~~~~~~~~v~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~--~~kl~d 146 (282)
T cd06643 70 AFYYENNLWILIEFCAGGAVDAVMLE-LERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDG--DIKLAD 146 (282)
T ss_pred EEeeCCEEEEEEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCC--CEEEcc
Confidence 99999999999999995 88887763 345689999999999999999999999999999999999999998 899999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+++.
T Consensus 147 fg~~~~ 152 (282)
T cd06643 147 FGVSAK 152 (282)
T ss_pred cccccc
Confidence 999874
No 187
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=4.4e-27 Score=276.82 Aligned_cols=280 Identities=12% Similarity=0.168 Sum_probs=239.3
Q ss_pred ccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeE
Q 000316 1279 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTV 1355 (1678)
Q Consensus 1279 l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtV 1355 (1678)
+..|++.|-+ |.|...| +.++=..|+|.|||.+ +..++++.-..-+|++..|-+.-+.+++||+ |+.|
T Consensus 9 ~~~rSdRVKsVd~HPtePw-----~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsD----D~~I 79 (794)
T KOG0276|consen 9 FQSRSDRVKSVDFHPTEPW-----ILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSD----DMQI 79 (794)
T ss_pred hhccCCceeeeecCCCCce-----EEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecC----CceE
Confidence 3447888886 8999998 8899999999999998 6789999988999999999999999999997 9999
Q ss_pred EEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEEEECCCC-ceeEEecccCccccccCCCCCCccccccc
Q 000316 1356 QKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTG-KLLSVFAEQSMDSLHGGSPSSSISKINTD 1432 (1678)
Q Consensus 1356 rlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg-~~~~~l~~~~~~~~~~~s~s~~~~~~~~~ 1432 (1678)
||++..|++.+.+|.+|.+.|.+|+.+|...++ +|.|-+||+||.+.+ .|.++|.+|+
T Consensus 80 rVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~------------------- 140 (794)
T KOG0276|consen 80 RVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHE------------------- 140 (794)
T ss_pred EEEecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcc-------------------
Confidence 999999999999999999999999999999988 556999999999754 6778888764
Q ss_pred cccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCC
Q 000316 1433 QVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGS 1512 (1678)
Q Consensus 1433 ~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~ 1512 (1678)
--|.+++|.|. |.+.+++++-|+|||+|.+.+..+..++++|.. -|+||++-+.
T Consensus 141 -----------HyVMqv~fnPk---------D~ntFaS~sLDrTVKVWslgs~~~nfTl~gHek------GVN~Vdyy~~ 194 (794)
T KOG0276|consen 141 -----------HYVMQVAFNPK---------DPNTFASASLDRTVKVWSLGSPHPNFTLEGHEK------GVNCVDYYTG 194 (794)
T ss_pred -----------eEEEEEEecCC---------CccceeeeeccccEEEEEcCCCCCceeeecccc------CcceEEeccC
Confidence 23566667665 688999999999999999999999999997654 4889998542
Q ss_pred CccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCe
Q 000316 1513 EKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPT 1591 (1678)
Q Consensus 1513 ~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~ 1591 (1678)
.+-.++++|++|.+|+|||..|.+|++++.||...|..+. +|.-.+++|||.||+||||+..+- +...
T Consensus 195 ---------gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty--~lE~ 263 (794)
T KOG0276|consen 195 ---------GDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTY--KLEK 263 (794)
T ss_pred ---------CCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecCcce--ehhh
Confidence 2336999999999999999999999999999999999999 888899999999999999998876 3334
Q ss_pred EeecCCCCEEEEE--ecCCEEEEEeCCCeEEEec
Q 000316 1592 VFKGHTNGISGFS--VWGQDVISISNNKIGLSSL 1623 (1678)
Q Consensus 1592 ~l~gH~~~V~afS--pdg~~LaSgs~D~I~vwdl 1623 (1678)
++.-.-+.|+++. ..++.++.|.+++..+.++
T Consensus 264 tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~v~l 297 (794)
T KOG0276|consen 264 TLNYGLERVWCIAAHKGDGKIAVGFDEGSVTVKL 297 (794)
T ss_pred hhhcCCceEEEEeecCCCCeEEEeccCCcEEEEc
Confidence 5555566778766 5667788888877444444
No 188
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.96 E-value=1.5e-28 Score=300.94 Aligned_cols=201 Identities=16% Similarity=0.206 Sum_probs=160.8
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++++.||+|+||.||+|++. .++..||||++.+...........++ +|+.+|+.++||||++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~-------~E~~il~~l~h~~iv~~~ 67 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKK------DTGHIYAMKKLRKSEMLEKEQVAHVR-------AERDILAEADNPWVVKLY 67 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH-------HHHHHHHhCCCCCCcceE
Confidence 47999999999999999999975 46789999999764322222222332 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
++|.+++.+|+|||||+| +|.+++. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~E~~~~g~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~--~~kl~ 143 (364)
T cd05599 68 YSFQDENYLYLIMEYLPGGDMMTLLM--KKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKG--HIKLS 143 (364)
T ss_pred EEEEcCCeEEEEECCCCCcHHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC--CEEEe
Confidence 999999999999999985 9999998 355789999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccc----cC-----------CCC------------cceeecccccCccccccccccccccccccccc
Q 000316 321 DKPLVGFNSIADWCTI----PT-----------SPM------------IGCCIEGCSSQGLYADLKLSQSMDWHSQFNRW 373 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~----~~-----------~~~------------~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W 373 (1678)
|||+++.......... .. .+. .........||+.|+|||++.+..|+.++|+|
T Consensus 144 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw 223 (364)
T cd05599 144 DFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWW 223 (364)
T ss_pred ecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeee
Confidence 9999975432110000 00 000 00001123489999999999999999999999
Q ss_pred ccCccc
Q 000316 374 WRGELS 379 (1678)
Q Consensus 374 ~~G~is 379 (1678)
+.|++.
T Consensus 224 SlG~il 229 (364)
T cd05599 224 SLGVIM 229 (364)
T ss_pred cchhHH
Confidence 999664
No 189
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.96 E-value=1.1e-27 Score=282.20 Aligned_cols=143 Identities=15% Similarity=0.117 Sum_probs=123.6
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++++.||+|+||.||+|.+. .++..+|+|.+.... ......++. +|+++++.++||||++++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~aiK~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~~ 65 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHL------LTRRILAVKVIPLDI-TVELQKQIM--------SELEILYKCDSPYIIGFY 65 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEc------CCCcEEEEEEEecCC-ChHHHHHHH--------HHHHHHHhCCCCCeeeEE
Confidence 36889999999999999999964 467889999987542 222333444 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+.+...+..++||||+++ +|..+. .+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||+
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~--~~~l~ 137 (279)
T cd06619 66 GAFFVENRISICTEFMDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRG--QVKLC 137 (279)
T ss_pred EEEEECCEEEEEEecCCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCC--CEEEe
Confidence 999999999999999996 665432 367889999999999999999999999999999999999999 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||++..
T Consensus 138 dfg~~~~ 144 (279)
T cd06619 138 DFGVSTQ 144 (279)
T ss_pred eCCccee
Confidence 9999873
No 190
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.96 E-value=1.3e-27 Score=278.88 Aligned_cols=150 Identities=17% Similarity=0.136 Sum_probs=126.5
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.+.||+|+||.||+|.. .++..+|+|.+...........+.... ..+|+.+|+.++|+||+++++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-------~~~~~~avk~~~~~~~~~~~~~~~~~~----~~~e~~~l~~l~~~~i~~~~~ 69 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-------NQGQLIAVKQVELDTSNVLAAEKEYEK----LQEEVDLLKSLKHVNIVQYLG 69 (265)
T ss_pred CccccceEeccCCeEEEEEEE-------cCCCeEEEEEeecCccchhhHHHHHHH----HHHHHHHHHhcCCCCEeeEee
Confidence 488899999999999999974 357889999987543222111111110 118999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++.+.+..++||||++| +|.+++. ....+++..+..++.|++.||+|||+.||+|+||||+||++++++ .+||+|
T Consensus 70 ~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~--~~~l~d 145 (265)
T cd06631 70 TCLDDNTISIFMEFVPGGSISSILN--RFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNG--IIKLID 145 (265)
T ss_pred EeecCCeEEEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCC--eEEecc
Confidence 99999999999999985 9999997 345688999999999999999999999999999999999999998 899999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+++.
T Consensus 146 fg~~~~ 151 (265)
T cd06631 146 FGCARR 151 (265)
T ss_pred chhhHh
Confidence 999874
No 191
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=3.7e-29 Score=295.20 Aligned_cols=227 Identities=15% Similarity=0.153 Sum_probs=183.7
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
-|.+++.||-|+||+|.+++. ..+...+|+|.+.+...........++ .|..||.+.+.+.||+||.
T Consensus 630 mFvkik~iGvGAFGeV~Lv~K------vDT~~lYAmKTLrKaDVl~rnQvaHVK-------AERDILAEADn~WVVrLyy 696 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRK------VDTRALYAMKTLRKADVLMRNQVAHVK-------AERDILAEADNEWVVRLYY 696 (1034)
T ss_pred ceEEEeeecccccceeEEEee------cchhhHHHHhhhHHHHHHhhhhhhhhh-------hhhhhHhhcCCcceEEEEE
Confidence 589999999999999999983 367889999999876555555455555 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
.|++++++|+||||++| |+..+|- +.+.|.|..+++|+.++..|+++.|+.|.|||||||+|||||.+| +|||+|
T Consensus 697 SFQDkdnLYFVMdYIPGGDmMSLLI--rmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdG--HIKLTD 772 (1034)
T KOG0608|consen 697 SFQDKDNLYFVMDYIPGGDMMSLLI--RMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDG--HIKLTD 772 (1034)
T ss_pred EeccCCceEEEEeccCCccHHHHHH--HhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCC--ceeeee
Confidence 99999999999999995 9999987 578899999999999999999999999999999999999999999 999999
Q ss_pred cCCcccCCCCCc--cccc------C-----------------------CCCcceeecccccCcccccccccccccccccc
Q 000316 322 KPLVGFNSIADW--CTIP------T-----------------------SPMIGCCIEGCSSQGLYADLKLSQSMDWHSQF 370 (1678)
Q Consensus 322 FGlA~~~~~~~~--~~~~------~-----------------------~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~ 370 (1678)
|||+.-...... .... . .....|.....+||+.|+|||++....|+..|
T Consensus 773 FGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~c 852 (1034)
T KOG0608|consen 773 FGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLC 852 (1034)
T ss_pred ccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccc
Confidence 999974321100 0000 0 01122444566899999999999999999999
Q ss_pred cccccCccchhhhHhhhccccCCCCCCCcCCcccceEe
Q 000316 371 NRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI 408 (1678)
Q Consensus 371 d~W~~G~isnfeyL~~ln~~aGRs~~dl~q~pv~pwv~ 408 (1678)
|.|+.|.|. ||+|..-..|-..+.. -+||.|.-|-.
T Consensus 853 dwws~gvil-~em~~g~~pf~~~tp~-~tq~kv~nw~~ 888 (1034)
T KOG0608|consen 853 DWWSVGVIL-YEMLVGQPPFLADTPG-ETQYKVINWRN 888 (1034)
T ss_pred hhhHhhHHH-HHHhhCCCCccCCCCC-cceeeeeehhh
Confidence 999999776 6665544444433332 37888888864
No 192
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.96 E-value=5.9e-28 Score=293.35 Aligned_cols=147 Identities=25% Similarity=0.295 Sum_probs=124.7
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++.+.||+|+||.||+|.++ .++..||+|.+..... ...+... +|+.+++.++||||+++
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~------~~~~~v~iK~i~~~~~--~~~~~~~--------~Ei~~l~~l~h~~i~~~ 67 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDS------DCDKRVAVKKIVLTDP--QSVKHAL--------REIKIIRRLDHDNIVKV 67 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEEC------CCCcEEEEEEEecCCC--chHHHHH--------HHHHHHHhcCCCcchhh
Confidence 578999999999999999999965 5788999999865432 2223333 89999999999999999
Q ss_pred eeEEEeC--------------CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCC
Q 000316 241 LGLLKTS--------------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSN 306 (1678)
Q Consensus 241 ~~~~~~~--------------~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~N 306 (1678)
++++... ...|+||||++++|.+++. ...+++..++.++.||+.||.|||++||+||||||+|
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~N 144 (342)
T cd07854 68 YEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPAN 144 (342)
T ss_pred HhhhcccccccccccccccccceEEEEeecccccHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH
Confidence 9877654 3589999999999998886 3468999999999999999999999999999999999
Q ss_pred eEecCCCceeEEEEecCCccc
Q 000316 307 VLLTDSCWSWLYICDKPLVGF 327 (1678)
Q Consensus 307 ILl~~~g~~~lKL~DFGlA~~ 327 (1678)
|+++.++ ..+||+|||+++.
T Consensus 145 ili~~~~-~~~kl~dfg~~~~ 164 (342)
T cd07854 145 VFINTED-LVLKIGDFGLARI 164 (342)
T ss_pred EEEcCCC-ceEEECCccccee
Confidence 9998544 2789999999863
No 193
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.96 E-value=5.7e-28 Score=284.38 Aligned_cols=148 Identities=19% Similarity=0.205 Sum_probs=130.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||+|+||.||++.+. .++..+|+|.+... .......+. +|+.+++.++||||+++
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 67 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHK------ETGLFAAAKIIQIE--SEEELEDFM--------VEIDILSECKHPNIVGL 67 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEc------CCCcEEEEEEEeeC--CHHHHHHHH--------HHHHHHHhCCCCceeEE
Confidence 467999999999999999999864 36788999998653 233334454 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++..+...|+||||+++ +|.+++.. ....+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~--~~~l 144 (280)
T cd06611 68 YEAYFYENKLWILIEFCDGGALDSIMLE-LERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDG--DVKL 144 (280)
T ss_pred EEEEecCCeEEEEeeccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCC--CEEE
Confidence 9999999999999999996 99999873 345689999999999999999999999999999999999999999 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||++..
T Consensus 145 ~d~g~~~~ 152 (280)
T cd06611 145 ADFGVSAK 152 (280)
T ss_pred ccCccchh
Confidence 99998764
No 194
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.96 E-value=4.4e-28 Score=285.85 Aligned_cols=148 Identities=20% Similarity=0.295 Sum_probs=127.0
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++.++||+|+||.||+|.+. .++..+|+|.+.+..........+. +|+++++.++||||++++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 66 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHK------ETGQIVAIKKFLESEDDKMVKKIAM--------REIRMLKQLRHENLVNLI 66 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEEC------CCCCEEEEEeHhhccCcchhhHHHH--------HHHHHHHhcCCcchhhHH
Confidence 46999999999999999999964 3578999999876433332222333 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++.++...|+||||+++ .|..++. ....+++..++.++.||+.||.|||++||+||||||+||++++++ .+||+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~--~~~l~ 142 (286)
T cd07846 67 EVFRRKKRLYLVFEFVDHTVLDDLEK--YPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSG--VVKLC 142 (286)
T ss_pred HhcccCCeEEEEEecCCccHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC--cEEEE
Confidence 999999999999999996 6666655 334589999999999999999999999999999999999999998 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||+++.
T Consensus 143 dfg~~~~ 149 (286)
T cd07846 143 DFGFART 149 (286)
T ss_pred eeeeeee
Confidence 9999874
No 195
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.96 E-value=2.4e-30 Score=282.94 Aligned_cols=197 Identities=15% Similarity=0.193 Sum_probs=173.6
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
-|.++++||+|+||.||+|.++ +.|.++|||.+... .+..+.+ +||.||++++.|+||++||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~------EsG~v~AIK~VPV~----sDLQEII--------KEISIMQQC~S~yVVKYYG 95 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHR------ESGHVLAIKKVPVD----TDLQEII--------KEISIMQQCKSKYVVKYYG 95 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHh------ccCcEEEEEecCcc----chHHHHH--------HHHHHHHHcCCchhhhhhh
Confidence 4888999999999999999976 78999999998653 3444555 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
.+.....++||||||. |+..++++. +++.+++.++..+++..++||+|||...-||||||..|||++.+| +.||+|
T Consensus 96 SYFK~sDLWIVMEYCGAGSiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G--~AKLAD 172 (502)
T KOG0574|consen 96 SYFKHSDLWIVMEYCGAGSISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDG--IAKLAD 172 (502)
T ss_pred hhccCCceEeehhhcCCCcHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccc--hhhhhh
Confidence 9999999999999999 899999984 678899999999999999999999999999999999999999999 999999
Q ss_pred cCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCC-CCCC
Q 000316 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR-WGDY 398 (1678)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs-~~dl 398 (1678)
||.|...... .+. .....|||+|||||++....|+..+|+|+.| ++.+++..||+ |.|+
T Consensus 173 FGVAGQLTDT-----MAK------RNTVIGTPFWMAPEVI~EIGY~~~ADIWSLG-------ITaIEMAEG~PPYsDI 232 (502)
T KOG0574|consen 173 FGVAGQLTDT-----MAK------RNTVIGTPFWMAPEVIEEIGYDTKADIWSLG-------ITAIEMAEGRPPYSDI 232 (502)
T ss_pred ccccchhhhh-----HHh------hCccccCcccccHHHHHHhccchhhhHhhhc-------chhhhhhcCCCCcccc
Confidence 9999865421 111 1124599999999999999999999999999 88899999998 5664
No 196
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=1.2e-26 Score=251.79 Aligned_cols=277 Identities=15% Similarity=0.238 Sum_probs=219.7
Q ss_pred cccccCCCCceEe--ecCC-CCCCCCCeEEEEeCCCCEEEEeCCC----ceeEEe-ccccccEEEEEEecCCCEEEEEec
Q 000316 1276 TSNLMKCEPWFWF--PTPA-ASWDGPDFLGRVGGLKDESPWKIKA----SILSSI-RAHHGALRSVAVGQDECTVFTAGI 1347 (1678)
Q Consensus 1276 ~~~l~gH~~~V~~--fSpd-g~~~~~~~LasgS~D~~v~lWd~~~----~~l~tl-~gH~~~V~svafspdg~~LaSgS~ 1347 (1678)
...+.||++.||. ++|. |.. |||||.|+.||+|+..+ .+...+ .+|+.+|++|+|+|.|++|++||
T Consensus 7 ~~~~~gh~~r~W~~awhp~~g~i-----lAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aS- 80 (312)
T KOG0645|consen 7 EQKLSGHKDRVWSVAWHPGKGVI-----LASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASAS- 80 (312)
T ss_pred EEeecCCCCcEEEEEeccCCceE-----EEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEee-
Confidence 3567899999985 7887 665 99999999999999883 244444 47999999999999999999999
Q ss_pred CCCCCCeEEEEeCCCC--eEEEEEecCCccEEEEeecCCCCcEEeC--CCcEEEEECCCC---ceeEEecccCccccccC
Q 000316 1348 GPGFKGTVQKWELTRI--NCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTG---KLLSVFAEQSMDSLHGG 1420 (1678)
Q Consensus 1348 d~~~DgtVrlWDl~tg--~~l~~l~gH~~~V~sV~fs~~~~~laS~--DgtVrIWD~~tg---~~~~~l~~~~~~~~~~~ 1420 (1678)
||.++.||.-..+ +|+.+++||+..|.+|+|+++|.+||+| |+.|-||.+..+ ++...++.|..
T Consensus 81 ---FD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~Htq------ 151 (312)
T KOG0645|consen 81 ---FDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQ------ 151 (312)
T ss_pred ---ccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccc------
Confidence 6999999987644 7899999999999999999999999655 999999998755 35566665543
Q ss_pred CCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECC---CCeeeEEeeCCCCc
Q 000316 1421 SPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDIN---QGQKLHLWRGEPTE 1497 (1678)
Q Consensus 1421 s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~---tg~~l~~l~~~~~~ 1497 (1678)
.|..+.|+ |....|+++|.|++||+|+-. .-+++.++.+|.
T Consensus 152 ------------------------DVK~V~WH----------Pt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~-- 195 (312)
T KOG0645|consen 152 ------------------------DVKHVIWH----------PTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHE-- 195 (312)
T ss_pred ------------------------cccEEEEc----------CCcceeEEeccCCeEEEEeecCCCCeeEEEEecCcc--
Confidence 34444555 457899999999999999876 236788888654
Q ss_pred ccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEe-ccCCCeEEEEcCCCCEEEEEeCCCc
Q 000316 1498 LGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR-AHDGYVTKLAAPEDHLLVSSSLDKT 1576 (1678)
Q Consensus 1498 v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~-gH~~~V~svaspdg~~LaSgS~Dgt 1576 (1678)
.+|.+++|. +.|..++++++|++|+||-..+. +. .|+..+..+... ...++|++.|+.
T Consensus 196 ----~TVW~~~F~-----------~~G~rl~s~sdD~tv~Iw~~~~~-----~~~~~sr~~Y~v~W~-~~~IaS~ggD~~ 254 (312)
T KOG0645|consen 196 ----NTVWSLAFD-----------NIGSRLVSCSDDGTVSIWRLYTD-----LSGMHSRALYDVPWD-NGVIASGGGDDA 254 (312)
T ss_pred ----ceEEEEEec-----------CCCceEEEecCCcceEeeeeccC-----cchhcccceEeeeec-ccceEeccCCCE
Confidence 468899886 45679999999999999987632 22 478889988843 458999999999
Q ss_pred EEEEEcCCCCCCCCe-----EeecCCCCEEE--EEec-CCEEEEEeCCC-eEEEecC
Q 000316 1577 LRIWDLRRNWPSQPT-----VFKGHTNGISG--FSVW-GQDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1577 I~IWDl~~~~~~~~~-----~l~gH~~~V~a--fSpd-g~~LaSgs~D~-I~vwdl~ 1624 (1678)
|+++.-......+.. .-..|...|++ +.|. ...|++|++|| |++|.+.
T Consensus 255 i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 255 IRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred EEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 999987653212222 23567788886 6774 67899999999 9999863
No 197
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.96 E-value=1.6e-27 Score=278.12 Aligned_cols=151 Identities=21% Similarity=0.216 Sum_probs=127.3
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH---HHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ---ESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~---~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
+|.+.+.||+|+||.||+|.+. .++..+|+|.+........ ...+.... ..+|+.+++.++||||++
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~------~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~----~~~e~~~l~~l~h~~i~~ 70 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNA------SSGELMAVKQVELPSVSASSKDRKRSMLDA----LAREIALLKELQHENIVQ 70 (267)
T ss_pred CccccceeecCCCeEEEEEEec------CCCcEEEEEEecCCCcccchhHHHHHHHHH----HHHHHHHHHhcCCCCeee
Confidence 4788899999999999999964 3578899998865433221 11111111 128999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
+++++...+..++||||+++ +|.+++. ..+.+++..++.++.|++.||.|||++|++||||||+||++++++ .+|
T Consensus 71 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~--~~~ 146 (267)
T cd06628 71 YLGSSLDADHLNIFLEYVPGGSVAALLN--NYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKG--GIK 146 (267)
T ss_pred EEEEEEeCCccEEEEEecCCCCHHHHHH--hccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCC--CEE
Confidence 99999999999999999986 9999998 346688999999999999999999999999999999999999998 899
Q ss_pred EEecCCccc
Q 000316 319 ICDKPLVGF 327 (1678)
Q Consensus 319 L~DFGlA~~ 327 (1678)
|+|||+++.
T Consensus 147 l~dfg~~~~ 155 (267)
T cd06628 147 ISDFGISKK 155 (267)
T ss_pred ecccCCCcc
Confidence 999999874
No 198
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=7.1e-29 Score=276.74 Aligned_cols=146 Identities=21% Similarity=0.269 Sum_probs=122.5
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|.-++.+|.|.- .|.-|-+. -.++.||+|++.......... .++.||..++..++|+||+++
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~------v~~~~v~ikk~~~pf~n~~~a--------kra~rel~l~~~v~~~nii~l 80 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQ------VLGRPVAIKKLSRPFQNQTHA--------KRAYRELKLMKCVNHKNIISL 80 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchh------hccCceehhhhcCccccCccc--------hhhhhhhhhhhhhcccceeee
Confidence 568999999999998 66656544 467889999986542221111 245699999999999999999
Q ss_pred eeEEEeCC------eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 241 LGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 241 ~~~~~~~~------~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
+.+|.-.. .+|+|||+|..+|...+. ..+.-..++++++|++.|+.|||+.||+||||||+||++..++
T Consensus 81 ~n~ftP~~~l~~~~e~y~v~e~m~~nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~- 155 (369)
T KOG0665|consen 81 LNVFTPQKTLEEFQEVYLVMELMDANLCQVIL----MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDC- 155 (369)
T ss_pred eeccCccccHHHHHhHHHHHHhhhhHHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchh-
Confidence 99997543 689999999999999987 2356778899999999999999999999999999999999999
Q ss_pred eeEEEEecCCccc
Q 000316 315 SWLYICDKPLVGF 327 (1678)
Q Consensus 315 ~~lKL~DFGlA~~ 327 (1678)
.+||.|||+|+.
T Consensus 156 -~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 156 -TLKILDFGLART 167 (369)
T ss_pred -heeeccchhhcc
Confidence 999999999984
No 199
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.96 E-value=1.4e-27 Score=281.28 Aligned_cols=149 Identities=21% Similarity=0.290 Sum_probs=127.2
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHh-hccCCCCcccce
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSV-PGCLRHPNVAPV 240 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~i-L~~l~HpNIV~l 240 (1678)
++|++.+.||+|+||.||+|.++ .++..||+|.++..... ....+++ .|+.+ ++.++||||+++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~------~~~~~vaiK~~~~~~~~-~~~~~~~--------~e~~~~~~~~~~~~iv~~ 65 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHV------PTGTIMAVKRIRATVNS-QEQKRLL--------MDLDISMRSVDCPYTVTF 65 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEc------CCCcEEEEEEEecCCCc-HHHHHHH--------HHHHHHHHHcCCCCeeee
Confidence 47999999999999999999965 56899999998764322 2233444 56654 677799999999
Q ss_pred eeEEEeCCeEEEeccCCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCCeEecCCCceeE
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSL-GIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++++..++.+|+||||++|+|.+++... ....+++..++.++.||+.||.|||++ +++||||||+|||++.++ .+
T Consensus 66 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~--~~ 143 (283)
T cd06617 66 YGALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNG--QV 143 (283)
T ss_pred eEEEecCCcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCC--CE
Confidence 9999999999999999999998888642 345689999999999999999999997 999999999999999999 89
Q ss_pred EEEecCCccc
Q 000316 318 YICDKPLVGF 327 (1678)
Q Consensus 318 KL~DFGlA~~ 327 (1678)
||+|||+++.
T Consensus 144 kl~dfg~~~~ 153 (283)
T cd06617 144 KLCDFGISGY 153 (283)
T ss_pred EEeecccccc
Confidence 9999999874
No 200
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.95 E-value=1.8e-27 Score=275.93 Aligned_cols=148 Identities=20% Similarity=0.168 Sum_probs=130.1
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.+.||+|+||.||++++. .++..+|+|.+...........++. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSK------EDGKQYVIKEINISKMSPKEREESR--------KEVAVLSNMKHPNIVQYQE 66 (256)
T ss_pred CceEEEEeccCCceEEEEEEEc------CCCCEEEEEEEEhHhCChHHHHHHH--------HHHHHHHhCCCCCeeeeEe
Confidence 5899999999999999999964 4678899999875433333334444 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++...+..++||||+++ +|.+++.......+++..+..++.|++.||.|||++|++|+||||+|||++.++ .+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~--~~~l~d 144 (256)
T cd08218 67 SFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG--TIKLGD 144 (256)
T ss_pred eecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC--CEEEee
Confidence 99999999999999985 999999854445678999999999999999999999999999999999999988 899999
Q ss_pred cCCcc
Q 000316 322 KPLVG 326 (1678)
Q Consensus 322 FGlA~ 326 (1678)
||++.
T Consensus 145 ~~~~~ 149 (256)
T cd08218 145 FGIAR 149 (256)
T ss_pred cccee
Confidence 99986
No 201
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.95 E-value=9.6e-28 Score=282.19 Aligned_cols=145 Identities=24% Similarity=0.245 Sum_probs=124.5
Q ss_pred eeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-CCcccceee
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPVLG 242 (1678)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-HpNIV~l~~ 242 (1678)
|+++++||+|+||.||+|.+. .++..+|+|.++...... ...... +|+.++.++. ||||+++++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~------~~~~~~aik~~~~~~~~~-~~~~~~--------~e~~~l~~l~~h~~i~~~~~ 65 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSR------KTGKYYAIKCMKKHFKSL-EQVNNL--------REIQALRRLSPHPNILRLIE 65 (282)
T ss_pred CceEeeccccccceEEEEEEc------CCCcEEEEEEehhccCCc-hhhhHH--------HHHHHHhhcCCCCCccceEE
Confidence 678999999999999999964 467889999987542222 122222 7999999885 999999999
Q ss_pred EEEeC--CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 243 LLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 243 ~~~~~--~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
++.++ +.+++||||++++|.+.+.. ....+++..++.++.|++.||.|||++||+||||||+||+++. + .+||+
T Consensus 66 ~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~--~~kl~ 141 (282)
T cd07831 66 VLFDRKTGRLALVFELMDMNLYELIKG-RKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-D--ILKLA 141 (282)
T ss_pred EEecCCCCcEEEEEecCCccHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-C--CeEEE
Confidence 99988 89999999999999998874 2356899999999999999999999999999999999999999 7 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||+++.
T Consensus 142 dfg~~~~ 148 (282)
T cd07831 142 DFGSCRG 148 (282)
T ss_pred ecccccc
Confidence 9999874
No 202
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.95 E-value=2.4e-29 Score=299.89 Aligned_cols=204 Identities=17% Similarity=0.182 Sum_probs=178.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
+++|+.+++||+|+||.+++++++ .+...+++|.+...+......... .+|+.++++++|||||.+
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk------~~~~~~vlK~I~l~~~t~~~r~~A--------~~E~~lis~~~hP~iv~y 68 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHK------SDDKLYVLKKINLEKLTEPERRSA--------IQEMDLLSKLLHPNIVEY 68 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhc------cCCceEEEEEEeccccCchhhHHH--------HHHHHHHHhccCCCeeee
Confidence 678999999999999999999975 466799999998876666554433 399999999999999999
Q ss_pred eeEEEeCCe-EEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 241 LGLLKTSGL-ITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 241 ~~~~~~~~~-~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
++.|..++. ++|||+||+| +|.+.|...++..+++..+..|+.|++.||.|||++.|+|||||+.||+++.++ .||
T Consensus 69 ~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~--~Vk 146 (426)
T KOG0589|consen 69 KDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDK--KVK 146 (426)
T ss_pred ccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccC--cee
Confidence 999999887 9999999995 999999987778899999999999999999999999999999999999999999 899
Q ss_pred EEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccC
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1678)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aG 392 (1678)
|.|||+|+...... .....++|||.||.||++.+.+|+.+.|+|+.||+. ||.+..-..|.+
T Consensus 147 LgDfGlaK~l~~~~-----------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~-yEm~~lk~aF~a 208 (426)
T KOG0589|consen 147 LGDFGLAKILNPED-----------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCL-YEMCTLKPAFKA 208 (426)
T ss_pred ecchhhhhhcCCch-----------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchH-HHHHhcccccCc
Confidence 99999999765321 012346799999999999999999999999999987 777765554444
No 203
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.95 E-value=2.6e-27 Score=282.83 Aligned_cols=148 Identities=17% Similarity=0.184 Sum_probs=129.1
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH-HHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
++|++++.||+|+||.||++.+. ..+..||+|.+......... ...+. +|+++++.++||||+++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~------~~~~~v~ik~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~i~~~ 66 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHK------ETRQRFAMKKINKQNLILRNQIQQVF--------VERDILTFAENPFVVSM 66 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEEC------CCCcEEEEEEeehhhhhhHHHHHHHH--------HHHHHHHhCCCCCeeee
Confidence 36999999999999999999965 46788999998764322222 22233 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++.+.+++.+++||||++| +|.+++. ..+.+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~e~~~g~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~--~~~l 142 (305)
T cd05609 67 FCSFETKRHLCMVMEYVEGGDCATLLK--NIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMG--HIKL 142 (305)
T ss_pred EEEEecCCEEEEEEecCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCC--CEEE
Confidence 9999999999999999995 9999997 345689999999999999999999999999999999999999998 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||+++.
T Consensus 143 ~dfg~~~~ 150 (305)
T cd05609 143 TDFGLSKI 150 (305)
T ss_pred eeCCCccc
Confidence 99999874
No 204
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.95 E-value=1.4e-27 Score=290.34 Aligned_cols=149 Identities=22% Similarity=0.294 Sum_probs=127.6
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++++.||+|+||.||+|.+. .++..||+|.+............+. +|+.+|+.++||||++
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~ 78 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDR------RTGAKVAIKKLYRPFQSELFAKRAY--------RELRLLKHMKHENVIG 78 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEEC------CCCcEEEEEEecccccchHHHHHHH--------HHHHHHHhcCCCCccc
Confidence 4678999999999999999999864 5688999999865322222222333 8999999999999999
Q ss_pred eeeEEEeCC------eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC
Q 000316 240 VLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 240 l~~~~~~~~------~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g 313 (1678)
+++++.... .+++||||++++|.+++. ...+++..++.++.||+.||.|||++||+||||||+||+++.++
T Consensus 79 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~ 155 (343)
T cd07880 79 LLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDC 155 (343)
T ss_pred eeeeecCCccccccceEEEEEecCCCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence 999998654 468999999889998887 34689999999999999999999999999999999999999998
Q ss_pred ceeEEEEecCCccc
Q 000316 314 WSWLYICDKPLVGF 327 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 156 --~~kl~dfg~~~~ 167 (343)
T cd07880 156 --ELKILDFGLARQ 167 (343)
T ss_pred --CEEEeecccccc
Confidence 899999999863
No 205
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.95 E-value=2.6e-27 Score=274.70 Aligned_cols=149 Identities=21% Similarity=0.283 Sum_probs=132.4
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|+.++.||+|+||.||.+++. .++..+++|.+...........++. +|+.+++.++|+||+++++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~~~~ 66 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRT------EDDSLVVWKEVNLTRLSEKERRDAL--------NEIVILSLLQHPNIIAYYN 66 (256)
T ss_pred CceEeeEecccCCceEEEEEEc------CCCcEEEEEEEeecccchhHHHHHH--------HHHHHHHhCCCCCeeEEEe
Confidence 5999999999999999999865 5678899999876544444444554 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++.+.+.+++||||++| +|.+++.......+++..+..++.|++.||.|||++|++||||||+||+++.++ .+||+|
T Consensus 67 ~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~--~~kl~d 144 (256)
T cd08221 67 HFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAG--LIKLGD 144 (256)
T ss_pred EEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCC--CEEECc
Confidence 99999999999999985 999999854456789999999999999999999999999999999999999999 899999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+++.
T Consensus 145 ~~~~~~ 150 (256)
T cd08221 145 FGISKI 150 (256)
T ss_pred CcceEE
Confidence 999874
No 206
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.95 E-value=2e-27 Score=282.68 Aligned_cols=150 Identities=14% Similarity=0.108 Sum_probs=130.2
Q ss_pred ccccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCc
Q 000316 157 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 236 (1678)
Q Consensus 157 ~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpN 236 (1678)
......+|++.+.||+|+||.||+|.+. .++..+|+|.+...... ....+. +|+.+++.++|||
T Consensus 15 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~v~ik~~~~~~~~--~~~~~~--------~e~~~l~~~~h~~ 78 (296)
T cd06654 15 VGDPKKKYTRFEKIGQGASGTVYTAMDV------ATGQEVAIRQMNLQQQP--KKELII--------NEILVMRENKNPN 78 (296)
T ss_pred cCCcccceeeEEEecCCCCeEEEEEEEC------CCCcEEEEEEEecCCcc--hHHHHH--------HHHHHHHhCCCCC
Confidence 3344678999999999999999999864 46788999998764332 222333 8999999999999
Q ss_pred ccceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCce
Q 000316 237 VAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1678)
Q Consensus 237 IV~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~ 315 (1678)
|+++++.+..+...|+||||++| +|.+++. ...+++.++..++.|++.||.|||++||+||||||+|||++.++
T Consensus 79 v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~-- 153 (296)
T cd06654 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG-- 153 (296)
T ss_pred EeeEEEEEEeCCEEEEeecccCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC--
Confidence 99999999999999999999985 9999987 34578999999999999999999999999999999999999998
Q ss_pred eEEEEecCCccc
Q 000316 316 WLYICDKPLVGF 327 (1678)
Q Consensus 316 ~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 154 ~~kl~dfg~~~~ 165 (296)
T cd06654 154 SVKLTDFGFCAQ 165 (296)
T ss_pred CEEECccccchh
Confidence 899999999873
No 207
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.95 E-value=7.2e-28 Score=281.28 Aligned_cols=147 Identities=19% Similarity=0.212 Sum_probs=129.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|++. .++..+|+|.++... ......+. +|+.+++.++||||+++
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~--~~~~~~~~--------~e~~~~~~l~h~~ii~~ 71 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNV------NTGELAAIKVIKLEP--GEDFAVVQ--------QEIIMMKDCKHSNIVAY 71 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEc------CCCcEEEEEEEecCc--hhHHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 458999999999999999999864 467889999986532 12222233 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++...+.+|+||||+++ +|.+++. ..+.+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 72 ~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~--~~~l 147 (267)
T cd06645 72 FGSYLRRDKLWICMEFCGGGSLQDIYH--VTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNG--HVKL 147 (267)
T ss_pred EEEEEeCCEEEEEEeccCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEE
Confidence 9999999999999999995 9999987 456789999999999999999999999999999999999999998 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||++..
T Consensus 148 ~dfg~~~~ 155 (267)
T cd06645 148 ADFGVSAQ 155 (267)
T ss_pred CcceeeeE
Confidence 99999864
No 208
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=1e-27 Score=271.07 Aligned_cols=282 Identities=18% Similarity=0.267 Sum_probs=231.8
Q ss_pred eeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCC---eEEEEEecCCccEEEEeecCCCCcEEeC--CC
Q 000316 1319 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRI---NCVSGYYGHEEVVNDICVLSSSGRIASC--DG 1393 (1678)
Q Consensus 1319 ~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg---~~l~~l~gH~~~V~sV~fs~~~~~laS~--Dg 1393 (1678)
..+++..|++.|+-+.||++|++|||||. |.|+.+|++... +...++.||..+|..|.|+|+++++.+| |.
T Consensus 216 t~qil~~htdEVWfl~FS~nGkyLAsaSk----D~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e 291 (519)
T KOG0293|consen 216 TWQILQDHTDEVWFLQFSHNGKYLASASK----DSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDE 291 (519)
T ss_pred hhhhHhhCCCcEEEEEEcCCCeeEeeccC----CceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchH
Confidence 45678899999999999999999999998 999999987543 4478899999999999999999999555 88
Q ss_pred cEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEEC
Q 000316 1394 TLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIG 1473 (1678)
Q Consensus 1394 tVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~ 1473 (1678)
.+++||+.+|.+...+.... +..+++.+|.|||..+++|+.
T Consensus 292 ~~~lwDv~tgd~~~~y~~~~---------------------------------------~~S~~sc~W~pDg~~~V~Gs~ 332 (519)
T KOG0293|consen 292 VLSLWDVDTGDLRHLYPSGL---------------------------------------GFSVSSCAWCPDGFRFVTGSP 332 (519)
T ss_pred heeeccCCcchhhhhcccCc---------------------------------------CCCcceeEEccCCceeEecCC
Confidence 99999999999876665310 112567778889999999999
Q ss_pred CCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEecc
Q 000316 1474 NGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAH 1553 (1678)
Q Consensus 1474 DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH 1553 (1678)
|+++..||+. |+.+..|++.. ...|.++++. +||.++++...|..|++++..+...+..+. -
T Consensus 333 dr~i~~wdlD-gn~~~~W~gvr-----~~~v~dlait-----------~Dgk~vl~v~~d~~i~l~~~e~~~dr~lis-e 394 (519)
T KOG0293|consen 333 DRTIIMWDLD-GNILGNWEGVR-----DPKVHDLAIT-----------YDGKYVLLVTVDKKIRLYNREARVDRGLIS-E 394 (519)
T ss_pred CCcEEEecCC-cchhhcccccc-----cceeEEEEEc-----------CCCcEEEEEecccceeeechhhhhhhcccc-c
Confidence 9999999985 77777777543 2457777764 567899999999999999998766655444 4
Q ss_pred CCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE----EEEec-CCEEEEEeCCC-eEEEecCCC
Q 000316 1554 DGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS----GFSVW-GQDVISISNNK-IGLSSLSKS 1626 (1678)
Q Consensus 1554 ~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~----afSpd-g~~LaSgs~D~-I~vwdl~~~ 1626 (1678)
..+|+++. +.|+++++..=.+..|.+||+... ..+..+.||+.+-. ||... ..+++|||.|+ |++|+..
T Consensus 395 ~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~--~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~-- 470 (519)
T KOG0293|consen 395 EQPITSFSISKDGKLALVNLQDQEIHLWDLEEN--KLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRI-- 470 (519)
T ss_pred cCceeEEEEcCCCcEEEEEcccCeeEEeecchh--hHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEcc--
Confidence 56899999 999999999999999999999966 56678889987533 46654 47899999999 9999953
Q ss_pred CCCCCcceeccceeeeeecCCCccCcEEEEEEecCC-CEEEEEeCCCcEEEc
Q 000316 1627 ADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFS-RLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1627 ~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~-~lLatgs~DG~IrIw 1677 (1678)
.+++..+..| |...|++|+|+|.. .+||+||+||+||||
T Consensus 471 ----------sgkll~~LsG--Hs~~vNcVswNP~~p~m~ASasDDgtIRIW 510 (519)
T KOG0293|consen 471 ----------SGKLLAVLSG--HSKTVNCVSWNPADPEMFASASDDGTIRIW 510 (519)
T ss_pred ----------CCceeEeecC--CcceeeEEecCCCCHHHhhccCCCCeEEEe
Confidence 2355555555 88999999999966 689999999999999
No 209
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.95 E-value=1.2e-27 Score=289.52 Aligned_cols=158 Identities=16% Similarity=0.246 Sum_probs=129.3
Q ss_pred cCCCeeE-eeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH--HHHHHHh--cCCCchhHHHhhccCCC
Q 000316 160 IMTALFP-IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE--SKNFLRL--IGVPSFDESSVPGCLRH 234 (1678)
Q Consensus 160 ~~~~y~~-~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~--~~~~l~~--~~~~~~~Ei~iL~~l~H 234 (1678)
..++|.. .+.||+|+||+||+|.+. ..+..||+|.+......... ..+.... +.....+|+++++.++|
T Consensus 6 ~~~ry~~~~~~ig~G~~g~vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 79 (335)
T PTZ00024 6 ISERYIQKGAHLGEGTYGKVEKAYDT------LTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKH 79 (335)
T ss_pred cccchhhhhhcccCCCceeEEEEEEC------CCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCC
Confidence 3567865 577999999999999965 46789999998654222100 0111000 00012489999999999
Q ss_pred CcccceeeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 235 PNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 235 pNIV~l~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
|||+++++++..++..++||||++|+|.+++. ....+++..+..++.|++.||.|||++||+||||||+||+++.++
T Consensus 80 ~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~- 156 (335)
T PTZ00024 80 ENIMGLVDVYVEGDFINLVMDIMASDLKKVVD--RKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKG- 156 (335)
T ss_pred cceeeeeEEEecCCcEEEEEeccccCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCC-
Confidence 99999999999999999999999999999997 455689999999999999999999999999999999999999999
Q ss_pred eeEEEEecCCccc
Q 000316 315 SWLYICDKPLVGF 327 (1678)
Q Consensus 315 ~~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 157 -~~kl~dfg~~~~ 168 (335)
T PTZ00024 157 -ICKIADFGLARR 168 (335)
T ss_pred -CEEECCccceee
Confidence 899999999974
No 210
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.95 E-value=1.8e-27 Score=277.92 Aligned_cols=147 Identities=18% Similarity=0.192 Sum_probs=128.7
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|++. .++..+|+|++...... ....+. +|+.+++.++||||+++
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~------~~~~~~aik~~~~~~~~--~~~~~~--------~e~~~l~~~~h~~ii~~ 71 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNL------HTGELAAVKIIKLEPGD--DFSLIQ--------QEIFMVKECKHCNIVAY 71 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEEC------CCCeEEEEEEEecCccc--hHHHHH--------HHHHHHHhcCCCCeeee
Confidence 467999999999999999999964 46789999998653221 122222 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++..++.+|+||||+++ +|.+++. ....+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 72 ~~~~~~~~~~~iv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~--~~~l 147 (267)
T cd06646 72 FGSYLSREKLWICMEYCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNG--DVKL 147 (267)
T ss_pred eEEEEeCCEEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC--CEEE
Confidence 9999999999999999995 9999987 345689999999999999999999999999999999999999998 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||+++.
T Consensus 148 ~dfg~~~~ 155 (267)
T cd06646 148 ADFGVAAK 155 (267)
T ss_pred CcCcccee
Confidence 99999874
No 211
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.95 E-value=1.4e-27 Score=278.55 Aligned_cols=148 Identities=18% Similarity=0.186 Sum_probs=126.9
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH----HHHHHHhcCCCchhHHHhhccCCCCccc
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE----SKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~----~~~~l~~~~~~~~~Ei~iL~~l~HpNIV 238 (1678)
+|+..+.||+|+||.||++.+. .++..+|+|.+......... ...+. +|+++++.++||||+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~------~~~~~~alk~~~~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~iv 66 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDV------KTGTLMAVKQVTYVRNTSSEQEEVVEALR--------KEIRLMARLNHPHII 66 (268)
T ss_pred CccccceecCcCceEEEEEEEc------CCCcEEEEEEeecccCCchhHHHHHHHHH--------HHHHHHHHcCCCcee
Confidence 4888999999999999999864 56788999998754322211 12222 899999999999999
Q ss_pred ceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 239 ~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++++++.+.+..++||||++| +|.+++. ....+++..+..++.||+.||.|||++|++||||||+||+++.++ ..+
T Consensus 67 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~-~~~ 143 (268)
T cd06630 67 RMLGATCEDSHFNLFVEWMAGGSVSHLLS--KYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTG-QRL 143 (268)
T ss_pred hhhceeccCCeEEEEEeccCCCcHHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-CEE
Confidence 999999999999999999995 9999997 345688999999999999999999999999999999999998775 269
Q ss_pred EEEecCCccc
Q 000316 318 YICDKPLVGF 327 (1678)
Q Consensus 318 KL~DFGlA~~ 327 (1678)
||+|||+++.
T Consensus 144 ~l~dfg~~~~ 153 (268)
T cd06630 144 RIADFGAAAR 153 (268)
T ss_pred EEcccccccc
Confidence 9999999874
No 212
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.95 E-value=1.3e-27 Score=281.51 Aligned_cols=148 Identities=18% Similarity=0.211 Sum_probs=128.7
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.++||+|++|.||+|++. .++..||+|.+...... .....+. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~-~~~~~~~--------~E~~~l~~l~h~~i~~~~~ 65 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNR------TTGEIVALKEIHLDAEE-GTPSTAI--------REISLMKELKHENIVRLHD 65 (284)
T ss_pred CceEeeeeccCCceEEEEEEEC------CCCeEEEEEEecccccc-cchHHHH--------HHHHHHHhhcCCCEeeeee
Confidence 5899999999999999999964 46889999998754322 1122233 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPYTLENILQFSP-NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g~L~~~l~~~~-~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++.+.+..++||||++++|.+++.... ...+++..++.++.|++.||.|||++||+||||||+||++++++ .+||+|
T Consensus 66 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~--~~~l~d 143 (284)
T cd07836 66 VIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRG--ELKLAD 143 (284)
T ss_pred eEeeCCcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC--cEEEee
Confidence 999999999999999999999887432 24689999999999999999999999999999999999999998 899999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+++.
T Consensus 144 ~g~~~~ 149 (284)
T cd07836 144 FGLARA 149 (284)
T ss_pred cchhhh
Confidence 999863
No 213
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.95 E-value=2.4e-27 Score=277.09 Aligned_cols=148 Identities=17% Similarity=0.117 Sum_probs=125.5
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH--HHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE--SKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~--~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
+|+..+.||+|+||.||+|.+. .++..+|+|.+......... ....+. +|+.+++.++||||+++
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~~~~-------~e~~~l~~l~h~~i~~~ 69 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDV------DTGRELAAKQVQFDPESPETSKEVSALE-------CEIQLLKNLQHERIVQY 69 (266)
T ss_pred CccccceecCCCCEEEEEEEEc------CCCcEEEEEEeecCcCCchhHHHHHHHH-------HHHHHHHHcCCCCeeeE
Confidence 6899999999999999999864 46789999998754322211 112222 89999999999999999
Q ss_pred eeEEEeC--CeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 241 LGLLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 241 ~~~~~~~--~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++++.+. ..++++|||+++ +|.+++. ....+++..++.++.|++.||+|||+++|+||||||+||+++.++ .+
T Consensus 70 ~~~~~~~~~~~~~l~~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~--~~ 145 (266)
T cd06651 70 YGCLRDRAEKTLTIFMEYMPGGSVKDQLK--AYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAG--NV 145 (266)
T ss_pred EEEEEcCCCCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC--CE
Confidence 9998763 578999999985 9999997 345688999999999999999999999999999999999999988 89
Q ss_pred EEEecCCccc
Q 000316 318 YICDKPLVGF 327 (1678)
Q Consensus 318 KL~DFGlA~~ 327 (1678)
||+|||+++.
T Consensus 146 ~l~dfg~~~~ 155 (266)
T cd06651 146 KLGDFGASKR 155 (266)
T ss_pred EEccCCCccc
Confidence 9999999874
No 214
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.95 E-value=2.6e-27 Score=288.04 Aligned_cols=149 Identities=23% Similarity=0.296 Sum_probs=127.0
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++.+.||+|+||.||+|.+. .++..||+|++............+. +|+.+++.++||||++
T Consensus 15 ~~~~y~~~~~lg~G~~g~v~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~Ei~~l~~l~h~~iv~ 80 (345)
T cd07877 15 VPERYQNLSPVGSGAYGSVCAAFDT------KTGLRVAVKKLSRPFQSIIHAKRTY--------RELRLLKHMKHENVIG 80 (345)
T ss_pred ccCceEEEEEeeecCCeEEEEEEEc------CCCeEEEEEEecCcchhhHHHHHHH--------HHHHHHHHcCCCcccc
Confidence 4678999999999999999999864 4678999999875432222223333 8999999999999999
Q ss_pred eeeEEEeC------CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC
Q 000316 240 VLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 240 l~~~~~~~------~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g 313 (1678)
+++++... ...|++++++.++|.++++ ...+++..++.++.|++.||.|||++||+||||||+||+++.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~lv~~~~~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~ 157 (345)
T cd07877 81 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 157 (345)
T ss_pred eeeeeeecccccccccEEEEehhcccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCC
Confidence 99998643 3578999999889998887 23589999999999999999999999999999999999999999
Q ss_pred ceeEEEEecCCccc
Q 000316 314 WSWLYICDKPLVGF 327 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 158 --~~kl~dfg~~~~ 169 (345)
T cd07877 158 --ELKILDFGLARH 169 (345)
T ss_pred --CEEEeccccccc
Confidence 899999999863
No 215
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.95 E-value=2.3e-27 Score=282.35 Aligned_cols=148 Identities=14% Similarity=0.107 Sum_probs=129.2
Q ss_pred ccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccc
Q 000316 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1678)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV 238 (1678)
....+|++++.||+|+||.||+|.+. .++..||+|.+...... ....+. +|+.+++.++||||+
T Consensus 16 ~~~~~y~~~~~lg~g~~g~v~~~~~~------~~~~~vaiK~~~~~~~~--~~~~~~--------~e~~~l~~~~h~~i~ 79 (297)
T cd06656 16 DPKKKYTRFEKIGQGASGTVYTAIDI------ATGQEVAIKQMNLQQQP--KKELII--------NEILVMRENKNPNIV 79 (297)
T ss_pred ChhhhceeeeeeccCCCeEEEEEEEC------CCCCEEEEEEEecCccc--hHHHHH--------HHHHHHHhCCCCCEe
Confidence 34578999999999999999999964 56889999998754322 222233 899999999999999
Q ss_pred ceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 239 ~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++++++..++..|+||||++| +|.+++. ...+++..+..++.|++.||.|||+.||+||||||+|||++.++ .+
T Consensus 80 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~--~~ 154 (297)
T cd06656 80 NYLDSYLVGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDG--SV 154 (297)
T ss_pred eEEEEEecCCEEEEeecccCCCCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CE
Confidence 999999999999999999985 9999987 34578999999999999999999999999999999999999998 89
Q ss_pred EEEecCCccc
Q 000316 318 YICDKPLVGF 327 (1678)
Q Consensus 318 KL~DFGlA~~ 327 (1678)
||+|||+++.
T Consensus 155 ~l~Dfg~~~~ 164 (297)
T cd06656 155 KLTDFGFCAQ 164 (297)
T ss_pred EECcCccceE
Confidence 9999999863
No 216
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.95 E-value=1.6e-27 Score=280.80 Aligned_cols=148 Identities=22% Similarity=0.253 Sum_probs=129.2
Q ss_pred eeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeE
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1678)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~ 243 (1678)
|++.+.||+|++|.||+|.++ .++..||+|++............+. +|+.+++.++||||++++++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~E~~~l~~l~~~~iv~~~~~ 66 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDK------LTGEIVALKKIRLETEDEGVPSTAI--------REISLLKELNHPNIVRLLDV 66 (283)
T ss_pred CchheEecCCCCeEEEEEEEc------CCCCEEEEEEeecccccccchhHHH--------HHHHHHHhcCCCCccCHhhe
Confidence 678899999999999999964 4688999999876433222223333 89999999999999999999
Q ss_pred EEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecC
Q 000316 244 LKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1678)
Q Consensus 244 ~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFG 323 (1678)
+.+++..|+||||++++|.+++.......+++..+..++.|++.||.|||+++++||||+|+||+++.++ .+||+|||
T Consensus 67 ~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~--~~~l~df~ 144 (283)
T cd07835 67 VHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREG--ALKLADFG 144 (283)
T ss_pred eccCCeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCC--cEEEeecc
Confidence 9999999999999998999999854445689999999999999999999999999999999999999988 89999999
Q ss_pred Cccc
Q 000316 324 LVGF 327 (1678)
Q Consensus 324 lA~~ 327 (1678)
+++.
T Consensus 145 ~~~~ 148 (283)
T cd07835 145 LARA 148 (283)
T ss_pred cccc
Confidence 9863
No 217
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.95 E-value=4.6e-27 Score=272.16 Aligned_cols=150 Identities=21% Similarity=0.200 Sum_probs=130.4
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.+.||+|+||.||+|.+. .++..+|+|.+............+. +|+.+|+.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~i~~~~~ 66 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRK------ADQKLVIIKQIPVEQMTKDERLAAQ--------NECQVLKLLSHPNIIEYYE 66 (256)
T ss_pred CceEEEEecccCceEEEEEEEc------CCCcEEEEEEEeccccccHHHHHHH--------HHHHHHhhCCCCchhheee
Confidence 5899999999999999999964 4678899999876544444444444 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
.+..++..++||||++| +|.+++.......+++..++.++.|++.||.|||++||+||||||+||+++.++ ..+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~-~~~~l~d 145 (256)
T cd08220 67 NFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHK-MVVKIGD 145 (256)
T ss_pred eEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-CEEEEcc
Confidence 99999999999999985 999999854455689999999999999999999999999999999999998655 2689999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+++.
T Consensus 146 ~~~~~~ 151 (256)
T cd08220 146 FGISKI 151 (256)
T ss_pred CCCcee
Confidence 999874
No 218
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.95 E-value=5.3e-28 Score=295.86 Aligned_cols=205 Identities=16% Similarity=0.168 Sum_probs=162.4
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++++.||+|+||.||+|+++ .++..||+|++.............++ +|+.++..++||||++++
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~l~~~~iv~~~ 67 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKK------DTGHIYAMKILRKADMLEKEQVAHIR-------AERDILVEADGAWVVKMF 67 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHHhhhhhHHHHH-------HHHHHHHhCCCCCEeeEE
Confidence 46999999999999999999965 46889999999753322222222332 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+.+.+++.+|+||||++| +|.+++. ....+++..++.++.|++.||+|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~E~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~--~vkL~ 143 (360)
T cd05627 68 YSFQDKRNLYLIMEFLPGGDMMTLLM--KKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKG--HVKLS 143 (360)
T ss_pred EEEEcCCEEEEEEeCCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC--CEEEe
Confidence 999999999999999995 9999997 456789999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccc------cC----------C---C-----CcceeecccccCcccccccccccccccccccccccC
Q 000316 321 DKPLVGFNSIADWCTI------PT----------S---P-----MIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 376 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~------~~----------~---~-----~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G 376 (1678)
|||+++.......... .. . . ..........||+.|+|||++.+..|+.++|+|+.|
T Consensus 144 DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlG 223 (360)
T cd05627 144 DFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLG 223 (360)
T ss_pred eccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecccc
Confidence 9999875432110000 00 0 0 000001123589999999999999999999999999
Q ss_pred ccchhhhH
Q 000316 377 ELSNFEYL 384 (1678)
Q Consensus 377 ~isnfeyL 384 (1678)
++. |+++
T Consensus 224 vil-yel~ 230 (360)
T cd05627 224 VIM-YEML 230 (360)
T ss_pred cee-eecc
Confidence 765 4443
No 219
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.95 E-value=4.5e-28 Score=297.40 Aligned_cols=197 Identities=17% Similarity=0.215 Sum_probs=160.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|++. .++..+|+|.+.+.........+.+. +|+.+++.++||||+++
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~i~~~~~hp~iv~~ 108 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHK------SSQKVYAMKLLSKFEMIKRSDSAFFW-------EERDIMAFANSPWVVQL 108 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhhHHHHH-------HHHHHHHhCCCCCEeeE
Confidence 468999999999999999999965 46789999998753332222223332 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+++.+|+|||||+| +|.+++.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||
T Consensus 109 ~~~~~~~~~~~lv~Ey~~gg~L~~~l~~---~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~--~~kL 183 (370)
T cd05621 109 FCAFQDDKYLYMVMEYMPGGDLVNLMSN---YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHG--HLKL 183 (370)
T ss_pred EEEEEcCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC--CEEE
Confidence 9999999999999999984 99999973 3578999999999999999999999999999999999999999 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCccccccccccccc----ccccccccccCccchhhhHhh
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD----WHSQFNRWWRGELSNFEYLLF 386 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~----y~~~~d~W~~G~isnfeyL~~ 386 (1678)
+|||+|+........ ......||+.|||||++.+.. |+.++|+|+.|++. |+.++.
T Consensus 184 ~DFG~a~~~~~~~~~----------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~il-yell~G 243 (370)
T cd05621 184 ADFGTCMKMDETGMV----------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL-FEMLVG 243 (370)
T ss_pred EecccceecccCCce----------ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHH-HHHHhC
Confidence 999999854311100 011234799999999987643 78899999999664 444433
No 220
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.95 E-value=1.9e-27 Score=280.38 Aligned_cols=142 Identities=15% Similarity=0.154 Sum_probs=117.4
Q ss_pred eeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHH---hhccCCCCcccceeeEEE
Q 000316 169 FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESS---VPGCLRHPNVAPVLGLLK 245 (1678)
Q Consensus 169 ~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~---iL~~l~HpNIV~l~~~~~ 245 (1678)
.||+|+||.||++.+. .++..+|+|.+.+............. +|.. ++...+||||+.+++++.
T Consensus 1 ~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~ 67 (279)
T cd05633 1 IIGRGGFGEVYGCRKA------DTGKMYAMKCLDKKRIKMKQGETLAL-------NERIMLSLVSTGDCPFIVCMTYAFH 67 (279)
T ss_pred CcccCCCeEEEEEEEC------CCCcEEEEEEEEccccccchHHHHHH-------HHHHHHHHHhhCCCCcEeEEEEEEe
Confidence 4899999999999964 46889999998765433222222111 4443 344457999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
.++..++||||++| +|.+++. ..+.+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 68 ~~~~~~lv~e~~~~~~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~--~~~l~dfg~ 143 (279)
T cd05633 68 TPDKLCFILDLMNGGDLHYHLS--QHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVRISDLGL 143 (279)
T ss_pred cCCeEEEEEecCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCC--CEEEccCCc
Confidence 99999999999995 9999887 455689999999999999999999999999999999999999998 899999999
Q ss_pred ccc
Q 000316 325 VGF 327 (1678)
Q Consensus 325 A~~ 327 (1678)
++.
T Consensus 144 ~~~ 146 (279)
T cd05633 144 ACD 146 (279)
T ss_pred cee
Confidence 863
No 221
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.95 E-value=5.3e-28 Score=292.58 Aligned_cols=190 Identities=17% Similarity=0.227 Sum_probs=160.8
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH-HHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
++|++++.||+|+||.||+|++. .++..||+|++.+...... ....+. +|+.+|+.++||||+++
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~iv~~ 66 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKK------DTGEIVALKRMKKSLLFKLNEVRHVL--------TERDILTTTKSEWLVKL 66 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhHHHHHH--------HHHHHHHhCCCCCCccE
Confidence 36999999999999999999964 4678999999976432221 222233 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+.+.+|+||||++| +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~e~~~g~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~kL 142 (333)
T cd05600 67 LYAFQDDEYLYLAMEYVPGGDFRTLLN--NLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASG--HIKL 142 (333)
T ss_pred EEEEEcCCEEEEEEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC--CEEE
Confidence 9999999999999999985 9999997 456789999999999999999999999999999999999999999 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhH
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 384 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL 384 (1678)
+|||+++.... ......||+.|+|||++.+..|+.++|+|+.|++. |+++
T Consensus 143 ~Dfg~a~~~~~--------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il-~ell 192 (333)
T cd05600 143 TDFGLSKGIVT--------------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCML-YEFL 192 (333)
T ss_pred EeCcCCccccc--------------ccCCcccCccccChhHhcCCCCCCccceecchHHH-hhhh
Confidence 99999985432 01123478999999999999999999999999664 4443
No 222
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.95 E-value=1.1e-27 Score=289.09 Aligned_cols=147 Identities=23% Similarity=0.352 Sum_probs=128.2
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.+.||+|+||.||+|++. .++..+|+|.+..........+.+. +|+.+++.++||||+++++
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDK------RTGRKVAIKKISNVFDDLIDAKRIL--------REIKLLRHLRHENIIGLLD 66 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeC------CCCcEEEEEeeccccccchhhhhHH--------HHHHHHHhcCCcchhhhhh
Confidence 5899999999999999999964 4578899999875422222223333 8999999999999999999
Q ss_pred EEEeCC-----eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 243 LLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 243 ~~~~~~-----~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++.... .+|+||||++++|.+++. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~~~l~~~l~--~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~--~~ 142 (330)
T cd07834 67 ILRPPSPEDFNDVYIVTELMETDLHKVIK--SPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNC--DL 142 (330)
T ss_pred hhcccCcccccceEEEecchhhhHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC--CE
Confidence 998875 799999999999999997 345789999999999999999999999999999999999999998 89
Q ss_pred EEEecCCccc
Q 000316 318 YICDKPLVGF 327 (1678)
Q Consensus 318 KL~DFGlA~~ 327 (1678)
||+|||++..
T Consensus 143 ~L~dfg~~~~ 152 (330)
T cd07834 143 KICDFGLARG 152 (330)
T ss_pred EEcccCceEe
Confidence 9999999874
No 223
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.95 E-value=2.8e-27 Score=287.51 Aligned_cols=148 Identities=24% Similarity=0.308 Sum_probs=125.0
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|.+.+.||+|+||.||+|++. .++..||+|.+.+..........+. +|+.+++.++||||++
T Consensus 13 ~~~~y~~~~~ig~g~~g~v~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~niv~ 78 (342)
T cd07879 13 LPERYTSLKQVGSGAYGSVCSAIDK------RTGEKVAIKKLSRPFQSEIFAKRAY--------RELTLLKHMQHENVIG 78 (342)
T ss_pred cccceEEEEEeeecCCeEEEEEEeC------CCCcEEEEEEecCccccccchhHHH--------HHHHHHHhcCCCCccc
Confidence 3568999999999999999999864 4678999999875322222222333 8999999999999999
Q ss_pred eeeEEEeCC------eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC
Q 000316 240 VLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 240 l~~~~~~~~------~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g 313 (1678)
+++++.... .+|+||||+..+|..++. ..+++..++.++.|++.||.|||++||+||||||+|||++.++
T Consensus 79 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~ 154 (342)
T cd07879 79 LLDVFTSAVSGDEFQDFYLVMPYMQTDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDC 154 (342)
T ss_pred hhheecccccCCCCceEEEEecccccCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC
Confidence 999987543 569999999888877653 3578999999999999999999999999999999999999999
Q ss_pred ceeEEEEecCCccc
Q 000316 314 WSWLYICDKPLVGF 327 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 155 --~~kL~dfg~~~~ 166 (342)
T cd07879 155 --ELKILDFGLARH 166 (342)
T ss_pred --CEEEeeCCCCcC
Confidence 899999999873
No 224
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.95 E-value=3.3e-28 Score=292.71 Aligned_cols=215 Identities=17% Similarity=0.208 Sum_probs=180.0
Q ss_pred ccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccc
Q 000316 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1678)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV 238 (1678)
+....|.+.++||+|.|+.|.+|++. .++..||||.+.+..........+. +|+++|+.|+|||||
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~------~t~~~VaiK~idkt~ln~~~~~k~~--------rev~imk~l~HPnIv 118 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHI------LTGTEVAIKIIDKTQLNPSKRQKLG--------REVDIMKSLNHPNIV 118 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEec------CCCceEEEEEehhcccChHHHHHHH--------HHHHHHHhcCCccee
Confidence 34678999999999999999999976 4688999999998766655544444 999999999999999
Q ss_pred ceeeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 239 PVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 239 ~l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
+++.+..+...+|+||||+. |++++++. +.+.+.+..++.++.|+++|++|||+++|+|||||.+||||+.+. .+
T Consensus 119 kl~~v~~t~~~lylV~eya~~ge~~~yl~--~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~m--ni 194 (596)
T KOG0586|consen 119 KLFSVIETEATLYLVMEYASGGELFDYLV--KHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENM--NI 194 (596)
T ss_pred eeeeeeeecceeEEEEEeccCchhHHHHH--hcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccccccc--ce
Confidence 99999999999999999998 59999999 567788899999999999999999999999999999999999999 89
Q ss_pred EEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccccccccc-ccccccccCccchhhhHhhhccccCCCCC
Q 000316 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWH-SQFNRWWRGELSNFEYLLFLNKLAGRRWG 396 (1678)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~-~~~d~W~~G~isnfeyL~~ln~~aGRs~~ 396 (1678)
||+|||++.+.... ....+.| |++.|+|||++.+.+|+ +.+|.|+.|.+. |-.+...-+|-|.+..
T Consensus 195 kIaDfgfS~~~~~~------~~lqt~c------gsppyAaPEl~~g~~y~gpe~D~Wslgvvl-y~LV~GsLPFDG~~lk 261 (596)
T KOG0586|consen 195 KIADFGFSTFFDYG------LMLQTFC------GSPPYAAPELFNGKKYDGPEVDIWSLGVVL-YALVEGSLPFDGQNLK 261 (596)
T ss_pred eeeccccceeeccc------ccccccC------CCCCccChHhhcCcccCCcceehhhhhhhh-eeeeecccccCCcccc
Confidence 99999999875521 1122223 78999999999999995 599999999876 4445555556666665
Q ss_pred CCcCCccc
Q 000316 397 DYTFHMVM 404 (1678)
Q Consensus 397 dl~q~pv~ 404 (1678)
.+....++
T Consensus 262 ~Lr~rvl~ 269 (596)
T KOG0586|consen 262 ELRPRVLR 269 (596)
T ss_pred cccchhee
Confidence 55554443
No 225
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.95 E-value=6.2e-27 Score=272.65 Aligned_cols=149 Identities=19% Similarity=0.175 Sum_probs=129.9
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++.+.||.|+||+||+|... .++..+|+|++....... ....+. +|+.+|+.++||||++++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~-~~~~~~--------~e~~~l~~l~~~~i~~~~ 65 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICL------PNNEKVAIKRIDLEKCQT-SVDELR--------KEVQAMSQCNHPNVVKYY 65 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEc------CCCcEEEEEEeccCCcch-HHHHHH--------HHHHHHHhcCCCCEEEEE
Confidence 47999999999999999999854 467889999987643333 333444 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSP-NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~-~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
+.+..++..++|||+++| +|.+++.... ...+++..++.++.|++.||.|||++||+||||||+||++++++ .+||
T Consensus 66 ~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~--~~~l 143 (267)
T cd06610 66 TSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDG--SVKI 143 (267)
T ss_pred EEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCC--CEEE
Confidence 999999999999999985 9999997432 25689999999999999999999999999999999999999998 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||++..
T Consensus 144 ~df~~~~~ 151 (267)
T cd06610 144 ADFGVSAS 151 (267)
T ss_pred cccchHHH
Confidence 99999864
No 226
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.95 E-value=4e-27 Score=284.78 Aligned_cols=149 Identities=19% Similarity=0.227 Sum_probs=123.9
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCccccee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVL 241 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~l~ 241 (1678)
+|++.+.||+|+||.||++++.. ...+..+|+|.+............+. +|+.+++.+ +||||++++
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~----~~~~~~~aiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~~h~~iv~~~ 68 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAE----TSEEETVAIKKITNVFSKKILAKRAL--------RELKLLRHFRGHKNITCLY 68 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCC----CCcCceEEEEEeccccccchhHHHHH--------HHHHHHHHhcCCCChheee
Confidence 58999999999999999999641 11267899999864322222223333 899999999 599999999
Q ss_pred eEEEeC----CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 242 GLLKTS----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 242 ~~~~~~----~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
+.+... ..+|++|||++++|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+
T Consensus 69 ~~~~~~~~~~~~~~~~~e~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~--~~ 144 (332)
T cd07857 69 DMDIVFPGNFNELYLYEELMEADLHQIIR--SGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADC--EL 144 (332)
T ss_pred eeeeeccccCCcEEEEEecccCCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCC--CE
Confidence 975432 4688999999999999997 456789999999999999999999999999999999999999999 89
Q ss_pred EEEecCCccc
Q 000316 318 YICDKPLVGF 327 (1678)
Q Consensus 318 KL~DFGlA~~ 327 (1678)
||+|||+++.
T Consensus 145 kl~Dfg~a~~ 154 (332)
T cd07857 145 KICDFGLARG 154 (332)
T ss_pred EeCcCCCcee
Confidence 9999999974
No 227
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.95 E-value=2.4e-27 Score=288.18 Aligned_cols=149 Identities=24% Similarity=0.316 Sum_probs=128.3
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++.+.||+|+||.||+|++. .++..+|+|.+.............. +|+.+++.++||||++
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~ 78 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDT------KTGRKVAIKKLSRPFQSAIHAKRTY--------RELRLLKHMDHENVIG 78 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEEC------CCCcEEEEEecccccchhhHHHHHH--------HHHHHHHhccCCCHHH
Confidence 3668999999999999999999964 4678899999865322222223333 8999999999999999
Q ss_pred eeeEEEeCCe------EEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC
Q 000316 240 VLGLLKTSGL------ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 240 l~~~~~~~~~------~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g 313 (1678)
+++++...+. .++|+||++++|.+++. ...+++..++.++.|++.||.|||++||+||||||+||+++.++
T Consensus 79 ~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~---~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~ 155 (343)
T cd07851 79 LLDVFTPASSLEDFQDVYLVTHLMGADLNNIVK---CQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 155 (343)
T ss_pred HHHHhhccccccccccEEEEEecCCCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC
Confidence 9998876654 89999999889999987 34689999999999999999999999999999999999999999
Q ss_pred ceeEEEEecCCccc
Q 000316 314 WSWLYICDKPLVGF 327 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~ 327 (1678)
.+||+|||++..
T Consensus 156 --~~kL~dfg~~~~ 167 (343)
T cd07851 156 --ELKILDFGLARH 167 (343)
T ss_pred --CEEEcccccccc
Confidence 899999999874
No 228
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.95 E-value=3.6e-27 Score=277.83 Aligned_cols=148 Identities=16% Similarity=0.186 Sum_probs=126.5
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
.+.|++.+.||.|+||.||+|++. .++..+|+|.+.... ....++. +|+.+++.+ +||||++
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~a~K~~~~~~---~~~~~~~--------~e~~~l~~~~~h~~i~~ 77 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHV------KTGQLAAIKVMDVTE---DEEEEIK--------LEINMLKKYSHHRNIAT 77 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEc------CCCcEEEEEEEecCh---HHHHHHH--------HHHHHHHHhcCCCcEEE
Confidence 467999999999999999999964 467899999986432 2222333 788998888 7999999
Q ss_pred eeeEEEe------CCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCC
Q 000316 240 VLGLLKT------SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1678)
Q Consensus 240 l~~~~~~------~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 312 (1678)
+++++.. ...+|+||||+++ +|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~ 157 (282)
T cd06636 78 YYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTEN 157 (282)
T ss_pred EeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC
Confidence 9999853 4578999999985 99999986555668899999999999999999999999999999999999999
Q ss_pred CceeEEEEecCCccc
Q 000316 313 CWSWLYICDKPLVGF 327 (1678)
Q Consensus 313 g~~~lKL~DFGlA~~ 327 (1678)
+ .+||+|||+++.
T Consensus 158 ~--~~~l~dfg~~~~ 170 (282)
T cd06636 158 A--EVKLVDFGVSAQ 170 (282)
T ss_pred C--CEEEeeCcchhh
Confidence 9 899999999874
No 229
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.95 E-value=4.2e-28 Score=293.24 Aligned_cols=145 Identities=19% Similarity=0.163 Sum_probs=121.2
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 238 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV 238 (1678)
..+.|++...+|.|+|+.|..+.+. .+.+..++|++.+...... +|+.++... +||||+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~------~t~~~~~vkii~~~~~~~~--------------~e~~~~~~~~~h~niv 379 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESS------PTDQEPAVKIISKRADDNQ--------------DEIPISLLVRDHPNIV 379 (612)
T ss_pred cchhhccccccCCCCccceeeeecc------ccccchhheeccccccccc--------------cccchhhhhcCCCcce
Confidence 3668999999999999999999965 5778899999987533222 677665555 799999
Q ss_pred ceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEe-cCCCcee
Q 000316 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL-TDSCWSW 316 (1678)
Q Consensus 239 ~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl-~~~g~~~ 316 (1678)
++.+++.++.+.|+|||.+.| .+.+.+.. ...+. .++..|++||+.|+.|||++|||||||||+|||+ ++.+ +
T Consensus 380 ~~~~v~~~~~~~~~v~e~l~g~ell~ri~~--~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g--~ 454 (612)
T KOG0603|consen 380 KSHDVYEDGKEIYLVMELLDGGELLRRIRS--KPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAG--H 454 (612)
T ss_pred eecceecCCceeeeeehhccccHHHHHHHh--cchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCC--c
Confidence 999999999999999999996 66666662 33333 7888899999999999999999999999999999 5777 8
Q ss_pred EEEEecCCcccCC
Q 000316 317 LYICDKPLVGFNS 329 (1678)
Q Consensus 317 lKL~DFGlA~~~~ 329 (1678)
++|+|||.++...
T Consensus 455 lrltyFG~a~~~~ 467 (612)
T KOG0603|consen 455 LRLTYFGFWSELE 467 (612)
T ss_pred EEEEEechhhhCc
Confidence 9999999998544
No 230
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.95 E-value=5.5e-27 Score=279.04 Aligned_cols=146 Identities=16% Similarity=0.140 Sum_probs=127.8
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++.+.||.|+||.||+|.+. .++..+|+|.+...... ....+. +|+.+++.++||||+++
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~------~~~~~v~iK~~~~~~~~--~~~~~~--------~e~~~l~~l~h~~iv~~ 81 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDV------ATGQEVAIKQINLQKQP--KKELII--------NEILVMKELKNPNIVNF 81 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEc------CCCcEEEEEEEecccCc--hHHHHH--------HHHHHHHhcCCCceeee
Confidence 567999999999999999999864 46789999998653222 222333 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++.+...+.+|+||||+++ +|..++. ...+++..+..++.|++.||+|||++||+||||||+||+++.++ .+||
T Consensus 82 ~~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~--~~kl 156 (296)
T cd06655 82 LDSFLVGDELFVVMEYLAGGSLTDVVT---ETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDG--SVKL 156 (296)
T ss_pred eeeEecCceEEEEEEecCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEE
Confidence 9999999999999999985 9999887 33589999999999999999999999999999999999999998 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||+++.
T Consensus 157 ~dfg~~~~ 164 (296)
T cd06655 157 TDFGFCAQ 164 (296)
T ss_pred ccCccchh
Confidence 99999873
No 231
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.95 E-value=1.4e-27 Score=288.32 Aligned_cols=143 Identities=17% Similarity=0.224 Sum_probs=122.6
Q ss_pred eeeeee--CcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEE
Q 000316 168 AFIGIC--SYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLK 245 (1678)
Q Consensus 168 ~~IG~G--~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~ 245 (1678)
..||+| +||+||+|++. .++..||+|++..........+.+. +|+.+++.++||||++++++|.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~e~~~~~~l~h~niv~~~~~~~ 69 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHT------PTGTLVTVRITDLENCTEEHLKALQ--------NEVVLSHFFRHPNIMTSWTVFT 69 (328)
T ss_pred HHhCCcccCceeEEEEEEc------CCCcEEEEEEeccccCCHHHHHHHH--------HHHHHHHhCCCCCcceEeeeEe
Confidence 456766 99999999964 5789999999876544433333333 8999999999999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
.++..++||||+++ +|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++ .+|++|||.
T Consensus 70 ~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~--~~~~~~~~~ 147 (328)
T cd08226 70 TGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDG--LVSLSGLSH 147 (328)
T ss_pred cCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCC--cEEEechHH
Confidence 99999999999995 999999854445689999999999999999999999999999999999999988 899999976
Q ss_pred cc
Q 000316 325 VG 326 (1678)
Q Consensus 325 A~ 326 (1678)
+.
T Consensus 148 ~~ 149 (328)
T cd08226 148 LY 149 (328)
T ss_pred Hh
Confidence 54
No 232
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.95 E-value=2.7e-27 Score=286.89 Aligned_cols=149 Identities=25% Similarity=0.387 Sum_probs=127.3
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 238 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV 238 (1678)
..++|++.+.||+|+||.||+|.+. .++..+|+|.+............+. +|+.+++.+ +||||+
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~vK~~~~~~~~~~~~~~~~--------~E~~~l~~l~~h~ni~ 70 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDR------RTKEVVALKKIFDAFRNATDAQRTF--------REIMFLQELGDHPNIV 70 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEc------CCCeEEEEEeeccccCcchhhhhhh--------HHHHHHHHhcCCCCcc
Confidence 4678999999999999999999864 4678899998865322222222333 899999999 999999
Q ss_pred ceeeEEEeC--CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCcee
Q 000316 239 PVLGLLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1678)
Q Consensus 239 ~l~~~~~~~--~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~ 316 (1678)
++++++... ..+|+||||++++|.+++.. . .+++..++.++.||+.||.|||++||+||||||+||+++.++ .
T Consensus 71 ~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~--~ 145 (337)
T cd07852 71 KLLNVIKAENDKDIYLVFEYMETDLHAVIRA--N-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDC--R 145 (337)
T ss_pred ceeeeeccCCCceEEEEecccccCHHHHHhc--C-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--c
Confidence 999998754 36899999999999999872 2 678888999999999999999999999999999999999999 8
Q ss_pred EEEEecCCccc
Q 000316 317 LYICDKPLVGF 327 (1678)
Q Consensus 317 lKL~DFGlA~~ 327 (1678)
+||+|||+++.
T Consensus 146 ~kl~d~g~~~~ 156 (337)
T cd07852 146 VKLADFGLARS 156 (337)
T ss_pred EEEeeccchhc
Confidence 99999999874
No 233
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.95 E-value=8.3e-26 Score=303.25 Aligned_cols=277 Identities=15% Similarity=0.232 Sum_probs=219.9
Q ss_pred cccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCCCc---------eeEEeccccccEEEEEEecC-CCEEEEE
Q 000316 1278 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS---------ILSSIRAHHGALRSVAVGQD-ECTVFTA 1345 (1678)
Q Consensus 1278 ~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~~~---------~l~tl~gH~~~V~svafspd-g~~LaSg 1345 (1678)
.+.+|++.|++ |+|+|.+ +|+||.|++|+||+.... ....+. +...|.+++|++. +.+|++|
T Consensus 478 ~~~~~~~~V~~i~fs~dg~~-----latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~ 551 (793)
T PLN00181 478 DLLNSSNLVCAIGFDRDGEF-----FATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASS 551 (793)
T ss_pred cccCCCCcEEEEEECCCCCE-----EEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEE
Confidence 34568999986 9999987 999999999999997521 233344 3568999999875 6889999
Q ss_pred ecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecC-CCCcEE--eCCCcEEEEECCCCceeEEecccCccccccCCC
Q 000316 1346 GIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLS-SSGRIA--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSP 1422 (1678)
Q Consensus 1346 S~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~-~~~~la--S~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~ 1422 (1678)
+. ||+|++||+.+++.+..+.+|.+.|++++|++ ++..++ +.|++|++||++++.++..+..+
T Consensus 552 ~~----Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~---------- 617 (793)
T PLN00181 552 NF----EGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK---------- 617 (793)
T ss_pred eC----CCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC----------
Confidence 86 99999999999999999999999999999997 456664 44999999999998887666421
Q ss_pred CCCccccccccccccccCCCCCCeEEeeecCCceeEeEee-cCCCEEEEEECCCcEEEEECCCCe-eeEEeeCCCCcccC
Q 000316 1423 SSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHI-ECVERLVVGIGNGSLRFIDINQGQ-KLHLWRGEPTELGF 1500 (1678)
Q Consensus 1423 s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~s-p~g~~Lasgs~DgtVrlWDl~tg~-~l~~l~~~~~~v~~ 1500 (1678)
.. +.++.++ +++..+++|+.||+|++||+++++ .+..+.+ |
T Consensus 618 ---------------------~~----------v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~------h 660 (793)
T PLN00181 618 ---------------------AN----------ICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIG------H 660 (793)
T ss_pred ---------------------CC----------eEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecC------C
Confidence 11 3444453 468899999999999999998765 4555554 4
Q ss_pred CCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCC------CcEEEEEeccCCCeEEEE-cCCCCEEEEEeC
Q 000316 1501 PSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRS------GNVIASWRAHDGYVTKLA-APEDHLLVSSSL 1573 (1678)
Q Consensus 1501 ~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~t------g~~i~~l~gH~~~V~sva-spdg~~LaSgS~ 1573 (1678)
...|.+++|. ++.++++|+.|++|++||+++ ++++..+.+|...++.+. ++++++|++|+.
T Consensus 661 ~~~V~~v~f~------------~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~ 728 (793)
T PLN00181 661 SKTVSYVRFV------------DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSE 728 (793)
T ss_pred CCCEEEEEEe------------CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeC
Confidence 4567888873 346899999999999999985 367889999999999999 899999999999
Q ss_pred CCcEEEEEcCCCCCCCCe-----------EeecCCCCEE--EEEecCCEEEEEeCCC-eEEEec
Q 000316 1574 DKTLRIWDLRRNWPSQPT-----------VFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSL 1623 (1678)
Q Consensus 1574 DgtI~IWDl~~~~~~~~~-----------~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl 1623 (1678)
|++|++|+.....+...+ ....|...|. +|++++..|++|+.|+ |+||++
T Consensus 729 D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 729 TNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM 792 (793)
T ss_pred CCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence 999999998654211111 1233445577 4899999999999999 999996
No 234
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.95 E-value=4.5e-27 Score=279.74 Aligned_cols=150 Identities=20% Similarity=0.190 Sum_probs=128.6
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.++ .++..||+|.++...........+. +|+.+++.++||||+++
T Consensus 6 ~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~v~iK~~~~~~~~~~~~~~~~--------~e~~~~~~l~h~~i~~~ 71 (302)
T cd07864 6 VDKFDIIGQIGEGTYGQVYKARDK------DTGELVALKKVRLDNEKEGFPITAI--------REIKILRQLNHRNIVNL 71 (302)
T ss_pred hhhhheeeeecccCCEEEEEEEEC------CCCcEEEEEEEeecccccCchHHHH--------HHHHHHHhCCCCCeeee
Confidence 678999999999999999999964 4678899999875432222222222 89999999999999999
Q ss_pred eeEEEeCC----------eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEec
Q 000316 241 LGLLKTSG----------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 310 (1678)
Q Consensus 241 ~~~~~~~~----------~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~ 310 (1678)
++++.+.. .+++||||+++++.+.+.. ....+++..++.++.||+.||.|||++||+||||||+||+++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~ 150 (302)
T cd07864 72 KEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLES-GLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLN 150 (302)
T ss_pred eheecCcchhhhccccCCcEEEEEcccCccHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC
Confidence 99987655 7999999999988888873 344689999999999999999999999999999999999999
Q ss_pred CCCceeEEEEecCCccc
Q 000316 311 DSCWSWLYICDKPLVGF 327 (1678)
Q Consensus 311 ~~g~~~lKL~DFGlA~~ 327 (1678)
+++ .+||+|||+++.
