Query 000316
Match_columns 1678
No_of_seqs 1123 out of 7948
Neff 7.2
Searched_HMMs 29240
Date Tue Mar 26 17:56:14 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000316.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_93-97//hhsearch_pdb/000316hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1t77_A Lipopolysaccharide-resp 1.0 1 1 577.2 6.9 236 367-602 134-414 (414)
2 4b9d_A Serine/threonine-protei 1.0 1 1 402.6 21.5 177 158-361 20-197 (350)
3 4b99_A Mitogen-activated prote 1.0 1 1 396.7 25.8 178 160-362 52-235 (398)
4 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 392.8 22.0 176 161-362 31-207 (311)
5 4fie_A Serine/threonine-protei 1.0 1 1 392.8 25.8 169 161-361 150-319 (423)
6 4fih_A Serine/threonine-protei 1.0 1 1 391.8 24.4 169 161-361 73-242 (346)
7 3hyh_A Carbon catabolite-derep 1.0 1 1 385.2 20.4 172 161-361 12-183 (275)
8 3v5w_A G-protein coupled recep 1.0 1 1 384.4 21.7 178 158-362 185-363 (689)
9 3ubd_A Ribosomal protein S6 ki 1.0 1 1 382.2 18.4 175 161-361 23-198 (304)
10 4g3f_A NF-kappa-beta-inducing 1.0 1 1 380.2 24.9 171 161-361 57-228 (336)
No 1
>1t77_A Lipopolysaccharide-responsive and beige-like anchor protein, CDC4-like protein; PH-beach domains, vesicle trafficking, signal transduction; 2.40A {Homo sapiens} SCOP: a.169.1.1 b.55.1.6 PDB: 1mi1_A
Probab=1.00 E-value=1 Score=577.24 Aligned_cols=236 Identities=34% Similarity=0.565 Sum_probs=209.6
Q ss_pred CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEE-CCCCC-CCCCCCCCCCCCCCCHHHHCCCCC-CHHCCC
Q ss_conf 222222334765204667652025699999986784234673-07999-999899868568711431124521-000002
Q 000316 367 HSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTK-PDENFDSGSRDLSKSKWRLAKGDE-QLDFTY 443 (1678)
Q Consensus 367 ~~~~d~W~~G~isnfeyl~~ln~~agrs~~dl~~ypv~pwv~-d~~~~-~~~~~~~~~rdLsk~~~~~~~~~~-~~~~~~ 443 (1678)
...+++|..|+||||||||.||.+|||+|+|++||||||||+ ||.++ .|+++|..||||+||||++++++. +++.+|
T Consensus 134 ~~~t~~W~~g~iSNFeYLm~LN~~aGRs~nDl~qYPVFPWVl~dy~s~~ldl~~~~~~RDLskpigaln~~r~~~~~~ry 213 (414)
T 1t77_A 134 SNMTQRWQHREISNFEYLMFLNTIAGRSYNDLNQYPVFPWVITNYESEELDLTLPTNFRDLSKPIGALNPKRAAFFAERY 213 (414)
T ss_dssp CSHHHHHHTTSSCHHHHHHHHHHHHTCCSSCGGGCCCBCCCBCCCSSSSCCTTCGGGBCCTTSCHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHH
T ss_conf 06778875387548999999998738876654558623605436766444667864404588753332987999999999
Q ss_pred CC----CCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCC--CCCCCCCCHHHHHHC------CCCCCCCCCCCCCC
Q ss_conf 78----9989655855667532354101348646899874125--699995106877313------98863245665588
Q 000316 444 SS----SEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSV--YEPNEYPSTMQRLYQ------WTPDECIPEFYCDP 511 (1678)
Q Consensus 444 ~~----~~~~~h~~~~~~~~~~v~~y~~r~~p~~~l~~~~~~~--~~~~~~~~~~~~~~~------~~~~EliPef~~~p 511 (1678)
.. ...|+||+++|+++++|++||+|++|||.+++.++++ +.|++.+.++.+.+. .|++|||||||++|
T Consensus 214 ~~~~~~~~~~f~ygshyS~~~~V~~yL~R~ePft~~~~~lq~g~fD~~dR~F~Si~~~w~~~~~~~~d~kElIPEFf~~P 293 (414)
T 1t77_A 214 ESWEDDQVPKFHYGTHYSTASFVLAWLLRIEPFTTYFLNLQGGKFDHADRTFSSISRAWRNSQRDTSDIKELIPEFYYLP 293 (414)
T ss_dssp HHCCCSSSCCCSBSSCSCCHHHHHHHHTTSTTHHHHHHHHHTSSCCCTTTSCCBHHHHHHHHHHCTTCCCCBCGGGGTCG
