BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000338
(1639 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255586806|ref|XP_002534017.1| conserved hypothetical protein [Ricinus communis]
gi|223525976|gb|EEF28365.1| conserved hypothetical protein [Ricinus communis]
Length = 1613
Score = 2730 bits (7076), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1367/1648 (82%), Positives = 1479/1648 (89%), Gaps = 44/1648 (2%)
Query: 1 MDQNQSQRSSIGAATASSASSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPFFN 60
MDQNQ SI A TA+S R YQF PARAAIIDLFNLYLGRSSRQK DDS R+PP
Sbjct: 1 MDQNQR---SIAATTAAS---RGYQFQPARAAIIDLFNLYLGRSSRQKHDDSTREPP--- 51
Query: 61 LRLLIRGLVACCGGILLIVEEFMLRNKTQKRVLALNRELPPRNEQFLIDFEQLQSQFPDQ 120
NKTQKRVLALNRELPPRNEQFLI+FEQLQSQFPDQ
Sbjct: 52 -------------------------NKTQKRVLALNRELPPRNEQFLINFEQLQSQFPDQ 86
Query: 121 DQLRSVTESVLISMVVQCCSHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEMS 180
DQLRSVTESVLIS+V+QCC+H PRAEF+LFALRSLCSIGYINWDTFLPSLLSSVSSAEMS
Sbjct: 87 DQLRSVTESVLISLVIQCCNHAPRAEFLLFALRSLCSIGYINWDTFLPSLLSSVSSAEMS 146
Query: 181 AGQGSQAMPAVSATSLQQSGMLPTSSGIPNSSNYQSSNPASPLPSVHGIGSPAQSAIETS 240
AGQ Q + A+S+ + Q+ +LP+SS IPNSSN+Q SNP SPL SVHGIGSP QSAIE S
Sbjct: 147 AGQAGQTVSAISSMNSSQNVILPSSSAIPNSSNFQPSNPTSPLASVHGIGSPVQSAIEPS 206
Query: 241 VCAAMSPVKSSDVSCTGQQFTTRVNSSVRDNAISSLRQLCCKIILTGLEFSLKPVTHADI 300
+ A +SPVKSSD+S GQ T+RVN S RDNAI+SLRQLCCKIILTGLEF+LKP TH++I
Sbjct: 207 LLATVSPVKSSDISGNGQPSTSRVNLSSRDNAINSLRQLCCKIILTGLEFNLKPATHSEI 266
Query: 301 FYHMLNWLVTWDQKQQGIDESDG-KSWRLDKALIEWLHSCLDVIWLLVDEDRCRVPFYEL 359
F+HMLNWLV WDQ+Q G+DESD +SWR +KALIEWL SCLDVIWLLVDE++CRVPFYEL
Sbjct: 267 FHHMLNWLVNWDQRQHGVDESDSVRSWRPEKALIEWLRSCLDVIWLLVDENKCRVPFYEL 326
Query: 360 LRTGLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTPNI 419
LR+GLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTPNI
Sbjct: 327 LRSGLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTPNI 386
Query: 420 SVEAAGNLRYSPITYPSVLGEPLHGEDLATSIQRGSLDWERAMRCIRHAIRATPSPDWWK 479
SVEAA NLRYSPITYPSVLGEPLHGEDLA SIQRGSLDWERA+RCIRHA+R TPSPDWWK
Sbjct: 387 SVEAAANLRYSPITYPSVLGEPLHGEDLANSIQRGSLDWERALRCIRHALRTTPSPDWWK 446
Query: 480 RVLLVAPCYRNPAQGPTPGAVFTYDMISEAVIDRIVELLKLTNSEVNCWHDWLIFSDVFF 539
RVLLVAP YRNPA GPTPGAVF MI EA IDRIVELLKLTNSEVNCW +WL+FSD+ F
Sbjct: 447 RVLLVAPSYRNPAHGPTPGAVFVSSMICEATIDRIVELLKLTNSEVNCWQEWLVFSDILF 506
Query: 540 FLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVET 599
FL+KSGCIDFVDFVDKLV+RL +GD HILRTNH+TWLLAQIIRVE+V+ AL +D+RKVET
Sbjct: 507 FLMKSGCIDFVDFVDKLVARLTEGDQHILRTNHMTWLLAQIIRVEIVVNALTTDARKVET 566
Query: 600 TRKILSFHREDRCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEW 659
TRKI+SFHREDR +DPNNPQSILLDFISSCQNLRIWSLNTSTREYLN+EQLQKGKQIDEW
Sbjct: 567 TRKIMSFHREDRSSDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNSEQLQKGKQIDEW 626
Query: 660 WRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTELFPGSNLPPN 719
WR V+KGDRM+DYMNMDDRS+GMFWVVSYTM+QPACETV+NWLSSAGV+EL G+++ N
Sbjct: 627 WRTVTKGDRMIDYMNMDDRSIGMFWVVSYTMSQPACETVVNWLSSAGVSEL-AGTSMQSN 685
Query: 720 ERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAPH 779
ERLMVMREVNPLP+SLL+G SLNLCLKL Q+EDS+F GQV+ SIAMVETY RL+L+APH
Sbjct: 686 ERLMVMREVNPLPISLLSGLSLNLCLKLVFQLEDSLFAGQVIPSIAMVETYCRLLLIAPH 745
Query: 780 SLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRLLPLYR-----YQGKTKTLMYDITKI 834
SLFRS FSHLAQR PSLL+K GVT LV EIVNYRLLPLYR YQGK+K+LMYD+TKI
Sbjct: 746 SLFRSHFSHLAQRYPSLLSKPGVTLLVFEIVNYRLLPLYRQEHVEYQGKSKSLMYDVTKI 805
Query: 835 ISALKVKRGDHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAIII 894
+S LK KRGDHRV RLAENLCMNLILS RDFFS+KREGKG TEFTETLNR+TVI LAIII
Sbjct: 806 VSTLKGKRGDHRVFRLAENLCMNLILSLRDFFSVKREGKGPTEFTETLNRVTVITLAIII 865
Query: 895 KTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQ 954
KTRGIADADH+LYLQTMLEQIMATSQHTWSEKTLRYFPSLL DAL GRIDKRGL IQ WQ
Sbjct: 866 KTRGIADADHLLYLQTMLEQIMATSQHTWSEKTLRYFPSLLHDALSGRIDKRGLAIQEWQ 925
Query: 955 QAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLR 1014
Q ETTVINQCTQLLSPSA+P YV TY++HSFPQHRQYLCAGAWILMQGHPENINS NL R
Sbjct: 926 QTETTVINQCTQLLSPSAEPAYVMTYINHSFPQHRQYLCAGAWILMQGHPENINSVNLAR 985
Query: 1015 VLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDI 1074
VLREFSPEEVTSNIYTMVDVLLH I +ELQ GHSLQDLL K CAN++FFV HELLPLDI
Sbjct: 986 VLREFSPEEVTSNIYTMVDVLLHRIQMELQHGHSLQDLLLKTCANLAFFVWGHELLPLDI 1045
Query: 1075 LLLALIDRDDDPHALRIVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALG 1134
LLLAL DRDDDPHALRIVI+LLDRQELQQRVKL+CMNRGPPEHWL+SG+FKR+ELQKALG
Sbjct: 1046 LLLALTDRDDDPHALRIVISLLDRQELQQRVKLFCMNRGPPEHWLFSGVFKRLELQKALG 1105
Query: 1135 NHLSWKERYPTFFDDIAARLLPVIPLIVYRLIENDAMDSADRVLATYSSFLAYYPLRFSF 1194
NHLSWK+RYPTFFDDIAARLLPVIPLIVYRL+ENDA+D ADRVLA YS FLAY+PLRF+F
Sbjct: 1106 NHLSWKDRYPTFFDDIAARLLPVIPLIVYRLVENDAIDPADRVLAMYSPFLAYHPLRFTF 1165
Query: 1195 VRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLGL 1254
VRDILAYFYGHLPGKLIVRILNV DLSKIPFSESFPQHISSSNPVMCPP +YFATLLLGL
Sbjct: 1166 VRDILAYFYGHLPGKLIVRILNVLDLSKIPFSESFPQHISSSNPVMCPPPEYFATLLLGL 1225
Query: 1255 VNNVIPALNYNSKSGSTMDA---SLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYT 1311
VNNV+P LN NSK GS D SLR P+ K+P TSQSGP+N+S+ +K FYQ QDPGTYT
Sbjct: 1226 VNNVLPPLNTNSKYGSLGDGLCNSLRNPNTKTPATSQSGPTNISDAQKAFYQIQDPGTYT 1285
Query: 1312 QLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSP 1371
QLVLETAVIE+LSLPV+ASQIVSSLVQIVVNIQPTLIQ+SNG +GASN GQGSVLPTSP
Sbjct: 1286 QLVLETAVIELLSLPVTASQIVSSLVQIVVNIQPTLIQSSNGLHGASNGAGQGSVLPTSP 1345
Query: 1372 SGGSTDSLGASRSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLY 1431
SGGSTDSLGASRS PSVSGINT++FVSRSGYTCQQLSCLLIQACGLLLAQLPPDFH+QLY
Sbjct: 1346 SGGSTDSLGASRSNPSVSGINTATFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHLQLY 1405
Query: 1432 MEASRIIKESWWLADGKRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNL 1491
MEASRIIKESWWL D KRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNL
Sbjct: 1406 MEASRIIKESWWLTDAKRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNL 1465
Query: 1492 PQEWLEGTHVIIKHLRPITSVAMLRIVFRIMGPLLPRLVNAHTLFNKTLALLLNTMGDVY 1551
PQEWLEGTH I+KHLRPITSVAMLRI FRIMGPLLPRL NAH+LFNKTL LLLNTM DV+
Sbjct: 1466 PQEWLEGTHAIVKHLRPITSVAMLRIAFRIMGPLLPRLANAHSLFNKTLLLLLNTMVDVF 1525
Query: 1552 GKNTLPPAPVEASEIADLIDFLHHVVHYEGQGGPVQASSKPRPEVLVLTGRAAESLRPEV 1611
G+N+ P PVEASEIADLIDFLHHV+HYEGQGGPVQA+SKPR EVL L GRAAESLRP++
Sbjct: 1526 GRNSQPSTPVEASEIADLIDFLHHVIHYEGQGGPVQANSKPRAEVLALCGRAAESLRPDI 1585
Query: 1612 QHLLSHLKPDVNSSIYAATHPKMVQNPS 1639
QHLLSHLKPDVNSSIYAATHPK+VQNPS
Sbjct: 1586 QHLLSHLKPDVNSSIYAATHPKLVQNPS 1613
>gi|356530772|ref|XP_003533954.1| PREDICTED: uncharacterized protein LOC100798789 [Glycine max]
Length = 1615
Score = 2647 bits (6861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1300/1647 (78%), Positives = 1445/1647 (87%), Gaps = 40/1647 (2%)
Query: 1 MDQNQSQRSSIGAATASSASSRAYQFHPARAAIIDLFNLYLG--RSSRQKQDDSIRDPPF 58
MDQ+Q+QR AT+++ SR++QFHP R I DLFNLYLG R+SRQK DDS+RDPP
Sbjct: 1 MDQSQNQR----PATSTTTPSRSFQFHPLRVPIFDLFNLYLGLGRNSRQKPDDSLRDPP- 55
Query: 59 FNLRLLIRGLVACCGGILLIVEEFMLRNKTQKRVLALNRELPPRNEQFLIDFEQLQSQFP 118
NKTQKRV ALNRELPP NEQF++DFEQLQSQ
Sbjct: 56 ---------------------------NKTQKRVHALNRELPPPNEQFILDFEQLQSQCA 88
Query: 119 DQDQLRSVTESVLISMVVQCCSHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAE 178
DQDQLRSVTE++LIS+VVQC H PRA+F+LF LRSLC IG INWD+ LPSLLSSVSSAE
Sbjct: 89 DQDQLRSVTEAILISLVVQCSGHGPRADFLLFVLRSLCGIGCINWDSLLPSLLSSVSSAE 148
Query: 179 MSAGQGSQAMPAVSATSLQQSGMLPTSSGIPNSSNYQSSNPASPLPSVHGIGSPAQSAIE 238
+ GQ SQA+P VS++SL Q+GMLP S I NSSN+QSSNPASPL SVH IGSPAQS +E
Sbjct: 149 LPVGQLSQAVPTVSSSSLSQTGMLPPPSTIANSSNFQSSNPASPLTSVHTIGSPAQSTME 208
Query: 239 TSVCAAMSPVKSSDVSCTGQQFTTRVNSSVRDNAIS--SLRQLCCKIILTGLEFSLKPVT 296
CAAMSPVKSSD+S GQQ R + SVR N IS SLRQLCCKIILTGLEFSLKPVT
Sbjct: 209 PLSCAAMSPVKSSDISSAGQQSKLRGSPSVRTNDISNSSLRQLCCKIILTGLEFSLKPVT 268
Query: 297 HADIFYHMLNWLVTWDQKQQGIDESDG-KSWRLDKALIEWLHSCLDVIWLLVDEDRCRVP 355
+A+IF +MLNWLV WDQ+QQGIDESD KSWR DKA+I WLHSCLDVIWLLVDE +CRVP
Sbjct: 269 YAEIFNYMLNWLVNWDQRQQGIDESDVIKSWRPDKAVIAWLHSCLDVIWLLVDEGKCRVP 328
Query: 356 FYELLRTGLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILSQT 415
FYELLR+ LQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRIL+QT
Sbjct: 329 FYELLRSDLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILNQT 388
Query: 416 TPNISVEAAGNLRYSPITYPSVLGEPLHGEDLATSIQRGSLDWERAMRCIRHAIRATPSP 475
PN+S EA +LR SPITY SVLGEPLHGED+A+SIQ+GSLDWERA+RCIRHA+R TPSP
Sbjct: 389 IPNVSGEAVAHLRLSPITYLSVLGEPLHGEDIASSIQKGSLDWERAVRCIRHALRTTPSP 448
Query: 476 DWWKRVLLVAPCYRNPAQGPTPGAVFTYDMISEAVIDRIVELLKLTNSEVNCWHDWLIFS 535
DWW+RVL++APCYRN +QGPT GAVF+ +MI EA IDRIVELLK+TNSE+NCW DWL+FS
Sbjct: 449 DWWRRVLVLAPCYRNSSQGPTAGAVFSSEMICEATIDRIVELLKMTNSEINCWQDWLVFS 508
Query: 536 DVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSR 595
D+F+FL+KSGCIDFVDFVDKLVSRL +GD+HIL+TNHVTWLLAQIIR+ELVM ALNSD R
Sbjct: 509 DIFYFLIKSGCIDFVDFVDKLVSRLTEGDHHILKTNHVTWLLAQIIRIELVMNALNSDPR 568
Query: 596 KVETTRKILSFHREDRCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQKGKQ 655
KVETTRKILSFHREDR +DPNNPQSILLDF+SSCQNLRIWSLN+STREYLNNEQLQKGKQ
Sbjct: 569 KVETTRKILSFHREDRSSDPNNPQSILLDFVSSCQNLRIWSLNSSTREYLNNEQLQKGKQ 628
Query: 656 IDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTELFPGSN 715
IDEWWRQ SKG+RMMDYMNMD+RS+GMFWVV+YTMAQPACETVMNWL+SAGV +L PG+N
Sbjct: 629 IDEWWRQASKGERMMDYMNMDERSIGMFWVVTYTMAQPACETVMNWLNSAGVADLLPGAN 688
Query: 716 LPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLML 775
L ERLM REV+PLPMSLL+GFS+NLC+KL+ QMEDS+F GQV+ SIAMVETYTRL+L
Sbjct: 689 LQQAERLMATREVSPLPMSLLSGFSINLCVKLSYQMEDSLFSGQVIPSIAMVETYTRLLL 748
Query: 776 LAPHSLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRLLPLYRYQGKTKTLMYDITKII 835
LAPHSLFRS F+HL QRNPSLL+K GVT LVLEI+NYRLLPLYRYQGK+K LMYD+TKII
Sbjct: 749 LAPHSLFRSHFNHLVQRNPSLLSKPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKII 808
Query: 836 SALKVKRGDHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAIIIK 895
SA+K KRGDHRV RLAENLC+NLI S RDFF +KREGKG TEFTETLNR+TVI LAI+IK
Sbjct: 809 SAIKGKRGDHRVFRLAENLCLNLIFSLRDFFLVKREGKGPTEFTETLNRVTVITLAILIK 868
Query: 896 TRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQ 955
TRGIADA+H+LYLQ MLEQIMATS HTWSEKTL +FPS+LR+AL G+ DKR L IQ WQQ
Sbjct: 869 TRGIADAEHLLYLQNMLEQIMATSHHTWSEKTLHHFPSVLREALSGQTDKRSLAIQTWQQ 928
Query: 956 AETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRV 1015
AETTVI+QCTQLLSPSADP+YV TY+SHSFPQHRQYLCAGA ILM GH ENINS NL RV
Sbjct: 929 AETTVIHQCTQLLSPSADPSYVMTYISHSFPQHRQYLCAGALILMHGHAENINSGNLGRV 988
Query: 1016 LREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDIL 1075
LREFSPEEVTSNIYTMVDVLLHH+ +ELQ+GHS QDL+ KACA+I+FFV T+ELLPLDIL
Sbjct: 989 LREFSPEEVTSNIYTMVDVLLHHMQIELQQGHSSQDLMLKACASIAFFVWTNELLPLDIL 1048
Query: 1076 LLALIDRDDDPHALRIVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGN 1135
LLALIDRDDDPHALR+VI+LLDR ELQQRVK +CM RG PEHWLYSG+FKRVELQKALGN
Sbjct: 1049 LLALIDRDDDPHALRMVISLLDRPELQQRVKHFCMTRGHPEHWLYSGIFKRVELQKALGN 1108
Query: 1136 HLSWKERYPTFFDDIAARLLPVIPLIVYRLIENDAMDSADRVLATYSSFLAYYPLRFSFV 1195
HL+WK+RYP FFDDIAARLLPVIPLI+YRLIENDAMD+A+R+LA YS LAYYPLRF+FV
Sbjct: 1109 HLAWKDRYPVFFDDIAARLLPVIPLIIYRLIENDAMDTAERLLAMYSPLLAYYPLRFTFV 1168
Query: 1196 RDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLGLV 1255
RDILAYFYGHLPGKLIVRILNV D+SKIPFSESFPQ IS +NPVMCPPLDYF TLLLG+V
Sbjct: 1169 RDILAYFYGHLPGKLIVRILNVLDISKIPFSESFPQQISLTNPVMCPPLDYFTTLLLGIV 1228
Query: 1256 NNVIPALNYNSKSGSTMDAS---LRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1312
NNVIP L+ NSKSGS DAS LR +K P SQSG +N SEG+K FYQ QDPGTYTQ
Sbjct: 1229 NNVIPPLHNNSKSGSMGDASSNTLRTAQSKPPAVSQSGSANASEGQKAFYQIQDPGTYTQ 1288
Query: 1313 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPS 1372
LVLETAVIEILSLP+SASQIV SLVQIVVNIQPTLIQ+SN +G SNSVGQGSVLPTSPS
Sbjct: 1289 LVLETAVIEILSLPISASQIVQSLVQIVVNIQPTLIQSSNALHGGSNSVGQGSVLPTSPS 1348
Query: 1373 GGSTDSLGASRSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYM 1432
GGSTDSLGASRSTPSVSGINTS+F SRSGYTCQQLSCLLIQACGLLLAQLP DFH QLY+
Sbjct: 1349 GGSTDSLGASRSTPSVSGINTSNFASRSGYTCQQLSCLLIQACGLLLAQLPSDFHSQLYL 1408
Query: 1433 EASRIIKESWWLADGKRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNLP 1492
E +RIIKE+WWL DG RSLGE+DSAVGYALLDPTWAAQDNTSTAIGN+VALLHSFFSNLP
Sbjct: 1409 ETTRIIKENWWLKDGTRSLGEIDSAVGYALLDPTWAAQDNTSTAIGNVVALLHSFFSNLP 1468
Query: 1493 QEWLEGTHVIIKHLRPITSVAMLRIVFRIMGPLLPRLVNAHTLFNKTLALLLNTMGDVYG 1552
QEWLEGT+VIIK LRP+TSVAMLRI FR+MGPLLP+L NAH LFNKTL+ LL + DV+G
Sbjct: 1469 QEWLEGTNVIIKQLRPVTSVAMLRIAFRVMGPLLPKLANAHALFNKTLSSLLTILVDVFG 1528
Query: 1553 KNTLPPAPVEASEIADLIDFLHHVVHYEGQGGPVQASSKPRPEVLVLTGRAAESLRPEVQ 1612
KN+ V+AS+IAD+IDFLHHVVHYEGQGGPVQASSKPRPEVL L GRA+ESLRP++Q
Sbjct: 1529 KNSQTSIAVDASDIADIIDFLHHVVHYEGQGGPVQASSKPRPEVLALIGRASESLRPDIQ 1588
Query: 1613 HLLSHLKPDVNSSIYAATHPKMVQNPS 1639
HLLSHL PDVNSS+YAA HPK+ QNP+
Sbjct: 1589 HLLSHLNPDVNSSVYAAFHPKLAQNPT 1615
>gi|359472598|ref|XP_002281148.2| PREDICTED: uncharacterized protein LOC100262719 [Vitis vinifera]
Length = 1663
Score = 2578 bits (6683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1283/1564 (82%), Positives = 1409/1564 (90%), Gaps = 11/1564 (0%)
Query: 80 EEFMLRNKTQKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCC 139
+ + RNKTQKRV ALNRELPPRNEQFL+DF QLQSQF DQDQLRSVTES+LIS+VV C
Sbjct: 107 KNLVFRNKTQKRVTALNRELPPRNEQFLLDFGQLQSQFSDQDQLRSVTESILISLVVPCS 166
Query: 140 SHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQGSQAMPAVSATSLQQS 199
H PRAEF+LFALRSLCSIGYINWDTFLPSLLSSVSSAEMS GQG+QA+ +VS+TSL S
Sbjct: 167 GHAPRAEFLLFALRSLCSIGYINWDTFLPSLLSSVSSAEMSVGQGNQAVTSVSSTSLSPS 226
Query: 200 GMLPTSSGIPNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSDVSCTGQQ 259
GMLP+SS I NSS +QSSNPASPLPSVHGI SPAQSA + S C A+SPVKSSD+SC+GQQ
Sbjct: 227 GMLPSSSTIHNSSTFQSSNPASPLPSVHGISSPAQSATDPSPCVALSPVKSSDISCSGQQ 286
Query: 260 FTTRVNSSVRDNAISSLRQLCCKIILTGLEFSLKPVTHADIFYHMLNWLVTWDQKQQGID 319
T RVNS++RDN +S LRQLCCKIILTGL+F+LKPVT+A+IF HMLNWLV WDQ+QQ
Sbjct: 287 STMRVNSTIRDNTLSCLRQLCCKIILTGLDFNLKPVTYAEIFNHMLNWLVNWDQRQQ--- 343
Query: 320 ESD-GKSWRLDKALIEWLHSCLDVIWLLVDEDRCRVPFYELLRTGLQFIENIPDDEALFT 378
ESD KSWR DKALIEWLHSCLDVIWLLV+ED+CRVPFYELLR+GLQFIENIPDDEALFT
Sbjct: 344 ESDVAKSWRPDKALIEWLHSCLDVIWLLVEEDKCRVPFYELLRSGLQFIENIPDDEALFT 403
Query: 379 LILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPSVL 438
LILEIHRRRDMMAMHMQMLDQHL CPTFGTHR LSQTT IS EA NLRYSPI YPSVL
Sbjct: 404 LILEIHRRRDMMAMHMQMLDQHLQCPTFGTHRFLSQTTSPISGEAVANLRYSPIMYPSVL 463
Query: 439 GEPLHGEDLATSIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQGPTPG 498
GEPLHGEDLA SIQRGSLDWERA+RCIRHA+R TPSPDWWKRVLLVAPCYR+ QGP+ G
Sbjct: 464 GEPLHGEDLANSIQRGSLDWERALRCIRHALRTTPSPDWWKRVLLVAPCYRSHPQGPSAG 523
Query: 499 AVFTYDMISEAVIDRIVELLKLTNSEVNCWHDWLIFSDVFFFLVKSGCIDFVDFVDKLVS 558
AVFT +MI EA IDRIVELLKLTNS++NCW +WL+FSD+FFFL+K+GCIDFVDFVDKL+
Sbjct: 524 AVFTSEMICEATIDRIVELLKLTNSDINCWQEWLVFSDIFFFLMKNGCIDFVDFVDKLIL 583
Query: 559 RLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRKILSFHREDRCTDPNNP 618
RL +GDNHILRTNHVTWLLAQIIRVELVM AL SD RK+ETTRKILSFH+EDR +DPNNP
Sbjct: 584 RLIEGDNHILRTNHVTWLLAQIIRVELVMNALTSDPRKMETTRKILSFHKEDRSSDPNNP 643
Query: 619 QSILLDFISSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWRQVSKGDRMMDYMNMDDR 678
QSILLDFISSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWR +KG+RMMDY+ +DDR
Sbjct: 644 QSILLDFISSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWRLANKGERMMDYVTLDDR 703
Query: 679 SVGMFWVVSYTMAQPACETVMNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTG 738
S+GMFWV+SYTMAQPAC+TVMNW SSAG EL PGS+L NER+MVM+E++PLPMSLL+G
Sbjct: 704 SIGMFWVMSYTMAQPACDTVMNWFSSAGAAELIPGSHLQSNERVMVMKEISPLPMSLLSG 763
Query: 739 FSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAPHSLFRSLFSHLAQRNPSLLA 798
FSL+LC+KLA QMEDS+F GQVV SIA+VETYTRL+L+APHSLFRS FS R P++L+
Sbjct: 764 FSLHLCMKLAFQMEDSLFSGQVVPSIALVETYTRLLLIAPHSLFRSHFS----RYPAILS 819
Query: 799 KVGVTPLVLEIVNYRLLPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNL 858
K G T LVLEI+NYRLLPLYRYQGK KTLMYD+TKI+SALK KRGDHR RLAENLCMNL
Sbjct: 820 KPGATLLVLEILNYRLLPLYRYQGKGKTLMYDVTKIVSALKGKRGDHRAFRLAENLCMNL 879
Query: 859 ILSQRDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMAT 918
ILS RD F +K+EGKG TEFTETLNRIT+I LAIIIKTRGIA+ADH+ YLQTMLEQIMAT
Sbjct: 880 ILSLRDPFQVKKEGKGPTEFTETLNRITIITLAIIIKTRGIAEADHLPYLQTMLEQIMAT 939
Query: 919 SQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVK 978
SQHTWSEKTLRYFPSLLR+A+IGRIDK+ L IQAWQQAETTVI QCT LL S DP+YV
Sbjct: 940 SQHTWSEKTLRYFPSLLREAMIGRIDKKNLAIQAWQQAETTVIAQCTNLLLSSGDPSYVM 999
Query: 979 TYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHH 1038
TY+SHSFPQHR+YLCA A +LM GHP+NIN ANL RVLREFSPEEVTSNIYTMVDVLLHH
Sbjct: 1000 TYISHSFPQHRRYLCAAACMLMHGHPDNINVANLARVLREFSPEEVTSNIYTMVDVLLHH 1059
Query: 1039 IHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIVITLLDR 1098
IH+ELQ GHSLQDLL KACAN++FF+ T+ELLPLDILLLALIDRDDD HALRIVI+LLD+
Sbjct: 1060 IHMELQHGHSLQDLLSKACANLAFFIWTNELLPLDILLLALIDRDDDSHALRIVISLLDK 1119
Query: 1099 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERYPTFFDDIAARLLPVI 1158
QELQQRVKL+C NRG PEHWL SG+FKR +LQKALGNHLSWKERYP FFDD AARLLPVI
Sbjct: 1120 QELQQRVKLFCNNRGSPEHWLCSGMFKRADLQKALGNHLSWKERYPVFFDDAAARLLPVI 1179
Query: 1159 PLIVYRLIENDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHLPGKLIVRILNVF 1218
PL+VYRLIENDA D ADRVLA YS LAY+PLRF+FVRDILAYFYGHLPGKL VRILN+
Sbjct: 1180 PLVVYRLIENDATDQADRVLAMYSQLLAYHPLRFTFVRDILAYFYGHLPGKLTVRILNIL 1239
Query: 1219 DLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDAS--- 1275
DL KIPFSESF +H+SSSNPV+CPPLDYFATLLLGLVNNVIP +N NSKSGS D S
Sbjct: 1240 DLGKIPFSESFLKHMSSSNPVICPPLDYFATLLLGLVNNVIPPINTNSKSGSMGDTSNNT 1299
Query: 1276 LRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSS 1335
LRAPHNK+P SQSGP+N SEG+K FYQ QDPGT+TQLVLETAVIEILSLPV A+QIVSS
Sbjct: 1300 LRAPHNKTPAASQSGPTNASEGQKSFYQTQDPGTFTQLVLETAVIEILSLPVPATQIVSS 1359
Query: 1336 LVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSS 1395
LVQI+V+IQ TLIQ+SNG +G N VGQGSVLPTSPSGGSTDSL ASRS+ SVSGIN S+
Sbjct: 1360 LVQIIVHIQSTLIQSSNGLHGPPNGVGQGSVLPTSPSGGSTDSLSASRSSASVSGINASN 1419
Query: 1396 FVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESWWLADGKRSLGELD 1455
FVSRSGYTCQQLSCLLIQACGLLLAQLPPDFH QLY+EAS +IKESWWL DGKRSLGELD
Sbjct: 1420 FVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHKQLYIEASCLIKESWWLTDGKRSLGELD 1479
Query: 1456 SAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLRPITSVAML 1515
SAVGYALLDPTWAAQDNTSTAIGNIVALLH+FFSNLPQEWLEGTH+IIKHLRP+TSVAML
Sbjct: 1480 SAVGYALLDPTWAAQDNTSTAIGNIVALLHAFFSNLPQEWLEGTHLIIKHLRPVTSVAML 1539
Query: 1516 RIVFRIMGPLLPRLVNAHTLFNKTLALLLNTMGDVYGKNTLPPAPVEASEIADLIDFLHH 1575
RI FRIMGPLLPRL NAH+LFNKTL+LLLNTM DV+G+N+ P PVEASEIADLIDFLHH
Sbjct: 1540 RIAFRIMGPLLPRLSNAHSLFNKTLSLLLNTMVDVFGRNSQPATPVEASEIADLIDFLHH 1599
Query: 1576 VVHYEGQGGPVQASSKPRPEVLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYAATHPKMV 1635
VHYEGQGGPVQASSKPRPEVL L GRA+ESLRP++QHLLSHLK D+NSSIYAATHPK+V
Sbjct: 1600 AVHYEGQGGPVQASSKPRPEVLALCGRASESLRPDIQHLLSHLKTDINSSIYAATHPKLV 1659
Query: 1636 QNPS 1639
QNPS
Sbjct: 1660 QNPS 1663
>gi|297845394|ref|XP_002890578.1| hypothetical protein ARALYDRAFT_472581 [Arabidopsis lyrata subsp.
lyrata]
gi|297336420|gb|EFH66837.1| hypothetical protein ARALYDRAFT_472581 [Arabidopsis lyrata subsp.
lyrata]
Length = 1637
Score = 2445 bits (6337), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1210/1667 (72%), Positives = 1384/1667 (83%), Gaps = 80/1667 (4%)
Query: 4 NQSQRSSIGAATASSASSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPFFNLRL 63
+QSQR+ A+ +SSR+YQFHPARAAIIDLFNLYLGR SRQK D+S+RDPP
Sbjct: 2 DQSQRT----VAATPSSSRSYQFHPARAAIIDLFNLYLGRGSRQKPDESLRDPP------ 51
Query: 64 LIRGLVACCGGILLIVEEFMLRNKTQKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQL 123
NK+QKRV A N +LPPRNEQF++DFEQLQSQF D +QL
Sbjct: 52 ----------------------NKSQKRVHAPNGDLPPRNEQFILDFEQLQSQFNDPEQL 89
Query: 124 RSVTESVLISMVVQCCSHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQ 183
R++TESVLIS+VVQC +H PRAEF+LFALR+LC I YINWDTFLPSLLSSVS+AE S Q
Sbjct: 90 RTITESVLISLVVQCSNHAPRAEFLLFALRTLCRISYINWDTFLPSLLSSVSAAEASLSQ 149
Query: 184 GSQAMPAVSATSLQQSGMLPTSSG-IPNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVC 242
G QA ++++ ++P S+ + +SSNY S+NP S LPS HGIGSP+ S E
Sbjct: 150 GVQAAATAASSATSSQSLVPVSANPVSSSSNYHSTNPTSLLPSAHGIGSPSASGNEPGSL 209
Query: 243 AAMSPVKSSDVSCTGQQFTTRVNSSVRDNA-----------ISSLRQLCCKIILTGLEFS 291
+ VKS + GQQ R +VR+NA I+SLRQL CKIIL G+EFS
Sbjct: 210 TTFAQVKSLE---NGQQIA-RAGQTVRENAMRNSQRIRAAAINSLRQLSCKIILIGVEFS 265
Query: 292 LKPVTHADIFYHMLNWLVTWDQKQQGIDESDGKSWRLDKALIEWLHSCLDVIWLLVDEDR 351
LKPVTHA+IF +MLNWLV WD++ G ++S G SWR +K L EWL SCLDVIWLLV E
Sbjct: 266 LKPVTHAEIFQYMLNWLVNWDRRDLGTEDSAGTSWRSEKTLAEWLRSCLDVIWLLVKEVE 325
Query: 352 CRVPFYELLRTGLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRI 411
R+PFYELLR+GLQFIENIPDDEALFTLI+EIHRRRD MAMHM MLDQHLHCPTFGTHRI
Sbjct: 326 SRIPFYELLRSGLQFIENIPDDEALFTLIMEIHRRRDAMAMHMLMLDQHLHCPTFGTHRI 385
Query: 412 LSQTTPNISVEAAGNLRYSPITYPSVLGEPLHGEDLATSIQRGSLDWERAMRCIRHAIRA 471
+SQ T N+S EA +LR+SPITYPSVLGEPL+GEDLA I +GSLDWERA+RCIRHAIR
Sbjct: 386 VSQVTANVSAEAVQHLRHSPITYPSVLGEPLYGEDLAMFIPKGSLDWERAVRCIRHAIRT 445
Query: 472 TPSPDWWKRVLLVAPCYRNPAQ-GPTPGAVFTYDMISEAVIDRIVELLKLTNS------- 523
TPSPDWWKRVL+VAPCYR Q GP PGAVFT DMI EA+IDRIVELLKLTNS
Sbjct: 446 TPSPDWWKRVLVVAPCYRPSTQPGPIPGAVFTSDMICEAIIDRIVELLKLTNSGNDCFGI 505
Query: 524 ------------EVNCWHDWLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTN 571
+ NCW +WL+FSD+FFFL+KSGC DFVDF+DKLVSRL DNHILRTN
Sbjct: 506 DLVSVTFSPLYADANCWQEWLVFSDIFFFLIKSGCTDFVDFIDKLVSRLNGVDNHILRTN 565
Query: 572 HVTWLLAQIIRVELVMGALNSDSRKVETTRKILSFHREDRCTDPNNPQSILLDFISSCQN 631
HVTWLLAQIIRVELVM ALNSD++KVETTRKILSFHREDR +DPNNPQS+LLDF+SSCQN
Sbjct: 566 HVTWLLAQIIRVELVMTALNSDAKKVETTRKILSFHREDRNSDPNNPQSVLLDFVSSCQN 625
Query: 632 LRIWSLNTSTREYLNNEQLQKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMA 691
LRIWSL+T+TR YLNNEQL KGKQIDEWWR SKG+RMMDYMNMDDRS+GMFWVVSYTMA
Sbjct: 626 LRIWSLSTTTRAYLNNEQLLKGKQIDEWWR--SKGERMMDYMNMDDRSIGMFWVVSYTMA 683
Query: 692 QPACETVMNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQM 751
QPACETV+NWLSSAG+ EL PG L PN+R+M+ +EV PLPMSLL+GFS+NLCLKLALQM
Sbjct: 684 QPACETVINWLSSAGMAEL-PG--LQPNDRVMMTQEVTPLPMSLLSGFSMNLCLKLALQM 740
Query: 752 EDSIFGGQVVASIAMVETYTRLMLLAPHSLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVN 811
E+++F QVV SIAMVETYTRL+L++PHS+FRS FS LAQRN SLL+K GVT LVLEI+N
Sbjct: 741 EEALFVSQVVPSIAMVETYTRLLLISPHSMFRSHFSQLAQRNASLLSKPGVTLLVLEILN 800
Query: 812 YRLLPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILSQRDFFSLKRE 871
YRLLPLYRYQGK+KTLMYD+TKIISALK KRGDHR+ RLAENLCMNLILS RDFFS+KRE
Sbjct: 801 YRLLPLYRYQGKSKTLMYDVTKIISALKGKRGDHRIFRLAENLCMNLILSLRDFFSVKRE 860
Query: 872 GKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYF 931
GKG TEFTETLNRIT++ LAI IKTRGIAD DH++YLQTMLEQI+ATSQHTWSEKT+R+F
Sbjct: 861 GKGPTEFTETLNRITIMTLAITIKTRGIADPDHLVYLQTMLEQILATSQHTWSEKTMRHF 920
Query: 932 PSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQY 991
PSLLRD L R+DKRGL+IQAWQQAETTVINQCTQLLSPSA+P YV TYLSHSFPQHRQY
Sbjct: 921 PSLLRDTLNVRVDKRGLSIQAWQQAETTVINQCTQLLSPSAEPAYVSTYLSHSFPQHRQY 980
Query: 992 LCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQD 1051
LCAGA +LMQGH ENINS NL RVLRE SPEEVT+NIYT+VDVLLHH+HV+LQ+G SL+
Sbjct: 981 LCAGACLLMQGHAENINSTNLARVLREVSPEEVTANIYTLVDVLLHHVHVDLQQGQSLEA 1040
Query: 1052 LLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIVITLLDRQELQQRVKLYCMN 1111
+L KA AN++FF THE+LPLDI LLALIDRDDDPHAL I ++LL +L R+K YC N
Sbjct: 1041 VLDKAGANLAFFFWTHEMLPLDIFLLALIDRDDDPHALIIAMSLLKTPDLLLRIKNYCQN 1100
Query: 1112 RGPPEHWLYSGLFKRVELQKALGNHLSWKERYPTFFDDIAARLLPVIPLIVYRLIENDAM 1171
RG PEHWL + +FKR ELQKALGNHLSWK+RYPTFFDDIAARLLPVIPL+VYRLIEN+AM
Sbjct: 1101 RGSPEHWLVTQVFKRNELQKALGNHLSWKDRYPTFFDDIAARLLPVIPLVVYRLIENNAM 1160
Query: 1172 DSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQ 1231
+ AD +L +S FLAY+PLRF+FVRDILAYFYGHLPGKL++R+L V DLSKIPFSESFPQ
Sbjct: 1161 EQADNLLLAHSHFLAYHPLRFTFVRDILAYFYGHLPGKLVMRMLKVLDLSKIPFSESFPQ 1220
Query: 1232 HISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKS-------GSTMDASLRAPHNKSP 1284
+IS + +CPPLDYFA+LLL LVNNVIP L+ +S +++S R H K+P
Sbjct: 1221 YISPAGAAVCPPLDYFASLLLNLVNNVIPPLSSSSNCSSRSGSMADILNSSARPLHGKTP 1280
Query: 1285 MTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQ 1344
TSQ GP+N SEG+K FYQ QDPGTYTQLVLETAVIEILSLPVSA+QIVSSLVQI+VNIQ
Sbjct: 1281 GTSQPGPANASEGQKAFYQIQDPGTYTQLVLETAVIEILSLPVSAAQIVSSLVQIIVNIQ 1340
Query: 1345 PTLIQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSSFVSRSGYTC 1404
TLIQ+ NG +GA+N VGQGSVLPTSPSGGSTDS+ ASRST + GINT+SFVSRSGYTC
Sbjct: 1341 STLIQSGNGFHGAANGVGQGSVLPTSPSGGSTDSMSASRSTCLIPGINTASFVSRSGYTC 1400
Query: 1405 QQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESWWLADGKRSLGELDSAVGYALLD 1464
QQLSCLLIQACGLLLAQLPPDFH QLY+EA+R+ +E+WWL DGKR+ GELDSAVGYAL+D
Sbjct: 1401 QQLSCLLIQACGLLLAQLPPDFHTQLYLEAARVTRETWWLKDGKRAQGELDSAVGYALMD 1460
Query: 1465 PTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLRPITSVAMLRIVFRIMGP 1524
PTWAAQDNTSTAIGNIVALLH+FFSNLPQEWL+GT+ IIK+LRP+TSVAMLR+VFRIMGP
Sbjct: 1461 PTWAAQDNTSTAIGNIVALLHAFFSNLPQEWLDGTNAIIKNLRPVTSVAMLRVVFRIMGP 1520
Query: 1525 LLPRLVNAHTLFNKTLALLLNTMGDVYGKNTLPPAPVEASEIADLIDFLHHVVHYEGQGG 1584
LLPRL + HTLFNKTL LLL + DV+GKN APVEAS+IADLIDFLHH++HYEGQGG
Sbjct: 1521 LLPRLASTHTLFNKTLTLLLTALVDVFGKNAQTTAPVEASKIADLIDFLHHIIHYEGQGG 1580
Query: 1585 PVQASSKPRPEVLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYAATH 1631
VQ SSKPRP++L L GRAA+SLRP+VQHLL+HLK + NSSIYAA H
Sbjct: 1581 AVQTSSKPRPDILALIGRAADSLRPDVQHLLAHLKTNPNSSIYAAAH 1627
>gi|334182788|ref|NP_001185071.1| uncharacterized protein [Arabidopsis thaliana]
gi|332192239|gb|AEE30360.1| uncharacterized protein [Arabidopsis thaliana]
Length = 1592
Score = 2438 bits (6318), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1195/1639 (72%), Positives = 1370/1639 (83%), Gaps = 69/1639 (4%)
Query: 4 NQSQRSSIGAATASSASSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPFFNLRL 63
+QSQR+ A+ +SSR+YQFHPARAAIIDLFNLYLGR SRQK D+S+RDPP
Sbjct: 2 DQSQRT----VAATPSSSRSYQFHPARAAIIDLFNLYLGRGSRQKPDESLRDPP------ 51
Query: 64 LIRGLVACCGGILLIVEEFMLRNKTQKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQL 123
NK+QKRV A NR+LPPRNEQFL+DFE LQSQF D +QL
Sbjct: 52 ----------------------NKSQKRVHAPNRDLPPRNEQFLLDFELLQSQFNDPEQL 89
Query: 124 RSVTESVLISMVVQCCSHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQ 183
R++TESVLIS+VVQC +H PRAEF+LFALR+LC I YINWDTFLPSLLSSVS+AE S Q
Sbjct: 90 RTITESVLISLVVQCSNHAPRAEFLLFALRTLCRISYINWDTFLPSLLSSVSAAEASLSQ 149
Query: 184 GSQAMPAVSATSLQQSGMLPTSSGIPNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVCA 243
G QA A + +S S S S NP S LPS HGIGSP+ S ++
Sbjct: 150 GVQAAAATAGSSATSS----------QSVVPVSVNPTSLLPSAHGIGSPSASEVK----- 194
Query: 244 AMSPVKSSDVSCTGQ---QFTTRVNSSVRDNAISSLRQLCCKIILTGLEFSLKPVTHADI 300
S ++ GQ + R + +R A++SLRQL CKIIL G+E SLKPVTHA+I
Sbjct: 195 --SVENGQQIARAGQIVRENAMRNSQRIRAAAVNSLRQLSCKIILIGVESSLKPVTHAEI 252
Query: 301 FYHMLNWLVTWDQKQQGIDESDGKSWRLDKALIEWLHSCLDVIWLLVDEDRCRVPFYELL 360
F +M+NWLV WD++ G ++S GKSWR +K L EWL SCLDVIWLLV+E R+PFYELL
Sbjct: 253 FQYMMNWLVNWDRRDLGTEDSVGKSWRSEKTLAEWLRSCLDVIWLLVEEGESRIPFYELL 312
Query: 361 RTGLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTPNIS 420
R+GLQFIENIPDDEALFTLI+EIHRRRD MAMHM MLDQHLHCP+FGTHRI+SQ T N+
Sbjct: 313 RSGLQFIENIPDDEALFTLIMEIHRRRDAMAMHMLMLDQHLHCPSFGTHRIVSQITANVP 372
Query: 421 VEAAGNLRYSPITYPSVLGEPLHGEDLATSIQRGSLDWERAMRCIRHAIRATPSPDWWKR 480
EA +LR+SPITYPSVLGEPL+GEDLA SI +GSLDWERA+RCIRHAIR TPSPDWWKR
Sbjct: 373 PEAVPHLRHSPITYPSVLGEPLYGEDLAMSIPKGSLDWERAVRCIRHAIRTTPSPDWWKR 432
Query: 481 VLLVAPCYRNPAQ-GPTPGAVFTYDMISEAVIDRIVELLKLTNSEVNCWHDWLIFSDVFF 539
VL+VAPCYR Q GP PGAVFT DMI EA+IDRIVELLKLTNS+ NCW +WL+FSD+FF
Sbjct: 433 VLVVAPCYRPSTQAGPIPGAVFTSDMICEAIIDRIVELLKLTNSDANCWQEWLVFSDIFF 492
Query: 540 FLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVET 599
FL+KSGC DFVDF+DKLV RL DNHILRTNHVTWLLAQIIRVELVM ALNSD++KVET
Sbjct: 493 FLIKSGCTDFVDFIDKLVLRLNGVDNHILRTNHVTWLLAQIIRVELVMTALNSDAKKVET 552
Query: 600 TRKILSFHREDRCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEW 659
TRKILSFHREDR +DPNNPQS+LLDF+SSCQNLRIWSL+T+TR YLNNEQL KGKQIDEW
Sbjct: 553 TRKILSFHREDRNSDPNNPQSVLLDFVSSCQNLRIWSLSTTTRAYLNNEQLLKGKQIDEW 612
Query: 660 WRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTELFPGSNLPPN 719
WR SKG+RMMDYMNMDDRS+GMFWVVSYTMAQPACETV+NWLSSAG+ EL PG L PN
Sbjct: 613 WR--SKGERMMDYMNMDDRSIGMFWVVSYTMAQPACETVINWLSSAGMAEL-PG--LQPN 667
Query: 720 ERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAPH 779
+R+M+ +EV PLPMSLL+GFS+NLCLKLALQME+++F QVV SIAMVETYTRL+L++PH
Sbjct: 668 DRVMMTQEVTPLPMSLLSGFSMNLCLKLALQMEEALFVSQVVPSIAMVETYTRLLLISPH 727
Query: 780 SLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRLLPLYRYQGKTKTLMYDITKIISALK 839
S+FRS FS RN SLL+K GVT LVLEI+NYRLLPLYRYQGK+KTLMYD+TKIISALK
Sbjct: 728 SMFRSHFS----RNASLLSKPGVTLLVLEILNYRLLPLYRYQGKSKTLMYDVTKIISALK 783
Query: 840 VKRGDHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI 899
KRGDHR+ RLAENLCMNLILS RDFFS+KREGKG TEFTETLNRIT++ LAI IKTRGI
Sbjct: 784 GKRGDHRIFRLAENLCMNLILSLRDFFSVKREGKGPTEFTETLNRITIMTLAITIKTRGI 843
Query: 900 ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETT 959
AD DH++YLQTMLEQI+ATSQHTWSEKT+R+FPSLLR+ L GR+DKRGL+IQAWQQAETT
Sbjct: 844 ADPDHMVYLQTMLEQILATSQHTWSEKTMRHFPSLLRETLKGRVDKRGLSIQAWQQAETT 903
Query: 960 VINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREF 1019
VINQCTQLLSPSA+P YV TYLSHSFPQHRQYLCAGA +LMQGH ENINS NL RVLRE
Sbjct: 904 VINQCTQLLSPSAEPAYVSTYLSHSFPQHRQYLCAGACLLMQGHAENINSTNLARVLREV 963
Query: 1020 SPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLAL 1079
SPEEVT+NIYT+VDVLLHH+HV+LQ+G SL+ +L KA AN++FF THE+LPLDI LLAL
Sbjct: 964 SPEEVTANIYTLVDVLLHHVHVDLQQGQSLEAVLDKAGANLAFFFWTHEMLPLDIFLLAL 1023
Query: 1080 IDRDDDPHALRIVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSW 1139
IDRDDDPHAL I ++LL +L R+K YC NRG PEHWL + +FKR ELQKALGNHLSW
Sbjct: 1024 IDRDDDPHALIIAMSLLKTPDLLLRIKNYCQNRGSPEHWLVTQVFKRNELQKALGNHLSW 1083
Query: 1140 KERYPTFFDDIAARLLPVIPLIVYRLIENDAMDSADRVLATYSSFLAYYPLRFSFVRDIL 1199
K+RYPTFFDDIAARLLPVIPL++YRLIEN+AM+ AD +L +S FLAY+PLRF+FVRDIL
Sbjct: 1084 KDRYPTFFDDIAARLLPVIPLVLYRLIENNAMEQADNLLLAHSHFLAYHPLRFTFVRDIL 1143
Query: 1200 AYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVI 1259
AYFYGHLPGKL++R+L V DLSKIPFSESFPQ+IS + +CPPLDYFA+LLL LVNNVI
Sbjct: 1144 AYFYGHLPGKLVLRMLKVLDLSKIPFSESFPQYISPTGAPVCPPLDYFASLLLNLVNNVI 1203
Query: 1260 PALNYNSKS-------GSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1312
P L+ +S +++S R PH K+P TSQ GP+N SEG+K FYQ QDPGTYTQ
Sbjct: 1204 PPLSSSSNCSSRSGSMADILNSSARPPHGKTPGTSQPGPANASEGQKAFYQIQDPGTYTQ 1263
Query: 1313 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPS 1372
LVLETAVIEILSLPVSA+QIVSSLVQI+VNIQ TLIQ+ NG +GA+N VGQGSVLPTSPS
Sbjct: 1264 LVLETAVIEILSLPVSAAQIVSSLVQIIVNIQSTLIQSGNGFHGAANGVGQGSVLPTSPS 1323
Query: 1373 GGSTDSLGASRSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYM 1432
GGSTDS+ ASRST + GINT+SFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFH+QLY+
Sbjct: 1324 GGSTDSMSASRSTCLIPGINTASFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHVQLYL 1383
Query: 1433 EASRIIKESWWLADGKRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNLP 1492
EA+R+ +E+WWL DGKRS GELDSAVGYAL+DPTWAAQDNTSTAIGNIVALLH+FFSNLP
Sbjct: 1384 EAARVTRETWWLKDGKRSQGELDSAVGYALMDPTWAAQDNTSTAIGNIVALLHAFFSNLP 1443
Query: 1493 QEWLEGTHVIIKHLRPITSVAMLRIVFRIMGPLLPRLVNAHTLFNKTLALLLNTMGDVYG 1552
QEWL+GT+ II +LRP+TSVAMLR+VFRIMGPLLPRL + HTLFNKTL LLL+ + DV+G
Sbjct: 1444 QEWLDGTNAIITNLRPVTSVAMLRVVFRIMGPLLPRLASTHTLFNKTLMLLLSALVDVFG 1503
Query: 1553 KNTLPPAPVEASEIADLIDFLHHVVHYEGQGGPVQASSKPRPEVLVLTGRAAESLRPEVQ 1612
K APVEAS+IADLIDFLHH++HYEGQGG VQ SSKPRP++L L GRAAE+LRP+VQ
Sbjct: 1504 KTAQTTAPVEASQIADLIDFLHHIIHYEGQGGAVQTSSKPRPDILALIGRAAETLRPDVQ 1563
Query: 1613 HLLSHLKPDVNSSIYAATH 1631
HLL+HLK + NSSIYAA H
Sbjct: 1564 HLLAHLKTNPNSSIYAAAH 1582
>gi|15220680|ref|NP_173737.1| uncharacterized protein [Arabidopsis thaliana]
gi|395406782|sp|F4I4P3.1|MED23_ARATH RecName: Full=Mediator of RNA polymerase II transcription subunit 23
gi|332192238|gb|AEE30359.1| uncharacterized protein [Arabidopsis thaliana]
Length = 1615
Score = 2437 bits (6316), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1198/1658 (72%), Positives = 1373/1658 (82%), Gaps = 84/1658 (5%)
Query: 4 NQSQRSSIGAATASSASSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPFFNLRL 63
+QSQR+ A+ +SSR+YQFHPARAAIIDLFNLYLGR SRQK D+S+RDPP
Sbjct: 2 DQSQRT----VAATPSSSRSYQFHPARAAIIDLFNLYLGRGSRQKPDESLRDPP------ 51
Query: 64 LIRGLVACCGGILLIVEEFMLRNKTQKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQL 123
NK+QKRV A NR+LPPRNEQFL+DFE LQSQF D +QL
Sbjct: 52 ----------------------NKSQKRVHAPNRDLPPRNEQFLLDFELLQSQFNDPEQL 89
Query: 124 RSVTESVLISMVVQCCSHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQ 183
R++TESVLIS+VVQC +H PRAEF+LFALR+LC I YINWDTFLPSLLSSVS+AE S Q
Sbjct: 90 RTITESVLISLVVQCSNHAPRAEFLLFALRTLCRISYINWDTFLPSLLSSVSAAEASLSQ 149
Query: 184 GSQAMPAVSATSLQQSGMLPTSSGIPNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVCA 243
G QA A + +S S S S NP S LPS HGIGSP+ S ++
Sbjct: 150 GVQAAAATAGSSATSS----------QSVVPVSVNPTSLLPSAHGIGSPSASEVK----- 194
Query: 244 AMSPVKSSDVSCTGQ---QFTTRVNSSVRDNAISSLRQLCCKIILTGLEFSLKPVTHADI 300
S ++ GQ + R + +R A++SLRQL CKIIL G+E SLKPVTHA+I
Sbjct: 195 --SVENGQQIARAGQIVRENAMRNSQRIRAAAVNSLRQLSCKIILIGVESSLKPVTHAEI 252
Query: 301 FYHMLNWLVTWDQKQQGIDESDGKSWRLDKALIEWLHSCLDVIWLLVDEDRCRVPFYELL 360
F +M+NWLV WD++ G ++S GKSWR +K L EWL SCLDVIWLLV+E R+PFYELL
Sbjct: 253 FQYMMNWLVNWDRRDLGTEDSVGKSWRSEKTLAEWLRSCLDVIWLLVEEGESRIPFYELL 312
Query: 361 RTGLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTPNIS 420
R+GLQFIENIPDDEALFTLI+EIHRRRD MAMHM MLDQHLHCP+FGTHRI+SQ T N+
Sbjct: 313 RSGLQFIENIPDDEALFTLIMEIHRRRDAMAMHMLMLDQHLHCPSFGTHRIVSQITANVP 372
Query: 421 VEAAGNLRYSPITYPSVLGEPLHGEDLATSIQRGSLDWERAMRCIRHAIRATPSPDWWKR 480
EA +LR+SPITYPSVLGEPL+GEDLA SI +GSLDWERA+RCIRHAIR TPSPDWWKR
Sbjct: 373 PEAVPHLRHSPITYPSVLGEPLYGEDLAMSIPKGSLDWERAVRCIRHAIRTTPSPDWWKR 432
Query: 481 VLLVAPCYRNPAQ-GPTPGAVFTYDMISEAVIDRIVELLKLTNS---------------- 523
VL+VAPCYR Q GP PGAVFT DMI EA+IDRIVELLKLTNS
Sbjct: 433 VLVVAPCYRPSTQAGPIPGAVFTSDMICEAIIDRIVELLKLTNSGNDCFGIDLVSVTFPP 492
Query: 524 ---EVNCWHDWLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQI 580
+ NCW +WL+FSD+FFFL+KSGC DFVDF+DKLV RL DNHILRTNHVTWLLAQI
Sbjct: 493 LYADANCWQEWLVFSDIFFFLIKSGCTDFVDFIDKLVLRLNGVDNHILRTNHVTWLLAQI 552
Query: 581 IRVELVMGALNSDSRKVETTRKILSFHREDRCTDPNNPQSILLDFISSCQNLRIWSLNTS 640
IRVELVM ALNSD++KVETTRKILSFHREDR +DPNNPQS+LLDF+SSCQNLRIWSL+T+
Sbjct: 553 IRVELVMTALNSDAKKVETTRKILSFHREDRNSDPNNPQSVLLDFVSSCQNLRIWSLSTT 612
Query: 641 TREYLNNEQLQKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMN 700
TR YLNNEQL KGKQIDEWWR SKG+RMMDYMNMDDRS+GMFWVVSYTMAQPACETV+N
Sbjct: 613 TRAYLNNEQLLKGKQIDEWWR--SKGERMMDYMNMDDRSIGMFWVVSYTMAQPACETVIN 670
Query: 701 WLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQV 760
WLSSAG+ EL PG L PN+R+M+ +EV PLPMSLL+GFS+NLCLKLALQME+++F QV
Sbjct: 671 WLSSAGMAEL-PG--LQPNDRVMMTQEVTPLPMSLLSGFSMNLCLKLALQMEEALFVSQV 727
Query: 761 VASIAMVETYTRLMLLAPHSLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRLLPLYRY 820
V SIAMVETYTRL+L++PHS+FRS FS LAQRN SLL+K GVT LVLEI+NYRLLPLYRY
Sbjct: 728 VPSIAMVETYTRLLLISPHSMFRSHFSQLAQRNASLLSKPGVTLLVLEILNYRLLPLYRY 787
Query: 821 QGKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTE 880
QGK+KTLMYD+TKIISALK KRGDHR+ RLAENLCMNLILS RDFFS+KREGKG TEFTE
Sbjct: 788 QGKSKTLMYDVTKIISALKGKRGDHRIFRLAENLCMNLILSLRDFFSVKREGKGPTEFTE 847
Query: 881 TLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALI 940
TLNRIT++ LAI IKTRGIAD DH++YLQTMLEQI+ATSQHTWSEKT+R+FPSLLR+ L
Sbjct: 848 TLNRITIMTLAITIKTRGIADPDHMVYLQTMLEQILATSQHTWSEKTMRHFPSLLRETLK 907
Query: 941 GRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILM 1000
GR+DKRGL+IQAWQQAETTVINQCTQLLSPSA+P YV TYLSHSFPQHRQYLCAGA +LM
Sbjct: 908 GRVDKRGLSIQAWQQAETTVINQCTQLLSPSAEPAYVSTYLSHSFPQHRQYLCAGACLLM 967
Query: 1001 QGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANI 1060
QGH ENINS NL RVLRE SPEEVT+NIYT+VDVLLHH+HV+LQ+G SL+ +L KA AN+
Sbjct: 968 QGHAENINSTNLARVLREVSPEEVTANIYTLVDVLLHHVHVDLQQGQSLEAVLDKAGANL 1027
Query: 1061 SFFVLTHELLPLDILLLALIDRDDDPHALRIVITLLDRQELQQRVKLYCMNRGPPEHWLY 1120
+FF THE+LPLDI LLALIDRDDDPHAL I ++LL +L R+K YC NRG PEHWL
Sbjct: 1028 AFFFWTHEMLPLDIFLLALIDRDDDPHALIIAMSLLKTPDLLLRIKNYCQNRGSPEHWLV 1087
Query: 1121 SGLFKRVELQKALGNHLSWKERYPTFFDDIAARLLPVIPLIVYRLIENDAMDSADRVLAT 1180
+ +FKR ELQKALGNHLSWK+RYPTFFDDIAARLLPVIPL++YRLIEN+AM+ AD +L
Sbjct: 1088 TQVFKRNELQKALGNHLSWKDRYPTFFDDIAARLLPVIPLVLYRLIENNAMEQADNLLLA 1147
Query: 1181 YSSFLAYYPLRFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVM 1240
+S FLAY+PLRF+FVRDILAYFYGHLPGKL++R+L V DLSKIPFSESFPQ+IS + +
Sbjct: 1148 HSHFLAYHPLRFTFVRDILAYFYGHLPGKLVLRMLKVLDLSKIPFSESFPQYISPTGAPV 1207
Query: 1241 CPPLDYFATLLLGLVNNVIPALNYNSKS-------GSTMDASLRAPHNKSPMTSQSGPSN 1293
CPPLDYFA+LLL LVNNVIP L+ +S +++S R PH K+P TSQ GP+N
Sbjct: 1208 CPPLDYFASLLLNLVNNVIPPLSSSSNCSSRSGSMADILNSSARPPHGKTPGTSQPGPAN 1267
Query: 1294 VSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNG 1353
SEG+K FYQ QDPGTYTQLVLETAVIEILSLPVSA+QIVSSLVQI+VNIQ TLIQ+ NG
Sbjct: 1268 ASEGQKAFYQIQDPGTYTQLVLETAVIEILSLPVSAAQIVSSLVQIIVNIQSTLIQSGNG 1327
Query: 1354 PYGASNSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSSFVSRSGYTCQQLSCLLIQ 1413
+GA+N VGQGSVLPTSPSGGSTDS+ ASRST + GINT+SFVSRSGYTCQQLSCLLIQ
Sbjct: 1328 FHGAANGVGQGSVLPTSPSGGSTDSMSASRSTCLIPGINTASFVSRSGYTCQQLSCLLIQ 1387
Query: 1414 ACGLLLAQLPPDFHMQLYMEASRIIKESWWLADGKRSLGELDSAVGYALLDPTWAAQDNT 1473
ACGLLLAQLPPDFH+QLY+EA+R+ +E+WWL DGKRS GELDSAVGYAL+DPTWAAQDNT
Sbjct: 1388 ACGLLLAQLPPDFHVQLYLEAARVTRETWWLKDGKRSQGELDSAVGYALMDPTWAAQDNT 1447
Query: 1474 STAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLRPITSVAMLRIVFRIMGPLLPRLVNAH 1533
STAIGNIVALLH+FFSNLPQEWL+GT+ II +LRP+TSVAMLR+VFRIMGPLLPRL + H
Sbjct: 1448 STAIGNIVALLHAFFSNLPQEWLDGTNAIITNLRPVTSVAMLRVVFRIMGPLLPRLASTH 1507
Query: 1534 TLFNKTLALLLNTMGDVYGKNTLPPAPVEASEIADLIDFLHHVVHYEGQGGPVQASSKPR 1593
TLFNKTL LLL+ + DV+GK APVEAS+IADLIDFLHH++HYEGQGG VQ SSKPR
Sbjct: 1508 TLFNKTLMLLLSALVDVFGKTAQTTAPVEASQIADLIDFLHHIIHYEGQGGAVQTSSKPR 1567
Query: 1594 PEVLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYAATH 1631
P++L L GRAAE+LRP+VQHLL+HLK + NSSIYAA H
Sbjct: 1568 PDILALIGRAAETLRPDVQHLLAHLKTNPNSSIYAAAH 1605
>gi|297737648|emb|CBI26849.3| unnamed protein product [Vitis vinifera]
Length = 1550
Score = 2375 bits (6154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1230/1669 (73%), Positives = 1349/1669 (80%), Gaps = 175/1669 (10%)
Query: 20 SSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPFFNLRLLIRGLVACCGGILLIV 79
SSRAYQ HPAR++I+DLFNLYLGRSS QK +DS R+PP
Sbjct: 8 SSRAYQLHPARSSIVDLFNLYLGRSSHQKPEDSNREPP---------------------- 45
Query: 80 EEFMLRNKTQKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCC 139
NKTQKRV ALNRELPPRNEQFL+DF QLQSQF DQDQLRSVTES+LIS+VV C
Sbjct: 46 ------NKTQKRVTALNRELPPRNEQFLLDFGQLQSQFSDQDQLRSVTESILISLVVPCS 99
Query: 140 SHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQGSQAMPAVSATSLQQS 199
H PRAEF+LFALRSLCSIGYINWDTFLPSLLSSVSSAEMS GQG+QA+ +VS+TSL S
Sbjct: 100 GHAPRAEFLLFALRSLCSIGYINWDTFLPSLLSSVSSAEMSVGQGNQAVTSVSSTSLSPS 159
Query: 200 GMLPTSSGIPNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSDVSCTGQQ 259
GMLP+SS I NSS +QSSNPASPLPSVHGI SPAQSA + S C A+S
Sbjct: 160 GMLPSSSTIHNSSTFQSSNPASPLPSVHGISSPAQSATDPSPCVALS------------- 206
Query: 260 FTTRVNSSVRDNAISSLRQLCCKIILTGLEFSLKPVTHADIFYHMLNWLVTWDQKQQGID 319
PV +DI Q+QQ
Sbjct: 207 ----------------------------------PVKSSDI--------SCSGQQQQ--- 221
Query: 320 ESD-GKSWRLDKALIEWLHSCLDVIWLLVDEDRCRVPFYELLRTGLQFIENIPDDEALFT 378
ESD KSWR DKALIEWLHSCLDVIWL