T Consensus 151 ~~~--~~kl~dfg~~~~ 165 (302)
T cd07864 151 NKG--QIKLADFGLARL 165 (302)
T ss_pred CCC--cEEeCccccccc
Confidence 999 899999999874
No 235
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=2.4e-28 Score=291.82 Aligned_cols=209 Identities=19% Similarity=0.204 Sum_probs=167.7
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
.+++++.||+|.||+|++|..+ ....||+|.++...... ..|+ +|+++|++|+|+|||++++
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~-------~~~~vavk~ik~~~m~~---~~f~--------~Ea~iMk~L~H~~lV~l~g 268 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWN-------GSTKVAVKTIKEGSMSP---EAFL--------REAQIMKKLRHEKLVKLYG 268 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEc-------CCCcccceEEeccccCh---hHHH--------HHHHHHHhCcccCeEEEEE
Confidence 5778999999999999999953 33478999997754333 3455 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++..++.+|||||||+ |+|.++|+...+..+...+...++.|||+|++||+++++|||||...|||++++. .+||+|
T Consensus 269 V~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~--~vKIsD 346 (468)
T KOG0197|consen 269 VCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDL--VVKISD 346 (468)
T ss_pred EEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCc--eEEEcc
Confidence 9999889999999999 8999999975677899999999999999999999999999999999999999999 999999
Q ss_pred cCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCC-CCCCcC
Q 000316 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR-WGDYTF 400 (1678)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs-~~dl~q 400 (1678)
|||||...........+. .-...|.|||.+....++.++|+|++|.+. +|..+. ||. |..+++
T Consensus 347 FGLAr~~~d~~Y~~~~~~----------kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL-~E~fT~-----G~~py~~msn 410 (468)
T KOG0197|consen 347 FGLARLIGDDEYTASEGG----------KFPIKWTAPEALNYGKFSSKSDVWSFGVLL-WELFTY-----GRVPYPGMSN 410 (468)
T ss_pred cccccccCCCceeecCCC----------CCCceecCHHHHhhCCcccccceeehhhhH-HHHhcc-----CCCCCCCCCH
Confidence 999995443222211111 124569999999999999999999999664 333333 554 344444
Q ss_pred CcccceE
Q 000316 401 HMVMPWV 407 (1678)
Q Consensus 401 ~pv~pwv 407 (1678)
.-|+.-|
T Consensus 411 ~ev~~~l 417 (468)
T KOG0197|consen 411 EEVLELL 417 (468)
T ss_pred HHHHHHH
Confidence 4444333
No 236
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.95 E-value=6.3e-27 Score=276.19 Aligned_cols=149 Identities=17% Similarity=0.169 Sum_probs=125.3
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 238 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV 238 (1678)
..++|++++.||+|+||.||+|++. .++..+|+|.+...... ..++. +|+.+++.+ +||||+
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~------~~~~~~~ik~~~~~~~~---~~~~~--------~e~~~l~~l~~h~~i~ 78 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNK------KNGSKAAVKILDPIHDI---DEEIE--------AEYNILKALSDHPNVV 78 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEEC------CCCceeEEEeeccccch---HHHHH--------HHHHHHHHHhcCCCee
Confidence 4678999999999999999999964 46788999987542211 12233 799999999 699999
Q ss_pred ceeeEEE-----eCCeEEEeccCCCC-CHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEec
Q 000316 239 PVLGLLK-----TSGLITSVIPKTPY-TLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 310 (1678)
Q Consensus 239 ~l~~~~~-----~~~~~~lVmEy~~g-~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~ 310 (1678)
++++++. .++.+++||||++| +|.+++.. .....+++..++.++.|++.||.|||+++|+||||||+||+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~ 158 (286)
T cd06638 79 KFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLT 158 (286)
T ss_pred eeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEEC
Confidence 9999884 34579999999985 99998763 2345688999999999999999999999999999999999999
Q ss_pred CCCceeEEEEecCCccc
Q 000316 311 DSCWSWLYICDKPLVGF 327 (1678)
Q Consensus 311 ~~g~~~lKL~DFGlA~~ 327 (1678)
.++ .+||+|||+++.
T Consensus 159 ~~~--~~kl~dfg~~~~ 173 (286)
T cd06638 159 TEG--GVKLVDFGVSAQ 173 (286)
T ss_pred CCC--CEEEccCCceee
Confidence 999 899999999874
No 237
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.95 E-value=5.8e-27 Score=271.46 Aligned_cols=150 Identities=17% Similarity=0.128 Sum_probs=128.9
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.+.||+|+||.||++.++ .++..+|+|.+............+. +|+.+++.++||||+++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~E~~~l~~~~h~~i~~~~~ 66 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAK------SDSEHCVIKEIDLTKMPVKEKEASK--------KEVILLAKMKHPNIVTFFA 66 (257)
T ss_pred CceEEEEecCCCcceEEEEEEc------CCCceEEEEEeeHhhccchhhHHHH--------HHHHHHHhCCCCChhhhhh
Confidence 5899999999999999999965 4678899999876433333333333 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
.+...+..++|+||+++ +|.+++.......+++..++.++.|++.||.|||+++|+||||||+||++++++. .+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~-~~~l~d 145 (257)
T cd08225 67 SFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGM-VAKLGD 145 (257)
T ss_pred eeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCC-eEEecc
Confidence 99999999999999985 9999998544556899999999999999999999999999999999999998862 579999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||.+..
T Consensus 146 ~~~~~~ 151 (257)
T cd08225 146 FGIARQ 151 (257)
T ss_pred cccchh
Confidence 998863
No 238
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.95 E-value=1.1e-26 Score=275.20 Aligned_cols=148 Identities=20% Similarity=0.247 Sum_probs=125.6
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
.++|++.+.||+|+||.||+|.+. .+++.+|+|.+...... ...+. +|+.+++.+ +||||++
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~------~~~~~~aik~~~~~~~~---~~~~~--------~e~~~l~~l~~h~ni~~ 83 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNK------KDGSLAAVKILDPISDV---DEEIE--------AEYNILQSLPNHPNVVK 83 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEEC------CCCCEEEEEEecccccH---HHHHH--------HHHHHHHHhcCCCCeEE
Confidence 568999999999999999999964 46889999998653211 12222 789999988 8999999
Q ss_pred eeeEEEeC-----CeEEEeccCCCC-CHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecC
Q 000316 240 VLGLLKTS-----GLITSVIPKTPY-TLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1678)
Q Consensus 240 l~~~~~~~-----~~~~lVmEy~~g-~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~ 311 (1678)
+++++... +..|+||||++| +|.++++. .....+++..++.++.|++.||+|||++||+||||||+||+++.
T Consensus 84 ~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~ 163 (291)
T cd06639 84 FYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTT 163 (291)
T ss_pred EEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC
Confidence 99998754 368999999985 99998863 23456899999999999999999999999999999999999999
Q ss_pred CCceeEEEEecCCccc
Q 000316 312 SCWSWLYICDKPLVGF 327 (1678)
Q Consensus 312 ~g~~~lKL~DFGlA~~ 327 (1678)
++ .+||+|||+++.
T Consensus 164 ~~--~~kl~dfg~~~~ 177 (291)
T cd06639 164 EG--GVKLVDFGVSAQ 177 (291)
T ss_pred CC--CEEEeecccchh
Confidence 98 899999999874
No 239
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.95 E-value=1.3e-27 Score=293.42 Aligned_cols=203 Identities=17% Similarity=0.205 Sum_probs=162.9
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|+++ .++..+|+|.+.+.........+.+. +|+.+++.++||||+++
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~-------~e~~i~~~~~hp~iv~~ 108 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHK------STRKVYAMKLLSKFEMIKRSDSAFFW-------EERDIMAFANSPWVVQL 108 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEC------CCCcEEEEEEEEHHHhhhhHHHHHHH-------HHHHHHHhCCCCCCCeE
Confidence 578999999999999999999965 57889999998653222222222232 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+++.+|+||||++| +|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 109 ~~~~~~~~~~~lv~Ey~~gg~L~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~--~ikL 183 (371)
T cd05622 109 FYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG--HLKL 183 (371)
T ss_pred EEEEEcCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCC--CEEE
Confidence 9999999999999999984 99999873 3578999999999999999999999999999999999999999 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCccccccccccccc----ccccccccccCccchhhhHhhhccccC
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD----WHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~----y~~~~d~W~~G~isnfeyL~~ln~~aG 392 (1678)
+|||+++........ . .....||+.|||||++.+.. |+.++|+|+.|++. |++++...++.+
T Consensus 184 ~DfG~a~~~~~~~~~----~------~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvil-yell~G~~Pf~~ 249 (371)
T cd05622 184 ADFGTCMKMNKEGMV----R------CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL-YEMLVGDTPFYA 249 (371)
T ss_pred EeCCceeEcCcCCcc----c------ccCcccCccccCHHHHhccCCCccCCCccceeehhHHH-HHHHhCCCCCCC
Confidence 999999854321100 0 11234899999999987543 78899999999665 555544444443
No 240
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.95 E-value=1.1e-26 Score=277.83 Aligned_cols=150 Identities=18% Similarity=0.157 Sum_probs=129.9
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH-HHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
...|++.+.||+|+||.||+|.+. .++..||+|.+........ ...++. +|+.+++.++||||++
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~------~~~~~v~iK~~~~~~~~~~~~~~~~~--------~Ei~~l~~l~h~niv~ 79 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDV------RTNEVVAIKKMSYSGKQSNEKWQDII--------KEVRFLQQLRHPNTIE 79 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEc------CCCcEEEEEEEeccccCcHHHHHHHH--------HHHHHHHhCCCCCEEE
Confidence 456999999999999999999964 4678999999865433322 223343 8999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
+++++.+++..|+||||++|++.+++.. ....+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||
T Consensus 80 ~~~~~~~~~~~~lv~e~~~g~l~~~~~~-~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~--~~kL 156 (307)
T cd06607 80 YKGCYLREHTAWLVMEYCLGSASDILEV-HKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPG--TVKL 156 (307)
T ss_pred EEEEEEeCCeEEEEHHhhCCCHHHHHHH-cccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCC--CEEE
Confidence 9999999999999999999999888864 344689999999999999999999999999999999999999999 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||+++.
T Consensus 157 ~dfg~~~~ 164 (307)
T cd06607 157 ADFGSASL 164 (307)
T ss_pred eecCccee
Confidence 99998863
No 241
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.95 E-value=1.2e-27 Score=291.10 Aligned_cols=201 Identities=15% Similarity=0.171 Sum_probs=162.1
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++++.||+|+||.||+|++. .++..||+|++.+...........+. +|+.+|..++||||++++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~~~~~~i~~~~ 67 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDK------DTGQVYAMKVLRKSDMIKRNQIAHVR-------AERDILADADSPWIVKLY 67 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEEC------CCCCEEEEEEEEHHHHhhccHHHHHH-------HHHHHHHhcCCCCccchh
Confidence 47999999999999999999965 46889999999764332222222232 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++.+++.+|+||||++| +|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~--~~kL~ 143 (350)
T cd05573 68 YSFQDEEHLYLVMEYMPGGDLMNLLIR--KDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADG--HIKLA 143 (350)
T ss_pred hheecCCeEEEEEcCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEEee
Confidence 999999999999999985 99999983 46789999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccc------------------cCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 321 DKPLVGFNSIADWCTI------------------PTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~------------------~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||+++.......... ..............||+.|+|||++.+..++.++|+|+.|++.
T Consensus 144 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il 220 (350)
T cd05573 144 DFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVIL 220 (350)
T ss_pred cCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhh
Confidence 9999986442210000 0000000112234589999999999999999999999999664
No 242
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.95 E-value=8.8e-27 Score=281.49 Aligned_cols=148 Identities=21% Similarity=0.341 Sum_probs=127.3
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++++.||+|+||.||+|.+. .++..+|+|.+.+..........+. +|+.+++.++||||++
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~hpniv~ 73 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQ------LTGQNVAIKKIMKPFSTPVLAKRTY--------RELKLLKHLRHENIIS 73 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEEC------CCCCEEEEEEecccccccchhHHHH--------HHHHHHHhcCCCCeee
Confidence 4678999999999999999999965 4788999998865322222223333 8999999999999999
Q ss_pred eeeEEEe-CCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKT-SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~-~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
++++|.. ....|+||||++++|.++++ ...+++..+..++.|++.||.|||++||+||||||+|||++.++ .+|
T Consensus 74 ~~~~~~~~~~~~~lv~e~~~~~L~~~~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~--~~~ 148 (328)
T cd07856 74 LSDIFISPLEDIYFVTELLGTDLHRLLT---SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENC--DLK 148 (328)
T ss_pred EeeeEecCCCcEEEEeehhccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCC--CEE
Confidence 9999976 55789999999889998887 34578888999999999999999999999999999999999998 899
Q ss_pred EEecCCcc
Q 000316 319 ICDKPLVG 326 (1678)
Q Consensus 319 L~DFGlA~ 326 (1678)
|+|||+++
T Consensus 149 l~dfg~~~ 156 (328)
T cd07856 149 ICDFGLAR 156 (328)
T ss_pred eCcccccc
Confidence 99999886
No 243
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.95 E-value=1.6e-26 Score=273.60 Aligned_cols=155 Identities=17% Similarity=0.134 Sum_probs=127.4
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|..+-. .....+..||+|.+.... .......+. +|+.+++.++||||+++
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~-~~~~~~~~vavK~~~~~~-~~~~~~~~~--------~e~~~l~~l~~~~i~~~ 74 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDI-IKGEAETRVAVKTVNESA-SLRERIEFL--------NEASVMKGFTCHHVVRL 74 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEecc-CCCCcceEEEEEECCCcC-CHHHHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 46899999999999999999975421 112346789999986532 222223343 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecC
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSP--------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~--------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~ 311 (1678)
++++.+.+..|+||||++ |+|.++++... ....+...+..++.||+.||.|||++||+||||||+|||++.
T Consensus 75 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~ 154 (288)
T cd05061 75 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH 154 (288)
T ss_pred EEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcC
Confidence 999999999999999998 59999997421 123466788899999999999999999999999999999999
Q ss_pred CCceeEEEEecCCccc
Q 000316 312 SCWSWLYICDKPLVGF 327 (1678)
Q Consensus 312 ~g~~~lKL~DFGlA~~ 327 (1678)
++ .+||+|||+++.
T Consensus 155 ~~--~~~L~Dfg~~~~ 168 (288)
T cd05061 155 DF--TVKIGDFGMTRD 168 (288)
T ss_pred CC--cEEECcCCcccc
Confidence 98 899999999873
No 244
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.95 E-value=1.5e-26 Score=271.00 Aligned_cols=151 Identities=21% Similarity=0.211 Sum_probs=126.5
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH----HHHHHHhcCCCchhHHHhhccCCCCccc
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE----SKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~----~~~~l~~~~~~~~~Ei~iL~~l~HpNIV 238 (1678)
+|.+.+.||+|+||.||+|.+. .++..+|+|.+......... .....+. ..+|+.+++.++||||+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~------~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~----~~~e~~~l~~l~h~~i~ 71 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNV------TTGEMMAVKQVELPATIAGRHDSRQKDMVKA----LRSEIETLKDLDHLNIV 71 (272)
T ss_pred ceeecceecccCceEEEEEeec------CCCceeeeeeeechhhhhcccchHHHHHHHH----HHHHHHHHHhcCCCCcc
Confidence 5889999999999999999854 46789999988642211111 1111110 11899999999999999
Q ss_pred ceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 239 ~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++++++...+..++||||++| +|.++++. ...+++..++.++.||+.||.|||++|++||||||+||+++.++ .+
T Consensus 72 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~--~~ 147 (272)
T cd06629 72 QYLGFETTEEYLSIFLEYVPGGSIGSCLRT--YGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADG--IC 147 (272)
T ss_pred eEEEEeccCCceEEEEecCCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCC--eE
Confidence 999999999999999999985 99999983 46789999999999999999999999999999999999999998 89
Q ss_pred EEEecCCccc
Q 000316 318 YICDKPLVGF 327 (1678)
Q Consensus 318 KL~DFGlA~~ 327 (1678)
||+|||+++.
T Consensus 148 ~l~d~~~~~~ 157 (272)
T cd06629 148 KISDFGISKK 157 (272)
T ss_pred EEeecccccc
Confidence 9999999863
No 245
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.95 E-value=9.2e-27 Score=273.19 Aligned_cols=147 Identities=16% Similarity=0.203 Sum_probs=128.8
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++.+.||.|+||.||+|.+. .++..+|+|.+.... .......+. +|+.+++.++||||++++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 65 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDK------RTNQVVAIKVIDLEE-AEDEIEDIQ--------QEIQFLSQCRSPYITKYY 65 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEEC------CCCeEEEEEEeeccc-cchHHHHHH--------HHHHHHHHcCCCCeeeee
Confidence 46899999999999999999964 468899999987542 222233333 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++.++..+|+|+||+++ +|.+++.. ..+++..++.++.|++.||.|||+++|+||||||+||++++++ .++|+
T Consensus 66 ~~~~~~~~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~--~~~l~ 140 (274)
T cd06609 66 GSFLKGSKLWIIMEYCGGGSCLDLLKP---GKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEG--DVKLA 140 (274)
T ss_pred EEEEECCeEEEEEEeeCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC--CEEEc
Confidence 999999999999999985 99999983 2789999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccC
Q 000316 321 DKPLVGFN 328 (1678)
Q Consensus 321 DFGlA~~~ 328 (1678)
|||+++..
T Consensus 141 d~g~~~~~ 148 (274)
T cd06609 141 DFGVSGQL 148 (274)
T ss_pred ccccceee
Confidence 99998743
No 246
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.95 E-value=6.5e-27 Score=275.24 Aligned_cols=142 Identities=16% Similarity=0.100 Sum_probs=122.4
Q ss_pred eeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH-HHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeCC
Q 000316 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 248 (1678)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~~ 248 (1678)
||+|+||+||+|.+. .+++.+|+|.+.+....... ...+. +|+++|+.++||||+++++++...+
T Consensus 1 lg~g~~g~vy~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~~~~~~~ 66 (277)
T cd05577 1 LGKGGFGEVCACQVK------ATGKMYACKKLDKKRLKKRKGEQMAL--------NEKKILEKVSSRFIVSLAYAFETKD 66 (277)
T ss_pred CCCCCceeEEEEEEc------CCCcEEEEEEEehhhhhhhhhhHHHH--------HHHHHHHhCCCCCEeeeeeEEecCC
Confidence 699999999999864 46889999998754322222 22223 8999999999999999999999999
Q ss_pred eEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCccc
Q 000316 249 LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1678)
Q Consensus 249 ~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~ 327 (1678)
..|+||||++| +|.+++.......+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+|||+++.
T Consensus 67 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~--~~~l~dfg~~~~ 144 (277)
T cd05577 67 DLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHG--NVRISDLGLAVE 144 (277)
T ss_pred eEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC--CEEEccCcchhh
Confidence 99999999995 999999854445789999999999999999999999999999999999999999 899999998863
No 247
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.95 E-value=6.1e-27 Score=272.02 Aligned_cols=147 Identities=21% Similarity=0.257 Sum_probs=129.5
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh-HHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
+|++.+.||.|+||.||+|.+. .++..+|+|.+.+..... ...+.+. +|+++++.++||||++++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 66 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKR------DTKKMFAMKYMNKQKCVEKGSVRNVL--------NERRILQELNHPFLVNLW 66 (258)
T ss_pred CceEEEEeccCCCceEEEEEEc------cCCcEEEEEEEehhhhcchhHHHHHH--------HHHHHHHhCCCCChHHHH
Confidence 5899999999999999999964 467889999997644333 2333443 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++.++...++||||+.| +|.+++.. ...+++..+..++.||++||.|||++||+|+||||+||++++++ .+||+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~--~~~l~ 142 (258)
T cd05578 67 YSFQDEENMYLVVDLLLGGDLRYHLSQ--KVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQG--HVHIT 142 (258)
T ss_pred HhhcCCCeEEEEEeCCCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCC--CEEEe
Confidence 999999999999999986 99999983 35789999999999999999999999999999999999999999 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||++..
T Consensus 143 d~~~~~~ 149 (258)
T cd05578 143 DFNIATK 149 (258)
T ss_pred ecccccc
Confidence 9998863
No 248
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.95 E-value=4.5e-27 Score=273.87 Aligned_cols=147 Identities=19% Similarity=0.242 Sum_probs=129.4
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|+..+.||+|+||.||+|.++ .++..+|+|.+..... .....++. +|+++++.++||||++++
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~-~~~~~~~~--------~e~~~l~~~~~~~i~~~~ 65 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHR------PTGKIMAVKTIRLEIN-EAIQKQIL--------RELDILHKCNSPYIVGFY 65 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEc------CCCcEEEEEEEecccC-hHHHHHHH--------HHHHHHHHCCCCchhhhh
Confidence 36888999999999999999965 4678999999876432 23334444 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCCeEecCCCceeEEE
Q 000316 242 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
+.+..+..+++||||++ ++|.+++...+ ..+++..+..++.|++.||.|||+ .|++||||||+||+++.++ .+||
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~--~~~l 142 (265)
T cd06605 66 GAFYNNGDISICMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRG--QIKL 142 (265)
T ss_pred eeeecCCEEEEEEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCC--CEEE
Confidence 99999999999999999 59999998432 678999999999999999999999 9999999999999999998 8999
Q ss_pred EecCCcc
Q 000316 320 CDKPLVG 326 (1678)
Q Consensus 320 ~DFGlA~ 326 (1678)
+|||.+.
T Consensus 143 ~d~g~~~ 149 (265)
T cd06605 143 CDFGVSG 149 (265)
T ss_pred eecccch
Confidence 9999886
No 249
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.95 E-value=1.3e-26 Score=270.94 Aligned_cols=148 Identities=17% Similarity=0.219 Sum_probs=127.4
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
.++|++.+.||+|+||.||+|.++ .++..+++|.+..... ...++. +|+.+++.+ +||||++
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~---~~~~~~--------~e~~~l~~~~~h~~i~~ 67 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHK------KTGQLVAIKIMDIIED---EEEEIK--------EEYNILRKYSNHPNIAT 67 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEEC------CCCcEEEEEEEecCch---hHHHHH--------HHHHHHHHhcCCCChhe
Confidence 578999999999999999999964 3578899999865322 223333 899999999 7999999
Q ss_pred eeeEEEeCC------eEEEeccCCCC-CHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEec
Q 000316 240 VLGLLKTSG------LITSVIPKTPY-TLENILQFSP--NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 310 (1678)
Q Consensus 240 l~~~~~~~~------~~~lVmEy~~g-~L~~~l~~~~--~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~ 310 (1678)
+++++.... .+|+||||+++ +|.+++.... ...+++..++.++.|++.||.|||++||+||||+|+||+++
T Consensus 68 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~ 147 (275)
T cd06608 68 FYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLT 147 (275)
T ss_pred EEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEc
Confidence 999997644 58999999995 9999987433 46789999999999999999999999999999999999999
Q ss_pred CCCceeEEEEecCCccc
Q 000316 311 DSCWSWLYICDKPLVGF 327 (1678)
Q Consensus 311 ~~g~~~lKL~DFGlA~~ 327 (1678)
.++ .+||+|||++..
T Consensus 148 ~~~--~~~l~d~~~~~~ 162 (275)
T cd06608 148 KNA--EVKLVDFGVSAQ 162 (275)
T ss_pred cCC--eEEECCCcccee
Confidence 998 899999999874
No 250
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.2e-26 Score=270.17 Aligned_cols=147 Identities=20% Similarity=0.170 Sum_probs=125.7
Q ss_pred cCCCCccccccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhh
Q 000316 150 NHSGRFSCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVP 229 (1678)
Q Consensus 150 ~~~~~~~~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL 229 (1678)
-|+.+++-.....+|.+.++||-|-|++||+|.|. ...+.||+|+.+...... .+++.||++|
T Consensus 66 YHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDt------q~~r~VAlKVvKSAqhYt-----------EaAlDEIklL 128 (590)
T KOG1290|consen 66 YHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDT------QNKRYVALKVVKSAQHYT-----------EAALDEIKLL 128 (590)
T ss_pred CceeeccccccCceEEEEEeccccccceeEEEeec------cCCeEEEEEEEehhhHHH-----------HHHHHHHHHH
Confidence 35666666666789999999999999999999976 577899999986532222 2455999999
Q ss_pred ccCC-----C---CcccceeeEEEeC----CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CC
Q 000316 230 GCLR-----H---PNVAPVLGLLKTS----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LG 296 (1678)
Q Consensus 230 ~~l~-----H---pNIV~l~~~~~~~----~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~g 296 (1678)
++++ | ..||+|++.|... .++|||+|++..+|..+|.+...+.++...++.|++||+.||.|||. .|
T Consensus 129 ~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecg 208 (590)
T KOG1290|consen 129 QQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECG 208 (590)
T ss_pred HHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9984 3 3699999999864 48999999999999999998888889999999999999999999998 69
Q ss_pred ceecCCCCCCeEecCCC
Q 000316 297 IAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 297 IiHRDLKP~NILl~~~g 313 (1678)
|||-||||+|||+..+.
T Consensus 209 IIHTDlKPENvLl~~~e 225 (590)
T KOG1290|consen 209 IIHTDLKPENVLLCSTE 225 (590)
T ss_pred ccccCCCcceeeeeccc
Confidence 99999999999998764
No 251
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.95 E-value=1.8e-26 Score=267.37 Aligned_cols=147 Identities=18% Similarity=0.216 Sum_probs=127.3
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcC---hHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKAS---GQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~---~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
+|+..+.||+|+||.||+|.+. .++..+++|.+...... .+....+. +|+.+++.++||||++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~ 66 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNL------DDGDFFAVKEVSLADDGQTGQEAVKQLE--------QEIALLSKLQHPNIVQ 66 (258)
T ss_pred CccccceeeecCCceEEEEEEc------CCCcEEEEEEEEEccccccchHHHHHHH--------HHHHHHHhcCCCCchh
Confidence 4788899999999999999864 46788999998654322 12223333 8999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
+++++.++..+|+||||++| +|.+++. +...+++..+..++.||+.||.|||++||+||||||+||+++.++ .+|
T Consensus 67 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~--~~k 142 (258)
T cd06632 67 YLGTEREEDNLYIFLELVPGGSLAKLLK--KYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNG--VVK 142 (258)
T ss_pred eeeeEecCCeEEEEEEecCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEE
Confidence 99999999999999999995 9999998 345688999999999999999999999999999999999999998 899
Q ss_pred EEecCCccc
Q 000316 319 ICDKPLVGF 327 (1678)
Q Consensus 319 L~DFGlA~~ 327 (1678)
|+|||+++.
T Consensus 143 l~d~~~~~~ 151 (258)
T cd06632 143 LADFGMAKQ 151 (258)
T ss_pred EccCcccee
Confidence 999999874
No 252
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.95 E-value=1.1e-26 Score=273.65 Aligned_cols=144 Identities=15% Similarity=0.114 Sum_probs=117.9
Q ss_pred eeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH-HHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeC
Q 000316 169 FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1678)
Q Consensus 169 ~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~ 247 (1678)
.||+|+||.||+|++. .+++.||+|.+.+....... ...+... ..++..++...||||+++++++.+.
T Consensus 1 ~ig~g~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~~~~~~~~~ 69 (278)
T cd05606 1 IIGRGGFGEVYGCRKA------DTGKMYAMKCLDKKRIKMKQGETLALNE-----RIMLSLVSTGDCPFIVCMSYAFHTP 69 (278)
T ss_pred CcccCCCeEEEEEEEe------cCCCEEEEEEeeccccccchhHHHHHHH-----HHHHHHHHhCCCCcEeeeeeeeecC
Confidence 4899999999999864 46789999998764332211 1112210 0234455566899999999999999
Q ss_pred CeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCcc
Q 000316 248 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1678)
Q Consensus 248 ~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~ 326 (1678)
+..|+||||++| +|.+++. ....+++..++.++.|++.||.|||+++|+||||||+||+++.++ .+||+|||+++
T Consensus 70 ~~~~~v~e~~~g~~L~~~l~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~--~~kl~dfg~~~ 145 (278)
T cd05606 70 DKLSFILDLMNGGDLHYHLS--QHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVRISDLGLAC 145 (278)
T ss_pred CEEEEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCC--CEEEccCcCcc
Confidence 999999999995 9998887 456789999999999999999999999999999999999999998 89999999986
Q ss_pred c
Q 000316 327 F 327 (1678)
Q Consensus 327 ~ 327 (1678)
.
T Consensus 146 ~ 146 (278)
T cd05606 146 D 146 (278)
T ss_pred c
Confidence 3
No 253
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.95 E-value=1.2e-26 Score=268.65 Aligned_cols=146 Identities=18% Similarity=0.213 Sum_probs=128.7
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|... .++..+++|.+..... ..++. +|+++++.++||||+++
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~----~~~~~--------~e~~~~~~l~~~~i~~~ 63 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHK------ETGQVVAIKVVPVEED----LQEII--------KEISILKQCDSPYIVKY 63 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEc------CCCcEEEEEEeecHHH----HHHHH--------HHHHHHHhCCCCcEeee
Confidence 357999999999999999999964 3578899999865321 33343 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++.+.++..+|+++||+++ +|.+++.. ....+++..++.++.|++.||.|||+.||+||||+|+||+++.++ .+||
T Consensus 64 ~~~~~~~~~~~l~~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~--~~~l 140 (256)
T cd06612 64 YGSYFKNTDLWIVMEYCGAGSVSDIMKI-TNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEG--QAKL 140 (256)
T ss_pred eeeeecCCcEEEEEecCCCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCC--cEEE
Confidence 9999999999999999995 99999973 345689999999999999999999999999999999999999999 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||++..
T Consensus 141 ~dfg~~~~ 148 (256)
T cd06612 141 ADFGVSGQ 148 (256)
T ss_pred cccccchh
Confidence 99999874
No 254
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.95 E-value=2.6e-26 Score=266.68 Aligned_cols=149 Identities=18% Similarity=0.213 Sum_probs=128.1
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++++.||.|+||.||+|.+. .++..+|+|.+...........++. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRK------SDGKILVWKEIDYGNMTEKEKQQLV--------SEVNILRELKHPNIVRYYD 66 (265)
T ss_pred CceeeeeeccCCCeEEEEeeec------CCCCEEEEEEEecccCCHHHHHHHH--------HHHHHHHhcCCCccceeee
Confidence 5899999999999999999865 4678899999876544444444444 8999999999999999999
Q ss_pred EEEe--CCeEEEeccCCCC-CHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHH-----hCCceecCCCCCCeEecCC
Q 000316 243 LLKT--SGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLH-----SLGIAHRSVCPSNVLLTDS 312 (1678)
Q Consensus 243 ~~~~--~~~~~lVmEy~~g-~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH-----~~gIiHRDLKP~NILl~~~ 312 (1678)
.+.. +...+++|||+++ +|.+++... ....+++..++.++.||+.||.||| +.+|+||||||+||+++.+
T Consensus 67 ~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~ 146 (265)
T cd08217 67 RIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDAN 146 (265)
T ss_pred eeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecC
Confidence 8864 4578999999985 999999742 2456899999999999999999999 9999999999999999999
Q ss_pred CceeEEEEecCCccc
Q 000316 313 CWSWLYICDKPLVGF 327 (1678)
Q Consensus 313 g~~~lKL~DFGlA~~ 327 (1678)
+ .+||+|||+++.
T Consensus 147 ~--~~kl~d~g~~~~ 159 (265)
T cd08217 147 N--NVKLGDFGLAKI 159 (265)
T ss_pred C--CEEEeccccccc
Confidence 8 899999999874
No 255
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.95 E-value=1.6e-26 Score=272.44 Aligned_cols=148 Identities=24% Similarity=0.246 Sum_probs=124.7
Q ss_pred eeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC---CCCcccce
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL---RHPNVAPV 240 (1678)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l---~HpNIV~l 240 (1678)
|++.+.||+|+||.||+|+++ .++..+|+|.+............+. +|+.+++.+ +||||+++
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~h~~i~~~ 66 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDL------NTGRFVALKKVRVPLSEEGIPLSTL--------REIALLKQLESFEHPNIVRL 66 (287)
T ss_pred CeEEEEecccCceEEEEEEEC------CCCCEEEEEEeccccccchhhhhHH--------HHHHHHHHhhccCCCCcceE
Confidence 688999999999999999964 3578899999975433222122222 677766655 69999999
Q ss_pred eeEEEeCCe-----EEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCce
Q 000316 241 LGLLKTSGL-----ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1678)
Q Consensus 241 ~~~~~~~~~-----~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~ 315 (1678)
++++...+. ++++|||++++|.+++.......+++..++.++.|++.||.|||++||+||||||+||+++.++
T Consensus 67 ~~~~~~~~~~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~-- 144 (287)
T cd07838 67 LDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDG-- 144 (287)
T ss_pred EEEEeeccCCCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCC--
Confidence 999998776 9999999999999998854445689999999999999999999999999999999999999998
Q ss_pred eEEEEecCCccc
Q 000316 316 WLYICDKPLVGF 327 (1678)
Q Consensus 316 ~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 145 ~~~l~dfg~~~~ 156 (287)
T cd07838 145 QVKIADFGLARI 156 (287)
T ss_pred CEEEeccCccee
Confidence 899999998863
No 256
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.95 E-value=3.5e-27 Score=285.31 Aligned_cols=192 Identities=15% Similarity=0.100 Sum_probs=157.4
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++++.||+|+||.||++++. .++..||+|.+.+.........+.++ +|+.++..++|+||++++
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~~~~~~i~~l~ 67 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMK------HTERIYAMKILNKWEMLKRAETACFR-------EERNVLVNGDCQWITTLH 67 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEEC------CCCCEEEEEEEeHHHHHhhHHHHHHH-------HHHHHHHhCCCCCEeeEE
Confidence 47999999999999999999965 46788999998753222222222232 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++.+++..|+||||++| +|.+++.. ....+++..++.++.|++.||+|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~Ey~~gg~L~~~l~~-~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~--~~kl~ 144 (331)
T cd05624 68 YAFQDENYLYLVMDYYVGGDLLTLLSK-FEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNG--HIRLA 144 (331)
T ss_pred EEEEcCCEEEEEEeCCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCC--CEEEE
Confidence 999999999999999984 99999984 245689999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCccccccccccc-----ccccccccccccCccc
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-----MDWHSQFNRWWRGELS 379 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-----~~y~~~~d~W~~G~is 379 (1678)
|||+++........ ......||+.|||||++.+ ..++.++|+|+.|++.
T Consensus 145 DfG~a~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil 198 (331)
T cd05624 145 DFGSCLKMNQDGTV----------QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCM 198 (331)
T ss_pred eccceeeccCCCce----------eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhh
Confidence 99999754321100 0111247899999998875 4678899999999664
No 257
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.95 E-value=7.8e-26 Score=254.02 Aligned_cols=291 Identities=16% Similarity=0.197 Sum_probs=241.8
Q ss_pred ccccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCC
Q 000316 1275 ATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGF 1351 (1678)
Q Consensus 1275 ~~~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~ 1351 (1678)
+.-.+.||++.|.+ ||.||.+ ||||+-+|.|+||+.. +.....+.+--+.|-.+.|+|.+..|+.|+.
T Consensus 98 ~~~eltgHKDSVt~~~Fshdgtl-----LATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~---- 168 (399)
T KOG0296|consen 98 FAGELTGHKDSVTCCSFSHDGTL-----LATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGST---- 168 (399)
T ss_pred ceeEecCCCCceEEEEEccCceE-----EEecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecC----
Confidence 67789999999996 9999998 9999999999999988 6667777667788999999999999999998
Q ss_pred CCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCcccc
Q 000316 1352 KGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKI 1429 (1678)
Q Consensus 1352 DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~ 1429 (1678)
||.|.+|.+.++...+.+.||..++++=.|.|+|+++ +..||+|++||+.+|+++..+.....
T Consensus 169 DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~--------------- 233 (399)
T KOG0296|consen 169 DGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEG--------------- 233 (399)
T ss_pred CCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEeccccc---------------
Confidence 9999999999988888999999999999999999998 44599999999999999887764210
Q ss_pred ccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCC--CcccCCCcceEE
Q 000316 1430 NTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEP--TELGFPSLVSAI 1507 (1678)
Q Consensus 1430 ~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~--~~v~~~~~V~sv 1507 (1678)
...+|+.++..+..++.|+.++.+++-...+|+.+....+.. ........+.||
T Consensus 234 ------------------------~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esv 289 (399)
T KOG0296|consen 234 ------------------------LELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESV 289 (399)
T ss_pred ------------------------CcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhh
Confidence 113455666678899999999999999999999887776411 111233445555
Q ss_pred EeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEEcCCCCEEEEEeCCCcEEEEEcCCCCC
Q 000316 1508 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWP 1587 (1678)
Q Consensus 1508 a~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~ 1587 (1678)
.+.+..+ .=.+.|+|+-||+|.|||+.+.+....+. |..+|+.+.+-+..+|++++.||+|++||.++|
T Consensus 290 e~~~~ss--------~lpL~A~G~vdG~i~iyD~a~~~~R~~c~-he~~V~~l~w~~t~~l~t~c~~g~v~~wDaRtG-- 358 (399)
T KOG0296|consen 290 ESIPSSS--------KLPLAACGSVDGTIAIYDLAASTLRHICE-HEDGVTKLKWLNTDYLLTACANGKVRQWDARTG-- 358 (399)
T ss_pred hhccccc--------ccchhhcccccceEEEEecccchhheecc-CCCceEEEEEcCcchheeeccCceEEeeecccc--
Confidence 5443221 22578999999999999999887777666 889999999444789999999999999999999
Q ss_pred CCCeEeecCCCCEEE--EEecCCEEEEEeCCC-eEEEecC
Q 000316 1588 SQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1588 ~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~ 1624 (1678)
..+.++.||...|.+ ++|++++++|+|+|+ .+||.+.
T Consensus 359 ~l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 359 QLKFTYTGHQMGILDFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred ceEEEEecCchheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence 778899999999995 899999999999999 9999863
No 258
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.95 E-value=3.3e-26 Score=267.66 Aligned_cols=143 Identities=22% Similarity=0.262 Sum_probs=121.0
Q ss_pred EeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEE
Q 000316 166 PIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLK 245 (1678)
Q Consensus 166 ~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~ 245 (1678)
....||+|+||.||+|++. .++..+|+|.+... .......+. +|+.+++.++||||+++++++.
T Consensus 12 ~~~~lg~g~~g~v~~~~~~------~~~~~v~~k~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~iv~~~~~~~ 75 (268)
T cd06624 12 ERVVLGKGTYGIVYAARDL------STQVRIAIKEIPER--DSRYVQPLH--------EEIALHSYLKHRNIVQYLGSDS 75 (268)
T ss_pred ceEEEecCCceEEEEeEec------CCCcEEEEEEecCC--CHHHHHHHH--------HHHHHHHhcCCCCeeeeeeeec
Confidence 3468999999999999864 46788999988653 222333343 8999999999999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCC--CHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecC-CCceeEEEEe
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALK--SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD-SCWSWLYICD 321 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l--~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~-~g~~~lKL~D 321 (1678)
.++..++||||+++ +|.+++... ...+ ++..+..++.||+.||+|||++||+||||||+||+++. ++ .+||+|
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~--~~~l~d 152 (268)
T cd06624 76 ENGFFKIFMEQVPGGSLSALLRSK-WGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSG--VVKISD 152 (268)
T ss_pred cCCEEEEEEecCCCCCHHHHHHHh-cccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCC--eEEEec
Confidence 99999999999985 999999842 2334 78888999999999999999999999999999999986 55 899999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||++..
T Consensus 153 fg~~~~ 158 (268)
T cd06624 153 FGTSKR 158 (268)
T ss_pred chhhee
Confidence 999863
No 259
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.95 E-value=5.7e-26 Score=245.59 Aligned_cols=287 Identities=18% Similarity=0.263 Sum_probs=219.7
Q ss_pred eccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEEEEC
Q 000316 1323 IRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNS 1400 (1678)
Q Consensus 1323 l~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~ 1400 (1678)
++||..+++.|.++.+|.+|+||+. |.++.||-..+|+.+.++.||++.|++|+..-+...+ +|.|.++++||+
T Consensus 6 l~GHERplTqiKyN~eGDLlFscaK----D~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv 81 (327)
T KOG0643|consen 6 LQGHERPLTQIKYNREGDLLFSCAK----DSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDV 81 (327)
T ss_pred cccCccccceEEecCCCcEEEEecC----CCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEc
Confidence 6899999999999999999999998 9999999999999999999999999999988777777 677999999999
Q ss_pred CCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECC-----C
Q 000316 1401 QTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGN-----G 1475 (1678)
Q Consensus 1401 ~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~D-----g 1475 (1678)
.+|+++.+++... . |..+.|+.+|++++.++.+ +
T Consensus 82 ~tGk~la~~k~~~-------------------------------~----------Vk~~~F~~~gn~~l~~tD~~mg~~~ 120 (327)
T KOG0643|consen 82 ETGKQLATWKTNS-------------------------------P----------VKRVDFSFGGNLILASTDKQMGYTC 120 (327)
T ss_pred CCCcEEEEeecCC-------------------------------e----------eEEEeeccCCcEEEEEehhhcCcce
Confidence 9999998887431 2 3344455567777766543 6
Q ss_pred cEEEEECCCC-------eeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCc-EE
Q 000316 1476 SLRFIDINQG-------QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN-VI 1547 (1678)
Q Consensus 1476 tVrlWDl~tg-------~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~-~i 1547 (1678)
.|.++|++.. ++...+..+. +.++. .+|.+-+.+|++|.+||.|..||+++|+ .+
T Consensus 121 ~v~~fdi~~~~~~~~s~ep~~kI~t~~------skit~-----------a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v 183 (327)
T KOG0643|consen 121 FVSVFDIRDDSSDIDSEEPYLKIPTPD------SKITS-----------ALWGPLGETIIAGHEDGSISIYDARTGKELV 183 (327)
T ss_pred EEEEEEccCChhhhcccCceEEecCCc------cceee-----------eeecccCCEEEEecCCCcEEEEEcccCceee
Confidence 7999999843 3344443222 22333 3444677899999999999999999985 55
Q ss_pred EEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE--EEEecCCEEEEEeCCC-eEEEec
Q 000316 1548 ASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSL 1623 (1678)
Q Consensus 1548 ~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl 1623 (1678)
..-+-|...|+.+. +++..++++||.|.+-++||.++- ..+.++.. ..+|+ +++|....++.|+.-. --|-..
T Consensus 184 ~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl--~v~Kty~t-e~PvN~aaisP~~d~VilgGGqeA~dVTTT 260 (327)
T KOG0643|consen 184 DSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTL--EVLKTYTT-ERPVNTAAISPLLDHVILGGGQEAMDVTTT 260 (327)
T ss_pred echhhhccccccccccCCcceEEecccCccceeeeccce--eeEEEeee-cccccceecccccceEEecCCceeeeeeee
Confidence 66678999999999 999999999999999999999986 44445543 45677 5999888888876433 444443
Q ss_pred CCCCCCCC-cceeccceeeeeecC--CCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1624 SKSADEDG-QHRLVPQKLYMVDNG--AKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1624 ~~~~~~~g-~~~~~~~kl~~~~~g--~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
+ ...| ........++...-| .+|-++|++++|+|+|+..++|++||.||+.
T Consensus 261 ~---~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h 314 (327)
T KOG0643|consen 261 S---TRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLH 314 (327)
T ss_pred c---ccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEE
Confidence 3 1122 111112222222222 2799999999999999999999999999983
No 260
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.95 E-value=1.6e-26 Score=269.26 Aligned_cols=141 Identities=19% Similarity=0.259 Sum_probs=123.0
Q ss_pred eeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeCCe
Q 000316 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGL 249 (1678)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~~~ 249 (1678)
||.|+||.||+|++. .++..+|+|.+.+.........+.+. +|+.+++.++||||+++++.+.++..
T Consensus 1 lg~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~~-------~e~~~l~~l~h~~i~~~~~~~~~~~~ 67 (262)
T cd05572 1 LGVGGFGRVELVKVK------SKNRTFALKCVKKRHIVETGQQEHIF-------SEKEILEECNHPFIVKLYRTFKDKKY 67 (262)
T ss_pred CCCCCceEEEEEEEC------CCCcEEEEEEEehhcchhhhHHHHHH-------HHHHHHHhCCCCCEeeeeeeEEcCCc
Confidence 799999999999964 36789999999765433333333332 89999999999999999999999999
Q ss_pred EEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCccc
Q 000316 250 ITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1678)
Q Consensus 250 ~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~ 327 (1678)
+|+||||+++ +|.+++. +...+++..++.++.||+.||.|||++|++|+||||+||+++.++ .+||+|||+++.
T Consensus 68 ~~lv~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~--~~~l~df~~~~~ 142 (262)
T cd05572 68 IYMLMEYCLGGELWTILR--DRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNG--YVKLVDFGFAKK 142 (262)
T ss_pred cEEEEecCCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCC--CEEEeeCCcccc
Confidence 9999999985 9999998 345689999999999999999999999999999999999999998 899999999874
No 261
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.95 E-value=3.2e-28 Score=269.29 Aligned_cols=211 Identities=17% Similarity=0.210 Sum_probs=168.2
Q ss_pred CCCeeE-eeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCccc
Q 000316 161 MTALFP-IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 238 (1678)
Q Consensus 161 ~~~y~~-~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV 238 (1678)
.+-|++ .+.||+|+||.|--|.+ +.++..+|||++.+. ..+...+.+ ||++++..+ .|+||+
T Consensus 76 ~d~YkLt~e~LGeGAyasVqtcv~------i~t~~EYAVKiidKq--~gHsR~Rvf--------REVe~f~~Cqgh~nil 139 (463)
T KOG0607|consen 76 EDMYKLTSELLGEGAYASVQTCVS------IQTGKEYAVKIIDKQ--PGHSRSRVF--------REVETFYQCQGHKNIL 139 (463)
T ss_pred HHHHHhHHHHhcCccceeeeeeee------eccchhhhhhhhhcC--CchHHHHHH--------HHHHHHHHhcCCccHH
Confidence 344555 67899999999999984 368999999999874 444434443 999999999 599999
Q ss_pred ceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc-ee
Q 000316 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-SW 316 (1678)
Q Consensus 239 ~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~-~~ 316 (1678)
+|+++|++++.+|||||.|.| .|...|. +.+.|+|.++..++++|+.||.|||.+||.||||||+|||-..... .-
T Consensus 140 qLiefFEdd~~FYLVfEKm~GGplLshI~--~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsP 217 (463)
T KOG0607|consen 140 QLIEFFEDDTRFYLVFEKMRGGPLLSHIQ--KRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSP 217 (463)
T ss_pred HHHHHhcccceEEEEEecccCchHHHHHH--HhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCc
Confidence 999999999999999999995 9999888 5778999999999999999999999999999999999999876443 46
Q ss_pred EEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc-----cccccccccccccCccchhhhHhhhcccc
Q 000316 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-----SMDWHSQFNRWWRGELSNFEYLLFLNKLA 391 (1678)
Q Consensus 317 lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-----~~~y~~~~d~W~~G~isnfeyL~~ln~~a 391 (1678)
+|||||-++............+++. ..+.| |+..|||||+.. ...|++.+|.|+.|.|. |-+|..+.+|.
T Consensus 218 vKiCDfDLgSg~k~~~~~spastP~---L~tPv-GSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIl-YImLsGYpPFv 292 (463)
T KOG0607|consen 218 VKICDFDLGSGIKLNNDCSPASTPE---LLTPV-GSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVIL-YIMLSGYPPFV 292 (463)
T ss_pred eeeeccccccccccCCCCCCCCCcc---ccCcc-cchhhcchhHHhhhccccccccccccHHHHHHHH-HHHHhCCCCcc
Confidence 8999999987544333322223332 23333 678999999763 45699999999999886 66666667776
Q ss_pred CCC
Q 000316 392 GRR 394 (1678)
Q Consensus 392 GRs 394 (1678)
|+-
T Consensus 293 G~C 295 (463)
T KOG0607|consen 293 GHC 295 (463)
T ss_pred Ccc
Confidence 654
No 262
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.95 E-value=3.5e-27 Score=272.89 Aligned_cols=279 Identities=15% Similarity=0.248 Sum_probs=225.3
Q ss_pred cccccCCCCceEe--ecC-CCCCCCCCeEEEEeCCCCEEEEeCC--CceeEEeccccccEEEEEEecCCCEEEEEecCCC
Q 000316 1276 TSNLMKCEPWFWF--PTP-AASWDGPDFLGRVGGLKDESPWKIK--ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPG 1350 (1678)
Q Consensus 1276 ~~~l~gH~~~V~~--fSp-dg~~~~~~~LasgS~D~~v~lWd~~--~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~ 1350 (1678)
..++.||+.-|.+ |.| .+.+ |++||.|+.|+||++- +.+++++.||..+|.+++|+.+|..++|+|
T Consensus 207 ~~~~~gH~kgvsai~~fp~~~hL-----lLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~s---- 277 (503)
T KOG0282|consen 207 SHNLSGHTKGVSAIQWFPKKGHL-----LLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSAS---- 277 (503)
T ss_pred eeeccCCccccchhhhccceeeE-----EEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeee----
Confidence 5678899999987 666 6665 9999999999999976 789999999999999999999999999999
Q ss_pred CCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE---EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCcc
Q 000316 1351 FKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI---ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSIS 1427 (1678)
Q Consensus 1351 ~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l---aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~ 1427 (1678)
||++|++||++||+++..+. -...+++|.|+|++..+ +..|+.|+.||+++|+.++.+..|-
T Consensus 278 fD~~lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hL-------------- 342 (503)
T KOG0282|consen 278 FDRFLKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHL-------------- 342 (503)
T ss_pred cceeeeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhh--------------
Confidence 69999999999999999886 45677999999998543 4449999999999999887777542
Q ss_pred ccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEE
Q 000316 1428 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAI 1507 (1678)
Q Consensus 1428 ~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sv 1507 (1678)
+.|..+.| -++|..+++.+.|+++++|+.+.+-.+....... .....|+
T Consensus 343 ----------------g~i~~i~F----------~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~-----~hsmP~~ 391 (503)
T KOG0282|consen 343 ----------------GAILDITF----------VDEGRRFISSSDDKSVRIWENRIPVPIKNIADPE-----MHTMPCL 391 (503)
T ss_pred ----------------hheeeeEE----------ccCCceEeeeccCccEEEEEcCCCccchhhcchh-----hccCcce
Confidence 23444444 4569999999999999999998876654332111 1112233
Q ss_pred EeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCC---cEEEEEeccCC--CeEEEE-cCCCCEEEEEeCCCcEEEEE
Q 000316 1508 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG---NVIASWRAHDG--YVTKLA-APEDHLLVSSSLDKTLRIWD 1581 (1678)
Q Consensus 1508 a~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg---~~i~~l~gH~~--~V~sva-spdg~~LaSgS~DgtI~IWD 1581 (1678)
+..|+++++++=+.|+.|.++.+... ..-+.++||.- .-..|. +|||++|+||+.||.+.+||
T Consensus 392 -----------~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wd 460 (503)
T KOG0282|consen 392 -----------TLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWD 460 (503)
T ss_pred -----------ecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEee
Confidence 33477789999999999999987643 33456788864 344555 99999999999999999999
Q ss_pred cCCCCCCCCeEeecCCCCEEE--EEecC-CEEEEEeCCC-eEEEe
Q 000316 1582 LRRNWPSQPTVFKGHTNGISG--FSVWG-QDVISISNNK-IGLSS 1622 (1678)
Q Consensus 1582 l~~~~~~~~~~l~gH~~~V~a--fSpdg-~~LaSgs~D~-I~vwd 1622 (1678)
.++. +.+..++.|...+.. |.|.. ..||||+.|| |++|+
T Consensus 461 wkt~--kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 461 WKTT--KLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred chhh--hhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 9987 566789999888884 77764 5689999999 99996
No 263
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.95 E-value=4.8e-26 Score=273.19 Aligned_cols=149 Identities=17% Similarity=0.177 Sum_probs=128.7
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH-HHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
.+.|...++||+|+||.||+|++. .++..+++|.+......... ...+. +|+.+++.++||||++
T Consensus 20 ~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~v~ik~~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~ 85 (313)
T cd06633 20 EEIFVGLHEIGHGSFGAVYFATNS------HTNEVVAVKKMSYSGKQTNEKWQDII--------KEVKFLQQLKHPNTIE 85 (313)
T ss_pred HHHhhcceeeccCCCeEEEEEEEC------CCCcEEEEEEEeccccCchHHHHHHH--------HHHHHHHhCCCCCCcc
Confidence 445788899999999999999864 46789999998754332222 23333 8999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
+++++.+....|+||||+.|+|.+++.. ....+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||
T Consensus 86 ~~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~--~~kL 162 (313)
T cd06633 86 YKGCYLKEHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPG--QVKL 162 (313)
T ss_pred EEEEEEeCCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCC--CEEE
Confidence 9999999999999999999999888874 345688999999999999999999999999999999999999998 8999
Q ss_pred EecCCcc
Q 000316 320 CDKPLVG 326 (1678)
Q Consensus 320 ~DFGlA~ 326 (1678)
+|||++.
T Consensus 163 ~dfg~~~ 169 (313)
T cd06633 163 ADFGSAS 169 (313)
T ss_pred eecCCCc
Confidence 9999875
No 264
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.94 E-value=2.7e-26 Score=270.16 Aligned_cols=147 Identities=26% Similarity=0.300 Sum_probs=128.0
Q ss_pred eeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeE
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1678)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~ 243 (1678)
|++.+.||+|+||.||+|.+. .++..+|+|.+............+. +|+.+++.++||||++++++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~------~~~~~~~~K~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~~ 66 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNK------KTGELVALKKIRMENEKEGFPITAI--------REIKLLQKLRHPNIVRLKEI 66 (287)
T ss_pred CeeeEEeccCCCeEEEEEEEC------CCCeEEEEEEEecccccccchHHHH--------HHHHHHHhccCCCeeeheee
Confidence 688999999999999999964 4578999999986532222223333 89999999999999999999
Q ss_pred EEeC--CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 244 LKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 244 ~~~~--~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
+... +..++||||++++|.+++.. ....+++..++.++.||+.||+|||++|++|+||||+||++++++ .+||+|
T Consensus 67 ~~~~~~~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~--~~~l~d 143 (287)
T cd07840 67 VTSKGKGSIYMVFEYMDHDLTGLLDS-PEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDG--VLKLAD 143 (287)
T ss_pred EecCCCCcEEEEeccccccHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCC--CEEEcc
Confidence 9988 89999999999999999873 235789999999999999999999999999999999999999999 899999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+++.
T Consensus 144 ~g~~~~ 149 (287)
T cd07840 144 FGLARP 149 (287)
T ss_pred ccceee
Confidence 999874
No 265
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.94 E-value=1.1e-26 Score=276.68 Aligned_cols=143 Identities=18% Similarity=0.167 Sum_probs=123.4
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
-|.....||+|+||.||+|.+. .++..||+|.+...... ....+. +|+.+++.++||||+++++
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~------~~~~~v~iK~~~~~~~~--~~~~~~--------~e~~~l~~l~hp~i~~~~~ 85 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREK------HSGRQVAVKMMDLRKQQ--RRELLF--------NEVVIMRDYQHQNVVEMYK 85 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEc------CCCCEEEEEEEEecccc--hHHHHH--------HHHHHHHhCCCCchhhhhh
Confidence 3455668999999999999864 46788999998653222 222333 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
.+..++..|+||||+++ +|.+++. ...+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 86 ~~~~~~~~~iv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~--~~kL~d 160 (297)
T cd06659 86 SYLVGEELWVLMEFLQGGALTDIVS---QTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDG--RVKLSD 160 (297)
T ss_pred heeeCCeEEEEEecCCCCCHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCC--cEEEee
Confidence 99999999999999995 8988776 34588999999999999999999999999999999999999999 899999
Q ss_pred cCCcc
Q 000316 322 KPLVG 326 (1678)
Q Consensus 322 FGlA~ 326 (1678)
||+++
T Consensus 161 fg~~~ 165 (297)
T cd06659 161 FGFCA 165 (297)
T ss_pred chhHh
Confidence 99986
No 266
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.94 E-value=5.4e-26 Score=264.47 Aligned_cols=147 Identities=23% Similarity=0.255 Sum_probs=129.4
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.+.||+|+||.||++.+. .++..+++|.+............+. +|+.+++.++|+||+++++
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~~~~l~~~~i~~~~~ 66 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNL------DTGELMAVKEIRIQDNDPKTIKEIA--------DEMKVLELLKHPNLVKYYG 66 (264)
T ss_pred CceeeeEeecCCCcEEEEEEEC------CCCcEEEEEEEECcccchHHHHHHH--------HHHHHHHhCCCCChhheee
Confidence 5899999999999999999854 4678999999976544322333443 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
.+.+.+.+++|+||+++ +|.+++. ....+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~--~~kl~d 142 (264)
T cd06626 67 VEVHREKVYIFMEYCSGGTLEELLE--HGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNG--VIKLGD 142 (264)
T ss_pred eEecCCEEEEEEecCCCCcHHHHHh--hcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEEcc
Confidence 99999999999999995 9999998 345678999999999999999999999999999999999999988 899999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||++..
T Consensus 143 ~g~~~~ 148 (264)
T cd06626 143 FGCAVK 148 (264)
T ss_pred cccccc
Confidence 999874
No 267
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.94 E-value=2e-25 Score=268.05 Aligned_cols=351 Identities=16% Similarity=0.198 Sum_probs=253.2
Q ss_pred CceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeC
Q 000316 1284 PWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWEL 1360 (1678)
Q Consensus 1284 ~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl 1360 (1678)
..|.+ .++|... ||.|=.||.|++|+.. +..+-++.||..+|+++.|...|..|+|||. |+.|.+||+
T Consensus 66 ~evt~l~~~~d~l~-----lAVGYaDGsVqif~~~s~~~~~tfngHK~AVt~l~fd~~G~rlaSGsk----Dt~IIvwDl 136 (888)
T KOG0306|consen 66 AEVTCLRSSDDILL-----LAVGYADGSVQIFSLESEEILITFNGHKAAVTTLKFDKIGTRLASGSK----DTDIIVWDL 136 (888)
T ss_pred ceEEEeeccCCcce-----EEEEecCceEEeeccCCCceeeeecccccceEEEEEcccCceEeecCC----CccEEEEEe
Confidence 35555 3355554 9999999999999988 6788899999999999999999999999998 999999999
Q ss_pred CCCeEEEEEecCCccEEEEeecCCCCcEEeC--CCcEEEEECCCCceeEEecccCcccc---------------------
Q 000316 1361 TRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSL--------------------- 1417 (1678)
Q Consensus 1361 ~tg~~l~~l~gH~~~V~sV~fs~~~~~laS~--DgtVrIWD~~tg~~~~~l~~~~~~~~--------------------- 1417 (1678)
-...-+..++||.+.|+..-|..+...++|+ |++||+||+.+..|..+.-.|.....
T Consensus 137 V~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~~~lvt~~~dse~~v~ 216 (888)
T KOG0306|consen 137 VGEEGLFRLRGHKDSITQALFLNGDSFLVSVSKDSMIKFWDLETQHCFETHVDHRGEIWALVLDEKLLVTAGTDSELKVW 216 (888)
T ss_pred ccceeeEEeecchHHHhHHhccCCCeEEEEeccCceEEEEecccceeeeEEecccceEEEEEEecceEEEEecCCceEEE
Confidence 8777788899999999999987766666443 99999999998776555433211100
Q ss_pred ---------------------------------ccCCCCCCcccccccc--------------------------cccc-
Q 000316 1418 ---------------------------------HGGSPSSSISKINTDQ--------------------------VGML- 1437 (1678)
Q Consensus 1418 ---------------------------------~~~s~s~~~~~~~~~~--------------------------~~~~- 1437 (1678)
....++....+..+.+ ....
T Consensus 217 ~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t 296 (888)
T KOG0306|consen 217 ELAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAET 296 (888)
T ss_pred EeecccccccccccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccc
Confidence 0000000000000000 0000
Q ss_pred -----c-------------cCCCCCCeE-------------------------E----------------ee--ecCCce
Q 000316 1438 -----N-------------SNTLSSGIL-------------------------S----------------TA--FDGNLY 1456 (1678)
Q Consensus 1438 -----~-------------~~~~s~~v~-------------------------s----------------v~--f~~~~v 1456 (1678)
. ....+..+. + +. .+..-|
T Consensus 297 ~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dV 376 (888)
T KOG0306|consen 297 EENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDV 376 (888)
T ss_pred cccccchhhhHHHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhhe
Confidence 0 000000000 1 11 122236
Q ss_pred eEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeE
Q 000316 1457 TCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQC 1536 (1678)
Q Consensus 1457 t~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I 1536 (1678)
..++++.+...+++|+ .+.+++|+..+.++++++.. ..+.+.+|+ |.++++++|..+|.+
T Consensus 377 Rsl~vS~d~~~~~Sga-~~SikiWn~~t~kciRTi~~--------~y~l~~~Fv-----------pgd~~Iv~G~k~Gel 436 (888)
T KOG0306|consen 377 RSLCVSSDSILLASGA-GESIKIWNRDTLKCIRTITC--------GYILASKFV-----------PGDRYIVLGTKNGEL 436 (888)
T ss_pred eEEEeecCceeeeecC-CCcEEEEEccCcceeEEecc--------ccEEEEEec-----------CCCceEEEeccCCce
Confidence 7777777666666655 47899999999999999874 246666765 444799999999999
Q ss_pred EEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCC---CCCeEeecC-------CCCEEE--E
Q 000316 1537 RLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWP---SQPTVFKGH-------TNGISG--F 1603 (1678)
Q Consensus 1537 ~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~---~~~~~l~gH-------~~~V~a--f 1603 (1678)
.+||+.+...+.+.++|++.+++++ .||+..+++||.|++|++||..-... .+...+.-+ .+.|.| +
T Consensus 437 ~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~ 516 (888)
T KOG0306|consen 437 QVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSV 516 (888)
T ss_pred EEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEE
Confidence 9999999999999999999999999 99999999999999999999642110 111112211 334553 9
Q ss_pred EecCCEEEEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1604 SVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1604 Spdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
||||++||.+=-|. ++||-+.. .+++-..- +|.=+|.+++.+||+++++|||.|.+|++|
T Consensus 517 Spdgk~LaVsLLdnTVkVyflDt------------lKFflsLY--GHkLPV~smDIS~DSklivTgSADKnVKiW 577 (888)
T KOG0306|consen 517 SPDGKLLAVSLLDNTVKVYFLDT------------LKFFLSLY--GHKLPVLSMDISPDSKLIVTGSADKNVKIW 577 (888)
T ss_pred cCCCcEEEEEeccCeEEEEEecc------------eeeeeeec--ccccceeEEeccCCcCeEEeccCCCceEEe
Confidence 99999999998777 99998751 13333333 489999999999999999999999999999
No 268
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.94 E-value=5e-27 Score=283.68 Aligned_cols=192 Identities=14% Similarity=0.178 Sum_probs=159.0
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++.+.||+|+||.||+|+++ .++..||+|.+++.........+.+. +|+.+++.++||||++++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~i~~~~~~~~i~~~~ 67 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREK------ATGDIYAMKVMKKSVLLAQETVSFFE-------EERDILSISNSPWIPQLQ 67 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH-------HHHHHHHhCCCCCCccee
Confidence 46999999999999999999965 46889999999764332232333333 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++.+++.+|+||||++ |+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~--~~kL~ 144 (330)
T cd05601 68 YAFQDKDNLYLVMEYQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTG--HIKLA 144 (330)
T ss_pred eEEecCCeEEEEECCCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCC--CEEec
Confidence 99999999999999998 4999999842 35689999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc------cccccccccccccCccc
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ------SMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~------~~~y~~~~d~W~~G~is 379 (1678)
|||+++........ ......||+.|+|||++. ...++.++|+|+.|+|.
T Consensus 145 Dfg~a~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il 199 (330)
T cd05601 145 DFGSAARLTANKMV----------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIA 199 (330)
T ss_pred cCCCCeECCCCCce----------eeecccCCccccCHHHhccccccccCCCCCcceeeccccee
Confidence 99999854321110 011124788999999986 55678899999999664
No 269
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.94 E-value=1e-26 Score=276.07 Aligned_cols=145 Identities=19% Similarity=0.181 Sum_probs=124.6
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
+.|.....||+|+||.||++.+. .++..||||.+.... ......+. +|+.+++.++||||++++
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~------~~~~~vaiK~~~~~~--~~~~~~~~--------~e~~~l~~l~h~~ii~~~ 85 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEK------HTGKQVAVKKMDLRK--QQRRELLF--------NEVVIMRDYHHENVVDMY 85 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEEC------CCCCEEEEEEEecch--HHHHHHHH--------HHHHHHHhCCCCcHHHHH
Confidence 45666788999999999999864 467889999986422 22222333 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+.+...+..|+||||+++ +|.+++. ...+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||+
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~--~~kL~ 160 (292)
T cd06658 86 NSYLVGDELWVVMEFLEGGALTDIVT---HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDG--RIKLS 160 (292)
T ss_pred HheecCCeEEEEEeCCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC--CEEEc
Confidence 999999999999999996 8888876 34578999999999999999999999999999999999999998 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||++..
T Consensus 161 dfg~~~~ 167 (292)
T cd06658 161 DFGFCAQ 167 (292)
T ss_pred cCcchhh
Confidence 9999863
No 270
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.94 E-value=2.3e-26 Score=270.54 Aligned_cols=146 Identities=17% Similarity=0.202 Sum_probs=127.5
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
..|+.+++||.|+||.||+|.+. .++..+|+|.+.... .......+. +|+.+++.++||||++++
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~------~~~~~vaiK~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 68 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDN------RTQQVVAIKIIDLEE-AEDEIEDIQ--------QEITVLSQCDSPYVTKYY 68 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEc------cCCEEEEEEEEeccc-cHHHHHHHH--------HHHHHHHhCCCCCEeeEE
Confidence 45888999999999999999864 467889999987532 223333444 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++.++...|+||||++| +|.+++. ...+++..+..++.|++.||+|||+++++|+||||+||+++.++ .++|+
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~L~~~i~---~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~--~~~l~ 143 (277)
T cd06640 69 GSYLKGTKLWIIMEYLGGGSALDLLR---AGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQG--DVKLA 143 (277)
T ss_pred EEEEECCEEEEEEecCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCC--CEEEc
Confidence 999999999999999985 9999987 34578999999999999999999999999999999999999998 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||++..
T Consensus 144 dfg~~~~ 150 (277)
T cd06640 144 DFGVAGQ 150 (277)
T ss_pred cccccee
Confidence 9999863
No 271
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.94 E-value=2.8e-26 Score=269.35 Aligned_cols=145 Identities=16% Similarity=0.281 Sum_probs=126.0
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC---CCcccc
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR---HPNVAP 239 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~---HpNIV~ 239 (1678)
.|++++.||+|+||.||+|.+. .++..+|+|.+.... ......++. +|+.+++.++ ||||++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~------~~~~~~~iK~~~~~~-~~~~~~~~~--------~e~~~l~~l~~~~~~~vi~ 66 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHV------PTGRVVALKIINLDT-PDDDVSDIQ--------REVALLSQLRQSQPPNITK 66 (277)
T ss_pred hhhhhhheeccCCceEEEEEEc------CCCcEEEEEEecCCC-CchhHHHHH--------HHHHHHHHhccCCCCCeee
Confidence 4888999999999999999964 467899999986532 222333343 8999998886 999999
Q ss_pred eeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
+++++..+...|+||||++| +|.++++. ..+++..+..++.|++.||.|||++||+||||||+||+++.++ .+|
T Consensus 67 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~--~~~ 141 (277)
T cd06917 67 YYGSYLKGPRLWIIMEYAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTG--NVK 141 (277)
T ss_pred EeeeeeeCCEEEEEEecCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCC--CEE
Confidence 99999999999999999985 99999872 3688999999999999999999999999999999999999988 899
Q ss_pred EEecCCccc
Q 000316 319 ICDKPLVGF 327 (1678)
Q Consensus 319 L~DFGlA~~ 327 (1678)
|+|||++..
T Consensus 142 l~dfg~~~~ 150 (277)
T cd06917 142 LCDFGVAAL 150 (277)
T ss_pred EccCCceee
Confidence 999999874
No 272
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.94 E-value=1.7e-26 Score=272.62 Aligned_cols=147 Identities=17% Similarity=0.211 Sum_probs=128.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||+|+||+||++.+. .++..+|+|++.... .......+. +|+++++.++||||+++
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~------~~~~~~a~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~i~~~ 68 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHI------PTGTVMAKKVVHIGA-KSSVRKQIL--------RELQIMHECRSPYIVSF 68 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEc------CCCcEEEEEEEEecC-cchHHHHHH--------HHHHHHHHcCCCCcceE
Confidence 357999999999999999999964 467899999986532 222233444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCCeEecCCCceeEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
++++...+.+++||||+++ +|.+++. ..+.++...++.++.|++.||.|||+ ++|+||||||+||+++.++ .++
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~--~~~ 144 (284)
T cd06620 69 YGAFLNENNICMCMEFMDCGSLDRIYK--KGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRG--QIK 144 (284)
T ss_pred eeeEecCCEEEEEEecCCCCCHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCC--cEE
Confidence 9999999999999999995 9999887 34568999999999999999999997 6999999999999999998 899
Q ss_pred EEecCCcc
Q 000316 319 ICDKPLVG 326 (1678)
Q Consensus 319 L~DFGlA~ 326 (1678)
|+|||+++
T Consensus 145 l~d~gl~~ 152 (284)
T cd06620 145 LCDFGVSG 152 (284)
T ss_pred EccCCccc
Confidence 99999876
No 273
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.94 E-value=6.2e-26 Score=268.46 Aligned_cols=148 Identities=19% Similarity=0.248 Sum_probs=126.3
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|+..+.||.|++|.||+|.+. .++..+|+|.+..... .....++. +|+++++.++||||++++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~~iv~~~ 65 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLK------NTGMIFALKTITTDPN-PDLQKQIL--------RELEINKSCKSPYIVKYY 65 (287)
T ss_pred CceEEEEEeccCCceEEEEEEEC------CCCeEEEEEEEecCCc-hHHHHHHH--------HHHHHHHhCCCCCeeeee
Confidence 46899999999999999999975 3678899999875422 22333444 899999999999999999
Q ss_pred eEEEeC--CeEEEeccCCCC-CHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCcee
Q 000316 242 GLLKTS--GLITSVIPKTPY-TLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1678)
Q Consensus 242 ~~~~~~--~~~~lVmEy~~g-~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~ 316 (1678)
++|.+. +.+|+||||++| +|.+++.. .....+++..+..++.||+.||.|||+.|++||||+|+||+++.++ .
T Consensus 66 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~--~ 143 (287)
T cd06621 66 GAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKG--Q 143 (287)
T ss_pred eEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCC--e
Confidence 998654 478999999985 99888753 2345688999999999999999999999999999999999999998 8
Q ss_pred EEEEecCCcc
Q 000316 317 LYICDKPLVG 326 (1678)
Q Consensus 317 lKL~DFGlA~ 326 (1678)
+||+|||++.
T Consensus 144 ~~l~dfg~~~ 153 (287)
T cd06621 144 VKLCDFGVSG 153 (287)
T ss_pred EEEeeccccc
Confidence 9999999986
No 274
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.94 E-value=1.1e-26 Score=278.31 Aligned_cols=145 Identities=19% Similarity=0.198 Sum_probs=119.8
Q ss_pred eEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEE
Q 000316 165 FPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLL 244 (1678)
Q Consensus 165 ~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~ 244 (1678)
.+.+.+|.|+++.|+++. .++..+|+|++............+. +|+.+++.++||||++++++|
T Consensus 5 ~i~~~~~~~~~v~~~~~~--------~~~~~~avK~~~~~~~~~~~~~~~~--------~Ei~~l~~l~h~~i~~~~~~~ 68 (314)
T cd08216 5 LIGKCFEDLMIVHLAKHK--------PTNTLVAVKKINLDSCSKEDLKLLQ--------QEIITSRQLQHPNILPYVTSF 68 (314)
T ss_pred hhhHhhcCCceEEEEEec--------CCCCEEEEEEEeccccchhHHHHHH--------HHHHHHHhcCCcchhhhhhee
Confidence 344455555555555443 3688999999976533344334444 899999999999999999999
Q ss_pred EeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecC
Q 000316 245 KTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1678)
Q Consensus 245 ~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFG 323 (1678)
...+..+++|||++ |+|.+++.......+++..++.+++|++.||+|||++||+||||||+||+++.++ .+||+|||
T Consensus 69 ~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~--~~kl~d~~ 146 (314)
T cd08216 69 IVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDG--KVVLSGLR 146 (314)
T ss_pred ecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCC--ceEEecCc
Confidence 99999999999999 5999999854455689999999999999999999999999999999999999998 89999999
Q ss_pred Cccc
Q 000316 324 LVGF 327 (1678)
Q Consensus 324 lA~~ 327 (1678)
.+..
T Consensus 147 ~~~~ 150 (314)
T cd08216 147 YSVS 150 (314)
T ss_pred ccee
Confidence 8863
No 275
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.94 E-value=2.5e-26 Score=269.19 Aligned_cols=143 Identities=18% Similarity=0.152 Sum_probs=117.5
Q ss_pred CCCeeEeeee--eeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcc
Q 000316 161 MTALFPIAFI--GICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNV 237 (1678)
Q Consensus 161 ~~~y~~~~~I--G~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNI 237 (1678)
.++|++.+.+ |+|+||.||++.++ .++..+|+|.+....... .|+.....+ +||||
T Consensus 13 ~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~~~k~~~~~~~~~---------------~e~~~~~~~~~h~~i 71 (267)
T PHA03390 13 LKNCEIVKKLKLIDGKFGKVSVLKHK------PTQKLFVQKIIKAKNFNA---------------IEPMVHQLMKDNPNF 71 (267)
T ss_pred HHhhccccceeecCCCceEEEEEEEc------CCCcEEEEEEEehhhcch---------------hhHHHHHHhhcCCCE
Confidence 3456666666 99999999999965 467889999986532211 122222222 69999
Q ss_pred cceeeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCcee
Q 000316 238 APVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1678)
Q Consensus 238 V~l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~ 316 (1678)
+++++.|...+..|+||||++ ++|.+++.. ...+++..++.++.|+++||.|||++||+||||||+||+++.++ ..
T Consensus 72 v~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~-~~ 148 (267)
T PHA03390 72 IKLYYSVTTLKGHVLIMDYIKDGDLFDLLKK--EGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAK-DR 148 (267)
T ss_pred EEEEEEEecCCeeEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCC-Ce
Confidence 999999999999999999998 499999983 34789999999999999999999999999999999999999876 37
Q ss_pred EEEEecCCccc
Q 000316 317 LYICDKPLVGF 327 (1678)
Q Consensus 317 lKL~DFGlA~~ 327 (1678)
+||+|||+++.
T Consensus 149 ~~l~dfg~~~~ 159 (267)
T PHA03390 149 IYLCDYGLCKI 159 (267)
T ss_pred EEEecCcccee
Confidence 99999998863
No 276
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=5.2e-28 Score=283.98 Aligned_cols=182 Identities=16% Similarity=0.183 Sum_probs=156.8
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccC-CcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEG-KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~-~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
.|.-++.||.|+||.||-|++. .+..+||||++... +...+...+.+ +|+.+|+.++|||+|.+.
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~------~n~evVAIKKMsySGKQs~EKWqDIl--------KEVrFL~~l~HPntieYk 92 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDV------RNSEVVAIKKMSYSGKQSNEKWQDIL--------KEVRFLRQLRHPNTIEYK 92 (948)
T ss_pred HHHHHHHhcCCccceeEEeecc------CccceeeeeeccccccccHHHHHHHH--------HHHHHHHhccCCCccccc
Confidence 5778999999999999999976 57889999998753 33333344444 999999999999999999
Q ss_pred eEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 242 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++|..+...|+|||||-|+-.|++.- ..+++-+-++..|..+.+.||+|||+.+.||||||..|||+++.| .|||+|
T Consensus 93 gCyLre~TaWLVMEYClGSAsDlleV-hkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g--~VKLaD 169 (948)
T KOG0577|consen 93 GCYLREHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPG--LVKLAD 169 (948)
T ss_pred ceeeccchHHHHHHHHhccHHHHHHH-HhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCC--eeeecc
Confidence 99999999999999999977777764 356788999999999999999999999999999999999999999 999999
Q ss_pred cCCcccCCCCCcccccCCCCcceeecccccCcccccccccc---cccccccccccccC
Q 000316 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRG 376 (1678)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~---~~~y~~~~d~W~~G 376 (1678)
||.|..... ...++|||+|||||++. ...|+.++|+|+.|
T Consensus 170 FGSAsi~~P---------------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLG 212 (948)
T KOG0577|consen 170 FGSASIMAP---------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 212 (948)
T ss_pred ccchhhcCc---------------hhcccCCccccchhHheeccccccCCccceeecc
Confidence 999875331 11246999999999875 56799999999999
No 277
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=6.7e-26 Score=266.93 Aligned_cols=280 Identities=18% Similarity=0.226 Sum_probs=240.3
Q ss_pred EEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEEE
Q 000316 1321 SSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVW 1398 (1678)
Q Consensus 1321 ~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIW 1398 (1678)
+++..|++.|.+|.|+|....++++- |.|.|.||+.+|...++.+.-..-+|.+..|......+ +|.|..||||
T Consensus 7 rk~~~rSdRVKsVd~HPtePw~la~L----ynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVf 82 (794)
T KOG0276|consen 7 RKFQSRSDRVKSVDFHPTEPWILAAL----YNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVF 82 (794)
T ss_pred hHhhccCCceeeeecCCCCceEEEee----ecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEE
Confidence 45566999999999999999999887 58999999999999999999999999999998887777 6679999999
Q ss_pred ECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEE
Q 000316 1399 NSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLR 1478 (1678)
Q Consensus 1399 D~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVr 1478 (1678)
+.+|++.+.+|..| ++.+.|++++|...+++++|.|-+||
T Consensus 83 nynt~ekV~~FeAH----------------------------------------~DyIR~iavHPt~P~vLtsSDDm~iK 122 (794)
T KOG0276|consen 83 NYNTGEKVKTFEAH----------------------------------------SDYIRSIAVHPTLPYVLTSSDDMTIK 122 (794)
T ss_pred ecccceeeEEeecc----------------------------------------ccceeeeeecCCCCeEEecCCccEEE
Confidence 99999999988865 34578888999999999999999999
Q ss_pred EEECCCC-eeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCe
Q 000316 1479 FIDINQG-QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYV 1557 (1678)
Q Consensus 1479 lWDl~tg-~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V 1557 (1678)
+||-..+ .+.+++.|| ...|.+|||.|. |.+.+|++|-|++|++|.+.+..+..+++||...|
T Consensus 123 lW~we~~wa~~qtfeGH------~HyVMqv~fnPk----------D~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGV 186 (794)
T KOG0276|consen 123 LWDWENEWACEQTFEGH------EHYVMQVAFNPK----------DPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGV 186 (794)
T ss_pred EeeccCceeeeeEEcCc------ceEEEEEEecCC----------CccceeeeeccccEEEEEcCCCCCceeeeccccCc
Confidence 9998764 677788865 556899999763 44899999999999999999999999999999999
Q ss_pred EEEE-cC--CCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEE--EEecCCEEEEEeCCC-eEEEecCCCCCCCC
Q 000316 1558 TKLA-AP--EDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDG 1631 (1678)
Q Consensus 1558 ~sva-sp--dg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g 1631 (1678)
++|. .+ |..+|+||+.|.+|+|||.++. .++.++.||+..|++ |.|.-..++|||.|| +++|+-..-
T Consensus 187 N~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk--~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty----- 259 (794)
T KOG0276|consen 187 NCVDYYTGGDKPYLISGADDLTIKVWDYQTK--SCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTY----- 259 (794)
T ss_pred ceEEeccCCCcceEEecCCCceEEEeecchH--HHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecCcce-----
Confidence 9999 43 3359999999999999999998 788999999999994 888889999999999 999995311
Q ss_pred cceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEE
Q 000316 1632 QHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRL 1676 (1678)
Q Consensus 1632 ~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrI 1676 (1678)
...++.. -..+.|++|+-.+.++.+++|.++|.|.+
T Consensus 260 ----~lE~tLn-----~gleRvW~I~~~k~~~~i~vG~Deg~i~v 295 (794)
T KOG0276|consen 260 ----KLEKTLN-----YGLERVWCIAAHKGDGKIAVGFDEGSVTV 295 (794)
T ss_pred ----ehhhhhh-----cCCceEEEEeecCCCCeEEEeccCCcEEE
Confidence 1111111 12457999999999999999999998754
No 278
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=8.5e-28 Score=265.89 Aligned_cols=208 Identities=18% Similarity=0.179 Sum_probs=178.7
Q ss_pred cccccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CC
Q 000316 156 SCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RH 234 (1678)
Q Consensus 156 ~~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~H 234 (1678)
+..-...+|.++++||+|+|+.|.+++.+ .+.+++|+|++++.-..+.+..++++ .|..+.... +|
T Consensus 244 ~~~l~l~df~ll~vigrgsyakvl~~~~~------~t~qiyamkvvkkel~nddedidwvq-------tek~vfe~asn~ 310 (593)
T KOG0695|consen 244 SQGLGLQDFDLLRVIGRGSYAKVLLVRLK------KTDQIYAMKVVKKELVNDDEDIDWVQ-------TEKHVFEQASNN 310 (593)
T ss_pred ccccccccceeeeeecCcchhhhhheehc------ccceeeehhhHHHHhcCCcccchhHH-------hhHHHHHhccCC
Confidence 33344679999999999999999999965 57899999999987666666666765 777777666 79
Q ss_pred CcccceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC
Q 000316 235 PNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 235 pNIV~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g 313 (1678)
|.+|.|+.+|+++..+++|.||++| +|.-.++ +...++++++++|..+|+.||.|||++|||.||||.+|+|++..|
T Consensus 311 pflvglhscfqtesrlffvieyv~ggdlmfhmq--rqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeg 388 (593)
T KOG0695|consen 311 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEG 388 (593)
T ss_pred CeEEehhhhhcccceEEEEEEEecCcceeeehh--hhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCC
Confidence 9999999999999999999999995 8887777 566799999999999999999999999999999999999999999
Q ss_pred ceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCC
Q 000316 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGR 393 (1678)
++||+|+|+++....... +..+-| |||.|.|||++++..|+..+|.|..| ++..++.+||
T Consensus 389 --hikltdygmcke~l~~gd-----~tstfc------gtpnyiapeilrgeeygfsvdwwalg-------vlmfemmagr 448 (593)
T KOG0695|consen 389 --HIKLTDYGMCKEGLGPGD-----TTSTFC------GTPNYIAPEILRGEEYGFSVDWWALG-------VLMFEMMAGR 448 (593)
T ss_pred --ceeecccchhhcCCCCCc-----cccccc------CCCcccchhhhcccccCceehHHHHH-------HHHHHHHcCC
Confidence 999999999997553222 122223 79999999999999999999999999 6667888999
Q ss_pred CCCCC
Q 000316 394 RWGDY 398 (1678)
Q Consensus 394 s~~dl 398 (1678)
+..|+
T Consensus 449 spfdi 453 (593)
T KOG0695|consen 449 SPFDI 453 (593)
T ss_pred CCcce
Confidence 98774
No 279
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.94 E-value=7.5e-26 Score=261.39 Aligned_cols=149 Identities=23% Similarity=0.222 Sum_probs=130.9
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.+.||+|+||.||++.+. .++..+++|.+.............. +|+++++.++|||++++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~~~~~~~ 66 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRK------SDGKLYVLKEIDLSNMSEKEREDAL--------NEVKILKKLNHPNIIKYYE 66 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEc------CCCcEEEEEEeecccCChHHHHHHH--------HHHHHHHhcCCCChhheEE
Confidence 5899999999999999999964 4678999999876544333334444 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSP--NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~--~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
.+...+..++||||+++ +|.+++.... ...+++..+..++.|++.||.|||++|++|+||||+||+++.++ .+||
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~--~~~l 144 (258)
T cd08215 67 SFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNG--LVKL 144 (258)
T ss_pred EEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCC--cEEE
Confidence 99999999999999996 9999998532 46789999999999999999999999999999999999999988 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||++..
