Your job contains 1 sequence.
>000322
MVKNASGNNLSCTVDIQPRNTTQSNSLKSFEQNRVTFKSNTPGWFPSSGKNDNLVISFSD
DDSGSDTEDYRHKTAFENKSNTTRVDGSGRPPTSSAVKVKNLQQTARNVSKAIPKKLSPS
RTLTTTRNHGGANSWVSRPPSVDQRSRVRNFSIKTKLGSLECGDQVGLRNSKLQDLRQQI
ALRESELKLKAAQQNKDLVIDSCENYHLGRLDQKEPDKKRLKVSGSYSHRLTTDGRQDIP
ATKSTVPVKEPTPERSSLQDGNKVDRSQKDIPRSRIESEIVKWDKQNGKQVHVPPENVLS
VVKDVANPNASCNQSDRDSRRVNTGPVLHNTSQLANMTSSNFLKNAQERIESDPASTAAG
CHPSSFLSNATREQNVMENSEYTKAISGDKIDGPSFNNVHQVNTASLGNFSGNGNVSGNS
NVDIQSLLDMEELLDKELEEAQEHRRICEIEERKALKAYRKAQRALIEANASCTKLYRQR
ELCSARFRSFVMDDSNLLWSSGQHETLGNEFDLSKHVSGNMHLAPTSTHQMQSGYVGYNQ
GGYDSSMQCINGDLQNFSHEHENGQNLGSEPCSEQDASTSELLPRKSKNALNGISPQSNE
LMVSADEEEEACQLDLESVQPNFEYQQKDQIAEGRQISTDYRHNNKLSAVSSQDPLLLEA
TLRSELFARLGMRTFSKDSGSCFNVEPSVEQRADNDIGSDKMQMSNGSVPSSGEQSQQHD
IGGTDKPERRIQEAPFQIQDKCLVEKGLLEFHSTYHSKGNKFPTTMNHSTSVLLSPPILR
GAFGHLKSELCIALSNQSGNQHNHGRNFEIEEVACVNSDKTQACYLIANSKPDIVKGYVG
KEMGSYTCNLAIDPLWPLCMYELRGKCNNDECPWQHVKYFADRNKNLHDDSDSAGCQIGS
TIPQEHCNVGTKLSKGHDILTPPTYIVGLDILKADSYQYQSVIARRHGLCWQKCLSVSLA
ISSIYPKDLPADLSLIGDGRIECIGSWNRQSSFFRSRNGVLNKLKQVELSNEQCVEMALL
ILNQDANKLEGMKKALSLLSRALEADPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHN
EGSYALWLMYINSRTPLNHRLDAYDAALSVLCRCASASDGDEMHASACILDLFLQMLQCF
CMSGNTEKAIQRISRLLIPATGSNDRHSLFLSDILTCLTISDKLIFWVCCVYLVIYRKLP
DAVLQLLECEKELFAIDWPPVQLEDDEKQRAIKLIEMAVNSVELYSNGESLEKETNLRSA
HCFAVNHIWCMAVLNGLECSMNLLEKYIKLYPSCLELVLMKARLQKHDFGDLSSVGFEEA
LIKWPKGVPGIQCIWNQYVEYALQNGRHDFAAELMDRWFHSVWKVQYSQVEISDPLVADM
SHSSPESTSTSDPEFSVSNRNQMDVMFGYLNLSLHRLLQNDWNEARLAIDAALKAAASEH
FKHCVREHAMLLLINESEPKEGAPISWQLKLLNSYLDRARSLPYLKLLPRQFINNIERPR
LQQLIDNLLSPVSSDFSLVNLVLEVCYGPSLLPRNFSKLKDLVDFVEGIMEIVPSNYQLA
FSVFKLLNKDHNPNITDAVPESVLFWASSSLVSAIFHAVPVAPEYVWVEAAGILGNISSI
EEISERFFKRALSVYPFSIKLWKCYYDLSKTKGDLNTIVKAAREKGIELD
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000322
(1670 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2039797 - symbol:AT2G39580 "AT2G39580" species... 1527 5.0e-219 3
UNIPROTKB|E1C1R6 - symbol:ZFC3H1 "Uncharacterized protein... 160 7.7e-11 5
UNIPROTKB|O60293 - symbol:ZFC3H1 "Zinc finger C3H1 domain... 131 3.4e-07 6
UNIPROTKB|E2QSB0 - symbol:ZFC3H1 "Uncharacterized protein... 123 1.1e-06 6
UNIPROTKB|F6UU41 - symbol:ZFC3H1 "Uncharacterized protein... 123 1.1e-06 6
UNIPROTKB|E1BIV7 - symbol:LOC781886 "Uncharacterized prot... 122 2.5e-06 6
UNIPROTKB|E9PTM2 - symbol:E9PTM2 "Uncharacterized protein... 107 0.00019 6
UNIPROTKB|F1MAP0 - symbol:F1MAP0 "Uncharacterized protein... 107 0.00019 6
>TAIR|locus:2039797 [details] [associations]
symbol:AT2G39580 "AT2G39580" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 InterPro:IPR019607 Pfam:PF10650
IPI:IPI00544933 RefSeq:NP_181490.5 UniGene:At.43594 PRIDE:F4IVX7
EnsemblPlants:AT2G39580.1 GeneID:818543 KEGG:ath:AT2G39580
OMA:LMYINSR Uniprot:F4IVX7
Length = 1577
Score = 1527 (542.6 bits), Expect = 5.0e-219, Sum P(3) = 5.0e-219
Identities = 322/642 (50%), Positives = 421/642 (65%)
Query: 1034 KALSLLSRALEADPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYALWLMYINS 1093
+ALSLLS+ LE DPTSEILW YLLI+++ S GKD MFSY VKH+ SY +WLMYINS
Sbjct: 950 QALSLLSQGLEGDPTSEILWAVYLLIYHAYEGSDGKD-MFSYGVKHSSRSYVIWLMYINS 1008
Query: 1094 RTPLNHRLDAYDAALSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTEKAIQRI 1153
R LN +L AYD ALS LC AS S D HASACILD+ LQM C+SGN KAIQRI
Sbjct: 1009 RGQLNDQLIAYDTALSALCNHASGSI-DRNHASACILDVLLQMFNLLCISGNVSKAIQRI 1067
Query: 1154 SRLLIPATGSNDRHSLFLSDILTCLTISDKLIFWVCCVYLVIYRKLPDAVLQLLECEKEL 1213
S+L PA S+D +S ILTCLT SDK +FWVCCVYLVIYRKLPD++++ LE EKEL
Sbjct: 1068 SKLQAPAAVSDDPDFSLMSHILTCLTYSDKCVFWVCCVYLVIYRKLPDSIIRRLEMEKEL 1127
Query: 1214 FAIDWPPVQLEDDEKQRAIKLIEMAVNSVELYSNGESLEKETNLRSAHCFAVNHIWCMAV 1273
I+WP V L+ D KQ A++L + + SVE + ++K R A FA+N+ M
Sbjct: 1128 LEIEWPTVNLDGDLKQMALRLFDKGMRSVE-HGTNNGIQK----RPAGLFALNYALFMIA 1182
Query: 1274 LNGLECSMNLLEKYIKLYPSCLELVLMKARLQKHDFGDLSSVGFEEALIKWPKGVPGIQC 1333
++ LE ++L+ ++LYP+CLEL L+ R+Q ++ D+ S GFEE L + K IQC
Sbjct: 1183 VDELESRRDILKASVQLYPTCLELKLLAVRMQSNELKDMFSSGFEELLKQEAKEASCIQC 1242
Query: 1334 IWNQYVEYALQNGRHDFAAELMDRWFHSVWKV---QYSQVEISDPLVADMXXXXXXXXXX 1390
IWNQY EYAL+ G +D A ELM RW+ SVW V +Y V ++ D
Sbjct: 1243 IWNQYAEYALEGGSYDLARELMSRWYGSVWDVLSHKYKTVRGNEEEGDD------NMLES 1296
Query: 1391 XXXXXXVSNRNQMDVMFGYLNLSLHRLLQNDWNEXXXXXXXXXXXXXSEHFKHCVREHAM 1450
V++ +Q+DVMFGYLNLSLH LLQ++W E EHF HC+REHA+
Sbjct: 1297 ALSDLNVAS-DQVDVMFGYLNLSLHNLLQSNWTEARLAIDQALKATAPEHFMHCLREHAV 1355
Query: 1451 LLLINESEPKEGAPISWQLKLLNSYLDRARSLPYLKLLPRQFINN-IERPRLQQLIDNLL 1509
LINE + I+ Q++LLNSYLDRA SLP + L +FI+N E+PR+++L+ NLL
Sbjct: 1356 FQLINELQATGEFSINLQMRLLNSYLDRASSLPVKEPLSWKFISNSAEKPRVRKLVTNLL 1415
Query: 1510 SPVSSDFSLVNLVLEVCYGPSLLPRNFSKLKDLVDFVEGIMEIVPSNYQLAFSVFKLLNK 1569
+PVSS+ +VN+VLE +GPSL+P SK K+LVDFVE I+ +VPSNY LA SV KLL K
Sbjct: 1416 APVSSELFVVNVVLEAWHGPSLVPEKLSKQKELVDFVETILGLVPSNYPLALSVSKLLRK 1475
Query: 1570 DHNPNITDAVPESVLFWASSSLVSAIFHAVPVAPEYVWVEAAGILGNISSIEEISERFFK 1629
+ + + + + FWA +L S I A+PVAPEY+WVEA I+ +I+ + +ERF K
Sbjct: 1476 EEKQSDSGS-SSGIHFWAGLNLASTISCAIPVAPEYIWVEAGEIVSDINGFKTRAERFLK 1534
Query: 1630 RALSVYPFSIKLWKCYYDLSKTKGDLN--TIVKAAREKGIEL 1669