Sbjct: 222 ESDVAKSWRPDKALIEWLHSCLDVIWL--------------------------------- 248
Query: 379 LILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPSVL 438
RRDMMAMHMQMLDQHL CPTFGTHR LSQTT IS EA NLRYSPI YPSVL
Sbjct: 249 -------RRDMMAMHMQMLDQHLQCPTFGTHRFLSQTTSPISGEAVANLRYSPIMYPSVL 301
Query: 439 GEPLHGEDLATSIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQGPTPG 498
GEPLHGEDLA SIQRGSLDWERA+RCIRHA+R TPSPDWWKRVLLVAPCYR+ QGP+ G
Sbjct: 302 GEPLHGEDLANSIQRGSLDWERALRCIRHALRTTPSPDWWKRVLLVAPCYRSHPQGPSAG 361
Query: 499 AVFTYDMISEAVIDRIVELLKLTNSEVNCWHDWLIFSDVFFFLVKSGCIDFVDFVDKLVS 558
AVFT +MI EA IDRIVELLKLTNS++NCW +WL+FSD+FFFL+K+GCIDFVDFVDKL+
Sbjct: 362 AVFTSEMICEATIDRIVELLKLTNSDINCWQEWLVFSDIFFFLMKNGCIDFVDFVDKLIL 421
Query: 559 RLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRKILSFHREDRCTDPNNP 618
RL +GDNHILRTNHVTWLLAQIIRVELVM AL SD RK+ETTRKILSFH+EDR +DPNNP
Sbjct: 422 RLIEGDNHILRTNHVTWLLAQIIRVELVMNALTSDPRKMETTRKILSFHKEDRSSDPNNP 481
Query: 619 QSILLDFISSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWRQVSKG------------ 666
QSILLDFISSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWR +KG
Sbjct: 482 QSILLDFISSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWRLANKGSSIGVATCTSGA 541
Query: 667 ---------------------------------DRMMDYMNMDDRSVGMFWVVSYTMAQP 693
+RMMDY+ +DDRS+GMFWV+SYTMAQP
Sbjct: 542 LLGGTTGVGSEGVAGSFSGMGKTKVDSSTTTTGERMMDYVTLDDRSIGMFWVMSYTMAQP 601
Query: 694 ACETVMNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMED 753
AC+TVMNW SSAG EL PGS+L NER+MVM+E++PLPMSLL+GFSL+LC+KLA QMED
Sbjct: 602 ACDTVMNWFSSAGAAELIPGSHLQSNERVMVMKEISPLPMSLLSGFSLHLCMKLAFQMED 661
Query: 754 SIFGGQVVASIAMVETYTRLMLLAPHSLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYR 813
S+F GQVV SIA+VETYTRL+L+APHSLFRS FSHL+QR P++L+K G T LVLEI+NYR
Sbjct: 662 SLFSGQVVPSIALVETYTRLLLIAPHSLFRSHFSHLSQRYPAILSKPGATLLVLEILNYR 721
Query: 814 LLPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILSQRDFFSLKREGK 873
LLPLYRYQGK KTLMYD+TKI+SALK KRGDHR RLAENLCMNLILS RD F +K+EGK
Sbjct: 722 LLPLYRYQGKGKTLMYDVTKIVSALKGKRGDHRAFRLAENLCMNLILSLRDPFQVKKEGK 781
Query: 874 GSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPS 933
G TEFTETLNRIT+I LAIIIKTRGIA+ADH+ YLQTMLEQIMATSQHTWSEKTLRYFPS
Sbjct: 782 GPTEFTETLNRITIITLAIIIKTRGIAEADHLPYLQTMLEQIMATSQHTWSEKTLRYFPS 841
Query: 934 LLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLC 993
LLR+A+IGRIDK+ L IQAWQQAETTVI QCT LL S DP+YV TY+SHSFPQHR+YLC
Sbjct: 842 LLREAMIGRIDKKNLAIQAWQQAETTVIAQCTNLLLSSGDPSYVMTYISHSFPQHRRYLC 901
Query: 994 AGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLL 1053
A A +LM GHP+NIN ANL RVLREFSPEEVTSNIYTMVDVLLHHIH+ELQ GHSLQDLL
Sbjct: 902 AAACMLMHGHPDNINVANLARVLREFSPEEVTSNIYTMVDVLLHHIHMELQHGHSLQDLL 961
Query: 1054 FKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIVITLLDRQELQQRVKLYCMNRG 1113
KACAN++FF+ T+ELLPLDILLLALIDRDDD HALRIVI+LLD+QELQQRVKL+C NRG
Sbjct: 962 SKACANLAFFIWTNELLPLDILLLALIDRDDDSHALRIVISLLDKQELQQRVKLFCNNRG 1021
Query: 1114 PPEHWLYSGLFKRVELQKALGNHLSWKERYPTFFDDIAARLLPVIPLIVYRLIENDAMDS 1173
PEHWL SG+FKR +LQKALGNHLSWKERYP FFDD AARLLPVIPL+VYRLIENDA D
Sbjct: 1022 SPEHWLCSGMFKRADLQKALGNHLSWKERYPVFFDDAAARLLPVIPLVVYRLIENDATDQ 1081
Query: 1174 ADRVLATYSSFLAYYPLRFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHI 1233
ADRVLA YS LAY+PLRF+FVRDILAYFYGHLPGKL VRILN+ DL KIPFSESF +H+
Sbjct: 1082 ADRVLAMYSQLLAYHPLRFTFVRDILAYFYGHLPGKLTVRILNILDLGKIPFSESFLKHM 1141
Query: 1234 SSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDAS---LRAPHNKSPMTSQSG 1290
SSSNPV+CPPLDYFATLLLGLVNNVIP +N NSKSGS D S LRAPHNK+P SQSG
Sbjct: 1142 SSSNPVICPPLDYFATLLLGLVNNVIPPINTNSKSGSMGDTSNNTLRAPHNKTPAASQSG 1201
Query: 1291 PSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQT 1350
P+N SEG+K FYQ QDPGT+TQLVLETAVIEILSLPV A+QIVSSLVQI+V+IQ TLIQ+
Sbjct: 1202 PTNASEGQKSFYQTQDPGTFTQLVLETAVIEILSLPVPATQIVSSLVQIIVHIQSTLIQS 1261
Query: 1351 SNGPYGASNSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSSFVSRSGYTCQQLSCL 1410
SNG +G N VGQGSVLPTSPSGGSTDSL ASRS+ SVSGIN S+FVSRSGYTCQQLSCL
Sbjct: 1262 SNGLHGPPNGVGQGSVLPTSPSGGSTDSLSASRSSASVSGINASNFVSRSGYTCQQLSCL 1321
Query: 1411 LIQACGLLLAQLPPDFHMQLYMEASRIIKESWWLADGKRSLGELDSAVGYALLDPTWAAQ 1470
LIQACGLLLAQLPPDFH QLY+EAS +IKESWWL DGKRSLGELDSAVGYALLDPTWAAQ
Sbjct: 1322 LIQACGLLLAQLPPDFHKQLYIEASCLIKESWWLTDGKRSLGELDSAVGYALLDPTWAAQ 1381
Query: 1471 DNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLRPITSVAMLRIVFRIMGPLLPRLV 1530
DNTSTAIGNIVALLH+FFSNLPQEWLEGTH+IIKHLRP+TSVAMLRI FRIMGPLLPRL
Sbjct: 1382 DNTSTAIGNIVALLHAFFSNLPQEWLEGTHLIIKHLRPVTSVAMLRIAFRIMGPLLPRLS 1441
Query: 1531 NAHTLFNKTLALLLNTMGDVYGKNTLPPAPVEASEIADLIDFLHHVVHYEGQGGPVQASS 1590
NAH+LFNKTL+LLLNTM DV+G+N+ P PVEASEIADLIDFLHH VHYEGQGGPVQASS
Sbjct: 1442 NAHSLFNKTLSLLLNTMVDVFGRNSQPATPVEASEIADLIDFLHHAVHYEGQGGPVQASS 1501
Query: 1591 KPRPEVLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYAATHPKMVQNPS 1639
KPRPEVL L GRA+ESLRP++QHLLSHLK D+NSSIYAATHPK+VQNPS
Sbjct: 1502 KPRPEVLALCGRASESLRPDIQHLLSHLKTDINSSIYAATHPKLVQNPS 1550
>gi|9295691|gb|AAF86997.1|AC005292_6 F26F24.8 [Arabidopsis thaliana]
Length = 1583
Score = 2365 bits (6128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1173/1649 (71%), Positives = 1343/1649 (81%), Gaps = 98/1649 (5%)
Query: 4 NQSQRSSIGAATASSASSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPFFNLRL 63
+QSQR+ A+ +SSR+YQFHPARAAIIDLFNLYLGR SRQK D+S+RDPP
Sbjct: 2 DQSQRT----VAATPSSSRSYQFHPARAAIIDLFNLYLGRGSRQKPDESLRDPP------ 51
Query: 64 LIRGLVACCGGILLIVEEFMLRNKTQKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQL 123
NK+QKRV A NR+LPPRNEQFL+DFE LQSQF
Sbjct: 52 ----------------------NKSQKRVHAPNRDLPPRNEQFLLDFELLQSQF------ 83
Query: 124 RSVTESVLISMVVQCCSHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQ 183
+V +F + SI YINWDTFLPSLLSSVS+AE S Q
Sbjct: 84 -----------------NVKSRFLTIFIFLFVISISYINWDTFLPSLLSSVSAAEASLSQ 126
Query: 184 GSQAMPAVSATSLQQSGMLPTSSGIPNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVCA 243
G QA A + +S S S S NP S LPS HGIGSP+ S ++
Sbjct: 127 GVQAAAATAGSSATSS----------QSVVPVSVNPTSLLPSAHGIGSPSASEVK----- 171
Query: 244 AMSPVKSSDVSCTGQ---QFTTRVNSSVRDNAISSLRQLCCKIILTGLEFSLKPVTHADI 300
S ++ GQ + R + +R A++SLRQL CKIIL G+E SLKPVTHA+I
Sbjct: 172 --SVENGQQIARAGQIVRENAMRNSQRIRAAAVNSLRQLSCKIILIGVESSLKPVTHAEI 229
Query: 301 FYHMLNWLVTWDQKQQGIDESDGKSWRLDKALIEWLHSCLDVIWLLVDEDRCRVPFYELL 360
F +M+NWLV WD++ G ++S GKSWR +K L EWL SCLDVIWLLV+E R+PFYELL
Sbjct: 230 FQYMMNWLVNWDRRDLGTEDSVGKSWRSEKTLAEWLRSCLDVIWLLVEEGESRIPFYELL 289
Query: 361 RTGLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTPNIS 420
R+GLQFIENIPDDEALFTLI+EIHRRRD MAMHM MLDQHLHCP+FGTHRI+SQ T N+
Sbjct: 290 RSGLQFIENIPDDEALFTLIMEIHRRRDAMAMHMLMLDQHLHCPSFGTHRIVSQITANVP 349
Query: 421 VEAAGNLRYSPITYPSVLGEPLHGEDLATSIQRGSLDWERAMRCIRHAIRATPSPDWWKR 480
EA +LR+SPITYPSVLGEPL+GEDLA SI +GSLDWERA+RCIRHAIR TPSPDWWKR
Sbjct: 350 PEAVPHLRHSPITYPSVLGEPLYGEDLAMSIPKGSLDWERAVRCIRHAIRTTPSPDWWKR 409
Query: 481 VLLVAPCYRNPAQ-GPTPGAVFTYDMISEAVIDRIVELLKLTNSE---VNCWHDWLIFSD 536
VL+VAPCYR Q GP PGAVFT DMI EA+IDRIVELLKLTNS NCW +WL+FSD
Sbjct: 410 VLVVAPCYRPSTQAGPIPGAVFTSDMICEAIIDRIVELLKLTNSGNVYANCWQEWLVFSD 469
Query: 537 VFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRK 596
+FFFL+KSGC DFVDF+DKLV RL DNHILRTNHVTWLLAQIIRVELVM ALNSD++K
Sbjct: 470 IFFFLIKSGCTDFVDFIDKLVLRLNGVDNHILRTNHVTWLLAQIIRVELVMTALNSDAKK 529
Query: 597 VETTRKILSFHREDRCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQKGKQI 656
VETTRKILSFHREDR +DPNNPQS+LLDF+SSCQNLRIWSL+T+TR YLNNEQL KGKQI
Sbjct: 530 VETTRKILSFHREDRNSDPNNPQSVLLDFVSSCQNLRIWSLSTTTRAYLNNEQLLKGKQI 589
Query: 657 DEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTELFPGSNL 716
DEWWR SKG+RMMDYMNMDDRS+GMFWVVSYTMAQPACETV+NWLSSAG+ EL PG L
Sbjct: 590 DEWWR--SKGERMMDYMNMDDRSIGMFWVVSYTMAQPACETVINWLSSAGMAEL-PG--L 644
Query: 717 PPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLL 776
PN+R+M+ +EV PLPMSLL+GFS+NLCLKLALQME+++F QVV SIAMVETYTRL+L+
Sbjct: 645 QPNDRVMMTQEVTPLPMSLLSGFSMNLCLKLALQMEEALFVSQVVPSIAMVETYTRLLLI 704
Query: 777 APHSLFRSLFS-------HLAQRNPSLLAKVGVTPLVLEIVNYRLLPLYRYQGKTKTLMY 829
+PHS+FRS FS LAQRN SLL+K GVT LVLEI+NYRLLPLYRYQGK+KTLMY
Sbjct: 705 SPHSMFRSHFSVSYLVPSQLAQRNASLLSKPGVTLLVLEILNYRLLPLYRYQGKSKTLMY 764
Query: 830 DITKIISALKVKRGDHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIA 889
D+TKIISALK KRGDHR+ RLAENLCMNLILS RDFFS+KREGKG TEFTETLNRIT++
Sbjct: 765 DVTKIISALKGKRGDHRIFRLAENLCMNLILSLRDFFSVKREGKGPTEFTETLNRITIMT 824
Query: 890 LAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLT 949
LAI IKTRGIAD DH++YLQTMLEQI+ATSQHTWSEKT+R+FPSLLR+ L GR+DKRGL+
Sbjct: 825 LAITIKTRGIADPDHMVYLQTMLEQILATSQHTWSEKTMRHFPSLLRETLKGRVDKRGLS 884
Query: 950 IQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINS 1009
IQAWQQAETTVINQCTQLLSPSA+P YV TYLSHSFPQHRQYLCAGA +LMQGH ENINS
Sbjct: 885 IQAWQQAETTVINQCTQLLSPSAEPAYVSTYLSHSFPQHRQYLCAGACLLMQGHAENINS 944
Query: 1010 ANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHEL 1069
NL RVLRE SPEEVT+NIYT+VDVLLHH+HV+LQ+G SL+ +L KA AN++FF THE+
Sbjct: 945 TNLARVLREVSPEEVTANIYTLVDVLLHHVHVDLQQGQSLEAVLDKAGANLAFFFWTHEM 1004
Query: 1070 LPLDILLLALIDRDDDPHALRIVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVEL 1129
LPLDI LLALIDRDDDPHAL I ++LL +L R+K YC NRG PEHWL + +FKR EL
Sbjct: 1005 LPLDIFLLALIDRDDDPHALIIAMSLLKTPDLLLRIKNYCQNRGSPEHWLVTQVFKRNEL 1064
Query: 1130 QKALGNHLSWKERYPTFFDDIAARLLPVIPLIVYRLIENDAMDSADRVLATYSSFLAYYP 1189
QKALGNHLSWK+RYPTFFDDIAARLLPVIPL++YRLIEN+AM+ AD +L +S FLAY+P
Sbjct: 1065 QKALGNHLSWKDRYPTFFDDIAARLLPVIPLVLYRLIENNAMEQADNLLLAHSHFLAYHP 1124
Query: 1190 LRFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFAT 1249
LRF+FVRDILAYFYGHLPGKL++R+L V DLSKIPFSESFPQ+IS + +CPPLDYFA+
Sbjct: 1125 LRFTFVRDILAYFYGHLPGKLVLRMLKVLDLSKIPFSESFPQYISPTGAPVCPPLDYFAS 1184
Query: 1250 LLLGLVNNVIPALNYNSKS-------GSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFY 1302
LLL LVNNVIP L+ +S +++S R PH K+P TSQ GP+N SEG+K FY
Sbjct: 1185 LLLNLVNNVIPPLSSSSNCSSRSGSMADILNSSARPPHGKTPGTSQPGPANASEGQKAFY 1244
Query: 1303 QNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVG 1362
Q QDPGTYTQLVLETAVIEILSLPVSA+QIVSSLVQI+VNIQ TLIQ+ NG +GA+N VG
Sbjct: 1245 QIQDPGTYTQLVLETAVIEILSLPVSAAQIVSSLVQIIVNIQSTLIQSGNGFHGAANGVG 1304
Query: 1363 QGSVLPTSPSGGSTDSLGASRSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQL 1422
QGSVLPTSPSGGSTDS+ ASRST + GINT+SFVSRSGYTCQQLSCLLIQACGLLLAQL
Sbjct: 1305 QGSVLPTSPSGGSTDSMSASRSTCLIPGINTASFVSRSGYTCQQLSCLLIQACGLLLAQL 1364
Query: 1423 PPDFHMQLYMEASRIIKESWWLADGKRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVA 1482
PPDFH+QLY+EA+R+ +E+WWL DGKRS GELDSAVGYAL+DPTWAAQDNTSTAIGNIVA
Sbjct: 1365 PPDFHVQLYLEAARVTRETWWLKDGKRSQGELDSAVGYALMDPTWAAQDNTSTAIGNIVA 1424
Query: 1483 LLHSFFSNLPQEWLEGTHVIIKHLRPITSVAMLRIVFRIMGPLLPRLVNAHTLFNKTLAL 1542
LLH+FFSNLPQEWL+GT+ II +LRP+TSVAMLR+VFRIMGPLLPRL + HTLFNKTL L
Sbjct: 1425 LLHAFFSNLPQEWLDGTNAIITNLRPVTSVAMLRVVFRIMGPLLPRLASTHTLFNKTLML 1484
Query: 1543 LLNTMGDVYGKNTLPPAPVEASEIADLIDFLHHVVHYEGQGGPVQASSKPRPEVLVLTGR 1602
LL+ + DV+GK APVEAS+IADLIDFLHH++HYEGQGG VQ SSKPRP++L L GR
Sbjct: 1485 LLSALVDVFGKTAQTTAPVEASQIADLIDFLHHIIHYEGQGGAVQTSSKPRPDILALIGR 1544
Query: 1603 AAESLRPEVQHLLSHLKPDVNSSIYAATH 1631
AAE+LRP+VQHLL+HLK + NSSIYAA H
Sbjct: 1545 AAETLRPDVQHLLAHLKTNPNSSIYAAAH 1573
>gi|115448499|ref|NP_001048029.1| Os02g0732700 [Oryza sativa Japonica Group]
gi|46390660|dbj|BAD16142.1| unknown protein [Oryza sativa Japonica Group]
gi|113537560|dbj|BAF09943.1| Os02g0732700 [Oryza sativa Japonica Group]
gi|222623623|gb|EEE57755.1| hypothetical protein OsJ_08276 [Oryza sativa Japonica Group]
Length = 1620
Score = 2215 bits (5740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1107/1662 (66%), Positives = 1325/1662 (79%), Gaps = 65/1662 (3%)
Query: 1 MDQNQSQRSSIGAATASSA---SSRAYQFH-----PARAAIIDLFNLYLGRSSRQKQDDS 52
MD QR + A ++SA R Q H PAR++I DLF LYLG +S+Q+ +D
Sbjct: 1 MDGAHGQRQPMSPAISASAVLPQQRQMQLHHHHHHPARSSIADLFTLYLGMNSKQRVEDP 60
Query: 53 IRDPPFFNLRLLIRGLVACCGGILLIVEEFMLRNKTQKRVLALNRELPPRNEQFLIDFEQ 112
R+ NK QKRV A+NR+LPPR+EQF+ DFEQ
Sbjct: 61 TRE----------------------------TSNKLQKRVTAMNRDLPPRDEQFISDFEQ 92
Query: 113 LQSQFPDQDQLRSVTESVLISMVVQCCSHVPRAEFILFALRSLCSIGYINWDTFLPSLLS 172
L QFPDQ+QL++VTESVLIS V+QC SH P++EF+LFA R LC+ G++ WD+ LPSLL+
Sbjct: 93 LHMQFPDQEQLQAVTESVLISFVLQCSSHAPQSEFLLFATRCLCARGHLRWDSLLPSLLN 152
Query: 173 SVSSAEMSAGQG---SQAMPAVSATSLQQSGMLPTSSGIPNSSNYQSSNPASPLPSVHGI 229
VSS E+ GQG + PA S++S + +PN+ ++ SNP SPL +++ I
Sbjct: 153 VVSSVEVPMGQGVSVTTGGPATSSSS---------AIAVPNAPSFHPSNPTSPLSAMNTI 203
Query: 230 GSPAQSAIETSVCAAMSPVKSSDVSCTGQ-QFTTRVNSSVRDNAISSLRQLCCKIILTGL 288
GSP QS I+ + A +SP+K ++ S GQ T R + S R IS L L C+IIL GL
Sbjct: 204 GSPTQSGIDQPIGANVSPIKGAEFSSPGQLGLTARGDQSRRGAEISYLHHLSCRIILAGL 263
Query: 289 EFSLKPVTHADIFYHMLNWLVTWDQKQQGIDESDG---KSWRLDKALIEWLHSCLDVIWL 345
E LKP THA IF HM+NWLV WDQ+ G+D++D ++ RL++ L EW+H CLDVIW+
Sbjct: 264 ESDLKPATHAVIFQHMVNWLVNWDQRPHGVDQADALQLQTLRLERPLHEWMHLCLDVIWI 323
Query: 346 LVDEDRCRVPFYELLRTGLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPT 405
LV+ED+CRVPFYEL+R+ LQF+ENIPDDEAL ++I+EIHRRRDM+ MHMQMLDQHLHCPT
Sbjct: 324 LVNEDKCRVPFYELVRSNLQFLENIPDDEALVSIIMEIHRRRDMVCMHMQMLDQHLHCPT 383
Query: 406 FGTHRILSQTTPNISVEAAGNLRYSPITYPSVLGEPLHGEDLATSIQRGSLDWERAMRCI 465
F THR LSQ+ P+I+ E+ NLRYSPITYPSVLGEPLHGEDLA SI +G LDWERA+RC+
Sbjct: 384 FATHRFLSQSYPSIAGESVANLRYSPITYPSVLGEPLHGEDLANSIPKGGLDWERALRCL 443
Query: 466 RHAIRATPSPDWWKRVLLVAPCYR-NPAQGPTPGAVFTYDMISEAVIDRIVELLKLTNSE 524
RHA+R TPSPDWW+RVLLVAPCYR +P Q TPGAVF+ DMI EAV DR +ELL+LTNSE
Sbjct: 444 RHALRTTPSPDWWRRVLLVAPCYRQHPQQSSTPGAVFSPDMIGEAVADRTIELLRLTNSE 503
Query: 525 VNCWHDWLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVE 584
CW DWL+F+D+FFFL+KSGCIDF+DFVDKL SR+ + D ILR+NHVTWLLAQIIR+E
Sbjct: 504 TQCWQDWLLFADIFFFLMKSGCIDFLDFVDKLASRVTNSDQQILRSNHVTWLLAQIIRIE 563
Query: 585 LVMGALNSDSRKVETTRKILSFHREDRCTDPNN--PQSILLDFISSCQNLRIWSLNTSTR 642
+VM L+SD RKVETTRKI+SFH+ED+ DPNN PQSILLDFISS Q LRIWS NTS R
Sbjct: 564 IVMNTLSSDPRKVETTRKIISFHKEDKSLDPNNISPQSILLDFISSSQTLRIWSFNTSIR 623
Query: 643 EYLNNEQLQKGKQIDEWWRQVSK--GDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMN 700
E+LN++QLQKGKQIDEWWRQ++K G+RM+D+ ++D+R++GMFWV+S+TMAQPACE VMN
Sbjct: 624 EHLNSDQLQKGKQIDEWWRQMTKASGERMIDFTSLDERAMGMFWVLSFTMAQPACEAVMN 683
Query: 701 WLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQV 760
W +S GV +L G NL PNER+ +MRE PL MSLL+G S+NLCLKLA Q+E++IF GQ
Sbjct: 684 WFTSVGVADLIQGPNLQPNERMTMMRETYPLSMSLLSGLSINLCLKLAFQLEETIFLGQN 743
Query: 761 VASIAMVETYTRLMLLAPHSLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRLLPLYRY 820
V SIA+VETY RL+L+ PHSLFR F+ L QR+PS+L+K GV+ L+LEI+NYRLLPLYRY
Sbjct: 744 VPSIAIVETYVRLLLITPHSLFRPHFTTLTQRSPSILSKSGVSLLLLEILNYRLLPLYRY 803
Query: 821 QGKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTE 880
GK+K LMYD+TKIIS +KVKRG+HR+ RLAENLCMNLILS RDFF +K+E KG TEFTE
Sbjct: 804 HGKSKALMYDVTKIISMIKVKRGEHRLFRLAENLCMNLILSLRDFFLVKKELKGPTEFTE 863
Query: 881 TLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALI 940
TLNRIT+I+LAI +KTRGIA+ +H+++LQ +LEQIMATSQHTWSEKTLRYFP L+RD L+
Sbjct: 864 TLNRITIISLAITMKTRGIAEVEHIIHLQPLLEQIMATSQHTWSEKTLRYFPPLIRDFLM 923
Query: 941 GRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILM 1000
GR+DKRG IQAWQQAETTVINQC QLLSPSA+PTYV TYLSHSFPQHRQYLCAGAW+LM
Sbjct: 924 GRMDKRGQAIQAWQQAETTVINQCNQLLSPSAEPTYVMTYLSHSFPQHRQYLCAGAWMLM 983
Query: 1001 QGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANI 1060
GH E INSANL RVLREFSPEEVT+NIYTMVDVLLHHI +ELQRGH +QDLL KA N+
Sbjct: 984 NGHLE-INSANLARVLREFSPEEVTANIYTMVDVLLHHIQLELQRGHQIQDLLSKAITNL 1042
Query: 1061 SFFVLTHELLPLDILLLALIDRDDDPHALRIVITLLDRQELQQRVKLYCMNRGPPEHWLY 1120
+FF+ THELLPLDILLLALIDRDDDP+ALR+VI LL+R ELQQR+K +C +R PEHWL
Sbjct: 1043 AFFIWTHELLPLDILLLALIDRDDDPYALRLVINLLERPELQQRIKAFCTSRS-PEHWLK 1101
Query: 1121 SGLFKRVELQKALGNHLSWKERYPTFFDDIAARLLPVIPLIVYRLIENDAMDSADRVLAT 1180
+ KRVELQKALGNHLS KERYP FFDDIAARLL VIPLI+YRLIENDA D ADRVLA
Sbjct: 1102 NQPPKRVELQKALGNHLSGKERYPPFFDDIAARLLLVIPLIIYRLIENDATDIADRVLAV 1161
Query: 1181 YSSFLAYYPLRFSFVRDILAYFYGHLPGKLIVRILNVFDLS-KIPFSESFPQHISSSNPV 1239
YS+FLA++PLRF+FVRDILAYFYGHLP KLIVRILNV +S K PFSESF Q+++SSN
Sbjct: 1162 YSTFLAFHPLRFTFVRDILAYFYGHLPSKLIVRILNVLGVSTKTPFSESFAQYLASSNSS 1221
Query: 1240 MCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDA--SLRAPHNKSPMTSQSGPSNVSEG 1297
+CPP +YFA LL GLVNNVIP L+ SKS + A + R +NK P TS +G + S+G
Sbjct: 1222 ICPPPEYFANLLFGLVNNVIPPLSCKSKSNPSDAAGSTARTTYNK-PYTSSAGGISNSDG 1280
Query: 1298 RKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGA 1357
++ FYQNQDPG+YTQLVLETA IEILSL V ASQIVSSLVQI+ ++Q LIQ+++G +G
Sbjct: 1281 QRAFYQNQDPGSYTQLVLETAAIEILSLCVPASQIVSSLVQIIAHVQAMLIQSNSG-HGM 1339
Query: 1358 SNSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGL 1417
S +GQ S +PTS SGG + +GA+R + SGIN S+FVSRSGY+CQQLS L+IQACGL
Sbjct: 1340 SGGLGQNSGVPTS-SGGGVEPVGANRPNTTASGINASNFVSRSGYSCQQLSVLMIQACGL 1398
Query: 1418 LLAQLPPDFHMQLYMEASRIIKESWWLADGKRSLGELDSAVGYALLDPTWAAQDNTSTAI 1477
LLAQLPP+FH LY EA+RIIK+ WWLAD R + ELDSAVGYALLDPTWA+QDNTSTAI
Sbjct: 1399 LLAQLPPEFHTLLYAEAARIIKDCWWLADSSRPVKELDSAVGYALLDPTWASQDNTSTAI 1458
Query: 1478 GNIVALLHSFFSNLPQEWLEGTHVIIKHLRPITSVAMLRIVFRIMGPLLPRLVNAHTLFN 1537
GNIVALLHSFFSNLP EWLE TH +IKHLRP+ SVAMLRI FRI+GPLLPRL A LF
Sbjct: 1459 GNIVALLHSFFSNLPHEWLESTHTVIKHLRPVNSVAMLRIAFRILGPLLPRLAFARPLFM 1518
Query: 1538 KTLALLLNTMGDVYGKNTLPPAPVEASEIADLIDFLHHVVHYEGQGGPVQASSKPRPEVL 1597
KTLALL N +GDV+GKN+ PVEASEIAD+IDFLHH V YEGQGGPVQ++SKP+ E+L
Sbjct: 1519 KTLALLFNVLGDVFGKNSQASPPVEASEIADIIDFLHHAVMYEGQGGPVQSTSKPKLEIL 1578
Query: 1598 VLTGRAAESLRPEVQHLLSHLKPDVNSSIYAATHPKMVQNPS 1639
L G+ E LRP+VQHLLSHLK D NSS+YAATHPK+VQNPS
Sbjct: 1579 TLCGKVMEILRPDVQHLLSHLKTDPNSSVYAATHPKLVQNPS 1620
>gi|242062622|ref|XP_002452600.1| hypothetical protein SORBIDRAFT_04g028840 [Sorghum bicolor]
gi|241932431|gb|EES05576.1| hypothetical protein SORBIDRAFT_04g028840 [Sorghum bicolor]
Length = 1613
Score = 2172 bits (5628), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1101/1656 (66%), Positives = 1315/1656 (79%), Gaps = 60/1656 (3%)
Query: 1 MDQNQSQRSSIGAATASSA---SSRAYQFH--PARAAIIDLFNLYLGRSSRQKQDDSIRD 55
MD R + A ++SA R Q H PAR AI DLF LYLG +S+Q+ +D +R+
Sbjct: 1 MDGGHGTRQPMSPAISASAVLPQQRQMQLHHHPARPAIADLFTLYLGMNSKQRAEDPLRE 60
Query: 56 PPFFNLRLLIRGLVACCGGILLIVEEFMLRNKTQKRVLALNRELPPRNEQFLIDFEQLQS 115
P NK QKRV ALNR+LPPR+EQF+ D+EQL+
Sbjct: 61 SP----------------------------NKLQKRVTALNRDLPPRDEQFISDYEQLRM 92
Query: 116 QFPDQDQLRSVTESVLISMVVQCCSHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVS 175
FPD +QL++VTESVLIS V+QC SH P++EF+LFA R LC+ G++ WD+ LPSLL++VS
Sbjct: 93 PFPDAEQLQAVTESVLISFVLQCSSHAPQSEFLLFATRCLCARGHLRWDSLLPSLLNTVS 152
Query: 176 SAEMSAGQGSQAMPAVSATSLQQSGMLPTSSGI--PNSSNYQSSNPASPLPSVHGIGSPA 233
S E P V S+ G SS I PN+ N+ SNPASPL ++ IGSP
Sbjct: 153 SIEA---------PMVQGVSVTGGGPATPSSAITMPNAPNFHPSNPASPLSVMNTIGSPT 203
Query: 234 QSAIETSVCAAMSPVKSSDVSCTGQQFTT-RVNSSVRDNAISSLRQLCCKIILTGLEFSL 292
QS I+ V A +SP+K+++ S + Q T R + S R S L L C+IIL GLEF+L
Sbjct: 204 QSGIDQPVGANVSPIKAAEFSSSAQLGTAARGDQSRRGAEASYLHHLSCRIILAGLEFNL 263
Query: 293 KPVTHADIFYHMLNWLVTWDQKQQGIDESDG-KSWRLDKALIEWLHSCLDVIWLLVDEDR 351
KP THA IF HM+NWLV WDQ+ G+DE+D ++ RL+K L EW+H CLDVIW+LV+ED+
Sbjct: 264 KPATHAVIFQHMVNWLVNWDQRPHGMDEADAMQTCRLEKPLHEWMHLCLDVIWILVNEDK 323
Query: 352 CRVPFYELLRTGLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRI 411
CR+PFYEL+R LQF+ENIPDDEAL ++I+EIHRRRDM+ MHMQMLDQHLHCPTFGTHR
Sbjct: 324 CRIPFYELVRCNLQFLENIPDDEALVSIIMEIHRRRDMVCMHMQMLDQHLHCPTFGTHRF 383
Query: 412 LSQTTPNISVEAAGNLRYSPITYPSVLGEPLHGEDLATSIQRGSLDWERAMRCIRHAIRA 471
LSQ+ P+I+ E+ NLRYSPITYPSVLGEPLHGEDLA SI +G LDWERA+RC+RHA+R
Sbjct: 384 LSQSYPSIAGESVTNLRYSPITYPSVLGEPLHGEDLANSIPKGGLDWERALRCLRHALRT 443
Query: 472 TPSPDWWKRVLLVAPCYRNPAQ-GPTPGAVFTYDMISEAVIDRIVELLKLTNSEVNCWHD 530
TPSPDWW+RVLLVAPCYR+ +Q TPGAVF+ DMI EAV DR +ELL+LTNSE CW D
Sbjct: 444 TPSPDWWRRVLLVAPCYRSQSQQSSTPGAVFSPDMIGEAVADRTIELLRLTNSETQCWQD 503
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
WL+F+D+FFFL+KSGCIDF+DFVDKL SR+ + D ILR+NHVTWLLAQIIR+E+VM L
Sbjct: 504 WLLFADIFFFLMKSGCIDFLDFVDKLASRVTNSDQQILRSNHVTWLLAQIIRIEIVMNTL 563
Query: 591 NSDSRKVETTRKILSFHREDRCTDPNN--PQSILLDFISSCQNLRIWSLNTSTREYLNNE 648
+SD RKVETTRKI+SFH+ED+ D NN PQSILLDFISS Q LRIWS NTS RE+LN++
Sbjct: 564 SSDPRKVETTRKIISFHKEDKSLDANNIGPQSILLDFISSSQTLRIWSFNTSIREHLNSD 623
Query: 649 QLQKGKQIDEWWRQVSK--GDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAG 706
QLQKGKQIDEWW+Q++K G+RM+D+ N+D+R+ GMFWV+S+TMAQPACE VMNW +SAG
Sbjct: 624 QLQKGKQIDEWWKQMTKASGERMIDFTNLDERATGMFWVLSFTMAQPACEAVMNWFTSAG 683
Query: 707 VTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASIAM 766
+ +L G N+ P+ER+M+MRE PL MSLL+G S+NLCLKLA Q+E++IF GQ V SIAM
Sbjct: 684 MADLIQGPNMQPSERIMMMRETYPLSMSLLSGLSINLCLKLAFQLEETIFLGQAVPSIAM 743
Query: 767 VETYTRLMLLAPHSLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRLLPLYRYQGKTKT 826
VETY RL+L+APHSLFR F+ L QR+PS+L+K GV+ L+LEI+NYRLLPLYRY GK+K
Sbjct: 744 VETYVRLLLIAPHSLFRPHFTTLTQRSPSILSKSGVSLLLLEILNYRLLPLYRYHGKSKA 803
Query: 827 LMYDITKIISALKVKRGDHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRIT 886
LMYD+TKIIS +K KRG+HR+ RLAENLCMNLILS +DFF +K+E KG TEFTETLNRIT
Sbjct: 804 LMYDVTKIISMIKGKRGEHRLFRLAENLCMNLILSLKDFFFVKKELKGPTEFTETLNRIT 863
Query: 887 VIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKR 946
+I+LAI IKTRGIA+ +H++YLQ +LEQIMATSQHTWSEKTLRYFP L+RD L+GR+DKR
Sbjct: 864 IISLAITIKTRGIAEVEHMIYLQPLLEQIMATSQHTWSEKTLRYFPPLIRDFLMGRMDKR 923
Query: 947 GLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPEN 1006
G IQAWQQAETTVINQC QLLSPSA+P YV TYLSHSFPQHRQYLCAGAW+LM GH E
Sbjct: 924 GQAIQAWQQAETTVINQCNQLLSPSAEPNYVMTYLSHSFPQHRQYLCAGAWMLMNGHLE- 982
Query: 1007 INSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLT 1066
INSANL RVLREFSPEEVT+NIYTMVDVLLHHI E+QR H QDLL KA N+SFF+ T
Sbjct: 983 INSANLARVLREFSPEEVTANIYTMVDVLLHHIQFEVQRQHLAQDLLSKAITNLSFFIWT 1042
Query: 1067 HELLPLDILLLALIDRDDDPHALRIVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKR 1126
HELLPLDILLLALIDRDDDP+ALR+VI+LL++ ELQQRVK +C R PEHWL + KR
Sbjct: 1043 HELLPLDILLLALIDRDDDPYALRLVISLLEKPELQQRVKNFCNTRS-PEHWLKNQHPKR 1101
Query: 1127 VELQKALGNHLSWKERYPTFFDDIAARLLPVIPLIVYRLIENDAMDSADRVLATYSSFLA 1186
ELQKALG+HLSWK+RYP FFDDIAARLLPVIPLI+YRLIENDA D ADRVLA YSS LA
Sbjct: 1102 AELQKALGSHLSWKDRYPPFFDDIAARLLPVIPLIIYRLIENDATDIADRVLAFYSSLLA 1161
Query: 1187 YYPLRFSFVRDILAYFYGHLPGKLIVRILNVFDLS-KIPFSESFPQHISSSNPVMCPPLD 1245
++PLRF+FVRDILAYFYGHLP KLI RILN+ +S K PFSESF +++ SSN +CPP +
Sbjct: 1162 FHPLRFTFVRDILAYFYGHLPIKLIGRILNLLGVSTKTPFSESFAKYLVSSNSSVCPPPE 1221
Query: 1246 YFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQ 1305
YFA LLL LVNNVIP L +SKS S + R+ NK +SQ G ++G++ FYQNQ
Sbjct: 1222 YFANLLLNLVNNVIPPL--SSKSKSNPADTTRSTFNKHHASSQPGGVGNTDGQRAFYQNQ 1279
Query: 1306 DPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGS 1365
DPG+YTQLVLETA IEILSLPV A+QIVSSLVQI+ ++Q LIQ+++G G S +GQ S
Sbjct: 1280 DPGSYTQLVLETAAIEILSLPVPAAQIVSSLVQIIAHVQAMLIQSNSG-QGMSGGLGQSS 1338
Query: 1366 VLPTSPSGGSTDSLGASRSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPD 1425
LPTSPSG + +S G +++ + SGIN ++FVSRSGY+CQQLS L+IQACGLLLAQLPP+
Sbjct: 1339 GLPTSPSGAA-ESSGPNQANSAASGINATNFVSRSGYSCQQLSVLMIQACGLLLAQLPPE 1397
Query: 1426 FHMQLYMEASRIIKESWWLADGKRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLH 1485
FHMQLY EA+R+IK+ WWLAD R + ELDSAVGYALLDPTWA+QDNTSTAIGNIVALLH
Sbjct: 1398 FHMQLYSEAARVIKDCWWLADSSRPVKELDSAVGYALLDPTWASQDNTSTAIGNIVALLH 1457
Query: 1486 SFFSNLPQEWLEGTHVIIKHLRPITSVAMLRIVFRIMGPLLPRLVNAHTLFNKTLALLLN 1545
SFFSNLPQEWLE TH +IKHLRP+ SVAMLRI FRI+GPLLPRL A LF KTLALL N
Sbjct: 1458 SFFSNLPQEWLESTHTVIKHLRPVNSVAMLRIAFRILGPLLPRLAFARPLFMKTLALLFN 1517
Query: 1546 TMGDVYGKN--TLPPAPVEASEIADLIDFLHHVVHYEGQGGPVQASSKPRPEVLVLTGRA 1603
+GDV+GKN P PVEASEIAD+IDFLHH V YEGQGGPVQ++SKP+ E+L L G+
Sbjct: 1518 VLGDVFGKNPPVSNPNPVEASEIADIIDFLHHAVMYEGQGGPVQSTSKPKLEILTLCGKV 1577
Query: 1604 AESLRPEVQHLLSHLKPDVNSSIYAATHPKMVQNPS 1639
E LRP+VQHLLSHLK D SSIYAATHPK+VQ+ S
Sbjct: 1578 IEILRPDVQHLLSHLKIDPASSIYAATHPKLVQSSS 1613
>gi|357143682|ref|XP_003573012.1| PREDICTED: uncharacterized protein LOC100841446 [Brachypodium
distachyon]
Length = 1618
Score = 2156 bits (5586), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1090/1655 (65%), Positives = 1310/1655 (79%), Gaps = 70/1655 (4%)
Query: 7 QRSSIGAATASSA---SSRAYQFH--PARAAIIDLFNLYLGRSSRQKQDDSIRDPPFFNL 61
QR + A ++SA R Q H PAR AI DLF LYLG +S+Q+ +D R+
Sbjct: 12 QRQPLSPAISASAVLPHQRQMQLHQHPARPAIADLFTLYLGMNSKQRAEDPARE------ 65
Query: 62 RLLIRGLVACCGGILLIVEEFMLRNKTQKRVLALNRELPPRNEQFLIDFEQLQSQFPDQD 121
NK QKRV AL+R+LPPR+EQF+ DFEQL+ FPDQ+
Sbjct: 66 ----------------------TANKLQKRVSALSRDLPPRDEQFIPDFEQLRMPFPDQE 103
Query: 122 QLRSVTESVLISMVVQCCSHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEMSA 181
QL++VTESVLIS V+QC SH P++EF+LFA R LC+ G++ WD+ LPSLLS+VSS E
Sbjct: 104 QLQAVTESVLISFVLQCSSHAPKSEFLLFATRCLCARGHLRWDSLLPSLLSAVSSVEAPM 163
Query: 182 GQGSQAM---PAVSATSLQQSGMLPTSSGIPNSSNYQSSNPASPLPSVHGIGSPAQSAIE 238
QG P S++S + P+ + +SNP SPL +++ IGSP QS I+
Sbjct: 164 AQGGAVTVGGPVSSSSSAIVAPSAPS---------FHASNPTSPLSAMNTIGSPTQSGID 214
Query: 239 TSVCAAMSPVKSSDVSCTGQQFTT-RVNSSVRDNAISSLRQLCCKIILTGLEFSLKPVTH 297
+ A SP+K ++ S GQ T R + S R IS L L C+IIL GLE SLKP T
Sbjct: 215 QPIGANASPIKRTEFSTPGQLGTAARGDQSRRGEEISYLHHLSCRIILAGLESSLKPATL 274
Query: 298 ADIFYHMLNWLVTWDQKQQGIDESDG-KSWRLDKALIEWLHSCLDVIWLLVDEDRCRVPF 356
A IF HM+NWLV WDQ+ G+DE+D ++WR+ + + EW+H CLDVIW+LVDE++CRVPF
Sbjct: 275 AVIFQHMVNWLVNWDQRPHGVDEADTTQTWRIGRPVHEWMHLCLDVIWILVDEEKCRVPF 334
Query: 357 YELLRTGLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILSQTT 416
YEL+R+ LQF+ENIPDD+AL ++I+EIHRRRDM+ MHMQMLDQHLHCPTFGTHR LSQ+
Sbjct: 335 YELVRSNLQFLENIPDDDALVSIIMEIHRRRDMVCMHMQMLDQHLHCPTFGTHRFLSQSY 394
Query: 417 PNISVEAAGNLRYSPITYPSVLGEPLHGEDLATSIQRGSLDWERAMRCIRHAIRATPSPD 476
P+I+ E+ NLRYSPITYPSVLGEPLHGEDLA SI +G LDWERA+RC+RHA+R TPSPD
Sbjct: 395 PSIAGESVANLRYSPITYPSVLGEPLHGEDLANSIPKGGLDWERALRCLRHALRTTPSPD 454
Query: 477 WWKRVLLVAPCYRNPAQ-GPTPGAVFTYDMISEAVIDRIVELLKLTNSEVNCWHDWLIFS 535
WW+RVLLVAPCYR+ +Q TPGAVF+ DMI EAV DR +ELL+ TNSE CW DWL+F+
Sbjct: 455 WWRRVLLVAPCYRSHSQQSSTPGAVFSPDMIGEAVADRTIELLRFTNSETQCWQDWLLFA 514
Query: 536 DVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSR 595
D+FFFL+KSGCIDF+DFVDKL SR+ + D ILR+NHVTWLLAQIIR+E+VM L+SD R
Sbjct: 515 DIFFFLMKSGCIDFLDFVDKLASRVTNSDQQILRSNHVTWLLAQIIRIEIVMNTLSSDPR 574
Query: 596 KVETTRKILSFHREDRCTDPNN--PQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQKG 653
KVETTRKI+SFH+ED+ DPNN PQSILLDFISS Q LRIWS NTS RE+LNN+QLQKG
Sbjct: 575 KVETTRKIISFHKEDKSLDPNNVSPQSILLDFISSSQTLRIWSFNTSIREHLNNDQLQKG 634
Query: 654 KQIDEWWRQVSK--GDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTELF 711
KQIDEWW+Q++K G+RM+D+MN+D+R++GMFWV+S+TMAQPACE VMNW +SAG T++
Sbjct: 635 KQIDEWWKQMTKASGERMIDFMNLDERAMGMFWVLSFTMAQPACEAVMNWFTSAG-TDVI 693
Query: 712 PGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYT 771
G N+ PNER+ +MRE PL MSLL+G S+NLCLKLA Q+EDSIF GQ V SIAMVETY
Sbjct: 694 QGPNMQPNERIAMMRETCPLSMSLLSGLSINLCLKLAFQLEDSIFLGQAVPSIAMVETYV 753
Query: 772 RLMLLAPHSLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRLLPLYRYQGKTKTLMYDI 831
RL+L+ PHSLFR F+ L QR+PS+L+K GV+ L+LEI+NYRLLPLYRY GK+K LMYD+
Sbjct: 754 RLLLITPHSLFRPHFTTLTQRSPSILSKSGVSLLLLEILNYRLLPLYRYHGKSKALMYDV 813
Query: 832 TKIISALKVKRGDHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALA 891
TKIIS +K KRG+HR+ RLAENLCMNLILS RDFF +K+E KG TEFTETLNRIT+I+LA
Sbjct: 814 TKIISMIKGKRGEHRMFRLAENLCMNLILSLRDFFLVKKELKGPTEFTETLNRITIISLA 873
Query: 892 IIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQ 951
I IKTRGIA+ +H++YLQ +LEQIMATSQHTWSEKTLRYFP L+RD L+GR+DKRG IQ
Sbjct: 874 ITIKTRGIAEVEHMIYLQPLLEQIMATSQHTWSEKTLRYFPPLIRDFLMGRMDKRGHAIQ 933
Query: 952 AWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSAN 1011
AWQQAETTVINQC QLLSPSA+P YV TYL+HSF HRQYLCAGAW+LM GH E INSAN
Sbjct: 934 AWQQAETTVINQCNQLLSPSAEPNYVMTYLNHSFALHRQYLCAGAWMLMNGHLE-INSAN 992
Query: 1012 LLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLP 1071
L RVLREFSPEEVT+NIYTMVDVLLHHI +ELQ GH +Q+LL KA N++FF+ THELLP
Sbjct: 993 LARVLREFSPEEVTANIYTMVDVLLHHIQLELQHGHLVQELLSKAIKNLAFFIWTHELLP 1052
Query: 1072 LDILLLALIDRDDDPHALRIVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQK 1131
LDILLLALIDRDDDP+ALR+VI LL+R ELQQR+K +C + EHWL + KR ELQK
Sbjct: 1053 LDILLLALIDRDDDPYALRLVINLLERTELQQRIKAFC-SSCSSEHWLKNQPPKRAELQK 1111
Query: 1132 ALGNHLSWKERYPTFFDDIAARLLPVIPLIVYRLIENDAMDSADRVLATYSSFLAYYPLR 1191
ALGNHLSWK+RYP FFDDIAARLLPVIPLI+YRLIENDA D ADRVLA YS+FLA++PLR
Sbjct: 1112 ALGNHLSWKDRYPPFFDDIAARLLPVIPLIIYRLIENDATDIADRVLAFYSNFLAFHPLR 1171
Query: 1192 FSFVRDILAYFYGHLPGKLIVRILNVFDLS-KIPFSESFPQHISSSNPVMCPPLDYFATL 1250
F+FVRDILAYFYGHLP KLIVR+L+V S K PFSESF Q++ S +CPP +YFA L
Sbjct: 1172 FTFVRDILAYFYGHLPSKLIVRVLSVLGASIKTPFSESFTQYLGPS--TICPPQEYFANL 1229
Query: 1251 LLGLVNNVIPALNYNSK------SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQN 1304
LL LVNNVIP L+ SK SG+ S PH ++Q+G + ++G++ FYQN
Sbjct: 1230 LLSLVNNVIPPLSSKSKSHPADASGNAGRTSFSKPH----ASAQAGGISNTDGQRAFYQN 1285
Query: 1305 QDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQG 1364
QDPG+YTQLVLETA IEILSLPVSASQIV+SLVQ++ ++Q LIQ+++G G S +GQ
Sbjct: 1286 QDPGSYTQLVLETAAIEILSLPVSASQIVTSLVQLIAHVQAMLIQSNSG-QGMSGGLGQN 1344
Query: 1365 SVLPTSPSGGSTDSLGASRSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPP 1424
S LPTSPSGG ++ G +R+ S SGI +++FVSRSGY+CQQLS L+IQACGLLLAQLPP
Sbjct: 1345 SGLPTSPSGGGAEAAGGNRANTSASGI-SANFVSRSGYSCQQLSVLMIQACGLLLAQLPP 1403
Query: 1425 DFHMQLYMEASRIIKESWWLADGKRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALL 1484
+FHMQLY EA+RIIK+ WLAD R + ELDSAVGYALLDPTWA+QDNTSTAIGN+VALL
Sbjct: 1404 EFHMQLYSEAARIIKDCRWLADSSRPVKELDSAVGYALLDPTWASQDNTSTAIGNVVALL 1463
Query: 1485 HSFFSNLPQEWLEGTHVIIKHLRPITSVAMLRIVFRIMGPLLPRLVNAHTLFNKTLALLL 1544
HSFFSNLPQEWL+ TH +IKHLRP+ SVAMLRI FRI+GPLLPRL A LF KTLALL
Sbjct: 1464 HSFFSNLPQEWLDSTHTVIKHLRPVNSVAMLRIAFRILGPLLPRLAFARPLFMKTLALLF 1523
Query: 1545 NTMGDVYGKNTLPPAPVEASEIADLIDFLHHVVHYEGQGGPVQASSKPRPEVLVLTGRAA 1604
N +GDV+GKN+ VEASEIAD+IDFLHH V YEGQGGPVQ++SKP+ E+L L G+
Sbjct: 1524 NVLGDVFGKNSQASPHVEASEIADIIDFLHHAVMYEGQGGPVQSTSKPKLEILTLCGKVM 1583
Query: 1605 ESLRPEVQHLLSHLKPDVNSSIYAATHPKMVQNPS 1639
E LRP+VQHLLSHLK D+NSSIYAATHPK+VQ+PS
Sbjct: 1584 EILRPDVQHLLSHLKTDLNSSIYAATHPKLVQHPS 1618
>gi|218191522|gb|EEC73949.1| hypothetical protein OsI_08822 [Oryza sativa Indica Group]
Length = 1565
Score = 2124 bits (5503), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1073/1661 (64%), Positives = 1289/1661 (77%), Gaps = 118/1661 (7%)
Query: 1 MDQNQSQRSSIGAATASSA---SSRAYQFH-----PARAAIIDLFNLYLGRSSRQKQDDS 52
MD QR + A ++SA R Q H PAR++I DLF LYLG +S+Q+ +D
Sbjct: 1 MDGAHGQRQPMSPAISASAVLPQQRQMQLHHHHHHPARSSIADLFTLYLGMNSKQRVEDP 60
Query: 53 IRDPPFFNLRLLIRGLVACCGGILLIVEEFMLRNKTQKRVLALNRELPPRNEQFLIDFEQ 112
R+ NK QKRV A+NR+LPPR+EQF+ DFEQ
Sbjct: 61 TRE----------------------------TSNKLQKRVTAMNRDLPPRDEQFISDFEQ 92
Query: 113 LQSQFPDQDQLRSVTESVLISMVVQCCSHVPRAEFILFALRSLCSIGYINWDTFLPSLLS 172
L QFPDQ+QL++VTESVLIS V+QC SH P++EF+LFA R LC+ G++ WD+ LPSLL+
Sbjct: 93 LHMQFPDQEQLQAVTESVLISFVLQCSSHAPQSEFLLFATRCLCARGHLRWDSLLPSLLN 152
Query: 173 SVSSAEMSAGQG---SQAMPAVSATSLQQSGMLPTSSGIPNSSNYQSSNPASPLPSVHGI 229
VSS E+ GQG + PA S++S + +PN+ ++ SNP SPL +++ I
Sbjct: 153 VVSSVEVPMGQGVSVTTGGPATSSSS---------AIAVPNAPSFHPSNPTSPLSAMNTI 203
Query: 230 GSPAQSAIETSVCAAMSPVKSSDVSCTGQQFTTRVNSSVRDNAISSLRQLCCKIILTGLE 289
GSP QS I+ + A +SP+K ++ S
Sbjct: 204 GSPTQSGIDQPIGANVSPIKGAEFSSLD-------------------------------- 231
Query: 290 FSLKPVTHADIFYHMLNWLVTWDQKQQGIDESDG---KSWRLDKALIEWLHSCLDVIWLL 346
SL+P G+D++D ++ RL++ L EW+H CLDVIW+L
Sbjct: 232 -SLRP---------------------HGVDQADALQLQTLRLERPLHEWMHLCLDVIWIL 269
Query: 347 VDEDRCRVPFYELLRTGLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTF 406
V+ED+CRVPFYEL+R+ LQF+ENIPDDEAL ++I+EIHRRRDM+ MHMQMLDQHLHCPTF
Sbjct: 270 VNEDKCRVPFYELVRSNLQFLENIPDDEALVSIIMEIHRRRDMVCMHMQMLDQHLHCPTF 329
Query: 407 GTHRILSQTTPNISVEAAGNLRYSPITYPSVLGEPLHGEDLATSIQRGSLDWERAMRCIR 466
THR LSQ+ P+I E+ NLRYSPITYPSVLGEPLHGEDLA SI +G LDWERA+RC+R
Sbjct: 330 ATHRFLSQSYPSIVGESVANLRYSPITYPSVLGEPLHGEDLANSIPKGGLDWERALRCLR 389
Query: 467 HAIRATPSPDWWKRVLLVAPCYR-NPAQGPTPGAVFTYDMISEAVIDRIVELLKLTNSEV 525
HA+R TPSPDWW+RVLLVAPCYR +P Q TPGAVF+ DMI EAV DR +ELL+LTNSE
Sbjct: 390 HALRTTPSPDWWRRVLLVAPCYRQHPQQSSTPGAVFSPDMIGEAVADRTIELLRLTNSET 449
Query: 526 NCWHDWLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVEL 585
CW DWL+F+D+FFFL+KSGCIDF+DFVDKL SR+ + D ILR+NHVTWLLAQIIR+E+
Sbjct: 450 QCWQDWLLFADIFFFLMKSGCIDFLDFVDKLASRVTNSDQQILRSNHVTWLLAQIIRIEI 509
Query: 586 VMGALNSDSRKVETTRKILSFHREDRCTDPNN--PQSILLDFISSCQNLRIWSLNTSTRE 643
VM L+SD RKVETTRKI+SFH+ED+ DPNN PQSILLDFISS Q LRIWS NTS RE
Sbjct: 510 VMNTLSSDPRKVETTRKIISFHKEDKSLDPNNISPQSILLDFISSSQTLRIWSFNTSIRE 569
Query: 644 YLNNEQLQKGKQIDEWWRQVSK--GDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNW 701
+LN++QLQKGKQIDEWW+Q++K G+RM+D+ ++D+R++GMFWV+S+TMAQPACE VMNW
Sbjct: 570 HLNSDQLQKGKQIDEWWKQMTKASGERMIDFTSLDERAMGMFWVLSFTMAQPACEAVMNW 629
Query: 702 LSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQVV 761
+S GV +L G NL PNER+ +MRE PL MSLL+G S+NLCLKLA Q+E++IF GQ V
Sbjct: 630 FTSVGVADLIQGPNLQPNERMTMMRETYPLSMSLLSGLSINLCLKLAFQLEETIFLGQNV 689
Query: 762 ASIAMVETYTRLMLLAPHSLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRLLPLYRYQ 821
SIA+VETY RL+L+ PHSLFR F+ L QR+PS+L+K GV+ L+LEI+NYRLLPLYRY
Sbjct: 690 PSIAIVETYVRLLLITPHSLFRPHFTTLTQRSPSILSKSGVSLLLLEILNYRLLPLYRYH 749
Query: 822 GKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTET 881
GK+K LMYD+TKIIS +KVKRG+HR+ RLAENLCMNLILS RDFF +K+E KG TEFTET
Sbjct: 750 GKSKALMYDVTKIISMIKVKRGEHRLFRLAENLCMNLILSLRDFFLVKKELKGPTEFTET 809
Query: 882 LNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIG 941
LNRIT+I+LAI +KTRGIA+ +H+++LQ +LEQIMATSQHTWSEKTLRYFP L+RD L+G
Sbjct: 810 LNRITIISLAITMKTRGIAEVEHIIHLQPLLEQIMATSQHTWSEKTLRYFPPLIRDFLMG 869
Query: 942 RIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQ 1001
R+DKRG IQAWQQAETTVINQC QLLSPSA+PTYV TYLSHSFPQHRQYLCAGAW+LM
Sbjct: 870 RMDKRGQAIQAWQQAETTVINQCNQLLSPSAEPTYVMTYLSHSFPQHRQYLCAGAWMLMN 929
Query: 1002 GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANIS 1061
GH E INSANL RVLRE SPEEVT+NIYTMVDVLLHHI +ELQRGH +QDLL KA N++
Sbjct: 930 GHLE-INSANLARVLRELSPEEVTANIYTMVDVLLHHIQLELQRGHQIQDLLSKAITNLA 988
Query: 1062 FFVLTHELLPLDILLLALIDRDDDPHALRIVITLLDRQELQQRVKLYCMNRGPPEHWLYS 1121
FF+ THELLPLDILLLALIDRDDDP+ALR+VI LL+R ELQQR+K +C +R PEHWL +
Sbjct: 989 FFIWTHELLPLDILLLALIDRDDDPYALRLVINLLERPELQQRIKAFCTSRS-PEHWLKN 1047
Query: 1122 GLFKRVELQKALGNHLSWKERYPTFFDDIAARLLPVIPLIVYRLIENDAMDSADRVLATY 1181
KR+ELQKALGNHLS KERYP FFDDIAARLL VIPLI+YRLIENDA D ADRVLA Y
Sbjct: 1048 QPPKRIELQKALGNHLSGKERYPPFFDDIAARLLLVIPLIIYRLIENDATDIADRVLAVY 1107
Query: 1182 SSFLAYYPLRFSFVRDILAYFYGHLPGKLIVRILNVFDLS-KIPFSESFPQHISSSNPVM 1240
S+FLA++PLRF+FVRDILAYFYGHLP KLIVRILNV +S K PFSESF Q+++SSN +
Sbjct: 1108 STFLAFHPLRFTFVRDILAYFYGHLPSKLIVRILNVLGVSTKTPFSESFAQYLASSNSSI 1167
Query: 1241 CPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDA--SLRAPHNKSPMTSQSGPSNVSEGR 1298
CPP +YFA LL GLVNNVIP L+ SKS + A + R +NK P TS +G + S+G+
Sbjct: 1168 CPPPEYFANLLFGLVNNVIPPLSCKSKSNPSDAAGSTARTTYNK-PYTSSAGGISNSDGQ 1226
Query: 1299 KEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGAS 1358
+ FYQNQDPG+YTQLVLETA IEILSL V ASQIVSSLVQI+ ++Q LIQ+++G +G S
Sbjct: 1227 RAFYQNQDPGSYTQLVLETAAIEILSLCVPASQIVSSLVQIIAHVQAMLIQSNSG-HGMS 1285
Query: 1359 NSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGLL 1418
+GQ S +PTS SGG + +GA+R + SGIN S+FVSRSGY+CQQLS L+IQACGLL
Sbjct: 1286 GGLGQNSGVPTS-SGGGVEPVGANRPNTTASGINASNFVSRSGYSCQQLSVLMIQACGLL 1344
Query: 1419 LAQLPPDFHMQLYMEASRIIKESWWLADGKRSLGELDSAVGYALLDPTWAAQDNTSTAIG 1478
LAQLPP+FH LY EA+RIIK+ WWLAD R + ELDSAVGYALLDPTWA+QDNTSTAIG
Sbjct: 1345 LAQLPPEFHTLLYAEAARIIKDCWWLADSSRPVKELDSAVGYALLDPTWASQDNTSTAIG 1404
Query: 1479 NIVALLHSFFSNLPQEWLEGTHVIIKHLRPITSVAMLRIVFRIMGPLLPRLVNAHTLFNK 1538
NIVALLHSFFSNLP EWLE TH +IKHLRP+ SVAMLRI FRI+GPLLPRL A LF K
Sbjct: 1405 NIVALLHSFFSNLPHEWLESTHTVIKHLRPVNSVAMLRIAFRILGPLLPRLAFARPLFMK 1464
Query: 1539 TLALLLNTMGDVYGKNTLPPAPVEASEIADLIDFLHHVVHYEGQGGPVQASSKPRPEVLV 1598
TLALL N +GDV+GKN+ PVEASEIAD+IDFLHH V YEGQGGPVQ++SKP+ E+L
Sbjct: 1465 TLALLFNVLGDVFGKNSQASPPVEASEIADIIDFLHHAVMYEGQGGPVQSTSKPKLEILT 1524
Query: 1599 LTGRAAESLRPEVQHLLSHLKPDVNSSIYAATHPKMVQNPS 1639
L G+ E LRP+VQHLLSHLK D NSS+YAATHPK+VQNPS
Sbjct: 1525 LCGKVMEILRPDVQHLLSHLKTDPNSSVYAATHPKLVQNPS 1565
>gi|224099539|ref|XP_002311524.1| predicted protein [Populus trichocarpa]
gi|222851344|gb|EEE88891.1| predicted protein [Populus trichocarpa]
Length = 865
Score = 1483 bits (3840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 729/867 (84%), Positives = 789/867 (91%), Gaps = 6/867 (0%)
Query: 675 MDDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMS 734
MDD+S+GMFWVVSYTMAQPA ETV+NWLSSAGV+EL G+N+ NERLMVMREV+PLPMS
Sbjct: 1 MDDKSIGMFWVVSYTMAQPASETVVNWLSSAGVSELLTGTNMQSNERLMVMREVSPLPMS 60
Query: 735 LLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAPHSLFRSLFSHLAQRNP 794
LL+G S+NLCLKL QMEDS+F GQVV SIAMVETY RL+L+APHSLFRS FSHLAQR
Sbjct: 61 LLSGLSMNLCLKLVFQMEDSLFAGQVVPSIAMVETYCRLLLIAPHSLFRSHFSHLAQRYQ 120
Query: 795 SLLAKVGVTPLVLEIVNYRLLPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLAENL 854
S+L+K GVT LVLEIVNYRLLPLYRYQGK+KTLMYD+TKI+S LK KRGDHRV RLAENL
Sbjct: 121 SILSKPGVTLLVLEIVNYRLLPLYRYQGKSKTLMYDVTKIVSTLKGKRGDHRVFRLAENL 180
Query: 855 CMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQ 914
CMNLILSQRDFFS+KREGKG TEFTETLNR+T++ LAIIIKTRGIADADH+LYLQTMLEQ
Sbjct: 181 CMNLILSQRDFFSVKREGKGPTEFTETLNRVTIVTLAIIIKTRGIADADHMLYLQTMLEQ 240
Query: 915 IMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADP 974
I+ATSQHTWS+KTL YFP LLRDALIGRIDKRGL I+AWQQAETTVINQCTQL+S SADP
Sbjct: 241 ILATSQHTWSKKTLSYFPPLLRDALIGRIDKRGLAIKAWQQAETTVINQCTQLISLSADP 300
Query: 975 TYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDV 1034
TYV TY++HSFPQHRQYLCAGAWILMQGHPENINS +L RVLREFSPEEVT+NIYTMVDV
Sbjct: 301 TYVMTYINHSFPQHRQYLCAGAWILMQGHPENINSGHLARVLREFSPEEVTANIYTMVDV 360
Query: 1035 LLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIVIT 1094
LLH+IHV+LQ GH+LQDLL K CAN++FF+ THELLPLDILLLAL DRDDDPHALRIVI+
Sbjct: 361 LLHNIHVDLQHGHTLQDLLLKTCANLAFFIWTHELLPLDILLLALTDRDDDPHALRIVIS 420
Query: 1095 LLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERYPTFFDDIAARL 1154
LLDRQELQ RVKL+CMNR PEHW+ SG FKR+EL KALGNHLSWK+RYPTFFDDIAARL
Sbjct: 421 LLDRQELQSRVKLFCMNRVRPEHWILSGQFKRLELAKALGNHLSWKDRYPTFFDDIAARL 480
Query: 1155 LPVIPLIVYRLIENDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHLPGKLIVRI 1214
LPVIPLIVYRL+ENDA+D ADRVLA YS L Y+PLRF+FVRDILAYFYGHLPGKL+VRI
Sbjct: 481 LPVIPLIVYRLLENDAVDPADRVLAMYSPLLEYHPLRFTFVRDILAYFYGHLPGKLVVRI 540
Query: 1215 LNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDA 1274
LNV DLSKIPFSESFPQHISS NPV+CPP +YFATLLLGLVNNVIP LN NSK GS DA
Sbjct: 541 LNVLDLSKIPFSESFPQHISSPNPVICPPPEYFATLLLGLVNNVIPPLNTNSKYGSVGDA 600
Query: 1275 ---SLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQ 1331
S R PH K+ SQSGP+N SEG+K FYQ QDPGT+TQLVLETAVIE+LSLPV+ASQ
Sbjct: 601 SNNSGRNPHTKTSAASQSGPTNASEGQKAFYQIQDPGTHTQLVLETAVIELLSLPVAASQ 660
Query: 1332 IVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGI 1391
I+ SLVQIVVNIQPTLIQ+SN GA N VGQGSVLPTSPSGGSTDSLG SRSTPSVSGI
Sbjct: 661 IIPSLVQIVVNIQPTLIQSSN---GAPNCVGQGSVLPTSPSGGSTDSLGGSRSTPSVSGI 717
Query: 1392 NTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESWWLADGKRSL 1451
NTS+FV RSGYTCQQLSCLLIQACGLLLAQLPPDFH+QLYMEASRIIKE WWL D KRSL
Sbjct: 718 NTSNFVLRSGYTCQQLSCLLIQACGLLLAQLPPDFHVQLYMEASRIIKECWWLTDSKRSL 777
Query: 1452 GELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLRPITS 1511
GELDSAVGYALLDPTWAAQDNTSTAIGNI+ALLHSFFSNLPQEWLEGTH IIKHLRPITS
Sbjct: 778 GELDSAVGYALLDPTWAAQDNTSTAIGNIIALLHSFFSNLPQEWLEGTHAIIKHLRPITS 837