T Consensus 145 ~d~~~~~~ 152 (258)
T cd08215 145 GDFGISKV 152 (258)
T ss_pred CCccceee
Confidence 99999864
No 280
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.94 E-value=2.5e-26 Score=270.54 Aligned_cols=147 Identities=21% Similarity=0.198 Sum_probs=126.9
Q ss_pred eeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-CCcccceee
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPVLG 242 (1678)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-HpNIV~l~~ 242 (1678)
|++.+.||+|+||+||+|... .++..++||.+...... ....... +|+..++.++ ||||+++++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~------~~~~~~~ik~~~~~~~~-~~~~~~~--------~e~~~l~~~~~h~~i~~~~~ 65 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNK------ETGELVAIKKMKKKFYS-WEECMNL--------REVKSLRKLNEHPNIVKLKE 65 (283)
T ss_pred CeeheeeccCCceEEEEEEEC------CCCcEEEEEEehhhccc-hhHHHHH--------HHHHHHHhccCCCCchhHHH
Confidence 678899999999999999964 35788999998653222 1111222 7999999999 999999999
Q ss_pred EEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEec
Q 000316 243 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DF 322 (1678)
++.+++..++||||++|+|.+++.......+++..+..++.|++.||.|||++||+|+||||+||+++.++ .+||+||
T Consensus 66 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~--~~~l~d~ 143 (283)
T cd07830 66 VFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPE--VVKIADF 143 (283)
T ss_pred HhhcCCcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCC--CEEEeec
Confidence 99999999999999988999999854445789999999999999999999999999999999999999998 8999999
Q ss_pred CCccc
Q 000316 323 PLVGF 327 (1678)
Q Consensus 323 GlA~~ 327 (1678)
|+++.
T Consensus 144 ~~~~~ 148 (283)
T cd07830 144 GLARE 148 (283)
T ss_pred cccee
Confidence 99873
No 281
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.94 E-value=1.5e-26 Score=273.45 Aligned_cols=149 Identities=19% Similarity=0.255 Sum_probs=125.7
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-CCcccce
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPV 240 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-HpNIV~l 240 (1678)
++|+..+.||+|+||.||++.+. .++..+|+|.+...... .....+. +|+.++.++. ||||+++
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~------~~~~~~aiK~~~~~~~~-~~~~~~~--------~e~~~l~~~~~~~~iv~~ 68 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHK------PSGTIMAVKRIRSTVDE-KEQKRLL--------MDLDVVMRSSDCPYIVKF 68 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEEC------CCCCEEEEEEehhccCh-HHHHHHH--------HHHHHHHHhcCCCCEeee
Confidence 46778899999999999999965 46789999998754322 2333344 8999999996 9999999
Q ss_pred eeEEEeCCeEEEeccCCCCCHHHHHhh---CCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCCeEecCCCcee
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQF---SPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSW 316 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g~L~~~l~~---~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~g~~~ 316 (1678)
++++..+...+++|||+++++.++... .....+++..+..++.|++.||+|||+ .||+||||||+|||++.++ .
T Consensus 69 ~~~~~~~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~--~ 146 (288)
T cd06616 69 YGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNG--N 146 (288)
T ss_pred eeEEecCCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCC--c
Confidence 999999999999999999876665432 234678999999999999999999998 4999999999999999998 8
Q ss_pred EEEEecCCccc
Q 000316 317 LYICDKPLVGF 327 (1678)
Q Consensus 317 lKL~DFGlA~~ 327 (1678)
+||+|||+++.
T Consensus 147 ~kl~dfg~~~~ 157 (288)
T cd06616 147 IKLCDFGISGQ 157 (288)
T ss_pred EEEeecchhHH
Confidence 99999999874
No 282
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.94 E-value=2.3e-26 Score=284.73 Aligned_cols=187 Identities=17% Similarity=0.084 Sum_probs=157.8
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++++.||+|+||.||+|... ....+..||+|.+..... .. +|+++|+.++|||||++
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~----~~~~~~~v~vK~~~~~~~-------~~--------~E~~il~~l~h~~iv~~ 151 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKH----GDEQRKKVIVKAVTGGKT-------PG--------REIDILKTISHRAIINL 151 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEc----CCccceeEEEEecccccc-------HH--------HHHHHHHhcCCCCccce
Confidence 457999999999999999999743 124567899998864321 11 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++|.....+|+|||++.++|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 152 ~~~~~~~~~~~lv~e~~~~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~--~~~l~ 227 (392)
T PHA03207 152 IHAYRWKSTVCMVMPKYKCDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPE--NAVLG 227 (392)
T ss_pred eeeEeeCCEEEEEehhcCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC--CEEEc
Confidence 99999999999999999999999996 456789999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||+++........ . ......||+.|+|||++....|+.++|+|+.|++.
T Consensus 228 DfG~a~~~~~~~~~-----~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil 277 (392)
T PHA03207 228 DFGAACKLDAHPDT-----P----QCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVL 277 (392)
T ss_pred cCccccccCccccc-----c----cccccccccCccCHhHhcCCCCCchhhHHHHHHHH
Confidence 99999754321110 0 01124589999999999999999999999999654
No 283
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.94 E-value=6.1e-26 Score=272.69 Aligned_cols=149 Identities=16% Similarity=0.161 Sum_probs=128.7
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh-HHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
...|+..+.||+|+||.||++++. .++..+|+|.+....... ....++. +|+++++.++||||++
T Consensus 24 ~~~f~~~~~lg~G~~~~v~~~~~~------~~~~~valK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~iv~ 89 (317)
T cd06635 24 EKLFTDLREIGHGSFGAVYFARDV------RTNEVVAIKKMSYSGKQSNEKWQDII--------KEVKFLQRIKHPNSIE 89 (317)
T ss_pred hhhhhhhheeccCCCeEEEEEEEc------CCCcEEEEEEEecCCCCchHHHHHHH--------HHHHHHHhCCCCCEEE
Confidence 345889999999999999999964 467899999987543322 2223343 8999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
+++++.++...++||||++|+|.+++.. ....+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 90 ~~~~~~~~~~~~lv~e~~~g~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~--~~kl 166 (317)
T cd06635 90 YKGCYLREHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPG--QVKL 166 (317)
T ss_pred EEEEEeeCCeEEEEEeCCCCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCC--CEEE
Confidence 9999999999999999999999888863 345689999999999999999999999999999999999999998 8999
Q ss_pred EecCCcc
Q 000316 320 CDKPLVG 326 (1678)
Q Consensus 320 ~DFGlA~ 326 (1678)
+|||++.
T Consensus 167 ~dfg~~~ 173 (317)
T cd06635 167 ADFGSAS 173 (317)
T ss_pred ecCCCcc
Confidence 9999876
No 284
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.94 E-value=9.7e-27 Score=280.40 Aligned_cols=187 Identities=20% Similarity=0.227 Sum_probs=152.2
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH-HHHHHHHhcCCCchhHHH-hhccCCCCcccceeeEEE
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESS-VPGCLRHPNVAPVLGLLK 245 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~l~~~~~~~~~Ei~-iL~~l~HpNIV~l~~~~~ 245 (1678)
+.||+|+||+||+|+++ .+++.||+|++.+...... ...+++ +|.. +++.++||||+++++++.
T Consensus 1 ~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~~~~~l~hp~iv~~~~~~~ 66 (323)
T cd05575 1 KVIGKGSFGKVLLAKHK------ADGKFYAVKVLQKKAILKKKEQKHIM--------AERNVLLKNVKHPFLVGLHYSFQ 66 (323)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhHHHHHH--------HHHHHHHhhCCCCCCCCeeEEEE
Confidence 47999999999999965 5788999999875432221 222333 4544 568899999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
+.+.+|+||||++| +|..++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~--~~kl~Dfg~ 142 (323)
T cd05575 67 TADKLYFVLDYVNGGELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQG--HVVLTDFGL 142 (323)
T ss_pred eCCEEEEEEcCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC--cEEEeccCC
Confidence 99999999999995 9999987 456789999999999999999999999999999999999999999 899999999
Q ss_pred cccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhH
Q 000316 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 384 (1678)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL 384 (1678)
++....... . .....||+.|+|||++.+..|+.++|+|+.|++. |+++
T Consensus 143 ~~~~~~~~~-----~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il-~ell 190 (323)
T cd05575 143 CKEGIEHSK-----T------TSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVL-YEML 190 (323)
T ss_pred CcccccCCC-----c------cccccCChhhcChhhhcCCCCCccccccccchhh-hhhh
Confidence 975321110 0 1122378999999999999999999999999665 4444
No 285
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.94 E-value=2.1e-26 Score=270.71 Aligned_cols=147 Identities=22% Similarity=0.262 Sum_probs=128.2
Q ss_pred eeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeE
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1678)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~ 243 (1678)
|++.+.||+|++|.||+|.+. .++..+++|.+............+. +|+.+|+.++||||++++++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~~ 66 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDK------LTGEIVAIKKIKLRFESEGIPKTAL--------REIKLLKELNHPNIIKLLDV 66 (283)
T ss_pred CccceeeecCCCceEEEEEcC------CCCcEEEEEEeccccccchhHHHHH--------HHHHHHHHhcCCCcchHHHh
Confidence 677899999999999999964 4688899999876433322233333 89999999999999999999
Q ss_pred EEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecC
Q 000316 244 LKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1678)
Q Consensus 244 ~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFG 323 (1678)
+.+++.+++||||++++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||+|||
T Consensus 67 ~~~~~~~~~v~e~~~~~l~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~--~~~l~df~ 143 (283)
T cd05118 67 FRHKGDLYLVFEFMDTDLYKLIKD-RQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEG--VLKLADFG 143 (283)
T ss_pred hccCCCEEEEEeccCCCHHHHHHh-hcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCC--cEEEeeee
Confidence 999999999999999999998884 235789999999999999999999999999999999999999988 89999999
Q ss_pred Cccc
Q 000316 324 LVGF 327 (1678)
Q Consensus 324 lA~~ 327 (1678)
.+..
T Consensus 144 ~~~~ 147 (283)
T cd05118 144 LARS 147 (283)
T ss_pred eeEe
Confidence 8863
No 286
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.94 E-value=8.5e-27 Score=280.60 Aligned_cols=183 Identities=20% Similarity=0.215 Sum_probs=150.3
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH-HHHHHHHhcCCCchhHH-HhhccCCCCcccceeeEEE
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDES-SVPGCLRHPNVAPVLGLLK 245 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~l~~~~~~~~~Ei-~iL~~l~HpNIV~l~~~~~ 245 (1678)
+.||+|+||.||+|++. .++..||+|++.+...... ...++. +|. .+++.++||||+++++++.
T Consensus 1 ~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~~l~~~~h~~iv~~~~~~~ 66 (321)
T cd05603 1 KVIGKGSFGKVLLAKRK------SDGSFYAVKVLQKKTILKKKEQNHIM--------AERNVLLKNLKHPFLVGLHYSFQ 66 (321)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHHHHhhHHHHHH--------HHHHHHHHhCCCCCccceeeEEE
Confidence 47999999999999965 4688999999875432221 222333 455 4678899999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
+.+..|+||||++| +|...+. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~ 142 (321)
T cd05603 67 TAEKLYFVLDYVNGGELFFHLQ--RERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQG--HVVLTDFGL 142 (321)
T ss_pred cCCEEEEEEcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC--CEEEccCCC
Confidence 99999999999995 9988887 456789999999999999999999999999999999999999999 899999999
Q ss_pred cccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
++...... .. .....||+.|+|||++.+..|+.++|+|+.|++.
T Consensus 143 ~~~~~~~~-----~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 186 (321)
T cd05603 143 CKEGVEPE-----ET------TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVL 186 (321)
T ss_pred CccCCCCC-----Cc------cccccCCcccCCHHHhcCCCCCCcCcccccchhh
Confidence 87532111 00 1122378999999999999999999999999664
No 287
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.94 E-value=3.4e-26 Score=268.39 Aligned_cols=151 Identities=22% Similarity=0.243 Sum_probs=130.6
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-CCcccce
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPV 240 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-HpNIV~l 240 (1678)
++|++.+.||+|+||.||+|.+. .++..+|+|++.+.........+.+. +|+.+++.++ ||||+++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~-------~e~~~~~~l~~~~~i~~~ 67 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEK------ETNKEYAIKILDKRQLIKEKKVKYVK-------IEKEVLTRLNGHPGIIKL 67 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEc------CCCCEEEEEEechHhccchHHHHHHH-------HHHHHHHhcccCCCchhH
Confidence 36999999999999999999964 47889999998764333222222222 8999999998 9999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+++..++||||++ ++|.+++. ....+++..+..++.|++.||.|||++|++|+||||+||+++.++ .++|
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~--~~~l 143 (280)
T cd05581 68 YYTFQDEENLYFVLEYAPNGELLQYIR--KYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDM--HIKI 143 (280)
T ss_pred HHHhcCCceEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC--CEEe
Confidence 999999999999999996 59999998 345789999999999999999999999999999999999999999 8999
Q ss_pred EecCCcccCC
Q 000316 320 CDKPLVGFNS 329 (1678)
Q Consensus 320 ~DFGlA~~~~ 329 (1678)
+|||++....
T Consensus 144 ~df~~~~~~~ 153 (280)
T cd05581 144 TDFGTAKVLD 153 (280)
T ss_pred cCCccccccC
Confidence 9999998543
No 288
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.94 E-value=1e-26 Score=280.53 Aligned_cols=187 Identities=20% Similarity=0.217 Sum_probs=152.4
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh-HHHHHHHHhcCCCchhHHH-hhccCCCCcccceeeEEE
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESS-VPGCLRHPNVAPVLGLLK 245 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~l~~~~~~~~~Ei~-iL~~l~HpNIV~l~~~~~ 245 (1678)
+.||+|+||+||+|++. .++..+|+|++.+..... ....++. +|.. +++.++||||+++++++.
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~~l~~~~hp~iv~~~~~~~ 66 (325)
T cd05604 1 KVIGKGSFGKVLLAKRK------LDGKCYAVKVLQKKIVLNRKEQKHIM--------AERNVLLKNVKHPFLVGLHYSFQ 66 (325)
T ss_pred CceeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHHhCCCCCCccEEEEEe
Confidence 46999999999999965 578899999987542222 2222333 5554 578899999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
.++.+|+||||++| +|..++. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~--~~kL~DfG~ 142 (325)
T cd05604 67 TTEKLYFVLDFVNGGELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQG--HVVLTDFGL 142 (325)
T ss_pred cCCEEEEEEcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC--CEEEeecCC
Confidence 99999999999995 9988887 456789999999999999999999999999999999999999999 899999999
Q ss_pred cccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhH
Q 000316 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 384 (1678)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL 384 (1678)
++....... . .....||+.|||||++.+..|+.++|+|+.|++. |+++
T Consensus 143 ~~~~~~~~~-----~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il-~el~ 190 (325)
T cd05604 143 CKEGIAQSD-----T------TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVL-YEML 190 (325)
T ss_pred cccCCCCCC-----C------cccccCChhhCCHHHHcCCCCCCcCcccccccee-hhhh
Confidence 975321110 0 1123478999999999999999999999999765 4443
No 289
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.94 E-value=6e-26 Score=267.02 Aligned_cols=145 Identities=18% Similarity=0.193 Sum_probs=126.0
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
-|++++.||+|+||.||+|.+. .++..+|+|.+..... ......+. +|+.+++.++||||+++++
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~------~~~~~~aiK~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~~iv~~~~ 69 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDN------RTQKVVAIKIIDLEEA-EDEIEDIQ--------QEITVLSQCDSPYVTKYYG 69 (277)
T ss_pred hhhhheeEeecCCeEEEEEEEC------CCCcEEEEEEeccccc-hHHHHHHH--------HHHHHHHhcCCCCEeEEEE
Confidence 4788999999999999999864 4678999999865322 22223333 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++..++..|+||||+++ +|.+++. ...++...+..++.|++.|+.|||++||+|+||||+||+++.++ .++|+|
T Consensus 70 ~~~~~~~~~lv~e~~~~~~l~~~i~---~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~--~~~l~d 144 (277)
T cd06641 70 SYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG--EVKLAD 144 (277)
T ss_pred EEEeCCeEEEEEEeCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCC--CEEEee
Confidence 99999999999999995 9998887 34578999999999999999999999999999999999999998 899999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+++.
T Consensus 145 fg~~~~ 150 (277)
T cd06641 145 FGVAGQ 150 (277)
T ss_pred ccccee
Confidence 999863
No 290
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.94 E-value=4.2e-26 Score=265.37 Aligned_cols=141 Identities=15% Similarity=0.130 Sum_probs=117.8
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH-HHHHHHHhcCCCchhHHHh-hccCCCCcccceeeEEE
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSV-PGCLRHPNVAPVLGLLK 245 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~l~~~~~~~~~Ei~i-L~~l~HpNIV~l~~~~~ 245 (1678)
+.||+|+||.||+|.+. .++..+|+|.+.+...... ...... .|..+ ....+||||+++++++.
T Consensus 2 ~~l~~g~~~~v~~a~~~------~~~~~vavK~~~~~~~~~~~~~~~~~--------~e~~~~~~~~~~~~i~~~~~~~~ 67 (260)
T cd05611 2 KPISKGAFGSVYLAKKR------STGDYFAIKVLKKSDMIAKNQVTNVK--------AERAIMMIQGESPYVAKLYYSFQ 67 (260)
T ss_pred ccCCcCCCeeEEEEEec------CCCCeEEEEEecchhhhHHHHHHHHH--------HHHHHHhhcCCCCCeeeeeeeEE
Confidence 67999999999999964 4678999999865432221 112222 45444 45558999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
.++.+|+||||++| +|.+++. ....+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||+|||+
T Consensus 68 ~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~--~~~l~dfg~ 143 (260)
T cd05611 68 SKDYLYLVMEYLNGGDCASLIK--TLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTG--HLKLTDFGL 143 (260)
T ss_pred cCCeEEEEEeccCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--cEEEeeccc
Confidence 99999999999985 9999998 345689999999999999999999999999999999999999998 899999998
Q ss_pred cc
Q 000316 325 VG 326 (1678)
Q Consensus 325 A~ 326 (1678)
++
T Consensus 144 ~~ 145 (260)
T cd05611 144 SR 145 (260)
T ss_pred ce
Confidence 86
No 291
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.94 E-value=1.5e-25 Score=280.83 Aligned_cols=255 Identities=20% Similarity=0.371 Sum_probs=220.1
Q ss_pred EEEEeCCCCEEEEeCC-CceeEE-eccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEE
Q 000316 1301 LGRVGGLKDESPWKIK-ASILSS-IRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVND 1378 (1678)
Q Consensus 1301 LasgS~D~~v~lWd~~-~~~l~t-l~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~s 1378 (1678)
+.+++.|.++++||.. +..+.+ +.||.+.|+++++..-+.++++||. |.|+|+||..+|+|..++.||...|.+
T Consensus 221 ~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~----D~t~rvWd~~sg~C~~~l~gh~stv~~ 296 (537)
T KOG0274|consen 221 FKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGST----DKTERVWDCSTGECTHSLQGHTSSVRC 296 (537)
T ss_pred EEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEec----CCcEEeEecCCCcEEEEecCCCceEEE
Confidence 8999999999999987 667776 9999999999999988889999998 999999999999999999999999999
Q ss_pred EeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCce
Q 000316 1379 ICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLY 1456 (1678)
Q Consensus 1379 V~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~v 1456 (1678)
+... ...+ +|.|.+|++|++.+++++.++.+|. +.|.++..+
T Consensus 297 ~~~~--~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~------------------------------~~V~~v~~~---- 340 (537)
T KOG0274|consen 297 LTID--PFLLVSGSRDNTVKVWDVTNGACLNLLRGHT------------------------------GPVNCVQLD---- 340 (537)
T ss_pred EEcc--CceEeeccCCceEEEEeccCcceEEEecccc------------------------------ccEEEEEec----
Confidence 9863 3334 4579999999999999999887542 334444433
Q ss_pred eEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeE
Q 000316 1457 TCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQC 1536 (1678)
Q Consensus 1457 t~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I 1536 (1678)
+..+++|+.|++|++||++++++++++.+|. ..|.++.+.+. +.+++|+.|++|
T Consensus 341 --------~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~------~~V~sl~~~~~------------~~~~Sgs~D~~I 394 (537)
T KOG0274|consen 341 --------EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHT------GRVYSLIVDSE------------NRLLSGSLDTTI 394 (537)
T ss_pred --------CCEEEEEecCceEEEEEhhhceeeeeecCCc------ceEEEEEecCc------------ceEEeeeeccce
Confidence 6699999999999999999999999999765 45777765321 589999999999
Q ss_pred EEEeCCCC-cEEEEEeccCCCeEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeec-CCCCEEEEEecCCEEEEEe
Q 000316 1537 RLFDVRSG-NVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKG-HTNGISGFSVWGQDVISIS 1614 (1678)
Q Consensus 1537 ~lWD~~tg-~~i~~l~gH~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~g-H~~~V~afSpdg~~LaSgs 1614 (1678)
++||+++. +++.++.+|...|.++. ..++.|+|++.|++|++||..++ .++.++.+ |...|.++......+++++
T Consensus 395 kvWdl~~~~~c~~tl~~h~~~v~~l~-~~~~~Lvs~~aD~~Ik~WD~~~~--~~~~~~~~~~~~~v~~l~~~~~~il~s~ 471 (537)
T KOG0274|consen 395 KVWDLRTKRKCIHTLQGHTSLVSSLL-LRDNFLVSSSADGTIKLWDAEEG--ECLRTLEGRHVGGVSALALGKEEILCSS 471 (537)
T ss_pred EeecCCchhhhhhhhcCCcccccccc-cccceeEeccccccEEEeecccC--ceeeeeccCCcccEEEeecCcceEEEEe
Confidence 99999999 99999999999887665 45679999999999999999998 77788888 7889998887767888888
Q ss_pred CCC-eEEEecC
Q 000316 1615 NNK-IGLSSLS 1624 (1678)
Q Consensus 1615 ~D~-I~vwdl~ 1624 (1678)
.|+ +++||+.
T Consensus 472 ~~~~~~l~dl~ 482 (537)
T KOG0274|consen 472 DDGSVKLWDLR 482 (537)
T ss_pred cCCeeEEEecc
Confidence 888 9999986
No 292
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.94 E-value=6.8e-26 Score=263.40 Aligned_cols=147 Identities=20% Similarity=0.249 Sum_probs=129.7
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++.+.||+|+||.||+|.+. .++..+++|++...... .....+. +|+..++.++||||++++
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~------~~~~~~~vk~~~~~~~~-~~~~~~~--------~e~~~l~~l~~~~i~~~~ 65 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHK------PTGKIYALKKIHVDGDE-EFRKQLL--------RELKTLRSCESPYVVKCY 65 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEc------CCCcEEEEEEeccCcch-HHHHHHH--------HHHHHHHhcCCCCeeeEE
Confidence 36899999999999999999965 46889999998764322 2233444 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCCeEecCCCceeEEE
Q 000316 242 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
+++......++||||++ ++|.+++.. ...+++..+..++.|++.||.|||+ +|++||||||+||+++.++ .+||
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~--~~~l 141 (264)
T cd06623 66 GAFYKEGEISIVLEYMDGGSLADLLKK--VGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKG--EVKI 141 (264)
T ss_pred EEEccCCeEEEEEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCC--CEEE
Confidence 99999999999999999 599999983 4678999999999999999999999 9999999999999999999 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||+++.
T Consensus 142 ~df~~~~~ 149 (264)
T cd06623 142 ADFGISKV 149 (264)
T ss_pred ccCcccee
Confidence 99998873
No 293
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.94 E-value=1.1e-25 Score=266.28 Aligned_cols=143 Identities=18% Similarity=0.198 Sum_probs=124.0
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
.|...+.||+|++|.||++.+. .++..+++|.+.... ......+. +|+.+++.++||||+++++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~------~~~~~~~iK~~~~~~--~~~~~~~~--------~e~~~l~~~~h~~vv~~~~ 83 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDK------STGRQVAVKKMDLRK--QQRRELLF--------NEVVIMRDYQHPNIVEMYS 83 (285)
T ss_pred hhhcceEeccCCCeEEEEEEEC------CCCCEEEEEEEeccc--hhHHHHHH--------HHHHHHHHcCCCChheEEE
Confidence 4666789999999999999864 457889999886422 12222333 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++...+..++|+||++| +|.+++.. ..+++..+..++.|++.||+|||++||+||||||+||+++.++ .+||+|
T Consensus 84 ~~~~~~~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~--~~~l~d 158 (285)
T cd06648 84 SYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDG--RVKLSD 158 (285)
T ss_pred EEEcCCeEEEEEeccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCC--cEEEcc
Confidence 99999999999999985 99999883 5688999999999999999999999999999999999999999 899999
Q ss_pred cCCcc
Q 000316 322 KPLVG 326 (1678)
Q Consensus 322 FGlA~ 326 (1678)
||+++
T Consensus 159 ~g~~~ 163 (285)
T cd06648 159 FGFCA 163 (285)
T ss_pred cccch
Confidence 99876
No 294
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.94 E-value=3.7e-26 Score=268.50 Aligned_cols=147 Identities=23% Similarity=0.283 Sum_probs=128.2
Q ss_pred eeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeE
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1678)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~ 243 (1678)
|+..+.||+|.||.||+|++. .++..+|+|.+............+. +|+.+++.++||||++++++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~i~~~~~~ 66 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDK------KTGEIVALKKIRLDNEEEGIPSTAL--------REISLLKELKHPNIVKLLDV 66 (282)
T ss_pred CeeehcccccCcceEEEeeec------CCCcEEEEEEeccccccccccHHHH--------HHHHHHHhcCCCCHHHHHhh
Confidence 677899999999999999964 4688999999976532222223333 89999999999999999999
Q ss_pred EEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecC
Q 000316 244 LKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1678)
Q Consensus 244 ~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFG 323 (1678)
+.+.+..++||||++++|.+++... ...+++..++.++.|++.||.|||++||+||||||+||++++++ .+||+|||
T Consensus 67 ~~~~~~~~~v~e~~~~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~--~~~l~d~g 143 (282)
T cd07829 67 IHTERKLYLVFEYCDMDLKKYLDKR-PGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDG--VLKLADFG 143 (282)
T ss_pred hhcCCceEEEecCcCcCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCC--CEEEecCC
Confidence 9999999999999999999999842 24689999999999999999999999999999999999999998 89999999
Q ss_pred Cccc
Q 000316 324 LVGF 327 (1678)
Q Consensus 324 lA~~ 327 (1678)
+++.
T Consensus 144 ~~~~ 147 (282)
T cd07829 144 LARA 147 (282)
T ss_pred cccc
Confidence 9873
No 295
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.94 E-value=1.1e-26 Score=279.87 Aligned_cols=188 Identities=14% Similarity=0.114 Sum_probs=155.2
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH-HHHHHHHhcCCCchhHHHhhccCC-CCcccce
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLR-HPNVAPV 240 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~l~~~~~~~~~Ei~iL~~l~-HpNIV~l 240 (1678)
+|+..+.||+|+||.||+|+++ .++..||+|++.+...... ....+. .|+.+++.+. |++|+++
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~i~~~ 66 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERK------GTDELYAIKILKKDVVIQDDDVECTM--------VEKRVLALQDKPPFLTQL 66 (323)
T ss_pred CceEEEEEEecCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhccCCCchhhe
Confidence 4788999999999999999965 4788999999876432222 222233 7888888886 5788899
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+.+.+|+||||++| +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~Ey~~~g~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~--~ikL 142 (323)
T cd05615 67 HSCFQTVDRLYFVMEYVNGGDLMYHIQ--QVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEG--HIKI 142 (323)
T ss_pred eeEEecCCEEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEEE
Confidence 9999999999999999984 9999987 456789999999999999999999999999999999999999999 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++....... . .....||+.|+|||++.+..++.++|+|+.|++.
T Consensus 143 ~Dfg~~~~~~~~~~-----~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil 191 (323)
T cd05615 143 ADFGMCKEHMVDGV-----T------TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLL 191 (323)
T ss_pred eccccccccCCCCc-----c------ccCccCCccccCHHHHcCCCCCCccchhhhHHHH
Confidence 99999985321110 0 1112378999999999999999999999999554
No 296
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.94 E-value=1.2e-26 Score=279.99 Aligned_cols=183 Identities=20% Similarity=0.209 Sum_probs=149.8
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh-HHHHHHHHhcCCCchhHH-HhhccCCCCcccceeeEEE
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDES-SVPGCLRHPNVAPVLGLLK 245 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~l~~~~~~~~~Ei-~iL~~l~HpNIV~l~~~~~ 245 (1678)
+.||+|+||+||+|++. .++..+|+|++.+..... ....+.. +|. .+++.++||||+++++++.
T Consensus 1 ~~lg~G~fg~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~~l~~~~h~~Iv~~~~~~~ 66 (325)
T cd05602 1 KVIGKGSFGKVLLARHK------AEEKFYAVKVLQKKAILKKKEEKHIM--------SERNVLLKNVKHPFLVGLHFSFQ 66 (325)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHHHhhhHHHHHH--------HHHHHHHHhCCCCCCCceeEEEE
Confidence 47999999999999965 467889999987532221 1222333 444 4578899999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
+.+.+|+||||++| +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~--~~kl~DfG~ 142 (325)
T cd05602 67 TADKLYFVLDYINGGELFYHLQ--RERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG--HIVLTDFGL 142 (325)
T ss_pred cCCeEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--CEEEccCCC
Confidence 99999999999995 9999998 456688999999999999999999999999999999999999999 899999999
Q ss_pred cccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
++....... . .....||+.|||||++.+..|+.++|+|+.|++.
T Consensus 143 a~~~~~~~~-----~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 186 (325)
T cd05602 143 CKENIEHNG-----T------TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVL 186 (325)
T ss_pred CcccccCCC-----C------cccccCCccccCHHHHcCCCCCCccccccccHHH
Confidence 985331110 0 1123478999999999999999999999999664
No 297
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.94 E-value=8.1e-26 Score=267.62 Aligned_cols=151 Identities=17% Similarity=0.152 Sum_probs=127.2
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH-HHHHHHHhcCCCchhHHHhhccC-CCCcccce
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCL-RHPNVAPV 240 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~l 240 (1678)
+|++.+.||+|+||.||+|++.. ...++..||+|.+........ ...+... +|+++|+.+ +||||+++
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~---~~~~g~~~aiK~~~~~~~~~~~~~~~~~~-------~e~~~l~~l~~~~~i~~~ 70 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVS---GHDSGKLYAMKVLKKATIVQKAKTTEHTR-------TERQVLEHIRQSPFLVTL 70 (290)
T ss_pred CceeeeeeccCCcceEEEEEecc---CCCCCceEEEEEeehhhhhhcchHHHHHH-------HHHHHHHhcccCCChhce
Confidence 48899999999999999998642 224688999999875322111 1112222 899999999 58999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
+++|..+..+|+||||+++ +|.+++. ....+++..+..++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 71 ~~~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~--~~kl 146 (290)
T cd05613 71 HYAFQTDTKLHLILDYINGGELFTHLS--QRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNG--HVVL 146 (290)
T ss_pred eeEeecCCeEEEEEecCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCC--CEEE
Confidence 9999999999999999995 9999998 345688999999999999999999999999999999999999998 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||+++.
T Consensus 147 ~dfg~~~~ 154 (290)
T cd05613 147 TDFGLSKE 154 (290)
T ss_pred eeCcccee
Confidence 99999873
No 298
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.94 E-value=1.2e-26 Score=278.97 Aligned_cols=187 Identities=18% Similarity=0.157 Sum_probs=154.4
Q ss_pred eeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEe
Q 000316 167 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1678)
Q Consensus 167 ~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~ 246 (1678)
++.||+|+||.||++++... ..++..+|+|++.+............ +|+++|+.++||||+++++++.+
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~niv~~~~~~~~ 69 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITG---PDAGQLYAMKVLKKATLKVRDRVRTK--------MERDILAEVNHPFIVKLHYAFQT 69 (318)
T ss_pred CceeeeCCCEEEEEEEEecc---CCCCCEEEEEEEEHHHhhhhhHHHHH--------HHHHHHHhCCCCCcccEEEEEEc
Confidence 36899999999999986421 24688999999976432222222232 89999999999999999999999
Q ss_pred CCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCc
Q 000316 247 SGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1678)
Q Consensus 247 ~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA 325 (1678)
++.+|+||||++ |+|.+++. +...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 70 ~~~~~lv~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~--~~kL~Dfg~~ 145 (318)
T cd05582 70 EGKLYLILDFLRGGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG--HIKLTDFGLS 145 (318)
T ss_pred CCEEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCC--cEEEeeccCC
Confidence 999999999998 59999997 456689999999999999999999999999999999999999999 8999999999
Q ss_pred ccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+....... ......||+.|+|||++.+..++.++|+|+.|++.
T Consensus 146 ~~~~~~~~-----------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il 188 (318)
T cd05582 146 KESIDHEK-----------KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLM 188 (318)
T ss_pred cccCCCCC-----------ceecccCChhhcCHHHHcCCCCCCccceeccceEe
Confidence 85432100 01123478899999999999999999999999664
No 299
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.94 E-value=2e-26 Score=278.46 Aligned_cols=192 Identities=20% Similarity=0.213 Sum_probs=156.2
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccceeeEEEe
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLKT 246 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~l~~~~~~ 246 (1678)
+.||+|+||.||+|+++ .++..+|+|++++.........+.+. +|+.++..+ +||||+++++++.+
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~E~~~l~~~~~hp~iv~~~~~~~~ 67 (329)
T cd05618 1 RVIGRGSYAKVLLVRLK------KTERIYAMKVVKKELVNDDEDIDWVQ-------TEKHVFEQASNHPFLVGLHSCFQT 67 (329)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEhhHhcchhHHHHHH-------HHHHHHHhcCCCCcCCceeeEEEe
Confidence 47999999999999965 46789999999865333322222232 788888776 89999999999999
Q ss_pred CCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCc
Q 000316 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1678)
Q Consensus 247 ~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA 325 (1678)
++.+|+||||+++ +|..++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 68 ~~~~~lv~E~~~~~~L~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~--~~kL~DfG~~ 143 (329)
T cd05618 68 ESRLFFVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG--HIKLTDYGMC 143 (329)
T ss_pred CCEEEEEEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC--CEEEeeCCcc
Confidence 9999999999995 9998887 456789999999999999999999999999999999999999999 8999999999
Q ss_pred ccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCC
Q 000316 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1678)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs 394 (1678)
+........ .....||+.|+|||++.+..++.++|+|+.|++ .+.++.|+.
T Consensus 144 ~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i-------l~el~~g~~ 194 (329)
T cd05618 144 KEGLRPGDT-----------TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVL-------MFEMMAGRS 194 (329)
T ss_pred ccccCCCCc-----------cccccCCccccCHHHHcCCCCCCccceecccHH-------HHHHhhCCC
Confidence 753211100 111247899999999999999999999999955 444555654
No 300
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.94 E-value=1.2e-26 Score=281.30 Aligned_cols=198 Identities=17% Similarity=0.152 Sum_probs=155.7
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
.++|++.++||+|+||.||+|.+.. .....++..||+|+++... .......+. +|+.+|+.+ +|||||+
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~~~~~~~vavK~~~~~~-~~~~~~~~~--------~E~~~l~~l~~h~niv~ 75 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFG-IDKKSSCNTVAVKMLKEGA-TASEHKALM--------SELKILIHIGNHLNVVN 75 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEec-cCCcccchhhheecccccc-chHHHHHHH--------HHHHHHHHhccCcceee
Confidence 4689999999999999999998531 1122456789999987532 222333444 899999999 8999999
Q ss_pred eeeEEEeCC-eEEEeccCCC-CCHHHHHhhCC------------------------------------------------
Q 000316 240 VLGLLKTSG-LITSVIPKTP-YTLENILQFSP------------------------------------------------ 269 (1678)
Q Consensus 240 l~~~~~~~~-~~~lVmEy~~-g~L~~~l~~~~------------------------------------------------ 269 (1678)
+++++...+ .+++||||++ |+|.+++....
T Consensus 76 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (338)
T cd05102 76 LLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSG 155 (338)
T ss_pred EEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCc
Confidence 999887644 6899999999 59999997421
Q ss_pred ------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCcccCCCCCccccc
Q 000316 270 ------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIP 337 (1678)
Q Consensus 270 ------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~ 337 (1678)
...++...+..++.||+.||+|||++||+||||||+|||++.++ .+||+|||+++.........
T Consensus 156 ~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~--~~kl~DfG~a~~~~~~~~~~-- 231 (338)
T cd05102 156 STNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENN--VVKICDFGLARDIYKDPDYV-- 231 (338)
T ss_pred ccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCC--cEEEeecccccccccCcchh--
Confidence 12477788899999999999999999999999999999999998 89999999998543211100
Q ss_pred CCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 338 TSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 338 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
......+++.|||||++.+..|+.++|+|+.|++.
T Consensus 232 -------~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il 266 (338)
T cd05102 232 -------RKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLL 266 (338)
T ss_pred -------cccCCCCCccccCcHHhhcCCCCcccCHHHHHHHH
Confidence 01122356789999999999999999999999654
No 301
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.94 E-value=8.9e-26 Score=270.14 Aligned_cols=150 Identities=17% Similarity=0.173 Sum_probs=128.6
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcC-hHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKAS-GQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
...|+..+.||+|+||.||+|++. .++..+|+|.+...... .....++. +|+++++.++||||++
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~ 79 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDV------RNSEVVAIKKMSYSGKQSNEKWQDII--------KEVRFLQKLRHPNTIQ 79 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEc------CCCcEEEEEEEecccccChHHHHHHH--------HHHHHHHhCCCCCccc
Confidence 345888999999999999999964 46788999998653222 22223344 8999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
+++++......++||||+.|+|.+++.. ....+++..+..++.|++.||.|||+++++||||||+|||++.++ .+||
T Consensus 80 ~~~~~~~~~~~~lv~e~~~~~l~~~~~~-~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~--~~kl 156 (308)
T cd06634 80 YRGCYLREHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG--LVKL 156 (308)
T ss_pred EEEEEEcCCeeEEEEEccCCCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCC--cEEE
Confidence 9999999999999999999999888763 345589999999999999999999999999999999999999998 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||++..
T Consensus 157 ~dfg~~~~ 164 (308)
T cd06634 157 GDFGSASI 164 (308)
T ss_pred CCccccee
Confidence 99998863
No 302
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.4e-27 Score=275.09 Aligned_cols=201 Identities=16% Similarity=0.146 Sum_probs=170.4
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.+.|..-+.||+|+||+||-|+.+ .+|+.+|.|.+.+........... +++|..+|+.++.+.||.+
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvr------aTGKMYAcKkL~KKRiKkr~ge~m-------aLnEk~iL~kV~s~FiVsl 250 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVR------ATGKMYACKKLDKKRIKKRKGETM-------ALNEKQILEKVSSPFIVSL 250 (591)
T ss_pred ccceeeeEEEecccccceeEEEEe------cchhhHHHHHHHHHHHHHhhhhHH-------hhHHHHHHHHhccCcEEEE
Confidence 457888999999999999998854 689999999987754333222221 3599999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
-.+|++.+.+++||..|.| ||.-.|....+..+++..+++|+.+|+.||++||+.+||.|||||+|||+|+.| +++|
T Consensus 251 aYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~G--hvRI 328 (591)
T KOG0986|consen 251 AYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHG--HVRI 328 (591)
T ss_pred eeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCC--CeEe
Confidence 9999999999999999995 999888866667899999999999999999999999999999999999999999 9999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCCC
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs~ 395 (1678)
+|+|+|....... + .+.-+||..|||||++.+..|+...|.|+.||+ ++.+++|++.
T Consensus 329 SDLGLAvei~~g~-------~-----~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCl-------lYemi~G~sP 385 (591)
T KOG0986|consen 329 SDLGLAVEIPEGK-------P-----IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCL-------LYEMIAGHSP 385 (591)
T ss_pred eccceEEecCCCC-------c-----cccccCcccccCHHHHcCCcccCCccHHHHHhH-------HHHHHcccCc
Confidence 9999998655211 1 112258999999999999999999999999955 4566677763
No 303
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.94 E-value=2.6e-25 Score=256.78 Aligned_cols=147 Identities=21% Similarity=0.279 Sum_probs=129.8
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.+.||+|++|.||++.+. ..+..+++|.+............+. +|++++++++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNL------ETGDFVAIKQISLEKIKEEALKSIM--------QEIDLLKNLKHPNIVKYIG 66 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEc------CCCcEEEEEEecccccCHHHHHHHH--------HHHHHHHhCCCCCccEEEE
Confidence 5899999999999999999864 4678899999977544333333444 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++.+++..++||||+++ +|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 67 ~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~--~~~l~d 142 (254)
T cd06627 67 SIETSDSLYIILEYAENGSLRQIIKK--FGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDG--VVKLAD 142 (254)
T ss_pred EEEeCCEEEEEEecCCCCcHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCC--CEEEec
Confidence 99999999999999996 99999983 46789999999999999999999999999999999999999988 899999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+++.
T Consensus 143 ~~~~~~ 148 (254)
T cd06627 143 FGVATK 148 (254)
T ss_pred ccccee
Confidence 999874
No 304
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.94 E-value=2.2e-25 Score=257.20 Aligned_cols=147 Identities=20% Similarity=0.210 Sum_probs=129.0
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.+.||+|++|.||+|.+. .++..+++|.+............+. +|+.+++.++||||+++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDK------DTGELMAVKSVELSGDSEEELEALE--------REIRILSSLQHPNIVRYYG 66 (260)
T ss_pred CceeeeEeeecCceEEEEEEEC------CCCcEEEEEEeeccccchHHHHHHH--------HHHHHHHHcCCCCEeeEEE
Confidence 5889999999999999999964 4688999999876544333333343 8999999999999999999
Q ss_pred EEEeC--CeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 243 LLKTS--GLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 243 ~~~~~--~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
.+... ...++||||++ ++|.+++.. ...+++..+..++.|++.||.|||++|++|+||+|+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~--~~~l 142 (260)
T cd06606 67 SERDEEKNTLNIFLEYVSGGSLSSLLKK--FGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDG--VVKL 142 (260)
T ss_pred EEecCCCCeEEEEEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC--CEEE
Confidence 99988 89999999997 599999984 33789999999999999999999999999999999999999988 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||.+..
T Consensus 143 ~d~~~~~~ 150 (260)
T cd06606 143 ADFGCAKR 150 (260)
T ss_pred cccccEEe
Confidence 99999874
No 305
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.94 E-value=1.7e-25 Score=258.93 Aligned_cols=149 Identities=20% Similarity=0.257 Sum_probs=129.7
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.++||+|+||.||++++. .++..+|+|.+...........++. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRL------SDNQFYALKEVDLGSMSQKEREDAV--------NEIRILASVNHPNIISYKE 66 (256)
T ss_pred CceEeeeecCCCceeEEEEEEC------CCCCEEEEEEEehhhccHHHHHHHH--------HHHHHHHhCCCCCchhhhh
Confidence 5899999999999999999864 4678899999876444433334444 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++.+....|+||||+++ +|.+++... ....+++..+..++.|++.||.|||++|++||||||+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~--~~kl 144 (256)
T cd08530 67 AFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVAND--LVKI 144 (256)
T ss_pred hhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCC--cEEE
Confidence 99999999999999985 999998742 235688999999999999999999999999999999999999988 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||+++.
T Consensus 145 ~d~g~~~~ 152 (256)
T cd08530 145 GDLGISKV 152 (256)
T ss_pred eeccchhh
Confidence 99999874
No 306
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=2.2e-26 Score=278.58 Aligned_cols=202 Identities=20% Similarity=0.201 Sum_probs=165.5
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|..-..||+|+||.||+|.- .++..||||.+....... .++|. +|+.+|.+++|||+|+|
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l-------~~~~~vAVK~~~~~~~~~--~~eF~--------~Ei~~ls~l~H~Nlv~L 136 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVL-------SDGTVVAVKRLSSNSGQG--EREFL--------NEVEILSRLRHPNLVKL 136 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEE-------CCCCEEEEEEecCCCCcc--hhHHH--------HHHHHHhcCCCcCcccE
Confidence 35788889999999999998883 456899999886643321 44566 99999999999999999
Q ss_pred eeEEEeCC-eEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCCCCCeEecCCCce
Q 000316 241 LGLLKTSG-LITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSL---GIAHRSVCPSNVLLTDSCWS 315 (1678)
Q Consensus 241 ~~~~~~~~-~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~---gIiHRDLKP~NILl~~~g~~ 315 (1678)
+|+|.+.+ ..+||+|||+ |+|.+.+.......++......|+.++++||+|||.. .||||||||+|||+|++.
T Consensus 137 lGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~-- 214 (361)
T KOG1187|consen 137 LGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDF-- 214 (361)
T ss_pred EEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCC--
Confidence 99999988 5999999999 7999999853332677777778999999999999994 499999999999999999
Q ss_pred eEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCCC
Q 000316 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1678)
Q Consensus 316 ~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs~ 395 (1678)
..||+|||+|+..... ... . .+...||..|+|||.......+.++|++++| +..++.++||..
T Consensus 215 ~aKlsDFGLa~~~~~~-~~~----~-----~~~~~gt~gY~~PEy~~~g~lt~KsDVySFG-------VvllElitgr~~ 277 (361)
T KOG1187|consen 215 NAKLSDFGLAKLGPEG-DTS----V-----STTVMGTFGYLAPEYASTGKLTEKSDVYSFG-------VVLLELITGRKA 277 (361)
T ss_pred CEEccCccCcccCCcc-ccc----e-----eeecCCCCccCChhhhccCCcCcccccccch-------HHHHHHHhCCcc
Confidence 9999999999754420 000 0 0000488999999999998999999999999 777788999966
Q ss_pred CCC
Q 000316 396 GDY 398 (1678)
Q Consensus 396 ~dl 398 (1678)
-|.
T Consensus 278 ~d~ 280 (361)
T KOG1187|consen 278 VDQ 280 (361)
T ss_pred cCC
Confidence 554
No 307
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.94 E-value=1.1e-25 Score=261.50 Aligned_cols=140 Identities=19% Similarity=0.233 Sum_probs=121.4
Q ss_pred eeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH-HHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeCC
Q 000316 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 248 (1678)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~~ 248 (1678)
||.|+||.||++++. .++..+++|.+......... ...+. +|+.+++.++||||+++++.+..+.
T Consensus 1 lg~g~~~~vy~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~~~~~~~~~~ 66 (265)
T cd05579 1 ISKGAYGRVFLAKKK------STGDIYAIKVIKKADMIRKNQVDQVL--------TERDILSQAQSPYVVKLYYSFQGKK 66 (265)
T ss_pred CCCCCceEEEEEEEC------CCCCEEEEEEecchhhhhhhHHHHHH--------HHHHHHHhCCCcchhHHHHheecCc
Confidence 689999999999964 45789999998764332222 22232 8999999999999999999999999
Q ss_pred eEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCccc
Q 000316 249 LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1678)
Q Consensus 249 ~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~ 327 (1678)
..|+||||++| +|.+++.. ...+++..+..++.||+.||.|||++||+||||+|+||+++.++ .+||+|||++..
T Consensus 67 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~--~~~l~dfg~~~~ 142 (265)
T cd05579 67 NLYLVMEYLPGGDLASLLEN--VGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNG--HLKLTDFGLSKV 142 (265)
T ss_pred EEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCC--CEEEEecccchh
Confidence 99999999985 99999983 34789999999999999999999999999999999999999999 899999999863
No 308
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.94 E-value=2.8e-26 Score=276.92 Aligned_cols=184 Identities=17% Similarity=0.175 Sum_probs=152.6
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccceeeEEEe
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLKT 246 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~l~~~~~~ 246 (1678)
+.||+|+||.||+|++. .++..+|+|++.+.........+.+. +|+.++..+ +||||+++++++.+
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~~~~~~~~~~i~~~~~~~~~ 67 (327)
T cd05617 1 RVIGRGSYAKVLLVRLK------KNDQIYAMKVVKKELVHDDEDIDWVQ-------TEKHVFEQASSNPFLVGLHSCFQT 67 (327)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH-------HHHHHHHhhcCCCCEeeEEEEEEe
Confidence 47999999999999965 46789999999865333322223332 899999888 69999999999999
Q ss_pred CCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCc
Q 000316 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1678)
Q Consensus 247 ~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA 325 (1678)
.+.+|+||||++| +|..++. ..+.+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||++
T Consensus 68 ~~~~~lv~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~--~~kl~Dfg~~ 143 (327)
T cd05617 68 TSRLFLVIEYVNGGDLMFHMQ--RQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADG--HIKLTDYGMC 143 (327)
T ss_pred CCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCC--CEEEeccccc
Confidence 9999999999985 9998887 455789999999999999999999999999999999999999999 8999999999
Q ss_pred ccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+....... . .....||+.|+|||++.+..|+.++|+|+.|++.
T Consensus 144 ~~~~~~~~-----~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil 186 (327)
T cd05617 144 KEGLGPGD-----T------TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLM 186 (327)
T ss_pred eeccCCCC-----c------eecccCCcccCCHHHHCCCCCCchheeehhHHHH
Confidence 75321110 0 1112378999999999999999999999999554
No 309
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.94 E-value=9e-26 Score=289.12 Aligned_cols=175 Identities=17% Similarity=0.030 Sum_probs=117.7
Q ss_pred ccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccc
Q 000316 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1678)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV 238 (1678)
...++|++.++||+|+||.||+|++.... ...+..||+|++........ .. .| .++...+.+++
T Consensus 129 ~~~~~y~l~~~LG~G~FG~VYka~~~~~~--~~~~~~vAvK~~~~~~~~e~----~~--------~e--~l~~~~~~~~~ 192 (566)
T PLN03225 129 FKKDDFVLGKKLGEGAFGVVYKASLVNKQ--SKKEGKYVLKKATEYGAVEI----WM--------NE--RVRRACPNSCA 192 (566)
T ss_pred CccCCeEEeEEEeeCCCeEEEEEEEcCCc--cccCcEEEEEEecccchhHH----HH--------HH--HHHhhchhhHH
Confidence 34678999999999999999999965211 12378899999764321111 11 11 11122223333
Q ss_pred ceeeE------EEeCCeEEEeccCCCC-CHHHHHhhCCC------------------CCCCHHHHHHHHHHHHHHHHHHH
Q 000316 239 PVLGL------LKTSGLITSVIPKTPY-TLENILQFSPN------------------ALKSEWHVRFLMYQLLSAIAYLH 293 (1678)
Q Consensus 239 ~l~~~------~~~~~~~~lVmEy~~g-~L~~~l~~~~~------------------~~l~~~~i~~i~~qil~aL~yLH 293 (1678)
.+... ...+...++||||+++ +|.+++..... ....+..++.++.||+.||.|||
T Consensus 193 ~~~~~~~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH 272 (566)
T PLN03225 193 DFVYGFLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH 272 (566)
T ss_pred HHHHhhhcccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH
Confidence 33222 1345679999999995 99999873211 01123456789999999999999
Q ss_pred hCCceecCCCCCCeEecC-CCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccc
Q 000316 294 SLGIAHRSVCPSNVLLTD-SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 294 ~~gIiHRDLKP~NILl~~-~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 361 (1678)
++||+||||||+|||++. ++ .+||+|||+|+........ ......+++.|||||.+
T Consensus 273 ~~gIiHRDLKP~NILl~~~~~--~~KL~DFGlA~~l~~~~~~----------~~~~~~~t~~Y~APE~~ 329 (566)
T PLN03225 273 STGIVHRDVKPQNIIFSEGSG--SFKIIDLGAAADLRVGINY----------IPKEFLLDPRYAAPEQY 329 (566)
T ss_pred HCCEEeCcCCHHHEEEeCCCC--cEEEEeCCCcccccccccc----------CCcccccCCCccChHHh
Confidence 999999999999999986 46 8999999999854321110 01123468899999964
No 310
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.94 E-value=6e-25 Score=237.27 Aligned_cols=277 Identities=19% Similarity=0.278 Sum_probs=229.1
Q ss_pred EEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEE--EEecCCccEEEEeecCCCCc-E--EeCCCcE
Q 000316 1321 SSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVS--GYYGHEEVVNDICVLSSSGR-I--ASCDGTL 1395 (1678)
Q Consensus 1321 ~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~--~l~gH~~~V~sV~fs~~~~~-l--aS~DgtV 1395 (1678)
+.+++|...|.+|+|+.+|..+++|+. |+++++|+++.++.+. .++||++.|-.++|+|...- + +|+|++|
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~----dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~i 89 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSF----DKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTI 89 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeeccc----CCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceE
Confidence 667899999999999999999999996 9999999998876554 35799999999999886543 3 7789999
Q ss_pred EEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCC
Q 000316 1396 HVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNG 1475 (1678)
Q Consensus 1396 rIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~Dg 1475 (1678)
++||.++++++........ -..+.++|+|+++++++.|.
T Consensus 90 r~wd~r~~k~~~~i~~~~e-----------------------------------------ni~i~wsp~g~~~~~~~kdD 128 (313)
T KOG1407|consen 90 RIWDIRSGKCTARIETKGE-----------------------------------------NINITWSPDGEYIAVGNKDD 128 (313)
T ss_pred EEEEeccCcEEEEeeccCc-----------------------------------------ceEEEEcCCCCEEEEecCcc
Confidence 9999999999877653211 12356778899999999999
Q ss_pred cEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCC
Q 000316 1476 SLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDG 1555 (1678)
Q Consensus 1476 tVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~ 1555 (1678)
.|.+.|.++.+.+...+ +.-.++.++|.. +++++......|+|.|...-..+++.++++|..
T Consensus 129 ~it~id~r~~~~~~~~~-------~~~e~ne~~w~~-----------~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~s 190 (313)
T KOG1407|consen 129 RITFIDARTYKIVNEEQ-------FKFEVNEISWNN-----------SNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPS 190 (313)
T ss_pred cEEEEEecccceeehhc-------ccceeeeeeecC-----------CCCEEEEecCCceEEEEeccccccccccccCCc
Confidence 99999999988776554 344466677652 234566666679999999999999999999998
Q ss_pred CeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE--EEEecCCEEEEEeCCC-eEEEecCCCCCCCC
Q 000316 1556 YVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKSADEDG 1631 (1678)
Q Consensus 1556 ~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g 1631 (1678)
.+.||. +|+|++||+||.|..+.+||+..- .++..+..+.-+|. +||.||++||+||.|. |-|-++. .|
T Consensus 191 nCicI~f~p~GryfA~GsADAlvSLWD~~EL--iC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~ve-----tG 263 (313)
T KOG1407|consen 191 NCICIEFDPDGRYFATGSADALVSLWDVDEL--ICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVE-----TG 263 (313)
T ss_pred ceEEEEECCCCceEeeccccceeeccChhHh--hhheeeccccCceEEEEeccCcceeeccCccceEEeEecc-----cC
Confidence 888888 999999999999999999999876 67778888999999 6999999999999999 8887764 22
Q ss_pred cceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCC---------CcEEEc
Q 000316 1632 QHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTED---------GYLRLC 1677 (1678)
Q Consensus 1632 ~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~D---------G~IrIw 1677 (1678)
.++|... +.++...|+|+|...+||-+++| |+||++
T Consensus 264 ------d~~~eI~----~~~~t~tVAWHPk~~LLAyA~ddk~~d~~reag~vKiF 308 (313)
T KOG1407|consen 264 ------DRVWEIP----CEGPTFTVAWHPKRPLLAYACDDKDGDSNREAGTVKIF 308 (313)
T ss_pred ------CeEEEee----ccCCceeEEecCCCceeeEEecCCCCccccccceeEEe
Confidence 2555543 67899999999999999988775 567765
No 311
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.94 E-value=1.3e-25 Score=261.33 Aligned_cols=148 Identities=20% Similarity=0.194 Sum_probs=119.6
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEecc---CCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIE---GKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~---~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
+|.+.+.||+|+||.||++++.. .+..+++|.++. .........+.. +|+.+++.++||||++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~ 66 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKK------AVAEERLKVLKEIPVGELNPNETVQAN--------QEAQLLSKLDHPAIVK 66 (260)
T ss_pred CceeeeeecCCCCceEEEEEecC------CCCcceEEEeccccccccCcchHHHHH--------HHHHHHHhCCCCcHHH
Confidence 58999999999999999998642 233344444432 222222222222 7999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCCC-CHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCcee
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g-~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~ 316 (1678)
+++++.+....++||||+++ +|.+++.. .....+++..++.++.|++.||.|||++||+||||||+||+++.+ .
T Consensus 67 ~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~---~ 143 (260)
T cd08222 67 FHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNN---L 143 (260)
T ss_pred HHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeecC---C
Confidence 99999999999999999995 99988864 234568999999999999999999999999999999999999864 4
Q ss_pred EEEEecCCccc
Q 000316 317 LYICDKPLVGF 327 (1678)
Q Consensus 317 lKL~DFGlA~~ 327 (1678)
+||+|||+++.
T Consensus 144 ~~l~d~g~~~~ 154 (260)
T cd08222 144 LKIGDFGVSRL 154 (260)
T ss_pred EeecccCceee
Confidence 99999999863
No 312
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.94 E-value=2.7e-27 Score=277.09 Aligned_cols=213 Identities=15% Similarity=0.144 Sum_probs=176.4
Q ss_pred EeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEE
Q 000316 166 PIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLK 245 (1678)
Q Consensus 166 ~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~ 245 (1678)
-++-||.|+-|.||+|+ -.++.||||+++.-+ + .||+-|++|+|||||.+.|++.
T Consensus 128 ELeWlGSGaQGAVF~Gr--------l~netVAVKKV~elk---E--------------TdIKHLRkLkH~NII~FkGVCt 182 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGR--------LHNETVAVKKVRELK---E--------------TDIKHLRKLKHPNIITFKGVCT 182 (904)
T ss_pred hhhhhccCcccceeeee--------ccCceehhHHHhhhh---h--------------hhHHHHHhccCcceeeEeeeec
Confidence 47889999999999998 357889999985421 1 6888999999999999999999
Q ss_pred eCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
....+|||||||. |-|..+|+ .+..++......|..+|+.|+.|||.+.|||||||.-||||+.+. .|||+|||.
T Consensus 183 qsPcyCIiMEfCa~GqL~~VLk--a~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d--~VKIsDFGT 258 (904)
T KOG4721|consen 183 QSPCYCIIMEFCAQGQLYEVLK--AGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDD--VVKISDFGT 258 (904)
T ss_pred CCceeEEeeeccccccHHHHHh--ccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccc--eEEeccccc
Confidence 9999999999999 79999999 567788899999999999999999999999999999999999998 899999999
Q ss_pred cccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCC-CCCCcCCcc
Q 000316 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR-WGDYTFHMV 403 (1678)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs-~~dl~q~pv 403 (1678)
++.... ..+.+. +.||..|||||+++..+.+.++|+|++| +...+++.|.. |.|..+..|
T Consensus 259 S~e~~~------~STkMS------FaGTVaWMAPEvIrnePcsEKVDIwSfG-------VVLWEmLT~EiPYkdVdssAI 319 (904)
T KOG4721|consen 259 SKELSD------KSTKMS------FAGTVAWMAPEVIRNEPCSEKVDIWSFG-------VVLWEMLTGEIPYKDVDSSAI 319 (904)
T ss_pred hHhhhh------hhhhhh------hhhhHhhhCHHHhhcCCcccccceehhH-------HHHHHHHhcCCCccccchhee
Confidence 986442 122333 3389999999999999999999999999 55556666654 888888877
Q ss_pred cceEe-cCCCC--CCCCCCCcCccCCc
Q 000316 404 MPWVI-DFSTK--PDENFDSGSRDLSK 427 (1678)
Q Consensus 404 ~pwv~-d~~~~--~~~~~~~~~rdLsk 427 (1678)
+ |=. ..... -+...|..|+-|-|
T Consensus 320 I-wGVGsNsL~LpvPstcP~GfklL~K 345 (904)
T KOG4721|consen 320 I-WGVGSNSLHLPVPSTCPDGFKLLLK 345 (904)
T ss_pred E-EeccCCcccccCcccCchHHHHHHH
Confidence 6 333 33333 35567777776654
No 313
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.94 E-value=2.3e-25 Score=264.80 Aligned_cols=149 Identities=19% Similarity=0.226 Sum_probs=126.4
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
.++|++.+.||+|+||.||+|.+. .++..+|||.++..... ....+++ +|+.++... .||||++
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~avK~~~~~~~~-~~~~~~~--------~e~~~~~~~~~~~~i~~ 78 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFK------KTGHVMAVKQMRRTGNK-EENKRIL--------MDLDVVLKSHDCPYIVK 78 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEEC------CCCeEEEEEEEeccCCh-HHHHHHH--------HHHHHHHhccCCCchHh
Confidence 578999999999999999999964 35789999999754322 2233344 677766666 4999999
Q ss_pred eeeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
+++++.++...|+||||++++|.+++... ...+++..+..++.||+.||.|||+ +||+||||||+||+++.++ .+|
T Consensus 79 ~~~~~~~~~~~~~v~e~~~~~l~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~--~~k 155 (296)
T cd06618 79 CYGYFITDSDVFICMELMSTCLDKLLKRI-QGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASG--NVK 155 (296)
T ss_pred hheeeecCCeEEEEeeccCcCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCC--CEE
Confidence 99999999999999999998888888742 3478999999999999999999997 6999999999999999988 899
Q ss_pred EEecCCccc
Q 000316 319 ICDKPLVGF 327 (1678)
Q Consensus 319 L~DFGlA~~ 327 (1678)
|+|||+++.
T Consensus 156 L~dfg~~~~ 164 (296)
T cd06618 156 LCDFGISGR 164 (296)
T ss_pred ECccccchh
Confidence 999999863
No 314
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.94 E-value=6.4e-27 Score=284.50 Aligned_cols=191 Identities=17% Similarity=0.123 Sum_probs=158.9
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
..|..-+.||+|+||.||+++++ ++|..||||.+++.. .......+. +|+++|++++|||||+++
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnk------etG~~vAvK~~~~~~-~~r~~e~~~--------~EieilkKLnh~NIVk~f 77 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNK------ETGRLVAVKTFNKES-SLRPRERWC--------REIEILKKLNHPNIVKLF 77 (732)
T ss_pred cceeehhhhcCCccceeeeeccc------ccccchhHHhhhhhc-ccchHHHHH--------HHHHHHHHcCchhhhhhc
Confidence 35677899999999999999965 789999999998743 233333444 899999999999999999
Q ss_pred eEEEeCC------eEEEeccCCC-CCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecC--
Q 000316 242 GLLKTSG------LITSVIPKTP-YTLENILQFSP-NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD-- 311 (1678)
Q Consensus 242 ~~~~~~~------~~~lVmEy~~-g~L~~~l~~~~-~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~-- 311 (1678)
++-++.. ...+|||||. |+|..+++.-. ...+++.+++.++..++.||.|||++||+||||||.||++-.
T Consensus 78 ~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Ge 157 (732)
T KOG4250|consen 78 DIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGE 157 (732)
T ss_pred ccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecC
Confidence 9876544 5689999999 59999998633 346999999999999999999999999999999999999854
Q ss_pred CCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc-cccccccccccccCccc
Q 000316 312 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 312 ~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~y~~~~d~W~~G~is 379 (1678)
+|...-||+|||.||...... .....+||+.|.+||+.. +..|+..+|.|+.|++.
T Consensus 158 dgq~IyKLtDfG~Arel~d~s------------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~Gvtl 214 (732)
T KOG4250|consen 158 DGQSIYKLTDFGAARELDDNS------------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTL 214 (732)
T ss_pred CCceEEeeecccccccCCCCC------------eeeeecCchhhcChHHHhhccCcCceeehhhhhhHH
Confidence 344567999999999765322 234457999999999999 58899999999999654
No 315
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.93 E-value=2.1e-25 Score=264.95 Aligned_cols=142 Identities=19% Similarity=0.183 Sum_probs=122.6
Q ss_pred eeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeE
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1678)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~ 243 (1678)
|+...+||+|+||.||++... .++..+|+|.+.... ......+. +|+.+++.++||||+++++.
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~------~~~~~v~iK~~~~~~--~~~~~~~~--------~e~~~l~~l~h~~iv~~~~~ 85 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVK------SSGKLVAVKKMDLRK--QQRRELLF--------NEVVIMRDYQHENVVEMYNS 85 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEc------CCCeEEEEEEecccc--hhHHHHHH--------HHHHHHHhcCCcchhheeeE
Confidence 455678999999999999864 478899999985422 22223333 89999999999999999999
Q ss_pred EEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEec
Q 000316 244 LKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1678)
Q Consensus 244 ~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DF 322 (1678)
+...+..++||||+++ +|.+++. ...+++..++.++.|++.||+|||++||+||||||+||+++.++ .+||+||
T Consensus 86 ~~~~~~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~--~~~l~df 160 (292)
T cd06657 86 YLVGDELWVVMEFLEGGALTDIVT---HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDG--RVKLSDF 160 (292)
T ss_pred EEeCCEEEEEEecCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEccc
Confidence 9999999999999996 8888775 34578999999999999999999999999999999999999998 8999999
Q ss_pred CCcc
Q 000316 323 PLVG 326 (1678)
Q Consensus 323 GlA~ 326 (1678)
|++.
T Consensus 161 g~~~ 164 (292)
T cd06657 161 GFCA 164 (292)
T ss_pred ccce
Confidence 9876
No 316
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=3.9e-25 Score=242.29 Aligned_cols=333 Identities=17% Similarity=0.209 Sum_probs=234.2
Q ss_pred EEEEeCCCCEEEEeCCCceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEe
Q 000316 1301 LGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDIC 1380 (1678)
Q Consensus 1301 LasgS~D~~v~lWd~~~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~ 1380 (1678)
|++.=.|++++ ..+++.+.||.+.|+.|+.......+.++|. |.+.+||.+++|+|+.+|.||.+.|++|+
T Consensus 127 ivssFk~~t~~-----~~lvre~~GHkDGiW~Vaa~~tqpi~gtASA----DhTA~iWs~Esg~CL~~Y~GH~GSVNsik 197 (481)
T KOG0300|consen 127 IVSSFKDGTVK-----FRLVRELEGHKDGIWHVAADSTQPICGTASA----DHTARIWSLESGACLATYTGHTGSVNSIK 197 (481)
T ss_pred heeeecCCcee-----EeehhhhcccccceeeehhhcCCcceeeccc----ccceeEEeeccccceeeecccccceeeEE
Confidence 44444445543 2467889999999999999888889999998 99999999999999999999999999999
Q ss_pred ecCCCCcE--EeCCCcEEEEECCCC----ceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeee--c
Q 000316 1381 VLSSSGRI--ASCDGTLHVWNSQTG----KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAF--D 1452 (1678)
Q Consensus 1381 fs~~~~~l--aS~DgtVrIWD~~tg----~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f--~ 1452 (1678)
|++.+..+ +|+|++.+||...-. +.... ..|+.......+ ....... ..-...+++.-.+.-+.+ +
T Consensus 198 fh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~-~~hSsEeE~e~s--De~~~d~---d~~~~sD~~tiRvPl~~ltgH 271 (481)
T KOG0300|consen 198 FHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAP-SDHSSEEEEEHS--DEHNRDT---DSSEKSDGHTIRVPLMRLTGH 271 (481)
T ss_pred eccccceEEEccCCcchHHHHHhhcCcCCCCCCC-CCCCchhhhhcc--ccccccc---ccccccCCceeeeeeeeeecc
Confidence 99887776 788999999973211 10000 001100000000 0000000 000011112222222222 3
Q ss_pred CCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEec
Q 000316 1453 GNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLS 1532 (1678)
Q Consensus 1453 ~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~ 1532 (1678)
-..+.+..|...|++++++++|.+..+||+++|+.++.+.||.....|. +- -|...++++.+.
T Consensus 272 ~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHc------st-----------HptQrLVvTsSr 334 (481)
T KOG0300|consen 272 RAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHC------ST-----------HPTQRLVVTSSR 334 (481)
T ss_pred ccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhcccc------cc-----------CCcceEEEEecc
Confidence 3345666667779999999999999999999999999999987765432 11 145578999999
Q ss_pred CCeEEEEeCCCC-cEEEEEeccCCCeEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE--EEEecCCE
Q 000316 1533 SGQCRLFDVRSG-NVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQD 1609 (1678)
Q Consensus 1533 Dg~I~lWD~~tg-~~i~~l~gH~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~ 1609 (1678)
|.+.++||.+.. ..+..|+||...|+++....+..++|||.|.+|+|||+++.+ ..+.+++. ..+++ +++.-+..
T Consensus 335 DtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvKvWdLrNMR-splATIRt-dS~~NRvavs~g~~i 412 (481)
T KOG0300|consen 335 DTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDDRVVSGSDDRTVKVWDLRNMR-SPLATIRT-DSPANRVAVSKGHPI 412 (481)
T ss_pred CceeEeccchhhcceeeeecccccceeEEEEecCCceeecCCCceEEEeeecccc-Ccceeeec-CCccceeEeecCCce
Confidence 999999999853 467889999999999996666789999999999999999874 45566654 34444 57776778
Q ss_pred EEEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCC--EEEEEeCCCcEEEc
Q 000316 1610 VISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSR--LFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1610 LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~--lLatgs~DG~IrIw 1677 (1678)
++.--+++ |++||++. +- ...+-.. ..++|+..|++++|+.+.. -|.+||.|..+.=|
T Consensus 413 IAiPhDNRqvRlfDlnG------~R---laRlPrt-sRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW 473 (481)
T KOG0300|consen 413 IAIPHDNRQVRLFDLNG------NR---LARLPRT-SRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGW 473 (481)
T ss_pred EEeccCCceEEEEecCC------Cc---cccCCcc-cccccceeeeeeeccccCcccccccccccceeeee
Confidence 88888888 99999862 21 1111111 1236999999999996653 47799999988766
No 317
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=3.8e-27 Score=267.00 Aligned_cols=205 Identities=17% Similarity=0.135 Sum_probs=170.5
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
..+|..+.+||+|+||.|.+|..+ .+...+|||+++++-....+..+.. +.|-++|... +-|.+++
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerk------gtdELyAiKiLkKDViiQdDDvect-------m~EKrvLAL~~kppFL~q 414 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERK------GTDELYAIKILKKDVIIQDDDVECT-------MVEKRVLALPGKPPFLVQ 414 (683)
T ss_pred ecccceEEEeccCccceeeeeccc------CcchhhhhhhhccceeeecCcccce-------ehhhhheecCCCCchHHH
Confidence 458999999999999999999954 4678899999998755544333332 3788888877 4589999
Q ss_pred eeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
++.+|++-+.+|+||||+.| +|.-.|+ .-+.+.|..+.+|+.+|+-||-|||++|||.||||.+|||++.+| ++|
T Consensus 415 lHScFQTmDRLyFVMEyvnGGDLMyhiQ--Q~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eG--HiK 490 (683)
T KOG0696|consen 415 LHSCFQTMDRLYFVMEYVNGGDLMYHIQ--QVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEG--HIK 490 (683)
T ss_pred HHHHhhhhhheeeEEEEecCchhhhHHH--HhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCC--ceE
Confidence 99999999999999999995 9998888 567899999999999999999999999999999999999999999 999
Q ss_pred EEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCC
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1678)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs 394 (1678)
|+|||+++.+... ..+.++-| |||-|+|||++.-++|+..+|.|+.|.+. ||+|..-.+|.|..
T Consensus 491 i~DFGmcKEni~~-----~~TTkTFC------GTPdYiAPEIi~YqPYgksvDWWa~GVLL-yEmlaGQpPFdGeD 554 (683)
T KOG0696|consen 491 IADFGMCKENIFD-----GVTTKTFC------GTPDYIAPEIIAYQPYGKSVDWWAFGVLL-YEMLAGQPPFDGED 554 (683)
T ss_pred eeecccccccccC-----Ccceeeec------CCCcccccceEEecccccchhHHHHHHHH-HHHHcCCCCCCCCC
Confidence 9999999965522 22333334 79999999999999999999999999554 55555544444443
No 318
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.93 E-value=8.4e-26 Score=247.75 Aligned_cols=268 Identities=14% Similarity=0.220 Sum_probs=226.4
Q ss_pred ecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeE--------EeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEe
Q 000316 1289 PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILS--------SIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWE 1359 (1678)
Q Consensus 1289 fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~--------tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWD 1359 (1678)
|||||++ |++||.||-+-+||.. |+..+ .+.-|.++|.|++||.|...++||+. ||.|++|.
T Consensus 221 FSPDgqy-----LvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsq----DGkIKvWr 291 (508)
T KOG0275|consen 221 FSPDGQY-----LVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQ----DGKIKVWR 291 (508)
T ss_pred eCCCCce-----EeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCc----CCcEEEEE
Confidence 9999998 9999999999999977 54333 34468999999999999999999998 99999999
Q ss_pred CCCCeEEEEEe-cCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccc
Q 000316 1360 LTRINCVSGYY-GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGM 1436 (1678)
Q Consensus 1360 l~tg~~l~~l~-gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~ 1436 (1678)
+.+|.|++.|. +|+..|+|+.|+.++..+ +|.|.+||+.-+++|++++.+.+|+.
T Consensus 292 i~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsS---------------------- 349 (508)
T KOG0275|consen 292 IETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSS---------------------- 349 (508)
T ss_pred EecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccc----------------------
Confidence 99999999986 899999999999999888 66699999999999999999987742
Q ss_pred cccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccc
Q 000316 1437 LNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQ 1516 (1678)
Q Consensus 1437 ~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s 1516 (1678)
.++...++++|..+++++.||+|++|+..+++|+.+++.... ...|++|-.-|
T Consensus 350 ------------------yvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~----d~~vnsv~~~P----- 402 (508)
T KOG0275|consen 350 ------------------YVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGT----DYPVNSVILLP----- 402 (508)
T ss_pred ------------------cccceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCC----cccceeEEEcC-----
Confidence 244455677899999999999999999999999999986543 23466665543
Q ss_pred cCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEecc----CCCeEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCCeE
Q 000316 1517 AGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAH----DGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTV 1592 (1678)
Q Consensus 1517 ~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH----~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~ 1592 (1678)
.++..++++...++|++-++. |+.++++... ...|.++.+|.|.++.+.+.|+.++.+.+.+| ....+
T Consensus 403 -----Knpeh~iVCNrsntv~imn~q-GQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG--~LE~t 474 (508)
T KOG0275|consen 403 -----KNPEHFIVCNRSNTVYIMNMQ-GQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSG--KLERT 474 (508)
T ss_pred -----CCCceEEEEcCCCeEEEEecc-ceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecC--ceeee
Confidence 234678888899999999975 8888888632 23466666999999999999999999999998 44568
Q ss_pred eecCCCCEEE--EEecCCEEEEEeCCC-eEEEe
Q 000316 1593 FKGHTNGISG--FSVWGQDVISISNNK-IGLSS 1622 (1678)
Q Consensus 1593 l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwd 1622 (1678)
+..|...|.. -.|..+.+|+-+.|+ +++|.
T Consensus 475 l~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 475 LPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred eecccccccccccCcccchhhhhcccchhhhcC
Confidence 8888887774 678899999999999 99995
No 319
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.93 E-value=7.5e-26 Score=294.19 Aligned_cols=209 Identities=18% Similarity=0.136 Sum_probs=162.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH-HHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
+++|++.++||+|+||.||+|.+. .+++.||+|++......... ..++. +|+++++.++||||++
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d~------~tg~~VAIK~I~~~l~~~e~~~~rfl--------rEi~ILs~L~HPNIVk 66 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYDP------VCSRRVALKKIREDLSENPLLKKRFL--------REAKIAADLIHPGIVP 66 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEEC------CCCcEEEEEEECcccccCHHHHHHHH--------HHHHHHHhCCCcCcCe
Confidence 368999999999999999999965 46789999999764332222 23344 8999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCCC-CHHHHHhhCC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEe
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSP---------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~---------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl 309 (1678)
+++++.+++..|+||||++| +|.+++.... ...++...+..++.||+.||+|||++||+||||||+|||+
T Consensus 67 l~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILL 146 (932)
T PRK13184 67 VYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILL 146 (932)
T ss_pred EEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEE
Confidence 99999999999999999995 9999986311 1234566778899999999999999999999999999999
Q ss_pred cCCCceeEEEEecCCcccCCCCCccc--ccCC-----CCcceeecccccCcccccccccccccccccccccccCccchhh
Q 000316 310 TDSCWSWLYICDKPLVGFNSIADWCT--IPTS-----PMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFE 382 (1678)
Q Consensus 310 ~~~g~~~lKL~DFGlA~~~~~~~~~~--~~~~-----~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfe 382 (1678)
+.++ .+||+|||+|+......... .... ...........||+.|||||++.+..++.++|+|+.|++. |+
T Consensus 147 d~dg--~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVIL-yE 223 (932)
T PRK13184 147 GLFG--EVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVIL-YQ 223 (932)
T ss_pred cCCC--CEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHH-HH
Confidence 9999 89999999998652111000 0000 0000011123589999999999999999999999999665 44
Q ss_pred hHhh
Q 000316 383 YLLF 386 (1678)
Q Consensus 383 yL~~ 386 (1678)
.+++
T Consensus 224 LLTG 227 (932)
T PRK13184 224 MLTL 227 (932)
T ss_pred HHHC
Confidence 4443
No 320
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.93 E-value=5.4e-26 Score=274.75 Aligned_cols=181 Identities=18% Similarity=0.192 Sum_probs=146.6
Q ss_pred eeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh-HHHHHHHHhcCCCchhHHHhhccC---CCCcccceeeEEE
Q 000316 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCL---RHPNVAPVLGLLK 245 (1678)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~l~~~~~~~~~Ei~iL~~l---~HpNIV~l~~~~~ 245 (1678)
||+|+||+||+|+++ .++..||+|++.+..... ......+ +|..++..+ +||||+++++++.
T Consensus 1 lG~G~~g~Vy~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~p~i~~~~~~~~ 66 (330)
T cd05586 1 IGKGTFGQVYQVRKK------DTRRIYAMKVLSKKEIVAKKEVAHTI--------GERNILVRTLLDESPFIVGLKFSFQ 66 (330)
T ss_pred CCCCCceEEEEEEEC------CCCCEEEEEEEeHHHHhhhhHHHHHH--------HHHHHHHHhccCCCCcCcceEEEEe
Confidence 799999999999965 568899999986532221 1122222 677777665 6999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
+.+.+|+||||++| +|.+++. +...+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~--~~kl~Dfg~ 142 (330)
T cd05586 67 TDSDLYLVTDYMSGGELFWHLQ--KEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATG--HIALCDFGL 142 (330)
T ss_pred cCCeEEEEEcCCCCChHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC--CEEEecCCc
Confidence 99999999999985 9999987 456789999999999999999999999999999999999999999 899999999
Q ss_pred cccCCCCCcccccCCCCcceeecccccCcccccccccccc-cccccccccccCccc
Q 000316 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELS 379 (1678)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-~y~~~~d~W~~G~is 379 (1678)
++........ .....||+.|||||++.+. .|+.++|+|+.|++.
T Consensus 143 a~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil 187 (330)
T cd05586 143 SKANLTDNKT-----------TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLV 187 (330)
T ss_pred CcCCCCCCCC-----------ccCccCCccccCHHHHcCCCCCCCccceeccccEE
Confidence 9753211100 1112378999999988654 589999999999664
No 321
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.93 E-value=9.2e-25 Score=251.03 Aligned_cols=146 Identities=19% Similarity=0.259 Sum_probs=128.2
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|+..+.||+|++|.||++.+. .++..+++|++..... ....++. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~--~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 64 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHK------RTGKEVAIKVIKLESK--EKKEKII--------NEIQILKKCKHPNIVKYYG 64 (253)
T ss_pred CceeeeeeccCCceEEEEEEEC------CCCcEEEEEEecccch--hHHHHHH--------HHHHHHHhCCCCCEeEEEE
Confidence 4889999999999999999964 3678899999876432 2233343 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
.+..+...++++||++ ++|.+++... ...+++..+..++.|++.||.|||++|++||||||+||+++.++ .+||+|
T Consensus 65 ~~~~~~~~~l~~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~--~~~l~d 141 (253)
T cd05122 65 SYLKKDELWIVMEFCSGGSLKDLLKST-NQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDG--EVKLID 141 (253)
T ss_pred EEecCCeEEEEEecCCCCcHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCC--eEEEee
Confidence 9999999999999999 4999999842 25689999999999999999999999999999999999999988 899999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||.+..
T Consensus 142 ~~~~~~ 147 (253)
T cd05122 142 FGLSAQ 147 (253)
T ss_pred cccccc
Confidence 998864
No 322
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.93 E-value=1e-25 Score=268.94 Aligned_cols=199 Identities=16% Similarity=0.129 Sum_probs=157.3
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCC----------CccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLS----------GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG 230 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~----------~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~ 230 (1678)
.++|++.++||+|+||.||+|.+.-.. .....+..||+|.+... .......++. +|+++|+
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~--------~E~~~l~ 74 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPD-ANKNARNDFL--------KEVKILS 74 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCC-CCHHHHHHHH--------HHHHHHh
Confidence 467999999999999999999853211 01124568999998753 2233334454 8999999
Q ss_pred cCCCCcccceeeEEEeCCeEEEeccCCCC-CHHHHHhhCC-----------------CCCCCHHHHHHHHHHHHHHHHHH
Q 000316 231 CLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSP-----------------NALKSEWHVRFLMYQLLSAIAYL 292 (1678)
Q Consensus 231 ~l~HpNIV~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~-----------------~~~l~~~~i~~i~~qil~aL~yL 292 (1678)
.++||||+++++++.+.+..++||||+++ +|.+++.... ...++...+..++.||+.||.||
T Consensus 75 ~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l 154 (304)
T cd05096 75 RLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYL 154 (304)
T ss_pred hcCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999984 9999986421 12356778899999999999999
Q ss_pred HhCCceecCCCCCCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccc
Q 000316 293 HSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNR 372 (1678)
Q Consensus 293 H~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~ 372 (1678)
|++||+||||||+|||++.++ .+||+|||+++......... ......++..|||||++.+..++.++|+
T Consensus 155 H~~~ivH~dlkp~Nill~~~~--~~kl~DfG~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 223 (304)
T cd05096 155 SSLNFVHRDLATRNCLVGENL--TIKIADFGMSRNLYAGDYYR---------IQGRAVLPIRWMAWECILMGKFTTASDV 223 (304)
T ss_pred HHCCccccCcchhheEEcCCc--cEEECCCccceecccCceeE---------ecCcCCCCccccCHHHHhcCCCCchhhh
Confidence 999999999999999999998 89999999998543211100 1112335778999999988899999999
Q ss_pred cccCccc
Q 000316 373 WWRGELS 379 (1678)
Q Consensus 373 W~~G~is 379 (1678)
|+.|.+.
