Query         000330
Match_columns 1652
No_of_seqs    117 out of 119
Neff          3.8 
Searched_HMMs 13730
Date          Tue Mar 26 18:05:17 2013
Command       hhsearch -i /local_scratch/syshi/lefta3m/000330.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_107-111//hhsearch_scop/000330hhsearch_scop 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1w3ba_ a.118.8.1 (A:) O-GlcNA  99.9   7E-21 5.1E-25  153.9  27.4  363  997-1435    3-384 (388)
  2 d1w3ba_ a.118.8.1 (A:) O-GlcNA  99.8 5.9E-16 4.3E-20  121.0  25.3   89 1036-1140    3-95  (388)
  3 d2onda1 a.118.8.7 (A:242-549)   99.6 3.6E-13 2.6E-17  102.4  23.0  264  992-1349    7-276 (308)
  4 d1fcha_ a.118.8.1 (A:) Peroxin  99.6 1.2E-13 8.8E-18  105.6  20.1  248  992-1421   18-273 (323)
  5 d1fcha_ a.118.8.1 (A:) Peroxin  99.5 4.8E-12 3.5E-16   94.9  21.6   77  986-1067   46-122 (323)
  6 d2onda1 a.118.8.7 (A:242-549)   99.5 3.2E-10 2.3E-14   82.7  26.2  256 1031-1421    7-274 (308)
  7 d2h6fa1 a.118.6.1 (A:55-369) P  99.4 3.9E-11 2.8E-15   88.8  20.3  134  986-1140   36-174 (315)
  8 d1dcea1 a.118.6.1 (A:1-241,A:3  99.3 2.4E-11 1.7E-15   90.3  13.9  257 1015-1324   46-320 (334)
  9 d1dcea1 a.118.6.1 (A:1-241,A:3  99.3 3.3E-10 2.4E-14   82.6  18.9  131  987-1133   57-199 (334)
 10 d1hz4a_ a.118.8.2 (A:) Transcr  99.1 1.9E-08 1.4E-12   70.9  20.0  101 1287-1421  224-324 (366)
 11 d1xnfa_ a.118.8.1 (A:) Lipopro  99.1 7.2E-09 5.2E-13   73.7  17.2  112 1012-1139   13-132 (259)
 12 d1hz4a_ a.118.8.2 (A:) Transcr  99.1 1.5E-07 1.1E-11   64.9  23.8  290  985-1341    4-318 (366)
 13 d1xnfa_ a.118.8.1 (A:) Lipopro  99.1 9.6E-09   7E-13   72.8  16.4  123  990-1133   34-160 (259)
 14 d2h6fa1 a.118.6.1 (A:55-369) P  99.0   1E-07 7.6E-12   65.9  17.8  218 1025-1314   36-257 (315)
 15 d1a17a_ a.118.8.1 (A:) Protein  98.9   3E-08 2.2E-12   69.5  13.6  121  997-1133    7-135 (159)
 16 d1hh8a_ a.118.8.1 (A:) Neutrop  98.7 1.3E-06 9.1E-11   58.7  15.7  119 1011-1140   18-148 (192)
 17 d1elwa_ a.118.8.1 (A:) Hop {Hu  98.7 2.6E-07 1.9E-11   63.3  11.9   97 1010-1122   15-115 (117)
 18 d2c2la1 a.118.8.1 (A:24-224) S  98.6 7.8E-08 5.7E-12   66.8   6.7   83 1010-1100   16-102 (201)
 19 d1hxia_ a.118.8.1 (A:) Peroxin  98.4 1.4E-06 1.1E-10   58.3  10.6   91  993-1096   16-110 (112)
 20 d1hh8a_ a.118.8.1 (A:) Neutrop  98.4 7.9E-06 5.7E-10   53.4  13.0   78 1256-1341   18-97  (192)
 21 d1qqea_ a.118.8.1 (A:) Vesicul  98.2 8.3E-06   6E-10   53.2  10.4  115 1015-1139   54-185 (290)
 22 d1ihga1 a.118.8.1 (A:197-365)   98.2 1.2E-05 8.4E-10   52.3  11.1  118  990-1123   17-156 (169)
 23 d1hxia_ a.118.8.1 (A:) Peroxin  98.2 8.5E-06 6.2E-10   53.1  10.4   91 1033-1139   17-111 (112)
 24 d1p5qa1 a.118.8.1 (A:258-427)   98.2 5.5E-05   4E-09   47.7  14.1  113  996-1139    9-123 (170)
 25 d2c2la1 a.118.8.1 (A:24-224) S  98.2 3.6E-05 2.6E-09   49.0  12.6   95 1030-1140    2-100 (201)
 26 d1elra_ a.118.8.1 (A:) Hop {Hu  98.1 6.4E-06 4.6E-10   54.0   8.7   86 1009-1103   15-111 (128)
 27 d1zu2a1 a.118.8.1 (A:1-145) Mi  98.1 2.7E-05 1.9E-09   49.8  10.7   94 1010-1104    9-119 (145)
 28 d1elwa_ a.118.8.1 (A:) Hop {Hu  98.0 2.5E-05 1.8E-09   50.0  10.1   77  989-1070   33-109 (117)
 29 d1zbpa1 e.61.1.1 (A:2-265) Hyp  98.0 7.4E-06 5.4E-10   53.6   7.2  184 1010-1207    8-195 (264)
 30 d1nzna_ a.118.8.1 (A:) Mitocho  97.9 5.7E-05 4.1E-09   47.6  10.4   86 1010-1104   11-105 (122)
 31 d1kt1a1 a.118.8.1 (A:254-421)   97.9 0.00024 1.8E-08   43.4  13.6  115 1009-1139   26-160 (168)
 32 d1ya0a1 a.118.8.1 (A:1-497) SM  97.9 1.5E-05 1.1E-09   51.5   6.9  217 1015-1324    3-230 (497)
 33 d1a17a_ a.118.8.1 (A:) Protein  97.9 7.1E-05 5.2E-09   47.0  10.2   87 1038-1140   16-106 (159)
 34 d2fbna1 a.118.8.1 (A:22-174) P  97.8 0.00024 1.7E-08   43.5  11.9   19 1012-1030   31-49  (153)
 35 d1ya0a1 a.118.8.1 (A:1-497) SM  97.8 4.9E-05 3.6E-09   48.1   7.6  114 1011-1140   99-214 (497)
 36 d1qqea_ a.118.8.1 (A:) Vesicul  97.7 0.00024 1.7E-08   43.5  10.9  121  991-1135    2-141 (290)
 37 d1ihga1 a.118.8.1 (A:197-365)   97.7  0.0002 1.4E-08   44.0   9.9   75  989-1068   73-147 (169)
 38 d1zu2a1 a.118.8.1 (A:1-145) Mi  97.7 0.00011 8.2E-09   45.6   8.3  103  985-1098   23-141 (145)
 39 d1p5qa1 a.118.8.1 (A:258-427)   97.6 0.00024 1.7E-08   43.5   8.8   68  995-1067   64-131 (170)
 40 d2fbna1 a.118.8.1 (A:22-174) P  97.6 0.00031 2.2E-08   42.8   9.3   53 1015-1067   84-136 (153)
 41 d1nzna_ a.118.8.1 (A:) Mitocho  97.5 0.00023 1.7E-08   43.6   7.3   38 1390-1431   76-113 (122)
 42 d1kt1a1 a.118.8.1 (A:254-421)   97.4 0.00069   5E-08   40.4   9.0   61 1250-1311   71-133 (168)
 43 d1elra_ a.118.8.1 (A:) Hop {Hu  97.2  0.0018 1.3E-07   37.7   9.7   93 1034-1135    6-102 (128)
 44 d2hr2a1 a.118.8.8 (A:2-157) Hy  97.1 0.00085 6.2E-08   39.8   7.3   53 1009-1061   20-84  (156)
 45 d1tjca_ a.118.8.1 (A:) Prolyl   96.8    0.01 7.6E-07   32.5  10.7   84 1317-1435    8-91  (95)
 46 d2ff4a2 a.118.8.3 (A:105-283)   96.7   0.015 1.1E-06   31.4  11.1  117  994-1139   12-128 (179)
 47 d1zbpa1 e.61.1.1 (A:2-265) Hyp  96.4   0.012 9.1E-07   32.0   8.9  130 1255-1429    8-138 (264)
 48 d1tjca_ a.118.8.1 (A:) Prolyl   96.2   0.012 8.7E-07   32.1   7.9   73  991-1068    3-82  (95)
 49 d2pqrb1 a.118.8.1 (B:5-128) Mi  96.2   0.013 9.6E-07   31.8   7.9   77  990-1068   32-109 (124)
 50 d2ff4a2 a.118.8.3 (A:105-283)   96.2   0.031 2.3E-06   29.4  11.6   24 1316-1339   69-92  (179)
 51 d2hr2a1 a.118.8.8 (A:2-157) Hy  94.6     0.1 7.4E-06   25.9   9.7   25 1113-1137  101-125 (156)
 52 d1ouva_ a.118.18.1 (A:) Cystei  86.6    0.65 4.7E-05   20.5  22.8   95  994-1099    3-103 (265)
 53 d1klxa_ a.118.18.1 (A:) Cystei  79.7     1.2 8.9E-05   18.7  11.3  104 1012-1133    7-116 (133)
 54 d2cqea1 g.66.1.1 (A:458-513) Z  38.8     3.1 0.00023   16.0   0.1   19  841-859     3-23  (56)

No 1  
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90  E-value=7e-21  Score=153.91  Aligned_cols=363  Identities=13%  Similarity=0.044  Sum_probs=247.0

Q ss_pred             HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH----HHHHH
Q ss_conf             99999873003554455999999999999829999899999999997288971289999999850998899----99999
Q 000330          997 VEMALLILNQDANKLEGMKKALSLLSRALEADPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYA----LWLMY 1072 (1652)
Q Consensus       997 LelAl~~Lnq~~n~~g~ydAALdLLsrALEINPtSaelWy~Ll~lY~~~~~~eea~emlekAVelnP~NY~----LwlmY 1072 (1652)
                      |++|..++.     .|+|+.|...|..+++.+|+++.+|+.++.+|...+..+++.+.|++|++.+|.+..    ++..|
T Consensus         3 l~la~~~~~-----~G~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l~~~~   77 (388)
T d1w3ba_           3 MELAHREYQ-----AGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVY   77 (388)
T ss_dssp             CTHHHHHHH-----HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred             HHHHHHHHH-----CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             999999998-----699999999999999868998999999999999869999999999999985999899999999996


Q ss_pred             HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCH
Q ss_conf             83589766412359999999998620399993012120379999999998770689999999996305224999964230
Q 000330         1073 INSRTPLNHRLDAYDAALSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTEKAIQRISRLLIPATGSNDRHSLF 1152 (1652)
Q Consensus      1073 Insr~slddrl~~YdkAI~vLe~las~~~~Dr~~~Sa~iLDILL~LvqLY~qSGnydKAI~tl~rLEq~Al~g~sE~~lS 1152 (1652)
                      ...+        .|++|+..+....... +..       .+........+...+.+..+.........  ...... ...
T Consensus        78 ~~~g--------~~~~A~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~  138 (388)
T d1w3ba_          78 KERG--------QLQEAIEHYRHALRLK-PDF-------IDGYINLAAALVAAGDMEGAVQAYVSALQ--YNPDLY-CVR  138 (388)
T ss_dssp             HHHT--------CHHHHHHHHHHHHHHC-TTC-------HHHHHHHHHHHHHHSCSSHHHHHHHHHHH--HCTTCT-HHH
T ss_pred             HHHC--------CCCCCCCCCCCCCCCC-CCC-------CCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCC-CCC
T ss_conf             4200--------0222222222121122-222-------22222222222222222222222111222--222222-222


Q ss_pred             HHHHHHHHCCCCCCHHHHHHHH-------HHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             8999986412773205688889-------998501606798620112332216899865531237889999999998886
Q 000330         1153 LSDILTCLTISDKLIFWVCCVY-------LVIYRKLPDAVLQLLECEKELFAIDWPPVQLEDDEKQRAIKLIEMAVNSVE 1225 (1652)
Q Consensus      1153 LsKi~~YLt~sDKc~AWL~~iY-------llrYrvLPGdiy~q~e~~KEAl~I~W~y~~vlkdEPdnalAL~smA~dYY~ 1225 (1652)
                      ......+........+.....-       .......+|..+...+..++|...   +.+.++.+|+++.++..+| ..|.
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~---~~~al~~~p~~~~~~~~l~-~~~~  214 (388)
T d1w3ba_         139 SDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHH---FEKAVTLDPNFLDAYINLG-NVLK  214 (388)
T ss_dssp             HHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHH---HHHHHHHCTTCHHHHHHHH-HHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHH---HHHHHHHCCCCHHHHHHHH-HHHH
T ss_conf             22222221100013567888874025861068998636301024719999999---9999984946499999971-5522


Q ss_pred             HHCCCCCHHHHHHHCHHH------HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHH--HHHHHHHHHCCCCCCCHH
Q ss_conf             302884023433110136------867789999997139799999999999939984148--989999851026875099
Q 000330         1226 LYSNGESLEKETNLRSAH------CFAVNHIWCMAVLNGLECSMNLLEKYIKLYPSCLEL--VLMKARLQKHDFGDLSSV 1297 (1652)
Q Consensus      1226 ~~~ndEsla~~~~~kt~~------~tKLN~Ir~lI~LEDse~A~~LfdklLk~~P~dveL--~L~AAyL~~K~m~~~Ais 1297 (1652)
                      . .++-+.+.....+...      ..-.++...+...++.+.|+..|.++++..|.+++.  .+...+...++ ..+|+.
T Consensus       215 ~-~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~-~~~A~~  292 (388)
T d1w3ba_         215 E-ARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGS-VAEAED  292 (388)
T ss_dssp             T-TTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSC-HHHHHH
T ss_pred             C-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC-HHHHHH
T ss_conf             0-05299999999985777554799999999999987899999999999998499989999999999997487-999999


Q ss_pred             HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf             99999982999983378999999999997399479999999999965010256111201110268999999999998522
Q 000330         1298 GFEEALIKWPKGVPGIQCIWNQYVEYALQNGRHDFAAELMDRWFHSVWKVQYSQVEISDPLVADMSHSSPESTSTSDPEF 1377 (1652)
Q Consensus      1298 vle~AL~~~PkNa~g~~caW~QLIq~al~~~n~d~ai~L~~~ff~gia~~Q~~~deALDaLrkgns~i~~es~s~~vSDf 1377 (1652)
                      .|+.++...|.+..    .|..+.......++++.|+...++.+                 .     +.++     ..+.
T Consensus       293 ~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~A~~~~~~al-----------------~-----~~p~-----~~~~  341 (388)
T d1w3ba_         293 CYNTALRLCPTHAD----SLNNLANIKREQGNIEEAVRLYRKAL-----------------E-----VFPE-----FAAA  341 (388)
T ss_dssp             HHHHHHHHCTTCHH----HHHHHHHHHHTTTCHHHHHHHHHHHT-----------------T-----SCTT-----CHHH
T ss_pred             HHHHHHCCCCCCCH----HHHHHHHHHHHCCCHHHHHHHHHHHH-----------------H-----HCCC-----CHHH
T ss_conf             99865404873001----01579999998789999999999999-----------------8-----6889-----8999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf             2233221135779999999985204989999999999711027708999999898881
Q 000330         1378 SVSNRNQMDVMFGYLNLSLHRLLQNDWNEARLAIDAALKAAASEHFKHCVREHAMLLL 1435 (1652)
Q Consensus      1378 y~~~~~q~d~~falLGD~Lyq~Lqg~~~EAfaAYDKALkanp~N~~i~cLNNYAYFLS 1435 (1652)
                      +           ..+|.+|+.  .|++++|..+|++||+.+|++  ..++.+.+.-+.
T Consensus       342 ~-----------~~la~~~~~--~g~~~~A~~~~~~al~l~P~~--~~a~~~lg~~~~  384 (388)
T d1w3ba_         342 H-----------SNLASVLQQ--QGKLQEALMHYKEAIRISPTF--ADAYSNMGNTLK  384 (388)
T ss_dssp             H-----------HHHHHHHHT--TTCCHHHHHHHHHHHTTCTTC--HHHHHHHHHHHH
T ss_pred             H-----------HHHHHHHHH--CCCHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHH
T ss_conf             9-----------999999998--599999999999999709998--999999999999


No 2  
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78  E-value=5.9e-16  Score=121.01  Aligned_cols=89  Identities=9%  Similarity=0.042  Sum_probs=79.6

Q ss_pred             HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH----HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf             99999997288971289999999850998899----99999835897664123599999999986203999930121203
Q 000330         1036 ITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYA----LWLMYINSRTPLNHRLDAYDAALSVLCRCASASDGDEMHASACI 1111 (1652)
Q Consensus      1036 y~Ll~lY~~~~~~eea~emlekAVelnP~NY~----LwlmYInsr~slddrl~~YdkAI~vLe~las~~~~Dr~~~Sa~i 1111 (1652)
                      +.++..+++.|+-.++...|+++++.+|.+..    ++..|...+        .|++|+..|.++.+.+ |+.       
T Consensus         3 l~la~~~~~~G~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~--------~~~~A~~~~~~al~~~-p~~-------   66 (388)
T d1w3ba_           3 MELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCR--------RLDRSAHFSTLAIKQN-PLL-------   66 (388)
T ss_dssp             CTHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC-TTC-------
T ss_pred             HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC--------CHHHHHHHHHHHHHHC-CCC-------
T ss_conf             999999998699999999999999868998999999999999869--------9999999999999859-998-------


Q ss_pred             HHHHHHHHHHHHHHCCHHHHHHHHHHHCC
Q ss_conf             79999999998770689999999996305
Q 000330         1112 LDLFLQMLQCFCMSGNTEKAIQRISRLLI 1140 (1652)
Q Consensus      1112 LDILL~LvqLY~qSGnydKAI~tl~rLEq 1140 (1652)
                      .+++..+..+|...|++++|+..+.....
T Consensus        67 ~~a~~~l~~~~~~~g~~~~A~~~~~~~~~   95 (388)
T d1w3ba_          67 AEAYSNLGNVYKERGQLQEAIEHYRHALR   95 (388)
T ss_dssp             HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf             99999999996420002222222221211