Query: 1512 VAMLRIVFRIMGPLLPRLVNAHTLFNK 1538
VAMLRI FRIMGPLLPRL N+HTLFNK
Sbjct: 838 VAMLRIAFRIMGPLLPRLANSHTLFNK 864
>gi|413938731|gb|AFW73282.1| hypothetical protein ZEAMMB73_910774 [Zea mays]
Length = 1074
Score = 1443 bits (3736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 722/1110 (65%), Positives = 874/1110 (78%), Gaps = 52/1110 (4%)
Query: 1 MDQNQSQRSSIGAATASSA---SSRAYQ--FHPARAAIIDLFNLYLGRSSRQKQDDSIRD 55
MD + R + A ++S R Q HPAR AI DLF LYLG +S+Q+ +D +R+
Sbjct: 1 MDGGHTTRHPMSPAISASTVLPQQRQMQPHHHPARPAIADLFTLYLGMNSKQRAEDPLRE 60
Query: 56 PPFFNLRLLIRGLVACCGGILLIVEEFMLRNKTQKRVLALNRELPPRNEQFLIDFEQLQS 115
NK QKRV ALNR+LPPR+EQF+ D+EQL+
Sbjct: 61 S----------------------------SNKLQKRVTALNRDLPPRDEQFISDYEQLRM 92
Query: 116 QFPDQDQLRSVTESVLISMVVQCCSHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVS 175
QFPD +QL+++TESVLIS V+QC SH P++EF+LFA R LC+ G++ WD+ LPSLL++VS
Sbjct: 93 QFPDAEQLQAITESVLISFVLQCSSHAPQSEFLLFATRCLCARGHLRWDSLLPSLLNTVS 152
Query: 176 SAEMSAGQGSQAMPAVSATSLQQSGMLPTSSGI--PNSSNYQSSNPASPLPSVHGIGSPA 233
S E P V S+ G + SS I PN+ N+ SNPASPL ++ IGSP
Sbjct: 153 SIEA---------PMVQGVSVTGGGSVTPSSAITMPNAPNFHQSNPASPLSVMNTIGSPT 203
Query: 234 QSAIETSVCAAMSPVKSSDVSCTGQQFTT-RVNSSVRDNAISSLRQLCCKIILTGLEFSL 292
QS I+ V A +SP+K+++ S + Q T R + S R S L L C+IIL GLEF+L
Sbjct: 204 QSGIDQPVGANVSPIKAAEFSSSAQLGTAARGDQSRRGAEASYLHHLSCRIILAGLEFNL 263
Query: 293 KPVTHADIFYHMLNWLVTWDQKQQGIDESDG-KSWRLDKALIEWLHSCLDVIWLLVDEDR 351
KP THA IF HM+NWLV WDQ+ QG+DE+D ++ RL+K L EW+H CLDVIW+LV+ED+
Sbjct: 264 KPATHAVIFQHMVNWLVNWDQRPQGMDETDTMQTCRLEKPLHEWMHLCLDVIWILVNEDK 323
Query: 352 CRVPFYELLRTGLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRI 411
CR+PFYEL+R LQF+ENIPDDEAL ++I+EIHRRRDM+ MHMQMLDQHLHCPTFGTHR
Sbjct: 324 CRIPFYELVRCNLQFLENIPDDEALVSIIMEIHRRRDMVCMHMQMLDQHLHCPTFGTHRF 383
Query: 412 LSQTTPNISVEAAGNLRYSPITYPSVLGEPLHGEDLATSIQRGSLDWERAMRCIRHAIRA 471
LSQ+ P+I+ E+ NLRYSPITYPSVLGEPLHGEDLA SI +G LDWERA+RC+RHA+R
Sbjct: 384 LSQSYPSIAGESVTNLRYSPITYPSVLGEPLHGEDLANSIPKGGLDWERALRCLRHALRT 443
Query: 472 TPSPDWWKRVLLVAPCYRNPAQ-GPTPGAVFTYDMISEAVIDRIVELLKLTNSEVNCWHD 530
TPSPDWW+RVLLVAPCYR+ +Q TPGAVF+ DMI EAV DR +ELLKLTNSE CW D
Sbjct: 444 TPSPDWWRRVLLVAPCYRSQSQQSSTPGAVFSPDMIGEAVADRTIELLKLTNSETQCWQD 503
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
WL+F+D+FFFL+KSGCIDF+DFVDKL SR+ + D ILR+NHVTWLLAQIIR+E+VM L
Sbjct: 504 WLLFADIFFFLMKSGCIDFLDFVDKLASRVTNSDQQILRSNHVTWLLAQIIRIEIVMNTL 563
Query: 591 NSDSRKVETTRKILSFHREDRCTDPNN--PQSILLDFISSCQNLRIWSLNTSTREYLNNE 648
+SD RKV+TTRKI+SFH+ED+ D NN PQSILLDFISS Q LRIWS NTS RE+LN++
Sbjct: 564 SSDPRKVDTTRKIISFHKEDKSLDANNIGPQSILLDFISSSQTLRIWSFNTSIREHLNSD 623
Query: 649 QLQKGKQIDEWWRQVSK--GDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAG 706
QLQKGKQIDEWW+Q+ K G+RM+D+ N+D+R+ GMFWV+S+TMAQPACE VMNW +SAG
Sbjct: 624 QLQKGKQIDEWWKQMMKASGERMIDFTNLDERATGMFWVLSFTMAQPACEAVMNWFTSAG 683
Query: 707 VTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASIAM 766
+ +L G N+ P+ER+M+MRE PL MSLL+G S+NLCLKLA Q+E++IF GQ V SIAM
Sbjct: 684 MADLIQGPNMQPSERIMMMRETYPLSMSLLSGLSINLCLKLAYQLEETIFLGQAVPSIAM 743
Query: 767 VETYTRLMLLAPHSLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRLLPLYRYQGKTKT 826
VETY RL+L+APHSLFR F+ L QR+PS+L+K GV+ L+LEI+NYRLLPLYRY GK+K
Sbjct: 744 VETYVRLLLIAPHSLFRPHFTALTQRSPSILSKSGVSLLLLEILNYRLLPLYRYHGKSKA 803
Query: 827 LMYDITKIISALKVKRGDHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRIT 886
LMYD+TKIIS +K KRG+HR+ RLAENLCMNLILS +DFF +K+E KG TEFTETLNRIT
Sbjct: 804 LMYDVTKIISMIKGKRGEHRLFRLAENLCMNLILSLKDFFFVKKELKGPTEFTETLNRIT 863
Query: 887 VIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKR 946
+I+LAI IKTRGIA+ +H++YLQ +LEQIMATSQHTWSEKTLRYFP L+RD L+GR+DKR
Sbjct: 864 IISLAITIKTRGIAEVEHMIYLQPLLEQIMATSQHTWSEKTLRYFPPLIRDFLMGRVDKR 923
Query: 947 GLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPEN 1006
GL IQAWQQAETTVINQC QLLSPSA+P YV TYLSHSFPQHRQYLCAGAW+LM GH E
Sbjct: 924 GLAIQAWQQAETTVINQCNQLLSPSAEPNYVMTYLSHSFPQHRQYLCAGAWMLMNGHLE- 982
Query: 1007 INSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLT 1066
INSANL RVLREFSPEEVT+NIYT+VDVLLHHI E+QRGH QDLL KA N+SFF+ T
Sbjct: 983 INSANLARVLREFSPEEVTANIYTVVDVLLHHIQCEVQRGHLAQDLLSKAITNLSFFIWT 1042
Query: 1067 HELLPLDILLLALIDRDDDPHALRIVITLL 1096
HELLPLDILLLALIDRDDDP+ALR+V L
Sbjct: 1043 HELLPLDILLLALIDRDDDPYALRLVTALF 1072
>gi|413938730|gb|AFW73281.1| hypothetical protein ZEAMMB73_910774 [Zea mays]
Length = 1104
Score = 1437 bits (3720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 724/1112 (65%), Positives = 876/1112 (78%), Gaps = 26/1112 (2%)
Query: 1 MDQNQSQRSSIGAATASSA---SSRAYQ--FHPARAAIIDLFNLYLGRSSRQKQDDSIRD 55
MD + R + A ++S R Q HPAR AI DLF LYLG + I
Sbjct: 1 MDGGHTTRHPMSPAISASTVLPQQRQMQPHHHPARPAIADLFTLYLGVRASLAPKFLISS 60
Query: 56 PPFFNLRLLIRGLVACCGGILLIVEEFMLR--NKTQKRVLALNRELPPRNEQFLIDFEQL 113
+L +L G+V E+ + NK QKRV ALNR+LPPR+EQF+ D+EQL
Sbjct: 61 RVGVSLLVLTLGVVGLQMNSKQRAEDPLRESSNKLQKRVTALNRDLPPRDEQFISDYEQL 120
Query: 114 QSQFPDQDQLRSVTESVLISMVVQCCSHVPRAEFILFALRSLCSIGYINWDTFLPSLLSS 173
+ QFPD +QL+++TESVLIS V+QC SH P++EF+LFA R LC+ G++ WD+ LPSLL++
Sbjct: 121 RMQFPDAEQLQAITESVLISFVLQCSSHAPQSEFLLFATRCLCARGHLRWDSLLPSLLNT 180
Query: 174 VSSAEMSAGQGSQAMPAVSATSLQQSGMLPTSSGI--PNSSNYQSSNPASPLPSVHGIGS 231
VSS E P V S+ G + SS I PN+ N+ SNPASPL ++ IGS
Sbjct: 181 VSSIEA---------PMVQGVSVTGGGSVTPSSAITMPNAPNFHQSNPASPLSVMNTIGS 231
Query: 232 PAQSAIETSVCAAMSPVKSSDVSCTGQQFTT-RVNSSVRDNAISSLRQLCCKIILTGLEF 290
P QS I+ V A +SP+K+++ S + Q T R + S R S L L C+IIL GLEF
Sbjct: 232 PTQSGIDQPVGANVSPIKAAEFSSSAQLGTAARGDQSRRGAEASYLHHLSCRIILAGLEF 291
Query: 291 SLKPVTHADIFYHMLNWLVTWDQKQQGIDESDG-KSWRLDKALIEWLHSCLDVIWLLVDE 349
+LKP THA IF HM+NWLV WDQ+ QG+DE+D ++ RL+K L EW+H CLDVIW+LV+E
Sbjct: 292 NLKPATHAVIFQHMVNWLVNWDQRPQGMDETDTMQTCRLEKPLHEWMHLCLDVIWILVNE 351
Query: 350 DRCRVPFYELLRTGLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTH 409
D+CR+PFYEL+R LQF+ENIPDDEAL ++I+EIHRRRDM+ MHMQMLDQHLHCPTFGTH
Sbjct: 352 DKCRIPFYELVRCNLQFLENIPDDEALVSIIMEIHRRRDMVCMHMQMLDQHLHCPTFGTH 411
Query: 410 RILSQTTPNISVEAAGNLRYSPITYPSVLGEPLHGEDLATSIQRGSLDWERAMRCIRHAI 469
R LSQ+ P+I+ E+ NLRYSPITYPSVLGEPLHGEDLA SI +G LDWERA+RC+RHA+
Sbjct: 412 RFLSQSYPSIAGESVTNLRYSPITYPSVLGEPLHGEDLANSIPKGGLDWERALRCLRHAL 471
Query: 470 RATPSPDWWKRVLLVAPCYRNPAQ-GPTPGAVFTYDMISEAVIDRIVELLKLTNSEVNCW 528
R TPSPDWW+RVLLVAPCYR+ +Q TPGAVF+ DMI EAV DR +ELLKLTNSE CW
Sbjct: 472 RTTPSPDWWRRVLLVAPCYRSQSQQSSTPGAVFSPDMIGEAVADRTIELLKLTNSETQCW 531
Query: 529 HDWLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMG 588
DWL+F+D+FFFL+KSGCIDF+DFVDKL SR+ + D ILR+NHVTWLLAQIIR+E+VM
Sbjct: 532 QDWLLFADIFFFLMKSGCIDFLDFVDKLASRVTNSDQQILRSNHVTWLLAQIIRIEIVMN 591
Query: 589 ALNSDSRKVETTRKILSFHREDRCTDPNN--PQSILLDFISSCQNLRIWSLNTSTREYLN 646
L+SD RKV+TTRKI+SFH+ED+ D NN PQSILLDFISS Q LRIWS NTS RE+LN
Sbjct: 592 TLSSDPRKVDTTRKIISFHKEDKSLDANNIGPQSILLDFISSSQTLRIWSFNTSIREHLN 651
Query: 647 NEQLQKGKQIDEWWRQVSK--GDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSS 704
++QLQKGKQIDEWW+Q+ K G+RM+D+ N+D+R+ GMFWV+S+TMAQPACE VMNW +S
Sbjct: 652 SDQLQKGKQIDEWWKQMMKASGERMIDFTNLDERATGMFWVLSFTMAQPACEAVMNWFTS 711
Query: 705 AGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASI 764
AG+ +L G N+ P+ER+M+MRE PL MSLL+G S+NLCLKLA Q+E++IF GQ V SI
Sbjct: 712 AGMADLIQGPNMQPSERIMMMRETYPLSMSLLSGLSINLCLKLAYQLEETIFLGQAVPSI 771
Query: 765 AMVETYTRLMLLAPHSLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRLLPLYRYQGKT 824
AMVETY RL+L+APHSLFR F+ L QR+PS+L+K GV+ L+LEI+NYRLLPLYRY GK+
Sbjct: 772 AMVETYVRLLLIAPHSLFRPHFTALTQRSPSILSKSGVSLLLLEILNYRLLPLYRYHGKS 831
Query: 825 KTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNR 884
K LMYD+TKIIS +K KRG+HR+ RLAENLCMNLILS +DFF +K+E KG TEFTETLNR
Sbjct: 832 KALMYDVTKIISMIKGKRGEHRLFRLAENLCMNLILSLKDFFFVKKELKGPTEFTETLNR 891
Query: 885 ITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRID 944
IT+I+LAI IKTRGIA+ +H++YLQ +LEQIMATSQHTWSEKTLRYFP L+RD L+GR+D
Sbjct: 892 ITIISLAITIKTRGIAEVEHMIYLQPLLEQIMATSQHTWSEKTLRYFPPLIRDFLMGRVD 951
Query: 945 KRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHP 1004
KRGL IQAWQQAETTVINQC QLLSPSA+P YV TYLSHSFPQHRQYLCAGAW+LM GH
Sbjct: 952 KRGLAIQAWQQAETTVINQCNQLLSPSAEPNYVMTYLSHSFPQHRQYLCAGAWMLMNGHL 1011
Query: 1005 ENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFV 1064
E INSANL RVLREFSPEEVT+NIYT+VDVLLHHI E+QRGH QDLL KA N+SFF+
Sbjct: 1012 E-INSANLARVLREFSPEEVTANIYTVVDVLLHHIQCEVQRGHLAQDLLSKAITNLSFFI 1070
Query: 1065 LTHELLPLDILLLALIDRDDDPHALRIVITLL 1096
THELLPLDILLLALIDRDDDP+ALR+V L
Sbjct: 1071 WTHELLPLDILLLALIDRDDDPYALRLVTALF 1102
>gi|168019772|ref|XP_001762418.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686496|gb|EDQ72885.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1503
Score = 1379 bits (3570), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 766/1589 (48%), Positives = 1016/1589 (63%), Gaps = 133/1589 (8%)
Query: 89 QKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCCSHVPRAEFI 148
+KRV A++R P+ +QF DF LQSQF D F+
Sbjct: 1 RKRVAAVSRPQAPKEDQFSSDFLMLQSQFTVSD-------------------------FL 35
Query: 149 LFALRSLCSIGYINWDTFLPSLLSSVSSAE-MSAGQGSQAMPAVSATSLQQSG----MLP 203
L L+ L +G++ WD+FL LL + AE + GS V T Q +G M+
Sbjct: 36 LSCLQILVKMGFVRWDSFLHILLRAAEKAENIGQATGSHQGMNVGVTGPQLTGPLAMMMQ 95
Query: 204 TSSGIPNSSNYQSSNPASPL-PSVHG--IGSPAQSAIETSVCAAMSPVKSSDVSCTGQQF 260
++ P S+ S ++ L S HG SPA S +E S V S TG
Sbjct: 96 GTTATPASTPASPSPSSNLLTSSAHGNVAASPAHSGVE------YSSVNPSSNGGTGASG 149
Query: 261 TTRVNSSVRDNAISSLRQLCCKIILTGLEFSLKPVTHADIFYHMLNWLVTWDQKQQGI-D 319
T+ +NS LR L C+++L L+ LKPVT DI H+ W+ TWD + G D
Sbjct: 150 TSIINS---------LRPLVCRVMLAALDNELKPVTCLDILLHVAQWIQTWDAEVDGKED 200
Query: 320 ESDGK--SWRLDKALIEWLHSCLDVIWLLVDEDRCRVPFYELLRTGLQF-IENIPDDEAL 376
ES + SW+L + W+HSC++VIW L+DE++CRVPFY LL Q +E PDDEAL
Sbjct: 201 ESKSRLNSWKLKSKM--WIHSCVEVIWALIDENKCRVPFYALLHDKTQLQVERWPDDEAL 258
Query: 377 FTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPS 436
F L LE+HRRRD +A+HM LDQHLHCPTF T LR S +TYP
Sbjct: 259 FALFLEVHRRRDKIALHMLPLDQHLHCPTFAT------------------LRVSSLTYPG 300
Query: 437 VLGEPLHGEDLATSIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQ--G 494
+GE LHGED+AT+I +GS++WE+AMRC+R A+RA S DWWK+VL++AP ++ Q G
Sbjct: 301 TMGELLHGEDVATAIPKGSVEWEKAMRCLRQALRACVSTDWWKKVLVLAPRFKKAPQSMG 360
Query: 495 PTPGAVF--------TYDMISEAVIDRIVELLKL--TNSEVNC-WHDWLIFSDVFFFLVK 543
P G++F + DM +AV++RI+EL++ T C W +WL+F+D+F+F +
Sbjct: 361 PRTGSLFVGQPSLEFSADMTCDAVVERIMELMQPLPTGYAFTCRWQEWLMFADLFYFFMS 420
Query: 544 SGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRKI 603
+ C+DF++ +DKL R +G ++ +NHVTWLLAQ+ R+E+V AL+S+ +VET RKI
Sbjct: 421 TSCLDFLELIDKLSLRFANGT--VMASNHVTWLLAQVFRLEIVTSALSSEILQVETARKI 478
Query: 604 LSFHREDRC---TDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN----EQLQKGKQI 656
LSF+ +R T Q++LLDF+ S Q LR+WS+N + E L+ E +QKGK I
Sbjct: 479 LSFNMAERSVEQTSNTTAQALLLDFVGSSQTLRLWSINRNMMENLHGNRVQEHMQKGKVI 538
Query: 657 DEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTELFPGSNL 716
DEWW+QV KG+ ++DY +D++++GM WV+S TM QP E +M W S+G++E+ +
Sbjct: 539 DEWWKQVMKGEWVLDYAQLDEKAMGMVWVLSNTMTQPISEALMIWFRSSGLSEI-----I 593
Query: 717 PPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLL 776
ERL V+ E PLPM+LL+G SL+LCL+L Q+E+ IF GQ + SIAMVETY RL+L
Sbjct: 594 LQGERLSVIHETRPLPMTLLSGLSLHLCLRLLTQIEELIFAGQFIPSIAMVETYVRLLLA 653
Query: 777 APHSLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRLLPLYRYQGKTKTLMYDITKIIS 836
AP +LFR + +A R S + K V+ L+LE+ NYRLLPLYR+ K K L++DI KII
Sbjct: 654 APQNLFRHHLNGMAHRFQSGMTKPAVSLLLLELFNYRLLPLYRFHNKLKQLIFDIAKIII 713
Query: 837 ALKVKRGDHRVLRLAENLCMNLILSQRDFFSLKREGKG-STEFTETLNRITVIALAIIIK 895
+KVKRG+HR+ RLAENL +NLIL+ +D +K+E KG +TEFTETLNRI V+ LA +K
Sbjct: 714 TVKVKRGEHRLFRLAENLGINLILNMKDVLLVKKELKGATTEFTETLNRIMVLNLAFTMK 773
Query: 896 TRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQ 955
TRGIAD + ++ L+ LEQI+A+ HTWSEKT+R+FP LLR+AL RID R IQ+WQQ
Sbjct: 774 TRGIADFEQMIILKPALEQILASINHTWSEKTMRHFPPLLREALANRIDTRAHVIQSWQQ 833
Query: 956 AETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQ-GHPENINSANLLR 1014
AE TV++ C QLLS ++DP+YV Y+ HS P HRQ+LCAGAW+ M P++I+ ANL R
Sbjct: 834 AEHTVMSHCRQLLSANSDPSYVSQYIQHSLPAHRQFLCAGAWMSMDFERPDSISIANLGR 893
Query: 1015 VLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDI 1074
L+EFSPEEVT+N+Y MVDVLLHHIHV+LQ GHSLQ+LL A ++ F+ ELLP DI
Sbjct: 894 TLKEFSPEEVTTNVYMMVDVLLHHIHVQLQHGHSLQNLLLATSAGLAHFMWNQELLPFDI 953
Query: 1075 LLLALIDRDDDPHALRIVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALG 1134
+LLAL DRDDD HALR+V LLDR E QQRV+ Y ++RG EHW+ G F+R E +ALG
Sbjct: 954 VLLALTDRDDDAHALRLVGLLLDRPEFQQRVQTYYVHRGQTEHWMQLGPFQRPEYPQALG 1013
Query: 1135 NHLSWKERYPTFFDDIAARLLPVIPLIVYRLIENDAMDSADRVLATYSSFLAYYPLRFSF 1194
+HL+ K+R+P FFDD+ R LPVIPLIVYRLIENDA ++A+R+L Y+ + Y+P RFSF
Sbjct: 1014 SHLAGKDRFPLFFDDMCLRALPVIPLIVYRLIENDATETAERLLHVYTPLIFYHPTRFSF 1073
Query: 1195 VRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLGL 1254
VRD LAYFYGHLP KL+ R+L DL KIPFSE+F Q I + N P +YF LL+GL
Sbjct: 1074 VRDTLAYFYGHLPTKLVRRLLGSLDLPKIPFSETFLQQIKAFNTGSSPSYEYFHNLLVGL 1133
Query: 1255 VNNVIPALNYNSKSGSTMDASL---RAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYT 1311
VNNVIP L+ + +T L R N++ + S +N +E K FY +QDPG+Y
Sbjct: 1134 VNNVIPPLHGKPGTSATGGDGLLSSRFVLNRN-QAAASTANNTTEVNKAFYLHQDPGSYN 1192
Query: 1312 QLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSP 1371
QL+LETAV+E+LSLP +QIV+ L+ I V + + Q GP P SP
Sbjct: 1193 QLLLETAVVELLSLPPPPNQIVAMLIHIAVKLPTSFPQ--GGPPKT----------PQSP 1240
Query: 1372 SGGSTDSLGASRSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLY 1431
S G G + S S SG+N SS +T S L+IQACGLLLAQLP FH +Y
Sbjct: 1241 SSG-----GEALSGQSSSGLNNSS----PQFTH---SPLMIQACGLLLAQLPVAFHGAIY 1288
Query: 1432 MEASRII-KESWWLADGKRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSN 1490
E +RII K+ WWL D + +LD+ GY+ DP+W A+D+T+T I N V LLH+ SN
Sbjct: 1289 SETARIIKKDCWWLTDPSKQSRDLDAIFGYSTWDPSWGARDDTATVIANTVTLLHTLQSN 1348
Query: 1491 LPQEWLEGTHVIIKHLRPITSVAMLRIVFRIMGPLLPRLVNAHTLFNKTLALLLNTMGDV 1550
LP EWLEG H +I RP SV LR+ +RIMG L + + LF KTLALL + DV
Sbjct: 1349 LPFEWLEGMHSVITQQRPFVSVVHLRLAYRIMG-PLLPRLLSRPLFAKTLALLFTILADV 1407
Query: 1551 YGKNTLPPAPVEASEIADLIDFLHHVVHYEGQGGPVQASSKPRPEVLVLTGRAAESLRPE 1610
+G+N+ P+ EA++I DL+DFLHH V E Q QA +PRPE LVL +A E LRP+
Sbjct: 1408 FGRNSQVPSATEATDIVDLVDFLHHAVMMEVQATG-QAGGRPRPETLVLCSKAVERLRPD 1466
Query: 1611 VQHLLSHLKPDVNSSIYAATHPKMVQNPS 1639
VQ L HL PD SSIYAATHPK+ Q P
Sbjct: 1467 VQLLFRHLSPDGASSIYAATHPKL-QRPG 1494
>gi|302756403|ref|XP_002961625.1| hypothetical protein SELMODRAFT_76173 [Selaginella moellendorffii]
gi|300170284|gb|EFJ36885.1| hypothetical protein SELMODRAFT_76173 [Selaginella moellendorffii]
Length = 1482
Score = 1361 bits (3523), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 735/1595 (46%), Positives = 1010/1595 (63%), Gaps = 164/1595 (10%)
Query: 87 KTQKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCCSHVPRAE 146
+T++R A + PP NEQF D+ LQ+QF D +QL+++TES++ + +QC SH P+A+
Sbjct: 1 RTKQRKKASTKPHPP-NEQFQSDYLLLQNQFMDHNQLQAITESLVAMLFIQCGSHAPQAD 59
Query: 147 FILFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQGSQAMPAVSATSLQQSGMLPTSS 206
F+LFALR+L G + D FL + +V+ E + +QA QS L ++S
Sbjct: 60 FLLFALRTLARAGLLRSDMFLLAFFRAVAMVESNPVAVTQA----------QSSPLVSTS 109
Query: 207 GIPNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSDVSCTGQQFTTRVNS 266
G P+ T++ S K + V
Sbjct: 110 GEPS----------------------------TNILVTPSSAKRASV------------- 128
Query: 267 SVRDNAISSLRQLCCKIILTGLEFSLKPVTHADIFYHMLNWLVTWDQKQQGIDESDGKSW 326
LR L C ++ LE L+PV D+ Y + W+ D + G
Sbjct: 129 --------WLRPLVCNVMGAALEAELRPVASFDMLYLTVQWIN---------DVASGSEG 171
Query: 327 RLDKALIEWLHSCLDVIWLLVDEDRCRVPFYELL--RTGLQFIENIPDDEALFTLILEIH 384
L + WL +CL+V+ +L+DE +CRVPFY LL +T LQ + P++EAL L L++H
Sbjct: 172 SLKD--VTWLDNCLEVLRMLIDERKCRVPFYALLHDQTLLQ-ADYWPENEALLGLFLDLH 228
Query: 385 RRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPSVLGEPLHG 444
RRRD +A+HM M D HL CPTF T LR + +TY +GE L+G
Sbjct: 229 RRRDRIALHMLMFDHHLQCPTFST------------------LRSTALTYAGAMGEALYG 270
Query: 445 EDLATSIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCY------RNPAQGPT-- 496
E++A S+QR SLD+E+A+RC++H +R PS D W+RVLL AP + P GP
Sbjct: 271 EEVAASVQRDSLDYEKALRCLKHGLRTNPSADIWRRVLLCAPRHRQQQQPVPPRPGPNTS 330
Query: 497 ---PGAVFTYDMISEAVIDRIVELLK-------------------LTNSEVNCWHDWLIF 534
PG VF +M EAV++RI++L++ + +E W +WL F
Sbjct: 331 WTQPGLVFNSEMTCEAVVERIMDLMQPISTGRGFYHIFSFPAFSATSTTESGRWQEWLNF 390
Query: 535 SDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL--NS 592
+D+F++ ++ G +DF++F++KL G+ I R+NHVTWLLAQ+ R+E V AL +
Sbjct: 391 ADLFYYFMRRGYLDFLEFIEKLAGAFASGEQSIQRSNHVTWLLAQVFRLETVTQALSEDE 450
Query: 593 DSRKVETTRKILSFHREDRCTDPNN---PQSILLDFISSCQNLRIWSLNTSTREYLNN-- 647
DSRKVET +KILSFH DR D +N PQ+ LLD++ S Q LR+W+LN + E+L
Sbjct: 451 DSRKVETAQKILSFHMADRSVDHSNAVSPQAKLLDYVGSSQILRLWALNRTVMEHLVGNR 510
Query: 648 --EQLQKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
E +QKGK IDEWW++V KG+R +DY N+DD S+GM WV+S+TM QP + VMNW+ S
Sbjct: 511 MPEHIQKGKTIDEWWKKVLKGERFLDYANLDDNSMGMVWVLSHTMTQPVADAVMNWMRSN 570
Query: 706 GVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASIA 765
GV E+ G NER+ V+ E +PLP+++L+G SL+LC++L Q+E+ IF GQ+V SIA
Sbjct: 571 GVGEVLVG-----NERIAVVHETSPLPIAMLSGLSLHLCMRLIQQIEEQIFAGQMVPSIA 625
Query: 766 MVETYTRLMLLAPHSLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRLLPLYRYQGKTK 825
M+ETY RL+L+AP +LF+ + + Q+ S AK G++ ++LE++NYRL+PLYR+ GK K
Sbjct: 626 MLETYVRLLLVAPQTLFQHHLNGMMQKYQSGAAKAGISLILLELLNYRLMPLYRFHGKLK 685
Query: 826 TLMYDITKIISALKVKRGDHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRI 885
L++D+ KII +K KRGDHR+ RLAENL +NL+LS ++ +K+E +TEFTETLNRI
Sbjct: 686 QLVFDMAKIIIPMKAKRGDHRLFRLAENLGINLVLSMKEVLLIKKEKGATTEFTETLNRI 745
Query: 886 TVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDK 945
V++LAI IKTRGIA+ + +L LQT LEQI+A S+HTWSEKT+R+FP LR+ L R D
Sbjct: 746 MVVSLAITIKTRGIAEFEQLLVLQTALEQILANSKHTWSEKTMRHFPQTLREVLALRSDG 805
Query: 946 RGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPE 1005
R LT+Q WQQ ETTV++QC QLL + DP + ++++HSFP HR +LCA AW+LM PE
Sbjct: 806 RLLTLQTWQQVETTVLHQCQQLL--AGDPAFAMSFVNHSFPPHRPFLCAAAWVLMDCRPE 863
Query: 1006 NINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVL 1065
N N NL + L+E SPE+VTSNIYT+VD+LLHH+H++LQ GHS QDLL +A A +++ V
Sbjct: 864 NFNCGNLGKALKELSPEDVTSNIYTLVDILLHHMHLQLQHGHSQQDLLLRASATLTYLVW 923
Query: 1066 THELLPLDILLLALIDRDDDPHALRIVITLLDRQELQQ-RVKLYCMNRGPPEHWLYSGLF 1124
+ E+LP DILLLAL+DRDDD HALR+V LLDR+E QQ RV+ YC G EHWL+ G F
Sbjct: 924 SQEILPFDILLLALLDRDDDIHALRLVSLLLDRKEFQQLRVQNYCRQHGQQEHWLHPGPF 983
Query: 1125 KRVELQKALGNHLSWKERYPTFFDDIAARLLPVIPLIVYRLIENDAMDSADRVLATYSSF 1184
+RVE +ALGNHL+ KERYP FFDD+A R LPVI L+VYRLIENDA D+A+ VL YS
Sbjct: 984 QRVEPPQALGNHLAGKERYPVFFDDMALRALPVIHLVVYRLIENDATDTAEHVLTAYSPL 1043
Query: 1185 LAYYPLRFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPL 1244
L Y+P RF+FVRD LAYFYGHLP KLI+R+L+ D++K+P SE+F + +++ PP
Sbjct: 1044 LRYHPTRFTFVRDTLAYFYGHLPNKLILRLLSSLDIAKMPVSEAFIRILNTGT----PPY 1099
Query: 1245 DYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQN 1304
DY+ T+LL LVNNVIP+ ++ S S + +P S + +N ++ K FY +
Sbjct: 1100 DYYVTMLLNLVNNVIPSFTNKPRTSSPTMESFSTTRSTTPGKSPASSTNSTDNHKAFYHH 1159
Query: 1305 QDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQG 1364
QDPG+Y QLVLET VIE+LSLP +Q V+ LVQI V + PT + + ++ +
Sbjct: 1160 QDPGSYCQLVLETCVIELLSLPTPPAQAVAMLVQIAVRV-PT-PPSQAYASASQSAAPRS 1217
Query: 1365 SVLPTSPSGGSTDSLGASRSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPP 1424
+LPTSP T ST +G S F+S +IQACGLLLAQLP
Sbjct: 1218 PLLPTSPPSACTAESSTPSSTSVSTGQTISPFISPQ----------VIQACGLLLAQLPR 1267
Query: 1425 DFHMQLYMEASRIIKESWWLADGKRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALL 1484
FH Y E +RI+K+ WWL D K+S E+D+A GY++ DP+WA QD TS+ IGN AL
Sbjct: 1268 QFHDVFYKEVARILKDCWWLKDPKKSPKEMDAAFGYSVWDPSWAVQDGTSSVIGNAAALF 1327
Query: 1485 HSFFSNLPQEWLEGTHVIIKHLRPITSVAMLRIVFRIMGPLLPRLVNAHTLFNKTLALLL 1544
H+F +N+ EWLE TH ++ RP+T+VA LR+ FR++GPL+PR V + LF KTLALL
Sbjct: 1328 HAFTANISFEWLENTHDVVNLQRPMTTVAQLRLAFRMLGPLVPRFVISRPLFAKTLALLF 1387
Query: 1545 NTMGDVYGKNTLPPAPV-EASEIADLIDFLHHVVHYEGQGGPVQASSKPRPEVLVLTGRA 1603
+ +V+G+N A V + +EI DL+DF+HHVV E Q QA KPRP+ L L +A
Sbjct: 1388 TMLAEVFGRN----AQVHDVTEITDLVDFMHHVVMLEAQ----QAGGKPRPDTLGLCNKA 1439
Query: 1604 AESLRPEVQHLLSHLKPDVNSSIYAATHPKMVQNP 1638
E L P+VQHL HL D SIYAATHPK+ Q P
Sbjct: 1440 VERLHPDVQHLFQHLTVDPQRSIYAATHPKIAQRP 1474
>gi|302762549|ref|XP_002964696.1| hypothetical protein SELMODRAFT_82733 [Selaginella moellendorffii]
gi|300166929|gb|EFJ33534.1| hypothetical protein SELMODRAFT_82733 [Selaginella moellendorffii]
Length = 1482
Score = 1348 bits (3489), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 728/1595 (45%), Positives = 1005/1595 (63%), Gaps = 164/1595 (10%)
Query: 87 KTQKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCCSHVPRAE 146
+T++R A + PP NEQF D+ LQ+QF D +QL+++TES++ + +QC SH P+A+
Sbjct: 1 RTKQRKKASTKPHPP-NEQFQSDYLLLQNQFMDHNQLQAITESLVAMLFIQCGSHAPQAD 59
Query: 147 FILFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQGSQAMPAVSATSLQQSGMLPTSS 206
F+LFALR+L G + D FL + +V+ E + V+ T Q S ++ TS
Sbjct: 60 FLLFALRTLARAGLLRSDMFLLAFFRAVAMVESN---------PVAVTQAQSSPLVSTS- 109
Query: 207 GIPNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSDVSCTGQQFTTRVNS 266
G P+ + + T A + V + C
Sbjct: 110 -----------------------GEPSTNILVTPSSAKRASVWLRPLVC----------- 135
Query: 267 SVRDNAISSLRQLCCKIILTGLEFSLKPVTHADIFYHMLNWLVTWDQKQQGIDESDGKSW 326
++ LE L+PV D+ Y + W+ D + G
Sbjct: 136 ---------------NVMGAALEAELRPVASFDMLYLTVQWIN---------DVASGSEG 171
Query: 327 RLDKALIEWLHSCLDVIWLLVDEDRCRVPFYELL--RTGLQFIENIPDDEALFTLILEIH 384
L + WL +CL+V+ +L+DE +CRVPFY LL +T LQ + P++EAL L L++H
Sbjct: 172 SLKD--VTWLDNCLEVLRMLIDERKCRVPFYALLHDQTLLQ-ADYWPENEALLGLFLDLH 228
Query: 385 RRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPSVLGEPLHG 444
RRRD +A+HM M D HL CPTF T LR + +TY +GE L+G
Sbjct: 229 RRRDRIALHMLMFDHHLQCPTFST------------------LRSTALTYAGAMGEALYG 270
Query: 445 EDLATSIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCY------RNPAQGPT-- 496
E++A S+QR SLD+E+A+RC++H +R PS D W+RVL+ AP + P GP
Sbjct: 271 EEVAASVQRDSLDYEKALRCLKHGLRTNPSADIWRRVLVCAPRHRQQQQPVPPRPGPNTS 330
Query: 497 ---PGAVFTYDMISEAVIDRIVELLK-------------------LTNSEVNCWHDWLIF 534
PG VF +M EAV++RI++L++ + +E W +WL F
Sbjct: 331 WTQPGLVFNSEMTCEAVVERIMDLMQPISTGRGFYHIFSFPAFSATSTTESGRWQEWLNF 390
Query: 535 SDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL--NS 592
+D+F++ ++ G +DF++F++KL G+ I R+NHVTWLLAQ+ R+E V AL +
Sbjct: 391 ADLFYYFMRRGYLDFLEFIEKLAGAFASGEQSIQRSNHVTWLLAQVFRLETVTQALSEDE 450
Query: 593 DSRKVETTRKILSFHREDRCTDPNN---PQSILLDFISSCQNLRIWSLNTSTREYLNN-- 647
DSRKVET +KILSFH DR D +N PQ+ LLD++ S Q LR+W+LN + E L
Sbjct: 451 DSRKVETAQKILSFHMADRSVDHSNAVSPQAKLLDYVGSSQILRLWALNRTVMEQLVGNR 510
Query: 648 --EQLQKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
E +QKGK IDEWW++V KG+R +DY N+DD S+GM WV+S+TM QP + VMNW+ S
Sbjct: 511 MPEHIQKGKTIDEWWKKVLKGERFLDYANLDDNSMGMVWVLSHTMTQPVADAVMNWMRSN 570
Query: 706 GVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASIA 765
GV E+ G NER+ V+ E +PLP+++L+G SL+LC++L Q+E+ IF GQ+V SIA
Sbjct: 571 GVGEVLVG-----NERIAVVHETSPLPIAMLSGLSLHLCMRLIQQIEEQIFAGQMVPSIA 625
Query: 766 MVETYTRLMLLAPHSLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRLLPLYRYQGKTK 825
M+ETY RL+L+AP +LF+ + + Q+ S AK G++ ++LE++NYRL+PLYR+ GK K
Sbjct: 626 MLETYVRLLLVAPQTLFQHHLNGMMQKYQSGAAKAGISLILLELLNYRLMPLYRFHGKLK 685
Query: 826 TLMYDITKIISALKVKRGDHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRI 885
L++D+ KII +K KRGDHR+ RLAENL +NL+LS ++ +K+E +TEFTETLNRI
Sbjct: 686 QLVFDMAKIIIPMKAKRGDHRLFRLAENLGINLVLSMKEVLLIKKEKGATTEFTETLNRI 745
Query: 886 TVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDK 945
V++LAI IKTRGIA+ + +L LQT LEQI+A S+HTWSEKT+R+FP LR+ L R D
Sbjct: 746 MVVSLAITIKTRGIAEFEQLLVLQTALEQILANSKHTWSEKTMRHFPQTLREVLALRSDG 805
Query: 946 RGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPE 1005
R LT+Q WQQ ETTV++QC QLL + DP + ++++HSFP HR +LCA AW+LM PE
Sbjct: 806 RLLTLQTWQQVETTVLHQCQQLL--AGDPAFAMSFVNHSFPPHRPFLCAAAWVLMDCRPE 863
Query: 1006 NINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVL 1065
N N NL + L+E SPE+VTSNIY +VD+LLHH+H++LQ GHS QDLL +A A +++ V
Sbjct: 864 NFNCGNLGKALKELSPEDVTSNIYMLVDILLHHMHLQLQHGHSQQDLLLRASATLTYLVW 923
Query: 1066 THELLPLDILLLALIDRDDDPHALRIVITLLDRQELQQ-RVKLYCMNRGPPEHWLYSGLF 1124
+ E+LP DILLLAL+DRDDD HALR+V LLDR+E QQ RV+ YC G EHWL+ G F
Sbjct: 924 SQEILPFDILLLALLDRDDDIHALRLVSLLLDRKEFQQLRVQNYCRQHGQQEHWLHPGPF 983
Query: 1125 KRVELQKALGNHLSWKERYPTFFDDIAARLLPVIPLIVYRLIENDAMDSADRVLATYSSF 1184
+RVE +ALGNHL+ KERYP FFDD+A R LPVI L+VYRLIENDA D+A+ VL YS
Sbjct: 984 QRVEPPQALGNHLAGKERYPVFFDDMALRALPVIHLVVYRLIENDATDTAEHVLTAYSPL 1043
Query: 1185 LAYYPLRFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPL 1244
L Y+P RF+FVRD LAYFYGHLP KLI+R+L+ D++K+P SE+F + +++ PP
Sbjct: 1044 LRYHPTRFTFVRDTLAYFYGHLPNKLILRLLSSLDIAKMPVSEAFIRILNTGT----PPY 1099
Query: 1245 DYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQN 1304
DY+ T+LL LVNNVIP+ ++ S S + +P S + +N ++ K FY +
Sbjct: 1100 DYYVTMLLNLVNNVIPSFTNKPRTSSPTMESFCTTRSTTPGKSPASSTNSADNHKAFYHH 1159
Query: 1305 QDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQG 1364
QDPG+Y QLVLET VIE+LSLP +Q V+ LVQI V + PT + + ++ +
Sbjct: 1160 QDPGSYCQLVLETCVIELLSLPTPPAQAVAMLVQIAVRV-PT-PPSQAYASASQSAAPRS 1217
Query: 1365 SVLPTSPSGGSTDSLGASRSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPP 1424
+LPTSP T ST +G S F+S +IQACGLLLAQLP
Sbjct: 1218 PLLPTSPPSACTAESSTPSSTSVSTGQTISPFISPQ----------VIQACGLLLAQLPR 1267
Query: 1425 DFHMQLYMEASRIIKESWWLADGKRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALL 1484
FH Y E +RI+K+ WWL D K++ E+D+A GY++ DP+WA QD TS+ IGN AL
Sbjct: 1268 QFHDVFYKEVARILKDCWWLKDPKKTPKEMDAAFGYSVWDPSWAVQDGTSSVIGNAAALF 1327
Query: 1485 HSFFSNLPQEWLEGTHVIIKHLRPITSVAMLRIVFRIMGPLLPRLVNAHTLFNKTLALLL 1544
H+F +N+ EWLE TH ++ RP+T+VA LR+ FR++GPL+PR V + LF KTLALL
Sbjct: 1328 HAFTANISFEWLENTHDVVNLQRPMTTVAQLRLAFRMLGPLVPRFVISRPLFAKTLALLF 1387
Query: 1545 NTMGDVYGKNTLPPAPV-EASEIADLIDFLHHVVHYEGQGGPVQASSKPRPEVLVLTGRA 1603
+ +V+G+N A V + +EI DL+DF+HHVV E Q QA KPRP+ L L +A
Sbjct: 1388 TMLAEVFGRN----AQVHDVTEITDLVDFMHHVVMLEAQ----QAGGKPRPDTLGLCNKA 1439
Query: 1604 AESLRPEVQHLLSHLKPDVNSSIYAATHPKMVQNP 1638
E L P+VQHL HL D SIYAATHPK+ Q P
Sbjct: 1440 VERLHPDVQHLFQHLTVDPQRSIYAATHPKIAQRP 1474
>gi|449465812|ref|XP_004150621.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Cucumis sativus]
gi|449524110|ref|XP_004169066.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Cucumis sativus]
Length = 554
Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/550 (78%), Positives = 481/550 (87%), Gaps = 4/550 (0%)
Query: 1093 ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERYPTFFDDIAA 1152
I+LLDRQELQQRVKLYC++RG PEHWL+S +FKR ELQKALGNHLSWK+RYP FFDDIAA
Sbjct: 6 ISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNELQKALGNHLSWKDRYPVFFDDIAA 65
Query: 1153 RLLPVIPLIVYRLIENDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHLPGKLIV 1212
RLLP+IPLIVYRLIENDA+D ADR+LA YS FLAY+PLRF+FVRDILAYFY HLP KLIV
Sbjct: 66 RLLPIIPLIVYRLIENDAVDQADRLLALYSPFLAYHPLRFTFVRDILAYFYSHLPNKLIV 125
Query: 1213 RILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTM 1272
RIL V D+SKIPFSESFP HISS PVMCPP+DYFATLLLGLVNNVIP+L SKSG+
Sbjct: 126 RILYVLDISKIPFSESFPTHISSPGPVMCPPMDYFATLLLGLVNNVIPSLQ-TSKSGTVG 184
Query: 1273 D---ASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSA 1329
D +S+R HNKSP T+ ++ E +K FYQ QDPGTYTQLVLETAVIE+LSLPVSA
Sbjct: 185 DNSSSSMRPSHNKSPATNPPVATSAPESQKAFYQIQDPGTYTQLVLETAVIELLSLPVSA 244
Query: 1330 SQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGASRSTPSVS 1389
QIVSSLVQIVVNIQPTLIQ+SN + A +S+GQGS +PTSPSGGSTDSL A RS SVS
Sbjct: 245 GQIVSSLVQIVVNIQPTLIQSSNNLHVAPSSMGQGSAIPTSPSGGSTDSLNAGRSNTSVS 304
Query: 1390 GINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESWWLADGKR 1449
GINT +FVSRSGYTCQQLS L+IQACGLLLAQLP +FH QLY+EASRIIKE+WWL+D R
Sbjct: 305 GINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHGQLYLEASRIIKETWWLSDATR 364
Query: 1450 SLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLRPI 1509
SLGEL+SAVGY+L+DPTWAAQDNTSTAIGN VALLHS FSNLPQEWLEG HVIIKHLRP+
Sbjct: 365 SLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRPV 424
Query: 1510 TSVAMLRIVFRIMGPLLPRLVNAHTLFNKTLALLLNTMGDVYGKNTLPPAPVEASEIADL 1569
TSVAMLRIVFRI+GPLLP+L NAH+LF KTL+ LL+ M DV+GKN+ PVEA+EIADL
Sbjct: 425 TSVAMLRIVFRIIGPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQTSIPVEAAEIADL 484
Query: 1570 IDFLHHVVHYEGQGGPVQASSKPRPEVLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYAA 1629
IDFLHHVVHYEGQGGPV ASSKPR EVL + GRA E+LRP+VQHLLSHLKPD +SIYAA
Sbjct: 485 IDFLHHVVHYEGQGGPVVASSKPRQEVLAIIGRALENLRPDVQHLLSHLKPDTTTSIYAA 544
Query: 1630 THPKMVQNPS 1639
THPK+VQNP+
Sbjct: 545 THPKLVQNPA 554
>gi|2829895|gb|AAC00603.1| hypothetical protein [Arabidopsis thaliana]
Length = 1075
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/623 (66%), Positives = 480/623 (77%), Gaps = 45/623 (7%)
Query: 158 IGYINWDTFLPSLLSSVSSAEMSAGQGSQAMPAVSATSLQQSGMLPTSSGIPNSSNYQSS 217
I YINWDTFLPSLLSSVS+AE S QG QA A + +S S S S
Sbjct: 52 ISYINWDTFLPSLLSSVSAAEASLSQGVQAAAATAGSSATSS----------QSVVPVSV 101
Query: 218 NPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSDVSCTGQ---QFTTRVNSSVRDNAIS 274
NP S LPS HGIGSP+ S ++ S ++ GQ + R + +R A++
Sbjct: 102 NPTSLLPSAHGIGSPSASEVK-------SVENGQQIARAGQIVRENAMRNSQRIRAAAVN 154
Query: 275 SLRQLCCKIILTGLEFSLKPVTHADIFYHMLNWLVTWDQKQQGIDESDGKSWRLDKALIE 334
SLRQL CKIIL G+E SLKPVTHA+IF +M+NWLV WD++ G ++S GKSWR +K L E
Sbjct: 155 SLRQLSCKIILIGVESSLKPVTHAEIFQYMMNWLVNWDRRDLGTEDSVGKSWRSEKTLAE 214
Query: 335 WLHSCLDVIWLLVDEDRCRVPFYELLRTGLQFIENIPDDEALFTLILEIHRRRDMMAMHM 394
WL SCLDVIWLLV+E R+PFYELLR+GLQFIENIPDDEALFTLI+EIHRRRD MAMHM
Sbjct: 215 WLRSCLDVIWLLVEEGESRIPFYELLRSGLQFIENIPDDEALFTLIMEIHRRRDAMAMHM 274
Query: 395 QMLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPSVLGEPLHGEDLATSIQRG 454
MLDQHLHCP+FGTHRI+SQ T N+ EA +LR+SPITYPSVLGEPL+GEDLA SI +G
Sbjct: 275 LMLDQHLHCPSFGTHRIVSQITANVPPEAVPHLRHSPITYPSVLGEPLYGEDLAMSIPKG 334
Query: 455 SLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQ-GPTPGAVFTYDMISEAVIDR 513
SLDWERA+RCIRHAIR TPSPDWWKRVL+VAPCYR Q GP PGAVFT DMI
Sbjct: 335 SLDWERAVRCIRHAIRTTPSPDWWKRVLVVAPCYRPSTQAGPIPGAVFTSDMI------- 387
Query: 514 IVELLKLTNSEVNCWHDWLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHV 573
NCW +WL+FSD+FFFL+KSGC DFVDF+DKLV RL DNHILRTNHV
Sbjct: 388 ----------YANCWQEWLVFSDIFFFLIKSGCTDFVDFIDKLVLRLNGVDNHILRTNHV 437
Query: 574 TWLLAQIIRVELVMGALNSDSRKVETTRKILSFHREDRCTDPNNPQSILLDFISSCQNLR 633
TWLLAQIIRVELVM ALNSD++KVETTRKILSFHREDR +DPNNPQS+LLDF+SSCQNLR
Sbjct: 438 TWLLAQIIRVELVMTALNSDAKKVETTRKILSFHREDRNSDPNNPQSVLLDFVSSCQNLR 497
Query: 634 IWSLNTSTREYLNNEQLQKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQP 693
IWSL+T+TR YLNNEQL KGKQIDEWWR SKG+RMMDYMNMDDRS+GMFWVVSYTMAQP
Sbjct: 498 IWSLSTTTRAYLNNEQLLKGKQIDEWWR--SKGERMMDYMNMDDRSIGMFWVVSYTMAQP 555
Query: 694 ACETVMNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMED 753
ACETV+NWLSSAG+ EL PG L PN+R+M+ +EV PLPMSLL+GFS+NLCLKLALQME+
Sbjct: 556 ACETVINWLSSAGMAEL-PG--LQPNDRVMMTQEVTPLPMSLLSGFSMNLCLKLALQMEE 612
Query: 754 SIFGGQVVASIAMVETYTRLMLL 776
++F Q ET R+ ++
Sbjct: 613 ALFVSQ--GPTEFTETLNRITIM 633
Score = 461 bits (1187), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/319 (71%), Positives = 266/319 (83%), Gaps = 7/319 (2%)
Query: 1092 VITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERYPTFFDDIA 1151
+++LL +L R+K YC NRG PEHWL + +FKR ELQKALGNHLSWK+RYPTFFDDIA
Sbjct: 757 LMSLLKTPDLLLRIKNYCQNRGSPEHWLVTQVFKRNELQKALGNHLSWKDRYPTFFDDIA 816
Query: 1152 ARLLPVIPLIVYRLIENDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHLPGKLI 1211
ARLLPVIPL++YRLIEN+AM+ AD +L +S FLAY+PLRF+FVRDILAYFYGHLPGKL+
Sbjct: 817 ARLLPVIPLVLYRLIENNAMEQADNLLLAHSHFLAYHPLRFTFVRDILAYFYGHLPGKLV 876
Query: 1212 VRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKS--- 1268
+R+L V DLSKIPFSESFPQ+IS + +CPPLDYFA+LLL LVNNVIP L+ +S
Sbjct: 877 LRMLKVLDLSKIPFSESFPQYISPTGAPVCPPLDYFASLLLNLVNNVIPPLSSSSNCSSR 936
Query: 1269 ----GSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILS 1324
+++S R PH K+P TSQ GP+N SEG+K FYQ QDPGTYTQLVLETAVIEILS
Sbjct: 937 SGSMADILNSSARPPHGKTPGTSQPGPANASEGQKAFYQIQDPGTYTQLVLETAVIEILS 996
Query: 1325 LPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGASRS 1384
LPVSA+QIVSSLVQI+VNIQ TLIQ+ NG +GA+N VGQGSVLPTSPSGGSTDS+ ASRS
Sbjct: 997 LPVSAAQIVSSLVQIIVNIQSTLIQSGNGFHGAANGVGQGSVLPTSPSGGSTDSMSASRS 1056
Query: 1385 TPSVSGINTSSFVSRSGYT 1403
T + GINT+SFVSRSGYT
Sbjct: 1057 TCLIPGINTASFVSRSGYT 1075
Score = 258 bits (658), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 122/165 (73%), Positives = 141/165 (85%), Gaps = 3/165 (1%)
Query: 853 NLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTML 912
NLC+ L L + + +G TEFTETLNRIT++ LAI IKTRGIAD DH++YLQTML
Sbjct: 601 NLCLKLALQMEEALFVS---QGPTEFTETLNRITIMTLAITIKTRGIADPDHMVYLQTML 657
Query: 913 EQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSA 972
EQI+ATSQHTWSEKT+R+FPSLLR+ L GR+DKRGL+IQAWQQAETTVINQCTQLLSPSA
Sbjct: 658 EQILATSQHTWSEKTMRHFPSLLRETLKGRVDKRGLSIQAWQQAETTVINQCTQLLSPSA 717
Query: 973 DPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLR 1017
+P YV TYLSHSFPQHRQYLCAGA +LMQGH ENINS NL+ +L+
Sbjct: 718 EPAYVSTYLSHSFPQHRQYLCAGACLLMQGHAENINSTNLMSLLK 762
Score = 80.5 bits (197), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 45/55 (81%), Gaps = 4/55 (7%)
Query: 4 NQSQRSSIGAATASSASSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPF 58
+QSQR+ A+ +SSR+YQFHPARAAIIDLFNLYLGR SRQK D+S+RDPP
Sbjct: 2 DQSQRT----VAATPSSSRSYQFHPARAAIIDLFNLYLGRGSRQKPDESLRDPPI 52
>gi|449464816|ref|XP_004150125.1| PREDICTED: uncharacterized protein LOC101220785 [Cucumis sativus]
Length = 2047
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/521 (72%), Positives = 437/521 (83%), Gaps = 32/521 (6%)
Query: 4 NQSQRSSIGAATASSASSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPFFNLRL 63
+QSQRS ++ + ++SRAYQFHPARAAI++LF+LYLGRS+R K +DS R+PP
Sbjct: 2 DQSQRS---SSLTTVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPP------ 52
Query: 64 LIRGLVACCGGILLIVEEFMLRNKTQKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQL 123
NK QKRVLA+NRELPPRNEQFL+DFEQ+Q+QF D DQL
Sbjct: 53 ----------------------NKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQL 90
Query: 124 RSVTESVLISMVVQCCSHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQ 183
R+VTESVLIS+VVQC HVPRAEF+LFALRSLCSIGYINWDTFLPSLLSS+SSAE+S GQ
Sbjct: 91 RAVTESVLISLVVQCSGHVPRAEFLLFALRSLCSIGYINWDTFLPSLLSSISSAEVSMGQ 150
Query: 184 GSQAMPAVSATSLQQSGMLPTSSGIPNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVCA 243
GSQA P VS T+L QSG+LP+S+ +PNSS +QSSNPASPLP VHGI SPAQS+I+ S C
Sbjct: 151 GSQAAPTVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPLVHGISSPAQSSIDPSSCT 210
Query: 244 AMSPVKSSDVSCTGQQFTTRVNSSVRDNAISSLRQLCCKIILTGLEFSLKPVTHADIFYH 303
A+SP+KSSD+S TG RVNS +R+NAISSLRQLCCKIIL+GL+F LKPVTHADIF H
Sbjct: 211 ALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSH 270
Query: 304 MLNWLVTWDQKQQGIDESDG-KSWRLDKALIEWLHSCLDVIWLLVDEDRCRVPFYELLRT 362
MLNW+V WDQ+QQG++ES+ KSWR DKALIEWLHSCLDV+WLLV+E++CRVPFYELLR+
Sbjct: 271 MLNWMVNWDQRQQGMEESENMKSWRPDKALIEWLHSCLDVVWLLVEENKCRVPFYELLRS 330
Query: 363 GLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTPNISVE 422
GLQFI+NIPDDEALFTL+LEIHRRRDMMAMHMQMLDQHLH PTFGT RI SQT NIS E
Sbjct: 331 GLQFIDNIPDDEALFTLMLEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGE 390
Query: 423 AAGNLRYSPITYPSVLGEPLHGEDLATSIQRGSLDWERAMRCIRHAIRATPSPDWWKRVL 482
A +LRYSPITYPSVLGEPLHGED+A++IQRG+ DWERAMRCIRHA+R TPSPDWWKRVL
Sbjct: 391 AVASLRYSPITYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVL 450
Query: 483 LVAPCYRNPAQGPTPGAVFTYDMISEAVIDRIVELLKLTNS 523
LVAP YR+ AQG +PGAVFT +MI EA IDRI ELLKLTNS
Sbjct: 451 LVAPGYRSSAQGLSPGAVFTSEMICEATIDRIFELLKLTNS 491
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/427 (75%), Positives = 362/427 (84%), Gaps = 9/427 (2%)
Query: 667 DRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTELFPGSNLPPNERLMVMR 726
DR++DYMNMDDRS+GMFWVVSYTMAQPACETVMNWL+SAG EL NL NER+MVMR
Sbjct: 1571 DRIVDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLTSAGAPELSSAQNLQTNERIMVMR 1630
Query: 727 EVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAPHSLFRSLF 786
EV+PLPMSLL+GFS+NLC KLA QME+S+F GQ V SIA+ ETYTRL+LLAPHSLFRS F
Sbjct: 1631 EVSPLPMSLLSGFSMNLCSKLAYQMEESLFSGQAVPSIALAETYTRLLLLAPHSLFRSHF 1690
Query: 787 SHLAQRNPSLLAKVGVTPLVLEIVNYRLLPLYRYQGKTKTLMYDITKIISALKVKRGDHR 846
++L + ++ + +L L RYQGK+K LMYD+TKIISALK KRGDHR
Sbjct: 1691 NNLIR---------CFFLVIWGTLRCFVLLLSRYQGKSKALMYDVTKIISALKGKRGDHR 1741
Query: 847 VLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHVL 906
V RLAENLCMNLI S RDFF +KREGKG TEFTETLNR+ V+ LAI+IKTRGIADADH+L
Sbjct: 1742 VFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRGIADADHLL 1801
Query: 907 YLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQ 966
YLQTMLEQ MATSQHTWSEKTLRYFP +LR+ LIGRIDKRG+ IQAWQQAETTVINQC Q
Sbjct: 1802 YLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAETTVINQCNQ 1861
Query: 967 LLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTS 1026
LLSPSADPTYV TY+SHSFPQH+QYLCAGAWILMQGHPE+IN L RVLREFSPEEVT+
Sbjct: 1862 LLSPSADPTYVMTYISHSFPQHKQYLCAGAWILMQGHPESINCTTLARVLREFSPEEVTA 1921
Query: 1027 NIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDP 1086
NIYTMVDVLLHHI +E Q GHS QD+L K CAN+SFFV T ELLPLDILLLA IDRDDDP
Sbjct: 1922 NIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLAFIDRDDDP 1981
Query: 1087 HALRIVI 1093
+ALRIV+
Sbjct: 1982 NALRIVV 1988
>gi|449526148|ref|XP_004170076.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like, partial [Cucumis sativus]
Length = 479
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/439 (79%), Positives = 392/439 (89%), Gaps = 1/439 (0%)
Query: 86 NKTQKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCCSHVPRA 145
NK QKRVLA+NRELPPRNEQFL+DFEQ+Q+QF D DQLR+VTESVLIS+VVQC HVPRA
Sbjct: 1 NKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRA 60
Query: 146 EFILFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQGSQAMPAVSATSLQQSGMLPTS 205
EF+LFALRSLCSIGYINWDTFLPSLLSS+SSAE+S GQGSQA P VS T+L QSG+LP+S
Sbjct: 61 EFLLFALRSLCSIGYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSS 120
Query: 206 SGIPNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSDVSCTGQQFTTRVN 265
+ +PNSS +QSSNPASPLP VHGI SPAQS+I+ S C A+SP+KSSD+S TG RVN
Sbjct: 121 NPVPNSSTFQSSNPASPLPLVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVN 180
Query: 266 SSVRDNAISSLRQLCCKIILTGLEFSLKPVTHADIFYHMLNWLVTWDQKQQGIDESDG-K 324
S +R+NAISSLRQLCCKIIL+GL+F LKPVTHADIF HMLNW+V WDQ+QQG++ES+ K
Sbjct: 181 SFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMK 240
Query: 325 SWRLDKALIEWLHSCLDVIWLLVDEDRCRVPFYELLRTGLQFIENIPDDEALFTLILEIH 384
SWR DKALIEWLHSCLDV+WLLV+E++CRVPFYELLR+GLQFI+NIPDDEALFTL+LEIH
Sbjct: 241 SWRPDKALIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLMLEIH 300
Query: 385 RRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPSVLGEPLHG 444
RRRDMMAMHMQMLDQHLH PTFGT RI SQT NIS EA +LRYSPITYPSVLGEPLHG
Sbjct: 301 RRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHG 360
Query: 445 EDLATSIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQGPTPGAVFTYD 504
ED+A++IQRG+ DWERAMRCIRHA+R TPSPDWWKRVLLVAP YR+ AQG +PGAVFT +
Sbjct: 361 EDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSE 420
Query: 505 MISEAVIDRIVELLKLTNS 523
MI EA IDRI ELLKLTNS
Sbjct: 421 MICEATIDRIFELLKLTNS 439
>gi|224099537|ref|XP_002311523.1| predicted protein [Populus trichocarpa]
gi|222851343|gb|EEE88890.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 641 bits (1653), Expect = e-180, Method: Compositional matrix adjust.
