Query 000320
Match_columns 1673
No_of_seqs 282 out of 306
Neff 4.4
Searched_HMMs 29240
Date Tue Mar 26 17:15:30 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000320.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_98-102//hhsearch_pdb/000320hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3biy_A Histone acetyltransfera 1.0 1 1 937.0 25.5 358 1149-1591 1-380 (380)
2 1l3e_B P300 protein; protein-p 1.0 1 1 180.8 -0.5 88 694-782 6-100 (101)
3 3t92_A Histone acetyltransfera 1.0 1 1 126.7 4.9 89 697-787 5-97 (121)
4 1tot_A CREB-binding protein; z 1.0 1 1 91.1 0.8 51 1588-1643 2-52 (52)
5 1l3e_B P300 protein; protein-p 1.0 1 1 88.3 1.6 73 731-803 17-100 (101)
6 3p57_P Histone acetyltransfera 1.0 1 1 83.0 7.2 87 697-785 4-94 (112)
7 2dip_A Zinc finger SWIM domain 1.0 1 1 76.8 2.6 50 1590-1641 29-78 (98)
8 2e5r_A Dystrobrevin alpha; ZZ 1.0 1 1 76.1 2.6 47 1592-1639 11-61 (63)
9 3t92_A Histone acetyltransfera 1.0 1 1 75.6 1.1 66 734-799 17-88 (121)
10 2fc7_A ZZZ3 protein; structure 1.0 1 1 73.6 2.8 52 1590-1641 19-76 (82)
No 1
>3biy_A Histone acetyltransferase P300; P300 HAT, bisubstrate inhibitor, protein-inhibitor complex; HET: 01K; 1.70A {Homo sapiens}
Probab=1.00 E-value=1 Score=936.96 Aligned_cols=358 Identities=42% Similarity=0.748 Sum_probs=308.6
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHC-CCCCCC
Q ss_conf 2466779987014999999999999999999988278777889975479999951310356658899864205-999833
Q 000320 1149 VLGAKDLPRTILSDHIEHRLFRRLKQERQERARIQGKSYDEVPGAEALVIRVVSSVDKKLEVKQRFLEIFQEE-NYPTEF 1227 (1673)
Q Consensus 1149 ~~~AkdLP~T~LS~fiE~rLn~~L~~e~~~~a~~~G~~~~ev~~a~~l~VRvVss~dK~~~Vk~~f~~~f~e~-~yp~ef 1227 (1673)
+|+|+|||+|+||+|||+|||++|+++ +.++++.|+||||++++|+++|+++|.++|.+. +||++|
T Consensus 1 ~f~a~~Lp~t~LS~~lE~rln~~L~~~-------------~~~~~~~v~IRvvss~~k~~ev~~~~~~~f~~~~~~~~~f 67 (380)
T 3biy_A 1 KFSAKRLPSTRLGTFLENRVNDFLRRQ-------------NHPESGEVTVRVVHASDKTVEVKPGMKARFVDSGEMAESF 67 (380)
T ss_dssp CCCSTTSCCCHHHHHHHHHHHHHHHHH-------------TCTTCCCEEEEEEEEEEEEEECCTTHHHHTTTTTSSCSEE
T ss_pred CCCHHHCCCCHHHHHHHHHHHHHHHHH-------------CCCCCCCEEEEEEEEECCEEECCHHHHHHHCCCCCCCCCC
T ss_conf 988033888737899999999999862-------------5565575579999742230121611787613213577345
Q ss_pred CCEEEEEEEEEEECCEEEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 64047999999858878999999976327889999974299982355444444311123310356999999999999998
