Your job contains 1 sequence.
>000346
MEWATVQHLDLRHVGRGDHKPLQPHEAAFHPNQALIAVAIGTYIIEFDTLTGSRIASIDI
NSPVVRMAYSPTSGHAVVAILEDCTIRSCDFDTEQSFVLHSPEKKMESISVDTEVHLALT
PLQPVVFFGFHRRMSVTVVGTVEGGRAPTKIKTDLKKPIVNLACHPRLPVLYVAYADGLI
RAYNIHTYAVHYTLQLDNTIKLLGAGAFAFHPTLEWLFVGDRRGTLLAWDVSIERPSMIG
IIQVGSQPITSVAWLPMLRLLVTLCRDGSLQVWKTRVIINPNRPPMQANFFEPASIESID
IPRILSQQGGEAVYPLPRVRALEVHPRLNLAVLLFANFTGGDNIKNRAAYTREGRKQLFA
VLQSARGSSASVLKEKLSSMGSSGILADHQLQAQLQEHHLKGHSHLTISDIARKAFLYSH
FMEGHAKSAPISRLPLITIFDSKHQLKDIPVCQPFHLELNFFNRENRVLHYPVRAFYVDG
INLVAYNLCSGADSIYRKLYSTIPGTVEYYPKHMVYSKRQQLFLVVYEFSGTTNEVVLYR
ENVDTQLADSKSSTVKGRDAAFIGPNEDQFAILDDDKTGLALYILKGVTLQEAADENNGV
VDHNQSTDTNVGSVQGPLQLMFESEVDRIFSTPIESTLMFACDGDQIGMAKLVQGYRLSA
RAGHYLQTKSEGKKSIKLKVTEVMLKVAWQETQRGYVAGVLTTQRVLIVSADLDILASSS
TKFDKGLPSFRSLLWVGPALLFSTATAISVLGWDGKVRNILSISMPNAVLVGALNDRLLL
ANPTEINPRQKKGIEIKSCLVGLLEPLLIGFATMQQYFEQKLDLSEILYQITSRFDSLRI
TPRSLDILAKGPPVCGDLAVSLSQAGPQFTQVLRGIYAIKALRFSTALSVLKDEFLRSRD
YPKCPPTSQLFHRFRQLGYACIKYGQFDSAKETFEVIADYESILDLFICHLNPSAMRRLA
QRLEEEGANPELRRYCERILRVRSTGWTQGIFANFAAESMVPKGPEWGGGNWEIKTPTNL
KSIPQWELATEVVPYMRTDDGPIPSIISDHVGIYLGSIKGRGTIVEVTEKSLVKDFIPAG
ADNKPNGVHSSSVKSTYNKSKGASDVDSKVGSLMGLETLTIQNTSSAADDEQAKAEEEFK
KTMYGAAADGSSSDEEGTSKTKKLQIRIRDKPIASSAVDVNKIKEATKQFKLGEGLGPPM
RTKSLIPGSQDLGQLSSQPSAAGGDGNITAPASSAPGDLFGTESWVQPASVSKPASAGSS
VGAQGQPIPEDFFQNTIPSLQVAASLPPPGTYLSKYDQVSQGVASGKVAPNQANAPAADS
GLPDGGVPPQIAPQPAIPVESIGLPDGGVPPQSSGQTPFPYQSQVLPAQVPPSTQPLDLS
ALGVPNSGDSGKSPANPASPPTSVRPGQVPRGAAASVCFKTGLAHLEQNQLPDALSCFDE
AFLALAKDHSRGADVKAQATICAQYKIAVTLLQEILRLQKVQGPSAAISAKDEMARLSRH
LGSLPLQTKHRINCIRTAIKRNMEVQNYAYAKQMLELLLSKAPASKQDELRSLIDMCVQR
GLSNKSIDPLEDPSQFCAATLSRLSTIGYDVCDLCGAKFSALSAPGCIICGMGSIKRSDA
LAGPVPTPFG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000346
(1630 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
DICTYBASE|DDB_G0278661 - symbol:DDB_G0278661 "WD40 repeat... 189 7.8e-17 3
DICTYBASE|DDB_G0289571 - symbol:DDB_G0289571 species:4468... 165 1.8e-06 4
FB|FBgn0038642 - symbol:Muc91C "Mucin 91C" species:7227 "... 134 0.00015 1
POMBASE|SPBPJ4664.04 - symbol:SPBPJ4664.04 "coatomer alph... 114 0.00054 3
SGD|S000000064 - symbol:SWD1 "Subunit of the COMPASS (Set... 124 0.00058 1
>DICTYBASE|DDB_G0278661 [details] [associations]
symbol:DDB_G0278661 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0278661 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000023 RefSeq:XP_642289.1
ProteinModelPortal:Q54YB3 EnsemblProtists:DDB0233463 GeneID:8621496