Identities = 328/442 (74%), Positives = 363/442 (82%), Gaps = 29/442 (6%)
Query: 5 QSQRSSIGAATASSASSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPFFNLRLL 64
QSQRS AA ++SASSR +QFHPARAAIIDLFNLYLGRSSRQK DDS R+ P
Sbjct: 3 QSQRSITAAAASASASSRGHQFHPARAAIIDLFNLYLGRSSRQKPDDSARELP------- 55
Query: 65 IRGLVACCGGILLIVEEFMLRNKTQKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQLR 124
NKTQKRVLALNRELPP NEQFL+DFEQL +QFPDQ+QLR
Sbjct: 56 ---------------------NKTQKRVLALNRELPPPNEQFLLDFEQLHTQFPDQEQLR 94
Query: 125 SVTESVLISMVVQCCSHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQG 184
+VTESVLI++VVQC +H PRA+F+LFALRSLCSI YINWD+FLPSLLSSVS+ E+S Q
Sbjct: 95 AVTESVLITLVVQCSNHAPRADFLLFALRSLCSIEYINWDSFLPSLLSSVSTTELSVSQA 154
Query: 185 SQAMPAVSATSLQQSGMLPTSSGIPNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVCAA 244
QA+PAVS+T L Q+GMLP+SS I NSS +QS NP SPL SVHGIGSPA +E S A
Sbjct: 155 GQAVPAVSSTGLAQNGMLPSSSTISNSSIFQSLNPTSPLSSVHGIGSPAPLGMEASPSVA 214
Query: 245 MSPVKSSDVSCTGQQFTTRVNSSVRDNAISSLRQLCCKIILTGLEFSLKPVTHADIFYHM 304
MSPVKSSD+S G Q + RVN +RD+A+SSLRQLCCKIILTGLEF+LKPVTHADIF HM
Sbjct: 215 MSPVKSSDISGNGPQSSARVNLLIRDSAMSSLRQLCCKIILTGLEFNLKPVTHADIFNHM 274
Query: 305 LNWLVTWDQKQQGIDESDG-KSWRLDKALIEWLHSCLDVIWLLVDEDRCRVPFYELLRTG 363
L+WLV WDQ+Q G+DESDG KSWR KALIEWLHSCLDVIWLLVDED+CRVPFYELLR+G
Sbjct: 275 LSWLVNWDQRQHGVDESDGVKSWRPVKALIEWLHSCLDVIWLLVDEDKCRVPFYELLRSG 334
Query: 364 LQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTPNISVEA 423
LQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHR+LS T P +SVEA
Sbjct: 335 LQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRVLSPTIPTVSVEA 394
Query: 424 AGNLRYSPITYPSVLGEPLHGE 445
NLRYSPITYPSVLGEPLHGE
Sbjct: 395 VANLRYSPITYPSVLGEPLHGE 416
>gi|413938728|gb|AFW73279.1| hypothetical protein ZEAMMB73_787088 [Zea mays]
Length = 284
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/284 (72%), Positives = 238/284 (83%), Gaps = 3/284 (1%)
Query: 1358 SNSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGL 1417
S +GQ S LPTSPSG + +S G +++ + +GIN ++FVSRSGY+CQQLS L+IQACGL
Sbjct: 2 SGGLGQSSGLPTSPSGAA-ESSGPNQANSAATGINATNFVSRSGYSCQQLSVLMIQACGL 60
Query: 1418 LLAQLPPDFHMQLYMEASRIIKESWWLADGKRSLGELDSAVGYALLDPTWAAQDNTSTAI 1477
LLAQLPP+FHMQLY EA+R+IK+ WWLADG R + ELDSAVGYALLDPTWA+QDNTSTAI
Sbjct: 61 LLAQLPPEFHMQLYSEAARVIKDCWWLADGSRPVKELDSAVGYALLDPTWASQDNTSTAI 120
Query: 1478 GNIVALLHSFFSNLPQEWLEGTHVIIKHLRPITSVAMLRIVFRIMGPLLPRLVNAHTLFN 1537
GNIVALLHSFFSNLPQEWLE TH +IKHLRP+ SVAMLRI FRI+GPLLPRL A LF
Sbjct: 121 GNIVALLHSFFSNLPQEWLESTHTVIKHLRPVNSVAMLRIAFRILGPLLPRLAFARPLFM 180
Query: 1538 KTLALLLNTMGDVYGKN--TLPPAPVEASEIADLIDFLHHVVHYEGQGGPVQASSKPRPE 1595
KTLALL N +GDV+GKN P PVEASEIAD+IDFLHH V YEGQGGPVQ++SKP+ E
Sbjct: 181 KTLALLFNVLGDVFGKNPQVSNPNPVEASEIADIIDFLHHAVMYEGQGGPVQSTSKPKLE 240
Query: 1596 VLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYAATHPKMVQNPS 1639
+L L G+ E LRP+VQHLLSHLK D SSIYAATHPK+VQNPS
Sbjct: 241 ILTLCGKVIEILRPDVQHLLSHLKIDPTSSIYAATHPKLVQNPS 284
>gi|293331147|ref|NP_001170305.1| uncharacterized protein LOC100384269 [Zea mays]
gi|224034953|gb|ACN36552.1| unknown [Zea mays]
Length = 308
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/281 (72%), Positives = 234/281 (83%), Gaps = 3/281 (1%)
Query: 1358 SNSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGL 1417
S +GQ S LPTSPSG + +S G +++ + +GIN ++FVSRSGY+CQQLS L+IQACGL
Sbjct: 2 SGGLGQSSGLPTSPSGAA-ESSGPNQANSAATGINATNFVSRSGYSCQQLSVLMIQACGL 60
Query: 1418 LLAQLPPDFHMQLYMEASRIIKESWWLADGKRSLGELDSAVGYALLDPTWAAQDNTSTAI 1477
LLAQLPP+FHMQLY EA+R IK+ WWLADG R + ELDSAVGYALLDPTWA+QDNTSTAI
Sbjct: 61 LLAQLPPEFHMQLYSEAARAIKDCWWLADGSRPVKELDSAVGYALLDPTWASQDNTSTAI 120
Query: 1478 GNIVALLHSFFSNLPQEWLEGTHVIIKHLRPITSVAMLRIVFRIMGPLLPRLVNAHTLFN 1537
GNIVALLHSFFSNLPQEWLE TH +IKHLRP+ SVAMLRI FRI+GPLLPRL A LF
Sbjct: 121 GNIVALLHSFFSNLPQEWLESTHTVIKHLRPVNSVAMLRIAFRILGPLLPRLAFARPLFM 180
Query: 1538 KTLALLLNTMGDVYGKN--TLPPAPVEASEIADLIDFLHHVVHYEGQGGPVQASSKPRPE 1595
KTLALL N +GDV+GKN P PVEASEIAD+IDFLHH V YEGQGGPVQ++SKP+ E
Sbjct: 181 KTLALLFNVLGDVFGKNPQVSNPNPVEASEIADIIDFLHHAVMYEGQGGPVQSTSKPKLE 240
Query: 1596 VLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYAATHPKMVQ 1636
+L L G+ E LRP+VQHLLSHLK D SSIYAATHPK+VQ
Sbjct: 241 ILTLCGKVIEILRPDVQHLLSHLKIDPTSSIYAATHPKLVQ 281
>gi|449521180|ref|XP_004167608.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Cucumis sativus]
Length = 409
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 234/451 (51%), Positives = 277/451 (61%), Gaps = 110/451 (24%)
Query: 690 MAQPACETVMNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLAL 749
MAQPACETVMNWL+SAG EL NL NER+MVMREV+PLPMSLL+GFS+NLC KLA
Sbjct: 1 MAQPACETVMNWLTSAGAPELSSAQNLQTNERIMVMREVSPLPMSLLSGFSMNLCSKLAY 60
Query: 750 QMEDSIFGGQVVASIAMVETYTRLMLLAPHSLFRSLFS-------HLAQRNPSLLAKVGV 802
QME+S+F GQ V SIA+ ETYTRL+LLAPHSLFRS F+ HLAQRNPSLL++ GV
Sbjct: 61 QMEESLFSGQAVPSIALAETYTRLLLLAPHSLFRSHFNLTHSLLQHLAQRNPSLLSRPGV 120
Query: 803 TPLVLEIVNYRLLPLYR---------------------------------------YQGK 823
T LVLEI+NYRLLPLYR G
Sbjct: 121 TLLVLEILNYRLLPLYRASSWSIQSSSLKKQSQRLRRSMIHSCSNGSFNSRLAIKNISGP 180
Query: 824 TKTLMYDITKIISALKVK-RGDHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETL 882
+K+ I+ + + ++ +G + L ++ + +R + +G TEFTETL
Sbjct: 181 SKSRDKSISYVEAVKDIRYQGKSKALMYDVTKIISALKGKRG------DHRGPTEFTETL 234
Query: 883 NRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGR 942
NR+ V+ LAI+IKTRGIADADH+LYLQTMLEQ MATSQHTWSEKTLRYFP +LR+ LIGR
Sbjct: 235 NRLAVVTLAILIKTRGIADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGR 294
Query: 943 IDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQG 1002
IDKRG+ IQAWQQA +L +
Sbjct: 295 IDKRGVAIQAWQQAR----------------------------------------VLREF 314
Query: 1003 HPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISF 1062
PE EVT+NIYTMVDVLLHHI +E Q GHS QD+L K CAN+SF
Sbjct: 315 SPE-----------------EVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSF 357
Query: 1063 FVLTHELLPLDILLLALIDRDDDPHALRIVI 1093
FV T ELLPLDILLLA IDRDDDP+ALRIV+
Sbjct: 358 FVWTQELLPLDILLLAFIDRDDDPNALRIVV 388
>gi|255622028|ref|XP_002540252.1| hypothetical protein RCOM_2112670 [Ricinus communis]
gi|223497650|gb|EEF22131.1| hypothetical protein RCOM_2112670 [Ricinus communis]
Length = 223
Score = 346 bits (887), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 177/223 (79%), Positives = 199/223 (89%)
Query: 86 NKTQKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCCSHVPRA 145
NKTQKRVLALNRELPPRNEQFLI+FEQLQSQFPDQDQLRSVTESVLIS+V+QCC+H PRA
Sbjct: 1 NKTQKRVLALNRELPPRNEQFLINFEQLQSQFPDQDQLRSVTESVLISLVIQCCNHAPRA 60
Query: 146 EFILFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQGSQAMPAVSATSLQQSGMLPTS 205
EF+LFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQ Q + A+S+ + Q+ +LP+S
Sbjct: 61 EFLLFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQAGQTVSAISSMNSSQNVILPSS 120
Query: 206 SGIPNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSDVSCTGQQFTTRVN 265
S IPNSSN+Q SNP SPL SVHGIGSP QSAIE S+ A +SPVKSSD+S GQ T+RVN
Sbjct: 121 SAIPNSSNFQPSNPTSPLASVHGIGSPVQSAIEPSLLATVSPVKSSDISGNGQPSTSRVN 180
Query: 266 SSVRDNAISSLRQLCCKIILTGLEFSLKPVTHADIFYHMLNWL 308
S RDNAI+SLRQLCCKIILTGLEF+LKP TH++IF+HMLNWL
Sbjct: 181 LSSRDNAINSLRQLCCKIILTGLEFNLKPATHSEIFHHMLNWL 223
>gi|255594742|ref|XP_002536154.1| conserved hypothetical protein [Ricinus communis]
gi|223520667|gb|EEF26229.1| conserved hypothetical protein [Ricinus communis]
Length = 254
Score = 283 bits (724), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 137/189 (72%), Positives = 157/189 (83%), Gaps = 1/189 (0%)
Query: 198 QSGMLPTSSGIPNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSDVSCTG 257
Q+ +LP+SS IPNSSN+Q SNP SPL SVHGIGSP QSAIE S+ A +SPVKSSD+S G
Sbjct: 5 QNVILPSSSAIPNSSNFQPSNPTSPLASVHGIGSPVQSAIEPSLLATVSPVKSSDISGNG 64
Query: 258 QQFTTRVNSSVRDNAISSLRQLCCKIILTGLEFSLKPVTHADIFYHMLNWLVTWDQKQQG 317
Q T+RVN S RDNAI SLRQLCCKIILTGLEF+LKP TH++IF+HMLNWLV WDQ+Q G
Sbjct: 65 QPSTSRVNLSSRDNAICSLRQLCCKIILTGLEFNLKPATHSEIFHHMLNWLVNWDQRQHG 124
Query: 318 IDESDG-KSWRLDKALIEWLHSCLDVIWLLVDEDRCRVPFYELLRTGLQFIENIPDDEAL 376
+DESD +SWR +KALIEWLHSCLDVIWLLVDE++CRVPFYELLR+GLQFIENIP +
Sbjct: 125 VDESDSVRSWRPEKALIEWLHSCLDVIWLLVDENKCRVPFYELLRSGLQFIENIPTAQKK 184
Query: 377 FTLILEIHR 385
L I R
Sbjct: 185 QDLANSIQR 193
Score = 114 bits (285), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/57 (85%), Positives = 53/57 (92%)
Query: 445 EDLATSIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQGPTPGAVF 501
+DLA SIQRGSLDWERA+RCIRHA+R TPSPDWWKRVLLVAP YR+PA GPTPGAVF
Sbjct: 185 QDLANSIQRGSLDWERALRCIRHALRTTPSPDWWKRVLLVAPSYRSPAHGPTPGAVF 241
>gi|358347248|ref|XP_003637671.1| hypothetical protein MTR_097s0013, partial [Medicago truncatula]
gi|355503606|gb|AES84809.1| hypothetical protein MTR_097s0013, partial [Medicago truncatula]
Length = 316
Score = 228 bits (580), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/133 (79%), Positives = 118/133 (88%)
Query: 1415 CGLLLAQLPPDFHMQLYMEASRIIKESWWLADGKRSLGELDSAVGYALLDPTWAAQDNTS 1474
CGLLLAQLP DFH QLY+E +RIIKE+WWL D KRSL E+DSAVGYALLDPTWAAQDNTS
Sbjct: 1 CGLLLAQLPSDFHSQLYLETTRIIKENWWLTDVKRSLAEIDSAVGYALLDPTWAAQDNTS 60
Query: 1475 TAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLRPITSVAMLRIVFRIMGPLLPRLVNAHT 1534
TAIGN+VALLHSFFSNLPQEWLEGT+VIIK LRP+TSVAMLRI FRIM PLLP+L NAH
Sbjct: 61 TAIGNVVALLHSFFSNLPQEWLEGTNVIIKQLRPVTSVAMLRIAFRIMSPLLPKLANAHA 120
Query: 1535 LFNKTLALLLNTM 1547
LFNK ++ +T+
Sbjct: 121 LFNKVHKIINSTV 133
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/119 (65%), Positives = 96/119 (80%), Gaps = 6/119 (5%)
Query: 1527 PRLVNAHTLF------NKTLALLLNTMGDVYGKNTLPPAPVEASEIADLIDFLHHVVHYE 1580
PR V T++ N TL++LL+ + DV+GKN+ V+ASEIAD+IDFLHHV+HYE
Sbjct: 198 PRSVGPPTIYIPCSKPNNTLSILLSVLVDVFGKNSQTSTAVDASEIADIIDFLHHVIHYE 257
Query: 1581 GQGGPVQASSKPRPEVLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYAATHPKMVQNPS 1639
GQGGPVQASSKPRP+VL L GRAAESLRP++QHLLSHL DVNSS+YAA+HPK+V NP+
Sbjct: 258 GQGGPVQASSKPRPDVLALIGRAAESLRPDIQHLLSHLNTDVNSSVYAASHPKLVPNPT 316
>gi|224111458|ref|XP_002315863.1| predicted protein [Populus trichocarpa]
gi|222864903|gb|EEF02034.1| predicted protein [Populus trichocarpa]
Length = 219
Score = 221 bits (562), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/115 (90%), Positives = 109/115 (94%)
Query: 1367 LPTSPSGGSTDSLGASRSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDF 1426
LPTSP GGSTDSLG SRS+PSVSGINTS+FV RSGYTCQQLSCLLIQACGLLLAQLPPDF
Sbjct: 31 LPTSPYGGSTDSLGGSRSSPSVSGINTSNFVLRSGYTCQQLSCLLIQACGLLLAQLPPDF 90
Query: 1427 HMQLYMEASRIIKESWWLADGKRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIV 1481
H+QLYMEASRIIKESWWL DGKRSLGELDSAVGYALLDPTWAAQDNTSTAI ++
Sbjct: 91 HVQLYMEASRIIKESWWLTDGKRSLGELDSAVGYALLDPTWAAQDNTSTAIAQVM 145
>gi|255647160|gb|ACU24048.1| unknown [Glycine max]
Length = 126
Score = 204 bits (520), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 94/126 (74%), Positives = 109/126 (86%)
Query: 1514 MLRIVFRIMGPLLPRLVNAHTLFNKTLALLLNTMGDVYGKNTLPPAPVEASEIADLIDFL 1573
MLRI FR+MGPLLP+L NAH LFNKTL+ LL + DV+GKN+ V+AS+IAD+IDFL
Sbjct: 1 MLRIAFRVMGPLLPKLANAHALFNKTLSSLLTILVDVFGKNSQTSIAVDASDIADIIDFL 60
Query: 1574 HHVVHYEGQGGPVQASSKPRPEVLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYAATHPK 1633
HHVVHYEGQGGPVQASSKPRPEVL L GRA+ESLRP++QHLLSHL PDVNSS+YAA HPK
Sbjct: 61 HHVVHYEGQGGPVQASSKPRPEVLALIGRASESLRPDIQHLLSHLNPDVNSSVYAAFHPK 120
Query: 1634 MVQNPS 1639
+ QNP+
Sbjct: 121 LAQNPT 126
>gi|224099541|ref|XP_002311525.1| predicted protein [Populus trichocarpa]
gi|222851345|gb|EEE88892.1| predicted protein [Populus trichocarpa]
Length = 110
Score = 175 bits (444), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/103 (79%), Positives = 93/103 (90%)
Query: 1536 FNKTLALLLNTMGDVYGKNTLPPAPVEASEIADLIDFLHHVVHYEGQGGPVQASSKPRPE 1595
F KTL+LLLNTM DV+G+N+ VEASEIADL+DFLHHVVHYEGQGGPVQA+SKP+ E
Sbjct: 7 FRKTLSLLLNTMVDVFGRNSQTSTAVEASEIADLVDFLHHVVHYEGQGGPVQANSKPKAE 66
Query: 1596 VLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYAATHPKMVQNP 1638
VL L GRAAESLRP++QHLLSHLKPD+NSSIYAATHPK+VQNP
Sbjct: 67 VLALCGRAAESLRPDLQHLLSHLKPDMNSSIYAATHPKLVQNP 109
>gi|376335839|gb|AFB32579.1| hypothetical protein 0_15187_01, partial [Larix decidua]
gi|376335841|gb|AFB32580.1| hypothetical protein 0_15187_01, partial [Larix decidua]
gi|376335843|gb|AFB32581.1| hypothetical protein 0_15187_01, partial [Larix decidua]
Length = 151
Score = 164 bits (416), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/151 (56%), Positives = 109/151 (72%)
Query: 1323 LSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGAS 1382
LSLP S QIVS+LVQIVV++QPT +Q+S+ G S+ + Q S+LPTSPSGG+ DS+ +
Sbjct: 1 LSLPPSVPQIVSTLVQIVVHVQPTQVQSSHSVQGMSSGISQSSMLPTSPSGGTGDSMSTN 60
Query: 1383 RSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESW 1442
+ST S G+N + + Q S L+IQACGLLLAQLP FHMQ Y+EA+R+IK+ W
Sbjct: 61 KSTASAPGLNATGTGLGNSSAAQASSSLMIQACGLLLAQLPSPFHMQFYLEAARVIKDCW 120
Query: 1443 WLADGKRSLGELDSAVGYALLDPTWAAQDNT 1473
WL D ++ ELDSA GYAL DPTWA QDNT
Sbjct: 121 WLTDVTKTSLELDSAFGYALWDPTWAFQDNT 151
>gi|376335849|gb|AFB32584.1| hypothetical protein 0_15187_01, partial [Pinus mugo]
Length = 151
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/151 (55%), Positives = 107/151 (70%)
Query: 1323 LSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGAS 1382
LSLP S QIVS+LVQIVV++QP+ +Q+S G S+ + Q S++PTSPSGG+ DS+ +
Sbjct: 1 LSLPPSVPQIVSTLVQIVVHVQPSQVQSSLSTQGMSSGISQSSIMPTSPSGGTADSMSTN 60
Query: 1383 RSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESW 1442
+ST S G+N S S + Q S L+IQACGLLLAQLP FHM Y EA+R+IK+ W
Sbjct: 61 KSTASAPGLNASGTGSGNSSAAQASSSLMIQACGLLLAQLPSPFHMHFYAEAARVIKDCW 120
Query: 1443 WLADGKRSLGELDSAVGYALLDPTWAAQDNT 1473
W+ D ++ ELDSA GYAL DPTWA QDNT
Sbjct: 121 WVTDVTKTSLELDSAFGYALWDPTWAFQDNT 151
>gi|361067285|gb|AEW07954.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|376335845|gb|AFB32582.1| hypothetical protein 0_15187_01, partial [Pinus cembra]
gi|376335847|gb|AFB32583.1| hypothetical protein 0_15187_01, partial [Pinus cembra]
Length = 151
Score = 160 bits (406), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/151 (55%), Positives = 107/151 (70%)
Query: 1323 LSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGAS 1382
LSLP S QIVS+LVQIVV++QP+ +Q+S G S+ + Q S++PTSPSGG+ DS+ +
Sbjct: 1 LSLPPSVPQIVSTLVQIVVHVQPSQVQSSLSTQGMSSGISQSSIMPTSPSGGTADSMSTN 60
Query: 1383 RSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESW 1442
+S+ S GIN S S + Q S L+IQACGLLLAQLP FHM Y EA+R+IK+ W
Sbjct: 61 KSSASAPGINASGTGSGNSSAAQASSSLMIQACGLLLAQLPSLFHMHFYAEAARVIKDCW 120
Query: 1443 WLADGKRSLGELDSAVGYALLDPTWAAQDNT 1473
W+ D ++ ELDSA GYAL DPTWA QDNT
Sbjct: 121 WVTDVTKTSLELDSAFGYALWDPTWAFQDNT 151
>gi|383165037|gb|AFG65351.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165038|gb|AFG65352.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165039|gb|AFG65353.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165040|gb|AFG65354.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165041|gb|AFG65355.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165042|gb|AFG65356.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165043|gb|AFG65357.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165044|gb|AFG65358.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165045|gb|AFG65359.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165046|gb|AFG65360.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165047|gb|AFG65361.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165048|gb|AFG65362.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165049|gb|AFG65363.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165050|gb|AFG65364.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165051|gb|AFG65365.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165052|gb|AFG65366.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165053|gb|AFG65367.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
Length = 151
Score = 160 bits (405), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 83/151 (54%), Positives = 106/151 (70%)
Query: 1323 LSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGAS 1382
LSLP S QIVS+LVQIVV++QP+ +Q+ G S+ + Q S++PTSPSGG+ DS+ +
Sbjct: 1 LSLPPSVPQIVSTLVQIVVHVQPSQVQSGLSTQGMSSGISQSSIMPTSPSGGTADSMSTN 60
Query: 1383 RSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESW 1442
+ST S G+N S S + Q S L+IQACGLLLAQLP FHM Y EA+R+IK+ W
Sbjct: 61 KSTASAPGLNASGTGSGNSSAAQASSSLMIQACGLLLAQLPSPFHMHFYAEAARVIKDCW 120
Query: 1443 WLADGKRSLGELDSAVGYALLDPTWAAQDNT 1473
W+ D ++ ELDSA GYAL DPTWA QDNT
Sbjct: 121 WVTDVTKTSLELDSAFGYALWDPTWAFQDNT 151
>gi|255596295|ref|XP_002536505.1| hypothetical protein RCOM_2148230 [Ricinus communis]
gi|223519465|gb|EEF25878.1| hypothetical protein RCOM_2148230 [Ricinus communis]
Length = 95
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/129 (65%), Positives = 88/129 (68%), Gaps = 34/129 (26%)
Query: 1 MDQNQSQRSSIGAATASSASSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPFFN 60
MDQNQ SI A TA+S R YQF PARAAIIDLFNLYLGRSSRQK DDS R+PP
Sbjct: 1 MDQNQR---SIAATTAAS---RGYQFQPARAAIIDLFNLYLGRSSRQKHDDSTREPP--- 51
Query: 61 LRLLIRGLVACCGGILLIVEEFMLRNKTQKRVLALNRELPPRNEQFLIDFEQLQSQFPDQ 120
NKTQKRVLALNRELPPRNEQFLI+FEQLQSQFPDQ
Sbjct: 52 -------------------------NKTQKRVLALNRELPPRNEQFLINFEQLQSQFPDQ 86
Query: 121 DQLRSVTES 129
DQLRSVTES
Sbjct: 87 DQLRSVTES 95
>gi|255591729|ref|XP_002535579.1| conserved hypothetical protein [Ricinus communis]
gi|223522616|gb|EEF26804.1| conserved hypothetical protein [Ricinus communis]
Length = 56
Score = 110 bits (276), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/56 (87%), Positives = 52/56 (92%)
Query: 446 DLATSIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQGPTPGAVF 501
DLA SIQRGSLDWERA+RCIRHA+R TPSPDWWKRVLLVAP YR+PA GPTPGAVF
Sbjct: 1 DLANSIQRGSLDWERALRCIRHALRTTPSPDWWKRVLLVAPSYRSPAHGPTPGAVF 56
>gi|330842176|ref|XP_003293059.1| hypothetical protein DICPUDRAFT_157857 [Dictyostelium purpureum]
gi|325076644|gb|EGC30414.1| hypothetical protein DICPUDRAFT_157857 [Dictyostelium purpureum]
Length = 1559
Score = 99.4 bits (246), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 169/831 (20%), Positives = 357/831 (42%), Gaps = 132/831 (15%)
Query: 505 MISEAVIDRIVELL-KLTNSEVN------CWHDWLIFSDVFFFLVKSGCIDFVDFVDKLV 557
+I+EA I + ++LL K ++ W +W++FSD F+ LV+ ID ++ L
Sbjct: 414 IITEAAILKTLQLLNKYPKQSIDNQITSDSWKEWILFSDQFYSLVEGTLIDLEQYIVGLS 473
Query: 558 -SRLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVET------TRKILSFHRED 610
R+ DGD ++ N V +L +I + V D + V T +LSF +
Sbjct: 474 EKRMNDGDT--IKDNMVLYLFTKITNITEVKQLFMQDLQIVNANNFGYLTPIVLSFCNNN 531
Query: 611 RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQK--GKQIDE---------- 658
+ +S QNL ++ + + + +Q + +D+
Sbjct: 532 EV------------YTASSQNLSLYFFLLKISKDIPDADIQSYVKRVLDKCQFNHAIFPF 579
Query: 659 ---WWRQVSKGDRMMDYMNM--DDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTELFPG 713
WW V + + +++ D R ++ V T ++ E + + S+ FPG
Sbjct: 580 YRNWW-DVERSKQKQEFITTTEDIRLYSIYCTVIPTDSE--AEIIKYYYSNTEQQYYFPG 636
Query: 714 SNLPPNERLMVMREVNPLPMSLLTGFSLNL---CLKLALQMEDSIFGGQVVASIAMVETY 770
+ V +V P+ +L LN+ C K LQ + + A +E Y
Sbjct: 637 G-------IKVNGKVKPVSNLIL----LNMPHRCRKNLLQEFSMLLDKDGLIPPAFLEDY 685
Query: 771 TRLMLLAPHSLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRLLPLYRYQGKTKTLMYD 830
+L+ P SL + S+L + + K VLE+V++RL L + + ++
Sbjct: 686 NKLVHYTPSSLLQLPLSYLKR-----IEKTIPYHTVLELVSHRLFKLLKGNKELPIILKT 740
Query: 831 ITKI-----ISALKVKRG-DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNR 884
+ + I L++ + D+ +L+++ + ++ ILS +DF LK G LNR
Sbjct: 741 LQDVQSLKPIQNLQLSKSIDYLILKISNSFGID-ILSNKDF--LKTLNIGPL-----LNR 792
Query: 885 ITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRID 944
+ +A +IK +GI++ V + +E + +S+ +L +FP ++ A +I+
Sbjct: 793 RVITTIARLIKIKGISEYSRVQDVPIFIENAYKNYPYMFSKTSLEFFPDFMK-AEFEKIN 851
Query: 945 KRGL------TIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQ--YLCAGA 996
+ + IQ Q + ++ +Q ++LL + L H ++ + C
Sbjct: 852 HQPIKPPTLQKIQHENQQKLSLFSQGSKLLVQQK-----QNILQHYQQENNTSLFFCQIF 906
Query: 997 WILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQ--DLLF 1054
+++ +N L++ L P I + + + I E+ HS DL+
Sbjct: 907 VYILEAKIKNEILMPLVQQLVFVPPGIGNVQITKLTAIFVDFILDEVIANHSQNKADLVK 966
Query: 1055 KACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-ITLLDRQELQQRVKLY----- 1108
K + ++ +++ L+ ++L L+DRDD+ ++ +I+ + L E+++RV+ +
Sbjct: 967 KVSEILCQWIFKYKIFSLNTIILFLLDRDDNIYSYQILDLMLFSSSEIKERVQFFEQKHF 1026
Query: 1109 ---CMNRGPPEHWL----YSGLFKRVELQKALGNHLSWKE------RYPTFFDDIAARLL 1155
+ + ++L ++ LF +L L + + E P ++ + +R +
Sbjct: 1027 RDNVVYKTDDNYFLKNIEFNSLFN--DLIPTLTDPTTHSEISFPGAALPIYYSNTISRFI 1084
Query: 1156 PVIPLIVYRLIENDAMDSADRVLATYS-SFLAYYPLRFSFVRDILAYFYGHLPGK----- 1209
P++ +++ + +E D D ++++ + + Y+ + + ++++L Y++ +
Sbjct: 1085 PIMDIMMSKCVELDRKDLLEKLIDQFQVPYRYYHDEKETTIKELLIYYFDSKMFQTSPDS 1144
Query: 1210 --LIVRILNVFDLSKIPFSESFPQHISSSNPVMCPP----LDYFATLLLGL 1254
L V++LN FD ++ F+ F Q++ + P DYF L+ L
Sbjct: 1145 KLLFVKLLN-FD-NETKFTSYFNQYLKTQKIEEFPNNDNYKDYFRELITPL 1193
>gi|290996810|ref|XP_002680975.1| predicted protein [Naegleria gruberi]
gi|284094597|gb|EFC48231.1| predicted protein [Naegleria gruberi]
Length = 1675
Score = 81.3 bits (199), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 182/874 (20%), Positives = 332/874 (37%), Gaps = 224/874 (25%)
Query: 645 LNNEQLQKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSS 704
LN + K+ +EW K + N+D+ + +++S +P+ + ++++L
Sbjct: 650 LNKDDQAHIKEFEEWRNTYGK-----NLYNLDEIGLKRLFLLSSYFTKPSSDFLIDFLKK 704
Query: 705 AGVTELFPGSNLPPNE----RLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIF---- 756
+ E PN+ L E +P+S+ N+ L L++ +F
Sbjct: 705 PDLVE---SIKTIPNDSGKIELFYPFEGKIVPLSV------NMILVLSVHARHRLFDSLC 755
Query: 757 --------------GG-----------QVVASIAMVETYTRLMLLAPHSL--FRSLFSHL 789
GG + A+VET +R + P ++ F+ L
Sbjct: 756 DSLKNLTPPQPKTDGGNSQPTTTDNFTEAYIPPAIVETLSRTLYCLPFAVNNFKDLLEGK 815
Query: 790 AQRNPSLLAKVGVTPLVLEIVNYRLLPLYRYQGKTK--TLMYDITKIISALKVKRGDHRV 847
+ N + LEI+N+RL+ RY G L +I I ++ HR+
Sbjct: 816 TRSN-------HCNYVFLEIINFRLMRYLRYFGGDIFFHLYIEIYLAIGNTTLENNHHRL 868
Query: 848 LRLAENLCMNLIL-----SQR--DFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIA 900
L EN C+ +L S+R FF + +ET R + A + K I
Sbjct: 869 YLLLENFCIKAMLYLITDSKRVVHFFDKNASKLPPEKISETFKRTLISACMKVFKLSPIK 928
Query: 901 DADHVLYLQTMLEQIMATSQHTWSE-----KTLRYFPSLLRDALIGRIDKRGLTIQAWQQ 955
++ + +L+++++ T E R +P ++ + + I +
Sbjct: 929 -LTNLDKSKKVLQRLVSVCGKTVEEFGKLTSKTRLYPDFIKTSF------ENIKITE-TE 980
Query: 956 AETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAW-----ILMQGHPENINSA 1010
A +TV Q P DP + + + LC W + + ENI +
Sbjct: 981 APSTVAQQKNDPKKPE-DPKEILKKVEN--------LCDSFWDKRDKVSTMKNLENIPHS 1031
Query: 1011 NLL------RVL-REFSPEEV----------------TSNIYTMVD-VLLHHIHVELQRG 1046
N L RV +EFS E+V ++Y M++ VL + E + G
Sbjct: 1032 NYLLCAIWSRVFEKEFSKEKVAFWKKWIPMLLPPRLLVDSVYKMINHVLDEFLSEENESG 1091
Query: 1047 HSLQDLLFK---ACANISFFVLTHELLPLDILLLALIDR--DDDP--------------- 1086
+ + K + ++ + E LPL+ + LALIDR ++DP
Sbjct: 1092 DQDESIFVKVKQVSSTLTKLIWEFEFLPLETVCLALIDRAKNEDPNLSNKPTEDSTEKKA 1151
Query: 1087 ----HALRIVITLLDRQELQQRVKLYC-MNRGPPEHWLYSGLFKRVELQKALGNHLSWKE 1141
+A I++ ++ + +RV L+ +NR P LF ++ H +
Sbjct: 1152 IEHKYAHNILLLIITDNQFSKRVDLFLDLNRNP-------NLF---DVNDNFTAHHKYHS 1201
Query: 1142 RY----------------PTFFDDIAARLLPVIPLIVYRLIENDAMDSADRVLATYSSFL 1185
+Y P+++++I R++P++ LI RL E + D ++L Y
Sbjct: 1202 QYPEGFGAMKTDDFLNANPSYYNNICLRMIPILDLICRRLCELNLFDFLRQILDKYGGLF 1261
Query: 1186 AYYPLRFSFVRDILAYFYGHLPGKLIVRILNV------FDLSKIPFSES------FPQHI 1233
AY+ +FV+++L Y Y LP ++ + + + LS + S S F +
Sbjct: 1262 AYHDYPMTFVKELLLY-YVDLPIEIKEMLFTIICKNEKYLLSDMDASFSAVAKSHFGISV 1320
Query: 1234 SSSNPV---------MCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSP 1284
SN + L YF TL+ ++ V+P + RA H
Sbjct: 1321 DDSNFIKKTGKTYIDQTFDLHYFLTLITN-ISEVLPTIQ-----------EPRANH---- 1364
Query: 1285 MTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQ 1344
+ P ++ FY+ + +L L +IE++ LP++ +I+S LV + IQ
Sbjct: 1365 --TYINPKHI------FYEFSNTF---ELRLNAGIIEVMCLPLTLQEIISKLVDCL--IQ 1411
Query: 1345 PTLIQTSNGPYGASNSVG------QGSVLPTSPS 1372
T + + + S + G PTSPS
Sbjct: 1412 NTSVCPPHQLFKCSYTTGLFLASLPNYSTPTSPS 1445
>gi|405964696|gb|EKC30149.1| Mediator of RNA polymerase II transcription subunit 23 [Crassostrea
gigas]
Length = 1034
Score = 80.9 bits (198), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 150/694 (21%), Positives = 284/694 (40%), Gaps = 133/694 (19%)
Query: 708 TELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVA 762
T L PG+ ++ PL MSLL +++ + L + + +
Sbjct: 197 TTLLPGN-------IVASAPTQPLAMSLLDSLTVHAKMSLIHSIVHRVIKQAKSKATIAQ 249
Query: 763 SIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LP 816
S A++ETY+RL++ + SL F ++Q P++ G+ +LE+ +YRL P
Sbjct: 250 SPALIETYSRLLVYMEIESLGIKGF--ISQLLPTVFTHNAWGILHTLLEMFSYRLHHTQP 307
Query: 817 LYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQ--RDFFSL 868
YR Q L+ + + + + + + LRL L + Q R F
Sbjct: 308 HYRIQ-----LLSHLHHLSQSPQTNQNQLQLCMESTALRLITGLGSFEVQPQLSRIFNEP 362
Query: 869 KREGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTL 928
R G S E +E LNR+ V+ +A + G+ D+ + + +L QIMA + H WS TL
Sbjct: 363 GRPGFLSNE-SEELNRVLVLTIARAMHVTGV-DSFSSTWPREILNQIMANTPHNWSPNTL 420
Query: 929 RYFPSLLRDALIG----RIDKRGL--TIQAWQQAETTVINQCTQLLSPSADPTYVKTYLS 982
FP L + R DK L ++A + T+ N+ + S +
Sbjct: 421 ANFPPSLAEFFQAQPQHRDDKNTLKRNVEAEYKKWKTMANENDIIAHFSMQGSSTV---- 476
Query: 983 HSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVE 1042
+LC W + I +VL P V++++ T D ++ +++
Sbjct: 477 --------FLCI-IWKNLLEENRGITPI-AYKVLDRLGPRSVSAHLRTFSDYIVSELNLN 526
Query: 1043 LQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHA----LRIVITLLDR 1098
G KA +++ V + ++ +D L+L L R+ D A L I + LL
Sbjct: 527 SAGGQHFH----KAIDSLNEMVWRYNIVTIDRLILCLALRNVDEDARLCYLLIHMLLLKP 582
Query: 1099 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------- 1143
Q+ + RV+ + + PEHWL + +K + H + E++
Sbjct: 583 QDFKSRVQEF-VKENSPEHWLQNNWH-----EKHMAFHRKYPEKFYFEGIQDLSSPIQHQ 636
Query: 1144 --PTFFDDIAARLLPVIPLIVYRLIENDAMDSA-----DRVLATYSSFLAYYPLRFSFVR 1196
P +F ++ R LPV+ ++++R++E ++ + +++L + ++ +++
Sbjct: 637 YLPVYFGNVCLRFLPVLDILLHRILEQPSLTTNNLNLFEKILESLGVLYKFHDHPITYLY 696
Query: 1197 DILAYFYGHL------PGKLIVRILNVFDL---SKIPFSESFPQHISSSNPVMCPPLDYF 1247
+ L Y++ L +L+ I N S +E + + + P LDY+
Sbjct: 697 NTLHYYHKILVQRAAYKRRLVTTIWNAHQEIRPSTWFLTEDYQRFSHEESLEWVPDLDYY 756
Query: 1248 ATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDP 1307
++ LV+ T+D KSP + ++ N+ P
Sbjct: 757 VRIIGRLVD--------------TIDG-------KSPFPN-----------CDWRFNEFP 784
Query: 1308 GTYTQLVLETAVIEILSLPVSASQIVSSLVQIVV 1341
G + T V E+++LPV + + +SL+ +V+
Sbjct: 785 GPAAHALYVTCV-ELMALPVPGNVVGNSLLDVVM 817
>gi|195121768|ref|XP_002005391.1| GI19099 [Drosophila mojavensis]
gi|193910459|gb|EDW09326.1| GI19099 [Drosophila mojavensis]
Length = 1422
Score = 77.0 bits (188), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 144/697 (20%), Positives = 280/697 (40%), Gaps = 104/697 (14%)
Query: 734 SLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQR 792
SL ++L QM +V + A++ETY RL++ SL + L Q
Sbjct: 530 SLTVHSKMSLIHSFVTQMLKQAQSKTLVPAPALIETYARLLVYTEIESL--GIKGFLTQL 587
Query: 793 NPSLLAKVGVTPL--VLEIVNYRLLPL---YRYQGKTKTLMYDITKIISALKVKRG-DHR 846
P++ L ++E+ +YRL + YR Q + + +++ +
Sbjct: 588 LPTVFKNHAWAMLHTLMEMFSYRLHHVPTHYRVQLLSLLYSLSSVPQTNKMQLNLCFEST 647
Query: 847 VLRLAENLCMNLILSQ-RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHV 905
LRL ++ SQ + + K G ++ +E LNR+ ++ LA + G D +
Sbjct: 648 ALRLITSIGSAEFQSQFSRYLNDKSPGGVASNESEELNRVLILTLARSMHVHGGGD-ELA 706
Query: 906 LYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCT 965
+ + L IM + H+W ++L FP L + + + ++ QQ + +V +
Sbjct: 707 GWCKDFLSNIMQHTPHSWPVQSLACFPHALNEYFL----QNNHPVENKQQLKKSVEEEYR 762
Query: 966 QLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVT 1025
S S + + ++ + + +LC I+ + E+I S ++L S ++
Sbjct: 763 NWTSMSNENDIIAHFIRPN--TNPLFLCLLFKIIWET--ESI-SPVAYKILEGISARALS 817
Query: 1026 SNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDD 1085
+++ D L+ E+ +D + K I+ + ++ +D L+L L R +
Sbjct: 818 THLRKFCDYLV----AEVASSSDGRDFIHKCVDTINNMIWKFNVVTIDRLVLCLALRTHE 873
Query: 1086 PHA-----LRIVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWK 1140
+ + I + LL EL+ RV+ +C + P +HW S +K L H ++
Sbjct: 874 GNEAQVCLITIQLLLLKASELRNRVQEFCKDNNP-DHWKQSNWH-----EKHLQFHQNYP 927
Query: 1141 ERY-----------PTFFDDIAARLLPVIPLIVYRLIE---NDAMDSADRVLATYSSFLA 1186
E++ P +F ++ R LPV+ ++V+R IE + +L S
Sbjct: 928 EKFAPDESASQIPLPVYFSNVCLRFLPVLDVVVHRFIELTIPNVHQILGIILDHLSILYK 987
Query: 1187 YYPLRFSFVRDILAYF----YGHLP--GKLIVRILNVFDL---SKIPFSESFPQHISSSN 1237
++ +++ + L Y+ LP KL+ I + F + SE + ++ S +
Sbjct: 988 FHDRPITYLYNTLHYYERILRDRLPLKKKLVSAITSAFSEIRPANWCVSEPYKVYLQSQD 1047
Query: 1238 PVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEG 1297
P+ P L Y+ L+ L + + G
Sbjct: 1048 PLWTPDLSYYMNLIRRLADTI-------------------------------------SG 1070
Query: 1298 RKEFYQ-----NQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSN 1352
+ FY N+ P T + T V E+L LP++ S + +++ ++V+ + Q
Sbjct: 1071 KNVFYTTDWRFNEFPNAPTHALYVTCV-ELLGLPLAPSVVAGNIIDVIVSGYAVIPQKEI 1129
Query: 1353 GPYGASNSVGQG-SVLPTSPSGGSTDSLGASRSTPSV 1388
Y N+VG + LP G D L +TP++
Sbjct: 1130 HSY--INAVGIVLAALPEPYWSGIYDRLQDMLNTPNM 1164
>gi|195346903|ref|XP_002039994.1| GM15969 [Drosophila sechellia]
gi|194135343|gb|EDW56859.1| GM15969 [Drosophila sechellia]
Length = 1440
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 144/677 (21%), Positives = 274/677 (40%), Gaps = 113/677 (16%)
Query: 758 GQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQRNPSLLAKVGVTPL--VLEIVNYRL 814
GQV A+ A++ETY RL++ SL + L+Q P++ L ++E+ +YRL
Sbjct: 559 GQVPAA-ALLETYARLLVYTEIESL--GIKGFLSQLMPTVFKNHAWAMLHTLMEMFSYRL 615
Query: 815 LPL---YRYQGKTKTLMYDITKIISALKVKRG-DHRVLRLAENLCMNLILSQ-RDFFSLK 869
+ YR Q + + +++ + LRL ++ Q +F+ K
Sbjct: 616 HHVPTHYRVQLLSLLHSLSSVPQTNKMQLNLCFESTALRLITSIGSAEFQPQFSRYFNDK 675
Query: 870 REGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLR 929
G ++ +E LNR+ ++ LA + G D + + + L I+ + H+W +L
Sbjct: 676 SPGAVASNESEELNRVLILTLARSMHVHGGGD-EMQGWCKDFLSNIIQHTPHSWPMHSLA 734
Query: 930 YFPSLLRDALIGR----IDKRGL--TIQAWQQAETTVINQ---CTQLLSPSADPTYVKTY 980
FP L + +K+ L ++ + T++ N+ L P+ +P +
Sbjct: 735 CFPPALNEYFTQNNQPPENKQQLKKAVEEEYRTWTSMTNENDIIAHFLRPTTNPLF---- 790
Query: 981 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 1040
LC I+ + ENI S ++L S +++++ D L+
Sbjct: 791 -----------LCLLFKIIWET--ENI-SPVAYKILEGISARALSTHLRKFCDYLV---- 832
Query: 1041 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHA-----LRIVITL 1095
E+ +D + K I+ + ++ +D ++L L R + + L I + L
Sbjct: 833 AEVASSSDGRDFIHKCVDTINNMIWKFNVVTIDRVVLCLALRTHEGNEAQVCFLIIQLLL 892
Query: 1096 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-----------P 1144
L EL+ RV+ +C + P +HW S K L H + E++ P
Sbjct: 893 LKASELRNRVQEFCKDNNP-DHWKQSNW-----QDKHLSFHQKYPEKFALDESASQIPLP 946
Query: 1145 TFFDDIAARLLPVIPLIVYRLIE---NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAY 1201
+F ++ R LPV+ ++V+R IE + +L S ++ +++ + L Y
Sbjct: 947 VYFSNVCLRFLPVLDVVVHRFIELTITNVHQILGFILDHLSILYKFHDRPITYLYNTLHY 1006
Query: 1202 FYG------HLPGKLIVRILNVFDLSKIP---FSESFPQHISSSNPVMCPPLDYFATLLL 1252
+ L KL+ I + F + P SE + ++ S + + P L Y+ +L+
Sbjct: 1007 YERILRDRPALKKKLVGAITSAFSEIRPPNWSVSEPYKVYLQSQDSLWTPELSYYMSLIR 1066
Query: 1253 GLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1312
L + + SG + S N+ P + P++
Sbjct: 1067 RLADTI---------SGKNVFYSTDWRFNEFP----NAPTH------------------- 1094
Query: 1313 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQG-SVLPTSP 1371
L +E+L LPV+ + S+L+ ++V+ + Q Y N+VG + LP
Sbjct: 1095 -ALYVTCVELLGLPVAPPLVASNLIDVIVSGYAVIPQKDIHSY--INAVGIVLAALPEPY 1151
Query: 1372 SGGSTDSLGASRSTPSV 1388
G D L +TP++
Sbjct: 1152 WSGIYDRLQDMLNTPNM 1168
>gi|221330570|ref|NP_001137741.1| mediator complex subunit 23, isoform B [Drosophila melanogaster]
gi|220902353|gb|ACL83195.1| mediator complex subunit 23, isoform B [Drosophila melanogaster]
Length = 1441
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 144/677 (21%), Positives = 274/677 (40%), Gaps = 113/677 (16%)
Query: 758 GQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQRNPSLLAKVGVTPL--VLEIVNYRL 814
GQV A+ A++ETY RL++ SL + L+Q P++ L ++E+ +YRL
Sbjct: 561 GQVPAA-ALLETYARLLVYTEIESL--GIKGFLSQLMPTVFKNHAWAMLHTLMEMFSYRL 617
Query: 815 LPL---YRYQGKTKTLMYDITKIISALKVKRG-DHRVLRLAENLCMNLILSQ-RDFFSLK 869
+ YR Q + + +++ + LRL ++ Q +F+ K
Sbjct: 618 HHVPTHYRVQLLSLLHSLSSVPQTNKMQLNLCFESTALRLITSIGSAEFQPQFSRYFNDK 677
Query: 870 REGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLR 929
G ++ +E LNR+ ++ LA + G D + + + L I+ + H+W +L
Sbjct: 678 SPGAVASNESEELNRVLILTLARSMHVHGGGD-EMQGWCKDFLSNIIQHTPHSWPMHSLA 736
Query: 930 YFPSLLRDALIGR----IDKRGL--TIQAWQQAETTVINQ---CTQLLSPSADPTYVKTY 980
FP L + +K+ L ++ + T++ N+ L P+ +P +
Sbjct: 737 CFPPALNEYFTQNNQPPENKQQLKKAVEEEYRTWTSMTNENDIIAHFLRPTTNPLF---- 792
Query: 981 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 1040
LC I+ + ENI S ++L S +++++ D L+
Sbjct: 793 -----------LCLLFKIIWET--ENI-SPVAYKILEGISARALSTHLRKFCDYLV---- 834
Query: 1041 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHA-----LRIVITL 1095
E+ +D + K I+ + ++ +D ++L L R + + L I + L
Sbjct: 835 AEVASSSDGRDFIHKCVDTINNMIWKFNVVTIDRVVLCLALRTHEGNEAQVCFLIIQLLL 894
Query: 1096 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-----------P 1144
L EL+ RV+ +C + P +HW S K L H + E++ P
Sbjct: 895 LKASELRNRVQEFCKDNNP-DHWKQSNW-----QDKHLSFHQKYPEKFALDESASQIPLP 948
Query: 1145 TFFDDIAARLLPVIPLIVYRLIE---NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAY 1201
+F ++ R LPV+ ++V+R IE + +L S ++ +++ + L Y
Sbjct: 949 VYFSNVCLRFLPVLDVVVHRFIELTITNVHQILGFILDHLSILYKFHDRPITYLYNTLHY 1008
Query: 1202 FYG------HLPGKLIVRILNVFDLSKIP---FSESFPQHISSSNPVMCPPLDYFATLLL 1252
+ L KL+ I + F + P SE + ++ S + + P L Y+ +L+
Sbjct: 1009 YERILRDRPALKKKLVGAITSAFSEIRPPNWSVSEPYKVYLQSQDSLWTPELSYYMSLIR 1068
Query: 1253 GLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1312
L + + SG + S N+ P + P++
Sbjct: 1069 RLADTI---------SGKNVFYSTDWRFNEFP----NAPTH------------------- 1096
Query: 1313 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQG-SVLPTSP 1371
L +E+L LPV+ + S+L+ ++V+ + Q Y N+VG + LP
Sbjct: 1097 -ALYVTCVELLGLPVAPPLVASNLIDVIVSGYAVIPQKDIHSY--INAVGIVLAALPEPY 1153
Query: 1372 SGGSTDSLGASRSTPSV 1388
G D L +TP++
Sbjct: 1154 WSGIYDRLQDMLNTPNM 1170
>gi|19922780|ref|NP_611735.1| mediator complex subunit 23, isoform A [Drosophila melanogaster]
gi|74872254|sp|Q9W1X7.1|MED23_DROME RecName: Full=Mediator of RNA polymerase II transcription subunit 23;
AltName: Full=Mediator complex subunit 23; AltName:
Full=dSUR2; AltName: Full=dTRAP150
gi|7291500|gb|AAF46925.1| mediator complex subunit 23, isoform A [Drosophila melanogaster]
Length = 1439
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 144/677 (21%), Positives = 274/677 (40%), Gaps = 113/677 (16%)
Query: 758 GQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQRNPSLLAKVGVTPL--VLEIVNYRL 814
GQV A+ A++ETY RL++ SL + L+Q P++ L ++E+ +YRL
Sbjct: 559 GQVPAA-ALLETYARLLVYTEIESL--GIKGFLSQLMPTVFKNHAWAMLHTLMEMFSYRL 615
Query: 815 LPL---YRYQGKTKTLMYDITKIISALKVKRG-DHRVLRLAENLCMNLILSQ-RDFFSLK 869
+ YR Q + + +++ + LRL ++ Q +F+ K
Sbjct: 616 HHVPTHYRVQLLSLLHSLSSVPQTNKMQLNLCFESTALRLITSIGSAEFQPQFSRYFNDK 675
Query: 870 REGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLR 929
G ++ +E LNR+ ++ LA + G D + + + L I+ + H+W +L
Sbjct: 676 SPGAVASNESEELNRVLILTLARSMHVHGGGD-EMQGWCKDFLSNIIQHTPHSWPMHSLA 734
Query: 930 YFPSLLRDALIGR----IDKRGL--TIQAWQQAETTVINQ---CTQLLSPSADPTYVKTY 980
FP L + +K+ L ++ + T++ N+ L P+ +P +
Sbjct: 735 CFPPALNEYFTQNNQPPENKQQLKKAVEEEYRTWTSMTNENDIIAHFLRPTTNPLF---- 790
Query: 981 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 1040
LC I+ + ENI S ++L S +++++ D L+
Sbjct: 791 -----------LCLLFKIIWET--ENI-SPVAYKILEGISARALSTHLRKFCDYLV---- 832
Query: 1041 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHA-----LRIVITL 1095
E+ +D + K I+ + ++ +D ++L L R + + L I + L
Sbjct: 833 AEVASSSDGRDFIHKCVDTINNMIWKFNVVTIDRVVLCLALRTHEGNEAQVCFLIIQLLL 892
Query: 1096 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-----------P 1144
L EL+ RV+ +C + P +HW S K L H + E++ P
Sbjct: 893 LKASELRNRVQEFCKDNNP-DHWKQSNW-----QDKHLSFHQKYPEKFALDESASQIPLP 946
Query: 1145 TFFDDIAARLLPVIPLIVYRLIE---NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAY 1201
+F ++ R LPV+ ++V+R IE + +L S ++ +++ + L Y
Sbjct: 947 VYFSNVCLRFLPVLDVVVHRFIELTITNVHQILGFILDHLSILYKFHDRPITYLYNTLHY 1006
Query: 1202 FYG------HLPGKLIVRILNVFDLSKIP---FSESFPQHISSSNPVMCPPLDYFATLLL 1252
+ L KL+ I + F + P SE + ++ S + + P L Y+ +L+
Sbjct: 1007 YERILRDRPALKKKLVGAITSAFSEIRPPNWSVSEPYKVYLQSQDSLWTPELSYYMSLIR 1066
Query: 1253 GLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1312
L + + SG + S N+ P + P++
Sbjct: 1067 RLADTI---------SGKNVFYSTDWRFNEFP----NAPTH------------------- 1094
Query: 1313 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQG-SVLPTSP 1371
L +E+L LPV+ + S+L+ ++V+ + Q Y N+VG + LP
Sbjct: 1095 -ALYVTCVELLGLPVAPPLVASNLIDVIVSGYAVIPQKDIHSY--INAVGIVLAALPEPY 1151
Query: 1372 SGGSTDSLGASRSTPSV 1388
G D L +TP++
Sbjct: 1152 WSGIYDRLQDMLNTPNM 1168
>gi|124248376|gb|ABM92808.1| IP14638p [Drosophila melanogaster]
Length = 1442
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 144/677 (21%), Positives = 274/677 (40%), Gaps = 113/677 (16%)
Query: 758 GQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQRNPSLLAKVGVTPL--VLEIVNYRL 814
GQV A+ A++ETY RL++ SL + L+Q P++ L ++E+ +YRL
Sbjct: 561 GQVPAA-ALLETYARLLVYTEIESL--GIKGFLSQLMPTVFKNHAWAMLHTLMEMFSYRL 617
Query: 815 LPL---YRYQGKTKTLMYDITKIISALKVKRG-DHRVLRLAENLCMNLILSQ-RDFFSLK 869
+ YR Q + + +++ + LRL ++ Q +F+ K
Sbjct: 618 HHVPTHYRVQLLSLLHSLSSVPQTNKMQLNLCFESTALRLITSIGSAEFQPQFSRYFNDK 677
Query: 870 REGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLR 929
G ++ +E LNR+ ++ LA + G D + + + L I+ + H+W +L
Sbjct: 678 SPGAVASNESEELNRVLILTLARSMHVHGGGD-EMQGWCKDFLSNIIQHTPHSWPMHSLA 736
Query: 930 YFPSLLRDALIGR----IDKRGL--TIQAWQQAETTVINQ---CTQLLSPSADPTYVKTY 980
FP L + +K+ L ++ + T++ N+ L P+ +P +
Sbjct: 737 CFPPALNEYFTQNNQPPENKQQLKKAVEEEYRTWTSMTNENDIIAHFLRPTTNPLF---- 792
Query: 981 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 1040
LC I+ + ENI S ++L S +++++ D L+
Sbjct: 793 -----------LCLLFKIIWET--ENI-SPVAYKILEGISARALSTHLRKFCDYLV---- 834
Query: 1041 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHA-----LRIVITL 1095
E+ +D + K I+ + ++ +D ++L L R + + L I + L
Sbjct: 835 AEVASSSDGRDFIHKCVDTINNMIWKFNVVTIDRVVLCLALRTHEGNEAQVCFLIIQLLL 894
Query: 1096 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-----------P 1144
L EL+ RV+ +C + P +HW S K L H + E++ P
Sbjct: 895 LKASELRNRVQEFCKDNNP-DHWKQSNW-----QDKHLSFHQKYPEKFALDESASQIPLP 948
Query: 1145 TFFDDIAARLLPVIPLIVYRLIE---NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAY 1201
+F ++ R LPV+ ++V+R IE + +L S ++ +++ + L Y
Sbjct: 949 VYFSNVCLRFLPVLDVVVHRFIELTITNVHQILGFILDHLSILYKFHDRPITYLYNTLHY 1008
Query: 1202 FYG------HLPGKLIVRILNVFDLSKIP---FSESFPQHISSSNPVMCPPLDYFATLLL 1252
+ L KL+ I + F + P SE + ++ S + + P L Y+ +L+
Sbjct: 1009 YERILRDRPALKKKLVGAITSAFSEIRPPNWSVSEPYKVYLQSQDSLWTPELSYYMSLIR 1068
Query: 1253 GLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1312
L + + SG + S N+ P + P++
Sbjct: 1069 RLADTI---------SGKNVFYSTDWRFNEFP----NAPTH------------------- 1096
Query: 1313 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQG-SVLPTSP 1371
L +E+L LPV+ + S+L+ ++V+ + Q Y N+VG + LP
Sbjct: 1097 -ALYVTCVELLGLPVAPPLVASNLIDVIVSGYAVIPQKDIHSY--INAVGIVLAALPEPY 1153
Query: 1372 SGGSTDSLGASRSTPSV 1388
G D L +TP++
Sbjct: 1154 WSGIYDRLQDMLNTPNM 1170
>gi|195585861|ref|XP_002082697.1| GD11721 [Drosophila simulans]
gi|194194706|gb|EDX08282.1| GD11721 [Drosophila simulans]
Length = 1444
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 144/677 (21%), Positives = 274/677 (40%), Gaps = 113/677 (16%)
Query: 758 GQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQRNPSLLAKVGVTPL--VLEIVNYRL 814
GQV A+ A++ETY RL++ SL + L+Q P++ L ++E+ +YRL
Sbjct: 559 GQVPAA-ALLETYARLLVYTEIESL--GIKGFLSQLMPTVFKNHAWAMLHTLMEMFSYRL 615
Query: 815 LPL---YRYQGKTKTLMYDITKIISALKVKRG-DHRVLRLAENLCMNLILSQ-RDFFSLK 869
+ YR Q + + +++ + LRL ++ Q +F+ K
Sbjct: 616 HHVPTHYRVQLLSLLHSLSSVPQTNKMQLNLCFESTALRLITSIGSAEFQPQFSRYFNDK 675
Query: 870 REGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLR 929
G ++ +E LNR+ ++ LA + G D + + + L I+ + H+W +L
Sbjct: 676 SPGAVASNESEELNRVLILTLARSMHVHGGGD-EMQGWCKDFLSNIIQHTPHSWPMHSLA 734
Query: 930 YFPSLLRDALIGR----IDKRGL--TIQAWQQAETTVINQ---CTQLLSPSADPTYVKTY 980
FP L + +K+ L ++ + T++ N+ L P+ +P +
Sbjct: 735 CFPPALNEYFTQNNQPPENKQQLKKAVEEEYRTWTSMTNENDIIAHFLRPTTNPLF---- 790
Query: 981 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 1040
LC I+ + ENI S ++L S +++++ D L+
Sbjct: 791 -----------LCLLFKIIWET--ENI-SPVAYKILEGISARALSTHLRKFCDYLV---- 832
Query: 1041 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHA-----LRIVITL 1095
E+ +D + K I+ + ++ +D ++L L R + + L I + L
Sbjct: 833 AEVASSSDGRDFIHKCVDTINNMIWKFNVVTIDRVVLCLALRTHEGNEAQVCFLIIQLLL 892
Query: 1096 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-----------P 1144
L EL+ RV+ +C + P +HW S K L H + E++ P
Sbjct: 893 LKASELRNRVQEFCKDNNP-DHWKQSNW-----QDKHLSFHQKYPEKFALDESASQIPLP 946
Query: 1145 TFFDDIAARLLPVIPLIVYRLIE---NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAY 1201
+F ++ R LPV+ ++V+R IE + +L S ++ +++ + L Y
Sbjct: 947 VYFSNVCLRFLPVLDVVVHRFIELTITNVHQILGFILDHLSILYKFHDRPITYLYNTLHY 1006
Query: 1202 FYG------HLPGKLIVRILNVFDLSKIP---FSESFPQHISSSNPVMCPPLDYFATLLL 1252
+ L KL+ I + F + P SE + ++ S + + P L Y+ +L+
Sbjct: 1007 YERILRDRPALKKKLVGAITSAFSEIRPPNWSVSEPYKVYLQSQDSLWTPELSYYMSLIR 1066
Query: 1253 GLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1312
L + + SG + S N+ P + P++
Sbjct: 1067 RLADTI---------SGKNVFYSTDWRFNEFP----NAPTH------------------- 1094
Query: 1313 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQG-SVLPTSP 1371
L +E+L LPV+ + S+L+ ++V+ + Q Y N+VG + LP
Sbjct: 1095 -ALYVTCVELLGLPVAPPLVASNLIDVIVSGYAVIPQKDIHSY--INAVGIVLAALPEPY 1151
Query: 1372 SGGSTDSLGASRSTPSV 1388
G D L +TP++
Sbjct: 1152 WSGIYDRLQDMLNTPNM 1168
>gi|194757114|ref|XP_001960810.1| GF13553 [Drosophila ananassae]
gi|190622108|gb|EDV37632.1| GF13553 [Drosophila ananassae]
Length = 1414
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 143/677 (21%), Positives = 277/677 (40%), Gaps = 113/677 (16%)
Query: 758 GQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQRNPSLLAKVGVTPL--VLEIVNYRL 814
GQV A+ A++ETY RL++ SL + L+Q P++ L ++E+ +YRL
Sbjct: 561 GQVPAA-ALLETYARLLVYTEIESL--GIKGFLSQLMPTVFKNQAWAMLHTLMEMFSYRL 617
Query: 815 --LPL-YRYQGKTKTLMYDITKIISALKVKRG-DHRVLRLAENLCMNLILSQ-RDFFSLK 869
+P YR Q + + +++ + LRL ++ Q +F+ K
Sbjct: 618 HHVPTHYRVQLLSLLHSLSSVPQTNKMQLNLCFESTALRLITSIGSAEFQPQFSRYFNDK 677
Query: 870 REGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLR 929
G ++ +E LNR+ ++ LA + G D + + L IM + H+W ++L
Sbjct: 678 SPGAVASNESEELNRVLILTLARSMHVHGGGDEMQS-WCKDFLSNIMQHTPHSWPMQSLA 736
Query: 930 YFPSLLRDALIGR----IDKRGL--TIQAWQQAETTVINQ---CTQLLSPSADPTYVKTY 980
FP L + +K+ L +++ + T++ N+ L P+ +P +
Sbjct: 737 CFPPALNEYFTQNNQPAENKQQLKKSVEEEYRTWTSMTNENDIIAHFLRPTTNPLF---- 792
Query: 981 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 1040
LC I+ + ENI S ++L S +++++ D L+
Sbjct: 793 -----------LCLLFKIIWET--ENI-SPVAYKILEGISARALSTHLRKFCDYLV---- 834
Query: 1041 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHA-----LRIVITL 1095
E+ +D + K I+ + ++ +D ++L L R + + L I + L
Sbjct: 835 AEVASSSDGRDFIHKCVDTINNMIWKFNVVTIDRVVLCLALRTHEGNEAQVCFLIIQLLL 894
Query: 1096 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-----------P 1144
L EL+ RV+ +C + P +HW S K L H + E++ P
Sbjct: 895 LKASELRNRVQEFCKDNNP-DHWKQSNW-----QDKHLSFHQKYPEKFALDESASQIPLP 948
Query: 1145 TFFDDIAARLLPVIPLIVYRLIE---NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAY 1201
+F ++ R LPV+ ++V+R IE + +L S ++ +++ + L Y
Sbjct: 949 VYFSNVCLRFLPVLDVVVHRFIELTIPNVHQILGFILDHLSILYKFHDRPITYLYNTLHY 1008
Query: 1202 FYG------HLPGKLIVRILNVFDLSKIP---FSESFPQHISSSNPVMCPPLDYFATLLL 1252
+ L KL+ I + F + P SE + + + + + P L Y+ +L+
Sbjct: 1009 YERILRDRPSLKKKLVSAITSAFSEIRPPNWSVSEPYKVFLQNQDLLWTPELSYYMSLIR 1068
Query: 1253 GLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1312
L + + SG + S N+ P + P++
Sbjct: 1069 RLADTI---------SGKNVFYSTDWRFNEFP----NAPTH------------------- 1096
Query: 1313 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQG-SVLPTSP 1371
L +E+L LPV+ + + ++++ ++V+ + Q +G N+VG + LP
Sbjct: 1097 -ALYVTCVELLGLPVAPALVANNIIDVIVSGYAVIPQKE--IHGYINAVGIVLAALPEPY 1153
Query: 1372 SGGSTDSLGASRSTPSV 1388
G D L +TP++
Sbjct: 1154 WSGIYDRLQDMLNTPNM 1170
>gi|195488939|ref|XP_002092526.1| GE14246 [Drosophila yakuba]
gi|194178627|gb|EDW92238.1| GE14246 [Drosophila yakuba]
Length = 1451
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 145/678 (21%), Positives = 276/678 (40%), Gaps = 115/678 (16%)
Query: 758 GQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQRNPSLLAKVGVTPL--VLEIVNYRL 814
GQV A+ A++ETY RL++ SL + L+Q P++ L ++E+ +YRL
Sbjct: 559 GQVPAA-ALLETYARLLVYTEIESL--GIKGFLSQLMPTVFKHHAWAMLHTLMEMFSYRL 615
Query: 815 LPL---YRYQGKTKTLMYDITKIISALKVKRG-DHRVLRLAENLCMNLILSQ-RDFFSLK 869
+ YR Q + + +++ + LRL ++ Q +F+ K
Sbjct: 616 HHVPTHYRVQLLSLLHSLSSVPQTNKMQLNLCFESTALRLITSIGSAEFQPQFSRYFNDK 675
Query: 870 REGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLR 929
G ++ +E LNR+ ++ LA + G D + + + L I+ + H+W +L
Sbjct: 676 SPGAVASNESEELNRVLILTLARSMHVHGGGD-EMQGWCKDFLSNIIQHTPHSWPMHSLA 734
Query: 930 YFPSLLRDALIGR----IDKRGL--TIQAWQQAETTVINQ---CTQLLSPSADPTYVKTY 980
FP L + +K+ L ++ + T++ N+ L P+ +P +
Sbjct: 735 CFPPALNEYFTQNNQPTENKQQLKKAVEEEYRTWTSMTNENDIIAHFLRPTTNPLF---- 790
Query: 981 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 1040
LC I+ + ENI S ++L S +++++ D L+
Sbjct: 791 -----------LCLLFKIIWET--ENI-SPVAYKILEGISARALSTHLRKFCDYLV---- 832
Query: 1041 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHA-----LRIVITL 1095
E+ +D + K I+ + ++ +D ++L L R + + L I + L
Sbjct: 833 AEVASSSDGRDFIHKCVDTINNMIWKFNVVTIDRVVLCLALRTHEGNEAQVCFLIIQLLL 892
Query: 1096 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQ-KALGNHLSWKERY----------- 1143
L EL+ RV+ +C + P +HW K+ Q K L H + E++
Sbjct: 893 LKASELRNRVQEFCKDNNP-DHW------KQNNWQDKHLSFHQKYPEKFALDESASQIPL 945
Query: 1144 PTFFDDIAARLLPVIPLIVYRLIE---NDAMDSADRVLATYSSFLAYYPLRFSFVRDILA 1200
P +F ++ R LPV+ ++V+R IE + +L S ++ +++ + L
Sbjct: 946 PVYFSNVCLRFLPVLDVVVHRFIELTITNVHQILGFILDHLSILYKFHDRPITYLYNTLH 1005
Query: 1201 YFYG------HLPGKLIVRILNVFDLSKIP---FSESFPQHISSSNPVMCPPLDYFATLL 1251
Y+ L KL+ I + F + P SE + ++ S + + P L Y+ +L+
Sbjct: 1006 YYERILRDRPALKKKLVGAITSAFSEIRPPNWSVSEPYKVYLQSQDSLWTPELSYYMSLI 1065
Query: 1252 LGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYT 1311
L + + SG + S N+ P + P++
Sbjct: 1066 RRLADTI---------SGKNVFYSTDWRFNEFP----NAPTH------------------ 1094
Query: 1312 QLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQG-SVLPTS 1370
L +E+L LPV+ + S+L+ ++V+ + Q Y N+VG + LP
Sbjct: 1095 --ALYVTCVELLGLPVAPPLVASNLIDVIVSGYAVIPQKDIHSY--INAVGIVLAALPEP 1150
Query: 1371 PSGGSTDSLGASRSTPSV 1388
G D L +TP++
Sbjct: 1151 YWSGIYDRLQDMLNTPNM 1168
>gi|195426385|ref|XP_002061315.1| GK20791 [Drosophila willistoni]
gi|194157400|gb|EDW72301.1| GK20791 [Drosophila willistoni]
Length = 1413
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 146/701 (20%), Positives = 280/701 (39%), Gaps = 112/701 (15%)
Query: 734 SLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQR 792
SL ++L QM V + A++ETY RL++ SL + L+Q
Sbjct: 536 SLTVHSKMSLIHSFVTQMLKQAQNKSQVPAAALLETYARLLVYTEIESL--GIKGFLSQL 593
Query: 793 NPSLLAKVGVTPL--VLEIVNYRLLPL---YRYQGKTKTLMYDITKIISALKVKRG-DHR 846
P++ L ++E+ +YRL + YR Q + + +++ +
Sbjct: 594 MPTVFKNHAWAMLHTLMEMFSYRLHHVPTHYRVQLLSLLHSLSSLPQTNKMQLNLCFEST 653
Query: 847 VLRLAENLCMNLILSQ-RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHV 905
LRL ++ Q +F+ K G ++ +E LNR+ ++ LA + G D
Sbjct: 654 ALRLITSISSAEFQPQFSRYFNEKSPGAVASNESEELNRVLILTLARSMHVHGGGDELQG 713
Query: 906 LYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGR----IDKRGL--TIQAWQQAETT 959
+ + L IM + H+W ++L FP L + +K+ L +++ + T+
Sbjct: 714 -WCKDFLSNIMQHTPHSWPLQSLTCFPPALNEYFAQNNQPSENKQVLKKSVEEEYRMWTS 772
Query: 960 VINQ---CTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVL 1016
+ N+ L P+A+P + LC I+ + ENI S ++L
Sbjct: 773 MSNENDIIAHFLRPNANPLF---------------LCLLFKIIWET--ENI-SPVAYKIL 814
Query: 1017 REFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILL 1076
+ S +++ + D L+ VE+ +D + K I+ + ++ +D ++
Sbjct: 815 EQISARALSTLLRKFCDYLV----VEVASFSDGRDFIHKCVDTINNMIWKFNVVTIDRVV 870
Query: 1077 LALIDRDDDPHA-----LRIVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQK 1131
L L R + + L I + LL EL+ RV+ +C + P +HW S K
Sbjct: 871 LCLALRTHEGNEAQVCFLIIQLLLLKASELRNRVQEFCKDNNP-DHWKQSNW-----QDK 924
Query: 1132 ALGNHLSWKERY-----------PTFFDDIAARLLPVIPLIVYRLIE---NDAMDSADRV 1177
L H + E++ P +F ++ R LPV+ ++V+R IE + +
Sbjct: 925 HLSFHQKYPEKFALDESASQIPLPVYFSNVCLRFLPVLDVVVHRFIELTIPNVHQILGYI 984
Query: 1178 LATYSSFLAYYPLRFSFVRDILAYFYG------HLPGKLIVRILNVFDLSKIP---FSES 1228
L S ++ +++ + L Y+ L KL+ I + F + P +E
Sbjct: 985 LDHLSILYKFHDRPITYLYNTLHYYERILRDRPSLKKKLVSTITSAFSEIRPPNWSITEP 1044
Query: 1229 FPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQ 1288
+ + + + + P L Y+ L+ L + + SG + + N+ P
Sbjct: 1045 YKVFLQNQDLLWTPELGYYMNLIRRLADTI---------SGKNVFYTTDWRFNEFP---- 1091
Query: 1289 SGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLI 1348
+ P++ L +E+L LPV+ S + ++++ ++VN +
Sbjct: 1092 NAPAH--------------------ALYVTCVELLGLPVAPSLVANNIIDVIVNGYAVIP 1131
Query: 1349 QTSNGPYGASNSVGQG-SVLPTSPSGGSTDSLGASRSTPSV 1388
Q Y N+VG + LP G D L +TP++
Sbjct: 1132 QKEIHSY--INAVGIVLAALPEPYWSGIYDRLQDMLNTPNM 1170
>gi|432946135|ref|XP_004083785.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like isoform 2 [Oryzias latipes]
Length = 1395
Score = 73.6 bits (179), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 241/1182 (20%), Positives = 448/1182 (37%), Gaps = 228/1182 (19%)
Query: 505 MISEAVIDRIVELLKLTNSEVNCWHD--------WLIFSDVFFFLVKSGCIDFVDFVDKL 556
++ E ++D +V ++ + +E + D W S F V F V L
Sbjct: 305 VLEEQLVDLVVYAMERSETEEHFDADVGGTSQLLWQHLSSQLIFFVLFQFASFPHMVLSL 364
Query: 557 VSRLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRKILSFHREDRCT--- 613
+L G I +H+ W+L Q I + AL +D V +L + E C
Sbjct: 365 HQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL-ADFLPVMKLFDLL--YPEKECIPVP 420
Query: 614 DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ----KGKQIDEWWRQVSKGDRM 669
D N PQS F +C IW ++ + + +N +LQ ++ + Q S ++
Sbjct: 421 DINKPQSTH-SFAMTC----IW-IHLNRKAQSDNSKLQIPIPHSLKLHHEFLQQSLRNKT 474
Query: 670 MDYMNMDDRSVGMFWVVSYTMAQ----PACETVMNWLSSAGVTELFPGSNLPPNERLMVM 725
+ M D + + T ++ P V +A V PG+N M
Sbjct: 475 L---GMSDYKIALLCNAYSTNSECFTLPMGVLVETIYGNASVRTSLPGTNC------MAS 525
Query: 726 REVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTRLML-LAPH 779
V PLPM+LL +++ + L + + + + A+VETY+RL++ +
Sbjct: 526 GSVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSIALAPALVETYSRLLVYMEIE 585
Query: 780 SLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKI 834
SL F ++Q P++ G+ +LE+ +YR+ P YR Q ++ +
Sbjct: 586 SLGIKGF--ISQLLPNVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQL--------LSHL 635
Query: 835 ISALKVKRGDHRVLRLA-ENLCMNLILS------QRDFFSLKREGKG--STEFTETLNRI 885
S V + + L L E+ + LI + Q F + K S E +E LNR
Sbjct: 636 HSLAAVPQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFLNDPKTVLSAE-SEELNRA 694
Query: 886 TVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGR 942
++ LA +D+ H + + +L IM+ + H W+ TL FP+ L+
Sbjct: 695 LILTLARATHVTDFFTGSDSIHGTWCKDILHTIMSFTPHNWASHTLSCFPAPLQ----AF 750
Query: 943 IDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQG 1002
+ + ++ + V + + S + + + + P +LC +L++
Sbjct: 751 FKQNNVPQESRFNLKKNVEEEYRKWKSMAIENDIITHFSMQGSPP--LFLCLLWKMLLET 808
Query: 1003 HPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANI-S 1061
++IN RVL + +++ T D L++ E Q L C I +
Sbjct: 809 --DHINQIG-FRVLERIGARALVAHVRTFADFLVY----EFSTSAGGQQL--NKCIEILN 859
Query: 1062 FFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCMNRGPPE 1116
V + ++ LD L+L L R + + ++ + LL + + RV + + PE
Sbjct: 860 DMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVSDF-VKENSPE 918
Query: 1117 HWLYSGLF-KRVELQKALGNHLSWK--------------ERYPTFFDDIAARLLPVIPLI 1161
HWL S K + K L ++ + P +F ++ R LPV ++
Sbjct: 919 HWLQSDWHSKHMNYHKKYPEKLYFEGLADQVNPPIQQQPQYLPIYFGNVCLRFLPVFDIV 978
Query: 1162 VYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGH------LPGKLIVRI 1214
++R +E S + +L ++ +++ + L Y+ H L KL+ I
Sbjct: 979 IHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYERHLRDRTNLKRKLVHAI 1038
Query: 1215 LNVFDLSKIP---FSESFPQ--HISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSG 1269
++ ++ P SE++ + + + V P Y+ L+ LV+ +
Sbjct: 1039 MSSLKDNRTPGWGLSETYMKCGMNAREDNVWIPDDTYYCKLIGRLVDTMA---------- 1088
Query: 1270 STMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSA 1329
K+P GP + R F + +P + L +E+++L V
Sbjct: 1089 -----------GKTP-----GPFPNCDWR--FNEFPNPAAHA---LHVTCVELMALAVPG 1127
Query: 1330 SQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQG-SVLPTSPSGGSTDSLGASRSTPSV 1388
+ ++L+ +V+ QP + + S + N++G + LP D + V
Sbjct: 1128 KDVGNALLNVVLKSQPLVPRESITAW--MNAIGLVITALPEPYWVVLHDRI--------V 1177
Query: 1389 SGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESWWLADGK 1448
S I++ + S + + + L AC
Sbjct: 1178 SVISSPALTSETDWVGYPFALLDFTAC--------------------------------H 1205
Query: 1449 RSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLRP 1508
+S E++ + AL W ++IG + +L F S + L+P
Sbjct: 1206 QSYSEMNCSYVLALAHAVWH-----HSSIGQL-SLTPKFLSEV--------------LKP 1245
Query: 1509 ITSVAM-LRIVFRIMGPLLPRLVNAHTLFNKTLALLLNTMGDVYGKNTLPPAPVEASEIA 1567
I L V+ ++GP L R T + + M +N S +
Sbjct: 1246 IVQTEFQLLYVYHLVGPFLQRFQQERTRCMLEIGVAFYEMLQAVDQNC-----QHLSYMD 1300
Query: 1568 DLIDFLHHVVH-YEGQGGPVQASSKPRPEVLVLTGRAAESLR 1608
+ DFL+H+ + Y G S K + E +++T R A LR
Sbjct: 1301 PICDFLYHIKYMYTGD------SVKEQVEKIIMTLRPAMKLR 1336
>gi|432946133|ref|XP_004083784.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like isoform 1 [Oryzias latipes]
Length = 1389
Score = 73.6 bits (179), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 241/1182 (20%), Positives = 448/1182 (37%), Gaps = 228/1182 (19%)
Query: 505 MISEAVIDRIVELLKLTNSEVNCWHD--------WLIFSDVFFFLVKSGCIDFVDFVDKL 556
++ E ++D +V ++ + +E + D W S F V F V L
Sbjct: 299 VLEEQLVDLVVYAMERSETEEHFDADVGGTSQLLWQHLSSQLIFFVLFQFASFPHMVLSL 358
Query: 557 VSRLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRKILSFHREDRCT--- 613
+L G I +H+ W+L Q I + AL +D V +L + E C
Sbjct: 359 HQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL-ADFLPVMKLFDLL--YPEKECIPVP 414
Query: 614 DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ----KGKQIDEWWRQVSKGDRM 669
D N PQS F +C IW ++ + + +N +LQ ++ + Q S ++
Sbjct: 415 DINKPQSTH-SFAMTC----IW-IHLNRKAQSDNSKLQIPIPHSLKLHHEFLQQSLRNKT 468
Query: 670 MDYMNMDDRSVGMFWVVSYTMAQ----PACETVMNWLSSAGVTELFPGSNLPPNERLMVM 725
+ M D + + T ++ P V +A V PG+N M
Sbjct: 469 L---GMSDYKIALLCNAYSTNSECFTLPMGVLVETIYGNASVRTSLPGTNC------MAS 519
Query: 726 REVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTRLML-LAPH 779
V PLPM+LL +++ + L + + + + A+VETY+RL++ +
Sbjct: 520 GSVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSIALAPALVETYSRLLVYMEIE 579
Query: 780 SLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKI 834
SL F ++Q P++ G+ +LE+ +YR+ P YR Q ++ +
Sbjct: 580 SLGIKGF--ISQLLPNVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQL--------LSHL 629
Query: 835 ISALKVKRGDHRVLRLA-ENLCMNLILS------QRDFFSLKREGKG--STEFTETLNRI 885
S V + + L L E+ + LI + Q F + K S E +E LNR
Sbjct: 630 HSLAAVPQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFLNDPKTVLSAE-SEELNRA 688
Query: 886 TVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGR 942
++ LA +D+ H + + +L IM+ + H W+ TL FP+ L+
Sbjct: 689 LILTLARATHVTDFFTGSDSIHGTWCKDILHTIMSFTPHNWASHTLSCFPAPLQ----AF 744
Query: 943 IDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQG 1002
+ + ++ + V + + S + + + + P +LC +L++
Sbjct: 745 FKQNNVPQESRFNLKKNVEEEYRKWKSMAIENDIITHFSMQGSPP--LFLCLLWKMLLET 802
Query: 1003 HPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANI-S 1061
++IN RVL + +++ T D L++ E Q L C I +
Sbjct: 803 --DHINQIG-FRVLERIGARALVAHVRTFADFLVY----EFSTSAGGQQL--NKCIEILN 853
Query: 1062 FFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCMNRGPPE 1116
V + ++ LD L+L L R + + ++ + LL + + RV + + PE
Sbjct: 854 DMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVSDF-VKENSPE 912
Query: 1117 HWLYSGLF-KRVELQKALGNHLSWK--------------ERYPTFFDDIAARLLPVIPLI 1161
HWL S K + K L ++ + P +F ++ R LPV ++
Sbjct: 913 HWLQSDWHSKHMNYHKKYPEKLYFEGLADQVNPPIQQQPQYLPIYFGNVCLRFLPVFDIV 972
Query: 1162 VYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGH------LPGKLIVRI 1214
++R +E S + +L ++ +++ + L Y+ H L KL+ I
Sbjct: 973 IHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYERHLRDRTNLKRKLVHAI 1032
Query: 1215 LNVFDLSKIP---FSESFPQ--HISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSG 1269
++ ++ P SE++ + + + V P Y+ L+ LV+ +
Sbjct: 1033 MSSLKDNRTPGWGLSETYMKCGMNAREDNVWIPDDTYYCKLIGRLVDTMA---------- 1082
Query: 1270 STMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSA 1329
K+P GP + R F + +P + L +E+++L V
Sbjct: 1083 -----------GKTP-----GPFPNCDWR--FNEFPNPAAHA---LHVTCVELMALAVPG 1121
Query: 1330 SQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQG-SVLPTSPSGGSTDSLGASRSTPSV 1388
+ ++L+ +V+ QP + + S + N++G + LP D + V
Sbjct: 1122 KDVGNALLNVVLKSQPLVPRESITAW--MNAIGLVITALPEPYWVVLHDRI--------V 1171
Query: 1389 SGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESWWLADGK 1448
S I++ + S + + + L AC
Sbjct: 1172 SVISSPALTSETDWVGYPFALLDFTAC--------------------------------H 1199
Query: 1449 RSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLRP 1508
+S E++ + AL W ++IG + +L F S + L+P
Sbjct: 1200 QSYSEMNCSYVLALAHAVWH-----HSSIGQL-SLTPKFLSEV--------------LKP 1239
Query: 1509 ITSVAM-LRIVFRIMGPLLPRLVNAHTLFNKTLALLLNTMGDVYGKNTLPPAPVEASEIA 1567
I L V+ ++GP L R T + + M +N S +
Sbjct: 1240 IVQTEFQLLYVYHLVGPFLQRFQQERTRCMLEIGVAFYEMLQAVDQNC-----QHLSYMD 1294
Query: 1568 DLIDFLHHVVH-YEGQGGPVQASSKPRPEVLVLTGRAAESLR 1608
+ DFL+H+ + Y G S K + E +++T R A LR
Sbjct: 1295 PICDFLYHIKYMYTGD------SVKEQVEKIIMTLRPAMKLR 1330
>gi|194884710|ref|XP_001976317.1| GG22812 [Drosophila erecta]
gi|190659504|gb|EDV56717.1| GG22812 [Drosophila erecta]
Length = 1428
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 143/681 (20%), Positives = 273/681 (40%), Gaps = 113/681 (16%)
Query: 758 GQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQRNPSLLAKVGVTPL--VLEIVNYRL 814
GQV A+ A++ETY RL++ SL + L+Q P++ L ++E+ +YRL
Sbjct: 559 GQVPAA-ALLETYARLLVYTEIESL--GIKGFLSQLMPTVFKNHAWAMLHTLMEMFSYRL 615
Query: 815 LPL---YRYQGKTKTLMYDITKIISALKVKRG-DHRVLRLAENLCMNLILSQ-RDFFSLK 869
+ YR Q + + +++ + LRL ++ Q +F+ K
Sbjct: 616 HHVPTHYRVQLLSLLHSLSSVPQTNKMQLNLCFESTALRLITSIGSAEFQPQFSRYFNDK 675
Query: 870 REGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLR 929
G ++ +E LNR+ ++ LA + G D + + + L I+ + H+W +L
Sbjct: 676 SPGAVASNESEELNRVLILTLARSMHVHGGGD-EMQGWCKDFLSNIIQHTPHSWPMHSLA 734
Query: 930 YFPSLLRDALIGR----IDKRGL--TIQAWQQAETTVINQ---CTQLLSPSADPTYVKTY 980
FP L + +K+ L ++ + T++ N+ L P+ +P +
Sbjct: 735 CFPPALNEYFTQNNQPPENKQQLKKAVEEEYRTWTSMTNENDIIAHFLRPTTNPLF---- 790
Query: 981 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 1040
LC I+ + ENI S ++L S +++++ D L+
Sbjct: 791 -----------LCLLFKIIWET--ENI-SPVAYKILEGISARALSTHLRKFCDYLV---- 832
Query: 1041 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHA-----LRIVITL 1095
E+ +D + K I+ + ++ +D ++L L R + + L I + L
Sbjct: 833 AEVASSSDGRDFIHKCVDTINNMIWKFNVVTIDRVVLCLALRTHEGNEAQVCFLIIQLLL 892
Query: 1096 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-----------P 1144
L EL+ RV+ +C + P +HW S K L H + E++ P
Sbjct: 893 LKASELRNRVQEFCKDNNP-DHWKQSNW-----QDKHLSFHQKYPEKFALDESASQIPLP 946
Query: 1145 TFFDDIAARLLPVIPLIVYRLIE---NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAY 1201
+F ++ R LPV+ ++V+R IE + +L S ++ +++ + L Y
Sbjct: 947 VYFSNVCLRFLPVLDVVVHRFIELTITNVHQILGFILDHLSILYKFHDRPITYLYNTLHY 1006
Query: 1202 FYG------HLPGKLIVRILNVFDL---SKIPFSESFPQHISSSNPVMCPPLDYFATLLL 1252
+ L KL+ I + F + SE + ++ + + P L Y+ +L+
Sbjct: 1007 YERILRDRPALKKKLVGAITSAFSEIRPANWSVSEPYKVYLQGQDSLWTPELSYYMSLIR 1066
Query: 1253 GLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1312
L + + SG + S N+ P + P++
Sbjct: 1067 RLADTI---------SGKNVFYSTDWRFNEFP----NAPTH------------------- 1094
Query: 1313 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQG-SVLPTSP 1371
L +E+L LPV+ + S+L+ ++V+ + Q Y N+VG + LP
Sbjct: 1095 -ALYVTCVELLGLPVAPPLVASNLIDVIVSGYAVIPQKDIHSY--INAVGIVLAALPEPY 1151
Query: 1372 SGGSTDSLGASRSTPSVSGIN 1392
G D L +TP++ N
Sbjct: 1152 WSGIYDRLQDMLNTPNMLNWN 1172
>gi|449670996|ref|XP_002168234.2| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Hydra magnipapillata]
Length = 1318
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 139/670 (20%), Positives = 266/670 (39%), Gaps = 147/670 (21%)
Query: 759 QVVA-SIAMVETYTRLMLLAPHSLFRSLFSHLAQRNPSLLAKVGVTPL--VLEIVNYRLL 815
QV+A S A+VETY+RL++ L + S ++Q P+++ + + L +LE+ +YRL
Sbjct: 528 QVLALSPALVETYSRLLVYMEIELL-GIKSFISQVLPNVIKRKAWSILHGLLEMFSYRL- 585
Query: 816 PLYRYQGKTK-TLMYDITKIISALKVKRGDHRVLRLAENLCMNLILSQRDFFSLKREGKG 874
+ Q + +L+ + ++ + + ++ + L + + D + +
Sbjct: 586 --HHIQSHYRMSLISSLHNVVPVSDLDKVQIQICVVTTVLKLIMGFGSSDLQAQLSSQRY 643
Query: 875 STEFT-------ETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKT 927
+TE + E LN++ ++ +A I G AD+ + ++++++ + + H WS T
Sbjct: 644 TTEPSVILSKDCEELNKVLILTMARAIHVTG-ADSLPFTWCESIVKESLKLTPHRWSSYT 702
Query: 928 LRYFP----------SLLRDA----LIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSAD 973
L FP S++ D L+ ++K ++ + ET
Sbjct: 703 LASFPVPLQLICSQESVVEDVNGKVLMSVVEKHHRKLKTLNEEETV-------------- 748
Query: 974 PTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVL--REFSPEEVTSNIYTM 1031
+Y + Q +LC +L++ + +L L + S + + +
Sbjct: 749 -----SYFNEK-EQAEIFLCIVWKVLLEHNRITPVCHQILTNLSNKSHSSKPLANGCKFF 802
Query: 1032 VDVLLHHIHVEL----------QRGHSLQDLLFKACANISFFVLTHELLPLDILLLALID 1081
D L+ + + +R L D+++K +E++PLD L+L+L
Sbjct: 803 ADYLVFDFKLYVNNPQNAAQVSKRFQYLNDIIWK-----------YEIIPLDRLILSLTL 851
Query: 1082 RDDDPHALRIVIT-----LLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVEL-QKALGN 1135
R D +I LL EL+ RVK + + P+HW +V+ ++
Sbjct: 852 RPHDEKNSQICFYIIKWLLLQPAELRLRVKKFA-SENTPQHW------TQVDWNERHTAY 904
Query: 1136 HLSWKERY-------------------PTFFDDIAARLLPVIPLIVYRLIENDAMDSADR 1176
H + ERY PT+F +I R LPV ++++RLIE ++ D
Sbjct: 905 HDQYPERYHYEGILEANNITLPNLQYLPTYFGNICLRFLPVFEILIHRLIEVSQWNTLDH 964
Query: 1177 VLATYSSFLAYYPLRFSFVRDILAYFYGHLPGKLIVR---ILNVF----DLSKIPFSESF 1229
+L YS + +++ + L Y+ L I++ +L++ +L FS
Sbjct: 965 ILKEYSPLFKFLEQPITYLYNTLHYYEKKLKENAIIKRKLMLSICTSSGNLLDGIFSTEI 1024
Query: 1230 PQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQS 1289
+ I+ + P +DYF L I A +N S R
Sbjct: 1025 IEFINKESDTWVPNIDYFVELF----QRFITATFFNKSRSSYPSFDWRF----------- 1069
Query: 1290 GPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQ 1349
EF + T L L +E++ LP+SA + ++V +V T+
Sbjct: 1070 ---------NEFLNS------TTLALYATCLELMILPISAEDVGHAIVDLV-----TMCH 1109
Query: 1350 TSNGPYGASN 1359
SN SN
Sbjct: 1110 GSNQTLIKSN 1119
>gi|198461045|ref|XP_001361895.2| GA17618 [Drosophila pseudoobscura pseudoobscura]
gi|198137215|gb|EAL26474.2| GA17618 [Drosophila pseudoobscura pseudoobscura]
Length = 1471
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 142/668 (21%), Positives = 273/668 (40%), Gaps = 95/668 (14%)
Query: 758 GQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQRNPSLLAKVGVTPL--VLEIVNYRL 814
GQV A+ A++ETY RL++ SL F L+Q P++ L ++E+ +YRL
Sbjct: 559 GQVPAA-ALLETYARLLVYTEIESLGVKGF--LSQLMPTVFKNHAWAMLHTLMEMFSYRL 615
Query: 815 LPL---YRYQGKTKTLMYDITKIISALKVKRG-DHRVLRLAENLCMNLILSQ-RDFFSLK 869
+ YR Q + + +++ + LRL ++ Q +F+ K
Sbjct: 616 HHVPTHYRVQLLSLLHSLSSVPQTNKMQLNLCFESTGLRLITSIGSAEFQPQFSRYFNDK 675
Query: 870 REGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLR 929
G ++ +E LNR+ ++ LA + G D + + + L IM + H+WS ++L
Sbjct: 676 SPGAVASNESEELNRVLILTLARSMHVHGGGD-EMQSWCKDFLANIMQHTPHSWSLQSLA 734
Query: 930 YFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHR 989
FP L + + + QQ + +V + S +++ + +L + +
Sbjct: 735 CFPPALNEYF----TQNAQPPENKQQLKKSVEEEYRTWTSMTSENDIIAHFLRPT--TNP 788
Query: 990 QYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSL 1049
+LC I+ + E+I S ++L S +T+++ D L+ E+
Sbjct: 789 LFLCLLFKIIWET--ESI-SPVAYKILEGISARALTTHLRKFCDYLV----AEVASSSDG 841
Query: 1050 QDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHA-----LRIVITLLDRQELQQR 1104
+D + K I+ + ++ +D ++L L R + + L I + LL EL+ R
Sbjct: 842 RDFIHKCVDTINNMIWKFNVVTIDRVVLCLALRTHEGNEAQVCFLIIQLLLLKASELRNR 901
Query: 1105 VKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-----------PTFFDDIAAR 1153
V+ +C + P +HW S K L H + E++ P +F ++ R
Sbjct: 902 VQEFCKDNNP-DHWKQSNW-----QDKHLSFHQKYPEKFALDESASHLALPVYFSNVCLR 955
Query: 1154 LLPVIPLIVYRLIE---NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYG------ 1204
LPV+ ++V+R IE + +L S ++ +++ + L Y+
Sbjct: 956 FLPVLDVVVHRFIELTIPNVHQILGFILDHLSILYKFHDRPITYLYNTLHYYERILRERP 1015
Query: 1205 HLPGKLIVRILNVFDLSKIP---FSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPA 1261
L KL+ I F + P SE + + + + + P L Y+ L+ L +
Sbjct: 1016 PLKKKLVSTITGAFSDIRPPNWSVSEPYKVFLQNQDLLWNPELSYYMNLIKRLSETI--- 1072
Query: 1262 LNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIE 1321
SG + + N+ P + P++ L +E
Sbjct: 1073 ------SGKNVFYTTDWRFNEFP----NAPAH--------------------ALYVTCVE 1102
Query: 1322 ILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVG-QGSVLPTSPSGGSTDSLG 1380
+L LPV+ + + ++L+ ++V+ + Q Y N+VG + LP G D L
Sbjct: 1103 LLGLPVAPALVANNLIDVIVSGYAVIPQKEIHSY--INAVGIVMAALPEPYWTGIYDRLK 1160
Query: 1381 ASRSTPSV 1388
+TP++
Sbjct: 1161 EMLNTPNM 1168
>gi|195170266|ref|XP_002025934.1| GL10134 [Drosophila persimilis]
gi|194110798|gb|EDW32841.1| GL10134 [Drosophila persimilis]
Length = 1469
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 142/668 (21%), Positives = 273/668 (40%), Gaps = 95/668 (14%)
Query: 758 GQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQRNPSLLAKVGVTPL--VLEIVNYRL 814
GQV A+ A++ETY RL++ SL F L+Q P++ L ++E+ +YRL
Sbjct: 559 GQVPAA-ALLETYARLLVYTEIESLGVKGF--LSQLMPTVFKNHAWAMLHTLMEMFSYRL 615
Query: 815 LPL---YRYQGKTKTLMYDITKIISALKVKRG-DHRVLRLAENLCMNLILSQ-RDFFSLK 869
+ YR Q + + +++ + LRL ++ Q +F+ K
Sbjct: 616 HHVPTHYRVQLLSLLHSLSSVPQTNKMQLNLCFESTGLRLITSIGSAEFQPQFSRYFNDK 675
Query: 870 REGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLR 929
G ++ +E LNR+ ++ LA + G D + + + L IM + H+WS ++L
Sbjct: 676 SPGAVASNESEELNRVLILTLARSMHVHGGGD-EMQSWCKDFLANIMQHTPHSWSLQSLA 734
Query: 930 YFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHR 989
FP L + + + QQ + +V + S +++ + +L + +
Sbjct: 735 CFPPALNEYF----TQNAQPPENKQQLKKSVEEEYRTWTSMTSENDIIAHFLRPT--TNP 788
Query: 990 QYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSL 1049
+LC I+ + E+I S ++L S +T+++ D L+ E+
Sbjct: 789 LFLCLLFKIIWET--ESI-SPVAYKILEGISARALTTHLRKFCDYLV----AEVASSSDG 841
Query: 1050 QDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHA-----LRIVITLLDRQELQQR 1104
+D + K I+ + ++ +D ++L L R + + L I + LL EL+ R
Sbjct: 842 RDFIHKCVDTINNMIWKFNVVTIDRVVLCLALRTHEGNEAQVCFLIIQLLLLKASELRNR 901
Query: 1105 VKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-----------PTFFDDIAAR 1153
V+ +C + P +HW S K L H + E++ P +F ++ R
Sbjct: 902 VQEFCKDNNP-DHWKQSNW-----QDKHLSFHQKYPEKFALDESASHLALPVYFSNVCLR 955
Query: 1154 LLPVIPLIVYRLIE---NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYG------ 1204
LPV+ ++V+R IE + +L S ++ +++ + L Y+
Sbjct: 956 FLPVLDVVVHRFIELTIPNVHQILGFILDHLSILYKFHDRPITYLYNTLHYYERILRERP 1015
Query: 1205 HLPGKLIVRILNVFDLSKIP---FSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPA 1261
L KL+ I F + P SE + + + + + P L Y+ L+ L +
Sbjct: 1016 PLKKKLVSTITGAFSDIRPPNWSVSEPYKVFLQNQDLLWNPELSYYMNLIKRLSETI--- 1072
Query: 1262 LNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIE 1321
SG + + N+ P + P++ L +E
Sbjct: 1073 ------SGKNVFYTTDWRFNEFP----NAPAH--------------------ALYVTCVE 1102
Query: 1322 ILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVG-QGSVLPTSPSGGSTDSLG 1380
+L LPV+ + + ++L+ ++V+ + Q Y N+VG + LP G D L
Sbjct: 1103 LLGLPVAPALVANNLIDVIVSGYAVIPQKEIHSY--INAVGIVMAALPEPYWTGIYDRLK 1160
Query: 1381 ASRSTPSV 1388
+TP++
Sbjct: 1161 EMLNTPNM 1168
>gi|66826893|ref|XP_646801.1| hypothetical protein DDB_G0270434 [Dictyostelium discoideum AX4]
gi|74858180|sp|Q55BN0.1|MED23_DICDI RecName: Full=Putative mediator of RNA polymerase II transcription
subunit 23; AltName: Full=Putative mediator complex
subunit 23
gi|60474630|gb|EAL72567.1| hypothetical protein DDB_G0270434 [Dictyostelium discoideum AX4]
Length = 1662
Score = 70.5 bits (171), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 103/467 (22%), Positives = 202/467 (43%), Gaps = 60/467 (12%)
Query: 505 MISEAVIDRIVELL-KLTNS------EVNCWHDWLIFSDVFFFLVKSGCIDFVDFVDKLV 557
+I+EA I + ++LL K N E N W +WL+FS+ F+FL ++G +D F+ L
Sbjct: 455 IITEATISKTMQLLNKYPNQIIENQIENNSWKEWLLFSEQFYFLCENGLVDLEQFIVTLS 514
Query: 558 -SRLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRK------ILSFHRED 610
R+ +GD ++ N V L+++ I ++ V + V + +LSF D
Sbjct: 515 EKRMNNGDP--IKDNMVVLLISKTIIIQDVKTLFKQHLQNVNSNHYGHLIPLVLSFVNND 572
Query: 611 RCTDPNNPQSILLDFISSCQNLRIWSLNTST---------REYLNNEQLQKG--KQIDEW 659
P Q+I L F + +NT+T ++ L+N Q +Q W
Sbjct: 573 -SNYPIISQNISLYFF-------LMRINTNTENPEIIAHIKKLLDNFNFQFTLFQQYRNW 624
Query: 660 WRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTEL-FPGSNLPP 718
W + + + D + F ++ + ++ + S+ + FPG
Sbjct: 625 WESEKVKQKPEFFTTIQD--ITYFSIICNVIPTEGEMELIRFQSNGSDQSIQFPGVG--- 679
Query: 719 NERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAP 778
+V ++ P+ +L SL KL + + +V S +E Y R + P
Sbjct: 680 GIGTVVTGKIKPVSNLILLNLSLRCRRKLIQESVLLLLDKEVPISPGFLEDYCRTVHYTP 739
Query: 779 HSLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRLLPLYRYQGKTKTLMYDITKI---- 834
+ LFS+ + ++ V+E V++RLL + + + L+ + I
Sbjct: 740 GPVSPFLFSYFKK-----FHRLAPIHAVIESVSHRLLKVLKSNKELAVLLRALQDIQTQK 794
Query: 835 -ISALKVKRG-DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAI 892
I +++ R D+ +L+ + +L ++LI + +E S + NR + ++A
Sbjct: 795 PIQNIQLSRSIDYLLLKASISLPVDLISA--------KEIWKSLDLGLFNNRRLITSIAR 846
Query: 893 IIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDAL 939
+IK +GI D + + + +E ++ + +S+ TL +FP +L++
Sbjct: 847 LIKLKGIQDFNRISDVPVFIENCFKSNPYCFSKSTLEFFPDILKNEF 893
Score = 44.7 bits (104), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 77/172 (44%), Gaps = 30/172 (17%)
Query: 1064 VLTHELLPLDILLLALIDRDDDPHALRIVIT-LLDRQELQQRVKLYCMNRGPPEHWLYSG 1122
+ T+++L L+ +LLAL+DRDD P I+ T L E+Q R++ + P + S
Sbjct: 1052 IFTYKILTLNSVLLALLDRDDHPSMPTILDTFLFSSAEIQNRLQFFS---TYPSDFFISQ 1108
Query: 1123 LFKRVELQKALGNHLSWKERY-----------------------PTFFDDIAARLLPVIP 1159
F+ + + + R+ P ++ + +RL+P++
Sbjct: 1109 SFRNDD--NYFIKNCEFNNRFNDLIPTVIDPNTLIEQSTQDTILPIYYSNSISRLMPIVE 1166
Query: 1160 LIVYRLIENDAMDSADRVLATYSSFLAYY-PLRFSFVRDILAYFYGHLPGKL 1210
+I+ + IE + D ++ + ++ YY + + ++D L Y+Y KL
Sbjct: 1167 IIISKSIELNNGDLFEKTINHFNIPYHYYQDEKETTIKDTLIYYYDSQLFKL 1218
>gi|328715200|ref|XP_001951332.2| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Acyrthosiphon pisum]
Length = 1435
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 139/704 (19%), Positives = 274/704 (38%), Gaps = 132/704 (18%)
Query: 704 SAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 758
S G T G+ N M PL M++L +++ + L + +
Sbjct: 555 SGGTTSPISGNASSSN----AMGPTTPLSMAVLDSLTIHAKMSLIHSIVTHVLKLAQSKS 610
Query: 759 QVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 814
+ + A+ ETY+RL++ SL F ++Q P++ G+ +LE+ +YR+
Sbjct: 611 NLALAPALAETYSRLLVYTEIESLGIKGF--ISQVLPTVFKSHAWGILYTLLEMFSYRMH 668
Query: 815 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 866
P YR Q L+ + + + + + + LRL L N + Q F
Sbjct: 669 HIQPHYRVQ-----LLSHLHSLAAVPQTNQTQLHLCVESTALRLITGLGSNEVQPQLSRF 723
Query: 867 SLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEK 926
+ + S E E LNR V+ LA + G + + + + +L IMA + HTW+
Sbjct: 724 LSEPKTLVSAE-CEELNRALVLTLARSMHITGTSASQEGSWCKELLTTIMANTPHTWAPH 782
Query: 927 TLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFP 986
TL+ FP L D + +T + QQ + V + S + + + + S P
Sbjct: 783 TLQCFPPALADFFV----HNPITKENKQQLKKAVEEEYRNWASMTNENDIIAHF---SVP 835
Query: 987 Q-HRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQR 1045
H +LC ++++ + IN ++L +++++ D L+ V +
Sbjct: 836 TAHPLFLCLLWKMIIET--DRINPIA-YKILERIGARALSAHLRKFCDYLVFKFAVSEEG 892
Query: 1046 GHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQE 1100
H + K I+ + + ++ +D L+L L R + ++ + L E
Sbjct: 893 QH-----VNKCVDAINSMIWKYNIVTIDRLVLCLALRTQEGSEAQVCFFIIQLLLFKGAE 947
Query: 1101 LQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------PTF 1146
+ RV + + PEHW S +K L H + E++ P +
Sbjct: 948 FRARVCEF-VKENSPEHWKQSNWH-----EKHLAFHRKYPEKFAPEGILDPASYQPLPVY 1001
Query: 1147 FDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGH 1205
F ++ R LPV ++++R +E S + +L ++ +++ + L Y+