+ALSVYP S+KLW+CY+ L K+ + I +AAR+KGI L
Sbjct: 1535 KALSVYPMSVKLWRCYWSLCKSIEERRGIEIEEAARKKGITL 1576
Score = 369 (135.0 bits), Expect = 5.0e-219, Sum P(3) = 5.0e-219
Identities = 110/363 (30%), Positives = 181/363 (49%)
Query: 730 RIQEAPFQIQ-DKCLVEKGLLEFHSTYHSKGNKFPTTMNHSTSVLLSPPILRGAFGHLKS 788
++Q +P + ++ +E+ L + + + ++ +SV LS P+ R HLK
Sbjct: 693 KLQGSPSEAPVERRSIEENSLNYQLSIDMESHRSSPENALLSSVALSGPLFRSTIYHLK- 751
Query: 789 ELCIALSNQSGNQHNHGRNFEIE-EVACVNSDKTQACYLIANSKPDIVKGYVGKEMGSYT 847
+ S+ + + G + ++ + + SDK Q C + + IV Y K++G YT
Sbjct: 752 ---VPGSSIT----SLGPEYILQNKTYSLYSDKRQ-CRSLTET---IV--YE-KKIGFYT 797
Query: 848 CNLAIDPLWPLCMYELRGKCNNDECPWQHVKYFADRNKNLHDDSDSAGCQIGSTIPQEHC 907
CNL +DP WPLCMYELRG+CNNDEC WQH K F+D +LH ++GS+ Q+
Sbjct: 798 CNLKVDPSWPLCMYELRGRCNNDECSWQHFKDFSD--DSLHQSLHDPDGRVGSSSHQKTH 855
Query: 908 NVGTKLSKGHDILTPPTYIVGLDILKADSYQYQSVIARRHGLCWQKCLSVSLAISSIYPK 967
N +K S+ D + PTY+V LD +K DS+ Y+SV+A+RHG W K S LA S+ +
Sbjct: 856 N-SSKGSQILDSVFSPTYLVSLDTMKVDSWSYESVLAQRHGQIWCKHFSACLASSNSLYR 914
Query: 968 DLPADLSLIGDGRIECIGSWNRQSSFFRSRNGVLNKLKQV------ELSNEQCVEMALLI 1021
++PA + +GRI +G+ SS+FR ++ ++ + Q L + E+ +
Sbjct: 915 NVPAKEN---EGRIVVLGNSKTYSSYFRIKHSLMWHIFQALSLLSQGLEGDPTSEILWAV 971
Query: 1022 LNQDANKLEGMKKALSLLSRALEADPTSEILWITYLLIFYS-NTNSVGKDDMFSYSVKHN 1080
+ EG + S ++ S ++W+ Y+ N + D S H
Sbjct: 972 YLLIYHAYEG-SDGKDMFSYGVKHSSRSYVIWLMYINSRGQLNDQLIAYDTALSALCNHA 1030
Query: 1081 EGS 1083
GS
Sbjct: 1031 SGS 1033
Score = 259 (96.2 bits), Expect = 5.0e-219, Sum P(3) = 5.0e-219
Identities = 126/523 (24%), Positives = 224/523 (42%)
Query: 116 KLSPSRTLTTTRNHGG-ANSWVSRPPSVDQRSRVRNFSIKTKLGSLECGDQVGLRNSKLQ 174
K+ P T++ RN + + + P +D R+ + ++ T S +V S +
Sbjct: 124 KIQPKGTISGNRNPSTFSQTKLKGPRQIDIRAITKK-ALSTSTFSHAATSKVS-NLSFAK 181
Query: 175 DLRQQIALRESELKLKAAQQNKDLVIDSCENYHLGRLDQKEPDKKRLKVSGSYSHRLTTD 234
+++ + SE + Q + +++S N Q + LK+ + + +
Sbjct: 182 EMKSNKYIHSSERTVSKDAQRPEQIVESNSNKLQDLKQQIALRESELKLKAAQPKKDAVN 241
Query: 235 GRQDIPATKSTVPVKEPTPERSSLQDGNKVDRSQKDIPRSRIESEIVKWDKQNGKQVHVP 294
+ PA + ++ + + T L+ + +K + S I++ D + P
Sbjct: 242 PKIT-PARRVSI-ISDDTRH---LEPN---EPPKKRLKVSGIDTSQPVIDYRVAASAAAP 293
Query: 295 ---PENVLSVVKDVANPNASCNQSDRDSRRVNTGPVLHNTSQLANMTSSNFLKNAQERIE 351
P+ S++ V N N+SC S + PV+ + N TSS+ L+ + ++
Sbjct: 294 MNAPDIRKSLLPGV-NANSSCKHLGSKSDEI-VPPVIPQHTVEGN-TSSSVLQKSTGKVN 350
Query: 352 SDPASTAAGCHPSSFLSNATREQNVMENSEYTKAISGDK--IDGPSFNNVHQV---NTAX 406
G + N R + + + K ++G+ S NN ++ N +
Sbjct: 351 H-----YEGGRELETMKNVDRS---VSSEQLLKIVNGNHQVFSRSSNNNWKRLPCSNNSG 402
Query: 407 XXXXXXXXXXXXXXXVDIQSXXXXXXXXXXXXXXAQEHRRICEIEERKALKAYRKAQRAL 466
+D+ S AQE +R+ EIEER ALK YRKAQR+L
Sbjct: 403 LYNIPGSTTVPGHSQLDMLSLTNLEESLDKELEEAQERKRLFEIEERNALKVYRKAQRSL 462
Query: 467 IEANASCTKLYRQRELCSARFRSFVMDDSNLLWSSGQHETLGNEFDLSKHVSGNMHLAPT 526
IEANA C +LY +RE+ SA + S ++ DS LLW S E F + +G++ LA T
Sbjct: 463 IEANARCAELYSKREILSAHYGSLIVRDSRLLWPSIHGENPETGFHFLNNSTGSIDLA-T 521
Query: 527 STHQMQSGYVGYNQGGYDSSMQCINGDLQNFSHEHENGQNLGSEPCSEQDASTSELLPRK 586
T Q + N Y+S + + S +GQNLG S+ ASTS+ LP
Sbjct: 522 KTDIAQHSQLESNHK-YNS--EYVGSHPPPHSR---SGQNLGY---SDLGASTSDGLPCG 572
Query: 587 SKNALNGISPQSNELMVSADEEEEACQLDLESVQPNFEYQQKD 629
+K + + S++ + D+E + +D ES + N +Q+++
Sbjct: 573 NKQTASRLCSPSSDANILPDDE--SFPVDHESTEGNPGHQKEN 613
Score = 245 (91.3 bits), Expect = 1.5e-217, Sum P(3) = 1.5e-217
Identities = 91/239 (38%), Positives = 123/239 (51%)
Query: 45 FPSSGKNDNLVISFSDDDSGSDTEDYRHKTAFENKSNTTRVDGSGRPPTSSAVKVKNLQQ 104
FP G N NLVI+FSDDDSGS++ D + +T + G+ P T S K+K +Q
Sbjct: 92 FPVRGNNSNLVINFSDDDSGSES-DCKGRTQTSKIQPKGTISGNRNPSTFSQTKLKGPRQ 150
Query: 105 TARNVSKAIPKK-LSPSRTLTTTRNHGGANSWVSRPP-SVDQRS-RVRNFSIKTKLGSLE 161
++ +AI KK LS T+T +H A S VS + + +S + + S +T +
Sbjct: 151 I--DI-RAITKKALS-----TSTFSHA-ATSKVSNLSFAKEMKSNKYIHSSERTVSKDAQ 201
Query: 162 CGDQVGLRNS-KLQDLRQQIALRESELKLKAAQQNKDLV---IDSCENYHL-----GRLD 212
+Q+ NS KLQDL+QQIALRESELKLKAAQ KD V I + L+
Sbjct: 202 RPEQIVESNSNKLQDLKQQIALRESELKLKAAQPKKDAVNPKITPARRVSIISDDTRHLE 261
Query: 213 QKEPDKKRLKVSGSYSHRLTTDGRQDIPATKSTVPVKEPTPERSSLQDGNKVDRSQKDI 271
EP KKRLKVSG + + D R A + P+ P R SL G + S K +
Sbjct: 262 PNEPPKKRLKVSGIDTSQPVIDYRV---AASAAAPMNAPDI-RKSLLPGVNANSSCKHL 316
Score = 170 (64.9 bits), Expect = 5.0e-198, Sum P(3) = 5.0e-198
Identities = 49/156 (31%), Positives = 79/156 (50%)
Query: 633 EGRQISTDYRHNNKLSAVSSQDPLLLEATLRSELFARLGMRTFSKDSGSCFNVEPSVEQR 692
E + + ++ N + +Q+ LLLEA+LRS+LF RLGMR S+ G+CFN E +++
Sbjct: 601 ESTEGNPGHQKENIDQTLGNQNALLLEASLRSKLFDRLGMRAESR-GGTCFNEETVIDRG 659
Query: 693 ADNDIGSDKMQMSNGSVPSSGEQSQQHDIG-GTDKPERRIQEAPFQIQDKCLVEKGLLEF 751
+ D GS+ Q NGS P S + G +K + EAP + + +E+ L +
Sbjct: 660 DERDFGSEGTQRDNGS-PFSEIYLHNDSLEPGANKLQGSPSEAPVERRS---IEENSLNY 715
Query: 752 HSTYHSKGNKFPTTMNHSTSVLLSPPILRGAFGHLK 787
+ + ++ +SV LS P+ R HLK
Sbjct: 716 QLSIDMESHRSSPENALLSSVALSGPLFRSTIYHLK 751
Score = 55 (24.4 bits), Expect = 1.7e-197, Sum P(3) = 1.7e-197
Identities = 53/248 (21%), Positives = 95/248 (38%)
Query: 44 WFPSSGKNDNLVISFSDDDSGS-D----TEDYRHKTAFENKSNTTRVDGSGRPPTSSAVK 98
W G+N F ++ +GS D T+ +H N + GS PP S + +
Sbjct: 495 WPSIHGENPETGFHFLNNSTGSIDLATKTDIAQHSQLESNHKYNSEYVGSHPPPHSRSGQ 554