KEGG:ddi:DDB_G0278661 eggNOG:NOG82536 InParanoid:Q54YB3 OMA:FRMAWIS
Uniprot:Q54YB3
Length = 1340
Score = 189 (71.6 bits), Expect = 7.8e-17, Sum P(3) = 7.8e-17
Identities = 130/574 (22%), Positives = 233/574 (40%)
Query: 444 HQLKDIPVCQPFHLELNFFNRENRVLHYPVRAFYVDGINLVAYNLCSGADSIYRKLYSTI 503
H P+ L + FF +YP + DG + +Y +G I +KL T
Sbjct: 576 HLNHSFPLVSKLPLPMGFFFEPENTFNYPSEITFFDGTYVKSYLPLNG---ITKKLIDTP 632
Query: 504 ----------PGTVEYYPK--HMVYSKRQQLFLVVYEFSGTTNEVVLYRENV-DTQ-LAD 549
G E K +++ QLF ++Y+ + L + + D Q L +
Sbjct: 633 IMVNSASGMGSGGGEDISKGKKFLFNNEFQLFALIYDSFSVAAQAQLSKYLIMDLQGLVN 692
Query: 550 SKSSTVKGRDAAFIGPNEDQFAILDDDKTGLALYILKGVTLQEAADENNGVVDHNQSTDT 609
+ G D FIG N+ Q IL GL + K TL + GV S+
Sbjct: 693 QQGD---GSDCVFIGNNQ-QILIL-----GLDGKLAKVATLSK-----QGV-----SSFK 733
Query: 610 NVGSVQGPLQLMFESEVDRIFSTPI--ESTLMFACDGDQ-IGMAKLVQGYRLSARAGHYL 666
N V P + + STP+ +++ C + +K V S + + +
Sbjct: 734 NFTLV--P-------RITSVHSTPLGGNKVVLYFCQEKSCLVFSKNVNQSDPSCKDNYMV 784
Query: 667 QTKSEGKKSI-KLKVTEVMLKVAWQETQRG--YVAGVLTTQRVLIVSADLDILAS--SST 721
+G I +L+ E + ++ WQ + ++ +LT QR++I ++ L I+ S
Sbjct: 785 DI--DGDNGILQLQPNEKVFQIEWQSDPKSSQHICAILTNQRIIITNSRLRIINQIHSPP 842
Query: 722 KFDKGLPS-FRSLLWVGPALLFSTATAISVLGWDGKV--RNILSISMPNAVLVGALNDRL 778
+ S F+S+ W+ LL++T+T + + + I ++S+ +L L DR+
Sbjct: 843 NHHQSTSSYFQSIFWLEWTLLYTTSTHLMYMTLQNNQAPKPISTLSISPIILSTILPDRM 902
Query: 779 LLANPTEINPRQKKGIEIKSCLVGLLEPLLIGFATMQQYFE-QKLDLSEILYQITSRFDS 837
+ P K ++ +G+LE L+IG ++ + + +K LS L I + D
Sbjct: 903 IFGYQGLQVPG-KNETTVRCQAIGILECLIIGLLSLPPFIQYEKKYLSSCLQNIVQKLDY 961
Query: 838 LRITPRSLDILAKGPPVCGDLAVSLS------QAGPQFTQVLRGIYAIKALRFSTALSVL 891
RI+ LD L + DLA SLS Q+ + R + K ++ A L
Sbjct: 962 TRISKHVLDKLRERSFT--DLAYSLSNDMKISQSKQSSLEKFRMAWISK--QYEAANRHL 1017
Query: 892 KDEFLRSRDYPKCPPT-----SQLFHRFRQLGYACIKYGQFDSAKETFEVIADYESILDL 946
EF R T ++L R G C+ G + AK+ F+ ++++ +L +
Sbjct: 1018 SIEFNRISIIKNPNDTEKRQFNKLKENMRDFGRECMNAGHYLLAKDCFQKLSEHIYLLQI 1077
Query: 947 FICHLNPSAMRRLAQRLEEEGANPELRRYCERIL 980
I + ++ + + E G + L C++ L
Sbjct: 1078 SILLNDRDSVIAIKRDAELRGDDHVLLAACDKYL 1111
Score = 134 (52.2 bits), Expect = 7.8e-17, Sum P(3) = 7.8e-17
Identities = 79/324 (24%), Positives = 135/324 (41%)
Query: 29 FHPNQALIAVAIGTYIIEFDTLTGSRIASIDINSPVVRMAYSPT-SGHAV------VAIL 81
FHP ++ AI + +D +T S I + I+ P + + T G+++ +A
Sbjct: 218 FHPKSPILYAAIRNEVHFYDIITKSVIGKLFID-PTETIRHLITLPGNSIQTPTFLLAFT 276
Query: 82 EDCTIRSCDFDTEQ-SFVLHSPEKKMESISVDTEVHLALTPLQPVVFFGFHRRMSVTVVG 140
