Query 000343
Match_columns 1630
No_of_seqs 730 out of 5542
Neff 6.6
Searched_HMMs 29240
Date Tue Mar 26 16:31:41 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000343.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_122-125//hhsearch_pdb/000343hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 1.0 1 1 445.0 38.7 361 466-862 12-372 (437)
2 1n11_A Ankyrin; clathrin, BAND 1.0 1 1 436.7 38.5 357 467-859 46-402 (437)
3 4b9d_A Serine/threonine-protei 1.0 1 1 426.5 24.6 256 133-428 21-280 (350)
4 4fie_A Serine/threonine-protei 1.0 1 1 425.4 27.8 256 135-429 150-405 (423)
5 4fih_A Serine/threonine-protei 1.0 1 1 425.1 26.7 255 136-429 74-328 (346)
6 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 421.3 23.2 253 134-425 30-285 (311)
7 4g3f_A NF-kappa-beta-inducing 1.0 1 1 417.3 23.0 261 136-434 58-319 (336)
8 3ubd_A Ribosomal protein S6 ki 1.0 1 1 409.6 19.7 255 136-428 24-285 (304)
9 4asz_A BDNF/NT-3 growth factor 1.0 1 1 407.1 20.5 264 136-432 13-290 (299)
10 4aoj_A High affinity nerve gro 1.0 1 1 406.8 23.7 264 136-433 41-321 (329)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=1.00 E-value=1 Score=445.05 Aligned_cols=361 Identities=25% Similarity=0.317 Sum_probs=288.5
Q ss_pred CCCCCCCCHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 58987300111038806555421014789987303356330026998299999983999999999981598864578999
Q 000343 466 QDNPNNLHQLVSEGDVSGVRDLLSKNASGNYSSSISSLLKAQNADGQTALHLACRRGSAELVEAILEYSQENVDVLDKDG 545 (1630)
Q Consensus 466 ~~~~t~Lh~Av~~Gdl~~Vk~LL~~~a~~n~~~~i~~ll~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~~gadvn~~d~~G 545 (1630)
....++||.|+..|+++.|+.|++.+++++ ..+..|.||||+||..|+.+++++|++. +++++..+..|
T Consensus 12 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~----------~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g 80 (437)
T 1n11_A 12 ESGLTPLHVASFMGHLPIVKNLLQRGASPN----------VSNVKVETPLHMAARAGHTEVAKYLLQN-KAKVNAKAKDD 80 (437)
T ss_dssp ---CCHHHHHHHHTCHHHHHHHHHTTCCSC----------CSSSCCCCHHHHHHHHTCHHHHHHHHHH-TCCSSCCCTTS
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHCCCCCC----------CCCCCCCCHHHHHHHCCCHHHHHHHHHC-CCCCCCCCCCC
T ss_conf 899888999998789999999998699999----------8888998799999981979999999958-99999879999
Q ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCC
Q ss_conf 99998999829999999999879995433335999619999998299899999998699999878988880003443189
Q 000343 546 DPPLVFALAAGSPECVHALIKRGANVISRLREGFGPSVAHVCAYHGQPDCMRELLLAGADPNAVDDEGESVLHRAVAKKY 625 (1630)
Q Consensus 546 ~TpLh~Aa~~G~~eiVk~LL~~GAdin~~~~d~~G~T~Lh~Aa~~G~~eivk~LL~~GADvN~~d~~G~TpLh~Aa~~g~ 625 (1630)
.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++++++.+..+..|.||||+|+..++
T Consensus 81 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~ 158 (437)
T 1n11_A 81 QTPLHCAARIGHTNMVKLLLENNANPNLA--TTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGK 158 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCTTCC--CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCCCCC--CCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCC
T ss_conf 98999999879899999999679998877--9999859999998599999999996799876779999879999997698
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHH
Q ss_conf 47999999809955320024799968889998099999999997059421102358999976089999984057310249
Q 000343 626 TDCAIVILENGGCRSMAILNSKELTPLHLCVATWNVAVVKRWVEVASPEEIVNVIDIPGPVGTALCMAAALKKDHEVEGR 705 (1630)
Q Consensus 626 ~eivk~LL~~Ga~~di~~~d~~G~TPLh~Aa~~g~~~ivk~LL~~ga~~~~~~~~d~~~~~~t~L~~aaa~~~~~~~~~~ 705 (1630)
.+++++|++.|+ +++..+..|.||||+|+..++.+++++|++.++.... ......++++.++.. ++.
T Consensus 159 ~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-----~~~~g~t~L~~A~~~------~~~ 225 (437)
T 1n11_A 159 VRVAELLLERDA--HPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHS-----PAWNGYTPLHIAAKQ------NQV 225 (437)
T ss_dssp HHHHHHHHHTTC--CTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCC-----CCTTCCCHHHHHHHT------TCH
T ss_pred HHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC-----CCCCCCCHHHHHHHC------CCH
T ss_conf 999999996799--9877789998889999981999999999847999887-----677899889999986------989
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC
Q ss_conf 99999996299998210147600236651598999999998799954356899978899998499999999996999977
Q 000343 706 ELVRILLTAGAEPTAQDAQNRTALHIASMANDVELVKIILDAGVDVNIRNVHNTIPLHVALARGAKSCVGLLLSAGADCN 785 (1630)
Q Consensus 706 eiVklLLe~GADin~~d~~G~TPLH~Aa~~g~~eiVklLL~~GADin~~d~~G~TPLH~Aa~~G~~eiVklLL~~GADvN 785 (1630)
+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|+++|
T Consensus 226 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 305 (437)
T 1n11_A 226 EVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVD 305 (437)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC
T ss_conf 99999997699988879899979999997788999999996699999879999979999998499999999984875678
Q ss_pred CCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 67899992999999842378864999999950899763233789999999996299987479999999956998888
Q 000343 786 WQDDEGDNAFHIAADAAKMIRENLEWLIVMLSHPDAAVEVRNHSGKTLRDFLEGLPREWISEDLMEALMNRGVHLSP 862 (1630)
Q Consensus 786 ~~D~~G~TpLhlAa~~g~~~~~~~e~vi~LL~~~gadin~kN~~GkTpL~lA~~~~~~~~~~~lve~Ll~~Ga~v~~ 862 (1630)
.+|..|+||||+|+..++. .++++|++.|+++|.+|..|.|||++|...+ ..+++++|+++|+++..