T ss_pred HHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCH
T ss_conf 75013689976558877788999998705785789999874697678761155699999987346898454492320583
Q ss_pred CCCCCCC----------CCCCCEECCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCC
Q ss_conf 4453499----------999972049999998899999998424468875488840010234878344671499899899
Q 000316 512 QIFYSQH----------PGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSS 581 (1678)
Q Consensus 512 ~~f~~~~----------~~~~dv~lP~Wa~~~~~Fi~~~r~aLEs~~Vs~~l~~WIDlifG~k~~g~~a~~~~nv~~~~~ 581 (1678)
|||+|.| ..|+||+|||||+||++||++||+||||+|||+|||+||||||||||+|++|++|+|||||++
T Consensus 294 e~l~N~n~~~lG~~~~g~~v~DV~LP~Wa~sp~~FI~~~R~aLES~~VS~~Lh~WIDLiFGykq~G~~Av~a~Nvf~~lt 373 (414)
T 1t77_A 294 EMFVNFNNYNLGVMDDGTVVSDVELPPWAKTSEEFVHINRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRALNVFYYLT 373 (414)
T ss_dssp GGGSCTTCCCCCBCTTSCBCSSCBCCTTCSSHHHHHHHHHHHHHSHHHHTTHHHHHHHHTSTTSSHHHHHHHTCCBCGGG
T ss_pred HHHCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCE
T ss_conf 76435567765646689877753679998998999999999971828664143443554074568988995579612200
Q ss_pred CCC------------------CCCCCC--CCCCCCCCCCCC
Q ss_conf 998------------------654667--674467888899
Q 000316 582 EPT------------------KPKSVG--RLQLFTQPHPVR 602 (1678)
Q Consensus 582 ~~~------------------~~~~~g--~~qlf~~pHp~r 602 (1678)
+.. +...+| |.|||++|||+|
T Consensus 374 Y~~~vd~~~i~d~~~~~a~~~~i~~fGQ~P~QLF~~pHP~R 414 (414)
T 1t77_A 374 YEGAVNLNSITDPVLREAVEAQIRSFGQTPSQLLIEPHPPR 414 (414)
T ss_dssp STTSCCGGGCCSHHHHHHHHHHHHHHCCCCCCCCSSCCCCC
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCC
T ss_conf 06743423369878999999999976998346516899899
No 2
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=402.58 Aligned_cols=177 Identities=18% Similarity=0.150 Sum_probs=152.2
Q ss_pred CCCCCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCC
Q ss_conf 43378966763354327279999996377774556209999982157767277899998508993558885102898761
Q 000316 158 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 237 (1678)
Q Consensus 158 ~~~~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNI 237 (1678)
...+++|+++++||+|+||+||+|+++ .+++.||+|++.+..........+. +|+.+|+.|+||||
T Consensus 20 f~sme~Y~~~~~lG~G~fg~V~~a~~~------~~~~~vAiK~i~~~~~~~~~~~~~~--------~E~~il~~l~HpnI 85 (350)
T 4b9d_A 20 FQSMEKYVRLQKIGEGSFGKAILVKST------EDGRQYVIKEINISRMSSKEREESR--------REVAVLANMKHPNI 85 (350)
T ss_dssp CSCCCCEEEEEEC------CEEEEEET------TTCCEEEEEEEECTTSCHHHHHHHH--------HHHHHHHHCCCTTB
T ss_pred CCCCCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEEEHHHCCHHHHHHHH--------HHHHHHHHCCCCCC
T ss_conf 785125588479702779399999988------9998999999865878979999999--------99999987799898
Q ss_pred CCEEEEEEECCEEEEECCCCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEE
Q ss_conf 333169993896778513899-9988898619999887999999999999999998948922068998973755799415
Q 000316 238 APVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1678)
Q Consensus 238 V~l~~~~~~~~~l~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~ 316 (1678)
|+++++|++++.+|||||||+ |+|.+++...+...+++..++.|+.||+.||.|||+++|+||||||+|||++.+| .