T Consensus 224 ~slG~~l 230 (304)
T cd05096 224 WAFGVTL 230 (304)
T ss_pred HHHHHHH
Confidence 9999664
No 323
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.93 E-value=1.8e-26 Score=272.18 Aligned_cols=196 Identities=14% Similarity=0.188 Sum_probs=164.0
Q ss_pred ccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC---CC
Q 000316 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR---HP 235 (1678)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~---Hp 235 (1678)
....+|..++.+|+|+||.|++|.++ ++..+|+||.|.+.+.-.....+-.+ +| +.--||+||..|+ |+
T Consensus 558 ~k~s~yttlq~lG~GAyGkV~lai~K------~n~~eVViK~I~KeRIL~DtWvrDrk-LG-tVp~EIqIla~l~~~sH~ 629 (772)
T KOG1152|consen 558 KKFSDYTTLQPLGEGAYGKVNLAIHK------ENNYEVVIKMIFKERILVDTWVRDRK-LG-TVPSEIQILATLNKHSHE 629 (772)
T ss_pred cccccceeeeeccccccceEEEeeec------ccceEEEeeehhhhhhhhhhhhcccc-cC-ccchhHHHHHHhhhcCcc
Confidence 34557999999999999999999986 56889999999887654432221111 22 2238999999997 99
Q ss_pred cccceeeEEEeCCeEEEeccCCC-C-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC
Q 000316 236 NVAPVLGLLKTSGLITSVIPKTP-Y-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 236 NIV~l~~~~~~~~~~~lVmEy~~-g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g 313 (1678)
||++++++|++++++||+||--. | ||+++|. ....++|.+++.|++|++.|+++||++||||||||-||+.++.+|
T Consensus 630 NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE--~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g 707 (772)
T KOG1152|consen 630 NILKLLDFFEDDDYYYLETEVHGEGIDLFDFIE--FKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNG 707 (772)
T ss_pred chhhhhheeecCCeeEEEecCCCCCcchhhhhh--ccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCC
Confidence 99999999999999999999776 6 9999999 456689999999999999999999999999999999999999999
Q ss_pred ceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccccccccc-ccccccccCccc
Q 000316 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWH-SQFNRWWRGELS 379 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~-~~~d~W~~G~is 379 (1678)
-+||+|||.|...... + ....+||..|+|||++.+.+|- ..-|+|..|.+.
T Consensus 708 --~~klidfgsaa~~ksg--------p-----fd~f~gtv~~aapevl~g~~y~gk~qdiwalgill 759 (772)
T KOG1152|consen 708 --FVKLIDFGSAAYTKSG--------P-----FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILL 759 (772)
T ss_pred --eEEEeeccchhhhcCC--------C-----cceeeeeccccchhhhCCCccCCCcchhhhhhhee
Confidence 8999999999865421 1 1224689999999999999994 578999999664
No 324
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.93 E-value=1.9e-24 Score=270.92 Aligned_cols=274 Identities=22% Similarity=0.341 Sum_probs=225.6
Q ss_pred EEecc-ccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEE-EecCCccEEEEeecCCCCcE--EeCCCcEE
Q 000316 1321 SSIRA-HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSG-YYGHEEVVNDICVLSSSGRI--ASCDGTLH 1396 (1678)
Q Consensus 1321 ~tl~g-H~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~-l~gH~~~V~sV~fs~~~~~l--aS~DgtVr 1396 (1678)
..+.+ |...|.+..|. +.++++|+. |+++++||..++..+.+ +.||.+.|.++++...+..+ +|.|+|++
T Consensus 201 ~~~~~~~~~~~~~~q~~--~~~~~~~s~----~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~r 274 (537)
T KOG0274|consen 201 KVLLGTDDHVVLCLQLH--DGFFKSGSD----DSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTER 274 (537)
T ss_pred eeecccCcchhhhheee--cCeEEecCC----CceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEE
Confidence 34444 56678888888 447888886 89999999999999888 99999999999996645555 66699999
Q ss_pred EEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCc
Q 000316 1397 VWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGS 1476 (1678)
Q Consensus 1397 IWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~Dgt 1476 (1678)
+||..+|+|..++.+|... +.++.. ....+++|+.|.+
T Consensus 275 vWd~~sg~C~~~l~gh~st------------------------------v~~~~~------------~~~~~~sgs~D~t 312 (537)
T KOG0274|consen 275 VWDCSTGECTHSLQGHTSS------------------------------VRCLTI------------DPFLLVSGSRDNT 312 (537)
T ss_pred eEecCCCcEEEEecCCCce------------------------------EEEEEc------------cCceEeeccCCce
Confidence 9999999999999876422 222222 2447788999999
Q ss_pred EEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCC
Q 000316 1477 LRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGY 1556 (1678)
Q Consensus 1477 VrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~ 1556 (1678)
|++||+.++.+++++.+| ...|+++... +.++++|+.||+|++||+.++++++++.||.+.
T Consensus 313 VkVW~v~n~~~l~l~~~h------~~~V~~v~~~-------------~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~ 373 (537)
T KOG0274|consen 313 VKVWDVTNGACLNLLRGH------TGPVNCVQLD-------------EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGR 373 (537)
T ss_pred EEEEeccCcceEEEeccc------cccEEEEEec-------------CCEEEEEecCceEEEEEhhhceeeeeecCCcce
Confidence 999999999999999864 4558888753 479999999999999999999999999999999
Q ss_pred eEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEEEEecCCEEEEEeCCC-eEEEecCCCCCCCCcce
Q 000316 1557 VTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNK-IGLSSLSKSADEDGQHR 1634 (1678)
Q Consensus 1557 V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~ 1634 (1678)
|.++. ... ..+++||.|++|++||+++.. +++.++.+|.+-|..+..+++.|++++.|+ |++||.. ++...
T Consensus 374 V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~-~c~~tl~~h~~~v~~l~~~~~~Lvs~~aD~~Ik~WD~~-----~~~~~ 446 (537)
T KOG0274|consen 374 VYSLIVDSE-NRLLSGSLDTTIKVWDLRTKR-KCIHTLQGHTSLVSSLLLRDNFLVSSSADGTIKLWDAE-----EGECL 446 (537)
T ss_pred EEEEEecCc-ceEEeeeeccceEeecCCchh-hhhhhhcCCcccccccccccceeEeccccccEEEeecc-----cCcee
Confidence 99997 433 899999999999999999874 677899999999999999999999999999 9999964 33221
Q ss_pred eccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1635 LVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1635 ~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
. ...+. |.+.|+.+++. ...+++++.||++++||
T Consensus 447 ~-------~~~~~-~~~~v~~l~~~--~~~il~s~~~~~~~l~d 480 (537)
T KOG0274|consen 447 R-------TLEGR-HVGGVSALALG--KEEILCSSDDGSVKLWD 480 (537)
T ss_pred e-------eeccC-CcccEEEeecC--cceEEEEecCCeeEEEe
Confidence 1 11221 56778888776 57888999999999996
No 325
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.93 E-value=5.8e-26 Score=271.14 Aligned_cols=196 Identities=16% Similarity=0.085 Sum_probs=160.2
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+..+...||+|+||+||+|++. -.||||+++......+..+.|. +|+.++++-+|.||+-++|
T Consensus 393 ev~l~~rIGsGsFGtV~Rg~wh---------GdVAVK~Lnv~~pt~~qlqaFK--------nEVa~lkkTRH~NIlLFMG 455 (678)
T KOG0193|consen 393 EVLLGERIGSGSFGTVYRGRWH---------GDVAVKLLNVDDPTPEQLQAFK--------NEVAVLKKTRHENILLFMG 455 (678)
T ss_pred Hhhccceeccccccceeecccc---------cceEEEEEecCCCCHHHHHHHH--------HHHHHHhhcchhhheeeeh
Confidence 5678999999999999999842 4599999998777777666666 9999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++..+.. .||.-+|+| +|+.+|+- .+..|.....+.|++||++|+.|||.++|||||||..||++.+++ .|||.|
T Consensus 456 ~~~~p~~-AIiTqwCeGsSLY~hlHv-~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~--kVkIgD 531 (678)
T KOG0193|consen 456 ACMNPPL-AIITQWCEGSSLYTHLHV-QETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDL--KVKIGD 531 (678)
T ss_pred hhcCCce-eeeehhccCchhhhhccc-hhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCC--cEEEec
Confidence 9998876 899999998 99999984 446688899999999999999999999999999999999999998 999999
Q ss_pred cCCcccCCCCCcccccCCCCcceeecccccCcccccccccc---cccccccccccccCccchhhhHhhhcc
Q 000316 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRGELSNFEYLLFLNK 389 (1678)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~---~~~y~~~~d~W~~G~isnfeyL~~ln~ 389 (1678)
||++.....-........ -.|...|||||+++ ..+|+..+|++++|.+. ||+++.--+
T Consensus 532 FGLatvk~~w~g~~q~~q---------p~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~-YELltg~lP 592 (678)
T KOG0193|consen 532 FGLATVKTRWSGEQQLEQ---------PHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVW-YELLTGELP 592 (678)
T ss_pred ccceeeeeeeccccccCC---------CccchhhhcHHHHhhcccCCCCcccchhhhhHHH-HHHHhCcCC
Confidence 999975332110000011 12556899999887 46789999999999554 555544333
No 326
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.93 E-value=2e-25 Score=279.54 Aligned_cols=189 Identities=20% Similarity=0.114 Sum_probs=158.0
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
....|.+.+.||+|+||.||+|.+. ..+..||||..... ... +|+++|+.++|||||+
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~------~~~~~vavK~~~~~--------~~~--------~E~~iL~~L~HpnIv~ 224 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHP------DYPQRVVVKAGWYA--------SSV--------HEARLLRRLSHPAVLA 224 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEEC------CCCCEEEEeccccc--------CHH--------HHHHHHHHCCCCCCCc
Confidence 3457999999999999999999965 45788999964221 122 8999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
+++++..++..++|||++.++|.+++.. ....++...++.++.||+.||.|||++||+||||||+||||+.++ .+||
T Consensus 225 l~~~~~~~~~~~lv~e~~~~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~--~vkL 301 (461)
T PHA03211 225 LLDVRVVGGLTCLVLPKYRSDLYTYLGA-RLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPE--DICL 301 (461)
T ss_pred EEEEEEECCEEEEEEEccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCC--CEEE
Confidence 9999999999999999999999999873 334689999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhh
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEY 383 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfey 383 (1678)
+|||+++......... ......||+.|||||++.+..++.++|+|+.|++. |+.
T Consensus 302 ~DFGla~~~~~~~~~~---------~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL-~El 355 (461)
T PHA03211 302 GDFGAACFARGSWSTP---------FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVI-FEA 355 (461)
T ss_pred cccCCceecccccccc---------cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHH-HHH
Confidence 9999998643211100 01123489999999999999999999999999765 443
No 327
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.93 E-value=1.1e-25 Score=276.76 Aligned_cols=197 Identities=18% Similarity=0.128 Sum_probs=157.4
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
.++|++.+.||+|+||.||+|++.. .+...++..||+|.++.... ......+. +|+.+|+.+ +|||||+
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~-~~~~~~~~~vavK~~~~~~~-~~~~~~~~--------~E~~il~~l~~h~nIv~ 106 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFG-LGKEDNVLRVAVKMLKASAH-TDEREALM--------SELKILSHLGQHKNIVN 106 (374)
T ss_pred HHHceehheecCCCcccEEEEEEec-CCcccccceeEEEeccCCCC-HHHHHHHH--------HHHHHHHhhccCCceee
Confidence 4579999999999999999998642 22334567899999975432 22223333 899999999 8999999
Q ss_pred eeeEEEeCCeEEEeccCCC-CCHHHHHhhCC-------------------------------------------------
Q 000316 240 VLGLLKTSGLITSVIPKTP-YTLENILQFSP------------------------------------------------- 269 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~------------------------------------------------- 269 (1678)
+++++.....+++|||||+ |+|.++++...
T Consensus 107 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (374)
T cd05106 107 LLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRP 186 (374)
T ss_pred EeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCC
Confidence 9999999999999999999 59999986321
Q ss_pred -------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCcccCCC
Q 000316 270 -------------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSI 330 (1678)
Q Consensus 270 -------------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~~~~ 330 (1678)
...++...++.++.||+.||.|||++||+||||||+|||+++++ .+||+|||+++....
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~--~~kL~DfGla~~~~~ 264 (374)
T cd05106 187 VSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGR--VAKICDFGLARDIMN 264 (374)
T ss_pred ccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCC--eEEEeeceeeeeccC
Confidence 12467888999999999999999999999999999999999988 899999999985432
Q ss_pred CCcccccCCCCcceeecccccCcccccccccccccccccccccccCcc
Q 000316 331 ADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1678)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~i 378 (1678)
.... .......++..|||||++.+..|+.+.|+|+.|++
T Consensus 265 ~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvi 303 (374)
T cd05106 265 DSNY---------VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 303 (374)
T ss_pred Ccce---------eeccCCCCccceeCHHHhcCCCCCccccHHHHHHH
Confidence 1100 01112235667999999999999999999999954
No 328
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=8.4e-26 Score=274.57 Aligned_cols=215 Identities=16% Similarity=0.110 Sum_probs=170.9
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccC-CcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEG-KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~-~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
+-.+.++||+|+||+||+|+-+...+. ....||+|..+.. ........+++ +|.++|+.++|||||++|
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~--~~~~VAvK~~k~~~~~~~~~~~e~m--------~EArvMr~l~H~NVVr~y 227 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGF--KVVPVAVKTTKGSSELTKEQIKEFM--------KEARVMRQLNHPNVVRFY 227 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCc--eeeeeEEEeecccccccHHHHHHHH--------HHHHHHHhCCCCCEEEEE
Confidence 455679999999999999996542110 1223899998752 24556666777 999999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
|+......+|||||+|.| +|.++|+..++ .++..+...++.+.+.||+|||++++|||||-.+|+|++.++ .+||+
T Consensus 228 GVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~--~vKIS 304 (474)
T KOG0194|consen 228 GVAVLEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKG--VVKIS 304 (474)
T ss_pred EEEcCCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCC--eEEeC
Confidence 999999999999999995 99999995333 589999999999999999999999999999999999999998 78999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhcccc-C-CCCCCC
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-G-RRWGDY 398 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~a-G-Rs~~dl 398 (1678)
|||+++........ ...+.-...|+|||.+...-|+.++|+|+.|.+. .+.++ | .+|..+
T Consensus 305 DFGLs~~~~~~~~~-----------~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~-------~Eif~~g~~Py~g~ 366 (474)
T KOG0194|consen 305 DFGLSRAGSQYVMK-----------KFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLL-------WEIFENGAEPYPGM 366 (474)
T ss_pred ccccccCCcceeec-----------cccccCcceecChhhhccCccccccchhheeeeE-------EeeeccCCCCCCCC
Confidence 99999864311100 1112235679999999999999999999999543 44444 2 256777
Q ss_pred cCCcccceEe
Q 000316 399 TFHMVMPWVI 408 (1678)
Q Consensus 399 ~q~pv~pwv~ 408 (1678)
..+-+-.||+
T Consensus 367 ~~~~v~~kI~ 376 (474)
T KOG0194|consen 367 KNYEVKAKIV 376 (474)
T ss_pred CHHHHHHHHH
Confidence 7777777885
No 329
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.93 E-value=1.4e-24 Score=263.36 Aligned_cols=280 Identities=17% Similarity=0.267 Sum_probs=230.9
Q ss_pred EEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcEEeC--CCcEEEE
Q 000316 1321 SSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVW 1398 (1678)
Q Consensus 1321 ~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~laS~--DgtVrIW 1398 (1678)
..++..+..|..++|+|.-..++++-- .|.|++||..-+.++..|.+|.++|..|+|+|....++|+ |-+|++|
T Consensus 3 tkfEskSsRvKglsFHP~rPwILtslH----sG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVW 78 (1202)
T KOG0292|consen 3 TKFESKSSRVKGLSFHPKRPWILTSLH----SGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVW 78 (1202)
T ss_pred chhhcccccccceecCCCCCEEEEeec----CceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEE
Confidence 345667788999999999999999985 7999999999999999999999999999999999999776 8999999
Q ss_pred ECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEE
Q 000316 1399 NSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLR 1478 (1678)
Q Consensus 1399 D~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVr 1478 (1678)
+..+.+|+.++.+|- ..|..+ .|++.-..++++|.|.|||
T Consensus 79 nYk~rrclftL~GHl------------------------------DYVRt~----------~FHheyPWIlSASDDQTIr 118 (1202)
T KOG0292|consen 79 NYKTRRCLFTLLGHL------------------------------DYVRTV----------FFHHEYPWILSASDDQTIR 118 (1202)
T ss_pred ecccceehhhhcccc------------------------------ceeEEe----------eccCCCceEEEccCCCeEE
Confidence 999999988887652 223444 4445577999999999999
Q ss_pred EEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCC--------C------
Q 000316 1479 FIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRS--------G------ 1544 (1678)
Q Consensus 1479 lWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~t--------g------ 1544 (1678)
||+..+++++..+.|| ...|.|-.|.|.. ..++++|-|.+|||||+.- |
T Consensus 119 IWNwqsr~~iavltGH------nHYVMcAqFhptE-----------DlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~ 181 (1202)
T KOG0292|consen 119 IWNWQSRKCIAVLTGH------NHYVMCAQFHPTE-----------DLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQM 181 (1202)
T ss_pred EEeccCCceEEEEecC------ceEEEeeccCCcc-----------ceEEEecccceEEEEeecchhccCCCCCCchhhh
Confidence 9999999999999965 4568887776433 5899999999999999842 1
Q ss_pred -------------c--EEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEE--EEec
Q 000316 1545 -------------N--VIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVW 1606 (1678)
Q Consensus 1545 -------------~--~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpd 1606 (1678)
. .-..+.||+..|+-++ +|.-.+++||+.|+.|++|.....+.-.+.+.+||.+.|.+ |+|.
T Consensus 182 ~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~ 261 (1202)
T KOG0292|consen 182 RGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPH 261 (1202)
T ss_pred hccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCc
Confidence 1 1234679999999999 99889999999999999999876543445688999999997 8999
Q ss_pred CCEEEEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEE
Q 000316 1607 GQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLR 1675 (1678)
Q Consensus 1607 g~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~Ir 1675 (1678)
...++|.|.|+ |+|||+..... ...++ +..+.-+.++.+|...+||+|-+.|.+-
T Consensus 262 q~lIlSnsEDksirVwDm~kRt~---------v~tfr-----rendRFW~laahP~lNLfAAgHDsGm~V 317 (1202)
T KOG0292|consen 262 QDLILSNSEDKSIRVWDMTKRTS---------VQTFR-----RENDRFWILAAHPELNLFAAGHDSGMIV 317 (1202)
T ss_pred cceeEecCCCccEEEEecccccc---------eeeee-----ccCCeEEEEEecCCcceeeeecCCceEE
Confidence 99999999999 99999863211 11121 2345678899999999999999888763
No 330
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.93 E-value=1.1e-24 Score=251.50 Aligned_cols=141 Identities=23% Similarity=0.264 Sum_probs=122.2
Q ss_pred eeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeCCe
Q 000316 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGL 249 (1678)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~~~ 249 (1678)
||+|+||.||++.+. .++..+|+|.+.+............. +|+.+++.++||||+++++.+..+..
T Consensus 1 lg~G~~~~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~~-------~e~~~l~~l~h~~i~~~~~~~~~~~~ 67 (250)
T cd05123 1 LGKGSFGKVLLVRKK------DTGKLYAMKVLKKKKIIKRKEVEHTL-------TERNILSRINHPFIVKLHYAFQTEEK 67 (250)
T ss_pred CCCCCceEEEEEEEC------CCCcEEEEEEeehhhhcchHHHHHHH-------HHHHHHHHcCCCcHHHHHHHeecCCe
Confidence 699999999999964 36789999998765443322222222 89999999999999999999999999
Q ss_pred EEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCccc
Q 000316 250 ITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1678)
Q Consensus 250 ~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~ 327 (1678)
.|+||||++ ++|.+++.. ...+++..+..++.|++.||.|||+++++|+||||+||+++.++ .++|+|||++..
T Consensus 68 ~~~v~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~--~~~l~d~~~~~~ 142 (250)
T cd05123 68 LYLVLEYAPGGELFSHLSK--EGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADG--HIKLTDFGLAKE 142 (250)
T ss_pred eEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCC--cEEEeecCccee
Confidence 999999996 599999983 44689999999999999999999999999999999999999999 899999999874
No 331
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.93 E-value=1.2e-25 Score=262.83 Aligned_cols=194 Identities=15% Similarity=0.170 Sum_probs=158.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++.+.||+|+||.||+|..+.. ...+..||+|.++... .......+. +|+.+++.++||||+++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~---~~~~~~vaik~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~iv~~ 71 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLP---SKRELPVAIHTLRAGC-SDKQRRGFL--------AEALTLGQFDHSNIVRL 71 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecC---CCceeeEEEEecCCCC-CHHHHHHHH--------HHHHHHhcCCCCCcCeE
Confidence 35799999999999999999986431 2456889999987642 223333444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++..++..++||||+++ +|.+++.. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+|+
T Consensus 72 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~--~~~l 148 (266)
T cd05064 72 EGVITRGNTMMIVTEYMSNGALDSFLRK-HEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDL--VCKI 148 (266)
T ss_pred EEEEecCCCcEEEEEeCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCC--cEEE
Confidence 9999999999999999995 99999874 245689999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||.+......... . .....++..|+|||++.+..++.++|+|+.|++.
T Consensus 149 ~dfg~~~~~~~~~~~----~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 198 (266)
T cd05064 149 SGFRRLQEDKSEAIY----T------TMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVM 198 (266)
T ss_pred CCCcccccccccchh----c------ccCCCCceeecCHHHHhhCCccchhHHHHHHHHH
Confidence 999987653211000 0 0011245689999999999999999999999664
No 332
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.93 E-value=1.6e-24 Score=271.04 Aligned_cols=189 Identities=17% Similarity=0.079 Sum_probs=131.5
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCC----------CccccceEEEEEEeccCCcChHHHHHHHHh------cCCCch
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLS----------GCLEDCVLGSLNLLIEGKASGQESKNFLRL------IGVPSF 223 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~----------~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~------~~~~~~ 223 (1678)
..++|++.++||+|+||+||+|...-.. .....++.||||.+..... ....+|++. .....+
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~--~~~~~fl~e~~~~~~~~e~~~ 220 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQ--GVRQDFLKTGTLAKGSAETGM 220 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccch--hhHHHHHhhhhhhhcccchhH
Confidence 4678999999999999999999742100 1113457899999865321 122233310 111234
Q ss_pred hHHHhhccCCCCcc-----cceeeEEEe--------CCeEEEeccCCC-CCHHHHHhhCC--------------------
Q 000316 224 DESSVPGCLRHPNV-----APVLGLLKT--------SGLITSVIPKTP-YTLENILQFSP-------------------- 269 (1678)
Q Consensus 224 ~Ei~iL~~l~HpNI-----V~l~~~~~~--------~~~~~lVmEy~~-g~L~~~l~~~~-------------------- 269 (1678)
.|+.++.+++|.|+ ++++++|.. ++..++||||++ ++|.++++...
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 67788888876554 677777653 346899999999 49999886321
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeec
Q 000316 270 --NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIE 347 (1678)
Q Consensus 270 --~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~ 347 (1678)
...++...++.++.|++.||.|||+++|+||||||+|||++.++ .+||+|||+++....... ....
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~--~~kL~DFGla~~~~~~~~----~~~~------ 368 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDG--QVKIIDFGAAVDMCTGIN----FNPL------ 368 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCC--cEEEEeCcCccccccCCc----cCcc------
Confidence 11234567888999999999999999999999999999999998 899999999975331110 0000
Q ss_pred ccccCcccccccccc
Q 000316 348 GCSSQGLYADLKLSQ 362 (1678)
Q Consensus 348 ~~~gt~~Y~APE~~~ 362 (1678)
...+|+.|+|||++.
T Consensus 369 ~g~~tp~Y~aPE~l~ 383 (507)
T PLN03224 369 YGMLDPRYSPPEELV 383 (507)
T ss_pred ccCCCcceeChhhhc
Confidence 112478899999864
No 333
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.92 E-value=2.6e-25 Score=273.67 Aligned_cols=198 Identities=17% Similarity=0.106 Sum_probs=156.7
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
.++|++.++||+|+||.||+|+... .....++..||+|+++.... ......+. +|+.+|+.+ +|||||+
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~-~~~~~~~~~vavK~l~~~~~-~~~~~~~~--------~Ei~il~~l~~HpnIv~ 103 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYG-LFKSDAAMTVAVKMLKPSAH-LTEREALM--------SELKVLSYLGNHINIVN 103 (375)
T ss_pred hHHeehhheecCCccceEEEEEEec-cccCccceeEEEEeccCCcC-cHHHHHHH--------HHHHHHHHhcCCcceee
Confidence 4479999999999999999997421 11224567899999875322 22223333 899999999 8999999
Q ss_pred eeeEEEeCCeEEEeccCCC-CCHHHHHhhCC-------------------------------------------------
Q 000316 240 VLGLLKTSGLITSVIPKTP-YTLENILQFSP------------------------------------------------- 269 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~------------------------------------------------- 269 (1678)
+++++.+.+..++|||||+ |+|.++++...
T Consensus 104 l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 183 (375)
T cd05104 104 LLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKA 183 (375)
T ss_pred eeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccc
Confidence 9999999999999999999 59999986421
Q ss_pred ------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCc
Q 000316 270 ------------------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1678)
Q Consensus 270 ------------------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA 325 (1678)
...++...+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~--~~kl~DfG~a 261 (375)
T cd05104 184 DKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGR--ITKICDFGLA 261 (375)
T ss_pred ccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCC--cEEEecCccc
Confidence 12467788899999999999999999999999999999999988 8999999999
Q ss_pred ccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+......... ......++..|+|||++.+..++.++|+|+.|++.
T Consensus 262 ~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l 306 (375)
T cd05104 262 RDIRNDSNYV---------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILL 306 (375)
T ss_pred eeccCccccc---------ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHH
Confidence 8543211110 01112346679999999999999999999999654
No 334
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.92 E-value=4.8e-24 Score=240.52 Aligned_cols=276 Identities=20% Similarity=0.274 Sum_probs=215.7
Q ss_pred ccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCc---E--EeCCCcEEEEEC
Q 000316 1326 HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGR---I--ASCDGTLHVWNS 1400 (1678)
Q Consensus 1326 H~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~---l--aS~DgtVrIWD~ 1400 (1678)
|.+.|.+|... ++.|+||+ |||++|+||.. |++..++.||+++|.+++|...+.. + ||.|.++++|..
T Consensus 104 hdDWVSsv~~~--~~~Iltgs----YDg~~riWd~~-Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~ 176 (423)
T KOG0313|consen 104 HDDWVSSVKGA--SKWILTGS----YDGTSRIWDLK-GKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKW 176 (423)
T ss_pred chhhhhhhccc--CceEEEee----cCCeeEEEecC-CceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEe
Confidence 89999999888 77999999 59999999975 8999999999999999998654443 4 666999999998
Q ss_pred CCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEE
Q 000316 1401 QTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFI 1480 (1678)
Q Consensus 1401 ~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlW 1480 (1678)
+.++..-.... ...+|... |.++++.++|..+++|+.|.+|++|
T Consensus 177 ~~~~~~~~~~~--------------------------~~~GHk~~----------V~sVsv~~sgtr~~SgS~D~~lkiW 220 (423)
T KOG0313|consen 177 NVGENKVKALK--------------------------VCRGHKRS----------VDSVSVDSSGTRFCSGSWDTMLKIW 220 (423)
T ss_pred cCchhhhhHHh--------------------------Hhcccccc----------eeEEEecCCCCeEEeecccceeeec
Confidence 87754321110 00123333 5566666789999999999999999
Q ss_pred ECCCC-------------------------eeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCe
Q 000316 1481 DINQG-------------------------QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQ 1535 (1678)
Q Consensus 1481 Dl~tg-------------------------~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~ 1535 (1678)
+..+. .++-++. +|...|.+|-|+. ...+++++.|.+
T Consensus 221 s~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~------GHt~~Vs~V~w~d------------~~v~yS~SwDHT 282 (423)
T KOG0313|consen 221 SVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLE------GHTEPVSSVVWSD------------ATVIYSVSWDHT 282 (423)
T ss_pred ccCCCccccccccchhhhhhhhhhhcccccCceEEec------ccccceeeEEEcC------------CCceEeecccce
Confidence 93211 1222233 5666788888853 357899999999
Q ss_pred EEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCC-CCeEeecCCCCEEE--EEecC-CEE
Q 000316 1536 CRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPS-QPTVFKGHTNGISG--FSVWG-QDV 1610 (1678)
Q Consensus 1536 I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~-~~~~l~gH~~~V~a--fSpdg-~~L 1610 (1678)
|+.||+.+|..+.++.+ ...++++. ++..++|++||.|..|++||.+++... ...++.||++.|.+ ++|.. .+|
T Consensus 283 Ik~WDletg~~~~~~~~-~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~ 361 (423)
T KOG0313|consen 283 IKVWDLETGGLKSTLTT-NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQL 361 (423)
T ss_pred EEEEEeecccceeeeec-CcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEE
Confidence 99999999999988885 56789999 899999999999999999999986433 33589999999996 77765 458
Q ss_pred EEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1611 ISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1611 aSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
+||+.|+ +++||+... ...+|... +|...|.++.|+ ++..+++||.|++|+|+
T Consensus 362 ~S~S~D~t~klWDvRS~----------k~plydI~---~h~DKvl~vdW~-~~~~IvSGGaD~~l~i~ 415 (423)
T KOG0313|consen 362 VSGSYDNTVKLWDVRST----------KAPLYDIA---GHNDKVLSVDWN-EGGLIVSGGADNKLRIF 415 (423)
T ss_pred EEEecCCeEEEEEeccC----------CCcceeec---cCCceEEEEecc-CCceEEeccCcceEEEe
Confidence 9999999 999998522 11344433 588999999996 67789999999999986
No 335
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.92 E-value=8.7e-25 Score=233.97 Aligned_cols=277 Identities=17% Similarity=0.269 Sum_probs=221.7
Q ss_pred EEeccccccEEEEEEec---CCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcE
Q 000316 1321 SSIRAHHGALRSVAVGQ---DECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTL 1395 (1678)
Q Consensus 1321 ~tl~gH~~~V~svafsp---dg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtV 1395 (1678)
.+-.||+.+|-.++||| +|-+|+|++. |+.--+=+-+||..+.+|.||.+.|++.+...+..+. ++.|-+-
T Consensus 8 l~c~ghtrpvvdl~~s~itp~g~flisa~k----d~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadfta 83 (334)
T KOG0278|consen 8 LTCHGHTRPVVDLAFSPITPDGYFLISASK----DGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTA 83 (334)
T ss_pred eEEcCCCcceeEEeccCCCCCceEEEEecc----CCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchh
Confidence 45679999999999985 8889999998 8887787888999999999999999999986655555 4559999
Q ss_pred EEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCC
Q 000316 1396 HVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNG 1475 (1678)
Q Consensus 1396 rIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~Dg 1475 (1678)
++||.-+|..+.+|.. .+.|..++|+.|.++|++|+.++
T Consensus 84 kvw~a~tgdelhsf~h-----------------------------------------khivk~~af~~ds~~lltgg~ek 122 (334)
T KOG0278|consen 84 KVWDAVTGDELHSFEH-----------------------------------------KHIVKAVAFSQDSNYLLTGGQEK 122 (334)
T ss_pred hhhhhhhhhhhhhhhh-----------------------------------------hheeeeEEecccchhhhccchHH
Confidence 9999999998877763 23466777778899999999999
Q ss_pred cEEEEECCCCe-eeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccC
Q 000316 1476 SLRFIDINQGQ-KLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHD 1554 (1678)
Q Consensus 1476 tVrlWDl~tg~-~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~ 1554 (1678)
.+|++|++..+ +...+.+ |+..|+.+-||... +.+++.+.|++||+||.++|+.++++. -.
T Consensus 123 llrvfdln~p~App~E~~g------htg~Ir~v~wc~eD-----------~~iLSSadd~tVRLWD~rTgt~v~sL~-~~ 184 (334)
T KOG0278|consen 123 LLRVFDLNRPKAPPKEISG------HTGGIRTVLWCHED-----------KCILSSADDKTVRLWDHRTGTEVQSLE-FN 184 (334)
T ss_pred HhhhhhccCCCCCchhhcC------CCCcceeEEEeccC-----------ceEEeeccCCceEEEEeccCcEEEEEe-cC
Confidence 99999998753 3444554 45568888887543 578888999999999999999999998 46
Q ss_pred CCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE--EEEecCCEEEEEeCCC-eEEEecCCCCCCC
Q 000316 1555 GYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKSADED 1630 (1678)
Q Consensus 1555 ~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~~~~~~ 1630 (1678)
.+|+++. +++|++|. -+..++|+.||..+- ..+..++... .|. +++|+...++.|+.|. ++.||....
T Consensus 185 s~VtSlEvs~dG~ilT-ia~gssV~Fwdaksf--~~lKs~k~P~-nV~SASL~P~k~~fVaGged~~~~kfDy~Tg---- 256 (334)
T KOG0278|consen 185 SPVTSLEVSQDGRILT-IAYGSSVKFWDAKSF--GLLKSYKMPC-NVESASLHPKKEFFVAGGEDFKVYKFDYNTG---- 256 (334)
T ss_pred CCCcceeeccCCCEEE-EecCceeEEeccccc--cceeeccCcc-ccccccccCCCceEEecCcceEEEEEeccCC----
Confidence 7899999 88887654 456789999999875 3333333322 233 4999999999999999 999998622
Q ss_pred CcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1631 GQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1631 g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
.. +-... .+|-++|.++.|+|||..-|+||+||+||||
T Consensus 257 -eE------i~~~n--kgh~gpVhcVrFSPdGE~yAsGSEDGTirlW 294 (334)
T KOG0278|consen 257 -EE------IGSYN--KGHFGPVHCVRFSPDGELYASGSEDGTIRLW 294 (334)
T ss_pred -ce------eeecc--cCCCCceEEEEECCCCceeeccCCCceEEEE
Confidence 11 11111 2588999999999999999999999999999
No 336
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.92 E-value=3.1e-25 Score=257.27 Aligned_cols=187 Identities=21% Similarity=0.288 Sum_probs=159.0
Q ss_pred eeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeE
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1678)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~ 243 (1678)
|++++.||+|+||.||++++. .++..+|+|.+.............. +|+.+++.++||||++++++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~------~~~~~~~~K~~~~~~~~~~~~~~~~--------~e~~~~~~l~~~~i~~~~~~ 66 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNK------KNGQKVAVKIIDKSEIEEEEREENI--------REIKILRRLRHPNIVQILDV 66 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEET------TTTEEEEEEEEESTTHHHHHHHHHH--------HHHHHHHHHTBTTBCHEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEEC------CCCeEEEEEEeccccccccccchhh--------hhhhcccccccccccccccc
Confidence 899999999999999999975 5778999999987543333322333 79999999999999999999
Q ss_pred EEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEec
Q 000316 244 LKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1678)
Q Consensus 244 ~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DF 322 (1678)
+.+....++||||+++ +|.+++. ....+++..+..++.||+.||.+||++||+||||||+||+++.++ .+||+||
T Consensus 67 ~~~~~~~~~v~~~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~--~~~l~Df 142 (260)
T PF00069_consen 67 FQDDNYLYIVMEYCPGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENG--EVKLIDF 142 (260)
T ss_dssp EEESSEEEEEEEEETTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTS--EEEESSG
T ss_pred cccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccc--ccccccc
Confidence 9999999999999997 9999998 466789999999999999999999999999999999999999988 8999999
Q ss_pred CCcccCCCCCcccccCCCCcceeecccccCcccccccccc-cccccccccccccCccc
Q 000316 323 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 323 GlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~y~~~~d~W~~G~is 379 (1678)
|.+........ ......++..|+|||++. +..++.++|+|+.|.+.
T Consensus 143 g~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il 189 (260)
T PF00069_consen 143 GSSVKLSENNE-----------NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIIL 189 (260)
T ss_dssp TTTEESTSTTS-----------EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHH
T ss_pred ccccccccccc-----------cccccccccccccccccccccccccccccccccccc
Confidence 99975311000 112234788999999998 88899999999999653
No 337
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.92 E-value=2.6e-25 Score=252.88 Aligned_cols=284 Identities=22% Similarity=0.215 Sum_probs=227.0
Q ss_pred ceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCe--EEEEEecCCccEEEEeecCCCCcE--EeCCC
Q 000316 1318 SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN--CVSGYYGHEEVVNDICVLSSSGRI--ASCDG 1393 (1678)
Q Consensus 1318 ~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~--~l~~l~gH~~~V~sV~fs~~~~~l--aS~Dg 1393 (1678)
.....+..|.+.|..+.|.++...|++||. |..|++|++..++ .+.++.|..+.|++++|.+++..+ +|.|+
T Consensus 166 ~~~~~ld~h~gev~~v~~l~~sdtlatgg~----Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~ 241 (459)
T KOG0288|consen 166 RALFVLDAHEGEVHDVEFLRNSDTLATGGS----DRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDK 241 (459)
T ss_pred hhhhhhhccccccceeEEccCcchhhhcch----hhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCC
Confidence 456678889999999999999999999997 9999999987766 677889999999999999998887 56699
Q ss_pred cEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEEC
Q 000316 1394 TLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIG 1473 (1678)
Q Consensus 1394 tVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~ 1473 (1678)
++++|++...+...++.+|. .. ++++.+......+++|+.
T Consensus 242 ~~r~Wnvd~~r~~~TLsGHt------------------------------dk----------Vt~ak~~~~~~~vVsgs~ 281 (459)
T KOG0288|consen 242 NLRLWNVDSLRLRHTLSGHT------------------------------DK----------VTAAKFKLSHSRVVSGSA 281 (459)
T ss_pred ceeeeeccchhhhhhhcccc------------------------------cc----------eeeehhhccccceeeccc
Confidence 99999999999888887753 22 444444444555999999
Q ss_pred CCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEecc
Q 000316 1474 NGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAH 1553 (1678)
Q Consensus 1474 DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH 1553 (1678)
|.+||+||+..+.|.++.-. .+.+..|+.. +..+++|..|++||+||.+++.+......|
T Consensus 282 DRtiK~WDl~k~~C~kt~l~-------~S~cnDI~~~-------------~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~g 341 (459)
T KOG0288|consen 282 DRTIKLWDLQKAYCSKTVLP-------GSQCNDIVCS-------------ISDVISGHFDKKVRFWDIRSADKTRSVPLG 341 (459)
T ss_pred cchhhhhhhhhhheeccccc-------cccccceEec-------------ceeeeecccccceEEEeccCCceeeEeecC
Confidence 99999999999888776542 3334555542 257899999999999999999999999977
Q ss_pred CCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeec----CCCCEEEEEecCCEEEEEeCCC-eEEEecCCCC
Q 000316 1554 DGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKG----HTNGISGFSVWGQDVISISNNK-IGLSSLSKSA 1627 (1678)
Q Consensus 1554 ~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~g----H~~~V~afSpdg~~LaSgs~D~-I~vwdl~~~~ 1627 (1678)
. .|++|. +.+|..|.|++.|.++.+.|+++......+.-.+ |.-.-..|||++.++++||.|+ |+||++..
T Consensus 342 g-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~t-- 418 (459)
T KOG0288|consen 342 G-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFT-- 418 (459)
T ss_pred c-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccC--
Confidence 5 899999 9999999999999999999999874333332222 2211114999999999999999 99999751
Q ss_pred CCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1628 DEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1628 ~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
+|+............|++++|+|.|..|++++.++.+.+|-
T Consensus 419 ----------gKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 419 ----------GKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred ----------ceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 23333333322233799999999999999999999999994
No 338
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.92 E-value=2.7e-26 Score=252.95 Aligned_cols=191 Identities=18% Similarity=0.184 Sum_probs=157.1
Q ss_pred cccccCCCeeE-eeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-C
Q 000316 156 SCSRIMTALFP-IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-R 233 (1678)
Q Consensus 156 ~~~~~~~~y~~-~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~ 233 (1678)
....+.++|.+ -++||-|-.|.|..|.++ .++..+|+|++.... . . -||+++.-.. .
T Consensus 55 k~~~itedY~is~qvLG~GinGkV~~C~~k------~T~ekfALKvL~Ds~---K----A--------RrEVeLHw~~s~ 113 (400)
T KOG0604|consen 55 KEYSITEDYSISWQVLGAGINGKVVQCVHK------RTQEKFALKVLLDSP---K----A--------RREVELHWMASG 113 (400)
T ss_pred hcccchhhheehhhhhccccCCceEEEEec------cchhhhHHHHHhcCH---H----H--------HhHhhhhhhhcC
Confidence 34445778887 578999999999999976 688999999985321 1 1 1788876555 6
Q ss_pred CCcccceeeEEEe----CCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeE
Q 000316 234 HPNVAPVLGLLKT----SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVL 308 (1678)
Q Consensus 234 HpNIV~l~~~~~~----~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NIL 308 (1678)
|||||.++++|+. ...+.+|||+|+| +|+..|+....+.|+|.++..|++||+.|+.|||+.+|.||||||||+|
T Consensus 114 h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLL 193 (400)
T KOG0604|consen 114 HPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLL 193 (400)
T ss_pred CCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhhee
Confidence 9999999999864 3478899999995 9999999777778999999999999999999999999999999999999
Q ss_pred ecCCCc-eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 309 LTDSCW-SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 309 l~~~g~-~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
....+. ..+||+|||+|+.... ....++.| -||+|.|||++....|+..+|+|+.|.|.
T Consensus 194 yt~t~~na~lKLtDfGFAK~t~~------~~~L~TPc------~TPyYvaPevlg~eKydkscdmwSlgVim 253 (400)
T KOG0604|consen 194 YTTTSPNAPLKLTDFGFAKETQE------PGDLMTPC------FTPYYVAPEVLGPEKYDKSCDMWSLGVIM 253 (400)
T ss_pred eecCCCCcceEecccccccccCC------CccccCCc------ccccccCHHHhCchhcCCCCCccchhHHH
Confidence 986543 3899999999996442 12222333 38999999999999999999999999664
No 339
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.92 E-value=1.2e-23 Score=227.64 Aligned_cols=286 Identities=16% Similarity=0.170 Sum_probs=222.5
Q ss_pred cccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeC-CCceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCe
Q 000316 1278 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKI-KASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGT 1354 (1678)
Q Consensus 1278 ~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~-~~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~Dgt 1354 (1678)
-+.||+-.+.- ++.+|.+ |.||+.|.+..+|-. +|+.+.+++||+++|+|++.+-+.+.++|||. |.+
T Consensus 5 ~l~GHERplTqiKyN~eGDL-----lFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSA----D~t 75 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDL-----LFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSA----DQT 75 (327)
T ss_pred ccccCccccceEEecCCCcE-----EEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccc----cce
Confidence 35567777764 8888887 999999999999986 69999999999999999999999999999998 999
Q ss_pred EEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE-EeCC------CcEEEEECCCCceeEEecccCccccccCCCCCCcc
Q 000316 1355 VQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASCD------GTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSIS 1427 (1678)
Q Consensus 1355 VrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l-aS~D------gtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~ 1427 (1678)
++|||+++|+++.+++ ...+|..+.|+.++.++ ++.| +.|.++|++....- ...
T Consensus 76 ~kLWDv~tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~--~~s---------------- 136 (327)
T KOG0643|consen 76 AKLWDVETGKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSD--IDS---------------- 136 (327)
T ss_pred eEEEEcCCCcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhh--hcc----------------
Confidence 9999999999999988 67889999999988876 4443 56889988743210 000
Q ss_pred ccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeE-EeeCCCCcccCCCcceE
Q 000316 1428 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLH-LWRGEPTELGFPSLVSA 1506 (1678)
Q Consensus 1428 ~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~-~l~~~~~~v~~~~~V~s 1506 (1678)
..++..+.-..+.++.+-|.|.++.+++|..||.|..||+++|..+. .-+. |...|+.
T Consensus 137 ---------------~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~------h~~~Ind 195 (327)
T KOG0643|consen 137 ---------------EEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEE------HSSKIND 195 (327)
T ss_pred ---------------cCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhh------hcccccc
Confidence 01112222222446667777789999999999999999999986543 2232 4556788
Q ss_pred EEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEE--EcC
Q 000316 1507 ICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIW--DLR 1583 (1678)
Q Consensus 1507 va~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IW--Dl~ 1583 (1678)
++++ ++..++++||.|.+-++||.++-++++++. -..+|++.+ +|....++.|+.....-|= +.+
T Consensus 196 ~q~s-----------~d~T~FiT~s~Dttakl~D~~tl~v~Kty~-te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r 263 (327)
T KOG0643|consen 196 LQFS-----------RDRTYFITGSKDTTAKLVDVRTLEVLKTYT-TERPVNTAAISPLLDHVILGGGQEAMDVTTTSTR 263 (327)
T ss_pred cccc-----------CCcceEEecccCccceeeeccceeeEEEee-ecccccceecccccceEEecCCceeeeeeeeccc
Confidence 8775 455799999999999999999999999998 478999999 8877767666654333222 222
Q ss_pred CCC----------CCCCeEeecCCCCEE--EEEecCCEEEEEeCCC-eEEEecC
Q 000316 1584 RNW----------PSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1584 ~~~----------~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~ 1624 (1678)
.++ .+.+...+||-++|+ +|+|+|+..+||+.|| |++.-..
T Consensus 264 ~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd 317 (327)
T KOG0643|consen 264 AGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFD 317 (327)
T ss_pred ccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEEec
Confidence 232 133456789999999 5999999999999999 9988764
No 340
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.92 E-value=4.3e-25 Score=242.22 Aligned_cols=277 Identities=18% Similarity=0.261 Sum_probs=224.2
Q ss_pred cccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEE--------ecCCccEEEEeecCCCCcEEeC--CCc
Q 000316 1325 AHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGY--------YGHEEVVNDICVLSSSGRIASC--DGT 1394 (1678)
Q Consensus 1325 gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l--------~gH~~~V~sV~fs~~~~~laS~--Dgt 1394 (1678)
|....+.|..|||||++|+|||. ||.|.+||..+|+..+.+ --|.++|.|++|+.+..++||+ ||.
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSv----DGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGk 286 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSV----DGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGK 286 (508)
T ss_pred ccccchhheeeCCCCceEeeccc----cceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCc
Confidence 45677899999999999999998 999999999999765533 3488999999999999999665 999
Q ss_pred EEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECC
Q 000316 1395 LHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGN 1474 (1678)
Q Consensus 1395 VrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~D 1474 (1678)
|++|.+++|.|++.|... |+ ..++|+.|+.|+..+++++.|
T Consensus 287 IKvWri~tG~ClRrFdrA-----------------------------Ht----------kGvt~l~FSrD~SqiLS~sfD 327 (508)
T KOG0275|consen 287 IKVWRIETGQCLRRFDRA-----------------------------HT----------KGVTCLSFSRDNSQILSASFD 327 (508)
T ss_pred EEEEEEecchHHHHhhhh-----------------------------hc----------cCeeEEEEccCcchhhccccc
Confidence 999999999999888732 11 236788888889999999999
Q ss_pred CcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEe--c
Q 000316 1475 GSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR--A 1552 (1678)
Q Consensus 1475 gtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~--g 1552 (1678)
.++|+--+.+|++++.++||. +.|+...|. ++|+.++++|+||+|++|+.++++++.+++ +
T Consensus 328 ~tvRiHGlKSGK~LKEfrGHs------Syvn~a~ft-----------~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~ 390 (508)
T KOG0275|consen 328 QTVRIHGLKSGKCLKEFRGHS------SYVNEATFT-----------DDGHHIISASSDGTVKVWHGKTTECLSTFKPLG 390 (508)
T ss_pred ceEEEeccccchhHHHhcCcc------ccccceEEc-----------CCCCeEEEecCCccEEEecCcchhhhhhccCCC
Confidence 999999999999999999764 456665553 566899999999999999999999999998 4
Q ss_pred cCCCeEEEE-cC-CCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecC----CCCEE-EEEecCCEEEEEeCCC-eEEEecC
Q 000316 1553 HDGYVTKLA-AP-EDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGH----TNGIS-GFSVWGQDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1553 H~~~V~sva-sp-dg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH----~~~V~-afSpdg~~LaSgs~D~-I~vwdl~ 1624 (1678)
.+-+|++|. .| +...++.|...++|.|-++.. +.+..+..- .+-|. ++||.|.++...+.|+ ++.|++.
T Consensus 391 ~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qG---QvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~ 467 (508)
T KOG0275|consen 391 TDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQG---QVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVL 467 (508)
T ss_pred CcccceeEEEcCCCCceEEEEcCCCeEEEEeccc---eEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEee
Confidence 567889988 44 456889999999999998864 233333221 12345 4999999999999999 8999875
Q ss_pred CCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1625 KSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1625 ~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
. | ++..... -|...|-.++-+|...++|+=++||.+++|-
T Consensus 468 s-----G-------~LE~tl~--VhEkdvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 468 S-----G-------KLERTLP--VHEKDVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred c-----C-------ceeeeee--cccccccccccCcccchhhhhcccchhhhcC
Confidence 1 1 2211111 2666788899999999999999999999993
No 341
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.92 E-value=1.7e-25 Score=280.48 Aligned_cols=197 Identities=14% Similarity=0.078 Sum_probs=154.3
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-CCccccee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPVL 241 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-HpNIV~l~ 241 (1678)
++++.+.|.+|+|+.||+|++. ..+..+|+|++... .+... +.++ +||++|+.|+ |+|||.++
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~------~~~~~~AlKrm~~~--de~~L-~~v~-------~EI~~MK~L~gh~nIV~yi 101 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDV------KGGKKYALKRMYVN--DEEAL-NAVK-------REIDIMKLLSGHKNIVSYI 101 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEec------CCCceeeeeeeecC--CHHHH-HHHH-------HHHHHHHHhcCCCceeeEe
Confidence 6789999999999999999965 33488999998753 33333 3333 9999999997 99999999
Q ss_pred eEEE-e---C---CeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCCeEecC
Q 000316 242 GLLK-T---S---GLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLG--IAHRSVCPSNVLLTD 311 (1678)
Q Consensus 242 ~~~~-~---~---~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~g--IiHRDLKP~NILl~~ 311 (1678)
|... . . -.++|.||||. |.|-+++..+....|+|.++..|++|+++||.+||... |||||||-|||||+.
T Consensus 102 dss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~ 181 (738)
T KOG1989|consen 102 DSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSA 181 (738)
T ss_pred ccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcC
Confidence 9322 1 1 25789999999 59999998766666999999999999999999999987 999999999999999
Q ss_pred CCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccc---ccccccccccccccCccc
Q 000316 312 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS---QSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 312 ~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~---~~~~y~~~~d~W~~G~is 379 (1678)
+| +.||||||.|............ . ..-.-.-....|+.|+|||++ .+.+.+.+.|+|..|||.
T Consensus 182 ~g--~~KLCDFGSatt~~~~~~~~~e-~-~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclL 248 (738)
T KOG1989|consen 182 DG--NYKLCDFGSATTKILSPTSAQE-V-NYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLL 248 (738)
T ss_pred CC--CEEeCcccccccccCCCccHHH-H-HHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHH
Confidence 99 9999999999753321110000 0 000000012368999999965 588999999999999986
No 342
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.92 E-value=1.6e-24 Score=251.37 Aligned_cols=189 Identities=13% Similarity=0.127 Sum_probs=158.7
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.+.||+|+||.||++.+. .++..+|+|.++.... ......+. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~------~~~~~~~iK~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~~i~~~~~ 65 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHV------NSDQKYAMKEIRLPKS-SSAVEDSR--------KEAVLLAKMKHPNIVAFKE 65 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEc------CCCceEEEEEEEcCcc-hHHHHHHH--------HHHHHHHhCCCCCcceEEE
Confidence 5899999999999999999965 4678899999865322 22233333 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
.+.+++.+|+||||+++ +|.+++.......+++..++.++.||+.||.|||++||+|+||||+||++++++ .++|+|
T Consensus 66 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~--~~~l~d 143 (255)
T cd08219 66 SFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNG--KVKLGD 143 (255)
T ss_pred EEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCC--cEEEcc
Confidence 99999999999999985 999998755556689999999999999999999999999999999999999998 899999
Q ss_pred cCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
||+++....... ......+++.|+|||++.+..++.++|+|+.|.+.
T Consensus 144 fg~~~~~~~~~~-----------~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~ 190 (255)
T cd08219 144 FGSARLLTSPGA-----------YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCIL 190 (255)
T ss_pred cCcceeeccccc-----------ccccccCCccccCHHHHccCCcCchhhhhhhchhh
Confidence 999875432110 11123478889999999998999999999999553
No 343
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.92 E-value=4.7e-25 Score=280.80 Aligned_cols=195 Identities=15% Similarity=0.102 Sum_probs=148.6
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEE--------------EeccC-CcChHHHHHHHHhcCCCchh
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLN--------------LLIEG-KASGQESKNFLRLIGVPSFD 224 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK--------------~i~~~-~~~~~~~~~~l~~~~~~~~~ 224 (1678)
..++|+++++||+|+||+||+|..+.. .+..++.| .+.+. .........+. +
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~--------~ 212 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRAS-----TEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLE--------N 212 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEecc-----chhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHH--------H
Confidence 356899999999999999999875421 11112222 11110 01111112222 8
Q ss_pred HHHhhccCCCCcccceeeEEEeCCeEEEeccCCCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecC
Q 000316 225 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSP---NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRS 301 (1678)
Q Consensus 225 Ei~iL~~l~HpNIV~l~~~~~~~~~~~lVmEy~~g~L~~~l~~~~---~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRD 301 (1678)
|+.+|+.++|||||++++++...+..|+|||++.++|.+++.... ......+.++.++.||+.||.|||++||||||
T Consensus 213 Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrD 292 (501)
T PHA03210 213 EILALGRLNHENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRD 292 (501)
T ss_pred HHHHHHhCCCCCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 999999999999999999999999999999999999988876321 22345677889999999999999999999999
Q ss_pred CCCCCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 302 VCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 302 LKP~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||+|||++.++ .+||+|||+++........ ......||..|+|||++.+..|+.++|+|+.|++.
T Consensus 293 LKP~NILl~~~~--~vkL~DFGla~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 358 (501)
T PHA03210 293 IKLENIFLNCDG--KIVLGDFGTAMPFEKEREA----------FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLIL 358 (501)
T ss_pred CCHHHEEECCCC--CEEEEeCCCceecCccccc----------ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHH
Confidence 999999999999 8999999999864321110 01123478999999999999999999999999664
No 344
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.92 E-value=7.6e-25 Score=245.22 Aligned_cols=279 Identities=21% Similarity=0.330 Sum_probs=222.0
Q ss_pred eeEEeccccccEEEEEEecCC-CEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE-EeCCCcEE
Q 000316 1319 ILSSIRAHHGALRSVAVGQDE-CTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLH 1396 (1678)
Q Consensus 1319 ~l~tl~gH~~~V~svafspdg-~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l-aS~DgtVr 1396 (1678)
.+..|.||.+.|.|++=+|+. ..++|||. ||.|++||+...+|..+++.|.+.|..|++.. +..+ ++.|++|+
T Consensus 58 Fv~~L~gHrdGV~~lakhp~~ls~~aSGs~----DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~-~~~~tvgdDKtvK 132 (433)
T KOG0268|consen 58 FVGSLDGHRDGVSCLAKHPNKLSTVASGSC----DGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ-TSFFTVGDDKTVK 132 (433)
T ss_pred chhhccccccccchhhcCcchhhhhhcccc----CceEEEEehhhhhhhheeecccCceeeEEecc-cceEEecCCccee
Confidence 567789999999999999987 78999996 99999999999999999999999999999865 4444 66799999
Q ss_pred EEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCc
Q 000316 1397 VWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGS 1476 (1678)
Q Consensus 1397 IWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~Dgt 1476 (1678)
.|... +..++++-+.+ .+..++.+.-+..++|++. .
T Consensus 133 ~wk~~-~~p~~tilg~s-----------------------------------------~~~gIdh~~~~~~FaTcGe--~ 168 (433)
T KOG0268|consen 133 QWKID-GPPLHTILGKS-----------------------------------------VYLGIDHHRKNSVFATCGE--Q 168 (433)
T ss_pred eeecc-CCcceeeeccc-----------------------------------------cccccccccccccccccCc--e
Confidence 99876 34555544321 1222333334567787765 5
Q ss_pred EEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCC
Q 000316 1477 LRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGY 1556 (1678)
Q Consensus 1477 VrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~ 1556 (1678)
|.|||.....++..+... ...+.++.|.+... ++|++|.+|+.|.+||+|++++++.+. -+-.
T Consensus 169 i~IWD~~R~~Pv~smswG------~Dti~svkfNpvET----------sILas~~sDrsIvLyD~R~~~Pl~KVi-~~mR 231 (433)
T KOG0268|consen 169 IDIWDEQRDNPVSSMSWG------ADSISSVKFNPVET----------SILASCASDRSIVLYDLRQASPLKKVI-LTMR 231 (433)
T ss_pred eeecccccCCccceeecC------CCceeEEecCCCcc----------hheeeeccCCceEEEecccCCccceee-eecc
Confidence 999999988888887753 23477787766444 689999999999999999999887765 2344
Q ss_pred eEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEE--EEecCCEEEEEeCCC-eEEEecCCCCCCCCc
Q 000316 1557 VTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQ 1632 (1678)
Q Consensus 1557 V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~ 1632 (1678)
-+.|+ .|++-.+++|+.|..++.+|++.-. .++...++|.+.|.+ |||.|+.++|||-|+ |+||.+...-+
T Consensus 232 TN~IswnPeafnF~~a~ED~nlY~~DmR~l~-~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~S---- 306 (433)
T KOG0268|consen 232 TNTICWNPEAFNFVAANEDHNLYTYDMRNLS-RPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHS---- 306 (433)
T ss_pred ccceecCccccceeeccccccceehhhhhhc-ccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcc----
Confidence 56777 8888899999999999999998863 667788999999994 999999999999999 99999752211
Q ss_pred ceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1633 HRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1633 ~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
..+|-. +..+.|.+|.|+-|.+++++||+||+||+|
T Consensus 307 -----RdiYht----kRMq~V~~Vk~S~Dskyi~SGSdd~nvRlW 342 (433)
T KOG0268|consen 307 -----RDIYHT----KRMQHVFCVKYSMDSKYIISGSDDGNVRLW 342 (433)
T ss_pred -----hhhhhH----hhhheeeEEEEeccccEEEecCCCcceeee
Confidence 122211 234679999999999999999999999999
No 345
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1.1e-26 Score=269.78 Aligned_cols=202 Identities=19% Similarity=0.235 Sum_probs=172.4
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+++++..||-|+||.|-+++.+ .....+|+|++++....+....+.+. .|.+||..++.|.||+|
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~------~~~~~fAlKilkK~hIVdtkQqeHv~-------sEr~Im~~~~s~fIvrL 485 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVN------SQKATFALKILKKKHIVDTKQQEHVF-------SERNIMMECRSDFIVRL 485 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEec------ccchHHHHHHHhHhhccchhHHHHHH-------hHHHHHHhcCchHHHHH
Confidence 567899999999999999999854 22336899999987777766666653 99999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
|-.|.++.++|++||-|- |+|-.+++ .++.|.+..+++|+..+++|++|||++|||+|||||||+|++.+| .+||
T Consensus 486 YrTfrd~kyvYmLmEaClGGElWTiLr--dRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~G--y~KL 561 (732)
T KOG0614|consen 486 YRTFRDSKYVYMLMEACLGGELWTILR--DRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRG--YLKL 561 (732)
T ss_pred HHHhccchhhhhhHHhhcCchhhhhhh--hcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCC--ceEE
Confidence 999999999999999887 59999999 678899999999999999999999999999999999999999999 7999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccC
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aG 392 (1678)
.|||+|+......++ -+-| |||.|.|||++.++..+.++|.|+.|.+ .||.|+.-.+|+|
T Consensus 562 VDFGFAKki~~g~KT------wTFc------GTpEYVAPEIILnKGHD~avDyWaLGIl-i~ELL~G~pPFs~ 621 (732)
T KOG0614|consen 562 VDFGFAKKIGSGRKT------WTFC------GTPEYVAPEIILNKGHDRAVDYWALGIL-IYELLTGSPPFSG 621 (732)
T ss_pred eehhhHHHhccCCce------eeec------CCcccccchhhhccCcchhhHHHHHHHH-HHHHHcCCCCCCC
Confidence 999999976633222 1222 7999999999999999999999999933 3565555555554
No 346
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.92 E-value=1.1e-24 Score=269.64 Aligned_cols=198 Identities=17% Similarity=0.124 Sum_probs=156.7
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-CCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-HpNIV~ 239 (1678)
.++|++++.||+|+||.||+|.+.. .+....+..||||++.... .......++ +|+++|+.+. |||||+
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~-~~~~~~~~~vavK~l~~~~-~~~~~~~~~--------~Ei~~l~~l~~HpnIv~ 105 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYG-LSRSQPVMKVAVKMLKPTA-RSSEKQALM--------SELKIMTHLGPHLNIVN 105 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcc-cCCCCCceEEEEEecCCCC-ChHHHHHHH--------HHHHHHHhcCCCCCeee
Confidence 5589999999999999999998632 1122345679999986532 222233444 8999999996 999999
Q ss_pred eeeEEEeCCeEEEeccCCC-CCHHHHHhhCC-------------------------------------------------
Q 000316 240 VLGLLKTSGLITSVIPKTP-YTLENILQFSP------------------------------------------------- 269 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~------------------------------------------------- 269 (1678)
+++++.+.+.+|||||||+ |+|.++|....
T Consensus 106 l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (400)
T cd05105 106 LLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADT 185 (400)
T ss_pred EEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccc
Confidence 9999999999999999999 59999886421
Q ss_pred ---------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCC
Q 000316 270 ---------------------------------------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 304 (1678)
Q Consensus 270 ---------------------------------------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP 304 (1678)
...+++..+..++.||+.||.|||++||+||||||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp 265 (400)
T cd05105 186 TQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAA 265 (400)
T ss_pred cccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCh
Confidence 12467788889999999999999999999999999
Q ss_pred CCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 305 SNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 305 ~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||++.++ .+||+|||+++......... ......++..|+|||++.+..++.++|+|+.|++.
T Consensus 266 ~Nill~~~~--~~kL~DfGla~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil 329 (400)
T cd05105 266 RNVLLAQGK--IVKICDFGLARDIMHDSNYV---------SKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILL 329 (400)
T ss_pred HhEEEeCCC--EEEEEeCCcceecccccccc---------ccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHH
Confidence 999999998 89999999998543211100 01112356789999999999999999999999654
No 347
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.92 E-value=4.4e-24 Score=253.66 Aligned_cols=324 Identities=18% Similarity=0.198 Sum_probs=237.4
Q ss_pred EEEEeCCCCEEEEeCC---C----ceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCC--eEEEEEec
Q 000316 1301 LGRVGGLKDESPWKIK---A----SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRI--NCVSGYYG 1371 (1678)
Q Consensus 1301 LasgS~D~~v~lWd~~---~----~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg--~~l~~l~g 1371 (1678)
|.|||.||.+++|++. + ..+.+++.|++.|+.++...+|+.|+|+|. |-||++|+...+ -|+.++..
T Consensus 40 LfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~Ss----DtTVK~W~~~~~~~~c~stir~ 115 (735)
T KOG0308|consen 40 LFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASS----DTTVKVWNAHKDNTFCMSTIRT 115 (735)
T ss_pred EEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecC----CceEEEeecccCcchhHhhhhc
Confidence 9999999999999987 2 157889999999999999999999999998 999999999887 68889999
Q ss_pred CCccEEEEee-cCCCCcEEeC--CCcEEEEECCCCc--eeEEecccCccccccCCCCCCccccccccccccccCCCCCCe
Q 000316 1372 HEEVVNDICV-LSSSGRIASC--DGTLHVWNSQTGK--LLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGI 1446 (1678)
Q Consensus 1372 H~~~V~sV~f-s~~~~~laS~--DgtVrIWD~~tg~--~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v 1446 (1678)
|++.|.|++. .++...+||+ |+.|.+||+++|. .+.++..-... ..+ .+...
T Consensus 116 H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~----sl~-----------------sG~k~-- 172 (735)
T KOG0308|consen 116 HKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVN----SLG-----------------SGPKD-- 172 (735)
T ss_pred ccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccc----cCC-----------------CCCcc--
Confidence 9999999998 5566666776 9999999999883 34333321100 000 01122
Q ss_pred EEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCE
Q 000316 1447 LSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSW 1526 (1678)
Q Consensus 1447 ~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~ 1526 (1678)
.+.+++-++.|..+++|+..+.+++||.++++.+..++||+. .|+++-.. .+|..
T Consensus 173 --------siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTd------NVr~ll~~-----------dDGt~ 227 (735)
T KOG0308|consen 173 --------SIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTD------NVRVLLVN-----------DDGTR 227 (735)
T ss_pred --------ceeeeecCCcceEEEecCcccceEEeccccccceeeeecccc------ceEEEEEc-----------CCCCe
Confidence 355566666788999999999999999999999999997654 47777654 56789
Q ss_pred EEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEE--E
Q 000316 1527 IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--F 1603 (1678)
Q Consensus 1527 LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--f 1603 (1678)
+++||+||+|++||++..+++.++..|+..|+++. +++=..+.+|+.||.|..=|+++.. .. ..+--...+|.. .
T Consensus 228 ~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~-~~-tlick~daPv~~l~~ 305 (735)
T KOG0308|consen 228 LLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPA-KS-TLICKEDAPVLKLHL 305 (735)
T ss_pred EeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCch-hh-eEeecCCCchhhhhh
Confidence 99999999999999999999999999999999999 8888899999999999999999852 12 222222334442 2
Q ss_pred EecCCEEEEEeCCC-eEEEecCCCC------CCCCcceeccceeeee---ecCC-CccCcEEEEEEecCCCEEEEEeCCC
Q 000316 1604 SVWGQDVISISNNK-IGLSSLSKSA------DEDGQHRLVPQKLYMV---DNGA-KNLSVLSSISILPFSRLFLVGTEDG 1672 (1678)
Q Consensus 1604 Spdg~~LaSgs~D~-I~vwdl~~~~------~~~g~~~~~~~kl~~~---~~g~-~h~~~I~svafsPd~~lLatgs~DG 1672 (1678)
+.+.+-+=+++.|+ |+-|...... +............... .... .....|...+...|.|.++|-..+|
T Consensus 306 ~~~~~~~WvtTtds~I~rW~~~~~~~l~~s~~~~~~~T~~~~~~~~~~~tp~~vi~Gg~ai~k~~mL~dkRhVlTkDa~g 385 (735)
T KOG0308|consen 306 HEHDNSVWVTTTDSSIKRWKLEPDIALSVSGDLDFFSTDSNNHSCDLTNTPDSVIPGGAAIKKHAMLNDKRHVLTKDAKG 385 (735)
T ss_pred ccccCCceeeeccccceecCCccccccccCCCCCcccccCCCccccccCCCceeccCchhhhhhhhhcCcceEeeecCCC
Confidence 22222223455566 8888754211 1111000000000000 0000 1123577788889999999999999
Q ss_pred cEEEcC
Q 000316 1673 YLRLCC 1678 (1678)
Q Consensus 1673 ~IrIwd 1678 (1678)
.+.+||
T Consensus 386 nv~lwD 391 (735)
T KOG0308|consen 386 NVALWD 391 (735)
T ss_pred CEEEEE
Confidence 999997
No 348
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.92 E-value=2e-24 Score=259.38 Aligned_cols=195 Identities=18% Similarity=0.146 Sum_probs=153.5
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++.+.||+|+||.||+|.+.. ........||+|.++.. .......++. +|+.+++.++||||+++
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~--~~~~~~~~vaiK~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~niv~~ 74 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIP--EGEKVKIPVAIKELREA-TSPKANKEIL--------DEAYVMASVDNPHVCRL 74 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEec--CCCccceeEEEEecccc-CCHHHHHHHH--------HHHHHHHhCCCCCCCeE
Confidence 4579999999999999999998542 11122345899998643 2223334444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++... ..++|+||++ |+|.+++.. ....++...+..++.||+.||+|||++||+||||||+|||++.++ .+||
T Consensus 75 ~g~~~~~-~~~~v~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~--~~kl 150 (316)
T cd05108 75 LGICLTS-TVQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQ--HVKI 150 (316)
T ss_pred EEEEcCC-CceeeeecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCC--cEEE
Confidence 9998764 5778999998 599999984 234578889999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++.......... .....++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 151 ~DfG~a~~~~~~~~~~~---------~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l 201 (316)
T cd05108 151 TDFGLAKLLGADEKEYH---------AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 201 (316)
T ss_pred ccccccccccCCCccee---------ccCCccceeecChHHhccCCCCchhhhHHHHHHH
Confidence 99999986542111100 0111235679999999999999999999999553
No 349
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.91 E-value=9.9e-24 Score=259.87 Aligned_cols=240 Identities=23% Similarity=0.403 Sum_probs=191.4
Q ss_pred eeEEec-cccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCC--------------------------------C--
Q 000316 1319 ILSSIR-AHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR--------------------------------I-- 1363 (1678)
Q Consensus 1319 ~l~tl~-gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~t--------------------------------g-- 1363 (1678)
..+.+. +|.++|+++.||+||++|||||. |+.||||.+.. .
T Consensus 258 ~~Qe~~~ah~gaIw~mKFS~DGKyLAsaGe----D~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~ 333 (712)
T KOG0283|consen 258 VVQEISNAHKGAIWAMKFSHDGKYLASAGE----DGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKIS 333 (712)
T ss_pred EeeccccccCCcEEEEEeCCCCceeeecCC----CceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccc
Confidence 345566 89999999999999999999998 99999998643 0
Q ss_pred --------------------------eEEEEEecCCccEEEEeecCCCCcE-EeCCCcEEEEECCCCceeEEecccCccc
Q 000316 1364 --------------------------NCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLHVWNSQTGKLLSVFAEQSMDS 1416 (1678)
Q Consensus 1364 --------------------------~~l~~l~gH~~~V~sV~fs~~~~~l-aS~DgtVrIWD~~tg~~~~~l~~~~~~~ 1416 (1678)
+++..|+||.+.|.+|.|+.++-.| +|-|+|||+|++...+|+++|..
T Consensus 334 ~~~s~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F~H----- 408 (712)
T KOG0283|consen 334 SRTSSSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVFSH----- 408 (712)
T ss_pred ccccccccccCCccccCCCccccccccchhhhhccchhheecccccCCeeEeccccccEEeecCCCcceeeEEec-----
Confidence 2355678999999999997766666 55699999999999999998873
Q ss_pred cccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeec-CCCEEEEEECCCcEEEEECCCCeeeEEeeCCC
Q 000316 1417 LHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIE-CVERLVVGIGNGSLRFIDINQGQKLHLWRGEP 1495 (1678)
Q Consensus 1417 ~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp-~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~ 1495 (1678)
++.|||++|+| |.+++++|+-||.||||++...+.+.-..
T Consensus 409 ------------------------------------ndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~D--- 449 (712)
T KOG0283|consen 409 ------------------------------------NDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWND--- 449 (712)
T ss_pred ------------------------------------CCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehh---
Confidence 34566666666 67899999999999999998766553222
Q ss_pred CcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEecc--------CCCeEEEE-cC-CC
Q 000316 1496 TELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAH--------DGYVTKLA-AP-ED 1565 (1678)
Q Consensus 1496 ~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH--------~~~V~sva-sp-dg 1565 (1678)
....|+++|++ |+|+..+.|+-+|.+++|+++..+....+.-+ ...|+++. .| +.
T Consensus 450 ----l~~lITAvcy~-----------PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~ 514 (712)
T KOG0283|consen 450 ----LRDLITAVCYS-----------PDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDP 514 (712)
T ss_pred ----hhhhheeEEec-----------cCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCC
Confidence 23569999986 56789999999999999999988777665421 12799998 43 33
Q ss_pred CEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCC---CEEE-EEecCCEEEEEeCCC-eEEEec
Q 000316 1566 HLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN---GISG-FSVWGQDVISISNNK-IGLSSL 1623 (1678)
Q Consensus 1566 ~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~---~V~a-fSpdg~~LaSgs~D~-I~vwdl 1623 (1678)
..++..|.|..|+|+|.++. ..+..|+|+.. .+.| |+.||++|+++++|. |++|++
T Consensus 515 ~~vLVTSnDSrIRI~d~~~~--~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~ 575 (712)
T KOG0283|consen 515 DEVLVTSNDSRIRIYDGRDK--DLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKN 575 (712)
T ss_pred CeEEEecCCCceEEEeccch--hhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeC
Confidence 35666678999999999876 45567777654 4554 999999999999999 999997
No 350
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.91 E-value=1.1e-24 Score=256.78 Aligned_cols=198 Identities=15% Similarity=0.111 Sum_probs=158.3
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||+|+||.||+|.... .+.......+|+|.+.... .......+. +|+.+++.++||||+++
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~~~~v~~K~~~~~~-~~~~~~~~~--------~ei~~l~~l~h~~i~~~ 73 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTG-PNERLSATSVAIKTLKENA-EPKVQQEFR--------QEAELMSDLQHPNIVCL 73 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEec-CCCCcceeeEEEEecccCC-CHHHHHHHH--------HHHHHHHhcCCcccceE
Confidence 4579999999999999999998642 1122455789999986532 222233344 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCC
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPN--------------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPS 305 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~--------------~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~ 305 (1678)
++++......+++|||++ ++|.+++..... ..+++..+..++.|++.||.|||++||+||||||+
T Consensus 74 ~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~ 153 (283)
T cd05048 74 LGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAAR 153 (283)
T ss_pred EEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccc
Confidence 999999999999999998 599999974211 45788899999999999999999999999999999
Q ss_pred CeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 306 NVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 306 NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
||++++++ .+||+|||+++......... ......+++.|+|||.+.+..++.++|+|+.|++.
T Consensus 154 Nil~~~~~--~~~L~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il 216 (283)
T cd05048 154 NCLVGEGL--TVKISDFGLSRDIYSADYYR---------VQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVL 216 (283)
T ss_pred eEEEcCCC--cEEECCCcceeecccccccc---------ccCCCcccccccCHHHhccCcCchhhhHHHHHHHH
Confidence 99999998 89999999998543211100 01112357789999999888999999999999664
No 351
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.91 E-value=2.1e-25 Score=282.81 Aligned_cols=206 Identities=20% Similarity=0.234 Sum_probs=157.0
Q ss_pred cccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcc
Q 000316 158 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 237 (1678)
Q Consensus 158 ~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNI 237 (1678)
.+-..+|+.++.||+|+||.||++++++ +|+.||||+|.... ......+.+ +|+.+|.+|+||||
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKl------DGr~YAIKKIpl~~-s~~~~skI~--------rEVk~LArLnHpNV 539 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKL------DGREYAIKKIPLKA-SDKLYSKIL--------REVKLLARLNHPNV 539 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecc------cchhhhhhhccCch-HHHHHHHHH--------HHHHHHhhcCCcce
Confidence 3446689999999999999999999874 89999999997653 333333333 99999999999999
Q ss_pred cceeeEEEeC----------------------------------------------------------------------
Q 000316 238 APVLGLLKTS---------------------------------------------------------------------- 247 (1678)
Q Consensus 238 V~l~~~~~~~---------------------------------------------------------------------- 247 (1678)
|++|..+...
T Consensus 540 VRYysAWVEs~~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e 619 (1351)
T KOG1035|consen 540 VRYYSAWVESTAELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEE 619 (1351)
T ss_pred eeeehhhhccCCccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcc
Confidence 9977543100
Q ss_pred -------------------------------------------------CeEEEeccCCCC-CHHHHHhhCCCCCC-CHH
Q 000316 248 -------------------------------------------------GLITSVIPKTPY-TLENILQFSPNALK-SEW 276 (1678)
Q Consensus 248 -------------------------------------------------~~~~lVmEy~~g-~L~~~l~~~~~~~l-~~~ 276 (1678)
..+||-||||+- .|.++++. +... ...
T Consensus 620 ~~d~dedg~~~S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~--N~~~~~~d 697 (1351)
T KOG1035|consen 620 NDDSDEDGRNLSNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRR--NHFNSQRD 697 (1351)
T ss_pred cccccccccccccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHh--cccchhhH
Confidence 136899999996 66666662 3332 467
Q ss_pred HHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCcccCCC---CC---cc--cccCCCCcceeecc
Q 000316 277 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSI---AD---WC--TIPTSPMIGCCIEG 348 (1678)
Q Consensus 277 ~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~~~~---~~---~~--~~~~~~~~~~~~~~ 348 (1678)
.+..+++||+.||.|+|++|||||||||.||++++++ .|||.|||+|+.... .. .. ........+ ..+.
T Consensus 698 ~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~--~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~-~~Ts 774 (1351)
T KOG1035|consen 698 EAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRN--SVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDG-DLTS 774 (1351)
T ss_pred HHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCC--CeeecccccchhhhhhhhhHhhccCccccccCCCCc-cccc
Confidence 7889999999999999999999999999999999998 899999999997221 00 00 000111111 2345
Q ss_pred cccCccccccccccccc---ccccccccccCccchhhhH
Q 000316 349 CSSQGLYADLKLSQSMD---WHSQFNRWWRGELSNFEYL 384 (1678)
Q Consensus 349 ~~gt~~Y~APE~~~~~~---y~~~~d~W~~G~isnfeyL 384 (1678)
..||..|+|||++.+.. |+.++|+++.|.|. ||++
T Consensus 775 ~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVl-FEM~ 812 (1351)
T KOG1035|consen 775 QVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVL-FEML 812 (1351)
T ss_pred ccceeeeecHHHhcccccccccchhhhHHHHHHH-HHHh
Confidence 57899999999998665 99999999999776 7765
No 352
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.91 E-value=2.4e-24 Score=254.17 Aligned_cols=197 Identities=16% Similarity=0.183 Sum_probs=157.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|..... ....+..+|+|.+... .......++. +|+.+++.++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~--~~~~~~~~~ik~~~~~-~~~~~~~~~~--------~E~~~l~~l~h~niv~~ 72 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYLP--GMDHAQLVAIKTLKDI-NNPQQWGEFQ--------QEASLMAELHHPNIVCL 72 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEecC--CCCCcceEEEEeccCC-CCHHHHHHHH--------HHHHHHhhCCCCCeeeE
Confidence 46799999999999999999985321 1245788999998753 2222333343 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCC---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCC
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSP---------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 304 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~---------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP 304 (1678)
++++......|+||||++ ++|.+++.... ...+++..+..++.|++.||.|||++||+||||||
T Consensus 73 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp 152 (283)
T cd05090 73 LGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAA 152 (283)
T ss_pred EEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhcccc
Confidence 999999999999999999 59999985321 23477888999999999999999999999999999
Q ss_pred CCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 305 SNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 305 ~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||++.++ .+||+|||+++......... ......++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 153 ~nili~~~~--~~kl~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 216 (283)
T cd05090 153 RNILIGEQL--HVKISDLGLSREIYSADYYR---------VQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVL 216 (283)
T ss_pred ceEEEcCCC--cEEeccccccccccCCccee---------cccCCCccceecChHHhccCCCCchhhhHHHHHHH
Confidence 999999998 89999999998643211100 01112246679999999888899999999999654
No 353
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.91 E-value=1.4e-24 Score=263.30 Aligned_cols=198 Identities=17% Similarity=0.154 Sum_probs=156.1
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
.++|++.+.||+|+||.||+|...- .+...+++.||+|+++... .......+. +|+.+++.+ +||||++
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~-~~~~~~~~~va~K~~~~~~-~~~~~~~~~--------~E~~~~~~l~~h~niv~ 75 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFG-IEKSASCRTVAVKMLKEGA-TASEYKALM--------TELKILIHIGHHLNVVN 75 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccc-cccccccceeeeeeccCCC-CHHHHHHHH--------HHHHHHHhhccCcchhh
Confidence 3589999999999999999997431 2233467899999986432 222233333 899999999 8999999
Q ss_pred eeeEEEeC-CeEEEeccCCCC-CHHHHHhhCCC-----------------------------------------------
Q 000316 240 VLGLLKTS-GLITSVIPKTPY-TLENILQFSPN----------------------------------------------- 270 (1678)
Q Consensus 240 l~~~~~~~-~~~~lVmEy~~g-~L~~~l~~~~~----------------------------------------------- 270 (1678)
+++++... ..++++|||+++ +|.+++.....
T Consensus 76 ~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (337)
T cd05054 76 LLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSD 155 (337)
T ss_pred eeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhh
Confidence 99988654 578999999995 99999863211
Q ss_pred ------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCcccCCCCCcccccC
Q 000316 271 ------------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPT 338 (1678)
Q Consensus 271 ------------~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~ 338 (1678)
..++...+..++.||+.||+|||++||+||||||+|||++.++ .+||+|||+++.........
T Consensus 156 ~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~--~vkL~DfG~a~~~~~~~~~~--- 230 (337)
T cd05054 156 VEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENN--VVKICDFGLARDIYKDPDYV--- 230 (337)
T ss_pred cccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCC--cEEEeccccchhcccCcchh---
Confidence 2578888999999999999999999999999999999999988 89999999998643211100
Q ss_pred CCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 339 SPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 339 ~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
. .....++..|+|||++.+..++.++|+|+.|++.
T Consensus 231 --~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l 265 (337)
T cd05054 231 --R----KGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLL 265 (337)
T ss_pred --h----ccCCCCCccccCcHHhcCCCCCccccHHHHHHHH
Confidence 0 1123456789999999999999999999999664
No 354
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.91 E-value=3e-24 Score=252.46 Aligned_cols=198 Identities=15% Similarity=0.090 Sum_probs=156.4
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.++-.. ....+..+|+|.+.... ......++. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~-~~~~~~~~aik~~~~~~-~~~~~~~~~--------~e~~~l~~l~~~~iv~~ 74 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVV-KDEPETRVAIKTVNEAA-SMRERIEFL--------NEASVMKEFNCHHVVRL 74 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCC-CCCceeEEEEEeccccC-CHHHHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 467999999999999999999864211 12346789999986432 222333444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecC
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSP--------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~--------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~ 311 (1678)
++++..+...++||||++ ++|.++++... ...++...+..++.|++.||.|||++|++||||||+|||+++
T Consensus 75 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~ 154 (277)
T cd05062 75 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 154 (277)
T ss_pred EEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcC
Confidence 999999999999999999 49999997422 123567788899999999999999999999999999999999
Q ss_pred CCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 312 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 312 ~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
++ .+||+|||+++........... ....+++.|||||++.+..++.++|+|+.|.+.
T Consensus 155 ~~--~~~l~dfg~~~~~~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 211 (277)
T cd05062 155 DF--TVKIGDFGMTRDIYETDYYRKG---------GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 211 (277)
T ss_pred CC--CEEECCCCCccccCCcceeecC---------CCCccCHhhcChhHhhcCCcCchhHHHHHHHHH
Confidence 98 8999999999854321110000 011246789999999988999999999999664
No 355
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.91 E-value=1.6e-23 Score=258.07 Aligned_cols=242 Identities=15% Similarity=0.259 Sum_probs=195.5
Q ss_pred CCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCCC-----------------------------------------
Q 000316 1281 KCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKA----------------------------------------- 1317 (1678)
Q Consensus 1281 gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~~----------------------------------------- 1317 (1678)
.|++.||+ ||+||++ ||+|+.|+.|+||.+-.
T Consensus 265 ah~gaIw~mKFS~DGKy-----LAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~ 339 (712)
T KOG0283|consen 265 AHKGAIWAMKFSHDGKY-----LASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS 339 (712)
T ss_pred ccCCcEEEEEeCCCCce-----eeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence 79999998 9999998 99999999999998533
Q ss_pred --------------------ceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEE
Q 000316 1318 --------------------SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVN 1377 (1678)
Q Consensus 1318 --------------------~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~ 1377 (1678)
+.+..++||.+.|.++.||.++ +|+|+|+ |+|||||++...+|++.|. |.+.|+
T Consensus 340 ~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSM----DKTVRLWh~~~~~CL~~F~-HndfVT 413 (712)
T KOG0283|consen 340 RKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSSSM----DKTVRLWHPGRKECLKVFS-HNDFVT 413 (712)
T ss_pred ccccCCccccCCCccccccccchhhhhccchhheecccccCC-eeEeccc----cccEEeecCCCcceeeEEe-cCCeeE
Confidence 0145678999999999999876 8999998 9999999999999999997 999999
Q ss_pred EEeecCC-CCcEEeC--CCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCC
Q 000316 1378 DICVLSS-SGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGN 1454 (1678)
Q Consensus 1378 sV~fs~~-~~~laS~--DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~ 1454 (1678)
||+|+|- +.++.|+ ||.||||++...+.+.-.+. ..