Sbjct: 1002 FGNVCLRFLPVFDIVIHRYLELPPVTKSLETLLDHLGCLYKFHDRPVTYLYNTLHYYESK 1061
Query: 1206 ------LPGKLIVRILNVFDLSK--IPFSESFPQH--------------------ISSSN 1237
L KL+ +L ++ SES+ ++ ++ S
Sbjct: 1062 LRDRPSLKRKLVYAVLGSLCETRGCWTLSESYQRYNIQTPTSTISNSMGTSTDVTVTPSA 1121
Query: 1238 PVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEG 1297
P+ P L+Y+ L+ + TM+ +++ P N+
Sbjct: 1122 PIWVPDLEYYVMLV--------------KRITDTMNGNVKFP-------------NIDWR 1154
Query: 1298 RKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVV 1341
EF +P Y L E+++LP++ + + +SL+ +V+
Sbjct: 1155 FNEF---PNPAVYA---LYMTCAELMALPLTPASVANSLLDVVM 1192
>gi|443693191|gb|ELT94621.1| hypothetical protein CAPTEDRAFT_178592 [Capitella teleta]
Length = 1261
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 111/499 (22%), Positives = 208/499 (41%), Gaps = 107/499 (21%)
Query: 730 PLPMSLLTGFSLNLCLKLALQMEDSIF------GGQVVASIAMVETYTRLML-LAPHSLF 782
PLPMS+L +++ + L + + V + A+VETY+RL++ + SL
Sbjct: 445 PLPMSMLDSLTVHAKMSLIHSIVTRVIRLAQNKSNAVALAPALVETYSRLLVYIEIESLG 504
Query: 783 RSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKIISA 837
F ++Q PS+ G+ +LE+ +YRL P YR Q L+ + + S
Sbjct: 505 IKGF--ISQLLPSVFKSHAWGILHTLLEMFSYRLHHIQPHYRIQ-----LLSHLHSLASV 557
Query: 838 LKVKRGDHRVLRLAENLCMNLILS------QRDFFSLKREGKGSTEFT---ETLNRITVI 888
+ + + E+ + LI+ Q + E K T + E LNR V+
Sbjct: 558 PQTNQNQLHIC--VESTALRLIMGLGSGEVQPQLSRVLNEPKTLTLLSSESEELNRALVL 615
Query: 889 ALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDAL----IGRID 944
LA + G + + + + +L I + H+W+ TL YFP ++ D I R D
Sbjct: 616 TLARSLHVTGCDSSGN--WCRDILTTIQQHTPHSWASHTLAYFPQVISDFYKQNPIQRED 673
Query: 945 KRGLT------IQAWQQ--AETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGA 996
K L + W+ +E+ +IN + S P ++ L S + +++
Sbjct: 674 KNTLKRSVDTEYRKWKSMASESDLINHFSMQGSQGMSPLFL-CVLWKSLVEDKRF----- 727
Query: 997 WILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV-----ELQRG-HSLQ 1050
+ +VL P +++++ T D L++ ++ + SL
Sbjct: 728 ------------APTAYKVLDRLGPRLLSAHLRTFADYLVYEFATAGAGQQINKCVESLN 775
Query: 1051 DLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRV 1105
DL++K C IS +D L+L L R+ + + ++ + L+ E + RV
Sbjct: 776 DLIWK-CNIIS----------VDRLVLCLALRNFEENESQVCFFIIQVVLVRSPEFRNRV 824
Query: 1106 KLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-----------------PTFFD 1148
+ + P+HW+ +G +K + H ++ ER+ P +F
Sbjct: 825 NEF-VKENAPDHWMQTGWH-----EKHMAFHRTYPERFYYDGAQDISQASQHQYLPVYFG 878
Query: 1149 DIAARLLPVIPLIVYRLIE 1167
++ R LPV ++++RL+E
Sbjct: 879 NLCLRFLPVFDILIHRLLE 897
>gi|170027961|ref|XP_001841865.1| CRSP complex subunit 3 [Culex quinquefasciatus]
gi|167868335|gb|EDS31718.1| CRSP complex subunit 3 [Culex quinquefasciatus]
Length = 1375
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 129/640 (20%), Positives = 252/640 (39%), Gaps = 130/640 (20%)
Query: 765 AMVETYTRLMLLAP-HSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLY 818
A+VETY+RL++ SL F L+Q P + G+ +LE+ +YR+ P Y
Sbjct: 554 ALVETYSRLLVYTEIESLGIKGF--LSQLLPQVFKSHAWGILYTLLEMFSYRMHHIQPHY 611
Query: 819 RYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQ--RDFFSLKR 870
R Q L+ + + S + + LRL L + +Q R K
Sbjct: 612 RVQ-----LLSHLHSLASVPHTNQMQLHSCVESTALRLITGLGSVEVQAQLSRYVNEPKA 666
Query: 871 EGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRY 930
G + +E LNR ++ LA ++ G + + + +L IM + HTWS+ TL+
Sbjct: 667 PGNIVSAESEELNRALILTLARSMQITGTGNDPQSTWCKDLLTSIMTNTPHTWSQHTLQC 726
Query: 931 FPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTY------------VK 978
FP +L D + + ++ + QLL S D Y +
Sbjct: 727 FPPVLNDFFV----------------QNSIPKENKQLLKKSVDEEYRNWAGMSNENDIIS 770
Query: 979 TYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHH 1038
+ + P +LC ++++ + S + L +++++ + D L+
Sbjct: 771 HFGAAGTPP--LFLCLLFKMIVET---DTISPVAYKTLERIGARALSAHLRKLCDYLVFE 825
Query: 1039 IHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALR-----IVI 1093
+ H + K I+ + + +L +D L+L L R + + + I +
Sbjct: 826 VSNSGVGAH-----VNKCVDTINDMIWKYNILTIDRLVLCLSLRTLEGNEAQVSFCIIQL 880
Query: 1094 TLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY---------- 1143
LL E + R++ + +N PEHW + +R L H + E++
Sbjct: 881 LLLKTSEFRNRLQEF-VNNNSPEHWKQNNWHER-----HLAFHQKFPEKFAPDESVSHPS 934
Query: 1144 --PTFFDDIAARLLPVIPLIVYRLIENDAMDSA--DRVLATYSSFLAYYPLRFSFVRDIL 1199
P +F ++ R LPV+ + ++R +E A S D +L S ++ +++ + L
Sbjct: 935 TLPVYFGNVCLRFLPVLDITIHRYLEVPATMSKTLDVLLDHLGSLYKFHDRPITYLYNTL 994
Query: 1200 AYFYG------HLPGKLIVRILNVFDLSK---IPFSESFPQHISSSNPVM--CPPLDYFA 1248
Y+ HL +L+ ++ + ++ + +++ + + P L+Y+
Sbjct: 995 HYYEKRLRERPHLKRRLVGTVIGSLKDVRPENWALTKQYHEYMLKKDETVNWLPELNYYI 1054
Query: 1249 TLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRK-EFYQNQDP 1307
TL+ + T+D +NV +G F + +P
Sbjct: 1055 TLV--------------RRMQDTIDG-----------------NNVFQGTDWRFNEFPNP 1083
Query: 1308 GTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTL 1347
+ L + +E+L LPV + +SL+ +VV P +
Sbjct: 1084 PAHA---LYVSCVELLGLPVGPQTVANSLIDVVVKGYPVI 1120
>gi|327261891|ref|XP_003215760.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Anolis carolinensis]
Length = 1433
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 160/750 (21%), Positives = 288/750 (38%), Gaps = 138/750 (18%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 341 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 399
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 647
+D V +L + E C D N PQS F +C IW ++ + + + +N
Sbjct: 400 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAHSDN 450
Query: 648 EQLQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQ----PACETV 698
+LQ K E+ +Q + + M+D + + T ++ P V
Sbjct: 451 SKLQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSECFTLPMGVLV 506
Query: 699 MNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG- 757
+ + PG+N M + PLPM+LL +++ + L + +
Sbjct: 507 ETIYGNGNMRTPLPGTNC------MASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKL 560
Query: 758 ----GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIV 810
+ + A+VETY+RL++ + SL + ++Q P++ G+ +LE+
Sbjct: 561 AHAKSSLALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMF 618
Query: 811 NYRL---LPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLA-ENLCMNLILS----- 861
+YR+ P YR Q ++ + S V + + L L E+ + LI +
Sbjct: 619 SYRMHHIQPHYRVQL--------LSNLHSLAAVPQTNQNQLHLCVESTALRLITALGSSE 670
Query: 862 -QRDFFSLKREGKG--STEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQI 915
Q F E K S E +E LNR ++ LA +D+ + + +L+ I
Sbjct: 671 VQPQFTRFLNEPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTI 729
Query: 916 MATSQHTWSEKTLRYFPSLLRDALI-------GRID-KRGLTIQAWQQAETTVINQCTQL 967
M + H W+ TL FP+ L+ R + K+ + + + T+ N
Sbjct: 730 MNFTPHNWASHTLSCFPAPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSMTIENDIITH 789
Query: 968 LSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSN 1027
S P +LC +L++ ++IN RVL + ++
Sbjct: 790 FSMQGSPPL--------------FLCLLWKMLLET--DHINQIG-YRVLERIGARALVAH 832
Query: 1028 IYTMVDVLLHHIHVELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDP 1086
I T D L++ E Q L C I + V + ++ LD L+L L R +
Sbjct: 833 IRTFADFLVY----EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEG 886
Query: 1087 HALRIV-----ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKE 1141
+ ++ + LL + + RV + + PEHWL + + H+S+ +
Sbjct: 887 NEAQVCYFIIQLLLLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMSYHK 936
Query: 1142 RY------------------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADR 1176
+Y P +F ++ R LPV ++++R +E S +
Sbjct: 937 KYPEKLYFEGLAEQVNPPVQTQSQYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLET 996
Query: 1177 VLATYSSFLAYYPLRFSFVRDILAYFYGHL 1206
+L ++ +++ + L Y+ GHL
Sbjct: 997 LLDHLGGLYKFHDRPVTYLYNTLHYYEGHL 1026
>gi|198432439|ref|XP_002122763.1| PREDICTED: similar to mediator of RNA polymerase II transcription
subunit 23 [Ciona intestinalis]
Length = 1386
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 148/727 (20%), Positives = 281/727 (38%), Gaps = 157/727 (21%)
Query: 718 PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-GQVVASI----AMVETYTR 772
P + + P M LL +++ + + + I Q +S+ A+VETY+R
Sbjct: 518 PGNNCVAFNKTVPCSMDLLDTLTVHTKMSMLHSISTKIQKFAQAKSSVGLAPALVETYSR 577
Query: 773 LMLLAPHSLF--RSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRL---LPLYRYQGKTKTL 827
L++ + L S + + A G+ +LE+++YR+ P YR Q
Sbjct: 578 LLIYYEIETLGIKILVSQVVPKVYEYRA-WGILNTLLELMSYRMHHIQPNYRIQL----- 631
Query: 828 MYDITKIISALKVKRGDHRVLRLA-ENLCMNLILSQRDFFSLK-------REGKGS--TE 877
+T + + + R L L E+ + LI+ D F +K E K S ++
Sbjct: 632 ---LTHLHTLANSPHANQRQLHLRLESTALKLIMG-FDNFGIKPQLVRMFNEQKQSIVSQ 687
Query: 878 FTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSL 934
+E LNR+ V+ LA I G+ A++ + +L+ +M+ + H W ++TL FP
Sbjct: 688 KSEELNRVLVLTLARSIHITGLFSGAESISGSWCTDILKAVMSATPHRWPQQTLACFPQS 747
Query: 935 LRDAL----IGRIDKRGLTIQAWQQ-----------------------AETTVINQCTQL 967
++D + ++K+ L Q+ E +N +Q
Sbjct: 748 IQDFFNHSNVEPLNKKQLKTNVEQEYIKWAPLLSADGMDSSSSSGSSLTEADALNHFSQ- 806
Query: 968 LSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSN 1027
P P Y LC +L + E S+ +VL +++ +
Sbjct: 807 --PGTPPYY---------------LCLLWKVLFE---EKKLSSTSYKVLERIGASQLSQH 846
Query: 1028 IYTMVDVLLHHIHVELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDP 1086
+ D L++ V L+ G + K CAN+ V + ++ LD L+L L R +
Sbjct: 847 VRKFSDFLVYEFSV-LEGGSDV-----KICANVLQDMVWKYNIVFLDRLILCLALRSSEA 900
Query: 1087 HALRIVI-----TLLDRQELQQRVKLYCMNRGPPEHWL----------YSGLFKRVELQK 1131
+ +++ L+ + RV+ + + +HW+ Y F +
Sbjct: 901 NDVQVAFFIIQYLLIKPDDFLNRVRSFDHDVENLDHWMQDDWHAKHMAYHQKFPEHYFFE 960
Query: 1132 ALGNHLSWKER------------YPTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVL 1178
L H S E+ PT+F +I R LPV+ ++++R +E + S + +L
Sbjct: 961 GLVAHCSSPEQPNATGEKPQPTYLPTYFCNITLRFLPVLDIVIHRCLELPPSSKSLETLL 1020
Query: 1179 ATYSSFLAYYPLRFSFVRDILAYFYGHLPG------KLIVRILNVFDLSKIP---FSESF 1229
++ +++ + L Y+ L G KL+ I+ +K P SE+F
Sbjct: 1021 EHLGLLYKFHDQPVTYLFNTLHYYESKLRGRHLLKKKLVSTIIGAITKNKPPGWILSETF 1080
Query: 1230 PQHISSSNPVMCPPLD-YFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQ 1288
++ N P Y+ L+ L N V G M +S +
Sbjct: 1081 MDYLQQPNDQQWQPDSVYYCQLIQRLANTV----------GGKMTSSFSS---------- 1120
Query: 1289 SGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLI 1348
+++ N+ P + L +E L+LP+ Q+ +L+ +V+ Q +
Sbjct: 1121 ----------RDWRFNEFPNASSH-ALHVTCVEALALPLPGEQVGQALMDVVLKTQSFVE 1169
Query: 1349 QTSNGPY 1355
+ + P+
Sbjct: 1170 REQSLPW 1176
>gi|195383738|ref|XP_002050583.1| GJ22230 [Drosophila virilis]
gi|194145380|gb|EDW61776.1| GJ22230 [Drosophila virilis]
Length = 1413
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 140/697 (20%), Positives = 276/697 (39%), Gaps = 104/697 (14%)
Query: 734 SLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQR 792
SL ++L QM +V + A++ETY RL++ SL + L Q
Sbjct: 530 SLTVHSKMSLIHSFVTQMLKQAQSKTLVPAPALIETYARLLVYTEIESL--GIKGFLTQL 587
Query: 793 NPSLLAKVGVTPL--VLEIVNYRLLPL---YRYQGKTKTLMYDITKIISALKVKRG-DHR 846
P++ L ++E+ +YRL + YR Q + + +++ +
Sbjct: 588 LPTVFKNQAWAMLHTLMEMFSYRLHHVPTHYRVQLLSLLYTLSSVPPTNKMQLNLCFEST 647
Query: 847 VLRLAENLCMNLILSQ-RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHV 905
LRL ++ SQ + + K G ++ +E LNR+ ++ LA + G D +
Sbjct: 648 ALRLITSIGSAEFQSQFSRYLNDKSPGGVASNESEELNRVLILTLARSMHVHGGGD-ELA 706
Query: 906 LYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCT 965
+ + L IM + H+W ++L FP L + + + QQ + +V +
Sbjct: 707 GWCKDFLSNIMQHTPHSWPMQSLACFPPALNEYFT----QNNHPAENKQQLKKSVEEEYR 762
Query: 966 QLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVT 1025
S S + + ++ + + +LC I+ + E+I S ++L S ++
Sbjct: 763 NWTSMSNENDIIAHFIRPN--TNPLFLCLLFKIIWET--ESI-SPVAYKILEGISARALS 817
Query: 1026 SNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDD 1085
+++ D L+ E+ +D + K I+ + ++ +D L+L L R +
Sbjct: 818 THLRKFCDYLV----AEVASSSDGRDFIHKCVDTINNMIWKFNVVTIDRLVLCLALRTHE 873
Query: 1086 PHALRIVITLL-----DRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWK 1140
+ ++ + ++ EL+ RV+ +C + P +HW S +K L H ++
Sbjct: 874 GNEAQVCLIIIQLLLLKASELRNRVQEFCKDNNP-DHWKQSNWH-----EKHLQFHQNYP 927
Query: 1141 ERY-----------PTFFDDIAARLLPVIPLIVYRLIE---NDAMDSADRVLATYSSFLA 1186
E++ P +F ++ R LPV+ ++V+R IE + +L S
Sbjct: 928 EKFAPDESASQIPLPVYFSNVCLRFLPVLDVVVHRFIELTIPNVHQILGIILDHLSILYK 987
Query: 1187 YYPLRFSFVRDILAYF----YGHLP--GKLIVRILNVFDL---SKIPFSESFPQHISSSN 1237
++ +++ + L Y+ LP KL+ I + F + SE + ++ S +
Sbjct: 988 FHDRPITYLYNTLHYYERILRDRLPLKKKLVSTITSAFSEIRPANWSVSEPYKVYLQSQD 1047
Query: 1238 PVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEG 1297
+ P L Y+ L+ L + + G
Sbjct: 1048 ALWTPELSYYMNLIRRLADTI-------------------------------------SG 1070
Query: 1298 RKEFYQ-----NQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSN 1352
+ FY N+ P T + T V E+L LP++ S + +++ ++VN + Q
Sbjct: 1071 KNVFYTTDWRFNEFPNAPTHALYVTCV-ELLGLPLAPSVVAGNIIDVIVNGYAVVPQKEI 1129
Query: 1353 GPYGASNSVGQG-SVLPTSPSGGSTDSLGASRSTPSV 1388
Y N+VG + LP D L +TP++
Sbjct: 1130 HSY--INAVGIVLAALPEPYWSAIYDRLQDMLNTPNM 1164
>gi|348506541|ref|XP_003440817.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Oreochromis niloticus]
Length = 1394
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 239/1183 (20%), Positives = 448/1183 (37%), Gaps = 230/1183 (19%)
Query: 505 MISEAVIDRIVELLKLTNSEVNCWHD--------WLIFSDVFFFLVKSGCIDFVDFVDKL 556
++ E ++D +V ++ + +E + D W S F V F V L
Sbjct: 305 VLEEQLVDLVVYAMERSETEEHFDADIGGTSQLLWQHLSSQLIFFVLFQFASFPHMVLSL 364
Query: 557 VSRLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRKILSFHREDRCT--- 613
+L G I +H+ W+L Q I + AL +D V +L + E C
Sbjct: 365 HQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL-ADFLPVMKLFDLL--YPEKECIPVP 420
Query: 614 DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ----KGKQIDEWWRQVSKGDRM 669
D N PQS F +C IW ++ + + +N +LQ ++ + Q S ++
Sbjct: 421 DINKPQSTH-SFAMTC----IW-IHLNRKAQNDNSKLQIPIPHSLKLHHEFLQQSLRNKT 474
Query: 670 MDYMNMDDRSVGMFWVVSYTMAQ----PACETVMNWLSSAGVTELFPGSNLPPNERLMVM 725
+ M D + + T ++ P V + + PG+N M
Sbjct: 475 L---GMSDYKIALLCNAYSTNSECFTLPMGVLVETIYGNGSMRINLPGTNC------MAS 525
Query: 726 REVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTRLML-LAPH 779
V PLPM+LL +++ + L + + + + A+VETY+RL++ +
Sbjct: 526 GSVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSIALAPALVETYSRLLVYMEIE 585
Query: 780 SLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKI 834
SL + ++Q P++ G+ +LE+ +YR+ P YR Q ++ +
Sbjct: 586 SL--GIKGFISQLLPNVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQL--------LSHL 635
Query: 835 ISALKVKRGDHRVLRLA-ENLCMNLILS------QRDFFSLKREGKG--STEFTETLNRI 885
S V + + L L E+ + LI + Q F + K S E +E LNR
Sbjct: 636 HSLAAVPQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFLNDPKTVLSAE-SEELNRA 694
Query: 886 TVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGR 942
++ LA +D+ + + +L+ IM+ + H W+ TL FP+ L+
Sbjct: 695 LILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNWASHTLSCFPAPLQ----AF 750
Query: 943 IDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQG 1002
+ + ++ + V + + S + + + + P +LC +L++
Sbjct: 751 FKQNNVPQESRFNLKKNVEEEYRKWKSMANENDIITHFSMQGSPP--LFLCLLWKMLLEM 808
Query: 1003 HPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANI-S 1061
++IN RVL + +++ T D L++ E Q L C I +
Sbjct: 809 --DHINQIG-FRVLERIGARALVAHVRTFADFLVY----EFSTSAGGQQL--NKCIEILN 859
Query: 1062 FFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCMNRGPPE 1116
V + ++ LD L+L L R + + ++ + LL + + RV + + PE
Sbjct: 860 DMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVNDF-VKENAPE 918
Query: 1117 HWLYSGLF-KRVELQKALGNHLSWK--------------ERYPTFFDDIAARLLPVIPLI 1161
HWL + K + K L ++ + P +F ++ R LPV ++
Sbjct: 919 HWLQNDWHSKHMNYHKKYPEKLYFEGLADQVNPPMQLQPQYLPIYFGNVCLRFLPVFDIV 978
Query: 1162 VYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGH------LPGKLIVRI 1214
++R +E S + +L ++ +++ + L Y+ H L KL+ I
Sbjct: 979 IHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYERHLRDRTNLKRKLVHAI 1038
Query: 1215 LNVFDLSKIP---FSES---FPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKS 1268
++ ++ P SE+ F + N V P Y+ L+ LV+ +
Sbjct: 1039 MSSLKDNRTPGWCLSETYLRFGMNAREEN-VWIPDDTYYCKLIGRLVDTMA--------- 1088
Query: 1269 GSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVS 1328
KSP GP + R F + +P + L +E+++L V
Sbjct: 1089 ------------GKSP-----GPFPNCDWR--FNEFPNPAAHA---LHVTCVELMALAVP 1126
Query: 1329 ASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQG-SVLPTSPSGGSTDSLGASRSTPS 1387
+ ++L+ +V+ QP + + + + N++G + LP D +
Sbjct: 1127 GKDVGNALLNVVLKSQPLVPRENITAW--MNAIGLVITALPEPYWIVLHDRI-------- 1176
Query: 1388 VSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESWWLADG 1447
VS I++ + S + +T + L AC
Sbjct: 1177 VSVISSPALTSETEWTGYPFALLDFTAC-------------------------------- 1204
Query: 1448 KRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLR 1507
+S E++ + AL W ++IG + +L+ F S + L+
Sbjct: 1205 HQSYSEMNCSYVLALAHAVWH-----HSSIGQL-SLIPKFLS--------------ETLK 1244
Query: 1508 PITSVAM-LRIVFRIMGPLLPRLVNAHTLFNKTLALLLNTMGDVYGKNTLPPAPVEASEI 1566
PI L V+ ++GP L R T + + M K+ S +
Sbjct: 1245 PIVKTEFQLLYVYHLVGPFLQRFQQERTRCMLEIGVAFYEMLQAVDKHC-----QHLSYM 1299
Query: 1567 ADLIDFLHHVVH-YEGQGGPVQASSKPRPEVLVLTGRAAESLR 1608
+ DFL+H+ + Y G S K + E +++T R A LR
Sbjct: 1300 DPICDFLYHIKYMYTGD------SVKEQVEKIIMTLRPAMKLR 1336
>gi|340716902|ref|XP_003396930.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Bombus terrestris]
Length = 1355
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 145/723 (20%), Positives = 286/723 (39%), Gaps = 119/723 (16%)
Query: 730 PLPMSLLTGFSLNLCLKLALQMEDSIFGG-----QVVASIAMVETYTRLMLLAP-HSLFR 783
PL MS+L +++ + L + + + + A+VETY+RL++ SL
Sbjct: 538 PLSMSILDSLTVHSKMSLIHSIVTHVIKSAQSKSNMALAPALVETYSRLLVYTEIESLGI 597
Query: 784 SLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKIISAL 838
F ++Q P++ G +LE+ +YR+ P YR Q L+ + + +
Sbjct: 598 KGF--ISQLLPTVFKSHAWGTLYTLLEMFSYRMHHIQPHYRVQ-----LLSHLHSLAAVP 650
Query: 839 KVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAI 892
+ + + LRL L + Q F + + S E +E LNR V+ LA
Sbjct: 651 QTNQTQLHLCVESTALRLITGLGSAEVQPQLSRFLSEPKTLVSAE-SEELNRALVLTLAR 709
Query: 893 IIKTRGIADADHV-LYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQ 951
+ G H + + +L IM + H+W+ TL+ FP +L + + + +
Sbjct: 710 SMHVTGTGSDSHSGTWCKELLNTIMQNTPHSWANHTLQCFPPVLSEFF----QQNSVPKE 765
Query: 952 AWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSAN 1011
QQ + V + S S + + + P +LC I+ + + S
Sbjct: 766 NKQQIKKAVEEEYRNWASMSNENDIIAHFSVPGTPP--LFLCLLWKIIFET---DRISPI 820
Query: 1012 LLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLP 1071
++L +++++ D L+ + H + K ++ + + ++
Sbjct: 821 AYKILERIGARALSAHLRKFCDYLVFEFANSVGGQH-----VNKCVDTVNDMIWKYNIVT 875
Query: 1072 LDILLLALIDR-----DDDPHALRIVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKR 1126
+D L+L L+ R D I + LL EL+ R + + + PEHW S
Sbjct: 876 IDRLVLCLVLRTHEGSDAQVCFFIIQLLLLKAIELRNRTQEF-VKENSPEHWKQSNWH-- 932
Query: 1127 VELQKALGNHLSWKERY-------------------PTFFDDIAARLLPVIPLIVYRLIE 1167
+K L H + E++ P +F ++ R LPV ++V+R +E
Sbjct: 933 ---EKHLAFHRKFPEKFAPEGIMEQTSGGPSQYQSLPVYFGNVCLRFLPVFDIVVHRYLE 989
Query: 1168 NDAM-DSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHL---PG---KLIVRILNVFDL 1220
A+ S + +L ++ +++ + L Y+ L PG +L+ +
Sbjct: 990 IPAVSKSLETLLEHLGCLYKFHDRPVTYLYNTLHYYERKLRDRPGMKRRLVTAVFGSLKE 1049
Query: 1221 SKIP---FSESFPQHISSS-NPVMC--PPLDYFATLLLGLVNNVIPALNYNSKSGSTMDA 1274
+ P SE++ +++ S + V+ P LDY+ L+ +V
Sbjct: 1050 IRAPGWALSEAYQMYMTRSIDEVIAWMPELDYYIRLVRRIVE------------------ 1091
Query: 1275 SLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVS 1334
+ SG ++ F + +P + L +E++++PV+A+ + +
Sbjct: 1092 ------------TMSGTAHFPATDWRFNEFPNPAAHA---LYVTCVELMAVPVAANIVAN 1136
Query: 1335 SLVQIVVNIQPTLIQTSNGPYGASNSVG-QGSVLPTSPSGGSTDSLGASRSTPSVSGINT 1393
SL+ +V + + S+ + N VG + LP D L A+ S+P ++ N
Sbjct: 1137 SLLDVVA--KGYTVIPSDEIHLWINCVGLLLAALPECYWSALHDRLVATISSPGLANWNY 1194
Query: 1394 SSF 1396
S+
Sbjct: 1195 SNL 1197
>gi|195026568|ref|XP_001986286.1| GH21275 [Drosophila grimshawi]
gi|193902286|gb|EDW01153.1| GH21275 [Drosophila grimshawi]
Length = 1416
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 138/661 (20%), Positives = 267/661 (40%), Gaps = 85/661 (12%)
Query: 734 SLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQR 792
SL ++L QM +V + A++ETY RL++ SL + L Q
Sbjct: 530 SLTLHSKMSLIHSFVTQMLKQAQSKTLVPAPALIETYARLLVYTEIESL--GIKGFLTQL 587
Query: 793 NPSLLAKVGVTPL--VLEIVNYRLLPL---YRYQGKTKTLMYDITKIISALKVKRG-DHR 846
P++ L ++E+ +YRL + YR Q + + +++ +
Sbjct: 588 LPTVFKNHAWAMLHTLMEMFSYRLHHVPTHYRVQLLSLLYSLSSVPQTNKMQLNLCFEST 647
Query: 847 VLRLAENLCMNLILSQ-RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHV 905
LRL ++ SQ + K G ++ +E LNR+ ++ LA + G D +
Sbjct: 648 ALRLITSIGSAEFQSQFSRHLNDKSPGGVASNESEELNRVLILTLARSMHVHGGGD-ELA 706
Query: 906 LYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCT 965
+ + L IM + H+W ++L FP L + + + QQ + +V +
Sbjct: 707 GWCKDFLSNIMQHTPHSWPLQSLACFPPALNEYFT----QNNHPAENKQQLKKSVEEEYR 762
Query: 966 QLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVT 1025
S S + + +L + + +LC I+ + E+I S ++L S ++
Sbjct: 763 NWTSMSNENDIIAHFLRPN--TNPLFLCLLFKIIWET--ESI-SPVAYKILEGISARALS 817
Query: 1026 SNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDD 1085
+++ D L+ E+ +D + K I+ + ++ +D L+L L R +
Sbjct: 818 THLRKFCDYLV----AEVASSSDGRDFIHKCVDTINNMIWKFNVVTIDRLVLCLALRTHE 873
Query: 1086 PHALRIVITLL-----DRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWK 1140
+ ++ + ++ EL+ RV+ +C + P +HW S +K + H S+
Sbjct: 874 GNEAQVCLIIIQLLLLKATELRNRVQEFCKDNNP-DHWKQSNWH-----EKHISFHQSFP 927
Query: 1141 ERY-----------PTFFDDIAARLLPVIPLIVYRLIE---NDAMDSADRVLATYSSFLA 1186
E++ P +F ++ R LPV+ ++V+R IE + + +L S
Sbjct: 928 EKFAPDESASQIPLPVYFSNVCLRFLPVLDVVVHRFIELTIPNVLQILCIILDHLSILYK 987
Query: 1187 YYPLRFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDY 1246
++ +++ + L Y+ L L+V+ + FSE P + S S+P
Sbjct: 988 FHDRPITYLYNTLHYYERILRDHLVVK-KKLMSAITSAFSEIRPANWSVSDP-------- 1038
Query: 1247 FATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQ--- 1303
+ L G P L+Y M+ R ++ G+ FY
Sbjct: 1039 YKVYLQGQDTLWTPELSY------YMNLIRRL-------------ADTISGKNVFYTTDW 1079
Query: 1304 --NQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSV 1361
N+ P T + T V E+L LP++ S + S++ ++V+ + Q Y N+V
Sbjct: 1080 RFNEFPNAPTHALYVTCV-ELLGLPLAPSVVAGSIIDVIVDGYAVIPQKEIHSY--INAV 1136
Query: 1362 G 1362
G
Sbjct: 1137 G 1137
>gi|410916393|ref|XP_003971671.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Takifugu rubripes]
Length = 1391
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 192/921 (20%), Positives = 358/921 (38%), Gaps = 162/921 (17%)
Query: 505 MISEAVIDRIVELLKLTNSEVNCWHD--------WLIFSDVFFFLVKSGCIDFVDFV--- 553
++ E ++D +V ++ + SE + D W S F V F V
Sbjct: 305 VLEEQLVDLVVYAMERSESEEHFDADVGGTSQLLWQHLSSQLIFFVLFQFASFPHMVLSL 364
Query: 554 -DKLVSR-LQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRKILSFHREDR 611
KL R L G +H++ W+L Q I + AL +D V +L + E
Sbjct: 365 HQKLAGRGLNKGRDHLM------WVLLQFISGSIQKNAL-ADFLPVMKLFDLL--YPEKE 415
Query: 612 CT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ-----KGKQIDEWWRQV 663
C D N PQS F +C IW ++ + + +N +LQ K E+ +Q
Sbjct: 416 CIPVPDINKPQSTH-SFAMTC----IW-IHLNRKAQNDNSKLQIPIPHSLKLHHEFLQQS 469
Query: 664 SKGDRMMDYMNMDDRSVGMFWVVSYTMAQ----PACETVMNWLSSAGVTELFPGSNLPPN 719
+ + M D + + T ++ P V + + PG+N
Sbjct: 470 LRNKSL----GMSDYKIALLCNAYSTNSECFPLPMGALVETIYGNGTMRINLPGTNC--- 522
Query: 720 ERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTRLM 774
M V PLPM+LL +++ + L + + V + A+VETY+RL+
Sbjct: 523 ---MASAAVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSVALAPALVETYSRLL 579
Query: 775 L-LAPHSLFRSLFSHLAQRNPSLLA--KVGVTPLVLEIVNYRL---LPLYRYQGKTKTLM 828
+ + SL + ++Q P++ G+ +LE+ +YR+ P YR Q L+
Sbjct: 580 VYMEIESL--GIKGFISQLLPNVFKCHAWGILHTLLEMFSYRMHHIQPHYRVQ-----LL 632
Query: 829 YDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETL 882
+ + + + + + LRL L + + Q F + S E +E L
Sbjct: 633 SHLHSLAAVPQTNQNQLHLCVESTALRLITALGSSEVQPQFSRFLSDPKTVLSAE-SEEL 691
Query: 883 NRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDAL 939
NR ++ LA +D+ H + + +L+ IM + H W+ TL FP+ L+
Sbjct: 692 NRALILTLARATHVTDFFTGSDSIHGTWCKDILQTIMNFTPHNWASHTLSCFPAPLQ--- 748
Query: 940 IGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWIL 999
+ + ++ + V + + S + + + + P +LC +L
Sbjct: 749 -AFFKQNNVPQESRFNLKKNVEEEYRKWKSMANENDIITHFSMQGSPP--LFLCLLWKML 805
Query: 1000 MQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACAN 1059
++ ++IN RVL + +++ T D L++ E Q L C
Sbjct: 806 LET--DHINQIG-FRVLERIGARALVAHVRTFADFLVY----EFSTSAGGQQL--NKCIE 856
Query: 1060 I-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCMNRG 1113
I + V + ++ LD L+L L R + + ++ + LL + + RV + +
Sbjct: 857 ILNDMVWKYNIVTLDRLILCLAMRSHENNEAQVCYFIIQLLLLKPNDFRNRVNDF-VKEN 915
Query: 1114 PPEHWLYSGLF-KRVELQKALGNHLSWK--------------ERYPTFFDDIAARLLPVI 1158
PEHWL S K + K L ++ + P +F ++ R LPV
Sbjct: 916 APEHWLQSDWHNKHMNYHKKYPEKLYFEGLAEQVNPPMQLQPQYLPIYFGNVCLRFLPVF 975
Query: 1159 PLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYF------YGHLPGKLI 1211
++++R +E S + +L S ++ +++ + L Y+ +L KL+
Sbjct: 976 DIVIHRFLELLPVSKSLETLLDHLGSLYKFHDRPVTYLYNTLHYYERQLRDRTNLKRKLV 1035
Query: 1212 VRILNVFDLSKIP---FSESFPQHISSSNP----VMCPPLDYFATLLLGLVNNVIPALNY 1264
I++ ++ P SE++ + NP V P Y+ L+ LV+ +
Sbjct: 1036 HAIMSSLKDNRSPGWCLSETYLKF--GINPREDNVWIPDDTYYCKLIGRLVDTMA----- 1088
Query: 1265 NSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILS 1324
KSP GP + R F + +P + L +E+++
Sbjct: 1089 ----------------GKSP-----GPFPNCDWR--FNEFPNPAAHA---LHVTCVELMA 1122
Query: 1325 LPVSASQIVSSLVQIVVNIQP 1345
L V + ++L+ +V+ QP
Sbjct: 1123 LAVPGKDVGNALLNVVLKSQP 1143
>gi|449497499|ref|XP_002192529.2| PREDICTED: mediator of RNA polymerase II transcription subunit 23
[Taeniopygia guttata]
Length = 1377
Score = 64.7 bits (156), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 154/740 (20%), Positives = 290/740 (39%), Gaps = 118/740 (15%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 338 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 396
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + + +N +
Sbjct: 397 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAHSDNSK 449
Query: 650 LQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQ----PACETVMN 700
LQ K E+ +Q + + M+D + + T ++ P V
Sbjct: 450 LQIPIPHSLKLHHEFLQQSLRNKNL----QMNDYKIALLCNAYSTNSECFTLPMGVLVET 505
Query: 701 WLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG--- 757
+ + PG+N M + PLPM+LL +++ + L + +
Sbjct: 506 IYGNGNMRTPLPGTNC------MASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAH 559
Query: 758 --GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNY 812
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +Y
Sbjct: 560 AKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSY 617
Query: 813 RL---LPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLA-ENLCMNLILS------Q 862
R+ P YR Q ++ + S V + + L L E+ + LI + Q
Sbjct: 618 RMHHIQPHYRVQL--------LSHLHSLAAVPQTNQNQLHLCVESTALRLITALGSSEVQ 669
Query: 863 RDFFSLKREGKG--STEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMA 917
F + K S E +E LNR ++ LA +D+ + + +L+ IM+
Sbjct: 670 PQFTRFLNDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMS 728
Query: 918 TSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYV 977
+ H W+ TL FP+ L+ + + ++ + V + + S +++ +
Sbjct: 729 FTPHNWASHTLSCFPAPLQVFF----KQNNVPQESRFNLKKNVEEEYRKWKSMTSENEII 784
Query: 978 KTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLH 1037
+ + +LC +L+ ++IN RVL + +++ T D L++
Sbjct: 785 THFSAQG--SSPLFLCLLWKMLLDT--DHINQIG-YRVLERIGARALVAHVRTFADFLVY 839
Query: 1038 HIHVELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV---- 1092
E Q L C I + V + ++ LD L+L L R + + ++
Sbjct: 840 ----EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFII 893
Query: 1093 -ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-------- 1143
+ LL + + RV + + PEHWL + + H+S+ ++Y
Sbjct: 894 QLLLLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMSYHKKYPEKLYFEG 943
Query: 1144 ----------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLA 1186
P +F ++ R LPV ++++R +E S + +L
Sbjct: 944 LAEQVNPPVQIQPQYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYK 1003
Query: 1187 YYPLRFSFVRDILAYFYGHL 1206
++ +++ + L Y+ GHL
Sbjct: 1004 FHDRPVTYLYNTLHYYEGHL 1023
>gi|157138530|ref|XP_001664240.1| mediator complex, 155kD-subunit, putative [Aedes aegypti]
gi|121954381|sp|Q16HH9.1|MED23_AEDAE RecName: Full=Mediator of RNA polymerase II transcription subunit 23;
AltName: Full=Mediator complex subunit 23
gi|108869479|gb|EAT33704.1| AAEL014021-PA [Aedes aegypti]
Length = 1409
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 141/680 (20%), Positives = 266/680 (39%), Gaps = 124/680 (18%)
Query: 765 AMVETYTRLMLLAP-HSLFRSLFSHLAQRNPSLL--AKVGVTPLVLEIVNYRL---LPLY 818
A+VETY+RL++ SL F L Q P + A G+ +LE+ +YR+ P Y
Sbjct: 577 ALVETYSRLLVYTEIESLGIKGF--LGQLLPQVFKSAAWGILYTLLEMFSYRMHHIQPHY 634
Query: 819 RYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREG 872
R Q L+ + + S + + LRL L + +Q + +++
Sbjct: 635 RVQ-----LLSHLHSLASVPHTNQMQLHSCVESTALRLITGLGSVEVQAQMSRYVTEQKA 689
Query: 873 KGS--TEFTETLNRITVIALAIIIKTRGIA-DADHVLYLQTMLEQIMATSQHTWSEKTLR 929
G+ + +E LNR ++ LA ++ G D + + +L IM + HTWS+ TL+
Sbjct: 690 PGNIVSAESEELNRALILTLARSMQITGTGNDPQSTTWCKELLNSIMQNTPHTWSQHTLQ 749
Query: 930 YFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVK-TYLSHSFPQH 988
FP +L D ++ + V + QLL S D Y T +S+
Sbjct: 750 CFPPVLNDLVV----------------QHNVPKENKQLLKKSVDEEYRNWTSMSNENDII 793
Query: 989 RQYLCAGA--------WILMQGHPE-NINSANLLRVLREFSPEEVTSNIYTMVDVLLHHI 1039
+ AG +L + E + S ++L +++++ + D L+ +
Sbjct: 794 GHFGTAGTPGTPPLFLCLLFKMIVETDTISPVAYKILERIGARALSAHLRKLCDYLVFEV 853
Query: 1040 HVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALR-----IVIT 1094
H + K I+ + + ++ +D L+L L R + + + I +
Sbjct: 854 SNSGDGAH-----VNKCVDTINDMIWKYNIITIDRLVLCLSLRTLEGNEAQVSFCIIQLL 908
Query: 1095 LLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY----------- 1143
LL E + R++ + ++ PEHW + +R L H + E++
Sbjct: 909 LLKTSEFRNRLQEF-VSINSPEHWKQNNWHER-----HLAFHQKFPEKFTPDESVSHPSL 962
Query: 1144 PTFFDDIAARLLPVIPLIVYRLIENDAMDSA--DRVLATYSSFLAYYPLRFSFVRDILAY 1201
P +F ++ R LPV+ + ++R +E A S D +L ++ +++ + L Y
Sbjct: 963 PVYFGNVCLRFLPVLDITIHRYLEVPAAMSKTLDVLLDHLGPLYKFHDRPITYLYNTLHY 1022
Query: 1202 F----------YGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLL 1251
+ L G +I + +V +E + ++S + +
Sbjct: 1023 YERMLRDRPQLKKRLVGTVIGSLKDVRP-DNWAVTEQYQSYMSKKDDAV----------- 1070
Query: 1252 LGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRK-EFYQNQDPGTY 1310
N +P LNY M ++ +N+ G F + +P +
Sbjct: 1071 -----NWMPDLNYYIYLVRRMQDTIDG-------------TNIFPGTDWRFNEFPNPPAH 1112
Query: 1311 TQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQ-GSVLPT 1369
L +E+L LPV + +SL+ +VV P + S + N++G + LP
Sbjct: 1113 A---LYVTCVELLGLPVGPQGVANSLIDVVVKGYPVI--PSQSVHNWINTIGLIMAALPE 1167
Query: 1370 SPSGGSTDSLGASRSTPSVS 1389
S G + L S P ++
Sbjct: 1168 SYWGVIYERLREVISCPQMT 1187
>gi|326915935|ref|XP_003204267.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like isoform 2 [Meleagris gallopavo]
Length = 1376
Score = 63.9 bits (154), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 154/741 (20%), Positives = 291/741 (39%), Gaps = 120/741 (16%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 337 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 395
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 647
+D V +L + E C D N PQS F +C IW ++ + + + +N
Sbjct: 396 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAHSDN 446
Query: 648 EQLQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQ----PACETV 698
+LQ K E+ +Q + + M+D + + T ++ P V
Sbjct: 447 SKLQIPIPHSLKHHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSECFTLPMGVLV 502
Query: 699 MNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG- 757
+ + PG+N M + PLPM+LL +++ + L + +
Sbjct: 503 ETIYGNGNMRISLPGTNC------MASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKL 556
Query: 758 ----GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIV 810
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+
Sbjct: 557 AHAKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMF 614
Query: 811 NYRL---LPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILS------ 861
+YR+ P YR Q L+ + + A +R +++ E+ + LI +
Sbjct: 615 SYRMHHIQPHYRVQ-----LLSHLHSL--AAVPQRNQNQLHLCVESTALRLITALGSSEV 667
Query: 862 QRDFFSLKREGKG--STEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIM 916
Q F + K S E +E LNR ++ LA +D+ + + +L+ IM
Sbjct: 668 QPQFTRFLSDPKSVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIM 726
Query: 917 ATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTY 976
+ + H W+ TL FP+ L+ + + ++ + V + + S + +
Sbjct: 727 SFTPHNWASHTLSCFPAPLQVFF----KQNNVPQESRFNLKKNVEEEYRKWKSMTNENEI 782
Query: 977 VKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLL 1036
+ + P +LC +L++ ++IN RVL + +++ T D L+
Sbjct: 783 ITRFSVQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLV 837
Query: 1037 HHIHVELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV--- 1092
+ E Q L C I + V + ++ LD L+L L R + + ++
Sbjct: 838 Y----EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFI 891
Query: 1093 --ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------- 1143
+ LL + + RV + + PEHWL + + H+S+ ++Y
Sbjct: 892 IQLLLLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMSYHKKYPEKLYFE 941
Query: 1144 -----------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFL 1185
P +F ++ R LPV ++++R +E S + +L
Sbjct: 942 GLAEQVNPPVQIQPQYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLY 1001
Query: 1186 AYYPLRFSFVRDILAYFYGHL 1206
++ +++ + L Y+ HL
Sbjct: 1002 KFHDRPVTYLYNTLHYYERHL 1022
>gi|326915933|ref|XP_003204266.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like isoform 1 [Meleagris gallopavo]
Length = 1370
Score = 63.5 bits (153), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 154/741 (20%), Positives = 291/741 (39%), Gaps = 120/741 (16%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 647
+D V +L + E C D N PQS F +C IW ++ + + + +N
Sbjct: 390 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAHSDN 440
Query: 648 EQLQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQ----PACETV 698
+LQ K E+ +Q + + M+D + + T ++ P V
Sbjct: 441 SKLQIPIPHSLKHHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSECFTLPMGVLV 496
Query: 699 MNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG- 757
+ + PG+N M + PLPM+LL +++ + L + +
Sbjct: 497 ETIYGNGNMRISLPGTNC------MASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKL 550
Query: 758 ----GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIV 810
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+
Sbjct: 551 AHAKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMF 608
Query: 811 NYRL---LPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILS------ 861
+YR+ P YR Q L+ + + A +R +++ E+ + LI +
Sbjct: 609 SYRMHHIQPHYRVQ-----LLSHLHSL--AAVPQRNQNQLHLCVESTALRLITALGSSEV 661
Query: 862 QRDFFSLKREGKG--STEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIM 916
Q F + K S E +E LNR ++ LA +D+ + + +L+ IM
Sbjct: 662 QPQFTRFLSDPKSVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIM 720
Query: 917 ATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTY 976
+ + H W+ TL FP+ L+ + + ++ + V + + S + +
Sbjct: 721 SFTPHNWASHTLSCFPAPLQVFF----KQNNVPQESRFNLKKNVEEEYRKWKSMTNENEI 776
Query: 977 VKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLL 1036
+ + P +LC +L++ ++IN RVL + +++ T D L+
Sbjct: 777 ITRFSVQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLV 831
Query: 1037 HHIHVELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV--- 1092
+ E Q L C I + V + ++ LD L+L L R + + ++
Sbjct: 832 Y----EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFI 885
Query: 1093 --ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------- 1143
+ LL + + RV + + PEHWL + + H+S+ ++Y
Sbjct: 886 IQLLLLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMSYHKKYPEKLYFE 935
Query: 1144 -----------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFL 1185
P +F ++ R LPV ++++R +E S + +L
Sbjct: 936 GLAEQVNPPVQIQPQYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLY 995
Query: 1186 AYYPLRFSFVRDILAYFYGHL 1206
++ +++ + L Y+ HL
Sbjct: 996 KFHDRPVTYLYNTLHYYERHL 1016
>gi|196008223|ref|XP_002113977.1| hypothetical protein TRIADDRAFT_28077 [Trichoplax adhaerens]
gi|190582996|gb|EDV23067.1| hypothetical protein TRIADDRAFT_28077 [Trichoplax adhaerens]
Length = 1305
Score = 63.5 bits (153), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 121/571 (21%), Positives = 229/571 (40%), Gaps = 130/571 (22%)
Query: 765 AMVETYTRLMLLAPHSLFR------SLFSHLAQRNPSLLAKVGVTPLVLEIVNYRLLPL- 817
A+VETY+R+++ LF LF + + N +LEI++YRL +
Sbjct: 512 AVVETYSRILICNEVELFGIKQFVGQLFLQIVKSNAW-----NFLHAMLEILSYRLHHIQ 566
Query: 818 --YRYQGKTKTLMYDITKIISALKVKRGDHRVLRLA-ENLCMNLI--LSQRDFF-SLKRE 871
YR+Q + I + + + + + L+L+ EN + LI LS D + L R
Sbjct: 567 AHYRFQL--------LPHIYTLSGMSQTNTQQLQLSIENSALRLISGLSSCDVYPELSRS 618
Query: 872 GKGS---TEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTL 928
++ +E LN+ V+ LA + G+ ++ + +L+ +L QIM + H W TL
Sbjct: 619 PNPEQLLSQESEELNKAFVLMLARAMHVTGL-ESPYGNWLENILRQIMEATPHCWPSHTL 677
Query: 929 RYFPSLLRD-------------ALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPT 975
+ FP+ + L ++D+ T ++ + ET +N TQ + +
Sbjct: 678 QCFPAPFKTFYNTHRHTPDSKATLRTKVDEEYRTWKSMGENET--VNYFTQQNTSNV--- 732
Query: 976 YVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVL 1035
+LC +L++ N S+ R+L + +S+I D +
Sbjct: 733 ---------------FLCVMWRLLLET---NRLSSVCYRILERIGAKRWSSHIRVFADFI 774
Query: 1036 LHHIHVELQRGHS------LQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHAL 1089
++ H+ L DL++K + ++ LD L+L L R + +
Sbjct: 775 VYEFSSAAGSRHASKCIQILNDLIWK-----------YNVVTLDRLILYLALRSHEGNEA 823
Query: 1090 RIV-----ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY- 1143
++ + LL E + RV + + P HW + + +K + H W E++
Sbjct: 824 QVCFFIIQLLLLKPAEFRTRVNSFVRDNSPC-HWKQNDYY-----EKHMNYHRRWTEKFY 877
Query: 1144 -------------------PTFFDDIAARLLPVIPLIVYRLIENDAM-DSADRVLATYSS 1183
P +F ++ R +PV+ ++++R IE + S + VL
Sbjct: 878 FEGLQELSQSLPTSVNHYLPIYFGNVCLRFIPVLDIVIHRFIEMPPVSKSLETVLDHLGC 937
Query: 1184 FLAYYPLRFSFVRDILAYFYGHL------PGKLIVRILNVFDLSKIPF-----SESFPQH 1232
++ +++ D L Y+ HL KL+ I F I F S+ F +
Sbjct: 938 LYKFHDRPITYLYDTLHYYEKHLINYPQIKKKLVGTITGNFHKYTIQFLLLYLSDGFQSY 997
Query: 1233 ISS----SNPVMCPPLDYFATLLLGLVNNVI 1259
+S P Y+ L+ L+N+++
Sbjct: 998 LSHVEEPDREPWKPTKTYYQDLVRRLINDIL 1028
>gi|312382114|gb|EFR27677.1| hypothetical protein AND_05476 [Anopheles darlingi]
Length = 1489
Score = 63.5 bits (153), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 114/532 (21%), Positives = 227/532 (42%), Gaps = 55/532 (10%)
Query: 733 MSLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQ 791
MSL+ +++ +K A Q + SI G +A A+VETY+RL++ SL F L Q
Sbjct: 556 MSLIHSIVMHM-IKQA-QNKSSIPNGNNMAP-ALVETYSRLLVYTEIESLGIKGF--LGQ 610
Query: 792 RNPSLLAK--VGVTPLVLEIVNYRLLPLY-RYQGKTKTLMYDITKIISALKVKRG---DH 845
P + G+ +LE+ +YR+ ++ Y+ + T ++ + + +++ +
Sbjct: 611 LLPQVFKSHAWGILYTLLEMFSYRMHHIHSHYRVQLLTHLHSLASVPHTNQMQLHSCVES 670
Query: 846 RVLRLAENLCMNLILSQ--RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI-ADA 902
LRL L + +Q R K G + +E LNR ++ LA + G +D
Sbjct: 671 TALRLIIGLGSVEVQAQLSRYVSEPKPPGNIVSAESEELNRALILTLARSMHITGTGSDP 730
Query: 903 DHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVIN 962
+ + +L+ IM + H W + TL FP +L + + + + ++ Q + TV
Sbjct: 731 QSSAWCKDLLQNIMVNTPHAWPQHTLLCFPQVLNEFFM----QHNIPKESKQLLKKTVDE 786
Query: 963 QCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPE 1022
+ S + + + + P +LC ++++ + S ++L
Sbjct: 787 EFRNWASMTNENDIIAHFGMAVNPP--LFLCLVFKMIIET---DAISPVAYKILERIGAR 841
Query: 1023 EVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDR 1082
+++++ + D LL + H + K I+ + + ++ +D L+L LI R
Sbjct: 842 ALSTHLRKLCDYLLFEVANSGGGAH-----VNKCVDTINDMIWKYNIVTIDRLVLCLILR 896
Query: 1083 DDDPHALR-----IVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHL 1137
D + + I + LL E + RV+ + + PEHW + +R L H
Sbjct: 897 TLDGNEAQVSFYIIQLLLLKTSEFRNRVQEF-ITINSPEHWKQNNWHER-----HLAFHQ 950
Query: 1138 SWKERY-----------PTFFDDIAARLLPVIPLIVYRLIE--NDAMDSADRVLATYSSF 1184
+ E++ P +F ++ R LPV+ +IV+R +E + D +L S
Sbjct: 951 KFPEKFAPDESVSHPTLPVYFGNVCLRFLPVLDIIVHRYLEVPTQLSKTLDVILDHLGSL 1010
Query: 1185 LAYYPLRFSFVRDILAYFYGHLPGK--LIVRILNVFDLSKIPFSESFPQHIS 1234
++ +++ + L Y+ L + L R+++ + P P H+S
Sbjct: 1011 YKFHDRPITYLYNTLHYYEVKLRDRPLLKKRLVSTKRSEESPIPAKSPLHVS 1062
>gi|363731985|ref|XP_003641044.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 1 [Gallus gallus]
Length = 1377
Score = 63.5 bits (153), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 154/741 (20%), Positives = 291/741 (39%), Gaps = 120/741 (16%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 338 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 396
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 647
+D V +L + E C D N PQS F +C IW ++ + + + +N
Sbjct: 397 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAHSDN 447
Query: 648 EQLQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQ----PACETV 698
+LQ K E+ +Q + + M+D + + T ++ P V
Sbjct: 448 SKLQIPIPHSLKHHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSECFTLPMGVLV 503
Query: 699 MNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG- 757
+ + PG+N M + PLPM+LL +++ + L + +
Sbjct: 504 ETIYGNGNMRISLPGTNC------MASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKL 557
Query: 758 ----GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIV 810
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+
Sbjct: 558 AHAKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMF 615
Query: 811 NYRL---LPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILS------ 861
+YR+ P YR Q L+ + + A +R +++ E+ + LI +
Sbjct: 616 SYRMHHIQPHYRVQ-----LLSHLHSL--AAVPQRNQNQLHLCVESTALRLITALGSSEV 668
Query: 862 QRDFFSLKREGKG--STEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIM 916
Q F + K S E +E LNR ++ LA +D+ + + +L+ IM
Sbjct: 669 QPQFTRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIM 727
Query: 917 ATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTY 976
+ + H W+ TL FP+ L+ + + ++ + V + + S + +
Sbjct: 728 SFTPHNWASHTLSCFPAPLQVFF----KQNNVPQESRFNLKKNVEEEYRKWKSMTNENEI 783
Query: 977 VKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLL 1036
+ + P +LC +L++ ++IN RVL + +++ T D L+
Sbjct: 784 ITRFSVQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLV 838
Query: 1037 HHIHVELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV--- 1092
+ E Q L C I + V + ++ LD L+L L R + + ++
Sbjct: 839 Y----EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFI 892
Query: 1093 --ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------- 1143
+ LL + + RV + + PEHWL + + H+S+ ++Y
Sbjct: 893 IQLLLLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMSYHKKYPEKLYFE 942
Query: 1144 -----------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFL 1185
P +F ++ R LPV ++++R +E S + +L
Sbjct: 943 GLAEQVNPPVQIQPQYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLY 1002
Query: 1186 AYYPLRFSFVRDILAYFYGHL 1206
++ +++ + L Y+ HL
Sbjct: 1003 KFHDRPVTYLYNTLHYYERHL 1023
>gi|363731983|ref|XP_424537.3| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 2 [Gallus gallus]
Length = 1383
Score = 63.5 bits (153), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 154/741 (20%), Positives = 291/741 (39%), Gaps = 120/741 (16%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 344 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 402
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 647
+D V +L + E C D N PQS F +C IW ++ + + + +N
Sbjct: 403 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAHSDN 453
Query: 648 EQLQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQ----PACETV 698
+LQ K E+ +Q + + M+D + + T ++ P V
Sbjct: 454 SKLQIPIPHSLKHHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSECFTLPMGVLV 509
Query: 699 MNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG- 757
+ + PG+N M + PLPM+LL +++ + L + +
Sbjct: 510 ETIYGNGNMRISLPGTNC------MASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKL 563
Query: 758 ----GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIV 810
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+
Sbjct: 564 AHAKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMF 621
Query: 811 NYRL---LPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILS------ 861
+YR+ P YR Q L+ + + A +R +++ E+ + LI +
Sbjct: 622 SYRMHHIQPHYRVQ-----LLSHLHSL--AAVPQRNQNQLHLCVESTALRLITALGSSEV 674
Query: 862 QRDFFSLKREGKG--STEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIM 916
Q F + K S E +E LNR ++ LA +D+ + + +L+ IM
Sbjct: 675 QPQFTRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIM 733
Query: 917 ATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTY 976
+ + H W+ TL FP+ L+ + + ++ + V + + S + +
Sbjct: 734 SFTPHNWASHTLSCFPAPLQVFF----KQNNVPQESRFNLKKNVEEEYRKWKSMTNENEI 789
Query: 977 VKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLL 1036
+ + P +LC +L++ ++IN RVL + +++ T D L+
Sbjct: 790 ITRFSVQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLV 844
Query: 1037 HHIHVELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV--- 1092
+ E Q L C I + V + ++ LD L+L L R + + ++
Sbjct: 845 Y----EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFI 898
Query: 1093 --ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------- 1143
+ LL + + RV + + PEHWL + + H+S+ ++Y
Sbjct: 899 IQLLLLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMSYHKKYPEKLYFE 948
Query: 1144 -----------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFL 1185
P +F ++ R LPV ++++R +E S + +L
Sbjct: 949 GLAEQVNPPVQIQPQYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLY 1008
Query: 1186 AYYPLRFSFVRDILAYFYGHL 1206
++ +++ + L Y+ HL
Sbjct: 1009 KFHDRPVTYLYNTLHYYERHL 1029
>gi|158295231|ref|XP_316095.4| AGAP006046-PA [Anopheles gambiae str. PEST]
gi|157015936|gb|EAA11662.5| AGAP006046-PA [Anopheles gambiae str. PEST]
Length = 1450
Score = 63.5 bits (153), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 139/672 (20%), Positives = 272/672 (40%), Gaps = 104/672 (15%)
Query: 733 MSLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQ 791
MSL+ +++ +K A Q + SI G +A A+VETY+RL++ SL + L Q
Sbjct: 552 MSLIHSIVMHM-IKQA-QNKSSIPNGNNMAP-ALVETYSRLLVYTEIESL--GIKGFLGQ 606
Query: 792 RNPSLLAKV--GVTPLVLEIVNYRLLPLY-RYQGKTKTLMYDITKIISALKVKRG---DH 845
P + G+ +LE+ +YR+ ++ Y+ + T ++ + + +++ +
Sbjct: 607 LLPQVFKSQAWGILYTLLEMFSYRMHHIHSHYRVQLLTHLHSLASVPHTNQMQLHSCVES 666
Query: 846 RVLRLAENLCMNLILSQ--RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIA-DA 902
LRL L + +Q R K G + +E LNR ++ LA + G D
Sbjct: 667 TALRLIIGLGSVEVQAQLSRYVSEPKPPGNIVSGESEELNRALILTLARSMHITGTGNDP 726
Query: 903 DHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVIN 962
+ + +L+ IM + H W + TL FP +L + + + + ++ Q + TV
Sbjct: 727 QSSAWCKDLLQNIMVNTPHAWPQHTLYCFPPVLNEFFM----QHNIPKESKQLLKKTVDE 782
Query: 963 QCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPE 1022
+ S + + + + P +LC ++++ + I S ++L
Sbjct: 783 EYRNWASMTNENDIIAHFGMTVNPP--LFLCLVFKMIIET--DGI-SPVAYKILERIGAR 837
Query: 1023 EVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDR 1082
+++++ M D LL + H + K I+ + + ++ +D L+L LI R
Sbjct: 838 ALSTHLRKMCDYLLFEVANSGGGAH-----VNKCVDTINDMIWKYNIITIDRLVLCLILR 892
Query: 1083 DDDPHALR-----IVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHL 1137
D + + I + LL E + RV+ + + PEHW + +R L H
Sbjct: 893 TLDGNEAQVSFYIIQLLLLKTTEFRNRVQEF-ITINSPEHWKQNNWHER-----HLAFHQ 946
Query: 1138 SWKERY-----------PTFFDDIAARLLPVIPLIVYRLIE--NDAMDSADRVLATYSSF 1184
+ E++ P +F ++ R LPV+ +IV+R +E + D +L S
Sbjct: 947 KFPEKFAPDESVSHPSLPVYFGNVCLRFLPVLDIIVHRYLEVPTQLSKTLDVILDHLGSL 1006
Query: 1185 LAYYPLRFSFVRDILAYFYGHLPGK---------LIVRILNVFDLSKIPFSESFPQHI-- 1233
++ +++ + L Y+ L + +V L +E++ ++
Sbjct: 1007 YKFHDRPITYLYNTLHYYERKLRDRPQLKKRLVGTVVGSLKDVRPENWALTEAYQAYMMT 1066
Query: 1234 -SSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPS 1292
S N P L Y+ L+ + TMD
Sbjct: 1067 KESDNVNWVPELSYYINLV--------------RRMQDTMDG-----------------K 1095
Query: 1293 NVSEGRK-EFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTS 1351
N+ G F + +P + L +E+L LPV S + +S++ ++V P +
Sbjct: 1096 NIFAGTDWRFNEFPNPPAHA---LYVTCVELLGLPVGPSVVANSIIDVLVKGYPVV---P 1149
Query: 1352 NGP-YGASNSVG 1362
NG + +N++G
Sbjct: 1150 NGVIHNWANTIG 1161
>gi|345479683|ref|XP_001601017.2| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Nasonia vitripennis]
Length = 1358
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 132/671 (19%), Positives = 264/671 (39%), Gaps = 123/671 (18%)
Query: 730 PLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASI-----AMVETYTRLMLLAP--HSLF 782
PLPMS+L ++++ + L + + S A+VETY+RL++ +
Sbjct: 538 PLPMSILDSLTVHVKMSLIHSILTHVAKSASTKSNLPLPPALVETYSRLLVYTEIENIGI 597
Query: 783 RSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKIISA 837
+ SHL P++ G+ +L++ +YR+ P YR Q ++ + S
Sbjct: 598 KKFISHLL---PTVFKAHAWGILYTLLDMFSYRMHHIQPTYRVQI--------LSHLHSL 646
Query: 838 LKVKRGDHRVLRLA-ENLCMNLILS------QRDFFSLKREGKG-STEFTETLNRITVIA 889
V + + L L E+ + LI Q E K + +E LNR V+
Sbjct: 647 ASVPQTNQTQLHLCVESTALRLITGLGSAEVQPHLSKFLSEPKTLVSADSEELNRALVLT 706
Query: 890 LAI---IIKTRGIADAD-HVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDK 945
+A I T G + D + ++ + +L IM + H+W+E TLR FP L + +
Sbjct: 707 IARSMHITGTGGDTNRDVNSIWCKDLLNTIMQNTPHSWAEHTLRCFPPALSEFF----QQ 762
Query: 946 RGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPE 1005
+ + QQ + V + S S + + + S P W ++ +
Sbjct: 763 NSIPKEEKQQIKKAVEEEYRNWASMSNENDIIAHF---SVPNSAPLFLCLIWKMIL-ETD 818
Query: 1006 NINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVL 1065
+N + ++L +++++ D ++ + G + K+ I+ +
Sbjct: 819 RVNPI-VYKILERIGARALSAHVRKFCDYIVFEVSSTAADGIYVN----KSVDAINHMIW 873
Query: 1066 THELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCMNRGPPEHWLY 1120
+ ++ D L+L L R + + ++ + LL E + RV + + P+HW
Sbjct: 874 KYNIVTFDRLVLCLALRTLEGNEAQVCFFIIQLLLLKATEFRNRVVEF-VKENSPDHWKQ 932
Query: 1121 SGLFKRVELQKALGNHLSWKER-------------------YPTFFDDIAARLLPVIPLI 1161
S +K L H + E+ +P +F ++ R LPV+ ++
Sbjct: 933 SNWH-----EKHLAFHKKFPEKFAPEGMMDQSSGSPNQYQSFPAYFGNVCLRFLPVLDIV 987
Query: 1162 VYRLIENDAMDSADRVLATYSSFLAYYPLR-FSFVRDILAYF------YGHLPGKLIVRI 1214
++R +E + + VL + L + R +++ + L Y+ L +L+ I
Sbjct: 988 MHRYLEVPQVTKSLEVLLDHLGCLYRFHDRPVTYLYNTLHYYERKLRDQHFLKRRLVTAI 1047
Query: 1215 LNVFDLSKIP---FSESFPQHI--SSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSG 1269
L + P SE++ ++ S+ + P LDY+ L+ LV +
Sbjct: 1048 LGSLKEIRAPGWALSEAYQRYTARSTDDVKWQPELDYYVRLVQRLVETI----------- 1096
Query: 1270 STMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSA 1329
SG + F + +P +T L +E+++LPV+
Sbjct: 1097 -------------------SGRAQFPSTDWRFNEFPNPTAHT---LYVTCVELMALPVAP 1134
Query: 1330 SQIVSSLVQIV 1340
+ + ++L+ +V
Sbjct: 1135 NVVANNLLDVV 1145
>gi|51591889|ref|NP_001003990.1| mediator of RNA polymerase II transcription subunit 23 [Danio rerio]
gi|51330079|gb|AAH80264.1| Cofactor required for Sp1 transcriptional activation, subunit 3
[Danio rerio]
Length = 1352
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 184/883 (20%), Positives = 341/883 (38%), Gaps = 146/883 (16%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 307 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 365
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 647
D V +L + E C D N PQS F +C IW ++ + + +N
Sbjct: 366 G-DFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDN 416
Query: 648 EQLQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQ----PACETV 698
+LQ K E+ +Q + + M D + + T ++ P V
Sbjct: 417 SKLQIPIPHSLKLHHEFLQQSLRNKSL----PMTDYKIALLCNAYSTNSECFTLPMGVLV 472
Query: 699 MNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG- 757
+ + PG+N M V PLPM+LL +++ + L + +
Sbjct: 473 ETIYGNGSMRITLPGTNC------MASGSVTPLPMNLLDSLTVHAKMSLIHSIATRVIKL 526
Query: 758 ----GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIV 810
+ + A+VETY+RL++ + SL + ++Q P++ G+ +LE+
Sbjct: 527 AHAKSSLALAPALVETYSRLLVYMEIESL--GIKGFISQLLPNVFKSHAWGILHTLLEMF 584
Query: 811 NYRL---LPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLA-ENLCMNLILS----- 861
+YR+ P YR Q ++ + S V + + L L E+ + LI +
Sbjct: 585 SYRMHHIQPHYRVQL--------LSHLHSLAAVPQTNQNQLHLCVESTALRLITALGSSE 636
Query: 862 -QRDFFSLKREGKG--STEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQI 915
Q F + K S E +E LNR ++ LA +D+ + + +L+ I
Sbjct: 637 VQPQFTRFLNDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTI 695
Query: 916 MATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPT 975
M + H W+ TL FP+ L+ + + ++ + V + + S + +
Sbjct: 696 MNFTPHNWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNEND 751
Query: 976 YVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVL 1035
+ + P +LC +L++ ++IN RVL + +++ T D L
Sbjct: 752 IITHFSMQGSPP--LFLCLLWKMLLET--DHINQIG-FRVLERIGARALVAHVRTFADFL 806
Query: 1036 LHHIHVELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-- 1092
++ E Q L C I + V + ++ LD L+L L R + + ++
Sbjct: 807 VY----EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYF 860
Query: 1093 ---ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLF-KRVELQKALGNHLSWK-------- 1140
+ LL + + RV + + PEHWL S K + K L ++
Sbjct: 861 IIQLLLLKPNDFRNRVSDF-VKENAPEHWLQSDWHTKHMTYHKKYPEKLYFEGLAEQVNP 919
Query: 1141 ------ERYPTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFS 1193
+ P +F ++ R LPV ++++R +E S + +L ++ +
Sbjct: 920 PIQLQSQYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVT 979
Query: 1194 FVRDILAYFYGH------LPGKLIVRILNVFDLSKIP---FSESFPQ--HISSSNPVMCP 1242
++ + L Y+ H L KL+ I++ ++ P SE++ + + + V P
Sbjct: 980 YLYNTLHYYERHLRDRTNLKRKLVHAIMSSLKDNRTPGWCLSETYLKCGMNAREDNVWIP 1039
Query: 1243 PLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFY 1302
Y+ L+ LV+ + KSP GP + R F
Sbjct: 1040 DDTYYCKLIGRLVDTMA---------------------GKSP-----GPFPNCDWR--FN 1071
Query: 1303 QNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
+ +P + L +E+++L V + ++L+ +V+ QP
Sbjct: 1072 EFPNPAAHA---LHVTCVELMALAVPGKDVGNALLNVVLKSQP 1111
>gi|355562062|gb|EHH18694.1| hypothetical protein EGK_15351 [Macaca mulatta]
Length = 1368
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 134/679 (19%), Positives = 269/679 (39%), Gaps = 104/679 (15%)
Query: 718 PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTR 772
P M + PLPM+LL +++ + L + + V + A+VETY+R
Sbjct: 510 PGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSVALAPALVETYSR 569
Query: 773 LML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKT 826
L++ + SL + ++Q P++ G+ +LE+ +YR+ P YR Q
Sbjct: 570 LLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQ----- 622
Query: 827 LMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTE 880
L+ + + + + + + LRL L + + Q F + S E +E
Sbjct: 623 LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFLSDPKTVLSAE-SE 681
Query: 881 TLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRD 937
LNR ++ LA +D+ + + +L+ IM+ + H W+ TL FP L+
Sbjct: 682 ELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNWASHTLSCFPGPLQ- 740
Query: 938 ALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAW 997
+ + ++ + V + + S S + + + P +LC
Sbjct: 741 ---AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQGSPP--LFLCLLWK 795
Query: 998 ILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKAC 1057
+L++ ++IN RVL + +++ T D L++ G L K
Sbjct: 796 MLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS-AGGQQLN----KCI 847
Query: 1058 ANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCMNR 1112
++ V + ++ LD L+L L R + + ++ + LL + + RV + +
Sbjct: 848 EILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVSDF-VKE 906
Query: 1113 GPPEHWLYSGLFKRVELQKALGNHLSWKERY------------------------PTFFD 1148
PEHWL + + H+S+ ++Y P +F
Sbjct: 907 NSPEHWLQNDWHTK---------HMSYHKKYPEKLYFEGLAEQVDPPVQIQSPYLPIYFG 957
Query: 1149 DIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHLP 1207
++ R LPV ++++R +E S + +L F ++ +++ + L Y+ HL
Sbjct: 958 NVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGFFKFHDRPVTYLYNTLHYYEMHLR 1017
Query: 1208 GKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSK 1267
+ ++ V + ++ PQ S+ + ++ N +P Y +
Sbjct: 1018 DRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE------NPWVPDDTYYCR 1070
Query: 1268 -SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLP 1326
G +D KSP GP + R F + +P + L +E+++L
Sbjct: 1071 LIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAHA---LHVTCVELMALA 1116
Query: 1327 VSASQIVSSLVQIVVNIQP 1345
VS ++ ++L+ +V+ QP
Sbjct: 1117 VSGKEVGNALLNVVLKSQP 1135
>gi|395816457|ref|XP_003781718.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
[Otolemur garnettii]
Length = 1370
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 179/889 (20%), Positives = 348/889 (39%), Gaps = 159/889 (17%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 334 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 392
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 647
+D V +L + E C D N PQS F +C IW ++ + + +N
Sbjct: 393 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDN 443
Query: 648 EQLQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWL 702
+LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 444 SKLQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----L 493
Query: 703 SSAGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG- 757
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 494 PMGALVETIYGNGIMRIPLPGTSCLASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKL 553
Query: 758 ----GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIV 810
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+
Sbjct: 554 AHAKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMF 611
Query: 811 NYRL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILS 861
+YR+ P YR Q L+ + + + + + + LRL L + +
Sbjct: 612 SYRMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQP 666
Query: 862 QRDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMAT 918
Q F + S E +E LNR ++ LA +D+ + + +L+ IM+
Sbjct: 667 QFTRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSF 725
Query: 919 SQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVK 978
+ H W+ TL FP L+ + + ++ + V + + S S + +
Sbjct: 726 TPHNWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNESDIIT 781
Query: 979 TYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHH 1038
++ S P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 782 HFVQSSPP---LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYE 835
Query: 1039 IHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----I 1093
G L K ++ V + ++ LD L+L L R + + ++ +
Sbjct: 836 FSTS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQL 890
Query: 1094 TLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY---------- 1143
LL + + RV + + PEHWL + + H+++ ++Y
Sbjct: 891 LLLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLA 940
Query: 1144 --------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYY 1188
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 941 EQVEPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFH 1000
Query: 1189 PLRFSFVRDILAYFYGH------LPGKLIVRILNVFDLSKIP---FSESFPQHISSS--- 1236
+++ + L Y+ H L KL+ I+ ++ S+++ ++ ++
Sbjct: 1001 DRPVTYLYNTLHYYEMHLRERKFLKRKLVHAIIGSLKDNRPQGWCLSDTYLKNAMNAREE 1060
Query: 1237 NPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSE 1296
NP + P Y+ L+ LV+ + KSP GP +
Sbjct: 1061 NPWV-PDDTYYCRLIGRLVDTMA---------------------GKSP-----GPFPNCD 1093
Query: 1297 GRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
R F + +P + L +E+++L VS +++ ++L+ +V+ QP
Sbjct: 1094 WR--FNEFPNPAAHA---LHVTCVELMALAVSGNEVGNALLNVVLKSQP 1137
>gi|158706149|sp|Q5RIW8.2|MED23_DANRE RecName: Full=Mediator of RNA polymerase II transcription subunit 23;
AltName: Full=Cofactor required for Sp1 transcriptional
activation subunit 3; Short=CRSP complex subunit 3;
AltName: Full=Mediator complex subunit 23
Length = 1376
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 182/882 (20%), Positives = 340/882 (38%), Gaps = 144/882 (16%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 647
D V +L + E C D N PQS F +C IW ++ + + +N
Sbjct: 390 G-DFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDN 440
Query: 648 EQLQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQ----PACETV 698
+LQ K E+ +Q + + M D + + T ++ P V
Sbjct: 441 SKLQIPIPHSLKLHHEFLQQSLRNKSL----PMTDYKIALLCNAYSTNSECFTLPMGVLV 496
Query: 699 MNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG- 757
+ + PG+N M V PLPM+LL +++ + L + +
Sbjct: 497 ETIYGNGSMRITLPGTNC------MASGSVTPLPMNLLDSLTVHAKMSLIHSIATRVIKL 550
Query: 758 ----GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIV 810
+ + A+VETY+RL++ + SL + ++Q P++ G+ +LE+
Sbjct: 551 AHAKSSLALAPALVETYSRLLVYMEIESL--GIKGFISQLLPNVFKSHAWGILHTLLEMF 608
Query: 811 NYRL---LPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLA-ENLCMNLILS----- 861
+YR+ P YR Q ++ + S V + + L L E+ + LI +
Sbjct: 609 SYRMHHIQPHYRVQL--------LSHLHSLAAVPQTNQNQLHLCVESTALRLITALGSSE 660
Query: 862 -QRDFFSLKREGKG--STEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQI 915
Q F + K S E +E LNR ++ LA +D+ + + +L+ I
Sbjct: 661 VQPQFTRFLNDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTI 719
Query: 916 MATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPT 975
M + H W+ TL FP+ L+ + + ++ + V + + S + +
Sbjct: 720 MNFTPHNWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNEND 775
Query: 976 YVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVL 1035
+ + P +LC +L++ ++IN RVL + +++ T D L
Sbjct: 776 IITHFSMQGSPP--LFLCLLWKMLLET--DHINQIG-FRVLERIGARALVAHVRTFADFL 830
Query: 1036 LHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV--- 1092
++ G L K ++ V + ++ LD L+L L R + + ++
Sbjct: 831 VYEFSTS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFI 885
Query: 1093 --ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLF-KRVELQKALGNHLSWK--------- 1140
+ LL + + RV + + PEHWL S K + K L ++
Sbjct: 886 IQLLLLKPNDFRNRVSDF-VKENAPEHWLQSDWHTKHMTYHKKYPEKLYFEGLAEQVNPP 944
Query: 1141 -----ERYPTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSF 1194
+ P +F ++ R LPV ++++R +E S + +L ++ ++
Sbjct: 945 IQLQSQYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTY 1004
Query: 1195 VRDILAYFYGH------LPGKLIVRILNVFDLSKIP---FSESFPQ--HISSSNPVMCPP 1243
+ + L Y+ H L KL+ I++ ++ P SE++ + + + V P
Sbjct: 1005 LYNTLHYYERHLRDRTNLKRKLVHAIMSSLKDNRTPGWCLSETYLKCGMNAREDNVWIPD 1064
Query: 1244 LDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQ 1303
Y+ L+ LV+ + KSP GP + R F +
Sbjct: 1065 DTYYCKLIGRLVDTMA---------------------GKSP-----GPFPNCDWR--FNE 1096
Query: 1304 NQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
+P + L +E+++L V + ++L+ +V+ QP
Sbjct: 1097 FPNPAAHA---LHVTCVELMALAVPGKDVGNALLNVVLKSQP 1135
>gi|357616355|gb|EHJ70151.1| hypothetical protein KGM_21736 [Danaus plexippus]
Length = 1335
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 139/673 (20%), Positives = 266/673 (39%), Gaps = 136/673 (20%)
Query: 730 PLPMSLLTGFSLNLCLKL---------ALQMEDSIFGGQVVASIAMVETYTRLMLLAP-H 779
PL M +L +L+ + L L + G + + A+VETY+RL++
Sbjct: 525 PLSMCILDSLTLHCKMSLIHSIVTHVAKLAQNKTTIPGSNMMAPALVETYSRLLVYTEIE 584
Query: 780 SLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKIIS 836
SL F + N G+ +L++ +YR+ P YR TL+ +I + +
Sbjct: 585 SLGIKGFINQLLPNVFKSHAWGILHNLLDMFSYRIHHIQPHYRV-----TLLSNINSLAA 639
Query: 837 ALKVKRGDHRVLRLA-ENLCMNLILS------QRDFFSLKREGKG----STEFTETLNRI 885
+ + L+L E+ + LI S Q + E K S+E +E LNR+
Sbjct: 640 ---YPQANQTQLQLCFESTALRLITSLGSSGVQLQMSRVVSEPKSCVVVSSE-SEELNRV 695
Query: 886 TVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDK 945
V+ LA I G + + + +L IM + H WS+ TL+ FP +L
Sbjct: 696 LVLTLARGIYMTGTGNDGAAV--KEILTTIMTNTPHMWSQHTLQCFPPVL---------- 743
Query: 946 RGLTIQAWQQAETTVINQCTQLLSPSADPTYVK--------TYLSH-SFPQHRQYLCAGA 996
++ + Q N+ QLL S + Y K +SH S P +LC
Sbjct: 744 ----VEFFSQNPAPKENK--QLLKKSVEEEYRKWTSMANDNDIISHFSVPGTPLFLCLLW 797
Query: 997 WILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKA 1056
++ + + IN ++L +++++ D L+ + H + K
Sbjct: 798 KMIFETN--RINPIA-FKILERIGARALSAHLRKFCDYLVFEVTNPAGGPH-----INKC 849
Query: 1057 CANISFFVLTHELLPLDILLLALI-----DRDDDPHALRIV-ITLLDRQELQQRVKLYCM 1110
I+ + + ++ +D L+L L+ D ++ L I+ + LL EL+ R + + +
Sbjct: 850 VDAINDIIWKYNIVTIDRLVLCLVLRPNPDGNESQVCLYIIQLLLLKGSELRNRAQDF-V 908
Query: 1111 NRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-------------PTFFDDIAARLLPV 1157
PEHW + ++R H + E++ P + ++ R +PV
Sbjct: 909 KENSPEHWKQNNWYERHS-----AFHRKYPEKFAPEETSGAYGGPIPVYLSNVCLRFIPV 963
Query: 1158 IPLIVYRLIENDAMDSADRVLATYSSFLAYYPLR-FSFVRDILAYFYGH------LPGKL 1210
+ ++V+R +E + L + +L + R +F+ + L Y+ L KL
Sbjct: 964 LDIVVHRHLEIPQVSKNLEQLLEHLGYLYKFHDRPVTFLYNTLHYYESKLRDKPLLKRKL 1023
Query: 1211 IVRILNVFDLSKIP---FSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSK 1267
+ +L + P +E+F + S P L+Y+ +L+ +V+ ++
Sbjct: 1024 VTAVLGSLKEVRAPGWATTEAFQTFLGSETEAWSPDLNYYLSLINRMVDTMM-------- 1075
Query: 1268 SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPV 1327
G S+ F + +P + L +E++SLPV
Sbjct: 1076 ----------------------GSSHFPNTDWRFNEYPNPSAH---CLYVTCVELMSLPV 1110
Query: 1328 SASQIVSSLVQIV 1340
+ + ++L+ +V
Sbjct: 1111 PPNTVGNNLLDVV 1123
>gi|350420608|ref|XP_003492564.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Bombus impatiens]
Length = 1355
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 142/723 (19%), Positives = 281/723 (38%), Gaps = 119/723 (16%)
Query: 730 PLPMSLLTGFSLNLCLKLALQMEDSIFGG-----QVVASIAMVETYTRLMLLAP-HSLFR 783
PL MS+L +++ + L + + + + A+VETY+RL++ SL
Sbjct: 538 PLSMSILDSLTVHSKMSLIHSIVTHVIKSAQSKSNMALAPALVETYSRLLVYTEIESLGI 597
Query: 784 SLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKIISAL 838
F ++Q P++ G +LE+ +YR+ P YR Q L+ + + +
Sbjct: 598 KGF--ISQLLPTVFKSHAWGTLYTLLEMFSYRMHHIQPHYRVQ-----LLSHLHSLAAVP 650
Query: 839 KVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAI 892
+ + + LRL L + Q F + + S E +E LNR V+ LA
Sbjct: 651 QTNQTQLHLCVESTALRLITGLGSAEVQPQLSRFLSEPKTLVSAE-SEELNRALVLTLAR 709
Query: 893 IIKTRGIADADHV-LYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQ 951
+ G H + + +L IM + H+W+ TL+ FP +L + + + +
Sbjct: 710 SMHVTGTGSDSHSGTWCKELLNTIMQNTPHSWANHTLQCFPPVLSEFF----QQNSVPKE 765
Query: 952 AWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSAN 1011
QQ + V + S S + + + P +LC I+ + + S
Sbjct: 766 NKQQIKKAVEEEYRNWASMSNENDIIAHFSVPGTPP--LFLCLLWKIIFET---DRISPI 820
Query: 1012 LLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLP 1071
++L +++++ D L+ + H + K ++ + + ++
Sbjct: 821 AYKILERIGARALSAHLRKFCDYLVFEFANSVGGQH-----VNKCVDTVNDMIWKYNIVT 875
Query: 1072 LDILLLALIDR-----DDDPHALRIVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKR 1126
+D L+L L+ R D I + LL EL+ R + + + PEHW S
Sbjct: 876 IDRLILCLVLRTHEGSDAQVCFFIIQLLLLKAIELRNRTQEF-VKENSPEHWKQSNWH-- 932
Query: 1127 VELQKALGNHLSWKERY-------------------PTFFDDIAARLLPVIPLIVYRLIE 1167
+K L H + E++ P +F ++ R LPV ++V+R +E
Sbjct: 933 ---EKHLAFHRKFPEKFAPEGIMEQTSGGPSQYQSLPVYFGNVCLRFLPVFDIVVHRYLE 989
Query: 1168 NDAM-DSADRVLATYSSFLAYYPLRFSFVRDILAYFYGH------LPGKLIVRILNVFDL 1220
A+ S + +L ++ +++ + L Y+ L +L+ +L
Sbjct: 990 IPAVSKSLETLLEHLGCLYKFHDRPVTYLYNTLHYYERKLRDRPPLKRRLVAAVLGSLKE 1049
Query: 1221 SKIP---FSESFPQHISSSNP---VMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDA 1274
+ P SE++ +++ S P LDY+ L+ +V
Sbjct: 1050 IRAPGWALSEAYQMYMTRSTDDVVTWMPELDYYIRLVRRIVE------------------ 1091
Query: 1275 SLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVS 1334
+ SG ++ F + +P + L +E++++PV+ + + +
Sbjct: 1092 ------------TMSGTAHFPATDWRFNEFPNPAAHA---LYVTCVELMAVPVAPNIVAN 1136
Query: 1335 SLVQIVVNIQPTLIQTSNGPYGASNSVG-QGSVLPTSPSGGSTDSLGASRSTPSVSGINT 1393
SL+ +V + + S+ + N VG + LP D L A+ S+P ++ N
Sbjct: 1137 SLLDVVA--KGYTVIPSDEIHLWINCVGLLLAALPECYWSALHDRLVATISSPGLANWNY 1194
Query: 1394 SSF 1396
S+
Sbjct: 1195 SNL 1197
>gi|417406384|gb|JAA49852.1| Putative cofactor required for sp1 transcriptional activation subunit
3 [Desmodus rotundus]
Length = 1367
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 175/877 (19%), Positives = 341/877 (38%), Gaps = 135/877 (15%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 647
+D V +L + E C D N PQS F +C IW ++ + + +N
Sbjct: 390 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDN 440
Query: 648 EQLQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLS 703
+LQ + + Q S ++ + M+D + + T ++ C T L
Sbjct: 441 SKLQIPIPHSLNLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LP 491
Query: 704 SAGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-- 757
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 492 MGALVETIYGNGIMRIPLPGTSCLASASITPLPMNLLDSLTVHAKMSLIHSIATRVIKLA 551
Query: 758 ---GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVN 811
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +
Sbjct: 552 HAKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFS 609
Query: 812 YRL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQ 862
YR+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 610 YRMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQ 664
Query: 863 RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATS 919
F + S E +E LNR ++ LA +D+ + + +L+ IM+ +
Sbjct: 665 FTRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFT 723
Query: 920 QHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKT 979
H W+ TL FP L+ + + ++ + V + + S S + +
Sbjct: 724 PHNWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENNIITH 779
Query: 980 YLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHI 1039
+ + P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 780 FSNQGSP---LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEF 833
Query: 1040 HVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----IT 1094
G L K ++ V + ++ LD L+L L R + + ++ +
Sbjct: 834 STS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLL 888
Query: 1095 LLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY----------- 1143
LL + + RV + + PEHWL + + H+++ ++Y
Sbjct: 889 LLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAE 938
Query: 1144 -------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYP 1189
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 939 QVDPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHD 998
Query: 1190 LRFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFAT 1249
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 999 RPVTYLYNTLHYYEKHLRDRTFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNARED 1057
Query: 1250 LLLGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPG 1308
N +P Y + G +D KSP GP + R F + +P
Sbjct: 1058 ------NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPA 1100
Query: 1309 TYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
+ L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1101 AHA---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1134
>gi|456367244|ref|NP_001263983.1| mediator of RNA polymerase II transcription subunit 23 [Rattus
norvegicus]
Length = 1370
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 179/890 (20%), Positives = 342/890 (38%), Gaps = 160/890 (17%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 334 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 392
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 647
+D V +L + E C D N PQS F +C IW ++ + + +N
Sbjct: 393 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDN 443
Query: 648 EQLQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWL 702
+LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 444 SKLQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----L 493
Query: 703 SSAGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG- 757
+ E G+ + P + V PLPM+LL +++ + L + +
Sbjct: 494 PMGALVETIYGNGIMRVPLPGTSCLASASVTPLPMNLLDSLTVHAKMSLIHSIATRVIKL 553
Query: 758 ----GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIV 810
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+
Sbjct: 554 AHTKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMF 611
Query: 811 NYRL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILS 861
++R+ P YR Q L+ + + + + + + LRL L + +
Sbjct: 612 SHRMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQP 666
Query: 862 QRDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMAT 918
Q F + S E +E LNR ++ LA +D+ + + +L+ IM
Sbjct: 667 QFTRFLNDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMTF 725
Query: 919 SQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVK 978
+ H W+ TL FP+ L+ + + ++ + V + + S + + +
Sbjct: 726 TPHNWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIIT 781
Query: 979 TYLSHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLH 1037
+ FP +LC +L++ H I +VL + +++ T D L++
Sbjct: 782 QFSMQGFPP--LFLCLLWKMLLETDHISQIG----YKVLERIGARALVAHVRTFADFLVY 835
Query: 1038 HIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV----- 1092
G L K ++ V + ++ LD L+L L R + + ++
Sbjct: 836 EFSTS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQ 890
Query: 1093 ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------- 1143
+ LL + + RV + + PEHWL S + H+S+ ++Y
Sbjct: 891 LLLLKPNDFRNRVSDF-VKENSPEHWLQSDWHTK---------HMSYHKKYPEKLYFEGL 940
Query: 1144 ---------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAY 1187
