BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000318
(1675 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9NTI5|PDS5B_HUMAN Sister chromatid cohesion protein PDS5 homolog B OS=Homo sapiens
GN=PDS5B PE=1 SV=1
Length = 1447
Score = 273 bits (697), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 267/1085 (24%), Positives = 489/1085 (45%), Gaps = 70/1085 (6%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNA---IVQPVLL 65
+KE+ K+ +K+ +V+ LK +++Q E + +LN + L
Sbjct: 19 VKEISDKI-----SKEEMVRRLKMVVKTFMDMDQDSE----EEKELYLNLALHLASDFFL 69
Query: 66 KHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRV 124
KH DKDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R
Sbjct: 70 KHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYF 129
Query: 125 VILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESE 183
+LE +A +S + +LE +E+ ++Y T F+V ++ H + V M +M ++ E +
Sbjct: 130 YLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGD 189
Query: 184 DIQEDLLVILLSAL---GRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSS-MSGDSRPG 239
+ ++LL +L L +N N A LA ++++ A +E I F M G +
Sbjct: 190 TVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSIS 249
Query: 240 HSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNE 299
++I ++Y +L V+P L +L ++ + RL+ V L+ +F S
Sbjct: 250 DLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSELAS 309
Query: 300 QFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVR 359
Q ++ +L R D V +R+ ++ CL+ P A + L R D +E +R
Sbjct: 310 QNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAK--DLTEYLKVRSHDPEEAIR 367
Query: 360 KQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGS 419
V+ I A + + + V ER DK V++ M LA I++ L++ G
Sbjct: 368 HDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYALQSAAGK 427
Query: 420 INQNEFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRI 478
+ WI K+L Y +E + + P +R++ +++ D
Sbjct: 428 DAAKQIAWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYLYATLDLN 487
Query: 479 EMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAE 537
+KAL ++ + + L+ +++ L L +Q D I K++ V++R+ +P KA+
Sbjct: 488 AVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASVKAIFSKVM----VITRNLPDPGKAQ 543
Query: 538 ENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILG-AKHRLYDFLSTLSM 594
+ Q+ D + K L L+ S QA ++ K LG K FL +
Sbjct: 544 DFMKKFTQVLEDDEKIRKQLEVLVSPTCSCKQAEGCVREITKKLGNPKQPTNPFLEMIKF 603
Query: 595 ---KCSYLLFNKEHVKEILLEVAAQ---------KSSANAQFMQSCMDILGILARFSPLL 642
+ + + + E + ++ +V + Q +++ +++L +L+ P+
Sbjct: 604 LLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTHPIS 663
Query: 643 LGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSR 700
E E L+ LK ++E + E L + G I E S++ +L +G
Sbjct: 664 FHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKSKKGPP 723
Query: 701 RQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFE 758
RQAKYA+H + AI + + +++ L L+ HL L ++G IA A F
Sbjct: 724 RQAKYAIHCIHAIFSSKETQ-FAQIFEPLHKSLDPSNLEHLITPLVTIGHIALLAPDQFA 782
Query: 759 TR-ESEIEEFIKSKILRCSNKIRNDTKACW---DDRSELCLLKIYGIKTLVKSYLPVKDA 814
+S + FI +L T W ++ S ++KI IK +V+ L +K+
Sbjct: 783 APLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMKNN 842
Query: 815 HIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVD 872
H + G L + + S G+++E + S D + LRLA+ A+++L+++ + I ++
Sbjct: 843 HSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIITLE 902
Query: 873 VFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYA--CAFLF-GITESKSPEFEENL 929
+ L Q +++F K+H+ + L +Y CA + + + L
Sbjct: 903 QYQLCALAINDECYQVRQVFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQCL 962
Query: 930 ADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVY 989
I + + + +V S PEY++PY +H AH PD + +D++ + V
Sbjct: 963 VKNINVRREYLKQHAAVSEKLLSL--LPEYVVPYTIHLLAHD--PDYVKVQDIEQLKDVK 1018
Query: 990 CRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIV---DAAKSKNSHAICD 1046
L+F++ +L+ K+E+ S + I + +IK ++D DA ++ + +CD
Sbjct: 1019 ECLWFVLEILMAKNEN--------NSHAFIRKMVENIKQTKDAQGPDDAKMNEKLYTVCD 1070
Query: 1047 LGLSI 1051
+ ++I
Sbjct: 1071 VAMNI 1075
>sp|Q5F3U9|PDS5B_CHICK Sister chromatid cohesion protein PDS5 homolog B OS=Gallus gallus
GN=PDS5B PE=2 SV=3
Length = 1412
Score = 273 bits (697), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 268/1086 (24%), Positives = 490/1086 (45%), Gaps = 72/1086 (6%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNA---IVQPVLL 65
+KE+ K+ +K+ +V+ LK +++Q E + +LN + L
Sbjct: 19 VKEISDKI-----SKEEMVRRLKMVVKTFMDMDQDSE----EEKELYLNLALHLASDFFL 69
Query: 66 KHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRV 124
KH DKDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R
Sbjct: 70 KHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYF 129
Query: 125 VILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESE 183
+LE +A +S + +LE +E+ ++Y T F+V ++ H + V M +M ++ E +
Sbjct: 130 YLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGD 189
Query: 184 DIQEDLLVILLSAL---GRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSS-MSGDSRPG 239
+ ++LL +L L +N N A LA ++++ A +E I F M G +
Sbjct: 190 TVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSIS 249
Query: 240 HSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNE 299
++I ++Y +L V+P L +L ++ + RL+ V L+ +F S
Sbjct: 250 DLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSELAS 309
Query: 300 QFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDENV 358
Q ++ +L R D V +R+ ++ CL+ P A D + L R D +E +
Sbjct: 310 QNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLKV---RSHDPEEAI 366
Query: 359 RKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNG 418
R V+ I A L + + V ER DK V++ M LA I++ L++ G
Sbjct: 367 RHDVIVSIVTAAKKDLLLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYSLQSEAG 426
Query: 419 SINQNEFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDR 477
+ WI K+L Y +E + + P +R++ +++ D
Sbjct: 427 KEAAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETNERMKCLYYLYATLDS 486
Query: 478 IEMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKA 536
+KAL ++ + + L+ +++ + L +Q D + I K++ V++R+ +P KA
Sbjct: 487 NAVKALNEMWKCQNLLRHQVKDLVDLIKQPKTDASSKAIFSKVM----VITRNLPDPGKA 542
Query: 537 EENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILG-AKHRLYDFLSTLS 593
++ Q+ D + L L+ S QA ++ K LG K FL +
Sbjct: 543 QDFMKKFTQVLEDDEKIRSQLEMLVSPTCSCKQAEGCVREITKKLGNPKQPTNPFLEMIK 602
Query: 594 M---KCSYLLFNKEHVKEILLEVAAQ---------KSSANAQFMQSCMDILGILARFSPL 641
+ + + + E + ++ +V + Q +++ +++L +L+ P+
Sbjct: 603 FLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTHPI 662
Query: 642 LLGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGS 699
E E L+ LK ++E + E L + G I E S++ +L +G
Sbjct: 663 SFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKAKKGP 722
Query: 700 RRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVF 757
RQAKYA+H + AI + + +++ L L+ HL L ++G IA A F
Sbjct: 723 PRQAKYAIHCINAIFSSKETQ-FAQIFEPLHKSLDPSNFEHLITPLVTIGHIAMLAPDQF 781
Query: 758 ETR-ESEIEEFIKSKILRCSNKIRNDTKACW---DDRSELCLLKIYGIKTLVKSYLPVKD 813
+S + FI +L T W ++ S L+KI IK +V+ L +K+
Sbjct: 782 AAPLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETLVKIQAIKMMVRWLLGMKN 841
Query: 814 AHIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPV 871
H + G L + + S G+++E + S D + LRLA+ A+++L+++ + I +
Sbjct: 842 NHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIITL 901
Query: 872 DVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYA--CAFLF-GITESKSPEFEEN 928
+ + L Q +++F K+H+ + L +Y CA + + +
Sbjct: 902 EQYQLCALAINDECYQVRQIFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQC 961
Query: 929 LADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELV 988
L I + + + +V S PEY++PY +H AH PD + +D++ + +
Sbjct: 962 LVKNINVRREYLKQHAAVSEKLLSL--LPEYVVPYTIHLLAHD--PDYVKVQDIEQLKDI 1017
Query: 989 YCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIV---DAAKSKNSHAIC 1045
L+FI+ +L+ K+E+ S + I + +IK ++D DA ++ + +C
Sbjct: 1018 KECLWFILEILMAKNEN--------NSHAFIRKMVENIKQTKDAQGPDDAKMNEKLYTVC 1069
Query: 1046 DLGLSI 1051
D+ ++I
Sbjct: 1070 DVAMNI 1075
>sp|Q4VA53|PDS5B_MOUSE Sister chromatid cohesion protein PDS5 homolog B OS=Mus musculus
GN=Pds5b PE=1 SV=1
Length = 1446