++ I D +T + ++H + K++ T A P +PV+FF + + VV
Sbjct: 277 QEGVIYLWDPETHKLQTIVH--QLKLDDKRPITCKSAA--PNKPVIFFSKNESKDIVVVD 332
Query: 141 TVEGGRAPTKIKTDLKKPIVNLACHPRLPVLYVAYADGLIRAYNIHTYAVHYTLQ----L 196
G +P K+K KKPI +A HP +L DG ++ ++ +
Sbjct: 333 FHNKGSSPFKLKGH-KKPISAIAHHPAKTILASCSTDGQLKIWDTRNNMSFLNFEEFSSY 391
Query: 197 DNTIKLLGAGAF--AFHPTLEWLFVGDRRG-TLLAWDVSIERPSMI---GIIQVGSQPIT 250
+NT + + + F PT ++L + G TL+ D++ + P + G I G Q I
Sbjct: 392 ENTRNIEHSNHYFLVFEPTGKYLVMTGSSGLTLVYGDLTSQNPQEVIANGFICKG-QNIL 450
Query: 251 SVAWLPMLRLLVTLCRDGS----LQVWKTRVIINPNRPPMQANFFEPASIESI-DIPRIL 305
S+ P L L L S L W+ I N + +Q+ P I I D L
Sbjct: 451 SIVHHPQLPLFFVLSIGPSGYEELSSWE---INNQYKTIVQSPLI-PTFIPEINDSLSYL 506
Query: 306 SQQGGEAVYPLPRVRALEVHPRLN 329
S+ P ++ +HP N
Sbjct: 507 SKYSKPLTIPKFNPVSIVIHPTKN 530
Score = 62 (26.9 bits), Expect = 1.1e-08, Sum P(4) = 1.1e-08
Identities = 28/105 (26%), Positives = 49/105 (46%)
Query: 159 IVNLAC-HPRLPVLYVAYADGLIRAYNIHTYAVHYTLQLD--NTIKLLGA--GAFAFHPT 213
+ N C HP+ P+LY A + + Y+I T +V L +D TI+ L G PT
Sbjct: 212 LFNCLCFHPKSPILYAAIRNE-VHFYDIITKSVIGKLFIDPTETIRHLITLPGNSIQTPT 270
Query: 214 LEWLFVGDRRGTLLAWDVSIER-PSMIGIIQVGSQ-PITSVAWLP 256
+L + G + WD + +++ +++ + PIT + P
Sbjct: 271 --FLLAFTQEGVIYLWDPETHKLQTIVHQLKLDDKRPITCKSAAP 313
Score = 38 (18.4 bits), Expect = 1.1e-08, Sum P(4) = 1.1e-08
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 439 IFDSKHQLKDIPVCQPFH 456
IF SK++ KDI V FH
Sbjct: 318 IFFSKNESKDIVVVD-FH 334
Score = 37 (18.1 bits), Expect = 7.8e-17, Sum P(3) = 7.8e-17
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 1490 AKDEMARLSRHLGSLPLQTKHRINCIRTAIKRNMEVQ 1526
AKD +LS H+ L + AIKR+ E++
Sbjct: 1061 AKDCFQKLSEHIYLLQISILLNDRDSVIAIKRDAELR 1097
>DICTYBASE|DDB_G0289571 [details] [associations]
symbol:DDB_G0289571 species:44689 "Dictyostelium
discoideum" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR002048 InterPro:IPR011992 PROSITE:PS50222 SMART:SM00054
dictyBase:DDB_G0289571 Prosite:PS00018 GO:GO:0005509
Gene3D:1.10.238.10 InterPro:IPR018247 InterPro:IPR015940
PROSITE:PS50030 EMBL:AAFI02000144 RefSeq:XP_636163.1
ProteinModelPortal:Q54HB8 EnsemblProtists:DDB0219460 GeneID:8627208
KEGG:ddi:DDB_G0289571 eggNOG:NOG236924 OMA:DISVPIK Uniprot:Q54HB8
Length = 943
Score = 165 (63.1 bits), Expect = 1.8e-06, Sum P(4) = 1.8e-06
Identities = 53/205 (25%), Positives = 95/205 (46%)
Query: 1386 NSGDSGKSPANPASPPTSVRPGQVPRGAAASVCFKTGLAHLEQNQLPDALSCFDEAFLAL 1445