T Consensus 86 V~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g--~ 163 (350)
T 4b9d_A 86 VQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG--T 163 (350)
T ss_dssp CCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTC--C
T ss_pred CCEEEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECCCC--C
T ss_conf 91999999899999999488998399999973899997899999999999999999989915135978997987899--9
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 999726885447888864466888842000244567642100012
Q 000316 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 317 iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil 361 (1678)
+||+|||+|+....... ....+.||+.|||||++
T Consensus 164 vKl~DFGla~~~~~~~~-----------~~~~~~GT~~YmAPE~l 197 (350)
T 4b9d_A 164 VQLGDFGIARVLNSTVE-----------LARACIGTPYYLSPEIC 197 (350)
T ss_dssp EEECSTTEESCCCHHHH-----------HHHHHHSCCTTCCHHHH
T ss_pred EEECCCCCCEEECCCCC-----------CCCCCCCCCCCCCHHHH
T ss_conf 89764652144068854-----------10145788360399998
No 3
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=1.00 E-value=1 Score=396.72 Aligned_cols=178 Identities=20% Similarity=0.255 Sum_probs=147.4
Q ss_pred CCCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 37896676335432727999999637777455620999998215776727789999850899355888510289876133
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++++.||+|+||+||+|+++ .++..||||++++..........++ +|+.+|+.++|||||+
T Consensus 52 i~~~Y~~~~~lG~G~fG~V~~a~~~------~t~~~vAiK~i~~~~~~~~~~~~~~--------~Ei~il~~l~HpnIv~ 117 (398)
T 4b99_A 52 VGDEYEIIETIGNGAYGVVSSARRR------LTGQQVAIKKIPNAFDVVTNAKRTL--------RELKILKHFKHDNIIA 117 (398)
T ss_dssp CCSSEEEEEEEEECSSCEEEEEEET------TTCCEEEEEEETTTTSSHHHHHHHH--------HHHHHHHHCCCTTBCC
T ss_pred CCCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECCCCCCHHHHHHHH--------HHHHHHHHCCCCCCCE
T ss_conf 7897489889842608499999998------9998999999874003468899999--------9999998667999541
Q ss_pred EEEEEEEC------CEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCC
Q ss_conf 31699938------967785138999988898619999887999999999999999998948922068998973755799
Q 000316 240 VLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 240 l~~~~~~~------~~l~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g 313 (1678)
+++++... +.+|||||||+|+|.+++. ..+.+++..++.|++||+.||.|||++|||||||||+|||++.+|
T Consensus 118 l~~~~~~~~~~~~~~~~~ivmE~~~g~L~~~i~--~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~ 195 (398)
T 4b99_A 118 IKDILRPTVPYGEFKSVYVVLDLMESDLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENC 195 (398)
T ss_dssp EEEECCCSSCTTTCCCEEEEEECCSEEHHHHHT--SSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTC
T ss_pred EEEEEECCCCCCCCCEEEEEEECCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 765552035546688799998379998899998--659999999999999999999999988676787371335427888
Q ss_pred CEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 4159997268854478888644668888420002445676421000122
Q 000316 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 314 ~~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil~ 362 (1678)
.+||+|||+|+......... ........||+.|||||++.