T Consensus 306 ~~~~~g~t~L~~A~~~g~~------~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g----~~~iv~~Ll~~ga~~~~ 372 (437)
T 1n11_A 306 ATTRMGYTPLHVASHYGNI------KLVKFLLQHQADVNAKTKLGYSPLHQAAQQG----HTDIVTLLLKNGASPNE 372 (437)
T ss_dssp CCCSSCCCHHHHHHHSSCS------HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT----CHHHHHHHHHTTCCSCC
T ss_pred CCCCCCCCHHHHHHHCCCH------HHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC----HHHHHHHHHHCCCCCCC
T ss_conf 8799998899999986949------9999999669999988999988999999878----19999999977689988
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=1.00 E-value=1 Score=436.74 Aligned_cols=357 Identities=27% Similarity=0.304 Sum_probs=322.0
Q ss_pred CCCCCCCHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 89873001110388065554210147899873033563300269982999999839999999999815988645789999
Q 000343 467 DNPNNLHQLVSEGDVSGVRDLLSKNASGNYSSSISSLLKAQNADGQTALHLACRRGSAELVEAILEYSQENVDVLDKDGD 546 (1630)
Q Consensus 467 ~~~t~Lh~Av~~Gdl~~Vk~LL~~~a~~n~~~~i~~ll~~~d~~G~TpLh~Aa~~G~~eiVk~LL~~~gadvn~~d~~G~ 546 (1630)
...++||.|+..|+.+.++.|++.++++| .++.+|.||||+||..|+.+++++|++. +++++..+..|.
T Consensus 46 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~----------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~ 114 (437)
T 1n11_A 46 KVETPLHMAARAGHTEVAKYLLQNKAKVN----------AKAKDDQTPLHCAARIGHTNMVKLLLEN-NANPNLATTAGH 114 (437)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCSS----------CCCTTSCCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCTTCC
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHCCCCCC----------CCCCCCCCHHHHHHHCCCHHHHHHHHHC-CCCCCCCCCCCC
T ss_conf 99879999998197999999995899999----------8799999899999987989999999967-999887799998
Q ss_pred CHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCH
Q ss_conf 99989998299999999998799954333359996199999982998999999986999998789888800034431894
Q 000343 547 PPLVFALAAGSPECVHALIKRGANVISRLREGFGPSVAHVCAYHGQPDCMRELLLAGADPNAVDDEGESVLHRAVAKKYT 626 (1630)
Q Consensus 547 TpLh~Aa~~G~~eiVk~LL~~GAdin~~~~d~~G~T~Lh~Aa~~G~~eivk~LL~~GADvN~~d~~G~TpLh~Aa~~g~~ 626 (1630)
||||+|+..|+.+++++|++++++.+.. +..|.||||+|+..|+.+++++|+++|+++|..+..|.||||+|+..++.
T Consensus 115 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 192 (437)
T 1n11_A 115 TPLHIAAREGHVETVLALLEKEASQACM--TKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNL 192 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSCCC--CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCH
T ss_pred CHHHHHHHCCCHHHHHHHHHCCCCCCCC--CCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCH
T ss_conf 5999999859999999999679987677--99998799999976989999999967999877789998889999981999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHH
Q ss_conf 79999998099553200247999688899980999999999970594211023589999760899999840573102499
Q 000343 627 DCAIVILENGGCRSMAILNSKELTPLHLCVATWNVAVVKRWVEVASPEEIVNVIDIPGPVGTALCMAAALKKDHEVEGRE 706 (1630)
Q Consensus 627 eivk~LL~~Ga~~di~~~d~~G~TPLh~Aa~~g~~~ivk~LL~~ga~~~~~~~~d~~~~~~t~L~~aaa~~~~~~~~~~e 706 (1630)
+++++|++.|+ +++..+..|.||||+|+..++.++++.|++.++.... . ...+.++++.++.. ++.+
T Consensus 193 ~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~---~--~~~g~t~L~~A~~~------g~~~ 259 (437)
T 1n11_A 193 DIVKLLLPRGG--SPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANA---E--SVQGVTPLHLAAQE------GHAE 259 (437)
T ss_dssp HHHHHHGGGTC--CSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC---C--CTTCCCHHHHHHHT------TCHH
T ss_pred HHHHHHHHCCC--CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC---C--CCCCCCHHHHHHHC------CCHH
T ss_conf 99999984799--9887677899889999986989999999976999888---7--98999799999977------8899
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC
Q ss_conf 99999962999982101476002366515989999999987999543568999788999984999999999969999776
Q 000343 707 LVRILLTAGAEPTAQDAQNRTALHIASMANDVELVKIILDAGVDVNIRNVHNTIPLHVALARGAKSCVGLLLSAGADCNW 786 (1630)
Q Consensus 707 iVklLLe~GADin~~d~~G~TPLH~Aa~~g~~eiVklLL~~GADin~~d~~G~TPLH~Aa~~G~~eiVklLL~~GADvN~ 786 (1630)
++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|+|+|.
T Consensus 260 ~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~ 339 (437)
T 1n11_A 260 MVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNA 339 (437)
T ss_dssp HHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTC
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC
T ss_conf 99999966999998799999799999984999999999848756788799998899999986949999999966999998
Q ss_pred CCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCC
Q ss_conf 7899992999999842378864999999950899763233789999999996299987479999999956998
Q 000343 787 QDDEGDNAFHIAADAAKMIRENLEWLIVMLSHPDAAVEVRNHSGKTLRDFLEGLPREWISEDLMEALMNRGVH 859 (1630)
Q Consensus 787 ~D~~G~TpLhlAa~~g~~~~~~~e~vi~LL~~~gadin~kN~~GkTpL~lA~~~~~~~~~~~lve~Ll~~Ga~ 859 (1630)
+|..|+||||+|++.++ . .++.+|++.|++++.+|.+|+||+++|...+ ...++++|......