Score = 270 bits (691), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 265/1085 (24%), Positives = 488/1085 (44%), Gaps = 70/1085 (6%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNA---IVQPVLL 65
+KE+ K+ +K+ +V+ LK +++Q E + +LN + L
Sbjct: 19 VKEISDKI-----SKEEMVRRLKMVVKTFMDMDQDSE----EEKELYLNLALHLASDFFL 69
Query: 66 KHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRV 124
KH DKDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R
Sbjct: 70 KHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYF 129
Query: 125 VILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESE 183
+LE +A +S + +LE +E+ ++Y T F+V ++ H + V M +M ++ E +
Sbjct: 130 YLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGD 189
Query: 184 DIQEDLLVILLSAL---GRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSS-MSGDSRPG 239
+ ++LL +L L +N N A LA ++++ A +E I F M G +
Sbjct: 190 TVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSIS 249
Query: 240 HSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNE 299
++I ++Y +L V+P L +L ++ + RL+ V L+ +F S
Sbjct: 250 DLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSELAS 309
Query: 300 QFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVR 359
Q ++ +L R D V +R+ ++ CL+ P A + L R D +E +R
Sbjct: 310 QNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAK--DLTEYLKVRSHDPEEAIR 367
Query: 360 KQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGS 419
V+ I A + + + V ER DK V++ M LA I++ L++ G
Sbjct: 368 HDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYSLQSAAGK 427
Query: 420 INQNEFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRI 478
+ W+ K+L Y +E + + P +R++ +++ D
Sbjct: 428 DAAKQISWVKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYLYATLDLN 487
Query: 479 EMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAE 537
+KAL ++ + + L+ +++ L L +Q D I K++ V++R+ +P KA+
Sbjct: 488 AVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASVKAIFSKVM----VITRNLPDPGKAQ 543
Query: 538 ENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILG-AKHRLYDFLSTLSM 594
+ Q+ D + K L L+ S QA ++ K LG K FL +
Sbjct: 544 DFMKKFTQVLEDDEKIRKQLEALVSPTCSCKQAEGCVREITKKLGNPKQPTNPFLEMIKF 603
Query: 595 ---KCSYLLFNKEHVKEILLEVAAQ---------KSSANAQFMQSCMDILGILARFSPLL 642
+ + + + E + ++ +V + Q +++ +++L +L+ P+
Sbjct: 604 LLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTHPIS 663
Query: 643 LGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSR 700
E E L+ LK ++E + E L + G I E S++ +L +G
Sbjct: 664 FHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKSKKGPP 723
Query: 701 RQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFE 758
RQAKYA+H + AI + + +++ L L+ HL L ++G IA A F
Sbjct: 724 RQAKYAIHCIHAIFSSKETQ-FAQIFEPLHKSLDPSNLEHLITPLVTIGHIALLAPDQFA 782
Query: 759 TR-ESEIEEFIKSKILRCSNKIRNDTKACW---DDRSELCLLKIYGIKTLVKSYLPVKDA 814
+S + FI +L T W ++ S ++KI IK +V+ L +K+
Sbjct: 783 APLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMKNN 842
Query: 815 HIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVD 872
H + G L + + S G+++E + S D + LRLA+ A+++L+++ + I ++
Sbjct: 843 HSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIITLE 902
Query: 873 VFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYA--CAFLF-GITESKSPEFEENL 929
+ L Q +++F K+H+ + L +Y CA + + + L
Sbjct: 903 QYQLCALAINDECYQVRQVFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQCL 962
Query: 930 ADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVY 989
I + + + +V S PEY++PY +H AH PD + +D++ + V
Sbjct: 963 VKNITVRREYLKQHAAVSEKLLSL--LPEYVVPYTIHLLAHD--PDYVKVQDIEQLKDVK 1018
Query: 990 CRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIV---DAAKSKNSHAICD 1046
L+F++ +L+ K+E+ S + I + +IK ++D D ++ + +CD
Sbjct: 1019 ECLWFVLEILMAKNEN--------NSHAFIRKMVENIKQTKDAQGPDDTKMNEKLYTVCD 1070
Query: 1047 LGLSI 1051
+ ++I
Sbjct: 1071 VAMNI 1075
>sp|Q6TRW4|PDS5B_RAT Sister chromatid cohesion protein PDS5 homolog B OS=Rattus norvegicus
GN=Pds5b PE=2 SV=2
Length = 1447
Score = 270 bits (689), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 265/1085 (24%), Positives = 488/1085 (44%), Gaps = 70/1085 (6%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNA---IVQPVLL 65
+KE+ K+ +K+ +V+ LK +++Q E + +LN + L
Sbjct: 19 VKEISDKI-----SKEEMVRRLKMVVKTFMDMDQDSE----EEKELYLNLALHLASDFFL 69
Query: 66 KHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRV 124
KH DKDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R
Sbjct: 70 KHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYF 129
Query: 125 VILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESE 183
+LE +A +S + +LE +E+ ++Y T F+V ++ H + V M +M ++ E +
Sbjct: 130 YLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGD 189
Query: 184 DIQEDLLVILLSAL---GRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSS-MSGDSRPG 239
+ ++LL +L L +N N A LA ++++ A +E I F M G +
Sbjct: 190 TVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSIS 249
Query: 240 HSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNE 299
++I ++Y +L V+P L +L ++ + RL+ V L+ +F S
Sbjct: 250 DLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSELAS 309
Query: 300 QFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVR 359
Q ++ +L R D V +R+ ++ CL+ P A + L R D +E +R
Sbjct: 310 QNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAK--DLTEYLKVRSHDPEEAIR 367
Query: 360 KQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGS 419
V+ I A + + + V ER DK V++ M LA I++ L++ G
Sbjct: 368 HDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYALQSAAGK 427
Query: 420 INQNEFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRI 478
+ W+ K+L Y +E + + P +R++ +++ D
Sbjct: 428 DAAKQICWVKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYLYATLDLN 487
Query: 479 EMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAE 537
+KAL ++ + + L+ +++ L L +Q D I K++ V++R+ +P KA+
Sbjct: 488 AVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASVKAIFSKVM----VITRNLPDPGKAQ 543
Query: 538 ENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILG-AKHRLYDFLSTLSM 594
+ Q+ D + K L L+ S QA ++ K LG K FL +
Sbjct: 544 DFMKKFTQVLEDDEKIRKQLEALVSPTCSCKQAEGCVREITKKLGNPKQPTNPFLEMIKF 603
Query: 595 ---KCSYLLFNKEHVKEILLEVAAQ---------KSSANAQFMQSCMDILGILARFSPLL 642
+ + + + E + ++ +V + Q +++ +++L +L+ P+
Sbjct: 604 LLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTHPIS 663
Query: 643 LGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSR 700
E E L+ LK ++E + E L + G I E S++ +L +G
Sbjct: 664 FHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKSKKGPP 723
Query: 701 RQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFE 758
RQAKYA+H + AI + + +++ L L+ HL L ++G IA A F
Sbjct: 724 RQAKYAIHCIHAIFSSKETQ-FAQIFEPLHKSLDPSNLEHLITPLVTIGHIALLAPDQFA 782
Query: 759 TR-ESEIEEFIKSKILRCSNKIRNDTKACW---DDRSELCLLKIYGIKTLVKSYLPVKDA 814
+S + FI +L T W ++ S ++KI IK +V+ L +K+
Sbjct: 783 APLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMKNN 842
Query: 815 HIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVD 872
H + G L + + S G+++E + S D + LRLA+ A+++L+++ + I ++
Sbjct: 843 HSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIITLE 902
Query: 873 VFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYA--CAFLF-GITESKSPEFEENL 929
+ L Q +++F K+H+ + L +Y CA + + + L
Sbjct: 903 QYQLCALAINDECYQVRQVFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQCL 962
Query: 930 ADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVY 989
I + + + +V S PEY++PY +H AH PD + +D++ + V
Sbjct: 963 VKNITVRREYLKQHAAVSEKLLSL--LPEYVVPYTIHLLAHD--PDYVKVQDIEQLKDVK 1018
Query: 990 CRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIV---DAAKSKNSHAICD 1046
L+F++ +L+ K+E+ S + I + +IK ++D D ++ + +CD
Sbjct: 1019 ECLWFVLEILMAKNEN--------NSHAFIRKMVENIKQTKDAQGPDDTKMNEKLYTVCD 1070
Query: 1047 LGLSI 1051
+ ++I
Sbjct: 1071 VAMNI 1075
>sp|Q5U241|PD5BB_XENLA Sister chromatid cohesion protein PDS5 homolog B-B OS=Xenopus laevis
GN=pds5b-b PE=2 SV=2
Length = 1464
Score = 270 bits (689), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 258/1083 (23%), Positives = 492/1083 (45%), Gaps = 66/1083 (6%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNA---IVQPVLL 65
+KE+ K+ +K+ +V+ LK +++Q E + +LN + L
Sbjct: 19 VKEISDKI-----SKEEMVRRLKMVVKTFMDMDQDSE----EEKEQYLNLALHLASDFFL 69
Query: 66 KHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRV 124