T Consensus 196 --~~Ki~DFGla~~~~~~~~~~-------~~~~~~~~GT~~Y~APEv~~ 235 (398)
T 4b99_A 196 --ELKIGDFGMARGLCTSPAEH-------QYFMTEYVATRWYRAPELML 235 (398)
T ss_dssp --CEEECCCTTCBCC--------------CCCCCSSCCCCTTCCHHHHT
T ss_pred --CEEEEECCEEEECCCCCCCC-------CCCCCCCEECHHHCCHHHHC
T ss_conf --77872214342134675456-------66656625586764878762
No 4
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=392.83 Aligned_cols=176 Identities=18% Similarity=0.163 Sum_probs=147.4
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||+|+||+||+|+++ .++..||+|.+.+.........+.+. +|+++|+.++|||||++
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~------~~~~~~AiK~i~k~~~~~~~~~~~~~-------~E~~il~~l~HpnIv~l 97 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLAREL------ATSREYAIKILEKRHIIKENKVPYVT-------RERDVMSRLDHPFFVKL 97 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET------TTCCEEEEEEEEHHHHHHTTCHHHHH-------HHHHHHTTCCCTTBCCE
T ss_pred CCCCEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEEEHHHCCCHHHHHHHH-------HHHHHHHHCCCCCCCEE
T ss_conf 523689889831648499999999------99989999998888877978999999-------99999986799898919
Q ss_pred EEEEEECCEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 1699938967785138999-988898619999887999999999999999998948922068998973755799415999
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iKI 319 (1678)
+++|++++.+|+|||||+| +|.++++ +.+.+++..+++|+.||+.||.|||+++|+||||||+|||++.+| ++||
T Consensus 98 ~~~~~~~~~~yivmEy~~gG~L~~~i~--~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g--~vKl 173 (311)
T 4aw0_A 98 YFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM--HIQI 173 (311)
T ss_dssp EEEEECSSEEEEEECCCTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS--CEEE
T ss_pred EEEEEECCEEEEEEECCCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCC--CEEE
T ss_conf 999973898999996489989999998--749999999999999999999999988782687878996985898--8899
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 7268854478888644668888420002445676421000122
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 320 ~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil~ 362 (1678)
+|||+|+......... . .....||+.|||||++.
T Consensus 174 ~DFGla~~~~~~~~~~---~------~~~~~GTp~YmAPEvl~ 207 (311)
T 4aw0_A 174 TDFGTAKVLSPESKQA---R------ANSFVGTAQYVSPELLT 207 (311)
T ss_dssp CCCTTCEECCTTTTCC---C------BCCCCSCGGGCCHHHHH
T ss_pred EECCCCEECCCCCCCC---C------CCCCCCCCCCCCHHHHC
T ss_conf 8768750257787765---4------36755680307998976
No 5
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=392.82 Aligned_cols=169 Identities=17% Similarity=0.118 Sum_probs=143.8
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
.+.|+++++||+|+||.||+|+++ .++..||||++........ ..+. +|+.+|+.++|||||++
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~------~tg~~vAiK~i~~~~~~~~--~~~~--------~Ei~il~~l~HpnIV~l 213 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVR------SSGKLVAVKKMDLRKQQRR--ELLF--------NEVVIMRDYQHENVVEM 213 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEET------TTCCEEEEEEEESTTCSSG--GGHH--------HHHHHHHHCCCTTBCCE
T ss_pred HHHCEEEEEECCCCCCEEEEEEEC------CCCCEEEEEEEECCCHHHH--HHHH--------HHHHHHHHCCCCCCCCE
T ss_conf 684386169624818489999999------9998999999862554689--9999--------99999985799898716
Q ss_pred EEEEEECCEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 1699938967785138999-988898619999887999999999999999998948922068998973755799415999
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iKI 319 (1678)
+++|.+.+.+|||||||+| +|.++++. +.+++..++.|+.||+.||.|||+++||||||||+|||++.+| .+||
T Consensus 214 ~~~~~~~~~~~iVmEy~~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g--~vKl 288 (423)
T 4fie_A 214 YNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG--RVKL 288 (423)