T Consensus 340 ~~~~g~t~L~~A~~~g~-----~-~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g----~~~~~~~l~~~~~~ 402 (437)
T 1n11_A 340 KTKLGYSPLHQAAQQGH-----T-DIVTLLLKNGASPNEVSSDGTTPLAIAKRLG----YISVTDVLKVVTDE 402 (437)
T ss_dssp CCTTSCCHHHHHHHTTC-----H-HHHHHHHHTTCCSCCCCSSSCCHHHHHHHTT----CHHHHHHHHHHCCC
T ss_pred CCCCCCCHHHHHHHCCH-----H-HHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC----CHHHHHHHHHCCCC
T ss_conf 89999889999998781-----9-9999999776899887899898999998849----58999999860244
No 3
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=426.49 Aligned_cols=256 Identities=20% Similarity=0.328 Sum_probs=220.9
Q ss_pred CCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCCCC--CHHHHHHHHHHHHHHCCCCCCCCEEEEEE
Q ss_conf 3457828998847678502999527981443668958999996315768--96689999999998115998822167999
Q 000343 133 GVHHDVKLVKKLGEGRRAGVEVWGAWIGGGQGRCRHSVAVKKVMIAEEM--EPDWLSGQLDNLRRASMWCRNVCTFHGVL 210 (1630)
Q Consensus 133 ~~~~~Y~i~k~IG~G~fg~V~l~~~vy~a~~~~~g~~VAIK~i~~~~~~--~~~~~~~Ei~iL~~l~l~HpNIV~L~~~~ 210 (1630)
...++|+++++||+|+||.||+ |+++.+++.||||.+.+.... ..+.+.+|+.+|+.++ |||||+++++|
T Consensus 21 ~sme~Y~~~~~lG~G~fg~V~~------a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~--HpnIV~~~~~~ 92 (350)
T 4b9d_A 21 QSMEKYVRLQKIGEGSFGKAIL------VKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK--HPNIVQYRESF 92 (350)
T ss_dssp SCCCCEEEEEEC------CEEE------EEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCC--CTTBCCEEEEE
T ss_pred CCCCCEEEEEEEECCCCEEEEE------EEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCC--CCCCCCEEEEE
T ss_conf 8512558847970277939999------998899989999998658789799999999999998779--98989199999
Q ss_pred EECCEEEEEEECCCCCHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCEE
Q ss_conf 949979999935899838899870--799999999999999999999999499733202355469878996999402100
Q 000343 211 RMDSCLGLVMDRCYGSVQLAMQRN--EGRLTLEQILRYGADIARGVVELHAAGVVCMNIKPSNLLLDASGRAVVSDYGLA 288 (1630)
Q Consensus 211 ~~~~~~~LVmEy~~gsll~~l~~~--~~~L~~~~~~~Ia~QIl~aL~yLHs~gIIHrDLKP~NILld~~g~vKL~DFGla 288 (1630)
++.+.+|||||||+|+.|..++.. ...+++..++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+|
T Consensus 93 ~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla 172 (350)
T 4b9d_A 93 EENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIA 172 (350)
T ss_dssp EETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEE
T ss_pred EECCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECCCCCEEECCCCCC
T ss_conf 98999999994889983999999738999978999999999999999999899151359789979878999897646521
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 34057534579988897774334444448988789643363211245455676778944201013669998840999998
Q 000343 289 AILKKPACRKARPECDSSRIHSCMDCTMLSPNYTAPEAWEPVKKSLNLFWDDAIGISPESDAWSFGCTLVEMCTGSIPWA 368 (1630)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEil~~~~~~~~~~~~~~~~~s~ksDVWSlGviL~ElltG~~PF~ 368 (1630)
+.+.... ......+||+.|||||++.+.. |+.++|||||||++|||++|.+||.
T Consensus 173 ~~~~~~~--------------~~~~~~~GT~~YmAPE~l~~~~------------y~~~~DiwSlGvilyemltG~~PF~ 226 (350)
T 4b9d_A 173 RVLNSTV--------------ELARACIGTPYYLSPEICENKP------------YNNKSDIWALGCVLYELCTLKHAFE 226 (350)
T ss_dssp SCCCHHH--------------HHHHHHHSCCTTCCHHHHTTCC------------CCHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred EEECCCC--------------CCCCCCCCCCCCCCHHHHCCCC------------CCCHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 4406885--------------4101457883603999987999------------8959999999999999997879989
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 999899999998227899885443578998779999998412595899882257788551
Q 000343 369 GLSAEEIYRAVVKNRKLPPQYASIVGVGIPRELWKMIGECLQFKASKRPTFSAMLATFLR 428 (1630)
Q Consensus 369 ~~~~~ei~~~I~~~~~~~~~~~~~~~~~~s~el~~LI~~cL~~dP~~RPSa~eiL~~L~~ 428 (1630)
+.+..+++..+..+...+ .+..+++++.+||.+||+.||.+|||+.++|+|.+.
T Consensus 227 ~~~~~~~~~~i~~~~~~~------~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~ 280 (350)
T 4b9d_A 227 AGSMKNLVLKIISGSFPP------VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFI 280 (350)
T ss_dssp CSSHHHHHHHHHHTCCCC------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHH
T ss_pred CCCHHHHHHHHHCCCCCC------CCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHH
T ss_conf 969999999998089999------975579999999999855896679089999639976
No 4
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=425.44 Aligned_cols=256 Identities=23% Similarity=0.291 Sum_probs=225.3
Q ss_pred CCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECC
Q ss_conf 57828998847678502999527981443668958999996315768966899999999981159988221679999499
Q 000343 135 HHDVKLVKKLGEGRRAGVEVWGAWIGGGQGRCRHSVAVKKVMIAEEMEPDWLSGQLDNLRRASMWCRNVCTFHGVLRMDS 214 (1630)
Q Consensus 135 ~~~Y~i~k~IG~G~fg~V~l~~~vy~a~~~~~g~~VAIK~i~~~~~~~~~~~~~Ei~iL~~l~l~HpNIV~L~~~~~~~~ 214 (1630)
.+.|++.++||+|+||.||+ |.++.+++.||||++........+.+.+|+.+|+.++ |||||+++++|++.+
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~------a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~--HpnIV~l~~~~~~~~ 221 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCI------ATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ--HENVVEMYNSYLVGD 221 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEE------EEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCC--CTTBCCEEEEEEETT
T ss_pred HHHCEEEEEECCCCCCEEEE------EEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCC--CCCCCCEEEEEEECC
T ss_conf 68438616962481848999------9999999899999986255468999999999998579--989871689999899
Q ss_pred EEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCEEEEECCC
Q ss_conf 79999935899838899870799999999999999999999999499733202355469878996999402100340575
Q 000343 215 CLGLVMDRCYGSVQLAMQRNEGRLTLEQILRYGADIARGVVELHAAGVVCMNIKPSNLLLDASGRAVVSDYGLAAILKKP 294 (1630)
Q Consensus 215 ~~~LVmEy~~gsll~~l~~~~~~L~~~~~~~Ia~QIl~aL~yLHs~gIIHrDLKP~NILld~~g~vKL~DFGla~~~~~~ 294 (1630)
.+|||||||+|++|..++.. +++++..++.|+.||+.||+|||++|||||||||+||||+.++.+||+|||+|+.+...