KH DKDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R
Sbjct: 70 KHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYF 129
Query: 125 VILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESE 183
+LE +A +S + +LE C+E+ ++Y T F+V ++ H + V M +M ++ E +
Sbjct: 130 YLLENIAWVKSYNICFELEDCNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIVCEGD 189
Query: 184 DIQEDLL---VILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSS-MSGDSRPG 239
+ ++LL ++ L +N N A LA ++++ A +E I F M G +
Sbjct: 190 TVSQELLDSVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSIS 249
Query: 240 HSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNE 299
++I ++Y +L V+P L +L ++ + RL+ V L+ +F S
Sbjct: 250 DLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSELAS 309
Query: 300 QFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVR 359
Q ++ +L R D V +R+ ++ L+ P A + L R D +E +R
Sbjct: 310 QNKPLWQCYLGRFNDIHVPIRLECVKFASHSLMNHPDLAK--DLTEYLKVRSHDPEEAIR 367
Query: 360 KQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGS 419
V+ I A L + + + V ER DK V++ M LA I++ L+ G
Sbjct: 368 HDVIVSIVTAAKKDLLLVNDQLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYSLQVEAGK 427
Query: 420 INQNEFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRI 478
+ + WI K+L Y +E + + P +R++ +++ D
Sbjct: 428 ESAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYLYATLDTN 487
Query: 479 EMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAE 537
+KAL ++ + + L+ ++ L L ++ + + I K++ V++++ +P K +
Sbjct: 488 AVKALNEMWKCQNMLRHHVKDLLDLIKKPKTEAGSKAIFSKVM----VITKNLPDPGKGQ 543
Query: 538 ENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILG-AKHRLYDFLSTLSM 594
+ Q+ D + L L+ S+ QA D+ K LG K FL +
Sbjct: 544 DFLKKFTQVLEDDEKIRGQLEKLVSPTCSYKQAEVCVRDITKKLGNPKQPTNPFLEMIKF 603
Query: 595 ---KCSYLLFNKEHVKEILLEVAAQKSSANA----------QFMQSCMDILGILARFSPL 641
+ + + + E + L+++ + A Q +++ +++L +L+ P+
Sbjct: 604 LLERIAPVHIDTESISS-LIKLVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTHPI 662
Query: 642 LLGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGS 699
E E L+ LK ++E + E L + G I E S++ +L++ +GS
Sbjct: 663 SFHSAETFESLLACLKMDDEKVAEAALQIFKNTGNKIEEDFPHIRSALLPVLQQKAKKGS 722
Query: 700 RRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLE--EKTHLPAVLQSLGCIAQTAMPVF 757
RQAKY++H + AI + + +++ L L+ L L ++G IAQ A F
Sbjct: 723 PRQAKYSIHCIHAIFSSKETQ-FAQIFEPLHKSLDPGNPEQLITSLVTIGHIAQLAPDQF 781
Query: 758 ETR-ESEIEEFIKSKILRCSNKIRNDTKACW---DDRSELCLLKIYGIKTLVKSYLPVKD 813
+S + F+ +L T W D+ S+ ++KI IK +V+ L +K+
Sbjct: 782 TAPLKSMVATFVVKDLLMSDQLPGKKTTKLWVPDDEVSQETMVKIQAIKMMVRWLLGMKN 841
Query: 814 AHIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPV 871
+ G L + + + G+++E + S D + LRLA+ A+++L+++ + I +
Sbjct: 842 NLSKSGNSTLRLLTAILHTDGDLTEHGKLSKPDMSRLRLAAGSAIVKLAQEPCYHEIITL 901
Query: 872 DVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYA--CAFLF-GITESKSPEFEEN 928
+ + L Q ++LF K+H+ + L +Y CA + + +
Sbjct: 902 EQYQLCALVINDECYQVRQLFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQC 961
Query: 929 LADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELV 988
L I + + + +V F+ PEY++PY VH H PD + +D++ + +
Sbjct: 962 LVKNINVRREYLKQHAAVSEKL--FSLLPEYVVPYTVHLLTHD--PDYVKVQDIEQLKDI 1017
Query: 989 YCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIVDAAKSKNSHAICDLG 1048
L+F++ +L+ K+E+ ++ I ++ + K +++ D ++ + +CD+
Sbjct: 1018 KECLWFVLEILMSKNEN-----NSHAFIRKMVEYIKQTKDAQNPDDQKMNEKMYTVCDVA 1072
Query: 1049 LSI 1051
++I
Sbjct: 1073 MNI 1075
>sp|Q498H0|PD5BA_XENLA Sister chromatid cohesion protein PDS5 homolog B-A OS=Xenopus laevis
GN=pds5b-a PE=1 SV=1
Length = 1448
Score = 266 bits (680), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 261/1083 (24%), Positives = 490/1083 (45%), Gaps = 66/1083 (6%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNA---IVQPVLL 65
+KE+ K+ +K+ +V+ LK +++Q E + +LN + L
Sbjct: 19 VKEISDKI-----SKEEMVRRLKMVVKTFMDMDQDSE----EEKEQYLNLALHLASDFFL 69
Query: 66 KHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRV 124
KH DKDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R
Sbjct: 70 KHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFISRQLKGLEDTKSPQFNRYF 129
Query: 125 VILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESE 183
+LE +A +S + +LE +E+ ++Y T F+V ++ H + V M +M ++ E +
Sbjct: 130 YLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIVCEGD 189
Query: 184 DIQEDLL---VILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSS-MSGDSRPG 239
+ ++LL ++ L +N N A LA ++++ A +E I F M G +
Sbjct: 190 TVSQELLDSVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSIS 249
Query: 240 HSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNE 299
++I ++Y +L V+P L +L ++ + RL+ V L+ +F S
Sbjct: 250 DLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSELAS 309
Query: 300 QFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVR 359
Q +++ +L R D V VR+ ++ L+ P A + L R D +E +R
Sbjct: 310 QNKTLWQCYLGRFNDIHVPVRLECVKFASHSLVNHPDLAK--DLTDYLKVRSHDPEEAIR 367
Query: 360 KQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGS 419
V+ I A L + + + V ER DK V++ M LA I++ L+ G
Sbjct: 368 HDVIVSIVTAAKKDLLLVNDQLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYSLQAEAGK 427
Query: 420 INQNEFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRI 478
+ + WI K+L Y +E + + P +R++ +++ D
Sbjct: 428 ESAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYLYATLDTN 487
Query: 479 EMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAE 537
+KAL ++ + + L+ ++ L L ++ + + I K++ V++R+ +P K +
Sbjct: 488 AVKALNEMWKCQNMLRHHVKDLLDLIKKPKTEAGSKAIFSKVM----VITRNLPDPGKGQ 543
Query: 538 ENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILG-AKHRLYDFLSTLSM 594
+ Q+ D + L L+ S QA D+ K LG K FL +
Sbjct: 544 DFLKKFTQVLEDDEKIRGQLEKLVSPTCSCKQAEVCVRDITKKLGNPKQPTNPFLEMIKF 603
Query: 595 ---KCSYLLFNKEHVKEILLEVAAQKSSANA----------QFMQSCMDILGILARFSPL 641
+ + + + E + L+++ + A Q +++ +++L +L+ P+
Sbjct: 604 LLERIAPVHIDTESI-SALIKLVNKSIDGTADDEDEGVTTDQAIRAGLELLKVLSFTHPI 662
Query: 642 LLGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGS 699
E E L+ LK ++E + E L + G I E S++ +L++ +G
Sbjct: 663 SFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLQQKAKKGP 722
Query: 700 RRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLE--EKTHLPAVLQSLGCIAQTAMPVF 757
RQAKY++H + AI + + +++ L L+ L L S+G IAQ A F
Sbjct: 723 PRQAKYSIHCIQAIFSSKETQ-FAQIFEPLHKSLDPGNPEQLITSLVSIGHIAQLAPDQF 781
Query: 758 ETR-ESEIEEFIKSKILRCSNKIRNDTKACW---DDRSELCLLKIYGIKTLVKSYLPVKD 813
+S + F+ +L T W D+ S +KI IK +V+ L +K+
Sbjct: 782 TAPLKSMVATFVVKDLLMTDRLPGKKTTKLWVSDDEVSTETKVKIQAIKMMVRWLLGMKN 841
Query: 814 AHIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPV 871
+ G L ++ + + G+++E + S D + LRLA+A A+++L+++ + I +
Sbjct: 842 NLSKSGNSTLRLLMAILHTDGDLTEHGKLSKPDMSRLRLAAASAIVKLAQEPCYHEIITL 901
Query: 872 DVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYA--CAFLF-GITESKSPEFEEN 928
+ + L Q ++LF K+H+ + L +Y CA + + +
Sbjct: 902 EQYQLCALVINDECYQVRQLFAQKIHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQC 961
Query: 929 LADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELV 988
L I + + + +V F+ PEY++PY VH AH PD + +D++ + +
Sbjct: 962 LVKNINVRREYLKQHAAVSEKL--FSLLPEYVVPYTVHLLAHD--PDYVKVQDIEQLKDI 1017
Query: 989 YCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIVDAAKSKNSHAICDLG 1048
L+F++ +L+ K+E+ ++ I ++ + K ++ D ++ + +CD+
Sbjct: 1018 KECLWFVLEILMSKNEN-----NSHAFIRKMVEYIKQTKDGQNPDDQKMNEKMYTVCDVA 1072
Query: 1049 LSI 1051
++I
Sbjct: 1073 MNI 1075
>sp|Q29RF7|PDS5A_HUMAN Sister chromatid cohesion protein PDS5 homolog A OS=Homo sapiens
GN=PDS5A PE=1 SV=1
Length = 1337
Score = 254 bits (650), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 273/1092 (25%), Positives = 491/1092 (44%), Gaps = 84/1092 (7%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQ 68
+KE+ K+ T D ++K LK +++Q + + P + L++
Sbjct: 29 VKEITDKI-----TTDEMIKRLKMVVKTFMDMDQDSEDEKQQYL-PLALHLASEFFLRNP 82
Query: 69 DKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVIL 127
+KDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R +L
Sbjct: 83 NKDVRLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLL 142
Query: 128 ETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQ 186
E LA +S + +LE C+E+ +++ T F+V ++ H + V M +M ++ E + +