T ss_dssp EEEEEETTEEEEEEECCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTC--CEEE
T ss_pred EEEEEECCEEEEEEECCCCCCHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCC--CEEE
T ss_conf 8999989999999969899828988761---6989999999999999999999988904465787778985899--9898
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 726885447888864466888842000244567642100012
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 320 ~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil 361 (1678)
+|||+|+....... . .....||+.|||||++
T Consensus 289 ~DFGla~~~~~~~~-----~------~~~~~GTp~YmAPEvl 319 (423)
T 4fie_A 289 SDFGFCAQVSKEVP-----R------RKSLVGTPYWMAPELI 319 (423)
T ss_dssp CCCTTCEECCSSCC-----C------BCCCEECTTTCCHHHH
T ss_pred ECCCCCEECCCCCC-----C------CCCCCCCCCCCCHHHH
T ss_conf 03726547778876-----4------3466647472799997
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=391.84 Aligned_cols=169 Identities=17% Similarity=0.114 Sum_probs=143.6
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
...|+.+++||+|+||+||+|+++ .++..||||++...+.... ..+. +|+.+|+.++|||||++
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~------~tg~~vAiK~i~~~~~~~~--~~~~--------~Ei~il~~l~HpnIV~l 136 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVR------SSGKLVAVKKMDLRKQQRR--ELLF--------NEVVIMRDYQHENVVEM 136 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEET------TTCCEEEEEEEEGGGCSSG--GGGH--------HHHHHHHHCCCTTBCCE
T ss_pred HHHCEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEEECCCHHHH--HHHH--------HHHHHHHHCCCCCCCCE
T ss_conf 575387079602728299999998------9998999999852765689--9999--------99999986799899919
Q ss_pred EEEEEECCEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 1699938967785138999-988898619999887999999999999999998948922068998973755799415999
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iKI 319 (1678)
+++|.+++.+|||||||+| +|.+++.. +.+++..++.|+.||+.||.|||+++||||||||+|||++.+| ++||
T Consensus 137 ~~~~~~~~~~~ivmEy~~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g--~vKl 211 (346)
T 4fih_A 137 YNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG--RVKL 211 (346)
T ss_dssp EEEEEETTEEEEEECCCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC--CEEE
T ss_pred EEEEEECCEEEEEEECCCCCCHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCC--CEEE
T ss_conf 9999989999999969899808999871---8989999999999999999999988835562788997887999--8899
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 726885447888864466888842000244567642100012
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 320 ~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil 361 (1678)
+|||+|+........ .....||+.|||||++
T Consensus 212 ~DFGla~~~~~~~~~-----------~~~~~GTp~YmAPEvl 242 (346)
T 4fih_A 212 SDFGFCAQVSKEVPR-----------RKSLVGTPYWMAPELI 242 (346)
T ss_dssp CCCTTCEECCSSSCC-----------BCCCCSCGGGCCHHHH
T ss_pred ECCCCCEECCCCCCC-----------CCCCCCCCCCCCHHHH
T ss_conf 027575366788775-----------3465627582799997
No 7
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=1.00 E-value=1 Score=385.20 Aligned_cols=172 Identities=20% Similarity=0.214 Sum_probs=146.7
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
+++|++++.||+|+||+||+|+++ .++..||+|.+.+.........+.+. +|+.+|+.++|||||++
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~------~~~~~vAiK~i~~~~~~~~~~~~~~~-------~Ei~il~~l~HpnIv~~ 78 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHT------TTGQKVALKIINKKVLAKSDMQGRIE-------REISYLRLLRHPHIIKL 78 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECT------TTCCEEEEEEEECC------CHHHHH-------HHHHHHHHCCCTTBCCE
T ss_pred EECEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEEEHHHCCCHHHHHHHH-------HHHHHHHHCCCCCCCEE