Q 000320 1228 PYKSKVVLLFQKIEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEIKAVTGEALRTFVYHEILIGYLEYCK 1307 (1673)
Q Consensus 1228 pYrsKaI~vFQkiDGVDVlfF~MyVQEYgs~c~~PN~r~vyIsYLDSV~Yf~P~~~~~~Ge~lRT~VYheILl~Yl~Yak 1307 (1673)
|||+|||+|||+|||||||||+|||||||++||.||+|||||+|||||+||+|+ .+||+||||||||||+|||
T Consensus 68 ~YrsK~I~vFQ~idgvDV~fF~m~vqEy~~~c~~pn~r~vyI~YLDSV~yf~p~-------~~Rt~vY~eill~Yl~y~k 140 (380)
T 3biy_A 68 PYRTKALFAFEEIDGVDLCFFGMHVQEYGSDCPPPNQRRVYISYLDSVHFFRPK-------CLRTAVYHEILIGYLEYVK 140 (380)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEECTTSCTTSTTEEEEEEEEECSCCSSG-------GGHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEEEEECCEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCC-------HHHHHHHHHHHHHHHHHHH
T ss_conf 513679999997589379999999471155678988726999871442235730-------2678999999999999998
Q ss_pred HCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 60985789971799999971460699999999925799999999999985290964000254430154543344676646
Q 000320 1308 LRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLAMLRKAAKENIVVDLTNLYDHFFVSTGECRAKVTAARL 1387 (1673)
Q Consensus 1308 ~~GF~~ahIWAcPP~~GDDYIF~~HP~~Qk~p~~~rL~~WY~~mL~kak~eGIV~~~~nlyd~~f~~~~e~~~~~~a~~L 1387 (1673)
++||++||||||||.+||||||||||++|++|++++|++||++||++|+++|||.+|+|||++.+.. .+.+|++|
T Consensus 141 ~~Gf~~~hiWAcPP~~GDDYIF~~HP~~Qk~p~~~rL~~WY~~mL~kg~~~giv~~~~~~~~~~~~~-----~~~~~~~l 215 (380)
T 3biy_A 141 KLGYTTGHIWACPPSEGDDYIFHCHPPDQKIPKPKRLQEWYKKMLDKAVSERIVHDYKDIFKQATED-----RLTSAKEL 215 (380)
T ss_dssp HHTCCEEEEECCCCCTTCCSSSSSCCTTCCCCCHHHHHHHHHHHHHHHHHTTSCCEEEEHHHHHHHH-----TCCCGGGS
T ss_pred HCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHCCC-----CCCCHHHC
T ss_conf 3797368887069989984588407410678880799999999999898759354056686531455-----55887558
Q ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCCCCC-----------CCC---CHHHHHHHHHHCCC-------CCCCCCCCHHHH
Q ss_conf 854599961799999999982000011134-----------664---02343897774299-------888888641079
Q 000320 1388 PYFDGDYWPGAAEDLIYQIRQDEDGKKQNK-----------GIT---KKTITKRALKASGQ-------TDLSGNASKDLL 1446 (1673)
Q Consensus 1388 PYFeGd~Wp~~~E~ii~~l~~e~~~~k~~k-----------~~~---kk~~~kr~~k~~g~-------~~~~~~~~kd~~ 1446 (1673)
|||||||||+++|++|++|++|+++||..+ |.. ||...|++.++.+. .....+.+. .