Sbjct: 143 ENLAWVKSYNICFELEDCNEIFIQLFRTLFSVINNSHNKKVQMHMLDLMSSIIMEGDGVT 202
Query: 187 EDLL---VILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMSGDSRPGHSHI 243
++LL +I L +N N + LA ++++ +EA I F + R S +
Sbjct: 203 QELLDSILINLIPAHKNLNKQSFDLAKVLLKRTVQTIEACIANFFNQVLVL-GRSSVSDL 261
Query: 244 DYH--EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQF 301
H ++I +++ P +L V+P L +L ++ + RL V L+ LF S Q
Sbjct: 262 SEHVFDLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLATQN 321
Query: 302 HSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDENVRK 360
++ FL R D V VR+ ++ CL+ P A D + L R D +E +R
Sbjct: 322 RPLWQCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKDLTEYLKV---RSHDPEEAIRH 378
Query: 361 QVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSI 420
V+ I A L + + + V ER DK V++ M LA +++ CL G
Sbjct: 379 DVIVTIITAAKRDLALVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLYKKYCLHGEAGKE 438
Query: 421 NQNEFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIE 479
+ WI K+L Y +E + L P ++R++ +++ D
Sbjct: 439 AAEKVSWIKDKLLHIYYQNSIDDKLLVEKIFAQYLVPHNLETEERMKCLYYLYASLDPNA 498
Query: 480 MKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEE 538
+KAL ++ + + L+ ++ L L +Q + + + K++ ++++ +P KA++
Sbjct: 499 VKALNEMWKCQNMLRSHVRELLDLHKQPTSEANCSAMFGKLM----TIAKNLPDPGKAQD 554
Query: 539 NFLILDQ-LKDANVWKILMNLLDSNT-SFDQA-FTGRDDLLKILGAKHRLYDFLSTLSM- 594
+Q L D + + LL S T S QA R+ K+ K FL +
Sbjct: 555 FVKKFNQVLGDDEKLRSQLELLISPTCSCKQADICVREIARKLANPKQPTNPFLEMVKFL 614
Query: 595 --KCSYLLFNKEHVKEIL------LEVAA---QKSSANAQFMQSCMDILGILARFSPLLL 643
+ + + + E + ++ +E A ++ + ++S +++L +L+ P
Sbjct: 615 LERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDTAIRSGLELLKVLSFTHPTSF 674
Query: 644 GGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRR 701
E E L+ L+ E++ + E + + G I L S++ +L + G+
Sbjct: 675 HSAETYESLLQCLRMEDDKVAEAAIQIFRNTGHKIETDLPQIRSTLIPILHQKAKRGTPH 734
Query: 702 QAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFET 759
QAK AVH + AI + ++ L+ +++ L L L L SLG I+ A F +
Sbjct: 735 QAKQAVHCIHAIFTNKEVQ-LAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPDQFAS 793
Query: 760 -RESEIEEFIKSKILRCSNKIRNDTKACWDDRSEL---CLLKIYGIKTLVKSYLPVKDAH 815
+S + FI +L W E+ L K+ IK LV+ L +K+
Sbjct: 794 PMKSVVANFIVKDLLMNDRSTGEKNGKLWSPDEEVSPEVLAKVQAIKLLVRWLLGMKNNQ 853
Query: 816 IRPGIDDLLGILKSML-SYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVD 872
+ + L +L +ML S G+++E S D + LRLA+ A+++L+++ + I +
Sbjct: 854 SKSA-NSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRLAAGSAIMKLAQEPCYHEIITPE 912
Query: 873 VFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEENLADI 932
F L Q +++F K+H+ + LL +Y F +K P E
Sbjct: 913 QFQLCALVINDECYQVRQIFAQKLHKALVKLLLPLEYMAIFALC---AKDPVKER----- 964
Query: 933 IQMH-HQMKARQISVQSD---ANSFAT------YPEYIIPYLVHTFAHHSCPDIDECKDV 982
+ H Q + IS++ + N AT PEY++PY++H AH PD +DV
Sbjct: 965 -RAHARQCLLKNISIRREYIKQNPMATEKLLSLLPEYVVPYMIHLLAHD--PDFTRSQDV 1021
Query: 983 KAFELVYCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIVDAAKSKNS- 1041
+ L+F++ +L+ K+E+ S + + + +IK + D +SK +
Sbjct: 1022 DQLRDIKECLWFMLEVLMTKNEN--------NSHAFMKKMAENIKLTRDAQSPDESKTNE 1073
Query: 1042 --HAICDLGLSI 1051
+ +CD+ L +
Sbjct: 1074 KLYTVCDVALCV 1085
>sp|A4L9P7|PDS5A_RAT Sister chromatid cohesion protein PDS5 homolog A OS=Rattus norvegicus
GN=Pds5a PE=2 SV=1
Length = 1333
Score = 254 bits (650), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 272/1092 (24%), Positives = 491/1092 (44%), Gaps = 84/1092 (7%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQ 68
+KE+ K+ T D ++K LK +++Q + + P + L++
Sbjct: 28 VKEITDKI-----TTDEMIKRLKMVVKTFMDMDQDSEDEKQQYL-PLALHLASEFFLRNP 81
Query: 69 DKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVIL 127
+KDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R +L
Sbjct: 82 NKDVRLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLL 141
Query: 128 ETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQ 186
E LA +S + +LE C+E+ +++ T F+V ++ H + V M +M ++ E + +
Sbjct: 142 ENLAWVKSYNICFELEDCNEIFIQLFRTLFSVINNSHNKKVQMHMLDLMSSIIMEGDGVT 201
Query: 187 EDLL---VILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMSGDSRPGHSHI 243
++LL +I L +N N + LA ++++ +EA I F + R S +
Sbjct: 202 QELLDSILINLIPAHKNLNKQSFDLAKVLLKRTVQTIEACIANFFNQVLVL-GRSSVSDL 260
Query: 244 DYH--EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQF 301
H ++I +++ P +L V+P L +L ++ + RL V L+ LF S Q
Sbjct: 261 SEHVFDLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLATQN 320
Query: 302 HSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDENVRK 360
++ FL R D V VR+ ++ CL+ P A D + L R D +E +R
Sbjct: 321 RPLWQCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKDLTEYLKV---RSHDPEEAIRH 377
Query: 361 QVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSI 420
V+ I A L + + + V ER DK V++ M LA +++ CL G
Sbjct: 378 DVIVTIITAAKRDLALVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLYKKYCLHGEAGKE 437
Query: 421 NQNEFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIE 479
+ WI K+L Y +E + L P ++R++ +++ D
Sbjct: 438 AAEKVSWIKDKLLHIYYQNSIDDKLLVEKIFAQYLVPHNLETEERMKCLYYLYASLDPNA 497
Query: 480 MKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEE 538
+KAL ++ + + L+ ++ L L +Q + + + K++ ++++ +P KA++
Sbjct: 498 VKALNEMWKCQNMLRSHVRELLDLHKQPTSEANCSAMFGKLM----TIAKNLPDPGKAQD 553
Query: 539 NFLILDQ-LKDANVWKILMNLLDSNT-SFDQA-FTGRDDLLKILGAKHRLYDFLSTLSM- 594
+Q L D + + LL S T S QA R+ K+ K FL +
Sbjct: 554 FVKKFNQVLGDDEKLRSQLELLISPTCSCKQADICVREIARKLANPKQPTNPFLEMVKFL 613
Query: 595 --KCSYLLFNKEHVKEIL------LEVAA---QKSSANAQFMQSCMDILGILARFSPLLL 643
+ + + + E + ++ +E A ++ + ++S +++L +L+ P
Sbjct: 614 LERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDSAIRSGLELLKVLSFTHPTSF 673
Query: 644 GGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRR 701
E E L+ L+ E++ + E + + G I L S++ +L + G+
Sbjct: 674 HSAETYESLLQCLRMEDDKVAEAAIQIFRNTGHKIETDLPQIRSTLIPILHQKAKRGTPH 733
Query: 702 QAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFET 759
QAK AVH + AI + ++ L+ +++ L L L L SLG I+ A F +
Sbjct: 734 QAKQAVHCIHAIFSNKEVQ-LAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPDQFAS 792
Query: 760 -RESEIEEFIKSKILRCSNKIRNDTKACWDDRSEL---CLLKIYGIKTLVKSYLPVKDAH 815
+S + FI +L W E+ L K+ IK LV+ L +K+
Sbjct: 793 PMKSVVANFIVKDLLMNDRSTGEKNGKLWSPDEEVSPEVLAKVQAIKLLVRWLLGMKNNQ 852
Query: 816 IRPGIDDLLGILKSML-SYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVD 872
+ + L +L +ML S G+++E S D + LRLA+ A+++L+++ + I +
Sbjct: 853 SKSA-NSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRLAAGSAIMKLAQEPCYHEIITPE 911
Query: 873 VFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEENLADI 932
F L Q +++F K+H+ + LL +Y F +K P E
Sbjct: 912 QFQLCALVINDECYQVRQIFAQKLHKALVKLLLPLEYMAIFALC---AKDPVKER----- 963
Query: 933 IQMH-HQMKARQISVQSD---ANSFAT------YPEYIIPYLVHTFAHHSCPDIDECKDV 982
+ H Q + IS++ + N AT PEY++PY++H AH PD +DV
Sbjct: 964 -RAHARQCLLKNISIRREYIKQNPMATEKLLSLLPEYVVPYMIHLLAHD--PDFTRSQDV 1020
Query: 983 KAFELVYCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIVDAAKSKNS- 1041
+ L+F++ +L+ K+E+ S + + + +IK + D ++K +
Sbjct: 1021 DQLRDIKECLWFMLEVLMTKNEN--------NSHAFMKKMAENIKLTRDAQSPDEAKTNE 1072
Query: 1042 --HAICDLGLSI 1051
+ +CD+ L +
Sbjct: 1073 KLYTVCDVALCV 1084
>sp|A1L1F4|PDS5A_DANRE Sister chromatid cohesion protein PDS5 homolog A OS=Danio rerio
GN=pds5a PE=2 SV=1
Length = 1320
Score = 253 bits (645), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 260/1066 (24%), Positives = 482/1066 (45%), Gaps = 68/1066 (6%)
Query: 64 LLKHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGR 122
L++ +KDV+LLVA C+ +I RI APEAPY S D LK+IF I GL+DT P F R
Sbjct: 73 FLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKEIFLFITRQLKGLEDTKSPQFNR 132
Query: 123 RVVILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEE 181
+LE LA +S + +LE C+E+ +++ T F+V ++ H + V M +M ++ E
Sbjct: 133 YFYLLENLAWVKSYNICFELEDCNEIFIQLFKTLFSVINNSHNQKVQMHMLDLMSSIIME 192
Query: 182 SEDIQEDLL---VILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSM-SGDSR 237
+ + ++LL +I L +N N A LA ++++ +E I F + G S
Sbjct: 193 GDGVTQELLDTILINLIPAHKNLNKQAYDLARTLLKRTVQTIETCIASFFNQVLVMGKSS 252
Query: 238 PGHSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSAN 297
++I +++ P +L V+P L +L ++ + RL V L+ LF S
