BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000332
(1651 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9UIF8|BAZ2B_HUMAN Bromodomain adjacent to zinc finger domain protein 2B OS=Homo sapiens
GN=BAZ2B PE=1 SV=3
Length = 2168
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 107/252 (42%), Gaps = 62/252 (24%)
Query: 274 MEKKRKCDEARIAREVE-------ANEIRIQKE----LERQDNLRRKNEERMRKEMEKH- 321
+ K +K ++AR+A+E + A E R QKE +++Q+ ++R + RM KE+
Sbjct: 904 LRKLQKQEQARVAKEAKKQQAIMAAEEKRKQKEQIKIMKQQEKIKRIQQIRMEKELRAQQ 963
Query: 322 -------------------------ERERRKEEERLMRERQREEERSLREQKREMERREK 356
E+E R+++ L++ ++RE R + ME R+K
Sbjct: 964 ILEAKKKKKEEAANAKLLEAEKRIKEKEMRRQQAVLLKHQERERRRQHMMLMKAMEARKK 1023
Query: 357 FLQKEYLRAEKR---RLKEELRMEKQAAKRKVAIEKATARKMAKESMDLIEDEQLELMDL 413
+KE L+ EKR RL +E ++E +R++ +E A K E M L + + L
Sbjct: 1024 AEEKERLKQEKRDEKRLNKERKLE----QRRLELEMAKELKKPNEDMCLADQKPLP---- 1075
Query: 414 AAASKGLSSIIHLDLETLQNLDSFRDSLSVFPPKTVRLKRPFSVQPWSDSEENVGNLLMV 473
L I L L +F D L V V+ R F D +V NL ++
Sbjct: 1076 -----ELPRIPGLVLSG----STFSDCLMV-----VQFLRNFGKVLGFDVNIDVPNLSVL 1121
Query: 474 WRFFITFADVLG 485
+ D +G
Sbjct: 1122 QEGLLNIGDSMG 1133
>sp|Q8IDX6|RBP2A_PLAF7 Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum
(isolate 3D7) GN=PF13_0198 PE=3 SV=1
Length = 3130
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 65/103 (63%), Gaps = 16/103 (15%)
Query: 297 QKELERQDNLRRKNEERMRKE----MEKHERERRKEEERLMRER----------QREEER 342
Q+ L++++ L+R+ +ER+ +E ++K E +R+E+ERL +E Q+EEE
Sbjct: 2744 QERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEEL 2803
Query: 343 SLREQKR-EMERREKFLQKEYL-RAEKRRLKEELRMEKQAAKR 383
+EQ+R E E++E+ ++E L R E+ RL++E +++Q +R
Sbjct: 2804 KRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQER 2846
>sp|Q1MTN9|RLF2_SCHPO Chromatin assembly factor 1 subunit rlf2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=rlf2 PE=3 SV=2
Length = 544
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 20/136 (14%)
Query: 266 FNNDAEQRMEKK---RKCDEARIAREVEANEIRIQKELERQDNLRRKNEERMRKEMEKHE 322
+N AE EKK ++ E RI R+ EA R+++E ERQ +R+ E+++R E EK
Sbjct: 68 YNGSAEAGKEKKLQKQRAQEERI-RQKEAE--RLKREKERQ---QREQEKKLR-EQEKIA 120
Query: 323 RERRKEEERLMRERQREEERSLREQKREMERREKFLQKEYLRAEKRRLKEE--LRMEKQA 380
++ KE E+L +ER R +E +Q+R+ ER +K +KE E +RL++E L E+Q
Sbjct: 121 AKKMKELEKLEKERIRLQE----QQRRKEERDQKLREKE----EAQRLRQEQILNKERQQ 172
Query: 381 AKRKVAIEKATARKMA 396
K K +++A
Sbjct: 173 LKLNNFFTKGVEKRIA 188
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 63/105 (60%), Gaps = 14/105 (13%)
Query: 319 EKHERE-------RRKEEERLMRER---QREEERSLREQKREMERREKFLQKEYLRAEKR 368
+K +++ R+KE ERL RE+ QRE+E+ LREQ++ ++ K L+K L E+
Sbjct: 78 KKLQKQRAQEERIRQKEAERLKREKERQQREQEKKLREQEKIAAKKMKELEK--LEKERI 135
Query: 369 RLKEELRMEKQAAKRKVAIEKATARKMAKESMDLIEDEQLELMDL 413
RL+E+ R +++ ++ EK A+++ +E + E +QL+L +
Sbjct: 136 RLQEQQRRKEERDQK--LREKEEAQRLRQEQILNKERQQLKLNNF 178
>sp|B2ZX90|FAS1_ORYSJ Chromatin assembly factor 1 subunit FSM OS=Oryza sativa subsp.