T Consensus 216 PyF~gd~W~~~~e~~i~el~~e~~~rk~~~~~~~~~~~~~~~~~k~~kkk~~kk~~~~k~~~~~~~~k~~~~~~~~~--~ 293 (380)
T 3biy_A 216 PYFEGDFWPNVLEESIKELEQEEEERKREENTSNESTDVTKGDSKNAKKKNNKKTSKNKSSLSRGNKKKPGMPNVSN--D 293 (380)
T ss_dssp CCCTTCHHHHHHHHHHCC--------------------------------------------------------------
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCH--H
T ss_conf 84178756799999999998877764310012222244545404665530144443343202232001468876424--8
Q ss_pred HHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 99985200046864206764244575464310037504641222244220001355898620122257888864442233
Q 000320 1447 LMHKLGETICPMKEDFIMVHLQHACNHCCILMVSGSRHVCEQCTKLNKNFQLCDKCFEAEKKREDRERHPVNSREVHILE 1526 (1673)
Q Consensus 1447 lm~klg~~i~~~KEdF~vv~Lq~~C~~C~~~iV~g~Rw~C~~C~~~~k~f~LCe~Cy~~e~~~~~~~~HP~~~~~~h~L~ 1526 (1673)
||+||+++|++||||||||+|+... . .+.|
T Consensus 294 l~~kl~~~~~~~ke~ff~i~L~~~~---------------------------------------------~----~~~l- 323 (380)
T 3biy_A 294 LSQKLYATMEKHKEVFFVIRLIAGP---------------------------------------------A----ANSL- 323 (380)
T ss_dssp -CHHHHHHHHHTGGGEEEEESSCGG---------------------------------------------G----GTSC-
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCC---------------------------------------------C----CCCC-
T ss_conf 9999999987304533999954776---------------------------------------------5----5678-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHCCCCCCCC
Q ss_conf 45557999998776511235222106999986430799843001023540245655029998754
Q 000320 1527 EVPVTDVPADTKDKDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAF 1591 (1673)
Q Consensus 1527 pv~v~dvP~~t~D~D~~leseffDtRqaFLslCQ~nHyQFDsLRRAKhSSMMvLyHLHNp~~~~f 1591 (1673)
| .+.|+|++|+|+|||+|++||++||+|||||||||||||||||||||||||++|+|
T Consensus 324 -------p-~~~D~D~~~~~e~~d~R~~FL~~c~~~h~qF~tLRRAK~SSm~~L~~Lhn~~~~~~ 380 (380)
T 3biy_A 324 -------P-PIVDPDPLIPCDLMDGRDAFLTLARDRHLEFSSLRRAQWSTGCMLVELHTQSQDRF 380 (380)
T ss_dssp -------C-CCCCCSCCBCCGGGSSSHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHCCC-
T ss_pred -------C-CCCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf -------9-98998754204200689999999998387757156777769999999648888989
No 2
>1l3e_B P300 protein; protein-protein complex, transcription; NMR {Homo sapiens} SCOP: g.53.1.1 PDB: 1p4q_B 1r8u_B 2ka4_A 1l8c_A 1u2n_A 1liq_A
Probab=1.00 E-value=1 Score=180.78 Aligned_cols=88 Identities=33% Similarity=0.721 Sum_probs=80.3
Q ss_pred CCCCHHHHHHHHHCHHHHHHHCCCCCCCC------CCCCCCCCHHHHHHHHCCCCCCC-CCCCCCCCCCHHHHHHHHHCC
Q ss_conf 35762467755100223432115258998------88778880669999840012699-999998741038899986136