Query: 99 VKNLQQTARNVSKAIP--KKLSPSRTLTTTRNHGGANSWVSRPPSVDQRSRVRNFSIKTK 156
+ S +P K + SR + + + S P VD S N + +
Sbjct: 555 NLGYSDLGASTSDGLPCGNKQTASRLCSPSSDANILPDDESFP--VDHESTEGNPGHQKE 612
Query: 157 LGSLECGDQVGLR-NSKLQD-LRQQIALRESELKLKAAQQNKDLVIDSCENYHLGRLDQK 214
G+Q L + L+ L ++ +R +E + N++ VID + G +
Sbjct: 613 NIDQTLGNQNALLLEASLRSKLFDRLGMR-AESR-GGTCFNEETVIDRGDERDFGS-EGT 669
Query: 215 EPDKKRLKVSGSYSHRLTTD-GRQDIPATKSTVPVKEPTPERSSLQDGNKVD-RSQKDIP 272
+ D S Y H + + G + + S PV+ + E +SL +D S + P
Sbjct: 670 QRDNGS-PFSEIYLHNDSLEPGANKLQGSPSEAPVERRSIEENSLNYQLSIDMESHRSSP 728
Query: 273 RSRIESEI 280
+ + S +
Sbjct: 729 ENALLSSV 736
Score = 49 (22.3 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 570 EPCSEQDASTSELLPRKSKNALNGISPQSNELMV 603
EP S + S S PR K N ++P S+EL V
Sbjct: 1391 EPLSWKFISNSAEKPRVRKLVTNLLAPVSSELFV 1424
Score = 43 (20.2 bits), Expect = 2.8e-28, Sum P(3) = 2.8e-28
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 1014 CVEMALLILNQDANKLEGMKKA--LSLLSRALEADPTSEILWITY 1056
C+E+ LL + +N+L+ M + LL + + + +W Y
Sbjct: 1203 CLELKLLAVRMQSNELKDMFSSGFEELLKQEAKEASCIQCIWNQY 1247
Score = 40 (19.1 bits), Expect = 6.5e-196, Sum P(3) = 6.5e-196
Identities = 23/88 (26%), Positives = 33/88 (37%)
Query: 67 TEDYRHKTAFENKSNTTRVDGSGRPPTSSAVKVKNLQQTARNVSKA--IPKKLSPSRTLT 124
++D RH E +V G TS V + +A A I K L P
Sbjct: 254 SDDTRHLEPNEPPKKRLKVSGID---TSQPVIDYRVAASAAAPMNAPDIRKSLLPGVNAN 310
Query: 125 TTRNHGGANSWVSRPPSVDQRSRVRNFS 152
++ H G+ S PP + Q + N S
Sbjct: 311 SSCKHLGSKSDEIVPPVIPQHTVEGNTS 338
Score = 39 (18.8 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 17/51 (33%), Positives = 22/51 (43%)
Query: 1201 DAVLQLLECEKELFAIDWPPVQLEDDEKQRAIKLIEMAVNSVELYSNGESL 1251
D L+ + K LF I+ + QR+ LIE ELYS E L
Sbjct: 431 DKELEEAQERKRLFEIEERNALKVYRKAQRS--LIEANARCAELYSKREIL 479
Score = 38 (18.4 bits), Expect = 2.0e-158, Sum P(2) = 2.0e-158
Identities = 7/24 (29%), Positives = 16/24 (66%)
Query: 1021 ILNQDANKLEGMKKALSLLSRALE 1044
I+ ++NKL+ +K+ ++L L+
Sbjct: 206 IVESNSNKLQDLKQQIALRESELK 229
>UNIPROTKB|E1C1R6 [details] [associations]
symbol:ZFC3H1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] InterPro:IPR003107
InterPro:IPR013026 PROSITE:PS50293 SMART:SM00386 GO:GO:0005622
GO:GO:0006396 InterPro:IPR019607 Pfam:PF10650 OMA:PKTLNFE
GeneTree:ENSGT00390000001116 EMBL:AADN02009847 IPI:IPI00583825
Ensembl:ENSGALT00000016545 Uniprot:E1C1R6
Length = 1696
Score = 160 (61.4 bits), Expect = 7.7e-11, Sum P(5) = 7.7e-11
Identities = 79/322 (24%), Positives = 143/322 (44%)
Query: 993 FFRSRNGVLNKLK---QVELSNEQC-VEMALLILNQ-DANKLEGMKKALSLLSRALEADP 1047
+F S ++ L+ Q N Q +++A LNQ + + E + L++L+RALE +
Sbjct: 1045 YFTSETDDISNLEASVQENPCNVQLWIKLAYKYLNQNEGSSSECLDSTLNVLARALENNK 1104
Query: 1048 TSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYALWLMYINSRTPLNHRLDAYDAA 1107
+ +W YL +F +M +V++ SY +W ++N L D D
Sbjct: 1105 ENPEIWCHYLRLFSKRGTKEEIQEMCETAVEY-AASYQIWWTFLN----LESSFDGKDYV 1159
Query: 1108 LS-VLCRCASASDGDEMHA--SACILDLFLQMLQCFCMSGNTEKAIQRISRLLIPATGSN 1164
+L ++G+E + S +L+ L + +G + A+ + L A N
Sbjct: 1160 CGRILQFLMEVTEGEENPSLLSFQLLETLLYRVHLSLFTGRYQNALLLLQNALKSA---N 1216
Query: 1165 DRHSLFLSDILTCLTISDKLIFWVCCVYLVIYRKLPDAVLQLLEC------EKELFAIDW 1218
++ +S+ LT +SD+ + W+ ++L+ + LP KE F I W
Sbjct: 1217 EK---IISERLT---LSDRCLAWLSYIHLIEFNTLPVKFYDPANVGPSRIMNKEPFLIPW 1270
Query: 1219 PPVQLEDDEKQRAIKLIEMAVNSVELYSNGESLEKETNLRSAHCFAV--NHIWCMAVLNG 1276
VQ D K L+ M ++V+ ++ E+LE + R A CF + N I + +L
Sbjct: 1271 QTVQ---DVKTDPDTLLAMFEDAVKTCTD-ENLEADK--RIAVCFPLYRNMIALLKLLER 1324
Query: 1277 LECSMNLLEKYIKLYPS-CLEL 1297
E ++ L ++L P+ CL L
Sbjct: 1325 WESAVELCRSLLELCPNNCLLL 1346
Score = 98 (39.6 bits), Expect = 7.7e-11, Sum P(5) = 7.7e-11
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 843 MGSYTCNLAIDPLWPLCMYELRGKCNNDECPWQHVKYFADRNKNLHDD 890
+ S T + I+P C ++L G CN+D+C WQH+K K L D
Sbjct: 878 LSSVTYSNMIEPKQCFCRFDLTGTCNDDDCQWQHMKDCTLSRKQLFQD 925
Score = 52 (23.4 bits), Expect = 7.7e-11, Sum P(5) = 7.7e-11
Identities = 23/99 (23%), Positives = 44/99 (44%)
Query: 100 KNLQQTARNVSKAIPKKLSPSRTLTTTRNHGGANSWVSRPPSVDQRSRVRNFSIKTKLGS 159
K QQ + V K +KL+ ++T+T + A + ++ S + +R KT
Sbjct: 91 KKWQQKEQQVMKESKEKLTKTKTVTQ-KVKASAKAHSTKKTSSTGKQTLRKQQTKTSKKI 149
Query: 160 LECGDQVGLRNSKLQDLRQQIALRESELKLKAAQQNKDL 198
+ +Q R K +D R+Q E + + ++ +DL
Sbjct: 150 QQQKEQD--RRQKEEDQRKQEEEEERRKREEEIRKIRDL 186
Score = 51 (23.0 bits), Expect = 7.7e-11, Sum P(5) = 7.7e-11
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 1628 FKRALSVYPFSIKLWK--CYYDLS---KTKGDLNTIVKAAREKGIELD 1670
++RAL P LWK ++ S KT +L +V +E G+ LD
Sbjct: 1635 YQRALHKLPLCATLWKDQLLFEASGGGKTD-NLRKLVSKCQEVGVSLD 1681
Score = 48 (22.0 bits), Expect = 2.0e-10, Sum P(5) = 2.0e-10
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 166 VGLRNSKLQDLRQQIALRESELKLKAAQQNKD 197
+ L +LQ L + AL+ +LK A Q K+
Sbjct: 668 IALEKKRLQQLEYEYALKIQKLKEARALQTKE 699
Score = 45 (20.9 bits), Expect = 4.0e-10, Sum P(5) = 4.0e-10
Identities = 21/120 (17%), Positives = 45/120 (37%)
Query: 164 DQVGLRNSKLQDLRQQIALRESELKLKAAQQNKDLVIDSCENYHLGRLDQKEPDKKRLKV 223
+Q R D+ + L E E ++ Q + + + + + K++L