japonica GN=FSM PE=2 SV=1
Length = 940
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 12/90 (13%)
Query: 297 QKELERQDNLRRKNEERMRKEMEKHERERRKEEERLMRERQREEERSLREQKREMERREK 356
Q+E R+ R K E M+K+ K E E +KE++R R++EE + ++QK++ E EK
Sbjct: 363 QEEALREQKRREKEEAEMKKQQRKQEEEAQKEQKR----REKEEAETRKQQKKQQEEAEK 418
Query: 357 FLQKEYLRAEKRRLKEELRMEKQAAKRKVA 386
+KRR KE ++++KQ A +K A
Sbjct: 419 --------EQKRREKEAVQLKKQLAIQKQA 440
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 70/110 (63%), Gaps = 7/110 (6%)
Query: 299 ELERQDNLRRKNEERMRKEMEKHERERRKEEERLMRERQREEERSLREQKR------EME 352
+L++ + K+ ++ +K++EK +++ KEE R+ +++++++E +LREQKR EM+
Sbjct: 322 QLQKNTSTNEKDTQKAQKQVEKELKQKEKEEARMRKQQKKQQEEALREQKRREKEEAEMK 381
Query: 353 RREKFLQKEYLRAEKRRLKEELRMEKQAAKRKVAIEKATARKMAKESMDL 402
++++ ++E + +KRR KEE KQ K++ EK R+ KE++ L
Sbjct: 382 KQQRKQEEEAQKEQKRREKEEAETRKQQKKQQEEAEKEQKRR-EKEAVQL 430
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 74/120 (61%), Gaps = 11/120 (9%)
Query: 281 DEARIAREVEANEI---RIQKELERQDNLRRKNEERMRKEMEKH------ERERRKEEER 331
D++++ + NE + QK++E++ + K E RMRK+ +K E++RR++EE
Sbjct: 319 DDSQLQKNTSTNEKDTQKAQKQVEKELKQKEKEEARMRKQQKKQQEEALREQKRREKEEA 378
Query: 332 LMRERQREEERSLREQKREMERREKFLQKEYLRAEKRRLKEELRMEKQAA--KRKVAIEK 389
M+++QR++E +++++ E+ E +K+ + ++ KE+ R EK+A K+++AI+K
Sbjct: 379 EMKKQQRKQEEEAQKEQKRREKEEAETRKQQKKQQEEAEKEQKRREKEAVQLKKQLAIQK 438
>sp|A2R7P5|NST1_ASPNC Stress response protein nst1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=nst1 PE=3 SV=1
Length = 1201
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 25/110 (22%)
Query: 275 EKKRKCDEARIAREVEANEIRIQKELERQDNLRRKNE-ERMRKEMEKHERERRKEEERLM 333
E++RK +E + RE E R+ E ER+RKE EK +R R +
Sbjct: 593 EQRRKREEQKKKREAE----------------RKAQEAERLRKEAEKQKRLREE------ 630
Query: 334 RERQREEERSLREQKR-EMERREKFLQKEYLRAEKRRLKEELRMEKQAAK 382
RERQ E ER REQK E +RRE+ Q E LR +K + + E ++ + A K
Sbjct: 631 RERQAEIERKQREQKELEKKRREEARQNE-LREKKTKDERERKLREAAPK 679
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 271 EQRMEKKRKCDEARIAREVEANEIRIQKELERQDNLRRKNEERMRKEMEKHERERRKEEE 330
+++ E +RK EA R+ + R+++E ERQ + RK +R +KE+EK RE ++ E
Sbjct: 602 KKKREAERKAQEAERLRKEAEKQKRLREERERQAEIERK--QREQKELEKKRREEARQNE 659
Query: 331 RLMRERQREEERSLRE--QKREMERREK 356
++ + E ER LRE K + E +EK
Sbjct: 660 LREKKTKDERERKLREAAPKTDYEGQEK 687
>sp|P46504|YLX8_CAEEL Uncharacterized protein F23F12.8 OS=Caenorhabditis elegans
GN=F23F12.8 PE=4 SV=2
Length = 980
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 28/134 (20%)
Query: 273 RMEKKRKCDEARIAREVEANEIRIQKELERQDNL----------RRKNEERMRKEMEKHE 322
R EK+ K E R++E +E Q EL+RQ + R + ER+R E +K E