T Consensus 414 cVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl-----------------------------------------~~ 452 (712)
T KOG0283|consen 414 CVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDL-----------------------------------------RD 452 (712)
T ss_pred EEEecccCCCcEeecccccceEEeecCcCeeEeehhh-----------------------------------------hh
Confidence 9999995 5556554 99999999976554422221 13
Q ss_pred ceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCC--cccCCCcceEEEeeCCCccccCcccCCCCEEEEEec
Q 000316 1455 LYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPT--ELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLS 1532 (1678)
Q Consensus 1455 ~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~--~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~ 1532 (1678)
.||++++.|+|+..++|+.+|.+++|+....+....+..+.. .-.-...|+.+.|.+... ..|++.+.
T Consensus 453 lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~----------~~vLVTSn 522 (712)
T KOG0283|consen 453 LITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDP----------DEVLVTSN 522 (712)
T ss_pred hheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCC----------CeEEEecC
Confidence 578888889999999999999999999998777665543221 111122688888765332 46888899
Q ss_pred CCeEEEEeCCCCcEEEEEeccCCCeEEEE---cCCCCEEEEEeCCCcEEEEEcCC
Q 000316 1533 SGQCRLFDVRSGNVIASWRAHDGYVTKLA---APEDHLLVSSSLDKTLRIWDLRR 1584 (1678)
Q Consensus 1533 Dg~I~lWD~~tg~~i~~l~gH~~~V~sva---spdg~~LaSgS~DgtI~IWDl~~ 1584 (1678)
|..|||+|.++.+++..++|+...-..+. +.||++++++|.|..|+||+...
T Consensus 523 DSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~ 577 (712)
T KOG0283|consen 523 DSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKNDS 577 (712)
T ss_pred CCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeCCC
Confidence 99999999999999999997654433333 67999999999999999999744
No 356
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.91 E-value=2.4e-24 Score=251.60 Aligned_cols=195 Identities=15% Similarity=0.162 Sum_probs=158.6
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|..+.. ..+...||+|.++.. .......++. +|+.+++.++||||+++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~---~~~~~~vaik~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 70 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLP---GKKEIDVAIKTLKAG-SSDKQRLDFL--------TEASIMGQFDHPNIIRL 70 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccC---CCCcceEEEEEcCCC-CChHHHHHHH--------HHHHHHHhCCCCCcceE
Confidence 35799999999999999999986421 134568999998653 2333334455 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++.+...+..++||||+++ +|.+++.. ....++...+..++.|++.||.|||++||+||||||+|||+++++ .+||
T Consensus 71 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~--~~~l 147 (266)
T cd05033 71 EGVVTKSRPVMIITEYMENGSLDKFLRE-NDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNL--VCKV 147 (266)
T ss_pred eEEEecCCceEEEEEcCCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCC--CEEE
Confidence 9999999999999999985 99999974 334689999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++......... . .....++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 148 ~dfg~~~~~~~~~~~~---~------~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l 198 (266)
T cd05033 148 SDFGLSRRLEDSEATY---T------TKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVM 198 (266)
T ss_pred Cccchhhcccccccce---e------ccCCCCCccccChhhhccCCCccccchHHHHHHH
Confidence 9999998654111110 0 0011245679999999988999999999999654
No 357
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.91 E-value=5.3e-24 Score=227.99 Aligned_cols=276 Identities=15% Similarity=0.177 Sum_probs=223.3
Q ss_pred ccccCCCCceEe--ec---CCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCC
Q 000316 1277 SNLMKCEPWFWF--PT---PAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPG 1350 (1678)
Q Consensus 1277 ~~l~gH~~~V~~--fS---pdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~ 1350 (1678)
++-.||+-.|-. || |+|.+ |+++|.|+.=.+-+-+ |.-+.++.||.++|++.+...|...-+|++.
T Consensus 8 l~c~ghtrpvvdl~~s~itp~g~f-----lisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaa--- 79 (334)
T KOG0278|consen 8 LTCHGHTRPVVDLAFSPITPDGYF-----LISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAA--- 79 (334)
T ss_pred eEEcCCCcceeEEeccCCCCCceE-----EEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcc---
Confidence 456688887763 55 56665 9999999987776655 7789999999999999999999999999998
Q ss_pred CCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCce-eEEecccCccccccCCCCCCcc
Q 000316 1351 FKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKL-LSVFAEQSMDSLHGGSPSSSIS 1427 (1678)
Q Consensus 1351 ~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~-~~~l~~~~~~~~~~~s~s~~~~ 1427 (1678)
|=+.+|||.-+|..+.+|. |...|.+++|+.+..++ ++.++-+||||++..+- ...+
T Consensus 80 -dftakvw~a~tgdelhsf~-hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~------------------ 139 (334)
T KOG0278|consen 80 -DFTAKVWDAVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEI------------------ 139 (334)
T ss_pred -cchhhhhhhhhhhhhhhhh-hhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhh------------------
Confidence 8999999999999999887 99999999999998888 44499999999875431 1222
Q ss_pred ccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEE
Q 000316 1428 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAI 1507 (1678)
Q Consensus 1428 ~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sv 1507 (1678)
.++++.|..+.|.- ..+.+++++.|++||+||.++|..++++. +...|+++
T Consensus 140 ------------~ghtg~Ir~v~wc~----------eD~~iLSSadd~tVRLWD~rTgt~v~sL~-------~~s~VtSl 190 (334)
T KOG0278|consen 140 ------------SGHTGGIRTVLWCH----------EDKCILSSADDKTVRLWDHRTGTEVQSLE-------FNSPVTSL 190 (334)
T ss_pred ------------cCCCCcceeEEEec----------cCceEEeeccCCceEEEEeccCcEEEEEe-------cCCCCcce
Confidence 23455555555543 46788888999999999999999999887 34556666
Q ss_pred EeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCC
Q 000316 1508 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNW 1586 (1678)
Q Consensus 1508 a~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~ 1586 (1678)
-++ ++|.+ ++-...+.|.+||..+-..++.++. ...|.+.. +|+...+++|+.|..++.||..++
T Consensus 191 Evs-----------~dG~i-lTia~gssV~Fwdaksf~~lKs~k~-P~nV~SASL~P~k~~fVaGged~~~~kfDy~Tg- 256 (334)
T KOG0278|consen 191 EVS-----------QDGRI-LTIAYGSSVKFWDAKSFGLLKSYKM-PCNVESASLHPKKEFFVAGGEDFKVYKFDYNTG- 256 (334)
T ss_pred eec-----------cCCCE-EEEecCceeEEeccccccceeeccC-ccccccccccCCCceEEecCcceEEEEEeccCC-
Confidence 553 33444 4555567899999999999888774 34577766 899999999999999999999998
Q ss_pred CCCCeEe-ecCCCCEEE--EEecCCEEEEEeCCC-eEEEecC
Q 000316 1587 PSQPTVF-KGHTNGISG--FSVWGQDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1587 ~~~~~~l-~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~ 1624 (1678)
..+..+ +||-++|.| |||||...++||.|| |++|.+.
T Consensus 257 -eEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~ 297 (334)
T KOG0278|consen 257 -EEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTT 297 (334)
T ss_pred -ceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEec
Confidence 444444 999999997 999999999999999 9999975
No 358
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.91 E-value=2.8e-23 Score=227.74 Aligned_cols=283 Identities=16% Similarity=0.295 Sum_probs=226.6
Q ss_pred cccccCCCCceEeecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCe
Q 000316 1276 TSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGT 1354 (1678)
Q Consensus 1276 ~~~l~gH~~~V~~fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~Dgt 1354 (1678)
...+.||.+-||-.+.+... .+++++|.|.+.+||.++ |.|+.++.||.++|+||+|++.+.++++||. |++
T Consensus 141 vre~~GHkDGiW~Vaa~~tq---pi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSG----D~t 213 (481)
T KOG0300|consen 141 VRELEGHKDGIWHVAADSTQ---PICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASG----DET 213 (481)
T ss_pred hhhhcccccceeeehhhcCC---cceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccC----Ccc
Confidence 45689999999987766543 469999999999999999 8999999999999999999999999999997 899
Q ss_pred EEEEeC------CC------------------------------C----eEEEEEecCCccEEEEeecCCCCcE--EeCC
Q 000316 1355 VQKWEL------TR------------------------------I----NCVSGYYGHEEVVNDICVLSSSGRI--ASCD 1392 (1678)
Q Consensus 1355 VrlWDl------~t------------------------------g----~~l~~l~gH~~~V~sV~fs~~~~~l--aS~D 1392 (1678)
..||.. .. | .++..++||.+.|.+..|...+..+ +|.|
T Consensus 214 aHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWD 293 (481)
T KOG0300|consen 214 AHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWD 293 (481)
T ss_pred hHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeecc
Confidence 999972 10 0 2466789999999999999888876 7889
Q ss_pred CcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEE
Q 000316 1393 GTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGI 1472 (1678)
Q Consensus 1393 gtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs 1472 (1678)
.|..+||+++|+.+..+.+|.....++ ..+|..+++++++
T Consensus 294 RTAnlwDVEtge~v~~LtGHd~ELtHc----------------------------------------stHptQrLVvTsS 333 (481)
T KOG0300|consen 294 RTANLWDVETGEVVNILTGHDSELTHC----------------------------------------STHPTQRLVVTSS 333 (481)
T ss_pred ccceeeeeccCceeccccCcchhcccc----------------------------------------ccCCcceEEEEec
Confidence 999999999999999999876442222 2234577889999
Q ss_pred CCCcEEEEECCCC-eeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCC-cEEEEE
Q 000316 1473 GNGSLRFIDINQG-QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG-NVIASW 1550 (1678)
Q Consensus 1473 ~DgtVrlWDl~tg-~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg-~~i~~l 1550 (1678)
.|-+.++||.+.. ..+..|+|| ...|+++.|.. +..+++|++|.+|++||+++. .++.++
T Consensus 334 rDtTFRLWDFReaI~sV~VFQGH------tdtVTS~vF~~------------dd~vVSgSDDrTvKvWdLrNMRsplATI 395 (481)
T KOG0300|consen 334 RDTTFRLWDFREAIQSVAVFQGH------TDTVTSVVFNT------------DDRVVSGSDDRTVKVWDLRNMRSPLATI 395 (481)
T ss_pred cCceeEeccchhhcceeeeeccc------ccceeEEEEec------------CCceeecCCCceEEEeeeccccCcceee
Confidence 9999999999843 345667755 45577777742 246999999999999999985 577888
Q ss_pred eccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCC--CeEeecCCCCEEE--EEec--CCEEEEEeCCC-eEEEe
Q 000316 1551 RAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQ--PTVFKGHTNGISG--FSVW--GQDVISISNNK-IGLSS 1622 (1678)
Q Consensus 1551 ~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~--~~~l~gH~~~V~a--fSpd--g~~LaSgs~D~-I~vwd 1622 (1678)
+ -+.+++.++ +..+..++---.+..|++||+...+... ...-.||...|.| |..+ -.-|.+|+-|+ +.=|+
T Consensus 396 R-tdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~ 474 (481)
T KOG0300|consen 396 R-TDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWK 474 (481)
T ss_pred e-cCCccceeEeecCCceEEeccCCceEEEEecCCCccccCCcccccccceeeeeeeccccCcccccccccccceeeeeE
Confidence 7 477899999 6666688888788899999997654221 1245789998986 4433 24578888888 88898
Q ss_pred cC
Q 000316 1623 LS 1624 (1678)
Q Consensus 1623 l~ 1624 (1678)
+.
T Consensus 475 in 476 (481)
T KOG0300|consen 475 IN 476 (481)
T ss_pred ec
Confidence 75
No 359
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.91 E-value=2.9e-24 Score=250.03 Aligned_cols=189 Identities=15% Similarity=0.141 Sum_probs=156.6
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|+++++||+|+||.||+|... ++..+|+|.+..... ....+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~v~iK~~~~~~~---~~~~~~--------~e~~~l~~l~h~~i~~~ 66 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-------NSTKVAVKTLKPGTM---SVQAFL--------EEANLMKTLQHDKLVRL 66 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-------CCceEEEEEccCCch---hHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 468999999999999999999853 456799999765322 223344 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+.+..++||||++ ++|.+++.......++...+..++.|++.||+|||+++++||||||+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~--~~~l 144 (261)
T cd05072 67 YAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESL--MCKI 144 (261)
T ss_pred EEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCC--cEEE
Confidence 999999999999999998 5999999865556788899999999999999999999999999999999999999 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++........ ......++..|+|||.+....++.++|+|+.|++.
T Consensus 145 ~dfg~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 194 (261)
T cd05072 145 ADFGLARVIEDNEYT----------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL 194 (261)
T ss_pred CCCccceecCCCcee----------ccCCCccceecCCHHHhccCCCChhhhhhhhHHHH
Confidence 999999864321110 01112245679999999888899999999999554
No 360
>PHA02988 hypothetical protein; Provisional
Probab=99.91 E-value=1.7e-24 Score=256.01 Aligned_cols=184 Identities=10% Similarity=0.010 Sum_probs=149.8
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEe-
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT- 246 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~- 246 (1678)
..||+|++|.||+|.. ++..||||.++..........+... +|+.+|++++|||||++++++.+
T Consensus 26 ~~i~~g~~~~v~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~-------~E~~~l~~l~h~nIv~~~g~~~~~ 90 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--------NNKEVIIRTFKKFHKGHKVLIDITE-------NEIKNLRRIDSNNILKIYGFIIDI 90 (283)
T ss_pred eEEeeCCceEEEEEEE--------CCEEEEEEeccccccccHHHHHHHH-------HHHHHHHhcCCCCEEEEeeeEEec
Confidence 5799999999999983 5789999999765333322222222 99999999999999999999977
Q ss_pred ---CCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCCeEecCCCceeEEEEe
Q 000316 247 ---SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 247 ---~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
...+++||||++| +|.+++. ....++......++.|++.||.|||+ .+++||||||+|||++.++ .+||+|
T Consensus 91 ~~~~~~~~lv~Ey~~~g~L~~~l~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~--~~kl~d 166 (283)
T PHA02988 91 VDDLPRLSLILEYCTRGYLREVLD--KEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENY--KLKIIC 166 (283)
T ss_pred ccCCCceEEEEEeCCCCcHHHHHh--hCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCC--cEEEcc
Confidence 3478999999995 9999998 34568888999999999999999998 5999999999999999999 899999
Q ss_pred cCCcccCCCCCcccccCCCCcceeecccccCccccccccccc--ccccccccccccCccchhhhHh
Q 000316 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS--MDWHSQFNRWWRGELSNFEYLL 385 (1678)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~--~~y~~~~d~W~~G~isnfeyL~ 385 (1678)
||+++...... . ...++..|+|||++.+ ..|+.++|+|+.|.+. |+.++
T Consensus 167 fg~~~~~~~~~--------~------~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil-~el~~ 217 (283)
T PHA02988 167 HGLEKILSSPP--------F------KNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVL-WEIFT 217 (283)
T ss_pred cchHhhhcccc--------c------cccCcccccCHHHhhhccccccchhhhhHHHHHH-HHHHH
Confidence 99998543110 0 1236789999999976 6899999999999554 44443
No 361
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.91 E-value=3e-24 Score=262.04 Aligned_cols=188 Identities=19% Similarity=0.243 Sum_probs=156.2
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++.+.||+|+||.||+|.+. .++..+|+|.+.+.........++. +|+.+++.++||||++
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~ 79 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDT------VTGQNVAIKKLSRPFQNVTHAKRAY--------RELVLMKLVNHKNIIG 79 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEEC------CCCCEEEEEecCccccChhHHHHHH--------HHHHHHHhcCCCCCcc
Confidence 4678999999999999999999965 4688999999865332333333333 8999999999999999
Q ss_pred eeeEEEeCC------eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC
Q 000316 240 VLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 240 l~~~~~~~~------~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g 313 (1678)
++++|.... ..|+||||++++|.+.+.. . +++..+..++.|++.||+|||++||+||||||+|||++.++
T Consensus 80 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~ 155 (353)
T cd07850 80 LLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM--D--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 155 (353)
T ss_pred eeeeeccCCCccccCcEEEEEeccCCCHHHHHhh--c--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC
Confidence 999987543 5799999999999998872 2 88999999999999999999999999999999999999999
Q ss_pred ceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
.+||+|||+++....... .....+++.|+|||++.+..++.++|+|+.|++.
T Consensus 156 --~~kL~Dfg~~~~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l 207 (353)
T cd07850 156 --TLKILDFGLARTAGTSFM------------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 207 (353)
T ss_pred --CEEEccCccceeCCCCCC------------CCCCcccccccCHHHHhCCCCCCchhhHhHHHHH
Confidence 899999999985432100 1112367889999999999999999999999553
No 362
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.91 E-value=4.8e-25 Score=251.72 Aligned_cols=201 Identities=17% Similarity=0.204 Sum_probs=166.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCC--Cc--
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH--PN-- 236 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~H--pN-- 236 (1678)
..+|++++.+|+|+||.|-++.+. +.+..||||+++.-.... ..+.-|+++|+++.+ ||
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~------~~~~~vAlKIik~V~kYr-----------eAa~iEi~vLqki~~~DP~g~ 150 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDR------ETKEHVALKIIKNVDKYR-----------EAALIEIEVLQKINESDPNGK 150 (415)
T ss_pred ccceehhhhhcCCcccceEEEeec------CCCceehHHHHHHHHHHh-----------hHHHHHHHHHHHHHhcCCCCc
Confidence 568999999999999999999976 458899999986421111 123379999999943 43
Q ss_pred --ccceeeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 237 --VAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 237 --IV~l~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
+|++.++|.-.++.|||+|.++-++++++..+...+++..+++.+.+||+.+++|||+.+++|-||||||||+.+...
T Consensus 151 ~rcv~m~~wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~ 230 (415)
T KOG0671|consen 151 FRCVQMRDWFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEY 230 (415)
T ss_pred eEEEeeehhhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccce
Confidence 889999999999999999999889999999877888999999999999999999999999999999999999853211
Q ss_pred ------------------eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccC
Q 000316 315 ------------------SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 376 (1678)
Q Consensus 315 ------------------~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G 376 (1678)
..|||+|||.|++..... +..++|..|+|||++.+.+|+..+|+|+.|
T Consensus 231 ~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h--------------s~iVsTRHYRAPEViLgLGwS~pCDvWSiG 296 (415)
T KOG0671|consen 231 FKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH--------------STIVSTRHYRAPEVILGLGWSQPCDVWSIG 296 (415)
T ss_pred EEEeccCCccceeccCCCcceEEEecCCcceeccCc--------------ceeeeccccCCchheeccCcCCccCceeee
Confidence 268999999999755321 123578999999999999999999999999
Q ss_pred ccchhhhHhhhccccCC
Q 000316 377 ELSNFEYLLFLNKLAGR 393 (1678)
Q Consensus 377 ~isnfeyL~~ln~~aGR 393 (1678)
||. +||.++.-.|.+.
T Consensus 297 CIL-~ElytG~~LFqtH 312 (415)
T KOG0671|consen 297 CIL-VELYTGETLFQTH 312 (415)
T ss_pred eEE-EEeeccceecccC
Confidence 998 6666655555543
No 363
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.91 E-value=3.8e-24 Score=249.64 Aligned_cols=190 Identities=17% Similarity=0.175 Sum_probs=157.6
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++.++||+|+||.||+|.++ ..+..+|+|.+.... ....++. +|+++++.++||||+++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~------~~~~~~~~K~~~~~~---~~~~~~~--------~e~~~l~~l~h~~i~~~ 67 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWK------KYSLTVAVKTLKEDT---MEVEEFL--------KEAAVMKEIKHPNLVQL 67 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEe------cCCceEEEEEecCCc---hHHHHHH--------HHHHHHHhCCCCChhhe
Confidence 346999999999999999999964 467889999986432 2233444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++..++.+++||||++ ++|.+++.......+++..++.++.|++.||+|||++||+||||||+|||+++++ .+||
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~--~~kl 145 (263)
T cd05052 68 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH--LVKV 145 (263)
T ss_pred EEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCC--cEEe
Confidence 999999999999999998 5999999854555688999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++......... ......+..|+|||.+.+..++.++|+|+.|++.
T Consensus 146 ~df~~~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 195 (263)
T cd05052 146 ADFGLSRLMTGDTYTA----------HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL 195 (263)
T ss_pred CCCccccccccceeec----------cCCCCCccccCCHHHhccCCCCchhHHHHHHHHH
Confidence 9999998644211100 0011235679999999999999999999999554
No 364
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.91 E-value=2.5e-24 Score=251.69 Aligned_cols=196 Identities=16% Similarity=0.193 Sum_probs=157.1
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++.+.||+|+||.||+|+++.. ...+..+|+|.++... .......+. +|+.+++.++||||+++
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~---~~~~~~~~ik~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 70 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLP---GKREIPVAIKTLKAGY-TEKQRRDFL--------SEASIMGQFDHPNIIHL 70 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecC---CCCceEEEEEECCCCC-CHHHHHHHH--------HHHHHHHhCCCCCcceE
Confidence 35799999999999999999986421 1245689999986532 222333444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+++..|+||||+++ +|.+++.. ....++...+..++.|++.||.|||++||+||||||+|||++.++ .+||
T Consensus 71 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~--~~~l 147 (267)
T cd05066 71 EGVVTKSKPVMIVTEYMENGSLDAFLRK-HDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNL--VCKV 147 (267)
T ss_pred EEEEecCCccEEEEEcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCC--eEEe
Confidence 9999999999999999985 99999984 335689999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++.......... . ...-.++..|+|||.+.+..++.+.|+|+.|.+.
T Consensus 148 ~dfg~~~~~~~~~~~~~--~------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l 199 (267)
T cd05066 148 SDFGLSRVLEDDPEAAY--T------TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVM 199 (267)
T ss_pred CCCCcccccccccceee--e------cCCCccceeecCHhHhccCccCchhhhHHHHHHH
Confidence 99999986442111000 0 0011124579999999988999999999999664
No 365
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.91 E-value=4.5e-24 Score=249.11 Aligned_cols=199 Identities=19% Similarity=0.166 Sum_probs=161.4
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH-HHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
++|++.+.||+|+||.||+|++. .++..||+|.+........ ....+. +|+.+++.++||||+++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 67 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCL------LDRKPVALKKVQIFEMMDAKARQDCV--------KEIDLLKQLNHPNVIKY 67 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEe------CCCCEEEEEEeeccccCCHHHHHHHH--------HHHHHHHhCCCcceeee
Confidence 57999999999999999999965 4678999998865332222 223344 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++++.+.+..++||||+++ +|.+++... ....+++..+..++.||+.||.|||++||+||||||+||+++.++ .+
T Consensus 68 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~--~~ 145 (267)
T cd08228 68 LDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATG--VV 145 (267)
T ss_pred eeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCC--CE
Confidence 9999999999999999995 999888642 234578999999999999999999999999999999999999998 89
Q ss_pred EEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCC
Q 000316 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1678)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs 394 (1678)
+|+|||+++....... ......+++.|+|||.+.+..++.++|+|+.|.+ .+..++|+.
T Consensus 146 ~l~d~g~~~~~~~~~~-----------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~-------l~el~~g~~ 204 (267)
T cd08228 146 KLGDLGLGRFFSSKTT-----------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCL-------LYEMAALQS 204 (267)
T ss_pred EECccccceeccchhH-----------HHhcCCCCccccChhhhccCCCCchhhHHHHHHH-------HHHHhcCCC
Confidence 9999999886432110 0111236788999999988889999999999944 444455554
No 366
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.91 E-value=4.4e-24 Score=247.90 Aligned_cols=187 Identities=16% Similarity=0.187 Sum_probs=154.0
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++.+.||+|+||.||++..+ ++..+|+|.+...... ..++. +|+.+|+.++||||++++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-------~~~~~a~K~~~~~~~~---~~~~~--------~e~~~l~~l~h~~i~~~~ 65 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-------AQIKVAIKAINEGAMS---EEDFI--------EEAKVMMKLSHPKLVQLY 65 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-------cCceEEEEecccCCcc---HHHHH--------HHHHHHHHCCCCCceeEE
Confidence 56899999999999999999853 3457999988654322 23344 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++...+..++||||++ |+|.+++... ...+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 66 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~--~~kl~ 142 (256)
T cd05114 66 GVCTQQKPLYIVTEFMENGCLLNYLRQR-QGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTG--VVKVS 142 (256)
T ss_pred EEEccCCCEEEEEEcCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCC--eEEEC
Confidence 99999999999999998 5999998742 34588999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||+++........ ......++..|+|||++.+..++.++|+|+.|.+.
T Consensus 143 d~g~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l 191 (256)
T cd05114 143 DFGMTRYVLDDEYT----------SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLM 191 (256)
T ss_pred CCCCccccCCCcee----------ccCCCCCchhhCChhhcccCccchhhhhHHHHHHH
Confidence 99999854321110 01112245679999999988999999999999553
No 367
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.91 E-value=1.5e-24 Score=254.99 Aligned_cols=198 Identities=15% Similarity=0.085 Sum_probs=158.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|.+.+.||+|+||.||+|.+... ....++..+|+|.++... .......+. +|+++|+.++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~~~~~~~vaiK~~~~~~-~~~~~~~~~--------~e~~~l~~l~~~~i~~~ 73 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHL-EPENDKELVAVKTLKETA-SNDARKDFE--------REAELLTNFQHENIVKF 73 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccc-cCcCCcceEEEEeecccC-CHHHHHHHH--------HHHHHHHhcCCCCchhe
Confidence 45699999999999999999985321 112456889999986532 222333444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCe
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSP------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 307 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NI 307 (1678)
++++......++||||++| +|.+++.... ...+++..+..++.|++.||.|||++||+||||||+||
T Consensus 74 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~ni 153 (280)
T cd05049 74 YGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNC 153 (280)
T ss_pred eeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceE
Confidence 9999999999999999995 9999997421 23478889999999999999999999999999999999
Q ss_pred EecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 308 LLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 308 Ll~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+++.++ .+||+|||+++......... ......+++.|+|||++.+..++.++|+|+.|.+.
T Consensus 154 li~~~~--~~kl~d~g~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 214 (280)
T cd05049 154 LVGYDL--VVKIGDFGMSRDVYTTDYYR---------VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVL 214 (280)
T ss_pred EEcCCC--eEEECCcccceecccCccee---------cCCCCcccceecChhhhccCCcchhhhHHHHHHHH
Confidence 999999 99999999997543211100 01112246789999999999999999999999654
No 368
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.91 E-value=3.6e-24 Score=250.59 Aligned_cols=198 Identities=15% Similarity=0.185 Sum_probs=157.6
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++.+.||+|+||.||+|..+. .......||+|.+... .......++. +|+.+++.++||||+++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~---~~~~~~~vaiK~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~ni~~~ 70 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKL---PGKREIFVAIKTLKSG-YTEKQRRDFL--------SEASIMGQFDHPNIIHL 70 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEec---CCCCceeEEEEEcCCC-CCHHHHHHHH--------HHHHHHHhCCCcCcceE
Confidence 3468999999999999999999652 1123467999998653 2333344554 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.++...++||||+++ +|.+++.. ..+.++...++.++.|++.||.|||++|++||||||+||+++.++ .+||
T Consensus 71 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~--~~kl 147 (269)
T cd05065 71 EGVVTKSRPVMIITEFMENGALDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNL--VCKV 147 (269)
T ss_pred EEEECCCCceEEEEecCCCCcHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCC--cEEE
Confidence 9999999999999999985 99999874 345689999999999999999999999999999999999999988 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++......... ... .......+..|+|||.+.+..++.++|+|+.|++.
T Consensus 148 ~dfg~~~~~~~~~~~~----~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l 201 (269)
T cd05065 148 SDFGLSRFLEDDTSDP----TYT--SSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVM 201 (269)
T ss_pred CCCccccccccCcccc----ccc--cccCCCcceeecCHhHhccCcccchhhhhhhHHHH
Confidence 9999988543211100 000 00011124579999999999999999999999664
No 369
>PTZ00420 coronin; Provisional
Probab=99.91 E-value=1.7e-22 Score=253.93 Aligned_cols=246 Identities=11% Similarity=0.063 Sum_probs=182.3
Q ss_pred EEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecC-CCEEEEEecCCCCCCeEEEEeCCCCe--------EEEEEecC
Q 000316 1303 RVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQD-ECTVFTAGIGPGFKGTVQKWELTRIN--------CVSGYYGH 1372 (1678)
Q Consensus 1303 sgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspd-g~~LaSgS~d~~~DgtVrlWDl~tg~--------~l~~l~gH 1372 (1678)
.|+.++.+++|+.. ...+..+.||.+.|.+++|+|+ +.+|+|||. |++|+|||+.++. ++..+.+|
T Consensus 49 gGG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~----DgtIrIWDi~t~~~~~~~i~~p~~~L~gH 124 (568)
T PTZ00420 49 GGGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSE----DLTIRVWEIPHNDESVKEIKDPQCILKGH 124 (568)
T ss_pred CCCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeC----CCeEEEEECCCCCccccccccceEEeecC
Confidence 35567889999976 5578899999999999999997 789999997 9999999997642 34578899
Q ss_pred CccEEEEeecCCCCcE-E--eCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEe
Q 000316 1373 EEVVNDICVLSSSGRI-A--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILST 1449 (1678)
Q Consensus 1373 ~~~V~sV~fs~~~~~l-a--S~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv 1449 (1678)
...|.+|+|+|++..+ + +.|++|+|||+++++.+..+..
T Consensus 125 ~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~-------------------------------------- 166 (568)
T PTZ00420 125 KKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINM-------------------------------------- 166 (568)
T ss_pred CCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEec--------------------------------------
Confidence 9999999999988764 3 4599999999999876654431
Q ss_pred eecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEE
Q 000316 1450 AFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAA 1529 (1678)
Q Consensus 1450 ~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~Las 1529 (1678)
+..+++++|+++|..+++++.|++|++||+++++.+.++.+|.+. +.+.++. .+++.+++.++++
T Consensus 167 ---~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~------~~s~~v~------~~~fs~d~~~IlT 231 (568)
T PTZ00420 167 ---PKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGG------KNTKNIW------IDGLGGDDNYILS 231 (568)
T ss_pred ---CCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCC------ceeEEEE------eeeEcCCCCEEEE
Confidence 112567777788999999999999999999999999999877643 2222211 1122345678888
Q ss_pred EecCC----eEEEEeCCC-CcEEEEEe--ccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE
Q 000316 1530 GLSSG----QCRLFDVRS-GNVIASWR--AHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS 1601 (1678)
Q Consensus 1530 Gs~Dg----~I~lWD~~t-g~~i~~l~--gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~ 1601 (1678)
++.|+ .|+|||+++ ++++..+. .+.+.+.... .++|.++++|+.|++|++|++..+....+..+. +..++.
T Consensus 232 tG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~~~~l~~~~-s~~p~~ 310 (568)
T PTZ00420 232 TGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGSIRKVNEYK-SCSPFR 310 (568)
T ss_pred EEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCcEEeecccc-cCCCcc
Confidence 77664 799999995 56666554 2334444444 567889999999999999999876322222222 334444
Q ss_pred --EEEec
Q 000316 1602 --GFSVW 1606 (1678)
Q Consensus 1602 --afSpd 1606 (1678)
+|.|.
T Consensus 311 g~~f~Pk 317 (568)
T PTZ00420 311 SFGFLPK 317 (568)
T ss_pred ceEEccc
Confidence 46664
No 370
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.91 E-value=6.7e-24 Score=247.69 Aligned_cols=193 Identities=15% Similarity=0.122 Sum_probs=154.6
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh--HHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG--QESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
.+|++.+.||+|+||.||++.+. .++..||+|.+....... ....+.+. +|+.+++.++||||++
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~------~~~~~v~ik~~~~~~~~~~~~~~~~~~~-------~E~~~l~~l~h~~i~~ 68 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDA------DTGRELAVKQVQFDPESPETSKEVNALE-------CEIQLLKNLLHERIVQ 68 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEc------CCCcEEEEEEeecCcCCcccHHHHHHHH-------HHHHHHHhcCCCCeee
Confidence 57999999999999999999964 567899999986432221 11122222 8999999999999999
Q ss_pred eeeEEEeC--CeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCcee
Q 000316 240 VLGLLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1678)
Q Consensus 240 l~~~~~~~--~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~ 316 (1678)
+++++.+. ..+++||||++| +|.+++. ....+++..++.++.|++.||.|||++||+||||||+||+++.++ .
T Consensus 69 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~--~ 144 (265)
T cd06652 69 YYGCLRDPMERTLSIFMEHMPGGSIKDQLK--SYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVG--N 144 (265)
T ss_pred EEeEeccCCCceEEEEEEecCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCC--C
Confidence 99998764 478899999985 9999987 335578899999999999999999999999999999999999998 8
Q ss_pred EEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 317 lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+||+|||+++......... .. .....++..|+|||.+.+..++.++|+|+.|++.
T Consensus 145 ~~l~Dfg~~~~~~~~~~~~--~~------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 199 (265)
T cd06652 145 VKLGDFGASKRLQTICLSG--TG------MKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTV 199 (265)
T ss_pred EEECcCccccccccccccc--cc------cccCCCCccccChhhhcCCCCCcchhHHHHHHHH
Confidence 9999999998543211000 00 1112367889999999888899999999999553
No 371
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.91 E-value=6.3e-25 Score=237.51 Aligned_cols=199 Identities=16% Similarity=0.125 Sum_probs=156.1
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+|+-||+++. ..++..+|+|++.-.. .++.++.+ +|++..++++||||+++
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~------~s~~~~YAlKkI~c~~--~~~~e~~~--------rEid~~rkf~s~~vl~l 83 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKG------LSTGHLYALKKILCHS--QEDIEEAL--------REIDNHRKFNSPNVLRL 83 (302)
T ss_pred CceEEEeeeecCCCceeeeeecc------cCcccchhhheeeccc--hHHHHHHH--------HHHHHHHhhCCcchHHH
Confidence 56899999999999999999983 3678999999986532 23334444 99999999999999999
Q ss_pred eeEEEeCC-----eEEEeccCCC-CCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCCeEec
Q 000316 241 LGLLKTSG-----LITSVIPKTP-YTLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLG--IAHRSVCPSNVLLT 310 (1678)
Q Consensus 241 ~~~~~~~~-----~~~lVmEy~~-g~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~g--IiHRDLKP~NILl~ 310 (1678)
+++...+. ..||+++|.. |+|.+.|+.. ++..++|.++..|+.+|++||++||+.. ..||||||.|||++
T Consensus 84 ~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls 163 (302)
T KOG2345|consen 84 VDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLS 163 (302)
T ss_pred HHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEec
Confidence 98765433 5999999987 8999999863 3446999999999999999999999998 99999999999999
Q ss_pred CCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccccc---ccccccccccccCccc
Q 000316 311 DSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS---MDWHSQFNRWWRGELS 379 (1678)
Q Consensus 311 ~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~---~~y~~~~d~W~~G~is 379 (1678)
+++ .++|.|||.++.....-........-.-+.... .|..|+|||++.- ...+.++|+|+.||..
T Consensus 164 ~~~--~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~--Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtL 231 (302)
T KOG2345|consen 164 DSG--LPVLMDLGSATQAPIQIEGSRQALRLQEWAEER--CTIPYRAPELFNVKSHCTITERTDIWSLGCTL 231 (302)
T ss_pred CCC--ceEEEeccCccccceEeechHHHHHHHHHHHHh--CCCcccCchheecccCcccccccchhhhhHHH
Confidence 988 899999999986543211111111111111112 3678999999874 4467899999999764
No 372
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.91 E-value=8.1e-24 Score=249.63 Aligned_cols=194 Identities=16% Similarity=0.133 Sum_probs=153.1
Q ss_pred CCe-eEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 162 TAL-FPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 162 ~~y-~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
++| ++++.||+|+||+||++... .....++..+|+|.++... .......+. +|+++|+.++||||+++
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~~~~vaiK~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~i~~~ 71 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYD--PANDGTGEMVAVKTLKREC-GQQNTSGWK--------KEINILKTLYHENIVKY 71 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEc--cccCCCCceEEEEEecccc-ChHHHHHHH--------HHHHHHHhCCCCCEeeE
Confidence 455 99999999999999987632 1223467889999987542 222233444 89999999999999999
Q ss_pred eeEEEeC--CeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 241 LGLLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 241 ~~~~~~~--~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++++... ..+++||||+++ +|.+++.. ..+++..++.++.|++.||.|||++||+||||||+|||++.++ .+
T Consensus 72 ~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~ 146 (283)
T cd05080 72 KGCCSEQGGKGLQLIMEYVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDR--LV 146 (283)
T ss_pred EEEEecCCCceEEEEecCCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCC--cE
Confidence 9988753 468999999995 99999973 3589999999999999999999999999999999999999998 89
Q ss_pred EEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
||+|||+++........... .....++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 147 ~l~dfg~~~~~~~~~~~~~~--------~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l 200 (283)
T cd05080 147 KIGDFGLAKAVPEGHEYYRV--------REDGDSPVFWYAVECLKENKFSYASDVWSFGVTL 200 (283)
T ss_pred EEeecccccccCCcchhhcc--------CCCCCCCceeeCHhHhcccCCCcccccHHHHHHH
Confidence 99999999864421111000 0112245679999999888899999999999543
No 373
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.91 E-value=1e-24 Score=229.51 Aligned_cols=200 Identities=19% Similarity=0.243 Sum_probs=162.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhc-cCCCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG-CLRHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~-~l~HpNIV~ 239 (1678)
.++...+..||+|+||.|-+.++. .+|.+.|+|.+... ...+..++.+ +|+.+.. ....|.+|.
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~------~sg~imAvKri~~t-vn~q~q~r~L--------~dldi~~r~~~CPf~V~ 109 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHI------QSGTIMAVKRIRAT-VNSQEQKRLL--------MDLDIIMRTVDCPFTVH 109 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeec------cCCeEEEEeeehhh-cChHHHHHHH--------HhhhhhccCCCCCeEEE
Confidence 456778899999999999988865 68999999999764 3444455555 7887654 447899999
Q ss_pred eeeEEEeCCeEEEeccCCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCCeEecCCCcee
Q 000316 240 VLGLLKTSGLITSVIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSL-GIAHRSVCPSNVLLTDSCWSW 316 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHRDLKP~NILl~~~g~~~ 316 (1678)
+||.+.....++|.||.|..+|..+.+. ..++.++|..+-.++..++.||+|||++ .|||||+||+||||+.+| +
T Consensus 110 FyGa~~regdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~G--q 187 (282)
T KOG0984|consen 110 FYGALFREGDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDG--Q 187 (282)
T ss_pred eehhhhccccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCC--c
Confidence 9999999999999999999888777653 4677899999999999999999999995 899999999999999999 9
Q ss_pred EEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc----cccccccccccccCccchhhhHhhhccccC
Q 000316 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ----SMDWHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1678)
Q Consensus 317 lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~----~~~y~~~~d~W~~G~isnfeyL~~ln~~aG 392 (1678)
+||||||++...... ...+...+| -.|||||.+. ...|+-++|+|+.| ++.+++..+
T Consensus 188 VKiCDFGIsG~L~dS----iAkt~daGC--------kpYmaPEri~~e~n~~gY~vksDvWSLG-------ItmiElA~l 248 (282)
T KOG0984|consen 188 VKICDFGISGYLVDS----IAKTMDAGC--------KPYMAPERINPELNQKGYSVKSDVWSLG-------ITMIEMAIL 248 (282)
T ss_pred EEEcccccceeehhh----hHHHHhcCC--------CccCChhhcCcccCcccceeehhhhhhh-------hhhhhhhhc
Confidence 999999999875531 111112222 3799999875 45799999999999 677777777
Q ss_pred CCCC
Q 000316 393 RRWG 396 (1678)
Q Consensus 393 Rs~~ 396 (1678)
|-..
T Consensus 249 r~PY 252 (282)
T KOG0984|consen 249 RFPY 252 (282)
T ss_pred cccc
Confidence 7443
No 374
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.91 E-value=6.1e-24 Score=248.49 Aligned_cols=194 Identities=15% Similarity=0.123 Sum_probs=153.8
Q ss_pred eeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeE
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1678)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~ 243 (1678)
|++++.||+|+||.||+|.... ....+..+|+|.++..........++. +|+.+++.++||||++++++
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~---~~~~~~~vaiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~iv~~~~~ 69 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQ---DDGSQLKVAVKTMKLDIHTYSEIEEFL--------SEAACMKDFDHPNVMKLIGV 69 (273)
T ss_pred CccccccCcCCCceEEEEEEec---CCCCcceEEEEEeccCcCCHHHHHHHH--------HHHHHHHhCCCCCeeeEEee
Confidence 5788999999999999998642 112457899999876544444444454 89999999999999999998
Q ss_pred EEeCCe------EEEeccCCC-CCHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCC
Q 000316 244 LKTSGL------ITSVIPKTP-YTLENILQFS----PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1678)
Q Consensus 244 ~~~~~~------~~lVmEy~~-g~L~~~l~~~----~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 312 (1678)
+..... .++||||++ |+|..++... ....+++..+..++.|++.||.|||++||+||||||+||+++++
T Consensus 70 ~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~ 149 (273)
T cd05035 70 CFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLRED 149 (273)
T ss_pred eccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCC
Confidence 866553 799999999 5999988542 23468999999999999999999999999999999999999999
Q ss_pred CceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 313 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 313 g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+ .+||+|||+++......... .. ....++..|+|||.+.+..++.++|+|+.|++.
T Consensus 150 ~--~~kl~dfg~~~~~~~~~~~~---~~------~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il 205 (273)
T cd05035 150 M--TVCVADFGLSKKIYSGDYYR---QG------RIAKMPVKWIAIESLADRVYTSKSDVWAFGVTM 205 (273)
T ss_pred C--eEEECCccceeecccccccc---cc------ccccCCccccCHhhcccCCCCcccchHHHHHHH
Confidence 8 89999999998643211100 00 011235679999999988999999999999664
No 375
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.91 E-value=1e-23 Score=249.96 Aligned_cols=198 Identities=16% Similarity=0.184 Sum_probs=158.1
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
.++|++.+.||+|+||.||++...... .......+|+|.+.... ......++. +|+.+++.+ +||||++
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~-~~~~~~~~a~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~~h~~i~~ 80 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLD-NPNETSTVAVKMLKDDA-TEKDLSDLV--------SEMEMMKMIGKHKNIIN 80 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCC-CCCCceeEEEEEccCCC-CHHHHHHHH--------HHHHHHHhhcCCCCeee
Confidence 457999999999999999999864211 12345789999987542 223333444 899999999 8999999
Q ss_pred eeeEEEeCCeEEEeccCCC-CCHHHHHhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCC
Q 000316 240 VLGLLKTSGLITSVIPKTP-YTLENILQFS--------------PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 304 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~--------------~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP 304 (1678)
+++++..++.+++||||++ |+|.+++... ....+++..+..++.|++.||.|||++||+||||||
T Consensus 81 ~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp 160 (293)
T cd05053 81 LLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAA 160 (293)
T ss_pred EEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccce
Confidence 9999999999999999998 5999999631 235688899999999999999999999999999999
Q ss_pred CCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 305 SNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 305 ~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||++.++ .+||+|||+++........... ..-.++..|+|||.+.+..++.++|+|+.|+|.
T Consensus 161 ~Nil~~~~~--~~kL~Dfg~~~~~~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 224 (293)
T cd05053 161 RNVLVTEDH--VMKIADFGLARDIHHIDYYRKT---------TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLL 224 (293)
T ss_pred eeEEEcCCC--eEEeCccccccccccccceecc---------CCCCCCccccCHHHhccCCcCcccceeehhhHH
Confidence 999999999 8999999999864421110000 001135679999999988999999999999774
No 376
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.91 E-value=2.4e-23 Score=228.41 Aligned_cols=287 Identities=17% Similarity=0.220 Sum_probs=220.0
Q ss_pred eEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCC------------C------eEEEEEecCCccEEEEee
Q 000316 1320 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR------------I------NCVSGYYGHEEVVNDICV 1381 (1678)
Q Consensus 1320 l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~t------------g------~~l~~l~gH~~~V~sV~f 1381 (1678)
...+..|.+++++.+|++||.+++|||. |..|+|.|++. | -.++++..|.+.|+++.|
T Consensus 105 t~ylt~HK~~cR~aafs~DG~lvATGsa----D~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~F 180 (430)
T KOG0640|consen 105 TKYLTSHKSPCRAAAFSPDGSLVATGSA----DASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDF 180 (430)
T ss_pred eEEEeecccceeeeeeCCCCcEEEccCC----cceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceee
Confidence 4557789999999999999999999998 89999999851 1 246788899999999999
Q ss_pred cCCCCcEEeC--CCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEe
Q 000316 1382 LSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCL 1459 (1678)
Q Consensus 1382 s~~~~~laS~--DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v 1459 (1678)
+|....|+|+ |++|+++|...-...+.++.-. +...+.++
T Consensus 181 HPre~ILiS~srD~tvKlFDfsK~saKrA~K~~q--------------------------------------d~~~vrsi 222 (430)
T KOG0640|consen 181 HPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQ--------------------------------------DTEPVRSI 222 (430)
T ss_pred cchhheEEeccCCCeEEEEecccHHHHHHHHHhh--------------------------------------ccceeeeE
Confidence 9999988554 9999999987543322222100 01125566
Q ss_pred EeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEE
Q 000316 1460 HHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLF 1539 (1678)
Q Consensus 1460 a~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lW 1539 (1678)
.++|.|.++++|..-.++++||+++.++...-... -.|...|.+|.++ +.|++.++||.||.|++|
T Consensus 223 SfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd---~qht~ai~~V~Ys-----------~t~~lYvTaSkDG~Iklw 288 (430)
T KOG0640|consen 223 SFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPD---DQHTGAITQVRYS-----------STGSLYVTASKDGAIKLW 288 (430)
T ss_pred eecCCCceEEEecCCCceeEEeccceeEeeecCcc---cccccceeEEEec-----------CCccEEEEeccCCcEEee
Confidence 66677999999999999999999998875443321 1467778888775 456799999999999999
Q ss_pred eCCCCcEEEEEe-ccCCC-eEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecC--CCCEE----E-EEecCCE
Q 000316 1540 DVRSGNVIASWR-AHDGY-VTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGH--TNGIS----G-FSVWGQD 1609 (1678)
Q Consensus 1540 D~~tg~~i~~l~-gH~~~-V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH--~~~V~----a-fSpdg~~ 1609 (1678)
|--+++++.++. +|.+. |.+.. ..||++++|++.|.+|++|.+.++ +.+.++.|- ++.+. + |.....+
T Consensus 289 DGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~--R~l~~YtGAg~tgrq~~rtqAvFNhtEdy 366 (430)
T KOG0640|consen 289 DGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTG--RMLKEYTGAGTTGRQKHRTQAVFNHTEDY 366 (430)
T ss_pred ccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCC--ceEEEEecCCcccchhhhhhhhhcCccce
Confidence 999999999886 67654 55555 889999999999999999999999 455555543 22221 2 7777777
Q ss_pred EEEEeCCC--eEEEecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1610 VISISNNK--IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1610 LaSgs~D~--I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
++.-.... +.-||.... . ...++. .+|.+.+..+.-+|.+..|.|||+|-.+|+|
T Consensus 367 Vl~pDEas~slcsWdaRta-----d----r~~l~s----lgHn~a~R~i~HSP~~p~FmTcsdD~raRFW 423 (430)
T KOG0640|consen 367 VLFPDEASNSLCSWDARTA-----D----RVALLS----LGHNGAVRWIVHSPVEPAFMTCSDDFRARFW 423 (430)
T ss_pred EEccccccCceeeccccch-----h----hhhhcc----cCCCCCceEEEeCCCCCceeeecccceeeee
Confidence 77765433 788885321 1 012222 2599999999999999999999999999999
No 377
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.91 E-value=6.9e-24 Score=251.13 Aligned_cols=197 Identities=14% Similarity=0.110 Sum_probs=158.3
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|.+.+.||+|+||.||++.+.. .....++..+|+|.+... .......+. +|+.++++++||||+++
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~-~~~~~~~~~~~ik~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 72 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYN-LCPEQDKILVAVKTLKDA--SDNARKDFH--------REAELLTNLQHEHIVKF 72 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEecc-CCCCCcceEEEEEecCCc--CHHHHHHHH--------HHHHHHHhCCCCCcceE
Confidence 4579999999999999999998531 111235677999998653 223333444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSP-----------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVL 308 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~-----------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NIL 308 (1678)
++++...+.+++||||++ ++|.+++.... ...+++..+..++.|++.||+|||++||+||||||+|||
T Consensus 73 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nil 152 (288)
T cd05093 73 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCL 152 (288)
T ss_pred EEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEE
Confidence 999999999999999998 59999997421 234899999999999999999999999999999999999
Q ss_pred ecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 309 LTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 309 l~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+++++ .+||+|||+++........ .....+.++..|+|||++.+..++.++|+|+.|++.
T Consensus 153 i~~~~--~~kl~dfg~~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il 212 (288)
T cd05093 153 VGENL--LVKIGDFGMSRDVYSTDYY---------RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVL 212 (288)
T ss_pred EccCC--cEEeccCCccccccCCcee---------ecCCCCCccccccCHHHhccCCCCchhhHHHHHHHH
Confidence 99999 8999999999854321110 011123356789999999998999999999999665
No 378
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.91 E-value=6.7e-24 Score=253.21 Aligned_cols=199 Identities=16% Similarity=0.160 Sum_probs=157.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCC-CccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLS-GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 238 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~-~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV 238 (1678)
.++|++.+.||+|+||.||+|+..... .....+..+|+|.+... .......++. +|+.+++.+ +||||+
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~--------~E~~~l~~l~~h~~i~ 84 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLV--------SEMEMMKMIGKHKNII 84 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccc-cchHHHHHHH--------HHHHHHHhhccCCCch
Confidence 568999999999999999999853211 12235678999998643 2223333444 899999999 899999
Q ss_pred ceeeEEEeCCeEEEeccCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCC
Q 000316 239 PVLGLLKTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVC 303 (1678)
Q Consensus 239 ~l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLK 303 (1678)
++++++......|+||||++ |+|.+++.... ...++...+..++.||+.||.|||++||+|||||
T Consensus 85 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlk 164 (304)
T cd05101 85 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLA 164 (304)
T ss_pred heeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccc
Confidence 99999999999999999998 59999997421 2346778889999999999999999999999999
Q ss_pred CCCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 304 PSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 304 P~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|+|||++.++ .+||+|||+++......... . ...-.+++.|+|||++.+..|+.++|+|+.|.+.
T Consensus 165 p~Nili~~~~--~~kl~D~g~~~~~~~~~~~~---~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 229 (304)
T cd05101 165 ARNVLVTENN--VMKIADFGLARDVNNIDYYK---K------TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 229 (304)
T ss_pred cceEEEcCCC--cEEECCCccceecccccccc---c------ccCCCCCceeeCchhhccCCCCchhhHHHHHHHH
Confidence 9999999998 89999999998653211110 0 0011245679999999998999999999999654
No 379
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.91 E-value=1.1e-24 Score=264.62 Aligned_cols=231 Identities=14% Similarity=0.171 Sum_probs=193.0
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
..++.++||.|.||+|++|+-+... +....||||.++.+ ..+....+|+ .|..||.+++||||++|.|
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pg---kre~~VAIKTLK~G-ytekqrrdFL--------~EAsIMGQFdHPNIIrLEG 697 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPG---KREITVAIKTLKAG-YTEKQRRDFL--------SEASIMGQFDHPNIIRLEG 697 (996)
T ss_pred heEEEEEEecccccceecccccCCC---CcceeEEEeeeccC-ccHHHHhhhh--------hhhhhcccCCCCcEEEEEE
Confidence 4568999999999999999965422 45678999999875 5556667787 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
+......+.||.|||+ |.|+.+|+.+ .+.|+..+..-+++.|+.|+.||-+.|.|||||...|||++.+. .+|++|
T Consensus 698 VVTks~PvMIiTEyMENGsLDsFLR~~-DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnL--vCKVsD 774 (996)
T KOG0196|consen 698 VVTKSKPVMIITEYMENGSLDSFLRQN-DGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNL--VCKVSD 774 (996)
T ss_pred EEecCceeEEEhhhhhCCcHHHHHhhc-CCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccce--EEEecc
Confidence 9999999999999999 7999999964 46699999999999999999999999999999999999999999 999999
Q ss_pred cCCcccCCCCCcccccCCCCcceeeccccc--CcccccccccccccccccccccccCccchhhhHhhhccccCCCCCCCc
Q 000316 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSS--QGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYT 399 (1678)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~g--t~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs~~dl~ 399 (1678)
||++|........ .... .+| ...|.|||.+.-..+++++|+|+.|.+ +...-.+.-|+|.|++
T Consensus 775 FGLSRvledd~~~---~ytt-------~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIV-----mWEVmSyGERPYWdmS 839 (996)
T KOG0196|consen 775 FGLSRVLEDDPEA---AYTT-------LGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV-----MWEVMSYGERPYWDMS 839 (996)
T ss_pred ccceeecccCCCc---cccc-------cCCccceeecChhHhhhcccCchhhccccceE-----EEEecccCCCcccccc
Confidence 9999976543211 1111 112 356999999999999999999999955 2334457779999999
Q ss_pred CCcccceEe-cCCCCCCCCCCCcCc
Q 000316 400 FHMVMPWVI-DFSTKPDENFDSGSR 423 (1678)
Q Consensus 400 q~pv~pwv~-d~~~~~~~~~~~~~r 423 (1678)
+.-|+--|- +|..+++.++|...-
T Consensus 840 NQdVIkaIe~gyRLPpPmDCP~aL~ 864 (996)
T KOG0196|consen 840 NQDVIKAIEQGYRLPPPMDCPAALY 864 (996)
T ss_pred hHHHHHHHHhccCCCCCCCCcHHHH
Confidence 999999998 788888777776533
No 380
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.91 E-value=3.4e-24 Score=276.27 Aligned_cols=222 Identities=18% Similarity=0.161 Sum_probs=181.1
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
...-++.+.||+|.||+||+|.-.-..+... ...||||.+++. ...+...+|+ +|..+|+.++|||||++
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~-~~~vaiK~l~~~-~~~~~~~~Fl--------~Ea~~m~~f~HpNiv~l 760 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVS-PIQVAVKSLKRL-SSEQEVSDFL--------KEALLMSKFDHPNIVSL 760 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCcc-ceEEEEEecccc-CCHHHHHHHH--------HHHHHHhcCCCcceeeE
Confidence 3467889999999999999999654333322 556999999774 4556677787 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSP-----NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~-----~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
+|++.+....+|++|||+ |||..+|+..+ ...++..+...++.||++|+.||++++.|||||...|+||+...
T Consensus 761 iGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r- 839 (1025)
T KOG1095|consen 761 IGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERR- 839 (1025)
T ss_pred EEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccC-
Confidence 999999999999999999 59999999631 44588999999999999999999999999999999999999998
Q ss_pred eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCC
Q 000316 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1678)
Q Consensus 315 ~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs 394 (1678)
.+||+||||||..-...........+ =...|||||.+....++.++|+|++|.+ |..+-.+..-+
T Consensus 840 -~VKIaDFGlArDiy~~~yyr~~~~a~---------lPvkWm~PEsl~d~iFtskSDvWsFGVl-----lWEifslG~~P 904 (1025)
T KOG1095|consen 840 -VVKIADFGLARDIYDKDYYRKHGEAM---------LPVKWMPPESLKDGIFTSKSDVWSFGVL-----LWEIFSLGATP 904 (1025)
T ss_pred -cEEEcccchhHhhhhchheeccCccc---------cceecCCHHHHhhcccccccchhhhHHH-----HHHHHhCCCCC
Confidence 99999999999433222111111111 1346999999999999999999999966 55555677788
Q ss_pred CCCCcCCcccceEe
Q 000316 395 WGDYTFHMVMPWVI 408 (1678)
Q Consensus 395 ~~dl~q~pv~pwv~ 408 (1678)
|.+.++.-|+-.++
T Consensus 905 Y~~~~n~~v~~~~~ 918 (1025)
T KOG1095|consen 905 YPSRSNFEVLLDVL 918 (1025)
T ss_pred CCCcchHHHHHHHH
Confidence 99999988886444
No 381
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.91 E-value=9e-24 Score=250.65 Aligned_cols=199 Identities=18% Similarity=0.187 Sum_probs=158.9
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCC----------ccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSG----------CLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG 230 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~----------~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~ 230 (1678)
.++|++++.||+|+||.||+|.+....+ .......+|+|.+.... .......+. +|+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~--------~e~~~l~ 74 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA-SDNAREDFL--------KEVKILS 74 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc-CHHHHHHHH--------HHHHHHH
Confidence 4689999999999999999998653211 11245679999987642 223333444 8999999
Q ss_pred cCCCCcccceeeEEEeCCeEEEeccCCCC-CHHHHHhhCC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCceec
Q 000316 231 CLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSP---------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHR 300 (1678)
Q Consensus 231 ~l~HpNIV~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~---------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHR 300 (1678)
.++||||+++++++..++..++||||+++ +|.+++.... ...+++..++.++.|++.||.|||++||+||
T Consensus 75 ~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~ 154 (296)
T cd05051 75 RLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHR 154 (296)
T ss_pred hcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCcccc
Confidence 99999999999999999999999999985 9999997432 1268899999999999999999999999999
Q ss_pred CCCCCCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 301 SVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 301 DLKP~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
||||+||+++.++ .+||+|||+++......... ......+++.|+|||.+.+..++.++|+|+.|.+.
T Consensus 155 dlkp~Nili~~~~--~~~l~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l 222 (296)
T cd05051 155 DLATRNCLVGKNY--TIKIADFGMSRNLYSSDYYR---------VQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTL 222 (296)
T ss_pred ccchhceeecCCC--ceEEccccceeecccCccee---------ecCcCCCCceecCHHHhhcCCCCccchhhhhHHHH
Confidence 9999999999998 89999999998543211110 01112356789999999888899999999999654
No 382
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.91 E-value=5.5e-23 Score=221.31 Aligned_cols=278 Identities=18% Similarity=0.216 Sum_probs=210.8
Q ss_pred EEEEEecCC-CEEEEEecC---CCCCCeEEEEeCCCCeEEEEEe--cCCccEEEEeecCCCCcE---EeCCCcEEEEECC
Q 000316 1331 RSVAVGQDE-CTVFTAGIG---PGFKGTVQKWELTRINCVSGYY--GHEEVVNDICVLSSSGRI---ASCDGTLHVWNSQ 1401 (1678)
Q Consensus 1331 ~svafspdg-~~LaSgS~d---~~~DgtVrlWDl~tg~~l~~l~--gH~~~V~sV~fs~~~~~l---aS~DgtVrIWD~~ 1401 (1678)
.++.|||-- .+|+.+... -...|++.|-++..++-+..+. .-.+.+.+|+|+++...+ +++||++++||+.
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~ 91 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLT 91 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEeccC
Confidence 567888842 233333210 0125899999987555554443 357889999999875543 7779999999954
Q ss_pred C-CceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEE
Q 000316 1402 T-GKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFI 1480 (1678)
Q Consensus 1402 t-g~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlW 1480 (1678)
. ..++..+++ |..+|.++.++.. .+..++++|.|+|||+|
T Consensus 92 ~~s~Pi~~~kE------------------------------H~~EV~Svdwn~~---------~r~~~ltsSWD~TiKLW 132 (311)
T KOG0277|consen 92 MPSKPIHKFKE------------------------------HKREVYSVDWNTV---------RRRIFLTSSWDGTIKLW 132 (311)
T ss_pred CCCcchhHHHh------------------------------hhhheEEeccccc---------cceeEEeeccCCceEee
Confidence 2 234444444 4566777777764 46788899999999999
Q ss_pred ECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCC-CcEEEEEeccCCCeEE
Q 000316 1481 DINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRS-GNVIASWRAHDGYVTK 1559 (1678)
Q Consensus 1481 Dl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~t-g~~i~~l~gH~~~V~s 1559 (1678)
|...++.+.++.+|.. -|...+|+|. .+++++++|.||++++||++. |+.+. +..|...+.+
T Consensus 133 ~~~r~~Sv~Tf~gh~~------~Iy~a~~sp~----------~~nlfas~Sgd~~l~lwdvr~~gk~~~-i~ah~~Eil~ 195 (311)
T KOG0277|consen 133 DPNRPNSVQTFNGHNS------CIYQAAFSPH----------IPNLFASASGDGTLRLWDVRSPGKFMS-IEAHNSEILC 195 (311)
T ss_pred cCCCCcceEeecCCcc------EEEEEecCCC----------CCCeEEEccCCceEEEEEecCCCceeE-EEeccceeEe
Confidence 9999999999997543 4677777653 348999999999999999997 45554 9999999999
Q ss_pred EE--cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEE--EEecC-CEEEEEeCCC-eEEEecCCCCCCCCcc
Q 000316 1560 LA--APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWG-QDVISISNNK-IGLSSLSKSADEDGQH 1633 (1678)
Q Consensus 1560 va--spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg-~~LaSgs~D~-I~vwdl~~~~~~~g~~ 1633 (1678)
+. .-+..+|+||+.|+.|++||+++-+ .++.++.||.-.|+. |||.. ..|||+|.|. +++||..+. ++..
T Consensus 196 cdw~ky~~~vl~Tg~vd~~vr~wDir~~r-~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~---ds~~ 271 (311)
T KOG0277|consen 196 CDWSKYNHNVLATGGVDNLVRGWDIRNLR-TPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQ---DSAI 271 (311)
T ss_pred ecccccCCcEEEecCCCceEEEEehhhcc-ccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccc---hhhh
Confidence 98 4466799999999999999999865 678899999999994 88875 5789999999 999997622 1111
Q ss_pred eeccceeeeeecCCCccCcEEEEEEecC-CCEEEEEeCCCcEEEcC
Q 000316 1634 RLVPQKLYMVDNGAKNLSVLSSISILPF-SRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1634 ~~~~~kl~~~~~g~~h~~~I~svafsPd-~~lLatgs~DG~IrIwd 1678 (1678)
..+ ..|..-|..++|++. ..++|++++|+.+.||+
T Consensus 272 -----e~~-----~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~ 307 (311)
T KOG0277|consen 272 -----ETV-----DHHTEFVCGLDWSLFDPGQVASTGWDELLYVWN 307 (311)
T ss_pred -----hhh-----hccceEEeccccccccCceeeecccccceeeec
Confidence 111 147788999999984 57899999999999995
No 383
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.91 E-value=7.4e-24 Score=245.29 Aligned_cols=185 Identities=16% Similarity=0.110 Sum_probs=149.8
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeC
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~ 247 (1678)
+.||+|+||.||+|++. .++..+|+|.+... ........+. +|+++++.++||||+++++++...
T Consensus 1 ~~lg~g~~g~vy~~~~~------~~~~~~a~k~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~~~~~~ 65 (252)
T cd05084 1 ERIGRGNFGEVFSGRLR------ADNTPVAVKSCRET-LPPDLKAKFL--------QEARILKQYSHPNIVRLIGVCTQK 65 (252)
T ss_pred CccCcccCccEEEEEEe------cCCceEEEEecCcc-CCHHHHHHHH--------HHHHHHHhCCCCCcceEEEEEcCC
Confidence 46999999999999964 46788999987643 2222333444 899999999999999999999999
Q ss_pred CeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCcc
Q 000316 248 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1678)
Q Consensus 248 ~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~ 326 (1678)
...++||||+++ +|.+++.. ....+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||+|||+++
T Consensus 66 ~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~--~~kl~dfg~~~ 142 (252)
T cd05084 66 QPIYIVMELVQGGDFLTFLRT-EGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKN--VLKISDFGMSR 142 (252)
T ss_pred CCeEEEEeeccCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCC--cEEECccccCc
Confidence 999999999985 99999973 344588999999999999999999999999999999999999998 89999999987
Q ss_pred cCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 327 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
......... . ......+..|+|||.+.+..++.++|+|+.|.|.
T Consensus 143 ~~~~~~~~~---~------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 186 (252)
T cd05084 143 EEEDGVYAS---T------GGMKQIPVKWTAPEALNYGRYSSESDVWSFGILL 186 (252)
T ss_pred ccccccccc---c------CCCCCCceeecCchhhcCCCCChHHHHHHHHHHH
Confidence 533110000 0 0000124569999999988899999999999665
No 384
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.91 E-value=1.1e-23 Score=245.36 Aligned_cols=189 Identities=19% Similarity=0.160 Sum_probs=155.8
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.+. .+..||+|.++.... ...++. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-------~~~~v~iK~~~~~~~---~~~~~~--------~e~~~l~~l~h~~i~~~ 66 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWN-------NTTPVAVKTLKPGTM---DPKDFL--------AEAQIMKKLRHPKLIQL 66 (261)
T ss_pred hhheeeEEEecccCCccEEEEEec-------CCeEEEEEeeCCCcc---cHHHHH--------HHHHHHHHCCCCCccce
Confidence 357999999999999999999853 346799999875432 223444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++...+..|+||||++ ++|.+++.......++...+..++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~--~~~l 144 (261)
T cd05068 67 YAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENN--ICKV 144 (261)
T ss_pred eEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCC--CEEE
Confidence 999999999999999996 5999999854445689999999999999999999999999999999999999999 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++........ .. .....+..|+|||.+.+..++.++|+|+.|.+.
T Consensus 145 ~dfg~~~~~~~~~~~-----~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 194 (261)
T cd05068 145 ADFGLARVIKEDIYE-----AR-----EGAKFPIKWTAPEAALYNRFSIKSDVWSFGILL 194 (261)
T ss_pred CCcceEEEccCCccc-----cc-----CCCcCceeccCccccccCCCCchhhHHHHHHHH
Confidence 999999865421100 00 011124579999999998999999999999554
No 385
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.90 E-value=1.1e-23 Score=251.49 Aligned_cols=198 Identities=18% Similarity=0.139 Sum_probs=159.4
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
.++|++.+.||+|+||.||++.+.. ......+..+|+|.++.... ......+. +|+.+++.+ +||||++
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~-~~~~~~~~~vavK~~~~~~~-~~~~~~~~--------~E~~~l~~l~~h~~iv~ 103 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYG-LSKSDAVMKVAVKMLKPTAH-SSEREALM--------SELKIMSHLGNHENIVN 103 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEec-CCCCCceeEEEEEecCccCC-hHHHHHHH--------HHHHHHHhccCCCCcce
Confidence 4579999999999999999998531 11224567899999875422 22223343 899999999 7999999
Q ss_pred eeeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
+++++...+..|+||||++ |+|.++++......+++..+..++.|++.||.|||+++|+||||||+|||++.++ .+|
T Consensus 104 ~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~~ 181 (302)
T cd05055 104 LLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGK--IVK 181 (302)
T ss_pred EEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCC--eEE
Confidence 9999999999999999998 5999999854444589999999999999999999999999999999999999988 899
Q ss_pred EEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|+|||+++........ .......++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 182 l~dfg~~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil 233 (302)
T cd05055 182 ICDFGLARDIMNDSNY---------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILL 233 (302)
T ss_pred ECCCcccccccCCCce---------eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHH
Confidence 9999999854321110 011123356789999999988999999999999654
No 386
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.90 E-value=1.1e-23 Score=247.28 Aligned_cols=198 Identities=16% Similarity=0.096 Sum_probs=157.5
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.++... ....+..+|+|.+.... .......+. +|+.+|+.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~~~aik~~~~~~-~~~~~~~~~--------~e~~~l~~~~~~~i~~~ 74 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVV-KGEPETRVAIKTVNENA-SMRERIEFL--------NEASVMKEFNCHHVVRL 74 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccC-CCCcceeEEEEecCCcc-CHHHHHHHH--------HHHHHHHhCCCCceeEE
Confidence 468999999999999999999864211 12356789999986532 222333444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecC
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSP--------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~--------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~ 311 (1678)
++++......++||||++ |+|.+++.... ...+++..+..++.|++.||.|||++||+||||||+|||++.
T Consensus 75 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~ 154 (277)
T cd05032 75 LGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAE 154 (277)
T ss_pred EEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcC
Confidence 999999999999999998 59999997421 223677888999999999999999999999999999999999
Q ss_pred CCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 312 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 312 ~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
++ .+||+|||+++......... . .....++..|+|||.+.+..++.++|+|+.|++.
T Consensus 155 ~~--~~kl~dfg~~~~~~~~~~~~-~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 211 (277)
T cd05032 155 DL--TVKIGDFGMTRDIYETDYYR-K--------GGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVL 211 (277)
T ss_pred CC--CEEECCcccchhhccCcccc-c--------CCCCCccccccCHHHHhcCCCCcccchHHHHHHH
Confidence 99 89999999998543211100 0 0111246789999999888899999999999664
No 387
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.90 E-value=9.1e-24 Score=245.57 Aligned_cols=187 Identities=17% Similarity=0.161 Sum_probs=148.9
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeC
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~ 247 (1678)
++||+|+||.||+|..+ ...++..+|+|+++..........++. +|+.+++.++||||+++++++. .
T Consensus 1 ~~lg~G~~g~v~~~~~~----~~~~~~~~aiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~~~~-~ 67 (257)
T cd05116 1 GELGSGNFGTVKKGMYK----MKKSEKTVAVKILKNDNNDPALKDELL--------REANVMQQLDNPYIVRMIGICE-A 67 (257)
T ss_pred CcCCCcCCcceEEeEEe----cCCCceEEEEEEccCCCCcHHHHHHHH--------HHHHHHHhCCCCCcceEEEEEc-C
Confidence 36899999999999743 124578899999875433333334444 8999999999999999999875 4
Q ss_pred CeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCcc
Q 000316 248 GLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1678)
Q Consensus 248 ~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~ 326 (1678)
+..++||||++ |+|.+++. ....+++..+..++.|++.||+|||++||+||||||.|||++.++ .+||+|||+++
T Consensus 68 ~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~--~~kl~Dfg~~~ 143 (257)
T cd05116 68 ESWMLVMELAELGPLNKFLQ--KNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQH--YAKISDFGLSK 143 (257)
T ss_pred CCcEEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCC--eEEECCCcccc
Confidence 56789999999 59999997 345689999999999999999999999999999999999999998 89999999998
Q ss_pred cCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 327 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
.......... ......++..|+|||.+....++.+.|+|+.|++.
T Consensus 144 ~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 188 (257)
T cd05116 144 ALGADENYYK--------AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLM 188 (257)
T ss_pred ccCCCCCeee--------ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHH
Confidence 6432111100 00111245789999999888899999999999654
No 388
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.90 E-value=1.6e-23 Score=243.39 Aligned_cols=189 Identities=17% Similarity=0.184 Sum_probs=157.3
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.+. .++..+++|.+...... ....+. +|+.+++.++||||+++
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~--~~~~~~--------~e~~~l~~~~h~~i~~~ 65 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDI------ATGELVAIKVIKLEPGD--DFEIIQ--------QEISMLKECRHPNIVAY 65 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEec------CCCCEEEEEEEEcCchh--hHHHHH--------HHHHHHHhCCCCChhce
Confidence 468999999999999999999964 35678999998754222 223333 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+...+|++|||+++ +|.+++.. ....+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 66 ~~~~~~~~~~~l~~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~--~~~l 142 (262)
T cd06613 66 FGSYLRRDKLWIVMEYCGGGSLQDIYQV-TRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDG--DVKL 142 (262)
T ss_pred EEEEEeCCEEEEEEeCCCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCC--CEEE
Confidence 9999999999999999996 99998873 235689999999999999999999999999999999999999999 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccc---cccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM---DWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~---~y~~~~d~W~~G~is 379 (1678)
+|||++........ ......++..|+|||++.+. .++.++|+|+.|.+.
T Consensus 143 ~d~g~~~~~~~~~~-----------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l 194 (262)
T cd06613 143 ADFGVSAQLTATIA-----------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITA 194 (262)
T ss_pred Cccccchhhhhhhh-----------ccccccCCccccCchhhcccccCCcCchhhhHHHHHHH
Confidence 99999875432110 01122467889999998877 889999999999554
No 389
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.90 E-value=9.1e-24 Score=246.54 Aligned_cols=188 Identities=16% Similarity=0.145 Sum_probs=153.1
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.++||+|+||.||+|++. ....+|+|.+...... ..++. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-------~~~~valK~~~~~~~~---~~~~~--------~E~~~l~~l~~~~i~~~ 66 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWN-------GTTRVAIKTLKPGTMS---PEAFL--------QEAQVMKKLRHEKLVQL 66 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEec-------CCceEEEEecccCccC---HHHHH--------HHHHHHHhCCCCCcceE
Confidence 357999999999999999999853 2345999998753332 22344 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++. .+..++||||+++ +|.+++.......++...+..++.|++.||+|||++||+||||||+||++++++ .+||
T Consensus 67 ~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~--~~~L 143 (262)
T cd05071 67 YAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL--VCKV 143 (262)
T ss_pred EEEEC-CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCC--cEEe
Confidence 99875 4568999999995 999999854445678999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++......... .....++..|+|||...+..++..+|+|+.|++.
T Consensus 144 ~dfg~~~~~~~~~~~~----------~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l 193 (262)
T cd05071 144 ADFGLARLIEDNEYTA----------RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 193 (262)
T ss_pred ccCCceeecccccccc----------ccCCcccceecCHhHhccCCCCchhhHHHHHHHH
Confidence 9999997543211100 1112356679999999888999999999999654
No 390
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.90 E-value=4.7e-24 Score=251.52 Aligned_cols=198 Identities=15% Similarity=0.155 Sum_probs=156.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++.++||+|+||.||+|.+.. ......+..+|+|.+.... .......+. +|+.+++.++||||+++
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~~~~~~~vaiK~~~~~~-~~~~~~~~~--------~e~~~~~~l~h~~iv~~ 73 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFG-TAPGEQTQAVAIKTLKDKA-EGPLREEFK--------HEAMMRSRLQHPNIVCL 73 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEec-CCCCCceeEEEEEEccCCC-CHHHHHHHH--------HHHHHHhcCCCCCcCeE
Confidence 3468889999999999999998542 1112356789999987532 222222333 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCC
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFS--------------PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPS 305 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~--------------~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~ 305 (1678)
++++.+.+..++++||+++ +|.+++... ....++...+..++.|++.||.|||++||+||||||+
T Consensus 74 ~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~ 153 (283)
T cd05091 74 LGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATR 153 (283)
T ss_pred EEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchh
Confidence 9999999999999999984 999998521 1234788889999999999999999999999999999
Q ss_pred CeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 306 NVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 306 NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||+++++ .+||+|||+++......... ......+++.|+|||.+.+..++.++|+|+.|++.
T Consensus 154 Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l 216 (283)
T cd05091 154 NVLVFDKL--NVKISDLGLFREVYAADYYK---------LMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVL 216 (283)
T ss_pred heEecCCC--ceEecccccccccccchhee---------eccCccCCccccCHHHHhcCCCCcchhHHHHHHHH
Confidence 99999988 89999999998643211110 01112356789999999888899999999999654
No 391
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.90 E-value=1.1e-23 Score=251.87 Aligned_cols=199 Identities=16% Similarity=0.135 Sum_probs=156.8
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCC-CccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLS-GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 238 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~-~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV 238 (1678)
.++|.+.+.||+|+||.||+|++.-.. .....+..+|+|.+.... ......++. +|+.+++.+ +||||+
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~--------~e~~~l~~l~~h~~i~ 87 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-TEKDLSDLI--------SEMEMMKMIGKHKNII 87 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC-ChHHHHHHH--------HHHHHHHHhcCCCCEe
Confidence 368999999999999999999853211 112345679999987542 223333444 899999999 799999
Q ss_pred ceeeEEEeCCeEEEeccCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCC
Q 000316 239 PVLGLLKTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVC 303 (1678)
Q Consensus 239 ~l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLK 303 (1678)
++++++...+..|+||||++ |+|.+++.... ...++...+..++.|++.||+|||++||+|||||
T Consensus 88 ~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlk 167 (307)
T cd05098 88 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLA 167 (307)
T ss_pred eEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCccccccc
Confidence 99999999999999999999 59999997532 1347888899999999999999999999999999
Q ss_pred CCCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 304 PSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 304 P~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|+|||++.++ .+||+|||+++......... . .....+++.|+|||.+.+..++.++|+|+.|++.
T Consensus 168 p~Nill~~~~--~~kL~dfg~a~~~~~~~~~~----~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l 232 (307)
T cd05098 168 ARNVLVTEDN--VMKIADFGLARDIHHIDYYK----K-----TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 232 (307)
T ss_pred HHheEEcCCC--cEEECCCcccccccccchhh----c-----cccCCCccceeChHHhccCCCCcHHHHHHHHHHH
Confidence 9999999998 89999999997543211000 0 0011134679999999988899999999999554
No 392
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.90 E-value=1.4e-23 Score=247.78 Aligned_cols=195 Identities=15% Similarity=0.074 Sum_probs=155.9
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
-|++++.||+|+||.||+|+... ....++..||+|.++... .......+. +|+.+++.++||||+++++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~--~~~~~~~~va~K~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~ 73 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDP--EGDNTGEQVAVKSLKPES-GGNHIADLK--------KEIEILRNLYHENIVKYKG 73 (284)
T ss_pred hhhhceecCCCCceeEEEEEEcc--CCCCccceEEEEEcCccc-cHHHHHHHH--------HHHHHHHhCCCCCeeeeee
Confidence 47899999999999999998431 122467889999986532 222223333 8999999999999999999
Q ss_pred EEEeC--CeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 243 LLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 243 ~~~~~--~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++... ...++||||++| +|.+++... ...++...+..++.|++.||+|||++||+||||||+||+++.++ .+||
T Consensus 74 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~--~~~l 150 (284)
T cd05079 74 ICTEDGGNGIKLIMEFLPSGSLKEYLPRN-KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEH--QVKI 150 (284)
T ss_pred EEecCCCCceEEEEEccCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCC--CEEE
Confidence 98875 578999999985 999999732 33578999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++......... .......++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 151 ~dfg~~~~~~~~~~~~--------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il 202 (284)
T cd05079 151 GDFGLTKAIETDKEYY--------TVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTL 202 (284)
T ss_pred CCCccccccccCccce--------eecCCCCCCccccCHHHhccCCCCccccchhhhhhh
Confidence 9999998643211110 011123467789999999888899999999999664
No 393
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.90 E-value=1e-23 Score=251.76 Aligned_cols=190 Identities=18% Similarity=0.190 Sum_probs=152.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccc--eEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDC--VLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNV 237 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~--~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNI 237 (1678)
.++|++.+.||+|+||.||+|.++ .++ ..+|+|.+... ........+. +|+.++.++ +||||
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~------~~~~~~~~~ik~~~~~-~~~~~~~~~~--------~Ei~~l~~l~~h~~i 70 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIK------KDGLRMDAAIKRMKEY-ASKDDHRDFA--------GELEVLCKLGHHPNI 70 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEc------cCCceeeEEEEEeccc-CCHHHHHHHH--------HHHHHHHHhcCCCCc
Confidence 568999999999999999999964 233 34677776542 2222233343 899999999 89999
Q ss_pred cceeeEEEeCCeEEEeccCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCC
Q 000316 238 APVLGLLKTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSV 302 (1678)
Q Consensus 238 V~l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDL 302 (1678)
+++++++.+++.+|+||||++ ++|.++++... ...+++..++.++.||+.||+|||++||+||||
T Consensus 71 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl 150 (303)
T cd05088 71 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDL 150 (303)
T ss_pred ceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCcccccc
Confidence 999999999999999999998 59999997422 235789999999999999999999999999999
Q ss_pred CCCCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 303 CPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 303 KP~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
||+|||++.++ .+||+|||+++...... .. .....+..|+|||.+.+..++.+.|+|+.|.+.
T Consensus 151 kp~Nili~~~~--~~kl~dfg~~~~~~~~~------~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 213 (303)
T cd05088 151 AARNILVGENY--VAKIADFGLSRGQEVYV------KK------TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 213 (303)
T ss_pred chheEEecCCC--cEEeCccccCcccchhh------hc------ccCCCcccccCHHHHhccCCcccccchhhhhHH
Confidence 99999999998 89999999987322100 00 001135579999999888899999999999665
No 394
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.90 E-value=1.7e-23 Score=243.83 Aligned_cols=191 Identities=20% Similarity=0.180 Sum_probs=158.4
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH-HHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
++|++.+.||+|+||.||+|.+. .++..+|+|.++........ ...+. +|+++++.++|+||+++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~--------~ei~~l~~~~~~~i~~~ 67 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICL------LDGRVVALKKVQIFEMMDAKARQDCL--------KEIDLLKQLDHPNVIKY 67 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEc------CCCCEEEEEEeecccccchhhHHHHH--------HHHHHHHhCCCCCeeee
Confidence 57999999999999999999964 46789999998753333322 33333 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++++..++..++||||+++ +|.+++... ....+++..++.++.|++.||.|||++||+||||||+||+++.++ .+
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~--~~ 145 (267)
T cd08224 68 LASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATG--VV 145 (267)
T ss_pred eeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCC--cE
Confidence 9999999999999999995 999998742 235588999999999999999999999999999999999999999 89
Q ss_pred EEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
||+|||+++........ .....+++.|+|||.+.+..++.++|+|+.|.+.
T Consensus 146 ~l~d~~~~~~~~~~~~~-----------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il 196 (267)
T cd08224 146 KLGDLGLGRFFSSKTTA-----------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL 196 (267)
T ss_pred EEeccceeeeccCCCcc-----------cceecCCccccCHHHhccCCCCchhcHHHHHHHH
Confidence 99999998754321100 0112367789999999998999999999999554
No 395
>PTZ00421 coronin; Provisional
Probab=99.90 E-value=1e-21 Score=246.12 Aligned_cols=226 Identities=19% Similarity=0.225 Sum_probs=170.9
Q ss_pred EEEEeCCCCEEEEeCCCce-e-------------EEeccccccEEEEEEec-CCCEEEEEecCCCCCCeEEEEeCCCC--
Q 000316 1301 LGRVGGLKDESPWKIKASI-L-------------SSIRAHHGALRSVAVGQ-DECTVFTAGIGPGFKGTVQKWELTRI-- 1363 (1678)
Q Consensus 1301 LasgS~D~~v~lWd~~~~~-l-------------~tl~gH~~~V~svafsp-dg~~LaSgS~d~~~DgtVrlWDl~tg-- 1363 (1678)
+++++.+.....|+..|.. + ..+.||.+.|++++|+| ++++|+|||. |++|++||+.++
T Consensus 35 ~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~----DgtIkIWdi~~~~~ 110 (493)
T PTZ00421 35 TIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASE----DGTIMGWGIPEEGL 110 (493)
T ss_pred cEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeC----CCEEEEEecCCCcc
Confidence 6677777777777755321 1 24789999999999999 8899999997 999999999765
Q ss_pred -----eEEEEEecCCccEEEEeecCCC-CcE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCcccccccccc
Q 000316 1364 -----NCVSGYYGHEEVVNDICVLSSS-GRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVG 1435 (1678)
Q Consensus 1364 -----~~l~~l~gH~~~V~sV~fs~~~-~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~ 1435 (1678)
+++..+.+|...|.+|+|+|++ ..+ ++.|++|+|||+++++.+..+..|.
T Consensus 111 ~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~---------------------- 168 (493)
T PTZ00421 111 TQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHS---------------------- 168 (493)
T ss_pred ccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCC----------------------
Confidence 3567889999999999999976 455 4559999999999998877665432
Q ss_pred ccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCcc
Q 000316 1436 MLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKM 1515 (1678)
Q Consensus 1436 ~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~ 1515 (1678)
..+.+++|+++|..+++|+.|++|++||+++++.+.++.+|.+.. +..+.|.
T Consensus 169 ------------------~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~-----~~~~~w~----- 220 (493)
T PTZ00421 169 ------------------DQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAK-----SQRCLWA----- 220 (493)
T ss_pred ------------------CceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCc-----ceEEEEc-----
Confidence 225677777889999999999999999999999998888765321 2233333
Q ss_pred ccCcccCCCCEEEE-E---ecCCeEEEEeCCCCc-EEEEEeccCC-CeEEEE-cCCCCEEEEEe-CCCcEEEEEcCCCC
Q 000316 1516 QAGGAVASPSWIAA-G---LSSGQCRLFDVRSGN-VIASWRAHDG-YVTKLA-APEDHLLVSSS-LDKTLRIWDLRRNW 1586 (1678)
Q Consensus 1516 s~dg~~p~g~~Las-G---s~Dg~I~lWD~~tg~-~i~~l~gH~~-~V~sva-spdg~~LaSgS-~DgtI~IWDl~~~~ 1586 (1678)
+++..+++ | +.|+.|++||+++.. ++.....+.. .+.... ++++++|++|+ .|++|++||+.++.