Sbjct: 51 EQTSTRKPSSSDVTSEKKLLEEEEEMSELQLRLLALQSASKKWQQKEQQVMKESKEKLTK 110
Query: 224 SGSYSHRLTTDGR-QDIPATKSTVPV---KEPTPERSSLQDGNKVDRSQKDIPRSRIESE 279
+ + + ++ + T ST K+ T +Q + DR QK+ + + E E
Sbjct: 111 TKTVTQKVKASAKAHSTKKTSSTGKQTLRKQQTKTSKKIQQQKEQDRRQKEEDQRKQEEE 170
Score = 38 (18.4 bits), Expect = 7.7e-11, Sum P(5) = 7.7e-11
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 1538 KLKDLVDFVEGIMEIVPSNYQLAFS 1562
+ K D V + VP+ Y + FS
Sbjct: 1512 EFKVFTDLVNRCLVTVPTRYPIPFS 1536
>UNIPROTKB|O60293 [details] [associations]
symbol:ZFC3H1 "Zinc finger C3H1 domain-containing protein"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003107 InterPro:IPR013026
PROSITE:PS50005 PROSITE:PS50103 PROSITE:PS50293 SMART:SM00386
GO:GO:0046872 GO:GO:0005622 GO:GO:0006396 eggNOG:NOG274922
InterPro:IPR019607 Pfam:PF10650 EMBL:AB011118 EMBL:BC064336
EMBL:BC073843 EMBL:AK125035 IPI:IPI00059925 IPI:IPI00175146
IPI:IPI00743894 PIR:T00325 RefSeq:NP_659419.3 UniGene:Hs.527874
ProteinModelPortal:O60293 IntAct:O60293 MINT:MINT-1481977
STRING:O60293 PhosphoSite:O60293 PaxDb:O60293 PRIDE:O60293
DNASU:196441 Ensembl:ENST00000378743 Ensembl:ENST00000548100
Ensembl:ENST00000552994 GeneID:196441 KEGG:hsa:196441
UCSC:uc001swo.2 UCSC:uc001swp.3 CTD:196441 GeneCards:GC12M072003
H-InvDB:HIX0010820 HGNC:HGNC:28328 HPA:HPA007072 HPA:HPA007151
neXtProt:NX_O60293 PharmGKB:PA164727644 HOGENOM:HOG000060198
HOVERGEN:HBG095534 InParanoid:O60293 OMA:PKTLNFE OrthoDB:EOG4CNQQ7
GenomeRNAi:196441 NextBio:89476 ArrayExpress:O60293 Bgee:O60293
CleanEx:HS_ZFC3H1 Genevestigator:O60293 Uniprot:O60293
Length = 1989
Score = 131 (51.2 bits), Expect = 3.4e-07, Sum P(6) = 3.4e-07
Identities = 71/331 (21%), Positives = 135/331 (40%)
Query: 993 FFRSRNGVLNKLKQVELSNEQCVEMALLI----LNQDANKL-EGMKKALSLLSRALEADP 1047
+F + + L+ L N V++ L + LNQ+ + E + AL++L+RALE +
Sbjct: 1339 YFTNETDDIANLEASVLENPSHVQLWLKLAYKYLNQNEGECSESLDSALNVLARALENNK 1398
Query: 1048 TSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYALWLMYINSRTPLNHRLDAYDAA 1107
+ +W YL +F +M +V++ + W +++ + + +
Sbjct: 1399 DNPEIWCHYLRLFSKRGTKDEVQEMCETAVEYAPDYQSFWT-FLHLESTFEEKDYVCERM 1457
Query: 1108 LSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTEKAIQRISRLLIPATGSNDRH 1167
L L A + + S +L+ L +Q +G + A+ + L A ND
Sbjct: 1458 LEFLMGAAKQETSNIL--SFQLLEALLFRVQLHIFTGRCQSALAILQNALKSA---ND-- 1510
Query: 1168 SLFLSDILTCLTISDKLIFWVCCVYLVIYRKLPDAVLQLLE------CEKELFAIDWPPV 1221
+ L SD+ + W+ ++L+ + LP E F + W V
Sbjct: 1511 ----GIVAEYLKTSDRCLAWLAYIHLIEFNILPSKFYDPSNDNPSRIVNTESFVMPWQAV 1566
Query: 1222 QLEDDEKQRAIKLIEMAVNSVELYSNGESLEKETNLRSAHCFAVNHIWCMAVLNGLECSM 1281
Q D K L+ + ++V+ ++ ESL E + + N I +L E +M
Sbjct: 1567 Q---DVKTNPDMLLAVFEDAVKACTD-ESLAVEERIEACLPLYTNMIALHQLLERYEAAM 1622
Query: 1282 NLLEKYIKLYP-SC--LE-LVLMKARLQKHD 1308
L + ++ P +C LE LV + + +HD
Sbjct: 1623 ELCKSLLESCPINCQLLEALVALYLQTNQHD 1653
Score = 96 (38.9 bits), Expect = 3.4e-07, Sum P(6) = 3.4e-07
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 845 SYTCNLAIDPLWPLCMYELRGKCNNDECPWQHVKYFADRNKNLHDD 890
SY+ N+ I+P C ++L G CN+D+C WQH++ + K L D
Sbjct: 1174 SYS-NM-IEPDQCFCRFDLTGTCNDDDCQWQHIQDYTLSRKQLFQD 1217
Score = 54 (24.1 bits), Expect = 3.4e-07, Sum P(6) = 3.4e-07
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 1626 RFFKRALSVYPFSIKLWK--CYYDLSKT-KGD-LNTIVKAAREKGIELD 1670
R ++RAL P LWK ++ S+ K D L +V +E G+ L+
Sbjct: 1926 RLYQRALQKLPLCASLWKDQLLFEASEGGKTDNLRKLVSKCQEIGVSLN 1974
Score = 45 (20.9 bits), Expect = 3.4e-07, Sum P(6) = 3.4e-07
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 6 SGNNLSCTVD----IQPRNTTQSNSLKSFEQNRVTFKSNTPG 43
S +N+S T D + P TQ + ++FE + K PG
Sbjct: 271 STDNVSITKDSSKEVAPEEKTQVKTFQAFELKPLRQKLTLPG 312
Score = 44 (20.5 bits), Expect = 3.4e-07, Sum P(6) = 3.4e-07
Identities = 47/230 (20%), Positives = 100/230 (43%)
Query: 164 DQVGLRNSKLQDLRQQIALRESELKL-KAAQQNKDLVIDSCENYHLGRLDQKEPDKKRLK 222
D+ L+N Q+ +++ ++R +E K+ K +Q + + N + L + + R++
Sbjct: 843 DESVLKNLVQQEAKKKESVRNAEAKITKLTEQLQ--ATEKILNVNRMFLKKLQEQIHRVQ 900
Query: 223 VSGSYSHRLTTDGRQDIPATKSTVPVKEPTPERSSLQD--G-NKV---DRSQKDIPRSRI 276
+ LT +++ K+ V KE +R QD G NK+ D S PR
Sbjct: 901 QRVTIKKALTLKYGEELARAKA-VASKE-IGKRKLEQDRFGPNKMMRLDSSPVSSPRKH- 957
Query: 277 ESEIVKWDKQNGKQVHVPPENVLSVVKDVANPNASCNQSDRDSRRVNTGPVLHNTSQLAN 336
+E++ +K+ +++ E L + K + A + + N PV+ + +
Sbjct: 958 SAELIAMEKRRLQKLEY--EYALKIQK-LKEARAL-----KAKEQQNISPVVEEEPEFS- 1008
Query: 337 MTSSNFLKNAQERIESDPASTAAGCHPSSFLSNATREQ--NVMENSEYTK 384
+ + Q+++ D T LS ++RE+ + +E++ +TK
Sbjct: 1009 LPQPSLHDLTQDKLTLD---TEENDVDDEILSGSSRERRRSFLESNYFTK 1055
Score = 43 (20.2 bits), Expect = 4.2e-07, Sum P(6) = 4.2e-07
Identities = 19/75 (25%), Positives = 30/75 (40%)
Query: 553 DLQNFSHEHENGQNL-GSEPCSEQDASTSEL---LPRKSKNALNGISPQSNELMVSADEE 608
DL N ++ L G + S +S +L L ++ ++ GI N V+ D +
Sbjct: 477 DLSNQEEQYNRFMKLVGGKRRSRSKSSDPDLRRSLDKQPTDSGGGIYQYDNYEEVAMDTD 536
Query: 609 EEACQLDLESVQPNF 623
E VQP F
Sbjct: 537 SETSSPAPSPVQPPF 551
Score = 41 (19.5 bits), Expect = 6.5e-07, Sum P(6) = 6.5e-07
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 441 AQEHRRICEIEERKALKAYR-KAQRAL 466
A E RR+ ++E ALK + K RAL