No 3  
>d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.63  E-value=3.6e-13  Score=102.42  Aligned_cols=264  Identities=13%  Similarity=0.078  Sum_probs=158.3

Q ss_pred             CHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHH
Q ss_conf             08999999998730035---544559999999999998299998999999999972889712899999998509988999
Q 000330          992 SNEQCVEMALLILNQDA---NKLEGMKKALSLLSRALEADPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYAL 1068 (1652)
Q Consensus       992 d~elWLelAl~~Lnq~~---n~~g~ydAALdLLsrALEINPtSaelWy~Ll~lY~~~~~~eea~emlekAVelnP~NY~L 1068 (1652)
                      ..++|++++..--....   ......+.+..+|.+||...|.++++|+.|+.+.-..++         ...+..      
T Consensus         7 ~~~~W~~yi~~E~~~~~~~~~~~~~~~Rv~~vyerAl~~~~~~~~lW~~y~~~~~~~~~---------~~~~~~------   71 (308)
T d2onda1           7 QVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSK---------LLAEKG------   71 (308)
T ss_dssp             HHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH---------HHHHTS------
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC---------HHHHHH------
T ss_conf             99999999999876865433220369999999999998777999999999999987073---------688777------


Q ss_pred             HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             99998358976641235999999999862039999301212037999999999877068999999999630522499996
Q 000330         1069 WLMYINSRTPLNHRLDAYDAALSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTEKAIQRISRLLIPATGSNDR 1148 (1652)
Q Consensus      1069 wlmYInsr~slddrl~~YdkAI~vLe~las~~~~Dr~~~Sa~iLDILL~LvqLY~qSGnydKAI~tl~rLEq~Al~g~sE 1148 (1652)
                       .+.....        .+++|+.+|+++...++|..       ..+|+..+.++...|+++.|+..+.+++.     ..+
T Consensus        72 -~~~~~~~--------~~~~a~~i~~ral~~~~p~~-------~~l~~~ya~~~~~~~~~~~a~~i~~~~l~-----~~~  130 (308)
T d2onda1          72 -DMNNAKL--------FSDEAANIYERAISTLLKKN-------MLLYFAYADYEESRMKYEKVHSIYNRLLA-----IED  130 (308)
T ss_dssp             -CCHHHHH--------HHHHHHHHHHHHHTTTTTTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHT-----SSS
T ss_pred             -HHHHCCC--------CHHHHHHHHHHHHHHCCCCC-------HHHHHHHHHHHHHCCCHHHHHHHHHHHHH-----HHC
T ss_conf             -8763102--------45999999999998749987-------99999999999861338999999999998-----715


Q ss_pred             CCCHHHHHHHHHCCCCCCHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             42308999986412773205688889-99850160679862011233221689986553123788999999999888630
Q 000330         1149 HSLFLSDILTCLTISDKLIFWVCCVY-LVIYRKLPDAVLQLLECEKELFAIDWPPVQLEDDEKQRAIKLIEMAVNSVELY 1227 (1652)
Q Consensus      1149 ~~lSLsKi~~YLt~sDKc~AWL~~iY-llrYrvLPGdiy~q~e~~KEAl~I~W~y~~vlkdEPdnalAL~smA~dYY~~~ 1227 (1652)
                                    .+...+|+.++. ..+.+..                             +.+..++..|.....  
T Consensus       131 --------------~~~~~~w~~~~~~~~~~~~~-----------------------------~~ar~i~~~al~~~~--  165 (308)
T d2onda1         131 --------------IDPTLVYIQYMKFARRAEGI-----------------------------KSGRMIFKKAREDAR--  165 (308)
T ss_dssp             --------------SCTHHHHHHHHHHHHHHHCH-----------------------------HHHHHHHHHHHTSTT--
T ss_pred             --------------CCHHHHHHHHHHHHHHCCCH-----------------------------HHHHHHHHHHHHHCC--
T ss_conf             --------------78699999999999982786-----------------------------889999999998088--


Q ss_pred             CCCCCHHHHHHHCHHHHHHHHHHHHH-HHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC-CCCCHHHHHHHHHH
Q ss_conf             28840234331101368677899999-97139799999999999939984148989999851026-87509999999982
Q 000330         1228 SNGESLEKETNLRSAHCFAVNHIWCM-AVLNGLECSMNLLEKYIKLYPSCLELVLMKARLQKHDF-GDLSSVGFEEALIK 1305 (1652)
Q Consensus      1228 ~ndEsla~~~~~kt~~~tKLN~Ir~l-I~LEDse~A~~LfdklLk~~P~dveL~L~AAyL~~K~m-~~~Aisvle~AL~~ 1305 (1652)
                                  .....+ +...... ....+.+.++.+|.++++.+|.++++|+..+.+....+ .+.++.+|++++..
T Consensus       166 ------------~~~~~~-~~~a~~e~~~~~~~~~a~~i~e~~l~~~p~~~~~w~~y~~~~~~~g~~~~aR~~fe~ai~~  232 (308)
T d2onda1         166 ------------TRHHVY-VTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTS  232 (308)
T ss_dssp             ------------CCTHHH-HHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHS
T ss_pred             ------------CCHHHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf             ------------867999-9999999876557789999999999861003889999999999869868999999999982


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf             99998337899999999999739947999999999996501025
Q 000330         1306 WPKGVPGIQCIWNQYVEYALQNGRHDFAAELMDRWFHSVWKVQY 1349 (1652)
Q Consensus      1306 ~PkNa~g~~caW~QLIq~al~~~n~d~ai~L~~~ff~gia~~Q~ 1349 (1652)
                      +|.+..-..-+|..+++++...|+.+.+..+-++....++....
T Consensus       233 ~~~~~~~~~~iw~~~~~fE~~~G~~~~~~~~~~r~~~~~~~~~~  276 (308)
T d2onda1         233 GSLPPEKSGEIWARFLAFESNIGDLASILKVEKRRFTAFREEYE  276 (308)
T ss_dssp             SSSCGGGCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTTTTS
T ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC
T ss_conf             78986899999999999999849999999999999987711022


No 4  
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62  E-value=1.2e-13  Score=105.59  Aligned_cols=248  Identities=14%  Similarity=0.061  Sum_probs=143.8

Q ss_pred             CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH----
Q ss_conf             0899999999873003554455999999999999829999899999999997288971289999999850998899----
Q 000330          992 SNEQCVEMALLILNQDANKLEGMKKALSLLSRALEADPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYA---- 1067 (1652)
Q Consensus       992 d~elWLelAl~~Lnq~~n~~g~ydAALdLLsrALEINPtSaelWy~Ll~lY~~~~~~eea~emlekAVelnP~NY~---- 1067 (1652)
                      +.+.+++.|..++..+     +++.|...|.++|+.+|+++.+|+.++.+|...+....+..+|.+|++.+|.+..    
T Consensus        18 ~~~~~~~~g~~~~~~g-----~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~   92 (323)
T d1fcha_          18 DHPQPFEEGLRRLQEG-----DLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMA   92 (323)
T ss_dssp             TCSSHHHHHHHHHHTT-----CHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred             CHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf             5399999999999859-----99999999999998689989999999999998377588999998510022222222222


Q ss_pred             HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC
Q ss_conf             99999835897664123599999999986203999930121203799999999987706899999999963052249999
Q 000330         1068 LWLMYINSRTPLNHRLDAYDAALSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTEKAIQRISRLLIPATGSND 1147 (1652)
Q Consensus      1068 LwlmYInsr~slddrl~~YdkAI~vLe~las~~~~Dr~~~Sa~iLDILL~LvqLY~qSGnydKAI~tl~rLEq~Al~g~s 1147 (1652)
                      ++..|.+.+        .++.|+..|.+..... ++.       ..++..                             .
T Consensus        93 la~~~~~~~--------~~~~A~~~~~~~~~~~-~~~-------~~~~~~-----------------------------~  127 (323)
T d1fcha_          93 LAVSFTNES--------LQRQACEILRDWLRYT-PAY-------AHLVTP-----------------------------A  127 (323)
T ss_dssp             HHHHHHHTT--------CHHHHHHHHHHHHHTS-TTT-------GGGCC-------------------------------
T ss_pred             CCCCCCCCC--------CCCCCCCCHHHHHHHC-CCH-------HHHHHH-----------------------------H
T ss_conf             222222222--------1121110002677736-106-------788876-----------------------------6


Q ss_pred             CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             64230899998641277320568888999850160679862011233221689986553123788999999999888630
Q 000330         1148 RHSLFLSDILTCLTISDKLIFWVCCVYLVIYRKLPDAVLQLLECEKELFAIDWPPVQLEDDEKQRAIKLIEMAVNSVELY 1227 (1652)
Q Consensus      1148 E~~lSLsKi~~YLt~sDKc~AWL~~iYllrYrvLPGdiy~q~e~~KEAl~I~W~y~~vlkdEPdnalAL~smA~dYY~~~ 1227 (1652)
                      .                                                               .......+  ..+.  
T Consensus       128 ~---------------------------------------------------------------~~~~~~~~--~~~~--  140 (323)
T d1fcha_         128 E---------------------------------------------------------------EGAGGAGL--GPSK--  140 (323)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             H---------------------------------------------------------------HHHHHCCC--CCCH--
T ss_conf             4---------------------------------------------------------------00000001--0000--


Q ss_pred             CCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHH--HH--HHHHHHHCCCCCCCHHHHHHHH
Q ss_conf             2884023433110136867789999997139799999999999939984148--98--9999851026875099999999
Q 000330         1228 SNGESLEKETNLRSAHCFAVNHIWCMAVLNGLECSMNLLEKYIKLYPSCLEL--VL--MKARLQKHDFGDLSSVGFEEAL 1303 (1652)
Q Consensus      1228 ~ndEsla~~~~~kt~~~tKLN~Ir~lI~LEDse~A~~LfdklLk~~P~dveL--~L--~AAyL~~K~m~~~Aisvle~AL 1303 (1652)
                                  +.        +..+........+...|.++++..|...+.  +.  ...++..++ .++|+..|+.++
T Consensus       141 ------------~~--------~~~~~~~~~~~~a~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~-~~~A~~~~~~al  199 (323)
T d1fcha_         141 ------------RI--------LGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGE-YDKAVDCFTAAL  199 (323)
T ss_dssp             ------------CT--------THHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTC-HHHHHHHHHHHH
T ss_pred             ------------HH--------HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH-HHHHHCCCCCCC
T ss_conf             ------------14--------788887657999999999999971301222111036888888887-755002111222


Q ss_pred             HHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             82999983378999999999997399479999999999965010256111201110268999999999998522223322
Q 000330         1304 IKWPKGVPGIQCIWNQYVEYALQNGRHDFAAELMDRWFHSVWKVQYSQVEISDPLVADMSHSSPESTSTSDPEFSVSNRN 1383 (1652)
Q Consensus      1304 ~~~PkNa~g~~caW~QLIq~al~~~n~d~ai~L~~~ff~gia~~Q~~~deALDaLrkgns~i~~es~s~~vSDfy~~~~~ 1383 (1652)
                      ...|++..    +|..+.......++++.|+..+.+.+.-               .    |.        ..+.+     
T Consensus       200 ~~~p~~~~----~~~~lg~~~~~~g~~~~A~~~~~~al~~---------------~----p~--------~~~a~-----  243 (323)
T d1fcha_         200 SVRPNDYL----LWNKLGATLANGNQSEEAVAAYRRALEL---------------Q----PG--------YIRSR-----  243 (323)
T ss_dssp             HHCTTCHH----HHHHHHHHHHHTTCHHHHHHHHHHHHHH---------------C----TT--------CHHHH-----
T ss_pred             CCCCCCCC----CHHHHHHCCCCCCCCHHHHHHHHHHHHH---------------H----HC--------CHHHH-----
T ss_conf             22222211----1013330122111101378887789988---------------4----32--------49999-----


Q ss_pred             CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
Q ss_conf             11357799999999852049899999999997110277
Q 000330         1384 QMDVMFGYLNLSLHRLLQNDWNEARLAIDAALKAAASE 1421 (1652)
Q Consensus      1384 q~d~~falLGD~Lyq~Lqg~~~EAfaAYDKALkanp~N 1421 (1652)
                            -.||.+++.  .|++++|...|++||..+|.+
T Consensus       244 ------~~lg~~~~~--~g~~~~A~~~~~~al~l~p~~  273 (323)
T d1fcha_         244 ------YNLGISCIN--LGAHREAVEHFLEALNMQRKS  273 (323)
T ss_dssp             ------HHHHHHHHH--HTCHHHHHHHHHHHHHHHHTC
T ss_pred             ------HHHHHHHHH--CCCHHHHHHHHHHHHHHCCCC
T ss_conf             ------999999998--789999999999999709757


No 5  
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53  E-value=4.8e-12  Score=94.89  Aligned_cols=77  Identities=13%  Similarity=0.091  Sum_probs=57.6

Q ss_pred             HHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
Q ss_conf             21000108999999998730035544559999999999998299998999999999972889712899999998509988
Q 000330          986 LKQVELSNEQCVEMALLILNQDANKLEGMKKALSLLSRALEADPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGS 1065 (1652)
Q Consensus       986 le~~~~d~elWLelAl~~Lnq~~n~~g~ydAALdLLsrALEINPtSaelWy~Ll~lY~~~~~~eea~emlekAVelnP~N 1065 (1652)
                      |+..|.+.+.|..+|..+...+     +++.|+..|.+|++++|+++.+|+.++.+|...+...++.+++++++...|..
T Consensus        46 l~~~P~~~~a~~~lg~~~~~~~-----~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~  120 (323)
T d1fcha_          46 VQQDPKHMEAWQYLGTTQAENE-----QELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAY  120 (323)
T ss_dssp             HHSCTTCHHHHHHHHHHHHHTT-----CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTT
T ss_pred             HHHCCCCHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCH
T ss_conf             9868998999999999999837-----75889999985100222222222222222222221121110002677736106


Q ss_pred             HH
Q ss_conf             99
Q 000330         1066 YA 1067 (1652)
Q Consensus      1066 Y~ 1067 (1652)
                      ..
T Consensus       121 ~~  122 (323)
T d1fcha_         121 AH  122 (323)
T ss_dssp             GG
T ss_pred             HH
T ss_conf             78


No 6  
>d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.46  E-value=3.2e-10  Score=82.71  Aligned_cols=256  Identities=12%  Similarity=0.049  Sum_probs=150.0

Q ss_pred             CHHHHHHHHHHHHHCCCCC--------HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf             9899999999997288971--------28999999985099889999999835897664123599999999986203999
Q 000330         1031 SEILWITYLLIFYSNTNSV--------GKDDMFSYSVKHNEGSYALWLMYINSRTPLNHRLDAYDAALSVLCRCASASDG 1102 (1652)
Q Consensus      1031 SaelWy~Ll~lY~~~~~~e--------ea~emlekAVelnP~NY~LwlmYInsr~slddrl~~YdkAI~vLe~las~~~~ 1102 (1652)
                      ...+|..|+.+....+...        .+...|++|+...|.+..||.+|+.-.          ..-...+   .. . .
T Consensus         7 ~~~~W~~yi~~E~~~~~~~~~~~~~~~Rv~~vyerAl~~~~~~~~lW~~y~~~~----------~~~~~~~---~~-~-~   71 (308)
T d2onda1           7 QVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQYL----------EQSSKLL---AE-K-G   71 (308)
T ss_dssp             HHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH----------HHHHHHH---HH-T-S
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH----------HHCCCHH---HH-H-H
T ss_conf             999999999998768654332203699999999999987779999999999999----------8707368---87-7-7


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf             93012120379999999998770689999999996305224999964230899998641277320568888999850160
Q 000330         1103 DEMHASACILDLFLQMLQCFCMSGNTEKAIQRISRLLIPATGSNDRHSLFLSDILTCLTISDKLIFWVCCVYLVIYRKLP 1182 (1652)
Q Consensus      1103 Dr~~~Sa~iLDILL~LvqLY~qSGnydKAI~tl~rLEq~Al~g~sE~~lSLsKi~~YLt~sDKc~AWL~~iYllrYrvLP 1182 (1652)
                      +.                 ....+.+++|...+.|-..    ...|+               ....|+.+.....-+   
T Consensus        72 ~~-----------------~~~~~~~~~a~~i~~ral~----~~~p~---------------~~~l~~~ya~~~~~~---  112 (308)
T d2onda1          72 DM-----------------NNAKLFSDEAANIYERAIS----TLLKK---------------NMLLYFAYADYEESR---  112 (308)
T ss_dssp             CC-----------------HHHHHHHHHHHHHHHHHHT----TTTTT---------------CHHHHHHHHHHHHHT---
T ss_pred             HH-----------------HHCCCCHHHHHHHHHHHHH----HCCCC---------------CHHHHHHHHHHHHHC---
T ss_conf             87-----------------6310245999999999998----74998---------------799999999999861---


Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf             67986201123322168998655312378899999999988863028840234331101368677899999971397999
Q 000330         1183 DAVLQLLECEKELFAIDWPPVQLEDDEKQRAIKLIEMAVNSVELYSNGESLEKETNLRSAHCFAVNHIWCMAVLNGLECS 1262 (1652)
Q Consensus      1183 Gdiy~q~e~~KEAl~I~W~y~~vlkdEPdnalAL~smA~dYY~~~~ndEsla~~~~~kt~~~tKLN~Ir~lI~LEDse~A 1262 (1652)
                             +                  +.+.+..++.-+.   ..  .         ++.....-+.++......++.+.+
T Consensus       113 -------~------------------~~~~a~~i~~~~l---~~--~---------~~~~~~~w~~~~~~~~~~~~~~~a  153 (308)
T d2onda1         113 -------M------------------KYEKVHSIYNRLL---AI--E---------DIDPTLVYIQYMKFARRAEGIKSG  153 (308)
T ss_dssp             -------T------------------CHHHHHHHHHHHH---TS--S---------SSCTHHHHHHHHHHHHHHHCHHHH
T ss_pred             -------C------------------CHHHHHHHHHHHH---HH--H---------CCCHHHHHHHHHHHHHHCCCHHHH
T ss_conf             -------3------------------3899999999999---87--1---------578699999999999982786889


Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHCC--CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf             9999999993998414898999985102--68750999999998299998337899999999999739947999999999
Q 000330         1263 MNLLEKYIKLYPSCLELVLMKARLQKHD--FGDLSSVGFEEALIKWPKGVPGIQCIWNQYVEYALQNGRHDFAAELMDRW 1340 (1652)
Q Consensus      1263 ~~LfdklLk~~P~dveL~L~AAyL~~K~--m~~~Aisvle~AL~~~PkNa~g~~caW~QLIq~al~~~n~d~ai~L~~~f 1340 (1652)
                      +.+|.++++.+|.+..+++..+.+....  ..+.|+.+|+.++...|++..    .|+.|+.+.+..++.+.|..+.++.
T Consensus       154 r~i~~~al~~~~~~~~~~~~~a~~e~~~~~~~~~a~~i~e~~l~~~p~~~~----~w~~y~~~~~~~g~~~~aR~~fe~a  229 (308)
T d2onda1         154 RMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPE----YVLAYIDYLSHLNEDNNTRVLFERV  229 (308)
T ss_dssp             HHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHH----HHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf             999999998088867999999999987655778999999999986100388----9999999999869868999999999


Q ss_pred             HHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH--HHHHHHHCCHHHHHHHHHHHHHHC
Q ss_conf             996501025611120111026899999999999852222332211357799999--999852049899999999997110
Q 000330         1341 FHSVWKVQYSQVEISDPLVADMSHSSPESTSTSDPEFSVSNRNQMDVMFGYLNL--SLHRLLQNDWNEARLAIDAALKAA 1418 (1652)
Q Consensus      1341 f~gia~~Q~~~deALDaLrkgns~i~~es~s~~vSDfy~~~~~q~d~~falLGD--~Lyq~Lqg~~~EAfaAYDKALkan 1418 (1652)
                      +..++                   .++        +-.           ..+|+  +.+.-.+|+...+...++++.+..
T Consensus       230 i~~~~-------------------~~~--------~~~-----------~~iw~~~~~fE~~~G~~~~~~~~~~r~~~~~  271 (308)
T d2onda1         230 LTSGS-------------------LPP--------EKS-----------GEIWARFLAFESNIGDLASILKVEKRRFTAF  271 (308)
T ss_dssp             HHSSS-------------------SCG--------GGC-----------HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHT
T ss_pred             HHHCC-------------------CCH--------HHH-----------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
T ss_conf             98278-------------------986--------899-----------9999999999998499999999999999877


Q ss_pred             CCC
Q ss_conf             277
Q 000330         1419 ASE 1421 (1652)
Q Consensus      1419 p~N 1421 (1652)
                      |..
T Consensus       272 ~~~  274 (308)
T d2onda1         272 REE  274 (308)
T ss_dssp             TTT
T ss_pred             CCC
T ss_conf             110


No 7  
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44  E-value=3.9e-11  Score=88.85  Aligned_cols=134  Identities=9%  Similarity=0.095  Sum_probs=111.8

Q ss_pred             HHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC-CHHHHHHHHHHHHCCC
Q ss_conf             210001089999999987300355445599999999999982999989999999999728897-1289999999850998
Q 000330          986 LKQVELSNEQCVEMALLILNQDANKLEGMKKALSLLSRALEADPTSEILWITYLLIFYSNTNS-VGKDDMFSYSVKHNEG 1064 (1652)
Q Consensus       986 le~~~~d~elWLelAl~~Lnq~~n~~g~ydAALdLLsrALEINPtSaelWy~Ll~lY~~~~~~-eea~emlekAVelnP~ 1064 (1652)
                      |.-.|.-.+++--++..+..++.     ++.|+.++.+||++||....+|+..+.++...+.+ +++...+++|++.+|.
T Consensus        36 I~~~p~~~~a~~~~~~~~~~~e~-----~~~Al~~~~~ai~lnP~~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~  110 (315)
T d2h6fa1          36 IIYSDKFRDVYDYFRAVLQRDER-----SERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK  110 (315)
T ss_dssp             ECCCHHHHHHHHHHHHHHHHTCC-----CHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCC-----HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf             22697799999999999995886-----6999999999998798876999999999998376799999999999988774


Q ss_pred             CHH----HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
Q ss_conf             899----9999983589766412359999999998620399993012120379999999998770689999999996305
Q 000330         1065 SYA----LWLMYINSRTPLNHRLDAYDAALSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTEKAIQRISRLLI 1140 (1652)
Q Consensus      1065 NY~----LwlmYInsr~slddrl~~YdkAI~vLe~las~~~~Dr~~~Sa~iLDILL~LvqLY~qSGnydKAI~tl~rLEq 1140 (1652)
                      +++    +++.|...+        .|++|+..|.++.... |..       .++|..+..++...|+++.|+..+++...
T Consensus       111 ~~~a~~~~~~~~~~l~--------~~~eAl~~~~kal~~d-p~n-------~~a~~~~~~~~~~~~~~~~Al~~~~~al~  174 (315)
T d2h6fa1         111 NYQVWHHRRVLVEWLR--------DPSQELEFIADILNQD-AKN-------YHAWQHRQWVIQEFKLWDNELQYVDQLLK  174 (315)
T ss_dssp             CHHHHHHHHHHHHHHT--------CCTTHHHHHHHHHHHC-TTC-------HHHHHHHHHHHHHHTCCTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHC--------CHHHHHHHHHHHHHHH-HCC-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             2268988758888505--------3788998875554321-004-------68899887788888866789999999998


No 8  
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.34  E-value=2.4e-11  Score=90.29  Aligned_cols=257  Identities=13%  Similarity=0.042  Sum_probs=159.4

Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC----------CCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHH
Q ss_conf             999999999998299998999999999972889----------7128999999985099889999999835897664123
Q 000330         1015 KKALSLLSRALEADPTSEILWITYLLIFYSNTN----------SVGKDDMFSYSVKHNEGSYALWLMYINSRTPLNHRLD 1084 (1652)
Q Consensus      1015 dAALdLLsrALEINPtSaelWy~Ll~lY~~~~~----------~eea~emlekAVelnP~NY~LwlmYInsr~slddrl~ 1084 (1652)
                      +.|+.++.++|++||...++|.....++.....          -.++..+|++|++.+|.++.+|......-..++ + .
T Consensus        46 ~~al~~~~~~l~~~P~~~~a~~~r~~~l~~l~~~~~~~~~~~~~~~al~~~~~~l~~~pk~~~~~~~~~~~~~~~~-~-~  123 (334)
T d1dcea1          46 ESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLP-E-P  123 (334)
T ss_dssp             HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCS-S-C
T ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC-C-C
T ss_conf             9999999999998878589999999999997650034778778999999999999868886798988648998843-0-4


Q ss_pred             HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH-HHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf             599999999986203999930121203799999-9999877068999999999630522499996423089999864127
Q 000330         1085 AYDAALSVLCRCASASDGDEMHASACILDLFLQ-MLQCFCMSGNTEKAIQRISRLLIPATGSNDRHSLFLSDILTCLTIS 1163 (1652)
Q Consensus      1085 ~YdkAI~vLe~las~~~~Dr~~~Sa~iLDILL~-LvqLY~qSGnydKAI~tl~rLEq~Al~g~sE~~lSLsKi~~YLt~s 1163 (1652)
                      ++++|+..+.++...+ +..       .+.+.. +..++...+.+++|+..+.+...     .+|.              
T Consensus       124 ~~~~a~~~~~~al~~~-~~~-------~~~~~~~~~~~~~~~~~~~~Al~~~~~~i~-----~~p~--------------  176 (334)
T d1dcea1         124 NWARELELCARFLEAD-ERN-------FHCWDYRRFVAAQAAVAPAEELAFTDSLIT-----RNFS--------------  176 (334)
T ss_dssp             CHHHHHHHHHHHHHHC-TTC-------HHHHHHHHHHHHHTCCCHHHHHHHHHTTTT-----TTCC--------------
T ss_pred             CHHHHHHHHHHHHHHC-CHH-------HHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-----CCCC--------------
T ss_conf             2899999999998559-212-------111105789998744552899999999887-----1898--------------


Q ss_pred             CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHH-
Q ss_conf             7320568888999850160679862011233221689986553123788999999999888630288402343311013-
Q 000330         1164 DKLIFWVCCVYLVIYRKLPDAVLQLLECEKELFAIDWPPVQLEDDEKQRAIKLIEMAVNSVELYSNGESLEKETNLRSA- 1242 (1652)
Q Consensus      1164 DKc~AWL~~iYllrYrvLPGdiy~q~e~~KEAl~I~W~y~~vlkdEPdnalAL~smA~dYY~~~~ndEsla~~~~~kt~- 1242 (1652)
                      +- .+|         . .+|.+|...+...+|...   +...++..|...-....    +....-.+++...-  .+.. 
T Consensus       177 ~~-~a~---------~-~l~~~~~~~~~~~~A~~~---~~~~~~~~~~~~~~~~~----~~~l~~~~~a~~~~--~~~l~  236 (334)
T d1dcea1         177 NY-SSW---------H-YRSCLLPQLHPQPDSGPQ---GRLPENVLLKELELVQN----AFFTDPNDQSAWFY--HRWLL  236 (334)
T ss_dssp             CH-HHH---------H-HHHHHHHHHSCCCCSSSC---CSSCHHHHHHHHHHHHH----HHHHCSSCSHHHHH--HHHHH
T ss_pred             CH-HHH---------H-HHHHHHHHHCCHHHHHHH---HHHHHHHHHHHHHHHHH----HHHHCCHHHHHHHH--HHHHH
T ss_conf             79-999---------9-999999982688989998---87767768999999999----98824414889999--98877


Q ss_pred             -----HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHH-HHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHH
Q ss_conf             -----686778999999713979999999999993998414898-99998510268750999999998299998337899
Q 000330         1243 -----HCFAVNHIWCMAVLNGLECSMNLLEKYIKLYPSCLELVL-MKARLQKHDFGDLSSVGFEEALIKWPKGVPGIQCI 1316 (1652)
Q Consensus      1243 -----~~tKLN~Ir~lI~LEDse~A~~LfdklLk~~P~dveL~L-~AAyL~~K~m~~~Aisvle~AL~~~PkNa~g~~ca 1316 (1652)
                           ...-.+....+...++..++...|.++++..|.+...+. .+..+...+..++|+..|++|+.++|++..    .
T Consensus       237 ~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~eA~~~~~~ai~ldP~~~~----y  312 (334)
T d1dcea1         237 GRAEPLFRCELSVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAA----Y  312 (334)
T ss_dssp             SCCCCSSSCCCCHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHH----H
T ss_pred             HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHH----H
T ss_conf             186605678879999999866999999999887629137999999999998789999999999999987966399----9


Q ss_pred             HHHHHHHH
Q ss_conf             99999999
Q 000330         1317 WNQYVEYA 1324 (1652)
Q Consensus      1317 W~QLIq~a 1324 (1652)
                      |..|....
T Consensus       313 ~~~L~~~~  320 (334)
T d1dcea1         313 LDDLRSKF  320 (334)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
T ss_conf             99999998


No 9  
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.32  E-value=3.3e-10  Score=82.60  Aligned_cols=131  Identities=8%  Similarity=-0.019  Sum_probs=72.4

Q ss_pred             HHCCCCHHHHHHHHHHHHCCC-----CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC--CHHHHHHHHHH
Q ss_conf             100010899999999873003-----55445599999999999982999989999999999728897--12899999998
Q 000330          987 KQVELSNEQCVEMALLILNQD-----ANKLEGMKKALSLLSRALEADPTSEILWITYLLIFYSNTNS--VGKDDMFSYSV 1059 (1652)
Q Consensus       987 e~~~~d~elWLelAl~~Lnq~-----~n~~g~ydAALdLLsrALEINPtSaelWy~Ll~lY~~~~~~--eea~emlekAV 1059 (1652)
                      +..|.+...|......+....     ....+.++.|+..+..+|+++|.+..+|+.++..+...+..  .++...+++|+
T Consensus        57 ~~~P~~~~a~~~r~~~l~~l~~~~~~~~~~~~~~~al~~~~~~l~~~pk~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al  136 (334)
T d1dcea1          57 GANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFL  136 (334)
T ss_dssp             HHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHH
T ss_pred             HHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf             98878589999999999997650034778778999999999999868886798988648998843042899999999998


Q ss_pred             HHCCCCHH-----HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf             50998899-----999998358976641235999999999862039999301212037999999999877068999999
Q 000330         1060 KHNEGSYA-----LWLMYINSRTPLNHRLDAYDAALSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTEKAIQ 1133 (1652)
Q Consensus      1060 elnP~NY~-----LwlmYInsr~slddrl~~YdkAI~vLe~las~~~~Dr~~~Sa~iLDILL~LvqLY~qSGnydKAI~ 1133 (1652)
                      +.+|.++.     +|..|...+        .++.|+..+..+...+ |..       .+.|..+..+|...|++++|+.
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~Al~~~~~~i~~~-p~~-------~~a~~~l~~~~~~~~~~~~A~~  199 (334)
T d1dcea1         137 EADERNFHCWDYRRFVAAQAAV--------APAEELAFTDSLITRN-FSN-------YSSWHYRSCLLPQLHPQPDSGP  199 (334)
T ss_dssp             HHCTTCHHHHHHHHHHHHHTCC--------CHHHHHHHHHTTTTTT-CCC-------HHHHHHHHHHHHHHSCCCCSSS
T ss_pred             HHCCHHHHHHHHHHHHHHHHCC--------CCHHHHHHHHHHHHCC-CCC-------HHHHHHHHHHHHHHCCHHHHHH
T ss_conf             5592121111057899987445--------5289999999988718-987-------9999999999998268898999


No 10 
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]}
Probab=99.13  E-value=1.9e-08  Score=70.92  Aligned_cols=101  Identities=13%  Similarity=-0.035  Sum_probs=69.1

Q ss_pred             HHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCC
Q ss_conf             51026875099999999829999833789999999999973994799999999999650102561112011102689999
Q 000330         1287 QKHDFGDLSSVGFEEALIKWPKGVPGIQCIWNQYVEYALQNGRHDFAAELMDRWFHSVWKVQYSQVEISDPLVADMSHSS 1366 (1652)
Q Consensus      1287 ~~K~m~~~Aisvle~AL~~~PkNa~g~~caW~QLIq~al~~~n~d~ai~L~~~ff~gia~~Q~~~deALDaLrkgns~i~ 1366 (1652)
                      ...+....+...++.++...|.+.......|..+....+..++++.++...++....              .+....+. 
T Consensus       224 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~--------------~~~~~~~~-  288 (366)
T d1hz4a_         224 QMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNEN--------------ARSLRLMS-  288 (366)
T ss_dssp             HHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------------HHHTTCHH-
T ss_pred             HHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH--------------HHHCCCCH-
T ss_conf             860448989999999997622466677788999999998758799999999999988--------------76426674-


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
Q ss_conf             9999999852222332211357799999999852049899999999997110277
Q 000330         1367 PESTSTSDPEFSVSNRNQMDVMFGYLNLSLHRLLQNDWNEARLAIDAALKAAASE 1421 (1652)
Q Consensus      1367 ~es~s~~vSDfy~~~~~q~d~~falLGD~Lyq~Lqg~~~EAfaAYDKALkanp~N 1421 (1652)
                            ...+.+           ..+|.+|+.  .|+.++|...|++||...+..
T Consensus       289 ------~~~~~~-----------~~la~~~~~--~g~~~~A~~~l~~Al~l~~~~  324 (366)
T d1hz4a_         289 ------DLNRNL-----------LLLNQLYWQ--AGRKSDAQRVLLDALKLANRT  324 (366)
T ss_dssp             ------HHHHHH-----------HHHHHHHHH--HTCHHHHHHHHHHHHHHHHHH
T ss_pred             ------HHHHHH-----------HHHHHHHHH--CCCHHHHHHHHHHHHHHHHHC
T ss_conf             ------799999-----------999999998--789999999999999976531


No 11 
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]}
Probab=99.11  E-value=7.2e-09  Score=73.69  Aligned_cols=112  Identities=13%  Similarity=0.044  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHHHHHHH----CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH----HHHHHHHCCCCCCCCH
Q ss_conf             5599999999999982----9999899999999997288971289999999850998899----9999983589766412
Q 000330         1012 EGMKKALSLLSRALEA----DPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYA----LWLMYINSRTPLNHRL 1083 (1652)
Q Consensus      1012 g~ydAALdLLsrALEI----NPtSaelWy~Ll~lY~~~~~~eea~emlekAVelnP~NY~----LwlmYInsr~slddrl 1083 (1652)
                      ..++.|+..+..+|..    +|..+.+||.++.+|...+..+++.+.|++|++++|++..    ++..|...+       
T Consensus        13 ~~~e~al~~~~e~l~~~~~~~~~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~~~~a~~~lg~~~~~~g-------   85 (259)
T d1xnfa_          13 LQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAG-------   85 (259)
T ss_dssp             HHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTT-------
T ss_pred             HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHH-------
T ss_conf             7999999999999876336999999999999999998799999999999854349998899960042788877-------


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
Q ss_conf             35999999999862039999301212037999999999877068999999999630
Q 000330         1084 DAYDAALSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTEKAIQRISRLL 1139 (1652)
Q Consensus      1084 ~~YdkAI~vLe~las~~~~Dr~~~Sa~iLDILL~LvqLY~qSGnydKAI~tl~rLE 1139 (1652)
                       .|++|+..|.++.... |+.       .++++.+..+|...|++++|+..+.+..
T Consensus        86 -~~~~A~~~~~~al~~~-p~~-------~~a~~~lg~~~~~~g~~~~A~~~~~~al  132 (259)
T d1xnfa_          86 -NFDAAYEAFDSVLELD-PTY-------NYAHLNRGIALYYGGRDKLAQDDLLAFY  132 (259)
T ss_dssp             -CHHHHHHHHHHHHHHC-TTC-------THHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHHHHH-HHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             -7887523446899987-611-------1158889999998766799999999998