Sbjct: 326 RQEKEEKARELERRRKLEESETARQAELDRQATIYAEQERMAMERNRELERIRLEEKKRE 385
Query: 323 RERRKEE------------ERLMRERQREEER------SLREQKREMERREKFLQKEYLR 364
ER ++E ERL ERQR+ ER + R+ K + E R++ +Q++ +
Sbjct: 386 NERVRQEEIAMEISKIRELERLQLERQRKNERVRQELEAARKYKLQEEERQRKIQQQKVE 445
Query: 365 AEKRRLKEELRMEK 378
E+ R +EE R E+
Sbjct: 446 MEQIRQQEEARQEQ 459
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 13/98 (13%)
Query: 273 RMEKKRKCDEARIAREVEANEIRIQKELERQDNLRRKNEERMRKEMEKHERERRKEEERL 332
R+E+K++ +E R+ +E A EI +ELER R++ ER+R+E+E + + +EEER
Sbjct: 378 RLEEKKRENE-RVRQEEIAMEISKIRELERLQLERQRKNERVRQELEAARKYKLQEEER- 435
Query: 333 MRERQREEERSLREQKREMERREKFLQKEYLRAEKRRL 370
+R +++QK EM E+ Q+E R E+ R+
Sbjct: 436 --------QRKIQQQKVEM---EQIRQQEEARQEQLRV 462
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 95/175 (54%), Gaps = 10/175 (5%)
Query: 241 RKNAQSTSHPIFGTEDPYLLSDGQTFNNDAEQRMEKKRKCDEARIAREVE--ANEIRIQK 298
R N Q+ + F + +++ +T + +Q EK K ++ R+ +E E A E+ ++
Sbjct: 283 RYNGQTMTENEFLNQLLHIVQHQKTVSERQQQ--EKFEKMEQERLRQEKEEKARELERRR 340
Query: 299 ELERQDNLRRKNEER---MRKEMEKHERERRKEEERL-MRERQREEERSLREQKREMERR 354
+LE + R+ +R + E E+ ER +E ER+ + E++RE ER +R+++ ME
Sbjct: 341 KLEESETARQAELDRQATIYAEQERMAMERNRELERIRLEEKKRENER-VRQEEIAME-I 398
Query: 355 EKFLQKEYLRAEKRRLKEELRMEKQAAKRKVAIEKATARKMAKESMDLIEDEQLE 409
K + E L+ E++R E +R E +AA++ E+ RK+ ++ +++ + Q E
Sbjct: 399 SKIRELERLQLERQRKNERVRQELEAARKYKLQEEERQRKIQQQKVEMEQIRQQE 453
>sp|Q20497|MED12_CAEEL Mediator of RNA polymerase II transcription subunit 12
OS=Caenorhabditis elegans GN=dpy-22 PE=1 SV=2
Length = 3498
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 301 ERQDNLRRKNEERMRKEMEKHERERRKEEERLMRERQR--------EEERSLREQKREME 352
+R + LRR+ EER+RKE E+ R +R+ EER+ +E+ R ++E+E
Sbjct: 2624 QRLELLRRQEEERLRKEAEERMRIQRENEERVRQEQMRLEAEERERIRRAEEERIQKELE 2683
Query: 353 RREKFLQKEYLRAEKRRLKEELRM 376
+ + ++E R EK R ++E RM
Sbjct: 2684 DKVRREKEEAARQEKERQEQEARM 2707
>sp|Q9DE13|BAZ2B_CHICK Bromodomain adjacent to zinc finger domain protein 2B OS=Gallus
gallus GN=BAZ2B PE=2 SV=1
Length = 2130
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 20/80 (25%)
Query: 993 ERTVAVQDPSTGLDNLATQQHGYASKRSRSQLKAYIAHMAEEMYVYRSLPLGQDRRRNRY 1052
++TV+V++ ++ L QQ Y K + E + RS+ GQDR R RY
Sbjct: 1262 DQTVSVEELEKQIEKLTKQQSQYRKK------------LFEASHCLRSMMFGQDRYRRRY 1309
Query: 1053 WQFATSASRNDPCSGRIFVE 1072
W P G IFVE
Sbjct: 1310 WIL--------PQCGGIFVE 1321
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 23/123 (18%)
Query: 289 VEANEIRIQKELERQDNLRRKNEERMRKEMEKHERERRKEEERLMRERQREEERSLREQK 348
+EA + +KE+ RQ + K++E R ++ ERERR++ LM