Sbjct: 963 AMEKRRLQKLEYEYALKIQKLKEARAL 989
Score = 41 (19.5 bits), Expect = 1.0e-06, Sum P(6) = 1.0e-06
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 500 SSGQHETLGNEFDLSKHVSGNMHLAPTSTHQ 530
SS + L N F S+H S HL S+++
Sbjct: 76 SSSSQQQLRN-FSRSRHASERGHLRGPSSYR 105
Score = 39 (18.8 bits), Expect = 3.4e-07, Sum P(6) = 3.4e-07
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 1534 RN-FSKLKDLVDFVEGIMEIVPSNYQLAFS 1562
RN + K D V + VP+ Y + FS
Sbjct: 1800 RNKVQEFKFFTDLVNRCLVTVPARYPIPFS 1829
Score = 38 (18.4 bits), Expect = 4.2e-07, Sum P(6) = 4.2e-07
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 1405 VMFGYLNLSLHRLLQNDWNE 1424
VM L+L RLLQ++W E
Sbjct: 1866 VMPANSGLAL-RLLQHEWEE 1884
>UNIPROTKB|E2QSB0 [details] [associations]
symbol:ZFC3H1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006396 "RNA processing" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR003107
InterPro:IPR013026 PROSITE:PS50293 SMART:SM00386 GO:GO:0005622
GO:GO:0006396 InterPro:IPR019607 Pfam:PF10650
Ensembl:ENSCAFT00000000728 Uniprot:E2QSB0
Length = 1984
Score = 123 (48.4 bits), Expect = 1.1e-06, Sum P(6) = 1.1e-06
Identities = 68/331 (20%), Positives = 132/331 (39%)
Query: 993 FFRSRNGVLNKLKQVELSNEQCVEMALLI----LNQ-DANKLEGMKKALSLLSRALEADP 1047
+F + + L+ L N V++ L + LNQ D E + AL++L+RALE +
Sbjct: 1334 YFTNETDDIANLEASVLENPSHVQLWLKLAYKYLNQNDGLCSESLDSALNVLARALENNK 1393
Query: 1048 TSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYALWLMYINSRTPLNHRLDAYDAA 1107
+ +W YL +F +M +V++ + W +++ + + +
Sbjct: 1394 DNPEIWCHYLRLFSKRGTKEEVQEMCETAVEYAPDYQSFWT-FLHLESTFEEKDYVCERM 1452
Query: 1108 LSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTEKAIQRISRLLIPATGSNDRH 1167
+ L A D + S +L+ L +Q +G + A+ + L A G
Sbjct: 1453 VEFLMGAAKQEASDVL--SFQLLEALLFRVQLHIFTGRCQSALAVLQNALKSANGGI--- 1507
Query: 1168 SLFLSDILTCLTISDKLIFWVCCVYLVIYRKLPDAVLQLLECEK------ELFAIDWPPV 1221
+ L D+ + W+ ++L+ + LP E F + W V
Sbjct: 1508 ------VAEYLKTGDRCLAWLAYIHLIEFNVLPSKFYDPSNANPSRIVNTESFVMPWQAV 1561
Query: 1222 QLEDDEKQRAIKLIEMAVNSVELYSNGESLEKETNLRSAHCFAVNHIWCMAVLNGLECSM 1281
Q D K L+ + ++V+ ++ E+L E + N I +L E ++
Sbjct: 1562 Q---DVKTNPDMLLAVFEDAVKACTD-ENLTVEERVEVCVPLYTNMIALHQLLERYEAAV 1617
Query: 1282 NLLEKYIKLYP-SC--LE-LVLMKARLQKHD 1308
L ++ ++ P +C LE LV + + +HD
Sbjct: 1618 ELCKRLLETCPMNCQLLEALVALYLQTDQHD 1648
Score = 93 (37.8 bits), Expect = 1.1e-06, Sum P(6) = 1.1e-06
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 845 SYTCNLAIDPLWPLCMYELRGKCNNDECPWQHVKYFADRNKNLHDD 890
SY+ N+ I+P C ++L G CN+D+C WQH + + K L D
Sbjct: 1169 SYS-NM-IEPDQCFCRFDLTGTCNDDDCQWQHTQDYTLSRKQLFQD 1212
Score = 54 (24.1 bits), Expect = 1.1e-06, Sum P(6) = 1.1e-06
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 1626 RFFKRALSVYPFSIKLWK--CYYDLSKT-KGD-LNTIVKAAREKGIELD 1670
R ++RAL P LWK ++ S+ K D L +V +E G+ L+
Sbjct: 1921 RLYQRALQKLPLCASLWKDQLLFEASEGGKTDNLRKLVSKCQEIGVSLN 1969
Score = 50 (22.7 bits), Expect = 1.1e-06, Sum P(6) = 1.1e-06
Identities = 50/229 (21%), Positives = 100/229 (43%)
Query: 164 DQVGLRNSKLQDLRQQIALRESELKL-KAAQQNKDLV-IDSCENYHLGRLDQKEPDKKRL 221
D+ L+N Q+ +++ ++R +E K+ K +Q + I S L +L Q++ K +
Sbjct: 838 DESVLKNLVQQEAKKKESVRNAETKITKLTEQLQATEKILSVNRMFLKKL-QEQIHKVQQ 896
Query: 222 KVSGSYSHRLTTDGRQDIPATKSTVPVKEPTPERSSLQD--G-NKV---DRSQKDIPRSR 275
+V+ LT +++ K+ V KE +R QD G NK+ D S PR
Sbjct: 897 RVT--IKKALTLKYGEELARAKA-VASKE-IGKRKLEQDRLGPNKMMRLDNSPISSPRKH 952
Query: 276 IESEIVKWDKQNGKQVHVPPENVLSVVKDVANPNASCNQSDRDSRRVNTGPVLHNTSQLA 335
+E++ +K+ +++ E L + K + A + + N PV+ + +
Sbjct: 953 -SAELIAMEKRRLQKLEY--EYALKIQK-LKEARAL-----KAKEQQNIAPVVEEEPEFS 1003
Query: 336 NMTSSNFLKNAQERIESDPASTAAGCHPSSFLSNATREQNVMENSEYTK 384
+ + Q+++ D S SN R ++ +E++ +TK
Sbjct: 1004 -LPQPSLHDLTQDKLSLDTEENDVDDEILSG-SNRERRRSFLESNSFTK 1050
Score = 45 (20.9 bits), Expect = 1.1e-06, Sum P(6) = 1.1e-06
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 6 SGNNLSCTVD----IQPRNTTQSNSLKSFEQNRVTFKSNTPG 43
S +N+S T D + P TQ + ++FE + K PG
Sbjct: 266 STDNVSITKDPSKEVAPEEKTQVKTFQAFELKPLRQKLTLPG 307
Score = 41 (19.5 bits), Expect = 7.2e-06, Sum P(6) = 7.2e-06
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 441 AQEHRRICEIEERKALKAYR-KAQRAL 466
A E RR+ ++E ALK + K RAL
Sbjct: 958 AMEKRRLQKLEYEYALKIQKLKEARAL 984
Score = 39 (18.8 bits), Expect = 1.1e-06, Sum P(6) = 1.1e-06
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 1534 RN-FSKLKDLVDFVEGIMEIVPSNYQLAFS 1562
RN + K D V + VP+ Y + FS
Sbjct: 1795 RNKVQEFKFFTDLVNRCLVTVPARYPIPFS 1824
Score = 37 (18.1 bits), Expect = 1.6e-06, Sum P(6) = 1.6e-06
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 1416 RLLQNDWNE 1424
RLLQ++W E
Sbjct: 1871 RLLQHEWEE 1879
>UNIPROTKB|F6UU41 [details] [associations]
symbol:ZFC3H1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006396 "RNA processing" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR003107
InterPro:IPR013026 PROSITE:PS50293 SMART:SM00386 GO:GO:0005622
GO:GO:0006396 InterPro:IPR019607 Pfam:PF10650 CTD:196441
OMA:PKTLNFE GeneTree:ENSGT00390000001116 Ensembl:ENSCAFT00000000728
EMBL:AAEX03007066 RefSeq:XP_531679.3 GeneID:474449 KEGG:cfa:474449
Uniprot:F6UU41
Length = 1994