No 12 
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]}
Probab=99.11  E-value=1.5e-07  Score=64.86  Aligned_cols=290  Identities=9%  Similarity=-0.052  Sum_probs=167.0

Q ss_pred             HHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC-----HHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf             22100010899999999873003554455999999999999829999-----8999999999972889712899999998
Q 000330          985 KLKQVELSNEQCVEMALLILNQDANKLEGMKKALSLLSRALEADPTS-----EILWITYLLIFYSNTNSVGKDDMFSYSV 1059 (1652)
Q Consensus       985 ~le~~~~d~elWLelAl~~Lnq~~n~~g~ydAALdLLsrALEINPtS-----aelWy~Ll~lY~~~~~~eea~emlekAV 1059 (1652)
                      .|.+.+...+...-.|...+.++     +++.|+.++..+|+.+|.+     ..++..++.+|...|...++..+|++|+
T Consensus         4 ~~~~~~~~ae~~~lrA~~~~~~g-----~~~~A~~~~~~aL~~~~~~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~   78 (366)
T d1hz4a_           4 DIREDTMHAEFNALRAQVAINDG-----NPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTE   78 (366)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTT-----CHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred             HCCCCCHHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf             30566213999999999999888-----9999999999998548689967999999999999998799999999999999


Q ss_pred             HHCCCC---HH-------HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf             509988---99-------99999835897664123599999999986203999930121203799999999987706899
Q 000330         1060 KHNEGS---YA-------LWLMYINSRTPLNHRLDAYDAALSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTE 1129 (1652)
Q Consensus      1060 elnP~N---Y~-------LwlmYInsr~slddrl~~YdkAI~vLe~las~~~~Dr~~~Sa~iLDILL~LvqLY~qSGnyd 1129 (1652)
                      +..+..   ..       ++..|...+        .+..|+..+....................+...+..+|...|+++
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~a~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~  150 (366)
T d1hz4a_          79 QMARQHDVWHYALWSLIQQSEILFAQG--------FLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLD  150 (366)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHH
T ss_pred             HHHHHHCCHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf             998750114899999988878878888--------899999889999998675034125678889988878999814566


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf             99999996305224999964230899998641277320568888999850160679862011233221689986553123
Q 000330         1130 KAIQRISRLLIPATGSNDRHSLFLSDILTCLTISDKLIFWVCCVYLVIYRKLPDAVLQLLECEKELFAIDWPPVQLEDDE 1209 (1652)
Q Consensus      1130 KAI~tl~rLEq~Al~g~sE~~lSLsKi~~YLt~sDKc~AWL~~iYllrYrvLPGdiy~q~e~~KEAl~I~W~y~~vlkdE 1209 (1652)
                      .++..+..........                 ++...+.. ...       .+.++...+                  +
T Consensus       151 ~a~~~~~~~~~~~~~~-----------------~~~~~~~~-~~~-------~~~~~~~~~------------------~  187 (366)
T d1hz4a_         151 EAEASARSGIEVLSSY-----------------QPQQQLQC-LAM-------LIQCSLARG------------------D  187 (366)
T ss_dssp             HHHHHHHHHHHHTTTS-----------------CGGGGHHH-HHH-------HHHHHHHHT------------------C
T ss_pred             HHHHHHHHHHHHHHHH-----------------HHHHHHHH-HHH-------HHHHHHHHH------------------H
T ss_conf             6689999988876630-----------------02468999-988-------888887646------------------6


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHH--HHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHH------HH
Q ss_conf             78899999999988863028840234331101368677--89999997139799999999999939984148------98
Q 000330         1210 KQRAIKLIEMAVNSVELYSNGESLEKETNLRSAHCFAV--NHIWCMAVLNGLECSMNLLEKYIKLYPSCLEL------VL 1281 (1652)
Q Consensus      1210 PdnalAL~smA~dYY~~~~ndEsla~~~~~kt~~~tKL--N~Ir~lI~LEDse~A~~LfdklLk~~P~dveL------~L 1281 (1652)
                      ...+...+..+...+.. .+.         .......+  .....+...++.+.+...+.+.++..|.+...      .+
T Consensus       188 ~~~a~~~~~~a~~~~~~-~~~---------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~l  257 (366)
T d1hz4a_         188 LDNARSQLNRLENLLGN-GKY---------HSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNI  257 (366)
T ss_dssp             HHHHHHHHHHHHHHHTT-SCC---------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH-HCC---------CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_conf             78888999999999987-311---------57269999999999998604489899999999976224666777889999


Q ss_pred             HHHHHHHCCCCCCCHHHHHHHHHHCC--CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf             99998510268750999999998299--9983378999999999997399479999999999
Q 000330         1282 MKARLQKHDFGDLSSVGFEEALIKWP--KGVPGIQCIWNQYVEYALQNGRHDFAAELMDRWF 1341 (1652)
Q Consensus      1282 ~AAyL~~K~m~~~Aisvle~AL~~~P--kNa~g~~caW~QLIq~al~~~n~d~ai~L~~~ff 1341 (1652)
                      ..+|+..++ ...+...|+.++....  ...+....+|..+....++.+++++|+..+++.+
T Consensus       258 a~~~~~~g~-~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~Al  318 (366)
T d1hz4a_         258 ARAQILLGE-FEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDAL  318 (366)
T ss_dssp             HHHHHHTTC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred             HHHHHHCCC-HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf             999987587-9999999999998876426674799999999999998789999999999999


No 13 
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]}
Probab=99.07  E-value=9.6e-09  Score=72.85  Aligned_cols=123  Identities=11%  Similarity=-0.086  Sum_probs=96.2

Q ss_pred             CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH--
Q ss_conf             010899999999873003554455999999999999829999899999999997288971289999999850998899--
Q 000330          990 ELSNEQCVEMALLILNQDANKLEGMKKALSLLSRALEADPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYA-- 1067 (1652)
Q Consensus       990 ~~d~elWLelAl~~Lnq~~n~~g~ydAALdLLsrALEINPtSaelWy~Ll~lY~~~~~~eea~emlekAVelnP~NY~-- 1067 (1652)
                      +...+.|..++..+...     |+++.|+..|.++|+++|+.+.+|+.++.+|..+++..++.++|++|++++|.+..  
T Consensus        34 ~~~a~~~~~~G~~y~~~-----g~~~~A~~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~  108 (259)
T d1xnfa_          34 DERAQLLYERGVLYDSL-----GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAH  108 (259)
T ss_dssp             HHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHH
T ss_pred             HHHHHHHHHHHHHHHHC-----CCHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999987-----9999999999985434999889996004278887778875234468999876111158


Q ss_pred             --HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf             --999998358976641235999999999862039999301212037999999999877068999999
Q 000330         1068 --LWLMYINSRTPLNHRLDAYDAALSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTEKAIQ 1133 (1652)
Q Consensus      1068 --LwlmYInsr~slddrl~~YdkAI~vLe~las~~~~Dr~~~Sa~iLDILL~LvqLY~qSGnydKAI~ 1133 (1652)
                        ++..|...+        .++.|+..+.......+.+        ......+.-.+...+..+.+..
T Consensus       109 ~~lg~~~~~~g--------~~~~A~~~~~~al~~~p~~--------~~~~~~~~~~~~~~~~~~~~~~  160 (259)
T d1xnfa_         109 LNRGIALYYGG--------RDKLAQDDLLAFYQDDPND--------PFRSLWLYLAEQKLDEKQAKEV  160 (259)
T ss_dssp             HHHHHHHHHTT--------CHHHHHHHHHHHHHHCTTC--------HHHHHHHHHHHHHHCHHHHHHH
T ss_pred             HHHHHHHHHHH--------HHHHHHHHHHHHHHHCCCC--------HHHHHHHHHHHHHHHHHHHHHH
T ss_conf             88999999876--------6799999999998653000--------7888999999988535878999


No 14 
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.95  E-value=1e-07  Score=65.92  Aligned_cols=218  Identities=9%  Similarity=0.027  Sum_probs=144.2

Q ss_pred             HHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHH----HHHHCCCCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf             9829999899999999997288971289999999850998899999----998358976641235999999999862039
Q 000330         1025 LEADPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYALWL----MYINSRTPLNHRLDAYDAALSVLCRCASAS 1100 (1652)
Q Consensus      1025 LEINPtSaelWy~Ll~lY~~~~~~eea~emlekAVelnP~NY~Lwl----mYInsr~slddrl~~YdkAI~vLe~las~~ 1100 (1652)
                      +..+|.-++++..++.++.+.+..+++.+.+++|++++|.++..|.    .+...+    .   .|++|+..+......+
T Consensus        36 I~~~p~~~~a~~~~~~~~~~~e~~~~Al~~~~~ai~lnP~~~~a~~~r~~~l~~l~----~---~~~eal~~~~~al~~~  108 (315)
T d2h6fa1          36 IIYSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQ----K---DLHEEMNYITAIIEEQ  108 (315)
T ss_dssp             ECCCHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT----C---CHHHHHHHHHHHHHHC
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC----C---CHHHHHHHHHHHHHHH
T ss_conf             22697799999999999995886699999999999879887699999999999837----6---7999999999999887


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
Q ss_conf             99930121203799999999987706899999999963052249999642308999986412773205688889998501
Q 000330         1101 DGDEMHASACILDLFLQMLQCFCMSGNTEKAIQRISRLLIPATGSNDRHSLFLSDILTCLTISDKLIFWVCCVYLVIYRK 1180 (1652)
Q Consensus      1101 ~~Dr~~~Sa~iLDILL~LvqLY~qSGnydKAI~tl~rLEq~Al~g~sE~~lSLsKi~~YLt~sDKc~AWL~~iYllrYrv 1180 (1652)
                       |+.       .++|..+..++...|++++||..+.+...  ++..+.                  .+|.-         
T Consensus       109 -p~~-------~~a~~~~~~~~~~l~~~~eAl~~~~kal~--~dp~n~------------------~a~~~---------  151 (315)
T d2h6fa1         109 -PKN-------YQVWHHRRVLVEWLRDPSQELEFIADILN--QDAKNY------------------HAWQH---------  151 (315)
T ss_dssp             -TTC-------HHHHHHHHHHHHHHTCCTTHHHHHHHHHH--HCTTCH------------------HHHHH---------
T ss_pred             -HHH-------HHHHHHHHHHHHHHCCHHHHHHHHHHHHH--HHHCCH------------------HHHHH---------
T ss_conf             -742-------26898875888850537889988755543--210046------------------88998---------


Q ss_pred             CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCHH
Q ss_conf             60679862011233221689986553123788999999999888630288402343311013686778999999713979
Q 000330         1181 LPDAVLQLLECEKELFAIDWPPVQLEDDEKQRAIKLIEMAVNSVELYSNGESLEKETNLRSAHCFAVNHIWCMAVLNGLE 1260 (1652)
Q Consensus      1181 LPGdiy~q~e~~KEAl~I~W~y~~vlkdEPdnalAL~smA~dYY~~~~ndEsla~~~~~kt~~~tKLN~Ir~lI~LEDse 1260 (1652)
                       .|.++...+...+|+..   +.++++.+|.+..+....+.-+-.  .+                      .+......+
T Consensus       152 -~~~~~~~~~~~~~Al~~---~~~al~~~p~n~~a~~~r~~~l~~--~~----------------------~~~~~~~~~  203 (315)
T d2h6fa1         152 -RQWVIQEFKLWDNELQY---VDQLLKEDVRNNSVWNQRYFVISN--TT----------------------GYNDRAVLE  203 (315)
T ss_dssp             -HHHHHHHHTCCTTHHHH---HHHHHHHCTTCHHHHHHHHHHHHH--TT----------------------CSCSHHHHH
T ss_pred             -HHHHHHHHHHHHHHHHH---HHHHHHHCCCCHHHHHHHHHHHHH--CC----------------------CCCHHHHHH
T ss_conf             -87788888866789999---999998797449999889999987--45----------------------631023547


Q ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHH
Q ss_conf             999999999993998414898999985102687509999999982999983378
Q 000330         1261 CSMNLLEKYIKLYPSCLELVLMKARLQKHDFGDLSSVGFEEALIKWPKGVPGIQ 1314 (1652)
Q Consensus      1261 ~A~~LfdklLk~~P~dveL~L~AAyL~~K~m~~~Aisvle~AL~~~PkNa~g~~ 1314 (1652)
                      +++..+.++++..|.+..+|.+...+..+.+..++...++.++.+.|+....+.
T Consensus       204 ~ai~~~~~al~~~P~~~~~~~~l~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~~  257 (315)
T d2h6fa1         204 REVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLNQLLDLQPSHSSPYL  257 (315)
T ss_dssp             HHHHHHHHHHHHSTTCHHHHHHHHHHHTTTCGGGCHHHHHHHHHHTTTCCCHHH
T ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf             767999999984988569999987798862718899999999972877578999


No 15 
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.91  E-value=3e-08  Score=69.53  Aligned_cols=121  Identities=15%  Similarity=0.116  Sum_probs=97.9

Q ss_pred             HHHHHHHHCCCC--CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH----HHH
Q ss_conf             999998730035--54455999999999999829999899999999997288971289999999850998899----999
Q 000330          997 VEMALLILNQDA--NKLEGMKKALSLLSRALEADPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYA----LWL 1070 (1652)
Q Consensus       997 LelAl~~Lnq~~--n~~g~ydAALdLLsrALEINPtSaelWy~Ll~lY~~~~~~eea~emlekAVelnP~NY~----Lwl 1070 (1652)
                      |+-|..+..+..  ...++|+.|+..|..+|+++|+++.+|+.++.+|..++...++.++|++|++++|.+..    ++.
T Consensus         7 l~~a~~l~~~gn~~~~~~~y~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~~~~a~~~~g~   86 (159)
T d1a17a_           7 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAA   86 (159)
T ss_dssp             HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf             99999999999999995899999998660211000113332456788874054212888899999875446687799999


Q ss_pred             HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH--HHHCCHHHHHH
Q ss_conf             9983589766412359999999998620399993012120379999999998--77068999999
Q 000330         1071 MYINSRTPLNHRLDAYDAALSVLCRCASASDGDEMHASACILDLFLQMLQCF--CMSGNTEKAIQ 1133 (1652)
Q Consensus      1071 mYInsr~slddrl~~YdkAI~vLe~las~~~~Dr~~~Sa~iLDILL~LvqLY--~qSGnydKAI~ 1133 (1652)
                      .|...+        .|++|+..|.+..... |+.       .+++..+.++.  ...+.+++|+.
T Consensus        87 ~~~~~g--------~~~eA~~~~~~a~~~~-p~~-------~~~~~~l~~~~~~~~~~~~~~a~~  135 (159)
T d1a17a_          87 SNMALG--------KFRAALRDYETVVKVK-PHD-------KDAKMKYQECNKIVKQKAFERAIA  135 (159)
T ss_dssp             HHHHTT--------CHHHHHHHHHHHHHHS-TTC-------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHCC--------CHHHHHHHHHHHHHCC-CCC-------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999949--------9999999899998729-997-------999999999999999898999975


No 16 
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.67  E-value=1.3e-06  Score=58.71  Aligned_cols=119  Identities=13%  Similarity=0.154  Sum_probs=91.1

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH----HHHHHHHCCCCCCCCHHHH
Q ss_conf             455999999999999829999899999999997288971289999999850998899----9999983589766412359
Q 000330         1011 LEGMKKALSLLSRALEADPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYA----LWLMYINSRTPLNHRLDAY 1086 (1652)
Q Consensus      1011 ~g~ydAALdLLsrALEINPtSaelWy~Ll~lY~~~~~~eea~emlekAVelnP~NY~----LwlmYInsr~slddrl~~Y 1086 (1652)
                      .++++.|+..|..   +.|.++.+|+.++.+|..+++-.++.++|++|++++|.+..    ++..|...+        .|
T Consensus        18 ~~d~~~Al~~~~~---i~~~~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~~~~a~~~~g~~~~~~g--------~~   86 (192)
T d1hh8a_          18 KKDWKGALDAFSA---VQDPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTE--------KY   86 (192)
T ss_dssp             TTCHHHHHHHHHT---SSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------CH
T ss_pred             CCCHHHHHHHHHH---CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------CH
T ss_conf             7799999999986---489889999999999998589146787899999985523466788999998542--------49


Q ss_pred             HHHHHHHHHHHHCCCCCCC----H----HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
Q ss_conf             9999999986203999930----1----2120379999999998770689999999996305
Q 000330         1087 DAALSVLCRCASASDGDEM----H----ASACILDLFLQMLQCFCMSGNTEKAIQRISRLLI 1140 (1652)
Q Consensus      1087 dkAI~vLe~las~~~~Dr~----~----~Sa~iLDILL~LvqLY~qSGnydKAI~tl~rLEq 1140 (1652)
                      +.|+..|++.....++...    .    .....-++++.+..+|...|++++|++.+.+-..
T Consensus        87 ~~A~~~~~kAl~~~~~n~~~~~~~~~~~~~~~~~e~~~n~a~~~~~~~~~~~A~~~l~~A~~  148 (192)
T d1hh8a_          87 DLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATS  148 (192)
T ss_dssp             HHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf             99999999999867267367899866543630588999999999997899999999999983


No 17 
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.66  E-value=2.6e-07  Score=63.30  Aligned_cols=97  Identities=10%  Similarity=0.013  Sum_probs=87.0

Q ss_pred             CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH----HHHHHHHCCCCCCCCHHH
Q ss_conf             4455999999999999829999899999999997288971289999999850998899----999998358976641235
Q 000330         1010 KLEGMKKALSLLSRALEADPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYA----LWLMYINSRTPLNHRLDA 1085 (1652)
Q Consensus      1010 ~~g~ydAALdLLsrALEINPtSaelWy~Ll~lY~~~~~~eea~emlekAVelnP~NY~----LwlmYInsr~slddrl~~ 1085 (1652)
                      ..|+|+.|+..|..||+++|+++.+|+.++..|..++...++...|++|++.+|.+..    ++.+|...+        .
T Consensus        15 ~~g~~~eAi~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~--------~   86 (117)
T d1elwa_          15 SVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLN--------R   86 (117)
T ss_dssp             HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--------C
T ss_pred             HCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCC--------C
T ss_conf             96999999999999886199601343000110110000112100134677740220267788999999812--------7