Sbjct: 895 LEAEKRIKEKEMRRQQAVLLKHQELERHRLD-MERERRRQHMMLM--------------- 938
Query: 349 REMERREKFLQKEYLRAEKR---RLKEELRMEKQAAKRKVAIEKATARKMAKESMDLIED 405
+ ME R+K +KE L+ EKR RL +E ++E +R++ +E A K E M L +
Sbjct: 939 KAMEARKKAEEKERLKQEKRDEKRLNKERKLE----QRRLELEMAKELKKPNEDMCLADQ 994
Query: 406 EQL 408
+ L
Sbjct: 995 KAL 997
>sp|Q54Y06|Y8487_DICDI Probable cyclin-dependent serine/threonine-protein kinase
DDB_G0278487 OS=Dictyostelium discoideum GN=DDB_G0278487
PE=2 SV=1
Length = 636
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 41/60 (68%)
Query: 294 IRIQKELERQDNLRRKNEERMRKEMEKHERERRKEEERLMRERQREEERSLREQKREMER 353
++ Q+ L+RQ L+++ +E+ ++E+ K ++E+ + ++ E+QR+E+ LR ++E ER
Sbjct: 412 LKRQRLLKRQQELKKQQDEQRQQELIKKQQEQEQLRLKVEHEKQRQEQERLRLIQQEQER 471
>sp|Q8C1B1|CAMP2_MOUSE Calmodulin-regulated spectrin-associated protein 2 OS=Mus musculus
GN=Camsap2 PE=1 SV=3
Length = 1461
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 71/139 (51%), Gaps = 13/139 (9%)
Query: 292 NEIRIQKELERQDNLRRKNEERMRKEMEKHERERRKEEERLMRERQREEERSLREQKREM 351
N++ +++ + LRR+ E ++RK+ + E E +KE + + QK+E
Sbjct: 1145 NDMAMKRAALLEKRLRREKETQLRKQQLEAEMEHKKE--------ETRRKTEEERQKKED 1196
Query: 352 ER-REKFLQKEYLRAEKRRLKEEL----RMEKQAAKRKVAIEKATARKMAKESMDLIEDE 406
ER R +F+++EY+R ++ +L E++ + QAAK+K K+ R + I+
Sbjct: 1197 ERARREFIRQEYMRRKQLKLMEDMDTVIKPRPQAAKQKKQRPKSIHRDHIESPKTPIKGP 1256
Query: 407 QLELMDLAAASKGLSSIIH 425
+ + LA+ + G S +H
Sbjct: 1257 PVSSLSLASLNTGDSESVH 1275
>sp|A6RW62|NST1_BOTFB Stress response protein nst1 OS=Botryotinia fuckeliana (strain
B05.10) GN=nst1 PE=3 SV=1
Length = 1168
Score = 34.7 bits (78), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 15/77 (19%)
Query: 273 RMEKKRKCDEARIAREVEANEIRIQKELERQDNLRRKN-------EERMRKEMEKHERER 325
R + ++ +EA + RE+E + Q+ L+R++N ++K EER+RKE EK +R
Sbjct: 533 RKDAEKAAEEASL-REIEEKKAEAQR-LKREENRKKKEAQKKADEEERVRKESEK---QR 587
Query: 326 RKEEERLMRERQREEER 342
R +E+ RERQ E+ER
Sbjct: 588 RLQEQ---RERQAEQER 601
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 622,199,169
Number of Sequences: 539616
Number of extensions: 27947755
Number of successful extensions: 164648
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1301
Number of HSP's successfully gapped in prelim test: 2887
Number of HSP's that attempted gapping in prelim test: 102768
Number of HSP's gapped (non-prelim): 28589
length of query: 1651
length of database: 191,569,459
effective HSP length: 131
effective length of query: 1520
effective length of database: 120,879,763
effective search space: 183737239760
effective search space used: 183737239760
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 68 (30.8 bits)