Sbjct: 253 VSDLSEHVFDLIQELFAIDPLLLVSVMPQLEFKLKSNDGEERLAVVKLLAKLFGAKDSEL 312
Query: 298 NEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDE 356
Q ++ FL R D V VR+ ++ CL+ P A D + L R D +E
Sbjct: 313 ATQNRPLWQCFLGRFNDIHVPVRLECVKFASHCLMNHPDLAKDLTEFLKV---RSHDPEE 369
Query: 357 NVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNF 416
+R V+ I + LN + + + V ER+ DK V++ M LA +F+ CL +
Sbjct: 370 AIRHDVIVTIINAGKKDLNLVNDQLLGFVRERMLDKRWRVRKEAMMGLAQLFKKYCLHHE 429
Query: 417 NGSINQNEFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGF 475
G + + WI K+L Y +E + + P +++++ +++
Sbjct: 430 AGKESALKISWIKDKLLHIYYQNSIDDKLLVEKIFAQYMVPHSLETEEKMKCLYYLYACL 489
Query: 476 DRIEMKALEKILEQKQRLQQEMQRYLSLRQMHQDGDAPEIQKKILFC-FRVMSRSFAEPA 534
D +KAL ++ + + L+ ++ L L ++ E +F ++++ +P
Sbjct: 490 DTNAVKALNEMWKCQNMLRGLVRELLDLHKL----PTSEANTSAMFGKLMTIAKNLPDPG 545
Query: 535 KAEENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTG-RDDLLKILGAKHRLYDFLST 591
KA++ +Q+ +D + L L+ S QA R+ K+ K FL
Sbjct: 546 KAQDFMKKFNQVLGEDEKLRLQLEQLISPTCSCKQAEQCVREITRKLTFPKQPTNPFLEM 605
Query: 592 LSM---KCSYLLFNKEHVKEI--LLEVAAQKSSANA-------QFMQSCMDILGILARFS 639
+ + + + + E + + LL + + ++ + +++ +++L +L+
Sbjct: 606 VKFLLERIAPVHIDSEAISALVKLLNKSIEGTADDEDEGVTPDTAIRAGLELLKVLSFTH 665
Query: 640 PLLLGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLE 697
P E E L+ LK E++ + E + + G I +L S++ +L +
Sbjct: 666 PTAFHSAETYESLLQCLKMEDDKVAEAAIQIFRNTGQKIETELPQIRSTLIPILHQKAKR 725
Query: 698 GSRRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMP 755
G+ QAK AVH + AI + ++ L+ +++ L L L L SLG I+ A
Sbjct: 726 GTPHQAKQAVHCIHAIFHNKEVQ-LAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPD 784
Query: 756 VFET-RESEIEEFIKSKILRCSNKIRNDTKACW---DDRSELCLLKIYGIKTLVKSYLPV 811
F + +S + FI +L + N W D+ S L K+ IK LV+ L +
Sbjct: 785 QFASPMKSIVANFIVKDLLMNDRSVGNKNGRLWTADDEVSPEVLAKVQAIKLLVRWLLGM 844
Query: 812 KDAHIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKI 869
K+ + L ++S G+++E + S D + LRLA+ A+L+L+++ + I
Sbjct: 845 KNNQSKSANSTLRLPSAMLVSEGDLTEQKKISKSDMSRLRLAAGSAILKLAQEPCYHDII 904
Query: 870 PVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEENL 929
+ F L Q ++++ K+H + LL +Y F +K P E
Sbjct: 905 TPEQFQLCGLVINDECYQVRQIYAQKLHVALVKLLLPLEYMAVFALC---AKDPVKERRA 961
Query: 930 ADIIQMHHQMKARQISVQSDANS----FATYPEYIIPYLVHTFAHHSCPDIDECKDVKAF 985
+ + R+ ++ + + + PEY++PY++H AH PD+ + +D++
Sbjct: 962 HARQCLLKNISVRREYIKQNPMAHEKLLSLLPEYVVPYMIHLLAHD--PDLTKPQDLEQL 1019
Query: 986 ELVYCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIV---DAAKSKNSH 1042
V L+F++ +L+ K+E+ S S + + +IK ++D D ++ +
Sbjct: 1020 RDVKECLWFMLEVLMTKNEN--------NSHSFLRKMVENIKQTKDAQCPDDPKANEKLY 1071
Query: 1043 AICDLGLSI--TKRLSRMEDNSQGVFSSVSLPSTLYKPYEKKEGDD 1086
+CD+ L + K S D+ + LPS Y P +K+ +D
Sbjct: 1072 IVCDVALFVIANKSTSCHLDSPKDPV----LPSKFYTPPDKEFVND 1113
>sp|Q5F3V3|PDS5A_CHICK Sister chromatid cohesion protein PDS5 homolog A OS=Gallus gallus
GN=PDS5A PE=2 SV=2
Length = 1330
Score = 250 bits (639), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 266/1081 (24%), Positives = 483/1081 (44%), Gaps = 65/1081 (6%)
Query: 13 GSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQDKDV 72
G K T T D +VK LK +++Q + + P + L++ +KDV
Sbjct: 22 GVKETTDKITNDEVVKRLKMVVKTFMDMDQDSEDEKQQYL-PLALHLASEFFLRNPNKDV 80
Query: 73 KLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVILETLA 131
+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R +LE LA
Sbjct: 81 RLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLA 140
Query: 132 KYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQEDLL 190
+S + +LE C+E+ +++ T F+V ++ H + V M +M ++ E + + ++LL
Sbjct: 141 WVKSYNICFELEDCNEIFIQLFRTLFSVINNSHNQKVQMHMLDLMSSIIMEGDGVTQELL 200
Query: 191 ---VILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMS-GDSRPGHSHIDYH 246
+I L +N N A LA ++++ +E I F + G S
Sbjct: 201 DSILINLIPAHKNLNKQAFDLAKVLLKRTVQTIEPCIANFFNQVLVLGKSSVSDLSEHVF 260
Query: 247 EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFS 306
++I +++ P +L V+P L +L ++ + RL V L+ LF S Q ++
Sbjct: 261 DLILELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLATQNRPLWQ 320
Query: 307 EFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDENVRKQVVAV 365
FL R D V VR+ ++ CL+ P A D + L R D +E +R V+
Sbjct: 321 CFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKDLTEYLKV---RSHDPEEAIRHDVIVT 377
Query: 366 ICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSINQNEF 425
I L+ + + + V ER DK V++ M LA +++ CL G +
Sbjct: 378 IITAGKRDLSLVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLYKKYCLHAEAGKDAAEKV 437
Query: 426 EWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEMKALE 484
WI K+L Y +E + L P ++R++ +++ D +KAL
Sbjct: 438 SWIKDKLLHIYYQNSIDDKLLVEKIFAQYLVPHNLETEERMKCLYYLYASLDPNAVKALN 497
Query: 485 KILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEENFLIL 543
++ + + L+ ++ L L +Q + ++ + K++ ++++ +P KA++
Sbjct: 498 EMWKCQNMLRSHVRELLDLHKQPTSEANSAAMFGKLM----TIAKNLPDPGKAQDFVKKF 553
Query: 544 DQ-LKDANVWKILMNLLDSNT-SFDQA-FTGRDDLLKILGAKHRLYDFLSTLSM---KCS 597
+Q L D + + LL S T S QA R+ K+ K FL + + +
Sbjct: 554 NQVLGDDEKLRSQLELLISPTCSCKQADVCVREIARKLANPKQPTNPFLEMVKFLLERIA 613
Query: 598 YLLFNKEHVKEIL------LEVAA---QKSSANAQFMQSCMDILGILARFSPLLLGGTE- 647
+ + E + ++ +E A ++ + +++ +++L +L+ P E
Sbjct: 614 PVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDTAIRAGLELLKVLSFTHPTSFHSAET 673
Query: 648 -EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYA 706
E L+ L+ E++ + E + + G I L S++ +L + G+ QAK A
Sbjct: 674 YESLLQCLRMEDDKVAEAAIQIFRNTGHKIETDLPQIRSTLIPILHQKAKRGTPHQAKQA 733
Query: 707 VHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFET-RESE 763
VH + AI + ++ L+ +++ L L L L SLG I+ A F + +S
Sbjct: 734 VHCIHAIFSNKEVQ-LAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPDQFASPMKSV 792
Query: 764 IEEFIKSKILRCSNKIRNDTKACWDDRSEL---CLLKIYGIKTLVKSYLPVKDAHIRPGI 820
+ F+ +L W E+ L K+ IK LV+ L +K+ +
Sbjct: 793 VANFVVKDLLMNDRSTGEKNGKLWSPDEEVSPEVLAKVQAIKLLVRWLLGMKNNQSKSA- 851
Query: 821 DDLLGILKSML-SYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDVFHLT 877
+ L +L +ML S G+++E S D + LRLA+ A+++L+++ + I + F L
Sbjct: 852 NSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRLAAGSAIMKLAQEPCYHEIITPEQFQLC 911
Query: 878 LRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSP--EFEENLADIIQM 935
Q +++F K+H+ + LL +Y F +K P E + +
Sbjct: 912 ALVINDECYQVRQIFAQKLHKALVKLLLPLEYMAIFALC---AKDPVKERRAHARQCLLK 968
Query: 936 HHQMKARQISVQSDANS--FATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYCRLY 993
+ ++ I AN + PEY++PY++H AH PD + +DV V L+
Sbjct: 969 NISIRREYIKQNPMANEKLLSLLPEYVVPYMIHLLAHD--PDFTKPQDVDQLRDVKECLW 1026
Query: 994 FIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIVDAAKSKNS---HAICDLGLS 1050
F++ +L+ K+E+ S + + + +IK + D + K + + +CD+ L
Sbjct: 1027 FMLEVLMTKNEN--------NSHAFMKKMAENIKLTRDAQSPDEPKANEKLYTVCDVALC 1078
Query: 1051 I 1051
+
Sbjct: 1079 V 1079
>sp|Q6A026|PDS5A_MOUSE Sister chromatid cohesion protein PDS5 homolog A OS=Mus musculus
GN=Pds5a PE=3 SV=3
Length = 1332
Score = 248 bits (632), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 273/1092 (25%), Positives = 492/1092 (45%), Gaps = 84/1092 (7%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQ 68
+KE+ K+ T D ++K LK +++Q + + P + L++
Sbjct: 28 VKEITDKI-----TTDEMIKRLKMVVKTFMDMDQDSEDEKQQYL-PLALHLASEFFLRNP 81
Query: 69 DKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVIL 127
+KDV+LLVA C+ +I RI APEAPY S D LKDIF I GL+DT P F R +L
Sbjct: 82 NKDVRLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLL 141
Query: 128 ETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQ 186
E LA +S + +LE C+E+ +++ T F+V ++ H V M +M ++ E + +
Sbjct: 142 ENLAWVKSYNICFELEDCNEIFIQLFRTLFSVINNSHNTKVQMHMLDLMSSIIMEGDGVT 201
Query: 187 EDLL---VILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMSGDSRPGHSHI 243
++LL +I L +N N + LA ++++ +EA I F + R S +
Sbjct: 202 QELLDSILINLIPAHKNLNKQSFDLAKVLLKRTVQTIEACIANFFNQVLVL-GRSSVSDL 260
Query: 244 DYH--EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQF 301
H ++I +++ PQ+L V+P L +L ++ + RL V L+ LF S Q
Sbjct: 261 SEHVFDLIQELFAIDPQLLLSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLATQN 320
Query: 302 HSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDENVRK 360