T Consensus 221 ------~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~ 293 (493)
T PTZ00421 221 ------KRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNER 293 (493)
T ss_pred ------CCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCc
Confidence 22344554 4 347999999999764 4444443433 343444 78999888887 59999999999873
No 396
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.90 E-value=2.6e-24 Score=253.98 Aligned_cols=209 Identities=17% Similarity=0.169 Sum_probs=163.9
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
...+.++||+|.||+|.+|+- .....||+|.++.. ......++|. +||++|.+|+|||||+|++
T Consensus 539 ~L~~~ekiGeGqFGEVhLCev-------eg~lkVAVK~Lr~~-a~~~~r~~F~--------kEIkiLsqLkhPNIveLvG 602 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEV-------EGPLKVAVKILRPD-ATKNARNDFL--------KEIKILSRLKHPNIVELLG 602 (807)
T ss_pred heehhhhhcCcccceeEEEEe-------cCceEEEEeecCcc-cchhHHHHHH--------HHHHHHhccCCCCeeEEEe
Confidence 678899999999999999993 23689999999875 3444456777 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++..++.+++|||||+ |||.+++..+............++.||+.|++||.+.++|||||.+.|+|++.++ ++||||
T Consensus 603 VC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~--~iKiad 680 (807)
T KOG1094|consen 603 VCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEF--TIKIAD 680 (807)
T ss_pred eeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcc--cEEecC
Confidence 9999999999999999 7999999865333334445566999999999999999999999999999999999 999999
Q ss_pred cCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCCCCCCcCC
Q 000316 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFH 401 (1678)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs~~dl~q~ 401 (1678)
||++|..-.......++. .+-...|||+|-+.-.+++.++|.|..|.- -+|.++. ..-++|.+++.-
T Consensus 681 fgmsR~lysg~yy~vqgr---------~vlpiRwmawEsillgkFttaSDvWafgvT-lwE~~~~---C~e~Py~~lt~e 747 (807)
T KOG1094|consen 681 FGMSRNLYSGDYYRVQGR---------AVLPIRWMAWESILLGKFTTASDVWAFGVT-LWEVFML---CREQPYSQLTDE 747 (807)
T ss_pred cccccccccCCceeeecc---------eeeeeeehhHHHHHhccccchhhhhhhHHH-HHHHHHH---HhhCchhhhhHH
Confidence 999995432222111111 123457999998888899999999999933 2443332 233455554443
Q ss_pred c
Q 000316 402 M 402 (1678)
Q Consensus 402 p 402 (1678)
.
T Consensus 748 ~ 748 (807)
T KOG1094|consen 748 Q 748 (807)
T ss_pred H
Confidence 3
No 397
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.90 E-value=1e-23 Score=256.35 Aligned_cols=198 Identities=17% Similarity=0.144 Sum_probs=154.4
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
.++|++.+.||+|+||.||+|.+.- .....+++.||||.++... .......+. +|+.+|..+ +||||++
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~-~~~~~~~~~vavK~~~~~~-~~~~~~~~~--------~E~~~l~~l~~h~niv~ 75 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFG-IDKTATCRTVAVKMLKEGA-THSEHRALM--------SELKILIHIGHHLNVVN 75 (343)
T ss_pred hhHhcccccccCCccceEEEEeecc-CCccccceeEEEEEeccCC-ChHHHHHHH--------HHHHHHHhccCCccHhh
Confidence 4689999999999999999998531 1223567899999997542 222233343 899999999 6899999
Q ss_pred eeeEEEeC-CeEEEeccCCC-CCHHHHHhhCC------------------------------------------------
Q 000316 240 VLGLLKTS-GLITSVIPKTP-YTLENILQFSP------------------------------------------------ 269 (1678)
Q Consensus 240 l~~~~~~~-~~~~lVmEy~~-g~L~~~l~~~~------------------------------------------------ 269 (1678)
+++++... ..+++|||||+ |+|.+++....
T Consensus 76 ~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (343)
T cd05103 76 LLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEE 155 (343)
T ss_pred hcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCC
Confidence 99988654 46899999999 59999987421
Q ss_pred -----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCcccCCCCC
Q 000316 270 -----------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 332 (1678)
Q Consensus 270 -----------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~~~~~~ 332 (1678)
...++...+..++.||+.||+|||++||+||||||+|||++.++ .+||+|||+++......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~--~~kl~dfg~~~~~~~~~ 233 (343)
T cd05103 156 KSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENN--VVKICDFGLARDIYKDP 233 (343)
T ss_pred CccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCC--cEEEEecccccccccCc
Confidence 12356777888999999999999999999999999999999988 89999999998543211
Q ss_pred cccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 333 WCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
... ......++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 234 ~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 271 (343)
T cd05103 234 DYV---------RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 271 (343)
T ss_pred chh---------hcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHH
Confidence 100 01112356679999999988999999999999654
No 398
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.90 E-value=7.3e-24 Score=247.39 Aligned_cols=191 Identities=19% Similarity=0.155 Sum_probs=157.8
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH-HHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
++|++.+.||+|+||.||+|++. .++..+|||.+........ ...++. +|+.+++.++||||+++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~------~~~~~~~vK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~~ 67 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCL------LDGVPVALKKVQIFDLMDAKARADCI--------KEIDLLKQLNHPNVIKY 67 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeec------CCCceEEEEeeeehhhhhHHHHHHHH--------HHHHHHHHccCCchhhh
Confidence 57899999999999999999964 4678999998865332222 223344 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++++..++..++||||++| +|.+++... ....+++..+..++.||+.||.|||++||+||||||+||+++.++ .+
T Consensus 68 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~--~~ 145 (267)
T cd08229 68 YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATG--VV 145 (267)
T ss_pred hheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--CE
Confidence 9999999999999999995 999988732 245689999999999999999999999999999999999999998 89
Q ss_pred EEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
||+|||+++........ .....++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 146 ~l~dfg~~~~~~~~~~~-----------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il 196 (267)
T cd08229 146 KLGDLGLGRFFSSKTTA-----------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL 196 (267)
T ss_pred EECcchhhhccccCCcc-----------cccccCCcCccCHHHhcCCCccchhhHHHHHHHH
Confidence 99999998754321100 0112367889999999988899999999999554
No 399
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.90 E-value=1.1e-23 Score=239.75 Aligned_cols=270 Identities=17% Similarity=0.238 Sum_probs=214.5
Q ss_pred CCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCCCc---eeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeE
Q 000316 1281 KCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTV 1355 (1678)
Q Consensus 1281 gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~~~---~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtV 1355 (1678)
-|.+.|.. |-++... |+||+.|..|++|+..+. .+.+|.|..++|++++|.++++.++++|. |+.+
T Consensus 173 ~h~gev~~v~~l~~sdt-----latgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~----d~~~ 243 (459)
T KOG0288|consen 173 AHEGEVHDVEFLRNSDT-----LATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASN----DKNL 243 (459)
T ss_pred ccccccceeEEccCcch-----hhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecC----CCce
Confidence 35555554 5555443 999999999999998843 68899999999999999999999999996 9999
Q ss_pred EEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCcccccccc
Q 000316 1356 QKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQ 1433 (1678)
Q Consensus 1356 rlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~ 1433 (1678)
++|++...+...++.||++.|+++.|.-....+ +|.|.|||+||+..+.|.+++-..+..
T Consensus 244 r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~c------------------ 305 (459)
T KOG0288|consen 244 RLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQC------------------ 305 (459)
T ss_pred eeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheeccccccccc------------------
Confidence 999999999999999999999999997666656 556999999999998887655432111
Q ss_pred ccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCC
Q 000316 1434 VGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSE 1513 (1678)
Q Consensus 1434 ~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~ 1513 (1678)
.. +.. ....+++|-.|++||+||++++.++.....+ +.|+++..+
T Consensus 306 -------------nD----------I~~--~~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~g-------g~vtSl~ls--- 350 (459)
T KOG0288|consen 306 -------------ND----------IVC--SISDVISGHFDKKVRFWDIRSADKTRSVPLG-------GRVTSLDLS--- 350 (459)
T ss_pred -------------cc----------eEe--cceeeeecccccceEEEeccCCceeeEeecC-------cceeeEeec---
Confidence 00 111 1346788999999999999999988877643 347777654
Q ss_pred ccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccC----CCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCC
Q 000316 1514 KMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHD----GYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPS 1588 (1678)
Q Consensus 1514 ~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~----~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~ 1588 (1678)
.+|.-|.+++.|.++.+.|+++.+....+.+-. ..++.+. +|++.|+++||.||.|+||++.+++
T Consensus 351 --------~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgK-- 420 (459)
T KOG0288|consen 351 --------MDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGK-- 420 (459)
T ss_pred --------cCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCce--
Confidence 455788888999999999999998888876321 2256666 9999999999999999999999994
Q ss_pred CCeEeecCCC--CEEE--EEecCCEEEEEeCCC-eEEEe
Q 000316 1589 QPTVFKGHTN--GISG--FSVWGQDVISISNNK-IGLSS 1622 (1678)
Q Consensus 1589 ~~~~l~gH~~--~V~a--fSpdg~~LaSgs~D~-I~vwd 1622 (1678)
....++..+. .|++ |+|.|..+++++.++ +.+|.
T Consensus 421 lE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 421 LEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred EEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 3444444333 5875 888899999999999 99984
No 400
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.90 E-value=1.2e-23 Score=244.60 Aligned_cols=188 Identities=17% Similarity=0.170 Sum_probs=154.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||+|+||.||++... .+..+|+|.+...... ..++. +|+.+++.++||||+++
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~-------~~~~~aik~~~~~~~~---~~~~~--------~e~~~l~~l~h~~i~~~ 64 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWR-------GQYDVAIKMIKEGSMS---EDEFI--------EEAKVMMKLSHEKLVQL 64 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEec-------CCCcEEEEEcCCCccc---HHHHH--------HHHHHHhcCCCCCeeeE
Confidence 357999999999999999999742 3446999998654322 23344 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++...+.+++||||++ |+|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||
T Consensus 65 ~~~~~~~~~~~lv~e~~~~~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~--~~kl 141 (256)
T cd05113 65 YGVCTKQRPIYIVTEYMSNGCLLNYLREH-GKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQG--CVKV 141 (256)
T ss_pred EEEEccCCCcEEEEEcCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCC--CEEE
Confidence 999999999999999998 5999999743 33689999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++......... .....++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 142 ~d~g~~~~~~~~~~~~----------~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l 191 (256)
T cd05113 142 SDFGLSRYVLDDEYTS----------SVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLM 191 (256)
T ss_pred CCCccceecCCCceee----------cCCCccChhhCCHHHHhcCcccchhHHHHHHHHH
Confidence 9999998543211100 0112245679999999888899999999999553
No 401
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.90 E-value=1.4e-23 Score=246.95 Aligned_cols=194 Identities=19% Similarity=0.192 Sum_probs=152.6
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|+++++||+|+||+||+|++.- .+. .....||+|.+... .......++. +|+.+++.++||||+++
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~-~~~-~~~~~va~K~~~~~-~~~~~~~~~~--------~e~~~l~~~~~~~i~~~ 74 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIP-DGE-NVKIPVAIKVLREN-TSPKANKEIL--------DEAYVMAGVGSPYVCRL 74 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEec-CCC-ccceEEEEEEecCC-CCHHHHHHHH--------HHHHHHHhcCCCCCceE
Confidence 4679999999999999999998541 111 11335899998653 2223333444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.. ...+++|||++ |+|.+++.. ....+++..+..++.|++.||+|||++||+||||||+|||+++++ .+||
T Consensus 75 ~~~~~~-~~~~l~~~~~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~--~~kL 150 (279)
T cd05109 75 LGICLT-STVQLVTQLMPYGCLLDYVRE-NKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPN--HVKI 150 (279)
T ss_pred EEEEcC-CCcEEEEEcCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCC--cEEE
Confidence 999875 45789999998 599999973 345689999999999999999999999999999999999999988 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCcc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~i 378 (1678)
+|||+++......... ......++..|+|||...+..++.++|+|+.|++
T Consensus 151 ~dfG~~~~~~~~~~~~---------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~ 200 (279)
T cd05109 151 TDFGLARLLDIDETEY---------HADGGKVPIKWMALESILHRRFTHQSDVWSYGVT 200 (279)
T ss_pred CCCCceeeccccccee---------ecCCCccchhhCCHHHhccCCCCchhHHHHHHHH
Confidence 9999998654211100 0011124567999999998899999999999955
No 402
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.90 E-value=1.1e-23 Score=244.77 Aligned_cols=187 Identities=19% Similarity=0.218 Sum_probs=153.3
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
.+|++.+.||+|+||.||+++++ .+..+|+|.+.+.... ..++. +|+.+++.++||||++++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-------~~~~~~iK~~~~~~~~---~~~~~--------~e~~~l~~l~~~~i~~~~ 65 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-------GKIDVAIKMIREGAMS---EDDFI--------EEAKVMMKLSHPNLVQLY 65 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-------CCccEEEEEeccCCCC---HHHHH--------HHHHHHHhCCCCCEEEEE
Confidence 46889999999999999999853 3467899998653322 22344 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++...+..|+||||++| +|.+++... ...+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~--~~kl~ 142 (256)
T cd05059 66 GVCTKQRPIFIVTEYMANGCLLNYLRER-KGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDN--VVKVS 142 (256)
T ss_pred EEEcCCCceEEEEecCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCC--cEEEC
Confidence 999999999999999985 999999743 34688999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||+++......... .....++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 143 dfg~~~~~~~~~~~~----------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il 191 (256)
T cd05059 143 DFGLARYVLDDQYTS----------SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLM 191 (256)
T ss_pred Ccccceecccccccc----------cCCCCCCccccCHHHhccCCCCchhhHHHHHHHH
Confidence 999998543211000 0011234579999999999999999999999554
No 403
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=1.4e-24 Score=247.70 Aligned_cols=204 Identities=16% Similarity=0.180 Sum_probs=162.6
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
-++|-++..||+|+|++||+|-+- ...+.||+|+-..++....+.++... ..+.||..|.+.|.||-||++
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl------~EqRYvAvKIHqlNK~WrdEKKeNYh---KHAcREyrIHKeLDHpRIVKl 532 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDL------TEQRYVAVKIHQLNKNWRDEKKENYH---KHACREYRIHKELDHPRIVKL 532 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhccc------chhheeeEeeehhccchhhHhhhhHH---HHHHHHHhhhhccCcceeeee
Confidence 458999999999999999999853 67889999997766555444333221 246699999999999999999
Q ss_pred eeEEE-eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC--CceecCCCCCCeEecCCC-ce
Q 000316 241 LGLLK-TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSL--GIAHRSVCPSNVLLTDSC-WS 315 (1678)
Q Consensus 241 ~~~~~-~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~--gIiHRDLKP~NILl~~~g-~~ 315 (1678)
|++|. +.+.+|-|+|||+| ||.-+++ ..+.+++.+++.|+.||+.||.||.+. .|||-||||.|||+.+.. ++
T Consensus 533 YDyfslDtdsFCTVLEYceGNDLDFYLK--QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacG 610 (775)
T KOG1151|consen 533 YDYFSLDTDSFCTVLEYCEGNDLDFYLK--QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACG 610 (775)
T ss_pred eeeeeeccccceeeeeecCCCchhHHHH--hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccc
Confidence 99997 45589999999998 8988888 577899999999999999999999985 699999999999986542 25
Q ss_pred eEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc-c---ccccccccccccCccc
Q 000316 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-S---MDWHSQFNRWWRGELS 379 (1678)
Q Consensus 316 ~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~---~~y~~~~d~W~~G~is 379 (1678)
.+||+|||+++.+.........+.. ..+...||.+|.+||.+. + ...+.++|+|+.|.|.
T Consensus 611 eIKITDFGLSKIMdddSy~~vdGme----LTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIF 674 (775)
T KOG1151|consen 611 EIKITDFGLSKIMDDDSYNSVDGME----LTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIF 674 (775)
T ss_pred eeEeeecchhhhccCCccCccccee----eecccCceeeecCcceeecCCCCCccccceeeEeeehhh
Confidence 8999999999987654433222221 233456899999999654 2 2357799999999775
No 404
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.90 E-value=1.2e-23 Score=246.03 Aligned_cols=188 Identities=20% Similarity=0.135 Sum_probs=145.2
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeC
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~ 247 (1678)
+.||+|+||.||+|... .+ .....+|+|.+... ........++ +|+.+++.++||||+++++.+.+.
T Consensus 1 ~~lg~G~fg~v~~~~~~--~~--~~~~~~~~k~~~~~-~~~~~~~~~~--------~e~~~~~~l~h~nii~~~~~~~~~ 67 (269)
T cd05042 1 DEIGNGWFGKVLLGEAH--RG--MSKARVVVKELRAS-ATPDEQLLFL--------QEVQPYRELNHPNVLQCLGQCIES 67 (269)
T ss_pred CcCCccCCceEEEEEEe--cC--CCCeEEEEeecCcc-CChHHHHHHH--------HHHHHHHhCCCCCcceEEEEECCC
Confidence 46999999999999742 11 35567899987643 2233334444 899999999999999999999999
Q ss_pred CeEEEeccCCC-CCHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecC
Q 000316 248 GLITSVIPKTP-YTLENILQFSPN---ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1678)
Q Consensus 248 ~~~~lVmEy~~-g~L~~~l~~~~~---~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFG 323 (1678)
...|+||||++ |+|.+++..... ...++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||
T Consensus 68 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~--~~kl~dfg 145 (269)
T cd05042 68 IPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADL--SVKIGDYG 145 (269)
T ss_pred CceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCC--cEEEeccc
Confidence 99999999999 599999975322 2346777889999999999999999999999999999999999 89999999
Q ss_pred CcccCCCCCcccccCCCCcceeecccccCcccccccccc-------cccccccccccccCccc
Q 000316 324 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-------SMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 324 lA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-------~~~y~~~~d~W~~G~is 379 (1678)
+++.......... .....++..|+|||++. ...++.++|+|+.|++.
T Consensus 146 ~~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l 199 (269)
T cd05042 146 LALEQYPEDYYIT---------KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTM 199 (269)
T ss_pred cccccccchheec---------cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHH
Confidence 9875321110000 01112456799999864 34567899999999554
No 405
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.90 E-value=2.9e-24 Score=267.93 Aligned_cols=197 Identities=16% Similarity=0.144 Sum_probs=160.9
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+.+..+.||+|+||+||+|+.. ...-.++...||||.++.. ...+...+|. ||+++|..++|||||+|
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~-~l~p~~~~~lVAVK~LKd~-a~~~~~~dF~--------REaeLla~l~H~nIVrL 554 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAY-GLLPGQDEQLVAVKALKDK-AENQARQDFR--------REAELLAELQHPNIVRL 554 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhcc-CCCCCccceehhHhhhccc-ccHHHHHHHH--------HHHHHHHhccCCCeEEE
Confidence 346778999999999999999842 1112246778999999764 4444566776 99999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCe
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSP------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 307 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NI 307 (1678)
+|++..++.+|||+|||. |||.++|+... ...++..+...|+.||+.|++||-++..|||||-..|+
T Consensus 555 lGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNC 634 (774)
T KOG1026|consen 555 LGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNC 634 (774)
T ss_pred EEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhc
Confidence 999999999999999999 89999998421 22378889999999999999999999999999999999
Q ss_pred EecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCcc
Q 000316 308 LLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1678)
Q Consensus 308 Ll~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~i 378 (1678)
||.++. .|||+||||+|..-..+........ .=...||+||-+...+|+..+|+|+.|.+
T Consensus 635 LVge~l--~VKIsDfGLsRdiYssDYYk~~~~t---------~lPIRWMppEsIly~kFTteSDVWs~GVv 694 (774)
T KOG1026|consen 635 LVGENL--VVKISDFGLSRDIYSSDYYKVRGNT---------LLPIRWMPPESILYGKFTTESDVWSFGVV 694 (774)
T ss_pred eeccce--EEEecccccchhhhhhhhhcccCCc---------eeeeecCCHHHhhcCcccchhhhhhhhhh
Confidence 999999 9999999999964322211111011 12456999999999999999999999966
No 406
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.90 E-value=2.1e-23 Score=246.16 Aligned_cols=196 Identities=16% Similarity=0.113 Sum_probs=154.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++++.||+|+||.||+|.... -...++..||+|.+... .......+. +|+++|+.++||||+++
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~--~~~~~~~~v~iK~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~iv~~ 70 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDP--LQDNTGEVVAVKKLQHS--TAEHLRDFE--------REIEILKSLQHDNIVKY 70 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecC--CcCCCCcEEEEEEeccC--CHHHHHHHH--------HHHHHHHhCCCCCeeEE
Confidence 3479999999999999999997421 11246789999998653 222233444 89999999999999999
Q ss_pred eeEEEe--CCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 241 LGLLKT--SGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 241 ~~~~~~--~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++++.. ...+++||||++ ++|.+++... ...+++..+..++.|++.||+|||++||+||||||+||+++.++ .+
T Consensus 71 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~--~~ 147 (284)
T cd05081 71 KGVCYSAGRRNLRLVMEYLPYGSLRDYLQKH-RERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESEN--RV 147 (284)
T ss_pred EEEEccCCCCceEEEEEecCCCCHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCC--eE
Confidence 998754 346899999998 5999999732 34578999999999999999999999999999999999999999 89
Q ss_pred EEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
||+|||+++.......... ......++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 148 ~l~dfg~~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 201 (284)
T cd05081 148 KIGDFGLTKVLPQDKEYYK--------VREPGESPIFWYAPESLTESKFSVASDVWSFGVVL 201 (284)
T ss_pred EECCCcccccccCCCccee--------ecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHH
Confidence 9999999986432111000 00111234569999999988999999999999554
No 407
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.90 E-value=1.4e-23 Score=247.33 Aligned_cols=195 Identities=14% Similarity=0.112 Sum_probs=151.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||+|+||+||+|...- ........+++|.+... .......++. .|+.+++.++||||+++
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~--~~~~~~~~~~~k~~~~~-~~~~~~~~~~--------~~~~~l~~l~h~~iv~~ 74 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIP--EGDSIKIPVAIKTIQDR-SGRQTFQEIT--------DHMLAMGSLDHAYIVRL 74 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcC--CCCceeeEEEEeecccc-cchHHHHHHH--------HHHHHHhcCCCCCcceE
Confidence 4679999999999999999998531 00011235788887532 2222223333 78889999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++. ....++++||++ |+|.+++.. ....+++..+..++.||+.||.|||++|++||||||+|||++.++ .+||
T Consensus 75 ~~~~~-~~~~~~i~e~~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~--~~kl 150 (279)
T cd05111 75 LGICP-GASLQLVTQLSPLGSLLDHVRQ-HRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDS--IVQI 150 (279)
T ss_pred EEEEC-CCccEEEEEeCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCC--cEEE
Confidence 99875 456788999998 699999974 345689999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++......... ......++..|+|||.+.+..|+.++|+|+.|.+.
T Consensus 151 ~Dfg~~~~~~~~~~~~---------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il 201 (279)
T cd05111 151 ADFGVADLLYPDDKKY---------FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTV 201 (279)
T ss_pred cCCccceeccCCCccc---------ccCCCCCcccccCHHHhccCCcCchhhHHHHHHHH
Confidence 9999998543211100 01123466789999999988999999999999554
No 408
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.90 E-value=1.8e-23 Score=246.69 Aligned_cols=199 Identities=22% Similarity=0.272 Sum_probs=160.0
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++.+.||+|+||.||+|.+. .++..||+|.++...........+. +|+++++.++||||++++
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~------~~~~~v~vK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~ 66 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNK------ATGEIVAIKKFKESEDDEDVKKTAL--------REVKVLRQLRHENIVNLK 66 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeC------CCCcEEEEehhhhhcccccchhHHH--------HHHHHHHhcCCCCeeehh
Confidence 36999999999999999999964 4678999999875433322223333 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 242 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
+++..++..++||||+++++.+.+.. ....+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 67 ~~~~~~~~~~iv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~--~~kl~d 143 (288)
T cd07833 67 EAFRRKGRLYLVFEYVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESG--VLKLCD 143 (288)
T ss_pred heEEECCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--CEEEEe
Confidence 99999999999999999755554442 345589999999999999999999999999999999999999998 899999
Q ss_pred cCCcccCCCCCcccccCCCCcceeecccccCcccccccccccc-cccccccccccCccchhhhHhhhccccCCC
Q 000316 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1678)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-~y~~~~d~W~~G~isnfeyL~~ln~~aGRs 394 (1678)
||+++........ ......++..|+|||++.+. .++.++|+|+.|. +.+..+.|+.
T Consensus 144 ~g~~~~~~~~~~~----------~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~-------~l~~l~~g~~ 200 (288)
T cd07833 144 FGFARALRARPAS----------PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGC-------IMAELLDGEP 200 (288)
T ss_pred eecccccCCCccc----------cccCcccccCCcCCchhcCCCCcCchhhHHHHHH-------HHHHHHhCCC
Confidence 9999865422110 01123467889999999887 8899999999994 4444455653
No 409
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.90 E-value=2.8e-23 Score=246.27 Aligned_cols=197 Identities=14% Similarity=0.102 Sum_probs=157.6
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|.+.+.||+|+||.||+|++... ....++..+++|.+... .....+.+. +|+.+++.++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~-~~~~~~~~~~~k~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 72 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNL-SPTKDKMLVAVKALKDP--TLAARKDFQ--------REAELLTNLQHEHIVKF 72 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeecc-CCCCcceeeEEEecCCc--cHHHHHHHH--------HHHHHHhcCCCCCcceE
Confidence 45799999999999999999985321 12245677999998642 222223343 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCC
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPS 305 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~ 305 (1678)
++++...+..++||||++ ++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+
T Consensus 73 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~ 152 (291)
T cd05094 73 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATR 152 (291)
T ss_pred EEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcc
Confidence 999999999999999998 59999997422 234788999999999999999999999999999999
Q ss_pred CeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 306 NVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 306 NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||++.++ .+||+|||+++......... ......++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 153 Nil~~~~~--~~~l~dfg~a~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 215 (291)
T cd05094 153 NCLVGANL--LVKIGDFGMSRDVYSTDYYR---------VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVIL 215 (291)
T ss_pred eEEEccCC--cEEECCCCcccccCCCceee---------cCCCCCcceeecChHHhccCCCCchhhHHHHHHHH
Confidence 99999999 89999999998543211100 01123357789999999999999999999999553
No 410
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.90 E-value=1.4e-23 Score=246.91 Aligned_cols=200 Identities=16% Similarity=0.062 Sum_probs=156.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.+....+ ......||+|.+.... .......+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~-~~~~~~v~ik~~~~~~-~~~~~~~~~--------~e~~~l~~l~~~~i~~~ 74 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDG-DAVELQVAVKTLPESC-SEQDESDFL--------MEALIMSKFNHQNIVRL 74 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCC-CCCceeEEEEEcCCCC-CHHHHHHHH--------HHHHHHHhCCCCCEeeE
Confidence 3579999999999999999999642111 1256789999886532 223334455 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPN-----ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~-----~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
++++.+.+..++||||++| +|.+++..... ..+++..+..++.||+.||+|||+++++||||||+|||++.++.
T Consensus 75 ~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~ 154 (277)
T cd05036 75 IGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGP 154 (277)
T ss_pred EEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCC
Confidence 9999999999999999985 99999974321 25888999999999999999999999999999999999987542
Q ss_pred -eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 315 -SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 315 -~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
..+||+|||+++........... .....+..|+|||++.+..++.++|+|+.|+|.
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il 211 (277)
T cd05036 155 GRVAKIADFGMARDIYRASYYRKG---------GRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLL 211 (277)
T ss_pred CcceEeccCccccccCCccceecC---------CCCCccHhhCCHHHHhcCCcCchhHHHHHHHHH
Confidence 26999999999864311110000 001124579999999988999999999999664
No 411
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.90 E-value=7.9e-24 Score=245.81 Aligned_cols=183 Identities=18% Similarity=0.182 Sum_probs=152.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++.+.||+|+||.||++.. .+..+|+|.+.... ....+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~--------~~~~~~~k~~~~~~----~~~~~~--------~e~~~l~~l~~~~i~~~ 64 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDY--------RGNKVAVKCIKNDA----TAQAFL--------AEASVMTQLRHSNLVQL 64 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEE--------cCCcEEEEEeCCCc----hHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 46899999999999999999973 46779999986432 122344 89999999999999999
Q ss_pred eeEEE-eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 241 LGLLK-TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 241 ~~~~~-~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
++++. .++..|+||||+++ +|.++++......+++..+..++.|++.||+|||++||+||||||+||++++++ .+|
T Consensus 65 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~--~~k 142 (256)
T cd05082 65 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDN--VAK 142 (256)
T ss_pred EEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCC--cEE
Confidence 99764 55679999999985 999999854455688999999999999999999999999999999999999999 899
Q ss_pred EEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|+|||+++...... ....++..|+|||++.+..++.++|+|+.|++.
T Consensus 143 l~dfg~~~~~~~~~--------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~ 189 (256)
T cd05082 143 VSDFGLTKEASSTQ--------------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILL 189 (256)
T ss_pred ecCCccceeccccC--------------CCCccceeecCHHHHccCCCCchhhhHHHHHHH
Confidence 99999988543110 011234579999999998999999999999664
No 412
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.90 E-value=2.4e-23 Score=257.49 Aligned_cols=200 Identities=16% Similarity=0.180 Sum_probs=165.9
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
.+.|++.+.||.|.||.||+++++ .+++..|+|+.......+++ +. .|.++|+.. .|||++.
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~------~~~~~aa~kI~~~~~d~deE----iE-------~eynil~~~~~hpnv~~ 80 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHV------KTGQLAAIKIMDPTEDEEEE----IE-------LEYNMLKKYSHHPNVAT 80 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeee------ecCceeeeEeecCCccccHH----HH-------HHHHHHHhccCCCCcce
Confidence 567999999999999999999965 57888899998664333221 11 677888877 6899999
Q ss_pred eeeEEEe-----CCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC
Q 000316 240 VLGLLKT-----SGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 240 l~~~~~~-----~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g 313 (1678)
+|++|.. ++.++||||||. |+.-|+++...+..+.|..+.+|++.++.||.|||.+.++|||||-.|||++.++
T Consensus 81 fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~ 160 (953)
T KOG0587|consen 81 FYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENA 160 (953)
T ss_pred EEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccC
Confidence 9999874 458999999999 5999999987788899999999999999999999999999999999999999999
Q ss_pred ceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccccc-----ccccccccccccCccchhhhHhhhc
Q 000316 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-----MDWHSQFNRWWRGELSNFEYLLFLN 388 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-----~~y~~~~d~W~~G~isnfeyL~~ln 388 (1678)
.|||+|||++....... . ....|.|||.|||||++.. ..|+..+|.|+.| ++.+.
T Consensus 161 --~VKLvDFGvSaQldsT~-------g----rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLG-------ITaIE 220 (953)
T KOG0587|consen 161 --EVKLVDFGVSAQLDSTV-------G----RRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLG-------ITAIE 220 (953)
T ss_pred --cEEEeeeeeeeeeeccc-------c----cccCcCCCcccccceeeecccCCCCCcccccchhhcc-------ceeeh
Confidence 89999999998654211 1 1223679999999999864 4478899999999 77788
Q ss_pred cccCCC-CCC
Q 000316 389 KLAGRR-WGD 397 (1678)
Q Consensus 389 ~~aGRs-~~d 397 (1678)
+-.|.+ +.|
T Consensus 221 ladG~PPl~D 230 (953)
T KOG0587|consen 221 MAEGAPPLCD 230 (953)
T ss_pred hcCCCCCccC
Confidence 888876 344
No 413
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.90 E-value=1.9e-23 Score=248.41 Aligned_cols=203 Identities=18% Similarity=0.166 Sum_probs=157.1
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCC----------CccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLS----------GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG 230 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~----------~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~ 230 (1678)
.++|++.++||+|+||.||++++.-.. ....+...+|+|.+... .......++. +|+.+|+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~-~~~~~~~~~~--------~E~~~l~ 74 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLRED-ANKNARNDFL--------KEIKIMS 74 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEecccc-CCHHHHHHHH--------HHHHHHH
Confidence 357999999999999999998642100 11124567999998753 2223333444 8999999
Q ss_pred cCCCCcccceeeEEEeCCeEEEeccCCC-CCHHHHHhhCCC---------CCCCHHHHHHHHHHHHHHHHHHHhCCceec
Q 000316 231 CLRHPNVAPVLGLLKTSGLITSVIPKTP-YTLENILQFSPN---------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHR 300 (1678)
Q Consensus 231 ~l~HpNIV~l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~---------~~l~~~~i~~i~~qil~aL~yLH~~gIiHR 300 (1678)
.++||||+++++++...+..++||||++ ++|.+++..... ..++...+..++.|++.||+|||++||+||
T Consensus 75 ~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~ 154 (296)
T cd05095 75 RLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHR 154 (296)
T ss_pred hCCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 9999999999999999999999999998 599999974221 236677899999999999999999999999
Q ss_pred CCCCCCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccch
Q 000316 301 SVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSN 380 (1678)
Q Consensus 301 DLKP~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isn 380 (1678)
||||+|||++.++ .+||+|||+++......... ......++..|+|||...+..++.++|+|+.|++.
T Consensus 155 dlkp~Nili~~~~--~~~l~dfg~~~~~~~~~~~~---------~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l- 222 (296)
T cd05095 155 DLATRNCLVGKNY--TIKIADFGMSRNLYSGDYYR---------IQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTL- 222 (296)
T ss_pred cCChheEEEcCCC--CEEeccCcccccccCCccee---------ccCcCcCccccCCHHHHhcCCccchhhhhHHHHHH-
Confidence 9999999999988 89999999998543211000 01112245679999988888899999999999664
Q ss_pred hhhH
Q 000316 381 FEYL 384 (1678)
Q Consensus 381 feyL 384 (1678)
|+++
T Consensus 223 ~el~ 226 (296)
T cd05095 223 WEIL 226 (296)
T ss_pred HHHH
Confidence 4433
No 414
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.90 E-value=1.3e-23 Score=250.09 Aligned_cols=191 Identities=18% Similarity=0.159 Sum_probs=150.9
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccce
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPV 240 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~l 240 (1678)
++|++.+.||+|+||.||+|.... ......+++|.++.. ........+. +|+.++.++ +||||+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~----~~~~~~~~ik~~~~~-~~~~~~~~~~--------~E~~~l~~l~~hp~iv~~ 68 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKK----DGLKMNAAIKMLKEF-ASENDHRDFA--------GELEVLCKLGHHPNIINL 68 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecC----CCCcceeEEEEcccc-CCHHHHHHHH--------HHHHHHHhhcCCCchhhe
Confidence 579999999999999999998641 011234788887632 2222333444 899999999 79999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCC
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPS 305 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~ 305 (1678)
++++...+.+|+||||++ ++|.+++.... ...+++..++.++.|++.||+|||++||+||||||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~ 148 (297)
T cd05089 69 LGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAAR 148 (297)
T ss_pred EEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcc
Confidence 999999999999999998 59999997422 134788999999999999999999999999999999
Q ss_pred CeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 306 NVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 306 NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||++.++ .+||+|||+++...... ... ....+..|+|||.+.+..++.++|+|+.|++.
T Consensus 149 Nill~~~~--~~kl~dfg~~~~~~~~~------~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il 208 (297)
T cd05089 149 NVLVGENL--ASKIADFGLSRGEEVYV------KKT------MGRLPVRWMAIESLNYSVYTTKSDVWSFGVLL 208 (297)
T ss_pred eEEECCCC--eEEECCcCCCcccccee------ccC------CCCcCccccCchhhccCCCCchhhHHHHHHHH
Confidence 99999988 89999999987422100 000 01124569999999988999999999999654
No 415
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.90 E-value=1.7e-23 Score=258.85 Aligned_cols=198 Identities=17% Similarity=0.139 Sum_probs=155.7
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-CCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-HpNIV~ 239 (1678)
.++|.+.++||+|+||.||+|++.-. .....+..||+|+++.... ......+. +|+++|..+. |||||+
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~-~~~~~~~~vavK~l~~~~~-~~~~~~~~--------~E~~~l~~l~~H~niv~ 105 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGL-SHSQSTMKVAVKMLKSTAR-SSEKQALM--------SELKIMSHLGPHLNIVN 105 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCC-CCCCCceEEEEEecCCCCC-hhHHHHHH--------HHHHHHHhcCCCCCeEE
Confidence 45789999999999999999986421 1223567899999975422 22223344 8999999997 999999
Q ss_pred eeeEEEeCCeEEEeccCCC-CCHHHHHhhCCC------------------------------------------------
Q 000316 240 VLGLLKTSGLITSVIPKTP-YTLENILQFSPN------------------------------------------------ 270 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~------------------------------------------------ 270 (1678)
+++++...+.+++|||||+ |+|.++++....
T Consensus 106 ~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (401)
T cd05107 106 LLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDE 185 (401)
T ss_pred EEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCcc
Confidence 9999999999999999999 599999974211
Q ss_pred ------------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCC
Q 000316 271 ------------------------------------------------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSV 302 (1678)
Q Consensus 271 ------------------------------------------------~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDL 302 (1678)
..++...+..++.||+.||.|||+++|+||||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdl 265 (401)
T cd05107 186 SADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDL 265 (401)
T ss_pred ccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccC
Confidence 23566778889999999999999999999999
Q ss_pred CCCCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 303 CPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 303 KP~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
||+|||++.++ .+||+|||+++......... . .....+++.|||||.+.+..++.++|+|+.|.+.
T Consensus 266 kp~NiLl~~~~--~~kL~DfGla~~~~~~~~~~----~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil 331 (401)
T cd05107 266 AARNVLICEGK--LVKICDFGLARDIMRDSNYI----S-----KGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILL 331 (401)
T ss_pred CcceEEEeCCC--EEEEEecCcceecccccccc----c-----CCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHH
Confidence 99999999988 89999999998543211100 0 0011256789999999988899999999999553
No 416
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.90 E-value=3e-23 Score=232.47 Aligned_cols=282 Identities=17% Similarity=0.214 Sum_probs=217.7
Q ss_pred ccccccCCCCceEeecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCC
Q 000316 1275 ATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKG 1353 (1678)
Q Consensus 1275 ~~~~l~gH~~~V~~fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~Dg 1353 (1678)
+.-.+.||.+-|.++..+... ...++|||.||.|++||+. ..++.+++.|.|.|+.+++.. ..++|+|+ |+
T Consensus 58 Fv~~L~gHrdGV~~lakhp~~--ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgd----DK 129 (433)
T KOG0268|consen 58 FVGSLDGHRDGVSCLAKHPNK--LSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGD----DK 129 (433)
T ss_pred chhhccccccccchhhcCcch--hhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecC----Cc
Confidence 345678999999986544321 1238999999999999999 568999999999999999998 57888887 89
Q ss_pred eEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcEEeCCCcEEEEECCCCceeEEecccCccccccCCCCCCcccccccc
Q 000316 1354 TVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQ 1433 (1678)
Q Consensus 1354 tVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~laS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~ 1433 (1678)
+|+.|.++- ..+.++-| ...+..|.-+..+..+++|...|.|||.+...+++.+.-
T Consensus 130 tvK~wk~~~-~p~~tilg-~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smsw---------------------- 185 (433)
T KOG0268|consen 130 TVKQWKIDG-PPLHTILG-KSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSW---------------------- 185 (433)
T ss_pred ceeeeeccC-Ccceeeec-cccccccccccccccccccCceeeecccccCCccceeec----------------------
Confidence 999999764 46666653 556777776666777799999999999987776665542
Q ss_pred ccccccCCCCCCeEEeeecCCceeEeEeecCC-CEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCC
Q 000316 1434 VGMLNSNTLSSGILSTAFDGNLYTCLHHIECV-ERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGS 1512 (1678)
Q Consensus 1434 ~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g-~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~ 1512 (1678)
..+.+.++.++|.. ..|++|+.|++|.+||++++.+++...- ...-+.|||.|
T Consensus 186 ------------------G~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~-------~mRTN~IswnP- 239 (433)
T KOG0268|consen 186 ------------------GADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVIL-------TMRTNTICWNP- 239 (433)
T ss_pred ------------------CCCceeEEecCCCcchheeeeccCCceEEEecccCCccceeee-------eccccceecCc-
Confidence 22224444444443 4567788999999999999998876542 22235677764
Q ss_pred CccccCcccCCCCEEEEEecCCeEEEEeCCCC-cEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCC
Q 000316 1513 EKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG-NVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQP 1590 (1678)
Q Consensus 1513 ~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg-~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~ 1590 (1678)
. +-.+++|++|..++.||+|.. .++...++|...|.+|+ +|.|+-++|||.|++|+||.++.+....+
T Consensus 240 e----------afnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdi 309 (433)
T KOG0268|consen 240 E----------AFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDI 309 (433)
T ss_pred c----------ccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhh
Confidence 2 246889999999999999975 57888899999999999 99999999999999999999988754333
Q ss_pred eEeecCCCCEEE--EEecCCEEEEEeCCC-eEEEecCC
Q 000316 1591 TVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSK 1625 (1678)
Q Consensus 1591 ~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~ 1625 (1678)
+. .-....|.+ ||.|.++++|||+|+ |++|...+
T Consensus 310 Yh-tkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~A 346 (433)
T KOG0268|consen 310 YH-TKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKA 346 (433)
T ss_pred hh-HhhhheeeEEEEeccccEEEecCCCcceeeeecch
Confidence 21 111234554 999999999999999 99999653
No 417
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.90 E-value=1.8e-23 Score=243.18 Aligned_cols=189 Identities=17% Similarity=0.146 Sum_probs=156.7
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.+. ++..+|+|.+...... ..++. +|+.+++.++||||+++
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-------~~~~~~vK~~~~~~~~---~~~~~--------~e~~~l~~l~h~~i~~~ 66 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-------GTTKVAVKTLKPGTMS---PEAFL--------QEAQIMKKLRHDKLVQL 66 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-------CCceEEEEEecCCccC---HHHHH--------HHHHHHhhCCCCCEeee
Confidence 568999999999999999999853 3467999998754332 23344 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++......++||||+++ +|.+++.......++...++.++.|++.||.|||++||+||||||+||++++++ .+||
T Consensus 67 ~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~--~~~l 144 (261)
T cd05034 67 YAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENL--VCKI 144 (261)
T ss_pred eeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCC--CEEE
Confidence 9999998999999999985 999999855445789999999999999999999999999999999999999999 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++........ .......+..|+|||.+.+..++.++|+|+.|.+.
T Consensus 145 ~d~g~~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il 194 (261)
T cd05034 145 ADFGLARLIEDDEYT----------AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILL 194 (261)
T ss_pred Cccccceeccchhhh----------hhhccCCCccccCHHHhccCCcCchhHHHHHHHHH
Confidence 999999854321000 00111235679999999988899999999999554
No 418
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.90 E-value=1.4e-23 Score=244.29 Aligned_cols=188 Identities=17% Similarity=0.157 Sum_probs=153.7
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.++||+|+||.||+|.+. .+..+|+|.+....... ..+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-------~~~~~~~k~~~~~~~~~---~~~~--------~E~~~l~~l~~~~i~~~ 66 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-------GNTKVAVKTLKPGTMSP---ESFL--------EEAQIMKKLRHDKLVQL 66 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-------CCceeEEEEecCCCCCH---HHHH--------HHHHHHHhcCCCceEEE
Confidence 467999999999999999999853 45669999987643322 2344 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++. .+..|+||||+++ +|.+++.......+++..++.++.|++.||.|||++||+||||||+||++++++ .+||
T Consensus 67 ~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~--~~~l 143 (260)
T cd05070 67 YAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGL--VCKI 143 (260)
T ss_pred EeEEC-CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCc--eEEe
Confidence 99885 4568999999985 999999854455689999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++......... .....++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 144 ~dfg~~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 193 (260)
T cd05070 144 ADFGLARLIEDNEYTA----------RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 193 (260)
T ss_pred CCceeeeeccCccccc----------ccCCCCCccccChHHHhcCCCcchhhhHHHHHHH
Confidence 9999998543211000 0112245679999999888899999999999554
No 419
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.90 E-value=9.4e-24 Score=245.77 Aligned_cols=188 Identities=15% Similarity=0.153 Sum_probs=154.8
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|+++++||+|+||.||+|.. .++..+|+|.+...... ..++. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~-------~~~~~~a~K~~~~~~~~---~~~~~--------~E~~~l~~l~h~~i~~~ 66 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYY-------NGHTKVAIKSLKQGSMS---PEAFL--------AEANLMKQLQHPRLVRL 66 (260)
T ss_pred hHHceeeeeeccCccceEEeeec-------CCCceEEEEEecCCCCc---HHHHH--------HHHHHHHhcCCcCeeeE
Confidence 45799999999999999999985 25678999998764332 23444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++. .+..++||||++ ++|.+++.......++...+..++.|++.||+|||++|++||||||+||+++.++ .++|
T Consensus 67 ~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~--~~~l 143 (260)
T cd05067 67 YAVVT-QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETL--CCKI 143 (260)
T ss_pred EEEEc-cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCC--CEEE
Confidence 99874 457899999998 5999999865566789999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++........ ......++..|+|||.+....++.+.|+|+.|.+.
T Consensus 144 ~dfg~~~~~~~~~~~----------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l 193 (260)
T cd05067 144 ADFGLARLIEDNEYT----------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 193 (260)
T ss_pred ccCcceeecCCCCcc----------cccCCcccccccCHHHhccCCcCcccchHHHHHHH
Confidence 999999754311100 01122346689999999988899999999999553
No 420
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.90 E-value=1.6e-23 Score=245.12 Aligned_cols=193 Identities=16% Similarity=0.151 Sum_probs=150.0
Q ss_pred eeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeE
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1678)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~ 243 (1678)
|.+.+.||+|+||.||+|.... ......+|+|.++...........+. +|+.+++.++||||++++++
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~----~~~~~~~a~k~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~~~~~ 68 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQ----DDSILKVAVKTMKIAICTRSEMEDFL--------SEAVCMKEFDHPNVMRLIGV 68 (272)
T ss_pred CccccccCcccCceEEEeEEcc----CCCeeeEEEEecccCcCCHHHHHHHH--------HHHHHHHhCCCCCcceEEEE
Confidence 3467899999999999998641 11234689999876544444444454 89999999999999999997
Q ss_pred EEeC------CeEEEeccCCC-CCHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCC
Q 000316 244 LKTS------GLITSVIPKTP-YTLENILQFS----PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1678)
Q Consensus 244 ~~~~------~~~~lVmEy~~-g~L~~~l~~~----~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 312 (1678)
+... ...++||||++ |+|.+++... ....+++..+..++.|++.||+|||++||+||||||+|||++.+
T Consensus 69 ~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~ 148 (272)
T cd05075 69 CLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNEN 148 (272)
T ss_pred EccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCC
Confidence 6432 25789999998 5999887532 23447899999999999999999999999999999999999999
Q ss_pred CceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 313 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 313 g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+ .+||+|||+++......... . .....+++.|+|||...+..++.+.|+|+.|++.
T Consensus 149 ~--~~kl~Dfg~~~~~~~~~~~~------~---~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il 204 (272)
T cd05075 149 M--NVCVADFGLSKKIYNGDYYR------Q---GRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTM 204 (272)
T ss_pred C--CEEECCCCcccccCccccee------c---CCcccCCcccCCHHHccCCCcChHHHHHHHHHHH
Confidence 8 89999999998643211100 0 0111246689999999999999999999999654
No 421
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.90 E-value=2e-23 Score=247.34 Aligned_cols=196 Identities=17% Similarity=0.161 Sum_probs=154.7
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.+.||+|+||.||+|.+.... .......+|+|.+.... ......++. +|+.+++.++||||+++++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~-~~~~~~~~~~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~~~ 70 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLK-GRAGYTTVAVKMLKENA-SSSELRDLL--------SEFNLLKQVNHPHVIKLYG 70 (290)
T ss_pred CccccccccCcCCcceEEEEEecCC-CCCcceeEEEEecCCCC-CHHHHHHHH--------HHHHHHhhCCCCCEeeEEE
Confidence 5888999999999999999864211 12344678999886532 223333444 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCC-CCHHHHHhhCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcee
Q 000316 243 LLKTSGLITSVIPKTP-YTLENILQFSP----------------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAH 299 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~-g~L~~~l~~~~----------------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiH 299 (1678)
.+..++..++||||++ ++|.+++.... ...++...+..++.|++.||.|||++||+|
T Consensus 71 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH 150 (290)
T cd05045 71 ACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVH 150 (290)
T ss_pred EEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeeh
Confidence 9999999999999999 59999986421 134778889999999999999999999999
Q ss_pred cCCCCCCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 300 RSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 300 RDLKP~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||||+|||+++++ .+||+|||+++.......... .....++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 151 ~dikp~nill~~~~--~~kl~dfg~~~~~~~~~~~~~---------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l 219 (290)
T cd05045 151 RDLAARNVLVAEGR--KMKISDFGLSRDVYEEDSYVK---------RSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 219 (290)
T ss_pred hhhhhheEEEcCCC--cEEeccccccccccCccchhc---------ccCCCCCccccCHHHHccCCcchHhHHHHHHHHH
Confidence 99999999999998 899999999985432111000 0111245689999999888899999999999553
No 422
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.90 E-value=1.5e-24 Score=261.37 Aligned_cols=191 Identities=14% Similarity=0.150 Sum_probs=158.8
Q ss_pred eEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh--HHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 165 FPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG--QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 165 ~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+....||+|+|-+||+|.|. .+|..||.-.++..+... ....++. .|+++|+.|+|||||++|+
T Consensus 43 k~~evLGrGafKtVYka~De------~~giEVAWnqvk~~d~~q~~~~leR~~--------~Ev~lLKsL~H~NIirfy~ 108 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDE------EEGIEVAWNQVKIRDVTQSPEELERLY--------SEVHLLKSLKHPNIIRFYD 108 (632)
T ss_pred ehhhhcccccceeeeecccc------ccchhhHHHHHhHHHhhcChHHHHHHH--------HHHHHHccCCCCceeeeee
Confidence 34678999999999999975 578888876665433322 2224444 9999999999999999999
Q ss_pred EEEeCCe--EEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC--CceecCCCCCCeEecCCCceeE
Q 000316 243 LLKTSGL--ITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSL--GIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 243 ~~~~~~~--~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~--gIiHRDLKP~NILl~~~g~~~l 317 (1678)
.+.+..+ +.+|.|.+. |+|..|++ +.+.++...++.|++||++||.|||++ .|||||||.+||+|+.+. +.|
T Consensus 109 SW~d~~n~~in~iTEL~TSGtLr~Y~k--k~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~-G~V 185 (632)
T KOG0584|consen 109 SWVDTDNKTINFITELFTSGTLREYRK--KHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNL-GEV 185 (632)
T ss_pred heecCCCceeeeeeecccCCcHHHHHH--HhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCc-Cce
Confidence 9998765 889999998 79999999 566788999999999999999999996 699999999999999875 499
Q ss_pred EEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCC
Q 000316 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1678)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGR 393 (1678)
||.|+|||+..... +...|.|||.|||||+.. ..|+..+|++++| .+.|++..+-
T Consensus 186 KIGDLGLAtl~r~s-------------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFG-------MCmLEMvT~e 240 (632)
T KOG0584|consen 186 KIGDLGLATLLRKS-------------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFG-------MCMLEMVTSE 240 (632)
T ss_pred eecchhHHHHhhcc-------------ccceeccCccccChHHHh-hhcchhhhhhhhh-------HHHHHHHhcc
Confidence 99999999865421 122367999999999998 7899999999999 6777777664
No 423
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.90 E-value=3.7e-24 Score=233.20 Aligned_cols=211 Identities=16% Similarity=0.173 Sum_probs=166.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-CCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-HpNIV~ 239 (1678)
.++.+.+..||.|+.|.|++++.+ .+|.+.|||.+.+.. ..++.++.+ ..+.++...+ .|.||+
T Consensus 91 indl~~l~dlGsGtcG~V~k~~~r------s~~~iiAVK~M~rt~-Nkee~kRIL--------mDldvv~~s~dcpyIV~ 155 (391)
T KOG0983|consen 91 INDLENLGDLGSGTCGQVWKMRFR------STGHIIAVKQMRRTG-NKEENKRIL--------MDLDVVLKSHDCPYIVQ 155 (391)
T ss_pred hHHhhhHHhhcCCCccceEEEEEc------ccceEEEEEeecccC-CHHHHHHHH--------HhhhHHhhccCCCeeee
Confidence 456788999999999999999965 578999999998753 334444454 6777665554 799999
Q ss_pred eeeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
.+|+|..+..++|.||.|...++.+++. -.++++|..+-.+...+++||.||.+ +||||||+||+|||+|+.| .+|
T Consensus 156 c~GyFi~n~dV~IcMelMs~C~ekLlkr-ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~G--niK 232 (391)
T KOG0983|consen 156 CFGYFITNTDVFICMELMSTCAEKLLKR-IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG--NIK 232 (391)
T ss_pred eeeEEeeCchHHHHHHHHHHHHHHHHHH-hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCC--CEE
Confidence 9999999999999999999888888875 35569999999999999999999998 6999999999999999999 999
Q ss_pred EEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc---cccccccccccccCccchhhhHhhhccccCCCC
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1678)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~---~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs~ 395 (1678)
|||||++....... ..+.. .|-+.|||||.+. ...|+-.+|+|+.| ++..+...|+..
T Consensus 233 lCDFGIsGrlvdSk----Ahtrs--------AGC~~YMaPERidp~~~~kYDiRaDVWSlG-------ITlveLaTg~yP 293 (391)
T KOG0983|consen 233 LCDFGISGRLVDSK----AHTRS--------AGCAAYMAPERIDPPDKPKYDIRADVWSLG-------ITLVELATGQYP 293 (391)
T ss_pred eecccccceeeccc----ccccc--------cCCccccCccccCCCCCCccchhhhhhhhc-------cchhhhhcccCC
Confidence 99999998654311 11111 2446899999875 45688899999999 666777777654
Q ss_pred CCC--cCCcccceEe
Q 000316 396 GDY--TFHMVMPWVI 408 (1678)
Q Consensus 396 ~dl--~q~pv~pwv~ 408 (1678)
... +.+-++--|+
T Consensus 294 y~~c~tdFe~ltkvl 308 (391)
T KOG0983|consen 294 YKGCKTDFEVLTKVL 308 (391)
T ss_pred CCCCCccHHHHHHHH
Confidence 433 3344444444
No 424
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.90 E-value=3.1e-23 Score=242.12 Aligned_cols=192 Identities=14% Similarity=0.112 Sum_probs=154.8
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcC---hHHHHHHHHhcCCCchhHHHhhccCCCCccc
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKAS---GQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~---~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV 238 (1678)
.+|++.+.||+|+||.||+|++. .++..+|+|.+...... ......+. +|+++++.++||||+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~~~--------~ei~~l~~l~h~~i~ 67 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDA------DTGRELAVKQVPFDPDSQETSKEVNALE--------CEIQLLKNLRHDRIV 67 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEc------CCCCEEEEEEEecCcccchhhHHHHHHH--------HHHHHHHHcCCCCcc
Confidence 46999999999999999999964 46789999987543211 12222333 899999999999999
Q ss_pred ceeeEEEeC--CeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCce
Q 000316 239 PVLGLLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1678)
Q Consensus 239 ~l~~~~~~~--~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~ 315 (1678)
++++++.+. ..+++||||+++ +|.+++. ....+++..++.++.|++.||.|||++||+||||||+||+++.++
T Consensus 68 ~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~-- 143 (264)
T cd06653 68 QYYGCLRDPEEKKLSIFVEYMPGGSIKDQLK--AYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAG-- 143 (264)
T ss_pred eEEEEEEcCCCCEEEEEEEeCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC--
Confidence 999998764 468999999985 9999987 345588999999999999999999999999999999999999988
Q ss_pred eEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 316 ~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
.+||+|||+++......... . ......++..|+|||.+.+..++.++|+|+.|++.
T Consensus 144 ~~~l~dfg~~~~~~~~~~~~---~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 199 (264)
T cd06653 144 NVKLGDFGASKRIQTICMSG---T-----GIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTV 199 (264)
T ss_pred CEEECccccccccccccccC---c-----cccccCCcccccCHhhhcCCCCCccccHHHHHHHH
Confidence 89999999998643211000 0 01122468889999999988899999999999554
No 425
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.90 E-value=1.2e-23 Score=245.03 Aligned_cols=186 Identities=15% Similarity=0.141 Sum_probs=146.7
Q ss_pred eeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeCC
Q 000316 169 FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 248 (1678)
Q Consensus 169 ~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~~ 248 (1678)
.||+|+||.||+|.... ...+..+|+|.+... ........+. +|+.+++.++||||+++++++. ..
T Consensus 2 ~ig~G~~g~v~~~~~~~----~~~~~~vavk~~~~~-~~~~~~~~~~--------~E~~~l~~l~h~~ii~~~~~~~-~~ 67 (257)
T cd05115 2 ELGSGNFGCVKKGVYKM----RKKQIDVAIKVLKNE-NEKSVRDEMM--------REAEIMHQLDNPYIVRMIGVCE-AE 67 (257)
T ss_pred ccCCCCcccEEEEEEec----CCCceeEEEEEcccc-cChHHHHHHH--------HHHHHHHhcCCCCeEEEEEEEc-CC
Confidence 48999999999997542 134567999998653 2222233344 8999999999999999999886 45
Q ss_pred eEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCccc
Q 000316 249 LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1678)
Q Consensus 249 ~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~ 327 (1678)
..++||||+++ +|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++.
T Consensus 68 ~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~--~~kl~dfg~~~~ 144 (257)
T cd05115 68 ALMLVMEMASGGPLNKFLSG-KKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQH--YAKISDFGLSKA 144 (257)
T ss_pred CeEEEEEeCCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCC--cEEeccCCcccc
Confidence 78999999985 99999873 345689999999999999999999999999999999999999998 899999999985
Q ss_pred CCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 328 NSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
......... . .....++..|+|||.+....++.++|+|+.|.+.
T Consensus 145 ~~~~~~~~~---~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 188 (257)
T cd05115 145 LGADDSYYK---A-----RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITM 188 (257)
T ss_pred ccCCcccee---c-----cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHH
Confidence 432111100 0 0111235689999999888899999999999654
No 426
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.90 E-value=1.2e-23 Score=244.83 Aligned_cols=189 Identities=13% Similarity=0.104 Sum_probs=157.7
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|+++++||+|+||.||+|.+. .+..+|+|.+..... ....++. +|+.+++.++||||+++
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~-------~~~~~~~k~~~~~~~--~~~~~~~--------~e~~~l~~l~~~~i~~~ 67 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWK-------NRVRVAIKILKSDDL--LKQQDFQ--------KEVQALKRLRHKHLISL 67 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEec-------CCCcEEEEeccccch--hhHHHHH--------HHHHHHhcCCCcchhhe
Confidence 457999999999999999999963 377899999865322 1222333 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+.+..++||||+++ +|.+++.......++...+..++.||+.||.|||++||+||||||+||+++.++ .+||
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~--~~kl 145 (261)
T cd05148 68 FAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDL--VCKV 145 (261)
T ss_pred eeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCc--eEEE
Confidence 9999999999999999995 999999865556789999999999999999999999999999999999999999 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++........ .....++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 146 ~d~g~~~~~~~~~~~-----------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l 194 (261)
T cd05148 146 ADFGLARLIKEDVYL-----------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILL 194 (261)
T ss_pred ccccchhhcCCcccc-----------ccCCCCceEecCHHHHccCCCCchhhHHHHHHHH
Confidence 999999854321100 1122356679999999888999999999999543
No 427
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.90 E-value=3.7e-23 Score=241.26 Aligned_cols=192 Identities=21% Similarity=0.195 Sum_probs=154.0
Q ss_pred eEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEE
Q 000316 165 FPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLL 244 (1678)
Q Consensus 165 ~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~ 244 (1678)
++.+.||.|+||.||+|.... .....+..|+||.++.. .......+++ +|++.++.++||||+++++++
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~--~~~~~~~~V~vk~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~ni~~~~g~~ 70 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQ--KDNDKNQPVAVKILKPS-SSEEEEEEFL--------NEIQILRKLRHPNIVKLYGFC 70 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEES--TTTSSEEEEEEEEESTT-SSHHHHHHHH--------HHHHHHHTHSBTTBE-EEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEc--ccCCCCEEEEEEEeccc-cccccceeee--------ecccccccccccccccccccc
Confidence 568899999999999999652 22356788999999542 3334455665 899999999999999999999
Q ss_pred EeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecC
Q 000316 245 KTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1678)
Q Consensus 245 ~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFG 323 (1678)
...+..++||||++ |+|.++|.......++...+..++.||+.||.|||+++|+||||+|+|||++.++ .+||+|||
T Consensus 71 ~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~--~~Kl~~f~ 148 (259)
T PF07714_consen 71 IENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNG--QVKLSDFG 148 (259)
T ss_dssp ESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTT--EEEEESTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccc
Confidence 98888999999999 5999999965457789999999999999999999999999999999999999999 99999999
Q ss_pred CcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCcc
Q 000316 324 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1678)
Q Consensus 324 lA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~i 378 (1678)
+++........ ...........|+|||.+.+..++.++|+|++|.+
T Consensus 149 ~~~~~~~~~~~---------~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~ 194 (259)
T PF07714_consen 149 LSRPISEKSKY---------KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGML 194 (259)
T ss_dssp TGEETTTSSSE---------EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHH
T ss_pred ccccccccccc---------ccccccccccccccccccccccccccccccccccc
Confidence 99865211111 11112235678999999999999999999999933
No 428
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.90 E-value=1.9e-23 Score=243.26 Aligned_cols=188 Identities=15% Similarity=0.126 Sum_probs=153.5
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.++||+|+||.||++... .+..+|+|.+.... .....+. +|+.+++.++|+||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-------~~~~~~iK~~~~~~---~~~~~~~--------~e~~~l~~l~~~~i~~~ 66 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-------KHTKVAVKTMKPGS---MSVEAFL--------AEANVMKTLQHDKLVKL 66 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-------CCccEEEEecCCCh---hHHHHHH--------HHHHHHHhcCCCCcceE
Confidence 568999999999999999999843 34569999876432 1223344 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.. ...+++|||++ ++|.+++.......++...++.++.|++.||.|||++|++||||||+||+++.++ .+||
T Consensus 67 ~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~--~~~l 143 (260)
T cd05073 67 HAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASL--VCKI 143 (260)
T ss_pred EEEEcC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCC--cEEE
Confidence 999987 77899999998 5999999854555678888999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++......... .....++..|+|||++....++..+|+|+.|.+.
T Consensus 144 ~d~~~~~~~~~~~~~~----------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l 193 (260)
T cd05073 144 ADFGLARVIEDNEYTA----------REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL 193 (260)
T ss_pred CCCcceeeccCCCccc----------ccCCcccccccCHhHhccCCcCccccchHHHHHH
Confidence 9999997543211100 0111245679999999988899999999999654
No 429
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.90 E-value=3.1e-23 Score=246.54 Aligned_cols=208 Identities=12% Similarity=0.013 Sum_probs=147.5
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHH-hcCCCchhHHHhhccCCCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLR-LIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~-~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..+|++.+.||+|+||.||+|.+.- ....+..+|+|+...............+ ......+.+...+..+.|+||++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~---~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~ 87 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCAS---DHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPK 87 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcC---CcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCc
Confidence 3579999999999999999998541 1112456777764432221111111110 00011124555667789999999
Q ss_pred eeeEEEeCC----eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCce
Q 000316 240 VLGLLKTSG----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1678)
Q Consensus 240 l~~~~~~~~----~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~ 315 (1678)
++++..... ..+++||++..++.+++.. ....++..++.++.|++.||+|||+++|+||||||+|||++.++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~-- 163 (294)
T PHA02882 88 YYGCGSFKRCRMYYRFILLEKLVENTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNN-- 163 (294)
T ss_pred EEEeeeEecCCceEEEEEEehhccCHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC--
Confidence 999876544 4578899988888888763 33467888999999999999999999999999999999999988
Q ss_pred eEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 316 ~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
.+||+|||+|+............. .......||+.|+|||+..+..|+.++|+|+.|++.
T Consensus 164 ~~~l~DFGla~~~~~~~~~~~~~~----~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l 223 (294)
T PHA02882 164 RGYIIDYGIASHFIIHGKHIEYSK----EQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCM 223 (294)
T ss_pred cEEEEEcCCceeeccCCccccccc----ccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHH
Confidence 899999999986432111100000 011123489999999999999999999999999543
No 430
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.90 E-value=4.3e-23 Score=242.92 Aligned_cols=194 Identities=18% Similarity=0.170 Sum_probs=155.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++++.||+|+||.||+|..+... ......+|+|.+..... .....++. +|+.+++.++||||+++
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~--~~~~~~~aik~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~~i~~~ 74 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEG--EKVKIPVAIKVLREETS-PKANKEIL--------DEAYVMASVDHPHVVRL 74 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCC--CCcceEEEEEeccCCCC-HHHHHHHH--------HHHHHHHhCCCCCcceE
Confidence 467999999999999999999864211 11245799998865432 22333444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+ ...++||||++ |+|.+++.. ....+++..+..++.||+.||+|||++||+||||||+|||++.++ .+||
T Consensus 75 ~~~~~~-~~~~~v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~--~~kL 150 (279)
T cd05057 75 LGICLS-SQVQLITQLMPLGCLLDYVRN-HKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQ--HVKI 150 (279)
T ss_pred EEEEec-CceEEEEecCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCC--eEEE
Confidence 999987 78999999998 599999984 344589999999999999999999999999999999999999988 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCcc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~i 378 (1678)
+|||+++......... . .....++..|+|||.+....++.++|+|+.|.+
T Consensus 151 ~dfg~~~~~~~~~~~~----~-----~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~ 200 (279)
T cd05057 151 TDFGLAKLLDVDEKEY----H-----AEGGKVPIKWMALESILHRIYTHKSDVWSYGVT 200 (279)
T ss_pred CCCcccccccCcccce----e-----cCCCcccccccCHHHhhcCCcCchhhHHHHHHH
Confidence 9999998654211110 0 011224567999999988899999999999965
No 431
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.90 E-value=2.2e-22 Score=234.10 Aligned_cols=271 Identities=18% Similarity=0.254 Sum_probs=216.5
Q ss_pred cccEEEEEEecCC--CEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcEEeC--CCcEEEEECCC
Q 000316 1327 HGALRSVAVGQDE--CTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQT 1402 (1678)
Q Consensus 1327 ~~~V~svafspdg--~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~laS~--DgtVrIWD~~t 1402 (1678)
.++|.+++|+|.. ...+|+| ..|.|++..+.....++....+.|++++|-.||..+|.+ .|.|+|+|..+
T Consensus 26 ~~~vssl~fsp~~P~d~aVt~S------~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~ 99 (487)
T KOG0310|consen 26 HNSVSSLCFSPKHPYDFAVTSS------VRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKS 99 (487)
T ss_pred cCcceeEecCCCCCCceEEecc------cEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEecccc
Confidence 4689999999954 3455555 689999999988888888899999999999898888766 58999999766
Q ss_pred CceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEEC
Q 000316 1403 GKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDI 1482 (1678)
Q Consensus 1403 g~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl 1482 (1678)
...++.+.. |+.++..+.|++. ++..+++|+.|+.+++||+
T Consensus 100 r~iLR~~~a------------------------------h~apv~~~~f~~~---------d~t~l~s~sDd~v~k~~d~ 140 (487)
T KOG0310|consen 100 RVILRQLYA------------------------------HQAPVHVTKFSPQ---------DNTMLVSGSDDKVVKYWDL 140 (487)
T ss_pred HHHHHHHhh------------------------------ccCceeEEEeccc---------CCeEEEecCCCceEEEEEc
Confidence 445555544 3455666666654 5677889999999999999
Q ss_pred CCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCC-cEEEEEeccCCCeEEEE
Q 000316 1483 NQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG-NVIASWRAHDGYVTKLA 1561 (1678)
Q Consensus 1483 ~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg-~~i~~l~gH~~~V~sva 1561 (1678)
.+......+.+ |...|+|.++++ .++.+++||+.||.|++||+|+. ..+..+. |..+|-+|.
T Consensus 141 s~a~v~~~l~~------htDYVR~g~~~~----------~~~hivvtGsYDg~vrl~DtR~~~~~v~eln-hg~pVe~vl 203 (487)
T KOG0310|consen 141 STAYVQAELSG------HTDYVRCGDISP----------ANDHIVVTGSYDGKVRLWDTRSLTSRVVELN-HGCPVESVL 203 (487)
T ss_pred CCcEEEEEecC------CcceeEeecccc----------CCCeEEEecCCCceEEEEEeccCCceeEEec-CCCceeeEE
Confidence 99886556664 456789988875 34479999999999999999987 6677776 899999999
Q ss_pred -cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEE--EEecCCEEEEEeCCC-eEEEecCCCCCCCCcceecc
Q 000316 1562 -APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVP 1637 (1678)
Q Consensus 1562 -spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~ 1637 (1678)
-|.|..+||++ ...|+|||+.+|. +.+..+..|...|+| +..++..|+|||-|+ +++||+.+
T Consensus 204 ~lpsgs~iasAg-Gn~vkVWDl~~G~-qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~------------ 269 (487)
T KOG0310|consen 204 ALPSGSLIASAG-GNSVKVWDLTTGG-QLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTN------------ 269 (487)
T ss_pred EcCCCCEEEEcC-CCeEEEEEecCCc-eehhhhhcccceEEEEEeecCCceEeecccccceEEEEccc------------
Confidence 88999999998 5699999999774 444556669999997 677889999999999 99999641
Q ss_pred ceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEE
Q 000316 1638 QKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRL 1676 (1678)
Q Consensus 1638 ~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrI 1676 (1678)
|....+.+..++|.+++++|+++.++.|..||.+-+
T Consensus 270 ---~Kvv~s~~~~~pvLsiavs~dd~t~viGmsnGlv~~ 305 (487)
T KOG0310|consen 270 ---YKVVHSWKYPGPVLSIAVSPDDQTVVIGMSNGLVSI 305 (487)
T ss_pred ---eEEEEeeecccceeeEEecCCCceEEEecccceeee
Confidence 111112246789999999999999999999998754
No 432
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.90 E-value=3.7e-23 Score=248.20 Aligned_cols=199 Identities=16% Similarity=0.168 Sum_probs=156.3
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCC-CccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLS-GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 238 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~-~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV 238 (1678)
.++|++.++||+|+||.||+|++.... ........+|+|.++... ......++. +|+++++.+ +||||+
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~--------~E~~~l~~l~~h~~iv 81 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-TDKDLADLI--------SEMELMKLIGKHKNII 81 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-ChHHHHHHH--------HHHHHHHhccCCCCee
Confidence 468999999999999999999853211 111345679999987532 233333444 899999999 699999
Q ss_pred ceeeEEEeCCeEEEeccCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCC
Q 000316 239 PVLGLLKTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVC 303 (1678)
Q Consensus 239 ~l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLK 303 (1678)
++++++...+.+|+||||++ |+|.+++.... ...++...+..++.||+.||.|||++||+|||||
T Consensus 82 ~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlk 161 (314)
T cd05099 82 NLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLA 161 (314)
T ss_pred eEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecccc
Confidence 99999999999999999998 59999997422 2357888899999999999999999999999999
Q ss_pred CCCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 304 PSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 304 P~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|+|||++.++ .+||+|||+++......... .. ....++..|||||.+.+..++.++|+|+.|.+.
T Consensus 162 p~Nill~~~~--~~kL~Dfg~~~~~~~~~~~~---~~------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l 226 (314)
T cd05099 162 ARNVLVTEDN--VMKIADFGLARGVHDIDYYK---KT------SNGRLPVKWMAPEALFDRVYTHQSDVWSFGILM 226 (314)
T ss_pred ceeEEEcCCC--cEEEcccccccccccccccc---cc------ccCCCCccccCHHHHccCCcCccchhhHHHHHH
Confidence 9999999998 89999999998543211100 00 001134579999999988999999999999664
No 433
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.90 E-value=1.5e-23 Score=244.11 Aligned_cols=188 Identities=16% Similarity=0.153 Sum_probs=152.1
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.+. .+..+|+|.+...... ...+. +|+++++.++||||+++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-------~~~~~~lK~~~~~~~~---~~~~~--------~E~~~l~~l~h~~i~~~ 66 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWN-------GTTKVAIKTLKPGTMM---PEAFL--------QEAQIMKKLRHDKLVPL 66 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEc-------CCceEEEEEcccCCcc---HHHHH--------HHHHHHHhCCCCCeeeE
Confidence 357999999999999999999853 3345899987654322 22333 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++. .+..++||||+++ +|.+++.......++...+..++.|++.||.|||++||+||||||+||++++++ .+||
T Consensus 67 ~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~--~~~l 143 (260)
T cd05069 67 YAVVS-EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNL--VCKI 143 (260)
T ss_pred EEEEc-CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCC--eEEE
Confidence 99885 4568999999985 999999854455678899999999999999999999999999999999999999 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++......... .....++..|+|||...+..++..+|+|+.|.+.
T Consensus 144 ~dfg~~~~~~~~~~~~----------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l 193 (260)
T cd05069 144 ADFGLARLIEDNEYTA----------RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 193 (260)
T ss_pred CCCccceEccCCcccc----------cCCCccchhhCCHHHhccCCcChHHHHHHHHHHH
Confidence 9999998543211100 0112245679999999888899999999999654
No 434
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.90 E-value=3.3e-23 Score=250.93 Aligned_cols=198 Identities=17% Similarity=0.153 Sum_probs=155.0
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCC-CccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLS-GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~-~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
.+|++++.||+|+||.||+|++.-.. ........+|+|.++.. .......++. +|+++++++ +||||++
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~--------~E~~~l~~l~~h~~iv~ 82 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD-ATDKDLSDLV--------SEMEMMKMIGKHKNIIN 82 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc-cCHHHHHHHH--------HHHHHHHhhcCCCCeee
Confidence 47999999999999999999853211 11123457999988643 2233334444 899999999 7999999
Q ss_pred eeeEEEeCCeEEEeccCCCC-CHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCC
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 304 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP 304 (1678)
+++++..++.+++||||+++ +|.+++.... ...++...+..++.|++.||.|||++||+||||||
T Consensus 83 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp 162 (334)
T cd05100 83 LLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAA 162 (334)
T ss_pred eeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeecccccc
Confidence 99999999999999999984 9999997421 23467778889999999999999999999999999
Q ss_pred CCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 305 SNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 305 ~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||++.++ .+||+|||+++......... . .....++..|||||++.+..++.++|+|+.|.+.
T Consensus 163 ~Nill~~~~--~~kL~Dfg~~~~~~~~~~~~---~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 226 (334)
T cd05100 163 RNVLVTEDN--VMKIADFGLARDVHNIDYYK---K------TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLL 226 (334)
T ss_pred ceEEEcCCC--cEEECCcccceecccccccc---c------ccCCCcCceEcCHHHhccCCcCchhhhHHHHHHH
Confidence 999999998 89999999998543211100 0 0111234679999999999999999999999654
No 435
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.90 E-value=3.6e-23 Score=242.30 Aligned_cols=188 Identities=19% Similarity=0.095 Sum_probs=145.6
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeC
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~ 247 (1678)
+.||+|+||.||+|... ....+..+|+|.++... .......+. +|+.+++.++||||+++++++.+.
T Consensus 1 ~~lg~G~~g~Vy~~~~~----~~~~~~~~~~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~~~~~~~~ 67 (269)
T cd05087 1 KEIGNGWFGKVILGEVN----SGYTPAQVVVKELRVSA-SVQEQMKFL--------EEAQPYRSLQHSNLLQCLGQCTEV 67 (269)
T ss_pred CcccccCCceEEEEEEc----CCCCceEEEEEecCCCC-ChHHHHHHH--------HHHHHHHhCCCCCEeeEEEEEcCC
Confidence 46999999999999853 12346779999986542 222333444 899999999999999999999999
Q ss_pred CeEEEeccCCC-CCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecC
Q 000316 248 GLITSVIPKTP-YTLENILQFSP---NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1678)
Q Consensus 248 ~~~~lVmEy~~-g~L~~~l~~~~---~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFG 323 (1678)
...++||||++ |+|.+++.... ....+...++.++.|++.||+|||++||+||||||+||+++.++ .+||+|||
T Consensus 68 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~--~~kL~dfg 145 (269)
T cd05087 68 TPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADL--TVKIGDYG 145 (269)
T ss_pred CCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCC--cEEECCcc
Confidence 99999999999 59999997422 22456677888999999999999999999999999999999988 89999999
Q ss_pred CcccCCCCCcccccCCCCcceeecccccCcccccccccccc-------cccccccccccCccc
Q 000316 324 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-------DWHSQFNRWWRGELS 379 (1678)
Q Consensus 324 lA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-------~y~~~~d~W~~G~is 379 (1678)
+++......... ......++..|+|||++.+. .++.++|+|+.|.+.
T Consensus 146 ~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l 199 (269)
T cd05087 146 LSHNKYKEDYYV---------TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTI 199 (269)
T ss_pred ccccccCcceee---------cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHH
Confidence 997432111000 01112356789999988643 357799999999553
No 436
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.90 E-value=2e-23 Score=241.26 Aligned_cols=183 Identities=16% Similarity=0.145 Sum_probs=148.0
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeC
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~ 247 (1678)
+.||+|+||.||+|.. .++..+|+|.+.... .......+. +|+.+++.++||||+++++++...
T Consensus 1 ~~ig~g~~g~vy~~~~-------~~~~~~a~K~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~~~~~~ 64 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-------KDKTPVAVKTCKEDL-PQELKIKFL--------SEARILKQYDHPNIVKLIGVCTQR 64 (250)
T ss_pred CccCCCCCceEEEEEe-------cCCcEEEEEecCCcC-CHHHHHHHH--------HHHHHHHhCCCCCcCeEEEEEecC
Confidence 4699999999999984 356789999986532 222223344 899999999999999999999999
Q ss_pred CeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCcc
Q 000316 248 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1678)
Q Consensus 248 ~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~ 326 (1678)
+..++||||+++ +|.+++.. ....+++..+..++.|++.||.|||++|++||||||+||+++.++ .+||+|||+++
T Consensus 65 ~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~--~~~l~d~g~~~ 141 (250)
T cd05085 65 QPIYIVMELVPGGDFLSFLRK-KKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENN--VLKISDFGMSR 141 (250)
T ss_pred CccEEEEECCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCC--eEEECCCccce
Confidence 999999999984 99999874 234578999999999999999999999999999999999999998 89999999987
Q ss_pred cCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 327 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
........ . .....++..|+|||++.+..++.+.|+|+.|.+.
T Consensus 142 ~~~~~~~~----~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll 184 (250)
T cd05085 142 QEDDGIYS----S------SGLKQIPIKWTAPEALNYGRYSSESDVWSYGILL 184 (250)
T ss_pred eccccccc----c------CCCCCCcccccCHHHhccCCCCchhHHHHHHHHH
Confidence 53311100 0 0011235679999999988899999999999553
No 437
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.90 E-value=5e-21 Score=213.53 Aligned_cols=276 Identities=12% Similarity=0.117 Sum_probs=214.8
Q ss_pred CCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEe
Q 000316 1283 EPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWE 1359 (1678)
Q Consensus 1283 ~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWD 1359 (1678)
.+.|.+ |+.+|.. +++++.|.+++|||.. |.+++++..+...|..++|......++.++. ..|.+||.-+
T Consensus 14 ~~~i~sl~fs~~G~~-----litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sSt--k~d~tIryLs 86 (311)
T KOG1446|consen 14 NGKINSLDFSDDGLL-----LITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSST--KEDDTIRYLS 86 (311)
T ss_pred CCceeEEEecCCCCE-----EEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccC--CCCCceEEEE
Confidence 355664 8999987 9999999999999987 8999999999999999999988887887775 5789999999
Q ss_pred CCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCcccccccccccc
Q 000316 1360 LTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGML 1437 (1678)
Q Consensus 1360 l~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~ 1437 (1678)
+.+.++++.|.||.+.|++++.+|-+..+ +|.|++||+||++..+|...+.....
T Consensus 87 l~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~----------------------- 143 (311)
T KOG1446|consen 87 LHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGR----------------------- 143 (311)
T ss_pred eecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCC-----------------------
Confidence 99999999999999999999999987776 56699999999998888766653211
Q ss_pred ccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCC--eeeEEeeCCCCcccCCCcceEEEeeCCCcc
Q 000316 1438 NSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG--QKLHLWRGEPTELGFPSLVSAICACGSEKM 1515 (1678)
Q Consensus 1438 ~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg--~~l~~l~~~~~~v~~~~~V~sva~~~~~~~ 1515 (1678)
...|+.|+|-.+|++...+.|++||+|.- .+-.++..... -....+.+.|+
T Consensus 144 -------------------pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~---~~~ew~~l~FS----- 196 (311)
T KOG1446|consen 144 -------------------PIAAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDN---DEAEWTDLEFS----- 196 (311)
T ss_pred -------------------cceeECCCCcEEEEecCCCeEEEEEecccCCCCceeEccCCC---CccceeeeEEc-----
Confidence 12345566989999988889999999863 33344432211 12234445443
Q ss_pred ccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCe--E-EEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCe
Q 000316 1516 QAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYV--T-KLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPT 1591 (1678)
Q Consensus 1516 s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V--~-sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~ 1591 (1678)
++|+.++.+...+.+++.|.-+|..+.++.++...- . +.. .||++++++|+.||+|.+|+++++ ..+.
T Consensus 197 ------~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg--~~v~ 268 (311)
T KOG1446|consen 197 ------PDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETG--KKVA 268 (311)
T ss_pred ------CCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCC--cEee
Confidence 566799999999999999999999999998776432 2 223 899999999999999999999998 6667
Q ss_pred Eeec-CCCCEEEEEecCCEEEEEeCCC-eEEEec
Q 000316 1592 VFKG-HTNGISGFSVWGQDVISISNNK-IGLSSL 1623 (1678)
Q Consensus 1592 ~l~g-H~~~V~afSpdg~~LaSgs~D~-I~vwdl 1623 (1678)
.+++ +..++.++..+-++...++.+. +.+|-.
T Consensus 269 ~~~~~~~~~~~~~~fnP~~~mf~sa~s~l~fw~p 302 (311)
T KOG1446|consen 269 VLRGPNGGPVSCVRFNPRYAMFVSASSNLVFWLP 302 (311)
T ss_pred EecCCCCCCccccccCCceeeeeecCceEEEEec
Confidence 7777 6777776444444444444445 777753
No 438
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.90 E-value=2e-23 Score=248.11 Aligned_cols=199 Identities=16% Similarity=0.152 Sum_probs=155.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCC--------CccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLS--------GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL 232 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~--------~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l 232 (1678)
.++|++.++||+|+||.||+|++.-.. ........||+|.+... ........+. +|+++|+.+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~--------~ei~~l~~l 74 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRAD-VTKTARNDFL--------KEIKIMSRL 74 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCC-CCHHHHHHHH--------HHHHHHHhC
Confidence 357999999999999999999853100 00112346899998753 2222333344 899999999
Q ss_pred CCCcccceeeEEEeCCeEEEeccCCCC-CHHHHHhhCC----------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecC
Q 000316 233 RHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSP----------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRS 301 (1678)
Q Consensus 233 ~HpNIV~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~----------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRD 301 (1678)
+||||+++++++...+..++||||+++ +|.+++.... ...++...+..++.|++.||.|||++|++|||
T Consensus 75 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~d 154 (295)
T cd05097 75 KNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRD 154 (295)
T ss_pred CCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccc
Confidence 999999999999999999999999995 9999986321 12367788899999999999999999999999
Q ss_pred CCCCCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 302 VCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 302 LKP~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||+|||++.++ .+||+|||+++........ .......++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 155 lkp~Nill~~~~--~~kl~dfg~~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l 221 (295)
T cd05097 155 LATRNCLVGNHY--TIKIADFGMSRNLYSGDYY---------RIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTL 221 (295)
T ss_pred cChhhEEEcCCC--cEEecccccccccccCcce---------eccCcCcCceeecChhhhccCCcCchhhHHHHHHHH
Confidence 999999999988 8999999999854321100 011122346789999999888899999999999664
No 439
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.89 E-value=4.1e-23 Score=243.51 Aligned_cols=197 Identities=15% Similarity=0.101 Sum_probs=156.5
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|...++||+|+||.||++..... ....++..+|+|.+... .......+. +|+++++.++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~~~~~~~~k~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 72 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNL-LPEQDKMLVAVKALKEA--SESARQDFQ--------REAELLTVLQHQHIVRF 72 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecC-CCCCCceEEEEEecCcC--CHHHHHHHH--------HHHHHHhcCCCCCCceE
Confidence 35788999999999999999974321 12245678999987642 233333444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCC
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPN-------------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSN 306 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~-------------~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~N 306 (1678)
++++.+.+..++||||++ ++|.+++..... ..+++..++.++.||+.||+|||++||+||||||+|
T Consensus 73 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~n 152 (280)
T cd05092 73 YGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRN 152 (280)
T ss_pred EEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhh
Confidence 999999999999999998 599999974321 347889999999999999999999999999999999
Q ss_pred eEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 307 VLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 307 ILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
||+++++ .+||+|||+++......... ......+++.|+|||.+.+..++.++|+|+.|+|.