Q 000320 694 TNGNRDRQFRNQQRWLLFLRHARRCAAPE------GKCQDVNCITVQKLWRHMDNCTS-SQCPYPRCHHSKILIHHHKHC 766 (1673)
Q Consensus 694 ~~~~~e~~~~~qqrwLllL~HA~kC~~~~------g~C~~~~C~~~K~lL~Hm~~C~~-~~C~~~~C~sSr~Ll~H~k~C 766 (1673)
...|+++..++|++ |+||+||++|..++ +.|.+++|.+||+||.||.+|++ ++|+|+||.+||+||+||++|
T Consensus 6 ~~~dp~~~k~iqqq-L~lL~HA~kC~~~e~~~g~~~~C~lp~C~~mK~ll~Hm~~C~~g~~C~~~~C~sSr~ii~H~k~C 84 (101)
T 1l3e_B 6 HTADPEKRKLIQQQ-LVLLLHAHKCQRREQANGEVRQCNLPHCRTMKNVLNHMTHCQSGKSCQVAHCASSRQIISHWKNC 84 (101)
T ss_dssp CCCCGGGHHHHHHH-HHHHHHHHHHHHHHTTTSSCCCCSCHHHHHHHHHHHHHTTCCSCSSSSCHHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHH-HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 88997999999999-99999998848820268868888997638999999999876388999999888799999999868
Q ss_pred CCCCCCCCHHHHHHHH
Q ss_conf 9999997167788889
Q 000320 767 RDPSCPVCVPVKNYLQ 782 (1673)
Q Consensus 767 ~~~~CpvC~pvR~~i~ 782 (1673)
++.+||||.|||++.+
T Consensus 85 ~~~~CpVC~pvk~~~~ 100 (101)
T 1l3e_B 85 TRHDCPVCLPLKNAGD 100 (101)
T ss_dssp CSSCCTTHHHHHCCSC
T ss_pred CCCCCCCCHHHHHHHH
T ss_conf 9999986788996430
No 3
>3t92_A Histone acetyltransferase P300 TAZ2-ccaat/enhance protein epsilon; TAZ2 domain, zinc finger, transcription, 300/CBP, C/EBP PROT transferase; HET: TCE TAM; 1.50A {Homo sapiens} PDB: 2k8f_A 2ka6_A 2kje_A 1f81_A
Probab=1.00 E-value=1 Score=126.75 Aligned_cols=89 Identities=29% Similarity=0.582 Sum_probs=80.2
Q ss_pred CHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC-CCCCCCCCCCHHHHH-HHHHCCCCCCCCC-
Q ss_conf 6246775510022343211525899888778880669999840012699-999998741038899-9861369999997-
Q 000320 697 NRDRQFRNQQRWLLFLRHARRCAAPEGKCQDVNCITVQKLWRHMDNCTS-SQCPYPRCHHSKILI-HHHKHCRDPSCPV- 773 (1673)
Q Consensus 697 ~~e~~~~~qqrwLllL~HA~kC~~~~g~C~~~~C~~~K~lL~Hm~~C~~-~~C~~~~C~sSr~Ll-~H~k~C~~~~Cpv- 773 (1673)
..|.+....++||.+|+||.+|..+ .|..|+|..||.||.|+..|+. +.|.+++|..++.|| .||+.|.+.+|||
T Consensus 5 ~~e~R~~~iq~~l~~L~HA~~C~~~--~C~~p~C~~mK~ll~H~~~C~~r~~~~c~~C~~~~~Ll~~Hak~C~~~~C~VP 82 (121)
T 3t92_A 5 PGDSRRLSIQRAIQSLVHAAQCRNA--NCSLPSCQKMKRVVQHTKGCKRKTNGGCPICKQLIALAAYHAKHCQENKCPVP 82 (121)
T ss_dssp --CHHHHHHHHHHHHHHHHHHCCCT--TCCCHHHHHHHHHHHHHHHCSSTTTTTCHHHHHHHHHHHHHHTTCCCTTCCST
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCC--CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 6999999999999999977409378--99970438999999999980689999997449999999999976799999998
Q ss_pred -CHHHHHHHHHHHHH
Q ss_conf -16778888998782
Q 000320 774 -CVPVKNYLQQQKER 787 (1673)
Q Consensus 774 -C~pvR~~i~~~~~~ 787 (1673)
|.++|+.+++.+..