++ FL R D V VR+ ++ CL+ P A D + L R D +E +R
Sbjct: 321 RPLWQCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKDLTEYLKV---RSHDPEEAIRH 377
Query: 361 QVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSI 420
V+ I A L + + + V ER DK V++ M LA +++ CL G
Sbjct: 378 DVIVTIITAAKRDLALVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLYKKYCLHGEAGKE 437
Query: 421 NQNEFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIE 479
+ WI K+L Y +E + L P ++R++ +++ D
Sbjct: 438 AAEKVSWIKDKLLHIYYQNSIDDKLLVEKIFAQYLVPHNLETEERMKCLYYLYASLDPNA 497
Query: 480 MKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEE 538
+KAL ++ + + L+ ++ L L +Q + + + K++ ++++ +P KA++
Sbjct: 498 VKALNEMWKCQNMLRSHVRELLDLHKQPTSEANCSAMFGKLM----TIAKNLPDPGKAQD 553
Query: 539 NFLILDQ-LKDANVWKILMNLLDSNT-SFDQA-FTGRDDLLKILGAKHRLYDFLSTLSM- 594
+Q L D + + LL S T S QA R+ K+ K FL +
Sbjct: 554 FVKKFNQVLGDDEKLRSQLELLISPTCSCKQADVCVREIARKLANPKQPTNPFLEMVKFL 613
Query: 595 --KCSYLLFNKEHVKEIL------LEVAA---QKSSANAQFMQSCMDILGILARFSPLLL 643
+ + + + E + ++ +E A ++ + ++S +++L +L+ P
Sbjct: 614 LERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDSAIRSGLELLKVLSFTHPTSF 673
Query: 644 GGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRR 701
E E L+ L+ E++ + E + + G I L S++ +L + G+
Sbjct: 674 HSAETYESLLQCLRMEDDKVAEAAIQIFRNTGHKIETDLPQIRSTLIPILHQKAKRGTPH 733
Query: 702 QAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFET 759
QAK AVH + AI + ++ L+ +++ L L L L SLG I+ A F +
Sbjct: 734 QAKQAVHCIHAIFSNKEVQ-LAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPDQFAS 792
Query: 760 -RESEIEEFIKSKILRCSNKIRNDTKACWDDRSEL---CLLKIYGIKTLVKSYLPVKDAH 815
+S + FI +L W E+ L K+Y ++ LV+ L +K+
Sbjct: 793 PMKSVVANFIVKDLLMNDRSTGEKNGKLWSPDEEVSPEVLAKVYLLRLLVRWLLGMKNNQ 852
Query: 816 IRPGIDDLLGILKSML-SYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVD 872
+ + L +L +ML S G+++E S D + LRLA+ A+++L+++ + I +
Sbjct: 853 SKSA-NSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRLAAGSAIMKLAQEPCYHEIITPE 911
Query: 873 VFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEENLADI 932
F L Q +++F K+H+ + LL +Y F +K P E
Sbjct: 912 QFQLCALVINDECYQVRQIFAQKLHKALVKLLLPLEYMAIFALC---AKDPVKER----- 963
Query: 933 IQMH-HQMKARQISVQSD---ANSFAT------YPEYIIPYLVHTFAHHSCPDIDECKDV 982
+ H Q + IS++ + N AT PEY++PY++H AH PD +DV
Sbjct: 964 -RAHARQCLLKNISIRREYIKQNPMATEKLLSLLPEYVVPYMIHLLAHD--PDFTRSQDV 1020
Query: 983 KAFELVYCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIVDAAKSKNS- 1041
+ L+F++ +L+ K+E+ S + + + +IK + D +SK +
Sbjct: 1021 DQLRDIKECLWFMLEVLMTKNEN--------NSHAFMKKMAENIKLTRDAQSPDESKTNE 1072
Query: 1042 --HAICDLGLSI 1051
+ +CD+ L +
Sbjct: 1073 KLYTVCDVALCV 1084
>sp|Q4QXM3|PD5AA_XENLA Sister chromatid cohesion protein PDS5 homolog A-A OS=Xenopus laevis
GN=pds5a-a PE=1 SV=1
Length = 1323
Score = 245 bits (626), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 306/1306 (23%), Positives = 569/1306 (43%), Gaps = 117/1306 (8%)
Query: 13 GSKLETPPSTK--------DGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVL 64
G + PP K D +VK LK +++Q + + P +
Sbjct: 12 GKSIIYPPGVKEITDKISNDEVVKRLKMVVKTYMDMDQDSEEEKQQYL-PLALHLSSEFF 70
Query: 65 LKHQDKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRR 123
L++ +KDV+LLVA C+ +I RI APEAPY S D LK+IF I GL+DT P F R
Sbjct: 71 LRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKEIFLFITRQLKGLEDTKSPQFNRY 130
Query: 124 VVILETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEES 182
+LE LA +S + +LE C+E+ +++ T F+V ++ H + V M +M + E
Sbjct: 131 FYLLENLAWVKSYNICFELEDCNEIFIQLFKTLFSVINNSHNQKVQMHMLDLMSSITMEG 190
Query: 183 EDI---QEDLLVILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMS-GDSRP 238
+ + Q D ++I L + +N N A LA ++++ A +E I F + G S
Sbjct: 191 DGVTQEQLDSILINLISAHKNLNKQAFDLAKVLLKRTAQTIEPCIANFFNQVLVLGKSSV 250
Query: 239 GHSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANN 298
++I +++ P +L V+P L +L ++ + RL V L+ LF S
Sbjct: 251 SDLSEHVFDLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLA 310
Query: 299 EQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDEN 357
Q ++ FL R D V VR+ ++ CL+ P A D + L R D +E
Sbjct: 311 TQNRPLWQCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKDLTEFLKV---RSHDPEEA 367
Query: 358 VRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFN 417
+R V+ I A L + + + V ER DK V++ M LA +++ CL
Sbjct: 368 IRHDVIVTIITAAKKDLFLVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLYKKYCLHGEG 427
Query: 418 GSINQNEFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFD 476
G + WI K+L Y +E + L P ++R++ +++ D
Sbjct: 428 GKDAAEKVSWIKDKLLHIYYQNSIDDKLLVEKIFAQQLVPHNLETEERMKCLYYLYASLD 487
Query: 477 RIEMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAK 535
+KAL ++ + + L+ ++ L L +Q + + + K++ ++++ +P K
Sbjct: 488 PNAVKALNEMWKCQNMLRSHVRELLDLHKQPTSEANTTAMFAKLM----TVAKNLPDPGK 543
Query: 536 AEENFLILDQL--KDANVWKILMNLLDSNTSFDQA-FTGRDDLLKILGAKHRLYDFLSTL 592
A++ +Q+ +D + L L+ + S QA RD K+ K FL +
Sbjct: 544 AQDFVKKFNQVLGEDEKLRSQLEVLISPSCSCKQADVCVRDIARKVANPKQPTNPFLEMV 603
Query: 593 SM---KCSYLLFNKEHVKEIL------LEVAA---QKSSANAQFMQSCMDILGILARFSP 640
+ + + + E + ++ +E A ++ + +++ +++L +L+ P
Sbjct: 604 KFLLERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDSAIRAGLELLKVLSFTHP 663
Query: 641 LLLGG--TEEELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEG 698
T E L+ L+ E++ + E + + G I L S++ +L + G
Sbjct: 664 TSFHSDETYESLLQCLRMEDDKVAEAAIQIFRNTGHRIETDLPQIRSALIPILHQKAKRG 723
Query: 699 SRRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPV 756
+ QAK AVH + +I + ++ L+ +++ L L L L SLG I+ A
Sbjct: 724 TPHQAKQAVHCIHSIFSNKEVQ-LAQIFEPLSRSLNADVPEQLVTPLVSLGHISMLAPDQ 782
Query: 757 FET-RESEIEEFIKSKILRC--SNKIRNDTKACWDDR-SELCLLKIYGIKTLVKSYLPVK 812
F + +S + FI +L SN +N C D+ S L K IK LV+ L +K
Sbjct: 783 FASPMKSVVANFIVKDLLMNDRSNGDKNGKLWCPDEEVSPEVLAKGQAIKLLVRWLLGMK 842
Query: 813 DAHIRPGIDDLLGILKSML-SYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKI 869
+ + + L +L +ML S G+++E S D + LRLA+ A+++L+++ + I
Sbjct: 843 NNQSKSA-NSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRLAAGAAIMKLAQEPCYHEII 901
Query: 870 PVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLF----GITESKSPEF 925
+ F L Q +++F K+H+ + L +Y F + E ++
Sbjct: 902 TPEQFQLCALVINDECYQVRQIFAQKLHKALVKLQLPLEYMAIFALCAKDPVKERRAHAR 961
Query: 926 EENLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAF 985
+ L +I +K + S+ + PEY++PY++H AH PD + +D+
Sbjct: 962 QCLLKNISIRREYIKQNPV---SNEKLLSLLPEYVVPYMIHLLAHD--PDFTKPQDIDQL 1016
Query: 986 ELVYCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIV---DAAKSKNSH 1042
+ L+F++ +L+ K+E+ S + + + +IK + D D ++
Sbjct: 1017 RDIKECLWFMLEVLMTKNEN--------NSHAFMKKLCENIKQTRDAQAPDDPKANEKLF 1068
Query: 1043 AICDLGLSITKRLSRMEDNSQGVFSSVS----LPSTLYKPYEKKEGDDSLASERQTWLAD 1098
+CD+ L + + + S S S LP T + + D +S ++++ D
Sbjct: 1069 TVCDVALCV------VYNKSAPCHSESSKDPVLPLTFF-----TQPDKDFSS--KSYITD 1115
Query: 1099 ES--VLTHFESLKLETHEVVGSEIARHEALDDLEKDGNEVPLGKMIQQLKSQGAKGGKAK 1156
E+ +L + + +V + G+E+ I + + A
Sbjct: 1116 EARNLLLTGKPKPMTVLGMVNKPLNATGRRPYSRSTGSEISNNVSI----NSESDASVAN 1171
Query: 1157 KKKSSPAEVKGTENDVDILQMV------------REINLDNLGVLNKFESSNGHKHFPSK 1204
++ S E+ +END + ++++ +E+NLD N + G K +
Sbjct: 1172 RQSSEVPEIGVSENDENPVRLISVPPAKTETVKNKEVNLDQTAPSNT-GTERGKKRSAAS 1230
Query: 1205 QIKVDLENEEIKKRKATDVTSFPVPKRRRSLSAHGGFRTPKSNSKA 1250
++ E +++KA ++++ P PK RR R PKS S+
Sbjct: 1231 AGAENIRKES-EEKKADNISATPTPKPRRG-------RPPKSESQG 1268
>sp|Q4KLU7|PD5AB_XENLA Sister chromatid cohesion protein PDS5 homolog A-B OS=Xenopus laevis
GN=pds5a-b PE=1 SV=1
Length = 1323
Score = 244 bits (623), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 264/1086 (24%), Positives = 488/1086 (44%), Gaps = 70/1086 (6%)
Query: 9 LKEVGSKLETPPSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQ 68
+KE+ K+ + D +VK LK +++Q + + P + L++
Sbjct: 21 VKEITDKI-----SNDEVVKRLKMVVKTFMDMDQDSEEEKQQYL-PLALHLSSDFFLRNP 74
Query: 69 DKDVKLLVATCICEITRITAPEAPY-SDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVIL 127
+KDV+LLVA C+ +I RI APEAPY S D LK+IF I GL+DT P F R +L
Sbjct: 75 NKDVRLLVACCLADIFRIYAPEAPYTSHDKLKEIFLFITRQLKGLEDTKSPQFNRYFYLL 134
Query: 128 ETLAKYRSCVVMLDLE-CDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDI- 185
E LA +S + +LE C+E+ +++ T F+V ++ H + V M +M + E + +