P +F ++ R LPV ++++R +E S + +L +
Sbjct: 941 AEQVDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKF 1000
Query: 1188 YPLRFSFVRDILAYF------YGHLPGKLIVRILNVFDLSKIP---FSESFPQHISSS-- 1236
+ +++ + L Y+ HL KL+ I+ ++ S+++ +H ++
Sbjct: 1001 HDRPVTYLYNTLHYYEMCLRNRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKHAMNARE 1060
Query: 1237 -NPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVS 1295
NP + P Y+ L+ LV+ + KSP GP
Sbjct: 1061 DNPWV-PEDSYYCKLIGRLVDTMA---------------------GKSP-----GPFPNC 1093
Query: 1296 EGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
+ R F + +P + L +E+++L V + ++L+ +V+ QP
Sbjct: 1094 DWR--FNEFPNPAAHA---LHVTCVELMALAVPGKDVGNALLNVVLKSQP 1138
>gi|344247416|gb|EGW03520.1| Mediator of RNA polymerase II transcription subunit 23 [Cricetulus
griseus]
Length = 1367
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 179/889 (20%), Positives = 340/889 (38%), Gaps = 158/889 (17%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIW-SLNTSTREYLN 646
+D V +L + E C D N PQS F +C IW LN + +
Sbjct: 390 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IWIHLNRKAQNDDS 441
Query: 647 NEQL---QKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLS 703
N Q+ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 442 NLQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LP 491
Query: 704 SAGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-- 757
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 492 MGALVETIYGNGIMRVPLPGTSCLASASITPLPMNLLDSLTVHAKMSLIHSIATRVIKLA 551
Query: 758 ---GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVN 811
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +
Sbjct: 552 HAKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSNAWGILHTLLEMFS 609
Query: 812 YRL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQ 862
YR+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 610 YRMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQ 664
Query: 863 RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATS 919
F + S E +E LNR ++ LA +D+ + + +L+ IM +
Sbjct: 665 FTRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFT 723
Query: 920 QHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKT 979
H W+ TL FP+ L+ + + ++ + V + + S + + +
Sbjct: 724 PHNWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIITQ 779
Query: 980 YLSHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHH 1038
+ FP +LC +L++ H I RVL + +++ T D L++
Sbjct: 780 FSVQGFPP--LFLCLLWKMLLETDHISQIG----YRVLERIGARALVAHVRTFADFLVYE 833
Query: 1039 IHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----I 1093
G L K ++ V + ++ LD L+L L R + + ++ +
Sbjct: 834 FSTS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQL 888
Query: 1094 TLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY---------- 1143
LL + + RV + + PEHWL + + H+++ ++Y
Sbjct: 889 LLLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLA 938
Query: 1144 --------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYY 1188
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 939 EQVDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFH 998
Query: 1189 PLRFSFVRDILAYF------YGHLPGKLIVRILNVFDLSKIP---FSESFPQHISSS--- 1236
+++ + L Y+ HL KL+ I+ ++ S+++ +H ++
Sbjct: 999 DRPVTYLYNTLHYYEMCLRNRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKHAMNARED 1058
Query: 1237 NPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSE 1296
NP + P Y+ L+ LV+ + KSP GP +
Sbjct: 1059 NPWV-PEDSYYCKLIGRLVDTMA---------------------GKSP-----GPFPNCD 1091
Query: 1297 GRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
R F + +P + L +E+++L V + ++L+ +V+ QP
Sbjct: 1092 WR--FNEFPNPAAHA---LHVTCVELMALAVPGKDVGNALLNVVLKSQP 1135
>gi|158706146|sp|Q5EB59.2|MED23_RAT RecName: Full=Mediator of RNA polymerase II transcription subunit 23;
AltName: Full=Cofactor required for Sp1 transcriptional
activation subunit 3; Short=CRSP complex subunit 3;
AltName: Full=Mediator complex subunit 23
Length = 1367
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 179/890 (20%), Positives = 342/890 (38%), Gaps = 160/890 (17%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 647
+D V +L + E C D N PQS F +C IW ++ + + +N
Sbjct: 390 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDN 440
Query: 648 EQLQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWL 702
+LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 441 SKLQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----L 490
Query: 703 SSAGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG- 757
+ E G+ + P + V PLPM+LL +++ + L + +
Sbjct: 491 PMGALVETIYGNGIMRVPLPGTSCLASASVTPLPMNLLDSLTVHAKMSLIHSIATRVIKL 550
Query: 758 ----GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIV 810
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+
Sbjct: 551 AHTKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMF 608
Query: 811 NYRL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILS 861
++R+ P YR Q L+ + + + + + + LRL L + +
Sbjct: 609 SHRMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQP 663
Query: 862 QRDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMAT 918
Q F + S E +E LNR ++ LA +D+ + + +L+ IM
Sbjct: 664 QFTRFLNDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMTF 722
Query: 919 SQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVK 978
+ H W+ TL FP+ L+ + + ++ + V + + S + + +
Sbjct: 723 TPHNWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIIT 778
Query: 979 TYLSHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLH 1037
+ FP +LC +L++ H I +VL + +++ T D L++
Sbjct: 779 QFSMQGFPP--LFLCLLWKMLLETDHISQIG----YKVLERIGARALVAHVRTFADFLVY 832
Query: 1038 HIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV----- 1092
G L K ++ V + ++ LD L+L L R + + ++
Sbjct: 833 EFSTS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQ 887
Query: 1093 ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------- 1143
+ LL + + RV + + PEHWL S + H+S+ ++Y
Sbjct: 888 LLLLKPNDFRNRVSDF-VKENSPEHWLQSDWHTK---------HMSYHKKYPEKLYFEGL 937
Query: 1144 ---------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAY 1187
P +F ++ R LPV ++++R +E S + +L +
Sbjct: 938 AEQVDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKF 997
Query: 1188 YPLRFSFVRDILAYF------YGHLPGKLIVRILNVFDLSKIP---FSESFPQHISSS-- 1236
+ +++ + L Y+ HL KL+ I+ ++ S+++ +H ++
Sbjct: 998 HDRPVTYLYNTLHYYEMCLRNRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKHAMNARE 1057
Query: 1237 -NPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVS 1295
NP + P Y+ L+ LV+ + KSP GP
Sbjct: 1058 DNPWV-PEDSYYCKLIGRLVDTMA---------------------GKSP-----GPFPNC 1090
Query: 1296 EGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
+ R F + +P + L +E+++L V + ++L+ +V+ QP
Sbjct: 1091 DWR--FNEFPNPAAHA---LHVTCVELMALAVPGKDVGNALLNVVLKSQP 1135
>gi|354502126|ref|XP_003513138.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 1 [Cricetulus griseus]
Length = 1376
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 179/889 (20%), Positives = 340/889 (38%), Gaps = 158/889 (17%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 340 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 398
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIW-SLNTSTREYLN 646
+D V +L + E C D N PQS F +C IW LN + +
Sbjct: 399 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IWIHLNRKAQNDDS 450
Query: 647 NEQL---QKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLS 703
N Q+ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 451 NLQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LP 500
Query: 704 SAGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-- 757
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 501 MGALVETIYGNGIMRVPLPGTSCLASASITPLPMNLLDSLTVHAKMSLIHSIATRVIKLA 560
Query: 758 ---GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVN 811
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +
Sbjct: 561 HAKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSNAWGILHTLLEMFS 618
Query: 812 YRL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQ 862
YR+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 619 YRMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQ 673
Query: 863 RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATS 919
F + S E +E LNR ++ LA +D+ + + +L+ IM +
Sbjct: 674 FTRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFT 732
Query: 920 QHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKT 979
H W+ TL FP+ L+ + + ++ + V + + S + + +
Sbjct: 733 PHNWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIITQ 788
Query: 980 YLSHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHH 1038
+ FP +LC +L++ H I RVL + +++ T D L++
Sbjct: 789 FSVQGFPP--LFLCLLWKMLLETDHISQIG----YRVLERIGARALVAHVRTFADFLVYE 842
Query: 1039 IHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----I 1093
G L K ++ V + ++ LD L+L L R + + ++ +
Sbjct: 843 FSTS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQL 897
Query: 1094 TLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY---------- 1143
LL + + RV + + PEHWL + + H+++ ++Y
Sbjct: 898 LLLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLA 947
Query: 1144 --------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYY 1188
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 948 EQVDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFH 1007
Query: 1189 PLRFSFVRDILAYF------YGHLPGKLIVRILNVFDLSKIP---FSESFPQHISSS--- 1236
+++ + L Y+ HL KL+ I+ ++ S+++ +H ++
Sbjct: 1008 DRPVTYLYNTLHYYEMCLRNRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKHAMNARED 1067
Query: 1237 NPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSE 1296
NP + P Y+ L+ LV+ + KSP GP +
Sbjct: 1068 NPWV-PEDSYYCKLIGRLVDTMA---------------------GKSP-----GPFPNCD 1100
Query: 1297 GRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
R F + +P + L +E+++L V + ++L+ +V+ QP
Sbjct: 1101 WR--FNEFPNPAAHA---LHVTCVELMALAVPGKDVGNALLNVVLKSQP 1144
>gi|380800995|gb|AFE72373.1| mediator of RNA polymerase II transcription subunit 23 isoform a,
partial [Macaca mulatta]
Length = 1086
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 153/743 (20%), Positives = 290/743 (39%), Gaps = 110/743 (14%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 49 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 107
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 108 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 160
Query: 650 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 161 LQIPIPHSLRLHHEFLQQSLRNKSLQ---MNDYKIALLCNAYSTNSE--CFT----LPMG 211
Query: 706 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 212 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 271
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL F ++Q P++ G+ +LE+ +YR
Sbjct: 272 KSSVALAPALVETYSRLLVYMEIESLGIKGF--ISQLLPTVFKSHAWGILHTLLEMFSYR 329
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 330 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 384
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 385 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 443
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 444 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 499
Query: 982 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 1041
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 500 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVY---- 550
Query: 1042 ELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1095
E Q L C I + V + ++ LD L+L L R + + ++ + L
Sbjct: 551 EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 608
Query: 1096 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1143
L + + RV + + PEHWL + + H+S+ ++Y
Sbjct: 609 LKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMSYHKKYPEKLYFEGLAEQ 658
Query: 1144 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1190
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 659 VDPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 718
Query: 1191 RFSFVRDILAYFYGHLPGKLIVR 1213
+++ + L Y+ HL + ++
Sbjct: 719 PVTYLYNTLHYYEMHLRDRAFLK 741
>gi|354502128|ref|XP_003513139.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 2 [Cricetulus griseus]
Length = 1370
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 179/889 (20%), Positives = 340/889 (38%), Gaps = 158/889 (17%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 334 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 392
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIW-SLNTSTREYLN 646
+D V +L + E C D N PQS F +C IW LN + +
Sbjct: 393 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IWIHLNRKAQNDDS 444
Query: 647 NEQL---QKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLS 703
N Q+ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 445 NLQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LP 494
Query: 704 SAGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-- 757
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 495 MGALVETIYGNGIMRVPLPGTSCLASASITPLPMNLLDSLTVHAKMSLIHSIATRVIKLA 554
Query: 758 ---GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVN 811
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +
Sbjct: 555 HAKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSNAWGILHTLLEMFS 612
Query: 812 YRL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQ 862
YR+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 613 YRMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQ 667
Query: 863 RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATS 919
F + S E +E LNR ++ LA +D+ + + +L+ IM +
Sbjct: 668 FTRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFT 726
Query: 920 QHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKT 979
H W+ TL FP+ L+ + + ++ + V + + S + + +
Sbjct: 727 PHNWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIITQ 782
Query: 980 YLSHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHH 1038
+ FP +LC +L++ H I RVL + +++ T D L++
Sbjct: 783 FSVQGFPP--LFLCLLWKMLLETDHISQIG----YRVLERIGARALVAHVRTFADFLVYE 836
Query: 1039 IHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----I 1093
G L K ++ V + ++ LD L+L L R + + ++ +
Sbjct: 837 FSTS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQL 891
Query: 1094 TLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY---------- 1143
LL + + RV + + PEHWL + + H+++ ++Y
Sbjct: 892 LLLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLA 941
Query: 1144 --------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYY 1188
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 942 EQVDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFH 1001
Query: 1189 PLRFSFVRDILAYF------YGHLPGKLIVRILNVFDLSKIP---FSESFPQHISSS--- 1236
+++ + L Y+ HL KL+ I+ ++ S+++ +H ++
Sbjct: 1002 DRPVTYLYNTLHYYEMCLRNRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKHAMNARED 1061
Query: 1237 NPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSE 1296
NP + P Y+ L+ LV+ + KSP GP +
Sbjct: 1062 NPWV-PEDSYYCKLIGRLVDTMA---------------------GKSP-----GPFPNCD 1094
Query: 1297 GRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
R F + +P + L +E+++L V + ++L+ +V+ QP
Sbjct: 1095 WR--FNEFPNPAAHA---LHVTCVELMALAVPGKDVGNALLNVVLKSQP 1138
>gi|47219131|emb|CAG01794.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1398
Score = 61.2 bits (147), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 157/733 (21%), Positives = 289/733 (39%), Gaps = 150/733 (20%)
Query: 718 PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTR 772
P M V PLPM+LL +++ + L + + + + A+VETY+R
Sbjct: 518 PGTNCMASAAVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSIALAPALVETYSR 577
Query: 773 LML-LAPHSLFRSLFSHLAQRNPSLLA--KVGVTPLVLEIVNYRL---LPLYRYQGKTKT 826
L++ + SL + ++Q P++ G+ +LE+ +YR+ P YR Q
Sbjct: 578 LLVYMEIESL--GIKGFISQLLPNVFKCHAWGILHTLLEMFSYRMHHIQPHYRVQL---- 631
Query: 827 LMYDITKIISALKVKRGDHRVLRLA-ENLCMNLILS------QRDFFSLKREGKG--STE 877
++ + S V + + L L E+ + LI + Q F + K S E
Sbjct: 632 ----LSHLHSLAAVPQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFLSDPKTVLSAE 687
Query: 878 FTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSL 934
+E LNR ++ LA +D+ H + + +L+ IM + H W+ TL FP+
Sbjct: 688 -SEELNRALILTLARATHVTDFFTGSDSIHGTWCKDILQTIMNFTPHNWASHTLSCFPAP 746
Query: 935 LRDALIGRIDKRGL------------TIQAWQQAETTVINQCTQLLSPSADPTYVK---- 978
L+ L R + L QA+ + + V + L + + Y K
Sbjct: 747 LQVHLDSRQVRSDLPPPTDHYFPLVFCPQAFFK-QNNVPQESRFNLKKNVEEEYRKWKSM 805
Query: 979 ----TYLSHSFPQHRQ--YLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMV 1032
++H Q +LC +L++ ++IN RVL + +++ T
Sbjct: 806 ANENDIITHFSMQGSPPLFLCLLWKMLLET--DHINQIG-FRVLERIGARALVAHVRTFA 862
Query: 1033 DVLLHHIHVELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRD-------- 1083
D L++ E Q L C I + V + ++ LD L+L L+ R+
Sbjct: 863 DFLVY----EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLVSRNGGEASPVC 916
Query: 1084 -DDP--------HALR-------------IVITLLDRQELQQRVKLYCMNRGPPEHWLYS 1121
+P A+R I + LL + + RV + + PEHWL S
Sbjct: 917 AKNPVTSSLLFLQAMRSHENNEAQVCYFIIQLLLLKPNDFRNRVNDF-VKENAPEHWLQS 975
Query: 1122 GLF-KRVELQKALGNHLSWK--------------ERYPTFFDDIAARLLPVIPLIVYRLI 1166
K + K L ++ + P +F ++ R LPV ++++R +
Sbjct: 976 DWHNKHMNYHKKYPEKLYFEGLAEQVSPPMQLQSQYLPIYFGNVCLRFLPVFDIVIHRFL 1035
Query: 1167 E-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYF------YGHLPGKLIVRILNVFD 1219
E S + +L S ++ +++ + L Y+ +L KL+ I++
Sbjct: 1036 ELLPVSKSLETLLDHLGSLYKFHDRPVTYLYNTLHYYERQLRDRTNLKRKLVHAIMSSLK 1095
Query: 1220 LSKIP---FSESFPQHISSSNP----VMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTM 1272
++ P SE++ + NP V P Y+ L+ LV+N++ + S S +T+
Sbjct: 1096 DNRSPGWCLSETYLKF--GINPREDNVWIPDDTYYCKLIGRLVDNIL----HYSPSLNTL 1149
Query: 1273 DASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQI 1332
+ R P N EF +P + L +E+++L V +
Sbjct: 1150 THTHRCPF-----------PNCDWRFNEF---PNPAAHA---LHVTCVELMALAVPGKDV 1192
Query: 1333 VSSLVQIVVNIQP 1345
++L+ +V+ QP
Sbjct: 1193 GNALLNVVLKSQP 1205
>gi|449273995|gb|EMC83311.1| Mediator of RNA polymerase II transcription subunit 23, partial
[Columba livia]
Length = 1360
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 154/741 (20%), Positives = 290/741 (39%), Gaps = 120/741 (16%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 318 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 376
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 647
+D V +L + E C D N PQS F +C IW ++ + + + +N
Sbjct: 377 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAHSDN 427
Query: 648 EQLQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQ----PACETV 698
+LQ K E+ +Q + + M+D + + T ++ P V
Sbjct: 428 SKLQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSECFTLPMGVLV 483
Query: 699 MNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG- 757
+ + PG+N M + PLPM+LL +++ + L + +
Sbjct: 484 ETIYGNGNMGISLPGTNC------MASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKL 537
Query: 758 ----GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIV 810
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+
Sbjct: 538 AHAKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMF 595
Query: 811 NYRL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILS 861
+YR+ P YR Q L+ ++ + + + + + LRL L + +
Sbjct: 596 SYRMHHIQPHYRVQ-----LLSNLHSLAAVPQTNQNQLHLCVESTALRLITALGSSEVQP 650
Query: 862 QRDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMAT 918
Q F + S E +E LNR ++ LA +D+ + + +L+ IM+
Sbjct: 651 QFTRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSF 709
Query: 919 SQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVK 978
+ H W+ TL FP+ L+ + + ++ + V + + S + +
Sbjct: 710 TPHNWASHTLSCFPAPLQVFF----KQNNVPQESRFNLKKNVEEEYRKWKSMNTE----N 761
Query: 979 TYLSHSFPQHRQ--YLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLL 1036
+SH Q +LC +L++ ++IN RVL + +++ T D L+
Sbjct: 762 EIISHFSAQGSSPLFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLV 818
Query: 1037 HHIHVELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV--- 1092
+ E Q L C I + V + ++ LD L+L L R + + ++
Sbjct: 819 Y----EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFI 872
Query: 1093 --ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------- 1143
+ LL + + RV + + PEHWL + + H+S+ ++Y
Sbjct: 873 IQLLLLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMSYHKKYPEKLYFE 922
Query: 1144 -----------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFL 1185
P +F ++ R LPV ++++R +E S + +L
Sbjct: 923 GLAEQVNPPVQIQPQYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLY 982
Query: 1186 AYYPLRFSFVRDILAYFYGHL 1206
++ +++ + L Y+ HL
Sbjct: 983 KFHDRPVTYLYNTLHYYELHL 1003
>gi|355748903|gb|EHH53386.1| hypothetical protein EGM_14020 [Macaca fascicularis]
Length = 1368
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 176/875 (20%), Positives = 340/875 (38%), Gaps = 130/875 (14%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 390 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 650 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 493
Query: 706 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 494 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 553
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 554 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 611
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 612 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 666
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 667 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 725
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 726 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 781
Query: 982 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 1041
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 782 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFST 836
Query: 1042 ELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLL 1096
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 837 S-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLL 891
Query: 1097 DRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------- 1143
+ + RV + + PEHWL + + H+S+ ++Y
Sbjct: 892 KPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMSYHKKYPEKLYFEGLAEQV 941
Query: 1144 -----------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLR 1191
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 942 DPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRP 1001
Query: 1192 FSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLL 1251
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1002 VTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE-- 1058
Query: 1252 LGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTY 1310
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1059 ----NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAH 1103
Query: 1311 TQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1104 A---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|387762821|ref|NP_001248408.1| mediator of RNA polymerase II transcription subunit 23 [Macaca
mulatta]
gi|383410605|gb|AFH28516.1| mediator of RNA polymerase II transcription subunit 23 isoform a
[Macaca mulatta]
gi|384943050|gb|AFI35130.1| mediator of RNA polymerase II transcription subunit 23 isoform a
[Macaca mulatta]
gi|387542358|gb|AFJ71806.1| mediator of RNA polymerase II transcription subunit 23 isoform a
[Macaca mulatta]
Length = 1368
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 176/875 (20%), Positives = 340/875 (38%), Gaps = 130/875 (14%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 390 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 650 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 493
Query: 706 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 494 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 553
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 554 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 611
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 612 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 666
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 667 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 725
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 726 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 781
Query: 982 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 1041
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 782 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFST 836
Query: 1042 ELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLL 1096
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 837 S-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLL 891
Query: 1097 DRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------- 1143
+ + RV + + PEHWL + + H+S+ ++Y
Sbjct: 892 KPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMSYHKKYPEKLYFEGLAEQV 941
Query: 1144 -----------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLR 1191
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 942 DPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRP 1001
Query: 1192 FSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLL 1251
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1002 VTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE-- 1058
Query: 1252 LGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTY 1310
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1059 ----NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAH 1103
Query: 1311 TQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1104 A---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|6330569|dbj|BAA86530.1| KIAA1216 protein [Homo sapiens]
Length = 1421
Score = 60.5 bits (145), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 177/876 (20%), Positives = 341/876 (38%), Gaps = 132/876 (15%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 384 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 442
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 443 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 495
Query: 650 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 496 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 546
Query: 706 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 547 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 606
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 607 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 664
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 665 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 719
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 720 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 778
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 779 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 834
Query: 982 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 1041
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 835 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVY---- 885
Query: 1042 ELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1095
E Q L C I + V + ++ LD L+L L R + + ++ + L
Sbjct: 886 EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 943
Query: 1096 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1143
L + + RV + + PEHWL + + H+++ ++Y
Sbjct: 944 LKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQ 993
Query: 1144 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1190
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 994 VDPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 1053
Query: 1191 RFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATL 1250
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1054 PVTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE- 1111
Query: 1251 LLGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGT 1309
N +P Y + G +D KSP GP + R F + +P
Sbjct: 1112 -----NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAA 1155
Query: 1310 YTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
+ L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1156 HA---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1188
>gi|344264206|ref|XP_003404184.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
[Loxodonta africana]
Length = 1368
Score = 60.5 bits (145), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 149/737 (20%), Positives = 287/737 (38%), Gaps = 112/737 (15%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 647
+D V +L + E C D N PQS F +C IW ++ + + +N
Sbjct: 390 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDN 440
Query: 648 EQLQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLS 703
+LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 441 SKLQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LP 491
Query: 704 SAGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-- 757
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 492 MGALVETIYGNGIMRIPLPGTSCLASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLA 551
Query: 758 ---GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVN 811
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +
Sbjct: 552 HAKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFS 609
Query: 812 YRL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQ 862
YR+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 610 YRMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQ 664
Query: 863 RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATS 919
F + S E +E LNR ++ LA +D+ + + +L+ IM+ +
Sbjct: 665 FTRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFT 723
Query: 920 QHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKT 979
H W+ TL FP L+ + + ++ + V + + S S + +
Sbjct: 724 PHNWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITY 779
Query: 980 YLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHI 1039
+ P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 780 FSKQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEF 834
Query: 1040 HVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----IT 1094
G L K ++ V + ++ LD L+L L R + + ++ +
Sbjct: 835 STS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLL 889
Query: 1095 LLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY----------- 1143
LL + + RV + + PEHWL + + H+++ ++Y
Sbjct: 890 LLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAE 939
Query: 1144 -------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYP 1189
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 940 QVDPPIQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHD 999
Query: 1190 LRFSFVRDILAYFYGHL 1206
+++ + L Y+ HL
Sbjct: 1000 RPVTYLYNTLHYYEMHL 1016
>gi|391333244|ref|XP_003741029.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Metaseiulus occidentalis]
Length = 1407
Score = 60.5 bits (145), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 119/518 (22%), Positives = 217/518 (41%), Gaps = 74/518 (14%)
Query: 729 NPLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTRLMLLAP-HSL- 781
PL M LL +++ + L + + Q + S A+VETY+RL++ SL
Sbjct: 508 QPLSMGLLDSLTVHTKMSLIHNIVSQVMQVMKNQQQPILSPALVETYSRLLVYNEIESLG 567
Query: 782 FRSLFSHLAQRNPSLLAKVGVTPL--VLEIVNYRL---LPLYRYQGKTKTLMYDITKIIS 836
+ SHL P++ + L +LE+ +YRL P YR Q L+ + + S
Sbjct: 568 IKGFMSHLL---PAVFRQQAWAILHTLLEMFSYRLHHIQPHYRVQ-----LLSHLHSLAS 619
Query: 837 ALKVKRGDHRV------LRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIAL 890
+ + V L+L +L + Q F + + S + +E LN+ V+ L
Sbjct: 620 VPQTNQTQLHVCMESTALKLITSLGSGEVQPQLSRFQAEPKPLLSAD-SEELNKALVLTL 678
Query: 891 AIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTI 950
A I G +++ + + + +L ++ + H+WS TL FPS L + +R
Sbjct: 679 ARAIHVTG-SESLSMAWCKDLLHAALSNTPHSWSSATLSCFPSSLAEFFRTNQAQR---- 733
Query: 951 QAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSA 1010
+ Q + +V + + + S + V + P ++C +LM EN +
Sbjct: 734 ENKAQLKRSVEEEYRKWKTMSNENDIVAHFSQQGTPH--LFICLLWKMLM----ENDRVS 787
Query: 1011 NL-LRVLREFSPEEVTSNIYTMVDVLLHHIH------VELQRGHSLQDLLFKACANISFF 1063
L ++L ++ ++ T D L++ + V + +L DL++K
Sbjct: 788 PLAYKILDRLGSRALSLHLRTFADFLIYEVANCGPGPVVNKSIEALNDLIWKC------- 840
Query: 1064 VLTHELLPLD--ILLLAL--IDRDDDPHALRIVITLLDR-QELQQRVKLYCMNRGPPEHW 1118
++PLD IL LAL + ++ I+ LL R E + RV + + PEHW
Sbjct: 841 ----YVVPLDRFILTLALRSFEGNESQVCFFIIQMLLIRFGEFKSRVTDF-VKENLPEHW 895
Query: 1119 LYSGLFKR-VELQKALGNHLSWK---------ERYPTFFDDIAARLLPVIPLIVYRLIEN 1168
S +R ++ Q+ W+ + P +F +I R LPV+ ++++R IE
Sbjct: 896 TQSDWHERHLQFQRRYPEKFYWENLPDSSQPHQYLPVYFGNICLRFLPVLDIVLHRFIEL 955
Query: 1169 DAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHL 1206
+ + + + L Y + + F L Y Y L
Sbjct: 956 PVNLPNNSI--SIETILDYIGMLYRFHDRPLTYLYNTL 991
>gi|334324519|ref|XP_003340532.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 2 [Monodelphis domestica]
Length = 1373
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 153/741 (20%), Positives = 287/741 (38%), Gaps = 120/741 (16%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 334 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 392
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 647
+D V +L + E C D N PQS F +C IW ++ + + +N
Sbjct: 393 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDN 443
Query: 648 EQLQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQ----PACETV 698
+LQ K E+ +Q + + M+D + + T ++ P V
Sbjct: 444 SKLQIPIPHSLKLHHEFLQQSLRNKNL----QMNDYKIALLCNAYSTNSECFTLPMGVLV 499
Query: 699 MNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG- 757
+ + PG N M + PLPM+LL +++ + L + +
Sbjct: 500 ETIYGNGNMRISLPGINC------MASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKL 553
Query: 758 ----GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIV 810
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+
Sbjct: 554 AHAKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMF 611
Query: 811 NYRL---LPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLA-ENLCMNLILS----- 861
+YR+ P YR Q ++ + S V + + L L E+ + LI +
Sbjct: 612 SYRMHHIQPHYRVQL--------LSHLHSLAAVPQTNQNQLHLCVESTALRLITALGSSE 663
Query: 862 -QRDFFSLKREGKG--STEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQI 915
Q F + K S E +E LNR ++ LA +D+ + + +L+ I
Sbjct: 664 VQPQFTRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTI 722
Query: 916 MATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPT 975
M+ + H W+ TL FP+ L+ + + ++ + V + + S S +
Sbjct: 723 MSFTPHNWASHTLSCFPAPLQ----AFFQQNNVPQESRFNLKKNVEEEYRKWKSMSNEND 778
Query: 976 YVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVL 1035
+ + P +LC +L++ ++IN RVL + +++ T D L
Sbjct: 779 IITHFSMQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFL 833
Query: 1036 LHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV--- 1092
++ G L K ++ V + ++ LD L+L L R + + ++
Sbjct: 834 VYEFSTS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFI 888
Query: 1093 --ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------- 1143
+ LL + + RV + + PEHWL + + H+++ ++Y
Sbjct: 889 IQLLLLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFE 938
Query: 1144 -----------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFL 1185
P +F ++ R LPV ++++R +E S + +L
Sbjct: 939 GLAEQVNPPVQIQLPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLY 998
Query: 1186 AYYPLRFSFVRDILAYFYGHL 1206
++ +++ + L Y+ HL
Sbjct: 999 KFHDRPVTYLYNTLHYYERHL 1019
>gi|4884564|gb|AAD31729.1|AF105332_1 vitamin D3 receptor interacting protein [Homo sapiens]
Length = 1368
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 176/866 (20%), Positives = 338/866 (39%), Gaps = 112/866 (12%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 390 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 650 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 493
Query: 706 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 494 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 553
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 554 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 611
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 612 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 666
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 667 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 725
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 726 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 781
Query: 982 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 1041
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 782 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFST 836
Query: 1042 ELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLL 1096
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 837 S-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLL 891
Query: 1097 DRQELQQRVKLYCMNRGPPEHWLYSGLF-KRVELQKALGNHLSWK--------------E 1141
+ + RV + + PEHWL + K + K L ++
Sbjct: 892 KPNDFRNRVSDF-VKENSPEHWLQNDWHTKHMNYHKKYPEKLYFEGLAEQVDPPCTDPVS 950
Query: 1142 RYPTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILA 1200
P +F ++ R LPV ++++R +E S + +L ++ +++ + L
Sbjct: 951 YLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLH 1010
Query: 1201 YFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIP 1260
Y+ HL + ++ V + ++ PQ S+ + ++ N +P
Sbjct: 1011 YYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE------NPWVP 1063
Query: 1261 ALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAV 1319
Y + G +D KSP GP + R F + +P + L
Sbjct: 1064 DDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAHA---LHVTC 1109
Query: 1320 IEILSLPVSASQIVSSLVQIVVNIQP 1345
+E+++L VS ++ ++L+ +V+ QP
Sbjct: 1110 VELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|334324521|ref|XP_001380388.2| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 1 [Monodelphis domestica]
Length = 1379
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 155/742 (20%), Positives = 288/742 (38%), Gaps = 122/742 (16%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 340 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 398
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 647
+D V +L + E C D N PQS F +C IW ++ + + +N
Sbjct: 399 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDN 449
Query: 648 EQLQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQ----PACETV 698
+LQ K E+ +Q + + M+D + + T ++ P V
Sbjct: 450 SKLQIPIPHSLKLHHEFLQQSLRNKNL----QMNDYKIALLCNAYSTNSECFTLPMGVLV 505
Query: 699 MNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG- 757
+ + PG N M + PLPM+LL +++ + L + +
Sbjct: 506 ETIYGNGNMRISLPGINC------MASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKL 559
Query: 758 ----GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIV 810
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+
Sbjct: 560 AHAKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMF 617
Query: 811 NYRL---LPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLA-ENLCMNLILS----- 861
+YR+ P YR Q ++ + S V + + L L E+ + LI +
Sbjct: 618 SYRMHHIQPHYRVQL--------LSHLHSLAAVPQTNQNQLHLCVESTALRLITALGSSE 669
Query: 862 -QRDFFSLKREGKG--STEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQI 915
Q F + K S E +E LNR ++ LA +D+ + + +L+ I
Sbjct: 670 VQPQFTRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTI 728
Query: 916 MATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPT 975
M+ + H W+ TL FP+ L+ + + ++ + V + + S S +
Sbjct: 729 MSFTPHNWASHTLSCFPAPLQ----AFFQQNNVPQESRFNLKKNVEEEYRKWKSMSNEND 784
Query: 976 YVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVL 1035
+ + P +LC +L++ ++IN RVL + +++ T D L
Sbjct: 785 IITHFSMQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFL 839
Query: 1036 LHHIHVELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-- 1092
++ E Q L C I + V + ++ LD L+L L R + + ++
Sbjct: 840 VY----EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYF 893
Query: 1093 ---ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------ 1143
+ LL + + RV + + PEHWL + + H+++ ++Y
Sbjct: 894 IIQLLLLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYF 943
Query: 1144 ------------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSF 1184
P +F ++ R LPV ++++R +E S + +L
Sbjct: 944 EGLAEQVNPPVQIQLPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGL 1003
Query: 1185 LAYYPLRFSFVRDILAYFYGHL 1206
++ +++ + L Y+ HL
Sbjct: 1004 YKFHDRPVTYLYNTLHYYERHL 1025
>gi|38174459|gb|AAH60759.1| MED23 protein [Homo sapiens]
gi|190690205|gb|ACE86877.1| mediator complex subunit 23 protein [synthetic construct]
gi|190691581|gb|ACE87565.1| mediator complex subunit 23 protein [synthetic construct]
Length = 1359
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 177/876 (20%), Positives = 341/876 (38%), Gaps = 132/876 (15%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 390 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 650 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 493
Query: 706 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 494 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 553
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 554 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 611
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 612 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 666
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 667 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 725
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 726 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 781
Query: 982 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 1041
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 782 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVY---- 832
Query: 1042 ELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1095
E Q L C I + V + ++ LD L+L L R + + ++ + L
Sbjct: 833 EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 890
Query: 1096 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1143
L + + RV + + PEHWL + + H+++ ++Y
Sbjct: 891 LKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQ 940
Query: 1144 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1190
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 941 VDPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 1000
Query: 1191 RFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATL 1250
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1001 PVTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE- 1058
Query: 1251 LLGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGT 1309
N +P Y + G +D KSP GP + R F + +P
Sbjct: 1059 -----NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAA 1102
Query: 1310 YTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
+ L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1103 HA---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|296199254|ref|XP_002747007.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 3 [Callithrix jacchus]
Length = 1364
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 175/875 (20%), Positives = 340/875 (38%), Gaps = 130/875 (14%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 390 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 650 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 493
Query: 706 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 494 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 553
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 554 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 611
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 612 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 666
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 667 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 725
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 726 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 781
Query: 982 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 1041
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 782 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFST 836
Query: 1042 ELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLL 1096
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 837 S-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLL 891
Query: 1097 DRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------- 1143
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 892 KPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQV 941
Query: 1144 -----------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLR 1191
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 942 DPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRP 1001
Query: 1192 FSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLL 1251
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1002 VTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE-- 1058
Query: 1252 LGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTY 1310
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1059 ----NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAH 1103
Query: 1311 TQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1104 A---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|4826626|gb|AAD30202.1| mediator [Homo sapiens]
Length = 1364
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 179/876 (20%), Positives = 341/876 (38%), Gaps = 132/876 (15%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 390 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 650 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
LQ ++ + Q S + + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLRLHHEFLQQSLRHKSL---QMNDYKIALLCNAYSTNSE--CVT----LPMG 493
Query: 706 GVTELFPGSN---LP-PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ LP P M + PLPM+LL +++ + L + +
Sbjct: 494 ALVETIYGNGIMRLPLPGTNCMASASITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 553
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 554 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 611
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 612 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 666
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 667 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 725
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 726 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 781
Query: 982 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 1041
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 782 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVY---- 832
Query: 1042 ELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1095
E Q L C I + V + ++ LD L+L L R + + ++ + L
Sbjct: 833 EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 890
Query: 1096 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1143
L + + RV + + PEHWL + + H+++ ++Y
Sbjct: 891 LKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQ 940
Query: 1144 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1190
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 941 VDPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 1000
Query: 1191 RFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATL 1250
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1001 PVTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE- 1058
Query: 1251 LLGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGT 1309
N +P Y + G +D KSP GP + R F + +P
Sbjct: 1059 -----NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAA 1102
Query: 1310 YTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
+ L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1103 HA---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|296199250|ref|XP_002747006.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 2 [Callithrix jacchus]
Length = 1365
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 177/876 (20%), Positives = 341/876 (38%), Gaps = 132/876 (15%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 337 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 395
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 396 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 448
Query: 650 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 449 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 499
Query: 706 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 500 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 559
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 560 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 617
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 618 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 672
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 673 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 731
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 732 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 787
Query: 982 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 1041
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 788 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVY---- 838
Query: 1042 ELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1095
E Q L C I + V + ++ LD L+L L R + + ++ + L
Sbjct: 839 EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 896
Query: 1096 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1143
L + + RV + + PEHWL + + H+++ ++Y
Sbjct: 897 LKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQ 946
Query: 1144 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1190
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 947 VDPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 1006
Query: 1191 RFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATL 1250
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1007 PVTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE- 1064
Query: 1251 LLGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGT 1309
N +P Y + G +D KSP GP + R F + +P
Sbjct: 1065 -----NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAA 1108
Query: 1310 YTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
+ L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1109 HA---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1141
>gi|403282060|ref|XP_003932482.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 2 [Saimiri boliviensis boliviensis]
Length = 1359
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 175/875 (20%), Positives = 341/875 (38%), Gaps = 130/875 (14%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 390 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 650 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 493
Query: 706 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 494 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 553
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 554 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 611
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 612 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 666
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 667 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 725
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 726 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 781
Query: 982 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 1041
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 782 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFST 836
Query: 1042 ELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLL 1096
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 837 S-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLL 891
Query: 1097 DRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------- 1143
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 892 KPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQV 941
Query: 1144 -----------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLR 1191
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 942 DPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRP 1001
Query: 1192 FSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLL 1251
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1002 VTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE-- 1058
Query: 1252 LGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTY 1310
N +P +Y + G +D KSP GP + R F + +P +
Sbjct: 1059 ----NPWVPDDSYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAH 1103
Query: 1311 TQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1104 A---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|297679148|ref|XP_002817406.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 4 [Pongo abelii]
Length = 1359
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 177/876 (20%), Positives = 341/876 (38%), Gaps = 132/876 (15%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 390 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 650 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 493
Query: 706 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 494 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 553
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 554 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 611
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 612 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 666
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 667 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 725
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 726 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 781
Query: 982 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 1041
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 782 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVY---- 832
Query: 1042 ELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1095
E Q L C I + V + ++ LD L+L L R + + ++ + L
Sbjct: 833 EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 890
Query: 1096 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1143
L + + RV + + PEHWL + + H+++ ++Y
Sbjct: 891 LKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQ 940
Query: 1144 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1190
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 941 VDPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 1000
Query: 1191 RFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATL 1250
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1001 PVTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE- 1058
Query: 1251 LLGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGT 1309
N +P Y + G +D KSP GP + R F + +P
Sbjct: 1059 -----NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAA 1102
Query: 1310 YTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
+ L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1103 HA---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|403282058|ref|XP_003932481.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 1 [Saimiri boliviensis boliviensis]
Length = 1364
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 175/875 (20%), Positives = 341/875 (38%), Gaps = 130/875 (14%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 390 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 650 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 493
Query: 706 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 494 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 553
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 554 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 611
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 612 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 666
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 667 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 725
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 726 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 781
Query: 982 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 1041
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 782 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFST 836
Query: 1042 ELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLL 1096
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 837 S-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLL 891
Query: 1097 DRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------- 1143
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 892 KPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQV 941
Query: 1144 -----------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLR 1191
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 942 DPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRP 1001
Query: 1192 FSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLL 1251
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1002 VTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE-- 1058
Query: 1252 LGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTY 1310
N +P +Y + G +D KSP GP + R F + +P +
Sbjct: 1059 ----NPWVPDDSYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAH 1103
Query: 1311 TQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1104 A---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|426354563|ref|XP_004044728.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 2 [Gorilla gorilla gorilla]
Length = 1359
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 177/876 (20%), Positives = 341/876 (38%), Gaps = 132/876 (15%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 390 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 650 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 493
Query: 706 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 494 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 553
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 554 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 611
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 612 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 666
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 667 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 725
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 726 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 781
Query: 982 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 1041
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 782 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVY---- 832
Query: 1042 ELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1095
E Q L C I + V + ++ LD L+L L R + + ++ + L
Sbjct: 833 EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 890
Query: 1096 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1143
L + + RV + + PEHWL + + H+++ ++Y
Sbjct: 891 LKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQ 940
Query: 1144 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1190
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 941 VDPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 1000
Query: 1191 RFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATL 1250
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1001 PVTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE- 1058
Query: 1251 LLGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGT 1309
N +P Y + G +D KSP GP + R F + +P
Sbjct: 1059 -----NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAA 1102
Query: 1310 YTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
+ L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1103 HA---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|119568434|gb|EAW48049.1| cofactor required for Sp1 transcriptional activation, subunit 3,
130kDa, isoform CRA_a [Homo sapiens]
Length = 1369
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 174/873 (19%), Positives = 344/873 (39%), Gaps = 134/873 (15%)
Query: 535 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 592
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 336 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 390
Query: 593 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 651
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 391 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 444
Query: 652 ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGV 707
++ + Q S ++ + M+D + + T ++ C T L +
Sbjct: 445 IPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMGAL 495
Query: 708 TELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 758
E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 496 VETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKS 555
Query: 759 QVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 814
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 556 SVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMH 613
Query: 815 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 866
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 614 HIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRF 668
Query: 867 SLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTW 923
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W
Sbjct: 669 LSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNW 727
Query: 924 SEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSH 983
+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 728 ASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQ 783
Query: 984 SFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVEL 1043
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 784 GSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS- 837
Query: 1044 QRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDR 1098
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 838 AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKP 893
Query: 1099 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------- 1143
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 894 NDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVDP 943
Query: 1144 ---------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFS 1193
P +F ++ R LPV ++++R +E S + +L ++ +
Sbjct: 944 PVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVT 1003
Query: 1194 FVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLG 1253
++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1004 YLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE---- 1058
Query: 1254 LVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1312
N +P Y + G + A + KSP GP + R F + +P +
Sbjct: 1059 --NPWVPDDTYYCRLIGRLLCAPMAG---KSP-----GPFPNCDWR--FNEFPNPAAHA- 1105
Query: 1313 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1106 --LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1136
>gi|307173992|gb|EFN64710.1| Mediator of RNA polymerase II transcription subunit 23 [Camponotus
floridanus]
Length = 1357
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 128/666 (19%), Positives = 263/666 (39%), Gaps = 116/666 (17%)
Query: 730 PLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTRLMLLAP-HSLFR 783
PL MS+L +++ + L + + + + A+VETY+RL++ SL
Sbjct: 540 PLSMSILDSLTVHSKMSLIHSIVTHVIKLAQSKSNMALAPALVETYSRLLVYTEIESLGI 599
Query: 784 SLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKIISAL 838
F ++Q P++ G +LE+ +YR+ P YR Q L+ + + +
Sbjct: 600 KGF--ISQLLPTVFKSHAWGTLYTLLEMFSYRMHHIQPHYRVQ-----LLSHLHSLAAVP 652
Query: 839 KVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAI 892
+ + + LRL L + Q F + + S E +E LNR V+ LA
Sbjct: 653 QTNQTQLHLCVESTALRLITGLGSAEVQPQLSRFLSEPKTLVSAE-SEELNRALVLTLAR 711
Query: 893 IIKTRGI-ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQ 951
+ G AD+ + + +L IM + H+W+ TL+ FP +L + + + +
Sbjct: 712 SMHVTGTGADSLSGTWCKELLNTIMQNTPHSWANHTLQCFPPVLSEFF----QQNSIPKE 767
Query: 952 AWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSAN 1011
QQ V + S S + + + P +LC ++++ + S
Sbjct: 768 NKQQINKAVEEEYRNWSSMSNENDIIAHFSVPGTPP--LFLCVLWKMILKT---DCISPI 822
Query: 1012 LLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLP 1071
++L +++++ D L+ + H + K +I+ + + ++
Sbjct: 823 AYKILERIGARALSAHLRKFCDYLVFEFANSVAGQH-----VNKCVDSINDMIWKYNIVT 877
Query: 1072 LDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKR 1126
+D L+L L R + + ++ + LL E + R++ + + PEHW S
Sbjct: 878 IDRLILCLALRTQEGNEAQVCFFIIQLLLLKAAEFRNRLQEF-VKENSPEHWKQSNWH-- 934
Query: 1127 VELQKALGNHLSWKERY-------------------PTFFDDIAARLLPVIPLIVYRLIE 1167
+K L H + E++ P +F ++ R LPV ++V+R +E
Sbjct: 935 ---EKHLAFHRKFPEKFAPEGIMEQTSGGPSQYQSLPVYFGNVCLRFLPVFDIVVHRYLE 991
Query: 1168 -NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGH------LPGKLIVRILNVFDL 1220
+ S + +L ++ +++ + L Y+ L +L+ +L
Sbjct: 992 IPPVIKSLEILLEHLGCLYKFHDRPVTYLYNTLHYYERKLRDRPLLKRRLVSAVLGSLRE 1051
Query: 1221 SKIP---FSESFPQHISSSNP---VMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDA 1274
+ P SE++ ++++ N P LDY+ L+ +V
Sbjct: 1052 IRAPGWALSEAYQKYMTRLNDDAVQWIPELDYYIRLVQRIVE------------------ 1093
Query: 1275 SLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVS 1334
+ SG ++ F + +P + L +E+++LPV+A+ + +
Sbjct: 1094 ------------TMSGTAHFPATDWRFNEFPNPAAHA---LYVTCVELMALPVAANLVAN 1138
Query: 1335 SLVQIV 1340
SL+ +V
Sbjct: 1139 SLLDVV 1144
>gi|332213308|ref|XP_003255761.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 2 [Nomascus leucogenys]
Length = 1359
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 177/876 (20%), Positives = 341/876 (38%), Gaps = 132/876 (15%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 390 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 650 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 493
Query: 706 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 494 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 553
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 554 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 611
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 612 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 666
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 667 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 725
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 726 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 781
Query: 982 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 1041
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 782 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVY---- 832
Query: 1042 ELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1095
E Q L C I + V + ++ LD L+L L R + + ++ + L
Sbjct: 833 EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 890
Query: 1096 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1143
L + + RV + + PEHWL + + H+++ ++Y
Sbjct: 891 LKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQ 940
Query: 1144 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1190
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 941 VDPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 1000
Query: 1191 RFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATL 1250
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1001 PVTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE- 1058
Query: 1251 LLGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGT 1309
N +P Y + G +D KSP GP + R F + +P
Sbjct: 1059 -----NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAA 1102
Query: 1310 YTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
+ L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1103 HA---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|403282062|ref|XP_003932483.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 3 [Saimiri boliviensis boliviensis]
Length = 1365
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 177/876 (20%), Positives = 342/876 (39%), Gaps = 132/876 (15%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 337 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 395
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 396 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 448
Query: 650 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 449 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 499
Query: 706 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 500 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 559
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 560 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 617
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 618 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 672
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 673 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 731
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 732 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 787
Query: 982 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 1041
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 788 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVY---- 838
Query: 1042 ELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1095
E Q L C I + V + ++ LD L+L L R + + ++ + L
Sbjct: 839 EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 896
Query: 1096 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1143
L + + RV + + PEHWL + + H+++ ++Y
Sbjct: 897 LKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQ 946
Query: 1144 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1190
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 947 VDPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 1006
Query: 1191 RFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATL 1250
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1007 PVTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE- 1064
Query: 1251 LLGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGT 1309
N +P +Y + G +D KSP GP + R F + +P
Sbjct: 1065 -----NPWVPDDSYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAA 1108
Query: 1310 YTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
+ L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1109 HA---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1141
>gi|395455064|ref|NP_001257450.1| mediator of RNA polymerase II transcription subunit 23 isoform c
[Homo sapiens]
gi|332824960|ref|XP_003311536.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 2 [Pan troglodytes]
gi|397514893|ref|XP_003827705.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 2 [Pan paniscus]
Length = 1359
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 177/876 (20%), Positives = 341/876 (38%), Gaps = 132/876 (15%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 390 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 650 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 493
Query: 706 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 494 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 553
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 554 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 611
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 612 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 666
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 667 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 725
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 726 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 781
Query: 982 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 1041
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 782 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVY---- 832
Query: 1042 ELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1095
E Q L C I + V + ++ LD L+L L R + + ++ + L
Sbjct: 833 EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 890
Query: 1096 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1143
L + + RV + + PEHWL + + H+++ ++Y
Sbjct: 891 LKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQ 940
Query: 1144 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1190
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 941 VDPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 1000
Query: 1191 RFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATL 1250
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1001 PVTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE- 1058
Query: 1251 LLGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGT 1309
N +P Y + G +D KSP GP + R F + +P
Sbjct: 1059 -----NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAA 1102
Query: 1310 YTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
+ L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1103 HA---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|297679144|ref|XP_002817404.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 2 [Pongo abelii]
Length = 1365
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 177/876 (20%), Positives = 341/876 (38%), Gaps = 132/876 (15%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 337 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 395
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 396 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 448
Query: 650 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 449 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 499
Query: 706 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 500 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 559
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 560 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 617