Score = 123 (48.4 bits), Expect = 1.1e-06, Sum P(6) = 1.1e-06
Identities = 68/331 (20%), Positives = 132/331 (39%)
Query: 993 FFRSRNGVLNKLKQVELSNEQCVEMALLI----LNQ-DANKLEGMKKALSLLSRALEADP 1047
+F + + L+ L N V++ L + LNQ D E + AL++L+RALE +
Sbjct: 1344 YFTNETDDIANLEASVLENPSHVQLWLKLAYKYLNQNDGLCSESLDSALNVLARALENNK 1403
Query: 1048 TSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYALWLMYINSRTPLNHRLDAYDAA 1107
+ +W YL +F +M +V++ + W +++ + + +
Sbjct: 1404 DNPEIWCHYLRLFSKRGTKEEVQEMCETAVEYAPDYQSFWT-FLHLESTFEEKDYVCERM 1462
Query: 1108 LSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTEKAIQRISRLLIPATGSNDRH 1167
+ L A D + S +L+ L +Q +G + A+ + L A G
Sbjct: 1463 VEFLMGAAKQEASDVL--SFQLLEALLFRVQLHIFTGRCQSALAVLQNALKSANGGI--- 1517
Query: 1168 SLFLSDILTCLTISDKLIFWVCCVYLVIYRKLPDAVLQLLECEK------ELFAIDWPPV 1221
+ L D+ + W+ ++L+ + LP E F + W V
Sbjct: 1518 ------VAEYLKTGDRCLAWLAYIHLIEFNVLPSKFYDPSNANPSRIVNTESFVMPWQAV 1571
Query: 1222 QLEDDEKQRAIKLIEMAVNSVELYSNGESLEKETNLRSAHCFAVNHIWCMAVLNGLECSM 1281
Q D K L+ + ++V+ ++ E+L E + N I +L E ++
Sbjct: 1572 Q---DVKTNPDMLLAVFEDAVKACTD-ENLTVEERVEVCVPLYTNMIALHQLLERYEAAV 1627
Query: 1282 NLLEKYIKLYP-SC--LE-LVLMKARLQKHD 1308
L ++ ++ P +C LE LV + + +HD
Sbjct: 1628 ELCKRLLETCPMNCQLLEALVALYLQTDQHD 1658
Score = 93 (37.8 bits), Expect = 1.1e-06, Sum P(6) = 1.1e-06
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 845 SYTCNLAIDPLWPLCMYELRGKCNNDECPWQHVKYFADRNKNLHDD 890
SY+ N+ I+P C ++L G CN+D+C WQH + + K L D
Sbjct: 1179 SYS-NM-IEPDQCFCRFDLTGTCNDDDCQWQHTQDYTLSRKQLFQD 1222
Score = 54 (24.1 bits), Expect = 1.1e-06, Sum P(6) = 1.1e-06
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 1626 RFFKRALSVYPFSIKLWK--CYYDLSKT-KGD-LNTIVKAAREKGIELD 1670
R ++RAL P LWK ++ S+ K D L +V +E G+ L+
Sbjct: 1931 RLYQRALQKLPLCASLWKDQLLFEASEGGKTDNLRKLVSKCQEIGVSLN 1979
Score = 50 (22.7 bits), Expect = 1.1e-06, Sum P(6) = 1.1e-06
Identities = 50/229 (21%), Positives = 100/229 (43%)
Query: 164 DQVGLRNSKLQDLRQQIALRESELKL-KAAQQNKDLV-IDSCENYHLGRLDQKEPDKKRL 221
D+ L+N Q+ +++ ++R +E K+ K +Q + I S L +L Q++ K +
Sbjct: 848 DESVLKNLVQQEAKKKESVRNAETKITKLTEQLQATEKILSVNRMFLKKL-QEQIHKVQQ 906
Query: 222 KVSGSYSHRLTTDGRQDIPATKSTVPVKEPTPERSSLQD--G-NKV---DRSQKDIPRSR 275
+V+ LT +++ K+ V KE +R QD G NK+ D S PR
Sbjct: 907 RVT--IKKALTLKYGEELARAKA-VASKE-IGKRKLEQDRLGPNKMMRLDNSPISSPRKH 962
Query: 276 IESEIVKWDKQNGKQVHVPPENVLSVVKDVANPNASCNQSDRDSRRVNTGPVLHNTSQLA 335
+E++ +K+ +++ E L + K + A + + N PV+ + +
Sbjct: 963 -SAELIAMEKRRLQKLEY--EYALKIQK-LKEARAL-----KAKEQQNIAPVVEEEPEFS 1013
Query: 336 NMTSSNFLKNAQERIESDPASTAAGCHPSSFLSNATREQNVMENSEYTK 384
+ + Q+++ D S SN R ++ +E++ +TK
Sbjct: 1014 -LPQPSLHDLTQDKLSLDTEENDVDDEILSG-SNRERRRSFLESNSFTK 1060
Score = 45 (20.9 bits), Expect = 1.1e-06, Sum P(6) = 1.1e-06
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 6 SGNNLSCTVD----IQPRNTTQSNSLKSFEQNRVTFKSNTPG 43
S +N+S T D + P TQ + ++FE + K PG
Sbjct: 276 STDNVSITKDPSKEVAPEEKTQVKTFQAFELKPLRQKLTLPG 317
Score = 41 (19.5 bits), Expect = 7.4e-06, Sum P(6) = 7.4e-06
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 441 AQEHRRICEIEERKALKAYR-KAQRAL 466
A E RR+ ++E ALK + K RAL
Sbjct: 968 AMEKRRLQKLEYEYALKIQKLKEARAL 994
Score = 39 (18.8 bits), Expect = 1.1e-06, Sum P(6) = 1.1e-06
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 1534 RN-FSKLKDLVDFVEGIMEIVPSNYQLAFS 1562
RN + K D V + VP+ Y + FS
Sbjct: 1805 RNKVQEFKFFTDLVNRCLVTVPARYPIPFS 1834
Score = 37 (18.1 bits), Expect = 1.7e-06, Sum P(6) = 1.7e-06
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 1416 RLLQNDWNE 1424
RLLQ++W E
Sbjct: 1881 RLLQHEWEE 1889
>UNIPROTKB|E1BIV7 [details] [associations]
symbol:LOC781886 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0006396 "RNA processing" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR003107 InterPro:IPR013026
PROSITE:PS50293 SMART:SM00386 GO:GO:0005622 GO:GO:0006396
InterPro:IPR019607 Pfam:PF10650 OMA:PKTLNFE EMBL:DAAA02012288
IPI:IPI00710308 RefSeq:XP_003586079.1 Ensembl:ENSBTAT00000030417
GeneID:781886 KEGG:bta:781886 GeneTree:ENSGT00390000001116
Uniprot:E1BIV7
Length = 1988
Score = 122 (48.0 bits), Expect = 2.5e-06, Sum P(6) = 2.5e-06
Identities = 79/395 (20%), Positives = 156/395 (39%)
Query: 993 FFRSRNGVLNKLKQVELSNEQCVEMALLI----LNQDANKL-EGMKKALSLLSRALEADP 1047
+F + + L+ L N V++ L + LNQ+ E + AL++L+RALE +
Sbjct: 1338 YFTNETDDIANLEASVLENPSHVQLWLKLAYKYLNQNEGLCSESLDSALNVLARALENNK 1397
Query: 1048 TSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYALWLMYINSRTPLNHRLDAYDAA 1107
+ +W YL +F +M +V++ + W +++ + + +
Sbjct: 1398 DNPEIWCHYLRLFSKRGTKEEVQEMCETAVEYAPDYQSFWT-FLHLESTFEEKDYVCERM 1456
Query: 1108 LSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTEKAIQRISRLLIPATGSNDRH 1167
+ L A D + S +L+ L +Q +G + A+ + L AT
Sbjct: 1457 VEFLMGAAKREASDTL--SFQLLEALLFRVQLHIFTGRCQSALAILQNALKLATDGR--- 1511
Query: 1168 SLFLSDILTCLTISDKLIFWVCCVYLVIYRKLPDAVLQLLECEK------ELFAIDWPPV 1221
+ L SD+ + W+ ++L+ + LP E F + W V
Sbjct: 1512 ------VAEYLKTSDRCLAWLAYIHLIEFNILPSKFYDPSNANPSRIVNIEPFVMPWQAV 1565
Query: 1222 QLEDDEKQRAIKLIEMAVNSVELYSNGESLEKETNLRSAHCFAVNHIWCMAVLNGLECSM 1281
Q D K L + ++V+ ++ ESL E + + N I +L E ++