T Consensus 222 ~~~iVmEy~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~ 300 (423)
T 4fie_A 222 ELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 300 (423)
T ss_dssp EEEEEEECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSS
T ss_pred EEEEEEECCCCCCHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCCCEEEECCCCCEECCCC
T ss_conf 99999969899828988761-69899999999999999999999889044657877789858999898037265477788
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHH
Q ss_conf 34579988897774334444448988789643363211245455676778944201013669998840999998999899
Q 000343 295 ACRKARPECDSSRIHSCMDCTMLSPNYTAPEAWEPVKKSLNLFWDDAIGISPESDAWSFGCTLVEMCTGSIPWAGLSAEE 374 (1630)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEil~~~~~~~~~~~~~~~~~s~ksDVWSlGviL~ElltG~~PF~~~~~~e 374 (1630)
. ......+||+.|||||++.+.. |+.++|||||||++|||++|.+||.+.+..+
T Consensus 301 ~--------------~~~~~~~GTp~YmAPEvl~~~~------------y~~~~DiWSlGvilyeml~G~~PF~~~~~~~ 354 (423)
T 4fie_A 301 V--------------PRRKSLVGTPYWMAPELISRLP------------YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 354 (423)
T ss_dssp C--------------CCBCCCEECTTTCCHHHHTTCC------------BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred C--------------CCCCCCCCCCCCCCHHHHCCCC------------CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH
T ss_conf 7--------------6434666474727999977999------------9968999999999999997879989869999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC
Q ss_conf 9999982278998854435789987799999984125958998822577885510
Q 000343 375 IYRAVVKNRKLPPQYASIVGVGIPRELWKMIGECLQFKASKRPTFSAMLATFLRH 429 (1630)
Q Consensus 375 i~~~I~~~~~~~~~~~~~~~~~~s~el~~LI~~cL~~dP~~RPSa~eiL~~L~~~ 429 (1630)
++..|......... ....+++++++||.+||..||.+|||+.|+|+|.+..
T Consensus 355 ~~~~i~~~~~~~~~----~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~ 405 (423)
T 4fie_A 355 AMKMIRDNLPPRLK----NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLA 405 (423)
T ss_dssp HHHHHHHSCCCCCS----CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGG
T ss_pred HHHHHHCCCCCCCC----CCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHC
T ss_conf 99999727998876----5012999999999998678956890999996098756
No 5
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=425.14 Aligned_cols=255 Identities=23% Similarity=0.291 Sum_probs=224.6
Q ss_pred CCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCE
Q ss_conf 78289988476785029995279814436689589999963157689668999999999811599882216799994997
Q 000343 136 HDVKLVKKLGEGRRAGVEVWGAWIGGGQGRCRHSVAVKKVMIAEEMEPDWLSGQLDNLRRASMWCRNVCTFHGVLRMDSC 215 (1630)
Q Consensus 136 ~~Y~i~k~IG~G~fg~V~l~~~vy~a~~~~~g~~VAIK~i~~~~~~~~~~~~~Ei~iL~~l~l~HpNIV~L~~~~~~~~~ 215 (1630)
+.|++.++||+|+||.||+ |.++.+++.||||++........+.+.+|+.+|+.++ |||||+++++|++.+.
T Consensus 74 ~~y~~~~~iG~G~fG~V~~------a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~--HpnIV~l~~~~~~~~~ 145 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCI------ATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ--HENVVEMYNSYLVGDE 145 (346)
T ss_dssp GTEEEEEEEEECSSCEEEE------EEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCC--CTTBCCEEEEEEETTE
T ss_pred HHCEEEEEEECCCCEEEEE------EEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCC--CCCCCCEEEEEEECCE
T ss_conf 7538707960272829999------9998999899999985276568999999999998679--9899919999998999
Q ss_pred EEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCEEEEECCCC
Q ss_conf 99999358998388998707999999999999999999999994997332023554698789969994021003405753
Q 000343 216 LGLVMDRCYGSVQLAMQRNEGRLTLEQILRYGADIARGVVELHAAGVVCMNIKPSNLLLDASGRAVVSDYGLAAILKKPA 295 (1630)
Q Consensus 216 ~~LVmEy~~gsll~~l~~~~~~L~~~~~~~Ia~QIl~aL~yLHs~gIIHrDLKP~NILld~~g~vKL~DFGla~~~~~~~ 295 (1630)
+|||||||+|++|..++.+ +++++..++.|+.||+.||+|||++|||||||||+|||++.++.+||+|||+|+.+....