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 618 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 672
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 673 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 731
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 732 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 787
Query: 982 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 1041
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 788 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVY---- 838
Query: 1042 ELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1095
E Q L C I + V + ++ LD L+L L R + + ++ + L
Sbjct: 839 EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 896
Query: 1096 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1143
L + + RV + + PEHWL + + H+++ ++Y
Sbjct: 897 LKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQ 946
Query: 1144 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1190
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 947 VDPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 1006
Query: 1191 RFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATL 1250
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1007 PVTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE- 1064
Query: 1251 LLGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGT 1309
N +P Y + G +D KSP GP + R F + +P
Sbjct: 1065 -----NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAA 1108
Query: 1310 YTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
+ L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1109 HA---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1141
>gi|426354565|ref|XP_004044729.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 3 [Gorilla gorilla gorilla]
Length = 1365
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 175/875 (20%), Positives = 340/875 (38%), Gaps = 130/875 (14%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 337 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 395
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 396 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 448
Query: 650 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 449 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 499
Query: 706 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 500 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 559
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 560 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 617
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 618 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 672
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 673 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 731
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 732 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 787
Query: 982 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 1041
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 788 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFST 842
Query: 1042 ELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLL 1096
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 843 S-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLL 897
Query: 1097 DRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------- 1143
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 898 KPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQV 947
Query: 1144 -----------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLR 1191
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 948 DPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRP 1007
Query: 1192 FSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLL 1251
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1008 VTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE-- 1064
Query: 1252 LGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTY 1310
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1065 ----NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAH 1109
Query: 1311 TQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1110 A---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1141
>gi|332213310|ref|XP_003255762.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 3 [Nomascus leucogenys]
Length = 1365
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 175/875 (20%), Positives = 340/875 (38%), Gaps = 130/875 (14%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 337 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 395
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 396 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 448
Query: 650 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 449 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 499
Query: 706 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 500 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 559
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 560 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 617
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 618 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 672
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 673 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 731
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 732 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 787
Query: 982 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 1041
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 788 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFST 842
Query: 1042 ELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLL 1096
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 843 S-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLL 897
Query: 1097 DRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------- 1143
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 898 KPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQV 947
Query: 1144 -----------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLR 1191
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 948 DPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRP 1007
Query: 1192 FSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLL 1251
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1008 VTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE-- 1064
Query: 1252 LGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTY 1310
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1065 ----NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAH 1109
Query: 1311 TQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1110 A---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1141
>gi|296199248|ref|XP_002747005.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 1 [Callithrix jacchus]
Length = 1359
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 175/875 (20%), Positives = 340/875 (38%), Gaps = 130/875 (14%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 390 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 650 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 493
Query: 706 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 494 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 553
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 554 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 611
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 612 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 666
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 667 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 725
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 726 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 781
Query: 982 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 1041
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 782 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFST 836
Query: 1042 ELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLL 1096
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 837 S-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLL 891
Query: 1097 DRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------- 1143
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 892 KPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQV 941
Query: 1144 -----------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLR 1191
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 942 DPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRP 1001
Query: 1192 FSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLL 1251
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1002 VTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE-- 1058
Query: 1252 LGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTY 1310
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1059 ----NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAH 1103
Query: 1311 TQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1104 A---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|28558969|ref|NP_057063.2| mediator of RNA polymerase II transcription subunit 23 isoform b
[Homo sapiens]
gi|332824962|ref|XP_527503.3| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 3 [Pan troglodytes]
gi|397514895|ref|XP_003827706.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 3 [Pan paniscus]
gi|12053065|emb|CAB66710.1| hypothetical protein [Homo sapiens]
gi|117645964|emb|CAL38449.1| hypothetical protein [synthetic construct]
Length = 1365
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 175/875 (20%), Positives = 340/875 (38%), Gaps = 130/875 (14%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 337 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 395
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 396 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 448
Query: 650 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 449 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 499
Query: 706 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 500 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 559
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 560 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 617
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 618 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 672
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 673 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 731
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 732 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 787
Query: 982 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 1041
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 788 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFST 842
Query: 1042 ELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLL 1096
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 843 S-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLL 897
Query: 1097 DRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------- 1143
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 898 KPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQV 947
Query: 1144 -----------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLR 1191
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 948 DPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRP 1007
Query: 1192 FSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLL 1251
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1008 VTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE-- 1064
Query: 1252 LGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTY 1310
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1065 ----NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAH 1109
Query: 1311 TQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1110 A---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1141
>gi|297679146|ref|XP_002817405.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 3 [Pongo abelii]
Length = 1364
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 175/875 (20%), Positives = 340/875 (38%), Gaps = 130/875 (14%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 390 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 650 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 493
Query: 706 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 494 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 553
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 554 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 611
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 612 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 666
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 667 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 725
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 726 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 781
Query: 982 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 1041
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 782 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFST 836
Query: 1042 ELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLL 1096
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 837 S-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLL 891
Query: 1097 DRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------- 1143
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 892 KPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQV 941
Query: 1144 -----------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLR 1191
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 942 DPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRP 1001
Query: 1192 FSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLL 1251
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1002 VTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE-- 1058
Query: 1252 LGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTY 1310
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1059 ----NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAH 1103
Query: 1311 TQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1104 A---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|332213306|ref|XP_003255760.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 1 [Nomascus leucogenys]
Length = 1364
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 175/875 (20%), Positives = 340/875 (38%), Gaps = 130/875 (14%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 390 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 650 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 493
Query: 706 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 494 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 553
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 554 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 611
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 612 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 666
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 667 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 725
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 726 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 781
Query: 982 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 1041
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 782 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFST 836
Query: 1042 ELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLL 1096
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 837 S-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLL 891
Query: 1097 DRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------- 1143
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 892 KPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQV 941
Query: 1144 -----------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLR 1191
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 942 DPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRP 1001
Query: 1192 FSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLL 1251
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1002 VTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE-- 1058
Query: 1252 LGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTY 1310
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1059 ----NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAH 1103
Query: 1311 TQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1104 A---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|410212318|gb|JAA03378.1| mediator complex subunit 23 [Pan troglodytes]
Length = 1374
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 175/875 (20%), Positives = 340/875 (38%), Gaps = 130/875 (14%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 337 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 395
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 396 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 448
Query: 650 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 449 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 499
Query: 706 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 500 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 559
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 560 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 617
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 618 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 672
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 673 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 731
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 732 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 787
Query: 982 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 1041
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 788 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFST 842
Query: 1042 ELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLL 1096
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 843 S-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLL 897
Query: 1097 DRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------- 1143
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 898 KPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQV 947
Query: 1144 -----------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLR 1191
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 948 DPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRP 1007
Query: 1192 FSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLL 1251
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1008 VTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE-- 1064
Query: 1252 LGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTY 1310
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1065 ----NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAH 1109
Query: 1311 TQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1110 A---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1141
>gi|28558971|ref|NP_004821.2| mediator of RNA polymerase II transcription subunit 23 isoform a
[Homo sapiens]
gi|28558074|sp|Q9ULK4.2|MED23_HUMAN RecName: Full=Mediator of RNA polymerase II transcription subunit 23;
AltName: Full=Activator-recruited cofactor 130 kDa
component; Short=ARC130; AltName: Full=Cofactor required
for Sp1 transcriptional activation subunit 3; Short=CRSP
complex subunit 3; AltName: Full=Mediator complex subunit
23; AltName: Full=Protein sur-2 homolog; Short=hSur-2;
AltName: Full=Transcriptional coactivator CRSP130;
AltName: Full=Vitamin D3 receptor-interacting protein
complex 130 kDa component; Short=DRIP130
gi|119568435|gb|EAW48050.1| cofactor required for Sp1 transcriptional activation, subunit 3,
130kDa, isoform CRA_b [Homo sapiens]
gi|168278829|dbj|BAG11294.1| cofactor required for Sp1 transcriptional activation, subunit 3
[synthetic construct]
gi|410212316|gb|JAA03377.1| mediator complex subunit 23 [Pan troglodytes]
gi|410255058|gb|JAA15496.1| mediator complex subunit 23 [Pan troglodytes]
gi|410297638|gb|JAA27419.1| mediator complex subunit 23 [Pan troglodytes]
gi|410336429|gb|JAA37161.1| mediator complex subunit 23 [Pan troglodytes]
Length = 1368
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 175/875 (20%), Positives = 340/875 (38%), Gaps = 130/875 (14%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 390 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 650 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 493
Query: 706 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 494 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 553
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 554 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 611
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 612 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 666
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 667 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 725
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 726 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 781
Query: 982 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 1041
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 782 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFST 836
Query: 1042 ELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLL 1096
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 837 S-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLL 891
Query: 1097 DRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------- 1143
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 892 KPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQV 941
Query: 1144 -----------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLR 1191
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 942 DPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRP 1001
Query: 1192 FSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLL 1251
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1002 VTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE-- 1058
Query: 1252 LGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTY 1310
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1059 ----NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAH 1103
Query: 1311 TQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1104 A---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|395455067|ref|NP_001257451.1| mediator of RNA polymerase II transcription subunit 23 isoform d
[Homo sapiens]
gi|332824958|ref|XP_003311535.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 1 [Pan troglodytes]
gi|397514891|ref|XP_003827704.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 1 [Pan paniscus]
gi|119568437|gb|EAW48052.1| cofactor required for Sp1 transcriptional activation, subunit 3,
130kDa, isoform CRA_d [Homo sapiens]
Length = 1364
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 177/876 (20%), Positives = 341/876 (38%), Gaps = 132/876 (15%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 390 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 650 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 493
Query: 706 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 494 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 553
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 554 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 611
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 612 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 666
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 667 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 725
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 726 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 781
Query: 982 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 1041
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 782 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVY---- 832
Query: 1042 ELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1095
E Q L C I + V + ++ LD L+L L R + + ++ + L
Sbjct: 833 EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 890
Query: 1096 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1143
L + + RV + + PEHWL + + H+++ ++Y
Sbjct: 891 LKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQ 940
Query: 1144 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1190
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 941 VDPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 1000
Query: 1191 RFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATL 1250
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1001 PVTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE- 1058
Query: 1251 LLGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGT 1309
N +P Y + G +D KSP GP + R F + +P
Sbjct: 1059 -----NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAA 1102
Query: 1310 YTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
+ L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1103 HA---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|426354561|ref|XP_004044727.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 1 [Gorilla gorilla gorilla]
Length = 1364
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 175/875 (20%), Positives = 340/875 (38%), Gaps = 130/875 (14%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 390 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 650 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 493
Query: 706 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 494 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 553
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 554 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 611
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 612 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 666
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 667 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 725
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 726 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 781
Query: 982 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 1041
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 782 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFST 836
Query: 1042 ELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLL 1096
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 837 S-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLL 891
Query: 1097 DRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------- 1143
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 892 KPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQV 941
Query: 1144 -----------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLR 1191
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 942 DPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRP 1001
Query: 1192 FSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLL 1251
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1002 VTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE-- 1058
Query: 1252 LGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTY 1310
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1059 ----NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAH 1103
Query: 1311 TQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1104 A---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|37360288|dbj|BAC98122.1| mKIAA1216 protein [Mus musculus]
Length = 1385
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 179/889 (20%), Positives = 339/889 (38%), Gaps = 158/889 (17%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 349 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 407
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIW-SLNTSTREYLN 646
+D V +L + E C D N PQS F +C IW LN + +
Sbjct: 408 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IWIHLNRKAQNGDS 459
Query: 647 NEQL---QKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLS 703
Q+ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 460 TLQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LP 509
Query: 704 SAGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-- 757
+ E G+ + P + V PLPM+LL +++ + L + +
Sbjct: 510 MGALVETIYGNGIMRVPLPGTSCLASASVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLA 569
Query: 758 ---GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVN 811
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +
Sbjct: 570 HTKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFS 627
Query: 812 YRL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQ 862
+R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 628 HRMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQ 682
Query: 863 RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATS 919
F + S E +E LNR ++ LA +D+ + + +L+ IM +
Sbjct: 683 FTRFLNDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFT 741
Query: 920 QHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKT 979
H W+ TL FP+ L+ + + ++ + V + + S + + +
Sbjct: 742 PHNWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIITQ 797
Query: 980 YLSHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHH 1038
+ FP +LC +L++ H I +VL + +++ T D L++
Sbjct: 798 FSVQGFPP--LFLCLLWKMLLETDHISQIG----YKVLERIGARALVAHVRTFADFLVYE 851
Query: 1039 IHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----I 1093
G L K ++ V + ++ LD L+L L R + + ++ +
Sbjct: 852 FSTS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQL 906
Query: 1094 TLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY---------- 1143
LL + + RV + + PEHWL S + H+S+ ++Y
Sbjct: 907 LLLKPNDFRNRVSDF-VKENSPEHWLQSDWHTK---------HMSYHKKYPEKLYFEGLA 956
Query: 1144 --------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYY 1188
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 957 EQVDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFH 1016
Query: 1189 PLRFSFVRDILAYF------YGHLPGKLIVRILNVFDLSKIP---FSESFPQHISSS--- 1236
+++ + L Y+ HL KL+ I+ ++ S+++ +H ++
Sbjct: 1017 DRPVTYLYNTLHYYEMCLRNRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKHAMNARED 1076
Query: 1237 NPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSE 1296
NP + P Y+ L+ LV+ + KSP GP +
Sbjct: 1077 NPWV-PEDSYYCKLIGRLVDTMA---------------------GKSP-----GPFPNCD 1109
Query: 1297 GRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
R F + +P + L +E+++L V + ++L+ +V+ QP
Sbjct: 1110 WR--FNEFPNPAAHA---LHVTCVELMALAVPGKDVGNALLNVVLKSQP 1153
>gi|158706145|sp|Q80YQ2.2|MED23_MOUSE RecName: Full=Mediator of RNA polymerase II transcription subunit 23;
AltName: Full=Cofactor required for Sp1 transcriptional
activation subunit 3; Short=CRSP complex subunit 3;
AltName: Full=Mediator complex subunit 23; AltName:
Full=Protein sur-2 homolog; Short=mSur-2
Length = 1367
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 181/890 (20%), Positives = 340/890 (38%), Gaps = 160/890 (17%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIW-SLNTSTREYLN 646
+D V +L + E C D N PQS F +C IW LN + +
Sbjct: 390 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IWIHLNRKAQNGDS 441
Query: 647 NEQL---QKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLS 703
Q+ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 442 TLQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LP 491
Query: 704 SAGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-- 757
+ E G+ + P + V PLPM+LL +++ + L + +
Sbjct: 492 MGALVETIYGNGIMRVPLPGTSCLASASVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLA 551
Query: 758 ---GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVN 811
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +
Sbjct: 552 HTKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFS 609
Query: 812 YRL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQ 862
+R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 610 HRMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQ 664
Query: 863 RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATS 919
F + S E +E LNR ++ LA +D+ + + +L+ IM +
Sbjct: 665 FTRFLNDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFT 723
Query: 920 QHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKT 979
H W+ TL FP+ L+ + + ++ + V + + S + + +
Sbjct: 724 PHNWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIITQ 779
Query: 980 YLSHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHH 1038
+ FP +LC +L++ H I +VL + +++ T D L++
Sbjct: 780 FSVQGFPP--LFLCLLWKMLLETDHISQIG----YKVLERIGARALVAHVRTFADFLVY- 832
Query: 1039 IHVELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV----- 1092
E Q L C I + V + ++ LD L+L L R + + ++
Sbjct: 833 ---EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQ 887
Query: 1093 ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------- 1143
+ LL + + RV + + PEHWL S + H+S+ ++Y
Sbjct: 888 LLLLKPNDFRNRVSDF-VKENSPEHWLQSDWHTK---------HMSYHKKYPEKLYFEGL 937
Query: 1144 ---------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAY 1187
P +F ++ R LPV ++++R +E S + +L +
Sbjct: 938 AEQVDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKF 997
Query: 1188 YPLRFSFVRDILAYF------YGHLPGKLIVRILNVFDLSKIP---FSESFPQHISSS-- 1236
+ +++ + L Y+ HL KL+ I+ ++ S+++ +H ++
Sbjct: 998 HDRPVTYLYNTLHYYEMCLRNRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKHAMNARE 1057
Query: 1237 -NPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVS 1295
NP + P Y+ L+ LV+ + KSP GP
Sbjct: 1058 DNPWV-PEDSYYCKLIGRLVDTMA---------------------GKSP-----GPFPNC 1090
Query: 1296 EGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
+ R F + +P + L +E+++L V + ++L+ +V+ QP
Sbjct: 1091 DWR--FNEFPNPAAHA---LHVTCVELMALAVPGKDVGNALLNVVLKSQP 1135
>gi|261878547|ref|NP_081623.3| mediator of RNA polymerase II transcription subunit 23 isoform 2 [Mus
musculus]
Length = 1370
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 181/890 (20%), Positives = 340/890 (38%), Gaps = 160/890 (17%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 334 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 392
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIW-SLNTSTREYLN 646
+D V +L + E C D N PQS F +C IW LN + +
Sbjct: 393 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IWIHLNRKAQNGDS 444
Query: 647 NEQL---QKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLS 703
Q+ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 445 TLQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LP 494
Query: 704 SAGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-- 757
+ E G+ + P + V PLPM+LL +++ + L + +
Sbjct: 495 MGALVETIYGNGIMRVPLPGTSCLASASVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLA 554
Query: 758 ---GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVN 811
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +
Sbjct: 555 HTKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFS 612
Query: 812 YRL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQ 862
+R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 613 HRMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQ 667
Query: 863 RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATS 919
F + S E +E LNR ++ LA +D+ + + +L+ IM +
Sbjct: 668 FTRFLNDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFT 726
Query: 920 QHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKT 979
H W+ TL FP+ L+ + + ++ + V + + S + + +
Sbjct: 727 PHNWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIITQ 782
Query: 980 YLSHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHH 1038
+ FP +LC +L++ H I +VL + +++ T D L++
Sbjct: 783 FSVQGFPP--LFLCLLWKMLLETDHISQIG----YKVLERIGARALVAHVRTFADFLVY- 835
Query: 1039 IHVELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV----- 1092
E Q L C I + V + ++ LD L+L L R + + ++
Sbjct: 836 ---EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQ 890
Query: 1093 ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------- 1143
+ LL + + RV + + PEHWL S + H+S+ ++Y
Sbjct: 891 LLLLKPNDFRNRVSDF-VKENSPEHWLQSDWHTK---------HMSYHKKYPEKLYFEGL 940
Query: 1144 ---------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAY 1187
P +F ++ R LPV ++++R +E S + +L +
Sbjct: 941 AEQVDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKF 1000
Query: 1188 YPLRFSFVRDILAYF------YGHLPGKLIVRILNVFDLSKIP---FSESFPQHISSS-- 1236
+ +++ + L Y+ HL KL+ I+ ++ S+++ +H ++
Sbjct: 1001 HDRPVTYLYNTLHYYEMCLRNRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKHAMNARE 1060
Query: 1237 -NPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVS 1295
NP + P Y+ L+ LV+ + KSP GP
Sbjct: 1061 DNPWV-PEDSYYCKLIGRLVDTMA---------------------GKSP-----GPFPNC 1093
Query: 1296 EGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
+ R F + +P + L +E+++L V + ++L+ +V+ QP
Sbjct: 1094 DWR--FNEFPNPAAHA---LHVTCVELMALAVPGKDVGNALLNVVLKSQP 1138
>gi|194388184|dbj|BAG65476.1| unnamed protein product [Homo sapiens]
Length = 1009
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 109/547 (19%), Positives = 218/547 (39%), Gaps = 84/547 (15%)
Query: 718 PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTR 772
P M + PLPM+LL +++ + L + + V + A+VETY+R
Sbjct: 151 PGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSVALAPALVETYSR 210
Query: 773 LML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKT 826
L++ + SL F ++Q P++ G+ +LE+ +YR+ P YR Q
Sbjct: 211 LLVYMEIESLGIKGF--ISQLLPTVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQ----- 263
Query: 827 LMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTE 880
L+ + + + + + + LRL L + + Q F + S E +E
Sbjct: 264 LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFLSDPKTVLSAE-SE 322
Query: 881 TLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRD 937
LNR ++ LA +D+ + + +L+ IM+ + H W+ TL FP L+
Sbjct: 323 ELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNWASHTLSCFPGPLQ- 381
Query: 938 ALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAW 997
+ + ++ + V + + S S + + + P +LC
Sbjct: 382 ---AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQGSPP--LFLCLLWK 436
Query: 998 ILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKAC 1057
+L++ ++IN RVL + +++ T D L++ E Q L C
Sbjct: 437 MLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVY----EFSTSAGGQQL--NKC 487
Query: 1058 ANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCMN 1111
I + V + ++ LD L+L L R + + ++ + LL + + RV + +
Sbjct: 488 IEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVSDF-VK 546
Query: 1112 RGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------------------PTFF 1147
PEHWL + + H+++ ++Y P +F
Sbjct: 547 ENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVDPPVQIQSPYLPIYF 597
Query: 1148 DDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHL 1206
++ R LPV ++++R +E S + +L ++ +++ + L Y+ HL
Sbjct: 598 GNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYEMHL 657
Query: 1207 PGKLIVR 1213
+ ++
Sbjct: 658 RDRAFLK 664
>gi|29748076|gb|AAH50916.1| Mediator complex subunit 23 [Mus musculus]
Length = 1367
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 180/888 (20%), Positives = 343/888 (38%), Gaps = 165/888 (18%)
Query: 535 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 592
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 336 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 390
Query: 593 DSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIW-SLNTSTREYLNNE 648
D V +L + E C D N PQS F +C IW LN + +
Sbjct: 391 DFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IWIHLNRKAQNGDSTL 443
Query: 649 QL---QKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
Q+ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 444 QIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPMG 493
Query: 706 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ + P + V PLPM+LL +++ + L + +
Sbjct: 494 ALVETIYGNGIMRVPLPGTSCLASASVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHT 553
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ ++R
Sbjct: 554 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSHR 611
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 612 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 666
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM + H
Sbjct: 667 RFLNDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFTPH 725
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP+ L+ + + ++ + V + + S + + + +
Sbjct: 726 NWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIITQFS 781
Query: 982 SHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 1040
FP +LC +L++ H I +VL + +++ T D L++
Sbjct: 782 VQGFPP--LFLCLLWKMLLETDHISQIG----YKVLERIGARALVAHVRTFADFLVY--- 832
Query: 1041 VELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----IT 1094
E Q L C I + V + ++ LD L+L L R + + ++ +
Sbjct: 833 -EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLL 889
Query: 1095 LLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY----------- 1143
LL + + RV + + PEHWL S + H+S+ ++Y
Sbjct: 890 LLKPNDFRNRVSDF-VKENSPEHWLQSDWHTK---------HMSYHKKYPEKLYFEGLAE 939
Query: 1144 -------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYP 1189
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 940 QVDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHD 999
Query: 1190 LRFSFVRDILAYF------YGHLPGKLIVRILNVFDLSKIP---FSESFPQHISSS---N 1237
+++ + L Y+ HL KL+ I+ ++ S+++ +H ++ N
Sbjct: 1000 RPVTYLYNTLHYYEMCLRNRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKHAMNAREDN 1059
Query: 1238 PVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEG 1297
P + P Y+ L+ LV+ + KSP GP +
Sbjct: 1060 PWV-PEDSYYCKLIGRLVDTMA---------------------GKSP-----GPFPNCDW 1092
Query: 1298 RKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
R F + +P + L +E+++L V + ++L+ +V+ QP
Sbjct: 1093 R--FNEFPNPAAHA---LHVTCVELMALAVPGKDVGNALLNVVLKSQP 1135
>gi|348565446|ref|XP_003468514.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Cavia porcellus]
Length = 1377
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 183/887 (20%), Positives = 341/887 (38%), Gaps = 154/887 (17%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 340 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 398
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 399 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 451
Query: 650 LQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSS 704
LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 452 LQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPM 501
Query: 705 AGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG--- 757
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 502 GALVETIYGNGIMRIPLPGTSCLASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAH 561
Query: 758 --GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNY 812
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +Y
Sbjct: 562 AKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSY 619
Query: 813 RL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQR 863
R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 620 RMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQF 674
Query: 864 DFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQ 920
F + S E +E LNR ++ LA +D+ + + +L+ IM+ +
Sbjct: 675 TRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTP 733
Query: 921 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTY 980
H W+ TL FP L+ + + ++ + V + + S + + + +
Sbjct: 734 HNWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNESDIITHF 789
Query: 981 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 1040
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 790 SIQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVY--- 841
Query: 1041 VELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----IT 1094
E Q L C I + V + ++ LD L+L L R + + ++ +
Sbjct: 842 -EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLL 898
Query: 1095 LLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY----------- 1143
LL + + RV + + PEHWL + + H+++ ++Y
Sbjct: 899 LLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAE 948
Query: 1144 -------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYP 1189
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 949 QVDPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHD 1008
Query: 1190 LRFSFVRDILAYF------YGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNP----V 1239
+++ + L Y+ HL KL+ I+ ++ PQ S+ V
Sbjct: 1009 RPVTYLYNTLHYYERYLRNRDHLKRKLVHAIIG-------SLKDNRPQGWCLSDTYLKNV 1061
Query: 1240 MCPPLDYFATLLLGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGR 1298
M P D N +P +Y K G +D KSP GP + R
Sbjct: 1062 MNPRED----------NPWVPDDSYYCKLIGRLVDTMA----GKSP-----GPFPNCDWR 1102
Query: 1299 KEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
F + +P + L +E+++L VS + ++L+ +V+ QP
Sbjct: 1103 --FNEFPNPAAHA---LHVTCVELMALAVSGKDVGNALLNVVLKSQP 1144
>gi|395534930|ref|XP_003769486.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
[Sarcophilus harrisii]
Length = 1373
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 154/742 (20%), Positives = 289/742 (38%), Gaps = 121/742 (16%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 334 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 392
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 647
+D V +L + E C + N PQS F +C IW ++ + + +N
Sbjct: 393 -ADFLPVMKLFDLL--YPEKECIPVPNINKPQSTH-AFAMTC----IW-IHLNRKAQNDN 443
Query: 648 EQLQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQ----PACETV 698
+LQ K E+ +Q + + M+D + + T ++ P V
Sbjct: 444 SKLQIPIPHSLKLHHEFLQQSLRNKNL----QMNDYKIALLCNAYSTNSECFTLPMGVLV 499
Query: 699 MNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG- 757
+ + PG N M + PLPM+LL +++ + L + +
Sbjct: 500 ETIYGNGNMRISLPGINC------MASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKL 553
Query: 758 ----GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIV 810
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+
Sbjct: 554 AHAKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMF 611
Query: 811 NYRL---LPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLA-ENLCMNLILS----- 861
+YR+ P YR Q ++ + S V + + L L E+ + LI +
Sbjct: 612 SYRMHHIQPHYRVQL--------LSHLHSLAAVSQTNQNQLHLCVESTALRLITALGSSE 663
Query: 862 -QRDFFSLKREGKG--STEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQI 915
Q F + K S E +E LNR ++ LA +D+ + + +L+ I
Sbjct: 664 VQPQFTRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTI 722
Query: 916 MATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPT 975
M+ + H W+ TL FP+ L+ + + ++ + V + + S + +
Sbjct: 723 MSFTPHNWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNEND 778
Query: 976 YVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVL 1035
+ + S P +LC +L++ ++IN RVL + +++ T D L
Sbjct: 779 IITHFFSMQSPP-PLFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFL 834
Query: 1036 LHHIHVELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-- 1092
++ E Q L C I + V + ++ LD L+L L R + + ++
Sbjct: 835 VY----EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYF 888
Query: 1093 ---ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------ 1143
+ LL + + RV + + PEHWL + + H+++ ++Y
Sbjct: 889 IIQLLLLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYF 938
Query: 1144 ------------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSF 1184
P +F ++ R LPV ++++R +E S + +L
Sbjct: 939 EGLAEQVNPPVQIQLPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGL 998
Query: 1185 LAYYPLRFSFVRDILAYFYGHL 1206
++ +++ + L Y+ HL
Sbjct: 999 YKFHDRPVTYLYNTLHYYEMHL 1020
>gi|261878545|ref|NP_001159888.1| mediator of RNA polymerase II transcription subunit 23 isoform 1 [Mus
musculus]
Length = 1376
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 179/889 (20%), Positives = 339/889 (38%), Gaps = 158/889 (17%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 340 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 398
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIW-SLNTSTREYLN 646
+D V +L + E C D N PQS F +C IW LN + +
Sbjct: 399 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IWIHLNRKAQNGDS 450
Query: 647 NEQL---QKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLS 703
Q+ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 451 TLQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LP 500
Query: 704 SAGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-- 757
+ E G+ + P + V PLPM+LL +++ + L + +
Sbjct: 501 MGALVETIYGNGIMRVPLPGTSCLASASVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLA 560
Query: 758 ---GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVN 811
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +
Sbjct: 561 HTKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFS 618
Query: 812 YRL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQ 862
+R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 619 HRMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQ 673
Query: 863 RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATS 919
F + S E +E LNR ++ LA +D+ + + +L+ IM +
Sbjct: 674 FTRFLNDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFT 732
Query: 920 QHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKT 979
H W+ TL FP+ L+ + + ++ + V + + S + + +
Sbjct: 733 PHNWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIITQ 788
Query: 980 YLSHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHH 1038
+ FP +LC +L++ H I +VL + +++ T D L++
Sbjct: 789 FSVQGFPP--LFLCLLWKMLLETDHISQIG----YKVLERIGARALVAHVRTFADFLVYE 842
Query: 1039 IHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----I 1093
G L K ++ V + ++ LD L+L L R + + ++ +
Sbjct: 843 FSTS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQL 897
Query: 1094 TLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY---------- 1143
LL + + RV + + PEHWL S + H+S+ ++Y
Sbjct: 898 LLLKPNDFRNRVSDF-VKENSPEHWLQSDWHTK---------HMSYHKKYPEKLYFEGLA 947
Query: 1144 --------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYY 1188
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 948 EQVDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFH 1007
Query: 1189 PLRFSFVRDILAYF------YGHLPGKLIVRILNVFDLSKIP---FSESFPQHISSS--- 1236
+++ + L Y+ HL KL+ I+ ++ S+++ +H ++
Sbjct: 1008 DRPVTYLYNTLHYYEMCLRNRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKHAMNARED 1067
Query: 1237 NPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSE 1296
NP + P Y+ L+ LV+ + KSP GP +
Sbjct: 1068 NPWV-PEDSYYCKLIGRLVDTMA---------------------GKSP-----GPFPNCD 1100
Query: 1297 GRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
R F + +P + L +E+++L V + ++L+ +V+ QP
Sbjct: 1101 WR--FNEFPNPAAHA---LHVTCVELMALAVPGKDVGNALLNVVLKSQP 1144
>gi|440895838|gb|ELR47929.1| Mediator of RNA polymerase II transcription subunit 23 [Bos grunniens
mutus]
Length = 1374
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 178/882 (20%), Positives = 340/882 (38%), Gaps = 144/882 (16%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 337 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 395
Query: 591 NSDSRKVETTRKILSFHRE-DRCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 396 -ADFLPVMKLFDLLYPEKEFIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 448
Query: 650 LQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSS 704
LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 449 LQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPM 498
Query: 705 AGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG--- 757
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 499 GALVETIYGNGIMRIPLPGTSCLASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAH 558
Query: 758 --GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNY 812
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +Y
Sbjct: 559 AKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSY 616
Query: 813 RL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQR 863
R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 617 RMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQF 671
Query: 864 DFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQ 920
F + S E +E LNR ++ LA +D+ + + +L+ IM+ +
Sbjct: 672 TRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTP 730
Query: 921 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTY 980
H W+ TL FP L+ + + ++ + V + + S + + + +
Sbjct: 731 HNWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHF 786
Query: 981 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 1040
+ P +LC +L++ ++IN RVL + ++ T D L++
Sbjct: 787 SAQRSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVVHVRTFADFLVY--- 838
Query: 1041 VELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----IT 1094
E Q L C I + V + ++ LD L+L L R + + ++ +
Sbjct: 839 -EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLL 895
Query: 1095 LLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY----------- 1143
LL + + RV + + PEHWL + + H+++ ++Y
Sbjct: 896 LLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAE 945
Query: 1144 -------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYP 1189
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 946 QVDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHD 1005
Query: 1190 LRFSFVRDILAYFYGHLPG------KLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPP 1243
+++ + L Y+ HL KL+ I+ ++ PQ S+ +
Sbjct: 1006 RPVTYLYNTLHYYEMHLRNRESLKRKLVHAIIG-------SLKDNRPQGWCLSDTYLKNA 1058
Query: 1244 LDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQ 1303
++ N +P +Y K + A + KSP GP + R F +
Sbjct: 1059 MNARED------NPWVPDDSYYCKLIGRLSAPMAG---KSP-----GPFPNCDWR--FNE 1102
Query: 1304 NQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
+P + L +E+++L VS + ++L+ +V+ QP
Sbjct: 1103 FPNPAAHA---LHVTCVELMALAVSGQDVGNALLNVVLKSQP 1141
>gi|148672842|gb|EDL04789.1| cofactor required for Sp1 transcriptional activation, subunit 3,
isoform CRA_a [Mus musculus]
gi|148672844|gb|EDL04791.1| cofactor required for Sp1 transcriptional activation, subunit 3,
isoform CRA_a [Mus musculus]
Length = 995
Score = 58.9 bits (141), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 137/692 (19%), Positives = 271/692 (39%), Gaps = 130/692 (18%)
Query: 718 PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTR 772
P + V PLPM+LL +++ + L + + V + A+VETY+R
Sbjct: 138 PGTSCLASASVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHTKSSVALAPALVETYSR 197
Query: 773 LML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKT 826
L++ + SL F ++Q P++ G+ +LE+ ++R+ P YR Q
Sbjct: 198 LLVYMEIESLGIKGF--ISQLLPTVFKSHAWGILHTLLEMFSHRMHHIQPHYRVQ----- 250
Query: 827 LMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTE 880
L+ + + + + + + LRL L + + Q F + S E +E
Sbjct: 251 LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFLNDPKTVLSAE-SE 309
Query: 881 TLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRD 937
LNR ++ LA +D+ + + +L+ IM + H W+ TL FP+ L+
Sbjct: 310 ELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFTPHNWASHTLSCFPAPLQ- 368
Query: 938 ALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAW 997
+ + ++ + V + + S + + + + FP +LC
Sbjct: 369 ---AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIITQFSVQGFPP--LFLCLLWK 423
Query: 998 ILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKA 1056
+L++ H I +VL + +++ T D L++ E Q L
Sbjct: 424 MLLETDHISQIG----YKVLERIGARALVAHVRTFADFLVY----EFSTSAGGQQL--NK 473
Query: 1057 CANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCM 1110
C I + V + ++ LD L+L L R + + ++ + LL + + RV + +
Sbjct: 474 CIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVSDF-V 532
Query: 1111 NRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------------------PTF 1146
PEHWL S + H+S+ ++Y P +
Sbjct: 533 KENSPEHWLQSDWHTK---------HMSYHKKYPEKLYFEGLAEQVDPPVPIQSPYLPIY 583
Query: 1147 FDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYF--- 1202
F ++ R LPV ++++R +E S + +L ++ +++ + L Y+
Sbjct: 584 FGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYEMC 643
Query: 1203 ---YGHLPGKLIVRILNVFDLSKIP---FSESFPQHISSS---NPVMCPPLDYFATLLLG 1253
HL KL+ I+ ++ S+++ +H ++ NP + P Y+ L+
Sbjct: 644 LRNRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKHAMNAREDNPWV-PEDSYYCKLIGR 702
Query: 1254 LVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQL 1313
LV+ + KSP GP + R F + +P +
Sbjct: 703 LVDTMA---------------------GKSP-----GPFPNCDWR--FNEFPNPAAHA-- 732
Query: 1314 VLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
L +E+++L V + ++L+ +V+ QP
Sbjct: 733 -LHVTCVELMALAVPGKDVGNALLNVVLKSQP 763
>gi|281342638|gb|EFB18222.1| hypothetical protein PANDA_012141 [Ailuropoda melanoleuca]
Length = 1361
Score = 58.9 bits (141), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 177/882 (20%), Positives = 340/882 (38%), Gaps = 144/882 (16%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 324 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 382
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 383 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 435
Query: 650 LQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSS 704
LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 436 LQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPM 485
Query: 705 AGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG--- 757
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 486 GALVETIYGNGIMRVPLPGTSCLASASITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAH 545
Query: 758 --GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNY 812
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +Y
Sbjct: 546 AKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSY 603
Query: 813 RL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQR 863
R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 604 RMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQF 658
Query: 864 DFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQ 920
F + S E +E LNR ++ LA +D+ + + +L+ IM+ +
Sbjct: 659 TRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTP 717
Query: 921 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTY 980
H W+ TL FP L+ + + ++ + V + + S + + + +
Sbjct: 718 HNWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHF 773
Query: 981 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 1040
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 774 SMQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVY--- 825
Query: 1041 VELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----IT 1094
E Q L C I + V + ++ LD L+L L R + + ++ +
Sbjct: 826 -EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLL 882
Query: 1095 LLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY----------- 1143
LL + + RV + + PEHWL + + H+++ ++Y
Sbjct: 883 LLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAE 932
Query: 1144 -------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYP 1189
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 933 QVDPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHD 992
Query: 1190 LRFSFVRDILAYF------YGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPP 1243
+++ + L Y+ HL KL+ I+ ++ PQ S+ +
Sbjct: 993 RPVTYLYNTLHYYEMHLRERPHLKRKLVHAIIG-------SLKDNRPQGWCLSDTYLKCG 1045
Query: 1244 LDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQ 1303
++ N +P +Y + + A + KSP GP + R F +
Sbjct: 1046 MNAREE------NPWVPDDSYYCRLIGRLSAPMAG---KSP-----GPFPNCDWR--FNE 1089
Query: 1304 NQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
+P + L +E+++L VS + ++L+ +V+ QP
Sbjct: 1090 FPNPAAHA---LHVTCVELMALAVSGEDVGNALLNVVLKSQP 1128
>gi|345778719|ref|XP_003431769.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 1 [Canis lupus familiaris]
Length = 1374
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 148/736 (20%), Positives = 285/736 (38%), Gaps = 110/736 (14%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 337 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 395
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 396 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 448
Query: 650 LQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSS 704
LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 449 LQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPM 498
Query: 705 AGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG--- 757
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 499 GALVETIYGNGIMRVPLPGTSCLASASITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAH 558
Query: 758 --GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNY 812
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +Y
Sbjct: 559 AKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSY 616
Query: 813 RL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQR 863
R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 617 RMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQF 671
Query: 864 DFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQ 920
F + S E +E LNR ++ LA +D+ + + +L+ IM+ +
Sbjct: 672 TRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTP 730
Query: 921 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTY 980
H W+ TL FP L+ + + ++ + V + + S + + + +
Sbjct: 731 HNWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHF 786
Query: 981 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 1040
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 787 SMQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFS 841
Query: 1041 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1095
G L K ++ V + ++ LD L+L L R + + ++ + L
Sbjct: 842 TS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 896
Query: 1096 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1143
L + + RV + + PEHWL + + H+++ ++Y
Sbjct: 897 LKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQ 946
Query: 1144 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1190
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 947 VDPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 1006
Query: 1191 RFSFVRDILAYFYGHL 1206
+++ + L Y+ HL
Sbjct: 1007 PVTYLYNTLHYYEMHL 1022
>gi|301775290|ref|XP_002923073.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Ailuropoda melanoleuca]
Length = 1374
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 150/737 (20%), Positives = 286/737 (38%), Gaps = 112/737 (15%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 337 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 395
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 396 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 448
Query: 650 LQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSS 704
LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 449 LQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPM 498
Query: 705 AGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG--- 757
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 499 GALVETIYGNGIMRVPLPGTSCLASASITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAH 558
Query: 758 --GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNY 812
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +Y
Sbjct: 559 AKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSY 616
Query: 813 RL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQR 863
R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 617 RMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQF 671
Query: 864 DFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQ 920
F + S E +E LNR ++ LA +D+ + + +L+ IM+ +
Sbjct: 672 TRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTP 730
Query: 921 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTY 980
H W+ TL FP L+ + + ++ + V + + S + + + +
Sbjct: 731 HNWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHF 786
Query: 981 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 1040
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 787 SMQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVY--- 838
Query: 1041 VELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----IT 1094
E Q L C I + V + ++ LD L+L L R + + ++ +
Sbjct: 839 -EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLL 895
Query: 1095 LLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY----------- 1143
LL + + RV + + PEHWL + + H+++ ++Y
Sbjct: 896 LLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAE 945
Query: 1144 -------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYP 1189
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 946 QVDPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHD 1005
Query: 1190 LRFSFVRDILAYFYGHL 1206
+++ + L Y+ HL
Sbjct: 1006 RPVTYLYNTLHYYEMHL 1022
>gi|345778721|ref|XP_532052.3| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 2 [Canis lupus familiaris]
Length = 1368
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 148/736 (20%), Positives = 285/736 (38%), Gaps = 110/736 (14%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 390 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 650 LQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSS 704
LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPM 492
Query: 705 AGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG--- 757
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 493 GALVETIYGNGIMRVPLPGTSCLASASITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAH 552
Query: 758 --GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNY 812
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +Y
Sbjct: 553 AKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSY 610
Query: 813 RL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQR 863
R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 611 RMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQF 665
Query: 864 DFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQ 920
F + S E +E LNR ++ LA +D+ + + +L+ IM+ +
Sbjct: 666 TRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTP 724
Query: 921 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTY 980
H W+ TL FP L+ + + ++ + V + + S + + + +
Sbjct: 725 HNWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHF 780
Query: 981 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 1040
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 781 SMQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFS 835
Query: 1041 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1095
G L K ++ V + ++ LD L+L L R + + ++ + L
Sbjct: 836 TS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 890
Query: 1096 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1143
L + + RV + + PEHWL + + H+++ ++Y
Sbjct: 891 LKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQ 940
Query: 1144 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1190
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 941 VDPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 1000
Query: 1191 RFSFVRDILAYFYGHL 1206
+++ + L Y+ HL
Sbjct: 1001 PVTYLYNTLHYYEMHL 1016
>gi|149032921|gb|EDL87776.1| cofactor required for Sp1 transcriptional activation, subunit 3,
isoform CRA_a [Rattus norvegicus]
Length = 1113
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 145/699 (20%), Positives = 270/699 (38%), Gaps = 115/699 (16%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 340 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 398
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 647
+D V +L + E C D N PQS F +C IW ++ + + +N
Sbjct: 399 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDN 449
Query: 648 EQLQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWL 702
+LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 450 SKLQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----L 499
Query: 703 SSAGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG- 757
+ E G+ + P + V PLPM+LL +++ + L + +
Sbjct: 500 PMGALVETIYGNGIMRVPLPGTSCLASASVTPLPMNLLDSLTVHAKMSLIHSIATRVIKL 559
Query: 758 ----GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIV 810
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+
Sbjct: 560 AHTKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMF 617
Query: 811 NYRL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILS 861
++R+ P YR Q L+ + + + + + + LRL L + +
Sbjct: 618 SHRMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQP 672
Query: 862 QRDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMAT 918
Q F + S E +E LNR ++ LA +D+ + + +L+ IM
Sbjct: 673 QFTRFLNDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMTF 731
Query: 919 SQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVK 978
+ H W+ TL FP+ L+ + + ++ + V + + S + + +
Sbjct: 732 TPHNWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIIT 787
Query: 979 TYLSHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLH 1037
+ FP +LC +L++ H I +VL + +++ T D L++
Sbjct: 788 QFSMQGFPP--LFLCLLWKMLLETDHISQIG----YKVLERIGARALVAHVRTFADFLVY 841
Query: 1038 HIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV----- 1092
G L K ++ V + ++ LD L+L L R + + ++
Sbjct: 842 EFSTS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQ 896
Query: 1093 ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------- 1143
+ LL + + RV + + PEHWL S + H+S+ ++Y
Sbjct: 897 LLLLKPNDFRNRVSDF-VKENSPEHWLQSDWHTK---------HMSYHKKYPEKLYFEGL 946
Query: 1144 ---------------PTFFDDIAARLLPVIPLIVYRLIE 1167
P +F ++ R LPV ++++R +E
Sbjct: 947 AEQVDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLE 985
>gi|20805922|gb|AAM28897.1|AF507918_1 mediator subunit SUR2 [Mus musculus]
Length = 1377
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 180/889 (20%), Positives = 338/889 (38%), Gaps = 157/889 (17%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 340 WQHLSSQLIFFVLFQFASFPHMVLSLHHKLA-GRRLIKGRDHLMWVLLQFISGSIHKNAL 398
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIW-SLNTSTREYLN 646
+D V +L + E C D N PQS F +C IW LN + +
Sbjct: 399 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IWIHLNRKAQNGDS 450
Query: 647 NEQL---QKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLS 703
Q+ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 451 TLQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LP 500
Query: 704 SAGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-- 757
+ E G+ + P + V PLPM+LL +++ + L + +
Sbjct: 501 MGALVETIYGNGIMRVPLPGTSCLASASVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLA 560
Query: 758 ---GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVN 811
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +
Sbjct: 561 HTKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFS 618
Query: 812 YRL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQ 862
+R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 619 HRMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQ 673
Query: 863 RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATS 919
F + S E +E LNR ++ LA +D+ + + +L+ IM +
Sbjct: 674 FTRFLNDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFT 732
Query: 920 QHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKT 979
H W+ TL FP+ L+ + + ++ + V + + S + + +
Sbjct: 733 PHNWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIITQ 788
Query: 980 YLSHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHH 1038
+ FP +LC +L++ H I VL + + +++ T D L++
Sbjct: 789 FSVQGFPP--LFLCLLWKMLLETDHISQIG----YNVLDKIGARALVAHVRTFADFLVY- 841
Query: 1039 IHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----I 1093
E Q L K ++ V + ++ LD L+L L R + + ++ +
Sbjct: 842 ---EFSTSAGSQQ-LGKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQL 897
Query: 1094 TLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY---------- 1143
LL + + RV + + PEHWL S + H+S+ ++Y
Sbjct: 898 LLLKPNDFRNRVSDF-VKENSPEHWLQSDWHTK---------HMSYHKKYPEKLYFEGLA 947
Query: 1144 --------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYY 1188
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 948 EQVDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFH 1007
Query: 1189 PLRFSFVRDILAYF------YGHLPGKLIVRILNVFDLSKIP---FSESFPQHISSS--- 1236
+++ + L Y+ HL KL+ I+ ++ S+++ +H ++
Sbjct: 1008 DRPVTYLYNTLHYYEMCLRNRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKHAMNARED 1067
Query: 1237 NPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSE 1296
NP Y+ L+ LV+ + KSP GP E
Sbjct: 1068 NPWGSRKNSYYCKLIGRLVDTMA---------------------GKSP-----GPFPNCE 1101
Query: 1297 GRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
R F + +P + L +E+++L V + ++L+ +V+ QP
Sbjct: 1102 WR--FNEFPNPAAHA---LHVTCVELMALAVPGKDVGNALLNVVLKSQP 1145
>gi|291396968|ref|XP_002714865.1| PREDICTED: mediator complex subunit 23 [Oryctolagus cuniculus]
Length = 1377
Score = 58.2 bits (139), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 151/740 (20%), Positives = 289/740 (39%), Gaps = 104/740 (14%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 340 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 398
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 647
+D V +L + E C D N PQS F +C IW ++ + + +N
Sbjct: 399 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDN 449