T Consensus 83 ~C~~iK~~~~~qq~q 97 (121)
T 3t92_A 83 FCLNIKQKLRQQQLE 97 (121)
T ss_dssp THHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
T ss_conf 658899999999999
No 4
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=1.00 E-value=1 Score=91.14 Aligned_cols=51 Identities=39% Similarity=0.914 Sum_probs=44.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCH
Q ss_conf 87543215334467657994012789997442132203899998987656999201
Q 000320 1588 APAFVTTCNICHLDIETGQGWRCEVCPDYDVCNACYQKDGGIDHPHKLTNHPSTAD 1643 (1673)
Q Consensus 1588 ~~~f~~tCn~C~~~I~tG~rwhC~vCpDfDLC~~Cy~k~g~~~H~HkL~~~~s~~~ 1643 (1673)
.++|.++|+.|..+| |.||||.+|+|||||.+||.+. .|+|+|.+++.+.|
T Consensus 2 ~~~~~~~Cd~C~~~i--g~R~~C~~C~dyDLC~~C~~~~---~H~H~m~~~~~~l~ 52 (52)
T 1tot_A 2 QDRFVYTCNECKHHV--ETRWHCTVCEDYDLCINCYNTK---SHTHKMVKWGLGLD 52 (52)
T ss_dssp BCSSCEEETTTTEEE--SSEEEESSSSSCEECHHHHHHH---CCCSSEEEECSSCC
T ss_pred CCCCEEECCCCCCCC--CCEEECCCCCCCHHHHHHHHCC---CCCCCEEEECCCCC
T ss_conf 983788998988988--4547848999853499998379---98886488368889
No 5
>1l3e_B P300 protein; protein-protein complex, transcription; NMR {Homo sapiens} SCOP: g.53.1.1 PDB: 1p4q_B 1r8u_B 2ka4_A 1l8c_A 1u2n_A 1liq_A
Probab=1.00 E-value=1 Score=88.32 Aligned_cols=73 Identities=27% Similarity=0.594 Sum_probs=66.0
Q ss_pred HHHHHHHHCCCCCCC--------CCCCCCCCCCHHHHHHHHHCCCC-CCCCC--CHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 669999840012699--------99999874103889998613699-99997--16778888998782089999987765
Q 000320 731 ITVQKLWRHMDNCTS--------SQCPYPRCHHSKILIHHHKHCRD-PSCPV--CVPVKNYLQQQKERARPKTDSCLPSS 799 (1673)
Q Consensus 731 ~~~K~lL~Hm~~C~~--------~~C~~~~C~sSr~Ll~H~k~C~~-~~Cpv--C~pvR~~i~~~~~~s~~~~~vc~p~~ 799 (1673)
..--.||.|+.+|+. +.|.+|+|...|.||.|+..|++ ..|+| |..+|.+|.||++|.+..||||.|++
T Consensus 17 qqqL~lL~HA~kC~~~e~~~g~~~~C~lp~C~~mK~ll~Hm~~C~~g~~C~~~~C~sSr~ii~H~k~C~~~~CpVC~pvk 96 (101)
T 1l3e_B 17 QQQLVLLLHAHKCQRREQANGEVRQCNLPHCRTMKNVLNHMTHCQSGKSCQVAHCASSRQIISHWKNCTRHDCPVCLPLK 96 (101)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSSCCCCSCHHHHHHHHHHHHHTTCCSCSSSSCHHHHHHHHHHHHHHHCCSSCCTTHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHH
T ss_conf 99999999998848820268868888997638999999999876388999999888799999999868999998678899
Q ss_pred CCCC
Q ss_conf 5567
Q 000320 800 VSES 803 (1673)
Q Consensus 800 v~~~ 803 (1673)
....