T Consensus 146 ~~ivmEy~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 224 (346)
T 4fih_A 146 LWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 224 (346)
T ss_dssp EEEEECCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred EEEEEECCCCCCHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEECCCCCEECCCCC
T ss_conf 9999969899808999871-898999999999999999999998883556278899788799988990275753667887
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHH
Q ss_conf 45799888977743344444489887896433632112454556767789442010136699988409999989998999
Q 000343 296 CRKARPECDSSRIHSCMDCTMLSPNYTAPEAWEPVKKSLNLFWDDAIGISPESDAWSFGCTLVEMCTGSIPWAGLSAEEI 375 (1630)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEil~~~~~~~~~~~~~~~~~s~ksDVWSlGviL~ElltG~~PF~~~~~~ei 375 (1630)
......+||+.|||||++.+.. |+.++||||+||++|||++|.+||.+.+..++
T Consensus 225 --------------~~~~~~~GTp~YmAPEvl~~~~------------y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~ 278 (346)
T 4fih_A 225 --------------PRRKSLVGTPYWMAPELISRLP------------YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 278 (346)
T ss_dssp --------------CCBCCCCSCGGGCCHHHHTTCC------------BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred --------------CCCCCCCCCCCCCCHHHHCCCC------------CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
T ss_conf --------------7534656275827999977999------------99689999999999999978799898599999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC
Q ss_conf 999982278998854435789987799999984125958998822577885510
Q 000343 376 YRAVVKNRKLPPQYASIVGVGIPRELWKMIGECLQFKASKRPTFSAMLATFLRH 429 (1630)
Q Consensus 376 ~~~I~~~~~~~~~~~~~~~~~~s~el~~LI~~cL~~dP~~RPSa~eiL~~L~~~ 429 (1630)
+..|......... .+..+++++++||.+||..||.+|||+.|+|+|.+..
T Consensus 279 ~~~i~~~~~~~~~----~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~ 328 (346)
T 4fih_A 279 MKMIRDNLPPRLK----NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLA 328 (346)
T ss_dssp HHHHHHSSCCCCS----CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGG
T ss_pred HHHHHCCCCCCCC----CCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHC
T ss_conf 9999717999887----5022999999999998679956890999996098656
No 6
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=421.34 Aligned_cols=253 Identities=20% Similarity=0.275 Sum_probs=222.1
Q ss_pred CCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCC---CCCHHHHHHHHHHHHHHCCCCCCCCEEEEEE
Q ss_conf 4578289988476785029995279814436689589999963157---6896689999999998115998822167999
Q 000343 134 VHHDVKLVKKLGEGRRAGVEVWGAWIGGGQGRCRHSVAVKKVMIAE---EMEPDWLSGQLDNLRRASMWCRNVCTFHGVL 210 (1630)
Q Consensus 134 ~~~~Y~i~k~IG~G~fg~V~l~~~vy~a~~~~~g~~VAIK~i~~~~---~~~~~~~~~Ei~iL~~l~l~HpNIV~L~~~~ 210 (1630)
..++|++.+.||+|+||.||+ ++++.+++.||+|.+.+.. ......+.+|+++|+.++ |||||+++++|
T Consensus 30 ~~~dy~i~~~lG~G~fg~V~~------a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~--HpnIv~l~~~~ 101 (311)
T 4aw0_A 30 RPEDFKFGKILGEGSFSTVVL------ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD--HPFFVKLYFTF 101 (311)
T ss_dssp CGGGEEEEEEEEEETTEEEEE------EEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCC--CTTBCCEEEEE
T ss_pred CCCCCEEEEEEECCCCEEEEE------EEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCC--CCCCCEEEEEE
T ss_conf 852368988983164849999------9999999899999988888779789999999999998679--98989199999
Q ss_pred EECCEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCEEEE
Q ss_conf 94997999993589983889987079999999999999999999999949973320235546987899699940210034
Q 000343 211 RMDSCLGLVMDRCYGSVQLAMQRNEGRLTLEQILRYGADIARGVVELHAAGVVCMNIKPSNLLLDASGRAVVSDYGLAAI 290 (1630)
Q Consensus 211 ~~~~~~~LVmEy~~gsll~~l~~~~~~L~~~~~~~Ia~QIl~aL~yLHs~gIIHrDLKP~NILld~~g~vKL~DFGla~~ 290 (1630)
++.+.+|||||||+|+.|..++.+.+.+++..++.|+.||+.||+|||+++|+||||||+|||++.++.+||+|||+|+.
T Consensus 102 ~~~~~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~ 181 (311)
T 4aw0_A 102 QDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV 181 (311)
T ss_dssp ECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EECCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEE
T ss_conf 73898999996489989999998749999999999999999999999988782687878996985898889987687502
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
Q ss_conf 05753457998889777433444444898878964336321124545567677894420101366999884099999899
Q 000343 291 LKKPACRKARPECDSSRIHSCMDCTMLSPNYTAPEAWEPVKKSLNLFWDDAIGISPESDAWSFGCTLVEMCTGSIPWAGL 370 (1630)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEil~~~~~~~~~~~~~~~~~s~ksDVWSlGviL~ElltG~~PF~~~ 370 (1630)
+.... ........+||+.|||||++.+.. |+.++||||+||++|+|++|.+||.+.
T Consensus 182 ~~~~~------------~~~~~~~~~GTp~YmAPEvl~~~~------------y~~~~DiWSlGvilyeml~G~~PF~~~ 237 (311)
T 4aw0_A 182 LSPES------------KQARANSFVGTAQYVSPELLTEKS------------ACKSSDLWALGCIIYQLVAGLPPFRAG 237 (311)
T ss_dssp CCTTT------------TCCCBCCCCSCGGGCCHHHHHHSC------------BCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCCCC------------CCCCCCCCCCCCCCCCHHHHCCCC------------CCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 57787------------765436755680307998976899------------996898998999999997498998997
Q ss_pred CHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 9899999998227899885443578998779999998412595899882257788
Q 000343 371 SAEEIYRAVVKNRKLPPQYASIVGVGIPRELWKMIGECLQFKASKRPTFSAMLAT 425 (1630)
Q Consensus 371 ~~~ei~~~I~~~~~~~~~~~~~~~~~~s~el~~LI~~cL~~dP~~RPSa~eiL~~ 425 (1630)
+..+++..|..+....+ ..+++++++||.+||+.||.+|||+.|++.+
T Consensus 238 ~~~~~~~~i~~~~~~~p-------~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 238 NEGLIFAKIIKLEYDFP-------EKFFPKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp SHHHHHHHHHHTCCCCC-------TTCCHHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred CHHHHHHHHHCCCCCCC-------CCCCHHHHHHHHHHCCCCHHHCCCHHHHCCC
T ss_conf 99999999971999999-------6569999999999762897578096797587
No 7
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=1.00 E-value=1 Score=417.32 Aligned_cols=261 Identities=20% Similarity=0.229 Sum_probs=221.8
Q ss_pred CCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCE
Q ss_conf 78289988476785029995279814436689589999963157689668999999999811599882216799994997
Q 000343 136 HDVKLVKKLGEGRRAGVEVWGAWIGGGQGRCRHSVAVKKVMIAEEMEPDWLSGQLDNLRRASMWCRNVCTFHGVLRMDSC 215 (1630)
Q Consensus 136 ~~Y~i~k~IG~G~fg~V~l~~~vy~a~~~~~g~~VAIK~i~~~~~~~~~~~~~Ei~iL~~l~l~HpNIV~L~~~~~~~~~ 215 (1630)
+.|++.++||+|+||.||+ |+++.+++.||||+++..... .+|+.+|+.++ |||||+++++|++...