Q ss_pred             HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             9999999998620399993012120379999999998
Q 000330         1086 YDAALSVLCRCASASDGDEMHASACILDLFLQMLQCF 1122 (1652)
Q Consensus      1086 YdkAI~vLe~las~~~~Dr~~~Sa~iLDILL~LvqLY 1122 (1652)
                      |++|+..|.+..... |+.       .+++..+-.+.
T Consensus        87 ~~~A~~~~~~a~~~~-p~~-------~~~~~~l~~l~  115 (117)
T d1elwa_          87 FEEAKRTYEEGLKHE-ANN-------PQLKEGLQNME  115 (117)
T ss_dssp             HHHHHHHHHHHHTTC-TTC-------HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHC-CCC-------HHHHHHHHHHH
T ss_conf             999999999999849-898-------99999999783


No 18 
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.55  E-value=7.8e-08  Score=66.77  Aligned_cols=83  Identities=16%  Similarity=0.144  Sum_probs=75.6

Q ss_pred             CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH----HHHHHHHCCCCCCCCHHH
Q ss_conf             4455999999999999829999899999999997288971289999999850998899----999998358976641235
Q 000330         1010 KLEGMKKALSLLSRALEADPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYA----LWLMYINSRTPLNHRLDA 1085 (1652)
Q Consensus      1010 ~~g~ydAALdLLsrALEINPtSaelWy~Ll~lY~~~~~~eea~emlekAVelnP~NY~----LwlmYInsr~slddrl~~ 1085 (1652)
                      ..|+|+.|+..|..+|+++|.++.+|+.++..|...+....+..+|++|++++|.+..    ++..|...+        .
T Consensus        16 ~~g~~~~Ai~~~~kal~~~p~~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a~~~lg~~~~~l~--------~   87 (201)
T d2c2la1          16 VGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEME--------S   87 (201)
T ss_dssp             HTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTT--------C
T ss_pred             HCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC--------C
T ss_conf             86999999999999998599989999817898741000001247888888718873899999999999879--------9


Q ss_pred             HHHHHHHHHHHHHCC
Q ss_conf             999999999862039
Q 000330         1086 YDAALSVLCRCASAS 1100 (1652)
Q Consensus      1086 YdkAI~vLe~las~~ 1100 (1652)
                      |++|+..|.++....
T Consensus        88 ~~~A~~~~~~al~l~  102 (201)
T d2c2la1          88 YDEAIANLQRAYSLA  102 (201)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHC
T ss_conf             999999999998749


No 19 
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]}
Probab=98.43  E-value=1.4e-06  Score=58.29  Aligned_cols=91  Identities=19%  Similarity=0.125  Sum_probs=77.5

Q ss_pred             HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH----H
Q ss_conf             899999999873003554455999999999999829999899999999997288971289999999850998899----9
Q 000330          993 NEQCVEMALLILNQDANKLEGMKKALSLLSRALEADPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYA----L 1068 (1652)
Q Consensus       993 ~elWLelAl~~Lnq~~n~~g~ydAALdLLsrALEINPtSaelWy~Ll~lY~~~~~~eea~emlekAVelnP~NY~----L 1068 (1652)
                      .+.++..+..+...+     +++.|...|..+++++|+++.+|+.++.+|...+...++..+|++|++++|.+..    |
T Consensus        16 ~~~~~~~g~~~~~~g-----~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l   90 (112)
T d1hxia_          16 HENPMEEGLSMLKLA-----NLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAAL   90 (112)
T ss_dssp             CSCHHHHHHHHHHTT-----CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH-----HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
T ss_conf             899999999999876-----058999988610112111100123354564101258774100000111111000003789


Q ss_pred             HHHHHHCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             9999835897664123599999999986
Q 000330         1069 WLMYINSRTPLNHRLDAYDAALSVLCRC 1096 (1652)
Q Consensus      1069 wlmYInsr~slddrl~~YdkAI~vLe~l 1096 (1652)
                      +..|.+.+        .+++|++.|.+.
T Consensus        91 a~~y~~~g--------~~~~A~~~l~~~  110 (112)
T d1hxia_          91 AVSHTNEH--------NANAALASLRAW  110 (112)
T ss_dssp             HHHHHHHH--------HHHHHHHHHHHH
T ss_pred             HHHHHHCC--------CHHHHHHHHHHH
T ss_conf             99999978--------999999999998


No 20 
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.36  E-value=7.9e-06  Score=53.38  Aligned_cols=78  Identities=6%  Similarity=-0.050  Sum_probs=38.4

Q ss_pred             HCCHHHHHHHHHHHHHHCCCCHHH--HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHH
Q ss_conf             139799999999999939984148--989999851026875099999999829999833789999999999973994799
Q 000330         1256 LNGLECSMNLLEKYIKLYPSCLEL--VLMKARLQKHDFGDLSSVGFEEALIKWPKGVPGIQCIWNQYVEYALQNGRHDFA 1333 (1652)
Q Consensus      1256 LEDse~A~~LfdklLk~~P~dveL--~L~AAyL~~K~m~~~Aisvle~AL~~~PkNa~g~~caW~QLIq~al~~~n~d~a 1333 (1652)
                      .++++.|+..|.++   .|..+.+  .|-..|+.+++ -++|+..|++|+.++|+++.    +|+++.....+.++++.|
T Consensus        18 ~~d~~~Al~~~~~i---~~~~~~~~~nlG~~~~~~g~-~~~A~~~~~kAl~ldp~~~~----a~~~~g~~~~~~g~~~~A   89 (192)
T d1hh8a_          18 KKDWKGALDAFSAV---QDPHSRICFNIGCMYTILKN-MTEAEKAFTRSINRDKHLAV----AYFQRGMLYYQTEKYDLA   89 (192)
T ss_dssp             TTCHHHHHHHHHTS---SSCCHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHTTCHHHH
T ss_pred             CCCHHHHHHHHHHC---CCCCHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHCCHHHH
T ss_conf             77999999999864---89889999999999998589-14678789999998552346----678899999854249999


Q ss_pred             HHHHHHHH
Q ss_conf             99999999
Q 000330         1334 AELMDRWF 1341 (1652)
Q Consensus      1334 i~L~~~ff 1341 (1652)
                      +.-+.+.+
T Consensus        90 ~~~~~kAl   97 (192)
T d1hh8a_          90 IKDLKEAL   97 (192)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
T ss_conf             99999999


No 21 
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.21  E-value=8.3e-06  Score=53.23  Aligned_cols=115  Identities=17%  Similarity=0.105  Sum_probs=49.4

Q ss_pred             HHHHHHHHHHHHH------CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCH--H--------HHHHHHH-CCC
Q ss_conf             9999999999982------999989999999999728897128999999985099889--9--------9999983-589
Q 000330         1015 KKALSLLSRALEA------DPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSY--A--------LWLMYIN-SRT 1077 (1652)
Q Consensus      1015 dAALdLLsrALEI------NPtSaelWy~Ll~lY~~~~~~eea~emlekAVelnP~NY--~--------LwlmYIn-sr~ 1077 (1652)
                      +.|...|.+|+++      .+..+.+|..++.+|.+++...++.+++++|+++.+.+-  .        ++.+|.. .+ 
T Consensus        54 ~~A~~~y~kA~~~~~~~~~~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-  132 (290)
T d1qqea_          54 NLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLH-  132 (290)
T ss_dssp             HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-
T ss_pred             HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH-
T ss_conf             9999999999999987599889999999999999980885888999997667765325320589999998886764787-


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
Q ss_conf             76641235999999999862039999301212037999999999877068999999999630
Q 000330         1078 PLNHRLDAYDAALSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTEKAIQRISRLL 1139 (1652)
Q Consensus      1078 slddrl~~YdkAI~vLe~las~~~~Dr~~~Sa~iLDILL~LvqLY~qSGnydKAI~tl~rLE 1139 (1652)
                             .|++|+..|.+.......+  ........++..+..+|...|+|++|+..+.++.
T Consensus       133 -------~~~~A~~~~~~A~~l~~~~--~~~~~~~~~~~~la~~~~~~g~y~~A~~~~~~~~  185 (290)
T d1qqea_         133 -------DYAKAIDCYELAGEWYAQD--QSVALSNKCFIKCADLKALDGQYIEASDIYSKLI  185 (290)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred             -------HHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf             -------8999988999999998733--7603334688999999998173999999999999


No 22 
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]}
Probab=98.21  E-value=1.2e-05  Score=52.26  Aligned_cols=118  Identities=11%  Similarity=0.047  Sum_probs=63.5

Q ss_pred             CCCHHHHHHHHHHHHCCCC--CCHHHHHHHHHHHHHHHHH----------------CCCCHHHHHHHHHHHHHCCCCCHH
Q ss_conf             0108999999998730035--5445599999999999982----------------999989999999999728897128
Q 000330          990 ELSNEQCVEMALLILNQDA--NKLEGMKKALSLLSRALEA----------------DPTSEILWITYLLIFYSNTNSVGK 1051 (1652)
Q Consensus       990 ~~d~elWLelAl~~Lnq~~--n~~g~ydAALdLLsrALEI----------------NPtSaelWy~Ll~lY~~~~~~eea 1051 (1652)
                      ..+.+.|++.|..+-....  ...++|..|+..|..||+.                +|..+.+|..++..|.+++.-..+
T Consensus        17 l~~~~~~~~~a~~~~~~~~~~~~~~~y~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A   96 (169)
T d1ihga1          17 LKDVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGA   96 (169)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHH
T ss_conf             74099999999999999999999088999999999998741111666655778771902399999899999864021013


Q ss_pred             HHHHHHHHHHCCCCHH----HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999850998899----99999835897664123599999999986203999930121203799999999987
Q 000330         1052 DDMFSYSVKHNEGSYA----LWLMYINSRTPLNHRLDAYDAALSVLCRCASASDGDEMHASACILDLFLQMLQCFC 1123 (1652)
Q Consensus      1052 ~emlekAVelnP~NY~----LwlmYInsr~slddrl~~YdkAI~vLe~las~~~~Dr~~~Sa~iLDILL~LvqLY~ 1123 (1652)
                      ...|.+|++++|.+..    ++..|.+.+        .|+.|+..|....... |+.       .++...+..++.
T Consensus        97 i~~~~~al~~~p~~~~a~~~~g~~~~~l~--------~~~~A~~~~~~al~l~-p~n-------~~~~~~l~~~~~  156 (169)
T d1ihga1          97 VDSCLEALEIDPSNTKALYRRAQGWQGLK--------EYDQALADLKKAQEIA-PED-------KAIQAELLKVKQ  156 (169)
T ss_dssp             HHHHHHHHTTCTTCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC-TTC-------HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCC--------CHHHHHHHHHHHHHHC-CCC-------HHHHHHHHHHHH
T ss_conf             66655443100022367776999999804--------7999999999999859-899-------999999999999


No 23 
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]}
Probab=98.21  E-value=8.5e-06  Score=53.14  Aligned_cols=91  Identities=11%  Similarity=0.013  Sum_probs=72.4

Q ss_pred             HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH----HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHH
Q ss_conf             99999999997288971289999999850998899----99999835897664123599999999986203999930121
Q 000330         1033 ILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYA----LWLMYINSRTPLNHRLDAYDAALSVLCRCASASDGDEMHAS 1108 (1652)
Q Consensus      1033 elWy~Ll~lY~~~~~~eea~emlekAVelnP~NY~----LwlmYInsr~slddrl~~YdkAI~vLe~las~~~~Dr~~~S 1108 (1652)
                      ..|+..+..+.+.+.-.++..+|++|++.+|++.+    |+..|...+        .+++|+..|.+..... |+.    
T Consensus        17 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~--------~~~~A~~~~~~al~~~-p~~----   83 (112)
T d1hxia_          17 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENE--------KDGLAIIALNHARMLD-PKD----   83 (112)
T ss_dssp             SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC-TTC----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH--------HHHHHHCCCCCCCCCC-CCC----
T ss_conf             999999999998760589999886101121111001233545641012--------5877410000011111-100----


Q ss_pred             HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
Q ss_conf             2037999999999877068999999999630
Q 000330         1109 ACILDLFLQMLQCFCMSGNTEKAIQRISRLL 1139 (1652)
Q Consensus      1109 a~iLDILL~LvqLY~qSGnydKAI~tl~rLE 1139 (1652)
                         .++++.+..+|...|++++|+..+.|.+
T Consensus        84 ---~~a~~~la~~y~~~g~~~~A~~~l~~~l  111 (112)
T d1hxia_          84 ---IAVHAALAVSHTNEHNANAALASLRAWL  111 (112)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---CCCHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf             ---0003789999999789999999999981


No 24 
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.18  E-value=5.5e-05  Score=47.74  Aligned_cols=113  Identities=11%  Similarity=0.030  Sum_probs=53.0

Q ss_pred             HHHHHHHHHCCCC--CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf             9999998730035--54455999999999999829999899999999997288971289999999850998899999998
Q 000330          996 CVEMALLILNQDA--NKLEGMKKALSLLSRALEADPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYALWLMYI 1073 (1652)
Q Consensus       996 WLelAl~~Lnq~~--n~~g~ydAALdLLsrALEINPtSaelWy~Ll~lY~~~~~~eea~emlekAVelnP~NY~LwlmYI 1073 (1652)
                      =|+.|..+-..+.  ...++|+.|...|..||++.|.....+.......          ..+..++     -..++..|.
T Consensus         9 k~~~a~~l~~~G~~~~~~~~~~~Ai~~y~~al~~~~~~~~~~~~~~~~~----------~~~~~~~-----~~nla~~y~   73 (170)
T d1p5qa1           9 KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKA----------QALRLAS-----HLNLAMCHL   73 (170)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHH----------HHHHHHH-----HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH----------CHHHHHH-----HHHHHHHHH
T ss_conf             9999999999999999969999999999999887510100035777640----------6467999-----999999988


Q ss_pred             HCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
Q ss_conf             358976641235999999999862039999301212037999999999877068999999999630
Q 000330         1074 NSRTPLNHRLDAYDAALSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTEKAIQRISRLL 1139 (1652)
Q Consensus      1074 nsr~slddrl~~YdkAI~vLe~las~~~~Dr~~~Sa~iLDILL~LvqLY~qSGnydKAI~tl~rLE 1139 (1652)
                      +.+        .|++|+..+.+....+ |+.       ...++.+..+|...|+|+.|+..+.+..
T Consensus        74 k~~--------~~~~A~~~~~~al~~~-p~~-------~~a~~~~g~~~~~~g~~~~A~~~~~~al  123 (170)
T d1p5qa1          74 KLQ--------AFSAAIESCNKALELD-SNN-------EKGLSRRGEAHLAVNDFELARADFQKVL  123 (170)
T ss_dssp             HTT--------CHHHHHHHHHHHHHHC-TTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred             HHH--------HCCCCCCHHHHHHHCC-CCC-------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             642--------1101100000001002-231-------0346777999987222999999999999


No 25 
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.15  E-value=3.6e-05  Score=48.97  Aligned_cols=95  Identities=14%  Similarity=0.098  Sum_probs=84.6

Q ss_pred             CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH----HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             99899999999997288971289999999850998899----99999835897664123599999999986203999930
Q 000330         1030 TSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYA----LWLMYINSRTPLNHRLDAYDAALSVLCRCASASDGDEM 1105 (1652)
Q Consensus      1030 tSaelWy~Ll~lY~~~~~~eea~emlekAVelnP~NY~----LwlmYInsr~slddrl~~YdkAI~vLe~las~~~~Dr~ 1105 (1652)
                      .+++.+...+..|+..+.-.++...|++|++.+|.+..    ++..|...+        .|++|+..|..+.... |+. 
T Consensus         2 ~~a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~~~~~~~~lg~~y~~~~--------~~~~Ai~~~~~al~l~-p~~-   71 (201)
T d2c2la1           2 PSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQ--------QPEQALADCRRALELD-GQS-   71 (201)
T ss_dssp             CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHTTSC-TTC-
T ss_pred             HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHC-CCC-
T ss_conf             649999999999998699999999999999859998999981789874100--------0001247888888718-873-


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
Q ss_conf             12120379999999998770689999999996305
Q 000330         1106 HASACILDLFLQMLQCFCMSGNTEKAIQRISRLLI 1140 (1652)
Q Consensus      1106 ~~Sa~iLDILL~LvqLY~qSGnydKAI~tl~rLEq 1140 (1652)
                            .+.|+.+..+|...|++++|+..+.+...
T Consensus        72 ------~~a~~~lg~~~~~l~~~~~A~~~~~~al~  100 (201)
T d2c2la1          72 ------VKAHFFLGQCQLEMESYDEAIANLQRAYS  100 (201)
T ss_dssp             ------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred             ------HHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf             ------89999999999987999999999999987


No 26 
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.15  E-value=6.4e-06  Score=53.99  Aligned_cols=86  Identities=13%  Similarity=0.196  Sum_probs=73.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH-----------HHHHHHHCCC
Q ss_conf             54455999999999999829999899999999997288971289999999850998899-----------9999983589
Q 000330         1009 NKLEGMKKALSLLSRALEADPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYA-----------LWLMYINSRT 1077 (1652)
Q Consensus      1009 n~~g~ydAALdLLsrALEINPtSaelWy~Ll~lY~~~~~~eea~emlekAVelnP~NY~-----------LwlmYInsr~ 1077 (1652)
                      ...++|+.|+..|.++|+++|+++.+|+.++..|..++.-..+.+.|++|++++|.+..           ++..|...+ 
T Consensus        15 ~~~~~y~~Ai~~y~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~~~a~~~~~lg~~~~~~~-   93 (128)
T d1elra_          15 YKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEE-   93 (128)
T ss_dssp             HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHTT-
T ss_pred             HHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC-
T ss_conf             9859999999999999884964589998688999881860778999999998680127889889999999999999938-