Sbjct: 135 ENLAWVKSYNICFELEDCNEIFIQLFKTLFSVINNSHNQKVQMHMLDLMSSITMEGDGVT 194
Query: 186 --QEDLLVILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMS-GDSRPGHSH 242
Q D ++I L + +N N A LA ++++ A +E I F + G S
Sbjct: 195 QEQLDSILINLISAHKNLNKQAFDLAKVLLKRTAQTIEPCIANFFNQVLVLGKSSVSDLS 254
Query: 243 IDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFH 302
++I +++ P +L V+P L +L ++ + RL V L+ LF S Q
Sbjct: 255 EHVFDLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLATQNR 314
Query: 303 SVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDENVRKQ 361
++ FL R D V VR+ ++ CL+ P A D + L R D +E +R
Sbjct: 315 PLWQCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKDLTEFLKV---RSHDPEEAIRHD 371
Query: 362 VVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSIN 421
V+ I A L + + + V ER DK V++ M LA +++ CL G
Sbjct: 372 VIVTIITAAKKDLFLVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLYKKYCLHGEGGKDA 431
Query: 422 QNEFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEM 480
+ WI K+L Y +E + L P ++R++ +++ D +
Sbjct: 432 AEKVSWIKDKLLHIYYQNSIDDKLLVEKIFAQQLVPHNLETEERMKCLYYLYASLDPNAV 491
Query: 481 KALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEEN 539
KAL ++ + + L+ ++ L L +Q + + + K++ ++++ +P KA++
Sbjct: 492 KALNEMWKCQNMLRSHVRELLDLHKQPTSEANTTAMFAKLM----TVAKNLPDPGKAQDF 547
Query: 540 FLILDQL--KDANVWKILMNLLDSNTSFDQA-FTGRDDLLKILGAKHRLYDFLSTLSM-- 594
+Q+ +D + L L+ + S QA RD K+ K FL +
Sbjct: 548 VKKFNQVLGEDEKLRSQLEVLISPSCSCKQADVCVRDIARKVANPKQPTNPFLEMVKFLL 607
Query: 595 -KCSYLLFNKEHVKEIL------LEVAA---QKSSANAQFMQSCMDILGILARFSPLLLG 644
+ + + + E + ++ +E A ++ + +++ +++L +L+ P
Sbjct: 608 ERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDSAIRAGLELLKVLSFTHPTSFH 667
Query: 645 G--TEEELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQ 702
T E L+ L+ E++ + E + + G I L S++ +L + G+ Q
Sbjct: 668 SDETYESLLQCLRMEDDKVAEAAIQIFRNTGHRIETDLPQIRSALIPILHQKAKRGTPHQ 727
Query: 703 AKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFET- 759
AK AVH + +I + ++ L+ +++ L L L L SLG I+ A F +
Sbjct: 728 AKQAVHCIHSIFSNKEVQ-LAQIFEPLSRSLNADVPEQLVTPLVSLGHISMLAPDQFASP 786
Query: 760 RESEIEEFIKSKILRC--SNKIRNDTKACWDDR-SELCLLKIYGIKTLVKSYLPVKDAHI 816
+S + FI +L SN +N C D+ S L K IK LV+ L +K+
Sbjct: 787 MKSVVANFIVKDLLMNDRSNGDKNGKLWCPDEEVSPEVLAKGQAIKLLVRWLLGMKNNQS 846
Query: 817 RPGIDDLLGILKSML-SYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDV 873
+ + L +L +ML S G+++E S D + LRLA+ A+++L+++ + I +
Sbjct: 847 KSA-NSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRLAAGAAIMKLAQEPCYHEIITPEQ 905
Query: 874 FHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLF----GITESKSPEFEENL 929
F L Q +++F K+H+ + L +Y F + E ++ + L
Sbjct: 906 FQLCALVINDECYQVRQIFAQKLHKALVKLQLPLEYMAIFALCAKDPVKERRAHARQCLL 965
Query: 930 ADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVY 989
+I +K + S+ + PEY++PY++H AH PD + +D+ +
Sbjct: 966 KNISIRREYIKQNPV---SNEKLLSLLPEYVVPYMIHLLAHD--PDFTKPQDIDQLRDIK 1020
Query: 990 CRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIV---DAAKSKNSHAICD 1046
L+F++ +L+ K+E+ S + + + +IK + D D ++ +CD
Sbjct: 1021 ECLWFMLEVLMTKNEN--------NSHAFMKKLCENIKQTRDAQAPDDPKANEKLFTVCD 1072
Query: 1047 LGLSIT 1052
+ L +
Sbjct: 1073 VALCVV 1078
>sp|Q9HFF5|PDS5_SCHPO Sister chromatid cohesion protein pds5 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pds5 PE=1 SV=1
Length = 1205
Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 262/1126 (23%), Positives = 482/1126 (42%), Gaps = 131/1126 (11%)
Query: 20 PSTKDGLVKLLKQAATCLSELNQSPPASILEAMQPFLNAIVQPVLLKHQDKDVKLLVATC 79
P T ++K L+ L+ L+Q +++ P ++V LL H+DK ++ C
Sbjct: 17 PLTTSEILKRLRDLLGELTSLSQDTIDR--DSVLPVARSLVNNNLLHHKDKGIRSYTLCC 74
Query: 80 ICEITRITAPEAPYSDDVLKDIFQLIVGTFSGLKDTGGPSFGRRVVILETLAKYRSCVVM 139
I E+ R+ AP+AP++ L+DIFQ+I+ SGL + + + ILE+L+ +S V++
Sbjct: 75 IVELLRLCAPDAPFTLSQLEDIFQVILKILSGLMNQESTYYPQIYEILESLSNVKSAVLI 134
Query: 140 LDL-ECDELVNEMYSTFFAVASDDHPESVLSSMQTIMIVLLEESEDIQEDLLVILLSAL- 197
+DL +E + ++ FF +A ++V M I+ L+ E I L IL + L
Sbjct: 135 VDLPNAEEFLVNIFRLFFDLARKGTTKNVEFYMLDIINQLINEINTIPAAALNILFAQLI 194
Query: 198 -GRNKNDT-----------ARRLAMNVIEQCAGKLEAGIKQFLVSSMSGDSRPGHS---- 241
G+ T A +LA N+ A +L+ + Q+ S + DSR S
Sbjct: 195 SGKGVRQTIGSSDSTNHGPAFQLARNIFHDSADRLQRYVCQYF-SDIIFDSRDSLSDSMT 253
Query: 242 ---HIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANN 298
I H ++ +++ +P L ++P EL +Q RL A+ VG + +A
Sbjct: 254 TPEFIFSHNLVLQLWKYAPTTLLNIIPQFENELQAEQTSVRLVAIETVG--LMLQDNAIW 311
Query: 299 EQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQ-ILTALCDRLLDFDEN 357
+ V+S F RL D+ VA R+ +E + L + ++ + ++ L +L D DE
Sbjct: 312 SDYPRVWSAFCGRLNDKSVACRIKCIEVASNALQNSLATSEIIENVVQMLQSKLADTDEK 371
Query: 358 VRKQVVAVICDVACHALN-SIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNF 416
VR + I + V+ +KL+ +RLRD+ + V+ + L+ I+ R +
Sbjct: 372 VRVATLKTIEQLTFETFKMQFSVQALKLMGDRLRDRKLNVRLQAIRTLSQIYN----RAY 427
Query: 417 NGSINQNE-----FEWIPGKILRCLYDKDFGSDTIESVLCGSLFPTGFS--VKDRVRHWV 469
I+ E F WIP +L Y D ++ + L S + R+
Sbjct: 428 QDLIDGVEYSIQMFSWIPSSLLEVFYVNDETTNAAVEICMAELVLQYLSSDTQTRLNRLF 487
Query: 470 RIFSGFDRIEMKALEKILEQKQRLQQEMQRYLSLRQMHQ----DGDAPEIQKKILFCFRV 525
F M+ +L+++ + + + Y+ + + D D I K+ +
Sbjct: 488 LSIKYFSEKAMRVFILLLQRQVKYSELLNYYIECCKNYNGGVMDNDEESITNKLKKVIDI 547
Query: 526 MSRSFAEPAKAEENFLILDQLKDANVWKILMNLLDSNTSFDQAFTGRDDLLKILGAKHRL 585
+S + P E F +L D +K+L+ + + L K R+
Sbjct: 548 ISSKSSNPTLTEATFRKFAELNDRQSYKMLLQTFSIKSEYQVVLKSIKYLFK------RV 601
Query: 586 YDFLSTLSMKC--------SYLLFNKEHVKEILLEVAAQKSSANAQFMQSCMDILGILAR 637
+ LST S++C + FNK +V EI+ + N F++ +L L
Sbjct: 602 SETLSTASLECFRIFVYRSALFAFNKSNVHEIIQLLNEPVKYHN--FLKPSEALLQHLPL 659
Query: 638 FSPLLLGGTEEELVNLLKEENEIIKEGILH----VLAKAGGTIREQLAATSSSVDLLLER 693
P + G +++ EN I+ GI + A + + R++ + ++ +L +
Sbjct: 660 IHPNIYGEV------VIEVENIIVSSGIESDPKVIKALSQFSKRKKNFSIQTTTAEILRK 713
Query: 694 LCLEGSRRQAKYAVHALAAI-TKDDGLKSLSVLYKRLVDMLEEKTHLPAVLQSLGCIAQT 752
LCL G++ QAK A +A TK+ L ++ +V+ LE LP L +LG +
Sbjct: 714 LCLHGTQEQAKQAATIIAITETKEFKLDMIT----NIVENLEYNGGLPVRLMTLGQLFLY 769
Query: 753 AMPVFETRESEIEEFIKSKIL-RCSNKI---RNDTKAC-WDDRSELCLLKIYGIKTLVKS 807
+ E ++ EF+ K++ R K ND + C ++ L + K+ I+ LV
Sbjct: 770 TLEEVEKVADQVTEFLVKKVIQRFPEKYDDTHNDEEWCTYEKLDNLTMCKVLAIRVLVNR 829
Query: 808 YLPVKDA----HIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLSR 863
+I I LL +L +++ GE+S + + +A+LRL ++K L+L
Sbjct: 830 LRAAAGGTEALNIGAPIIKLLKVL--LMADGELSPFKNTPKISRAYLRLTASKYFLKLC- 886
Query: 864 QWDHKIPVDVFHLTLRT-PEISFP------QAKKLFLSKVHQYVKDRLLD-AKYACAFLF 915
IP H+ + +IS + LFL+K+ + ++ + L + Y FL
Sbjct: 887 ----SIPFYAEHIDFSSYVQISLLCQDENFDVRNLFLTKLQKQLQLKKLPISYYPLLFLT 942
Query: 916 GITESKSPEFEENLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPD 975
+ PE E I + Q+ Q + F EY+ YL+H +HH PD
Sbjct: 943 AV----DPEEEIKTKASIWIRSQVAFFQ-----KTHDFTM--EYVATYLIHLLSHH--PD 989
Query: 976 IDECKDVKAFELV-YCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIVD 1034
I + + + + Y R Y N E++ ++ + + IK S D+++
Sbjct: 990 ISSIESENSLDFIAYIRFYV-------------DTVVNSENVPIVFHLMQRIKQSYDVIE 1036
Query: 1035 AAKSKNSHAICDLGLSITKRLSRMEDNSQGVFSSVSLPSTLYKPYE 1080
+ + + D+ +++ +++ + G +S + P + PYE
Sbjct: 1037 DGNNY-IYVLSDMA----QKILQVKSQNFG-WSLTTYPKQIKLPYE 1076
>sp|Q04264|PDS5_YEAST Sister chromatid cohesion protein PDS5 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PDS5 PE=1 SV=1
Length = 1277
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 210/1019 (20%), Positives = 419/1019 (41%), Gaps = 126/1019 (12%)
Query: 49 LEAMQPFLNAIVQPVLLKHQDKDVKLLVATCICEITRITAPEAPYSDDVLKDIFQLIVGT 108
L + + +A+V LLKH+D ++ A C+ +I R+ AP+APY+D L DIF+L++
Sbjct: 49 LTGLDKYRDALVSRKLLKHKDVGIRAFTACCLSDILRLYAPDAPYTDAQLTDIFKLVLSQ 108
Query: 109 FSGLKDTGGPSFGRRVVILETLAKYRSCVVMLDL-ECDELVNEMYSTFFAVASDDHPESV 167
F L D ++ ++ L +YRS V++ DL + L+ E++ F+ + P +
Sbjct: 109 FEQLGDQENGYHIQQTYLITKLLEYRSIVLLADLPSSNNLLIELFHIFYD-PNKSFPARL 167
Query: 168 LSSMQTIMIVLLEESEDIQEDLLVILLSA-LGRNKNDTARRLAMNVIEQCAGKLEAGIKQ 226
+ + I+ ++ E + + ++L ++ + L N N+ +NV C ++ +
Sbjct: 168 FNVIGGILGEVISEFDSVPLEVLRLIFNKFLTYNPNEIPE--GLNVTSDCGYEVSLILCD 225
Query: 227 FLVSSMS------------------GDSRPGHSHIDYHEVIYDVYRCSPQILSGVVPYLT 268
+ MS +SR + H+++ ++ P++++ V+ ++
Sbjct: 226 TYSNRMSRHLTKYYSEIIHEATNDDNNSRLLTVVVKLHKLVLRLWETVPELINAVIGFIY 285