T Consensus 153 il~~~~~--~~kL~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 214 (280)
T cd05092 153 CLVGQGL--VVKIGDFGMSRDIYSTDYYR---------VGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVL 214 (280)
T ss_pred EEEcCCC--CEEECCCCceeEcCCCceee---------cCCCccccccccCHHHhccCCcCchhhHHHHHHHH
Confidence 9999988 89999999997543211000 01112246789999999999999999999999554
No 440
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.89 E-value=4.6e-23 Score=240.93 Aligned_cols=195 Identities=15% Similarity=0.151 Sum_probs=156.1
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
.+|+..+.||+|+||.||+|+... .......+|+|.+.... ......++. +|+++++.++||||++++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~---~~~~~~~~~ik~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 72 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKM---PGRKEVAVAIKTLKPGY-TEKQRQDFL--------SEASIMGQFSHHNIIRLE 72 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEec---CCCCceEEEEEeccccC-CHHHHHHHH--------HHHHHHhcCCCCCeeEEE
Confidence 468899999999999999999642 11234589999986532 222333444 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++.+.+..|+||||+++ +|.+++.. ....++...+..++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 73 ~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~--~~kl~ 149 (268)
T cd05063 73 GVVTKFKPAMIITEYMENGALDKYLRD-HDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNL--ECKVS 149 (268)
T ss_pred EEEccCCCcEEEEEcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCC--cEEEC
Confidence 999999999999999995 99999873 345689999999999999999999999999999999999999988 89999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||+++.......... .......+..|+|||++....++.+.|+|+.|.+.
T Consensus 150 dfg~~~~~~~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il 200 (268)
T cd05063 150 DFGLSRVLEDDPEGTY--------TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVM 200 (268)
T ss_pred CCccceecccccccce--------eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHH
Confidence 9999985442111000 00111234579999999888899999999999553
No 441
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.89 E-value=5.3e-23 Score=244.56 Aligned_cols=281 Identities=21% Similarity=0.292 Sum_probs=210.6
Q ss_pred ccccEE---EEEEe-cCCCEEEEEecCCCCCCeEEEEeCCC--C----eEEEEEecCCccEEEEeecCCCCcE--EeCCC
Q 000316 1326 HHGALR---SVAVG-QDECTVFTAGIGPGFKGTVQKWELTR--I----NCVSGYYGHEEVVNDICVLSSSGRI--ASCDG 1393 (1678)
Q Consensus 1326 H~~~V~---svafs-pdg~~LaSgS~d~~~DgtVrlWDl~t--g----~~l~~l~gH~~~V~sV~fs~~~~~l--aS~Dg 1393 (1678)
|...|. .+..+ |++++|+|||. ||.|++|+... + .++..++.|.++|+++....++..+ +|+|-
T Consensus 20 n~~~v~~~~~Lq~da~~~ryLfTgGR----Dg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDt 95 (735)
T KOG0308|consen 20 NRNGVNITKALQLDAPNGRYLFTGGR----DGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDT 95 (735)
T ss_pred ccccccchhhccccCCCCceEEecCC----CceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCc
Confidence 444555 44444 45678999998 99999999753 2 2577889999999999987777666 67799
Q ss_pred cEEEEECCCC--ceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEe-ecCCCEEEE
Q 000316 1394 TLHVWNSQTG--KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHH-IECVERLVV 1470 (1678)
Q Consensus 1394 tVrIWD~~tg--~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~-sp~g~~Las 1470 (1678)
||++|+...+ -|..++..| .++|.|+++ .++...+|+
T Consensus 96 TVK~W~~~~~~~~c~stir~H----------------------------------------~DYVkcla~~ak~~~lvaS 135 (735)
T KOG0308|consen 96 TVKVWNAHKDNTFCMSTIRTH----------------------------------------KDYVKCLAYIAKNNELVAS 135 (735)
T ss_pred eEEEeecccCcchhHhhhhcc----------------------------------------cchheeeeecccCceeEEe
Confidence 9999998866 344444433 345777777 667889999
Q ss_pred EECCCcEEEEECCCC--eeeEEeeCCCC---cccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCc
Q 000316 1471 GIGNGSLRFIDINQG--QKLHLWRGEPT---ELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN 1545 (1678)
Q Consensus 1471 gs~DgtVrlWDl~tg--~~l~~l~~~~~---~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~ 1545 (1678)
|+-|+.|.+||+.+| +.+.++...+. ..+....|.+++.. +.|..+++|+..+.+++||.++++
T Consensus 136 gGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N-----------~t~t~ivsGgtek~lr~wDprt~~ 204 (735)
T KOG0308|consen 136 GGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMN-----------QTGTIIVSGGTEKDLRLWDPRTCK 204 (735)
T ss_pred cCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecC-----------CcceEEEecCcccceEEecccccc
Confidence 999999999999988 44544432221 11445566666653 455689999999999999999999
Q ss_pred EEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEE--EEecCCEEEEEeCCC-eEEE
Q 000316 1546 VIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLS 1621 (1678)
Q Consensus 1546 ~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vw 1621 (1678)
.+..++||..-|..+. ..||+.++|+|.||+|++||+... +++.++..|+++|++ .+++-..+.+|+.|+ |..-
T Consensus 205 kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQ--rCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~T 282 (735)
T KOG0308|consen 205 KIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQ--RCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRT 282 (735)
T ss_pred ceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeecccc--ceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEec
Confidence 9999999999999999 999999999999999999999877 788899999999997 566678899999999 9999
Q ss_pred ecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1622 SLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1622 dl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
|+.... ..+-+.. ...+|..+..+.+..-+=+++.|+.|+-|
T Consensus 283 dl~n~~--------~~tlick------~daPv~~l~~~~~~~~~WvtTtds~I~rW 324 (735)
T KOG0308|consen 283 DLRNPA--------KSTLICK------EDAPVLKLHLHEHDNSVWVTTTDSSIKRW 324 (735)
T ss_pred ccCCch--------hheEeec------CCCchhhhhhccccCCceeeeccccceec
Confidence 986321 1111211 22344444444333333456667777666
No 442
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.89 E-value=6.2e-22 Score=226.28 Aligned_cols=277 Identities=16% Similarity=0.246 Sum_probs=216.6
Q ss_pred ccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCce
Q 000316 1328 GALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKL 1405 (1678)
Q Consensus 1328 ~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~ 1405 (1678)
-.+.++...+....++|||. |+++.++|..+++.+.+|+||...|+++.|+++...+ +|.|..|+||......+
T Consensus 220 pgi~ald~~~s~~~ilTGG~----d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~ 295 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGE----DKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSE 295 (506)
T ss_pred CCeeEEeecCCCCcceecCC----CCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccC
Confidence 45777888887778999998 8999999999999999999999999999999987776 77799999999876554
Q ss_pred eEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCC
Q 000316 1406 LSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG 1485 (1678)
Q Consensus 1406 ~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg 1485 (1678)
......| ...|+.+..+|+|.++++++.|++.-+.|+++|
T Consensus 296 ~~~~~~h----------------------------------------~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g 335 (506)
T KOG0289|consen 296 PTSSRPH----------------------------------------EEPVTGLSLHPTGEYLLSASNDGTWAFSDISSG 335 (506)
T ss_pred ccccccc----------------------------------------cccceeeeeccCCcEEEEecCCceEEEEEccCC
Confidence 3333322 123566667778999999999999999999999
Q ss_pred eeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCC
Q 000316 1486 QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APE 1564 (1678)
Q Consensus 1486 ~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spd 1564 (1678)
..+.........+ .+++.+|. |||.++++|+.||.|++||+.++..+..|.+|+++|..|+ +.|
T Consensus 336 ~~lt~vs~~~s~v----~~ts~~fH-----------pDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsEN 400 (506)
T KOG0289|consen 336 SQLTVVSDETSDV----EYTSAAFH-----------PDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSEN 400 (506)
T ss_pred cEEEEEeeccccc----eeEEeeEc-----------CCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccC
Confidence 9887665432222 24555553 5568999999999999999999999999999999999999 889
Q ss_pred CCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE--EEEecCCEEEEEeCCC-eEEEecCCCCCCCCcceeccceee
Q 000316 1565 DHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLY 1641 (1678)
Q Consensus 1565 g~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~ 1641 (1678)
|-+||+++.|+.|++||+|...--+.+.+.... .|. +|...|++|+.++.|- |++++- ..+-|
T Consensus 401 GY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~-~v~s~~fD~SGt~L~~~g~~l~Vy~~~k-------------~~k~W 466 (506)
T KOG0289|consen 401 GYWLATAADDGSVKLWDLRKLKNFKTIQLDEKK-EVNSLSFDQSGTYLGIAGSDLQVYICKK-------------KTKSW 466 (506)
T ss_pred ceEEEEEecCCeEEEEEehhhcccceeeccccc-cceeEEEcCCCCeEEeecceeEEEEEec-------------ccccc
Confidence 999999999999999999986322222332222 455 4777799999985544 555441 12233
Q ss_pred eeecC-CCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1642 MVDNG-AKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1642 ~~~~g-~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
..... ..|.+..+.+.|..+.+++++||.|..++++
T Consensus 467 ~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~ 503 (506)
T KOG0289|consen 467 TEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLY 503 (506)
T ss_pred eeeehhhhcccccceeeecccceEEeeccchhheEEe
Confidence 33221 2466788999999999999999999999886
No 443
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.89 E-value=5e-22 Score=219.87 Aligned_cols=239 Identities=16% Similarity=0.227 Sum_probs=199.0
Q ss_pred cccCCCCceEeecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCC--EEEEEecCCCCCCe
Q 000316 1278 NLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDEC--TVFTAGIGPGFKGT 1354 (1678)
Q Consensus 1278 ~l~gH~~~V~~fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~--~LaSgS~d~~~Dgt 1354 (1678)
....|++.+.++..+|.| +||||.|.+|+|||+. ...+..+-.|.+.|+++.|.++-. .|+||+. ||.
T Consensus 38 ~~~aH~~sitavAVs~~~-----~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sd----DG~ 108 (362)
T KOG0294|consen 38 AFSAHAGSITALAVSGPY-----VASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSD----DGH 108 (362)
T ss_pred cccccccceeEEEeccee-----EeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecC----CCc
Confidence 456799999999989998 9999999999999998 567888889999999999999875 8999997 999
Q ss_pred EEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccc
Q 000316 1355 VQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTD 1432 (1678)
Q Consensus 1355 VrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~ 1432 (1678)
|.+|+..+.+++.++++|.+.|+.|+.+|.+..- +++|++++.||+-+|+.-..++-.
T Consensus 109 i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~-------------------- 168 (362)
T KOG0294|consen 109 IIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLK-------------------- 168 (362)
T ss_pred EEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccC--------------------
Confidence 9999999999999999999999999999988765 677999999999988765444321
Q ss_pred cccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCC
Q 000316 1433 QVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGS 1512 (1678)
Q Consensus 1433 ~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~ 1512 (1678)
+..+.+.|+|.|.+++.++.+ .|-+|-+.+......+. .+..+.|+.|
T Consensus 169 ---------------------~~at~v~w~~~Gd~F~v~~~~-~i~i~q~d~A~v~~~i~-------~~~r~l~~~~--- 216 (362)
T KOG0294|consen 169 ---------------------NKATLVSWSPQGDHFVVSGRN-KIDIYQLDNASVFREIE-------NPKRILCATF--- 216 (362)
T ss_pred ---------------------CcceeeEEcCCCCEEEEEecc-EEEEEecccHhHhhhhh-------ccccceeeee---
Confidence 112346677789999888764 58889887665543333 2223444443
Q ss_pred CccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE---cCCCCEEEEEeCCCcEEEEEcCCCC
Q 000316 1513 EKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA---APEDHLLVSSSLDKTLRIWDLRRNW 1586 (1678)
Q Consensus 1513 ~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva---spdg~~LaSgS~DgtI~IWDl~~~~ 1586 (1678)
.+++.+++|.+|+.|++||..++.+...+.+|...|-++. .|++.+|+|+|.||.|+|||++...
T Consensus 217 ---------l~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~~ 284 (362)
T KOG0294|consen 217 ---------LDGSELLVGGDNEWISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDMET 284 (362)
T ss_pred ---------cCCceEEEecCCceEEEeccCCCccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEccccc
Confidence 3567999999999999999999999999999999999988 5777899999999999999998763
No 444
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.89 E-value=8.7e-23 Score=219.82 Aligned_cols=223 Identities=19% Similarity=0.280 Sum_probs=182.3
Q ss_pred EEEEeCCCCEEEEeCC--CceeEEeccccccEEEEEEecCC-CEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEE
Q 000316 1301 LGRVGGLKDESPWKIK--ASILSSIRAHHGALRSVAVGQDE-CTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVN 1377 (1678)
Q Consensus 1301 LasgS~D~~v~lWd~~--~~~l~tl~gH~~~V~svafspdg-~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~ 1377 (1678)
++++++||+++|||.. ...++.++.|...|.++.|++-. +.++++| +|+||++||...++.++++.||..-|+
T Consensus 76 ~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsS----WD~TiKLW~~~r~~Sv~Tf~gh~~~Iy 151 (311)
T KOG0277|consen 76 VIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSS----WDGTIKLWDPNRPNSVQTFNGHNSCIY 151 (311)
T ss_pred EEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeec----cCCceEeecCCCCcceEeecCCccEEE
Confidence 8999999999999976 66899999999999999999864 5566665 699999999999999999999999999
Q ss_pred EEeecCCCCcE---EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCC
Q 000316 1378 DICVLSSSGRI---ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGN 1454 (1678)
Q Consensus 1378 sV~fs~~~~~l---aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~ 1454 (1678)
..+|+|....+ +|+|+++++||++.......+..| ..+++++.|+..
T Consensus 152 ~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah------------------------------~~Eil~cdw~ky 201 (311)
T KOG0277|consen 152 QAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAH------------------------------NSEILCCDWSKY 201 (311)
T ss_pred EEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEec------------------------------cceeEeeccccc
Confidence 99999976665 566999999999753222224332 345666666653
Q ss_pred ceeEeEeecCCCEEEEEECCCcEEEEECCCC-eeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecC
Q 000316 1455 LYTCLHHIECVERLVVGIGNGSLRFIDINQG-QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSS 1533 (1678)
Q Consensus 1455 ~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg-~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~D 1533 (1678)
+.+.+++|+.|+.||.||++.- .++..+.+ |.-.|+.|.++|... +.||+++.|
T Consensus 202 ---------~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~g------h~~AVRkvk~Sph~~----------~lLaSasYD 256 (311)
T KOG0277|consen 202 ---------NHNVLATGGVDNLVRGWDIRNLRTPLFELNG------HGLAVRKVKFSPHHA----------SLLASASYD 256 (311)
T ss_pred ---------CCcEEEecCCCceEEEEehhhccccceeecC------CceEEEEEecCcchh----------hHhhhcccc
Confidence 4678999999999999999975 45666654 445689999987554 689999999
Q ss_pred CeEEEEeCCCC-cEEEEEeccCCCeEEEE-cC-CCCEEEEEeCCCcEEEEEc
Q 000316 1534 GQCRLFDVRSG-NVIASWRAHDGYVTKLA-AP-EDHLLVSSSLDKTLRIWDL 1582 (1678)
Q Consensus 1534 g~I~lWD~~tg-~~i~~l~gH~~~V~sva-sp-dg~~LaSgS~DgtI~IWDl 1582 (1678)
-++||||...+ ..+.+..-|++-|..+. ++ ++..+|+++.|+.++||+.
T Consensus 257 mT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 257 MTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred ceEEecccccchhhhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence 99999999854 46677778999999998 33 6679999999999999984
No 445
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.89 E-value=4.6e-23 Score=239.22 Aligned_cols=184 Identities=18% Similarity=0.160 Sum_probs=155.8
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.. .+..+|+|.+..... ...++. +|+.+++.++|+||+++
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~--------~~~~v~iK~~~~~~~---~~~~~~--------~e~~~l~~l~~~~i~~~ 65 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY--------RGQKVAVKCLKDDST---AAQAFL--------AEASVMTTLRHPNLVQL 65 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe--------cCcEEEEEEeccchh---HHHHHH--------HHHHHHHhcCCcceeee
Confidence 46799999999999999999984 367899999875422 233444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+.+..++||||++ ++|.++++......+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 66 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~--~~~l 143 (256)
T cd05039 66 LGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDL--VAKV 143 (256)
T ss_pred EEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCC--CEEE
Confidence 999999999999999999 5999999854444789999999999999999999999999999999999999999 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||.++....... ....+..|+|||.+....++.++|+|+.|.+.
T Consensus 144 ~d~g~~~~~~~~~~--------------~~~~~~~~~ape~~~~~~~~~~~Di~slG~il 189 (256)
T cd05039 144 SDFGLAKEASQGQD--------------SGKLPVKWTAPEALREKKFSTKSDVWSFGILL 189 (256)
T ss_pred cccccccccccccc--------------cCCCcccccCchhhcCCcCCcHHHHHHHHHHH
Confidence 99999986431100 01134579999999888899999999999664
No 446
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.89 E-value=3.8e-23 Score=241.54 Aligned_cols=186 Identities=16% Similarity=0.157 Sum_probs=144.1
Q ss_pred eeeeeeCcEEEEEEEecCCC------CccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 168 AFIGICSYSIFEELASNFLS------GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~------~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
+.||+|+||.||+|+..... ........+++|.+.... ......+. +|+.+++.++||||++++
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~--------~~~~~l~~l~hp~iv~~~ 70 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFF--------ETASMMRQVSHKHIVLLY 70 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHH--------HHHHHHHhCCCCCEeeEE
Confidence 46899999999999843100 011234468888875421 22222333 889999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc-----e
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-----S 315 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~-----~ 315 (1678)
+++..+...++||||+++ +|..++.. ....+++..+..++.||+.||+|||++||+||||||+|||++.++. .
T Consensus 71 ~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~ 149 (262)
T cd05077 71 GVCVRDVENIMVEEFVEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGP 149 (262)
T ss_pred EEEecCCCCEEEEecccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCc
Confidence 999999999999999995 88877763 3456899999999999999999999999999999999999987651 1
Q ss_pred eEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc-cccccccccccccCccc
Q 000316 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 316 ~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~y~~~~d~W~~G~is 379 (1678)
.+|++|||++..... ...+.++..|+|||.+. +..++.++|+|+.|.+.
T Consensus 150 ~~~l~d~g~~~~~~~---------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l 199 (262)
T cd05077 150 FIKLSDPGIPITVLS---------------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTL 199 (262)
T ss_pred eeEeCCCCCCccccC---------------cccccccccccChhhhcCCCCCCchhHHHHHHHHH
Confidence 389999999874321 11234677899999876 56789999999999654
No 447
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.89 E-value=4.5e-23 Score=241.95 Aligned_cols=196 Identities=16% Similarity=0.113 Sum_probs=156.8
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++++.||+|+||.||+|+.+... .......+++|.+.... .......+. +|+++++.++||||++++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~~~~~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~~ 74 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIE-EEGGETLVLVKALQKTK-DENLQSEFR--------RELDMFRKLSHKNVVRLL 74 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCC-cCCCcceEEEEccCCcc-chHHHHHHH--------HHHHHHHhcCCcceeeeE
Confidence 57999999999999999999965321 22356789999886532 221233444 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCC-CCHHHHHhhCCC-------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC
Q 000316 242 GLLKTSGLITSVIPKTP-YTLENILQFSPN-------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~-------~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g 313 (1678)
+++.+.+..++||||++ |+|.+++..... ..+++..+..++.||+.||.|||++||+||||||+|||++.++
T Consensus 75 ~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~ 154 (275)
T cd05046 75 GLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQR 154 (275)
T ss_pred EEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCC
Confidence 99999899999999999 599999984331 1589999999999999999999999999999999999999998
Q ss_pred ceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
.+||+|||+++........ . .....++..|+|||.+.+..++.+.|+|+.|.+.
T Consensus 155 --~~~l~~~~~~~~~~~~~~~----~------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l 208 (275)
T cd05046 155 --EVKVSLLSLSKDVYNSEYY----K------LRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLM 208 (275)
T ss_pred --cEEEcccccccccCccccc----c------cCCceeEEeecChhhhccCCCCchhhHHHHHHHH
Confidence 8999999998753311100 0 0111246679999999888889999999999553
No 448
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.89 E-value=5.9e-23 Score=237.81 Aligned_cols=189 Identities=20% Similarity=0.144 Sum_probs=153.8
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeC
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~ 247 (1678)
+.||+|+||.||+|.+... ...+..+|+|.+....... ....+. +|+++++.++|+||+++++++.+.
T Consensus 1 ~~ig~g~~g~v~~~~~~~~---~~~~~~~~ik~~~~~~~~~-~~~~~~--------~e~~~l~~~~~~~i~~~~~~~~~~ 68 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGK---DGKTTEVAVKTLKEDASEE-ERKDFL--------KEARVMKKLGHPNVVRLLGVCTEE 68 (262)
T ss_pred CccccCCceEEEEEEEecC---CCCCceEEeEeeccccchh-HHHHHH--------HHHHHHhhcCCCChheeeeeecCC
Confidence 4799999999999996421 1237889999987643322 233333 899999999999999999999999
Q ss_pred CeEEEeccCCC-CCHHHHHhhCC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 248 GLITSVIPKTP-YTLENILQFSP-------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 248 ~~~~lVmEy~~-g~L~~~l~~~~-------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
..+++||||++ ++|.+++.... ...+++..+..++.|++.||+|||++||+||||||+||+++.++ .+||
T Consensus 69 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~--~~~l 146 (262)
T cd00192 69 EPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDL--VVKI 146 (262)
T ss_pred CceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCC--cEEE
Confidence 99999999997 59999998431 36789999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||.++......... ......++..|+|||.+....++.++|+|+.|.+.
T Consensus 147 ~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 197 (262)
T cd00192 147 SDFGLSRDVYDDDYYR---------KKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLL 197 (262)
T ss_pred cccccccccccccccc---------cccCCCcCccccCHHHhccCCcchhhccHHHHHHH
Confidence 9999998654221100 01122357789999999888999999999999654
No 449
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.89 E-value=1.4e-23 Score=246.78 Aligned_cols=196 Identities=14% Similarity=0.143 Sum_probs=159.5
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
+.|+..+.||+|+||.||+|.+. .++..||+|.+..... ......+. +|+.+++.++||||++++
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~------~~~~~vaiK~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 68 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDN------RTKEVVAIKIIDLEEA-EDEIEDIQ--------QEITVLSQCDSPYITRYY 68 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEc------CCCeEEEEEEeccccc-hHHHHHHH--------HHHHHHHcCCCCccHhhh
Confidence 45788899999999999999864 4678899999865322 22223333 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++..++..|+||||+++ +|.+++. ...+++..++.++.|++.||.|||++||+|+||||+||+++.++ .+||+
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~--~~~l~ 143 (277)
T cd06642 69 GSYLKGTKLWIIMEYLGGGSALDLLK---PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQG--DVKLA 143 (277)
T ss_pred cccccCCceEEEEEccCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCC--CEEEc
Confidence 999999999999999995 9998886 34678999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCCC
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs~ 395 (1678)
|||+++....... ......++..|+|||.+.+..++.++|+|+.|.+. +..+.|+..
T Consensus 144 dfg~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il-------~el~tg~~p 200 (277)
T cd06642 144 DFGVAGQLTDTQI-----------KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITA-------IELAKGEPP 200 (277)
T ss_pred cccccccccCcch-----------hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHH-------HHHHhCCCC
Confidence 9999975432110 01112367889999999998999999999999554 334456653
No 450
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.89 E-value=4.5e-22 Score=238.58 Aligned_cols=271 Identities=18% Similarity=0.279 Sum_probs=213.4
Q ss_pred ccccCCCCceEe-ecCCCCCCCCCeEEEEeCCCCEEEEeCCCc---eeEEeccccccEEE-EEEec-CCCEEEEEecCCC
Q 000316 1277 SNLMKCEPWFWF-PTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRS-VAVGQ-DECTVFTAGIGPG 1350 (1678)
Q Consensus 1277 ~~l~gH~~~V~~-fSpdg~~~~~~~LasgS~D~~v~lWd~~~~---~l~tl~gH~~~V~s-vafsp-dg~~LaSgS~d~~ 1350 (1678)
-.+.||..=|.. ...++.+ ++++|.|+++++|+-.+. ....+.+|.+-|.+ +++-+ ++-.+++|++
T Consensus 8 ~~l~gH~~DVr~v~~~~~~~-----i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~--- 79 (745)
T KOG0301|consen 8 HELEGHKSDVRAVAVTDGVC-----IISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGM--- 79 (745)
T ss_pred EEeccCccchheeEecCCeE-----EeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecc---
Confidence 356678766654 2233445 999999999999997644 33568899998888 88886 4446999998
Q ss_pred CCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE-EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCcccc
Q 000316 1351 FKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKI 1429 (1678)
Q Consensus 1351 ~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l-aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~ 1429 (1678)
|.+|.+|.+....++.+++||+..|.+++...++..+ +|.|.|+++|-. +++...+.+|
T Consensus 80 -D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~~iSgSWD~TakvW~~--~~l~~~l~gH----------------- 139 (745)
T KOG0301|consen 80 -DTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGTLISGSWDSTAKVWRI--GELVYSLQGH----------------- 139 (745)
T ss_pred -cceEEEEecCCCCchhhhhccccceeeeecCCcCceEecccccceEEecc--hhhhcccCCc-----------------
Confidence 9999999999999999999999999999976666645 777999999974 5665555554
Q ss_pred ccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEe
Q 000316 1430 NTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICA 1509 (1678)
Q Consensus 1430 ~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~ 1509 (1678)
...|+++.+-+ ++ .++|||.|.+||+|.- ++.+++|.+|. +.|+.+++
T Consensus 140 -------------~asVWAv~~l~----------e~-~~vTgsaDKtIklWk~--~~~l~tf~gHt------D~VRgL~v 187 (745)
T KOG0301|consen 140 -------------TASVWAVASLP----------EN-TYVTGSADKTIKLWKG--GTLLKTFSGHT------DCVRGLAV 187 (745)
T ss_pred -------------chheeeeeecC----------CC-cEEeccCcceeeeccC--Cchhhhhccch------hheeeeEE
Confidence 33455554443 34 8999999999999985 78888898754 45888887
Q ss_pred eCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCC
Q 000316 1510 CGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPS 1588 (1678)
Q Consensus 1510 ~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~ 1588 (1678)
- ++..+++++.||.|++||+ +|+++....||+..|.+++ ..+++.++|+|.|++++||+.. .
T Consensus 188 l------------~~~~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~----e 250 (745)
T KOG0301|consen 188 L------------DDSHFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD----E 250 (745)
T ss_pred e------------cCCCeEeecCCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC----c
Confidence 4 2346899999999999999 8999999999999999999 8888999999999999999876 4
Q ss_pred CCeEeecCCCCEEEEE-ecCCEEEEEeCCC-eEEEecC
Q 000316 1589 QPTVFKGHTNGISGFS-VWGQDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1589 ~~~~l~gH~~~V~afS-pdg~~LaSgs~D~-I~vwdl~ 1624 (1678)
+.+.+.-.+-.|++.. .....+++|+.|| ||||..+
T Consensus 251 ~~q~I~lPttsiWsa~~L~NgDIvvg~SDG~VrVfT~~ 288 (745)
T KOG0301|consen 251 CVQVITLPTTSIWSAKVLLNGDIVVGGSDGRVRVFTVD 288 (745)
T ss_pred eEEEEecCccceEEEEEeeCCCEEEeccCceEEEEEec
Confidence 4556665666777532 2244567777777 9999976
No 451
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.89 E-value=5e-23 Score=243.54 Aligned_cols=198 Identities=17% Similarity=0.154 Sum_probs=156.9
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.+... ....++..+|+|.+... .......++. +|+.+++.++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~~~~~~aiK~~~~~-~~~~~~~~~~--------~ei~~l~~l~h~~iv~~ 73 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGL-LPYEPFTMVAVKMLKEE-ASADMQADFQ--------REAALMAEFDHPNIVKL 73 (288)
T ss_pred hHhceecccccccccccEEEEEEccc-CCCCcceeEEEEecCCC-cCHHHHHHHH--------HHHHHHHhcCCCchheE
Confidence 45799999999999999999986421 11235678999998653 2233334444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcee
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSP--------------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAH 299 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~--------------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiH 299 (1678)
++++..+...++||||++ |+|.+++.... ...+++..+..++.|++.||.|||++|++|
T Consensus 74 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H 153 (288)
T cd05050 74 LGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVH 153 (288)
T ss_pred EEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 999999999999999999 49999997321 124678888999999999999999999999
Q ss_pred cCCCCCCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 300 RSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 300 RDLKP~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||||+|||++.++ .+||+|||+++......... .......+..|+|||.+.+..++.++|+|+.|++.
T Consensus 154 ~dl~p~nil~~~~~--~~~l~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 222 (288)
T cd05050 154 RDLATRNCLVGENM--VVKIADFGLSRNIYSADYYK---------ASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVL 222 (288)
T ss_pred ccccHhheEecCCC--ceEECccccceecccCcccc---------ccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHH
Confidence 99999999999999 89999999987533111000 00111235679999999888999999999999665
No 452
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.89 E-value=8.1e-23 Score=237.17 Aligned_cols=189 Identities=17% Similarity=0.124 Sum_probs=152.1
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeC
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~ 247 (1678)
+.||+|+||.||+|.+.. .......+|+|.+...... .....+. +|+.+++.++||||+++++.+..
T Consensus 1 ~~ig~g~~~~v~~~~~~~---~~~~~~~vaiK~~~~~~~~-~~~~~~~--------~e~~~l~~l~h~~iv~~~~~~~~- 67 (257)
T cd05040 1 KKLGDGSFGVVRRGEWST---SGGKVIPVAVKCLKSDKLS-DIMDDFL--------KEAAIMHSLDHENLIRLYGVVLT- 67 (257)
T ss_pred CcCCccCcccEEeeeEec---CCCCceEEEEeecCCcccH-HHHHHHH--------HHHHHHhhcCCCCccceeEEEcC-
Confidence 468999999999998642 1123457999999765433 3333444 89999999999999999999988
Q ss_pred CeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCcc
Q 000316 248 GLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1678)
Q Consensus 248 ~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~ 326 (1678)
...++||||++ ++|.+++.......+++..+..++.|++.||.|||++|++||||||+||+++.++ .+||+|||+++
T Consensus 68 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~--~~kl~dfg~~~ 145 (257)
T cd05040 68 HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDD--KVKIGDFGLMR 145 (257)
T ss_pred CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCC--EEEeccccccc
Confidence 88999999998 5999999854335688999999999999999999999999999999999999998 89999999998
Q ss_pred cCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 327 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
........... .....++..|+|||.+.+..++.++|+|+.|++.
T Consensus 146 ~~~~~~~~~~~--------~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l 190 (257)
T cd05040 146 ALPQNEDHYVM--------EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTL 190 (257)
T ss_pred cccccccceec--------ccCCCCCceecCHHHhcccCcCchhhhHHHHHHH
Confidence 65421111000 1112356789999999999999999999999554
No 453
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.89 E-value=4.5e-23 Score=242.58 Aligned_cols=185 Identities=16% Similarity=0.108 Sum_probs=143.4
Q ss_pred eeeeeCcEEEEEEEecCCCC------------------ccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhc
Q 000316 169 FIGICSYSIFEELASNFLSG------------------CLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG 230 (1678)
Q Consensus 169 ~IG~G~fG~Vy~a~~~~~~~------------------~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~ 230 (1678)
+||+|+||.||+|......+ .......||+|.+.... ......+. +|+.+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~--------~~~~~~~ 71 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH--RDIALAFF--------ETASLMS 71 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH--HHHHHHHH--------HHHHHHh
Confidence 69999999999987432110 11223568999886431 12223333 8899999
Q ss_pred cCCCCcccceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEe
Q 000316 231 CLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309 (1678)
Q Consensus 231 ~l~HpNIV~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl 309 (1678)
.++||||+++++++.++...++||||+++ +|..++.. ..+.+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus 72 ~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill 150 (274)
T cd05076 72 QVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILL 150 (274)
T ss_pred cCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEE
Confidence 99999999999999999999999999995 89888873 34568899999999999999999999999999999999999
Q ss_pred cCCCc-----eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccccc-ccccccccccccCccc
Q 000316 310 TDSCW-----SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELS 379 (1678)
Q Consensus 310 ~~~g~-----~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~y~~~~d~W~~G~is 379 (1678)
+..+. ..+|++|||+++..... ....++..|+|||.+.+ ..++.++|+|+.|.+.
T Consensus 151 ~~~~~~~~~~~~~kl~d~g~~~~~~~~---------------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l 211 (274)
T cd05076 151 ARLGLAEGTSPFIKLSDPGVSFTALSR---------------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTL 211 (274)
T ss_pred eccCcccCccceeeecCCccccccccc---------------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHH
Confidence 86431 24899999998643211 01125678999998865 5689999999999654
No 454
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.89 E-value=5e-23 Score=242.39 Aligned_cols=197 Identities=16% Similarity=0.100 Sum_probs=155.6
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.+... ....+..|++|.+... ........+. +|+.+|+.++||||+++
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~--~~~~~~~v~~k~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~ni~~~ 73 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDE--KPGKEEEVFVKTVKDH-ASEIQVTLLL--------QESCLLYGLSHQNILPI 73 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecC--CCCceeEEEEEEccCC-CCHHHHHHHH--------HHHHHHHhCCCCCCCeE
Confidence 46899999999999999999996420 1123678999998643 2333333344 89999999999999999
Q ss_pred eeEEEe-CCeEEEeccCCC-CCHHHHHhhCCC------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCC
Q 000316 241 LGLLKT-SGLITSVIPKTP-YTLENILQFSPN------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1678)
Q Consensus 241 ~~~~~~-~~~~~lVmEy~~-g~L~~~l~~~~~------~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 312 (1678)
++++.. +...++++||++ ++|.+++..... ..+++..+..++.|++.||+|||+++|+||||||+||+++.+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~ 153 (280)
T cd05043 74 LHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEE 153 (280)
T ss_pred EEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCC
Confidence 998765 567899999998 599999874322 458899999999999999999999999999999999999999
Q ss_pred CceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 313 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 313 g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+ .+||+|||+++.......... .....++..|+|||.+.+..++.++|+|+.|++.
T Consensus 154 ~--~~kl~d~g~~~~~~~~~~~~~---------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l 209 (280)
T cd05043 154 L--QVKITDNALSRDLFPMDYHCL---------GDNENRPVKWMALESLVNKEYSSASDVWSFGVLL 209 (280)
T ss_pred C--cEEECCCCCcccccCCceEEe---------CCCCCcchhccCHHHHhcCCCCchhhHHHhHHHH
Confidence 8 899999999985432111000 0112346679999999988999999999999553
No 455
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.89 E-value=9.9e-23 Score=236.76 Aligned_cols=186 Identities=19% Similarity=0.139 Sum_probs=147.9
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeC
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~ 247 (1678)
++||+|+||.||+|.... ....+..+|+|.+...... ....++. +|+.+++.+.||||+++++++. .
T Consensus 1 ~~ig~G~~g~v~~~~~~~---~~~~~~~~~iK~~~~~~~~-~~~~~~~--------~e~~~l~~l~h~~iv~~~~~~~-~ 67 (257)
T cd05060 1 KELGHGNFGSVVKGVYLM---KSGKEVEVAVKTLKQEHIA-AGKKEFL--------REASVMAQLDHPCIVRLIGVCK-G 67 (257)
T ss_pred CccCccCceeEEEeEeec---cCCCcceEEEEecccccch-HHHHHHH--------HHHHHHHhcCCCCeeeEEEEEc-C
Confidence 479999999999998542 1123478999998765433 2333444 8999999999999999999876 4
Q ss_pred CeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCcc
Q 000316 248 GLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1678)
Q Consensus 248 ~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~ 326 (1678)
+..++||||++ |+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||+|||+++
T Consensus 68 ~~~~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~--~~kl~df~~~~ 143 (257)
T cd05060 68 EPLMLVMELAPLGPLLKYLKK--RREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRH--QAKISDFGMSR 143 (257)
T ss_pred CceEEEEEeCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCC--cEEeccccccc
Confidence 56899999998 599999983 44689999999999999999999999999999999999999999 89999999998
Q ss_pred cCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCcc
Q 000316 327 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1678)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~i 378 (1678)
......... .......++..|+|||.+.+..++.++|+|+.|.+
T Consensus 144 ~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~ 187 (257)
T cd05060 144 ALGAGSDYY--------RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVT 187 (257)
T ss_pred eeecCCccc--------ccccCccccccccCHHHhcCCCCCccchHHHHHHH
Confidence 543211110 00111123457999999998899999999999954
No 456
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.89 E-value=6.5e-23 Score=237.85 Aligned_cols=182 Identities=18% Similarity=0.201 Sum_probs=150.8
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||++. ..+..+|+|.+.... ....+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~--------~~~~~~~iK~~~~~~----~~~~~~--------~e~~~l~~~~~~~i~~~ 64 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGE--------YTGQKVAVKNIKCDV----TAQAFL--------EETAVMTKLHHKNLVRL 64 (254)
T ss_pred HHHceeeeeeccCCCCceEecc--------cCCCceEEEeecCcc----hHHHHH--------HHHHHHHhCCCCCcCeE
Confidence 4679999999999999999876 356789999986421 122333 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++..+ ..++||||+++ +|.+++.......+++..+..++.|++.||.|||++|++||||||+||+++.++ .+||
T Consensus 65 ~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~--~~kl 141 (254)
T cd05083 65 LGVILHN-GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDG--VAKV 141 (254)
T ss_pred EEEEcCC-CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCC--cEEE
Confidence 9998765 47999999995 999999855455688999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++...... . ....+..|+|||.+.+..++...|+|+.|.+.
T Consensus 142 ~Dfg~~~~~~~~~-------~-------~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l 187 (254)
T cd05083 142 SDFGLARVGSMGV-------D-------NSKLPVKWTAPEALKHKKFSSKSDVWSYGVLL 187 (254)
T ss_pred CCCccceeccccC-------C-------CCCCCceecCHHHhccCCcCchhhHHHHHHHH
Confidence 9999987533110 0 01134579999999888999999999999664
No 457
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.89 E-value=1.2e-22 Score=238.09 Aligned_cols=188 Identities=14% Similarity=0.087 Sum_probs=144.0
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeC
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~ 247 (1678)
+.||+|+||.||+++.. .......+++|.+.... .......++ +|+.+++.++||||+++++.+.+.
T Consensus 1 ~~lg~G~~g~v~~~~~~----~~~~~~~~~~k~~~~~~-~~~~~~~~~--------~e~~~~~~l~h~~iv~~~~~~~~~ 67 (268)
T cd05086 1 QEIGNGWFGKVLLSEIY----TDTGVARVVVKELKANA-SSKEQNEFL--------QQGDPYRILQHPNILQCLGQCVEA 67 (268)
T ss_pred CcCCCCcCceEEEEEEE----cCCCcceEEEEEecCCC-ChHHHHHHH--------HHHHHHhccCCcchhheEEEecCC
Confidence 36999999999999742 11234567788776532 222334454 899999999999999999999999
Q ss_pred CeEEEeccCCC-CCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 248 GLITSVIPKTP-YTLENILQFSP--NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 248 ~~~~lVmEy~~-g~L~~~l~~~~--~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
...|+||||++ |+|.+++.... ....++..++.++.||+.||+|||+++|+||||||+|||++.++ .+||+|||+
T Consensus 68 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~--~~~l~Dfg~ 145 (268)
T cd05086 68 IPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDL--TVKVGDYGI 145 (268)
T ss_pred CccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCc--cEEeccccc
Confidence 99999999999 59999997432 23456777889999999999999999999999999999999998 899999999
Q ss_pred cccCCCCCcccccCCCCcceeecccccCccccccccccc-------ccccccccccccCccc
Q 000316 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-------MDWHSQFNRWWRGELS 379 (1678)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-------~~y~~~~d~W~~G~is 379 (1678)
++......... . .....++..|+|||++.. ..++.++|+|+.|.+.
T Consensus 146 ~~~~~~~~~~~---~------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l 198 (268)
T cd05086 146 GPSRYKEDYIE---T------EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTL 198 (268)
T ss_pred ccccCcchhhh---c------ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHH
Confidence 86432111000 0 011235778999998753 3456789999999654
No 458
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.89 E-value=1.1e-22 Score=241.85 Aligned_cols=187 Identities=13% Similarity=0.111 Sum_probs=155.5
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||++.+. .++..+|+|.+..... .....+. +|+.+++.++||||+++
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~v~iK~~~~~~~--~~~~~~~--------~e~~~l~~l~hp~i~~~ 81 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDV------ATGQEVAIKQMNLQQQ--PKKELII--------NEILVMRENKHPNIVNY 81 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEc------CCCCEEEEEEeccccc--hHHHHHH--------HHHHHHhhcCCCCeeeh
Confidence 578999999999999999999854 4577899999864322 2222333 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++...+..|+|+||+++ +|.+++. ...+++..+..++.|++.||.|||++|++||||||+||+++.++ .+||
T Consensus 82 ~~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~--~~kL 156 (293)
T cd06647 82 LDSYLVGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG--SVKL 156 (293)
T ss_pred hheeeeCCcEEEEEecCCCCcHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCC--CEEE
Confidence 9999999999999999985 9999987 23578889999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||++........ ......+++.|+|||.+....++.++|+|+.|.+.
T Consensus 157 ~dfg~~~~~~~~~~-----------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll 205 (293)
T cd06647 157 TDFGFCAQITPEQS-----------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMA 205 (293)
T ss_pred ccCcceeccccccc-----------ccccccCChhhcCchhhccCCCCchhhHHHHHHHH
Confidence 99999875332110 11123477889999999888899999999999553
No 459
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.89 E-value=9.4e-23 Score=236.02 Aligned_cols=193 Identities=21% Similarity=0.172 Sum_probs=155.5
Q ss_pred eeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeE
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1678)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~ 243 (1678)
+++.+.||+|+||.||+|.+....+ ..+..+|+|.+..... ......+. +|+.+++.++||||++++++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~--~~~~~vaiK~~~~~~~-~~~~~~~~--------~e~~~l~~l~~~~i~~~~~~ 69 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSG--EKEVEVAVKTLKEDAD-EQQIEEFL--------REARIMRKLDHPNIVKLLGV 69 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCC--CCCceEEEEEccCCCC-hHHHHHHH--------HHHHHHHhcCCCchheEEEE
Confidence 3567899999999999999652111 2358899999965422 21333444 89999999999999999999
Q ss_pred EEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEec
Q 000316 244 LKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1678)
Q Consensus 244 ~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DF 322 (1678)
+.+.+..+++|||+++ +|.+++.......+++..+..++.|++.||+|||++|++||||||+||+++.++ .+||+||
T Consensus 70 ~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~--~~~l~df 147 (258)
T smart00219 70 CTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENL--VVKISDF 147 (258)
T ss_pred EcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCC--eEEEccc
Confidence 9999999999999985 999999843333389999999999999999999999999999999999999999 8999999
Q ss_pred CCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 323 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 323 GlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|+++........... .-.++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 148 g~~~~~~~~~~~~~~----------~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~ 194 (258)
T smart00219 148 GLSRDLYDDDYYKKK----------GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLL 194 (258)
T ss_pred CCceecccccccccc----------cCCCcccccChHHhccCCCCcchhHHHHHHHH
Confidence 999865432111000 01156789999999888899999999999664
No 460
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.89 E-value=1e-21 Score=224.60 Aligned_cols=265 Identities=20% Similarity=0.251 Sum_probs=226.4
Q ss_pred eEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEE
Q 000316 1300 FLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVND 1378 (1678)
Q Consensus 1300 ~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~s 1378 (1678)
.+.||+.|+.+.++|.. ...+.+++||+-.|+++.|+++...++++|. |..|+||......+......|.++|+.
T Consensus 233 ~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSa----d~~i~vws~~~~s~~~~~~~h~~~V~~ 308 (506)
T KOG0289|consen 233 KILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASA----DEIIRVWSVPLSSEPTSSRPHEEPVTG 308 (506)
T ss_pred cceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCC----cceEEeeccccccCcccccccccccee
Confidence 38899999999999988 7789999999999999999999999999998 899999999888888888899999999
Q ss_pred EeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCce
Q 000316 1379 ICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLY 1456 (1678)
Q Consensus 1379 V~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~v 1456 (1678)
+..+|.+.++ +|.||+..+.|.++|.++....... +.-.+
T Consensus 309 ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~--------------------------------------s~v~~ 350 (506)
T KOG0289|consen 309 LSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDET--------------------------------------SDVEY 350 (506)
T ss_pred eeeccCCcEEEEecCCceEEEEEccCCcEEEEEeecc--------------------------------------cccee
Confidence 9999999998 6779999999999999876554311 01126
Q ss_pred eEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeE
Q 000316 1457 TCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQC 1536 (1678)
Q Consensus 1457 t~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I 1536 (1678)
++.+++|||..+.+|+.|+.|++||+.++..+..|.+| .+.|.+|+|+ -+|-|+|++++|+.|
T Consensus 351 ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpgh------t~~vk~i~Fs-----------ENGY~Lat~add~~V 413 (506)
T KOG0289|consen 351 TSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGH------TGPVKAISFS-----------ENGYWLATAADDGSV 413 (506)
T ss_pred EEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCC------CCceeEEEec-----------cCceEEEEEecCCeE
Confidence 78888899999999999999999999999988888865 4568899885 456799999999999
Q ss_pred EEEeCCCCcEEEEEeccC-CCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEE--EEecCCEEEE
Q 000316 1537 RLFDVRSGNVIASWRAHD-GYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVIS 1612 (1678)
Q Consensus 1537 ~lWD~~tg~~i~~l~gH~-~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaS 1612 (1678)
++||+|..+..+++.-.+ ..|.++. ...|.+|+.+|.|=+|++++-.+..+..+..+..|.+..+. |..+.+++++
T Consensus 414 ~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s 493 (506)
T KOG0289|consen 414 KLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLAS 493 (506)
T ss_pred EEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEEEecccccceeeehhhhcccccceeeecccceEEee
Confidence 999999988888776432 4688998 88999999999888888888766666777788888876663 7788899999
Q ss_pred EeCCC-eEEEec
Q 000316 1613 ISNNK-IGLSSL 1623 (1678)
Q Consensus 1613 gs~D~-I~vwdl 1623 (1678)
+|.|. ++++.+
T Consensus 494 ~smd~~l~~~a~ 505 (506)
T KOG0289|consen 494 TSMDAILRLYAL 505 (506)
T ss_pred ccchhheEEeec
Confidence 99999 787754
No 461
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.89 E-value=1.5e-22 Score=238.19 Aligned_cols=205 Identities=16% Similarity=0.114 Sum_probs=160.9
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|+.... ....+..+|+|.+...... .....+. +|+++++.++||||+++
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~--~~~~~~~~avK~~~~~~~~-~~~~~~~--------~ei~~l~~l~~~~i~~~ 71 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPL--GDNTGEQVAVKSLNHSGEE-QHRSDFE--------REIEILRTLDHENIVKY 71 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCC--CCCCceEEEEEEeccccch-HHHHHHH--------HHHHHHHhCCCCChheE
Confidence 35688999999999999999985421 1246789999998764332 2233444 89999999999999999
Q ss_pred eeEEEe--CCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 241 LGLLKT--SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 241 ~~~~~~--~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++++.. ....++||||+++ +|.+++... ...++...+..++.|++.||+|||++||+||||||+||+++.++ .+
T Consensus 72 ~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~--~~ 148 (284)
T cd05038 72 KGVCEKPGGRSLRLIMEYLPSGSLRDYLQRH-RDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESED--LV 148 (284)
T ss_pred EeeeecCCCCceEEEEecCCCCCHHHHHHhC-ccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCC--CE
Confidence 999887 5589999999985 999999843 33588999999999999999999999999999999999999998 89
Q ss_pred EEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCC
Q 000316 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1678)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs 394 (1678)
||+|||+++........... .....++..|+|||.+.+..++...|+|+.|++ .+.++.|+.
T Consensus 149 ~l~dfg~~~~~~~~~~~~~~--------~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~-------l~el~tg~~ 210 (284)
T cd05038 149 KISDFGLAKVLPEDKDYYYV--------KEPGESPIFWYAPECLRTSKFSSASDVWSFGVT-------LYELFTYGD 210 (284)
T ss_pred EEcccccccccccCCcceec--------cCCCCCcccccCcHHHccCCCCcccchHHHhhh-------hheeeccCC
Confidence 99999999865421111000 011124457999999988899999999999955 445556653
No 462
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.89 E-value=3.6e-22 Score=219.20 Aligned_cols=285 Identities=12% Similarity=0.149 Sum_probs=215.8
Q ss_pred cccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC------------------C-ceeEEeccccccEEEEE
Q 000316 1276 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK------------------A-SILSSIRAHHGALRSVA 1334 (1678)
Q Consensus 1276 ~~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~------------------~-~~l~tl~gH~~~V~sva 1334 (1678)
+..+..|+..+.+ ||+||.+ +||||.|-+|+|.|++ + .++++|-.|.+.|+++.
T Consensus 105 t~ylt~HK~~cR~aafs~DG~l-----vATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~ 179 (430)
T KOG0640|consen 105 TKYLTSHKSPCRAAAFSPDGSL-----VATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLD 179 (430)
T ss_pred eEEEeecccceeeeeeCCCCcE-----EEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCccccee
Confidence 3455668877764 9999998 9999999999999965 1 26889999999999999
Q ss_pred EecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEe--cCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEec
Q 000316 1335 VGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYY--GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFA 1410 (1678)
Q Consensus 1335 fspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~--gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~ 1410 (1678)
|+|.+..|+||+. |++|+++|.......+.++ .-..+|.+|.|+|.|.++ ++.-.++|+||++|-+|...-.
T Consensus 180 FHPre~ILiS~sr----D~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qcfvsan 255 (430)
T KOG0640|consen 180 FHPRETILISGSR----DNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSAN 255 (430)
T ss_pred ecchhheEEeccC----CCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecC
Confidence 9999999999998 9999999997654433332 356789999999999988 4456899999999887743222
Q ss_pred ccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEE
Q 000316 1411 EQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHL 1490 (1678)
Q Consensus 1411 ~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~ 1490 (1678)
. + ..|++ .++++.+++.|++.++|+.||.||+||--+++|+.+
T Consensus 256 P---d------------------------~qht~----------ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t 298 (430)
T KOG0640|consen 256 P---D------------------------DQHTG----------AITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRT 298 (430)
T ss_pred c---c------------------------ccccc----------ceeEEEecCCccEEEEeccCCcEEeeccccHHHHHH
Confidence 1 1 11222 256777777899999999999999999999999999
Q ss_pred eeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccC--CCe----EEEEcCC
Q 000316 1491 WRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHD--GYV----TKLAAPE 1564 (1678)
Q Consensus 1491 l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~--~~V----~svaspd 1564 (1678)
+...++. +.|.+..|. .+|+++.+.+.|..|++|.+.+|+++..+.|-. +.. .++-...
T Consensus 299 ~~~AH~g----sevcSa~Ft-----------kn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNht 363 (430)
T KOG0640|consen 299 IGNAHGG----SEVCSAVFT-----------KNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHT 363 (430)
T ss_pred HHhhcCC----ceeeeEEEc-----------cCCeEEeecCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCc
Confidence 8754432 223333332 456899999999999999999999999887542 111 1111223
Q ss_pred CCEEEEE-eCCCcEEEEEcCCCCCCCCeEeecCCCCEEE--EEecCCEEEEEeCCC-eEEEe
Q 000316 1565 DHLLVSS-SLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSS 1622 (1678)
Q Consensus 1565 g~~LaSg-S~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwd 1622 (1678)
..+++.- -..+.+.-||.++.....+ .--||++.+.. -||.+.-+.+||+|. +|+|-
T Consensus 364 EdyVl~pDEas~slcsWdaRtadr~~l-~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWy 424 (430)
T KOG0640|consen 364 EDYVLFPDEASNSLCSWDARTADRVAL-LSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWY 424 (430)
T ss_pred cceEEccccccCceeeccccchhhhhh-cccCCCCCceEEEeCCCCCceeeecccceeeeee
Confidence 3444443 3457799999999742222 33589999986 689999999999999 99996
No 463
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.89 E-value=1.4e-22 Score=234.94 Aligned_cols=187 Identities=18% Similarity=0.197 Sum_probs=153.5
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
.+|++.+.||+|+||.||++.+. .+..+|+|.+...... ..++. +|+++++.++||||++++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-------~~~~~~~k~~~~~~~~---~~~~~--------~e~~~l~~l~~~~i~~~~ 65 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-------EKRKVAIKTIREGAMS---EEDFI--------EEAQVMMKLSHPKLVQLY 65 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-------CCCeEEEEECCCCCCC---HHHHH--------HHHHHHHhCCCCCeeeEE
Confidence 47999999999999999999853 3567999998654332 22344 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++......++||||+++ +|.+++.. ....+++..++.++.|++.||+|||++|++||||||+||+++.++ .+||+
T Consensus 66 ~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~--~~~l~ 142 (256)
T cd05112 66 GVCTERSPICLVFEFMEHGCLSDYLRA-QRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQ--VVKVS 142 (256)
T ss_pred EEEccCCceEEEEEcCCCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCC--eEEEC
Confidence 999999999999999995 99999874 334578999999999999999999999999999999999999988 89999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||+++........ ......++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 143 d~g~~~~~~~~~~~----------~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l 191 (256)
T cd05112 143 DFGMTRFVLDDQYT----------SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLM 191 (256)
T ss_pred CCcceeecccCccc----------ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHH
Confidence 99998754311000 00111245679999999988899999999999554
No 464
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.89 E-value=1.3e-22 Score=237.46 Aligned_cols=193 Identities=17% Similarity=0.159 Sum_probs=152.8
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.+.-. ......+|+|..... ........+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~---~~~~~~v~ik~~~~~-~~~~~~~~~~--------~e~~~l~~~~h~~i~~~ 72 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSP---ENEKIAVAVKTCKNC-TSPSVREKFL--------QEAYIMRQFDHPHIVKL 72 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecC---CCCCcceEEEecCCc-CCHHHHHHHH--------HHHHHHHhCCCCchhce
Confidence 35699999999999999999985311 123456899988653 2223333444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+ +..|+||||++ |+|.+++... ...++...+..++.|++.||+|||++|++||||||+|||++.++ .+||
T Consensus 73 ~~~~~~-~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~--~~~l 148 (270)
T cd05056 73 IGVITE-NPVWIVMELAPLGELRSYLQVN-KYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPD--CVKL 148 (270)
T ss_pred eEEEcC-CCcEEEEEcCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCC--CeEE
Confidence 999875 45789999998 5999999742 34589999999999999999999999999999999999999988 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++......... .....++..|+|||.+....++.++|+|+.|.+.
T Consensus 149 ~d~g~~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 198 (270)
T cd05056 149 GDFGLSRYLEDESYYK----------ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 198 (270)
T ss_pred ccCceeeeccccccee----------cCCCCccccccChhhhccCCCCchhhhHHHHHHH
Confidence 9999998644211000 0011234579999999888899999999999664
No 465
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.89 E-value=2.1e-21 Score=244.42 Aligned_cols=284 Identities=15% Similarity=0.184 Sum_probs=225.1
Q ss_pred ccCCCC-ceEe--ecCCCCCCCCCeEEEEe--CCCCEEEEeCCC-------------ceeEEeccccccEEEEEEecCCC
Q 000316 1279 LMKCEP-WFWF--PTPAASWDGPDFLGRVG--GLKDESPWKIKA-------------SILSSIRAHHGALRSVAVGQDEC 1340 (1678)
Q Consensus 1279 l~gH~~-~V~~--fSpdg~~~~~~~LasgS--~D~~v~lWd~~~-------------~~l~tl~gH~~~V~svafspdg~ 1340 (1678)
..+|.+ .|++ .+|||.. +|||+ .|+.+++|+.+. ..+.+...|.++|+||.|++||+
T Consensus 8 wv~H~~~~IfSIdv~pdg~~-----~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~ 82 (942)
T KOG0973|consen 8 WVNHNEKSIFSIDVHPDGVK-----FATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGS 82 (942)
T ss_pred ccccCCeeEEEEEecCCcee-----EecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCC
Confidence 344554 3443 8899987 99999 999999999651 13556778999999999999999
Q ss_pred EEEEEecCCCCCCeEEEEeCCC------------------CeEEEEEecCCccEEEEeecCCCCcEEeC--CCcEEEEEC
Q 000316 1341 TVFTAGIGPGFKGTVQKWELTR------------------INCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNS 1400 (1678)
Q Consensus 1341 ~LaSgS~d~~~DgtVrlWDl~t------------------g~~l~~l~gH~~~V~sV~fs~~~~~laS~--DgtVrIWD~ 1400 (1678)
+||+||+ |+.|-||+... .++...+.||+..|.+|+|+|++.+++|+ |++|.|||.
T Consensus 83 ~lAsGSD----D~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~ 158 (942)
T KOG0973|consen 83 YLASGSD----DRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNA 158 (942)
T ss_pred eEeeccC----cceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEcc
Confidence 9999997 89999999762 14678899999999999999999999776 999999999
Q ss_pred CCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEE
Q 000316 1401 QTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFI 1480 (1678)
Q Consensus 1401 ~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlW 1480 (1678)
.+.+++.++.+|. +.|..+.|+ |-|+++++-+.|++|++|
T Consensus 159 ~tF~~~~vl~~H~------------------------------s~VKGvs~D----------P~Gky~ASqsdDrtikvw 198 (942)
T KOG0973|consen 159 KTFELLKVLRGHQ------------------------------SLVKGVSWD----------PIGKYFASQSDDRTLKVW 198 (942)
T ss_pred ccceeeeeeeccc------------------------------ccccceEEC----------CccCeeeeecCCceEEEE
Confidence 9999988888764 234445555 459999999999999999
Q ss_pred ECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEec----CCeEEEEeCCCCcEEEEEeccCCC
Q 000316 1481 DINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLS----SGQCRLFDVRSGNVIASWRAHDGY 1556 (1678)
Q Consensus 1481 Dl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~----Dg~I~lWD~~tg~~i~~l~gH~~~ 1556 (1678)
++.+....+.+.++...+........+ +|+|||.+|+++.. -.++.|.+-.+.+.-..+-||..+
T Consensus 199 rt~dw~i~k~It~pf~~~~~~T~f~Rl-----------SWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p 267 (942)
T KOG0973|consen 199 RTSDWGIEKSITKPFEESPLTTFFLRL-----------SWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAP 267 (942)
T ss_pred EcccceeeEeeccchhhCCCcceeeec-----------ccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCc
Confidence 988877888877665543333444444 45578889988753 347889998888888999999999
Q ss_pred eEEEE-cC------CC-------C----EEEEEeCCCcEEEEEcCCCCCCCCeEe-ecCCCCEE--EEEecCCEEEEEeC
Q 000316 1557 VTKLA-AP------ED-------H----LLVSSSLDKTLRIWDLRRNWPSQPTVF-KGHTNGIS--GFSVWGQDVISISN 1615 (1678)
Q Consensus 1557 V~sva-sp------dg-------~----~LaSgS~DgtI~IWDl~~~~~~~~~~l-~gH~~~V~--afSpdg~~LaSgs~ 1615 (1678)
+.++. .| .. . .+|+||.|++|.||..... +++... .-....|. +|+|||-.|..||-
T Consensus 268 ~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~--RPl~vi~~lf~~SI~DmsWspdG~~LfacS~ 345 (942)
T KOG0973|consen 268 VEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALP--RPLFVIHNLFNKSIVDMSWSPDGFSLFACSL 345 (942)
T ss_pred eEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCC--CchhhhhhhhcCceeeeeEcCCCCeEEEEec
Confidence 99998 43 11 1 6889999999999998665 444322 23345666 59999999999999
Q ss_pred CC-eEEEecC
Q 000316 1616 NK-IGLSSLS 1624 (1678)
Q Consensus 1616 D~-I~vwdl~ 1624 (1678)
|| |.+..++
T Consensus 346 DGtV~~i~Fe 355 (942)
T KOG0973|consen 346 DGTVALIHFE 355 (942)
T ss_pred CCeEEEEEcc
Confidence 99 9999876
No 466
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.88 E-value=1.3e-22 Score=242.31 Aligned_cols=195 Identities=17% Similarity=0.161 Sum_probs=151.7
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|+..+.||+|+||.||+|.+... + ......+|+|.+.... ......++. +|+.+++.++||||+++
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~-~-~~~~~~vaiK~~~~~~-~~~~~~~~~--------~e~~~~~~l~h~niv~~ 74 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPE-G-ETVKIPVAIKILNETT-GPKANVEFM--------DEALIMASMDHPHLVRL 74 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecC-C-CcceeeEEEEeccccC-CHHHHHHHH--------HHHHHHHhCCCCCcccE
Confidence 45789999999999999999986421 1 0112467999886532 222222343 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++... ..++++||++ |+|.+++.. ....+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||
T Consensus 75 ~~~~~~~-~~~~v~e~~~~g~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~--~~kL 150 (303)
T cd05110 75 LGVCLSP-TIQLVTQLMPHGCLLDYVHE-HKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPN--HVKI 150 (303)
T ss_pred EEEEcCC-CceeeehhcCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCC--ceEE
Confidence 9998754 4678999999 699999873 334578899999999999999999999999999999999999988 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++.......... .....++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 151 ~Dfg~~~~~~~~~~~~~---------~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l 201 (303)
T cd05110 151 TDFGLARLLEGDEKEYN---------ADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTI 201 (303)
T ss_pred ccccccccccCcccccc---------cCCCccccccCCHHHhccCCCChHHHHHHHHHHH
Confidence 99999986432111100 0112246689999999989999999999999553
No 467
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.88 E-value=1.4e-21 Score=226.95 Aligned_cols=305 Identities=17% Similarity=0.230 Sum_probs=215.2
Q ss_pred CCCceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCe----EEEEE-ecCCccEEEEeecCCCCcE-
Q 000316 1315 IKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN----CVSGY-YGHEEVVNDICVLSSSGRI- 1388 (1678)
Q Consensus 1315 ~~~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~----~l~~l-~gH~~~V~sV~fs~~~~~l- 1388 (1678)
+-+..-..+++|+..|.++++.|.|..++|||- |.+|++||+.... ..+.+ ..-...|+++.|++.+..+
T Consensus 155 IP~shEi~l~hgtk~Vsal~~Dp~GaR~~sGs~----Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iL 230 (641)
T KOG0772|consen 155 IPGSHEIQLKHGTKIVSALAVDPSGARFVSGSL----DYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQIL 230 (641)
T ss_pred CCccceEeccCCceEEEEeeecCCCceeeeccc----cceEEEEecccccccchhhhccCcccccccceeeecCCCCeEE
Confidence 345566789999999999999999999999995 9999999986431 12222 2345689999999988877
Q ss_pred -EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCE
Q 000316 1389 -ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVER 1467 (1678)
Q Consensus 1389 -aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~ 1467 (1678)
+|+....+++|- .|..+..+..... .-..+.+..+|...+++.+|+|. +.+.
T Consensus 231 vvsg~aqakl~DR-dG~~~~e~~KGDQ-----------------YI~Dm~nTKGHia~lt~g~whP~---------~k~~ 283 (641)
T KOG0772|consen 231 VVSGSAQAKLLDR-DGFEIVEFSKGDQ-----------------YIRDMYNTKGHIAELTCGCWHPD---------NKEE 283 (641)
T ss_pred EEecCcceeEEcc-CCceeeeeeccch-----------------hhhhhhccCCceeeeeccccccC---------cccc
Confidence 788999999995 4655444332110 01234445567777777777775 4678
Q ss_pred EEEEECCCcEEEEECCCCe-eeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCc-
Q 000316 1468 LVVGIGNGSLRFIDINQGQ-KLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN- 1545 (1678)
Q Consensus 1468 Lasgs~DgtVrlWDl~tg~-~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~- 1545 (1678)
+++++.||++|+||+..-+ .+..++..... +-.-.+...+| +++|+++|+|+.||.|.+||.++..
T Consensus 284 FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~-g~Rv~~tsC~~-----------nrdg~~iAagc~DGSIQ~W~~~~~~v 351 (641)
T KOG0772|consen 284 FLTCSYDGTLRIWDVNNTKSQLQVIKTKPAG-GKRVPVTSCAW-----------NRDGKLIAAGCLDGSIQIWDKGSRTV 351 (641)
T ss_pred eEEecCCCcEEEEecCCchhheeEEeeccCC-CcccCceeeec-----------CCCcchhhhcccCCceeeeecCCccc
Confidence 9999999999999997643 33444432211 12223444444 3677899999999999999986542
Q ss_pred -E-EEEEeccCC--CeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCC----CEEEEEecCCEEEEEeC-
Q 000316 1546 -V-IASWRAHDG--YVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN----GISGFSVWGQDVISISN- 1615 (1678)
Q Consensus 1546 -~-i~~l~gH~~--~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~----~V~afSpdg~~LaSgs~- 1615 (1678)
+ +..-.+|.. .|++|. +++|++|+|-|.|+++++||++..+ +++.+..|-.. .=.+|||+.+++++|+.
T Consensus 352 ~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~k-kpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~ 430 (641)
T KOG0772|consen 352 RPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFK-KPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSA 430 (641)
T ss_pred ccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccc-cchhhhcCCCccCCCCccccCCCceEEEecccc
Confidence 2 233347877 899999 9999999999999999999999864 44444333222 11269999999999863
Q ss_pred -----CC-eEEEecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1616 -----NK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1616 -----D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
-+ +.+||-. .....+.... ....|..+.|+|.-..+.+|+.||++++|
T Consensus 431 ~~~~~~g~L~f~d~~-----------t~d~v~ki~i---~~aSvv~~~WhpkLNQi~~gsgdG~~~vy 484 (641)
T KOG0772|consen 431 PNGMTAGTLFFFDRM-----------TLDTVYKIDI---STASVVRCLWHPKLNQIFAGSGDGTAHVY 484 (641)
T ss_pred cCCCCCceEEEEecc-----------ceeeEEEecC---CCceEEEEeecchhhheeeecCCCceEEE
Confidence 22 6777732 1112222211 13457889999999999999999999986
No 468
>PTZ00420 coronin; Provisional
Probab=99.88 E-value=1.2e-20 Score=237.33 Aligned_cols=247 Identities=16% Similarity=0.165 Sum_probs=176.6
Q ss_pred CCeEEEEeCCCCeEEEEEecCCccEEEEeecCC-CCcEE--eCCCcEEEEECCCCce-eEEecccCccccccCCCCCCcc
Q 000316 1352 KGTVQKWELTRINCVSGYYGHEEVVNDICVLSS-SGRIA--SCDGTLHVWNSQTGKL-LSVFAEQSMDSLHGGSPSSSIS 1427 (1678)
Q Consensus 1352 DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~-~~~la--S~DgtVrIWD~~tg~~-~~~l~~~~~~~~~~~s~s~~~~ 1427 (1678)
++.|++|+..+...+..+.+|.+.|.+++|+|+ +..++ |.|++|+|||+.++.. ...+..
T Consensus 53 ~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~---------------- 116 (568)
T PTZ00420 53 IGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKD---------------- 116 (568)
T ss_pred eeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCcccccccc----------------
Confidence 899999999888888999999999999999997 55664 4499999999986532 111100
Q ss_pred ccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCE-EEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceE
Q 000316 1428 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVER-LVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSA 1506 (1678)
Q Consensus 1428 ~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~-Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~s 1506 (1678)
.+..+.-+...+++++|+|++.. +++|+.|++|++||+++++.+..+.. ...|.+
T Consensus 117 -----------------p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~-------~~~V~S 172 (568)
T PTZ00420 117 -----------------PQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINM-------PKKLSS 172 (568)
T ss_pred -----------------ceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEec-------CCcEEE
Confidence 00011112233566666666765 57899999999999999987766642 234788
Q ss_pred EEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE------cCCCCEEEEEeCCC----c
Q 000316 1507 ICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA------APEDHLLVSSSLDK----T 1576 (1678)
Q Consensus 1507 va~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva------spdg~~LaSgS~Dg----t 1576 (1678)
++|+ ++|.+|++++.|+.|+|||+++++.+.++.+|.+.+.+.. ++++.+|+|+|.|+ +
T Consensus 173 lsws-----------pdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~ 241 (568)
T PTZ00420 173 LKWN-----------IKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMRE 241 (568)
T ss_pred EEEC-----------CCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccE
Confidence 8875 5668999999999999999999999999999998754432 37888999988775 7
Q ss_pred EEEEEcCCCCCCCCe--EeecCCCCEE-EE-EecCCEEEEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCCCccC
Q 000316 1577 LRIWDLRRNWPSQPT--VFKGHTNGIS-GF-SVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLS 1651 (1678)
Q Consensus 1577 I~IWDl~~~~~~~~~--~l~gH~~~V~-af-Spdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~ 1651 (1678)
|+|||+++.. ..+. .+..+.+.+. .+ .++|.++++|+.|+ |++|++.. +.. ..+ ... .+..
T Consensus 242 VkLWDlr~~~-~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~-----~~~----~~l---~~~-~s~~ 307 (568)
T PTZ00420 242 MKLWDLKNTT-SALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSL-----GSI----RKV---NEY-KSCS 307 (568)
T ss_pred EEEEECCCCC-CceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccC-----CcE----Eee---ccc-ccCC
Confidence 9999999632 3333 3344444443 33 34488899999999 99999852 111 011 111 2556
Q ss_pred cEEEEEEecCCC
Q 000316 1652 VLSSISILPFSR 1663 (1678)
Q Consensus 1652 ~I~svafsPd~~ 1663 (1678)
++.+++|.|...
T Consensus 308 p~~g~~f~Pkr~ 319 (568)
T PTZ00420 308 PFRSFGFLPKQI 319 (568)
T ss_pred CccceEEccccc
Confidence 788899998653
No 469
>PTZ00421 coronin; Provisional
Probab=99.88 E-value=1.1e-20 Score=237.01 Aligned_cols=244 Identities=14% Similarity=0.170 Sum_probs=175.4
Q ss_pred ccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEE-------------EEEecCCccEEEEeecC-CCCcE--E
Q 000316 1326 HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCV-------------SGYYGHEEVVNDICVLS-SSGRI--A 1389 (1678)
Q Consensus 1326 H~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l-------------~~l~gH~~~V~sV~fs~-~~~~l--a 1389 (1678)
|-..|+....++|+..+++++. +..+..|+...+..+ ..+.||.+.|++++|+| ++..+ +
T Consensus 19 ~~~~i~~~~~~~d~~~~~~~n~----~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSg 94 (493)
T PTZ00421 19 HFLNVTPSTALWDCSNTIACND----RFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTA 94 (493)
T ss_pred ceeccccccccCCCCCcEeECC----ceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEE
Confidence 4456777778888777788775 677778886544332 14679999999999999 66666 4
Q ss_pred eCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCC-CEE
Q 000316 1390 SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECV-ERL 1468 (1678)
Q Consensus 1390 S~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g-~~L 1468 (1678)
|.|++|++||+.++........ .+....+|... |.+++|+|++ +.|
T Consensus 95 S~DgtIkIWdi~~~~~~~~~~~-----------------------~l~~L~gH~~~----------V~~l~f~P~~~~iL 141 (493)
T PTZ00421 95 SEDGTIMGWGIPEEGLTQNISD-----------------------PIVHLQGHTKK----------VGIVSFHPSAMNVL 141 (493)
T ss_pred eCCCEEEEEecCCCccccccCc-----------------------ceEEecCCCCc----------EEEEEeCcCCCCEE
Confidence 5599999999976532110000 00111223334 4455555554 689
Q ss_pred EEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEE
Q 000316 1469 VVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1548 (1678)
Q Consensus 1469 asgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~ 1548 (1678)
++|+.|++|++||+++++.+..+.+| ...|.+++|+ ++|.+|++|+.||+|++||+++++.+.
T Consensus 142 aSgs~DgtVrIWDl~tg~~~~~l~~h------~~~V~sla~s-----------pdG~lLatgs~Dg~IrIwD~rsg~~v~ 204 (493)
T PTZ00421 142 ASAGADMVVNVWDVERGKAVEVIKCH------SDQITSLEWN-----------LDGSLLCTTSKDKKLNIIDPRDGTIVS 204 (493)
T ss_pred EEEeCCCEEEEEECCCCeEEEEEcCC------CCceEEEEEE-----------CCCCEEEEecCCCEEEEEECCCCcEEE
Confidence 99999999999999999988888754 4458888886 456899999999999999999999999
Q ss_pred EEeccCCCeE-EEE-cCCCCEEEEEe----CCCcEEEEEcCCCCCCCCeEeecCCC-CEE--EEEecCCEEEEEe-CCC-
Q 000316 1549 SWRAHDGYVT-KLA-APEDHLLVSSS----LDKTLRIWDLRRNWPSQPTVFKGHTN-GIS--GFSVWGQDVISIS-NNK- 1617 (1678)
Q Consensus 1549 ~l~gH~~~V~-sva-spdg~~LaSgS----~DgtI~IWDl~~~~~~~~~~l~gH~~-~V~--afSpdg~~LaSgs-~D~- 1617 (1678)
.+.+|.+.+. .+. .+++..+++++ .|++|++||+++.. ........+.. .+. .|+++++.|++|+ .|+
T Consensus 205 tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~-~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~ 283 (493)
T PTZ00421 205 SVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMA-SPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGN 283 (493)
T ss_pred EEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCC-CceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCe
Confidence 9999987543 333 66767776654 47999999998753 23333333333 333 4889999999887 488
Q ss_pred eEEEecC
Q 000316 1618 IGLSSLS 1624 (1678)
Q Consensus 1618 I~vwdl~ 1624 (1678)
|++||+.
T Consensus 284 Iriwdl~ 290 (493)
T PTZ00421 284 IRCFELM 290 (493)
T ss_pred EEEEEee
Confidence 9999986
No 470
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.88 E-value=1.6e-22 Score=233.87 Aligned_cols=184 Identities=15% Similarity=0.117 Sum_probs=149.3
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeC
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~ 247 (1678)
++||+|+||.||+|.+. . +..||+|.+...... .....+. +|+++++.++||||+++++++.+.
T Consensus 1 ~~lg~g~~g~v~~~~~~------~-~~~v~~K~~~~~~~~-~~~~~~~--------~e~~~l~~l~~~~i~~~~~~~~~~ 64 (251)
T cd05041 1 EKIGKGNFGDVYKGVLK------G-NTEVAVKTCRSTLPP-DLKRKFL--------QEAEILKQYDHPNIVKLIGVCVQK 64 (251)
T ss_pred CccccCCCceEEEEEEe------C-CCcEEEEeccccCCH-HHHHHHH--------HHHHHHHhCCCCCeEEEEEEEecC
Confidence 47999999999999853 3 788999998754322 2333444 899999999999999999999999
Q ss_pred CeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCcc
Q 000316 248 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1678)
Q Consensus 248 ~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~ 326 (1678)
...++||||++| +|.+++.. ....++...+..++.|++.||.|||++||+||||||+|||++.++ .+||+|||+++
T Consensus 65 ~~~~~v~e~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~--~~~l~d~g~~~ 141 (251)
T cd05041 65 QPIYIVMELVPGGSLLTFLRK-KKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENN--VLKISDFGMSR 141 (251)
T ss_pred CCeEEEEEcCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCC--cEEEeeccccc
Confidence 999999999985 99999974 234678899999999999999999999999999999999999999 89999999998
Q ss_pred cCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 327 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
......... . ......+..|+|||.+.+..++..+|+|+.|.+.
T Consensus 142 ~~~~~~~~~--~-------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~ 185 (251)
T cd05041 142 EEEGGIYTV--S-------DGLKQIPIKWTAPEALNYGRYTSESDVWSYGILL 185 (251)
T ss_pred cccCCccee--c-------cccCcceeccCChHhhccCCCCcchhHHHHHHHH
Confidence 543111000 0 0001134569999999888999999999999654
No 471
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.88 E-value=5.9e-23 Score=239.06 Aligned_cols=186 Identities=16% Similarity=0.119 Sum_probs=144.5
Q ss_pred eeeeeeCcEEEEEEEecCCCCc-cccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEe
Q 000316 168 AFIGICSYSIFEELASNFLSGC-LEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~-~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~ 246 (1678)
+.||+|+||.||+|.++..... ......+|+|.+... .......+. +|+.+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~--------~e~~~l~~~~h~~iv~~~~~~~~ 70 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS--HRNYSESFF--------EAASMMSQLSHKHLVLNYGVCVC 70 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch--hHHHHHHHH--------HHHHHHHhCCCCChhheeeEEEe
Confidence 4699999999999986421110 123455888887542 122223333 89999999999999999999999
Q ss_pred CCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc------eeEEE
Q 000316 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW------SWLYI 319 (1678)
Q Consensus 247 ~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~------~~lKL 319 (1678)
++..++||||+++ +|.+++.. ....+++..++.++.||+.||+|||++||+||||||+|||++.++. ..+|+
T Consensus 71 ~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l 149 (258)
T cd05078 71 GDESIMVQEYVKFGSLDTYLKK-NKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKL 149 (258)
T ss_pred CCCcEEEEecCCCCcHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEe
Confidence 9999999999985 99999973 2345788999999999999999999999999999999999987762 13799
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCccccccccccc-ccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~y~~~~d~W~~G~is 379 (1678)
+|||++...... ....++..|+|||++.+ ..++..+|+|+.|.+.
T Consensus 150 ~d~g~~~~~~~~---------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l 195 (258)
T cd05078 150 SDPGISITVLPK---------------EILLERIPWVPPECIENPQNLSLAADKWSFGTTL 195 (258)
T ss_pred cccccccccCCc---------------hhccccCCccCchhccCCCCCCchhhHHHHHHHH
Confidence 999998743310 11236778999998876 4578899999999554
No 472
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.88 E-value=1.5e-20 Score=209.84 Aligned_cols=279 Identities=17% Similarity=0.183 Sum_probs=220.5
Q ss_pred eEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeC--CCcE
Q 000316 1320 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASC--DGTL 1395 (1678)
Q Consensus 1320 l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~--DgtV 1395 (1678)
.+.++.-.+.|+++.|+++|..+++++. |.+++|||..+|+++.++..+...|..++|......+ +|. |.+|
T Consensus 7 ak~f~~~~~~i~sl~fs~~G~~litss~----dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tI 82 (311)
T KOG1446|consen 7 AKVFRETNGKINSLDFSDDGLLLITSSE----DDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTI 82 (311)
T ss_pred ccccccCCCceeEEEecCCCCEEEEecC----CCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCce
Confidence 3445556788999999999999999887 8899999999999999999999999999997766665 444 9999
Q ss_pred EEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCC
Q 000316 1396 HVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNG 1475 (1678)
Q Consensus 1396 rIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~Dg 1475 (1678)
|.-++.+++.++.|.+|. ..|+.+..+|-+..+++++.|+
T Consensus 83 ryLsl~dNkylRYF~GH~----------------------------------------~~V~sL~~sP~~d~FlS~S~D~ 122 (311)
T KOG1446|consen 83 RYLSLHDNKYLRYFPGHK----------------------------------------KRVNSLSVSPKDDTFLSSSLDK 122 (311)
T ss_pred EEEEeecCceEEEcCCCC----------------------------------------ceEEEEEecCCCCeEEecccCC
Confidence 999999999999999874 2366777778789999999999
Q ss_pred cEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCC--cEEEEEe--
Q 000316 1476 SLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG--NVIASWR-- 1551 (1678)
Q Consensus 1476 tVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg--~~i~~l~-- 1551 (1678)
+||+||++..++...+..... ..+|+. |.|-++|+|...+.|++||+|.- .+..++.
T Consensus 123 tvrLWDlR~~~cqg~l~~~~~--------pi~AfD-----------p~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~ 183 (311)
T KOG1446|consen 123 TVRLWDLRVKKCQGLLNLSGR--------PIAAFD-----------PEGLIFALANGSELIKLYDLRSFDKGPFTTFSIT 183 (311)
T ss_pred eEEeeEecCCCCceEEecCCC--------cceeEC-----------CCCcEEEEecCCCeEEEEEecccCCCCceeEccC
Confidence 999999998877665543221 223443 56678999998889999999973 3445554
Q ss_pred -ccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCE----E-EEEecCCEEEEEeCCC-eEEEec
Q 000316 1552 -AHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGI----S-GFSVWGQDVISISNNK-IGLSSL 1623 (1678)
Q Consensus 1552 -gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V----~-afSpdg~~LaSgs~D~-I~vwdl 1623 (1678)
+-....+.|. +|||++++-+...+.+.+.|.-+| ....++.++...- . +|+||++++++|++|+ |.+|++
T Consensus 184 ~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G--~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~ 261 (311)
T KOG1446|consen 184 DNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDG--TVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNL 261 (311)
T ss_pred CCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCC--cEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEc
Confidence 3355678888 999999999999999999999998 4556676665533 3 4999999999999999 999998
Q ss_pred CCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1624 SKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1624 ~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
. .|....+ ..+ .+.+++.++.|+|..-++|+++ ..+-+|.
T Consensus 262 ~-----tg~~v~~-------~~~-~~~~~~~~~~fnP~~~mf~sa~--s~l~fw~ 301 (311)
T KOG1446|consen 262 E-----TGKKVAV-------LRG-PNGGPVSCVRFNPRYAMFVSAS--SNLVFWL 301 (311)
T ss_pred C-----CCcEeeE-------ecC-CCCCCccccccCCceeeeeecC--ceEEEEe
Confidence 4 2322111 111 2567899999999999998774 5577773
No 473
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.88 E-value=1.5e-22 Score=237.36 Aligned_cols=183 Identities=19% Similarity=0.209 Sum_probs=145.1
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccc--eEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccceeeEE
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDC--VLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLL 244 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~--~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~l~~~~ 244 (1678)
+.||+|+||.||+|++. .++ ..+|+|.++.. ........+. +|+.+++++ +||||+++++++
T Consensus 1 ~~lg~g~~g~v~~~~~~------~~~~~~~~~~k~~~~~-~~~~~~~~~~--------~E~~~l~~l~~h~~iv~~~~~~ 65 (270)
T cd05047 1 DVIGEGNFGQVLKARIK------KDGLRMDAAIKRMKEY-ASKDDHRDFA--------GELEVLCKLGHHPNIINLLGAC 65 (270)
T ss_pred CcCCCCCCceEEEEEEc------CCCCeeEEEEEEcccc-CCHHHHHHHH--------HHHHHHHhhccCCCeeeEEEEE
Confidence 36899999999999864 233 35688887642 2222233343 899999999 899999999999
Q ss_pred EeCCeEEEeccCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEe
Q 000316 245 KTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309 (1678)
Q Consensus 245 ~~~~~~~lVmEy~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl 309 (1678)
...+..|+||||++ |+|.+++.... ...++...++.++.|++.||+|||++||+||||||+|||+
T Consensus 66 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili 145 (270)
T cd05047 66 EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV 145 (270)
T ss_pred ecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEE
Confidence 99999999999998 59999997422 1247888999999999999999999999999999999999
Q ss_pred cCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 310 TDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 310 ~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+.++ .+||+|||+++...... ... ....+..|+|||.+....++.+.|+|+.|.+.