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             76641235999999999862039999
Q 000330         1078 PLNHRLDAYDAALSVLCRCASASDGD 1103 (1652)
Q Consensus      1078 slddrl~~YdkAI~vLe~las~~~~D 1103 (1652)
                             .|++|+..|....... ++
T Consensus        94 -------~~~~A~~~~~kal~~~-~~  111 (128)
T d1elra_          94 -------KYKDAIHFYNKSLAEH-RT  111 (128)
T ss_dssp             -------CHHHHHHHHHHHHHHC-CC
T ss_pred             -------CHHHHHHHHHHHHHCC-CC
T ss_conf             -------8999999999998459-99


No 27 
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=98.08  E-value=2.7e-05  Score=49.83  Aligned_cols=94  Identities=6%  Similarity=-0.002  Sum_probs=70.1

Q ss_pred             CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC----------CCHHHHHHHHHHHHCCCCHH----HHHHHHHC
Q ss_conf             44559999999999998299998999999999972889----------71289999999850998899----99999835
Q 000330         1010 KLEGMKKALSLLSRALEADPTSEILWITYLLIFYSNTN----------SVGKDDMFSYSVKHNEGSYA----LWLMYINS 1075 (1652)
Q Consensus      1010 ~~g~ydAALdLLsrALEINPtSaelWy~Ll~lY~~~~~----------~eea~emlekAVelnP~NY~----LwlmYIns 1075 (1652)
                      ..+.++.|+..|..+++++|+++.+|+.++..+...+.          -+++...|++|++++|.+..    ++..|...
T Consensus         9 r~~~fe~A~~~~e~al~~~P~~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~~~~a~~~lG~~y~~~   88 (145)
T d1zu2a1           9 RILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSF   88 (145)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred             HHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
T ss_conf             87369999999999986188310899999999987621333367788788899999998873012058776689999870


Q ss_pred             CC---CCCCCHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             89---766412359999999998620399993
Q 000330         1076 RT---PLNHRLDAYDAALSVLCRCASASDGDE 1104 (1652)
Q Consensus      1076 r~---slddrl~~YdkAI~vLe~las~~~~Dr 1104 (1652)
                      +.   ........|.+|+..|..+.... |+.
T Consensus        89 g~~~~~~~~~~~~~~~A~~~~~kal~l~-P~~  119 (145)
T d1zu2a1          89 AFLTPDETEAKHNFDLATQFFQQAVDEQ-PDN  119 (145)
T ss_dssp             HHHCCCHHHHHHHHHHHHHHHHHHHHHC-TTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHCCCCCC-CCH
T ss_conf             1011357889886787631211000259-888


No 28 
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.05  E-value=2.5e-05  Score=50.03  Aligned_cols=77  Identities=8%  Similarity=-0.047  Sum_probs=30.1

Q ss_pred             CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHH
Q ss_conf             00108999999998730035544559999999999998299998999999999972889712899999998509988999
Q 000330          989 VELSNEQCVEMALLILNQDANKLEGMKKALSLLSRALEADPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYAL 1068 (1652)
Q Consensus       989 ~~~d~elWLelAl~~Lnq~~n~~g~ydAALdLLsrALEINPtSaelWy~Ll~lY~~~~~~eea~emlekAVelnP~NY~L 1068 (1652)
                      .|.+...|..+|.-++..+     +++.|+..+.++++++|+++.+|+.++.+|..++...++...|++|++++|.+..+
T Consensus        33 ~p~~~~~~~~~a~~~~~~~-----~~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~  107 (117)
T d1elwa_          33 DPHNHVLYSNRSAAYAKKG-----DYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQL  107 (117)
T ss_dssp             CTTCHHHHHHHHHHHHHHT-----CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHH
T ss_pred             CCCCHHHHHCCCCCCCCCC-----CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHH
T ss_conf             9960134300011011000-----01121001346777402202677889999998127999999999999849898999


Q ss_pred             HH
Q ss_conf             99
Q 000330         1069 WL 1070 (1652)
Q Consensus      1069 wl 1070 (1652)
                      +.
T Consensus       108 ~~  109 (117)
T d1elwa_         108 KE  109 (117)
T ss_dssp             HH
T ss_pred             HH
T ss_conf             99


No 29 
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]}
Probab=98.03  E-value=7.4e-06  Score=53.56  Aligned_cols=184  Identities=14%  Similarity=0.092  Sum_probs=109.4

Q ss_pred             CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf             44559999999999998299998999999999972889712899999998509988999999983589766412359999
Q 000330         1010 KLEGMKKALSLLSRALEADPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYALWLMYINSRTPLNHRLDAYDAA 1089 (1652)
Q Consensus      1010 ~~g~ydAALdLLsrALEINPtSaelWy~Ll~lY~~~~~~eea~emlekAVelnP~NY~LwlmYInsr~slddrl~~YdkA 1089 (1652)
                      .-|+++.|+..|..+++.+|+++.++..|+.+|...|.-+++...|++|++++|+....+..|...-....    ....+
T Consensus         8 ~~G~l~eAl~~l~~al~~~P~d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~~~~~l~~ll~a~~----~~~~a   83 (264)
T d1zbpa1           8 SEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQ----ARKDF   83 (264)
T ss_dssp             TTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHH----HHHHH
T ss_pred             HCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC----CCHHH
T ss_conf             88899999999999999789999999999999998799999999999999869973899999999998346----63789


Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHH
Q ss_conf             99999862039999301212037999999999877068999999999630522499996423089999864127732056
Q 000330         1090 LSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTEKAIQRISRLLIPATGSNDRHSLFLSDILTCLTISDKLIFW 1169 (1652)
Q Consensus      1090 I~vLe~las~~~~Dr~~~Sa~iLDILL~LvqLY~qSGnydKAI~tl~rLEq~Al~g~sE~~lSLsKi~~YLt~sDKc~AW 1169 (1652)
                      ...+.......+++.       ...++.+..++...|+++.|+..+.++++  +....+. ..-..--..+.-+|..+.-
T Consensus        84 ~~~~~~~~~~~~p~~-------~~~~l~~a~~~~~~gd~~~A~~~~~~a~e--~~p~~~~-~~~~~~f~wi~D~D~Rlg~  153 (264)
T d1zbpa1          84 AQGAATAKVLGENEE-------LTKSLVSFNLSMVSQDYEQVSELALQIEE--LRQEKGF-LANDTSFSDVRDIDDRLGG  153 (264)
T ss_dssp             TTSCCCEECCCSCHH-------HHHHHHHHHHHHHHTCHHHHHHHHHHHHH--HCCCCCE-EETTEEESCEEESSTTTTT
T ss_pred             HHHHHHHHCCCCCHH-------HHHHHHHHHHHHHCCCHHHHHHHHHHHHH--CCCCCCC-CCCCCCHHHHHCCCHHHHH
T ss_conf             987544420358647-------99999999999967998999999999983--3999981-0015577887443302066


Q ss_pred             HHHHHH--HHHHCCCHHHH--HHHHHHHHHHCCCCCCCCCCH
Q ss_conf             888899--98501606798--620112332216899865531
Q 000330         1170 VCCVYL--VIYRKLPDAVL--QLLECEKELFAIDWPPVQLED 1207 (1652)
Q Consensus      1170 L~~iYl--lrYrvLPGdiy--~q~e~~KEAl~I~W~y~~vlk 1207 (1652)
                      +|.+..  -.|.=+|=+=+  .....++.+.++.|....+.-
T Consensus       154 ~~E~~~~~G~Y~w~p~~~i~~~~~~~p~~l~d~~w~~~~~~~  195 (264)
T d1zbpa1         154 YIELFSTAGNYFLVPIASINTLEIKSATSLLESVWRPVEFDI  195 (264)
T ss_dssp             EEEEECTTSCEEEEEGGGEEEEEECCCCSSGGGTEEEEEEEE
T ss_pred             HHHHHHCCCCEEEECHHHHHHHHCCCCCCHHHHHHHHEEEEE
T ss_conf             887652478279861898533425899988987411137883


No 30 
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.95  E-value=5.7e-05  Score=47.64  Aligned_cols=86  Identities=10%  Similarity=0.018  Sum_probs=70.1

Q ss_pred             CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC---HHHHHHHHHHHHCCCCH------HHHHHHHHCCCCCC
Q ss_conf             4455999999999999829999899999999997288971---28999999985099889------99999983589766
Q 000330         1010 KLEGMKKALSLLSRALEADPTSEILWITYLLIFYSNTNSV---GKDDMFSYSVKHNEGSY------ALWLMYINSRTPLN 1080 (1652)
Q Consensus      1010 ~~g~ydAALdLLsrALEINPtSaelWy~Ll~lY~~~~~~e---ea~emlekAVelnP~NY------~LwlmYInsr~sld 1080 (1652)
                      +.+.++.|-..|.++|+++|.++++++.|+..++..+...   ++..+|+++++.+|.+.      .|+..|.+.+    
T Consensus        11 ~~~~l~~Ae~~Y~~aL~~~p~~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~y~~~g----   86 (122)
T d1nzna_          11 SVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLK----   86 (122)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTT----
T ss_pred             CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH----
T ss_conf             9999999999999988329998999999999999851267899999999999860699319999999999999973----


Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             412359999999998620399993
Q 000330         1081 HRLDAYDAALSVLCRCASASDGDE 1104 (1652)
Q Consensus      1081 drl~~YdkAI~vLe~las~~~~Dr 1104 (1652)
                          .|++|+..|.++.... |+.
T Consensus        87 ----~~~~A~~~~~~aL~~~-P~~  105 (122)
T d1nzna_          87 ----EYEKALKYVRGLLQTE-PQN  105 (122)
T ss_dssp             ----CHHHHHHHHHHHHHHC-TTC
T ss_pred             ----HHHHHHHHHHHHHHHC-CCC
T ss_conf             ----1699999999999769-098


No 31 
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]}
Probab=97.95  E-value=0.00024  Score=43.45  Aligned_cols=115  Identities=5%  Similarity=0.007  Sum_probs=64.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCCH---------------HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH----HH
Q ss_conf             544559999999999998299998---------------99999999997288971289999999850998899----99
Q 000330         1009 NKLEGMKKALSLLSRALEADPTSE---------------ILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYA----LW 1069 (1652)
Q Consensus      1009 n~~g~ydAALdLLsrALEINPtSa---------------elWy~Ll~lY~~~~~~eea~emlekAVelnP~NY~----Lw 1069 (1652)
                      ...|+|..|+..|..||.+.|...               .+|.-++..|+.++...++..+|++|++++|.+..    ++
T Consensus        26 ~~~~~~~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Ai~~~~~al~l~p~~~~a~~~~~  105 (168)
T d1kt1a1          26 FKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRG  105 (168)
T ss_dssp             HHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred             HHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHH
T ss_conf             99599999999999999999875001245553106467999984999987762201100022322201310488999889


Q ss_pred             HHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHC
Q ss_conf             999835897664123599999999986203999930121203799999999987706899-9999999630
Q 000330         1070 LMYINSRTPLNHRLDAYDAALSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTE-KAIQRISRLL 1139 (1652)
Q Consensus      1070 lmYInsr~slddrl~~YdkAI~vLe~las~~~~Dr~~~Sa~iLDILL~LvqLY~qSGnyd-KAI~tl~rLE 1139 (1652)
                      ..|...+        .|++|+..|.++.... |+.       .+++..+..+....+.+. +.-..+.+|+
T Consensus       106 ~~~~~l~--------~~~~A~~~~~~al~l~-P~n-------~~~~~~l~~~~~~~~~~~e~~kk~~~~~f  160 (168)
T d1kt1a1         106 EAQLLMN--------EFESAKGDFEKVLEVN-PQN-------KAARLQIFMCQKKAKEHNERDRRTYANMF  160 (168)
T ss_dssp             HHHHHTT--------CHHHHHHHHHHHHHSC-TTC-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHCC--------CHHHHHHHHHHHHHHC-CCC-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9998827--------8999999999999859-898-------99999999999999869999999999998


No 32 
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.91  E-value=1.5e-05  Score=51.51  Aligned_cols=217  Identities=10%  Similarity=-0.016  Sum_probs=128.5

Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH-------HHHHHHHCCCCCCCCHHHHH
Q ss_conf             99999999999829999899999999997288971289999999850998899-------99999835897664123599
Q 000330         1015 KKALSLLSRALEADPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYA-------LWLMYINSRTPLNHRLDAYD 1087 (1652)
Q Consensus      1015 dAALdLLsrALEINPtSaelWy~Ll~lY~~~~~~eea~emlekAVelnP~NY~-------LwlmYInsr~slddrl~~Yd 1087 (1652)
                      ..|...|..|++++|+.+.+|+.++..|..+++   ..+.|++|+..+|....       ||.     .        .|.
T Consensus         3 ~eA~q~~~qA~~l~p~~a~a~~~la~~~~~~~~---l~eaye~~i~~dp~~a~~~~~e~~Lw~-----~--------~y~   66 (497)
T d1ya0a1           3 LQSAQYLRQAEVLKADMTDSKLGPAEVWTSRQA---LQDLYQKMLVTDLEYALDKKVEQDLWN-----H--------AFK   66 (497)
T ss_dssp             HHHHHHHHHHHHHHGGGTCSSSCSSSSHHHHHH---HHHHHHHHHHHCHHHHHHHTHHHHHHH-----H--------HTH
T ss_pred             HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCH---HHHHHHHHHHCCHHHHHHHHHHHHHHH-----H--------HHH
T ss_conf             899999999987199979999519999999762---999999998749301999857999999-----9--------999


Q ss_pred             HHHHHHHHHHHCC-CCCCCHHHHHHHHHH-HHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf             9999999862039-999301212037999-99999987706899999999963052249999642308999986412773
Q 000330         1088 AALSVLCRCASAS-DGDEMHASACILDLF-LQMLQCFCMSGNTEKAIQRISRLLIPATGSNDRHSLFLSDILTCLTISDK 1165 (1652)
Q Consensus      1088 kAI~vLe~las~~-~~Dr~~~Sa~iLDIL-L~LvqLY~qSGnydKAI~tl~rLEq~Al~g~sE~~lSLsKi~~YLt~sDK 1165 (1652)
                      .+++.+-...+.. .++.       ..+. ..+..++..++.|++||..+.....  +   .+              .+.
T Consensus        67 ~~ie~~r~~~k~~~~~~~-------~~~~~~~~~~l~~a~~~Y~~ai~~l~~~~~--l---~~--------------~~~  120 (497)
T d1ya0a1          67 NQITTLQGQAKNRANPNR-------SEVQANLSLFLEAASGFYTQLLQELCTVFN--V---DL--------------PCR  120 (497)
T ss_dssp             HHHHHHHHHHSCSSCTTT-------THHHHHHHHHHHHHHHHHHHHHHHHTC----------------------------
T ss_pred             HHHHHHHHHCCCCCCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--C---CH--------------HHH
T ss_conf             999999985616458437-------999999999999999999999999999878--9---91--------------139


Q ss_pred             CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHHH
Q ss_conf             20568888999850160679862011233221689986553123788999999999888630288402343311013686
Q 000330         1166 LIFWVCCVYLVIYRKLPDAVLQLLECEKELFAIDWPPVQLEDDEKQRAIKLIEMAVNSVELYSNGESLEKETNLRSAHCF 1245 (1652)
Q Consensus      1166 c~AWL~~iYllrYrvLPGdiy~q~e~~KEAl~I~W~y~~vlkdEPdnalAL~smA~dYY~~~~ndEsla~~~~~kt~~~t 1245 (1652)
                       .+         + ...|..+...+...+|..-   +...+..+|..++  +.+|                         
T Consensus       121 -~~---------~-~~lg~~~~~~~~~~~A~~~---~~~al~~~~~~~~--~~LG-------------------------  159 (497)
T d1ya0a1         121 -VK---------S-SQLGIISNKQTHTSAIVKP---QSSSCSYICQHCL--VHLG-------------------------  159 (497)
T ss_dssp             ------------------------------------CCHHHHHHHHHHH--HHHH-------------------------
T ss_pred             -HH---------H-HHHHHHHHHCCCHHHHHHH---HHHHHCCCHHHHH--HHHH-------------------------
T ss_conf             -99---------9-9857998758999999999---9988278899999--9999-------------------------


Q ss_pred             HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHH--HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf             7789999997139799999999999939984148--98999985102687509999999982999983378999999999
Q 000330         1246 AVNHIWCMAVLNGLECSMNLLEKYIKLYPSCLEL--VLMKARLQKHDFGDLSSVGFEEALIKWPKGVPGIQCIWNQYVEY 1323 (1652)
Q Consensus      1246 KLN~Ir~lI~LEDse~A~~LfdklLk~~P~dveL--~L~AAyL~~K~m~~~Aisvle~AL~~~PkNa~g~~caW~QLIq~ 1323 (1652)
                           ..+...++.+.|+..|.++++..|.+...  .|...|....+ ..+|+.-|.++|...|....    +|.-|...
T Consensus       160 -----~l~~~~~~~~~A~~~y~~A~~l~P~~~~~~~~Lg~~~~~~~~-~~~A~~~y~ral~~~~~~~~----a~~nL~~~  229 (497)
T d1ya0a1         160 -----DIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGD-HLTTIFYYCRSIAVKFPFPA----ASTNLQKA  229 (497)
T ss_dssp             -----HHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTC-HHHHHHHHHHHHSSSBCCHH----HHHHHHHH
T ss_pred             -----HHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHCCCCCHH----HHHHHHHH
T ss_conf             -----999980247899999999998789965999999999998699-99999999999817999789----99999999


Q ss_pred             H
Q ss_conf             9
Q 000330         1324 A 1324 (1652)
Q Consensus      1324 a 1324 (1652)
                      .
T Consensus       230 ~  230 (497)
T d1ya0a1         230 L  230 (497)
T ss_dssp             H
T ss_pred             H
T ss_conf             9


No 33 
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.90  E-value=7.1e-05  Score=46.98  Aligned_cols=87  Identities=11%  Similarity=0.138  Sum_probs=44.3