N D+ S +NP SP + + + K + +E +A+ D+ L
Sbjct: 685 NFTDTASSNSNPTSPISQ------KLNSESIEYMKKCINQMENGNFKEAILDLDQCIKIL 738
Query: 1446 AKDHSRGADV-KAQATICAQYKIAVTLLQEILRLQK-VQGPSAA--ISAKDE-MARLSRH 1500
+ HS + + + C YK+ + LL EI ++K ++ S +S+ E +A LS+
Sbjct: 739 LQVHSNNLSIIQNEINFCVGYKVTLNLLIEIKEIEKKIEQESNKDEVSSYYETIALLSKF 798
Query: 1501 LGSLPLQTKHRINCIRTAIKRNMEVQNYAYAKQMLELLLSKAP--ASKQDELRSL-IDMC 1557
L +PLQT HR+ C + A+K N+ N+ A +++E++L K K+ E + + C
Sbjct: 799 LVDIPLQTNHRLVCAKMAVKYNLISNNFGIAGKLIEIILQKGINLGDKEKEQYEIQLQQC 858
Query: 1558 VQRGLSNKSIDPLEDPSQFCAATLS 1582
+N S+ PS C ++ S
Sbjct: 859 RDNQFNNSSLPMYICPS--CKSSTS 881
Score = 51 (23.0 bits), Expect = 1.8e-06, Sum P(4) = 1.8e-06
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 1149 DGSSS-DEEGTSKTKK--LQIRIRDKPIAS 1175
DG SS D + + K +Q+ IRDKPI S
Sbjct: 496 DGDSSFDSDSDDEVIKPAIQVVIRDKPIES 525
Score = 41 (19.5 bits), Expect = 1.8e-06, Sum P(4) = 1.8e-06
Identities = 10/55 (18%), Positives = 26/55 (47%)
Query: 731 RSLLWVGPALLFSTATAISVLGWDGKVRNILSISMPNAVLVGALNDRLLLANPTE 785
R++ W + S+++A++ G + + + S+ + +LN + PT+
Sbjct: 295 RAIKWKSESNSSSSSSALNQSNGSGNEQVVAAPSVERSTSQSSLNGQTTTTTPTQ 349
Score = 40 (19.1 bits), Expect = 1.8e-06, Sum P(4) = 1.8e-06
Identities = 12/48 (25%), Positives = 20/48 (41%)
Query: 1573 PSQFCAATLSRLSTIGYDVCDLCGAKFS-----ALSAPGCIICGMGSI 1615
P ++C T + + + C+ C + FS +S C C G I
Sbjct: 892 PVRWCFQTFQLIKDLTFLQCNYCYSTFSINQSEVVSKSICPSCNHGII 939
Score = 38 (18.4 bits), Expect = 3.4e-06, Sum P(4) = 3.4e-06
Identities = 6/18 (33%), Positives = 13/18 (72%)
Query: 593 AADENNGVVDHNQSTDTN 610
++D NN + ++N + +TN
Sbjct: 370 SSDLNNNINNNNNNNNTN 387
Score = 37 (18.1 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 10/43 (23%), Positives = 16/43 (37%)
Query: 337 NFTGGDNIKNRAAYTREGRKQLFAVLQSARGSSASVLKEKLSS 379
N +N N K F S+ + S + +KL+S
Sbjct: 664 NINNNNNSNNNNNIINNQNKDNFTDTASSNSNPTSPISQKLNS 706
>FB|FBgn0038642 [details] [associations]
symbol:Muc91C "Mucin 91C" species:7227 "Drosophila
melanogaster" [GO:0005201 "extracellular matrix structural
constituent" evidence=ISM] [GO:0031012 "extracellular matrix"
evidence=ISM] [GO:0022008 "neurogenesis" evidence=IMP]
EMBL:AE014297 GO:GO:0022008 eggNOG:NOG12793 GO:GO:0031012
GO:GO:0005201 GeneTree:ENSGT00700000104744 RefSeq:NP_650744.1
UniGene:Dm.10760 EnsemblMetazoa:FBtr0083687 GeneID:42246
KEGG:dme:Dmel_CG7709 UCSC:CG7709-RA CTD:42246 FlyBase:FBgn0038642
InParanoid:Q9VE45 OMA:GPYPSAP PhylomeDB:Q9VE45 GenomeRNAi:42246