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~------a~~~~~g~~vAiK~i~~~~~~-----~~E~~il~~l~--HpnIV~l~~~~~~~~~ 124 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHR------MKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLS--SPRIVPLYGAVREGPW 124 (336)
T ss_dssp TEEEEEEEEEEETTEEEEE------EEETTTCCEEEEEEEETTTCC-----THHHHTTTTCC--CTTBCCEEEEEEETTE
T ss_pred HHEEECCEECCCCCEEEEE------EEECCCCCEEEEEEECHHHHH-----HHHHHHHHHCC--CCCCCCEEEEEEECCE
T ss_conf 3517686851387809999------998899989999997888869-----99999998579--9899939999998999
Q ss_pred EEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCC-CEEEEECCEEEEECCC
Q ss_conf 999993589983889987079999999999999999999999949973320235546987899-6999402100340575
Q 000343 216 LGLVMDRCYGSVQLAMQRNEGRLTLEQILRYGADIARGVVELHAAGVVCMNIKPSNLLLDASG-RAVVSDYGLAAILKKP 294 (1630)
Q Consensus 216 ~~LVmEy~~gsll~~l~~~~~~L~~~~~~~Ia~QIl~aL~yLHs~gIIHrDLKP~NILld~~g-~vKL~DFGla~~~~~~ 294 (1630)
+|||||||+|+.|..++.+.+.+++..++.|+.||+.||+|||+++||||||||+|||++.++ .+||+|||+|+.+...
T Consensus 125 ~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 125 VNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred EEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHEEEECCCCEEEEEECCCCEECCCC
T ss_conf 99999665998699999876999999999999999999999998890426167788799589997999627877685678
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHH
Q ss_conf 34579988897774334444448988789643363211245455676778944201013669998840999998999899
Q 000343 295 ACRKARPECDSSRIHSCMDCTMLSPNYTAPEAWEPVKKSLNLFWDDAIGISPESDAWSFGCTLVEMCTGSIPWAGLSAEE 374 (1630)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEil~~~~~~~~~~~~~~~~~s~ksDVWSlGviL~ElltG~~PF~~~~~~e 374 (1630)
.... ........+||+.|||||++.+.. |+.++|||||||++|||++|.+||.+.+..+
T Consensus 205 ~~~~---------~~~~~~~~~GT~~YmAPE~~~~~~------------y~~~~DiwSlGvilyemltG~~Pf~~~~~~~ 263 (336)
T 4g3f_A 205 GLGK---------SLLTGDYIPGTETHMAPEVVMGKP------------CDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 263 (336)
T ss_dssp ------------------CCCCCCGGGCCHHHHTTCC------------CCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC
T ss_pred CCCC---------CEECCCCCCCCCCCCCHHHHCCCC------------CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH
T ss_conf 7654---------022178545580200899988999------------8908999999999999997869989989999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC
Q ss_conf 999998227899885443578998779999998412595899882257788551025789
Q 000343 375 IYRAVVKNRKLPPQYASIVGVGIPRELWKMIGECLQFKASKRPTFSAMLATFLRHLQELP 434 (1630)
Q Consensus 375 i~~~I~~~~~~~~~~~~~~~~~~s~el~~LI~~cL~~dP~~RPSa~eiL~~L~~~l~~l~ 434 (1630)
++..|........ ..++.+++++.+||.+||+.||.+|||+.|+++++...++...
T Consensus 264 ~~~~i~~~~~~~~----~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~ 319 (336)
T 4g3f_A 264 LCLKIASEPPPIR----EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVG 319 (336)
T ss_dssp CHHHHHHSCCGGG----GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCCCCH----HCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 9999980899800----2586679999999999762897689599999999999975443
No 8
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=1.00 E-value=1 Score=409.59 Aligned_cols=255 Identities=22% Similarity=0.261 Sum_probs=217.1
Q ss_pred CCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCCC--CCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEC
Q ss_conf 782899884767850299952798144366895899999631576--896689999999998115998822167999949
Q 000343 136 HDVKLVKKLGEGRRAGVEVWGAWIGGGQGRCRHSVAVKKVMIAEE--MEPDWLSGQLDNLRRASMWCRNVCTFHGVLRMD 213 (1630)
Q Consensus 136 ~~Y~i~k~IG~G~fg~V~l~~~vy~a~~~~~g~~VAIK~i~~~~~--~~~~~~~~Ei~iL~~l~l~HpNIV~L~~~~~~~ 213 (1630)
++|++++.||+|+||.||+... ..++.+++.||+|.+++... .....+.+|+.+|+.+ +|||||+++++|++.