Sbjct: 1566 Q---DVKTNPDMLFAVFEDAVKACTD-ESLTVEERVETCVPLYTNMIVLHQLLERYEAAV 1621
Query: 1282 NLLEKYIKLYP-SCLELVLMKARLQKHDFGDLSSVGFEEALIKWPKGVPGIQCIWNQYVE 1340
L + ++ P +C L + A K + D + + A K P+ + ++
Sbjct: 1622 ELCKCLLESCPMNCQLLESLAALYLKMNQQDKARAVWVTAFEKSPQNA---EVFYHTCKF 1678
Query: 1341 YALQNGRHDFAAELMDRWFHSVWKV---QYSQVEI 1372
+ LQN R D + ++ S +K +YS +++
Sbjct: 1679 FILQN-RGDNLLPFLRKFIASFFKPGFEKYSNLDL 1712
Score = 100 (40.3 bits), Expect = 2.5e-06, Sum P(6) = 2.5e-06
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 845 SYTCNLAIDPLWPLCMYELRGKCNNDECPWQHVKYFADRNKNLHDDSDS-----AGCQIG 899
SY+ N+ I+P C ++L G CN+D+C WQH + + K L D S GC G
Sbjct: 1173 SYS-NM-IEPDQCFCRFDLTGTCNDDDCQWQHTQDYTLSRKQLFQDVLSYNLSLIGCSEG 1230
Query: 900 ST 901
ST
Sbjct: 1231 ST 1232
Score = 54 (24.1 bits), Expect = 2.5e-06, Sum P(6) = 2.5e-06
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 1626 RFFKRALSVYPFSIKLWK--CYYDLSKT-KGD-LNTIVKAAREKGIELD 1670
R ++RAL P LWK ++ S+ K D L +V +E G+ L+
Sbjct: 1925 RLYQRALQKLPLCASLWKDQLLFEASEGGKTDNLRKLVSKCQEIGVSLN 1973
Score = 45 (20.9 bits), Expect = 2.5e-06, Sum P(6) = 2.5e-06
Identities = 48/229 (20%), Positives = 101/229 (44%)
Query: 164 DQVGLRNSKLQDLRQQIALRESELKL-KAAQQNKDLV-IDSCENYHLGRLDQKEPDKKRL 221
D+ L+N Q+ +++ ++R +E K+ K +Q + I S L +L Q++ + +
Sbjct: 842 DESVLKNLVQQEAKKKESVRNAETKITKLTEQLQATEKILSVNRMFLKKL-QEQIHRVQQ 900
Query: 222 KVSGSYSHRLTTDGRQDIPATKSTVPVKEPTPERSSLQD--G-NKV---DRSQKDIPRSR 275
+++ LT +++ K+ V KE +R QD G NK+ D S PR R
Sbjct: 901 RIT--IKKALTLKYGEELARAKA-VASKE-IGKRKLEQDRLGPNKMMRLDNSPISSPR-R 955
Query: 276 IESEIVKWDKQNGKQVHVPPENVLSVVKDVANPNASCNQSDRDSRRVNTGPVLHNTSQLA 335
+E++ +K+ +++ E L + K + A + + N P++ + +
Sbjct: 956 HSAELIAMEKRRLQKLEY--EYALKIQK-LKEARAL-----KAKEQQNIAPLVEEEPEFS 1007
Query: 336 NMTSSNFLKNAQERIESDPASTAAGCHPSSFLSNATREQNVMENSEYTK 384
+ + Q+++ D S SN R ++ +E++ +TK
Sbjct: 1008 -LPQPSLHDLTQDKLSLDTEENDVDDEILSG-SNRERRRSFLESNSFTK 1054
Score = 43 (20.2 bits), Expect = 3.9e-06, Sum P(6) = 3.9e-06
Identities = 19/75 (25%), Positives = 31/75 (41%)
Query: 553 DLQNFSHEHENGQNL-GSEPCSEQDASTSEL---LPRKSKNALNGISPQSNELMVSADEE 608
DL N ++ L G + S +S +L L +++ ++ GI N V+ D +
Sbjct: 476 DLSNQEEQYNRFMKLVGGKRRSRSKSSDPDLRRSLDKQATDSGGGIYQYDNYEEVAMDTD 535
Query: 609 EEACQLDLESVQPNF 623
E VQP F
Sbjct: 536 SETNSPAPSPVQPPF 550
Score = 41 (19.5 bits), Expect = 5.9e-06, Sum P(6) = 5.9e-06
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 441 AQEHRRICEIEERKALKAYR-KAQRAL 466
A E RR+ ++E ALK + K RAL
Sbjct: 962 AMEKRRLQKLEYEYALKIQKLKEARAL 988
Score = 40 (19.1 bits), Expect = 2.5e-06, Sum P(6) = 2.5e-06
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 15 DIQPRNTTQSNSLKSFEQNRVTFKSNTPG 43
++ P TQ + ++FE + K PG
Sbjct: 283 EVAPEEKTQVKTFQAFELKPLRQKLTLPG 311
Score = 39 (18.8 bits), Expect = 2.5e-06, Sum P(6) = 2.5e-06
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 1534 RN-FSKLKDLVDFVEGIMEIVPSNYQLAFS 1562
RN + K D V + VP+ Y + FS
Sbjct: 1799 RNKVQEFKFFTDLVNRCLVTVPARYPIPFS 1828
Score = 37 (18.1 bits), Expect = 3.9e-06, Sum P(6) = 3.9e-06
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 1416 RLLQNDWNE 1424
RLLQ++W E
Sbjct: 1875 RLLQHEWEE 1883
>UNIPROTKB|E9PTM2 [details] [associations]
symbol:E9PTM2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] InterPro:IPR003107
InterPro:IPR013026 PROSITE:PS50293 SMART:SM00386 GO:GO:0005622
GO:GO:0006396 InterPro:IPR019607 Pfam:PF10650
GeneTree:ENSGT00390000001116 IPI:IPI00776597
Ensembl:ENSRNOT00000005541 ArrayExpress:E9PTM2 Uniprot:E9PTM2
Length = 1993
Score = 107 (42.7 bits), Expect = 0.00019, Sum P(6) = 0.00019
Identities = 65/320 (20%), Positives = 121/320 (37%)
Query: 993 FFRSRNGVLNKLKQVELSNEQCVEMALLI----LNQDANKL-EGMKKALSLLSRALEADP 1047
+F S + L+ L N V++ L + LNQ+ E + AL++L+RALE +
Sbjct: 1343 YFTSETDDIANLEASVLENPSHVQLWLKLAYKYLNQNEGLCSESLDSALNVLARALENNK 1402
Query: 1048 TSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYALWLMYINSRTPLNHRLDAYDAA 1107
+ +W YL +F +M +V++ Y + +++ + + +
Sbjct: 1403 DNPEIWCHYLRLFSKRGTKEEVQEMCETAVEYAP-DYQSFCTFLHLESTFEEKDYVCERM 1461
Query: 1108 LSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTEKAIQRISRLLIPATGSNDRH 1167
+ L A D + S +L+ L +Q +G + A+ + L A ND
Sbjct: 1462 VEFLMGAAKRETSDIL--SFQLLEALLFRVQLHIFTGRCQSALAILQNALKLA---ND-- 1514
Query: 1168 SLFLSDILTCLTISDKLIFWVCCVYLVIYRKLPDAVLQLLECEK------ELFAIDWPPV 1221
+ + L D+ + W+ ++L+ + LP + E F + W
Sbjct: 1515 ----AIVAEYLRTEDRCLAWLAYIHLIEFNSLPSKLYDPSNANPSRIVNTEPFVMPWQAA 1570
Query: 1222 QLEDDEKQRAIKLIEMAVNSV--ELYSNGESLEK----ETNLRSAHCFAVNHI----WCM 1271
Q + + E AV + E ++GE E TN+ + H C
Sbjct: 1571 QDVKTNPDLLLAVFEDAVKACTDEALTSGERTEVCLPLYTNMMALHQLLERDEEAVELCK 1630
Query: 1272 AVLNGLECSMNLLEKYIKLY 1291
++L + LLE LY
Sbjct: 1631 SLLESCPTNCQLLETLAALY 1650
Score = 97 (39.2 bits), Expect = 0.00019, Sum P(6) = 0.00019
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 845 SYTCNLAIDPLWPLCMYELRGKCNNDECPWQHVKYFADRNKNLHDD 890
SY+ N+ I+P C ++L G CN+D+C WQHV+ + K L D
Sbjct: 1178 SYS-NM-IEPDQCFCRFDLAGTCNDDDCQWQHVQDYTLSRKQLFQD 1221
Score = 54 (24.1 bits), Expect = 0.00019, Sum P(6) = 0.00019
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 1626 RFFKRALSVYPFSIKLWK--CYYDLSKT-KGD-LNTIVKAAREKGIELD 1670