NextBio:827869 ArrayExpress:Q9VE45 Bgee:Q9VE45 Uniprot:Q9VE45
Length = 950
Score = 134 (52.2 bits), Expect = 0.00015, P = 0.00015
Identities = 66/231 (28%), Positives = 88/231 (38%)
Query: 1198 PPMRTKSL-IPGSQDLGQLSSQPSAAGGDGNITAPASSAPGDLFGTESWVQPASVSK--- 1253
PP ++ P S G S PS++ G AP+SS + S+ PA+ S
Sbjct: 255 PPSQSYGAPAPPSSKYGPPKSAPSSSYGAPRPAAPSSSYGAPAPPSSSYGAPAAPSSSYG 314
Query: 1254 -PASAGSSVGAQGQPIPEDFFQNTIPSLQVAASLPPPGTY-LSKYDQVSQGVASGKVAPN 1311
PA+ SS GA P + PS A PP +Y S G + +
Sbjct: 315 APAAPSSSYGAPAAP-SSSYGAPAPPSKSYGAPAPPSSSYGAPAAPSKSYGAPAPPSSSY 373
Query: 1312 QANAPAADS-GLPDXXXXXXXXXXXXXXXESIGLPDGGVPPQSS-GQTPFPYQSQVLPAQ 1369
A AP + S G P +S G P PP SS G P +S PA
Sbjct: 374 GAPAPPSSSYGAP--APPSPSYGAPAPPSKSYGAP---APPSSSYGAPAAPSKSYGAPA- 427
Query: 1370 VPPSTQ---PLD-LSALGVPNSGDSGKSPANPASPPTSVRPGQVPRGAAAS 1416
PPS+ P S+ G P++ S P PA P S G P+ +S
Sbjct: 428 -PPSSSYGAPAPPSSSYGAPSAPSSSYGPPKPAPAPPSSSYGAPPQAPVSS 477
>POMBASE|SPBPJ4664.04 [details] [associations]
symbol:SPBPJ4664.04 "coatomer alpha subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISO] [GO:0030126 "COPI vesicle coat" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBPJ4664.04 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 OMA:PLAADHI InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:NP_595279.1 ProteinModelPortal:Q96WV5
STRING:Q96WV5 EnsemblFungi:SPBPJ4664.04.1 GeneID:2541412
KEGG:spo:SPBPJ4664.04 OrthoDB:EOG40VZXP NextBio:20802518
Uniprot:Q96WV5
Length = 1207
Score = 114 (45.2 bits), Expect = 0.00054, Sum P(3) = 0.00054
Identities = 50/199 (25%), Positives = 85/199 (42%)
Query: 1426 LEQNQLPDALSCFDEA-FLAL---AKDHSRGADVKAQATICAQYKIAVTLLQEILRLQKV 1481
++ N++ +A CF +LAL A ++ A C +Y +A++ E RL +
Sbjct: 1007 VKANKILEAQICFRSIIYLALTTVANSEEEADEISALIDECCRYIVALSCELERRRLGE- 1065
Query: 1482 QGPSAAISAKDEMARLSRHLGSLPLQTKHRINCIRTAIKRNMEVQNYAYAKQMLELLLSK 1541
+ A+ LS + S LQ H I +R AI + +++NY A + LL
Sbjct: 1066 EDTKRALE-------LSYYFASADLQPMHSIIALRLAINASHKLKNYKSASFLGNKLLQL 1118
Query: 1542 APASKQDELRSLIDMCVQRGLSNKSIDPLEDPS---QFCAATLSRL-STIGYDVCDLCGA 1597
A + E + R + + + DP + C TL+ + S +DVC +CGA
Sbjct: 1119 AESGPAAEAANRAITLGDRN-PHDAFEIEYDPHVEMRICPKTLTPVYSGDDFDVCSVCGA 1177
Query: 1598 KF-SALSAPGCIICGMGSI 1615
+ C +C +G I
Sbjct: 1178 VYHKGYVNEVCTVCDVGGI 1196
Score = 75 (31.5 bits), Expect = 0.00054, Sum P(3) = 0.00054
Identities = 20/77 (25%), Positives = 34/77 (44%)
Query: 205 AGAFAFHPTLEWLFVGDRRGTLLAWDVSIERPSMIGIIQVGSQPITSVAWLPMLRLLVTL 264