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~---~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l--~HpnIv~l~~~~~~~ 98 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKK---ISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV--NHPFIVKLHYAFQTE 98 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEE---CSSTTTTCEEEEEEEESEEEEEEECC------CCCCCC--CCTTEECEEEEEEET
T ss_pred CCCEEEEEEECCCCEEEEEEEE---CCCCCCCEEEEEEEEEHHHCCHHHHHHHHHHHHHHHHC--CCCCCCEEEEEEEEC
T ss_conf 5658988972188839999998---55887897999999815776847899999999999877--997999099999989
Q ss_pred CEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCEEEEECC
Q ss_conf 97999993589983889987079999999999999999999999949973320235546987899699940210034057
Q 000343 214 SCLGLVMDRCYGSVQLAMQRNEGRLTLEQILRYGADIARGVVELHAAGVVCMNIKPSNLLLDASGRAVVSDYGLAAILKK 293 (1630)
Q Consensus 214 ~~~~LVmEy~~gsll~~l~~~~~~L~~~~~~~Ia~QIl~aL~yLHs~gIIHrDLKP~NILld~~g~vKL~DFGla~~~~~ 293 (1630)
+.+|||||||+|++|..++.+.+.+++..++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus 99 ~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 99 GKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp TEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred CEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEECCCCCCEECCC
T ss_conf 99999997579988899997559999999999999999999999977995888878995786899887623663433268
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHH
Q ss_conf 53457998889777433444444898878964336321124545567677894420101366999884099999899989
Q 000343 294 PACRKARPECDSSRIHSCMDCTMLSPNYTAPEAWEPVKKSLNLFWDDAIGISPESDAWSFGCTLVEMCTGSIPWAGLSAE 373 (1630)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEil~~~~~~~~~~~~~~~~~s~ksDVWSlGviL~ElltG~~PF~~~~~~ 373 (1630)
.. ......+||+.|||||++.+.. |+.++||||+||++|||++|.+||.+.+..
T Consensus 179 ~~--------------~~~~~~~GT~~YmAPE~~~~~~------------y~~~~DiwSlGvilyemltG~~PF~~~~~~ 232 (304)
T 3ubd_A 179 HE--------------KKAYSFCGTVEYMAPEVVNRRG------------HTQSADWWSFGVLMFEMLTGTLPFQGKDRK 232 (304)
T ss_dssp ----------------CCCCSCCCCGGGCCHHHHHTSC------------CCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred CC--------------CCCCCCCCCCCCCCHHHHCCCC------------CCCCCCCCCHHHHHHHHHHCCCCCCCCCHH
T ss_conf 87--------------6304544181507999965688------------787776361199999998598998984999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHH
Q ss_conf 9999998227899885443578998779999998412595899882-----257788551
Q 000343 374 EIYRAVVKNRKLPPQYASIVGVGIPRELWKMIGECLQFKASKRPTF-----SAMLATFLR 428 (1630)
Q Consensus 374 ei~~~I~~~~~~~~~~~~~~~~~~s~el~~LI~~cL~~dP~~RPSa-----~eiL~~L~~ 428 (1630)
+++..|.+.....+ ..+|+++++||.+||+.||.+|||+ .|+++|.+.
T Consensus 233 ~~~~~i~~~~~~~p-------~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f 285 (304)
T 3ubd_A 233 ETMTMILKAKLGMP-------QFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFF 285 (304)
T ss_dssp HHHHHHHHCCCCCC-------TTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGG
T ss_pred HHHHHHHCCCCCCC-------CCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCC
T ss_conf 99999971899998-------768999999999986469878799986789999769040
No 9
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=1.00 E-value=1 Score=407.07 Aligned_cols=264 Identities=23% Similarity=0.301 Sum_probs=221.5
Q ss_pred CCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCE
Q ss_conf 78289988476785029995279814436689589999963157689668999999999811599882216799994997
Q 000343 136 HDVKLVKKLGEGRRAGVEVWGAWIGGGQGRCRHSVAVKKVMIAEEMEPDWLSGQLDNLRRASMWCRNVCTFHGVLRMDSC 215 (1630)
Q Consensus 136 ~~Y~i~k~IG~G~fg~V~l~~~vy~a~~~~~g~~VAIK~i~~~~~~~~~~~~~Ei~iL~~l~l~HpNIV~L~~~~~~~~~ 215 (1630)
++|.+.++||+|+||.||+ +..+...+..++..||||+++.........+.+|+++|+.++ |||||++++++.+.+.
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~-a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~--HpnIV~l~g~~~~~~~ 89 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFL-AECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ--HEHIVKFYGVCVEGDP 89 (299)
T ss_dssp GGEEEEEEEEC--CCCEEE-EEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCC--CTTBCCEEEEECSSSS
T ss_pred HHEEEEEEEEECCCCEEEE-EEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CCCCCCEEEEEEECCE
T ss_conf 8929824982078829999-998776667788799999967778589999999999998589--9888628799956998
Q ss_pred EEEEEECCCCCHHHHHHHCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEE
Q ss_conf 99999358998388998707-------------99999999999999999999999499733202355469878996999
Q 000343 216 LGLVMDRCYGSVQLAMQRNE-------------GRLTLEQILRYGADIARGVVELHAAGVVCMNIKPSNLLLDASGRAVV 282 (1630)
Q Consensus 216 ~~LVmEy~~gsll~~l~~~~-------------~~L~~~~~~~Ia~QIl~aL~yLHs~gIIHrDLKP~NILld~~g~vKL 282 (1630)
+|||||||++++|..++.+. ..+++..+..|+.||+.||.|||+++|+||||||+|||++.++.+||
T Consensus 90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEE
T ss_conf 99999858999689999860864211123577788999999999999999999997599046765776389879986898
Q ss_pred EECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 40210034057534579988897774334444448988789643363211245455676778944201013669998840
Q 000343 283 SDYGLAAILKKPACRKARPECDSSRIHSCMDCTMLSPNYTAPEAWEPVKKSLNLFWDDAIGISPESDAWSFGCTLVEMCT 362 (1630)
Q Consensus 283 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEil~~~~~~~~~~~~~~~~~s~ksDVWSlGviL~Ellt 362 (1630)
+|||+|+...... .........||+.|||||++.+.. |+.++|||||||++|||+|
T Consensus 170 ~DFGla~~~~~~~------------~~~~~~~~~gt~~ymAPE~~~~~~------------~~~k~DVwS~Gvvl~Ellt 225 (299)
T 4asz_A 170 GDFGMSRDVYSTD------------YYRVGGHTMLPIRWMPPESIMYRK------------FTTESDVWSLGVVLWEIFT 225 (299)
T ss_dssp CCCSCHHHHTGGG------------CEEETTTEEECGGGCCHHHHHHCC------------CCHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCEECCCCC------------CEEECCCEECCHHHCCHHHHCCCC------------CCCHHHHHHHHHHHHHHHC
T ss_conf 8730010067887------------416647513470103889870799------------9703667788999999980
Q ss_pred -CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC
Q ss_conf -9999989998999999982278998854435789987799999984125958998822577885510257
Q 000343 363 -GSIPWAGLSAEEIYRAVVKNRKLPPQYASIVGVGIPRELWKMIGECLQFKASKRPTFSAMLATFLRHLQE 432 (1630)
Q Consensus 363 -G~~PF~~~~~~ei~~~I~~~~~~~~~~~~~~~~~~s~el~~LI~~cL~~dP~~RPSa~eiL~~L~~~l~~ 432 (1630)
|+.||.+.+..+++..+..+...+. +..+|+++.+||.+||+.||.+|||+.+++..|....+.