Query: 269 GELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHS-VFSEFLKRLTDRIVAVRMSVLEHV 327
EL ++ R +A L+G + N HS F ++ ++ D VR+ E +
Sbjct: 286 HELSSENELFRKEATKLIGQILTSYSDLNFVSTHSDTFKAWISKIADISPDVRVEWTESI 345
Query: 328 KSCLLTDPSRADAPQILT-ALCDRLLDFDENVRKQVVAVICDVACHALNSIPV-ETVKLV 385
+ T R D + L AL +D D VR+ V + N +PV E K +
Sbjct: 346 PQIIAT---REDISKELNQALAKTFIDSDPRVRRTSVMI--------FNKVPVTEIWKNI 394
Query: 386 AERLRDKSVL-VKRYTMERLADIFRGCCLRNFNGSIN------QNEFEW-----IPGKIL 433
+ S+L + R + + ++ + ++ S+N QN+ W IP +
Sbjct: 395 TNKAIYTSLLHLAREKHKEVRELCINTMAKFYSNSLNEIERTYQNKEIWEIIDTIPSTLY 454
Query: 434 RCLYDKDFG-SDTIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEMKALEKILEQKQR 492
Y D ++ ++SV+ L P RV + + S FD+ + ++ +
Sbjct: 455 NLYYINDLNINEQVDSVIFEYLLPFEPDNDKRVHRLLTVLSHFDKKAFTSFFAFNARQIK 514
Query: 493 LQQEMQRYLSLRQMHQDGDA------PEIQKKILFCFRVMSRSFAEPAKAEENFLILDQL 546
+ + +Y+ + + ++ P + K + ++ ++ KA + + Q
Sbjct: 515 ISFAISKYIDFSKFLNNQESMSSSQGPIVMNKYNQTLQWLASGLSDSTKAIDALETIKQF 574
Query: 547 KDANVWKILMNLLDSNTSFDQAFTGRDDLLKIL-------------GAKHRLYDF---LS 590
D ++ +L + ++ F ++L+ L GA D +
Sbjct: 575 NDERIFYLLNACVTNDIPFLTFKNCYNELVSKLQTPGLFKKYNISTGASIMPRDIAKVIQ 634
Query: 591 TLSMKCSYLLFNKEHVKEILLEVAAQKSSANAQFMQSCMDILGILARFSPLLLGGTEEEL 650
L + S +++N ++ +LL ++ ++++A+ + IL +++ +P L L
Sbjct: 635 ILLFRASPIIYNVSNI-SVLLNLS---NNSDAKQLDLKRRILDDISKVNPTLFKDQIRTL 690
Query: 651 VNLLK-------EENEIIK-EGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQ 702
++K E+N+ + E L L KA T+++Q+ + L +E
Sbjct: 691 KTIIKDLDDPDAEKNDNLSLEEALKTLYKASKTLKDQVDFDDTFFFTKLYDFAVESKPEI 750
Query: 703 AKYAVHALAAITK-DDGLKSLSVLYKRLVDM-LEEKTHLPAVLQSLGCIAQTAMPVFETR 760
KYA +A K ++ LK + + R++ + L++ + + + L I + V
Sbjct: 751 TKYATKLIALSPKAEETLKKIKI---RILPLDLQKDKYFTSHIIVLMEIFKKFPHVLNDD 807
Query: 761 ESEIEEFIKSKILRCSNKIRNDTK--ACWDDRSELCLLKIYGI--KTLVKSYLPVKDAHI 816
++I ++ ++L SN++ D+K W + S L K I K K I
Sbjct: 808 STDIISYLIKEVL-LSNQVVGDSKKEIDWVEDSLLSDTKYSAIGNKVFTLKLFTNKLRSI 866
Query: 817 RPGI--DDLLG---------ILKSMLSYGEM-----SEDIESSSVDKAHLRLASAKAVLR 860
P + D+L + S GE+ E + S + LR + VL+
Sbjct: 867 APDVPRDELAESFTEKTMKLFFYLIASGGELISEFNKEFYPTPSNYQTKLRCVAGIQVLK 926
Query: 861 LSR--QWDHKI-PVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGI 917
L+R ++ I P D+ L + S P +K FL ++ YV + L+ K+ F
Sbjct: 927 LARISNLNNFIKPSDIIKLINLVEDESLP-VRKTFLEQLKDYVANELISIKFLPLVFFTA 985
Query: 918 TESKSPEFEENLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDI 976
E P+ E I ++ + T E +P L+H AHH PDI
Sbjct: 986 YE---PDVELKTTTKIWINFTFGLKSFKK-------GTIFERALPRLIHAIAHH--PDI 1032
>sp|Q552Q7|PDS5_DICDI Sister chromatid cohesion protein PDS5 homolog OS=Dictyostelium
discoideum GN=pds5 PE=3 SV=1
Length = 1450
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 234/1138 (20%), Positives = 457/1138 (40%), Gaps = 183/1138 (16%)
Query: 50 EAMQPFLNAIVQPVLLKHQDKDVKLLVATCICEITRITAPEAPYSDDVLKDIFQLIVGTF 109
E ++ L ++ P ++ +++L+ + C+ EI RI AP P+ VLK +F+L
Sbjct: 194 EGLEIVLEVLIDPKFADNKIFEIRLMTSCCLSEIFRIYAPTLPFDMVVLKVVFKLFTEQV 253
Query: 110 SGLKDTGGPSFGRRVVILETLA--KYRSCVVMLDLECDELVNEMYSTFFA-----VASDD 162
F + +LE L+ K + + ++D + M + FF V D
Sbjct: 254 LQGDKVDKKLFPQYFQMLERLSVIKVFALLALVD-------SSMLTPFFKDCLSRVHGDK 306
Query: 163 HPESVLSSMQTIMIVLLEESEDIQEDLLVILL-SALGRNKNDTARRLAM---NVIEQCAG 218
+ + T++ +LE E++ L LL S + R K A+ ++IE +
Sbjct: 307 EHQPMDIMFSTLLNTILESLEEVPTSLWNELLESLIEREKGGVPTSKAIFTHDLIETNSR 366
Query: 219 KLEAGIKQFLV------------------SSMSGDSRPGHSHIDYHEVIYDVYRCSPQIL 260
L+ FL SS+S + +E++++++ P+ +
Sbjct: 367 FLQVHFDLFLQDLLEPEILAGGQQQQQQDSSLSNNGISKQLKKKKNEILFEMFNILPEFI 426
Query: 261 SGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANN--EQFHSVFSEFLKRLTDRIVA 318
+ L +L R A ++ ++ +++ Q ++++ FL R D +
Sbjct: 427 YPALQNLEFDLEDVNASIRKGAAIVLSRCYSTESASDELIAQRPTLYTTFLNRFHDVDIK 486
Query: 319 VRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVRKQVVAVICDVACHALNSIP 378
+R ++E S T S + ++L ++ DR D + ++R + + + +
Sbjct: 487 IRTVMMEF--SEHFTTTSDLEMERVLKSVRDRFRDSEPDIRIKAIQIFQKYIIKNPELMN 544
Query: 379 VETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSINQ------NEFEWIPGKI 432
E + ER+RDK V++ L+ ++R +R G I+ + F IP +
Sbjct: 545 PELMSEYLERVRDKDSKVRKDAEISLSTVWRS--VREKYGPIDDWSNTLIDCFSTIPNTL 602
Query: 433 LRC--LYDKDFGSDTIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEMKALEKILEQK 490
+ C LYD D IE L P VK+R + ++ I+ D + +K LE+K
Sbjct: 603 IHCLGLYDDD--KYRIEIAFDSILLPQHSDVKNRSQVFLEIYKYLDESNKQLFKKYLEEK 660
Query: 491 QRLQQEMQRYLSLRQMHQD-----GDAPEIQKK--------------------------- 518
+ L+QE +L+L Q ++ G KK
Sbjct: 661 KSLRQE---FLALIQFLKNPKVVGGSTTPTSKKSQPPQQQQQQQQQQQQQLQQPENDIEV 717
Query: 519 -ILFCFRVMSRSFAEPAKAEENFLILDQLKDANVWKILMNLLDSNTSFDQAFTGRDDLLK 577
I ++ + E +K LI + + +L+ + D NT+F + + + ++
Sbjct: 718 YITHVDNLLPKFIGESSKKLVRQLITPS--NKKILDLLVLISDINTTFQEQYNIKISIIS 775
Query: 578 ILGAKHRLYDFLSTLSMKCSYLLFNKEHVKEILLEVAAQKSSAN----------AQF--- 624
+ +F+ + K +Y + KE++K +L + + N +F
Sbjct: 776 KAQNESSFSEFIKYMVNKLAYSIVGKENIKYLLRGLRSDLGLDNFDKNNPIDLLEEFNEK 835
Query: 625 ---------MQSCMDILGILARFSPLLLGGTEEELVNLLKEENEIIKEGILHVLAKAGGT 675
+ +++L +L++ + ++LV L I+ +L +L+ + T
Sbjct: 836 IYEKEVKDGVPETLEVLLMLSQVYANIFDDYGDQLVGFLTCSKSIVY-PVLQILSNSWKT 894
Query: 676 IREQLAATSSSVDLLLE-------RLCLEGSRRQAKYAVHALAAITKDDG-------LKS 721
++ S++D+LL L + K+A AL +I +G + +
Sbjct: 895 LKLSKKTLKSTLDMLLRLTQVPQPTLARLAFKTFIKFATPALTSINSTNGKVDNNKLVVT 954
Query: 722 LSVLYKRLVDMLEEKT-HLPAVLQSLGCIAQTAMPVFETRESEIEEFIKSKILRCSNKIR 780
L L L D LE+K+ +L ++L+ +GC+A+ V ++ + KI+ +
Sbjct: 955 LKDLANNLFDQLEDKSKNLLSILEVIGCLAKGYSLVLSEHLDTLDILLIKKIMTGVCTLD 1014
Query: 781 NDTKACWDDRSELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLLGI---------LKSML 831
+ K + E L Y L+K A I+ + LLG+ + +ML
Sbjct: 1015 FNQKVQLNKSVEHHLNTSYSKDVLIKI------AAIKCMSNYLLGLREITKKSHEMVNML 1068
Query: 832 --SYGEMSEDIESSSVDKAHLRLASAKAVLRLSR--QWDHKIPVDVFHLTLRTPEISF-- 885
Y + ++ + ++K+HL++ A +LR+ + Q++ +I F L + I+
Sbjct: 1069 FEFYIGLDKNKTYNDLEKSHLKIHIAIGLLRVFQRSQYEKEITPQQFILICNSTSITTKQ 1128
Query: 886 ---PQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEENLADIIQMHHQ--MK 940
P ++L + +R L KY AF + S + +++ H +K
Sbjct: 1129 RGDPLIRRLIEKLAKVMILNR-LPMKYMAAFGMAAQQPYS------VLALVRKHSTSIIK 1181
Query: 941 ARQISVQSDANSFAT-------YPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYCRLY 993
R++ + A S + YPE +PY ++ +H D +D + C L
Sbjct: 1182 TRRMVISRLAASLSMAKNLTEFYPESSMPYFLYVVSHRE----DFERDAPDYIESACYLN 1237
Query: 994 FIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIVDAAKSKNSHAICDLGLSI 1051
F + +L+ EA N S+I +IF +K S D +D KSKN +LGL I
Sbjct: 1238 FFIDLLVE-------EADN---YSIIHTIFTKLKRSTDALD-KKSKNHIIAAELGLQI 1284
>sp|O04716|MSH6_ARATH DNA mismatch repair protein MSH6 OS=Arabidopsis thaliana GN=MSH6 PE=1
SV=2
Length = 1324
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 41/55 (74%)
Query: 1374 EDLIGYRIKVWWPMDKQFYEGTIKSYDPIKKKHVILYDDEDVEVLRLDKERWELL 1428
++++G +++V+WP+DK++Y+G++ YD + KHV+ Y+D + E L L KE+ E +
Sbjct: 122 DEVVGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDLGKEKTEWV 176
>sp|Q9ZUM0|C3H17_ARATH Zinc finger CCCH domain-containing protein 17 OS=Arabidopsis thaliana
GN=At2g02160 PE=1 SV=1
Length = 669
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 1448 LIQVSSGKKNKLSGGARQNKKSMKDKGKRTPKKSL---KDRPKFASKSYFSEDEDSEK-T 1503
L + SG + + G ++ M+D+ K PK S K P + F ED S K +
Sbjct: 460 LEENHSGNQERGFGAPWARRREMEDERKSAPKSSREESKPEPSLGKRKSFEEDHHSHKRS 519
Query: 1504 DVSDPKPTTVSKVLE-TNSGDSQGKRADMEDENLTDKEESDKEFKLISEER 1553
S P S++L+ + S G R + +DE ++ KEE+ E KLI+EE+
Sbjct: 520 RDSFAAPLPFSEILKRKKAAASGGSRNNNKDETIS-KEEAGDEIKLITEEK 569
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 614,877,054
Number of Sequences: 539616
Number of extensions: 27168569
Number of successful extensions: 146438
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 2622
Number of HSP's that attempted gapping in prelim test: 93585
Number of HSP's gapped (non-prelim): 23610
length of query: 1675
length of database: 191,569,459
effective HSP length: 131
effective length of query: 1544
effective length of database: 120,879,763
effective search space: 186638354072
effective search space used: 186638354072
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 68 (30.8 bits)