T Consensus 97 ~~~~ 100 (101)
T 1l3e_B 97 NAGD 100 (101)
T ss_dssp CCSC
T ss_pred HHHH
T ss_conf 6430
No 6
>3p57_P Histone acetyltransferase P300; protein-DNA complex, transcription factor, transcriptional activation, zinc finger; HET: DNA; 2.19A {Homo sapiens} PDB: 3io2_A
Probab=1.00 E-value=1 Score=82.99 Aligned_cols=87 Identities=30% Similarity=0.608 Sum_probs=76.8
Q ss_pred CHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC-CCCCCCCCCCHHHH-HHHHHCCCCCCCCC-
Q ss_conf 6246775510022343211525899888778880669999840012699-99999874103889-99861369999997-
Q 000320 697 NRDRQFRNQQRWLLFLRHARRCAAPEGKCQDVNCITVQKLWRHMDNCTS-SQCPYPRCHHSKIL-IHHHKHCRDPSCPV- 773 (1673)
Q Consensus 697 ~~e~~~~~qqrwLllL~HA~kC~~~~g~C~~~~C~~~K~lL~Hm~~C~~-~~C~~~~C~sSr~L-l~H~k~C~~~~Cpv- 773 (1673)
..|......+++|.+|.||..|.. ..|..+.|..||.|+.|+..|.. .....++|...-.| ..|++.|.+.+|+|
T Consensus 4 ~~~~r~~~iq~~l~~L~HA~~C~~--~~C~~~~C~~mK~ll~H~~~C~~r~~~gC~~Ck~~~~Ll~~HAk~C~~~~C~VP 81 (112)
T 3p57_P 4 PGDSRRLSIQRCIQSLVHACQCRN--ANCSLPSCQKMKRVVQHTKGCKRKTNGGCPICKQLIALCCYHAKHCQENKCPVP 81 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCC--TTCCCTTHHHHHHHHTCTTCC-------CCCHHHHHHHHHHHHTTCCSTTCCST
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCC--CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 677899999999999998841989--999970559999999999885687999982009999999999987398999998
Q ss_pred -CHHHHHHHHHHH
Q ss_conf -167788889987
Q 000320 774 -CVPVKNYLQQQK 785 (1673)
Q Consensus 774 -C~pvR~~i~~~~ 785 (1673)
|..+|+.+++.+
T Consensus 82 ~C~~iK~~~~q~q 94 (112)
T 3p57_P 82 FCLNIKQKLRQQQ 94 (112)
T ss_dssp THHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
T ss_conf 6789999999998
No 7
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=1.00 E-value=1 Score=76.82 Aligned_cols=50 Identities=22% Similarity=0.548 Sum_probs=40.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 5432153344676579940127899974421322038999989876569992
Q 000320 1590 AFVTTCNICHLDIETGQGWRCEVCPDYDVCNACYQKDGGIDHPHKLTNHPST 1641 (1673)
Q Consensus 1590 ~f~~tCn~C~~~I~tG~rwhC~vCpDfDLC~~Cy~k~g~~~H~HkL~~~~s~ 1641 (1673)
...+.|+.|....+.|.||+|.+|+|||||..||.+ +.+ -.|.+..+..+
T Consensus 29 H~gv~Cd~C~~~pI~G~RykC~~C~d~DLC~~C~~~-~~H-~~H~f~~i~~~ 78 (98)
T 2dip_A 29 HLGIPCNNCKQFPIEGKCYKCTECIEYHLCQECFDS-YCH-LSHTFTFREKR 78 (98)
T ss_dssp CCCCCCSSSCCSSCCSCEEEESSSSSCEEEHHHHHT-TSG-GGSCEEECCSS
T ss_pred CCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHCC-CCC-CCCCEEEECCC
T ss_conf 698798698888730675788879993078897746-987-88981681688
No 8
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=1.00 E-value=1 Score=76.08 Aligned_cols=47 Identities=26% Similarity=0.796 Sum_probs=38.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC----CCCCCCCCCCC
Q ss_conf 3215334467657994012789997442132203899----99898765699
Q 000320 1592 VTTCNICHLDIETGQGWRCEVCPDYDVCNACYQKDGG----IDHPHKLTNHP 1639 (1673)
Q Consensus 1592 ~~tCn~C~~~I~tG~rwhC~vCpDfDLC~~Cy~k~g~----~~H~HkL~~~~ 1639 (1673)
.+.|+.|...++.|.||+|.+|+|||||..||.+ |. +.-.|+|....