T Consensus 226 ~G~~Pf~~~~~~~~~~~i~~~~~~~~------p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 226 YGKQPWYQLSNNEVIECITQGRVLQR------PRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp TTCCTTTTSCHHHHHHHHHHTCCCCC------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHCCCCCCC------CCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHC
T ss_conf 89999999899999999980898899------741439999999997687966892999999999877763
No 10
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=1.00 E-value=1 Score=406.80 Aligned_cols=264 Identities=25% Similarity=0.308 Sum_probs=223.4
Q ss_pred CCEEEEEEECCCCCEEEEEEEEEECC-CCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECC
Q ss_conf 78289988476785029995279814-43668958999996315768966899999999981159988221679999499
Q 000343 136 HDVKLVKKLGEGRRAGVEVWGAWIGG-GQGRCRHSVAVKKVMIAEEMEPDWLSGQLDNLRRASMWCRNVCTFHGVLRMDS 214 (1630)
Q Consensus 136 ~~Y~i~k~IG~G~fg~V~l~~~vy~a-~~~~~g~~VAIK~i~~~~~~~~~~~~~Ei~iL~~l~l~HpNIV~L~~~~~~~~ 214 (1630)
++|.+.++||+|+||.||+ ..+.. .+..++..||||.++.......+.+.+|+++|..++ |||||++++++.+..
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~--a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~--HpnIV~l~g~~~~~~ 116 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFL--AECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ--HQHIVRFFGVCTEGR 116 (329)
T ss_dssp GGEEEEEEEEECSSEEEEE--EEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCC--CTTBCCEEEEECSSS
T ss_pred HHEEEEEEECCCCCCEEEE--EEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CCCCCCEEEEEEECC
T ss_conf 9928877971477848998--998786657789699999977579799999999999998589--989996989999899
Q ss_pred EEEEEEECCCCCHHHHHHHCC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCC
Q ss_conf 799999358998388998707---------------99999999999999999999999499733202355469878996
Q 000343 215 CLGLVMDRCYGSVQLAMQRNE---------------GRLTLEQILRYGADIARGVVELHAAGVVCMNIKPSNLLLDASGR 279 (1630)
Q Consensus 215 ~~~LVmEy~~gsll~~l~~~~---------------~~L~~~~~~~Ia~QIl~aL~yLHs~gIIHrDLKP~NILld~~g~ 279 (1630)
.+|||||||++++|..++.+. +++++..+..|+.||+.||.|||+++||||||||+|||++.++.
T Consensus 117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~ 196 (329)
T 4aoj_A 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLV 196 (329)
T ss_dssp SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTE
T ss_pred EEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHEEECCCCC
T ss_conf 89999982799939999986075410012211245788999999999999999999984088422666676489889996
Q ss_pred EEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 99940210034057534579988897774334444448988789643363211245455676778944201013669998
Q 000343 280 AVVSDYGLAAILKKPACRKARPECDSSRIHSCMDCTMLSPNYTAPEAWEPVKKSLNLFWDDAIGISPESDAWSFGCTLVE 359 (1630)
Q Consensus 280 vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APEil~~~~~~~~~~~~~~~~~s~ksDVWSlGviL~E 359 (1630)
+||+|||+|+...... ........+||+.|||||++.+.. |+.++|||||||++||
T Consensus 197 ~Ki~DFGla~~~~~~~------------~~~~~~~~~gt~~ymAPE~~~~~~------------~~~~sDvwS~Gvvl~E 252 (329)
T 4aoj_A 197 VKIGDFGMSRDIYSTD------------YYRVGGRTMLPIRWMPPESILYRK------------FTTESDVWSFGVVLWE 252 (329)
T ss_dssp EEECCCC----------------------------CCCCGGGCCHHHHTTCC------------CCHHHHHHHHHHHHHH
T ss_pred EEECCCCCCEECCCCC------------CCEECCCCCCCCCCCCHHHHCCCC------------CCCCCCCCCHHHHHHH
T ss_conf 8976660333656787------------530047645565665826544799------------9966300105789999
Q ss_pred HHH-CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC
Q ss_conf 840-99999899989999999822789988544357899877999999841259589988225778855102578
Q 000343 360 MCT-GSIPWAGLSAEEIYRAVVKNRKLPPQYASIVGVGIPRELWKMIGECLQFKASKRPTFSAMLATFLRHLQEL 433 (1630)
Q Consensus 360 llt-G~~PF~~~~~~ei~~~I~~~~~~~~~~~~~~~~~~s~el~~LI~~cL~~dP~~RPSa~eiL~~L~~~l~~l 433 (1630)
|+| |+.||.+.+..+++..+..+...+ .+..+|+++.+||.+||+.||.+|||+.+++++|....+..
T Consensus 253 llt~G~~Pf~~~~~~~~~~~i~~g~~~~------~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 253 IFTYGKQPWYQLSNTEAIDCITQGRELE------RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp HHTTSCCTTCSSCHHHHHHHHHHTCCCC------CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred HHCCCCCCCCCCCHHHHHHHHHCCCCCC------CCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHCC
T ss_conf 9828999999989999999998089899------86446399999999974759657929999999999874588
Done!