T ss_conf 338689999821768199999999------99989999998378867878999999-------99999987799899929
Q ss_pred EEEEEECCEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEEE
Q ss_conf 16999389677851389999888986199998879999999999999999989489220689989737557994159997
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iKI~ 320 (1678)
++++.+++.+|+|||||+|+|.+++. ..+.+++..++.++.||+.||.|||+++|+||||||+|||++.++ .+||+
T Consensus 79 ~~~~~~~~~~~ivmEy~~g~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~--~vkl~ 154 (275)
T 3hyh_A 79 YDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHL--NVKIA 154 (275)
T ss_dssp EEEEECSSEEEEEEECCCEEHHHHHH--HSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTC--CEEEC
T ss_pred EEEEEECCEEEEEEECCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCC--CEEEE
T ss_conf 99999899899999278997899998--749999999999999999999999988930666875876887999--89994
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 26885447888864466888842000244567642100012
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 321 DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil 361 (1678)
|||+|+...... .. ....||+.|||||++
T Consensus 155 DFGla~~~~~~~------~~------~~~~GT~~Y~APE~~ 183 (275)
T 3hyh_A 155 DFGLSNIMTDGN------FL------KTSCGSPNYAAPEVI 183 (275)
T ss_dssp CSSCC---------------------------CTTSCHHHH
T ss_pred ECCCCEECCCCC------CC------CCEEECCCCCCHHHH
T ss_conf 547772667887------46------770289352774550
No 8
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=1.00 E-value=1 Score=384.42 Aligned_cols=178 Identities=15% Similarity=0.090 Sum_probs=145.6
Q ss_pred CCCCCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCC
Q ss_conf 43378966763354327279999996377774556209999982157767277899998508993558885102898761
Q 000316 158 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 237 (1678)
Q Consensus 158 ~~~~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNI 237 (1678)
...+++|++++.||+|+||+||+|+++ .++..||+|++.+............... .+++.+++.++||||
T Consensus 185 ~~slddf~i~k~LG~G~fG~V~la~~~------~tg~~~AiK~i~K~~i~~~~~~~~~~~E----~~~l~ll~~~~HP~I 254 (689)
T 3v5w_A 185 HLTMNDFSVHRIIGRGGFGEVYGCRKA------DTGKMYAMKCLDKKRIKMKQGETLALNE----RIMLSLVSTGDCPFI 254 (689)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEET------TTCCEEEEEEEEHHHHHHTTCHHHHHHH----HHHHHHHSSSCCTTB
T ss_pred CCCHHHEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEEEHHHCCHHHHHHHHHHH----HHHHHHHHHCCCCCE
T ss_conf 995689288889831648399999999------9998999999757882525568999999----999999964899987
Q ss_pred CCEEEEEEECCEEEEECCCCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEE
Q ss_conf 333169993896778513899-9988898619999887999999999999999998948922068998973755799415
Q 000316 238 APVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1678)
Q Consensus 238 V~l~~~~~~~~~l~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~ 316 (1678)
|+++++|++.+.+|+|||||+ |+|.++|. +.+.+++..+++|+.||+.||.|||++|||||||||+|||++.+| +
T Consensus 255 V~l~~~f~~~~~lylVmEy~~GGdL~~~l~--~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G--~ 330 (689)
T 3v5w_A 255 VCMSYAFHTPDKLSFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--H 330 (689)
T ss_dssp CCEEEEEECSSEEEEEECCCCSCBHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTS--C
T ss_pred EEEEEEEEECCEEEEEEECCCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCC--C
T ss_conf 179999998998899994689982999998--669999999999999999999999978854168866875980899--8
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 9997268854478888644668888420002445676421000122
Q 000316 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 317 iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil~ 362 (1678)
+||+|||+|+..... ...+ ..||+.|||||++.