R ++RAL P LWK ++ S+ K D L +V +E G+ L+
Sbjct: 1930 RLYQRALQKLPLCASLWKDQLLFEASEGGKTDNLRKLVSKCQEIGVSLN 1978
Score = 43 (20.2 bits), Expect = 0.00019, Sum P(6) = 0.00019
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 164 DQVGLRNSKLQDLRQQIALRESELKL-KAAQQ 194
D+ L+N LQ+ +++ ++R +E K+ K +Q
Sbjct: 848 DESVLKNLVLQEAKKKESVRNAEAKITKLTEQ 879
Score = 40 (19.1 bits), Expect = 0.00019, Sum P(6) = 0.00019
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 5 ASGNNLSCTVDIQ----PRNTTQSNSLKSFEQNRVTFKSNTPG 43
A NN + T D P TQ + ++FE + K PG
Sbjct: 276 AGTNNANVTKDPSKEGAPEEKTQLKTFQAFELKPLRQKLTLPG 318
Score = 39 (18.8 bits), Expect = 0.00019, Sum P(6) = 0.00019
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 1534 RN-FSKLKDLVDFVEGIMEIVPSNYQLAFS 1562
RN + K D V + VP+ Y + FS
Sbjct: 1804 RNKVQEFKFFTDLVNRCLVTVPARYPIPFS 1833
Score = 38 (18.4 bits), Expect = 0.00024, Sum P(6) = 0.00024
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 1405 VMFGYLNLSLHRLLQNDWNE 1424
VM L+L RLLQ++W E
Sbjct: 1870 VMPANSRLAL-RLLQHEWEE 1888
Score = 38 (18.4 bits), Expect = 0.00055, Sum P(6) = 0.00055
Identities = 13/54 (24%), Positives = 28/54 (51%)
Query: 301 VVKDVANPNASCNQSDRDSRRVNTGPVLHNTSQLA--NMTSSNFLKNAQERIES 352
++K +AN A + + + PVL+N+ L+ N++ + +Q RI++
Sbjct: 637 LLKSLANKRAFKPEEASSNSDPPSPPVLNNSQPLSRSNLSIVSINTVSQPRIQN 690
>UNIPROTKB|F1MAP0 [details] [associations]
symbol:F1MAP0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] InterPro:IPR003107
InterPro:IPR013026 PROSITE:PS50293 SMART:SM00386 GO:GO:0005622
GO:GO:0006396 InterPro:IPR019607 Pfam:PF10650
GeneTree:ENSGT00390000001116 IPI:IPI00360186
Ensembl:ENSRNOT00000058444 ArrayExpress:F1MAP0 Uniprot:F1MAP0
Length = 1993
Score = 107 (42.7 bits), Expect = 0.00019, Sum P(6) = 0.00019
Identities = 65/320 (20%), Positives = 121/320 (37%)
Query: 993 FFRSRNGVLNKLKQVELSNEQCVEMALLI----LNQDANKL-EGMKKALSLLSRALEADP 1047
+F S + L+ L N V++ L + LNQ+ E + AL++L+RALE +
Sbjct: 1343 YFTSETDDIANLEASVLENPSHVQLWLKLAYKYLNQNEGLCSESLDSALNVLARALENNK 1402
Query: 1048 TSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYALWLMYINSRTPLNHRLDAYDAA 1107
+ +W YL +F +M +V++ Y + +++ + + +
Sbjct: 1403 DNPEIWCHYLRLFSKRGTKEEVQEMCETAVEYAP-DYQSFCTFLHLESTFEEKDYVCERM 1461
Query: 1108 LSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTEKAIQRISRLLIPATGSNDRH 1167
+ L A D + S +L+ L +Q +G + A+ + L A ND
Sbjct: 1462 VEFLMGAAKRETSDIL--SFQLLEALLFRVQLHIFTGRCQSALAILQNALKLA---ND-- 1514
Query: 1168 SLFLSDILTCLTISDKLIFWVCCVYLVIYRKLPDAVLQLLECEK------ELFAIDWPPV 1221
+ + L D+ + W+ ++L+ + LP + E F + W
Sbjct: 1515 ----AIVAEYLRTEDRCLAWLAYIHLIEFNSLPSKLYDPSNANPSRIVNTEPFVMPWQAA 1570
Query: 1222 QLEDDEKQRAIKLIEMAVNSV--ELYSNGESLEK----ETNLRSAHCFAVNHI----WCM 1271
Q + + E AV + E ++GE E TN+ + H C
Sbjct: 1571 QDVKTNPDLLLAVFEDAVKACTDEALTSGERTEVCLPLYTNMMALHQLLERDEEAVELCK 1630
Query: 1272 AVLNGLECSMNLLEKYIKLY 1291
++L + LLE LY
Sbjct: 1631 SLLESCPTNCQLLETLAALY 1650
Score = 97 (39.2 bits), Expect = 0.00019, Sum P(6) = 0.00019
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 845 SYTCNLAIDPLWPLCMYELRGKCNNDECPWQHVKYFADRNKNLHDD 890
SY+ N+ I+P C ++L G CN+D+C WQHV+ + K L D
Sbjct: 1178 SYS-NM-IEPDQCFCRFDLAGTCNDDDCQWQHVQDYTLSRKQLFQD 1221
Score = 54 (24.1 bits), Expect = 0.00019, Sum P(6) = 0.00019
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 1626 RFFKRALSVYPFSIKLWK--CYYDLSKT-KGD-LNTIVKAAREKGIELD 1670
R ++RAL P LWK ++ S+ K D L +V +E G+ L+
Sbjct: 1930 RLYQRALQKLPLCASLWKDQLLFEASEGGKTDNLRKLVSKCQEIGVSLN 1978
Score = 43 (20.2 bits), Expect = 0.00019, Sum P(6) = 0.00019
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 164 DQVGLRNSKLQDLRQQIALRESELKL-KAAQQ 194
D+ L+N LQ+ +++ ++R +E K+ K +Q
Sbjct: 848 DESVLKNLVLQEAKKKESVRNAEAKITKLTEQ 879
Score = 40 (19.1 bits), Expect = 0.00019, Sum P(6) = 0.00019
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 5 ASGNNLSCTVDIQ----PRNTTQSNSLKSFEQNRVTFKSNTPG 43
A NN + T D P TQ + ++FE + K PG
Sbjct: 276 AGTNNANVTKDPSKEGAPEEKTQLKTFQAFELKPLRQKLTLPG 318
Score = 39 (18.8 bits), Expect = 0.00019, Sum P(6) = 0.00019
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 1534 RN-FSKLKDLVDFVEGIMEIVPSNYQLAFS 1562
RN + K D V + VP+ Y + FS
Sbjct: 1804 RNKVQEFKFFTDLVNRCLVTVPARYPIPFS 1833
Score = 38 (18.4 bits), Expect = 0.00024, Sum P(6) = 0.00024
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 1405 VMFGYLNLSLHRLLQNDWNE 1424
VM L+L RLLQ++W E
Sbjct: 1870 VMPANSRLAL-RLLQHEWEE 1888
Score = 38 (18.4 bits), Expect = 0.00055, Sum P(6) = 0.00055
Identities = 13/54 (24%), Positives = 28/54 (51%)
Query: 301 VVKDVANPNASCNQSDRDSRRVNTGPVLHNTSQLA--NMTSSNFLKNAQERIES 352
++K +AN A + + + PVL+N+ L+ N++ + +Q RI++
Sbjct: 637 LLKSLANKRAFKPEEASSNSDPPSPPVLNNSQPLSRSNLSIVSINTVSQPRIQN 690
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1670 1611 0.00083 125 3 11 22 0.42 34
40 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 629 (67 KB)
Total size of DFA: 714 KB (2307 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 156.25u 0.14s 156.39t Elapsed: 00:00:07
Total cpu time: 156.26u 0.14s 156.40t Elapsed: 00:00:07
Start: Fri May 10 23:33:12 2013 End: Fri May 10 23:33:19 2013