Q ss_pred             HHHHHHHCCCCCHHHHHHHHHHHHCCCCHH----HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf             999997288971289999999850998899----9999983589766412359999999998620399993012120379
Q 000330         1038 YLLIFYSNTNSVGKDDMFSYSVKHNEGSYA----LWLMYINSRTPLNHRLDAYDAALSVLCRCASASDGDEMHASACILD 1113 (1652)
Q Consensus      1038 Ll~lY~~~~~~eea~emlekAVelnP~NY~----LwlmYInsr~slddrl~~YdkAI~vLe~las~~~~Dr~~~Sa~iLD 1113 (1652)
                      .+..|++.+.-.++...|++|++++|.+..    ++..|+..+        .+++|+..|..+...+ |+.       .+
T Consensus        16 ~gn~~~~~~~y~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~--------~~~~A~~~~~kal~~~-p~~-------~~   79 (159)
T d1a17a_          16 QANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTE--------CYGYALGDATRAIELD-KKY-------IK   79 (159)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC-TTC-------HH
T ss_pred             HHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC--------CCCHHHHHHHHHHHHC-CCC-------HH
T ss_conf             9999999589999999866021100011333245678887405--------4212888899999875-446-------68


Q ss_pred             HHHHHHHHHHHHCCHHHHHHHHHHHCC
Q ss_conf             999999998770689999999996305
Q 000330         1114 LFLQMLQCFCMSGNTEKAIQRISRLLI 1140 (1652)
Q Consensus      1114 ILL~LvqLY~qSGnydKAI~tl~rLEq 1140 (1652)
                      +|..+..+|...|+++.|+..+.+...
T Consensus        80 a~~~~g~~~~~~g~~~eA~~~~~~a~~  106 (159)
T d1a17a_          80 GYYRRAASNMALGKFRAALRDYETVVK  106 (159)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf             779999999994999999998999987


No 34 
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Probab=97.83  E-value=0.00024  Score=43.51  Aligned_cols=19  Identities=16%  Similarity=0.118  Sum_probs=9.0

Q ss_pred             HHHHHHHHHHHHHHHHCCC
Q ss_conf             5599999999999982999
Q 000330         1012 EGMKKALSLLSRALEADPT 1030 (1652)
Q Consensus      1012 g~ydAALdLLsrALEINPt 1030 (1652)
                      ++|..|+..|..||++.|.
T Consensus        31 ~~y~~A~~~Y~~al~~~~~   49 (153)
T d2fbna1          31 NEINEAIVKYKEALDFFIH   49 (153)
T ss_dssp             TCHHHHHHHHHHHHHTTTT
T ss_pred             CCHHHHHHHHHHHHHHCCC
T ss_conf             9999999999987760730


No 35 
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.77  E-value=4.9e-05  Score=48.06  Aligned_cols=114  Identities=13%  Similarity=-0.057  Sum_probs=79.0

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH--HHHHHHHCCCCCCCCHHHHHH
Q ss_conf             455999999999999829999899999999997288971289999999850998899--999998358976641235999
Q 000330         1011 LEGMKKALSLLSRALEADPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYA--LWLMYINSRTPLNHRLDAYDA 1088 (1652)
Q Consensus      1011 ~g~ydAALdLLsrALEINPtSaelWy~Ll~lY~~~~~~eea~emlekAVelnP~NY~--LwlmYInsr~slddrl~~Ydk 1088 (1652)
                      .+.|+.|+..|..++.++|..+.+|+.++..|...+....+...+.+|++.+|..-.  |+.+|...+        .|++
T Consensus        99 ~~~Y~~ai~~l~~~~~l~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~LG~l~~~~~--------~~~~  170 (497)
T d1ya0a1          99 SGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRN--------QTSQ  170 (497)
T ss_dssp             HHHHHHHHHHHTC-------------------------------CCHHHHHHHHHHHHHHHHHHHHTT--------CHHH
T ss_pred             HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC--------CHHH
T ss_conf             99999999999998789911399999857998758999999999998827889999999999999802--------4789


Q ss_pred             HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
Q ss_conf             9999998620399993012120379999999998770689999999996305
Q 000330         1089 ALSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTEKAIQRISRLLI 1140 (1652)
Q Consensus      1089 AI~vLe~las~~~~Dr~~~Sa~iLDILL~LvqLY~qSGnydKAI~tl~rLEq 1140 (1652)
                      |+..|.++.... |+.       -+++.+|..+|...|++..|+.-+.|-..
T Consensus       171 A~~~y~~A~~l~-P~~-------~~~~~~Lg~~~~~~~~~~~A~~~y~ral~  214 (497)
T d1ya0a1         171 AESYYRHAAQLV-PSN-------GQPYNQLAILASSKGDHLTTIFYYCRSIA  214 (497)
T ss_dssp             HHHHHHHHHHHC-TTB-------SHHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHC-CCC-------HHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf             999999999878-996-------59999999999986999999999999981


No 36 
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.75  E-value=0.00024  Score=43.47  Aligned_cols=121  Identities=11%  Similarity=-0.012  Sum_probs=57.9

Q ss_pred             CCHHHHHHHHHHHHCCCC--------CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
Q ss_conf             108999999998730035--------544559999999999998299998999999999972889712899999998509
Q 000330          991 LSNEQCVEMALLILNQDA--------NKLEGMKKALSLLSRALEADPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHN 1062 (1652)
Q Consensus       991 ~d~elWLelAl~~Lnq~~--------n~~g~ydAALdLLsrALEINPtSaelWy~Ll~lY~~~~~~eea~emlekAVeln 1062 (1652)
                      .|.+-.|+-|.+.+....        ..+.+|+.|.++|.++              +.+|...+.-.++.++|++|+++.
T Consensus         2 ~~~~~~l~~aek~~~~~~~~~~~~~~~~~~~~~~Aa~~y~~a--------------a~~y~~~~~~~~A~~~y~kA~~~~   67 (290)
T d1qqea_           2 SDPVELLKRAEKKGVPSSGFMKLFSGSDSYKFEEAADLCVQA--------------ATIYRLRKELNLAGDSFLKAADYQ   67 (290)
T ss_dssp             CCHHHHHHHHHHHSSCCCTHHHHHSCCSHHHHHHHHHHHHHH--------------HHHHHHTTCTHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHH--------------HHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf             989999999998647324699885377643699999999999--------------999998869999999999999999


Q ss_pred             CC--C-------HH-HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCHHHH
Q ss_conf             98--8-------99-999998358976641235999999999862039999301212037999999999877-0689999
Q 000330         1063 EG--S-------YA-LWLMYINSRTPLNHRLDAYDAALSVLCRCASASDGDEMHASACILDLFLQMLQCFCM-SGNTEKA 1131 (1652)
Q Consensus      1063 P~--N-------Y~-LwlmYInsr~slddrl~~YdkAI~vLe~las~~~~Dr~~~Sa~iLDILL~LvqLY~q-SGnydKA 1131 (1652)
                      +.  +       |. ++.+|...+        .+++|+..|.+..... +.. ........++..+..+|-. .|++++|
T Consensus        68 ~~~~~~~~~a~~~~~~g~~y~~~~--------~~~~A~~~~~~a~~~~-~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~A  137 (290)
T d1qqea_          68 KKAGNEDEAGNTYVEAYKCFKSGG--------NSVNAVDSLENAIQIF-THR-GQFRRGANFKFELGEILENDLHDYAKA  137 (290)
T ss_dssp             HHTTCHHHHHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHH-HHT-TCHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred             HHCCCCHHHHHHHHHHHHHHHHHC--------CCHHHHHHHHHHHHHH-HHC-CCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             875998899999999999999808--------8588899999766776-532-532058999999888676478789999


Q ss_pred             HHHH
Q ss_conf             9999
Q 000330         1132 IQRI 1135 (1652)
Q Consensus      1132 I~tl 1135 (1652)
                      |..+
T Consensus       138 ~~~~  141 (290)
T d1qqea_         138 IDCY  141 (290)
T ss_dssp             HHHH
T ss_pred             HHHH
T ss_conf             8899


No 37 
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]}
Probab=97.71  E-value=0.0002  Score=44.03  Aligned_cols=75  Identities=11%  Similarity=-0.012  Sum_probs=46.5

Q ss_pred             CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHH
Q ss_conf             00108999999998730035544559999999999998299998999999999972889712899999998509988999
Q 000330          989 VELSNEQCVEMALLILNQDANKLEGMKKALSLLSRALEADPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYAL 1068 (1652)
Q Consensus       989 ~~~d~elWLelAl~~Lnq~~n~~g~ydAALdLLsrALEINPtSaelWy~Ll~lY~~~~~~eea~emlekAVelnP~NY~L 1068 (1652)
                      .|.....|..+|..+...     ++|+.|+..+.+||+++|+.+.+|+.++..|..++.-.++.+.|++|++++|+|-.+
T Consensus        73 ~~~~~~~~~nla~~~~~~-----~~~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~  147 (169)
T d1ihga1          73 QPVALSCVLNIGACKLKM-----SDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAI  147 (169)
T ss_dssp             HHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred             CHHHHHHHHHHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHH
T ss_conf             902399999899999864-----021013666554431000223677769999998047999999999999859899999


No 38 
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=97.68  E-value=0.00011  Score=45.65  Aligned_cols=103  Identities=12%  Similarity=0.051  Sum_probs=67.6

Q ss_pred             HHHHCCCCHHHHHHHHHHHHCCCC-----CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC-----------C
Q ss_conf             221000108999999998730035-----544559999999999998299998999999999972889-----------7
Q 000330          985 KLKQVELSNEQCVEMALLILNQDA-----NKLEGMKKALSLLSRALEADPTSEILWITYLLIFYSNTN-----------S 1048 (1652)
Q Consensus       985 ~le~~~~d~elWLelAl~~Lnq~~-----n~~g~ydAALdLLsrALEINPtSaelWy~Ll~lY~~~~~-----------~ 1048 (1652)
                      =|+..|.+.+.|..++..++....     ...+.++.|+..|.++|+++|+++.+|+.++..|..++.           -
T Consensus        23 al~~~P~~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~~~~a~~~lG~~y~~~g~~~~~~~~~~~~~  102 (145)
T d1zu2a1          23 TYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNF  102 (145)
T ss_dssp             HHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_pred             HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             98618831089999999998762133336778878889999999887301205877668999987010113578898867


Q ss_pred             CHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             12899999998509988999999983589766412359999999998620
Q 000330         1049 VGKDDMFSYSVKHNEGSYALWLMYINSRTPLNHRLDAYDAALSVLCRCAS 1098 (1652)
Q Consensus      1049 eea~emlekAVelnP~NY~LwlmYInsr~slddrl~~YdkAI~vLe~las 1098 (1652)
                      ..+.++|++|++++|+|...+   ...+        .+.+|++.+.+..+
T Consensus       103 ~~A~~~~~kal~l~P~~~~~~---~~L~--------~~~ka~~~~~e~~k  141 (145)
T d1zu2a1         103 DLATQFFQQAVDEQPDNTHYL---KSLE--------MTAKAPQLHAEAYK  141 (145)
T ss_dssp             HHHHHHHHHHHHHCTTCHHHH---HHHH--------HHHTHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCCCHHHHH---HHHH--------HHHHHHHHHHHHHH
T ss_conf             876312110002598889999---9999--------99997978999998


No 39 
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.58  E-value=0.00024  Score=43.49  Aligned_cols=68  Identities=15%  Similarity=0.059  Sum_probs=40.1

Q ss_pred             HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH
Q ss_conf             9999999873003554455999999999999829999899999999997288971289999999850998899
Q 000330          995 QCVEMALLILNQDANKLEGMKKALSLLSRALEADPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYA 1067 (1652)
Q Consensus       995 lWLelAl~~Lnq~~n~~g~ydAALdLLsrALEINPtSaelWy~Ll~lY~~~~~~eea~emlekAVelnP~NY~ 1067 (1652)
                      ++..+|.-++..     ++|+.|+..+.++|+++|+++.+|+.++.+|..++.-.++...|++|++++|+|..
T Consensus        64 ~~~nla~~y~k~-----~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~  131 (170)
T d1p5qa1          64 SHLNLAMCHLKL-----QAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKA  131 (170)
T ss_dssp             HHHHHHHHHHHT-----TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHH
T ss_pred             HHHHHHHHHHHH-----HHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_conf             999999998864-----21101100000001002231034677799998722299999999999972989899


No 40 
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Probab=97.58  E-value=0.00031  Score=42.77  Aligned_cols=53  Identities=11%  Similarity=-0.028  Sum_probs=22.3

Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH
Q ss_conf             99999999999829999899999999997288971289999999850998899
Q 000330         1015 KKALSLLSRALEADPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYA 1067 (1652)
Q Consensus      1015 dAALdLLsrALEINPtSaelWy~Ll~lY~~~~~~eea~emlekAVelnP~NY~ 1067 (1652)
                      +.|+..+..||+++|+++.+|+.++..|..++...++...|++|++++|+|-.
T Consensus        84 ~~Al~~~~~al~~~p~~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~  136 (153)
T d2fbna1          84 PKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLD  136 (153)
T ss_dssp             HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHH
T ss_pred             CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHH
T ss_conf             01110100010000000124677689999968999999999999982989899


No 41 
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.45  E-value=0.00023  Score=43.63  Aligned_cols=38  Identities=13%  Similarity=0.176  Sum_probs=19.3

Q ss_pred             HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf             999999998520498999999999971102770899999989
Q 000330         1390 GYLNLSLHRLLQNDWNEARLAIDAALKAAASEHFKHCVREHA 1431 (1652)
Q Consensus      1390 alLGD~Lyq~Lqg~~~EAfaAYDKALkanp~N~~i~cLNNYA 1431 (1652)
                      -.||.+|++  .|++++|...|++||+.+|++  ..+++.-.
T Consensus        76 ~~Lg~~y~~--~g~~~~A~~~~~~aL~~~P~~--~~A~~l~~  113 (122)
T d1nzna_          76 FYLAVGNYR--LKEYEKALKYVRGLLQTEPQN--NQAKELER  113 (122)
T ss_dssp             HHHHHHHHH--TTCHHHHHHHHHHHHHHCTTC--HHHHHHHH
T ss_pred             HHHHHHHHH--HHHHHHHHHHHHHHHHHCCCC--HHHHHHHH
T ss_conf             999999999--731699999999999769098--99999999


No 42 
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]}
Probab=97.37  E-value=0.00069  Score=40.39  Aligned_cols=61  Identities=16%  Similarity=0.110  Sum_probs=30.9

Q ss_pred             HHHHHHHCCHHHHHHHHHHHHHHCCCCHHH--HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC
Q ss_conf             999997139799999999999939984148--98999985102687509999999982999983
Q 000330         1250 IWCMAVLNGLECSMNLLEKYIKLYPSCLEL--VLMKARLQKHDFGDLSSVGFEEALIKWPKGVP 1311 (1652)
Q Consensus      1250 Ir~lI~LEDse~A~~LfdklLk~~P~dveL--~L~AAyL~~K~m~~~Aisvle~AL~~~PkNa~ 1311 (1652)
                      ..|+..+++...|+..|.++++..|.++..  .+.-+|+.+++ -.+|+..|+.++.++|+|..
T Consensus        71 a~~~~~l~~~~~Ai~~~~~al~l~p~~~~a~~~~~~~~~~l~~-~~~A~~~~~~al~l~P~n~~  133 (168)
T d1kt1a1          71 AMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNE-FESAKGDFEKVLEVNPQNKA  133 (168)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHSCTTCHH
T ss_pred             HHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHCCCCHH
T ss_conf             9998776220110002232220131048899988999988278-99999999999985989899


No 43 
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.22  E-value=0.0018  Score=37.69  Aligned_cols=93  Identities=6%  Similarity=0.011  Sum_probs=42.8

Q ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH----HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHH
Q ss_conf             9999999997288971289999999850998899----999998358976641235999999999862039999301212
Q 000330         1034 LWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYA----LWLMYINSRTPLNHRLDAYDAALSVLCRCASASDGDEMHASA 1109 (1652)
Q Consensus      1034 lWy~Ll~lY~~~~~~eea~emlekAVelnP~NY~----LwlmYInsr~slddrl~~YdkAI~vLe~las~~~~Dr~~~Sa 1109 (1652)
                      .+..++..|+..++-.++..+|.+|++++|.+..    ++..|...+        .|++|+..+.++.... +.....-.
T Consensus         6 ~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~~~~~~~~~a~~~~~~~--------~~~~A~~~~~~al~l~-~~~~~~~~   76 (128)
T d1elra_           6 KEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKG--------DYNKCRELCEKAIEVG-RENREDYR   76 (128)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT--------CHHHHHHHHHHHHHHH-HHSTTCHH
T ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC--------CHHHHHHHHHHHHHHC-CCCHHHHH
T ss_conf             99999999998599999999999998849645899986889998818--------6077899999999868-01278898


Q ss_pred             HHHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf             03799999999987706899999999
Q 000330         1110 CILDLFLQMLQCFCMSGNTEKAIQRI 1135 (1652)
Q Consensus      1110 ~iLDILL~LvqLY~qSGnydKAI~tl 1135 (1652)
                      .+-.++..+.+.+...+++++||..+
T Consensus        77 ~~a~~~~~lg~~~~~~~~~~~A~~~~  102 (128)
T d1elra_          77 QIAKAYARIGNSYFKEEKYKDAIHFY  102 (128)
T ss_dssp             HHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf             89999999999999938899999999


No 44 
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]}
Probab=97.13  E-value=0.00085  Score=39.81  Aligned_cols=53  Identities=9%  Similarity=-0.147  Sum_probs=31.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCCHH------------HHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf             5445599999999999982999989------------9999999997288971289999999850
Q 000330         1009 NKLEGMKKALSLLSRALEADPTSEI------------LWITYLLIFYSNTNSVGKDDMFSYSVKH 1061 (1652)
Q Consensus      1009 n~~g~ydAALdLLsrALEINPtSae------------lWy~Ll~lY~~~~~~eea~emlekAVel 1061 (1652)
                      ...|+|+.|+..|.++|+++|+.+.            +|..++..|..+++-.++...+++|+++
T Consensus        20 ~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~   84 (156)
T d2hr2a1          20 LVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHY   84 (156)
T ss_dssp             HHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             HHCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
T ss_conf             98599999999999999868442010200121027999999999999828630015766435530