T Consensus 331 vKL~DFGlA~~~~~~-------~~~t------~~GTp~YmAPEvl~ 363 (689)
T 3v5w_A 331 VRISDLGLACDFSKK-------KPHA------SVGTHGYMAPEVLQ 363 (689)
T ss_dssp EEECCCTTCEECSSC-------CCCS------CCSCGGGCCHHHHS
T ss_pred EEECCCCEEEECCCC-------CCCC------CCCCCCCCCHHHHH
T ss_conf 896456556663789-------8777------65786731889984
No 9
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=1.00 E-value=1 Score=382.17 Aligned_cols=175 Identities=17% Similarity=0.140 Sum_probs=145.9
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||+|+||+||+|++.. ...+++.||+|.+.+.........++. +|+.+|+.++|||||++
T Consensus 23 p~~Y~i~~~lG~G~fg~Vy~a~~~~---~~~~~~~vAiK~i~~~~~~~~~~~~~~--------~E~~il~~l~HpnIv~l 91 (304)
T 3ubd_A 23 PSQFELLKVLGQGSFGKVFLVKKIS---GSDARQLYAMKVLKKATLKVRDRVRTK--------MERDILVEVNHPFIVKL 91 (304)
T ss_dssp GGGEEEEEEEECGGGCEEEEEEECS---STTTTCEEEEEEEESEEEEEEECC--------------CCCCCCCCTTEECE
T ss_pred CCCCEEEEEEECCCCEEEEEEEECC---CCCCCEEEEEEEEEHHHCCHHHHHHHH--------HHHHHHHHCCCCCCCEE
T ss_conf 5565898897218883999999855---887897999999815776847899999--------99999987799799909
Q ss_pred EEEEEECCEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 1699938967785138999-988898619999887999999999999999998948922068998973755799415999
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iKI 319 (1678)
+++|++++.+|+|||||+| +|.++++ +.+.+++..++.++.||+.||.|||+++|+||||||+|||++.+| ++||
T Consensus 92 ~~~~~~~~~~~ivmEy~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g--~vKl 167 (304)
T 3ubd_A 92 HYAFQTEGKLYLILDFLRGGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG--HIKL 167 (304)
T ss_dssp EEEEEETTEEEEEECCCTTCEEHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTS--CEEE
T ss_pred EEEEEECCEEEEEEECCCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCC--CEEE
T ss_conf 999998999999997579988899997--559999999999999999999999977995888878995786899--8876
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 726885447888864466888842000244567642100012
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 320 ~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil 361 (1678)
+|||+|+....... .. ....||+.|||||++
T Consensus 168 ~DFGla~~~~~~~~-----~~------~~~~GT~~YmAPE~~ 198 (304)
T 3ubd_A 168 TDFGLSKESIDHEK-----KA------YSFCGTVEYMAPEVV 198 (304)
T ss_dssp ESSEEEEC-----C-----CC------CSCCCCGGGCCHHHH
T ss_pred CCCCCCEECCCCCC-----CC------CCCCCCCCCCCHHHH
T ss_conf 23663433268876-----30------454418150799996
No 10
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=1.00 E-value=1 Score=380.20 Aligned_cols=171 Identities=13% Similarity=0.114 Sum_probs=142.3
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
.+.|++.++||+|+||+||+|+++ .++..||+|+++..... .+|+.+|+.++|||||++
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~------~~g~~vAiK~i~~~~~~---------------~~E~~il~~l~HpnIV~l 115 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDK------QTGFQCAVKKVRLEVFR---------------VEELVACAGLSSPRIVPL 115 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEET------TTCCEEEEEEEETTTCC---------------THHHHTTTTCCCTTBCCE
T ss_pred HHHEEECCEECCCCCEEEEEEEEC------CCCCEEEEEEECHHHHH---------------HHHHHHHHHCCCCCCCCE
T ss_conf 335176868513878099999988------99989999997888869---------------999999985799899939
Q ss_pred EEEEEECCEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 1699938967785138999-988898619999887999999999999999998948922068998973755799415999
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iKI 319 (1678)
+++|.+++.+|||||||+| +|.++++ ..+.+++..++.|+.||+.||.|||+++||||||||+|||++.+|. ++||
T Consensus 116 ~~~~~~~~~~~ivmEy~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~-~vKl 192 (336)
T 4g3f_A 116 YGAVREGPWVNIFMELLEGGSLGQLIK--QMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGS-RAAL 192 (336)
T ss_dssp EEEEEETTEEEEEECCCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSC-CEEE
T ss_pred EEEEEECCEEEEEEECCCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHEEEECCCC-EEEE
T ss_conf 999998999999996659986999998--7699999999999999999999999889042616778879958999-7999
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 726885447888864466888842000244567642100012
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 320 ~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil 361 (1678)
+|||+|+............. .....||+.|||||++
T Consensus 193 ~DFGla~~~~~~~~~~~~~~------~~~~~GT~~YmAPE~~ 228 (336)
T 4g3f_A 193 CDFGHALCLQPDGLGKSLLT------GDYIPGTETHMAPEVV 228 (336)
T ss_dssp CCCTTCEEC------------------CCCCCCGGGCCHHHH
T ss_pred EECCCCEECCCCCCCCCEEC------CCCCCCCCCCCCHHHH
T ss_conf 62787768567876540221------7854558020089998
Done!