T Consensus 11 ~~~Cd~C~~~pi~G~RykC~~C~d~DLC~~C~~~-g~~~~~H~~~H~~~~~~ 61 (63)
T 2e5r_A 11 PVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWR-GHAGGSHSNQHQMKEYT 61 (63)
T ss_dssp CSCCSSSCCCSSCSCEEEESSCSSCEECHHHHHH-CCCCSSSCTTCCEEEEC
T ss_pred CCCCCCCCCCCEECCEEEECCCCCCHHHHHHHHC-CCCCCCCCCCCCEEEEE
T ss_conf 7899299886263523883679984147888868-77679999987889985
No 9
>3t92_A Histone acetyltransferase P300 TAZ2-ccaat/enhance protein epsilon; TAZ2 domain, zinc finger, transcription, 300/CBP, C/EBP PROT transferase; HET: TCE TAM; 1.50A {Homo sapiens} PDB: 2k8f_A 2ka6_A 2kje_A 1f81_A
Probab=1.00 E-value=1 Score=75.62 Aligned_cols=66 Identities=24% Similarity=0.595 Sum_probs=58.7
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC---CCCCCHHHHHHH-HHHHHHCCCCCCC--CCCCC
Q ss_conf 999840012699999998741038899986136999---999716778888-9987820899999--87765
Q 000320 734 QKLWRHMDNCTSSQCPYPRCHHSKILIHHHKHCRDP---SCPVCVPVKNYL-QQQKERARPKTDS--CLPSS 799 (1673)
Q Consensus 734 K~lL~Hm~~C~~~~C~~~~C~sSr~Ll~H~k~C~~~---~CpvC~pvR~~i-~~~~~~s~~~~~v--c~p~~ 799 (1673)
-++|.|+..|..+.|.+|+|...+.||.|+..|+.. .|++|..++.++ .|++.|.+..|+| |.+.+
T Consensus 17 l~~L~HA~~C~~~~C~~p~C~~mK~ll~H~~~C~~r~~~~c~~C~~~~~Ll~~Hak~C~~~~C~VP~C~~iK 88 (121)
T 3t92_A 17 IQSLVHAAQCRNANCSLPSCQKMKRVVQHTKGCKRKTNGGCPICKQLIALAAYHAKHCQENKCPVPFCLNIK 88 (121)
T ss_dssp HHHHHHHHHCCCTTCCCHHHHHHHHHHHHHHHCSSTTTTTCHHHHHHHHHHHHHHTTCCCTTCCSTTHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
T ss_conf 999997740937899970438999999999980689999997449999999999976799999998658899
No 10
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=1.00 E-value=1 Score=73.55 Aligned_cols=52 Identities=23% Similarity=0.553 Sum_probs=41.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCHHHHHCC---CCCCCCCCCCCCCCC
Q ss_conf 54321533446765799401278999---74421322038---999989876569992
Q 000320 1590 AFVTTCNICHLDIETGQGWRCEVCPD---YDVCNACYQKD---GGIDHPHKLTNHPST 1641 (1673)
Q Consensus 1590 ~f~~tCn~C~~~I~tG~rwhC~vCpD---fDLC~~Cy~k~---g~~~H~HkL~~~~s~ 1641 (1673)
...+.|+.|....+.|.||+|.+|+| ||||..||.+. +.+.-.|+|..+..+
T Consensus 19 H~~~~Cd~C~~~pI~G~RykC~~C~d~~~yDLC~~C~~~g~~~~~H~~~H~~~~i~~~ 76 (82)
T 2fc7_A 19 HVGFKCDNCGIEPIQGVRWHCQDCPPEMSLDFCDSCSDCLHETDIHKEDHQLEPIYRS 76 (82)
T ss_dssp ESSCCCSSSCCSSEESCEEEESSSCSSSCCEEEGGGTTCCCCCSSCCSSSCEEEECSC
T ss_pred ECCCCCCCCCCCCCEECEEECCCCCCCCCEECHHHHHHCCCCCCCCCCCCCEEEEECC
T ss_conf 5868987987875660337898087986605178887485666888999998886088
Done!