T Consensus 146 ~~~~--~~kl~dfgl~~~~~~~~------~~~------~~~~~~~y~apE~~~~~~~~~~~Di~slG~il 201 (270)
T cd05047 146 GENY--VAKIADFGLSRGQEVYV------KKT------MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 201 (270)
T ss_pred cCCC--eEEECCCCCccccchhh------hcc------CCCCccccCChHHHccCCCCchhhHHHHHHHH
Confidence 9999 89999999986322100 000 01134579999999988999999999999554
No 474
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.88 E-value=2.7e-20 Score=196.44 Aligned_cols=275 Identities=19% Similarity=0.257 Sum_probs=215.2
Q ss_pred eecCCCCCCCCCeEEEEeCCCCEEEEeCC-------C------c---eeEEeccccccEEEEEEecCCCEEEEEecCCCC
Q 000316 1288 FPTPAASWDGPDFLGRVGGLKDESPWKIK-------A------S---ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGF 1351 (1678)
Q Consensus 1288 ~fSpdg~~~~~~~LasgS~D~~v~lWd~~-------~------~---~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~ 1351 (1678)
+|.|.|.+ .|.||..++.|+.... + . ..+.-+.|.++|.|++|||+|+.|++||.
T Consensus 39 ~fhp~g~l-----yavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsn---- 109 (350)
T KOG0641|consen 39 AFHPAGGL-----YAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSN---- 109 (350)
T ss_pred EecCCCce-----EEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCC----
Confidence 49999997 8999999999975421 1 1 22344679999999999999999999997
Q ss_pred CCeEEEEeCCCCeEE-----EEEecCCccEEEEeecCC---CC-cEEeC---CCcEEEEECCCCceeEEecccCcccccc
Q 000316 1352 KGTVQKWELTRINCV-----SGYYGHEEVVNDICVLSS---SG-RIASC---DGTLHVWNSQTGKLLSVFAEQSMDSLHG 1419 (1678)
Q Consensus 1352 DgtVrlWDl~tg~~l-----~~l~gH~~~V~sV~fs~~---~~-~laS~---DgtVrIWD~~tg~~~~~l~~~~~~~~~~ 1419 (1678)
|++|++--.+...|. ..+.-|.+.|.+++|..+ ++ .++|. |..|.+-|..+|+..+.+.+|.
T Consensus 110 dk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sght------ 183 (350)
T KOG0641|consen 110 DKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHT------ 183 (350)
T ss_pred CceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCc------
Confidence 999999766544332 346779999999999643 33 34554 8888899999998887777653
Q ss_pred CCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCccc
Q 000316 1420 GSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELG 1499 (1678)
Q Consensus 1420 ~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~ 1499 (1678)
+-|.++- +=+|-++++|+.|.+||+||++-..++.++.......+
T Consensus 184 ------------------------ghilaly-----------swn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~g 228 (350)
T KOG0641|consen 184 ------------------------GHILALY-----------SWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGG 228 (350)
T ss_pred ------------------------ccEEEEE-----------EecCcEEEccCCCceEEEEeeeccceeeeccCcccCCC
Confidence 2232221 11366999999999999999999999988764322212
Q ss_pred -CCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcE
Q 000316 1500 -FPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTL 1577 (1678)
Q Consensus 1500 -~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI 1577 (1678)
-++.|.+||.. |.|.+|++|..|..+.+||+|-|+.++.+..|+..|++|. +|...++++||.|.+|
T Consensus 229 lessavaav~vd-----------psgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~i 297 (350)
T KOG0641|consen 229 LESSAVAAVAVD-----------PSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKI 297 (350)
T ss_pred cccceeEEEEEC-----------CCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceE
Confidence 24668888875 5668999999999999999999999999999999999999 9999999999999999
Q ss_pred EEEEcCCCCC--CCCeEeecCCCCEE-E-EEecCCEEEEEeCCC-eEEEec
Q 000316 1578 RIWDLRRNWP--SQPTVFKGHTNGIS-G-FSVWGQDVISISNNK-IGLSSL 1623 (1678)
Q Consensus 1578 ~IWDl~~~~~--~~~~~l~gH~~~V~-a-fSpdg~~LaSgs~D~-I~vwdl 1623 (1678)
++-|++.... ..+.....|.+.+. + |.|+.--+++.|.|+ +.+|.+
T Consensus 298 kltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~ 348 (350)
T KOG0641|consen 298 KLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWAL 348 (350)
T ss_pred EEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEecc
Confidence 9999976431 22335566777655 3 888888899999999 999986
No 475
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.88 E-value=2.5e-22 Score=233.79 Aligned_cols=190 Identities=18% Similarity=0.173 Sum_probs=146.6
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEE-e
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLK-T 246 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~-~ 246 (1678)
+.||+|+||.||+|.+.. .......+|+|.+... ........+. +|+.+++.++||||+++++++. .
T Consensus 1 ~~lg~g~~g~v~~~~~~~---~~~~~~~~aiK~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~~iv~~~~~~~~~ 68 (262)
T cd05058 1 RVIGKGHFGCVYHGTLID---SDGQKIHCAVKSLNRI-TDLEEVEQFL--------KEGIIMKDFSHPNVLSLLGICLPS 68 (262)
T ss_pred CcccccCCceEEEEEEec---CCCceEEEEEEecCcc-CCHHHHHHHH--------HHHHHHccCCCCCcceEEEEeecC
Confidence 468999999999998531 1135678999998542 2222333444 8999999999999999999765 4
Q ss_pred CCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCc
Q 000316 247 SGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1678)
Q Consensus 247 ~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA 325 (1678)
++..++||||+. |+|.+++... ....+...+..++.||+.||.|||+++|+||||||+|||+++++ .+||+|||++
T Consensus 69 ~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~--~~kl~dfg~~ 145 (262)
T cd05058 69 EGSPLVVLPYMKHGDLRNFIRSE-THNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESF--TVKVADFGLA 145 (262)
T ss_pred CCCcEEEEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCC--cEEECCcccc
Confidence 556899999998 5999999742 34467778888999999999999999999999999999999998 8999999999
Q ss_pred ccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+......... .. ......++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 146 ~~~~~~~~~~----~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 192 (262)
T cd05058 146 RDIYDKEYYS----VH---NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 192 (262)
T ss_pred ccccCCccee----ec---ccccCcCCccccChhHhccCccchHHHHHHHHHHH
Confidence 8543211000 00 01122356789999999888999999999999543
No 476
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.88 E-value=1.6e-21 Score=233.76 Aligned_cols=270 Identities=21% Similarity=0.338 Sum_probs=213.5
Q ss_pred eeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEE--EEecCCccEEE-EeecC-CCCcE--EeCC
Q 000316 1319 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVS--GYYGHEEVVND-ICVLS-SSGRI--ASCD 1392 (1678)
Q Consensus 1319 ~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~--~l~gH~~~V~s-V~fs~-~~~~l--aS~D 1392 (1678)
.-+.+.||+..|+.+++.++. .+++||. ||++++|+-..++.+. .+.+|.+.|.. +++.+ ++.++ ++.|
T Consensus 6 ls~~l~gH~~DVr~v~~~~~~-~i~s~sR----d~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D 80 (745)
T KOG0301|consen 6 LSHELEGHKSDVRAVAVTDGV-CIISGSR----DGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMD 80 (745)
T ss_pred eEEEeccCccchheeEecCCe-EEeecCC----CCceeeeeccCcccccceecccCcceeeccceeccccCcceEeeccc
Confidence 457899999999999988765 6888987 8999999987666553 57789998888 89875 33334 5569
Q ss_pred CcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEE
Q 000316 1393 GTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGI 1472 (1678)
Q Consensus 1393 gtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs 1472 (1678)
++|.+|....+.+..++.+|... |+|++...++. +++||
T Consensus 81 ~~i~v~~~~~~~P~~~LkgH~sn----------------------------------------VC~ls~~~~~~-~iSgS 119 (745)
T KOG0301|consen 81 TTIIVFKLSQAEPLYTLKGHKSN----------------------------------------VCSLSIGEDGT-LISGS 119 (745)
T ss_pred ceEEEEecCCCCchhhhhccccc----------------------------------------eeeeecCCcCc-eEecc
Confidence 99999999999998888877532 44555555565 99999
Q ss_pred CCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEec
Q 000316 1473 GNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA 1552 (1678)
Q Consensus 1473 ~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~g 1552 (1678)
+|.|+++|-. +++...+.+ |...|.+++.-+ . +.++|||.|.+|++|.- ++.++++.|
T Consensus 120 WD~TakvW~~--~~l~~~l~g------H~asVWAv~~l~-----------e-~~~vTgsaDKtIklWk~--~~~l~tf~g 177 (745)
T KOG0301|consen 120 WDSTAKVWRI--GELVYSLQG------HTASVWAVASLP-----------E-NTYVTGSADKTIKLWKG--GTLLKTFSG 177 (745)
T ss_pred cccceEEecc--hhhhcccCC------cchheeeeeecC-----------C-CcEEeccCcceeeeccC--Cchhhhhcc
Confidence 9999999976 456666665 455677877642 2 37999999999999985 789999999
Q ss_pred cCCCeEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEEEE--ecCCEEEEEeCCC-eEEEecCCCCCC
Q 000316 1553 HDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFS--VWGQDVISISNNK-IGLSSLSKSADE 1629 (1678)
Q Consensus 1553 H~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~afS--pdg~~LaSgs~D~-I~vwdl~~~~~~ 1629 (1678)
|.+.|+.++--++..++|||.||.|+.|++ ++ ..+.++.||+.-|.+++ .+++.++|++.|+ +++|+.. +
T Consensus 178 HtD~VRgL~vl~~~~flScsNDg~Ir~w~~-~g--e~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~----e 250 (745)
T KOG0301|consen 178 HTDCVRGLAVLDDSHFLSCSNDGSIRLWDL-DG--EVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD----E 250 (745)
T ss_pred chhheeeeEEecCCCeEeecCCceEEEEec-cC--ceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC----c
Confidence 999999999444557899999999999999 45 67789999999999755 6788999999999 9999953 1
Q ss_pred CCcceeccceeeeeecCCCcc-CcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1630 DGQHRLVPQKLYMVDNGAKNL-SVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1630 ~g~~~~~~~kl~~~~~g~~h~-~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
..+.+. +- ..|+++++.++|.+. +|+.||.||||
T Consensus 251 ------~~q~I~-------lPttsiWsa~~L~NgDIv-vg~SDG~VrVf 285 (745)
T KOG0301|consen 251 ------CVQVIT-------LPTTSIWSAKVLLNGDIV-VGGSDGRVRVF 285 (745)
T ss_pred ------eEEEEe-------cCccceEEEEEeeCCCEE-EeccCceEEEE
Confidence 111111 22 368999999888765 68889999998
No 477
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.88 E-value=3.9e-24 Score=232.63 Aligned_cols=197 Identities=18% Similarity=0.230 Sum_probs=157.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHh-hccCCCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSV-PGCLRHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~i-L~~l~HpNIV~ 239 (1678)
.++.+-+..||.|+||+|++-.++ +.|+..|||.|+.... ..+.++++ .|... ++.-+.||||+
T Consensus 63 ~~~Lqdlg~iG~G~fG~V~KM~hk------~sg~~mAVKrIr~~n~-~keq~rll--------~e~d~~mks~~cp~IVk 127 (361)
T KOG1006|consen 63 SDNLQDLGEIGNGAFGTVNKMLHK------PSGKLMAVKRIRSNNI-EKEQKRLL--------MEHDTVMKSSNCPNIVK 127 (361)
T ss_pred cchHHHHHHhcCCcchhhhhhhcC------ccCcEEEEEEeeeccc-hHHHHHHH--------HHHHHHHhhcCCcHHHH
Confidence 456777899999999999998865 7899999999987533 34455555 67765 44557899999
Q ss_pred eeeEEEeCCeEEEeccCCCCCHHHHHhh---CCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCCeEecCCCce
Q 000316 240 VLGLLKTSGLITSVIPKTPYTLENILQF---SPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWS 315 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g~L~~~l~~---~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~g~~ 315 (1678)
+||+...++..+|.||+|+-+|..+.++ -.+..++|..+-.+....+.||.||-. ..|||||+||+|||++..|
T Consensus 128 fyGa~F~EGdcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G-- 205 (361)
T KOG1006|consen 128 FYGALFSEGDCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHG-- 205 (361)
T ss_pred HhhhhhcCCceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCC--
Confidence 9999999999999999999877666543 345678999999999999999999998 6999999999999999999
Q ss_pred eEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc--cccccccccccccCccchhhhHhhhccccCC
Q 000316 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ--SMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1678)
Q Consensus 316 ~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~--~~~y~~~~d~W~~G~isnfeyL~~ln~~aGR 393 (1678)
.+||||||++...... ...+... |-..|||||.+. +..|+-.+|+|+.| ++..+...|+
T Consensus 206 ~vKLCDFGIcGqLv~S----iAkT~da--------GCrpYmAPERi~p~~~gyDiRSDvWSLG-------ITL~EvAtG~ 266 (361)
T KOG1006|consen 206 DVKLCDFGICGQLVDS----IAKTVDA--------GCRPYMAPERIDPSDKGYDIRSDVWSLG-------ITLYEVATGN 266 (361)
T ss_pred CEeeecccchHhHHHH----HHhhhcc--------CCccccChhccCCccCCcchhhhhhhhc-------ceEeeeecCC
Confidence 8999999999865421 1122222 234799999775 44689999999999 6666666775
No 478
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.88 E-value=3.6e-23 Score=241.39 Aligned_cols=204 Identities=17% Similarity=0.192 Sum_probs=171.1
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCC------C
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH------P 235 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~H------p 235 (1678)
.+|.+....|+|-|++|..|.+. ..+..||||+|..+.... +.- ++|++||++|+. -
T Consensus 432 ~RY~V~~~~GkGvFs~Vvra~D~------~r~~~vAiKIIRnNE~M~---KtG--------l~EleiLkKL~~AD~Edk~ 494 (752)
T KOG0670|consen 432 SRYEVQGYTGKGVFSTVVRARDQ------ARGQEVAIKIIRNNEVMH---KTG--------LKELEILKKLNDADPEDKF 494 (752)
T ss_pred ceeEEEeccccceeeeeeecccc------CCCCeeEEEEeecchHHh---hhh--------hHHHHHHHHhhccCchhhh
Confidence 38999999999999999999965 456799999997653222 222 389999999963 4
Q ss_pred cccceeeEEEeCCeEEEeccCCCCCHHHHHhh-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 236 NVAPVLGLLKTSGLITSVIPKTPYTLENILQF-SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 236 NIV~l~~~~~~~~~~~lVmEy~~g~L~~~l~~-~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
|+++|+-.|...+++|||+|-+.-+|.++|+. ..+..+....++.|++|+..||..|-..||+|.||||+|||+++..
T Consensus 495 Hclrl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k- 573 (752)
T KOG0670|consen 495 HCLRLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESK- 573 (752)
T ss_pred HHHHHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCc-
Confidence 89999999999999999999998899999985 3445688899999999999999999999999999999999999876
Q ss_pred eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCC
Q 000316 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1678)
Q Consensus 315 ~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs 394 (1678)
..+||||||.|.+... ...++ +-.+.+|+|||++.+.+|+...|.|+.||-. ||..++--+|.|++
T Consensus 574 ~iLKLCDfGSA~~~~e-----neitP--------YLVSRFYRaPEIiLG~~yd~~iD~WSvgctL-YElYtGkIlFpG~T 639 (752)
T KOG0670|consen 574 NILKLCDFGSASFASE-----NEITP--------YLVSRFYRAPEIILGLPYDYPIDTWSVGCTL-YELYTGKILFPGRT 639 (752)
T ss_pred ceeeeccCcccccccc-----ccccH--------HHHHHhccCcceeecCcccCCccceeeceee-EEeeccceecCCCC
Confidence 4899999999986542 11222 2245689999999999999999999999876 78778888888887
Q ss_pred CCC
Q 000316 395 WGD 397 (1678)
Q Consensus 395 ~~d 397 (1678)
-|+
T Consensus 640 NN~ 642 (752)
T KOG0670|consen 640 NNQ 642 (752)
T ss_pred cHH
Confidence 665
No 479
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.88 E-value=2.4e-22 Score=235.38 Aligned_cols=194 Identities=16% Similarity=0.153 Sum_probs=151.8
Q ss_pred eeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeE
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1678)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~ 243 (1678)
|++.+.||+|+||.||+|.... ...++..+|||.+...........++. +|+++++.++||||++++++
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~---~~~~~~~~aiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~i~~~~~~ 69 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKS---EDGSFQKVAVKMLKADIFSSSDIEEFL--------REAACMKEFDHPNVIKLIGV 69 (273)
T ss_pred CcchhcccCCCCCCEEeeEeec---cCCCceEEEEEEeccccCChHHHHHHH--------HHHHHHhcCCCCCcceEEEE
Confidence 6778899999999999998642 224578999999976544444444554 89999999999999999998
Q ss_pred EEeCC------eEEEeccCCC-CCHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCC
Q 000316 244 LKTSG------LITSVIPKTP-YTLENILQFSP----NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1678)
Q Consensus 244 ~~~~~------~~~lVmEy~~-g~L~~~l~~~~----~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 312 (1678)
+.... ..++++||+. |+|.+++.... ...++...++.++.|++.||+|||++||+||||||+||+++.+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~ 149 (273)
T cd05074 70 SLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNEN 149 (273)
T ss_pred EccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCC
Confidence 86542 3478899998 59988875321 2247888999999999999999999999999999999999998
Q ss_pred CceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 313 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 313 g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+ .+||+|||+++......... . .....+++.|++||.+.+..++.++|+|+.|++.
T Consensus 150 ~--~~kl~dfg~~~~~~~~~~~~------~---~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il 205 (273)
T cd05074 150 M--TVCVADFGLSKKIYSGDYYR------Q---GCASKLPVKWLALESLADNVYTTHSDVWAFGVTM 205 (273)
T ss_pred C--CEEECcccccccccCCccee------c---CCCccCchhhcCHhHHhcCccchhhhhHHHHHHH
Confidence 8 89999999998543211000 0 0011245679999999988999999999999554
No 480
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.88 E-value=3.4e-20 Score=226.08 Aligned_cols=349 Identities=19% Similarity=0.220 Sum_probs=250.4
Q ss_pred eEe-ecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCC
Q 000316 1286 FWF-PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRI 1363 (1678)
Q Consensus 1286 V~~-fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg 1363 (1678)
|.+ +.|..+++ - ++.||.+|.+++||++ ++.+.+++++.+.|+++.=+|-=..++.|.. ||+|.++++..+
T Consensus 162 Ital~HP~TYLN--K-IvvGs~~G~lql~Nvrt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~----~G~ViifNlK~d 234 (910)
T KOG1539|consen 162 ITALLHPSTYLN--K-IVVGSSQGRLQLWNVRTGKVVYTFQEFFSRITAIEQSPALDVVAIGLE----NGTVIIFNLKFD 234 (910)
T ss_pred eeeEecchhhee--e-EEEeecCCcEEEEEeccCcEEEEecccccceeEeccCCcceEEEEecc----CceEEEEEcccC
Confidence 666 77777762 2 8899999999999999 8899999999999999999998889999998 899999999999
Q ss_pred eEEEEEecCCccEEEEeecCCCCcE-EeC--CCcEEEEECCCCceeEEec-ccCcc-ccc----------cCCCCCCcc-
Q 000316 1364 NCVSGYYGHEEVVNDICVLSSSGRI-ASC--DGTLHVWNSQTGKLLSVFA-EQSMD-SLH----------GGSPSSSIS- 1427 (1678)
Q Consensus 1364 ~~l~~l~gH~~~V~sV~fs~~~~~l-aS~--DgtVrIWD~~tg~~~~~l~-~~~~~-~~~----------~~s~s~~~~- 1427 (1678)
+.+.+++.-.+.|++++|..||.-+ +++ .|.+.+||++..+.+.... .|... ... ...++.+..
T Consensus 235 kil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~ 314 (910)
T KOG1539|consen 235 KILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKV 314 (910)
T ss_pred cEEEEEEccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeE
Confidence 9999998445999999998888776 555 6899999999887766555 33111 111 111111111
Q ss_pred -cccccc--cccc-ccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCC-------------------
Q 000316 1428 -KINTDQ--VGML-NSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQ------------------- 1484 (1678)
Q Consensus 1428 -~~~~~~--~~~~-~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~t------------------- 1484 (1678)
+....+ ...+ ...+|+.+..++.|.+. +|..+.+++.|++.+.+++..
T Consensus 315 ~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~---------~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~ 385 (910)
T KOG1539|consen 315 WVFDSGDGVPRLLRSRGGHSAPPSCIRFYGS---------QGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKV 385 (910)
T ss_pred EEeeCCCCcchheeeccCCCCCchheeeecc---------CcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccc
Confidence 111011 1111 12345555555555433 466677777777766665432
Q ss_pred ----------------------------------------------Cee-eEEeeCCCCcccCCCcceEEEeeCCCcccc
Q 000316 1485 ----------------------------------------------GQK-LHLWRGEPTELGFPSLVSAICACGSEKMQA 1517 (1678)
Q Consensus 1485 ----------------------------------------------g~~-l~~l~~~~~~v~~~~~V~sva~~~~~~~s~ 1517 (1678)
... -+.++..... .....+.++|.
T Consensus 386 ~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~-~~~~~~~av~v-------- 456 (910)
T KOG1539|consen 386 NVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFK-KDDINATAVCV-------- 456 (910)
T ss_pred cccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCcccc-ccCcceEEEEE--------
Confidence 110 0111100000 01122333443
Q ss_pred CcccCCCCEEEEEecCCeEEEEeCCCCcEEEEE---eccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCC-------
Q 000316 1518 GGAVASPSWIAAGLSSGQCRLFDVRSGNVIASW---RAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNW------- 1586 (1678)
Q Consensus 1518 dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l---~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~------- 1586 (1678)
++.|++...|++.|+|-+|++.+|-...++ ..|+++|++|+ ..-++.++|++.||.++.||..+..
T Consensus 457 ---s~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l 533 (910)
T KOG1539|consen 457 ---SFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRL 533 (910)
T ss_pred ---eccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeecc
Confidence 356789999999999999999999888888 58999999999 7677899999999999999976532
Q ss_pred --------------------------------CCCCeEeecCCCCEE--EEEecCCEEEEEeCCC-eEEEecCCCCCCCC
Q 000316 1587 --------------------------------PSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKSADEDG 1631 (1678)
Q Consensus 1587 --------------------------------~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g 1631 (1678)
.+.+..+.||++.|+ +|||||++|++++.|+ |++||+....
T Consensus 534 ~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~---- 609 (910)
T KOG1539|consen 534 GSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGT---- 609 (910)
T ss_pred CCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcc----
Confidence 122346778999999 4999999999999999 9999985221
Q ss_pred cceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCC-CcEEEc
Q 000316 1632 QHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTED-GYLRLC 1677 (1678)
Q Consensus 1632 ~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~D-G~IrIw 1677 (1678)
+.... .-..+.+++.|+|+|.+|||...| .-|.+|
T Consensus 610 --------lID~~---~vd~~~~sls~SPngD~LAT~Hvd~~gIylW 645 (910)
T KOG1539|consen 610 --------LIDGL---LVDSPCTSLSFSPNGDFLATVHVDQNGIYLW 645 (910)
T ss_pred --------eeeeE---ecCCcceeeEECCCCCEEEEEEecCceEEEE
Confidence 11111 245688999999999999999998 668888
No 481
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.88 E-value=1.6e-22 Score=234.52 Aligned_cols=184 Identities=16% Similarity=0.117 Sum_probs=144.0
Q ss_pred eeeeeeCcEEEEEEEecCCCCc----cccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeE
Q 000316 168 AFIGICSYSIFEELASNFLSGC----LEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~----~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~ 243 (1678)
+.||+|+||.||+|.+...... ......+++|.+...... ...+. +|+.+|+.++||||++++++
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~---~~~~~--------~e~~~l~~l~h~~i~~~~~~ 69 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD---SLAFF--------ETASLMSQLSHKHLVKLYGV 69 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh---HHHHH--------HHHHHHHcCCCcchhheeeE
Confidence 4799999999999997521100 112245778876543211 33444 89999999999999999999
Q ss_pred EEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc-----eeE
Q 000316 244 LKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-----SWL 317 (1678)
Q Consensus 244 ~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~-----~~l 317 (1678)
+.. ...++||||++ |+|.+++... ...++...+..++.||+.||.|||++||+||||||+|||++.++. ..+
T Consensus 70 ~~~-~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~ 147 (259)
T cd05037 70 CVR-DENIMVEEYVKFGPLDVFLHRE-KNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFI 147 (259)
T ss_pred Eec-CCcEEEEEcCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeE
Confidence 988 77899999999 5999999843 226889999999999999999999999999999999999987652 269
Q ss_pred EEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccc--cccccccccccCccc
Q 000316 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM--DWHSQFNRWWRGELS 379 (1678)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~--~y~~~~d~W~~G~is 379 (1678)
||+|||+++..... ....++..|+|||.+.+. .++.++|+|+.|.+.
T Consensus 148 kl~Dfg~a~~~~~~---------------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~ 196 (259)
T cd05037 148 KLSDPGIPITVLSR---------------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTL 196 (259)
T ss_pred EeCCCCcccccccc---------------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHH
Confidence 99999999864320 011255679999998876 788999999999553
No 482
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.88 E-value=3.7e-21 Score=212.00 Aligned_cols=257 Identities=16% Similarity=0.250 Sum_probs=196.4
Q ss_pred eecCCCCCCCCCeEEEEeCCCCEEEEeCCC--c-eeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCe
Q 000316 1288 FPTPAASWDGPDFLGRVGGLKDESPWKIKA--S-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN 1364 (1678)
Q Consensus 1288 ~fSpdg~~~~~~~LasgS~D~~v~lWd~~~--~-~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~ 1364 (1678)
+|||... .+++.||+|++||+|+++. . .-+....|.++|.+++|+.||..+++|+. |+.+++||+.+++
T Consensus 34 ~FSP~~~----~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~----Dk~~k~wDL~S~Q 105 (347)
T KOG0647|consen 34 AFSPQAD----NLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGC----DKQAKLWDLASGQ 105 (347)
T ss_pred EeccccC----ceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeecc----CCceEEEEccCCC
Confidence 4888222 3488999999999999883 3 23556679999999999999999999998 9999999999994
Q ss_pred EEEEEecCCccEEEEeecCCCC--cE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccC
Q 000316 1365 CVSGYYGHEEVVNDICVLSSSG--RI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSN 1440 (1678)
Q Consensus 1365 ~l~~l~gH~~~V~sV~fs~~~~--~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~ 1440 (1678)
..++..|.++|.+++|.+... .| +|.|+|||.||++...++.++.-+..
T Consensus 106 -~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeR-------------------------- 158 (347)
T KOG0647|consen 106 -VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPER-------------------------- 158 (347)
T ss_pred -eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccce--------------------------
Confidence 556778999999999988766 34 67799999999998888877764321
Q ss_pred CCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcc
Q 000316 1441 TLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGA 1520 (1678)
Q Consensus 1441 ~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~ 1520 (1678)
+.++++- ..+++++..+..|.+|+++.+... ++-+.... .-.++||+...
T Consensus 159 ---------------vYa~Dv~--~pm~vVata~r~i~vynL~n~~te--~k~~~SpL--k~Q~R~va~f~--------- 208 (347)
T KOG0647|consen 159 ---------------VYAADVL--YPMAVVATAERHIAVYNLENPPTE--FKRIESPL--KWQTRCVACFQ--------- 208 (347)
T ss_pred ---------------eeehhcc--CceeEEEecCCcEEEEEcCCCcch--hhhhcCcc--cceeeEEEEEe---------
Confidence 2222221 347889999999999999765432 22222222 22378887652
Q ss_pred cCCCCEEEEEecCCeEEEEeCCCC--cEEEEEeccCC---------CeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCC
Q 000316 1521 VASPSWIAAGLSSGQCRLFDVRSG--NVIASWRAHDG---------YVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPS 1588 (1678)
Q Consensus 1521 ~p~g~~LasGs~Dg~I~lWD~~tg--~~i~~l~gH~~---------~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~ 1588 (1678)
+....|.|+-.|.+.+..+..+ +.-.+|+.|.. .|++|+ +|.-..|+|+|.||++..||-... .
T Consensus 209 --d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar--~ 284 (347)
T KOG0647|consen 209 --DKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDAR--T 284 (347)
T ss_pred --cCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchhh--h
Confidence 3345699999999999999887 44456777763 467777 888889999999999999998765 5
Q ss_pred CCeEeecCCCCEEE--EEecCCEEEEE
Q 000316 1589 QPTVFKGHTNGISG--FSVWGQDVISI 1613 (1678)
Q Consensus 1589 ~~~~l~gH~~~V~a--fSpdg~~LaSg 1613 (1678)
.+.+.+.|..+|.+ |+.+|.++|-+
T Consensus 285 kLk~s~~~~qpItcc~fn~~G~ifaYA 311 (347)
T KOG0647|consen 285 KLKTSETHPQPITCCSFNRNGSIFAYA 311 (347)
T ss_pred hhhccCcCCCccceeEecCCCCEEEEE
Confidence 56677889999984 88888887765
No 483
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.88 E-value=4.5e-21 Score=211.32 Aligned_cols=268 Identities=15% Similarity=0.218 Sum_probs=200.2
Q ss_pred cccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCC-CeEE-EEEecCCccEEEEeecCCCCcE--EeCCCcEEEEEC
Q 000316 1325 AHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR-INCV-SGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNS 1400 (1678)
Q Consensus 1325 gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~t-g~~l-~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~ 1400 (1678)
...++|.+++|||....++++|. ||++||+|++.. |... +....|.++|.+++|+.++..+ ++||+.+++||+
T Consensus 25 pP~DsIS~l~FSP~~~~~~~A~S---WD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL 101 (347)
T KOG0647|consen 25 PPEDSISALAFSPQADNLLAAGS---WDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDL 101 (347)
T ss_pred CcccchheeEeccccCceEEecc---cCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEc
Confidence 46789999999996666665553 799999999976 4433 3345799999999999999887 677999999999
Q ss_pred CCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEE
Q 000316 1401 QTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFI 1480 (1678)
Q Consensus 1401 ~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlW 1480 (1678)
.+++.. .+.. |.++|..+.|-+. .....|++||.|+|||+|
T Consensus 102 ~S~Q~~-~v~~------------------------------Hd~pvkt~~wv~~--------~~~~cl~TGSWDKTlKfW 142 (347)
T KOG0647|consen 102 ASGQVS-QVAA------------------------------HDAPVKTCHWVPG--------MNYQCLVTGSWDKTLKFW 142 (347)
T ss_pred cCCCee-eeee------------------------------cccceeEEEEecC--------CCcceeEecccccceeec
Confidence 999653 3332 3445555555443 113478999999999999
Q ss_pred ECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEE-EEEe-ccCCCeE
Q 000316 1481 DINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVI-ASWR-AHDGYVT 1558 (1678)
Q Consensus 1481 Dl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i-~~l~-gH~~~V~ 1558 (1678)
|.|+..++.++.- +..|.+...- -.+++.+..+..|.+|+++++... +..+ .-+..++
T Consensus 143 D~R~~~pv~t~~L-------PeRvYa~Dv~-------------~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R 202 (347)
T KOG0647|consen 143 DTRSSNPVATLQL-------PERVYAADVL-------------YPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTR 202 (347)
T ss_pred ccCCCCeeeeeec-------cceeeehhcc-------------CceeEEEecCCcEEEEEcCCCcchhhhhcCcccceee
Confidence 9999999888763 3334443321 146888899999999999876322 2221 1234578
Q ss_pred EEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCC-----C-EE-----EEEecCCEEEEEeCCC-eEEEecCC
Q 000316 1559 KLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN-----G-IS-----GFSVWGQDVISISNNK-IGLSSLSK 1625 (1678)
Q Consensus 1559 sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~-----~-V~-----afSpdg~~LaSgs~D~-I~vwdl~~ 1625 (1678)
+|+ ..|....+-||-+|.+.|..+..+.+..-++++.|.. . |. +|.|.-..|+|++.|| ..+||-..
T Consensus 203 ~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkda 282 (347)
T KOG0647|consen 203 CVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDA 282 (347)
T ss_pred EEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchh
Confidence 888 7788777999999999999999876666778999974 2 44 4999999999999999 99999541
Q ss_pred CCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEE
Q 000316 1626 SADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVG 1668 (1678)
Q Consensus 1626 ~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatg 1668 (1678)
.+++... ..|..+|++++|+.+|.+||-+
T Consensus 283 -----------r~kLk~s---~~~~qpItcc~fn~~G~ifaYA 311 (347)
T KOG0647|consen 283 -----------RTKLKTS---ETHPQPITCCSFNRNGSIFAYA 311 (347)
T ss_pred -----------hhhhhcc---CcCCCccceeEecCCCCEEEEE
Confidence 1233221 2478999999999999999866
No 484
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.88 E-value=6.4e-23 Score=245.84 Aligned_cols=202 Identities=17% Similarity=0.168 Sum_probs=167.9
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
-.++.++.++||+|+||+|++|..+-.. .+...||||.++.+.... ...+|+ +|+.+|.+|+|||+|+
T Consensus 108 pee~i~l~e~LG~GsFgvV~rg~Wt~ps---gk~V~VAVKclr~d~l~~-~mddfl--------rEas~M~~L~H~hliR 175 (1039)
T KOG0199|consen 108 PEEQIKLYELLGEGSFGVVKRGTWTQPS---GKHVNVAVKCLRDDSLNA-IMDDFL--------REASHMLKLQHPHLIR 175 (1039)
T ss_pred cHHHHHHHHHhcCcceeeEeeccccCCC---CcEEeEEEEeccCCccch-hHHHHH--------HHHHHHHhccCcceeE
Confidence 3457788999999999999999865422 356789999998765543 455676 9999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
|||+..+ ..+.||||+++ |+|.+.|+......|.......|+.||+.|+.||.++++|||||...|||+.... .||
T Consensus 176 LyGvVl~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllaspr--tVK 252 (1039)
T KOG0199|consen 176 LYGVVLD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPR--TVK 252 (1039)
T ss_pred Eeeeecc-chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccc--eee
Confidence 9999988 77899999999 7999999976777889999999999999999999999999999999999999877 899
Q ss_pred EEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhcccc
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA 391 (1678)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~a 391 (1678)
||||||.|..............+ .-...|.|||-++...++.++|+|..| +++.++|+
T Consensus 253 I~DFGLmRaLg~ned~Yvm~p~r--------kvPfAWCaPEsLrh~kFShaSDvWmyG-------VTiWEMFt 310 (1039)
T KOG0199|consen 253 ICDFGLMRALGENEDMYVMAPQR--------KVPFAWCAPESLRHRKFSHASDVWMYG-------VTIWEMFT 310 (1039)
T ss_pred eecccceeccCCCCcceEecCCC--------cCcccccCHhHhccccccccchhhhhh-------hhHHhhhc
Confidence 99999999876544333211111 124468999999999999999999999 55555554
No 485
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.88 E-value=2.2e-21 Score=225.82 Aligned_cols=259 Identities=18% Similarity=0.231 Sum_probs=201.4
Q ss_pred eecCCCCCCCCCeEEEEeCCCCEEEEeCCC-ceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEE
Q 000316 1288 FPTPAASWDGPDFLGRVGGLKDESPWKIKA-SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCV 1366 (1678)
Q Consensus 1288 ~fSpdg~~~~~~~LasgS~D~~v~lWd~~~-~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l 1366 (1678)
+|||.-.+ ++.+|+| ..+.|++..+ ...+++.--.+.|.+++|-.||+.+++|.. .|.|+|+|..+...+
T Consensus 33 ~fsp~~P~---d~aVt~S--~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~----sG~V~vfD~k~r~iL 103 (487)
T KOG0310|consen 33 CFSPKHPY---DFAVTSS--VRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDE----SGHVKVFDMKSRVIL 103 (487)
T ss_pred ecCCCCCC---ceEEecc--cEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCC----cCcEEEeccccHHHH
Confidence 48887665 4344444 5688999773 456667777899999999999999999887 799999998776778
Q ss_pred EEEecCCccEEEEeecCCCCcE---EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCC
Q 000316 1367 SGYYGHEEVVNDICVLSSSGRI---ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLS 1443 (1678)
Q Consensus 1367 ~~l~gH~~~V~sV~fs~~~~~l---aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s 1443 (1678)
..+.+|+.+|..+.|+|.+..+ ++.|+.+++||+.++.....+.+|.
T Consensus 104 R~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~ht------------------------------ 153 (487)
T KOG0310|consen 104 RQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHT------------------------------ 153 (487)
T ss_pred HHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCc------------------------------
Confidence 8899999999999999987776 4448999999999887533454432
Q ss_pred CCeEEeeecCCceeEeEeecC-CCEEEEEECCCcEEEEECCCC-eeeEEeeCCCCcccCCCcceEEEeeCCCccccCccc
Q 000316 1444 SGILSTAFDGNLYTCLHHIEC-VERLVVGIGNGSLRFIDINQG-QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAV 1521 (1678)
Q Consensus 1444 ~~v~sv~f~~~~vt~va~sp~-g~~Lasgs~DgtVrlWDl~tg-~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~ 1521 (1678)
+.|.|.+++|. +..+++|+.||+||+||+++. ..+.++. |...|..|++-
T Consensus 154 ----------DYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~eln-------hg~pVe~vl~l----------- 205 (487)
T KOG0310|consen 154 ----------DYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELN-------HGCPVESVLAL----------- 205 (487)
T ss_pred ----------ceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEec-------CCCceeeEEEc-----------
Confidence 34556666654 457899999999999999986 5555554 45568888875
Q ss_pred CCCCEEEEEecCCeEEEEeCCCCc-EEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCC
Q 000316 1522 ASPSWIAAGLSSGQCRLFDVRSGN-VIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNG 1599 (1678)
Q Consensus 1522 p~g~~LasGs~Dg~I~lWD~~tg~-~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~ 1599 (1678)
|+|..+|+++. ..|++||+-+|. .+.....|...|+|+. ..+++.|+|||.|+.|++||+.+- +.+..++ ..++
T Consensus 206 psgs~iasAgG-n~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~--Kvv~s~~-~~~p 281 (487)
T KOG0310|consen 206 PSGSLIASAGG-NSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNY--KVVHSWK-YPGP 281 (487)
T ss_pred CCCCEEEEcCC-CeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccce--EEEEeee-cccc
Confidence 45568888775 589999999765 4455555999999999 778999999999999999997664 3334443 3556
Q ss_pred EE--EEEecCCEEEEEeCCC
Q 000316 1600 IS--GFSVWGQDVISISNNK 1617 (1678)
Q Consensus 1600 V~--afSpdg~~LaSgs~D~ 1617 (1678)
|. +++|+++.++.|..||
T Consensus 282 vLsiavs~dd~t~viGmsnG 301 (487)
T KOG0310|consen 282 VLSIAVSPDDQTVVIGMSNG 301 (487)
T ss_pred eeeEEecCCCceEEEecccc
Confidence 66 5999999999999999
No 486
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.87 E-value=6.6e-21 Score=228.37 Aligned_cols=334 Identities=16% Similarity=0.199 Sum_probs=231.3
Q ss_pred cccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC--C--------------------ceeE----------
Q 000316 1276 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK--A--------------------SILS---------- 1321 (1678)
Q Consensus 1276 ~~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~--~--------------------~~l~---------- 1321 (1678)
...+.||+|||.+ |+.-|. +..+|||+|.|..||||.+. + ..+.
T Consensus 184 v~el~GH~DWIrsl~f~~~~~--~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~ea 261 (764)
T KOG1063|consen 184 VAELEGHTDWIRSLAFARLGG--DDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEA 261 (764)
T ss_pred EEEeeccchhhhhhhhhccCC--CcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhh
Confidence 4578999999987 443333 24569999999999999965 2 1121
Q ss_pred EeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCC--e-----EEEEEecCCccEEEEeecCCCCcE-EeC-C
Q 000316 1322 SIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRI--N-----CVSGYYGHEEVVNDICVLSSSGRI-ASC-D 1392 (1678)
Q Consensus 1322 tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg--~-----~l~~l~gH~~~V~sV~fs~~~~~l-aS~-D 1392 (1678)
.+.||.+.|.++.|+|.+..|+|+|+ |+++.+|.-.+. - ++....|....-+++.|++++..+ +.+ -
T Consensus 262 ll~GHeDWV~sv~W~p~~~~LLSASa----DksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~ 337 (764)
T KOG1063|consen 262 LLMGHEDWVYSVWWHPEGLDLLSASA----DKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRT 337 (764)
T ss_pred hhcCcccceEEEEEccchhhheeccc----CcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEeccc
Confidence 23499999999999999999999998 999999986543 2 223334455678899999998777 433 8
Q ss_pred CcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEE
Q 000316 1393 GTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGI 1472 (1678)
Q Consensus 1393 gtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs 1472 (1678)
|..++|....... .+.. ....+|...|..+ ++.|.|.++++++
T Consensus 338 Gg~hlWkt~d~~~-w~~~--------------------------~~iSGH~~~V~dv----------~W~psGeflLsvs 380 (764)
T KOG1063|consen 338 GGFHLWKTKDKTF-WTQE--------------------------PVISGHVDGVKDV----------DWDPSGEFLLSVS 380 (764)
T ss_pred CcEEEEeccCccc-eeec--------------------------cccccccccceee----------eecCCCCEEEEec
Confidence 9999998332211 1111 0112344444444 4555699999999
Q ss_pred CCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCC----------
Q 000316 1473 GNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVR---------- 1542 (1678)
Q Consensus 1473 ~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~---------- 1542 (1678)
.|.|-|++-.- |+... |..-..+.-|.-..+|+++.+. ...+++|.+...+|+|+.-
T Consensus 381 ~DQTTRlFa~w-g~q~~-wHEiaRPQiHGyDl~c~~~vn~-----------~~~FVSgAdEKVlRvF~aPk~fv~~l~~i 447 (764)
T KOG1063|consen 381 LDQTTRLFARW-GRQQE-WHEIARPQIHGYDLTCLSFVNE-----------DLQFVSGADEKVLRVFEAPKSFVKSLMAI 447 (764)
T ss_pred cccceeeeccc-ccccc-eeeecccccccccceeeehccC-----------CceeeecccceeeeeecCcHHHHHHHHHH
Confidence 99999998654 22221 2111111124444566665431 1245555555555555431
Q ss_pred ---------------------------------CCc---------------------------------EEEEEeccCCC
Q 000316 1543 ---------------------------------SGN---------------------------------VIASWRAHDGY 1556 (1678)
Q Consensus 1543 ---------------------------------tg~---------------------------------~i~~l~gH~~~ 1556 (1678)
+|. .+.++-||...
T Consensus 448 ~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyE 527 (764)
T KOG1063|consen 448 CGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYE 527 (764)
T ss_pred hCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHhccCcee
Confidence 111 11223478889
Q ss_pred eEEEE-cCCCCEEEEEeCCC-----cEEEEEcCCCCCCCCeEeecCCCCEE--EEEecCCEEEEEeCCC-eEEEecCCCC
Q 000316 1557 VTKLA-APEDHLLVSSSLDK-----TLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKSA 1627 (1678)
Q Consensus 1557 V~sva-spdg~~LaSgS~Dg-----tI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~~~ 1627 (1678)
|.+++ +|+++++||++... -|++|+..+. .+...+.+|+-.|+ +|||||++|+++|.|+ +.+|......
T Consensus 528 v~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W--~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~ 605 (764)
T KOG1063|consen 528 VYALAISPTGNLIASACKSSLKEHAVIRLWNTANW--LQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDI 605 (764)
T ss_pred EEEEEecCCCCEEeehhhhCCccceEEEEEeccch--hhhheecccceEEEEEEECCCCcEEEEeecCceEEeeeeeccc
Confidence 99999 99999999998654 4899998876 55668999999999 6999999999999999 9999975211
Q ss_pred CCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1628 DEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1628 ~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
....+ +. ....|...|.+++|+||++.|||||.|.+|++|
T Consensus 606 --~~e~~------fa--~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW 645 (764)
T KOG1063|consen 606 --KDEFR------FA--CLKAHTRIIWDCSWSPDEKYFATASRDKKVKVW 645 (764)
T ss_pred --chhhh------hc--cccccceEEEEcccCcccceeEEecCCceEEEE
Confidence 11111 11 123588999999999999999999999999999
No 487
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.87 E-value=5.8e-22 Score=234.49 Aligned_cols=192 Identities=16% Similarity=0.118 Sum_probs=153.4
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH--HHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ--ESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~--~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
+|++.+.||+|+||.||++++.. ...++..+|+|.+++...... ....+. +|+.+++.+ +||||++
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~---~~~~~~~~avk~~~~~~~~~~~~~~~~~~--------~E~~~l~~~~~~~~i~~ 69 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVG---GHDAGKLYAMKVLKKATIVQKAKTAEHTR--------TERQVLEAVRRCPFLVT 69 (288)
T ss_pred CceEEEEeccCCCceEEEEEEec---cccCCcEEEEEEEehHHHHhhhhHHHHHH--------HHHHHHHhccCCcchhh
Confidence 48899999999999999998532 234678899999875322211 112222 899999999 5999999
Q ss_pred eeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
+++.+..+...|+||||+++ +|.+++. ....+++..++.++.|++.||.|||++|++||||||+||+++.++ .+|
T Consensus 70 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~--~~~ 145 (288)
T cd05583 70 LHYAFQTDTKLHLILDYVNGGELFTHLY--QREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEG--HVV 145 (288)
T ss_pred hheeeecCCEEEEEEecCCCCcHHHHHh--hcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEE
Confidence 99999999999999999985 9999987 345689999999999999999999999999999999999999998 899
Q ss_pred EEecCCcccCCCCCcccccCCCCcceeecccccCccccccccccccc--ccccccccccCccc
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD--WHSQFNRWWRGELS 379 (1678)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~--y~~~~d~W~~G~is 379 (1678)
|+|||+++........ ......++..|+|||.+.+.. .+..+|+|+.|.+.
T Consensus 146 l~dfg~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il 198 (288)
T cd05583 146 LTDFGLSKEFLAEEEE----------RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLT 198 (288)
T ss_pred EEECcccccccccccc----------ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHH
Confidence 9999998754321100 011123678899999887654 67899999999553
No 488
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.87 E-value=2.9e-22 Score=234.11 Aligned_cols=194 Identities=18% Similarity=0.166 Sum_probs=150.2
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeC
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~ 247 (1678)
+.||+|+||.||+|+..-.......+..+|+|.+... .......++. +|+.+++.++||||+++++++...
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~~~~~~ 71 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKG-ATDQEKKEFL--------KEAHLMSNFNHPNIVKLLGVCLLN 71 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcc-cchhhHHHHH--------HHHHHHHhcCCCCeeeEeeeecCC
Confidence 3699999999999986432211234578999998653 2222334444 899999999999999999999999
Q ss_pred CeEEEeccCCC-CCHHHHHhhC-----CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC---ceeEE
Q 000316 248 GLITSVIPKTP-YTLENILQFS-----PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC---WSWLY 318 (1678)
Q Consensus 248 ~~~~lVmEy~~-g~L~~~l~~~-----~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g---~~~lK 318 (1678)
+..++||||++ ++|.+++... ....++...+..++.|++.||.|||+++++||||||+||+++.++ ...+|
T Consensus 72 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~ 151 (269)
T cd05044 72 EPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVK 151 (269)
T ss_pred CCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceE
Confidence 99999999998 4999999742 223478889999999999999999999999999999999998754 12699
Q ss_pred EEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|+|||+++........... ....++..|+|||.+.+..++.+.|+|+.|.|.
T Consensus 152 l~dfg~~~~~~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 203 (269)
T cd05044 152 IGDFGLARDIYKSDYYRKE---------GEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLM 203 (269)
T ss_pred ECCcccccccccccccccC---------cccCCCccccCHHHHccCCcccchhHHHHHHHH
Confidence 9999999854321111000 011245679999999999999999999999664
No 489
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.87 E-value=9.3e-21 Score=229.44 Aligned_cols=258 Identities=16% Similarity=0.207 Sum_probs=210.9
Q ss_pred EEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEec-CCccEEE
Q 000316 1301 LGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYG-HEEVVND 1378 (1678)
Q Consensus 1301 LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~g-H~~~V~s 1378 (1678)
+|.|.+ ..|.+|+.. +........+.+.|++|.|+++|++|+.|.. +|+|.|||..+.+.+.++.+ |...|-+
T Consensus 191 laValg-~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~----~g~v~iwD~~~~k~~~~~~~~h~~rvg~ 265 (484)
T KOG0305|consen 191 LAVALG-QSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTS----DGTVQIWDVKEQKKTRTLRGSHASRVGS 265 (484)
T ss_pred EEEEec-ceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeec----CCeEEEEehhhccccccccCCcCceeEE
Confidence 666654 569999988 4444444445899999999999999999998 89999999999999999998 9999999
Q ss_pred EeecCCCCcE--EeCCCcEEEEECCCCceeEE-ecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCc
Q 000316 1379 ICVLSSSGRI--ASCDGTLHVWNSQTGKLLSV-FAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNL 1455 (1678)
Q Consensus 1379 V~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~-l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~ 1455 (1678)
++|. +..+ ++.|+.|.++|++..+.... +.+| ...
T Consensus 266 laW~--~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H------------------------------~qe---------- 303 (484)
T KOG0305|consen 266 LAWN--SSVLSSGSRDGKILNHDVRISQHVVSTLQGH------------------------------RQE---------- 303 (484)
T ss_pred Eecc--CceEEEecCCCcEEEEEEecchhhhhhhhcc------------------------------cce----------
Confidence 9996 3333 66799999999998765433 3222 223
Q ss_pred eeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEe--cC
Q 000316 1456 YTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGL--SS 1533 (1678)
Q Consensus 1456 vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs--~D 1533 (1678)
|..+.+++++.++|+|+.|+.+.|||..+.+++..+..| ...|.+++|||... ++||+|+ .|
T Consensus 304 VCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H------~aAVKA~awcP~q~----------~lLAsGGGs~D 367 (484)
T KOG0305|consen 304 VCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEH------TAAVKALAWCPWQS----------GLLATGGGSAD 367 (484)
T ss_pred eeeeEECCCCCeeccCCCccceEeccCCCccccEEEecc------ceeeeEeeeCCCcc----------CceEEcCCCcc
Confidence 555666678999999999999999999888888888754 55699999998543 6899864 69
Q ss_pred CeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEE--EeCCCcEEEEEcCCCCCCCCeEeecCCCCEE--EEEecCC
Q 000316 1534 GQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVS--SSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQ 1608 (1678)
Q Consensus 1534 g~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaS--gS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~ 1608 (1678)
++|++||+.+|+.+..+.. ...|.+|. ++..+-|++ |-.++.|.||+..+. ..+..+.||+..|. ++||||.
T Consensus 368 ~~i~fwn~~~g~~i~~vdt-gsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~--~~~~~l~gH~~RVl~la~SPdg~ 444 (484)
T KOG0305|consen 368 RCIKFWNTNTGARIDSVDT-GSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSM--KLVAELLGHTSRVLYLALSPDGE 444 (484)
T ss_pred cEEEEEEcCCCcEeccccc-CCceeeEEEcCCCCEEEEecCCCCCcEEEEecccc--ceeeeecCCcceeEEEEECCCCC
Confidence 9999999999999988874 46788898 777765555 335778999999886 66789999999999 5999999
Q ss_pred EEEEEeCCC-eEEEecC
Q 000316 1609 DVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1609 ~LaSgs~D~-I~vwdl~ 1624 (1678)
.+++|+.|. +++|++-
T Consensus 445 ~i~t~a~DETlrfw~~f 461 (484)
T KOG0305|consen 445 TIVTGAADETLRFWNLF 461 (484)
T ss_pred EEEEecccCcEEecccc
Confidence 999999998 9999985
No 490
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.87 E-value=1.5e-20 Score=203.58 Aligned_cols=268 Identities=14% Similarity=0.108 Sum_probs=211.9
Q ss_pred ccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCCC-cee--EEeccccccEEEEEEecCC-CEEEEEecCCCCC
Q 000316 1279 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKA-SIL--SSIRAHHGALRSVAVGQDE-CTVFTAGIGPGFK 1352 (1678)
Q Consensus 1279 l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~~-~~l--~tl~gH~~~V~svafspdg-~~LaSgS~d~~~D 1352 (1678)
+.+|...|.+ ++.+|.. |++||.|+++++|++++ ..+ ...+||++.|-.++|+|.. ..+++++. |
T Consensus 16 ~~~~~~~v~Sv~wn~~g~~-----lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~----d 86 (313)
T KOG1407|consen 16 LQGHVQKVHSVAWNCDGTK-----LASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASG----D 86 (313)
T ss_pred hhhhhhcceEEEEcccCce-----eeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecC----C
Confidence 3445555554 7777876 99999999999999983 333 3567999999999999864 68888887 8
Q ss_pred CeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccc
Q 000316 1353 GTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKIN 1430 (1678)
Q Consensus 1353 gtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~ 1430 (1678)
++||+||..+++|......-.+.++ +.|+|+++++ +..|..|.+.|.++-+.+...+..
T Consensus 87 k~ir~wd~r~~k~~~~i~~~~eni~-i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~------------------ 147 (313)
T KOG1407|consen 87 KTIRIWDIRSGKCTARIETKGENIN-ITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFK------------------ 147 (313)
T ss_pred ceEEEEEeccCcEEEEeeccCcceE-EEEcCCCCEEEEecCcccEEEEEecccceeehhccc------------------
Confidence 9999999999999998876666655 6789999998 334999999999987766544321
Q ss_pred cccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEee
Q 000316 1431 TDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICAC 1510 (1678)
Q Consensus 1431 ~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~ 1510 (1678)
..+..++| +.+++++...++.|+|.|......+++.+++.|. +...||.|+
T Consensus 148 -------------~e~ne~~w----------~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~------snCicI~f~ 198 (313)
T KOG1407|consen 148 -------------FEVNEISW----------NNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHP------SNCICIEFD 198 (313)
T ss_pred -------------ceeeeeee----------cCCCCEEEEecCCceEEEEeccccccccccccCC------cceEEEEEC
Confidence 12223333 3357788877888999999998889998888654 223344443
Q ss_pred CCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCC
Q 000316 1511 GSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQ 1589 (1678)
Q Consensus 1511 ~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~ 1589 (1678)
|+|+++|+|+.|..+.+||+...-+++.+..++-+|+.+. +.||++|||||.|..|-|=++.+| ..
T Consensus 199 -----------p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetG--d~ 265 (313)
T KOG1407|consen 199 -----------PDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETG--DR 265 (313)
T ss_pred -----------CCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeEecccC--Ce
Confidence 5668999999999999999999999999999999999999 999999999999999999999999 56
Q ss_pred CeEeecCCCCEE--EEEecCCEEEEEeCCC
Q 000316 1590 PTVFKGHTNGIS--GFSVWGQDVISISNNK 1617 (1678)
Q Consensus 1590 ~~~l~gH~~~V~--afSpdg~~LaSgs~D~ 1617 (1678)
++.++. .++.. +|+|...+||-+++|+
T Consensus 266 ~~eI~~-~~~t~tVAWHPk~~LLAyA~ddk 294 (313)
T KOG1407|consen 266 VWEIPC-EGPTFTVAWHPKRPLLAYACDDK 294 (313)
T ss_pred EEEeec-cCCceeEEecCCCceeeEEecCC
Confidence 666654 33333 7999999999888765
No 491
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.87 E-value=1.1e-22 Score=239.57 Aligned_cols=187 Identities=17% Similarity=0.150 Sum_probs=160.2
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+.+...+||-|.||.||.+..+. -...||||.++.+ .-...+|+ .|..+|+.++|||+|+|++
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKk------yslTvAVKtLKED---tMeveEFL--------kEAAvMKeikHpNLVqLLG 330 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKK------YSLTVAVKTLKED---TMEVEEFL--------KEAAVMKEIKHPNLVQLLG 330 (1157)
T ss_pred heeeeeccCCCcccceeeeeeec------cceeeehhhhhhc---chhHHHHH--------HHHHHHHhhcCccHHHHhh
Confidence 45567899999999999999763 4567999999754 34456788 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
+|..+..+|||.|||. |+|.++|+...+..++.-...+++.||..|++||..++.|||||...|.|+.++. .+||+|
T Consensus 331 VCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnh--iVKvAD 408 (1157)
T KOG4278|consen 331 VCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH--IVKVAD 408 (1157)
T ss_pred hhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccc--eEEeec
Confidence 9999999999999999 7999999987777788888899999999999999999999999999999999999 999999
Q ss_pred cCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCcc
Q 000316 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1678)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~i 378 (1678)
|||+|.+.....+...+.. =..-|.|||-+.-..++.+.|+|.+|.+
T Consensus 409 FGLsRlMtgDTYTAHAGAK----------FPIKWTAPEsLAyNtFSiKSDVWAFGVL 455 (1157)
T KOG4278|consen 409 FGLSRLMTGDTYTAHAGAK----------FPIKWTAPESLAYNTFSIKSDVWAFGVL 455 (1157)
T ss_pred cchhhhhcCCceecccCcc----------CcccccCcccccccccccchhhHHHHHH
Confidence 9999987754433322211 1345889999988888999999999955
No 492
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.87 E-value=2.7e-22 Score=237.65 Aligned_cols=190 Identities=15% Similarity=0.180 Sum_probs=155.4
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
..++.+.||+|.||.||+|.....+ .....-||||..+.+.. ....+.|+ .|.-+|+.++|||||+|+|
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~--kge~iaVAvKtCK~d~t-~d~tekfl--------qEa~iMrnfdHphIikLIG 458 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPE--KGERIAVAVKTCKTDCT-PDDTEKFL--------QEASIMRNFDHPHIIKLIG 458 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccc--cCcceeeeeehhccCCC-hhhHHHHH--------HHHHHHHhCCCcchhheee
Confidence 3455789999999999999965331 12345599999987533 34467777 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++.+ ...+||||.++ |.|..+++. +...++......|++||+.||+|||+++.|||||...|||+.... -+||+|
T Consensus 459 v~~e-~P~WivmEL~~~GELr~yLq~-nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~--CVKLaD 534 (974)
T KOG4257|consen 459 VCVE-QPMWIVMELAPLGELREYLQQ-NKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQ--CVKLAD 534 (974)
T ss_pred eeec-cceeEEEecccchhHHHHHHh-ccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcc--eeeecc
Confidence 9975 56899999999 899999994 455688888899999999999999999999999999999999988 799999
Q ss_pred cCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCc
Q 000316 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGE 377 (1678)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~ 377 (1678)
||++|........... ... -..-|||||-+.-..++.++|+|.+|.
T Consensus 535 FGLSR~~ed~~yYkaS-~~k---------LPIKWmaPESINfRrFTtASDVWMFgV 580 (974)
T KOG4257|consen 535 FGLSRYLEDDAYYKAS-RGK---------LPIKWMAPESINFRRFTTASDVWMFGV 580 (974)
T ss_pred cchhhhccccchhhcc-ccc---------cceeecCccccchhcccchhhHHHHHH
Confidence 9999987644322111 111 234699999999999999999999994
No 493
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.87 E-value=1e-20 Score=218.57 Aligned_cols=280 Identities=18% Similarity=0.273 Sum_probs=211.2
Q ss_pred ccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC-Ccee-----------------EEe-ccccccEEEEEE
Q 000316 1277 SNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASIL-----------------SSI-RAHHGALRSVAV 1335 (1678)
Q Consensus 1277 ~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l-----------------~tl-~gH~~~V~svaf 1335 (1678)
.....|.-.|.+ ++||+++ ..++|.|++|.-|++. |... +.- ++|...|.+++.
T Consensus 136 ~~~~~H~~s~~~vals~d~~~-----~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~av 210 (479)
T KOG0299|consen 136 RVIGKHQLSVTSVALSPDDKR-----VFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAV 210 (479)
T ss_pred eeeccccCcceEEEeeccccc-----eeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEE
Confidence 334556666664 8999987 8999999999999976 3211 111 389999999999
Q ss_pred ecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEecccC
Q 000316 1336 GQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQS 1413 (1678)
Q Consensus 1336 spdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~ 1413 (1678)
|+||++|++|+. |..|.|||..|.+.++.++||.+.|.+++|-.....+ +|.|++|++|+++.-..+.++-+|.
T Consensus 211 S~Dgkylatgg~----d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHq 286 (479)
T KOG0299|consen 211 SSDGKYLATGGR----DRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQ 286 (479)
T ss_pred cCCCcEEEecCC----CceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCc
Confidence 999999999997 8999999999999999999999999999997655555 6669999999998776666665543
Q ss_pred ccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeC
Q 000316 1414 MDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRG 1493 (1678)
Q Consensus 1414 ~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~ 1493 (1678)
. .|.++ ....-++.+-+|+.|.++++|++.. +....+.+
T Consensus 287 d------------------------------~v~~I----------daL~reR~vtVGgrDrT~rlwKi~e-esqlifrg 325 (479)
T KOG0299|consen 287 D------------------------------GVLGI----------DALSRERCVTVGGRDRTVRLWKIPE-ESQLIFRG 325 (479)
T ss_pred c------------------------------ceeee----------chhcccceEEeccccceeEEEeccc-cceeeeeC
Confidence 2 22222 2222355666777999999999953 33334554
Q ss_pred CCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEe-cc-----------CCCeEEEE
Q 000316 1494 EPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR-AH-----------DGYVTKLA 1561 (1678)
Q Consensus 1494 ~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~-gH-----------~~~V~sva 1561 (1678)
+ .+.+.|+||- +...+++||+||.|.+|++.+.+++.+.+ +| ..+|++|+
T Consensus 326 ~------~~sidcv~~I------------n~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla 387 (479)
T KOG0299|consen 326 G------EGSIDCVAFI------------NDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLA 387 (479)
T ss_pred C------CCCeeeEEEe------------cccceeeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeE
Confidence 3 4457888884 34679999999999999999988887664 23 12899999
Q ss_pred -cCCCCEEEEEeCCCcEEEEEcCCCC--CCCCeEeecCCCCEE--EEEecCCEEEEE-eCCC-eEEEecCC
Q 000316 1562 -APEDHLLVSSSLDKTLRIWDLRRNW--PSQPTVFKGHTNGIS--GFSVWGQDVISI-SNNK-IGLSSLSK 1625 (1678)
Q Consensus 1562 -spdg~~LaSgS~DgtI~IWDl~~~~--~~~~~~l~gH~~~V~--afSpdg~~LaSg-s~D~-I~vwdl~~ 1625 (1678)
.|...++||||.+|.|++|-+..+. ...+..+. -.+-|+ +|+.+|+.+++| +... +.-|-...
T Consensus 388 ~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls-~~GfVNsl~f~~sgk~ivagiGkEhRlGRW~~~k 457 (479)
T KOG0299|consen 388 VIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLS-LVGFVNSLAFSNSGKRIVAGIGKEHRLGRWWCLK 457 (479)
T ss_pred ecccCceEEecCCCCceEEEEecCCccccceeeecc-cccEEEEEEEccCCCEEEEecccccccceeeEee
Confidence 8899999999999999999999873 22333333 445666 489999977665 4444 77777643
No 494
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.86 E-value=1.2e-21 Score=231.42 Aligned_cols=188 Identities=13% Similarity=0.156 Sum_probs=157.3
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.+.|+..+.||+|+||.||+|.+. .++..+++|.+..... ....+. +|+.+++.++|+||+++
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~---~~~~~~--------~e~~~l~~l~~~~i~~~ 80 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDR------ATGKEVAIKKMRLRKQ---NKELII--------NEILIMKDCKHPNIVDY 80 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEc------cCCcEEEEEEEecCch---hHHHHH--------HHHHHHHHCCCCCeeEE
Confidence 556999999999999999999964 3578899999875432 233344 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++...+..|+|+||++ ++|.+++.... ..++...+..++.|++.||.|||++||+|+||||+||+++.++ .+||
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~--~~~l 157 (286)
T cd06614 81 YDSYLVGDELWVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDG--SVKL 157 (286)
T ss_pred EEEEEECCEEEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCC--CEEE
Confidence 999999999999999999 59999998432 3789999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||++........ . .....++..|++||++.+..++.++|+|+.|.|.
T Consensus 158 ~d~~~~~~~~~~~~-----~------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil 206 (286)
T cd06614 158 ADFGFAAQLTKEKS-----K------RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMC 206 (286)
T ss_pred Cccchhhhhccchh-----h------hccccCCcccCCHhHhcCCCCCCccccHHHHHHH
Confidence 99999874332110 0 0112357789999999988999999999999654
No 495
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.86 E-value=1.6e-20 Score=217.09 Aligned_cols=274 Identities=21% Similarity=0.278 Sum_probs=209.5
Q ss_pred eEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEE----E-------------E-ecCCccEEEEee
Q 000316 1320 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVS----G-------------Y-YGHEEVVNDICV 1381 (1678)
Q Consensus 1320 l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~----~-------------l-~gH~~~V~sV~f 1381 (1678)
+..+..|.-+|.||+++||++++++++. |++|.-|++.+|+... . - ++|...|.+++.
T Consensus 135 ~~~~~~H~~s~~~vals~d~~~~fsask----~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~av 210 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDDKRVFSASK----DGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAV 210 (479)
T ss_pred ceeeccccCcceEEEeeccccceeecCC----CcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEE
Confidence 5667889999999999999999999998 8999999998876320 0 1 379999999999
Q ss_pred cCCCCcEEeC--CCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEe
Q 000316 1382 LSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCL 1459 (1678)
Q Consensus 1382 s~~~~~laS~--DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v 1459 (1678)
++++.+++++ |..|.|||+++.+.++++.+|. +.|.+++|.
T Consensus 211 S~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr------------------------------~~V~~L~fr------- 253 (479)
T KOG0299|consen 211 SSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHR------------------------------GAVSSLAFR------- 253 (479)
T ss_pred cCCCcEEEecCCCceEEEecCcccchhhcccccc------------------------------cceeeeeee-------
Confidence 9999999776 9999999999999888877653 334455554
Q ss_pred EeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEE
Q 000316 1460 HHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLF 1539 (1678)
Q Consensus 1460 a~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lW 1539 (1678)
.....+++++.|.+|++|++.....+.++-+|++ .|..|... .-+..+-+|+.|+++++|
T Consensus 254 ---~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd------~v~~IdaL-----------~reR~vtVGgrDrT~rlw 313 (479)
T KOG0299|consen 254 ---KGTSELYSASADRSVKVWSIDQLSYVETLYGHQD------GVLGIDAL-----------SRERCVTVGGRDRTVRLW 313 (479)
T ss_pred ---cCccceeeeecCCceEEEehhHhHHHHHHhCCcc------ceeeechh-----------cccceEEeccccceeEEE
Confidence 3467899999999999999998888888876654 35555432 123456667799999999
Q ss_pred eCCCCcEEEEEeccCCCeEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEee-cC-----------CCCEEE--EEe
Q 000316 1540 DVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFK-GH-----------TNGISG--FSV 1605 (1678)
Q Consensus 1540 D~~tg~~i~~l~gH~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~-gH-----------~~~V~a--fSp 1605 (1678)
++. -+..-.+.+|.+.+-|++.-+...++|||.||+|.+|++.+.++ +++.+ .| ..+|++ ..|
T Consensus 314 Ki~-eesqlifrg~~~sidcv~~In~~HfvsGSdnG~IaLWs~~KKkp--lf~~~~AHgv~~~~~~~~~~~Witsla~i~ 390 (479)
T KOG0299|consen 314 KIP-EESQLIFRGGEGSIDCVAFINDEHFVSGSDNGSIALWSLLKKKP--LFTSRLAHGVIPELDPVNGNFWITSLAVIP 390 (479)
T ss_pred ecc-ccceeeeeCCCCCeeeEEEecccceeeccCCceEEEeeecccCc--eeEeeccccccCCccccccccceeeeEecc
Confidence 994 34444678899999999977788999999999999999988743 33221 11 126664 778
Q ss_pred cCCEEEEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEE
Q 000316 1606 WGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVG 1668 (1678)
Q Consensus 1606 dg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatg 1668 (1678)
...++||||.+| |++|.++. |.- ...-+++. ...+.|++++|+++|+.+++|
T Consensus 391 ~sdL~asGS~~G~vrLW~i~~-----g~r--~i~~l~~l----s~~GfVNsl~f~~sgk~ivag 443 (479)
T KOG0299|consen 391 GSDLLASGSWSGCVRLWKIED-----GLR--AINLLYSL----SLVGFVNSLAFSNSGKRIVAG 443 (479)
T ss_pred cCceEEecCCCCceEEEEecC-----Ccc--ccceeeec----ccccEEEEEEEccCCCEEEEe
Confidence 899999999999 99999862 211 11112221 245789999999999965555
No 496
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.86 E-value=3.1e-20 Score=205.04 Aligned_cols=292 Identities=15% Similarity=0.204 Sum_probs=196.0
Q ss_pred eEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCe-----EEEE-EecCCccEEEEeecCCCCcE-EeC-
Q 000316 1320 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN-----CVSG-YYGHEEVVNDICVLSSSGRI-ASC- 1391 (1678)
Q Consensus 1320 l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~-----~l~~-l~gH~~~V~sV~fs~~~~~l-aS~- 1391 (1678)
+.+|+||.+.|++++|+.||++|+|++. |++|||||+.+-+ |++. +. -+--+.|.|.|+..-+ +++
T Consensus 79 ~~~LKgH~~~vt~~~FsSdGK~lat~~~----Dr~Ir~w~~~DF~~~eHr~~R~nve--~dhpT~V~FapDc~s~vv~~~ 152 (420)
T KOG2096|consen 79 VSVLKGHKKEVTDVAFSSDGKKLATISG----DRSIRLWDVRDFENKEHRCIRQNVE--YDHPTRVVFAPDCKSVVVSVK 152 (420)
T ss_pred hhhhhccCCceeeeEEcCCCceeEEEeC----CceEEEEecchhhhhhhhHhhcccc--CCCceEEEECCCcceEEEEEc
Confidence 5679999999999999999999999997 9999999997632 2221 11 1234678898887765 444
Q ss_pred -CCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEE
Q 000316 1392 -DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVV 1470 (1678)
Q Consensus 1392 -DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Las 1470 (1678)
..++++|.....+- ..+..+. +.+.. .. -...|+-.+. .+.+..++.++++
T Consensus 153 ~g~~l~vyk~~K~~d-G~~~~~~-------------v~~D~--~~--f~~kh~v~~i----------~iGiA~~~k~ims 204 (420)
T KOG2096|consen 153 RGNKLCVYKLVKKTD-GSGSHHF-------------VHIDN--LE--FERKHQVDII----------NIGIAGNAKYIMS 204 (420)
T ss_pred cCCEEEEEEeeeccc-CCCCccc-------------ccccc--cc--cchhcccceE----------EEeecCCceEEEE
Confidence 56788876542211 0000000 00000 00 0001122222 2333445789999
Q ss_pred EECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCC---CC---
Q 000316 1471 GIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVR---SG--- 1544 (1678)
Q Consensus 1471 gs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~---tg--- 1544 (1678)
++.|.+|.+||++ |+.+..+...... -... ..+|+|.++|+++---.|++|.+- .|
T Consensus 205 as~dt~i~lw~lk-Gq~L~~idtnq~~------n~~a-----------avSP~GRFia~~gFTpDVkVwE~~f~kdG~fq 266 (420)
T KOG2096|consen 205 ASLDTKICLWDLK-GQLLQSIDTNQSS------NYDA-----------AVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQ 266 (420)
T ss_pred ecCCCcEEEEecC-Cceeeeecccccc------ccce-----------eeCCCCcEEEEecCCCCceEEEEEeccCcchh
Confidence 9999999999998 8888776533211 0111 224777899999998999999873 33
Q ss_pred --cEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCC--CCCCeEeec--------CCCCEE-EEEecCCEE
Q 000316 1545 --NVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNW--PSQPTVFKG--------HTNGIS-GFSVWGQDV 1610 (1678)
Q Consensus 1545 --~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~--~~~~~~l~g--------H~~~V~-afSpdg~~L 1610 (1678)
+.+..++||+..|..++ +++...++|.|.||+++|||..-.. .+-...++. -..++. ++||.|+.|
T Consensus 267 ev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~l 346 (420)
T KOG2096|consen 267 EVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSL 346 (420)
T ss_pred hhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEE
Confidence 24567889999999999 8999999999999999999975321 011112221 123455 699999999
Q ss_pred EEEeCCCeEEEecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1611 ISISNNKIGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1611 aSgs~D~I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
|.+....+.++...+ |....... .-|.+.|++++|+++|+.++||| |..++++
T Consensus 347 A~s~gs~l~~~~se~-----g~~~~~~e--------~~h~~~Is~is~~~~g~~~atcG-dr~vrv~ 399 (420)
T KOG2096|consen 347 AVSFGSDLKVFASED-----GKDYPELE--------DIHSTTISSISYSSDGKYIATCG-DRYVRVI 399 (420)
T ss_pred EeecCCceEEEEccc-----CccchhHH--------HhhcCceeeEEecCCCcEEeeec-ceeeeee
Confidence 998877799998542 22111111 13888999999999999999998 6667663
No 497
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.86 E-value=1.9e-21 Score=227.46 Aligned_cols=198 Identities=15% Similarity=0.185 Sum_probs=156.9
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCc--------ChHHHHHHHHhcCCCchhHHHhhcc-CC
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKA--------SGQESKNFLRLIGVPSFDESSVPGC-LR 233 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~--------~~~~~~~~l~~~~~~~~~Ei~iL~~-l~ 233 (1678)
.|++.+.||+|+||.||+|.+.. ..+..+|+|.+..... ......++. +|+.++.+ ++
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~-----~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~ 67 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKN-----NGQNLLALKEINVHNPAFGKDKRERDKSIGDIV--------SEVTIIKEQLR 67 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcC-----CCCceeeeeEeeccccccccccccchHHHHHHH--------HHHHHHhhcCC
Confidence 48889999999999999999642 2467899998864321 111222233 88888865 79
Q ss_pred CCcccceeeEEEeCCeEEEeccCCCC-CHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCCeEe
Q 000316 234 HPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLL 309 (1678)
Q Consensus 234 HpNIV~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl 309 (1678)
||||+++++++..++..++||||++| +|.+++.. .....+++..++.++.|++.||.|||+ +||+||||||+||++
T Consensus 68 h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~ 147 (269)
T cd08528 68 HPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIML 147 (269)
T ss_pred CCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEE
Confidence 99999999999999999999999995 99988853 234568999999999999999999996 789999999999999
Q ss_pred cCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhcc
Q 000316 310 TDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNK 389 (1678)
Q Consensus 310 ~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~ 389 (1678)
+.++ .+||+|||++....... ......++..|+|||.+.+..++..+|+|+.|.+ .+..
T Consensus 148 ~~~~--~~~l~dfg~~~~~~~~~------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~l-------l~~l 206 (269)
T cd08528 148 GEDD--KVTITDFGLAKQKQPES------------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCI-------LYQM 206 (269)
T ss_pred CCCC--cEEEecccceeeccccc------------ccccccCcccCcChhhhcCCCCchHHHHHHHHHH-------HHHH
Confidence 9999 89999999998543211 0112346788999999998889999999999944 4444
Q ss_pred ccCCC
Q 000316 390 LAGRR 394 (1678)
Q Consensus 390 ~aGRs 394 (1678)
+.|+.
T Consensus 207 ~~g~~ 211 (269)
T cd08528 207 CTLQP 211 (269)
T ss_pred HhCCC
Confidence 55654
No 498
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.86 E-value=9.8e-22 Score=226.10 Aligned_cols=168 Identities=14% Similarity=0.058 Sum_probs=139.2
Q ss_pred eCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeCCeEEE
Q 000316 173 CSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITS 252 (1678)
Q Consensus 173 G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~~~~~l 252 (1678)
|.||.||+|+++ .+++.+|+|.+...... . +|...+....||||+++++++.+.+..++
T Consensus 4 g~~~~v~~~~~~------~~~~~~~~K~i~~~~~~-------~--------~~~~~~~~~~~~~i~~~~~~~~~~~~~~l 62 (237)
T cd05576 4 GVIDKVLLVMDT------RTQQTFILKGLRKSSEY-------S--------RERLTIIPHCVPNMVCLHKYIVSEDSVFL 62 (237)
T ss_pred cccceEEEEEEc------cCCcEEEEEeecchhhh-------h--------hHHHHHHhcCCCceeehhhheecCCeEEE
Confidence 899999999975 57889999998764211 1 45555555679999999999999999999
Q ss_pred eccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCcccCCCC
Q 000316 253 VIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIA 331 (1678)
Q Consensus 253 VmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~~~~~ 331 (1678)
||||++| +|.+++.. ...+++..+..++.|++.||+|||++||+||||||+||+++.++ .+||+|||.+......
T Consensus 63 v~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~--~~~l~df~~~~~~~~~ 138 (237)
T cd05576 63 VLQHAEGGKLWSHISK--FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRG--HIQLTYFSRWSEVEDS 138 (237)
T ss_pred EEecCCCCCHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCC--CEEEecccchhccccc
Confidence 9999995 99999873 44589999999999999999999999999999999999999999 8999999988643311
Q ss_pred CcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 332 DWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
. ....++..|+|||......++..+|+|+.|.+.
T Consensus 139 ~--------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il 172 (237)
T cd05576 139 C--------------DGEAVENMYCAPEVGGISEETEACDWWSLGAIL 172 (237)
T ss_pred c--------------ccCCcCccccCCcccCCCCCCchhhHHHHHHHH
Confidence 0 011245679999999888899999999999554
No 499
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.86 E-value=6.9e-23 Score=245.94 Aligned_cols=190 Identities=16% Similarity=0.182 Sum_probs=161.2
Q ss_pred cccccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCC
Q 000316 156 SCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHP 235 (1678)
Q Consensus 156 ~~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~Hp 235 (1678)
...+-.++|+++..+|.|+||.||+|+++ ..+...|+|+++...... ...++ .|+-+++.++||
T Consensus 9 srrnP~ddyellqrvgsgTygdvyKaRd~------~s~elaavkvVkLep~dd---~~~iq-------qei~~~~dc~h~ 72 (829)
T KOG0576|consen 9 SRRNPQDDYELLQRVGSGTYGDVYKARDK------RSGELAAVKVVKLEPGDD---FSGIQ-------QEIGMLRDCRHP 72 (829)
T ss_pred hhcCCccchhheeeecCCcccchhhhccc------ccCchhhheeeeccCCcc---ccccc-------cceeeeecCCCc
Confidence 33355789999999999999999999976 578899999998643222 11222 899999999999
Q ss_pred cccceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 236 NVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 236 NIV~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
|||.+++.+...+.++++||||+| +|.++.. -.+++++.++.++.++.++||+|||++|-+|||||-.|||+++.|
T Consensus 73 nivay~gsylr~dklwicMEycgggslQdiy~--~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~g- 149 (829)
T KOG0576|consen 73 NIVAYFGSYLRRDKLWICMEYCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEG- 149 (829)
T ss_pred ChHHHHhhhhhhcCcEEEEEecCCCcccceee--ecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccC-
Confidence 999999999999999999999995 9999877 678899999999999999999999999999999999999999999
Q ss_pred eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccc---ccccccccccccccC
Q 000316 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS---QSMDWHSQFNRWWRG 376 (1678)
Q Consensus 315 ~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~---~~~~y~~~~d~W~~G 376 (1678)
.+|++|||.+......- . ..-...||++|||||+. +...|+..+|+|..|
T Consensus 150 -DvklaDfgvsaqitati-----~------KrksfiGtpywmapEvaaverkggynqlcdiwa~g 202 (829)
T KOG0576|consen 150 -DVKLADFGVSAQITATI-----A------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALG 202 (829)
T ss_pred -ceeecccCchhhhhhhh-----h------hhhcccCCccccchhHHHHHhcccccccccccccc
Confidence 89999999987543110 0 11234599999999965 477899999999999
No 500
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.86 E-value=2.9e-19 Score=188.71 Aligned_cols=294 Identities=18% Similarity=0.196 Sum_probs=221.2
Q ss_pred eeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCC------CCe--------E-EEEEecCCccEEEEeecC
Q 000316 1319 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELT------RIN--------C-VSGYYGHEEVVNDICVLS 1383 (1678)
Q Consensus 1319 ~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~------tg~--------~-l~~l~gH~~~V~sV~fs~ 1383 (1678)
++.++. -+.+|++|+|+|.|...+.||. .++.||--.. .+- . -+.-+-|.+.|+|++|+|
T Consensus 25 ~i~~l~-dsqairav~fhp~g~lyavgsn----skt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~ 99 (350)
T KOG0641|consen 25 AINILE-DSQAIRAVAFHPAGGLYAVGSN----SKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSP 99 (350)
T ss_pred EEEEec-chhheeeEEecCCCceEEeccC----CceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecC
Confidence 455555 5678999999999999999997 7898887431 110 0 112246899999999999
Q ss_pred CCCcEE--eCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEe
Q 000316 1384 SSGRIA--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHH 1461 (1678)
Q Consensus 1384 ~~~~la--S~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~ 1461 (1678)
++..++ |.|++|++--.+...+- ..+|. +..+.|.+.|..++|-...
T Consensus 100 ~geliatgsndk~ik~l~fn~dt~~--~~g~d-----------------------le~nmhdgtirdl~fld~~------ 148 (350)
T KOG0641|consen 100 CGELIATGSNDKTIKVLPFNADTCN--ATGHD-----------------------LEFNMHDGTIRDLAFLDDP------ 148 (350)
T ss_pred ccCeEEecCCCceEEEEeccccccc--ccCcc-----------------------eeeeecCCceeeeEEecCC------
Confidence 999984 55999999876644331 12211 3345567778888874331
Q ss_pred ecCCCEEEEE-ECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEe
Q 000316 1462 IECVERLVVG-IGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFD 1540 (1678)
Q Consensus 1462 sp~g~~Lasg-s~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD 1540 (1678)
...+..++++ ..|..|.+-|..+|+..+.+.+|++- |.++-. .+|-++++|+.|.+|++||
T Consensus 149 ~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtgh------ilalys------------wn~~m~~sgsqdktirfwd 210 (350)
T KOG0641|consen 149 ESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGH------ILALYS------------WNGAMFASGSQDKTIRFWD 210 (350)
T ss_pred CcCceEEEecCCCcceEEEeecCCCCcceeecCCccc------EEEEEE------------ecCcEEEccCCCceEEEEe
Confidence 1124455554 45778888899999999999887653 333321 3456899999999999999
Q ss_pred CCCCcEEEEEec--c-----CCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEE--EEecCCEE
Q 000316 1541 VRSGNVIASWRA--H-----DGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDV 1610 (1678)
Q Consensus 1541 ~~tg~~i~~l~g--H-----~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~L 1610 (1678)
+|-..++.++.. | +..|.+|+ .|.|++|+||-.|.+..+||++.+ +.++.+..|+..|.+ |||...++
T Consensus 211 lrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~--r~iq~f~phsadir~vrfsp~a~yl 288 (350)
T KOG0641|consen 211 LRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGG--RMIQRFHPHSADIRCVRFSPGAHYL 288 (350)
T ss_pred eeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCC--ceeeeeCCCccceeEEEeCCCceEE
Confidence 999888887742 3 25688888 999999999999999999999998 667789999999997 99999999
Q ss_pred EEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1611 ISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1611 aSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
.+||.|. |++-|+.. +...+... ...+ .|...+-.+.|+|..--|++.|.|.++.+|.
T Consensus 289 lt~syd~~ikltdlqg--dla~el~~-------~vv~-ehkdk~i~~rwh~~d~sfisssadkt~tlwa 347 (350)
T KOG0641|consen 289 LTCSYDMKIKLTDLQG--DLAHELPI-------MVVA-EHKDKAIQCRWHPQDFSFISSSADKTATLWA 347 (350)
T ss_pred EEecccceEEEeeccc--chhhcCce-------EEEE-eccCceEEEEecCccceeeeccCcceEEEec
Confidence 9999998 99999862 22222211 1111 4888888999999999999999999999994
Done!