Query: 648 EQLQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLS 703
+LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 450 SKLQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LP 500
Query: 704 SAGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIF--- 756
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 501 MGALVETIYGNGIMRIPLPGTSCLASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLA 560
Query: 757 --GGQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVN 811
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +
Sbjct: 561 HAKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFS 618
Query: 812 YRL---LPLYRYQ--GKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILSQRDFF 866
YR+ P YR Q TL ++ L + + LRL L + + Q F
Sbjct: 619 YRMHHIQPHYRVQLLSHLHTLAAVPQTNLNQLHLCV-ESTALRLITALGSSEVQPQFTRF 677
Query: 867 SLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTW 923
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W
Sbjct: 678 LSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNW 736
Query: 924 SEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSH 983
+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 737 ASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENEIITHFPVQ 792
Query: 984 SFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVEL 1043
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 793 GSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS- 846
Query: 1044 QRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDR 1098
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 847 AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKP 902
Query: 1099 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------- 1143
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 903 NDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVDP 952
Query: 1144 ---------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFS 1193
P +F ++ R LPV ++++R +E S + +L ++ +
Sbjct: 953 PVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVT 1012
Query: 1194 FVRDILAYFYGHLPGKLIVR 1213
++ + L Y+ HL + ++
Sbjct: 1013 YLYNTLHYYEVHLRQRAFLK 1032
>gi|338710793|ref|XP_001504341.3| PREDICTED: mediator of RNA polymerase II transcription subunit 23
[Equus caballus]
Length = 1368
Score = 57.8 bits (138), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 175/876 (19%), Positives = 339/876 (38%), Gaps = 132/876 (15%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 390 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 650 LQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSS 704
LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPM 492
Query: 705 AGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG--- 757
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 493 GALVETIYGNGIMRIPLPGMSCLASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAH 552
Query: 758 --GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNY 812
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +Y
Sbjct: 553 AKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSY 610
Query: 813 RL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQR 863
R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 611 RMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQF 665
Query: 864 DFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQ 920
F + S E +E LNR ++ LA +D+ + + +L+ IM+ +
Sbjct: 666 TRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTP 724
Query: 921 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTY 980
H W+ TL FP L+ + + ++ + V + + S + + + +
Sbjct: 725 HNWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHF 780
Query: 981 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 1040
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 781 SMQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFS 835
Query: 1041 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1095
G L K ++ V + ++ LD L+L L R + + ++ + L
Sbjct: 836 TS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 890
Query: 1096 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1143
L + + RV + + PEHWL + + H+++ ++Y
Sbjct: 891 LKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQ 940
Query: 1144 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1190
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 941 VDPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 1000
Query: 1191 RFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATL 1250
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1001 PVTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE- 1058
Query: 1251 LLGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGT 1309
N +P +Y K G +D KSP GP + R F + +P
Sbjct: 1059 -----NPWVPDDSYYCKLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAA 1102
Query: 1310 YTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
+ L +E+++L VS + ++L+ +V+ QP
Sbjct: 1103 HA---LHVTCVELMALAVSGEDVGNALLNVVLKSQP 1135
>gi|296484032|tpg|DAA26147.1| TPA: mediator complex subunit 23 [Bos taurus]
Length = 1151
Score = 57.8 bits (138), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 151/737 (20%), Positives = 286/737 (38%), Gaps = 112/737 (15%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 114 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 172
Query: 591 NSDSRKVETTRKILSFHRE-DRCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 173 -ADFLPVMKLFDLLYPEKEFIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 225
Query: 650 LQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSS 704
LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 226 LQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPM 275
Query: 705 AGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG--- 757
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 276 GALVETIYGNGIMRIPLPGTSCLASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAH 335
Query: 758 --GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNY 812
V + A+VETY+RL++ + SL F ++Q P++ G+ +LE+ +Y
Sbjct: 336 AKSSVALAPALVETYSRLLVYMEIESLGIKGF--ISQLLPTVFKSHAWGILHTLLEMFSY 393
Query: 813 RL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQR 863
R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 394 RMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQF 448
Query: 864 DFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQ 920
F + S E +E LNR ++ LA +D+ + + +L+ IM+ +
Sbjct: 449 TRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTP 507
Query: 921 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTY 980
H W+ TL FP L+ + + ++ + V + + S + + + +
Sbjct: 508 HNWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHF 563
Query: 981 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 1040
+ P +LC +L++ ++IN RVL + ++ T D L++
Sbjct: 564 SAQRSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVVHVRTFADFLVY--- 615
Query: 1041 VELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----IT 1094
E Q L C I + V + ++ LD L+L L R + + ++ +
Sbjct: 616 -EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLL 672
Query: 1095 LLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY----------- 1143
LL + + RV + + PEHWL + + H+++ ++Y
Sbjct: 673 LLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAE 722
Query: 1144 -------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYP 1189
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 723 QVDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHD 782
Query: 1190 LRFSFVRDILAYFYGHL 1206
+++ + L Y+ HL
Sbjct: 783 RPVTYLYNTLHYYEMHL 799
>gi|380022930|ref|XP_003695286.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 23-like [Apis florea]
Length = 1355
Score = 57.8 bits (138), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 128/666 (19%), Positives = 262/666 (39%), Gaps = 116/666 (17%)
Query: 730 PLPMSLLTGFSLNLCLKLALQMEDSIFGG-----QVVASIAMVETYTRLMLLAP-HSLFR 783
PL MS+L +++ + L + + + + A+VETY+RL++ SL
Sbjct: 538 PLSMSILDSLTVHSKMSLIHSIVTHVIKSAQSKSNMALAPALVETYSRLLVYTEIESLGI 597
Query: 784 SLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKIISAL 838
F ++Q P++ G +LE+ +YR+ P YR Q L+ + + +
Sbjct: 598 KGF--ISQLLPTVFKSHAWGTLYTLLEMFSYRMHHIQPHYRVQ-----LLSHLHSLAAVP 650
Query: 839 KVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAI 892
+ + + LRL L + Q F + + S E +E LNR V+ LA
Sbjct: 651 QTNQTQLHLCVESTALRLITGLGSAEVQPQLSRFLSEPKTLVSAE-SEELNRALVLTLAR 709
Query: 893 IIKTRGIADADHV-LYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQ 951
+ G H + + +L IM + H+W+ TL+ FP +L + + + +
Sbjct: 710 SMHVTGTGSDSHSGTWCKELLNTIMLNTPHSWANHTLQCFPPVLSEFF----QQNSVPKE 765
Query: 952 AWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSAN 1011
QQ + V + S S + + + P +LC I+ + + S
Sbjct: 766 NKQQIKKAVEEEYRNWASMSNENDIIAHFSVPGTPP--LFLCLLWKIIFET---DRISPI 820
Query: 1012 LLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLP 1071
++L +++++ D L+ + H + K ++ + + ++
Sbjct: 821 AYKILERIGARALSAHLRKFCDYLVFEFANSVGGQH-----VNKCVDTVNDMIWKYNIVT 875
Query: 1072 LDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKR 1126
+D L+L L+ R + ++ + LL E + R + + + PEHW S
Sbjct: 876 IDRLILCLVLRTHEGSDAQVCFFIIQLLLLKAIEFRNRAQEF-VKENSPEHWKQSNWH-- 932
Query: 1127 VELQKALGNHLSWKERY-------------------PTFFDDIAARLLPVIPLIVYRLIE 1167
+K L H + E++ P +F ++ R LPV ++V+R +E
Sbjct: 933 ---EKHLAFHRKFPEKFAPEGIMEQTSGGPSQYQSLPVYFGNVCLRFLPVFDIVVHRYLE 989
Query: 1168 NDAM-DSADRVLATYSSFLAYYPLRFSFVRDILAYFYGH------LPGKLIVRILNVFDL 1220
A+ S + +L ++ +++ + L Y+ L +L+ +L
Sbjct: 990 IPAVSKSLETLLEHLGCLYKFHDRPVTYLYNTLHYYERKLRDRPPLKRRLVSAVLGSLRE 1049
Query: 1221 SKIP---FSESFPQHIS-SSNPVMC--PPLDYFATLLLGLVNNVIPALNYNSKSGSTMDA 1274
+ P SE++ +++ SS+ V+ P LDY+ L+ +V
Sbjct: 1050 IRAPGWALSEAYQMYMTRSSDDVVSWMPELDYYIRLVRRIVE------------------ 1091
Query: 1275 SLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVS 1334
+ SG ++ F + +P + L +E++++PV+ + + +
Sbjct: 1092 ------------TMSGTAHFPATDWRFNEFPNPAAHA---LYVTCVELMAVPVAPNIVAN 1136
Query: 1335 SLVQIV 1340
SL+ +V
Sbjct: 1137 SLLDVV 1142
>gi|383853263|ref|XP_003702142.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Megachile rotundata]
Length = 1341
Score = 57.8 bits (138), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 127/666 (19%), Positives = 259/666 (38%), Gaps = 116/666 (17%)
Query: 730 PLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTRLMLLAP-HSLFR 783
PL MS+L +++ + L + + + + A+VETY+RL++ SL
Sbjct: 524 PLSMSILDSLTVHSKMSLIHSIVTHVIKLAQSKSNMALAPALVETYSRLLVYTEIESLGI 583
Query: 784 SLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKIISAL 838
F ++Q P++ G +LE+ +YR+ P YR Q L+ + + +
Sbjct: 584 KGF--ISQLLPTVFKSHAWGTLYTLLEMFSYRMHHIQPHYRVQ-----LLSHLHSLAAVP 636
Query: 839 KVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAI 892
+ + + LRL L + Q F + + S E +E LNR V+ LA
Sbjct: 637 QTNQTQLHLCVESTALRLITGLGSAEVQPQLSRFLSEPKTLVSAE-SEELNRALVLTLAR 695
Query: 893 IIKTRGIADADHV-LYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQ 951
+ G H + + +L IM + H+W+ TL+ FP +L + + + +
Sbjct: 696 SMHVTGTGSDSHSGTWCKELLNTIMQNTPHSWANHTLQCFPPVLSEFF----QQNSVPKE 751
Query: 952 AWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSAN 1011
QQ + V + S S + + + P +LC ++ + + S
Sbjct: 752 NKQQIKKAVEEEYRNWASMSNENDIIAHFSVPGTPP--LFLCLLWKMIFET---DRISPI 806
Query: 1012 LLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLP 1071
++L +++++ D L+ + H + K I+ + + ++
Sbjct: 807 AYKILERIGARALSAHLRKFCDYLVFEFANSVGGQH-----VNKCVDTINDMIWKYNIVT 861
Query: 1072 LDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKR 1126
+D L+L L+ R + ++ + LL E + RV+ + + PEHW S
Sbjct: 862 IDRLILCLVLRTHEGSEAQVCFFIIQLLLLKAIEFRNRVQEF-VKENSPEHWKQSNWH-- 918
Query: 1127 VELQKALGNHLSWKERY-------------------PTFFDDIAARLLPVIPLIVYRLIE 1167
+K L H + E++ P +F ++ R LPV ++V+R +E
Sbjct: 919 ---EKHLAFHRKFPEKFAPEGIMEQASGGPSQYQSLPVYFGNVCLRFLPVFDIVVHRYLE 975
Query: 1168 NDAM-DSADRVLATYSSFLAYYPLRFSFVRDILAYFYGH------LPGKLIVRILNVF-- 1218
A+ S + +L ++ +++ + L Y+ L +L++ +L
Sbjct: 976 IPAVSKSLETLLEHLGCLYKFHDRPVTYLYNTLHYYERKLRDNPPLKRRLVLAVLGSLRE 1035
Query: 1219 -DLSKIPFSESFPQHISSSNP---VMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDA 1274
S SE++ +++ S P LDY+ L+ +V
Sbjct: 1036 IRASGWALSEAYQMYMTRSTDDVVTWLPELDYYIRLVQRIVE------------------ 1077
Query: 1275 SLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVS 1334
+ SG ++ F + +P + L +E++++PV+ + + +
Sbjct: 1078 ------------TMSGTAHFPATDWRFNEFPNPAAHA---LYVTCVELMAVPVAPNLVAN 1122
Query: 1335 SLVQIV 1340
SL+ +V
Sbjct: 1123 SLLDVV 1128
>gi|426234781|ref|XP_004011370.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 1 [Ovis aries]
Length = 1368
Score = 57.4 bits (137), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 148/736 (20%), Positives = 285/736 (38%), Gaps = 110/736 (14%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHRE-DRCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 390 -ADFLPVMKLFDLLYPEKEFIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 650 LQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSS 704
LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPM 492
Query: 705 AGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG--- 757
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 493 GALVETIYGNGIMRIPLPGTSCLASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAH 552
Query: 758 --GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNY 812
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +Y
Sbjct: 553 AKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSY 610
Query: 813 RL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQR 863
R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 611 RMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQF 665
Query: 864 DFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQ 920
F + S E +E LNR ++ LA +D+ + + +L+ IM+ +
Sbjct: 666 TRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTP 724
Query: 921 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTY 980
H W+ TL FP L+ + + ++ + V + + S + + + +
Sbjct: 725 HNWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHF 780
Query: 981 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 1040
+ P +LC +L++ ++IN RVL + ++ T D L++
Sbjct: 781 SAQRSPP--LFLCLLWKMLLET--DHINQIG-FRVLERIGARALVVHVRTFADFLVYEFS 835
Query: 1041 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1095
G L K ++ V + ++ LD L+L L R + + ++ + L
Sbjct: 836 TS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 890
Query: 1096 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1143
L + + RV + + PEHWL + + H+++ ++Y
Sbjct: 891 LKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQ 940
Query: 1144 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1190
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 941 VDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 1000
Query: 1191 RFSFVRDILAYFYGHL 1206
+++ + L Y+ HL
Sbjct: 1001 PVTYLYNTLHYYEMHL 1016
>gi|426234783|ref|XP_004011371.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 2 [Ovis aries]
Length = 1374
Score = 57.4 bits (137), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 148/736 (20%), Positives = 285/736 (38%), Gaps = 110/736 (14%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 337 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 395
Query: 591 NSDSRKVETTRKILSFHRE-DRCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 396 -ADFLPVMKLFDLLYPEKEFIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 448
Query: 650 LQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSS 704
LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 449 LQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPM 498
Query: 705 AGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG--- 757
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 499 GALVETIYGNGIMRIPLPGTSCLASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAH 558
Query: 758 --GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNY 812
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +Y
Sbjct: 559 AKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSY 616
Query: 813 RL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQR 863
R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 617 RMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQF 671
Query: 864 DFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQ 920
F + S E +E LNR ++ LA +D+ + + +L+ IM+ +
Sbjct: 672 TRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTP 730
Query: 921 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTY 980
H W+ TL FP L+ + + ++ + V + + S + + + +
Sbjct: 731 HNWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHF 786
Query: 981 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 1040
+ P +LC +L++ ++IN RVL + ++ T D L++
Sbjct: 787 SAQRSPP--LFLCLLWKMLLET--DHINQIG-FRVLERIGARALVVHVRTFADFLVYEFS 841
Query: 1041 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1095
G L K ++ V + ++ LD L+L L R + + ++ + L
Sbjct: 842 TS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 896
Query: 1096 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1143
L + + RV + + PEHWL + + H+++ ++Y
Sbjct: 897 LKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQ 946
Query: 1144 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1190
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 947 VDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 1006
Query: 1191 RFSFVRDILAYFYGHL 1206
+++ + L Y+ HL
Sbjct: 1007 PVTYLYNTLHYYEMHL 1022
>gi|66561865|ref|XP_395793.2| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 1 [Apis mellifera]
Length = 1355
Score = 57.4 bits (137), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 128/666 (19%), Positives = 262/666 (39%), Gaps = 116/666 (17%)
Query: 730 PLPMSLLTGFSLNLCLKLALQMEDSIFGG-----QVVASIAMVETYTRLMLLAP-HSLFR 783
PL MS+L +++ + L + + + + A+VETY+RL++ SL
Sbjct: 538 PLSMSILDSLTVHSKMSLIHSIVTHVIKSAQSKSNMALAPALVETYSRLLVYTEIESLGI 597
Query: 784 SLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKIISAL 838
F ++Q P++ G +LE+ +YR+ P YR Q L+ + + +
Sbjct: 598 KGF--ISQLLPTVFKSHAWGTLYTLLEMFSYRMHHIQPHYRVQ-----LLSHLHSLAAVP 650
Query: 839 KVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAI 892
+ + + LRL L + Q F + + S E +E LNR V+ LA
Sbjct: 651 QTNQTQLHLCVESTALRLITGLGSAEVQPQLSRFLSEPKTLVSAE-SEELNRALVLTLAR 709
Query: 893 IIKTRGIADADHV-LYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQ 951
+ G H + + +L IM + H+W+ TL+ FP +L + + + +
Sbjct: 710 SMHVTGTGSDSHSGTWCKELLNTIMLNTPHSWANHTLQCFPPVLSEFF----QQNSVPKE 765
Query: 952 AWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSAN 1011
QQ + V + S S + + + P +LC I+ + + S
Sbjct: 766 NKQQIKKAVEEEYRNWASMSNENDIIAHFSVPGTPP--LFLCLLWKIIFET---DRISPI 820
Query: 1012 LLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLP 1071
++L +++++ D L+ + H + K ++ + + ++
Sbjct: 821 AYKILERIGARALSAHLRKFCDYLVFEFANSVGGQH-----VNKCVDTVNDMIWKYNIVT 875
Query: 1072 LDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKR 1126
+D L+L L+ R + ++ + LL E + R + + + PEHW S
Sbjct: 876 IDRLILCLVLRTHEGSDAQVCFFIIQLLLLKAIEFRNRAQEF-VKENSPEHWKQSNWH-- 932
Query: 1127 VELQKALGNHLSWKERY-------------------PTFFDDIAARLLPVIPLIVYRLIE 1167
+K L H + E++ P +F ++ R LPV ++V+R +E
Sbjct: 933 ---EKHLAFHRKFPEKFAPEGIMEQTSGGPSQYQSLPVYFGNVCLRFLPVFDIVVHRYLE 989
Query: 1168 NDAM-DSADRVLATYSSFLAYYPLRFSFVRDILAYFYGH------LPGKLIVRILNVFDL 1220
A+ S + +L ++ +++ + L Y+ L +L+ +L
Sbjct: 990 IPAVSKSLETLLEHLGCLYKFHDRPVTYLYNTLHYYERKLRDRPPLKRRLVSAVLGSLRE 1049
Query: 1221 SKIP---FSESFPQHIS-SSNPVMC--PPLDYFATLLLGLVNNVIPALNYNSKSGSTMDA 1274
+ P SE++ +++ SS+ V+ P LDY+ L+ +V
Sbjct: 1050 IRAPGWALSEAYQMYMTRSSDDVVSWMPELDYYIRLVRRIVE------------------ 1091
Query: 1275 SLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVS 1334
+ SG ++ F + +P + L +E++++PV+ + + +
Sbjct: 1092 ------------TMSGTAHFPATDWRFNEFPNPAAHA---LYVTCVELMAVPVAPNIVAN 1136
Query: 1335 SLVQIV 1340
SL+ +V
Sbjct: 1137 SLLDVV 1142
>gi|350578133|ref|XP_001925537.4| PREDICTED: mediator of RNA polymerase II transcription subunit 23,
partial [Sus scrofa]
Length = 1321
Score = 57.4 bits (137), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 148/736 (20%), Positives = 285/736 (38%), Gaps = 110/736 (14%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 284 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 342
Query: 591 NSDSRKVETTRKILSFHRE-DRCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 343 -ADFLPVMKLFDLLYPEKEFIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 395
Query: 650 LQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSS 704
LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 396 LQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPM 445
Query: 705 AGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG--- 757
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 446 GALVETIYGNGIMRIPLPGTSCLASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAH 505
Query: 758 --GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNY 812
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +Y
Sbjct: 506 AKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSY 563
Query: 813 RL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQR 863
R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 564 RMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQF 618
Query: 864 DFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQ 920
F + S E +E LNR ++ LA +D+ + + +L+ IM+ +
Sbjct: 619 TRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTP 677
Query: 921 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTY 980
H W+ TL FP L+ + + ++ + V + + S + + + +
Sbjct: 678 HNWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHF 733
Query: 981 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 1040
+ P +LC +L++ ++IN RVL + ++ T D L++
Sbjct: 734 SAQRSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVVHVRTFADFLVYEFS 788
Query: 1041 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1095
G L K ++ V + ++ LD L+L L R + + ++ + L
Sbjct: 789 TS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 843
Query: 1096 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1143
L + + RV + + PEHWL + + H+++ ++Y
Sbjct: 844 LKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQ 893
Query: 1144 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1190
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 894 VDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 953
Query: 1191 RFSFVRDILAYFYGHL 1206
+++ + L Y+ HL
Sbjct: 954 PVTYLYNTLHYYEMHL 969
>gi|329664782|ref|NP_001192691.1| mediator of RNA polymerase II transcription subunit 23 [Bos taurus]
Length = 1368
Score = 57.0 bits (136), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 150/737 (20%), Positives = 286/737 (38%), Gaps = 112/737 (15%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 591 NSDSRKVETTRKILSFHRE-DRCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 390 -ADFLPVMKLFDLLYPEKEFIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 650 LQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSS 704
LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPM 492
Query: 705 AGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG--- 757
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 493 GALVETIYGNGIMRIPLPGTSCLASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAH 552
Query: 758 --GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNY 812
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +Y
Sbjct: 553 AKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSY 610
Query: 813 RL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQR 863
R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 611 RMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQF 665
Query: 864 DFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQ 920
F + S E +E LNR ++ LA +D+ + + +L+ IM+ +
Sbjct: 666 TRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTP 724
Query: 921 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTY 980
H W+ TL FP L+ + + ++ + V + + S + + + +
Sbjct: 725 HNWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHF 780
Query: 981 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 1040
+ P +LC +L++ ++IN RVL + ++ T D L++
Sbjct: 781 SAQRSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVVHVRTFADFLVY--- 832
Query: 1041 VELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----IT 1094
E Q L C I + V + ++ LD L+L L R + + ++ +
Sbjct: 833 -EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLL 889
Query: 1095 LLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY----------- 1143
LL + + RV + + PEHWL + + H+++ ++Y
Sbjct: 890 LLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAE 939
Query: 1144 -------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYP 1189
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 940 QVDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHD 999
Query: 1190 LRFSFVRDILAYFYGHL 1206
+++ + L Y+ HL
Sbjct: 1000 RPVTYLYNTLHYYEMHL 1016
>gi|345328526|ref|XP_001505931.2| PREDICTED: mediator of RNA polymerase II transcription subunit 23
[Ornithorhynchus anatinus]
Length = 1333
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 151/737 (20%), Positives = 290/737 (39%), Gaps = 112/737 (15%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 294 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 352
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 647
+D V +L + E C D N PQS F +C IW ++ + + +N
Sbjct: 353 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDN 403
Query: 648 EQLQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETV-MNWL 702
+LQ ++ + Q S ++ + M+D + + T ++ C T+ M L
Sbjct: 404 SKLQIPIPHSLKLHHEFLQQSLCNKTL---QMNDYKIALLCNAYSTNSE--CFTLPMGVL 458
Query: 703 SSAGVTELFPGSNLP---PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-- 757
V ++ N+ P M + PLPM+LL +++ + L + +
Sbjct: 459 ----VETIYGNGNMRISLPGISCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLA 514
Query: 758 ---GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVN 811
+ + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +
Sbjct: 515 HAKSSLALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFS 572
Query: 812 YRL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQ 862
YR+ P YR Q L+ + + S + + + LRL L + + Q
Sbjct: 573 YRMHHIQPHYRVQ-----LLSQLHSLASVPQTNQNQLHLCVESTALRLITALGSSEVQPQ 627
Query: 863 RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATS 919
F + S E +E LNR ++ LA +D+ + + +L+ IM+ +
Sbjct: 628 FTRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFT 686
Query: 920 QHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKT 979
H W+ TL FP+ L+ + + ++ + V + + S + + +
Sbjct: 687 PHNWALHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITH 742
Query: 980 YLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHI 1039
+ P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 743 FSMQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLDRIGARALVAHVRTFADFLVYEF 797
Query: 1040 HVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----IT 1094
G L K ++ V + ++ LD L+L L R + + ++ +
Sbjct: 798 STS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLL 852
Query: 1095 LLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY----------- 1143
LL + + RV + + PEHWL + + H+S+ ++Y
Sbjct: 853 LLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMSYHKKYPEKLYFEGLAE 902
Query: 1144 -------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYP 1189
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 903 QVNPPMQIQPSYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHD 962
Query: 1190 LRFSFVRDILAYFYGHL 1206
+++ + L Y+ HL
Sbjct: 963 RPVTYLYNTLHYYELHL 979
>gi|390359540|ref|XP_003729501.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like isoform 1 [Strongylocentrotus purpuratus]
gi|390359542|ref|XP_799077.3| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like isoform 2 [Strongylocentrotus purpuratus]
Length = 1365
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 109/529 (20%), Positives = 214/529 (40%), Gaps = 83/529 (15%)
Query: 730 PLPMSLLTGFSLNLCLKLALQMEDSIFGGQ----VVASIAMVETYTRLML------LAPH 779
P+P+SLL +++ + + + + I S A+VETY+RL+ L
Sbjct: 533 PIPLSLLDSLTVHAKMSVIHLIVNKILQWHKHPGTALSPALVETYSRLLAYIEIESLGIK 592
Query: 780 SLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKIIS 836
S+F + + + G+ +LE+++YRL P +R Q L+ ++ + +
Sbjct: 593 GFTCSVFPKVCE-----VRAWGILNTLLELLSYRLHHIQPHFRVQ-----LLCNLHNLST 642
Query: 837 ALKVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIAL 890
+ + LR+ +L + Q F L + + ++ +E LNR V+ L
Sbjct: 643 LPQANHNQLFYCIESTALRIITSLGSAEVQPQLSRF-LNQPKQLLSQESEELNRAVVLTL 701
Query: 891 AIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGR---IDKRG 947
A + G + + +L +++ + H+W+ TL+ FPS L+ + RG
Sbjct: 702 ARAMHVTG-SQTLSGSWCTDILSTLVSNTPHSWASHTLKCFPSALQSFFEQHNMPTEMRG 760
Query: 948 L--TIQAWQQAETTVINQCTQL--LSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGH 1003
L I+ T++I++ +L S + P Y +LC +L+
Sbjct: 761 LKRAIEDEYNRWTSMISEAERLHHFSNPSTPPY--------------FLCIIWKMLLVMD 806
Query: 1004 PENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFF 1063
E I + ++++L P ++ +I T D L+ H + ++
Sbjct: 807 TERI-TPTVVKILELIGPRGLSRHIRTFADYLVCEFSTSAGGQH-----VNMCVEKLNAM 860
Query: 1064 VLTHELLPLDILLLALIDRDDDPHALR-----IVITLLDRQELQQRVKLYCMNRGPPEHW 1118
V ++ LD L+L+L R + + + I + +L E + RV + + PEHW
Sbjct: 861 VWKLNIITLDRLVLSLALRSHEGNEAQVGFFIIQLLILKPNEFRTRVSDF-VKENSPEHW 919
Query: 1119 L--------------YSGLFKRVELQKALGNHLSWKERY-PTFFDDIAARLLPVIPLIVY 1163
Y F L + G L+ +Y P +F ++ R LPV ++++
Sbjct: 920 TQSDWHSKHMAYHRKYPEKFFYEGLCEETGATLTTTPQYLPVYFSNVCLRFLPVFDILIH 979
Query: 1164 RLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHL---PG 1208
R +E S + +L ++ +++ + L Y+ L PG
Sbjct: 980 RFLELPPVTKSLETILEHLGCLFKFHDRPVTYLFNTLHYYEKKLRERPG 1028
>gi|351714469|gb|EHB17388.1| Mediator of RNA polymerase II transcription subunit 23
[Heterocephalus glaber]
Length = 1035
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 119/616 (19%), Positives = 248/616 (40%), Gaps = 97/616 (15%)
Query: 718 PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTR 772
P + + PLPM+LL +++ + L + + V + A+VETY+R
Sbjct: 439 PGTSCLASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSVALAPALVETYSR 498
Query: 773 LML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKT 826
L++ + SL + ++Q P++ G+ +LE+ +YR+ P YR Q
Sbjct: 499 LLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQ----- 551
Query: 827 LMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTE 880
L+ + + + + + + LRL L + + Q F + S E +E
Sbjct: 552 LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFLSDPKTVLSAE-SE 610
Query: 881 TLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRD 937
LNR ++ LA +D+ + + +L+ IM+ + H W+ TL FP L+
Sbjct: 611 ELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNWASHTLSCFPGPLQ- 669
Query: 938 ALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAW 997
+ + ++ + V + + S + + + + P +LC
Sbjct: 670 ---AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHFSIQGSPP--LFLCLLWK 724
Query: 998 ILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKAC 1057
+L++ ++IN RVL + +++ T D L++ E Q L C
Sbjct: 725 MLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVY----EFSTSAGGQQL--NKC 775
Query: 1058 ANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCMN 1111
I + V + ++ LD L+L L R + + ++ + LL + + RV + +
Sbjct: 776 IEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVSDF-VK 834
Query: 1112 RGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------------------PTFF 1147
PEHWL + + H+++ ++Y P +F
Sbjct: 835 ENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVDPPVQIQSPYLPIYF 885
Query: 1148 DDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYF---- 1202
++ R LPV ++++R +E S + +L ++ +++ + L Y+
Sbjct: 886 GNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYERYL 945
Query: 1203 --YGHLPGKLIVRILNVFDLSKIP---FSESFPQHI---SSSNPVMCPPLDYFATLLLGL 1254
HL KL+ I+ ++ S+++ +++ NP + P Y+ L+ L
Sbjct: 946 RNRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKNVMNPREDNPWV-PDDSYYCKLIGRL 1004
Query: 1255 VNNVIPALNYNSKSGS 1270
V+N++ + + + S +
Sbjct: 1005 VDNILQIVTFCTLSNN 1020
>gi|332023546|gb|EGI63782.1| Mediator of RNA polymerase II transcription subunit 23 [Acromyrmex
echinatior]
Length = 1357
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 126/666 (18%), Positives = 260/666 (39%), Gaps = 116/666 (17%)
Query: 730 PLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTRLMLLAP-HSLFR 783
PL MS+L +++ + L + + + + A+VETY+RL++ SL
Sbjct: 540 PLSMSILDSLTVHSKMSLIHSIVTHVIKLAQSKSNMALAPALVETYSRLLVYTEIESLGI 599
Query: 784 SLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKIISAL 838
F ++Q P++ G +LE+ +YR+ P YR Q L+ + + +
Sbjct: 600 KGF--ISQLLPTVFKSHAWGTLYTLLEMFSYRMHHIQPHYRVQ-----LLSHLHSLAAVP 652
Query: 839 KVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAI 892
+ + + LRL L + Q F + + S E +E LNR V+ LA
Sbjct: 653 QTNQTQLHLCVESTALRLITGLGSAEVQPQLSRFLSEPKTLVSAE-SEELNRALVLTLAR 711
Query: 893 IIKTRGI-ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQ 951
+ G AD+ + + +L IM + H+W+ TL+ FP +L + + + +
Sbjct: 712 SMHVTGTGADSLSGTWCKELLNTIMQNTPHSWANHTLQCFPPVLSEFF----QQNSVAKE 767
Query: 952 AWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSAN 1011
QQ + V + S + + + + P +LC ++++ + S
Sbjct: 768 NKQQIKKAVEEEYRNWASMNNENDIIAHFSVPGTPP--LFLCLLWKMILET---DRISPI 822
Query: 1012 LLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLP 1071
+ ++L +++++ D L+ + H + K I+ + + ++
Sbjct: 823 VYKILERIGARALSAHLRKFCDYLVFEFANSVGGQH-----VNKCVDTINDMIWKYNIVT 877
Query: 1072 LDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKR 1126
+D L+L L R + + ++ + LL E + RV+ + + PEHW S
Sbjct: 878 IDRLVLCLALRTQEGNEAQVCFFIIQLLLLKAAEFRNRVQEF-VKENSPEHWKQSNWH-- 934
Query: 1127 VELQKALGNHLSWKERY-------------------PTFFDDIAARLLPVIPLIVYRLIE 1167
+K L H + E++ P +F ++ R LPV ++V+R +E
Sbjct: 935 ---EKHLAFHRKFPEKFAPEGIMEQTSGGPSQYQNLPVYFGNVCLRFLPVFDIVVHRYLE 991
Query: 1168 -NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGH------LPGKLIVRILNVFDL 1220
+ S + +L ++ +++ + L Y+ L +L+ +L
Sbjct: 992 IPPVIKSLEILLEHLGCLYKFHDRPVTYLYNTLHYYEKKLRDRPLLKRRLVSAVLGSLRE 1051
Query: 1221 SKIP---FSESFPQHISSSNP---VMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDA 1274
+ P SE++ +++ N P LDY+ L+ +V
Sbjct: 1052 IRAPGWALSEAYQMYMTRFNDDAVSWVPELDYYIRLVQRIVE------------------ 1093
Query: 1275 SLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVS 1334
+ SG ++ F + +P + L +E+++LPV+ + +
Sbjct: 1094 ------------TMSGTAHFPATDWRFNEFPNPAAHA---LYVTCVELMALPVAPDAVAN 1138
Query: 1335 SLVQIV 1340
L+ +V
Sbjct: 1139 FLLDVV 1144
>gi|242019825|ref|XP_002430359.1| CRSP complex subunit, putative [Pediculus humanus corporis]
gi|212515483|gb|EEB17621.1| CRSP complex subunit, putative [Pediculus humanus corporis]
Length = 1371
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 132/684 (19%), Positives = 269/684 (39%), Gaps = 125/684 (18%)
Query: 713 GSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASI-----AMV 767
S+LPP PL M++L +++ + L + + SI A+V
Sbjct: 511 SSSLPPGP-------TTPLSMAILDSLTVHSKMSLIHSIVTHVVKQAQSKSILALAPALV 563
Query: 768 ETYTRLMLLAP-HSL-FRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRY 820
ETY+RL++ SL + SHL P++ G+ +LE+ +YR+ P YR
Sbjct: 564 ETYSRLLVYTEIESLGIKGFISHLL---PTVFKHHAWGILYTLLEMFSYRMHHIQPHYRV 620
Query: 821 QGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKG 874
Q L+ + + + + + + LRL L + Q F + +
Sbjct: 621 Q-----LLSHLHSLAAVPQTNQTQLHLCVESTALRLITGLGSAEVQPQLSRFLNEPKTLV 675
Query: 875 STEFTETLNRITVIALAIIIKTRGI-ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPS 933
S E +E LNR V+ LA + G +D+ + + +L IM + H+W+ TL+ FP
Sbjct: 676 SAE-SEELNRALVLTLARSMHVTGTGSDSISGTWCKELLSTIMQNTPHSWANHTLQCFPL 734
Query: 934 LLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLC 993
L D + + Q + V + S + + + + P ++C
Sbjct: 735 ALHDFF----QHSPVQKENKPQLKKAVEEEYRNWASMNNENDIIAHFSVAGTPP--LFIC 788
Query: 994 AGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLL 1053
++++ + I S ++L +++++ D L+ + +S +
Sbjct: 789 LLWKMILET--DRITSIA-YKILERIGARALSAHLRKFCDYLV------FEFANSRGEQH 839
Query: 1054 FKACAN-ISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKL 1107
C + ++ + + ++ +D L+L L R + ++ + LL EL+ RV+
Sbjct: 840 VNKCVDALNDMIWKYNIVTIDRLVLCLALRTQEGSEAQVCFFIIQLLLLKAAELRNRVQD 899
Query: 1108 YCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-------------------PTFFD 1148
+ + PEHW S +K L H + E++ P +F
Sbjct: 900 F-VKENSPEHWKQSNWH-----EKHLAFHRKYPEKFAPEGILEQSGGASSPYHSLPVYFG 953
Query: 1149 DIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGH-- 1205
++ R LPV ++++R +E S + +L ++ +++ + L Y+ +
Sbjct: 954 NVCLRFLPVFDIVIHRYLELPPVTKSLETLLEHLGCLYKFHDRPVTYLYNTLHYYDRNLR 1013
Query: 1206 ----LPGKLIVRILNVFDLSKIP---FSESFPQHISSSNPVMC--PPLDYFATLLLGLVN 1256
L +L+ IL + P SE++ ++S S + P LDY+ + L+
Sbjct: 1014 DRPVLKRRLVAAILGALKDIRPPGWSLSEAYINYMSGSGDEVSWLPDLDYY----IKLIR 1069
Query: 1257 NVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLE 1316
++ +N + + D F + +P + L
Sbjct: 1070 RIVETMNGSKAHFPSTDW-------------------------RFNEFPNPAAHA---LY 1101
Query: 1317 TAVIEILSLPVSASQIVSSLVQIV 1340
+E++++PVS S + ++L+ +V
Sbjct: 1102 VTCVELMAVPVSPSVVANNLLDVV 1125
>gi|431838801|gb|ELK00731.1| Mediator of RNA polymerase II transcription subunit 23 [Pteropus
alecto]
Length = 1093
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 148/736 (20%), Positives = 284/736 (38%), Gaps = 110/736 (14%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 334 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 392
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 393 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 445
Query: 650 LQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSS 704
LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 446 LQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPM 495
Query: 705 AGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG--- 757
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 496 GALVETIYGNGIMRVPLPGTSCLASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAH 555
Query: 758 --GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNY 812
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +Y
Sbjct: 556 AKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSY 613
Query: 813 RL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQR 863
R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 614 RMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQF 668
Query: 864 DFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQ 920
F + S E +E LNR ++ LA +D+ + + +L+ IM+ +
Sbjct: 669 TRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTP 727
Query: 921 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTY 980
H W+ TL FP L+ + + ++ + V + + S + + + +
Sbjct: 728 HNWASHTLSCFPGPLQ----AFFQQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHF 783
Query: 981 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 1040
P +LC +L+ ++IN RVL + +++ T D L++
Sbjct: 784 SMQGSPP--LFLCLLWKMLLDT--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFS 838
Query: 1041 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1095
G L K ++ V + ++ LD L+L L R + + ++ + L
Sbjct: 839 TS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 893
Query: 1096 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1143
L + + RV + + PEHWL + + H+++ ++Y
Sbjct: 894 LKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQ 943
Query: 1144 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1190
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 944 VDPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 1003
Query: 1191 RFSFVRDILAYFYGHL 1206
+++ + L Y+ HL
Sbjct: 1004 PVTYLYNTLHYYEMHL 1019
>gi|307208429|gb|EFN85808.1| Mediator of RNA polymerase II transcription subunit 23 [Harpegnathos
saltator]
Length = 1307
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 127/668 (19%), Positives = 262/668 (39%), Gaps = 116/668 (17%)
Query: 730 PLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTRLMLLAP-HSLFR 783
PL MS+L +++ + L + + + + A+VETY+RL++ SL
Sbjct: 490 PLSMSILDSLTVHSKMSLIHSIVTHVIKLAQSKSNMALAPALVETYSRLLVYTEIESLGI 549
Query: 784 SLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKIISAL 838
F ++Q P++ G +LE+ +YR+ P YR Q L+ + + +
Sbjct: 550 KGF--ISQLLPTVFKSHAWGTLYTLLEMFSYRMHHIQPHYRVQ-----LLSHLHSLAAVP 602
Query: 839 KVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAI 892
+ + + LRL L + Q F + + S E +E LNR V+ LA
Sbjct: 603 QTNQTQLHLCVESTALRLITGLGSAEVQPQLSRFLSEPKTLVSAE-SEELNRALVLTLAR 661
Query: 893 IIKTRGI-ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQ 951
+ G A+ + + +L IM + H+W+ TL FP +L + + + +
Sbjct: 662 SMHVTGTGAETLSGTWCKDLLNTIMQNTPHSWAYHTLECFPPVLSEFF----QQNSVAKE 717
Query: 952 AWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSAN 1011
QQ + V + S S + + + P +LC ++++ + S
Sbjct: 718 NKQQIKKAVEEEYRNWASMSNENDIIAHFSVPGTPP--LFLCLLWKMILEI---DRISPI 772
Query: 1012 LLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLP 1071
++L +++++ D L+ + H + K I+ + + ++
Sbjct: 773 AYKILERIGARALSAHLRKFCDYLVFEFANSVGGQH-----VNKCVDTINDMIWKYNIVT 827
Query: 1072 LDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKR 1126
+D L+L L R + ++ + LL E + RV+ + + PEHW S
Sbjct: 828 IDRLVLCLALRTQEGSEAQVCFFIIQLLLLKSAEFRNRVQEF-VKENSPEHWKQSNWH-- 884
Query: 1127 VELQKALGNHLSWKERY-------------------PTFFDDIAARLLPVIPLIVYRLIE 1167
+K L H + E++ P +F ++ R LPV ++V+R +E
Sbjct: 885 ---EKHLAFHRKFPEKFAPEGIMEQTSGGPSQYQSLPVYFGNVCLRFLPVFDIVVHRYLE 941
Query: 1168 -NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGH------LPGKLIVRILNVFDL 1220
+ S + +L ++ +++ + L Y+ L +L+ +L
Sbjct: 942 IPPVIKSLETLLEHLGCLYKFHDRPVTYLYNTLHYYERKLRDRPPLKRRLVSAVLGSLRE 1001
Query: 1221 SKIP---FSESFPQHIS-SSNPVMC--PPLDYFATLLLGLVNNVIPALNYNSKSGSTMDA 1274
+ P SE++ +++ S++ V+ P LDY+ L+ +V
Sbjct: 1002 IRAPGWALSEAYQMYMTRSADDVVTWIPELDYYIRLVRRIVE------------------ 1043
Query: 1275 SLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVS 1334
+ SG ++ F + +P + L +E++++PV+ + + +
Sbjct: 1044 ------------TMSGTAHFPATDWRFNEFPNPAAHA---LYVTCVELMAVPVAPNLVAN 1088
Query: 1335 SLVQIVVN 1342
SL+ +V
Sbjct: 1089 SLLDVVAK 1096
>gi|268570110|ref|XP_002640694.1| C. briggsae CBR-SUR-2 protein [Caenorhabditis briggsae]
Length = 1582
Score = 52.0 bits (123), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 124/307 (40%), Gaps = 28/307 (9%)
Query: 921 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTY 980
+ W EK+ +FP + I + D + L + TT ++ ++ + YV Y
Sbjct: 775 YGWPEKSTTFFPKWALEE-IKKTDVKKLAPNYAEILSTT--DEAFRMNTLLTGGQYVIRY 831
Query: 981 LSHSFPQHRQYLCAGAWILMQ--GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHH 1038
P Y C A I Q PE ++ +V+ + SP+++ M + L+
Sbjct: 832 ADD--PNPITYHCMLAVIFKQLCSKPEQDLTSEYYQVMEKKSPKDIV----VMGNYLVDF 885
Query: 1039 IHVELQRGHSLQDLLFKACANISFFVLTH-ELLPLDILLLALI---DRDDDPH-ALRIVI 1093
I +++ + FK A + + H + D LL+LI D+D ++I
Sbjct: 886 IIADVKNNQDCNEQTFKTIAKTAALMCFHFNIHRADRFLLSLIMHPSTDEDAQICIQIAN 945
Query: 1094 TLLDRQELQQRVKLYCMNRGP-----PEHWL-----YSGLFKRVELQKAL--GNHLSWKE 1141
L + Q+R+K + N P P ++ Y F E + + +
Sbjct: 946 EFLLTPKFQERIKWFYENDVPRKEKDPYEYIKAIVKYHDAFPEFEACQLVPKNDDTGTNV 1005
Query: 1142 RYPTFFDDIAARLLPVIPLIVYRLIENDAMDSADRVLATYSSFLAYYPLRFSFVRDILAY 1201
PT++ + RLLP++ VY +E ++ +L S F Y+P+ F+ +L
Sbjct: 1006 HMPTYYGCLIERLLPILDQYVYVALEQQGYKMSNALLQLVSMFYRYHPMPIHFMYSVLFV 1065
Query: 1202 FYGHLPG 1208
+G + G
Sbjct: 1066 SHGKMAG 1072
>gi|322801416|gb|EFZ22077.1| hypothetical protein SINV_04347 [Solenopsis invicta]
Length = 1357
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 103/527 (19%), Positives = 213/527 (40%), Gaps = 71/527 (13%)
Query: 730 PLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTRLMLLAP-HSLFR 783
PL MS+L +++ + L + + + + A+VETY+RL++ SL
Sbjct: 540 PLSMSILDSLTVHSKMSLIHSIVTHVIKLAQSKSNMALAPALVETYSRLLVYTEIESLGI 599
Query: 784 SLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKIISAL 838
F ++Q P++ G +LE+ +YR+ P YR Q L+ + + +
Sbjct: 600 KGF--ISQLLPTVFKSHAWGTLYTLLEMFSYRMHHIQPHYRVQ-----LLSHLHSLAAVP 652
Query: 839 KVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAI 892
+ + + LRL L + Q F + + S E +E LNR V+ LA
Sbjct: 653 QTNQTQLHLCVESTALRLITGLGSAEVQPQLSRFLSEPKTLVSAE-SEELNRALVLTLAR 711
Query: 893 IIKTRGI-ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQ 951
+ G AD+ + + +L IM + H+W+ TL+ FP +L + + + +
Sbjct: 712 SMHVTGTGADSLSGTWCKELLNTIMQNTPHSWANHTLQCFPPVLSEFF----QQNSVAKE 767
Query: 952 AWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSAN 1011
QQ + V + S + + + + P +LC ++++ + S
Sbjct: 768 NKQQIKKAVEEEYRNWASMNNENDIIAHFSVPGTPP--LFLCLLWKMILET---DRISPI 822
Query: 1012 LLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLP 1071
++L +++++ D L+ + H + K I+ + + ++
Sbjct: 823 AYKILERIGARALSAHLRKFCDYLVFEFANSVGGQH-----VNKCVDTINDMIWKYNIVT 877
Query: 1072 LDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKR 1126
+D L+L L R + + ++ + LL E + RV+ + + PEHW S
Sbjct: 878 IDRLVLCLALRTQEGNEAQVCFFIIQLLLLKAAEFRNRVQEF-VKENSPEHWKQSNWH-- 934
Query: 1127 VELQKALGNHLSWKERY-------------------PTFFDDIAARLLPVIPLIVYRLIE 1167
+K L H + E++ P +F ++ R LPV ++V+R +E
Sbjct: 935 ---EKHLAFHRKFPEKFAPEGIMEQTSGGPSQYQNLPVYFGNVCLRFLPVFDIVVHRYLE 991
Query: 1168 -NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHLPGKLIVR 1213
+ S + +L ++ +++ + L Y+ L + +++
Sbjct: 992 IPPVIKSLEILLEHLGCLYKFHDRPVTYLYNTLHYYEKKLRDRPLLK 1038
>gi|347595793|sp|Q60UZ5.3|MED23_CAEBR RecName: Full=Mediator of RNA polymerase II transcription subunit 23;
AltName: Full=Mediator complex subunit 23; AltName:
Full=Mediator complex subunit sur-2
Length = 1589
Score = 51.6 bits (122), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 124/307 (40%), Gaps = 28/307 (9%)
Query: 921 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTY 980
+ W EK+ +FP + I + D + L + TT ++ ++ + YV Y
Sbjct: 779 YGWPEKSTTFFPKWALEE-IKKTDVKKLAPNYAEILSTT--DEAFRMNTLLTGGQYVIRY 835
Query: 981 LSHSFPQHRQYLCAGAWILMQ--GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHH 1038
P Y C A I Q PE ++ +V+ + SP+++ M + L+
Sbjct: 836 ADD--PNPITYHCMLAVIFKQLCSKPEQDLTSEYYQVMEKKSPKDIV----VMGNYLVDF 889
Query: 1039 IHVELQRGHSLQDLLFKACANISFFVLTH-ELLPLDILLLALI---DRDDDPH-ALRIVI 1093
I +++ + FK A + + H + D LL+LI D+D ++I
Sbjct: 890 IIADVKNNQDCNEQTFKTIAKTAALMCFHFNIHRADRFLLSLIMHPSTDEDAQICIQIAN 949
Query: 1094 TLLDRQELQQRVKLYCMNRGP-----PEHWL-----YSGLFKRVELQKAL--GNHLSWKE 1141
L + Q+R+K + N P P ++ Y F E + + +
Sbjct: 950 EFLLTPKFQERIKWFYENDVPRKEKDPYEYIKAIVKYHDAFPEFEACQLVPKNDDTGTNV 1009
Query: 1142 RYPTFFDDIAARLLPVIPLIVYRLIENDAMDSADRVLATYSSFLAYYPLRFSFVRDILAY 1201
PT++ + RLLP++ VY +E ++ +L S F Y+P+ F+ +L
Sbjct: 1010 HMPTYYGCLIERLLPILDQYVYVALEQQGYKMSNALLQLVSMFYRYHPMPIHFMYSVLFV 1069
Query: 1202 FYGHLPG 1208
+G + G
Sbjct: 1070 SHGKMAG 1076
>gi|355701782|gb|AES01791.1| mediator complex subunit 23 [Mustela putorius furo]
Length = 864
Score = 50.1 bits (118), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 100/493 (20%), Positives = 198/493 (40%), Gaps = 79/493 (16%)
Query: 760 VVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL-- 814
V + A+VETY+RL++ + SL F ++Q P++ G+ +LE+ +YR+
Sbjct: 105 VALAPALVETYSRLLVYMEIESLGIKGF--ISQLLPTVFKSHAWGILHTLLEMFSYRMHH 162
Query: 815 -LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFFS 867
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 163 IQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFL 217
Query: 868 LKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTWS 924
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W+
Sbjct: 218 SDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNWA 276
Query: 925 EKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHS 984
TL FP L+ + + ++ + V + + S + + + +
Sbjct: 277 SHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHFSMQG 332
Query: 985 FPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQ 1044
P +LC +L++ ++IN RVL + +++ T D L++ E
Sbjct: 333 SPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVY----EFS 383
Query: 1045 RGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDR 1098
Q L C I + V + ++ LD L+L L R + + ++ + LL
Sbjct: 384 TSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKP 441
Query: 1099 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------- 1143
+ + RV + + PEHWL + + H+S+ ++Y
Sbjct: 442 NDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMSYHKKYPEKLYFEGLAEQVDP 491
Query: 1144 ---------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFS 1193
P +F ++ R LPV ++++R +E S + +L ++ +
Sbjct: 492 PVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVT 551
Query: 1194 FVRDILAYFYGHL 1206
++ + L Y+ HL
Sbjct: 552 YLYNTLHYYEMHL 564
>gi|149032922|gb|EDL87777.1| cofactor required for Sp1 transcriptional activation, subunit 3,
isoform CRA_b [Rattus norvegicus]
Length = 1047
Score = 49.7 bits (117), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 158/775 (20%), Positives = 303/775 (39%), Gaps = 117/775 (15%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 334 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 392
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 647
+D V +L + E C D N PQS F +C IW ++ + + +N
Sbjct: 393 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDN 443
Query: 648 EQLQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWL 702
+LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 444 SKLQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----L 493
Query: 703 SSAGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG- 757
+ E G+ + P + V PLPM+LL +++ + L + +
Sbjct: 494 PMGALVETIYGNGIMRVPLPGTSCLASASVTPLPMNLLDSLTVHAKMSLIHSIATRVIKL 553
Query: 758 ----GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIV 810
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+
Sbjct: 554 AHTKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMF 611
Query: 811 NYRL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILS 861
++R+ P YR Q L+ + + + + + + LRL L + +
Sbjct: 612 SHRMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQP 666
Query: 862 QRDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMAT 918
Q F + S E +E LNR ++ LA +D+ + + +L+ IM
Sbjct: 667 QFTRFLNDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMTF 725
Query: 919 SQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVK 978
+ H W+ TL FP+ L+ + + ++ + V + + S + + +
Sbjct: 726 TPHNWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIIT 781
Query: 979 TYLSHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLH 1037
+ FP +LC +L++ H I +VL + +++ T D L++
Sbjct: 782 QFSMQGFPP--LFLCLLWKMLLETDHISQIG----YKVLERIGARALVAHVRTFADFLVY 835
Query: 1038 HIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIVITLLD 1097
G L K ++ V + ++ LD L+L L R + +
Sbjct: 836 EFSTS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGN---------- 880
Query: 1098 RQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERYPTFFDDIAARLLPV 1157
E Q+ PE + GL ++V+ + + P +F ++ R LPV
Sbjct: 881 --EAQKY----------PEKLYFEGLAEQVDPPVPIQS-----PYLPIYFGNVCLRFLPV 923
Query: 1158 IPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYF------YGHLPGKL 1210
++++R +E S + +L ++ +++ + L Y+ HL KL
Sbjct: 924 FDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYEMCLRNRDHLKRKL 983
Query: 1211 IVRILNVFDLSKIP---FSESFPQHISSS---NPVMCPPLDYFATLLLGLVNNVI 1259
+ I+ ++ S+++ +H ++ NP + P Y+ L+ LV+N++
Sbjct: 984 VHAIIGSLKDNRPQGWCLSDTYLKHAMNAREDNPWV-PEDSYYCKLIGRLVDNIL 1037
>gi|211826322|gb|AAH05508.2| Med23 protein [Mus musculus]
Length = 695
Score = 49.3 bits (116), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 98/514 (19%), Positives = 198/514 (38%), Gaps = 105/514 (20%)
Query: 879 TETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLL 935
+E LNR ++ LA +D+ + + +L+ IM + H W+ TL FP+ L
Sbjct: 8 SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFTPHNWASHTLSCFPAPL 67
Query: 936 RDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAG 995
+ + + ++ + V + + S + + + + FP +LC
Sbjct: 68 Q----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIITQFSVQGFPP--LFLCLL 121
Query: 996 AWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLF 1054
+L++ H I +VL + +++ T D L++ E Q L
Sbjct: 122 WKMLLETDHISQIG----YKVLERIGARALVAHVRTFADFLVY----EFSTSAGGQQL-- 171
Query: 1055 KACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLY 1108
C I + V + ++ LD L+L L R + + ++ + LL + + RV +
Sbjct: 172 NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVSDF 231
Query: 1109 CMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------------------P 1144
+ PEHWL S + H+S+ ++Y P
Sbjct: 232 -VKENSPEHWLQSDWHTK---------HMSYHKKYPEKLYFEGLAEQVDPPVPIQSPYLP 281
Query: 1145 TFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYF- 1202
+F ++ R LPV ++++R +E S + +L ++ +++ + L Y+
Sbjct: 282 IYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYE 341
Query: 1203 -----YGHLPGKLIVRILNVFDLSKIP---FSESFPQHISSS---NPVMCPPLDYFATLL 1251
HL KL+ I+ ++ S+++ +H ++ NP + P Y+ L+
Sbjct: 342 MCLRNRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKHAMNAREDNPWV-PEDSYYCKLI 400
Query: 1252 LGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYT 1311
LV+ + KSP GP + R F + +P +
Sbjct: 401 GRLVDTMA---------------------GKSP-----GPFPNCDWR--FNEFPNPAAHA 432
Query: 1312 QLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1345
L +E+++L V + ++L+ +V+ QP
Sbjct: 433 ---LHVTCVELMALAVPGKDVGNALLNVVLKSQP 463
>gi|91078526|ref|XP_970233.1| PREDICTED: similar to CRSP complex subunit 3 [Tribolium castaneum]
gi|270004027|gb|EFA00475.1| hypothetical protein TcasGA2_TC003334 [Tribolium castaneum]
Length = 1300
Score = 48.5 bits (114), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 113/570 (19%), Positives = 234/570 (41%), Gaps = 66/570 (11%)
Query: 763 SIAMVETYTRLMLLAP-HSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRLLPLY- 818
S A+VETY+RL++ SL F ++Q P++ G +LE+ +YR+ ++
Sbjct: 551 SPALVETYSRLLVYTEIESLGIKGF--ISQLLPTVYKSHAWGTLYTLLEMFSYRMHHIHP 608
Query: 819 RYQGKTKTLMYDITKIISALKVKRG---DHRVLRLAENLCMNLILSQRDFFSLKREGKGS 875
Y+ + + ++ + + A + + + LRL L + + F + + S
Sbjct: 609 HYRVQLLSHLHSLAAVPQANQTQLHLCVESTALRLITGLGSGEVQPELSRFLAEPKTLIS 668
Query: 876 TEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLL 935
E +E LNR V+ LA G AD + +L I ++ H W+ TL FP
Sbjct: 669 AE-SEELNRALVLTLARATHVTG-ADGS---WCHELLATIAQSTPHAWAPHTLECFPR-- 721
Query: 936 RDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAG 995
AL + + + QQ + V + + S + + + + P +LC
Sbjct: 722 --ALAEFFTQHAVPKENKQQLKKAVEEEYRKWSSMNNENDMMAHFGVAGAPP--LFLCLL 777
Query: 996 AWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFK 1055
+L++ ++I ++L +++++ D L+ H + K
Sbjct: 778 WKMLLET--DHITPIAY-KILERIGARALSAHLRKFCDCLVFEFSNSPGGQH-----VNK 829
Query: 1056 ACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCM 1110
I+ + + ++ +D L+L L R + ++ + LL E + RV+ +
Sbjct: 830 CVDTINDMIWKYNIVTIDRLVLCLALRTQEGSEAQVCSFIIQLVLLKATEFRNRVQDFVK 889
Query: 1111 NRGPPEHWLYSGLF-KRVELQKALGNHLSWKER---YPTFFDDIAARLLPVIPLIVYRLI 1166
+ P +HW + K +E + + +E+ Y +F ++ R LPV ++V+R +
Sbjct: 890 DNSP-DHWNQTNWHEKHLEFHRKYPEKFAPEEQSSGYHPYFGNVCLRFLPVFDIVVHRFL 948
Query: 1167 ENDAMDSADRVLATYSSFLAYYPLR-FSFVRDILAYFYGHLPGKLIVR---ILNVFDLSK 1222
E + + +L + L + R +++ + L Y+ L + ++ + V K
Sbjct: 949 EIPQVTKSLEILLEHLGCLYKFHDRPVTYLYNTLHYYETRLRDRPPLKRRLVAAVLGTLK 1008
Query: 1223 IPFSESFPQHIS-SSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHN 1281
SE + ++ +++ + P LDY+ + +V V+ L G+T ++ + N
Sbjct: 1009 DSLSEPYQLYLGRAADEMWTPELDYY----IQVVKRVVDIL-----GGATANSVIDWRFN 1059
Query: 1282 KSP--------------MTSQSGPSNVSEG 1297
+ P M +GP V+ G
Sbjct: 1060 EFPNAGAHILYTSCVELMALSAGPVAVANG 1089
>gi|384500334|gb|EIE90825.1| hypothetical protein RO3G_15536 [Rhizopus delemar RA 99-880]
Length = 1521
Score = 48.1 bits (113), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 153/363 (42%), Gaps = 51/363 (14%)
Query: 806 VLEIVNYRLLPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILSQRDF 865
+L+++NYR + +Y + L++ I IS L + + R E+ +N+I Q D
Sbjct: 787 ILQLMNYRFIRFLKYSPLSSGLLHYIRYSISFL----DNRQCYRSLESFTVNVINMQMDV 842
Query: 866 FSLK------REGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATS 919
L+ RE +E L R+TV ++ +IKTRG AD + +++++
Sbjct: 843 KLLRSLDDPLREKAIWFGESEMLARLTVGTISRLIKTRGQADIK-----TEQIHRVLSSL 897
Query: 920 QH---TWSEKTLRYFPSLLRDAL--IGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADP 974
WS L +FP ++R + + G+T QQ +T + T LL +
Sbjct: 898 YDFPLEWSPAALAHFPPVVRSFYENVNAEPRAGVTAAKVQQTMSTHKSLTTYLLQGGSAE 957
Query: 975 TYVKTYLSHSFPQHRQYLCAGAWILM--QGHPENINSANLLRVLREFSPEEVTSNIYTMV 1032
+ ++L+ + H C W++ + + + ++ ++L P ++ +++ +V
Sbjct: 958 SEALSFLA-TQENHSCLFCI-LWVIAVSRNTVDCFHMPSVRKMLLMIPPSKMATHVIDLV 1015
Query: 1033 DVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV 1092
D +L ++ + Q LLF + F+ H+ + + +L AL P +
Sbjct: 1016 DFIL-----SVEYPANSQALLFTL---LDGFIWKHQWINFNHVLFALTKGSGTPERTKKA 1067
Query: 1093 IT-----LLDRQELQQRVKLYCMNRGPPEHWLYSGLFKR----VELQKALGNHLSWKERY 1143
+ LL+ +E+ QRV HW G+ R + Q+ L +L Y
Sbjct: 1068 MILLQYLLLESREIAQRV----------HHWESLGISCRPWTEADYQEKLMRYLQKFPEY 1117
Query: 1144 PTF 1146
F
Sbjct: 1118 DEF 1120
>gi|402868278|ref|XP_003898234.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 23, partial [Papio anubis]
Length = 1318
Score = 47.8 bits (112), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 135/624 (21%), Positives = 247/624 (39%), Gaps = 76/624 (12%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 284 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 342
Query: 591 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 649
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 343 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 395
Query: 650 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 705
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 396 LQIPIPHSLRLHHEFLQQSLRNKSLQ---MNDYKIALLCNAYSTNSE--CFT----LPMG 446
Query: 706 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 757
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 447 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 506
Query: 758 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 813
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 507 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 564
Query: 814 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 864
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 565 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 619
Query: 865 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 921
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 620 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 678
Query: 922 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 981
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 679 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 734
Query: 982 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 1041
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 735 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVY---- 785
Query: 1042 ELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1095
E Q L C I + V + ++ LD L+L L R + + ++ + L
Sbjct: 786 EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 843
Query: 1096 LDRQELQQRVKLYCMNRGPPEHWL 1119
L + + RV + + PEHWL
Sbjct: 844 LKPNDFRNRVSDF-VKENSPEHWL 866
>gi|26324494|dbj|BAC26001.1| unnamed protein product [Mus musculus]
Length = 960
Score = 47.4 bits (111), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 158/779 (20%), Positives = 303/779 (38%), Gaps = 115/779 (14%)
Query: 531 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 590
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 247 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 305
Query: 591 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIW-SLNTSTREYLN 646
+D V +L + E C D N PQS F +C IW LN + +
Sbjct: 306 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IWIHLNRKAQNGDS 357
Query: 647 NEQL---QKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLS 703
Q+ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 358 TLQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LP 407
Query: 704 SAGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-- 757
+ E G+ + P + V PLPM+LL +++ + L + +
Sbjct: 408 MGALVETIYGNGIMRVPLPGTSCLASASVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLA 467
Query: 758 ---GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVN 811
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +
Sbjct: 468 HTKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFS 525
Query: 812 YRL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQ 862
+R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 526 HRMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQ 580
Query: 863 RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATS 919
F + S E +E LNR ++ LA +D+ + + +L+ IM +
Sbjct: 581 FTRFLNDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFT 639
Query: 920 QHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKT 979
H W+ TL FP+ L+ + + ++ + V + + S + + +
Sbjct: 640 PHNWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIITQ 695
Query: 980 YLSHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHH 1038
+ FP +LC +L++ H I +VL + +++ T D L++
Sbjct: 696 FSVQGFPP--LFLCLLWKMLLETDHISQIG----YKVLERIGARALVAHVRTFADFLVYE 749
Query: 1039 IHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIVITLLDR 1098
G L K ++ V + ++ LD L+L L R + +
Sbjct: 750 FSTS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGN----------- 793
Query: 1099 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERYPTFFDDIAARLLPVI 1158
E Q+ PE + GL ++V+ + + P +F ++ R LPV
Sbjct: 794 -EAQKY----------PEKLYFEGLAEQVDPPVPIQS-----PYLPIYFGNVCLRFLPVF 837
Query: 1159 PLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYF------YGHLPGKLI 1211
++++R +E S + +L ++ +++ + L Y+ HL KL+
Sbjct: 838 DIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYEMCLRNRDHLKRKLV 897
Query: 1212 VRILNVFDLSKIP---FSESFPQHISSS---NPVMCPPLDYFATLLLGLVNNVIPALNY 1264
I+ ++ S+++ +H ++ NP + P Y+ L+ LV+N++ ++ +
Sbjct: 898 HAIIGSLKDNRPQGWCLSDTYLKHAMNAREDNPWV-PEDSYYCKLIGRLVDNILSSVMF 955
>gi|444728992|gb|ELW69423.1| Mediator of RNA polymerase II transcription subunit 23 [Tupaia
chinensis]
Length = 1186
Score = 46.6 bits (109), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 93/453 (20%), Positives = 182/453 (40%), Gaps = 78/453 (17%)
Query: 760 VVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL-- 814
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 314 VALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMHH 371
Query: 815 -LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFFS 867
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 372 IQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFL 426
Query: 868 LKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTWS 924
+ S E +E LNR ++ LA +D+ + + +L+ IM + H W+
Sbjct: 427 SDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFTPHNWA 485
Query: 925 EKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHS 984
TL FP L+ + + ++ + V + + S S + + +
Sbjct: 486 SHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQG 541
Query: 985 FPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQ 1044
P +LC +L++ ++IN RVL + +++ T D L++ E
Sbjct: 542 SPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVY----EFS 592
Query: 1045 RGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDR 1098
Q L C I + V + ++ LD L+L L R + + ++ + LL
Sbjct: 593 TSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKP 650
Query: 1099 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------- 1143
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 651 NDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVDP 700
Query: 1144 ---------PTFFDDIAARLLPVIPLIVYRLIE 1167
P +F ++ R LPV ++++R +E
Sbjct: 701 PVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLE 733
>gi|308490380|ref|XP_003107382.1| CRE-SUR-2 protein [Caenorhabditis remanei]
gi|308251750|gb|EFO95702.1| CRE-SUR-2 protein [Caenorhabditis remanei]
Length = 1614
Score = 46.6 bits (109), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 125/310 (40%), Gaps = 35/310 (11%)
Query: 921 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPT-YVKT 979
+ W EK+ YFP + +I D L E + T L PS P +V
Sbjct: 780 YGWPEKSTSYFPKWALE-IIKNTDATKLLPNY---EEILTKTRETARLHPSLTPNQFVMR 835
Query: 980 YLSHSFPQHRQYLCAGAWILMQGHPENINS-----ANLLRVLREFSPEEVTSNIYTMVDV 1034
Y P + C A +L + ++S + VL + SP+++ ++D
Sbjct: 836 YGDDQDPT--TFYCMMA-VLFKFAYAAVDSKWDITSEFYEVLEKKSPKDIVVMGNYLIDY 892
Query: 1035 LLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALI----DRDDDPHALR 1090
++ + + + +++ KA A V TH++ D LL+LI + +D ++
Sbjct: 893 IIADVKTQDCNEQTFKNIA-KAAA---VLVFTHQIQRADRFLLSLIMHPGNDEDALICIQ 948
Query: 1091 IVITLLDRQELQQRVKLYCMN----RGPPEHWLYSGL--------FKRVELQKALGNHLS 1138
I + E Q R++ + N P+ ++ + + F+ EL N S
Sbjct: 949 IANEFILTTEFQDRIRWFYQNVPRKDQHPDEYIKAIVKYHDAFPEFEACELVSKYDN--S 1006
Query: 1139 WKERYPTFFDDIAARLLPVIPLIVYRLIENDAMDSADRVLATYSSFLAYYPLRFSFVRDI 1198
PT++ + RLLP++ VY +E +VL T + F Y+ + F+ +
Sbjct: 1007 TNPHMPTYYGCLIERLLPILDQYVYVALEQQGYKMNPQVLQTVAMFYKYHAMPIHFMYSV 1066
Query: 1199 LAYFYGHLPG 1208
L +G + G
Sbjct: 1067 LFTSHGLMSG 1076
>gi|321478574|gb|EFX89531.1| hypothetical protein DAPPUDRAFT_310605 [Daphnia pulex]
Length = 1351
Score = 45.8 bits (107), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 129/671 (19%), Positives = 255/671 (38%), Gaps = 118/671 (17%)
Query: 728 VNPLPMSLLTGFSLNLCLKLALQMEDSIFGG-----QVVASIAMVETYTRLMLLAP-HSL 781
++P+P++ L +++ + L + + V + A+VETY+RL++ SL
Sbjct: 535 ISPIPLAFLDALTVHAKMSLIHSIVTHVIKCAQTKMNVPLAPALVETYSRLLVYTEIESL 594
Query: 782 FRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYR---LLPLYRYQGKTKTLMYDITKIISAL 838
F + S G+ ++E+ +R + P YR Q +T + S
Sbjct: 595 GIKGFITQVMTSVSKSQAWGIFHTLVEMFTFRVHHMQPQYRIQL--------LTLLHSCA 646
Query: 839 KVKRGDHRVLRLAENLCMNLI--LSQRDFFSLKREGKGS-----TEFTETLNRITVIALA 891
++ +++ EN + LI L + + +E LNR ++ LA
Sbjct: 647 VPQQHQTQLILCVENAALRLIGLLGAAEMQPCYSRSAADIKPLFSSDSEELNRALILTLA 706
Query: 892 IIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQ 951
+I G + H + + +L I + H+WS T FP L + G+ + + +
Sbjct: 707 RVISVAG-CETQHSSWYKDLLTLIQQQTPHSWSSNTRDCFPPPLAE-FFGQAANQPVK-E 763
Query: 952 AWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQ---YLCAGAWILMQGHPENIN 1008
+ QQ + + + ++L+ + D + +H PQ +LC L++ E IN
Sbjct: 764 SKQQLKQNIEEEHRKVLTMNPD-----DWPAHFAPQSNNPPFFLCLLWKQLLET--ERIN 816
Query: 1009 SANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANI------SF 1062
+ + + S++ T D L++ +S + C ++ +
Sbjct: 817 PVAY-KCIERIGARGLGSHLRTFCDFLVYEF------ANSGKGQHVNKCIDVLNEMVWQY 869
Query: 1063 FVLTHELLPLDILLLALIDRDDDPHALRIVITLLDRQELQQRVKLYCMNRGPPEHWLYSG 1122
V+T E L L + L L + I + LL + + RV+ + + EHW +
Sbjct: 870 NVVTIERLVLCLALRPLEGNEAQVCCFIIQLLLLKTPQFRSRVQDFVKDNSS-EHWRQNN 928
Query: 1123 LFKRVELQKALGNHLSWKERY-------------------PTFFDDIAARLLPVIPLIVY 1163
+K L + ER+ PT+F ++ R LPV + ++
Sbjct: 929 WH-----EKHLAFQRKFPERFGPPESVLESIGQGGSYQSLPTYFGNVCLRFLPVFDITIH 983
Query: 1164 RLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGH------LPGKLIVRILN 1216
R E S + +L ++ +++ L Y+ L KL+ I+
Sbjct: 984 RFTEIPPVTKSLETILEHLGCLYKFHDRPVTYLYTTLHYYERKLRDRPLLKRKLVSSIMG 1043
Query: 1217 VFDLSKIP---FSESFPQHIS--SSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGST 1271
+ P SES+ + + + + P LDY+ L+ LV+
Sbjct: 1044 SLKDVRPPGWALSESYLNYSTRQADDLNWLPELDYYVKLVGRLVD--------------- 1088
Query: 1272 MDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQ 1331
+ +G S ++ N+ P + TAV E+L+LP S +
Sbjct: 1089 ---------------TTAGRSPFPFPAMDWRFNEFPNASCHALYVTAV-ELLALPASPAI 1132
Query: 1332 IVSSLVQIVVN 1342
+ ++L+ +V+
Sbjct: 1133 VANALMDVVLQ 1143
>gi|4220898|gb|AAD12724.1| transcriptional co-activator CRSP130 [Homo sapiens]
Length = 936
Score = 42.4 bits (98), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 178/433 (41%), Gaps = 59/433 (13%)
Query: 535 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 592
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 392 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 446
Query: 593 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 651
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 447 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 500
Query: 652 ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGV 707
++ + Q S ++ + M+D + + T ++ C T L +
Sbjct: 501 IPIPHSLRLHHEFLQQSLRNK---SLQMNDYKIALLCNAYSTNSE--CFT----LPMGAL 551
Query: 708 TELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 758
E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 552 VETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKS 611
Query: 759 QVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 814
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 612 SVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMH 669
Query: 815 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 866
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 670 HIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRF 724
Query: 867 SLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTW 923
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W
Sbjct: 725 LSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNW 783
Query: 924 SEKTLRYFPSLLR 936
+ TL FP L+
Sbjct: 784 ASHTLSCFPGPLQ 796
>gi|119568436|gb|EAW48051.1| cofactor required for Sp1 transcriptional activation, subunit 3,
130kDa, isoform CRA_c [Homo sapiens]
Length = 892
Score = 41.2 bits (95), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 178/433 (41%), Gaps = 59/433 (13%)
Query: 535 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 592
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 348 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 402
Query: 593 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 651
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 403 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 456
Query: 652 ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGV 707
++ + Q S ++ + M+D + + T ++ C T L +
Sbjct: 457 IPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMGAL 507
Query: 708 TELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 758
E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 508 VETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKS 567
Query: 759 QVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 814
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 568 SVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMH 625
Query: 815 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 866
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 626 HIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRF 680
Query: 867 SLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTW 923
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W
Sbjct: 681 LSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNW 739
Query: 924 SEKTLRYFPSLLR 936
+ TL FP L+
Sbjct: 740 ASHTLSCFPGPLQ 752
>gi|341903729|gb|EGT59664.1| hypothetical protein CAEBREN_16129 [Caenorhabditis brenneri]
Length = 1416
Score = 40.8 bits (94), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 110/264 (41%), Gaps = 34/264 (12%)
Query: 962 NQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSP 1021
NQ ADPT + ++ F A++ + P+ ++ V+ + SP
Sbjct: 722 NQFVSRYGDDADPTTMYCMMAVVF--------RFAYVSLDSKPDI--TSEYYEVMEKKSP 771
Query: 1022 EEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANIS-FFVLTHELLPLDILLLALI 1080
+++ M + L+ +I ++ + + + FK A + + +++L D LL+LI
Sbjct: 772 KDIV----LMGNYLIDYIIADM-KTQDINEQTFKNIAKAAAILIFQYQILRADRFLLSLI 826
Query: 1081 ----DRDDDPHALRIVITLLDRQELQQRVKLYCMNRGP----PEHWLYSGL--------F 1124
+D ++I + QE Q+R++ + N P ++ S + F
Sbjct: 827 MHPGTDEDALLCVQIANEFILTQEFQERIRWFHQNVPKKDQYPTEFIKSIVKYHDNFPEF 886
Query: 1125 KRVELQKALGNHLSWKERYPTFFDDIAARLLPVIPLIVYRLIENDAMDSADRVLATYSSF 1184
+ EL + + S PT++ + RLLP++ VY +E ++L T + F
Sbjct: 887 EACELVRKYDS--SANPHMPTYYGCLIERLLPILDQYVYVALEQQGYKLNPQILQTLALF 944
Query: 1185 LAYYPLRFSFVRDILAYFYGHLPG 1208
Y+ F+ +L +G + G
Sbjct: 945 YKYHAQPIHFMYSVLYISHGKMSG 968
>gi|195383932|ref|XP_002050679.1| GJ20078 [Drosophila virilis]
gi|194145476|gb|EDW61872.1| GJ20078 [Drosophila virilis]
Length = 1566
Score = 40.4 bits (93), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 1324 SLPVSASQIVSSLVQIVVNIQPTLIQT--SNGPYGASNSVGQGSVLPTSPSG-GSTDSLG 1380
S+P SAS + S+L + QPT+ QT ++ P + + G G+ +P S S GST LG
Sbjct: 273 SMPPSASNLGSTLGASTPSQQPTMSQTGSTSSPPASQSGYGLGASMPPSASNLGST--LG 330
Query: 1381 ASRSTP----SVSGINTSSFVSRSGY 1402
ASR+T S SG +S S+SGY
Sbjct: 331 ASRTTQQPTMSQSGSTSSPVASQSGY 356
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,195,044,768
Number of Sequences: 23463169
Number of extensions: 1050868822
Number of successful extensions: 2766153
Number of sequences better than 100.0: 249
Number of HSP's better than 100.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 199
Number of HSP's that attempted gapping in prelim test: 2762600
Number of HSP's gapped (non-prelim): 3323
length of query: 1639
length of database: 8,064,228,071
effective HSP length: 157
effective length of query: 1482
effective length of database: 8,675,477,834
effective search space: 12857058149988
effective search space used: 12857058149988
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 84 (37.0 bits)