No 45 
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.82  E-value=0.01  Score=32.51  Aligned_cols=84  Identities=12%  Similarity=0.077  Sum_probs=57.8

Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             99999999973994799999999999650102561112011102689999999999985222233221135779999999
Q 000330         1317 WNQYVEYALQNGRHDFAAELMDRWFHSVWKVQYSQVEISDPLVADMSHSSPESTSTSDPEFSVSNRNQMDVMFGYLNLSL 1396 (1652)
Q Consensus      1317 W~QLIq~al~~~n~d~ai~L~~~ff~gia~~Q~~~deALDaLrkgns~i~~es~s~~vSDfy~~~~~q~d~~falLGD~L 1396 (1652)
                      ++++...+.+.++++.|+...++.+.              ........      .....+.|           -.||.++
T Consensus         8 c~~lG~~~~~~g~y~~A~~~~~~Al~--------------~~~~~~~~------~~~~~~~l-----------~~Lg~~~   56 (95)
T d1tjca_           8 SFELGKVAYTEADYYHTELWMEQALR--------------QLDEGEIS------TIDKVSVL-----------DYLSYAV   56 (95)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHH--------------HHHTTCCC------SSCHHHHH-----------HHHHHHH
T ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHH--------------HHHHHHCC------CCCHHHHH-----------HHHHHHH
T ss_conf             99999999997799999999999999--------------88653014------76478999-----------9872688


Q ss_pred             HHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf             985204989999999999711027708999999898881
Q 000330         1397 HRLLQNDWNEARLAIDAALKAAASEHFKHCVREHAMLLL 1435 (1652)
Q Consensus      1397 yq~Lqg~~~EAfaAYDKALkanp~N~~i~cLNNYAYFLS 1435 (1652)
                      ++  .|++++|...|++||+.+|.+  ..+++|.++|-.
T Consensus        57 ~~--~g~~~~A~~~y~~aL~l~P~~--~~a~~Nl~~~~~   91 (95)
T d1tjca_          57 YQ--QGDLDKALLLTKKLLELDPEH--QRANGNLKYFEY   91 (95)
T ss_dssp             HH--TTCHHHHHHHHHHHHHHCTTC--HHHHHHHHHHHH
T ss_pred             HH--CCCHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHH
T ss_conf             86--577398887887798869297--999999999999


No 46 
>d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.70  E-value=0.015  Score=31.45  Aligned_cols=117  Identities=12%  Similarity=-0.026  Sum_probs=78.8

Q ss_pred             HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf             99999999873003554455999999999999829999899999999997288971289999999850998899999998
Q 000330          994 EQCVEMALLILNQDANKLEGMKKALSLLSRALEADPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYALWLMYI 1073 (1652)
Q Consensus       994 elWLelAl~~Lnq~~n~~g~ydAALdLLsrALEINPtSaelWy~Ll~lY~~~~~~eea~emlekAVelnP~NY~LwlmYI 1073 (1652)
                      +.++..+.....     .|+++.|...|.+||++.|...-.++.........  .......+..|.      ..++..|.
T Consensus        12 ~~~~~~g~~~~~-----~g~~e~A~~~~~~AL~l~rG~~l~~~~~~~w~~~~--r~~l~~~~~~a~------~~la~~~~   78 (179)
T d2ff4a2          12 VAEKTAGVHAAA-----AGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPF--ATALVEDKVLAH------TAKAEAEI   78 (179)
T ss_dssp             HHHHHHHHHHHH-----TTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHH--HHHHHHHHHHHH------HHHHHHHH
T ss_pred             HHHHHHHHHHHH-----CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH--HHHHHHHHHHHH------HHHHHHHH
T ss_conf             999999999998-----87999999999999863861311257631899999--999999999999------99999998


Q ss_pred             HCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
Q ss_conf             358976641235999999999862039999301212037999999999877068999999999630
Q 000330         1074 NSRTPLNHRLDAYDAALSVLCRCASASDGDEMHASACILDLFLQMLQCFCMSGNTEKAIQRISRLL 1139 (1652)
Q Consensus      1074 nsr~slddrl~~YdkAI~vLe~las~~~~Dr~~~Sa~iLDILL~LvqLY~qSGnydKAI~tl~rLE 1139 (1652)
                      ..+        .|+.|+..+.++...+ |..       .+.+..++.+|...|++..|+..+.++.
T Consensus        79 ~~g--------~~~~Al~~~~~al~~~-P~~-------e~~~~~l~~al~~~Gr~~eAl~~y~~~~  128 (179)
T d2ff4a2          79 ACG--------RASAVIAELEALTFEH-PYR-------EPLWTQLITAYYLSDRQSDALGAYRRVK  128 (179)
T ss_dssp             HTT--------CHHHHHHHHHHHHHHS-TTC-------HHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred             HCC--------CCHHHHHHHHHHHHHC-CCC-------HHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf             879--------9057899999999849-851-------9999999999998557999999999999


No 47 
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]}
Probab=96.44  E-value=0.012  Score=32.00  Aligned_cols=130  Identities=10%  Similarity=-0.016  Sum_probs=81.3

Q ss_pred             HHCCHHHHHHHHHHHHHHCCCCHHH-HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHH
Q ss_conf             7139799999999999939984148-989999851026875099999999829999833789999999999973994799
Q 000330         1255 VLNGLECSMNLLEKYIKLYPSCLEL-VLMKARLQKHDFGDLSSVGFEEALIKWPKGVPGIQCIWNQYVEYALQNGRHDFA 1333 (1652)
Q Consensus      1255 ~LEDse~A~~LfdklLk~~P~dveL-~L~AAyL~~K~m~~~Aisvle~AL~~~PkNa~g~~caW~QLIq~al~~~n~d~a 1333 (1652)
                      ..++.+.++..+.+.++..|.++++ ..++..+...+-.++|+..|+.++...|+...    +|..|.......+.    
T Consensus         8 ~~G~l~eAl~~l~~al~~~P~d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~----~~~~l~~ll~a~~~----   79 (264)
T d1zbpa1           8 SEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLP----GASQLRHLVKAAQA----   79 (264)
T ss_dssp             TTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHH----HHHHHHHHHHHHHH----
T ss_pred             HCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHH----HHHHHHHHHHHCCC----
T ss_conf             8889999999999999978999999999999999879999999999999986997389----99999999983466----


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf             99999999965010256111201110268999999999998522223322113577999999998520498999999999
Q 000330         1334 AELMDRWFHSVWKVQYSQVEISDPLVADMSHSSPESTSTSDPEFSVSNRNQMDVMFGYLNLSLHRLLQNDWNEARLAIDA 1413 (1652)
Q Consensus      1334 i~L~~~ff~gia~~Q~~~deALDaLrkgns~i~~es~s~~vSDfy~~~~~q~d~~falLGD~Lyq~Lqg~~~EAfaAYDK 1413 (1652)
                                       ..++....+.......+       .+..         ...+....+..  .|+.++|...+++
T Consensus        80 -----------------~~~a~~~~~~~~~~~~p-------~~~~---------~~l~~a~~~~~--~gd~~~A~~~~~~  124 (264)
T d1zbpa1          80 -----------------RKDFAQGAATAKVLGEN-------EELT---------KSLVSFNLSMV--SQDYEQVSELALQ  124 (264)
T ss_dssp             -----------------HHHHTTSCCCEECCCSC-------HHHH---------HHHHHHHHHHH--HTCHHHHHHHHHH
T ss_pred             -----------------CHHHHHHHHHHHCCCCC-------HHHH---------HHHHHHHHHHH--CCCHHHHHHHHHH
T ss_conf             -----------------37899875444203586-------4799---------99999999996--7998999999999


Q ss_pred             HHHHCCCCCHHHHHHH
Q ss_conf             9711027708999999
Q 000330         1414 ALKAAASEHFKHCVRE 1429 (1652)
Q Consensus      1414 ALkanp~N~~i~cLNN 1429 (1652)
                      ++...|..  -..|++
T Consensus       125 a~e~~p~~--~~~~~~  138 (264)
T d1zbpa1         125 IEELRQEK--GFLAND  138 (264)
T ss_dssp             HHHHCCCC--CEEETT
T ss_pred             HHHCCCCC--CCCCCC
T ss_conf             98339999--810015


No 48 
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.24  E-value=0.012  Score=32.13  Aligned_cols=73  Identities=8%  Similarity=-0.011  Sum_probs=53.0

Q ss_pred             CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
Q ss_conf             10899999999873003554455999999999999829999-------89999999999728897128999999985099
Q 000330          991 LSNEQCVEMALLILNQDANKLEGMKKALSLLSRALEADPTS-------EILWITYLLIFYSNTNSVGKDDMFSYSVKHNE 1063 (1652)
Q Consensus       991 ~d~elWLelAl~~Lnq~~n~~g~ydAALdLLsrALEINPtS-------aelWy~Ll~lY~~~~~~eea~emlekAVelnP 1063 (1652)
                      +..+-|.++...+..+     |+|+.|...|..||+++|..       +.++..++..|++.++-.++.+++++|++++|
T Consensus         3 Lsaddc~~lG~~~~~~-----g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P   77 (95)
T d1tjca_           3 LTAEDSFELGKVAYTE-----ADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDP   77 (95)
T ss_dssp             CCHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred             CCHHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
T ss_conf             5699999999999997-----79999999999999988653014764789999872688865773988878877988692


Q ss_pred             CCHHH
Q ss_conf             88999
Q 000330         1064 GSYAL 1068 (1652)
Q Consensus      1064 ~NY~L 1068 (1652)
                      ++...
T Consensus        78 ~~~~a   82 (95)
T d1tjca_          78 EHQRA   82 (95)
T ss_dssp             TCHHH
T ss_pred             CCHHH
T ss_conf             97999


No 49 
>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.18  E-value=0.013  Score=31.84  Aligned_cols=77  Identities=5%  Similarity=0.037  Sum_probs=67.3

Q ss_pred             CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHH
Q ss_conf             0108999999998730035544559999999999998299998-999999999972889712899999998509988999
Q 000330          990 ELSNEQCVEMALLILNQDANKLEGMKKALSLLSRALEADPTSE-ILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGSYAL 1068 (1652)
Q Consensus       990 ~~d~elWLelAl~~Lnq~~n~~g~ydAALdLLsrALEINPtSa-elWy~Ll~lY~~~~~~eea~emlekAVelnP~NY~L 1068 (1652)
                      -...|..+.+|...+.+.  ..++.+.|..+|..++..+|... ++||.++..|+++++-+.+..+|+++++..|+|-.-
T Consensus        32 ~~s~qt~F~YAw~Lv~S~--~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA  109 (124)
T d2pqrb1          32 TATIQSRFNYAWGLIKST--DVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQV  109 (124)
T ss_dssp             GSCHHHHHHHHHHHHHSS--CHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred             CCCCCHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf             988101999999998279--688999999999999854950599999999999998732999999999998239984999


No 50 
>d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.16  E-value=0.031  Score=29.37  Aligned_cols=24  Identities=13%  Similarity=0.127  Sum_probs=11.1

Q ss_pred             HHHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf             999999999973994799999999
Q 000330         1316 IWNQYVEYALQNGRHDFAAELMDR 1339 (1652)
Q Consensus      1316 aW~QLIq~al~~~n~d~ai~L~~~ 1339 (1652)
                      +|..+++.....++++.++..+++
T Consensus        69 a~~~la~~~~~~g~~~~Al~~~~~   92 (179)
T d2ff4a2          69 AHTAKAEAEIACGRASAVIAELEA   92 (179)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf             999999999887990578999999


No 51 
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]}
Probab=94.59  E-value=0.1  Score=25.92  Aligned_cols=25  Identities=8%  Similarity=0.065  Sum_probs=12.1

Q ss_pred             HHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf             9999999998770689999999996
Q 000330         1113 DLFLQMLQCFCMSGNTEKAIQRISR 1137 (1652)
Q Consensus      1113 DILL~LvqLY~qSGnydKAI~tl~r 1137 (1652)
                      .++..+..+|...|+++.||..+.+
T Consensus       101 ~a~~~~g~~~~~lg~~eeA~~~~~~  125 (156)
T d2hr2a1         101 SAVYSRALALDGLGRGAEAMPEFKK  125 (156)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             8775269999988888888999999


No 52 
>d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]}
Probab=86.63  E-value=0.65  Score=20.53  Aligned_cols=95  Identities=11%  Similarity=0.177  Sum_probs=47.3

Q ss_pred             HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH----CCCCCHHHHHHHHHHHHCCCCHH--
Q ss_conf             999999998730035544559999999999998299998999999999972----88971289999999850998899--
Q 000330          994 EQCVEMALLILNQDANKLEGMKKALSLLSRALEADPTSEILWITYLLIFYS----NTNSVGKDDMFSYSVKHNEGSYA-- 1067 (1652)
Q Consensus       994 elWLelAl~~Lnq~~n~~g~ydAALdLLsrALEINPtSaelWy~Ll~lY~~----~~~~eea~emlekAVelnP~NY~-- 1067 (1652)
                      +.|+.++..+.++     +++..|+..|.++.+.  .++.+++.++.+|..    .+....+...+++|++..-....  
T Consensus         3 ~~~~~lG~~~~~~-----~d~~~A~~~~~kAa~~--g~~~A~~~Lg~~y~~G~~~~~d~~~a~~~~~~a~~~~~~~a~~~   75 (265)
T d1ouva_           3 KELVGLGAKSYKE-----KDFTQAKKYFEKACDL--KENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHL   75 (265)
T ss_dssp             HHHHHHHHHHHHT-----TCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             HHHHHHHHHHHHC-----CCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHC
T ss_conf             9999999999987-----7999999999999978--99999999999998099960569999875012221111112313


Q ss_pred             HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf             99999835897664123599999999986203
Q 000330         1068 LWLMYINSRTPLNHRLDAYDAALSVLCRCASA 1099 (1652)
Q Consensus      1068 LwlmYInsr~slddrl~~YdkAI~vLe~las~ 1099 (1652)
                      |+.++.... ....   .++.|+..|......
T Consensus        76 l~~~~~~~~-~~~~---~~~~a~~~~~~a~~~  103 (265)
T d1ouva_          76 LGNLYYSGQ-GVSQ---NTNKALQYYSKACDL  103 (265)
T ss_dssp             HHHHHHHTS-SSCC---CHHHHHHHHHHHHHT
T ss_pred             CCCCCCCCC-CCCH---HHHHHHHHHHHHHHH
T ss_conf             501224321-1212---367798887655432


No 53 
>d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]}
Probab=79.68  E-value=1.2  Score=18.71  Aligned_cols=104  Identities=18%  Similarity=0.128  Sum_probs=60.2

Q ss_pred             HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC--HHHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf             559999999999998299998999999999972889712899999998509988--999999983589766412359999
Q 000330         1012 EGMKKALSLLSRALEADPTSEILWITYLLIFYSNTNSVGKDDMFSYSVKHNEGS--YALWLMYINSRTPLNHRLDAYDAA 1089 (1652)
Q Consensus      1012 g~ydAALdLLsrALEINPtSaelWy~Ll~lY~~~~~~eea~emlekAVelnP~N--Y~LwlmYInsr~slddrl~~YdkA 1089 (1652)
                      .+++.|+..|.++.+.+  .+.+++.++..  ...+...+..++++|++..-..  +.|+.||.+-...-    .++.+|
T Consensus         7 kd~~~A~~~~~kaa~~g--~~~a~~~l~~~--~~~~~~~a~~~~~~aa~~g~~~a~~~Lg~~y~~g~~~~----~d~~~A   78 (133)
T d1klxa_           7 KDLKKAIQYYVKACELN--EMFGCLSLVSN--SQINKQKLFQYLSKACELNSGNGCRFLGDFYENGKYVK----KDLRKA   78 (133)
T ss_dssp             HHHHHHHHHHHHHHHTT--CTTHHHHHHTC--TTSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCSSSC----CCHHHH
T ss_pred             CCHHHHHHHHHHHHHCC--CHHHHHHHCCC--CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC----HHHHHH
T ss_conf             69999999999999879--91545654101--12389999998765411331255556787533013531----035788


Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH----HCCHHHHHH
Q ss_conf             99999862039999301212037999999999877----068999999
Q 000330         1090 LSVLCRCASASDGDEMHASACILDLFLQMLQCFCM----SGNTEKAIQ 1133 (1652)
Q Consensus      1090 I~vLe~las~~~~Dr~~~Sa~iLDILL~LvqLY~q----SGnydKAI~ 1133 (1652)
                      +..|.+.+...  +        .+..+.|..+|..    ..|+.+|+.
T Consensus        79 ~~~~~~aa~~g--~--------~~a~~~Lg~~y~~G~gv~~d~~~A~~  116 (133)
T d1klxa_          79 AQYYSKACGLN--D--------QDGCLILGYKQYAGKGVVKNEKQAVK  116 (133)
T ss_dssp             HHHHHHHHHTT--C--------HHHHHHHHHHHHHTSSSCCCHHHHHH
T ss_pred             HHHHHHHHCCC--C--------CHHHHHHHHHHHCCCCCCCCHHHHHH
T ss_conf             88875000257--4--------06778999999829846778999999


No 54 
>d2cqea1 g.66.1.1 (A:458-513) Zinc finger CCCH domain-containing protein C19orf7 (KIAA1064) {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.77  E-value=3.1  Score=15.97  Aligned_cols=19  Identities=32%  Similarity=0.773  Sum_probs=15.4

Q ss_pred             EEECCCC-CC-CCCCCCHHHH
Q ss_conf             0001345-43-6999850343
Q 000330          841 CMYELRG-KC-NNDECPWQHV  859 (1652)
Q Consensus       841 C~fel~G-~C-Nd~~C~wQH~  859 (1652)
                      |+|=.+| +| ++|+|.+.|.
T Consensus         3 CK~yHtg~kCy~gd~C~FSH~   23 (56)
T d2cqea1           3 CKLYHTTGNCINGDDCMFSHD   23 (56)
T ss_dssp             CSHHHHTSCCSSCTTCSSBCC
T ss_pred             CCEEECCCCCCCCCCCCCCCC
T ss_conf             614545872048996401278


Done!