A AFHPT W+ G + WD + +++ P+ +A+ P L V+
Sbjct: 14 AKGVAFHPTQPWILTSLHNGRIQLWDYRMG--TLLDRFDGHDGPVRGIAFHPTQPLFVSG 71
Query: 265 CRDGSLQVW--KTRVII 279
D + VW K+R ++
Sbjct: 72 GDDYKVNVWNYKSRKLL 88
Score = 44 (20.5 bits), Expect = 0.00054, Sum P(3) = 0.00054
Identities = 10/45 (22%), Positives = 23/45 (51%)
Query: 916 QLGYACIKYGQFDSAKETFEVIADYESILDLFICHLNPSAMRRLA 960
+L + YG A+ TF+ + +E + L++ N ++++A
Sbjct: 683 RLASDAMSYGNHKIAEITFQKLRYFEKLSFLYLITGNAEKLQKMA 727
>SGD|S000000064 [details] [associations]
symbol:SWD1 "Subunit of the COMPASS (Set1C) complex"
species:4932 "Saccharomyces cerevisiae" [GO:0048188 "Set1C/COMPASS
complex" evidence=IPI] [GO:0006348 "chromatin silencing at
telomere" evidence=IMP] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IMP;IDA] [GO:0000723 "telomere
maintenance" evidence=IMP] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000781 "chromosome, telomeric region"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation"
evidence=IMP;IDA] [GO:0005694 "chromosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000064 EMBL:BK006935 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006348
GO:GO:0048188 GO:GO:0051568 GO:GO:0000781 GO:GO:0000723 EMBL:L22015
KO:K14961 GeneTree:ENSGT00530000064100 HOGENOM:HOG000204856
OMA:VNRLQWN OrthoDB:EOG4PP1RS PIR:S40901 RefSeq:NP_009403.1
ProteinModelPortal:P39706 SMR:P39706 DIP:DIP-1753N IntAct:P39706
MINT:MINT-393563 STRING:P39706 PaxDb:P39706 EnsemblFungi:YAR003W
GeneID:851265 KEGG:sce:YAR003W CYGD:YAR003w NextBio:968231
Genevestigator:P39706 GermOnline:YAR003W Uniprot:P39706
Length = 426
Score = 124 (48.7 bits), Expect = 0.00058, P = 0.00058
Identities = 33/102 (32%), Positives = 55/102 (53%)
Query: 195 QLDNTIKL-LGAGAFAFHPTLEWLFVGDRRGTLLAWDVSIERPSMIGIIQVGS--QPITS 251
+L +TI+ L F P ++L +G G L+ +D+ RP + +G+ +PITS
Sbjct: 18 KLTHTIENPLRTECLQFSPCGDYLALGCANGALVIYDMDTFRPICVPGNMLGAHVRPITS 77
Query: 252 VAWLPMLRLLVTLCRDGSLQVWKTRVIINPNRPPMQANFFEP 293
+AW P RLL+T RD S+++W + P++P + F P
Sbjct: 78 IAWSPDGRLLLTSSRDWSIKLWD---LSKPSKPLKEIRFDSP 116
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1630 1585 0.00081 125 3 11 22 0.41 34
40 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 631 (67 KB)
Total size of DFA: 604 KB (2269 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 145.81u 0.11s 145.92t Elapsed: 00:00:06
Total cpu time: 145.81u 0.11s 145.92t Elapsed: 00:00:06
Start: Sat May 11 02:29:27 2013 End: Sat May 11 02:29:33 2013